LOCUS       DASQSL010000001         1098 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_123683, whole genome shotgun sequence.
ACCESSION   DASQSL010000001 DASQSL010000000
VERSION     DASQSL010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123683"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(151..945)
                     /locus_tag="VE844_00005"
     CDS             complement(151..945)
                     /locus_tag="VE844_00005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012412474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HZB99798.1"
                     /translation="MDLQLSGKLALVTGSTAGIGLAIGSTLAGEGATVIINGRSEKRV
                     VEAIENIRQKHPYAKLEALIGDLSKVEAVKRATDSFPHVDILINNLGIYEPKSFEDIA
                     DEDWAAIIETNFMSGVRLSRHYLPTMKAKNWGRIIFISSESAINIPVEMIHYGVTKTM
                     QLALARGLAEFTAGSGVTVNSILPGPTRSEGVEGFVSQMAKSRNVEPSVVEKEFFETV
                     RPSSLLKRFATTEEVAALVAFVASPLSSATNGAALRADGGVVRSII"
BASE COUNT          219 a          340 c          306 g          233 t
ORIGIN      
        1 tagccgcgca tcgcggggcc acgcagcgca cggcggagcg gtggatctga ttggtttcct
       61 ggctgtgatc cagcggatcg actgcgcgca ggcggcttga gtattcagcc agcacgggtg
      121 cgagtgcgcg ctccggtagc gcttcatcga tcaaatgatc gagcgaacaa ctccgccgtc
      181 cgcacggagc gccgctccgt tcgtggcaga ggacagcggg ctggcgacga aggcgaccag
      241 cgcggcgacc tcctcggttg tggcaaaccg tttgagcagc gaactgggac ggacagtttc
      301 gaagaactcc ttctccacca cagacggttc gacgtttcga gacttcgcca tttggctgac
      361 gaacccctcc actccctcgg accgcgtcgg ccccggcaag atggagttga ccgtcacgcc
      421 gctgcccgcc gtgaattccg ccagaccgcg cgccagcgca agttgcatgg tcttcgtgac
      481 gccatagtgg atcatctcaa cgggaatgtt gatggctgat tcgcttgaga tgaaaatgat
      541 cctgccccag ttcttcgctt tcatcgttgg cagataatga cggctcaagc gcacgccgct
      601 catgaaattc gtttcaatga tggccgccca atcttcatcc gctatgtcct caaaggactt
      661 tggttcatag atgccgaggt tattgatcaa aatgtccacg tgaggaaaac tgtcagtggc
      721 tcgcttcacc gcttccactt tgctcagatc accgatgagc gcctccagct tggcataagg
      781 gtgcttctgc cggatgttct cgatagcctc gactacgcgc ttttccgatc gaccgttgat
      841 gatcaccgtc gcgccctcac cggccagggt cgaaccaatc gccagaccga tgcccgcagt
      901 cgagccggtc accagcgcga gcttgccaga tagttgtaag tccatgattg ctcctctcac
      961 agcgacggtc ttatgcccac gtacgtgtgg cataagaccc atgtttcaag tatcagtcat
     1021 tctgcgaccc ggactccgac ctcgtccaaa tgccgcagca agtccgctgg atcctgatag
     1081 acacggtagg caccggca
//
LOCUS       DASQSL010000002         1262 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_137437, whole genome shotgun sequence.
ACCESSION   DASQSL010000002 DASQSL010000000
VERSION     DASQSL010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1262
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137437"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1262)
                     /gene="aceE"
                     /locus_tag="VE844_00010"
     CDS             complement(<1..>1262)
                     /gene="aceE"
                     /locus_tag="VE844_00010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017365765.1"
                     /note="E1 component; part of pyruvate dehydrogenase; forms
                     a complex with DlaT and LpdC; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HZB99799.1"
                     /translation="QRMEECVDGEYQAYKAQGGAYVRERFFGKYPELKAMVANMTDED
                     LWRLNRGGHDPHKIYAAYAAAVKHTGQPTVILAKTVKGYGMGEAGEGQNIIHQQKKIG
                     YEALKAFRDRFQIPITDEQLDEAPFYRPPEDSPERHYITERRKALGGYLPARNRDARP
                     LSIPALSIFEVLLKGTEDREISTTMAFVRALSALLRDPQIGRSIVPIIPDEARTFGME
                     GMFRQYGIYSSVGQLYEPADHDQLLYYREDKQGQILEEGITEAGAFSSWMAAATAYSN
                     HGMPMIPFYIFYSMFGFQRIGDLAWAAGDMQARGFLLGGTAGRTTLAGEGLQHQDGHS
                     HLLASTIPNCISYDPSFAYELAVIIHAGLKRMVERQENVFYYITLMNENYAHPPKPEG
                     IDEAIVKGMYLFKDGGDKTLKVQLLGSG"
BASE COUNT          260 a          364 c          358 g          280 t
ORIGIN      
        1 gcctgaaccc agcaattgta ccttaagcgt cttatcgccc ccgtccttga aaagatacat
       61 acccttcact atcgcttcat ctatcccctc aggtttaggc gggtgggcat agttttcgtt
      121 catgagagtg atgtaataga acacattttc ttgtcgctcg accatgcgtt tgagcccggc
      181 atgaataatg accgcgagct cataggcgaa gctcggatcg taggagatac agtttgggat
      241 ggtggacgcc aggagatggc tgtgaccatc ttgatgttgc aacccttcac ccgcaagcgt
      301 ggttctaccc gcggtgccgc ccaagagaaa accacgcgct tgcatatcgc ccgctgccca
      361 ggccagatcg ccgatacgct gaaaaccgaa catcgaatag aagatataaa aggggatcat
      421 cggcatccca tgattgctat aagcggtggc tgccgccatc caggacgaga aggcgccggc
      481 ctcggtgatc ccctcttcga ggatctggcc ttgcttatcc tcacggtagt agaggagttg
      541 gtcatgatcc gccggctcat acaattggcc gacggaggag tagatcccat actgccggaa
      601 cataccttcc ataccaaatg tacgcgcctc atccgggatg atcggaacga tagagcggcc
      661 gatctggggg tctctcagca aggcgcttaa ggcgcgcacg aaggccatgg tggtcgatat
      721 ctcgcggtcc tcggtgccct tgagcagcac ttcgaagatc gaaagcgctg ggatcgacag
      781 cggccgggca tcgcggttcc gggcgggtag ataacctccg agcgccttgc gccgctcggt
      841 gatataatgc cgctcgggac tgtcttcggg cgggcggtag aagggggcct catcgagctg
      901 ctcgtccgtg atcgggatct ggaagcggtc gcggaaggcc ttgagcgcct cataaccgat
      961 cttcttttgt tgatggatga tattctggcc ttcgcccgcc tcgcccatgc cgtagccttt
     1021 gacggtcttg gccaggatca ccgtcggctg gcccgtatgc ttcaccgccg ctgcataggc
     1081 ggcatagatc ttatgaggat catggccgcc acgattcagc cgccagagat cctcgtcggt
     1141 catgttcgcg accatggcct tgagctctgg atacttgcca aagaaacgct cgcgcacata
     1201 agcaccgccc tgggccttgt aggcttgata ttcaccgtcc acgcactctt ccatgcgttg
     1261 ta
//
LOCUS       DASQSL010000003         1248 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_151186, whole genome shotgun sequence.
ACCESSION   DASQSL010000003 DASQSL010000000
VERSION     DASQSL010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1248
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151186"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            108..278
                     /locus_tag="VE844_00015"
     CDS             108..278
                     /locus_tag="VE844_00015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99800.1"
                     /translation="MPWPPDHQISRTHDALAEKLRHNPIECWKHLTQFLKTMKSSLLE
                     LLEEQELTGERK"
     gene            complement(404..1248)
                     /locus_tag="VE844_00020"
                     /pseudo
     CDS             complement(404..1248)
                     /locus_tag="VE844_00020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020503376.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT          264 a          356 c          349 g          279 t
ORIGIN      
        1 cgggtgaggt tgtgcggtcg ccatatcata gccgcctatt gtaacccagc tttggtgaag
       61 ctcaatagaa ggagccgaac agggcctcac accggcggca cggttctatg ccctggccgc
      121 ctgatcatca aatcagcagg actcacgacg ccctcgctga aaaattgcga cacaacccca
      181 tcgaatgttg gaagcacctg acgcagttcc tcaagaccat gaagagctcg ctgctggagc
      241 tgctcgagga gcaggagctg accggagagc ggaagtaggt gtgccgtggg ttgccctgtg
      301 tcactgtgga aaaacgaggg gtgcgttttg cgacatatcg gttatttttt cggacgagta
      361 catccgaaaa aataaccgat ggctcaattc gcgttcaggg gagctatgtg agtaacagct
      421 caagcaacgc ttgcaacaac gctttacctc gtcgtctgac gttgtgaaca cattcgaaga
      481 atcccaaatg cagcgggagg ttctcctgcg agatgccgcg atgcgggcga agccacgatc
      541 tcaacagaga ccaaaagcct tccatcgtgt tgacgtggac ttcgtgaaag ccatcgccgt
      601 catcatcccg tgcgtattca cccctaccgt gacagatgct cttatgcgtg tagccccatt
      661 gctccaagcg actgtaaatg tcgtattcat ccgtgttcac acacgtaccg ggcgcaattg
      721 tggcttggat cagaggcttg atcgtcacgt gttggacgtt ttccagcatc cggaccacca
      781 cgtcgccacc ccgctggatc atgccgaaga tcggcggttt ctcggtttcg agggtgcccc
      841 gtccgcgtgt gcccctgagc cggcggcgcc gaccgcaacg cccttttttg ccacttcatc
      901 gggcttgcct ttgtggccag cgacgacgta cacctcgtcg cattccactt cgttgctcaa
      961 cgtcggcgac ggtttcttgg cgacaatgcc ttggcgcaac tggcaggtca tctgatggac
     1021 gtccgatgga tgaagatcga gttccttggc aatgtgtgcg tttgctaggt tcactcccat
     1081 ccagtacaga cacaccatcc aaacccgaag cggttgatga tgaccggcaa agatggtgtc
     1141 agtcaagtcg tcgaagcgtc ggctacagga ctggcacaga tcgcgctgac gctcaggttg
     1201 ggtgtcgtcg cggccttggt tcgtgatctc cgaaccctca cacgctgg
//
LOCUS       DASQSL010000004         1265 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_178661, whole genome shotgun sequence.
ACCESSION   DASQSL010000004 DASQSL010000000
VERSION     DASQSL010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1265)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1265)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1265
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178661"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            235..684
                     /locus_tag="VE844_00025"
     CDS             235..684
                     /locus_tag="VE844_00025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99801.1"
                     /translation="MRTATDWGQPCPNPRCSHYSLMNRGNVRAIATYPTQSGRRRIFQ
                     CKGCGEQFSETRGTVFFDLRTVEETVILVLKLLLCKVELTALSFALGVTEGTVLEWLR
                     RAAEKAEEINPHLLREGNVTQGQRAELWNFIARKHTTAAAALTHELA"
     gene            complement(883..>1265)
                     /locus_tag="VE844_00030"
     CDS             complement(883..>1265)
                     /locus_tag="VE844_00030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="DDE transposase family protein"
                     /protein_id="HZB99802.1"
                     /translation="LIDKQTQHVWLSSQRLDPYNVHERCNLGARQRWGIETSLLVEKC
                     QGYHYEHAFSYTWNALKGYHYLMRLAHLVNALTLATKWVASQVRTLGVQAFLRLVRES
                     CAHRWLRREWIEHFRATPWQLRLE"
BASE COUNT          257 a          359 c          375 g          274 t
ORIGIN      
        1 ctgctttgac agaataggcg tgcacccgct catttcgttt gcccgtcagc actagcaagg
       61 catccttcag ctcggcacgc gcgaaagcat ccaggaccag ttcgatattc ttatttcgac
      121 tatcgacggt gctcatccgc taatattttg atatagaaaa ttttgatata gaaaagggcc
      181 tgtattcttc ctatagtgca gagtgtgaaa ccgaactgta gggaggacag acccttgaga
      241 acagccaccg actggggcca gccttgcccc aacccgaggt gtagccatta tagcctgatg
      301 aaccgtggta atgtgagagc gattgctacc tacccgaccc aaagcggtcg gcgtcgcatc
      361 tttcagtgca aggggtgcgg tgaacagttc tctgagaccc gcgggacggt cttctttgat
      421 ctgcgcacgg tggaagagac cgtcatcctc gtgctcaagt tgctgctgtg caaggttgag
      481 ttgacggccc tcagcttcgc gctgggcgtg accgaaggga ctgtcctgga gtggttgcgc
      541 cgcgcggcgg agaaggctga agagatcaac ccgcacctgc tgcgcgaggg gaacgtcacg
      601 cagggtcaac gggccgagtt gtggaacttc atcgcgcgca agcatactac cgccgcggca
      661 gccctgacgc atgagttagc ctaattttct tttttcccaa tggtgacgtg tcgcccgctg
      721 ccctttagcg tgtttcaagc gctagtagcc gccaaaataa taggttacca aggcactgaa
      781 gccccttttt tcaatgccac gacttccgcg gcgcaaagag cccctgccga gacccgtttc
      841 gacgacctcg gtggccgtta gggcggtgcg caggggaggc ggctattcga gtcgcaactg
      901 ccagggcgtg gcccgaaagt gttctatcca ctcacgccgt agccagcgat gcgcgcaact
      961 ctcgcgcacc aagcgcaaaa acgcctgtac gcccagtgtg cgcacttggc tcgccaccca
     1021 tttggtggcc agtgtcaggg cattgaccaa gtgcgccagg cgcatcaggt agtggtaacc
     1081 cttcagcgcg ttccaggtat acgagaaggc gtgttcgtag tggtagccct ggcacttttc
     1141 gaccaggagg ctggtctcga tcccccagcg ttgacgggcg ccaaggttgc agcgctcgtg
     1201 gacgttgtag gggtccaggc gctggctgga tagccacacg tgctgggtct gcttatcgat
     1261 cagct
//
LOCUS       DASQSL010000005         1257 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_68738, whole genome shotgun sequence.
ACCESSION   DASQSL010000005 DASQSL010000000
VERSION     DASQSL010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1257
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68738"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            223..>1257
                     /locus_tag="VE844_00035"
     CDS             223..>1257
                     /locus_tag="VE844_00035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99803.1"
                     /translation="MRKAKDWNQPCPNPVCDQYQRMNQGNISAIATYATQSGTRRIFK
                     CRDCGGTFSETRDTVFFELRTAEEKVMMALKLLLVRVELAAISFVLGVTEETLTEWLR
                     RAALKAEAINAHLLREVHLTHIQLDELWNFIARKCSHALDAQGESLAESDDGRQWIWL
                     SYAPEYRLIVAAFVGPRTFESALHLLRMTAAVVAGVPAFFSDCLSRYLPALVAVYHRL
                     KVFPRTGKPGRPRKPLLEPDPELVYAQLIKQKRKGRLTVLGERVVLGAENLARLGVNI
                     STRLLERPNQTFRHALSPLLRKSRSLCKTRTQMRRRAVFFQTFYNFARPHMSLRTAIP
                     LHERVSKGLIQ"
BASE COUNT          294 a          347 c          353 g          263 t
ORIGIN      
        1 tttgtaagct ttacaatacg ggaggctgcc aaccgcattc gctgctcaat cctattgatg
       61 cttgacaaac tcatgaacca gacatcacgg atagtggcga gaatgtaaag tttacataaa
      121 agctagaaac tctggtactc atccgccaat actttgaaaa atagaagagc caaggctact
      181 gtgggttttc ggcagaaaac catccggtag gagacttggc tcttgagaaa agcgaaagat
      241 tggaatcaac cgtgtccgaa tccagtgtgt gaccagtatc agcgcatgaa ccagggaaac
      301 atcagcgcga ttgcgaccta cgcaacacaa agcggcaccc ggcgcatttt caaatgccgt
      361 gactgtggag ggacgttctc cgagacccgt gacacggtct tctttgagct gcggacggcg
      421 gaagaaaaag tcatgatggc gttaaagctg ctgctggtta gagtcgagct cgcggcgatc
      481 agctttgtgc ttggggttac cgaagaaacc ctgaccgaat ggctgcggcg ggcagcgctc
      541 aaagccgaag cgatcaacgc gcacctgctg cgcgaggtcc acctcaccca catccaactc
      601 gatgagctgt ggaactttat tgcgcgcaag tgtagccacg ccttggatgc acagggagaa
      661 agcctggccg agagtgacga cggacgtcaa tggatctggc tcagttatgc cccggagtat
      721 cgtttgatcg tggcggcctt cgtcggaccc aggacgtttg aaagcgcctt gcacctgctc
      781 cggatgactg ccgccgtggt ggcaggggtc cccgccttct tcagcgattg cttgagcagg
      841 tatctgccgg ccttggtcgc ggtgtatcat cgcctgaagg tgtttccacg cacgggcaag
      901 ccgggccgac cgcgtaagcc cctgcttgag cccgaccccg agttggtcta tgctcagctg
      961 atcaagcaga aaagaaaagg acgactgacc gtcttgggcg agcgggtcgt gctgggcgct
     1021 gagaacttgg cacgcttggg cgtgaacatc agcacccgct tgctcgaacg ccccaatcaa
     1081 accttccgcc acgccttgtc tcccttgctc cgtaagagcc gctccttgtg taagacacgc
     1141 acgcagatga gacggcgcgc cgtctttttt caaaccttct ataactttgc ccgaccccac
     1201 atgagtttga gaacagctat cccgctgcac gagcgggtaa gtaaaggcct gattcaa
//
LOCUS       DASQSL010000006         2222 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_178678, whole genome shotgun sequence.
ACCESSION   DASQSL010000006 DASQSL010000000
VERSION     DASQSL010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2222
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178678"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..385
                     /locus_tag="VE844_00040"
     CDS             <1..385
                     /locus_tag="VE844_00040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HZB99804.1"
                     /translation="LIIIDTAGYADAQANAALQLADLILIPCRASVADLDAIDYTIEQ
                     ARHLSRRSRAAVVLNAAPVRGKIVTDVREALEKRVTVAPVVLCQRAAYANAWIDGRAV
                     QEYEPHGKAAAEIEQLYQWILRDKQ"
     gene            429..665
                     /locus_tag="VE844_00045"
     CDS             429..665
                     /locus_tag="VE844_00045"
                     /inference="COORDINATES: protein motif:HMM:NF042903.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HZB99805.1"
                     /translation="MEKHAKTRQKKIAFLDEPIPPQKAARRPDREDTGLLQVHLPKAT
                     IRALKHLAADEDTTVKALIEKGITHVLTQRGGRT"
     gene            744..1661
                     /locus_tag="VE844_00050"
     CDS             744..1661
                     /locus_tag="VE844_00050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020707041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HZB99806.1"
                     /translation="MANPILVTGAAGRVGGVGCTVTKLLLKQGKAVRAMVRNEDERAQ
                     ALRDMGAEVVVGNLLDLDSMHRVIAGCETMYFGMSVSDAYLAATVNAAAVAKHHGVKA
                     FINMSQMTLSQMSITETTASPQHKLHWLAEQALNWSGLPVVHVRPTVLLEGFFLIFTS
                     DSVRESNQIRLPFGEGKTSPVAVEDVARVVAALLANPQPHIGKIYHLTGPQSENMHFY
                     AQEYSKALGRTIAFQDIPVEPWRDGLLERGLPVHLVNHLATMADLHRAGRYDRMSDDV
                     LTLTGQGPLSVQEFVRTNAATFTASAKEA"
     gene            1669..1752
                     /locus_tag="VE844_00055"
                     /pseudo
     CDS             1669..1752
                     /locus_tag="VE844_00055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014383679.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
     gene            2005..>2222
                     /locus_tag="VE844_00060"
     CDS             2005..>2222
                     /locus_tag="VE844_00060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99807.1"
                     /translation="MVTSSLQLLHALYAIAAKYGKSYCYPSQEKILELLKEHYDISVS
                     RRTLNRWLAFLEGEGYIFRTRRHSRGKDG"
BASE COUNT          532 a          608 c          632 g          450 t
ORIGIN      
        1 tttaataatt attgatacag caggttatgc agatgcacag gcaaacgccg ccctacagct
       61 tgccgacctg attttgatac cctgccgcgc ctccgttgcc gacctcgatg cgattgatta
      121 cacaatagag caagcgcggc atttgagccg ccgtagcaga gccgccgttg tcctcaatgc
      181 tgcccccgtt cgcggtaaga tcgttactga tgtgcgggaa gccctcgaaa agcgcgtaac
      241 cgttgcgccc gttgttttat gtcagcgtgc tgcttatgcc aacgcctgga ttgatggccg
      301 cgctgttcag gaatacgaac cgcacggcaa agccgctgcc gagatcgaac agctttatca
      361 atggatacta agggataagc agtaataccg taataccggt attatattat agaacaggtt
      421 agcctcatat ggaaaaacac gcaaagaccc gccaaaagaa gattgccttt ttagacgagc
      481 caatcccacc gcagaaagcc gcgcgcagac ccgaccgaga ggacacaggg ctattgcaag
      541 tccacttacc caaggccacc attagagcct tgaaacacct tgcagccgat gaagatacaa
      601 ccgtcaaggc tttaatcgaa aaagggataa cccatgtttt gacccagcgc ggggggagga
      661 catgaccaag cagccgtcta tccgcgaggt ggaggctggc gagctggata aagccttgga
      721 aaaaccgcgt gggaggaaaa aacatggcaa atcccattct ggtcaccggc gcggcgggcc
      781 gcgtcggcgg ggtagggtgc acggtcacca aactgctgtt gaagcaaggc aaagcggtgc
      841 gtgcgatggt gcgaaatgaa gacgaacgtg cgcaggcgtt gcgcgacatg ggtgcggagg
      901 tcgtggtcgg caatctgctc gatctcgatt cgatgcatag ggtgattgcc ggctgcgaga
      961 cgatgtactt cggcatgtcg gtttcggatg cctatctggc cgcgacggtc aatgcagcgg
     1021 cggtggcgaa gcatcacggc gtgaaggcgt tcatcaatat gtcgcagatg acgctctcac
     1081 agatgagcat taccgaaacc accgcgagcc cgcagcacaa gctgcactgg ctcgccgagc
     1141 aggcgctgaa ctggtccggt ctgccggtcg tacacgtgcg gccgacagtg cttctcgaag
     1201 gcttcttcct gattttcact tcggattcgg tcagggaatc aaatcagatc agactaccgt
     1261 tcggcgaggg caagacttcg ccggtcgcag tggaagatgt tgcacgtgtg gtcgccgcgc
     1321 tgctcgccaa tccgcagccg cacatcggca agatctatca cctgaccggt ccgcagtccg
     1381 agaacatgca tttctatgca caggagtatt cgaaggcgct tggccgcacg atcgcctttc
     1441 aggacattcc ggtcgagccg tggcgggacg ggctgctcga gcgcggcttg ccagttcacc
     1501 tggtgaacca cctcgcgacg atggccgatc tgcaccgcgc gggacgctac gaccggatgt
     1561 cggacgacgt gctcacgcta acggggcaag ggccgctgag cgtgcaggag ttcgtcagga
     1621 cgaatgcggc gacattcacc gcgtcggcaa aagaggcctg agtgtctgca ttggtgttcc
     1681 agtggctttg ccaacaccga tctggatttg cagctcaaga agcacggcat ccatcagctc
     1741 atcgtcatcg gacgttgcac aatggtgctt ttgctgcccc tgtatgcagg ggtagtacca
     1801 gcgctgctat cacagaaggc catgtagatt tttctttacc ttttatgggg gatagtcaaa
     1861 aataccccct aaagagcgaa agctctttgc aagacctgcc tctcaacagg caagagatac
     1921 acctgggagg atacccaggc ccataaaaac aaagcggccc cggattgctt tgaccgagca
     1981 tatccgaggc ctcggagaat cacgatggtt acgtcatcgc ttcaactcct gcacgcattg
     2041 tacgctatag cagctaagta tgggaagtcc tattgctatc cctcccaaga gaaaatctta
     2101 gagctactta aagagcacta cgatatatca gtctcgagaa gaaccctgaa ccgttggctt
     2161 gccttccttg aaggggaggg ctacatcttc cgcacccgca ggcatagtcg aggcaaagac
     2221 gg
//
LOCUS       DASQSL010000007         4565 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_178683, whole genome shotgun sequence.
ACCESSION   DASQSL010000007 DASQSL010000000
VERSION     DASQSL010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4565)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4565)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4565
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178683"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(609..1610)
                     /locus_tag="VE844_00065"
     CDS             complement(609..1610)
                     /locus_tag="VE844_00065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009769137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HZB99808.1"
                     /translation="MRAMVLTAPGSPLVLQALPSPEPGPDQVLIQVRACGVCRTDLHI
                     AEGELAEPKLPLILGHEIVGTVVGRGSNVERFSLGERVGVPWLGHTCGVCRYCERGAE
                     NLCDRARFTGYQIDGGYAEYVIADQRFCFPLAGTYGDAEAAPLLCAGLIGYRSLRLTG
                     EAERLGIYGFGAAAHIITQVACHQGRKVFAFTRRGDLKAQAFARELGAVWAGDSDVPA
                     PEPLDAAIIFAPIGSLVPLALRSVAKGGRVVCAGIHMSDIPAFPYHILWGERVVRSVA
                     NLTRRDGEEFLALAPQIPIHTQVETFTLEQANAALRCLKHGQVQGAAVLVINDAVLH"
     gene            complement(1678..2865)
                     /gene="hemW"
                     /locus_tag="VE844_00070"
     CDS             complement(1678..2865)
                     /gene="hemW"
                     /locus_tag="VE844_00070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009727439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HZB99809.1"
                     /translation="MYVRELPPLSLYVHLPWCVRKCPYCDFNSREVQGEVPEHAYVAA
                     LLRDLDQHLPAIGDRPIISVFIGGGTPSLFSGEAIALLLDGLRARLPLVPELEITLES
                     NPGTVTASRLQEYRASGVNRLSIGVQSFRNAQLRSIGRIHGREESLTAYQAARAAGFD
                     NVNLDLMFGLPEDHVSGALEDLTTALMLEPDHLSWYQLTIEPNTVFYHRPPPLPDDDA
                     LWAMQQQGQMLLAAHGYAHYEVSAYAREGKRCCHNLNYWEFGDYLGIGAGAHSKITDN
                     RQHTIMRFAKCRHPRAYMKAAGTPAVLAEQQTLEPGQAVVEFMMNALRLKGGFLPLLF
                     IGRTGLPYPLLQPTIKEAVARGLLDCTADVIEPTELGYRYLNELIYLFYQDEAYFTET
                     GSA"
     gene            complement(2876..3523)
                     /gene="rdgB"
                     /locus_tag="VE844_00075"
     CDS             complement(2876..3523)
                     /gene="rdgB"
                     /locus_tag="VE844_00075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006711923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HZB99810.1"
                     /translation="MNLLDRGFQRFSLPPELVLATHNPGKLREIALILSDLAITLLPQ
                     SHFNIGDAEETGFTFVENALIKARHAAVGSNLPAIADDSGLEVDALQGAPGIYSARYA
                     GKGASDRDNLETLLRTLAGVPEPLRTARFHCMIVYLRYPADPAPLLCHGVWEGQLLFE
                     PRGDNGFGYDPIFYVPTHECSAAELVPAVKNQLSHRAQALRQLRRSLAAQYAPHA"
     gene            complement(3520..4236)
                     /gene="rph"
                     /locus_tag="VE844_00080"
     CDS             complement(3520..4236)
                     /gene="rph"
                     /locus_tag="VE844_00080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007146800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004549 - tRNA-specific ribonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HZB99811.1"
                     /translation="MRPSGRAPDELRRIAFTRHFTRHAEGSVLAEYGDTKVVCTATVE
                     NKVPPFLKGTGRGWITAEYGMLPRSSGNRIKREATQGRQGGRTFEIQRLIGRSLRAAV
                     DLRALGEHTVIIDCDVLQADGGTRTASISGGYIALCEAMDGLLSERSIATNPVHGLVA
                     SVSVGIYRGIPILDLDYFEDSEAETDMNIVMNDAGHFIEIQGTAEGHAFRLEELHAML
                     DLAKQGIDRILENQRGVLGI"
     gene            4374..>4565
                     /locus_tag="VE844_00085"
     CDS             4374..>4565
                     /locus_tag="VE844_00085"
                     /inference="COORDINATES: protein motif:HMM:NF015699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HZB99812.1"
                     /translation="MTAFACQTGQGKWSHTSWEIRSVNHRYLEISIRLPEELREIEVD
                     VRECVSGSVHRGKIECVLHY"
BASE COUNT         1019 a         1321 c         1274 g          951 t
ORIGIN      
        1 gtcgatttag tcatatcttc ttactcctag cgtaaatcgt agacactgcg atatccttac
       61 tttactttcg cttcccgaag acgccccctt tctctctaat ctaagataga ccgttaaggg
      121 agatgttgtt tcgcaaggta agcgtggctc ctcatctctt ccagccggct tatagtgcgt
      181 tggaattgtt gggataaacc atgcccctat ataattctcc tgggacccca tcggctgata
      241 caataagctt tacgttgcga tcatagaatt cgtcgacaag ggtaatgaga cgctttagag
      301 catcgttagc tttatcatcc atcttcggta tgttcgagat caatactgtc tgataatact
      361 gagcgatctc gatgtaatcg gcaggtcccc accatccccc gcagatctca tcgaattcaa
      421 accataccac gccatcggcc agacaatcgt ccgcccgttg acttcaatgt cctcaggtcc
      481 tcatagagac gctgagtgtg gcgcatggct gcagcctggg cagagtaata taccgcgtcg
      541 taaatcggct cggtagcttt ctacaggagt catgggagag tcccaagcca aatctttagt
      601 tttaatcttt aatggaggac ggcgtcgttt attaccagca ccgccgcccc ctgcacctga
      661 ccgtgcttga ggcatctgag cgctgcgttg gcctgttcca gggtaaaggt ttcaacctgc
      721 gtgtgaatcg ggatctgcgg tgccagcgct agaaactcct caccatcgcg ccgggtgagg
      781 ttggcaaccg agcggacgac acgctctccc cagaggatat gataaggaaa cgccgggata
      841 tcactcatgt gaatgccggc acagaccacc ctacctccct tcgctacaga ccggagcgcc
      901 aaaggcacca gcgatccgat cggtgcgaag atgatcgcgg catccagcgg ttcaggtgca
      961 ggtacatcgg aatcccccgc ccataccgcg cccagttccc gagcgaaggc ctgggcctta
     1021 agatcgccgc gccgggtgaa ggcaaacacc tttcgtcctt gatggcaggc gacctgggtt
     1081 atgatatgcg ccgcggcacc aaagccatag atgcctagac gctcggcctc gccggtcaga
     1141 cgcaaggaac ggtagccgat cagcccagcg cagagcaggg gcgccgcttc ggcgtcgcca
     1201 taggtgccgg caagggggaa acaaaagcgc tgatcggcga tgacgtattc cgcataaccg
     1261 ccatcgatct ggtagccggt gaagcgcgct cgatcgcaga ggttctccgc gcccctttca
     1321 caataccggc atacaccgca ggtatgaccg agccacggca ccccgacacg ctcaccgagc
     1381 gaaaacctct caacgttgga gcctctgccg accacggtcc cgacgatctc atgaccgagg
     1441 atcaggggta atttgggctc cgccaattca ccttcggcga tatgtagatc ggttcggcag
     1501 accccgcagg cacgcacctg gatcagtacc tggtcagggc caggctcagg cgagggcagt
     1561 gcttgtagga ccagcggaga gcctggggcg gtcagcacca tagcgcgcat ctgtcaatcc
     1621 cctccagacc cccacccctt ccctccccct tcacaagggg gagggaaggg gtgggggtta
     1681 ggcggatccc gtctcagtaa aataggcttc atcttgataa aataaataga taagctcatt
     1741 gagatagcgg tagcctaact ctgtgggctc tatcacgtcc gccgtgcaat cgagtaagcc
     1801 acgcgctaca gcctctttga tcgtgggctg caagagggga tagggtagcc cggtgcggcc
     1861 gataaagagc aggggcaaga accccccttt taaccgaaga gcgttcatca taaactccac
     1921 caccgcttgt ccgggctcta gtgtctgctg ttctgccagg accgccggtg tgccggcggc
     1981 cttcatatac gcgcggggat gccgacattt ggcaaagcgc atgatcgtat gttgccggtt
     2041 atcggtgatc ttgctatggg cacccgcccc gatcccaagg taatctccaa actcccaata
     2101 attgagatta tggcagcacc gctttccctc tcgcgcataa gcggaaacct catagtgcgc
     2161 ataaccatgg gccgcgagca gcatctgtcc ttgctgttgc atcgcccaga gcgcatcatc
     2221 gtcaggcaag gggggtggcc ggtgatagaa cacggtattc ggctcaatgg tcaattggta
     2281 ccaggacagg tgatcgggct cgagcataag cgcggtagtc agatcttcca aagcgccgct
     2341 tacgtggtct tcgggcagcc cgaacatgag atccagattg acgttgtcaa aacccgccgc
     2401 gcgcgcggcc tgataggcgg tcagggactc ctcccgccca tggatacgtc cgatcgagcg
     2461 caattgggcg ttgcggaaac tctgtacccc gatcgacaag cggttcacgc cgctcgcgcg
     2521 gtactcctgt aagcggcttg ccgtcaccgt gccgggattg gactccaagg tgatctcaag
     2581 ctcgggtacc aaaggcaggc gggcgcgcag gccatcgagc aaaagcgcga tcgcctcacc
     2641 ggaaaacagg ctaggcgtgc caccaccgat gaatacactg atgatcggac ggtcaccgat
     2701 cgccggtaag tgctgatcca gatcccgcaa caaggccgct acataggcgt gctcggggac
     2761 ctcgccttga acctcacggg aattgaagtc gcagtaaggg cacttgcgga cacaccaggg
     2821 caggtggaca taaagcgata aaggtggtaa ttctcgaacg tacaaaaggg ctctcctaag
     2881 cgtgaggggc atactgggcc gcgagtgatc gccgcagctg tcgcagggct tgagctcggt
     2941 gactgagttg attctttacc gcggggacaa gctcggcggc ggagcattca tgggtaggta
     3001 cataaaagat gggatcataa ccgaagccgt tatcgcctct tggttcgaat aatagctgtc
     3061 cttcccagac gccatggcag agcaggggag ccggatccgc cgggtatctc aagtacacaa
     3121 tcatacagtg aaaccgcgcg gtccgcagag gctcaggcac ccccgccagg gtgcgtaata
     3181 aggtttcgag gttatcccga tcgctcgccc ccttgcctgc atagcgggcg gagtagatac
     3241 ccggtgcgcc ctgcaaggca tcgacctcaa gccccgaatc atccgcaatc gccggcaggt
     3301 ttgatcccac cgctgcatgg cgtgccttga tcagggcatt ttcaacaaag gtgaaaccgg
     3361 tttcctccgc atcaccaata ttgaagtgag actggggtaa tagggtgatc gcaagatccg
     3421 ataaaatcag ggcgatctcg cgtaattttc cgggattatg agtggcgagc accagttcgg
     3481 gaggcagaga aaaacgctga aatcctcgat ctaggaggtt catattccca atacaccacg
     3541 ctggttttcc aggatgcgat cgataccctg cttggccaga tcgagcatgg catgcagttc
     3601 ctccagccga aaggcatggc cttctgcggt accctggatc tcgatgaaat gcccggcatc
     3661 gttcatgacg atattcatat cggtctcggc ctcgctgtct tcgaagtagt cgaggtccag
     3721 gataggaatg ccccggtaga tccccacgga aaccgaggct accaagccat gcacggggtt
     3781 ggtcgcgatc gatctctcgc taagcaaccc gtccatggcc tcgcagaggg cgatataacc
     3841 gcctgagatc gaggctgtgc gcgtgccgcc atcggcttgg agcacatcgc aatcgatgat
     3901 caccgtatgc tcaccgaggg cacggagatc taccgccgca cgcagcgatc ggccaatgag
     3961 ccgctggatc tcgaacgtgc gaccgccctg cctgccttgg gtcgcttcgc gttttatccg
     4021 gttgccgctc gatcgaggta acataccata ttcggcggtg atccaccctc gtccggtacc
     4081 ctttaaaaaa ggcgggacct tattctccac cgtggccgtg cagaccacct tagtatcccc
     4141 gtactcggcc aaaaccgaac cttcggcatg gcgggtgaaa tgtcgggtaa acgcgatcct
     4201 acgcaattca tccggtgctc taccgcttgg gcgcatattc agttcctttc agggcttgtt
     4261 ttaattccct gctaaacatt atacccggaa tgacactctt tgccttaggc acacacaaag
     4321 cgttactatt gtgcttctag tatgagagag gaatcgaggt gatggtttgc agcatgacag
     4381 cctttgcttg ccagaccggg caagggaagt ggagccatac aagctgggaa atccgctcgg
     4441 tcaatcaccg ctatcttgag atctccatac gcctgcccga ggagttaagg gagatcgaag
     4501 tcgatgtccg cgagtgcgtg agtggctcgg ttcaccgcgg caagatcgag tgcgtgctgc
     4561 actat
//
LOCUS       DASQSL010000008         1157 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_151218, whole genome shotgun sequence.
ACCESSION   DASQSL010000008 DASQSL010000000
VERSION     DASQSL010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1157
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151218"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..294
                     /locus_tag="VE844_00090"
     CDS             <1..294
                     /locus_tag="VE844_00090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99813.1"
                     /translation="TENLNGYSVRVWVSRDENAIEPLSCNLASCDVFANCGASEVESH
                     SGVGQAVLELRVPTSFKGGTYQLNCSLPSFSIIFTYQVREFLPTDGGDAPEEK"
     gene            complement(532..>1157)
                     /locus_tag="VE844_00095"
     CDS             complement(532..>1157)
                     /locus_tag="VE844_00095"
                     /inference="COORDINATES: protein motif:HMM:NF024928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helicase C-terminal domain-containing protein"
                     /protein_id="HZB99814.1"
                     /translation="GEEAKRPYVAGEVVSAVRPIVQDERVLVPTDGYSTILEVVRLPG
                     DHDFDVWELTLDHRDEEILVHVPADWEAYKTAMGDLTRAAQELQRQVKDREKAGFSVP
                     EFLDKERRAAWRAFFEFQHTYADLRSPHSTTVHKSQGSTYQVAFIDLTDIGRNTKSYE
                     LTRLLYVAITRAAQKVFVTGELPARLYACEEFTEPPELSEETTELYA"
BASE COUNT          249 a          327 c          323 g          258 t
ORIGIN      
        1 acagaaaatc tgaacggata ttccgtgcgc gtatgggtaa gccgtgatga aaacgccata
       61 gaaccgctct cttgtaacct tgccagctgt gacgtgtttg caaactgcgg cgccagcgag
      121 gttgagtctc atagcggcgt cggtcaagca gttttggaat tgagagtgcc tactagcttt
      181 aagggcggca cataccagct caactgctct ctcccgagct tttctataat cttcacttat
      241 caggtgcgtg agtttttgcc caccgacggt ggagacgcgc cggaagaaaa atgagcatta
      301 tgacaagaac ggtggttttt gagacaattg cgcgcgagct caaatagcgc gcctacgctc
      361 tcccgcgggc agtgccgcag ttctagacac gtggatgacc tgcgatacga atctggccgg
      421 gggtcaccac cagaaactcg ctgcgctcaa gatcgtcagt tgttctgcaa gcacggtatt
      481 gagttgatcg atcttggttt gcagcttccc tcctgtaggc ccaaaatggc ctcaggcgta
      541 gagctcagtg gtctcttcac tgagctcggg cggctcggtg aattcctcgc aagcatagag
      601 ccgggcaggc aattcacccg tcacgaacac cttctgcgcg gcgcgcgtga tagccacata
      661 gagtagccgg gtaagctcat aactcttggt gttgcggccg atgtcggtca ggtcgataaa
      721 ggctacctgg taggtgctgc cctgggattt gtggacagtc gtagagtgag gggatcggag
      781 atccgcatag gtgtgctgga actcaaagaa agctcgccat gctgcccgcc gttctttgtc
      841 caggaactca ggcacagaaa acccggcctt ctccctatcc ttcacctgcc gctgcaactc
      901 ttgggcagct cgcgtgagat cccccatggc tgtcttgtag gcttcccaat cggcgggaac
      961 gtgcacaagg atctcctcat cgcgatgatc aagggtgagc tcccacacgt caaagtcgtg
     1021 atccccgggt aggcgcacca cttcgaggat cgtgctatag ccatcggtag gtacaagcac
     1081 ccgctcatcc tgcacaatcg gccgtacggc tgaaactacc tcgccggcta catagggccg
     1141 cttggcctcc tcaccca
//
LOCUS       DASQSL010000009         1879 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_178691, whole genome shotgun sequence.
ACCESSION   DASQSL010000009 DASQSL010000000
VERSION     DASQSL010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1879)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1879)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1879
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178691"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..248
                     /locus_tag="VE844_00100"
     CDS             <1..248
                     /locus_tag="VE844_00100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99815.1"
                     /translation="GKQRMVDVAIASQAVWYAARGQTVVLTTGDIDFLPVVELITKTI
                     SGKLILFAYEYGVHEKIAEASSEYWTFESMRNCIEKR"
     gene            complement(299..1768)
                     /locus_tag="VE844_00105"
                     /pseudo
     CDS             complement(299..1768)
                     /locus_tag="VE844_00105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020503586.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3 family transposase"
BASE COUNT          419 a          489 c          560 g          411 t
ORIGIN      
        1 gtggcaagca gcgaatggtg gatgttgcaa tcgcctctca agcagtgtgg tacgccgcgc
       61 gtggtcagac ggttgtgctg actactggcg atatagattt ccttccggtt gttgaactga
      121 ttacaaagac tatttcgggc aagctaatct tgttcgcgta tgagtatgga gtccatgaaa
      181 agattgcaga agcatccagt gagtactgga catttgaaag tatgcgtaat tgcatcgaaa
      241 agcggtagtg cgttctaacg agtaggattt gggccattac aatcaatgga acgaaaaatt
      301 accctaaggc gactagcaag ctctccccat cggggttatt gagcgggcgt aattccccct
      361 tgactaccga ctcggccagg gtgaacgaat agcgccccag tacattaatg tgtttgtggt
      421 gcaaggggga gagccgtact acatcgctag ctttaaccga gtaacccccg gctttgagct
      481 gtttcagtgc cgcttccatg taaattgtat tccagagcac gacagcattc ataaccagtc
      541 ccagtacgcc gagctgatct tcctgcccct cacggtagcg cttgcggatc tcgccgcgct
      601 ggccgtgaca gatcgtgcgg gcgacgccgt ggcgcccttc gccgcggttg agctgggtca
      661 ggatgcgccg acgataattc tcgtcgtcaa tgtaattgag caggtaaagc gttttcggga
      721 tgcggccaag agcggcaata gctaacgtaa aacccgatgg ccgtttcgtg gtcagcagcg
      781 tgcgcaccaa ctcggcggca ttcaccgtac cgagcttcag tgagccggcc acgcgtagca
      841 tgtcattcca atgtcgtctg atccgctcgg tgttgatgcg gtgacgggaa aggtcgttca
      901 gcgcgccgta gtcggcatgc gggtcgatgc gccagaagcg tgcgccaccg atatcggcca
      961 agcgcgggct gaactgataa cccagtagcc agaacaggcc aaagataacg tcactcacac
     1021 ccccggtatc ggccataatc tcagtaggtc tgaggctggt ttgttgctcc aacaacccca
     1081 gcaaaatata gatcgaatcg cgtagcgtgc cggggataac aatgccatgg ataccggtat
     1141 attgatcgga tgtaaagtta tagtaggtga tgccgcgggc atagccgaaa tacttggggt
     1201 ttggcccggc gttaaccgtg cgtaccggga ctacaaagcg cagcccatcg gccgaggcga
     1261 cctctccgcc gccccagcgc cgcgctaacg agagggttgc ctgatagtct accaaccgtg
     1321 cgttggagcg cgttaacgtc tcggcgcgga taaagttctg ctgtatccag ctcagccggt
     1381 tgcgggtcag tgctgaacca tccggtcgga tcaccggttc caagccgatg ttgcaggact
     1441 ctgcgaccag cactgcgcag agactgacgt cgaagtcctc gacccgtgcc tggccttcgc
     1501 tgagatgggt gaactcgtag gcgaatccgg tgcgggcatg gatctccagc agcagctcag
     1561 gcaagtcaat gggcggcagg agagcggcaa cccgttcgcg tagttcaatc aagctcggtg
     1621 gctcgtcgag cttatccaga ccggtcagga tcagattggg ccggcctggc gccggctcga
     1681 tgcgcacggc ggtattggcg ggtagattga tcaccgctcg ccggtatgcg tcgtcgaggt
     1741 ggcgctccag tttgcctagt gctctgtcaa gtttactttg acgggatata taagccaaac
     1801 tttacccgtg gaaaaggtta tccggaaggt ttggttatgg caaagaaata tattgtacgg
     1861 ttaagcgaag aagaacgga
//
LOCUS       DASQSL010000010         1068 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_123775, whole genome shotgun sequence.
ACCESSION   DASQSL010000010 DASQSL010000000
VERSION     DASQSL010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123775"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..242)
                     /locus_tag="VE844_00110"
     CDS             complement(<1..242)
                     /locus_tag="VE844_00110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018302441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HZB99816.1"
                     /translation="MDGTGRDESAQRLVSDFWKGYLTRRGFLAKAAALGLSAAVATGL
                     LGVPTVARRAGAQGSSTEVTPRQWEQGTGWGWGWGG"
     gene            578..>1068
                     /locus_tag="VE844_00115"
     CDS             578..>1068
                     /locus_tag="VE844_00115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011565911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HZB99817.1"
                     /translation="MADVAERSGQIAPELPTKNLPGVEYRDLPEPKSLRRYMGASVIL
                     AATAMGSGELIIWPFITTQVGIGLLWFMAIGFITQFFLNMEIERYTLATGETAVTGFT
                     RFWMPWGIFFILGAILPNAWPGWATSGATVLTFIFEWGEGAKIPIAIIFLVAIGLALT
                     LSPV"
BASE COUNT          209 a          328 c          316 g          215 t
ORIGIN      
        1 tcgccgcccc agccccagcc ccagcccgta ccctgctccc actgcctggg cgtgacctcc
       61 gttgacgaac cctgcgcgcc ggcgcgcctc gccaccgtag gcaccccgag caggcccgtc
      121 gcaactgcag ccgacagccc cagagccgcc gccttggcca aaaatcctcg gcgtgtcaag
      181 taacctttcc agaaatcgct aaccaagcgc tgggcgctct cgtcacggcc ggtaccgtcc
      241 aaggcgaacc ccttttcctc gcttccctac tgagaagaat aacttcccgg gaagcgcgcg
      301 taaacctgaa gcggcttagg agagatcctg cccaggcttt atggaagtca acactcgcgg
      361 gccgcttggt gagcaccaga tcgtccaagg ttttcctccg gcaccgtgac catcttccgc
      421 gcacgagcga aaccggtgtt ggaagcgacc ttcattttat tggcccgagt gcggcgacca
      481 cctcaagcaa ggcggcgaag ggttttgttt tgacgcagag gtagcattac tctagtatgc
      541 ctgggaggag ttatcgggga cttgaggagg agaaaacatg gctgacgtcg cggagagatc
      601 aggccagata gcacctgagc tgcctaccaa gaacctgccg ggggttgagt atcgggatct
      661 gccggagccc aagtcgcttc gaaggtatat gggggcgagc gtgatcctag ccgccacggc
      721 tatggggtcc ggcgagctca taatctggcc ctttatcacc acgcaggtgg ggatagggtt
      781 attgtggttt atggccatag gcttcataac gcagttcttc cttaacatgg agatcgagcg
      841 ctacactctg gcgaccggtg agacagcggt caccggcttt acacgcttct ggatgccctg
      901 gggaatcttc tttatcctgg gggcgatact gccgaacgcc tggcccggct gggcaacgag
      961 cggggccacg gtgttgacgt ttatcttcga gtggggagag ggagctaaga tccccatcgc
     1021 catcatattt ctcgtggcga tcggtctcgc gctaaccctc tccccggt
//
LOCUS       DASQSL010000011         1148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_41301, whole genome shotgun sequence.
ACCESSION   DASQSL010000011 DASQSL010000000
VERSION     DASQSL010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41301"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            211..1089
                     /locus_tag="VE844_00120"
     CDS             211..1089
                     /locus_tag="VE844_00120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002708892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS982 family transposase"
                     /protein_id="HZB99818.1"
                     /translation="MAVDITALYCCLDDFCKVFEDWEAHRLIPSQTTRQRTGKLSRSE
                     MLFIMVLFHLSPFKHFKVFYHYGIGQQHRACFRELPHYDRFVGLMPRLFAPLMVLLHS
                     LSGAQTGIYFADSTKLAVCHNRRIHRHKVFDGLAARGKTSMGWFFGFKLHFVINHKGQ
                     IMAVKITPGNTADSTVLDEMTRHLAGKLYADKGYIGQDLFKTLWQRGLHLITAIRRNM
                     RNYLMPLTDKIMLRKRFVIETVLDTLKSEMGLEHSRHRSPVNAMVHVLSCLVAYAFRP
                     GKPSISLNSKHLQAYP"
BASE COUNT          251 a          363 c          290 g          244 t
ORIGIN      
        1 ccggaaggcg agtttctcaa gccgctgccc gaaggccctc tggcggttga gcgggtcagg
       61 ccttgaaacc ccgatcataa ccggcgcggt actggcgcta aacaacccca actatggata
      121 aggggtgagg ggattcccaa aagatgccgg gattgacagc atcgatttgc caaaactgat
      181 cgtcaaagcc gcttccggag agccccctca atggccgtcg atatcacggc gctctattgc
      241 tgtctcgatg acttctgcaa agtgttcgaa gactgggaag cgcaccggct gatcccgtcg
      301 cagacaacac ggcaacgcac cggcaagctc tcgcgctctg agatgctgtt catcatggtg
      361 ctgtttcacc tctcgccgtt caagcatttc aaggtgttct accattatgg gatcggccag
      421 cagcatcgcg cctgctttcg tgagcttccc cattacgacc gtttcgtcgg cctgatgccg
      481 cggctgttcg cgccattgat ggtcctgctg catagcttga gcggcgccca gaccggcatc
      541 tacttcgctg attcaaccaa gcttgccgtc tgtcacaatc gccgcatcca ccgtcacaag
      601 gtcttcgatg gcttggccgc gcgtggcaag accagcatgg ggtggttttt cggcttcaag
      661 ctgcacttcg tcatcaacca caagggccag atcatggccg tgaaaatcac ccccggcaac
      721 accgccgaca gcaccgtgct ggatgagatg accagacacc tggccggcaa gctctacgcc
      781 gacaaaggct atatcggtca ggacctgttc aagacactct ggcagcgcgg cctgcacctc
      841 attaccgcta tccgccggaa catgcgaaac tacctgatgc ccctgactga caagatcatg
      901 ctgcgcaagc gcttcgtcat cgaaaccgtc cttgataccc tcaagtctga gatgggcctc
      961 gagcattcac gccacaggtc gcccgtgaat gccatggtcc atgttctctc ctgccttgtc
     1021 gcttacgcct tcagacccgg aaagccttcc atctccctca acagcaagca tctccaggct
     1081 tatccgtagc tgaggttaac cgaaataagt taatgaacac accagttagc cgataatcac
     1141 ccagttga
//
LOCUS       DASQSL010000012         1825 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_137509, whole genome shotgun sequence.
ACCESSION   DASQSL010000012 DASQSL010000000
VERSION     DASQSL010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1825
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137509"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            131..577
                     /locus_tag="VE844_00125"
     CDS             131..577
                     /locus_tag="VE844_00125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99819.1"
                     /translation="MNQTPFQQPDRPVALIFISLFVFIMAGFSMMSVISAIVRATSTS
                     TQEQQLYVSSLTFIDYGLVLLANLALFIGGAALFLLRKAAFYLFLSSVVLVLIKVLWE
                     SFAKTWFTGAAVDFASEPWVFLGVFIGGLVGICWYTRKLMKEGLLY"
     gene            665..796
                     /locus_tag="VE844_00130"
     CDS             665..796
                     /locus_tag="VE844_00130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99820.1"
                     /translation="MYTKKILSLNDVKRVVVAAEAEAKRNNWNVAIRSPRPEPMPYR"
     gene            complement(787..>1825)
                     /gene="lnt"
                     /locus_tag="VE844_00135"
     CDS             complement(787..>1825)
                     /gene="lnt"
                     /locus_tag="VE844_00135"
                     /inference="COORDINATES: protein motif:HMM:TIGR00546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006497 - protein lipidation [Evidence
                     IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HZB99821.1"
                     /translation="VVLSAGTLCYAWAYPQRLRCLVLLVPLWGGAWLANRIAWTESSS
                     TEPIEVALIQGNIPQALKWLPAKYQATLDRYLALSAPHWGIDLMIWPETAIPAFYHPA
                     QPLIQALQAQVESTGTDMLIGVPSMGESDKTYYNSVVRIGSTAGFYHKRHLVPFGEYM
                     PLQPIVGRLLNFLEIPMADFSAGSDAQSLLRVADQPVGISICYEDAFGEEVIDTLPHA
                     TLLVNVSNDAWFGDSIAPHQHLEMARMRALETGRYLLRATNTGISAVIDRRGTTIARS
                     PQFEAHALIAQATPYQGATPYVRFGNAPVIVALIFMLGLGATLERIKRQVRSPQRRII
                     AVSRKSRRDYL"
BASE COUNT          399 a          489 c          512 g          425 t
ORIGIN      
        1 gcctgaacaa taaatttcaa acaccgtgaa gggctaaacc ccctctattg ttatggatca
       61 aagcggcgga gggggttttt gttttcgtgg cctgcgacgc cactcattaa accataaaga
      121 ggcactggca atgaatcaaa ccccctttca gcaacccgat cgtcccgttg cactcatctt
      181 catatcgctc tttgttttta tcatggccgg tttctctatg atgtctgtta tctcagccat
      241 cgtgagagcc acttctacat ctacacaaga acaacagctg tatgtgagca gcttgacctt
      301 tatagactat ggactggtct tgctcgccaa tcttgcgctt tttatcggag gagcggcgct
      361 gtttttactg cgcaaagcgg ctttttatct cttcctaagc agcgtggtcc tggtgctgat
      421 taaggtactg tgggaaagtt ttgctaaaac ttggttcaca ggcgccgccg tggatttcgc
      481 aagtgagccg tgggtctttt tgggcgtgtt tataggcggc ttagtgggga tctgttggta
      541 tacccgcaag ctcatgaaag agggcctgct ttactgagct tcccgtgctt tcatgcaggt
      601 ttgtccctta gagcctgtct aaaaagcgtc gtgagcgggc gtcagctgga ggaggccgga
      661 gcaaatgtat accaagaaga tactgagcct caatgatgtc aaacgcgtgg tcgtggcagc
      721 ggaagcagag gccaagcgta ataactggaa tgtggcgatc agatcgccca ggccggagcc
      781 aatgccttat agataatccc ttctggactt acgggataca gcgatgatcc ttctctgagg
      841 agacctaacc tgtctcttga tcctctctag ggttgccccg agccccagca tgaatataag
      901 tgcaacaatg accggagcgt ttccgaagcg tacgtagggg gtcgccccct ggtaaggggt
      961 ggcctgcgct atcagggcat gagcctcaaa ttggggagag cgggctatgg tcgtgccgcg
     1021 cctatcgata acagccgaga tcccggtatt ggtcgcgcgc aggagatagc ggccggtctc
     1081 gagcgcccgc atccgcgcca tctctaagtg ttgatggggt gcgatggaat ccccaaacca
     1141 ggcatcgttg ctcacgttca ccagcagcgt agcgtgtggc agcgtgtcga tcacctcctc
     1201 accaaaggca tcctcgtaac agatggagat ccccaccggc tgatccgcca cccttaataa
     1261 ggattgcgca tcgcttcccg cgctgaaatc cgccataggg atctcaagaa aattcagtaa
     1321 cctgcccacg attggttgga gcggcatgta ttcgccaaag gggaccagat gccgcttgtg
     1381 gtaaaaaccc gctgtgctgc cgatccggac cacgctgtta tagtaggtct tgtcggactc
     1441 tcccatcgaa ggtacgccga tcagcatgtc ggtgccggtg ctttcaacct gcgcttgcag
     1501 ggcttggatc aagggctgag cagggtggta gaacgccggg atcgcggtct cgggccagat
     1561 catcaaatcg atcccccaat gcggcgcgct gagtgccagg taacgatcca gcgtcgcctg
     1621 atactttgcc ggcagccatt tgagggcttg cggtatatta ccctggatga gggcaacctc
     1681 aatcggttcc gtgctagagc tctcggtcca ggctatcctg ttggccagcc aggcgccacc
     1741 ccaaagaggg acaagtaaca cgaggcacct caagcgctga ggataggccc atgcatagca
     1801 gagggtgccg gcgcttaaga ccacc
//
LOCUS       DASQSL010000013         1036 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_151296, whole genome shotgun sequence.
ACCESSION   DASQSL010000013 DASQSL010000000
VERSION     DASQSL010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151296"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..489
                     /locus_tag="VE844_00140"
     CDS             <1..489
                     /locus_tag="VE844_00140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99822.1"
                     /translation="PFGTVERWLGWMAHDPEVMSETQSRRWVGRHGEIIRQAEWAEVK
                     ALQKRPDLNGLKAQLQEAGEPRRPAAWAAELNQAVETALAQANPQPPAGVRAADWERV
                     LAVKRTDPLLKWTTCVAWGLKSRPEKWSPLLTKSSFAAPKNGVFWNWERPLCAPPAAT
                     AT"
     gene            459..>1036
                     /locus_tag="VE844_00145"
     CDS             459..>1036
                     /locus_tag="VE844_00145"
                     /inference="COORDINATES: protein motif:HMM:NF018488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0236 family protein"
                     /protein_id="HZB99823.1"
                     /translation="MRTASGYRYLSGSIERVLQQLFLLLSLSGSLQTKITLLGDGARW
                     ISRFFQERLAAWPLAALLLDWYHCRKQCYELTSLICRGRQAKAELLGWLLKHLWRGQV
                     QEALAILEQYRPQAKNLEKLNELINYLKNRQAYIPNYRERRAQRQYIGSAHVEKGNDL
                     IVARRQKHQGMHWSEQTSDALAALRTLMLNGG"
BASE COUNT          227 a          292 c          325 g          192 t
ORIGIN      
        1 ccgtttggca cggttgaacg ttggttgggg tggatggccc atgatccgga ggtcatgtcg
       61 gaaacgcagt cgcggcgttg ggtgggtcgg cacggtgaaa tcatccggca ggcggagtgg
      121 gctgaagtga aagcgctgca aaaacggccc gacctaaatg gattgaaggc ccagttgcag
      181 gaagcgggcg agccgcgccg tccggccgcc tgggcggctg aactgaacca ggcggtggaa
      241 acggccttgg cccaagctaa ccctcagccg cccgcaggcg tcagggcagc cgattgggaa
      301 cgggtgctgg cagtcaagcg aactgacccc ttgctcaagt ggacgacctg cgtcgcttgg
      361 ggcctgaaat ccaggccgga gaagtggtcg ccattgttga cgaaatcgtc gttcgccgcc
      421 ccgaaaaacg gcgttttctg gaactgggaa cggcctttgt gcgcaccgcc agcggctacc
      481 gctacctgag cggcagtatt gaacgggtgt tgcagcagtt attcctattg ctcagcctga
      541 gtggtagcct gcaaactaag atcaccttgc tgggcgatgg tgcacgttgg atcagccgct
      601 tcttccagga acgcttggcg gcctggccat tggctgcgct gctgttggat tggtatcact
      661 gccgcaagca atgctatgag ctgaccagcc tgatctgtcg tggccgccag gctaaggctg
      721 aactgctcgg ctggctgctc aaacacttgt ggcgtgggca agtacaagag gccctcgcta
      781 tcctggaaca ataccgccca caagccaaaa acctcgaaaa gctcaacgag ttgatcaact
      841 acttgaagaa ccgccaggcg tatatcccca attaccgaga acgtcgagca cagcgccaat
      901 acatcggcag cgctcacgtc gaaaaaggca acgacctgat tgtggcccga cgacagaagc
      961 atcaagggat gcattggagc gaacagacca gcgacgcact ggccgctctg cgtaccctca
     1021 tgctcaatgg cggttg
//
LOCUS       DASQSL010000014         3845 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_192418, whole genome shotgun sequence.
ACCESSION   DASQSL010000014 DASQSL010000000
VERSION     DASQSL010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3845)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3845)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3845
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192418"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..394
                     /locus_tag="VE844_00150"
     CDS             <1..394
                     /locus_tag="VE844_00150"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="beta-propeller fold lactonase family protein"
                     /protein_id="HZB99824.1"
                     /translation="RDGKEAYATSEISGEVKRVDMVQHTILKKVPLGDDSIKPKDVLL
                     SKDERLAYVAGGRANQIIVLDAKTLEIKTRIPVGKRVWGLAMTRDGSRIYTTNGTSNN
                     VSVIDTATHQVVATIEVGEGPWGVVIDD"
     gene            470..1834
                     /gene="miaB"
                     /locus_tag="VE844_00155"
     CDS             470..1834
                     /gene="miaB"
                     /locus_tag="VE844_00155"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002707343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HZB99825.1"
                     /translation="MGGKLYIKTFGCQMNEYDSSKMFDILEASHRLSPTETPEEADVL
                     LINTCSVREKAQEKLFSQLGLWQKLKKTHPGLIIGVGGCVASQEGAAILERAPYVDII
                     FGPQTLHRLPEMLEQAQKTRLPIIDISFPEIEKFDRLPEPKVHGPTAFVSIMEGCSKY
                     CSFCVVPYTRGEEFSRPFDQVITEVVELAERGVREVTLLGQNVNAYRGLMHDGKIADL
                     ALLIRYLAAIDGIGRIRFTTSHPAEFSGRLIEVFAEVAELVNHLHLPVQSGSDRILAV
                     MKRGYTVLEYKSKIRRLREVRPEISVSTDFIVGFPGEMEADFTATLDLVHDIGFDYSF
                     SFIYSKRPGTPAASMPDDVPEGRKKERLAILQSRLDQRAAAISRAMVGRIERILVEGP
                     SRRDPVQLCGRTENNRVVNFYGRRELIGQFIDVRITEALPHSLRGERMLAPVEQIHAS
                     PLHP"
     gene            1831..2841
                     /locus_tag="VE844_00160"
     CDS             1831..2841
                     /locus_tag="VE844_00160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010960734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HZB99826.1"
                     /translation="MNTSLKLPQPLASDIVLEPADNARLANLCGQFNEHLRQIERRLG
                     VEINNRGNNFKVIGLPRLVEASRRIIHRLYQATREETLSPARIHLFLQQAGIDDLFDE
                     TEQEEQVIYTQRCVVKARGANQRRYLENIRHHDINFGIGLAGTGKTFLAVACAVEALD
                     RGRVQRLVLVRPAVEAGERLGFLPGDIMQKVDPYLRPLYDALYEMLGFEKVAKHLERN
                     IIEIAPLAYMRGRTLNESFIILDEAQNTTIEQMKMFLTRIGFGSTAVVTGDITQIDLP
                     QEHRSGLRHVIEVLKNTPGVAFTFFEARDVVRHPVVARVLEAYEAYDTKIKMASRSVD
                     KQ"
     gene            2838..3293
                     /gene="ybeY"
                     /locus_tag="VE844_00165"
     CDS             2838..3293
                     /gene="ybeY"
                     /locus_tag="VE844_00165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006957365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HZB99827.1"
                     /translation="MSVEVVVQYAAGPPTALPSKKTITLWVKAALAGRREEAQVTVRI
                     VDEEEGSELNQRWRKRAGPTNVLSFPSTGLERIAPALLGDIVICAPVVEREAQHQRKA
                     LRVHWAHMVIHGTLHLLGLDHIEEQQALIMEQLETEILGRLGYADPYSP"
     gene            3290..>3845
                     /locus_tag="VE844_00170"
     CDS             3290..>3845
                     /locus_tag="VE844_00170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018953701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HZB99828.1"
                     /translation="MSDDDSSVSSLWQSWFDRIRKARCFQPRDRQELIELLRQLETRS
                     LIDPDTLAMLEGALQVSEMQVRDIMVPRAQMVAVEEGTDVRGFLPIVIESGHSRFPVI
                     DEDRDEVVGVLLAKDLLEYLAGKEQSPLAIRDVLRPPAFVPESKRLNILLREFRTNRT
                     HMAIVVDEYGGIAGLVTIEDIIEQI"
BASE COUNT          864 a         1037 c         1112 g          832 t
ORIGIN      
        1 ccgggatggc aaggaggcct atgcgacctc cgagatcagc ggcgaggtca aacgagtgga
       61 catggtccag cacaccattc tgaaaaaggt tcctctcggt gatgacagta tcaaacccaa
      121 ggatgtgctg ctaagcaaag atgagcgcct ggcatacgtc gcgggtggtc gggccaatca
      181 gatcattgtt ctcgacgcca agaccctcga gatcaagacc cggatcccag tcggcaagcg
      241 tgtctggggc ctagcgatga cccgtgatgg gagccggatt tacacgacca acgggaccag
      301 caacaacgta tcggtcatcg acacagcgac ccatcaagtg gttgcaacga ttgaagtcgg
      361 tgagggaccg tggggggttg tgatcgacga ttaatagact tcttgcggct ggaaaaatcc
      421 ttgcaaacgg tgtaagttaa tagtatttct agaacttcat taggagtgca tgggcggtaa
      481 gctttatatc aagacctttg gttgtcagat gaacgaatac gattcttcca agatgttcga
      541 tatcttggaa gcgtcgcatc gcttgagccc gacggaaacc cccgaagaag ccgatgtcct
      601 gttaatcaat acctgctcgg tccgggaaaa ggcgcaggaa aagctgtttt cccaattggg
      661 cctatggcaa aagctcaaaa agacccatcc tgggctcatt atcggtgtcg gtggttgtgt
      721 ggcgagtcag gaaggggcgg cgattctcga gcgcgccccg tatgtcgata ttatctttgg
      781 accacagacc ctgcatcgct taccggagat gctcgagcag gcacaaaaga cccgccttcc
      841 tatcatcgac atcagcttcc ccgagatcga aaaattcgat cgtctgcctg aaccgaaggt
      901 acacggtcca acagccttcg tatcgatcat ggaaggctgc agcaagtatt gcagcttttg
      961 cgtcgtacct tatacccgag gcgaggaatt cagccggcca ttcgaccagg tgatcaccga
     1021 ggtcgtcgag cttgcggagc ggggtgtccg ggaagtcacc ttgcttgggc aaaacgtcaa
     1081 tgcctatcgc ggtcttatgc acgatggaaa gatcgcagat ctggcgctcc ttatccgtta
     1141 cctggccgcc atcgacggca ttggccggat ccgattcacc acctcgcatc ccgctgagtt
     1201 ttcaggacga ttgattgagg tcttcgccga ggtagccgag ctggttaatc acctgcattt
     1261 gcccgtgcag agcggctctg accggatcct ggcggtgatg aaacgaggct acacggtgct
     1321 cgaatacaaa tccaagatcc ggcgtctgcg tgaggtacgg cccgagatca gcgtttccac
     1381 ggatttcatc gtgggatttc cgggcgagat ggaggcggac ttcaccgcga ccctggacct
     1441 cgttcatgac ataggttttg actattcctt tagctttatc tatagcaagc ggcctggaac
     1501 gcctgcagcg agtatgccgg atgatgttcc cgaagggcgt aagaaggagc gcctggcaat
     1561 ccttcaaagc cgcctcgatc agcgggctgc agcgatcagc cgggcaatgg taggaaggat
     1621 cgaacgcatc ctggtagaag gaccctcgcg cagagacccg gtacaacttt gtggacgtac
     1681 ggaaaataac cgggtggtca atttttacgg ccgccgtgag ctcatcgggc agtttatcga
     1741 tgtgcggatc actgaagccc tccctcattc actccgcggc gaacgaatgc tagcgcctgt
     1801 tgaacagatc cacgcgtctc ccctacatcc ttgaacacct cgcttaaact cccacagccg
     1861 ctcgcgagcg atatcgtcct tgagccggct gacaatgcgc ggctggccaa tctctgtggc
     1921 cagttcaatg agcatctgcg ccagatcgag cgccgtttag gggtcgagat caataaccgc
     1981 ggcaataatt ttaaggtgat cggtctgcca cgcctggttg aggcaagccg tcgcatcatc
     2041 caccggctct accaagcgac ccgcgaagag acgctgtccc ctgcccgtat ccatctgttt
     2101 ctgcagcagg cgggcatcga tgatctgttc gatgagaccg aacaggaaga gcaggtgatt
     2161 tatacccagc gctgtgtggt caaggcacgt ggcgccaatc agcggcgcta tctcgagaat
     2221 atccgccacc atgatattaa cttcggtatc ggtctggcag gtacaggcaa gacctttctc
     2281 gccgttgcgt gtgcggtcga ggccttagat cggggacggg tacagcgctt ggtgctggtg
     2341 cggccggcgg ttgaggccgg ggaacggctc ggtttccttc ccggcgatat catgcagaag
     2401 gtcgatccct atttgcggcc gctctacgat gcgctctacg agatgctcgg gtttgagaag
     2461 gtggcaaaac atctggaacg caatatcatc gagatcgcac cgcttgccta catgcggggc
     2521 cgcaccttga acgaatcgtt cattattctc gatgaggcgc agaataccac tatagagcag
     2581 atgaagatgt ttctgacccg gatcgggttc ggctccacgg ccgtggtcac aggcgacatc
     2641 acccagatcg atctaccgca agaacaccgc tccggcttgc gccatgtgat cgaggtattg
     2701 aaaaacacgc cgggtgtggc gtttaccttc tttgaggccc gggatgtggt ccggcaccct
     2761 gtcgtcgctc gcgtgcttga ggcctatgaa gcttacgaca ctaaaatcaa aatggcgagc
     2821 agatcggtag acaaacagtg agtgtagagg ttgtagttca atacgctgca ggtcctccta
     2881 ccgcgcttcc ttccaaaaaa accatcacgc tctgggtcaa agcggcatta gcggggcgcc
     2941 gcgaagaggc ccaggtcacc gtccgcatcg tcgatgaaga ggagggtagc gagttgaatc
     3001 aacgctggcg caagcgcgcc gggcctacca acgtgctgtc tttccccagt accggtcttg
     3061 agcggatcgc tccggcgctc cttggagata tcgttatctg cgcccccgtg gtcgaacggg
     3121 aagcgcaaca ccagcgcaag gccctccgcg tccactgggc gcatatggtg atccacggga
     3181 ctttgcatct cttgggcctt gatcatatcg aggagcagca agcgcttatc atggaacagc
     3241 tagagacgga gatcctcggg cgattgggct atgcggatcc ttactcaccg tgagcgacga
     3301 cgatagtagt gtttcttctc tgtggcagtc ctggtttgat cggatcagaa aggcgcgctg
     3361 tttccagccg cgcgaccgtc aagagcttat cgaattattg cgccagctgg aaacccggag
     3421 cctcatcgat ccggatacct tagccatgct cgagggcgct cttcaggtct ccgagatgca
     3481 ggtgcgggat attatggtgc cacgcgcaca aatggtagcg gtggaagaag ggacagatgt
     3541 tagaggattt ctgcccatcg ttatcgagtc cggacactcc cgctttccgg tgatcgacga
     3601 agatcgggat gaagtggtgg gcgtactgct agccaaagac ttactcgaat atctcgccgg
     3661 gaaagagcaa tcaccgcttg ctattcgaga tgtactgcgg cccccggcat tcgttcctga
     3721 gagcaagcgg ttaaatatcc tgctgcggga attcaggacc aatcgcaccc acatggccat
     3781 cgtcgtagac gaatatggcg gcattgcggg attggtgacg attgaggata ttattgaaca
     3841 gatcg
//
LOCUS       DASQSL010000015         1567 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_105, whole genome shotgun sequence.
ACCESSION   DASQSL010000015 DASQSL010000000
VERSION     DASQSL010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1567
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(209..>1567)
                     /locus_tag="VE844_00175"
     CDS             complement(209..>1567)
                     /locus_tag="VE844_00175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99829.1"
                     /translation="EVCPEASSTPQLVQIEVSRTHPLLVLKRALPWEAISEAMTRHWR
                     THGKNVDGGSGLPWDVSLYVPLVVLMLIKHFDSRQMEAYLAENVVARLFIGRQRDAQA
                     QIRDHSNIARAYAALGKAGIDEVTHLVIKQAHAFGFVDEGVISSDTTAQELAIGYPNE
                     PGILRGLAQRCGRALMRLKTRGIQGLDAALEQTETILRSVKAHHLFTKGKTEKREVLT
                     RILTEVGRLISQTRVIATAVQGRSDRVIQSARSRLVAMHEVIKPLMGQIGPWLTTGKV
                     AANKIVHVGIPQARAIVRNKVGKKTEFGLAYLISRLGGGYVFGERIAANADERQMPLK
                     ALAGYREIFGPKATPELVVYDRGGDSTPTRQKLALAGVKDIGIQPKGKRPWSVAEAVR
                     DQIRSERGQTEGVIGTLKSNRYKFNKPKERLWQTLEMAGPRSILSFNLNKLMRDLVAL
                     TH"
BASE COUNT          316 a          488 c          395 g          368 t
ORIGIN      
        1 ctactgtcac cacccataag ccggaaacgc atcttgatcg tgcggctagc tgaatcttca
       61 gcacatagga ataaaacatt tttagactcg ccgatattta gagcgtgtcg cagaattgcg
      121 ttggaggtca ttcggtcctc cattcctctc ttctcccttt gtatctctcc tctatgctga
      181 cgccgttccg tttgttgctg cccatccctt agtgggttag tgccaccaaa tcccgcatca
      241 atttgttgag attgaacgag aggatagacc gtggccccgc catctccagc gtttgccaaa
      301 gacgttcctt cggtttgttg aatttgtacc ggttgctttt caaggtcccg atcacccctt
      361 cggtctgccc gcgctcgctg cggatttggt cccggactgc ctcggcaacc gaccaaggcc
      421 gtttcccctt gggctgaatc ccaatatctt tgacaccggc taaagccagt ttctggcgcg
      481 ttggggtcga atcgccaccg cggtcgtaga ccaccaactc cggtgtcgct tttggaccaa
      541 atatctctcg gtagcccgca agggccttga gcggcatctg cctctcgtcc gcattggccg
      601 caattcgttc gccaaacaca tacccaccgc ccaagcggct gatcagatag gccaagccaa
      661 attcggtctt cttgccaact ttgttgcgca cgatggctcg tgcctgcggg atacccacat
      721 gcacgatttt gttggccgcc actttgcccg tcgtgagcca gggcccaatc tgacccatca
      781 gcggcttgat cacctcgtgc atggccacca gcctggagcg ggcactttga atcacccgat
      841 ccgaacgccc ctgcacggct gttgcgatga cacgggtctg actgatcagc cttcccactt
      901 cggtcaagat acgagtcaga acctcgcgtt tttccgtttt gcccttggta aagagatgat
      961 gtgctttgac cgagcgcaaa atcgtctcgg tctgttccaa ggccgcatcg aggccctgaa
     1021 taccccgcgt tttgagccgc atcaaagccc ggccacagcg ctgcgccaag cctctcaaga
     1081 tgcccggttc gttgggatag ccaatggcca actcctgtgc cgtggtgtcc gacgagatca
     1141 caccctcgtc gacaaagcca aaggcatggg cttgcttgat caccaagtga gtaacctcgt
     1201 cgatacctgc tttgcccagt gccgcatagg cccgagcaat gttggagtga tcccgaatct
     1261 gggcttgggc atctcgctga cgaccaataa acaaccgcgc caccacattc tcggccaagt
     1321 aggcttccat ctggcgcgaa tcgaagtgct tgatcagcat cagcactacc aagggcacat
     1381 ataaggagac atcccagggc aaacctgacc caccatcgac atttttgccg tgggtgcgcc
     1441 agtgacgcgt cattgcttcg ctgatcgctt cccagggcag ggcccgtttc aacaccagaa
     1501 ggggatgggt ccgtgacacc tcgatctgga ccagttgagg ggttgaactt gcctcgggac
     1561 aaacctc
//
LOCUS       DASQSL010000016         1948 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_178739, whole genome shotgun sequence.
ACCESSION   DASQSL010000016 DASQSL010000000
VERSION     DASQSL010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1948)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1948)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1948
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178739"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(23..325)
                     /locus_tag="VE844_00180"
     CDS             complement(23..325)
                     /locus_tag="VE844_00180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99830.1"
                     /translation="MSRYVTVPISTEVIEWNPDCAFSTAYEDGVLMITVDTRCQNVHQ
                     RLGLSTKTRLHWGKDNSVEAQELSAMAGPKLTGADAGRILPEGRRAGALHDLGQGS"
     gene            complement(403..579)
                     /locus_tag="VE844_00185"
     CDS             complement(403..579)
                     /locus_tag="VE844_00185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99831.1"
                     /translation="MLVQPLLGWRQVNVTARRTKQDFAQQMHLLVDVYFPDATLIRLV
                     VDNLECVPPDLLGI"
     gene            911..1273
                     /locus_tag="VE844_00190"
     CDS             911..1273
                     /locus_tag="VE844_00190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99832.1"
                     /translation="MVESITVITLLLCALDRIEVQAIFDRDGYESRRRALPGARLVKV
                     LVVYQMIHTAKLRGLIRTLTEHPGLQKALGGRVASIPCPMVLPSGMLGRWSRPGWRWY
                     RRMGRGLSGWAGSSPAWR"
     gene            1189..>1948
                     /locus_tag="VE844_00195"
     CDS             1189..>1948
                     /locus_tag="VE844_00195"
                     /inference="COORDINATES: protein motif:HMM:NF033592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZB99833.1"
                     /translation="MVEAWMAVVQTYGPWLERLGRKFARMAVVDASLIKLSLLAYSWA
                     EYRKRSGAAKMQAVLEWARGIPQQWVVTTGKVHDLKGAATLQWARHWTYIFDRGYLGF
                     AFLNTLLDAGAHFVVRFKDGVGYRILERFTVPHAPATAGFRLTSDWTLRLPGWEGVFL
                     RLVSYQLPDGKLIRVLTDRFDLSALSVAQLYKERWTIENWWKWVKQMFKIKRPLGESE
                     NALPVQIVSAFVTDLLLRAFKHSSGFTSSLYEFVS"
BASE COUNT          394 a          531 c          570 g          453 t
ORIGIN      
        1 ctcggaggcc gagcgccgcg cgtcaagacc cttggcccag gtcgtgaagt gcacccgctc
       61 tccgtccttc aggtaatatc cgtcccgcgt cagcacccgt gagcttcggc ccggccatcg
      121 cactgagctc ctgcgcctca acgctattgt ccttgcccca atgcagccgg gtcttggtgc
      181 tcagccccaa gcgttggtga acgttctgac agcgcgtgtc gaccgtgatc atcagcacgc
      241 cgtcttcata cgcagtgctg aaagcacagt ccgggttcca ttcgataacc tcggtactga
      301 tcggaacggt cacgtaccgg ctcataccca tctccttctg ccaggtctct ttcaggagat
      361 gagcagaatc gcctgtttgt caaattctta caaatgctta cctcagattc caagtagatc
      421 tggtgggaca cactcgagat tatcgactac caaccggatc agggtcgcat cgggaaaata
      481 aacgtcgacc aacaggtgca tctgttgtgc aaagtcttgt ttcgtgcggc gcgcagtgac
      541 attgacctgg cgccatccca gcaacggttg tacgagcaaa aacaggttcg ctgtgccttc
      601 acgtttgtat tcatagtcgt aacactcggg ttgacccggg cgaactggca gtggagtgcg
      661 cgtttcgctg accgaccagt tgcacagggc tttcctcgaa gcagacctgt gggcattgcg
      721 gattatacgg ctcggcgtac aaatcaagca cgtcttccat atgccagaca cactcagtcc
      781 tgtcccatat ataggtcatt gatataaatt agagtttatt gaaaagcttt aggtgagatg
      841 taacagctat gcgaaccttt tctcgatctg gcaaactgag gtaaggaatt acacctgaaa
      901 gaggctttgc atggtcgagt ctatcaccgt catcacgttg ctgctctgtg ctctggatcg
      961 cattgaggtg caagcgatct ttgatcgcga cggttatgaa tcgcgccgcc gtgcgctgcc
     1021 cggtgcccgc ctggtcaaag tgctggtggt ctatcagatg atccacacgg cgaaattgcg
     1081 ggggctgatc cggaccctca ccgaacaccc cggtctgcaa aaggcactgg gcgggagggt
     1141 ggcctcaata ccttgtccaa tggtcttgcc cagcgggatg ttgggcagat ggtcgaggcc
     1201 tggatggcgg tggtacagac gtatgggccg tggcttgagc ggctgggccg gaagttcgcc
     1261 cgcatggcgg tagtcgatgc gagcctgatc aagctgtcgc tgttggcgta cagctgggcc
     1321 gagtaccgta agcggagcgg ggcagcgaag atgcaggcgg tcttggagtg ggcccgtggg
     1381 attccccaac aatgggtggt cacgaccggt aaggtgcatg acctgaaagg cgcggcgacc
     1441 ttgcagtggg cccggcattg gacctacatc tttgatcggg ggtacctcgg ctttgccttt
     1501 ctgaacactc tgctcgatgc cggagcgcac ttcgtggtgc gcttcaaaga cggagtcggc
     1561 taccgcatcc tggagcgctt tacagtgccg catgcacccg ccacggcggg ttttcgtctg
     1621 accagtgact ggaccctccg tttgccaggc tgggaaggcg tcttcttgcg gctggtcagc
     1681 taccagttgc ccgatggcaa gttgatccgg gtcttgaccg atcgtttcga tctgagtgcc
     1741 ctcagcgtgg cccagttgta caaagaaaga tggaccatcg aaaactggtg gaagtgggtc
     1801 aagcagatgt tcaagatcaa gcgccctctc ggtgaaagcg agaatgcctt gcccgtgcag
     1861 atcgtgagtg cctttgtcac tgatttgttg ttgcgcgctt tcaaacatag cagcggtttt
     1921 accagcagtc tctatgaatt tgtgagca
//
LOCUS       DASQSL010000017         1416 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_109993, whole genome shotgun sequence.
ACCESSION   DASQSL010000017 DASQSL010000000
VERSION     DASQSL010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109993"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..581)
                     /locus_tag="VE844_00200"
     CDS             complement(<1..581)
                     /locus_tag="VE844_00200"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygenase MpaB family protein"
                     /protein_id="HZB99834.1"
                     /translation="MTDPIFSPSSMFWRVNRELVSGLAGPRAVLMQIAHPPIAAGVAE
                     HSRYREHRFARLYRTSMAAAAITFGSRDLALRVISAINRRHLTVHGTLQKQAGVFPAG
                     TPYDANDPQLKLWVLNTIIESTLLVYEMFVSPLSEEGREEYYSDSLIVAKLFDIPEHL
                     IPPSYADFRRYMNSMLGSDVVMVSDTAREIAHEL"
     gene            complement(885..1226)
                     /locus_tag="VE844_00205"
                     /pseudo
     CDS             complement(885..1226)
                     /locus_tag="VE844_00205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018498322.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="B12-binding domain-containing radical SAM
                     protein"
BASE COUNT          335 a          368 c          383 g          330 t
ORIGIN      
        1 agttcgtgcg caatttctcg agcggtatcg ctgaccatga cgacatcgct gcccagcatg
       61 ctgttcatgt aacgccgaaa atcggcataa ctcggtggaa tcaagtgctc tggtatatcg
      121 aacagttttg cgacgattag actgtcgctg taatactcct cgcgtccctc ttcagaaagc
      181 ggcgagacga acatttcata gacaagaaga gtcgactcaa tgatggtatt caacacccaa
      241 agcttgagtt gcggatcatt cgcatcgtat ggcgttcccg caggaaaaac tccggcctgt
      301 ttttgaagcg tgccatgcac cgtcaagtgc ctcctgttta tcgcactgat cactcgaagc
      361 gccagatccc ggctgccaaa tgtgattgcg gcagcagcca tcgacgtgcg gtaaagacgg
      421 gcgaaccggt gttctcggta gcggctgtgc tcggcgacgc ctgctgcaat cggcggatgc
      481 gcaatctgca tcaacaccgc gcggggacca gccaaaccac tcaccaattc acgattgacg
      541 cgccaaaaca tcgaggaagg cgagaagatc ggatctgtca tgtagtgata ttaaggctaa
      601 cgctcaaacg tattcgagaa cgaatcccgg tcgaacacca tcaaattcaa aacgaactgc
      661 ggcgagtcgg acgtcttggt ggctgggtca atagtcgcga ccttgacatt gtccggtatc
      721 acgatttcaa tcttgagcct cacgaccgat ttggttttgt cccaggtctt gatctcgccc
      781 agattgatcc ggcctgtgac ccatttatcc gtcttctgga tcggcatcga tgcgctgttc
      841 gcttccgtaa agtccggaga cccttccgta gtccaataca ctaccgggcc cagaaagatc
      901 gagtccgcat gcgctgcagc ttcatcgggc agggaagtga catgcagccc gccgaggaca
      961 acataagcac cttgccggcg gtaatggtcc gcaatctgat aggaccggta tgcggacgtg
     1021 atatagacct ggatcacgac cagctccggc cgatcgtcga gtttcagctt ctcgacatgc
     1081 tcatcggtga tcgtcacttc atcgtccgga tccaggtagg ccgcgagagt ggccaggcct
     1141 aaaggcggga acagtaagta cttgattgga cggaataaag gactggttgc ttcagtaagg
     1201 gccgggagaa tcattttcac tttcattacg gaggagtgta atgaagagta ctttattgtg
     1261 taaagtaaat tttgtgaacg gctggcgttg catggttccc tgccgccagt tcatggagcc
     1321 caccggattg ttcataggcg gtttgaattc cgacgaatgt attagggcac gacggcaatc
     1381 gcttcgattt caatcatgag gtcgggcatc gtgagt
//
LOCUS       DASQSL010000018         1382 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_55069, whole genome shotgun sequence.
ACCESSION   DASQSL010000018 DASQSL010000000
VERSION     DASQSL010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1382
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55069"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            238..1338
                     /locus_tag="VE844_00210"
                     /pseudo
     CDS             238..1338
                     /locus_tag="VE844_00210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011082855.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
BASE COUNT          317 a          424 c          398 g          243 t
ORIGIN      
        1 gacgactacc aggaaccgca acccttctcc accccgaaga cagcacaaat ccgggactgg
       61 gccacccatc aggcaatcgg ggacgagcag cagatcaccg tacacatcga ctgacacaca
      121 ttctccgaac gggtgctctg gccctacggc ttcaccgact ccgacaccgc tacgggcatc
      181 gacgacacca ctgcgggcct agtgtagtgt attgcgaata attttacagt gtgtgctatg
      241 ctgcgagtta tgagtagagc agcggcgcca ttggcgatat ccgatgggca gcgagaagtc
      301 ctggaaactc tggccaagtc gcagagctcg ccgcaccggg tggtgcggcg agctcgggcg
      361 ttgctcttag ccggggatgg ggtgccgaat tccacaatcg atgagatggt ggggatatct
      421 cgcccgaccg tgctggcctg gcgtgaccag ttcgagaaag aaggattggc tgggttcggc
      481 gaagtcgcca agggcagagg ccccaagccc tcgatcagca aggagaaagt cgccgagatc
      541 gtggagctga cgctgcactc gagacctgag ggcgagacgc actggtcgtg ccgatcgatg
      601 gcgaaacgcg cgggggtgag cccggcgtca gtgcaaagga tctggtcggc gcggggcctc
      661 aagccccacc tggtgaagac attcaaactc tcgaatgata aacattttga ggagaagctc
      721 gtcgacgtgg tgggtttgta cctgaatccg cccgatcagt ccgtggtgct gtgcatggac
      781 gagaagtcac aggtccaggc cctggaccgg acccagccgt ccttgccgat gaaaagggcc
      841 gagcgggcac gattacccat gactacaagc gccacggtac caccgccctc ttcgctgcgc
      901 tgaacgtgct caccggagtc gtcattggcc gctgcctgcc gcggcatcgc aacactgaat
      961 tcttgaaatt cctgcgcatc atcgaccgcg aggtgccaca aggattgcag atgcacatga
     1021 tttgcgacaa ctacggcacc cacaaacacc ccaacgtcaa agcatggctg gccaaaacac
     1081 ccgaggtttc acctgcactt cactcccacc tcctcctcgt ggctcaatct ggtcgaacgg
     1141 tggttccggg aactgatcga caaagctctc cgccggggcg tgttccacag cgtgaatgac
     1201 ctcatcaccg cgatcgaggg ctacctgaaa gcaaacaatg acaatccgaa accattcgtc
     1261 tggactgcca ccgccgagca aatcctcgcc aaggtcgccc gcggacgagt cgctctccag
     1321 caagtagaaa atcaatgatg agacgctgca ctagatcccc tccgaaaacc cctccgctgc
     1381 tg
//
LOCUS       DASQSL010000019         1706 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_151350, whole genome shotgun sequence.
ACCESSION   DASQSL010000019 DASQSL010000000
VERSION     DASQSL010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151350"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(187..459)
                     /locus_tag="VE844_00215"
     CDS             complement(187..459)
                     /locus_tag="VE844_00215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99835.1"
                     /translation="MSTRLPLFVWLSGLRWAIEQCFAEAKTALGMDQYEVRKYPGWHH
                     HMLTTMLAHFFLWHLQIRLGKKSTGHDGLPAEGLAGGGLAPQNLDA"
     gene            complement(478..1521)
                     /locus_tag="VE844_00220"
     CDS             complement(478..1521)
                     /locus_tag="VE844_00220"
                     /inference="COORDINATES: protein motif:HMM:NF033540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS701 family transposase"
                     /protein_id="HZB99836.1"
                     /translation="MLPACRTEGDVFTIPQFTLDPRDVEGFMEELHGFHTAFRDCFAR
                     REPRDHFFHYMVGQFSDLERKSIEPMALQVEGGNVRAMQRGISDAVWDDAQMLRTYHR
                     LVHEEMGDPEGVVIFDESGFPKKGRDSVGVARQYCGTLGKVDNCQVGVFAAYASRHGY
                     ALVDTRLFMPEPWCTDAYARRRTQCQVPPDCGFQTKPQLAGAMLWALRDEGVLPFKYV
                     VADCLYGHSPEFLEAVEEEASTIYFVSIPADTRCWVQGPVMQSKQYTYKGERRTKQVV
                     STLAKEPIAVETLAKSLHNCFWYRRKVAEGTKGPIEYEFTKRQVTLCRDSRPTRTAWL
                     VMKRTMGASPSYW"
BASE COUNT          345 a          515 c          486 g          360 t
ORIGIN      
        1 acatagatag cactaccatc atccgcggtt gcgcggatga tgcgcgatgg gacagcggag
       61 ggcgttggtg tagagtagcc ctacaacgct acttaaccag gcgtcgcttg catacgcctt
      121 tttctgtgcg acagaaaggc gcggtggttg cgctgttgcc tcccagctac cagttggagg
      181 acgtcctcaa gcgtccaggt tttgaggggc aagaccacct ccagcaaggc cctcagctgg
      241 gagaccgtca tggccggtgc tttttttccc caagcgtatc tgtaaatgcc agaggaagaa
      301 gtgggctagc atcgtggtga gcatgtgatg atgccagccg gggtatttgc ggacttcata
      361 ctggtccatg cccagtgcgg tttttgcttc tgcgaagcat tgttcgatgg cccaccgcag
      421 gccacttaac cagacaaaca ggggtaagcg cgtactcacc ggggcattgc tgacatacta
      481 ccaataggac gggctcgctc ccatggtgcg tttcatcacc aaccatgcgg ttctcgtggg
      541 gcggctgtcg cgacagaggg tgacctggcg cttggtgaat tcgtattcaa tgggcccttt
      601 tgtcccctcc gcgactttcc gtcgatacca gaagcaattg tgcaggctct tggccaacgt
      661 ctcgaccgcg atgggctcct ttgccagggt ggacaccacc tgtttcgttc gcctctcccc
      721 tttataggta tactgcttgc tctgcatcac tgggccttgc acccagcagc gagtatcggc
      781 agggatcgag acgaaataga tggtgctcgc ctcttcttca accgcttcca gaaattctgg
      841 gctatggcca tatagacaat cggcgacgac gtacttgaac ggcagcacgc cctcgtcgcg
      901 aagcgcccac aacattgccc ccgccagctg gggcttggtc tgaaatccgc agtccggggg
      961 cacctgacac tgggtgcggc ggcgcgcgta ggcgtcggta caccacggct ctggcataaa
     1021 gagccgcgtg tccaccaagg catacccatg ccgggacgcg taggcggcaa acaccccgac
     1081 ctgacaattg tcgaccttcc ccagggtccc acaatactgc cgcgccaccc ccacggagtc
     1141 acggcccttt ttcggaaagc ccgactcatc gaagatcacc accccctcag ggtctcccat
     1201 ctcttcatgc accagacgat ggtacgtccg cagcatctgg gcgtcatccc agaccgcgtc
     1261 actgatgccg cgctgcatcg cccgcacgtt cccgccctcc acctggaggg ccatgggttc
     1321 gatcgatttg cgttccagat cactgaactg gcctaccatg taatggaaga aatggtcccg
     1381 gggttcgcgc cgcgcaaagc aatcgcgaaa ggcggtatga aagccgtgca attcctccat
     1441 aaagccttcg acatcgcggg gatcaagcgt aaactggggg atggtgaaca cgtccccttc
     1501 ggtccgacag gctggtaaca tcctctgcct cctcgccgtg agctggtgat ctggaagcag
     1561 agtctatgcc aaggaggctc ctgttagcaa ggaaacgtcg ttgtagggat aatcacccgg
     1621 gctcccgatg aatggcgttc tactgcggcg tagaccggtt cttggtcgaa gataccgtct
     1681 ccgatgaagc gatggatacg gcgatc
//
LOCUS       DASQSL010000020         1334 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_151362, whole genome shotgun sequence.
ACCESSION   DASQSL010000020 DASQSL010000000
VERSION     DASQSL010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1334
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151362"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..542)
                     /locus_tag="VE844_00225"
     CDS             complement(<1..542)
                     /locus_tag="VE844_00225"
                     /EC_number="3.4.21.102"
                     /inference="COORDINATES: protein motif:HMM:NF023246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy terminal-processing peptidase"
                     /protein_id="HZB99837.1"
                     /translation="MQNLIELDRLNNEAGALGQLKTTEAQFFRVSGSSTQYRGIVPDI
                     VFPTALYSTEQGERAQENALPWAEIQPADFIPVQASLSAFTEIRSRHERRIKNDQAFQ
                     LLLAEIQSYQEAEKKNQVSLREAVRRQEQDTADKLRRERENQIRSAQKLDSLSTRETP
                     PKDSKDSKDGKSAQDDVLLY"
     gene            complement(530..>1334)
                     /locus_tag="VE844_00230"
     CDS             complement(530..>1334)
                     /locus_tag="VE844_00230"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HZB99838.1"
                     /translation="DFKIRMSLSLEGIGAVLEADNEYTIVRQIIAGGPAARSGKLQPE
                     DRIVGVAENEKSEIVSVVGWRLDDVVDLIRGPKGTRVRLQILPKGALSGGSPAIIPLT
                     RDTIKLEEQAAKKSIIESSSGTTKSRIGVITLPSFYMDFAARARGDADYRSTTRDVQR
                     LLAELTQEGVEGVIMDLRANGGGSLAESIELTGLFIEKGPVVQVKHASGRIEINEDSD
                     PKIVYAGPLAVLVDRHSASASEIFAGAIQDYRRGIVLGEPTLARARCRI"
BASE COUNT          272 a          382 c          349 g          331 t
ORIGIN      
        1 tcatagagta gcacatcgtc ttgagcgctc ttcccgtctt tactgtcttt actgtcttta
       61 gggggggtct cacgggtaga gagggagtcg agcttttgag cactgcggat ctgattttcg
      121 cgctcgcgcc ggagcttatc cgctgtatcc tgctcctgac gtcgcacggc ctcgcgtaga
      181 cttacttgat ttttcttctc ggcttcctgg taagattgaa tctccgcaag caatagctgg
      241 aatgcctgat cgttctttat gcgacgttca tggcgcgaac gtatctccgt aaaggcggag
      301 agggatgcct ggacgggaat aaagtcggca ggctggatct cagcccacgg tagcgcgttc
      361 tcctgggcgc gctctccttg ctcggtggag taaagcgccg ttggaaacac aatatccggc
      421 actatacccc ggtattgggt gctgctgccg ctcactcgaa aaaattgcgc ctccgtggtt
      481 tttagctgtc caagtgcccc cgcttcatta ttgaggcgat ccaattcaat cagattctgc
      541 accgtgccct tgccaaggta ggctccccga ggacgatacc gcggcgataa tcttgaatag
      601 cgccggcaaa tatctcggaa gccgaggcgc tatggcggtc aaccagtaca gctaagggtc
      661 cggcataaac gatcttagga tcgctatcct cattgatctc gatccggccg gaggcatgtt
      721 ttacctggac aacaggccct ttttctataa aaagtcctgt caactctatc gattcagcca
      781 aagaaccgcc tccattagcc cgtagatcca tgatgacacc ctcgacacct tcttgggtga
      841 gctcagccaa gagccgttgc acatcacggg tggtgctccg gtaatcggcg tcgccgcgcg
      901 cgcgcgcggc gaaatccata taaaaggaag gtaaggtgat gaccccaata cgcgattttg
      961 tagtgcccga agaggattcg ataatggact ttttcgccgc ctgttcttcg agtttaatcg
     1021 tatcacgggt aagtgggatt atcgcaggcg aaccgccact tagcgccccc ttgggtagga
     1081 tttggagccg tacccgggtg ccttttggcc cgcggataag atcgacgaca tcatccaagc
     1141 gccagcccac gacgcttact atctcgcttt tctcattctc agccaccccg acgattcggt
     1201 cctcgggttg gagtttaccg ctcctggcgg caggcccgcc cgcgatgatc tgccgcacta
     1261 tcgtgtattc gttgtctgct tccaatacgg ctccaatccc ctcgagcgat aaactcatcc
     1321 ggatcttgaa atcc
//
LOCUS       DASQSL010000021         1076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_164982, whole genome shotgun sequence.
ACCESSION   DASQSL010000021 DASQSL010000000
VERSION     DASQSL010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164982"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..215)
                     /locus_tag="VE844_00235"
     CDS             complement(<1..215)
                     /locus_tag="VE844_00235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014433954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99839.1"
                     /translation="MRLPTYAIGIDSSTTATKAVVWDQDGRSVAEGRCAFPLTKPRPG
                     WQRTRVLHQRIGGVPVCGGGKGRHDRER"
     gene            complement(217..>1076)
                     /locus_tag="VE844_00240"
     CDS             complement(217..>1076)
                     /locus_tag="VE844_00240"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HZB99840.1"
                     /translation="SVPKTMDEYLEVIKEINKERAPKTYGTVGQIKSGHYSLECDWTA
                     WLWSQGGSVFNPDGECVVNDENGIAGLEYLMELKKYMPPGATTWDWSGEANAFAQGKG
                     GLYTAWGEFFPLYNTPDKSVVVKKVYPADPPKEKALRSPEDSGFEETPGIAHQGGSVY
                     AMSAYSNNKDALWVFLQWATSSDVQTRGSLLGGGASPMRQSTFDDSRIKEKQKPGGLT
                     QHFPVQERAIKTRMGTEPHLPSWPEIANDVFAVELGKLVTGGQNIATTANNMKKGADR
                     KTASFRGMA"
BASE COUNT          185 a          341 c          304 g          246 t
ORIGIN      
        1 cgttcgcggt cgtggcggcc tttgccgcct ccgcagaccg gtacacctcc tatgcgctgg
       61 tggagcaccc gggttctttg ccagccgggc ctgggtttgg tcaggggaaa ggcacaccgg
      121 ccctctgcaa ccgagcgccc atcttggtcc cacaccacgg ccttggtggc cgtggtggag
      181 gagtctatgc cgatggcgta cgtcggtaaa cgcatctcag gccatgcccc tgaagctggc
      241 ggtctttctg tcagcgccct tcttcatgtt gttagcggtg gtggcgatgt tctgcccccc
      301 ggttacgagc ttacctaact cgaccgcaaa cacgtcgttt gcgatctcgg gccacgaagg
      361 taagtgaggc tccgtcccca tgcgcgtctt gatcgccctc tcttgaaccg ggaagtgttg
      421 ggtcaagcct ccgggcttct gcttctcctt gatgcgcgag tcgtcgaagg tggactgccg
      481 catgggcgaa gcgccacctc ctaggagcga gccgcgcgtc tggacatcgc ttgaggtcgc
      541 ccactgcaag aatacccaca acgcatcctt gttgttcgag tacgcggaca tggcgtacac
      601 ggagcctccc tgatgagcga tgccgggagt ctcctcaaac cccgagtcct ccggagaccg
      661 caaggctttc tctttcggcg gatcggcggg atagactttc ttcaccacca ctgacttatc
      721 tggtgtgttg taaagtggga agaattcccc ccaagcagtg tagaggcctc ccttaccctg
      781 ggcgaatgca ttggcctctc ccgaccaatc ccacgtcgtc gcccccggtg gcatgtactt
      841 cttgagctcc ataaggtact cgagcccggc gatgccgttc tcgtcgttga ctacgcactc
      901 gccatccggg ttgaagaccg agcccccctg agaccacagc caggcggtcc aatcgcactc
      961 aaggctataa tgaccagatt taatttgccc gacagtcccg taggttttgg gggctcgctc
     1021 tttattgatc tcttttatca cctcgaggta ctcgtccatc gtcttgggca cggaaa
//
LOCUS       DASQSL010000022         1003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_96290, whole genome shotgun sequence.
ACCESSION   DASQSL010000022 DASQSL010000000
VERSION     DASQSL010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96290"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1003)
                     /locus_tag="VE844_00245"
     CDS             complement(<1..>1003)
                     /locus_tag="VE844_00245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006473549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HZB99841.1"
                     /translation="AQEQVDKQRIDFRRLGVFGDWEHPYLTMDFGFEANIVRALGRII
                     EAEHLQKGVKPVHWCTDCGSALAEAEVEYEDKDSPAIDVRFPVLDEAALLARCHHVPG
                     HEGQGQMAVVIWTTTPWTLPANQAVAVNPEVDYAVVQCGETERLVLAEALIKDALFRY
                     GIEDYRVVAYCRGADLEGLHLQHPFYPREVPIILGNHVTLDTGTGAVHIAPAHGQDDY
                     VVGNRYGLPMNNPVGDEGYFLPEVELFAGEFVFTANDHIIEVLKAHNMLVHHVRVRHS
                     YPHCWRHKTPIIFRATPQWFISMEGQGLRARALEQIGRVVWTPEWGELRIQGMVENRP
                     "
BASE COUNT          219 a          328 c          264 g          192 t
ORIGIN      
        1 ccgggcgatt ttccaccatc ccctggatcc gcaactcccc ccactcggga gtccagacga
       61 cccggccgat ctgctcgagc gcccgagccc tcaatccctg accctccatg ctgatgaacc
      121 actggggggt ggcgcggaag ataatggggg tcttatgccg ccagcaatga gggtagctat
      181 gacgcacccg cacatgatgc acgagcatgt tgtgcgcctt caatacctcg atgatgtggt
      241 cattagcagt gaacacaaac tcacctgcaa ataactcgac ctctggcaaa aaataaccct
      301 catcgcccac cgggttgttc ataggcaaac catagcggtt gcctactaca tagtcatcct
      361 ggccgtgggc cggggcgata tgtaccgcac cggtgccggt atcgagcgtg acatggttcc
      421 caaggatgat cggcacctca cgcgggtaga agggatgttg cagatgcaga ccctcgagat
      481 ccgcgcctcg gcagtaagcc accacccggt aatcctcaat cccataacgg aacagggcgt
      541 ctttgatcag tgcctccgcc aggaccaagc gctcggtctc gccacactgc accactgcgt
      601 aatcgacctc gggattgacc gccaccgcct gattggcggg caaagtccag ggggtcgtgg
      661 tccagataac caccgccatc tggccctgcc cctcatggcc cgggacatgg tgacaacggg
      721 cgagcagggc cgcttcatcg agcaccggga agcgcacatc gatcgccgga gagtccttgt
      781 cctcatattc cacctcggcc tcagctaagg ctgatccaca atcggtacac caatgcacgg
      841 gcttgacccc tttttgcagg tgctcagctt caatgatccg cccgagcgcc cgaacgatat
      901 tcgcttcgaa accgaaatcc atggtcagat aaggatgctc ccaatcgccg aagaccccca
      961 ggcgccggaa atctatccgt tgtttatcga cctgctcttg tgc
//
LOCUS       DASQSL010000023         1958 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_68894, whole genome shotgun sequence.
ACCESSION   DASQSL010000023 DASQSL010000000
VERSION     DASQSL010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1958
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68894"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..344)
                     /locus_tag="VE844_00250"
     CDS             complement(<1..344)
                     /locus_tag="VE844_00250"
                     /inference="COORDINATES: protein motif:HMM:NF018446.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022841 - potassium ion leak channel
                     activity [Evidence IEA];
                     GO_process: GO:0071805 - potassium ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM175 family protein"
                     /protein_id="HZB99842.1"
                     /translation="MLGTGERETSKDRDRIVNLSDGVFAIALTLLVLDIRVPDIPENL
                     VAADLPAALLSLWPKYLGYFLSFVGIGTFWLIHHSIFRNIRSYDRSLLCLNFFFLMFV
                     ALVPFPTSLLGE"
     gene            721..1365
                     /locus_tag="VE844_00255"
     CDS             721..1365
                     /locus_tag="VE844_00255"
                     /inference="COORDINATES: protein motif:HMM:NF016129.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HtaA domain-containing protein"
                     /protein_id="HZB99843.1"
                     /translation="MRTLTKSSFGSPGGGRAGMSAVALVTLASALALTLVALALSATP
                     AQSAERNANTTQVSGGKTLLKLDPDTAGALSDAGVKVEATGKATGPTGNGVFRFPIVG
                     GKVDKDPLGGQIVHSGGLAFSAGSERVVVQRFVIDLDRGVLTAEVAGTNQRIALLDLG
                     APKGGVKVSSERLVLKDINAKLTAQAAGALNEAFDTELFEEGLLIGEATVIVQL"
BASE COUNT          429 a          555 c          582 g          392 t
ORIGIN      
        1 tactcgccca gcagggaggt gggaaagggc accaacgcta cgaacatgag gaaaaagaag
       61 ttgaggcaga gcagactccg atcatagctc cttatgttgc ggaagatgct gtggtggatg
      121 agccagaagg tgccgatccc cacgaagctc aagaagtagc caaggtactt gggccacaag
      181 gagagtaacg cagccggtag gtcagcggcg accaggtttt ccggtatgtc gggcacccgt
      241 atgtcgagca ccaggagggt cagggcgata gcaaagacgc catcgctaag gttgacgatg
      301 cggtccctgt ccttgcttgt ttccctttcg cccgttccga gcactgattg cctcccaact
      361 tgctttgtcg ctgccggtag tctaggccag cgcgcagtag acaactgggc gagtagtccc
      421 tcctaacgcc tcgctagggc cggggtctat tagcctcggc cttccctctt gccagtattt
      481 acccgagtgc gtggaagagt agttctccga agttcgctag tacggagttc tccgacgttc
      541 gcttctcact tgccaactaa actccataaa taatcgattt gcccgattcg ctcacgggtc
      601 aattagatca tcgcaaatta gtcgatctgc ccgattcgcg ccagcccacc ctcttttagc
      661 atagcactac ttagagtggc cctaacggcc agccagccaa aaaaggaggc acacactacc
      721 atgaggaccc taaccaagag ctccttcggc tcccctggag gaggccgggc gggcatgagt
      781 gcggtggcgc tagtgacact cgccagcgcg ttggcgctga cactcgtagc tttggcgctg
      841 tcggcgaccc ccgcccaaag cgccgagcgg aatgccaata ctacccaggt gagcggtggg
      901 aagaccctgc tgaagctcga tccagacacg gcgggcgccc tctcggatgc gggcgtcaaa
      961 gtagaggcaa ccggcaaggc cacaggaccc accggtaatg gtgtcttccg ctttccgata
     1021 gtcggaggca aggtggacaa ggatccgctc ggcgggcaga tcgtgcactc cggagggctc
     1081 gctttcagcg ccggctcaga gcgcgtggtg gtgcagcgct ttgtgatcga cctggatcga
     1141 ggggttctga cagccgaggt ggccgggaca aaccagcgga tagcgttgct ggatctgggg
     1201 gctcccaagg gcggcgtaaa ggtcagctct gagaggctcg tgctgaagga tatcaacgcc
     1261 aagctgaccg cccaggcggc cggggcgctc aacgaggcgt ttgacaccga gctgtttgag
     1321 gagggtctgc tgataggaga ggccaccgtc atcgtccaac tctaggcgac gataccaacg
     1381 acgacgataa cgacgacaag aacaagcacg acgacgactg agcaatgagg gcgttgtgtg
     1441 gctaaacgcc taaccaaaat cgtctagaga tgcgagcata gagggcgggt ttctattaga
     1501 gtcccgccct catatgtttc tgggaacact ggtacggaca aacttcggag acctcccctt
     1561 ctaggtagtt gggtgaatag gggaggagtc gctgcgttct agcgacctcg gccctgttat
     1621 tgaccttatg caaccaagtg cgtggaactg gatttctcag aagttcgcac agtcccggtc
     1681 cctgctgagc aatattctta tgtacagagt aggggggcgc tcccctactc tgtacataag
     1741 aaacccataa gacctctggc aagtattatg gctcccccgt tggccaagct tatcggaccg
     1801 gagcagtgcc cagcgaagct accccgaaac tcgcatgtag ggggtctctg aagttcgcca
     1861 cttttaatcg gtgcttgcta gtgacatcgg tcggcgccgg agtccctgaa ctctcctccc
     1921 gccgtctcta agaaccgcca ctcgtaggct cctggact
//
LOCUS       DASQSL010000024         1290 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_68900, whole genome shotgun sequence.
ACCESSION   DASQSL010000024 DASQSL010000000
VERSION     DASQSL010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68900"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            15..98
                     /locus_tag="VE844_00260"
     CDS             15..98
                     /locus_tag="VE844_00260"
                     /inference="COORDINATES: protein motif:HMM:NF015365.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99844.1"
                     /translation="MCFSKSMEMHDIVIGLFVNRYEFGQPV"
     gene            259..>1290
                     /locus_tag="VE844_00265"
     CDS             259..>1290
                     /locus_tag="VE844_00265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99845.1"
                     /translation="MGTAAQPTRENRTITVDFRSEATYFQLLGDGKAFLECVLAFVMS
                     LGFQLKHKATCRGGGCLTRHSHYVRVRLGGLTIWRLQCTTCRTVFTVLPHFVLRSRQM
                     RPEVARDALLGTHGGLSLELCAVIGHISPMALYRLVCALGQQRVVTVLTRCGLPLPLY
                     FLVDEKHTRCLTNKAYLPTLVSGRVLWHLGYTEEASAAALTQSYGAFQCAVVQQEPSY
                     RVKGVLTDGFDSTTKSLRTLFPRARLGNCLRHALTKLPKKLVAIGSPIRQALRTQFHT
                     LLYRVRQRKSLHVFALGQRLRHFADHVTHTAGTANGERVWRWFQEKKAGWYVVLADPQ
                     MPVTSTFLDQ"
BASE COUNT          243 a          411 c          355 g          281 t
ORIGIN      
        1 tggcacgcaa gaccatctgc ttttccaaat ctatggagat gcacgacatc gtcatcggct
       61 tgtttgtcaa tcgttatgag tttggccagc ctgtttgaaa tgatgagatc cagatctaaa
      121 acaccaccaa aaatattaca cattccatcg cttttagtgg taacaccctg agccctttgc
      181 gattgtcttg agatttcaac gtgttatccc cattgtgtct cctcagctga cgacaacctg
      241 atgacagagg ggtgacacat gggaacagcg gctcaaccga cgcgagaaaa ccgcaccatc
      301 accgtcgatt tccggagcga agcgacgtac ttccagctgc ttggcgatgg gaaggcgttc
      361 ctcgaatgtg tcctcgcctt cgtcatgtcc ctcggctttc agctgaaaca caaagccacc
      421 tgtcgcggtg gcggatgcct gacgcgccac tcgcattacg tccgggttcg tctgggtgga
      481 ctcaccatct ggcgtctcca gtgcacgacg tgtcgcacgg tgttcacagt gctcccgcac
      541 ttcgtcttgc gctctcgcca gatgcgcccg gaggtggccc gtgatgccct gttgggcacg
      601 catgggggcc tcagtttaga gctgtgcgcg gtgattggtc acatctcgcc catggccctc
      661 taccgtctgg tctgtgccct cggtcagcag cgtgtggtca ccgtgctcac ccggtgtggg
      721 ctgccgctgc ctctctattt cctggtcgat gagaagcaca cgcgttgtct caccaacaag
      781 gcgtacctgc ccacgcttgt cagcggccgt gtgctctggc atctgggcta caccgaggag
      841 gccagtgcgg cggccttgac ccaatcctac ggcgcgttcc aatgcgcggt ggtccagcag
      901 gagccgtcgt accgggtcaa aggggtcctc accgatggct tcgacagcac caccaagagt
      961 ctacgcacgc tcttccccag agcgcgcctc ggcaactgcc tccgccacgc gctcaccaag
     1021 ctcccgaaga aactcgtggc catcgggtcc cctatccgtc aggcactccg cacgcagttc
     1081 cacacgctgt tgtatcgggt acgccagcgc aagagcctgc acgtgtttgc gctcggccag
     1141 cggttacgcc actttgccga tcacgtcacc cacacggcgg ggaccgccaa tggcgagcgt
     1201 gtatggcgct ggtttcagga gaaaaaagcc ggctggtatg tggtcctcgc agacccccag
     1261 atgccagtga ccagcacctt cttggatcaa
//
LOCUS       DASQSL010000025         1559 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_123915, whole genome shotgun sequence.
ACCESSION   DASQSL010000025 DASQSL010000000
VERSION     DASQSL010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1559
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123915"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(189..1184)
                     /locus_tag="VE844_00270"
     CDS             complement(189..1184)
                     /locus_tag="VE844_00270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013156564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZB99846.1"
                     /translation="MNPPKADELDYIHFLIAAQKVFTCTEAARCQPNHLDPPAHDAFT
                     RLLTREPPDTEALWEEAKTLVEPERGLLVVDDTTLDKPYSTKMELVHRHWSGKHRRVV
                     NGINLATLLWSKAEALVPTDFRVYDKPRDGLTKNDHFRAMLEQAKERGFEPRYVLFDS
                     WYSSLDNLKAIRSYGWRWLCRLKSNRLVNPDKSGNVAIEEIEIPAEGRIVHLKAHGMV
                     KVFRTVARDGGAEHWATDDFEMSESEREELEGAGWGIETYHRGLKQCCGIERAQARGA
                     QAQRNHLGLALRAFLRLEANRLENGASWYEAKISIVRDAVRRYLAEPLYLLSPTA"
     gene            1346..>1559
                     /locus_tag="VE844_00275"
     CDS             1346..>1559
                     /locus_tag="VE844_00275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99847.1"
                     /translation="MSRFTSYGICALCGKRTTKAAMTRHLGSCLAEHEPSRGKAARLL
                     RLRVEDAFSPIFWMDVEIKANATLEEL"
BASE COUNT          283 a          491 c          428 g          357 t
ORIGIN      
        1 tcgtgagaga tccgggcgcg ctttattgcc ttaacgtttc tccaatgaaa cggaggtttt
       61 gagagtagtc gagtactggt tcgaaccagc gatctctgcc atgcggagtc tgtgagatgg
      121 ttttctagag gtttctgaag cgtgcaaaca gcccgcaaac aacggcattc ctcgaatact
      181 gctaggactt acgcagttgg agacagcagg tagagtggct cggccagata cctcctgacc
      241 gcatcccgta cgatcgagat cttcgcctca taccaacttg cgccattctc tagcctgttg
      301 gcctccaacc tcagaaatgc tcgcagcgcc agccccagat gattcctctg cgcctgcgcc
      361 ccccgcgcct gtgccctttc tatcccgcaa cactgcttca agccccggtg ataggtctct
      421 atgccccaac ccgccccctc cagctcttcg cgttcagact cgctcatctc aaagtcgtcg
      481 gtggcccagt gctcggcgcc gccgtctctg gcaactgtcc tgaatacttt caccatcccg
      541 tgggccttga gatgcactat ccgtccctct gcggggatct ctatctcctc gatggcgacg
      601 ttgccgctct tatccgggtt caccaagcgg ttactcttta gccggcacag ccagcgccat
      661 ccgtagctgc ggatagcctt gagattgtcc agggagctgt accaggagtc gaacaagacg
      721 tagcggggct caaagcccct ctctttagcc tgctccagca tcgctcggaa gtggtcgttc
      781 tttgtaaggc cgtcgcgagg cttatcgtag acccggaagt cggtgggcac cagcgcctct
      841 gccttactcc atagcagggt ggcgaggttg atcccattga ccacccggcg atgcttgccg
      901 gaccagtgcc ggtggaccaa ctccatcttc gtggagtagg gcttgtccag agtggtgtcg
      961 tccaccacca acagcccgcg ctcgggctct accagcgttt tcgcctcctc ccacaaggcc
     1021 tccgtgtcgg gaggctctct ggtcagtagc cgggtgaagg cgtcatgcgc tggtggatcg
     1081 aggtggttgg gctggcagcg ggccgcctcg gtgcaggtga agaccttctg ggcggcgatc
     1141 aagaagtgga tgtagtctag ctcatcggct ttgggtggat tcatctgcta gctcccggag
     1201 gccatcatgc tctcgctatc ttacataccc tgctcgccca ctacttcgcc ttgttcgttc
     1261 ggctcgattc agctcaagct agcgcgaatg ccgctttcca catttccaat ttcgcttccc
     1321 agaagacgaa gatagaatga ccggcatgag ccggtttacc tcctacggta tctgcgccct
     1381 ctgcggtaag cgcactacca aagcggcgat gacgcgccac ctggggagct gtctggccga
     1441 gcacgaacct tcccggggaa aggccgcacg gctccttcgt ctgcgggtcg aggacgcctt
     1501 ctctcccatc ttctggatgg atgtagagat aaaggccaac gccaccctcg aagagttgg
//
LOCUS       DASQSL010000026         1631 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_151428, whole genome shotgun sequence.
ACCESSION   DASQSL010000026 DASQSL010000000
VERSION     DASQSL010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1631
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151428"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(230..1414)
                     /locus_tag="VE844_00280"
     CDS             complement(230..1414)
                     /locus_tag="VE844_00280"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZB99848.1"
                     /translation="MALTCLPSWVSQCLRVLGPCFRHRHRLVFSWLLVLHLVYGERAN
                     LKELARHGPTHLAYQHYRRLLCATYWCTKTLLWWFVEQALQAFPPPEDGVLYLIGDST
                     PKGKRGPKHPVAQKTRLSQHHPYVFGFRIVLLMAQWGVYRIPVDFALLRRKDAPSYQT
                     ENALFRQMLREFQPPAWCQEVIVVADAAYASKDNLALIQELGYWYVLAFPRTWKFTNG
                     KTLKALVTHLPRWWYTQIRLPTASGRRRTFWVYAKGVRLRHLGDVTVVLSKCRRNDGP
                     TQTKILVTNLPETVPARQIVAIYLRRWWVEVLIKELKGVVGLGQHQVTKEVGRVERSV
                     AVAIMAYLLLLQLRAQDIPANRPWSAFRLQRVFAWEVIQAQCERSALRMARKWLQLGK
                     AA"
BASE COUNT          359 a          461 c          495 g          316 t
ORIGIN      
        1 ccgtttgacg cgggcggata ttgaaggctt tatgcagtat ctggccgccc agcgcatgag
       61 cggggtgacg cgggtgcgga agttggccgc gatccgcaaa ttcttcgcct ttatggcgga
      121 gaataagatt cttcagggca acccggccta tacggtgaag ggggcgaggc gggaggagaa
      181 agagcccaat attctgtata actcaaaagt gacaggtaac cgaatggcat cacgcggctt
      241 tgcccagttg aagccacttc cgagccattc gaagggccga acgctcgcat tgggcctgta
      301 tcacctccca ggcgaacacc cgttgcagac gaaacgcgct ccacgggcgg ttggccggga
      361 tgtcttgcgc ccgcagctga agcaacagga gataggccat gatggcgacc gctaccgagc
      421 gttcgacgcg tccgacttcc ttggtcacct gatgctggcc caagccgacc acccctttca
      481 actctttgat caagacctcc acccaccagc gccgcagata aatagccacg atttggcgcg
      541 ccggcacggt ttcgggcaga ttggtcacga ggattttcgt ctgtgtcggc ccatcgtttc
      601 gccgacactt gctgaggacc accgtgacat ctcccagatg gcgcaggcgc acccctttgg
      661 cgtagaccca gaaggtgcgg cggcgaccac tggctgtggg aagccggatc tgggtatacc
      721 accagcgcgg cagatgggtg accagggctt tgagggtctt tccattggta aacttccagg
      781 tgcggggaaa ggccaataca taccaataac ccaactcctg gatcaaggct aggttgtctt
      841 tagaggcata agcggcatcg gccacgacga tgacctcttg gcaccaggcc gggggctgga
      901 actcccggag catctgccga aacagcgcgt tttcggtctg gtagctgggg gcgtccttgc
      961 gccgcagcag cgcgaaatcc actgggatgc gatagacacc ccactgggcc atgaggagca
     1021 cgatccggaa gccgaagaca tagggatgat gctggctaag gcgggttttt tgcgcaactg
     1081 gatgttttgg gccccgcttg cccttggggg tgctgtcgcc gatgagatag agcacgccat
     1141 cctcgggagg gggaaaggct tgcaaggcct gctcgacgaa ccaccacagc agggtcttcg
     1201 tgcaccaata ggtggcgcac aacaggcggc ggtagtgctg ataggccaaa tgggttggac
     1261 catgccgcgc cagctctttc agattggctc gttcgccata cacgaggtgc aacaccaaca
     1321 gccagctgaa caccagccgg tgccgatggc gaaagcaggg ccccagcacc cgcagacact
     1381 gtgagaccca gctgggcaaa caggtcaagg ccatggtccg agcctcctgg ggaatacgcg
     1441 atctgtcggg cgttgacgat caagtatccc tgggagcgcc tggactgtaa agggttttca
     1501 gacccgacta tgagcaaacc tgtcgccttt gagttactta ggcgtctttt cgtgaccgga
     1561 ggagtttaca attttagaca tcaataggag gtaacaacat acatctatgc atccttgcaa
     1621 ccatcatcat c
//
LOCUS       DASQSL010000027         2533 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_137640, whole genome shotgun sequence.
ACCESSION   DASQSL010000027 DASQSL010000000
VERSION     DASQSL010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2533
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137640"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(42..272)
                     /locus_tag="VE844_00285"
     CDS             complement(42..272)
                     /locus_tag="VE844_00285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005003295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HZB99849.1"
                     /translation="MTDPTAQTNRATRAGQATPNDKNRYEVNEDDLPLHCPLPSMSLW
                     NSHPRVYLPIEATGEAKCPYCGADFVLANRKW"
     gene            complement(283..1206)
                     /locus_tag="VE844_00290"
     CDS             complement(283..1206)
                     /locus_tag="VE844_00290"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002684522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transaminase"
                     /protein_id="HZB99850.1"
                     /translation="MTMTDRDGQIWLDGEMLPWREAKIHVLTHTLHYGMGVFEGIRAY
                     KTLKGTAIFRLQEHTERLFRSARIVGMPMPYDPATINRVCCEAVRANKLESAYIRPLC
                     FYGAEGMGLRADNLKPHVMIAAWYWGAYLGTAGQEHGIRVKTSSFARHHVNAAMCKAK
                     ANGNYMNSMLALQEALQCGYDEALLLDTEGYVAEGSGENIFIIRNGILYTPDLTSALE
                     GITRDTIITLAAELGLTIKEKRITRDEAYIADEAFFTGTAAEVTPIRELDGRAIGAGR
                     PGPITLQLQSMYFDQVYGRRETHPDWLTLVI"
     gene            complement(1226..>2533)
                     /gene="glnE"
                     /locus_tag="VE844_00295"
     CDS             complement(1226..>2533)
                     /gene="glnE"
                     /locus_tag="VE844_00295"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: protein motif:HMM:NF008292.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008882 - [glutamate-ammonia-ligase]
                     adenylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HZB99851.1"
                     /translation="AVRRSSNPATTLTRLTPLLETTAQRSAYLALLAEYPAALEHLIR
                     LCSASPWIAAYIARQPILLDDLLDPRTLYSPPGPAEMETQLTEQLSHLSEADLEQEMN
                     ALRHFKHSQVLRVAAADLTGVLRVRTVSDQLSAIAETVLKAALRLAWDDLIGRHGEAR
                     CVDAGVDRPAGFAIVAYGKLGGLELGYGSDLDLVFLHDSRGEKQLTTGPKSLDNQEFF
                     ARLGQRIIHLITTITPAGKAYDIDARLRPSGSSGLLVSSLNAFAEYQQHHAWTWEHQA
                     LVRARPVAGSPATREEFSTIRAAVLSRERDEASLKQDVRDMRERMRRELGNHEPDRFD
                     LKGGQGGITDIEFMVQYIVLRWAAAHPLLLSSTANCPLLEIGAACKLLDPHGAEALCE
                     AYFAYRARIHALALQEQPARVSEGEFRTHRSKVVDIWRRLLEA"
BASE COUNT          524 a          740 c          747 g          522 t
ORIGIN      
        1 gaatagccct cccagagcct ttaaacaggt agataatcgc ctcaccattt acgattggcc
       61 agcacaaaat ccgcaccgca atagggacac ttggcctccc cggtcgcttc gatcggcagg
      121 tacacacgcg gatgcgagtt ccacaagctc atgctcggta atgggcagtg caaaggcaga
      181 tcgtcctcat tcacttcata gcggttcttg tcattgggtg tggcctgtcc ggcccgagtt
      241 gctcggttgg tttgggcagt aggatcagtc atagtttccc tatcagatca cgagggttaa
      301 ccagtcggga tgggtctctc ggcggccata tacctgatcg aaatacatgc tctggagttg
      361 cagggtaatg ggaccgggcc ggcctgcgcc aatcgcgcgt ccatcgagtt cccggatcgg
      421 tgtcacttcc gctgcggtgc cggtgaaaaa ggcctcgtcc gctatatagg cctcgtcgcg
      481 ggtgatgcgt ttctctttga tcgtgaggcc gagctcggct gccagggtaa tgatcgtatc
      541 ccgggtgatg ccctcgagcg ccgaggtaag atcgggggta tagagaatac cgttgcgtat
      601 gataaagata ttctcaccgc tgccttccgc gacatagccc tcggtatcga gcagcagggc
      661 ctcatcatag ccgcattgca gcgcctcctg cagggccaac atcgaattca tatagttgcc
      721 gttggccttg gccttgcaca tggcggcatt gacatgatgg cgggcaaagg aggaggtctt
      781 cacccggatc ccgtgctctt gacctgcggt cccgaggtag gccccccaat accaggccgc
      841 gatcatgaca tggggcttga gattatcggc gcgtagcccc atgccctcag ccccataaaa
      901 acacagagga cggatgtaag cgctctcgag cttgtttgcg cgcaccgcct cacagcacac
      961 ccggttaatg gtagccggat cgtagggcat cggcatgccg acgatgcgcg ctgagcgaaa
     1021 caggcgctcg gtgtgttctt gcaagcggaa tatcgctgtc cccttgagag ttttataggc
     1081 gcgtatgccc tcaaacacac ccatgccata atgcagggta tgggtcagca catggatctt
     1141 tgcttcacgc caggggagca tctccccatc aagccagatc tggccgtcgc gatcggtcat
     1201 ggtcatggta ttgcctctca ggcttctatg cctctaataa acgtcgccag atatcgacga
     1261 ccttactgcg atgtgtcctg aactccccct cgctcacccg ggcaggctgt tcctgtaagg
     1321 ccagtgcgtg gatcctggca cggtaagcaa aataagcctc acacaaggct tctgcgccgt
     1381 gcggatcgag caacttacag gccgcaccga tctccagcaa gggacagttg gcggtggaac
     1441 tcaggagtaa tggatgcgct gccgcccagc gcaaaactat atattgcacc ataaattcga
     1501 tatcagtaat accaccctgc ccccctttta gatcaaaccg gtccggttcg tgattaccga
     1561 gttcccggcg catgcgctcg cgcatgtccc ggacatcctg cttgaggctc gcttcatccc
     1621 gttctcgact aagaacggcg gcgcggatcg ttgaaaattc ctccctagtc gcgggagacc
     1681 ccgcgaccgg tcgggctcgg accagggcct ggtgctccca cgtccaggca tgatgctgtt
     1741 gatactcggc gaaggcattg aggctactca ccagtaagcc cgaagatccg ctcgggcgca
     1801 gacgggcatc gatatcgtag gccttgcccg ccggggtgat ggtcgtgatc agatggatga
     1861 tgcgctggcc gagacgggca aaaaactcct ggttatcgag ggacttgggg ccggtcgtca
     1921 gctgcttctc cccccggctg tcgtggagaa acaccagatc cagatccgag ccataaccga
     1981 gctcgagccc gccgagcttg ccataggcca cgatagcaaa gcccgccggg cggtcaacac
     2041 cggcatcgac gcacctcgct tcgccatggc ggccaatcaa gtcatcccag gccaagcgca
     2101 atgcggcctt taataccgtc tcggcaatgg cggagagctg atcgctcacg gtacggaccc
     2161 gcaggacacc ggtcagatcc gcggctgcga cccgaagcac ctggctgtgt ttgaaatgcc
     2221 tgagcgcatt catctcttgc tccagatccg cctcggagag gtgagacaac tgttcggtca
     2281 gttgcgtctc catctctgcg ggtcccgggg gcgaatacag ggtgcgtgga tccaagagat
     2341 catccaatag gatcggctgg cgagcgatat aggcagcgat ccaggggctc gccgagcaga
     2401 gccttatgag atgttcaagc gcggcgggat attcggcgag gagagcgaga taggcactac
     2461 gttgggcggt agtctcaagg aggggcgtaa gccgcgtaag tgttgtggct ggatttgagg
     2521 agcgccgcac agc
//
LOCUS       DASQSL010000028         1186 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_178826, whole genome shotgun sequence.
ACCESSION   DASQSL010000028 DASQSL010000000
VERSION     DASQSL010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1186
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178826"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(203..352)
                     /locus_tag="VE844_00300"
     CDS             complement(203..352)
                     /locus_tag="VE844_00300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99852.1"
                     /translation="MVKELRLPTRAGFVIGKDGHTKHAEYVRGFIEEPDYGPLIEAAR
                     QAAAE"
BASE COUNT          221 a          340 c          368 g          257 t
ORIGIN      
        1 ggggagttca actcccaggt ggcgcgggtg aacgccctaa cccggctgac ggacgtcggc
       61 gggcggaggg atttctggga actcgtcgag gcgcaggaga agggggcacc ggcgcgtcct
      121 tcgggtgatc ccctatagtg cctatgcacc cgagtgcgtg gaagtgatgt tctctgaagt
      181 tcgctatagg ctgaggggcc acctattcag ctgccgcttg tctggcagct tcgatcagcg
      241 ggccatagtc cggctcttcg atgaagcccc ggacgtactc agcatgcttg gtgtgcccgt
      301 ctttgccgat gacaaacccg gctcgggtgg gcagccgcag ctctttgacc aagaccccgt
      361 aatcgatacg aactgttcgt tcctttgggc cgaggcagtt cggtgtccta cctcttcagt
      421 ctcgcaccag gcggcttgtg cgaacgggag gtccatgctg acggtgagca actcgatctg
      481 ctcccccagc ttggctcgct cctgctccca gcgccgcgtc tccaagctgc agacccgggt
      541 gttcagggag ggcacgcagc tcagtagcac gaccttaccc ccagcttcga cagtcgcacc
      601 ggcggcaacc ctccggtgac gattggggtg atcgccggac tcgccgggct gagttcgaag
      661 tcaggggcca catcgcccag ctcaaacggt ataccaacga gcgtgagcgg attgccacgc
      721 agcgttgtcg cgctcggccg ctcctccgtc atggtgtcct tccttccata aacccaacat
      781 aacctgttgc cgccaatatg ctctgctctt ctagtggcgt caacctcatc gggggctggg
      841 gtcctatacg ggagtcggtc gctctgctaa gccagtatta ggggcagggc tacagtatta
      901 ggggagggtt aataacggcc gatcctctct taccattgtt cacccaagct cgtagagaaa
      961 cggtttggaa aagcgagcgg ggcgggtcga taacgtacgc tcctggtggc gagccttatt
     1021 catccggtcg cctgcgatag gttttctcgg aagttagccc cttttcgcta taaaagtttc
     1081 aataaatagt tcatttggag gatacgcagg gctttgctgc ggggcaccat gtttatggtg
     1141 gaaagcgtgg ggcgactcgc aaggcgataa gcgagtcagg aaggag
//
LOCUS       DASQSL010000029         1473 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_27595, whole genome shotgun sequence.
ACCESSION   DASQSL010000029 DASQSL010000000
VERSION     DASQSL010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1473)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1473)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1473
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27595"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..157)
                     /locus_tag="VE844_00305"
                     /pseudo
     CDS             complement(1..157)
                     /locus_tag="VE844_00305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013490995.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
     gene            216..1316
                     /locus_tag="VE844_00310"
     CDS             216..1316
                     /locus_tag="VE844_00310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018816587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZB99853.1"
                     /translation="MSALRGVLTADQRDQLNCLTRDRSVDAVLALRARLVLWWDDGHS
                     AVQIAEWAGVADKTARLWPARYAESGIDGLHGMPHPGKRRVHDERIRSRILALSRTSP
                     PEHTGLSHWSSREMAKYLKRHEGIEVSHVFVADLWREHGLKPHRQDTFKLSRDPDFAE
                     KVADIVGLYLSPPAAAVVLCVDEKSGVQALDRTQPLLPMTFDRTEKRTHDYVRHGTVN
                     LFGALDVATGKVTGECYPRRGSEEFLAFMKTIAAQYVDCEVHVVVDNLGTHFTAEVRD
                     WLADNPNITFHRTPVGASWINQIEIWFGLITRQAIRRGTFSSVKQLITTIENYIANWN
                     ADCKPFSWTADADTILAKVRWIESEVHKLTGH"
BASE COUNT          294 a          422 c          447 g          310 t
ORIGIN      
        1 ccgcgcgatc tgggtgtcac cgagcagcac ctcgacgccg tcaaacgcac tcccagccgg
       61 tcagccacga cctgactcca cgccgtctcg tgcccctgcc catgtgggca aacccggtga
      121 ctacctcgac cttgccagta gggagcatcc gaacactagt gttgtgtaag cgtgtcgcgg
      181 tccgttgatc acccctgcat gagattattc agcgcatgtc tgctttacgt ggtgtcttga
      241 ctgctgacca gcgtgatcaa ttgaactgtc tgactcggga tcggtcggtg gatgccgtgc
      301 ttgctttgcg ggctcggctg gtgttgtggt gggatgatgg ccattcagcg gtccagattg
      361 cggagtgggc tggtgtggcg gataagaccg cgcggttatg gcctgcgcgg tatgcggagt
      421 cgggtatcga cgggctccat ggcatgccgc atccggggaa gcgacgagtg cacgatgagc
      481 gcattcgttc ccggatcctt gcgctaagca gaacgagtcc gccggagcac actggtttgt
      541 cgcattggtc gagccgagag atggcgaagt atctgaaacg gcacgagggt atcgaggtgt
      601 cgcatgtgtt tgtagccgat ctgtggcgcg agcatggtct caagccgcat aggcaggaca
      661 cgttcaaact gtcacgggat ccggacttcg ctgagaaggt cgctgatatc gtgggcctgt
      721 acctgtcccc acctgcggct gcggtggtgc tgtgcgtaga cgagaagtcg ggcgtgcagg
      781 ccctggaccg gacccagccg ttgctgccca tgaccttcga tagaacggaa aagcgaacgc
      841 acgactacgt ccgacacggc acagtcaacc tgttcggagc gttggacgtc gcgacgggta
      901 aagttaccgg cgaatgctat ccgcggcgcg gatcagaaga gtttctggcg ttcatgaaga
      961 cgatcgctgc ccaatacgtc gattgtgagg ttcacgtcgt cgtggacaac cttggtacgc
     1021 acttcactgc cgaggtgcgc gactggttgg ccgacaatcc gaacatcacc ttccatcgca
     1081 caccggtcgg agcgtcgtgg atcaaccaga tcgagatctg gtttggattg attacgcgcc
     1141 aagcgatccg ccgaggaaca ttcagctcag tcaaacagct catcaccacg atcgagaact
     1201 acatcgccaa ctggaacgcc gactgtaaac ccttctcatg gaccgccgac gccgacacaa
     1261 tactcgccaa agtccggtgg attgagtcag aagtccacaa gcttacggga cactagtttc
     1321 gtggtcacct ctaaaggtga ttcagccagc gggacaggtt gcggattttc cgtctccatc
     1381 agtggtgggc cctcttgttc gcaatcacgc tactggcgtc gctactcctc gatcacacga
     1441 atccggccat gcgcatctgg acggccctgg cat
//
LOCUS       DASQSL010000030         1268 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_55201, whole genome shotgun sequence.
ACCESSION   DASQSL010000030 DASQSL010000000
VERSION     DASQSL010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1268
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55201"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            240..815
                     /locus_tag="VE844_00315"
     CDS             240..815
                     /locus_tag="VE844_00315"
                     /inference="COORDINATES: protein motif:HMM:NF024776.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZB99854.1"
                     /translation="MVNPFYTFFIEVSQHLLNHWIAGSRQVLGLLGAGGKRRPTPAVI
                     DPVPGGRIVLSERQERLLEALVRRSSAPQRLVKRAQMILLLAAGKKFNQEARALGVLR
                     QTVYKWGKRWRTQARRLAEVEGQACPDHVLSGVLEGLLMDAYRAGKPATFSPEQIVKL
                     IAVACEPPQHSGRPITRWSSRELAAVQASCL"
     gene            812..>1268
                     /locus_tag="VE844_00320"
     CDS             812..>1268
                     /locus_tag="VE844_00320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZB99855.1"
                     /translation="MMSAEMVKRGIAKRIARSTISQLLKEAKIKPHLSRYWLNAQPED
                     EAVFDAQVRVVCALYRQATQLHKRGIHLVSTDEKTGIQALQHKYPAKPVRAGQVACLE
                     HEYDRHGTLCLIANLEVATGRMVAPSVGPRRTEADFLAHIQQTVALAPQD"
BASE COUNT          259 a          371 c          390 g          248 t
ORIGIN      
        1 accccaacaa caccagtgct gttgatagcc cagccttcca ctccattccc ctcgtcagaa
       61 gaagcccgaa tcccagagag ctttttgcta tgcccacgaa tcgcataatc ggtctcgcta
      121 gtacacctgc cgagaaattc gtatacaact gctggtggtt gcacaaacga acaccctgcg
      181 ctagctcagt gccacgcctg ctggggtagt catcatttgc cccaaggaac ctaaccttta
      241 tggtcaatcc cttttatacc ttctttattg aggtcagcca gcacctactg aatcactgga
      301 tcgctggcag ccggcaagtg ctggggctgc tgggcgcggg gggcaagcgc aggcccacgc
      361 ccgcggtgat tgacccggtg cccgggggga ggatcgtgtt gagtgagcgg caagagcgct
      421 tgttggaagc gttggtgaga cgctcgagtg cgccgcagcg attggtcaaa cgcgcccaga
      481 tgattttact gcttgctgcc ggcaagaagt ttaatcaaga ggcgcgggcc ttgggggtgc
      541 tgcgtcagac cgtctacaag tggggtaagc gttggcggac acaagcgcgg cggttggccg
      601 aagtggaggg gcaggcgtgc cccgatcacg tgctgagcgg agtgttggaa gggctactga
      661 tggacgccta tcgggctggc aaacccgcca ccttcagccc cgagcagatc gtcaagctga
      721 ttgccgtagc ctgtgaaccc ccgcagcact cgggccggcc gatcacgcgc tggagttcgc
      781 gggagttggc cgctgtacag gcgtcctgcc tatgatgtct gctgagatgg tcaaacgggg
      841 gattgcgaag aggatcgcgc gcagcaccat cagtcagctg ttaaaggaag cgaagatcaa
      901 accgcatctg agtcgctact ggcttaatgc tcagcccgag gacgaggccg tctttgatgc
      961 ccaggtgcgc gttgtctgtg cgctctatcg ccaggccact caactccata agcgtgggat
     1021 tcatctcgtg tctaccgatg agaaaacggg tattcaagcc ttgcaacaca aataccccgc
     1081 caagccggtg agggcgggtc aggtggcctg ccttgagcat gaatatgacc gccatggcac
     1141 gctgtgcctg atcgccaact tggaagtcgc caccgggcgg atggtagcgc ccagcgtggg
     1201 gccgcgccgc accgaggccg actttttggc ccacatccag caaaccgttg ccctggcacc
     1261 gcaggacc
//
LOCUS       DASQSL010000031         1365 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_178848, whole genome shotgun sequence.
ACCESSION   DASQSL010000031 DASQSL010000000
VERSION     DASQSL010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1365)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1365)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1365
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178848"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            134..430
                     /gene="rplW"
                     /locus_tag="VE844_00325"
     CDS             134..430
                     /gene="rplW"
                     /locus_tag="VE844_00325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012800373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HZB99856.1"
                     /translation="MNNERLLTLLRAPRISEKATRLADTHKQFIFEVVKAATKPDVKQ
                     AVELMFKVQVASVQMCNVKGKIRSFRRKPGRRPNIKKAYVRLKPGFDIDFIGLK"
     gene            442..1272
                     /gene="rplB"
                     /locus_tag="VE844_00330"
     CDS             442..1272
                     /gene="rplB"
                     /locus_tag="VE844_00330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009206582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HZB99857.1"
                     /translation="MALVKLKPTSPGCRGVARVATPELYQGPPHWPLLEKQTRTIGRN
                     NQGRITTRHRGGGHKQQYRIIDFKRDKDGIPAQVERIEYDPNRSAHIALLLYVDGERR
                     YIIAPKGVQSGSKLMSGSQAPIEPGNCLPLRNIPLGTTVHCVEMQAGRGAQLGRSAGA
                     GIQLIAREGGYATLRLRSGEIRKVVIDCRATIGEVGNAEHSLRSLGKAGATRWRGKRP
                     TVRGVAMNPVDHPHGGGEGKTSGGRHPVSPWGQPTKGHKTRRNKRTRRMIVRRRNSGS
                     "
BASE COUNT          333 a          316 c          423 g          293 t
ORIGIN      
        1 tttatctagc cgggcgaaat ctccagggtg tttctatcat cgagatcaca gcccttgatc
       61 cggtgagcct gattaatttt gctaaggtcg tgtttactaa tgcggcgata cagcggctgg
      121 aggccgggct gacgtgaata atgaacgatt attgacactt ttgcgggcac cgcggatctc
      181 tgagaaagca acacgccttg cagatactca caagcaattt atatttgagg tcgtaaaggc
      241 ggctactaaa cctgatgtta agcaggccgt cgagttgatg tttaaggttc aggtagcctc
      301 tgttcagatg tgtaatgtca agggtaagat ccgatcgttt cgcaggaagc ccgggcggcg
      361 gccaaacata aaaaaggctt atgtaaggct taaaccgggg tttgatatcg attttatagg
      421 cttgaaatga gcaatagata gatggcactg gtcaaactca aaccgacctc tccgggctgc
      481 cggggtgtgg cgcgtgtcgc gactccggaa ctctatcaag gtcctcctca ctggccgctt
      541 ctcgagaagc aaacccgaac gatcgggcgc aacaatcaag gccgaattac tacacggcat
      601 cggggtgggg ggcataaaca acagtatcgg ataatcgatt ttaagcggga taaggacggt
      661 attcctgccc aggttgaacg gatcgagtat gatcccaacc gaagcgcgca tatcgcattg
      721 ttgttgtatg tggatggtga gcggcgttat atcattgcgc ctaaaggtgt gcaatcaggg
      781 agcaagctta tgtctgggag ccaggcgccc attgagcctg gaaattgcct gccgctacga
      841 aatatcccgc tcgggaccac ggtgcactgt gtggaaatgc aagccggcag aggtgcccag
      901 ctcggccgaa gtgcaggcgc agggatccaa ttgatcgctc gagaaggtgg ttatgccacc
      961 ttgcgactgc gatccgggga gatccgcaag gtggtgatag actgccgggc gactatcggg
     1021 gaggtaggta atgctgaaca ttcactgcgc agtttgggca aagcgggtgc cacgcgatgg
     1081 cgtgggaaaa gaccgacggt ccgaggggtg gcgatgaatc cagtggatca ccctcatggc
     1141 gggggcgagg gaaaaacctc gggcggacgg catccggtga gcccttgggg gcagcctacc
     1201 aagggccata agacgcgccg aaataaacgc actcgccgaa tgatagtgcg gcgtagaaac
     1261 agcggttcat aggtgatgag gtattcgcgt gccacgatcc gtttataaag ggccttttgt
     1321 ggaccagcat ctggcggtta aggttcagaa ggcgcgggtc actaa
//
LOCUS       DASQSL010000032         1782 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_288, whole genome shotgun sequence.
ACCESSION   DASQSL010000032 DASQSL010000000
VERSION     DASQSL010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1782
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_288"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(103..1482)
                     /locus_tag="VE844_00335"
     CDS             complement(103..1482)
                     /locus_tag="VE844_00335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011356056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-containing oxidoreductase"
                     /protein_id="HZB99858.1"
                     /translation="MATTYDAIIIGTGQAGPSLAVRLASAGMKVAIVERKRFGGTCVN
                     TGCIPTKTLVASARAAHIARRASEYGVVIDSSITVDMKKVKERKDAVVRRSNEGLEKW
                     LKSTQNLTAYEGHARFEDARRIRVGDDLLEAGKFFINVGGRASTPPLPGLDQVSYLNN
                     STMMEVDFLPEHLIVVGGSYVGLEFAQMYRRFGSEITIVEMGPRLVQREDEDVSEAIK
                     TILENEGINIRVDAECIALENHGKKVAVNVDCSSGDKTVVGSHVLLAVGRVPNTEDLG
                     LENAGVAVDRRGYIQVDDELRTNVPGIYALGDCNGRGAFTHTAYNDYETVAANLLDGD
                     PRRVSDRITAYALYIDPPLGRAGMTEAEVRKSGRKALLGKRPMARVGRAVEKGETQGF
                     MKILVDAETKEILGASLLGIECDEVIHSILDVMYAKAPYTVIQRAMHIHPTVTELLPT
                     MLGELKPLE"
     gene            complement(1526..>1782)
                     /locus_tag="VE844_00340"
     CDS             complement(1526..>1782)
                     /locus_tag="VE844_00340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020711105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZB99859.1"
                     /translation="GRMRAGWAYFASFGQAAKDFAQLSQIKLSMPALAIGGEQANGEL
                     LGQQTRIVASDASVVVLKDTGHWVLEENPKETTDALMNFL"
BASE COUNT          357 a          532 c          461 g          432 t
ORIGIN      
        1 ccgcccttgt gctcgtctga aacaaacgcc tgatgtcctg cttcgattgc ttcctgcata
       61 gtcctgccgt cccaaactcg ccaatgttag tttcacaccc gttcactcca acggcttcaa
      121 ctcgccgagc atggtcggta acaattctgt gacagtcgga tgaatgtgca tggcgcgctg
      181 gatcactgta taaggcgctt tggcgtacat cacatccagg atggaatgaa taacttcatc
      241 gcattcgata cccaggagcg acgctccgag gatctctttg gtctcggcgt ctaccagaat
      301 tttcatgaat ccttgtgtct cgcctttctc cactgcgcgg ccaacgcgtg ccatcgggcg
      361 tttcccaagt aacgctttcc ggcctgactt tcggacctcc gcctcagtca ttcctgcccg
      421 gcctaacggc ggatcaatgt agagggcgta ggcagtgatg cggtcgctca cacggcgcgg
      481 gtcgccgtcc aaaagattgg cagcaacggt ctcgtagtca ttgtaggcgg tgtgagtgaa
      541 agctcctcgt ccgttgcaat cgcccagggc atagataccg ggtacattgg tgcgaagctc
      601 gtcatctacc tggatgtaac cgcgccgatc cacggcgacg cccgcgtttt ccagaccgag
      661 gtcctcggtg ttcggcacgc ggcccactgc gagcagcaca tgggagccga cgactgtctt
      721 atcgccactg ctgcaatcga cattgacggc taccttcttg ccgtggtttt ccagggcgat
      781 acattcagcg tcgactcgga tgttgatgcc ttcgttttcg aggattgtct tgatggcttc
      841 ggaaacgtct tcgtcttcac gctgaaccag gcgcggcccc atctctacaa tcgtgatctc
      901 actgccaaac cggcggtaca tctgagcaaa ctccaaacct acatagctgc cgccgacgac
      961 gatcagatgc tcgggcagaa agtccacttc catcatcgtt gaattgttta ggtagctcac
     1021 ctgatcgagg ccgggcagcg gcggagtgga ggcgcggccg ccaacgttga tgaagaattt
     1081 acctgcctcg agtaggtcat cgccgacacg aatccgccgg gcgtcttcaa accgcgcatg
     1141 gccttcatag gccgtcaagt tctgagtgct cttcagccac ttctctaggc cttcgttgga
     1201 gcggcgcacc acagcgtctt tgcgttcttt gactttcttc atatcgacag tgatcgagct
     1261 gtcgattact acgccgtact cagaggcgcg tcgcgcgata tgagctgcac gagcgctcgc
     1321 gaccagcgtc ttggtcggga tgcagccagt attgacgcag gtgccgccga accgcttgcg
     1381 ttcgacgatc gccactttca ttcccgcgct tgccaaccga accgcgagtg atggccctgc
     1441 ctgcccagtg ccaataatga tcgcatcata cgtagttgcc attagccgat cctctttaaa
     1501 gtttcagcac acacttgatt gcatgtcaca gaaagttcat cagtgcgtcg gtcgtttctt
     1561 ttggattttc ttcaagcacc caatgtccgg tgtctttaag tacaacaaca ctggcatctg
     1621 aagcgacaat tcttgtttgc tgtccaagaa gttcgccatt tgcctgctcg ccgccaatcg
     1681 cgagcgccgg catggacaat ttaatttgag agagctgcgc gaagtctttg gctgcttgac
     1741 cgaacgaagc aaaatacgcc caaccggcgc gcattcttcc cg
//
LOCUS       DASQSL010000033         2059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_335, whole genome shotgun sequence.
ACCESSION   DASQSL010000033 DASQSL010000000
VERSION     DASQSL010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_335"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..860
                     /locus_tag="VE844_00345"
     CDS             <1..860
                     /locus_tag="VE844_00345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005220233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HZB99860.1"
                     /translation="HFCPEAKIIHIDVDPSSISKNVPVNIPIVGGAGAVLRELLKAMK
                     EIGTKPDPFALEAWWQSIKQWQAIDCLRYDRKSETIKPQHVIEELYHATKGDAYITSD
                     VGQHQMWAAQFYTFDKPRRWINSGGLGTMGFGLPAAMGVQLAFPDQWVACVTGEASLV
                     MCIQELSTCLQYDLPIKIVNLNNRYMGMVRQWQEFFYDRRYSHSYMDALPDFVKLAEA
                     FGHVGMRIDKTKDVRAALEEALAMKDRLVLLDFITDQTENVYPMIAAGKGHHEMHLSP
                     HLSPERELA"
     gene            857..1354
                     /gene="ilvN"
                     /locus_tag="VE844_00350"
     CDS             857..1354
                     /gene="ilvN"
                     /locus_tag="VE844_00350"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011312502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990610 - acetolactate synthase regulator
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HZB99861.1"
                     /translation="MSERRVLSILLENEAGALCRVAGLFSARAYNIESLTVAPTEDPT
                     VSRMTLVTSGPNEVIEQITKQLNKLIDVIRLMDLNEHKHIERELMLIKVTATGIDRDE
                     IKRLVDVFRGRIIDVTNVTYVIELTGTGEKLDAFLAALDRKLILEVVRSGVSGIARGE
                     KSLHV"
     gene            1410..>2059
                     /gene="ilvC"
                     /locus_tag="VE844_00355"
     CDS             1410..>2059
                     /gene="ilvC"
                     /locus_tag="VE844_00355"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004269174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HZB99862.1"
                     /translation="MNIYYDKDADLSLIQGKRAAIIGYGSQGHAHANNLRDSGVEVVV
                     GLRPDSGTAAKVRAAGLSCKPVREAVSQADVVMVLAPDEHQAALYREQIVPAIKQGAV
                     LAFAHGFNIHFRQIEPREDLDVVMIAPKGPGHLVRSTYTQGGGVPCLIAIHQDASGQA
                     KELALSYACAIGGGRAGIIETSFREETETDLFGEQTVLCGGITALIQASFETLIEAG"
BASE COUNT          451 a          559 c          597 g          452 t
ORIGIN      
        1 cccatttttg tcctgaggcc aagatcatcc atatcgatgt cgatccttcc tcgatctcca
       61 agaatgtacc ggtaaacatt cccatcgttg gcggtgccgg cgccgttcta cgcgaactgc
      121 tcaaggccat gaaggagatc gggaccaaac cggatccgtt tgcgctagag gcctggtggc
      181 agagcatcaa gcaatggcaa gccatcgatt gcctccgtta tgatcgtaaa agcgagacca
      241 ttaaacccca acatgtgatc gaagagctct accatgcaac taagggtgat gcgtatatca
      301 cctcggatgt cggccaacat caaatgtggg ccgcgcagtt ttacacattc gataagcccc
      361 gccgctggat caattccggc gggcttggga ccatgggatt cggtctgccg gccgcgatgg
      421 gggtgcagct tgccttccct gaccaatggg tcgcctgcgt taccggcgag gcgagtctag
      481 tcatgtgtat ccaagagctg tccacctgtc tgcaatatga tctgcccatc aagatcgtca
      541 atctcaataa tcgctatatg ggcatggtcc gtcagtggca agagtttttc tatgatcgcc
      601 gttattcgca ttcttatatg gatgccctgc cagattttgt caaactcgcc gaggcctttg
      661 gtcatgtcgg tatgcgcatc gataagacca aggatgtgag agcggcctta gaggaggctt
      721 tggctatgaa ggatcggctc gtgctgttgg attttattac cgaccaaacc gagaatgtct
      781 atccgatgat agccgccggc aagggccacc atgagatgca tctgtcgccg catctctcgc
      841 cagagagaga actggcgtga gcgagcgccg cgtactctcg atcctgttgg agaacgaggc
      901 cggtgcattg tgccgggtcg caggcctgtt ctccgctcgc gcctataata tcgaatcgct
      961 gacggtggcg cccacggagg atcccacggt gtcacggatg acgcttgtga ccagcggccc
     1021 caatgaggtc atcgagcaga tcaccaagca attgaacaag ctcatcgatg tgatcaggct
     1081 catggatctc aatgagcata agcacatcga gcgtgagctc atgctgatca aggtcaccgc
     1141 gaccgggatt gatcgcgacg agatcaaacg cttggtggat gtctttcgcg ggcggatcat
     1201 cgatgtcacc aatgtcacct atgtgattga gctgaccgga accggtgaaa agctcgatgc
     1261 ctttctcgct gcactcgata ggaaactgat cttagaggtg gttcgctccg gggtctcggg
     1321 gatcgcccgc ggggagaagt ccctgcatgt ataaatcttc cataaaacca gccgaaccgg
     1381 ctttgtaaac tcaacgcaca gagaagacca tgaatattta ttacgacaaa gatgcggatc
     1441 tgtccctgat ccaaggcaag cgagccgcta tcatcggtta tggatcgcaa ggacatgccc
     1501 atgccaataa tctgcgggat tccggggttg aagtagtggt gggactacgc cccgattcgg
     1561 gcaccgccgc caaggtgagg gcggcggggt taagctgcaa gcctgtgcgt gaggccgtct
     1621 ctcaggccga tgtggtgatg gtcttggccc cggatgaaca tcaagcggcg ctttaccgtg
     1681 agcagatcgt gcccgctatc aaacaagggg cggtcttggc ctttgcgcat ggatttaata
     1741 tccatttccg tcagatcgaa ccgcgcgagg acctcgatgt cgtcatgatc gcgcccaagg
     1801 ggccgggcca tttggtccgt tctacctaca cccaaggggg cggggtgcca tgcctgatcg
     1861 ccatccacca agacgcctcc gggcaggcga aggaactcgc tctgtcctat gcctgcgcca
     1921 tcggcggtgg ccgggcgggg atcattgaga ccagcttccg ggaggagacc gagaccgatc
     1981 tgtttgggga acagacggtc ctgtgtggcg gcattaccgc gctgatccaa gccagctttg
     2041 aaaccttgat cgaggccgg
//
LOCUS       DASQSL010000034         1176 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_14104, whole genome shotgun sequence.
ACCESSION   DASQSL010000034 DASQSL010000000
VERSION     DASQSL010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1176
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14104"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..399
                     /locus_tag="VE844_00360"
     CDS             <1..399
                     /locus_tag="VE844_00360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007293420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99863.1"
                     /translation="KVLHFSWITDFELSDDNLCAIMRGGRARWKIENETFNTLKNQDY
                     HLEHKYGHGKQHLATNFGLLMRLAFLLDQVQELWCATFQAARKARGSRTSLWQRMRSL
                     FTGYYIESWRQFFEALIHGPTSYPLQPDTS"
     gene            703..>1176
                     /locus_tag="VE844_00365"
     CDS             703..>1176
                     /locus_tag="VE844_00365"
                     /inference="COORDINATES: protein motif:HMM:NF025585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4331 family protein"
                     /protein_id="HZB99864.1"
                     /translation="MPNGASFTALTTVSDLSGTSPTPVITTDPATGVMFFAGEIDDPF
                     FFDIPGFNRFIASVLAGSADPTQLQRGRDTFAGYNTLGIALSLPVSLFGPVANNEIGI
                     HARTARLDTRRQVDREGIPAVNVALVPFPQKDAYNRASTEDDANGVFAGGIVGTLQ"
BASE COUNT          252 a          332 c          320 g          272 t
ORIGIN      
        1 aaggtcctgc atttcagctg gatcaccgat ttcgagttat cggatgacaa tctctgtgcg
       61 attatgagag gaggtcgagc acgctggaag atcgagaatg aaaccttcaa cacgctcaag
      121 aaccaggatt accacttaga acataagtac gggcacggta agcagcactt ggctaccaat
      181 tttgggttgc tcatgaggct ggcttttctg ctcgaccagg tccaggaact ctggtgtgcg
      241 acctttcaag cggcccgtaa agcacgaggt tcgaggacct cgctttggca acggatgcga
      301 agcctgttta caggctatta tatcgaaagc tggagacagt ttttcgaggc cttaatccat
      361 gggcctacgt cttacccgtt gcaacccgat acctcctagc taatggtttt tggcccggtg
      421 gttcgttagc gtgtttttga ggactccaac acctttaaat catcaacgga tactcggcct
      481 cctaccagag gccgcacatt ttatgctgcc ctttagtttt gagagtgaaa atcggactgt
      541 tagaggaatc ttatctatgg gaggccggga attgctgacc accagctgag ttatggcttt
      601 aatttcgaga ccacgggcaa tgagacactc gatcagagga tccggatccg gttttcaagg
      661 aagcgcgacg ccggcagcaa cccgcagacg gcaaccatcc gcttgcccaa tggcgcgagt
      721 ttcacggctc tgaccacggt ctccgatctc tcgggcacct ccccaacgcc agtcattacc
      781 acggatcctg cgaccggggt catgttcttc gcgggtgaga tcgacgaccc gtttttcttc
      841 gatatccccg gttttaaccg cttcatcgct tcggtcttgg cagggagcgc cgaccccacc
      901 cagctccagc gtggccgtga cacctttgcg ggctacaata cgctaggtat cgcgctgagc
      961 ctgccggtct cattgttcgg cccggtggcg aacaacgaga ttggcatcca cgcccgtacg
     1021 gcccggcttg atacccggag gcaggtggat cgtgaaggga tcccggccgt caacgtcgcc
     1081 ctggtgccct tccctcaaaa ggatgcctat aaccgggcct ctacggaaga tgacgccaac
     1141 ggagtattcg cgggcggtat cgtcgggacc cttcag
//
LOCUS       DASQSL010000035         1069 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_110096, whole genome shotgun sequence.
ACCESSION   DASQSL010000035 DASQSL010000000
VERSION     DASQSL010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110096"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            202..>1069
                     /locus_tag="VE844_00370"
     rRNA            202..>1069
                     /locus_tag="VE844_00370"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          259 a          269 c          361 g          180 t
ORIGIN      
        1 aagcgcgagc ccgcaagggc gaagcgcgac gtggacagcc cgtcgagtgt cagcagtcag
       61 cgtcgcagcg atgcggcgaa ctgactacca acacaaagta agacaacaac gcagagctaa
      121 gtcatcgacg ctcgcgttaa acagttgtgt tgttcgtgtc ctccctggct acggtcatgg
      181 ggtgcgggca gccgacgaat ttaacatgag agtttgatcc tggctcagaa tcaacgctgg
      241 cggcgtgcct aacacatgca agtcgaacgc gaaaggggag caatccctga gtagagtggc
      301 aaacgggtga gtaacacgtg ggtgacctgc cttcgagtgg gggataacgt cccgaaaggg
      361 acgctaatac cgcatgacat cctgcctttg gagaggcgga gatcaaagcc ggggatcgca
      421 agacctggcg cttgaagagg ggcccgcgcc tgattagcta gttggtgagg taatggctca
      481 ccaaggcgac gatcagaatc cggcctgaga gggcggacgg acacactggg actgagacac
      541 ggcccagact cctacgggag gcagcagtgg ggaattgttc gcaatgggcg caagcctgac
      601 gacgcaacgc cgcgtggagg acgaagatct tcgggtcgta aactcctgtc gagcgggaag
      661 aacaccttcc tggtgaacaa ccgggagggc tgacggtacc gctaaaggaa gccccggcta
      721 actccgtgcc agcagccgcg gtaatacggg gggggcaagc gttgttcgga attactgggc
      781 gtaaagggct cgtaggcggc caactaagtc agacgtgaaa tcccccggct caacctggga
      841 actgcgtctg atactggttg gcttgaatcc gggagaggga tgcagaattc caggtgtagc
      901 ggtgaaatgc gtagatatct ggaggaacac cggtggcgaa ggcggcatcc tggaccggca
      961 ttgacgctga ggagcgaaag ccaggggagc aaacgggatt agataccccg gtagtcctgg
     1021 ccctaaacga tgaatgcttg gtgtggcggg tatcgatccc tgccgtgcc
//
LOCUS       DASQSL010000036         1298 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_55254, whole genome shotgun sequence.
ACCESSION   DASQSL010000036 DASQSL010000000
VERSION     DASQSL010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1298
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55254"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..423
                     /locus_tag="VE844_00375"
     CDS             <1..423
                     /locus_tag="VE844_00375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004999658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZB99865.1"
                     /translation="GRFRSCLVQSDDYVLACYRYIELNPVRAEMVRHPREYRWSSYRA
                     NAEGKVDEGVSPHEEYRRLGRDPRDRREAYRVLFKVPLDEALVQQIREATNGNYALGN
                     QRFQAEIERALGRRATRGKAGRRPKAQAEPHSKQPGLL"
     gene            428..1216
                     /locus_tag="VE844_00380"
     CDS             428..1216
                     /locus_tag="VE844_00380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013705052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HZB99866.1"
                     /translation="MACPLLPYLLLGVVGGLLAGLFGLGGGIVIVPALFFLYRWQGFP
                     NDLIMHMAVGSSLATVAFTSVISTYAHHRHSAVLWPCTLRLIPGIIAGAWLGAAIADR
                     LPEHALRIGFGFFELLVAAQLALGFKPSAQRLVPGRLGMVVTGLIIGAMSAVLGIGGG
                     TLTVPFLLWCNIDMRHAVATSAACGLPIALVGSIGFATIGWGDAALPPGSSGYVYWPA
                     VIGVVAASTLFAPIGAWLTHTLPVATLRRLFAIVVALVGIRMLA"
BASE COUNT          220 a          350 c          421 g          307 t
ORIGIN      
        1 gggcgcttcc gttcgtgtct ggtgcaatcg gacgactatg tgctcgcgtg ttaccgctac
       61 atcgagctga acccggtgcg tgcggagatg gtgagacatc cgcgggagta tcgttggagt
      121 agctatcggg ccaatgccga gggcaaggtg gatgagggcg taagccccca tgaggagtat
      181 aggcgcctag ggcgggaccc gcgggaccga cgcgaggcgt atcgggtact gttcaaagtg
      241 cctctggacg aagcgttagt gcagcagatc cgcgaggcga ccaacggtaa ctatgccctg
      301 ggcaaccaac ggtttcaggc ggagatcgag cgggcgctag gcaggcgtgc tacgaggggc
      361 aaggcgggcc gccggccgaa ggcccaagcg gagccccaca gcaagcagcc tggcctgcta
      421 taatatcgtg gcctgtcccc tattacctta tttattgctt ggcgtagtcg ggggattgct
      481 cgcagggctg tttggcctcg ggggagggat tgtcattgtt ccagcgttat tctttcttta
      541 tcgctggcaa ggttttccga acgatctgat catgcatatg gcggtcggca gctcactcgc
      601 tacggtagct tttacttcgg ttatatcgac ctatgcccat catcgccaca gcgcagtgct
      661 ctggccttgc accctgcgct tgatcccggg tatcatcgcc ggggcctggc tgggtgcggc
      721 catcgccgat cgattgccag agcatgcctt gcgtattggg tttggtttct tcgagttgtt
      781 ggtagcggct cagttagccc ttggctttaa gccatcagcg cagcgtttag tgcctgggag
      841 gcttgggatg gtagtgaccg ggcttatcat cggagcgatg tcagctgtgc tcggtattgg
      901 cggcggcacc ttgactgtgc ctttcctgct ttggtgtaac atcgatatgc gccacgcagt
      961 cgctacttca gctgcctgtg gcctgccaat cgcattagtg ggttccattg gctttgccac
     1021 gatcggctgg ggagatgccg ccttgccgcc cgggagcagc gggtatgtat attggcctgc
     1081 ggtgatcggt gtggtagcgg caagcacctt gttcgcaccg attggcgcct ggctcaccca
     1141 tactttaccg gtagctacct tgagacgcct gtttgcgatc gtcgtggcgc tcgtgggtat
     1201 acggatgttg gcttaggatg taaattaaag cctcatcgcg caaggggcgc gccatcaaag
     1261 cgcgcccact ccacgcgctc gttaggcaaa gcccctag
//
LOCUS       DASQSL010000037         1054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_340, whole genome shotgun sequence.
ACCESSION   DASQSL010000037 DASQSL010000000
VERSION     DASQSL010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_340"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..237
                     /locus_tag="VE844_00385"
     CDS             <1..237
                     /locus_tag="VE844_00385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99867.1"
                     /translation="TLKGMVNKVGGLRPRVLHNHFASLGAPDVVFEQDAPDLETLEAQ
                     IKQVTDGAEFQRWTERMSGMLAQSPKREVYLVVE"
     gene            688..>1054
                     /locus_tag="VE844_00390"
     CDS             688..>1054
                     /locus_tag="VE844_00390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99868.1"
                     /translation="MKTVVGIFTARSAAESAVERLRTLGITNDQINLLIPGLPTAQLD
                     SVPTTDAEQPGMGPVVGGVVGGVTGASHGLLGAAVASALVPGIGPVMAIGLAAAAILG
                     VGGAVAGAAVGSALENTLSE"
BASE COUNT          229 a          281 c          336 g          208 t
ORIGIN      
        1 acactaaagg gtatggtcaa caaggtcggc ggcttgcggc cgcgcgtatt gcataatcac
       61 tttgcatctc tcggggctcc ggatgtggtc ttcgaacaag atgctcccga tctggagacg
      121 ctcgaagccc agattaaaca agtcaccgac ggcgcagagt ttcagcggtg gaccgagcgt
      181 atgtcaggaa tgctcgcgca gtcgcctaaa cgtgaggtgt acctagtcgt ggagtaacga
      241 gccggtgaag cattctacgc tcgcctgacg cgacccaaag gattgaaaaa acctcgccag
      301 agatcatgcc ctgaacacgc cgggctctca ggatgagagc ccatctcatc ttgagagccc
      361 aagatcgccc agtcctacta cccttccgta aggctttgtt caacgtgtca gaaatggtct
      421 tgggggtgga ggcgcgatga cctggcggtt gccccgtacc gccgagggag gctgcgccat
      481 cggcggtgtg caaagagagg atgatgatca gtgattatca gttatggcat agaagttgcg
      541 gaaactatga cggcattgcc ggctagcctc tgtcatatgc tttattgcgg ccgagggcat
      601 aggaaagccg aagcttcgta cgtcagactc ccttagggcc tacggagcga ccacgatcga
      661 aggaggccag accaaggagg cgagatcatg aaaactgtgg tcggtatttt caccgcacga
      721 tctgctgcag agagtgccgt tgaacggcta cggacgctgg ggatcacaaa cgatcagatt
      781 aacctcttga ttccagggct tcccacagcg cagctcgaca gcgtccccac taccgatgcg
      841 gaacagcccg gcatggggcc ggtggtgggt ggcgtggttg gcggagtgac gggggcttcc
      901 cacggactgt taggggcggc ggtcgccagc gcacttgtgc caggaattgg tccggtcatg
      961 gccattggcc tagccgctgc cgccatttta ggggtagggg gagccgttgc cggagccgca
     1021 gttggcagcg cactggaaaa taccctctcg gagg
//
LOCUS       DASQSL010000038         1458 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_82624, whole genome shotgun sequence.
ACCESSION   DASQSL010000038 DASQSL010000000
VERSION     DASQSL010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1458
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82624"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1458
                     /locus_tag="VE844_00395"
     CDS             <1..>1458
                     /locus_tag="VE844_00395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012407620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Tn3 family transposase"
                     /protein_id="HZB99869.1"
                     /translation="HVYTILRASYSGHYRRMLPPLLDALDFRANTATHRPIITALALI
                     KANRDSSKQHFPVDGTVPIDGVVPAHWRELVLEQDPNGEIRVNRINYEISMLHSLREG
                     LRCKAIWVAGADRFRNPDDDLPADFDVQRTTYYAALQQPESADDFITGVRTAMEDALS
                     RFNAGLPKNPKVTLHVQGKNRIKLSPLDPQPEPATLLRMKAELMRRWPMTSLLDVFKE
                     TDLRVGFSHAFQSVASREVLDRSMLQPRLLRCLYGLGTNAGLKRVVAGDPSVHYHDLL
                     YIRQRYLHKDALREAISRVANATFAIRRPEIWGEGTTSCASDAKKFGAWDQNLMTEWH
                     IRYGGRGVMIYWHVEKKSVCIYSQLKRCSSSEVAAMIEGVLRHCTEMEVEQQYVDSHG
                     QSEVAFAFSSLLGFDLMPRLKAIASQKLSRPTPSNVDAYPNLQPILTQPINWGLIRQH
                     YDEMIKYATALRLGTAEPESILRRFTRHHVQHPTY"
BASE COUNT          312 a          432 c          399 g          315 t
ORIGIN      
        1 gtcatgtcta tacgatttta cgcgcgtcgt atagtgggca ttaccggcgg atgctcccac
       61 cattgcttga tgctctcgat ttccgagcca atacggcgac gcatcgtccc atcatcacag
      121 cgttggcctt aatcaaggcc aaccgtgaca gtagtaaaca gcactttccc gtggatggca
      181 cggtccccat tgacggggtc gttcctgcgc attggcggga actcgtcctg gagcaagacc
      241 cgaatggcga gatacgggtg aaccggatta actacgagat cagtatgctc cattctctgc
      301 gcgaaggtct gcgctgtaaa gccatttggg tggcgggagc ggatcggttt cgcaatcccg
      361 atgatgatct gcccgccgat tttgacgtgc agcggacgac gtattatgcg gcgctccagc
      421 agccggaaag tgccgacgac ttcatcactg gcgtgcgcac agccatggaa gatgctctct
      481 cccgtttcaa tgctggactc ccgaagaatc caaaagtcac cctgcacgtc cagggaaaaa
      541 accggatcaa actctcaccc ctggatccgc agcctgaacc agccactctt ctccgcatga
      601 aagctgagct catgcgccgg tggccgatga cgagtttgct ggatgttttc aaagaaaccg
      661 atctccgggt tggcttcagt cacgccttcc agagtgtggc gtcacgggaa gtgctcgacc
      721 gcagcatgtt gcaaccgcgg ttgctccggt gtctgtatgg gttggggacc aatgccggtc
      781 ttaaacgtgt ggtcgccggt gacccgtctg tgcattatca cgacctactc tacattcgac
      841 agcgctatct gcacaaagat gcgttgcgcg aagccatcag ccgcgtcgcc aacgccacct
      901 ttgcgatccg acgcccggag atttggggag agggcactac atcctgtgcc tcggatgcca
      961 aaaagttcgg cgcgtgggat cagaatctca tgaccgaatg gcacatccgc tacgggggta
     1021 gaggggtgat gatctactgg catgtggaga aaaaatcggt ctgtatctac tcccaactca
     1081 agcgctgctc ctcctctgag gtcgccgcca tgattgaggg ggtcctacgg cattgcaccg
     1141 agatggaggt cgaacagcaa tacgtcgata gccatgggca aagtgaggtg gccttcgcgt
     1201 ttagctctct gttgggtttt gacctcatgc cgcgcctcaa ggctatcgct tcacaaaagc
     1261 tttcgagacc cactcccagt aatgtcgatg cttaccccaa cctgcaaccg attctgacgc
     1321 aacccatcaa ctgggggctg atccgccagc actatgacga gatgatcaag tacgccaccg
     1381 ccctgcgctt aggcaccgcg gagccggagt cgatcctgcg tcgcttcacc cgccaccatg
     1441 tgcagcatcc cacctacc
//
LOCUS       DASQSL010000039         1993 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_360, whole genome shotgun sequence.
ACCESSION   DASQSL010000039 DASQSL010000000
VERSION     DASQSL010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1993)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1993)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1993
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_360"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            314..1665
                     /locus_tag="VE844_00400"
                     /pseudo
     CDS             314..1665
                     /locus_tag="VE844_00400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011735389.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1182 family transposase"
BASE COUNT          488 a          481 c          605 g          419 t
ORIGIN      
        1 gttcgctatt gcgatgatat tatcatcgga tgtgaactgg aggaggatgc ccgacgagtc
       61 gtggaggtac tgcccaaacg gctagagaaa tatggcctag gagtatgtcg gacttgctta
      121 ggcaagcggt aatatatagg catgagttga atggcacttc ctggaggagg gtcaaacaaa
      181 ggtaataaat tgactttaaa ggatttttta tgaaatccac cttttcgcga aaaccccttt
      241 aaaaacaatg agctaacccg tttcaggaag tgccattcag gcatgagttg gttttcatac
      301 cggaacagtg attatggcgt caccctttat cccaatagat aggaattgcc caattgaact
      361 gccggcctca ttggaaggct ggttaaggga agatcatttg gcccggtttg ttgtggatgt
      421 agtcgagcag ttggatttaa gtgcgataga gcaagcctat agtggccgtg gttcgccggc
      481 gtatccgcca aagccgatgg tggcgttgct attttacggt tatgccacgg gggtgttttc
      541 cagtcgcaaa ctggagcagg cgacctatga agcggtgtca ttcatttata ttgcgggcgg
      601 tctgcacccg gatcacgaca gcattaacag tgtccgcaag cggtttgtgg cgcaggtgga
      661 agagctgttt gtgcagatct tactgattgc acaccatttg ggtgtgctga aattgggtga
      721 tatttttatt gatgggagca aggtgaaagc caatgcaagc aagcacaagg cgatgagagt
      781 agggcgtatg ccaacaagct ggaggcccac cttaaagccg aggtggaaaa gctgctagag
      841 ctggccgaga ccgcccatga tcaaggaaac aggggacgga atatcccggc tgagattgcc
      901 cgacgggaag agcgcctgaa gaagatcgcc gaggctaaag cggagatcga aaggcgtgca
      961 caggaatgtc atgcgcggga aaaggctgaa tacgacgaga agatggcccg gcgggcggcg
     1021 caagagaagc agaccgggaa gaagccgggt ggacgcgcgc cgaaagtgtc cacgcctggt
     1081 ccgcaagcca aagatcaggt caacttcacc gatgaagaat cgcgcatcat gccggtatcg
     1141 ggcggcggct ttgaacaagc ttataacggc cagattggcg tggatgggga tagccgcctg
     1201 attgcgtgtc agcacgtcag ccagcagccc aacgacaaac aagcgctggt tccggctctc
     1261 gaccaactcg cccaattgcc cgaagagctc ggcaaagtca aaaccgcctc cgccgatacg
     1321 ggctactaca gtgaagacaa tgtggtcgct tgtgcaaaag ccgatgtggt tccgtatatt
     1381 gcctgtgggc gtgagccgca ttatccaccg ctcgcagaac gcctggccgg tgccccgcag
     1441 gcacccgaga accccgaccc ggtgagtgtc atgcgccacc gcctgaagac ggctgaaggc
     1501 aaggcgcatt atgccaaacg caaatccact gtcgagccgg ttttcgggat tatcaaacac
     1561 gtgatcgggt ttcggcactt catgttacgt ggtttgaagg cagtccaggg cgagtggacg
     1621 ctcgtctgca ttgccttcaa tctgaagcgc ttgcataccc taaaaggggt gaaaaaggct
     1681 gccgaagtgg cagcgagtat gttgttgagt gtgcttaggc ttgcaaggca gtgcttatac
     1741 cctaccacac ggctctcttg gcctgggagg gaagcacggg ccgtgtgaaa gtccgacaga
     1801 ctcctaggat gaaatgtcgc gtgacctgta ggacgcccgc gagctacgga tagccgtcgc
     1861 gccatccatg cgatagcaga taaggatact ggcatgcgtg taacttttcc aagcttcgac
     1921 gcctgcgttc cgaccgacgc gcggcgcggc gctcgcgata gcgtaataac cgggcgcgga
     1981 tatcttttct cgc
//
LOCUS       DASQSL010000040         1273 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_14134, whole genome shotgun sequence.
ACCESSION   DASQSL010000040 DASQSL010000000
VERSION     DASQSL010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1273
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14134"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..252)
                     /locus_tag="VE844_00405"
     CDS             complement(<1..252)
                     /locus_tag="VE844_00405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99870.1"
                     /translation="MRSDMRECAIGKAVNEVLEAKGLDPETATATLADMQAALDKGGA
                     ECPTANLLESPISSNNLDFGRNANAYLNCLRPQSFVCDPS"
     gene            complement(210..>1273)
                     /locus_tag="VE844_00410"
     CDS             complement(210..>1273)
                     /locus_tag="VE844_00410"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZB99871.1"
                     /translation="PSKDNMVDPLTWQSGDDQRIVPTTATESWQQVDADTWRFELRQG
                     VKFHNGEAWNAQAALPSLAYQGIADNDNSSFSYTAGYKGEAVGEYTVNINCDQACPIF
                     PETAFLLNFSAPEYFKNTSEEEFGQKTVGFGPYKQVSWEPGISVTQEAYADYVPAGNH
                     FEFQKPYIQNVKWVWRGETTVLAAMVQTGEVDIAFDVGVDVIDSLKPEQVKSGSSAEV
                     FAFWINTLWHPELKKVKVRQAMAHAINCQEIVDSLYRGLPTCRGNIIWPGVLGATERN
                     TAPYEYNPELSRQLLREAQYDPKNVIKITGRATRIPSRWRSTRPWTATSMRWASTPKS
                     MSWSRQCAATCASAPSARR"
BASE COUNT          239 a          365 c          379 g          290 t
ORIGIN      
        1 gctggggtca cagacgaagg actggggccg gaggcagttg agataggcgt tggcgttacg
       61 gccaaagtcc agattgttac tggagatggg gctttccaaa aggttagccg tggggcactc
      121 agcgccgcct ttatccagag cagcttgcat atcggccagg gtggcggtgg ccgtctcagg
      181 gtctaatccc ttagcctcca gcacttcatt caccgccttg ccgatggcgc actcgcgcat
      241 gtcgctgcgc actgacggct ccacgacatt gatttcggcg ttgatgccca cctcatcgag
      301 gtagctgtcc atggcctcgt agacctccac ctgctgggga tgcgagtggc gcgaccagtg
      361 atcttgatga cattcttagg gtcgtactgg gcttcccgca atagctgtcg ggacaattcc
      421 gggttgtact catagggggc ggtattgcgc tcggtagcgc cgaggactcc aggccagatg
      481 atgttgcccc gacaggttgg cagccctctg tagaggctgt ccacaatctc ctggcagttg
      541 atggcatggg ccatggcttg gcgcaccttg accttcttca gctctgggtg ccacagggta
      601 ttgatccaga aggcaaacac ctctgccgag ctgcccgatt tgacctgctc gggcttaagc
      661 gaatcgatga cgtctacccc gacgtcaaag gcgatatcca cctcgccggt ctgcaccatc
      721 gccgctagga cggtagtctc gccccgccag acccatttga cgttctggat atagggcttc
      781 tgaaactcga agtggttacc cgctgggaca tagtcagcat aggcttcttg agttacggag
      841 atcccaggct cccaactcac ctgcttgtac ggcccgaaac ccaccgtctt ctggccgaac
      901 tcttcctcgg atgtattttt gaagtattct ggagcactga agttcaagag gaaagcggtt
      961 tcgggaaaga tggggcaggc ctggtcgcag ttgatgttca cggtatactc ccctactgcc
     1021 tcacccttgt aaccagcggt gtaagagaag ctggagttgt cgttgtcggc gatgccctgg
     1081 tacgccaggg agggcaaagc tgcctgggca ttccaggcct caccattgtg gaacttgacg
     1141 ccctgacgca actcgaagcg ccaggtatcc gcatccacct gctgccagct ctcggtggcg
     1201 gtggtcggga cgatgcgctg gtcatcccct gattgccagg tcaggggatc taccatgttg
     1261 tccttgctcg gag
//
LOCUS       DASQSL010000041         2851 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_368, whole genome shotgun sequence.
ACCESSION   DASQSL010000041 DASQSL010000000
VERSION     DASQSL010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2851
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_368"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..112)
                     /locus_tag="VE844_00415"
                     /pseudo
     CDS             complement(1..112)
                     /locus_tag="VE844_00415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011111123.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            139..429
                     /locus_tag="VE844_00420"
     CDS             139..429
                     /locus_tag="VE844_00420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99872.1"
                     /translation="MGKQQLVNLVMFHGYRVAQAAALIKHHRAEVDRAYQGRGRQVGF
                     SSQLLKCCKPSQPIPQFAGMDRVDGVLCFNKSRIEYNVFINLLKTHVEQQAL"
     gene            454..2670
                     /locus_tag="VE844_00425"
     CDS             454..2670
                     /locus_tag="VE844_00425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011735751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RecD-like DNA helicase"
                     /protein_id="HZB99873.1"
                     /translation="MMHPIKKGSLETPTERLSGSVERVTFYSEESGYCVLRVKVRGQR
                     DLVTVVGTVASVAPGEYIECQGWWVNDHQYGRQFKTTHLKVVPPSTLEGIEKYLSSGL
                     IRGIGPHFARKLVAGFGEAVFEVIEQAPERLLKLEGIGPKRQERVVQAWAEQKVVRAI
                     MVFLQSHGVGTARAVRIYKTYGDEAIDRVRENPYQLGIDIHGIGFKTADTLAQRLGIP
                     SDSPMRAQAGVRHVLQELAAEGECAAERERLIGAAGQLLGIPRPVIDQAIERELEQEN
                     LVAERIGGQSSVFLTPLHRAETGVANHLLRLARGVPPWGPIDPGKALPWVEQKTGLIL
                     STSQREAVARAINSKVTVITGGPGVGKTTGVNSILRILAAKGVKMLLCAPTGRAAKRL
                     SESTGIPAKTIHRLLEFDPKVFDFKRGSHAPLEADLVVVDELSMVDVVLMNQLLRAIP
                     QSAALLMVGDVDQLPSVGPGAVLSDIIESGTLLTVKLTEIFRQAERSQIVINAHRINQ
                     GKLPRLPEAQEDPSDFYFIPTDTPEDIHARLVHVVTERIPKRFELHPIEDIQVLTPMN
                     RGRLGARALNSELQARLNPQAQPRLSRFGWTFAPGDKVIQTVNDYHKEVFNGDIGRVA
                     RIDIEEGVIYMDFDGRTVEYEFGELDEVALAYAATIHKSQGSEYPAVVIPLATEHYPL
                     LQRNLLYTGVTRGKQLVVIIGQSKALAMAVKNVRSARRITNLAARLRGEARLDYAR"
BASE COUNT          595 a          808 c          876 g          572 t
ORIGIN      
        1 gcccttgctc cggggctttg agccactcga tcaaggctcc cagcacccgc tgcacctccc
       61 ctggcgtccg gctgttctcc agccgaaata gggctgctgc cagattccgc aacggcgcaa
      121 atcagccacg agttccgcgt gggaaaacaa cagcttgtaa atctggtcat gttccatggc
      181 tacagggtag cccaagcggc tgccttgatt aagcatcatc gagccgaagt ggatcgagcc
      241 tatcaagggc ggggccgcca agtgggtttc tcatcgcaac tgctgaagtg ttgcaagccg
      301 agccagccga tcccccagtt tgctggaatg gatcgtgtag atggtgtgct atgctttaat
      361 aagagccgga tagaatataa tgtttttatt aacttgctta agacgcacgt ggaacagcag
      421 gcgctttgat cgtgctcctc acacaacgcc gctatgatgc accctatcaa aaagggatca
      481 ctggagacac cgactgagcg cctgtcggga tcggtggaac gcgtcacctt ctacagcgaa
      541 gagagcggtt attgtgtgct ccgggtcaag gtgcgtggac agcgggattt ggtaaccgtg
      601 gtcggcaccg tcgccagcgt ggcccctgga gaatatatag aatgtcaggg ttggtgggtc
      661 aacgatcatc agtatgggcg acagtttaag accacccacc tcaaagtggt gccaccgagc
      721 accctcgaag ggatcgagaa gtatctgagc tcgggcctca tccgtggcat cggcccccac
      781 tttgcccgca agctggtagc gggttttggc gaagcggtct tcgaggtcat cgagcaggcc
      841 cccgaacggc tcttgaaact ggagggtatc gggcccaagc gccaggaacg ggtggtccag
      901 gcctgggctg aacagaaggt agtgcgggcg atcatggtgt ttttgcaatc ccatggcgtg
      961 ggcacagcac gtgcggtgcg gatctataag acctatgggg atgaagcgat tgatcgggtc
     1021 cgcgagaatc cctatcaact cgggattgat attcacggta ttgggtttaa gaccgccgat
     1081 acgctggccc agcgtcttgg gatcccgagc gactccccga tgcgcgccca agcgggcgtg
     1141 cgccatgtgc tgcaggaact cgcagcggag ggcgagtgcg cggcggaacg cgagcgcctg
     1201 atcggtgccg ctggacagct cttggggatc ccaaggccgg tcattgacca ggccatcgag
     1261 cgcgagctcg agcaagagaa tctggtagcc gagcgcatag gcggccaatc gagtgtattt
     1321 ttaactcccc tgcaccgggc tgagaccggg gtggcgaatc atctcttgcg actcgcgcga
     1381 ggtgtcccgc cctggggccc gatcgatccc ggcaaggcgc tcccttgggt cgagcaaaag
     1441 accgggctga tcctatccac ctcccagcgg gaggccgtgg cccgggcgat taacagtaaa
     1501 gtcacggtga tcaccggagg accgggggtg ggtaagacca ccggggtcaa tagtatcctg
     1561 cggatcctgg ctgccaaggg ggtcaagatg cttctctgcg cgcccacggg ccgggccgcg
     1621 aaacggctgt cggagtccac cgggatcccg gccaagacca tccaccggct gctggagttc
     1681 gatcccaagg tgtttgactt taagcgcggc agccacgcgc cgcttgaggc cgatctggtg
     1741 gtggttgatg agctctccat ggtcgatgtg gtgctcatga atcaactgct tcgagccatt
     1801 ccgcagtcag cggcgttatt gatggtcggg gatgtggatc agctcccttc ggtgggaccc
     1861 ggcgcggtgc tctccgatat catcgagtca ggcaccctcc ttaccgtgaa gcttaccgag
     1921 atcttccggc aggcggagcg ttcccagatc gtgatcaatg cccatcgcat caaccaaggc
     1981 aaattgcccc gactgcccga ggcgcaggag gaccccagcg acttttactt tatccctacc
     2041 gacacccccg aggacatcca cgcgcggctc gtgcacgtcg tcaccgagcg tatacctaaa
     2101 cgctttgagc tgcatccgat cgaggatatc caggtgctta ccccgatgaa ccgcggccgg
     2161 ctcggcgccc gcgccctaaa cagcgagctc caagcccgcc tcaatcccca ggctcaaccg
     2221 cgtctgagcc gcttcggctg gaccttcgcc cccggcgata aagtgatcca aaccgtcaac
     2281 gactaccaca aagaggtctt caatggcgac atcggtcgag tggcccgtat cgatatagaa
     2341 gagggagtga tttatatgga ttttgacggg cgtacggtag agtacgaatt cggcgaattg
     2401 gacgaggttg cgctcgccta tgccgccacc atacataaga gtcaaggctc cgagtacccc
     2461 gcggtggtga tccccttggc taccgagcat tatcccttgc tgcagcgcaa tctgctctat
     2521 accggtgtga cgcggggcaa gcagttggta gtcatcatcg gtcagtccaa ggccttggcg
     2581 atggcggtga aaaacgtgcg ctcggcacgc cgtataacca atctcgcagc gcggttgagg
     2641 ggagaggctc ggctggatta cgcgcggtag gtaatgttat tccctccccc tcaatgggat
     2701 taagtactta acgtgagttc gatataagaa ttacagcccg actgttggga gagcggggtg
     2761 gagtctgatg gagagacggt tttttctcgc ggaaggtata agccaccaac ccggcgatca
     2821 tattgacaaa gaagttgaat gggctgcgat g
//
LOCUS       DASQSL010000042         1289 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_82643, whole genome shotgun sequence.
ACCESSION   DASQSL010000042 DASQSL010000000
VERSION     DASQSL010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1289
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82643"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..276
                     /locus_tag="VE844_00430"
     CDS             <1..276
                     /locus_tag="VE844_00430"
                     /inference="COORDINATES: protein motif:HMM:NF018257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfocyanin-like copper-binding protein"
                     /protein_id="HZB99874.1"
                     /translation="TVPIGKMVFSVTNAGTMEHNFEVEGKGLEKKLEMNLKPGETGNL
                     QVDLPAGTYTVYCPVDDHKKRGMQLELIVAQQQSHGERPSIISRVSP"
     gene            516..>1289
                     /locus_tag="VE844_00435"
     CDS             516..>1289
                     /locus_tag="VE844_00435"
                     /inference="COORDINATES: protein motif:HMM:NF037429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99875.1"
                     /translation="MEITKELQQLAQFSDPMFPVISVYLRTQWSDQAQRAESTAFLDR
                     HLRQASALEVKTDAARQSLERDLARIAQWATQLGSHADYAASVSVALFGCAGADLWVE
                     FPSPILFENEFSVADRPALRQLARLDADYTNALVVQIDAQTARVCEVVLGGVRTDTSF
                     SRDDTALPNSEGQLRYRRQVQPEAYRHYEEVAAYVTDYCSERPETYVILSGKDEILAP
                     FRQLLPPHVQHRIIDTVSLDRQATHERILRVARRVLERHE"
BASE COUNT          281 a          384 c          379 g          245 t
ORIGIN      
        1 accgtgccta tcggcaagat ggtattcagc gtgacgaacg ccggcaccat ggaacataac
       61 ttcgaggtcg aaggcaaggg gctcgagaag aagctcgaga tgaaccttaa acccggggaa
      121 accgggaatc ttcaggttga tcttccggcc gggacgtata ccgtctattg cccggtcgat
      181 gatcacaaaa aacgtggcat gcagctggag ctcatagtgg ctcagcagca atctcacggg
      241 gagaggccgt cgataatttc ccgcgtatcg ccctaagtat tcattacatg tgcgtatgcg
      301 ggcgaggatt tttagaacct tgcacaacgt aaagccgagc aacgggaacc ccgttcggcg
      361 cctaacgaca agctcgtgga cgttctcaag acgttctcaa gatgataacg tgcaggccgt
      421 ctcacccttg atcgggaagc gtcagcgcca tcacccccac ctaagggcga gcagccgagg
      481 ctcggcgatg gccgtcttgc atgaccggag tcgttatgga aatcacgaag gaactccagc
      541 aactcgcgca attttcggat cccatgtttc ccgtgatcag tgtctatctt aggacgcaat
      601 ggtctgatca agcccagcgc gccgagagca ccgccttctt ggatcgccac ctgcgccaag
      661 cctcggctct agaagtcaag accgacgctg cgcgccagag cctggagcgg gacctggcac
      721 gcattgccca atgggcaaca caactcggta gtcatgcgga ttacgccgcg agcgttagtg
      781 tggcgctttt cggctgcgcc ggcgcggacc tctgggtgga attcccgtct ccgatcctct
      841 ttgagaacga attcagcgtc gcggaccgcc cggccctgcg gcaattggcc cgcctcgatg
      901 ccgattacac caacgcgctg gtggtacaga ttgatgcgca gacagcgcgc gtctgcgagg
      961 ttgtgttggg gggggtgcgt acggatacct ccttcagccg ggatgacacc gcactcccga
     1021 actcggaggg acaactgcgc taccgacgtc aggtgcaacc cgaggcttac cgccactatg
     1081 aggaagtggc tgcgtacgtc acggactact gcagcgagcg accggagacg tatgtgatcc
     1141 tcagcggcaa agatgagatt ctggcgccgt tccggcagct cctgccgccg cacgtccagc
     1201 acaggatcat cgacaccgtc tctttggacc ggcaagccac ccatgagcgt attttgcgag
     1261 tcgcccgccg agtgctcgaa cgacatgaa
//
LOCUS       DASQSL010000043         1132 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_110122, whole genome shotgun sequence.
ACCESSION   DASQSL010000043 DASQSL010000000
VERSION     DASQSL010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110122"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(261..935)
                     /locus_tag="VE844_00440"
     CDS             complement(261..935)
                     /locus_tag="VE844_00440"
                     /inference="COORDINATES: protein motif:HMM:NF016764.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YIP1 family protein"
                     /protein_id="HZB99876.1"
                     /translation="MHTEQQNYGEAGGHPGENPRRVSTGSATAEFTYTNPVESFVGTV
                     RDLVTRPVDFFRGIARRGDFVNPLIFALVCAVISAAIGGFLGVLYATVGIWNTGGGGA
                     IGALVASMFFTPIISAIALFLCAGILHLLVTLVVKPANAGFEATFRVASYSNVAQLVG
                     WVPVLGPLVAAVASIILSVIGVREVHETTTGKAALVVLIPAAVGLLIALLLIALVAAV
                     LLFASQ"
BASE COUNT          259 a          346 c          306 g          221 t
ORIGIN      
        1 cgggtttctg ttctctggtt tgctgagtgt tgcaccgtat tgcgttcccg gtggtatcag
       61 attggtatca ggaggtgatg gattatcact cttccaacac acctgagtag tcgaatctag
      121 cagaggcacc gggacagacg ccaacgtcaa gatatcctcc cggttcggaa aaggcttcgg
      181 gtagccttct gaccgggagg atactgttta ccggtacagg gacaacctag cttggccaac
      241 ataccggcac ggatgcctta ctactgcgaa gcaaacaaca ggacagcagc tactagcgca
      301 ataaggagca acgctatcaa cagtcccacc gcagcgggaa tcagaaccac aagcgcagcc
      361 ttgccggtcg tcgtctcgtg aacttcccgc acaccgataa cagaaaggat tatggaagct
      421 acggcggcca ccagcggtcc cagtaccggg acccagccca cgagctgcgc gacgtttgag
      481 taggaagcta cccggaacgt ggcctcgaaa ccggcattag cgggcttgac gaccagggtg
      541 accagcaagt gcagaatgcc ggcgcataga aacaacgcta tcgcggagat gatcggcgta
      601 aagaacatag aggctactaa ggccccgatt gctcccccgc cgcccgtgtt ccatatgccc
      661 acggtggcgt acagtactcc tagaaaaccg cctattgccg ccgagatcac cgcgcacacc
      721 agggcgaaga tcaagggatt cacgaagtct ccccgccggg ctatgccgcg aaagaagtcc
      781 acaggccggg taaccagatc cctgaccgtg cccacgaagc tttctacggg attggtgtaa
      841 gtaaactccg ctgttgcgga gccggtggac acccttcttg ggttttcgcc aggatggcct
      901 cccgcctcgc cgtagttctg ttgctccgtg tgcatcacca actccttctc tacgctctcc
      961 aacctaagtg actagcttat tccgcggtcc gcgccctgcc atcggtccgg aggagtaaat
     1021 cgcgtggtcc cccggaacca atcgcgtcca atctacgagc gtagtctccg atcccacccc
     1081 ggtcttgtta gcgaactcca ggtgacagcc catgtaatag agtggccctt gc
//
LOCUS       DASQSL010000044         1628 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_41571, whole genome shotgun sequence.
ACCESSION   DASQSL010000044 DASQSL010000000
VERSION     DASQSL010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41571"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            223..1368
                     /locus_tag="VE844_00445"
     CDS             223..1368
                     /locus_tag="VE844_00445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99877.1"
                     /translation="MESFRKIFCRGEGFEHICRFITGLILSPNKTLQGIYDLQVWEGE
                     APSRRAMHEAVFESGWDGAAFIQGHRREVAHAYQGRGRQAISLDWTLAHHGRGPKIHA
                     VTKGYDYVERRTTLFQAVVRGVVSNREWVDGLGRVVQDPKDLKAEAEYLRATAKTEYT
                     QMAEVHRRLLELLHYRAHQLGYRKRTEIAVEIVRQLEAEGQFPQAPYAFDNAVLTLEL
                     TRLIESRGKHWVSELEVSRHIQWLGRWRRVEEVATELRGRHPESFRAVKVHCRNGEEK
                     VFFAFTKVVRLKRYGRKRLMIVHEREDLTDAPRFLLTEALHWESGRVIQTWRYRWASE
                     VFQEKGQAGVWIGIGSGTQGGSGHTPLPVELRGAVLGPTRACWSVEI"
BASE COUNT          383 a          373 c          537 g          335 t
ORIGIN      
        1 gtttccacct caacaaacaa gtgccaccgg gacgcctaat aggcgtgcac ctaaccacgg
       61 ttagcagcgc ctgacgccca ggcggccagg agcttaagag tcacgacttg gaaggttatg
      121 gggaaaaaca gacgaatggt agaagataag gggaggaata gaagaagaga gatggagccg
      181 tgctagcaat tactcgcgtg ccggaggttc ttggccccgg ggatggagag cttccggaag
      241 atcttttgtc gtggggaagg gtttgagcat atttgccggt ttattactgg cctgatcctc
      301 agccccaaca aaaccctcca agggatatac gacctccagg tgtgggaagg ggaagcgccc
      361 agccggcggg ccatgcatga agcggtattt gagtcaggct gggacggtgc ggcgtttatc
      421 caagggcatc ggcgggaagt ggcccacgcc tatcaagggc gaggccgcca agcgatctcg
      481 ttggattgga cactcgccca tcatgggcgt ggtcccaaga ttcacgcggt cacgaagggt
      541 tacgattacg ttgagcgacg gaccacgcta tttcaggcgg tggtgagggg ggtagtgtcc
      601 aatcgtgaat gggtcgatgg cttggggaga gtagtccaag atccgaagga tttgaaagcg
      661 gaggcggagt atttgagagc gacagccaaa accgagtata cgcagatggc agaggtacac
      721 cggcgtttat tggagttatt acattatcgt gcccatcagc tcgggtaccg caaacggaca
      781 gagatcgcgg tggagatcgt gcgtcaactg gaagctgaag gccaatttcc acaggctccc
      841 tatgccttcg ataacgcggt attgacgttg gaattaaccc gtttaattga aagccggggt
      901 aaacattggg tcagcgaatt agaagtctcg cggcacattc agtggctggg ccgctggcgg
      961 cgtgtggagg aggtggccac cgaactgcga ggacggcacc cggaaagttt ccgggcggtg
     1021 aaggtgcact gtcgcaatgg ggaggagaag gtattcttcg ctttcaccaa agtggtccgg
     1081 ctgaagcggt atggacgcaa gcgcttgatg atcgtacatg aacgggaaga cttgaccgat
     1141 gcgccccgtt ttttgctcac cgaggccttg cattgggaaa gcgggcgagt gattcagacc
     1201 tggcgttatc gttgggcttc ggaggtcttt caggagaagg gccaagcagg tgtgtggatt
     1261 ggaatcggct caggtacgca aggaggaagc ggtcacacgc cacttccggt tgagttgcgt
     1321 ggcgcagtcc ttggtccaac gcgcgcctgc tggagcgtcg aaatctgaaa ggtatgagtt
     1381 cgccgcagga aagaaaacct acggccagaa gtgccgagcg attggtcggg aagtactccg
     1441 ctctctgctg gagctgagca agcggtattt tgccgaaggg aaatcctgcg atgaagtgct
     1501 ggaggtgttg atgccagcct gatgagttca ggctttctta gtctgcaaaa ttactaacct
     1561 tccaagtcgt ggaaatggtg tattggagat ctctataccc aagcatgagc gggtccagcc
     1621 gcgcaaga
//
LOCUS       DASQSL010000045         1523 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_192545, whole genome shotgun sequence.
ACCESSION   DASQSL010000045 DASQSL010000000
VERSION     DASQSL010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192545"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(246..1397)
                     /locus_tag="VE844_00450"
     CDS             complement(246..1397)
                     /locus_tag="VE844_00450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99878.1"
                     /translation="MLIKGFDSRQMEAYLAENVVARVFIGRHREVHAQIWDHSNIARA
                     YAALGKAGIDAVNRLVIQEAHRFGFVDEGSLSADTTAQELPMGYPNEPGILRGLAQRC
                     GRALTQLQKRGVQGLDGALDQVQTILRSVKEHHLFTTGKADKRHVLTRILREVGELMV
                     QTRALVERLGTQSERVMQNTCSRLMAMHEVIKPLMGQIVHWVTTGEVAANKIVHVGIP
                     QARAIVRNKAGKKTEFGLAYLISRLGGGYLFGERIAANADERQMPLKALTGYRAIFGQ
                     EATPELVVYDRSGDSTPTRQRLALEGVRNIGIQPKGKRPWSVVEAVREQIRSERGRTE
                     GVIGTLKSNRYQFNKPKERLWQTLEMAGPRSILSFNLNKLMRDVVALTR"
BASE COUNT          307 a          470 c          390 g          356 t
ORIGIN      
        1 cacacaatgg ggccctcctg gtacgcatcc gtcagcagcg cctgtcgaaa cggggacaaa
       61 agttccgccg attgcttgac ttgagacgct gtaatatcaa tcaaatcaat gagtcttaat
      121 tttagtcgca actatataga gtgtgtcgca gaattcatag gaggtcatct cgtcctccat
      181 tcttatcttc tccctctgta tctctcctct gtgttgactt cgttccgttc gtttctgtcg
      241 ctcatttagc gggtcagtgc caccacatcc cgcatcaatt tgttgaggtt gaacgagagg
      301 atagaccttg gccctgccat ctccagcgtc tgccacagac gttctttggg tttgttgaat
      361 tggtagcggt tgcttttcaa ggttccaatc accccttcgg tccgcccccg ctcgctgcga
      421 atctgctccc ggactgcctc gacaaccgac cagggccgct tgcctttggg ctgtatcccg
      481 atattgcgca cgccttccaa cgccagtcgc tggcgcgtcg gggtcgaatc gccactccgg
      541 tcgtagacca ccaactctgg cgtcgcctcc tggccaaaga tggcccggta tcccgtcagg
      601 gctttgagcg gcatctgcct ctcgtccgca ttggccgcga tgcgttcgcc aaagagatag
      661 ccaccgccca ggcgactgat cagataggcc aaaccaaact ccgtcttttt gcccgctttg
      721 ttgcggacaa tggcgcgggc ttgcgggatg cccacatgca cgattttgtt ggccgccacc
      781 tcgcccgtcg tgacccagtg cacgatttga cccatcagcg gcttgattac ctcgtgcatc
      841 gccattaggc gtgagcaggt attctgcatc acccgctccg actgtgtgcc cagacgctcg
      901 accagcgcac gcgtttgcac catcaactcg ccaacttcgc gcaagatgcg ggtcaacaca
      961 tggcgtttgt ccgctttgcc cgtggtaaag aggtggtgtt ctttgaccga gcgcaggatc
     1021 gtctgcacct gatccagggc accgtcgagt ccctgaacgc ctcgcttttg caactgcgtc
     1081 aaggcgcggc cacaacgttg ggccagcccc cgcaaaatgc ccggttcgtt gggatagccc
     1141 atggggagtt cctgtgccgt ggtatcggcc gacaaactcc cctcgtcgac aaagccaaag
     1201 cgatgggctt cttggatcac caagcggttg acggcgtcga tacccgcctt gcccaaagcc
     1261 gcataggccc gggcaatatt ggagtgatcc caaatttggg cgtggacctc gcggtggcgt
     1321 ccaatgaaca cccgcgccac cacgttctcg gccaagtacg cttccatttg gcgcgaatcg
     1381 aaacccttga tcagcatcag caccaccaac ggtacataag taccgatgca aaattaaatt
     1441 tatatctttt cctcgggaag ctaagcattg gcgccaaatg tggtggactc agcgccagaa
     1501 aatataaaaa taattgcgca cag
//
LOCUS       DASQSL010000046         1594 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_178999, whole genome shotgun sequence.
ACCESSION   DASQSL010000046 DASQSL010000000
VERSION     DASQSL010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178999"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1594
                     /locus_tag="VE844_00455"
     rRNA            <1..>1594
                     /locus_tag="VE844_00455"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          370 a          395 c          537 g          292 t
ORIGIN      
        1 ggggagtcag ttgctggggg ataaacttca gcgtcaagag ggaaacagcc cagaccgcca
       61 gctaagggcc ctaagtgatg gctaagtgga gaacgatgtc cgaatgcaca gacaaccggg
      121 aggttggctt agaggcagcc acccttgaaa gagtgcgtaa cagctcactg gtcaagtgtt
      181 cgggcgcgga gaattcaacg gggctcaagc catcccccga agctgcgggt gtgtcttagg
      241 acacgcggta ggagagcgtt ccctggccag tgaagcggcg gcgtaagcca gccgtggagg
      301 cgccggaagc gagaatgccg gcatgagtaa cgaaagaggg gtgacgaatc ccctccgccg
      361 attgtccaag gtttcctggg taaagttctt ctgctcaggg ttagtcggga cctaaggcga
      421 ggccgaaagg cgtagtcgat ggacaacagg ttgatattcc tgtaccacgt tgtttccgtt
      481 gacccgaggg gggacgagga aggctatgag agcccaggcg atggttgtcc tggggtaagc
      541 atgtaggggt ggcaccgtaa atgcggcgcc gcgtaacctg aggtgcgatg ccaggtggcc
      601 aacggccgcc gagttcctga agccatgccc ccaagaaaag cctcgcggcg aggagcagcg
      661 tgcccgtacc aaaaccgaca caggtgggca agtggagaac actaaggtga tcgagataac
      721 cttcgttaag gaactcggca aaatggtccc gtaacttcgg gagaagggac gccctagtag
      781 agtgaagccc ctcgcgggtg gagctcgagg gggccgcagt gaataggccc aagcgactgt
      841 ttaccaaaaa cacaggtctc tgctaagtcg taagacgacg tataggggct gacgcctgcc
      901 cggtgccgga aggttacgtg gaggtgttag ggcttcggcc cgaagcaccg aagctaagcc
      961 ccggtaaacg gcggccgtaa ctataacggt cctaaggtag cgaaattcct tgtcgggtaa
     1021 gttccgacct gcacgaatgg cgtaacgtgt tgggcgctgt ctcaacgatg ggctcggtga
     1081 aattgcagtc tcggtgaaga tgccgagtac ccgcggctag acggaaagac cccgtgaacc
     1141 tttactacaa cttggtattg gggtctggtg catctcgctc aggataggtg ggaggctgtg
     1201 aagcgccggc tgcggctggc gtggagtcaa ccttgagata ccacccttga tgtactaggc
     1261 ctctaacacc gctccgtgaa tccgggcggt gaacagtgcc aggtgggtag tttgactggg
     1321 gcggtcgcct cccaaaatgt aacggaggcg cgcaaaggtt ccctcagtac ggttggaaat
     1381 cgtgcgtaga gtgtaaaggc agcaagggag cttgactgtg agacagacat gtcgagcagg
     1441 tgcgaaagca ggccttagtg atccggcggt tgcaagtgga agcgccgtcg ctcaacggat
     1501 aaaaggtact ccggggataa caggcttatc gggcccaaga gtccacatcg acggcccggt
     1561 ttggcacctc gatgtcggct cgtcgcatcc tggg
//
LOCUS       DASQSL010000047         1565 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_151554, whole genome shotgun sequence.
ACCESSION   DASQSL010000047 DASQSL010000000
VERSION     DASQSL010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1565)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1565)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1565
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151554"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1565
                     /locus_tag="VE844_00460"
     CDS             <1..>1565
                     /locus_tag="VE844_00460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99879.1"
                     /translation="NELRDQLDTLLQQERRAVEEQLQQASSPSAEPHPPGPSQQQTAA
                     AEQRQEFLDNLPDSLPQQIQSLRQYEFLDPQAARAFQELLEELQKRAMGAQMNSRAEP
                     SGSSAADDAQAQSDMYRDLNQQLREKLRGQQPDFQQFKDQHPQFPSAREENLEGLVKQ
                     LQQQLQQWRSLTESLSESVRQELEQLMEANLGEELRAQRAELQKFLEQLAESKLPPQR
                     YRFKGREEVSLEQAQELMEQLRQAEELEKQLEGLRWNGDPQQVDADKLKEWLGEEAYQ
                     SVQHMKDLATALEEAGYLIKTKDGMQLTPRAMRKIGQKALRDIFFFIKRDRLGEHDTR
                     QRGGVGIATEETKPYEFGDPLLLDLGATVFNALSREGGGTPVSLHLDDFVVRRQEFLS
                     HTSTVILIDMSGSMAWNNCFYAAKKVALALDNLVRSAFPRDTLQIVGFYTAAEEMKPT
                     DLPYVKPKSFGYNASLYSDYYDMLMGYIDVQIDYRDVVRGRTNVPQGFTNMQQGLRMA
                     EQMLSKRQSPNKQ"
BASE COUNT          374 a          461 c          457 g          273 t
ORIGIN      
        1 aatgagctac gggaccaact agatacgctc ttacaacagg agcggcgtgc ggttgaggaa
       61 caactccagc aggcctcgtc accctccgcg gagccccacc cgccgggacc ttctcagcag
      121 cagacggcag ccgccgagca acggcaagag tttctggaca acctccccga tagcctaccg
      181 cagcaaatcc aatccctgcg ccagtacgag tttctcgatc cgcaggcggc gcgtgccttc
      241 caggaactgc tcgaagagct gcagaagcgt gccatgggcg cgcagatgaa cagccgagcg
      301 gagccatccg ggagttcggc ggcggatgac gcccaggctc agtctgatat gtaccgcgac
      361 ctcaaccagc agttgcggga gaaattgcgg ggacaacaac cggacttcca gcagttcaag
      421 gaccagcacc cgcaattccc gtcggcgcgg gaggagaacc tcgaggggtt ggtcaagcag
      481 ctgcaacaac aactccagca atggcggtcg ctcacggaaa gcctctcgga gagcgtacgt
      541 caggaactcg agcagctcat ggaggcgaac ctgggcgagg agctgagagc gcaacgggcg
      601 gaacttcaga aattcctcga gcagctcgcc gagagcaaac tcccccctca gcgctatcgc
      661 ttcaagggtc gcgaagaggt ctctctcgaa caggcgcagg agctgatgga gcaactacgg
      721 caggctgagg agctcgaaaa gcagcttgag ggcctgcgct ggaacggcga cccccagcaa
      781 gtcgacgctg acaaactcaa ggagtggctg ggagaagagg cctatcagtc tgtgcaacac
      841 atgaaggacc tggccacggc attggaagag gccggctatc tgattaaaac caaggatggc
      901 atgcaactca ccccacgcgc tatgcgcaaa atcggccaga aggcgctgcg cgacatcttt
      961 ttcttcatca aacgcgaccg cctcggtgag catgacacgc gccagcgtgg cggtgtggga
     1021 atcgcaaccg aagagaccaa accctacgag ttcggtgacc ccctgctgct cgaccttggg
     1081 gccacggtct ttaatgccct cagccgggaa ggagggggca ccccggtgtc attacacctc
     1141 gatgatttcg tcgtcaggcg acaggagttt ctgtcgcata cctcgacggt gatcctcatc
     1201 gacatgagcg gctcaatggc ctggaataat tgcttctatg ccgccaagaa agtggcttta
     1261 gcgctcgata atctcgtgcg cagcgccttt ccgcgcgaca cgttgcaaat cgtcggtttt
     1321 tacaccgccg ctgaggagat gaagcctacc gatctcccct atgtcaaacc gaaatctttc
     1381 ggctataacg cttcccttta cagcgattat tatgatatgt tgatgggata tatcgacgtg
     1441 cagatcgatt accgggatgt ggtgcgtggc cgcaccaacg tcccgcaggg ctttaccaat
     1501 atgcaacagg gattgcggat ggcggagcag atgctttcca aacggcaaag cccgaacaag
     1561 cagat
//
LOCUS       DASQSL010000048         1563 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_179009, whole genome shotgun sequence.
ACCESSION   DASQSL010000048 DASQSL010000000
VERSION     DASQSL010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1563
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179009"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..319
                     /locus_tag="VE844_00465"
     CDS             <1..319
                     /locus_tag="VE844_00465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020508279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZB99880.1"
                     /translation="ERPAGTLSHGQKQWLEIGMLLMQNPRLLLIDEPVAGLTHQETER
                     TAELLTALAGQHTVVVVEHDMEFIRSIGRRVTVLHEGRVLAEGKMHEIQDNPQVVEVY
                     LGV"
     gene            319..1011
                     /gene="urtE"
                     /locus_tag="VE844_00470"
     CDS             319..1011
                     /gene="urtE"
                     /locus_tag="VE844_00470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008079174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter ATP-binding subunit UrtE"
                     /protein_id="HZB99881.1"
                     /translation="MLNISRLNHYYGASHTLWDLDLEVPRGSCTCLIGRNGVGKTTLL
                     KCIMGLLSIHSGTIQLEGQDLVSLPAYRRAALGIGYVPQGREIFPLLSVEENLRIGLS
                     VRKARGPLLEAIFELFPVLGQMLHRCGGDLSGGQQQQLAIGRALVLEPKLLILDEPTE
                     GLQPNIVHEIGAIILRLNKEHGLTVLLVEQKLPFMQRVADRFCIMGKGRLMAAGALHE
                     LDDTLIRRYLTV"
     gene            1058..>1563
                     /locus_tag="VE844_00475"
     CDS             1058..>1563
                     /locus_tag="VE844_00475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020160164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreD"
                     /protein_id="HZB99882.1"
                     /translation="MAEVKPQAAGWQAQLKLGFEARAGRTVLIRRQHTGPLAVQKPFY
                     PESGTCHVYVLHPPGGVVGGDRLSIEVNLAQGAHAVITTPASTKFYRSSEALSVQAHS
                     LKVAEDATLEWLPQETILFAGCRVTTTTHAMLVPGARFIGWEIFCLGRPAANEPFDKG
                     ACRQRFEL"
BASE COUNT          316 a          450 c          475 g          322 t
ORIGIN      
        1 tgaacggcct gccggcacac tttctcatgg tcagaagcaa tggttggaga tcggcatgtt
       61 gcttatgcag aacccgcggc tcttgctgat cgacgagcca gtggccggcc tgacccatca
      121 ggagaccgaa cgaaccgctg aattgctcac tgccctggcc ggccaacaca ccgtcgtcgt
      181 ggtggaacac gatatggagt ttatccgctc catcgggcgc cgggtcacgg tgctgcacga
      241 agggcgggtg ctggctgaag gcaagatgca cgagatccag gacaatcccc aggtggtcga
      301 ggtgtatctg ggcgtctaat gctgaacatt agccgattaa atcattacta tggtgcgagt
      361 cataccctct gggacctcga tctcgaggtg ccgcgaggct cctgcacctg cctcatcggc
      421 cgcaacggcg taggcaagac cacgctgctc aaatgcatca tgggtctatt atcaatacac
      481 tccggtacga tccagctaga aggccaagac ctggtcagcc tcccggccta tcggcgggct
      541 gcccttggga tcggttacgt accgcaaggg cgcgagatat ttccgctact tagcgtggag
      601 gagaacttgc ggatcggttt gagtgtgcga aaagcgcgag gcccactact cgaagccatc
      661 ttcgagttgt ttcccgtgct tgggcaaatg ttgcatcggt gcggtgggga tctctccggc
      721 ggccagcaac agcagctcgc catcggccga gccctggttc tggaacccaa gctcttgatc
      781 ctggatgaac cgaccgaagg actgcagcct aacatcgtcc atgagatcgg cgctatcatt
      841 ctacgtttaa ataaagaaca cggtctgacc gtgttgctgg tagaacagaa attgcctttc
      901 atgcaacggg tggcagaccg cttttgcatc atgggcaaag ggcggctgat ggcggcaggc
      961 gccttacatg agctcgacga tacgctgatc cgccgctacc tgacggtcta agctcatggg
     1021 cgccctcaac ccgctcacga tcctcctctt ttagcgggtg gctgaggtaa agccccaggc
     1081 ggcgggctgg caggcccaac tcaaactcgg attcgaagcg cgcgcgggcc gaaccgtcct
     1141 tatccggcgg cagcatacgg ggccgctggc ggtacaaaag ccgttttatc ctgaatccgg
     1201 gacctgccac gtgtacgtgc ttcatccgcc agggggtgtg gtcggcggcg accggctgag
     1261 catagaggtg aatctcgccc aaggcgcgca cgccgtgatc accacccctg cctcgaccaa
     1321 gttttaccgc tccagcgaag ccttgtcggt gcaagcgcac tctcttaagg tagcggagga
     1381 cgcaacgctg gaatggttac cgcaggaaac gatattattt gccggctgcc gggtaacgac
     1441 gacaacccat gccatgcttg tgccgggtgc gcgatttatt ggctgggaga tcttttgcct
     1501 gggccggccg gcggccaatg agccttttga taagggtgcg tgtcggcagc gattcgagtt
     1561 gtg
//
LOCUS       DASQSL010000049         1739 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_423, whole genome shotgun sequence.
ACCESSION   DASQSL010000049 DASQSL010000000
VERSION     DASQSL010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_423"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..200
                     /locus_tag="VE844_00480"
     CDS             <1..200
                     /locus_tag="VE844_00480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99883.1"
                     /translation="FLMLLNAHHEPIHFVLPAYRSNARWQALLDTSNTFGRPPEGFYF
                     AGKAYPLQGRALALLIATEKL"
     gene            197..>1739
                     /gene="treZ"
                     /locus_tag="VE844_00485"
     CDS             197..>1739
                     /gene="treZ"
                     /locus_tag="VE844_00485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009205435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose trehalohydrolase"
                     /protein_id="HZB99884.1"
                     /translation="MKRRHSMPFGAEVRADGRVRFRLWAPAAERVDLCLGDVILPMTA
                     LKGGWFELITDRAGAGSHYCFRINRDRRVPDPVSRFQPYDVHGPSEVIDPASFRWQDG
                     GWKGRPWEETVIYELHVGAFTPEGRFSAVKDRLDYLVELGATAIELMPVADFPGTRNW
                     GYDGVLPFAPDACYGRPEDLKDLVQTAHTKGLMVFLDVVYNHFGPEGNYLHAYAPQFF
                     SQQRHTPWGGAINFDGPGSRVVRDFFIHNALYWLEEYHLNGLRLDAVHAIFDDSDPDI
                     FTEIAQAVHQGPGKARPIHLILENDRNAAHYLRQGYCAQWNDDIHHAFHTLLTGETEG
                     YYQDYADQPVWRLGRCLTEGFAYQGEPSRYRGGALRGEPSRNLPATAFVSFLQNHDQI
                     GNRAFGERLVMLAEARTLQAAIAVILLAPAPPLVFMGEEFGTTQPFLFFCHFEPALAR
                     AVTEGRRNEFGRFKDFADPAVRATIPDPSAWATFERSKLDWEQLTVPPHALWLEFYQQ
                     LLALRH"
BASE COUNT          326 a          536 c          511 g          366 t
ORIGIN      
        1 actttttaat gctgctcaac gcgcatcacg agcccatcca cttcgtgctc ccggcctacc
       61 gctccaacgc ccgctggcaa gcgctcctag acaccagtaa cacctttggg cggcccccgg
      121 aagggttcta tttcgcaggc aaggcttatc cgttacaagg ccgtgcgctg gcccttctca
      181 ttgcgaccga aaagctatga agaggcggca tagtatgccc ttcggggcag aggtgagagc
      241 cgatggccgg gtgcggtttc ggctctgggc acccgcggcc gagcgggttg acctctgtct
      301 tggggatgtg atcctgccga tgacggcgct taaggggggc tggtttgagc ttataaccga
      361 ccgggccggg gccggcagcc actattgctt tcgtatcaac agagacaggc gcgtcccgga
      421 cccagtctcg cgcttccaac cctacgatgt ccatggaccg agcgaggtga tcgacccggc
      481 tagctttcgc tggcaggatg gcggctggaa aggccgaccg tgggaggaga cggtcatcta
      541 tgagctccat gtaggcgcct tcacgcccga aggccggttt tcagcggtca aggaccggct
      601 cgattatctg gttgagcttg gagcgaccgc tatcgagctg atgccggttg cggatttccc
      661 cggcacgcgc aactggggct acgatggcgt acttcccttt gcaccggatg cgtgttacgg
      721 acgtccggag gatctaaagg atctggtgca aactgcccat accaagggcc tcatggtgtt
      781 cctggatgtc gtctacaacc actttggccc cgagggaaac tacctccacg cctatgcgcc
      841 gcagttcttc agtcagcagc gccatacgcc ctgggggggg gcgatcaact tcgatgggcc
      901 gggcagccgt gtggtgcggg atttctttat ccataatgcg ctctattggc ttgaggaata
      961 tcacctcaac ggcctgcggc tcgatgcggt ccatgccatc ttcgacgatt cggaccccga
     1021 tatctttacc gagatcgccc aagccgttca tcaagggccg ggaaaggcgc gccctattca
     1081 cctgatcttg gaaaacgacc gaaacgcagc ccattatctg agacagggct attgtgccca
     1141 gtggaatgac gatatccatc atgccttcca taccctgctc acgggcgaga ccgagggtta
     1201 ttatcaggac tatgccgacc aacccgtatg gcgcctcggg cgttgtttga ctgaagggtt
     1261 cgcctatcag ggcgaacctt cacgctaccg gggcggagct ctgcgcgggg aaccgagccg
     1321 caacttaccc gccacggcgt ttgtgtcctt cctgcaaaac cacgatcaga taggcaaccg
     1381 cgcttttggg gaacgtctgg tgatgctcgc agaagcgcgt acattgcagg ccgcgatcgc
     1441 agtcatcttg ctggctccag cgccaccgct cgtgtttatg ggagaggaat ttggcaccac
     1501 ccaacccttc ctctttttct gccactttga accagcgctt gcacgggcgg tcaccgaggg
     1561 ccggcgtaac gagtttggcc ggttcaagga cttcgccgat ccggcggtcc gggcaaccat
     1621 ccccgatccc agcgcctggg cgacctttga gcgctcgaag ctcgactggg aacagctcac
     1681 agtgcctccc cacgccctgt ggctcgaatt ttatcaacaa ctcctggcct tgcgtcacc
//
LOCUS       DASQSL010000050         1428 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_137769, whole genome shotgun sequence.
ACCESSION   DASQSL010000050 DASQSL010000000
VERSION     DASQSL010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1428)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1428)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1428
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137769"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..214)
                     /locus_tag="VE844_00490"
     CDS             complement(<1..214)
                     /locus_tag="VE844_00490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99885.1"
                     /translation="MRGELKGPGGFKLGAVIAPPGAREAFSGPYLASCVTRHASGDWG
                     DLTEEERRLNDLALEEGGPLVSFYRDS"
     gene            complement(936..1244)
                     /locus_tag="VE844_00495"
     CDS             complement(936..1244)
                     /locus_tag="VE844_00495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99886.1"
                     /translation="MEVLTTSLADGRRVLPVFSFEEEAALFLCLGVQGGWQVRRTGPG
                     ELVSLLYSPCRQVELVALDPMSEVETDVMNRFVSVERGRFVDILLRREASVTLFPYVP
                     "
BASE COUNT          330 a          433 c          405 g          260 t
ORIGIN      
        1 cggagtcgcg atagaaggaa accaacggcc cgccttcctc tagcgctagg tcgttgagcc
       61 tgcgttcctc ttcggtgagg tcaccccaat cgcctgaagc gtggcgtgta acacaggacg
      121 ccaagtacgg acccgagaac gcctcgcgcg cccctggtgg ggcgatcacc gcgcctaact
      181 tgaagccccc tggtcccttg agctctccgc gcatcgtctt ctcagaaaaa ccgtagggcg
      241 agcaagacca ggatgattac cattaggacg gcaatcacca gattcaaggc tccatcgcgc
      301 atttcctcct cctctcgctt cccactcttc gatgtctccg aaaggagcta tgaaggccgg
      361 agcctcgggg ttgtagaagg ctccggccac gtaggaataa gcgggagcca ggctgaaaaa
      421 gcaagcacat ccgtgggaaa gactcatgct cggtcaggca gcctggctcc ccgcatatct
      481 tgcaccttag gcaatcggta tgtgattagc ttgtgagagg catgagaaat ttcacagaga
      541 agtagacagc aggaagaggg ccagagagcc cctccgagcg ccgaaggtga agggatgacg
      601 cccggagggg tagagaaaga gggccggggg gctaccagag aggatctgca gtagcagaaa
      661 atgtgtgggg cccccggctg tagctgccac cctagcagca ggacgtcagg gagtgtagcc
      721 atatcggggg attctgtgcg aactcacatc aaatcttaac ggaacctcgg aagaaaaagc
      781 cggagcccct acagagaacg tgtgtatgga tcccggccaa tttctacccc tatgtgggtg
      841 gcaccctgca ggatgccggg tgcgaccatc cgagaacccc acttttccga cggagtaccg
      901 cgacgaccgc cgaggtttga agaggcaagt ggggcctagg gaacatatgg aaaaagcgtg
      961 acggacgcct ccctgcgaag gaggatatcc acgaatctgc cccgctccac actgacgaac
     1021 ctgttcatca cgtcggtctc gacctctgac atcgggtcaa gggccaccag ctcgacctgc
     1081 ctgcaagggc tgtagagtag cgaaacgagt tccccgggcc cggttcgccg aacctgccag
     1141 ccaccctgga caccaagaca gagaaagagc gcggcttctt cctcgaagct gaagaccggc
     1201 agtactctcc gaccgtcagc caagctcgtg gtcaacacct ccaacctgcc gcatctatgc
     1261 ctcgccagca accaatatgg gctgcgacgt accgccgcgt tcacagacca tccgacaagc
     1321 tgcggtgcct ggctcactcg tgcaatcctt tcgcgttctg tcggtacttc gcgcctttcc
     1381 cagaactctc tgaatcgcta actactgcat gatcgatgac ctttttct
//
LOCUS       DASQSL010000051         1580 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_137798, whole genome shotgun sequence.
ACCESSION   DASQSL010000051 DASQSL010000000
VERSION     DASQSL010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1580
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137798"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1030
                     /locus_tag="VE844_00500"
     CDS             <1..1030
                     /locus_tag="VE844_00500"
                     /inference="COORDINATES: protein motif:HMM:NF013753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZB99887.1"
                     /translation="VLLFVVAGIGYRRVSGLLAQLFLVQVSKSALHRWGEAIAQSLPS
                     ADEILKALNEKLPIREGHLDELFPRGSEACVLVLKDEHGRLLAAEEVKKRDEENVKPF
                     LERFKKLGLRFDAFYIDGCRAYYNAIRSVFGAAVAIQYDYFHIMQNAWRKLWKWALKR
                     RRQHKARSEQASTPWYKKKLMALAESLWDNRYVLFKAEERMSEEEKQQLSRIVETDPQ
                     VGRLRSFLGGVWRIFEDSTDEQQARAALAALKQLPVDRINSKPFEQVISFLEENFEWM
                     TAYLRHPGVKRNSLAESGMRVLRRLEIEHDGFRTSQGRENCLRIYQAVKYLGWTVHRS
                     PTQPATTT"
     gene            1062..1469
                     /locus_tag="VE844_00505"
     CDS             1062..1469
                     /locus_tag="VE844_00505"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HZB99888.1"
                     /translation="MREYARRTKAGIATTDNFGFVVNLPNRKSFNPDAAFYTGKPSGM
                     KFLEGAPVFAAEVRSENDYGPNAERELADKRKDYFAAGTVVVWDVDLLGPNVVRSYHC
                     TDLGNPKIYRRGALADAEPAVLGWRMPVDDLFS"
BASE COUNT          340 a          441 c          495 g          304 t
ORIGIN      
        1 ggtgctgctc ttcgttgtgg ccggtatcgg ctaccgcagg gtctcagggc tgctggcgca
       61 gctatttttg gtgcaggtct ccaagtcggc cttgcaccgg tggggcgaag ccatagcgca
      121 gagccttccg agcgccgatg agatcctcaa ggccctgaac gagaaactgc cgatccggga
      181 ggggcatctc gatgagctgt tcccgcgtgg ctctgaggcc tgtgtgctgg tgctcaagga
      241 cgaacatggc cgcctcctcg ctgcggagga agtgaagaag cgcgacgagg agaacgtcaa
      301 gccgtttctg gagcgcttca agaagctagg gctccgattc gatgctttct acatcgatgg
      361 ctgcagggcc tactacaatg ctattcgctc ggtcttcggg gcagcggtgg ccatccagta
      421 tgactatttc catatcatgc agaacgcctg gcgcaagctc tggaaatggg cgctcaagcg
      481 ccgccggcag cacaaggcta gaagcgagca ggccagcacg ccttggtata agaagaaact
      541 gatggctctg gccgagagcc tctgggacaa tcgctacgtc ctgttcaagg ccgaagagcg
      601 catgagcgag gaggagaaac agcagctgag ccgtatcgtc gagacggacc cgcaggtcgg
      661 ccgtctgcgc tcgttccttg gcggcgtgtg gcgcatcttc gaggacagca ccgatgagca
      721 gcaggcccgc gcagcgctcg cggcactgaa acagctgccc gtggacagga taaactccaa
      781 gcctttcgag caggtcatca gcttcctcga agagaacttc gagtggatga cggcctatct
      841 gcgtcacccg ggggtcaagc gcaactccct ggccgaaagc ggcatgcgag tgctgcgccg
      901 gttggagatc gaacatgacg gctttcgaac ctcgcaagga agagagaact gcttgcgcat
      961 ctatcaggcc gtgaagtacc tgggctggac cgtccatcgt tcacccacac aaccggctac
     1021 tacgacgtag atcaagtggg acacacccga tttttgcgag tctgcgtgag tacgcgcgcc
     1081 gtacgaaagc agggatagcg accaccgata atttcggctt cgtcgtaaac ctgccgaacc
     1141 gcaagtcgtt caacccagac gccgcgttct atactggtaa accttcgggg atgaagttcc
     1201 ttgagggggc accggtgttc gcagctgaag tgagaagcga aaacgattac ggccctaacg
     1261 ctgagcggga gttggcggac aagcgtaagg attattttgc ggcagggacg gtagtggtgt
     1321 gggacgtcga tttactaggg ccgaatgtgg tcagatccta ccactgcacc gatctaggta
     1381 atccgaagat ctatcgccgt ggcgcgctag ctgatgctga accggccgtg ctgggctggc
     1441 gcatgccggt tgatgacctg ttcagttaaa accctgacgg cttacccacc aagccgcgtc
     1501 taacctcgcc ttccacctgg ctcgcaccgg tgagggcaac ggcttcggac atatcacgat
     1561 aggaaatagg ggccagactg
//
LOCUS       DASQSL010000052         1833 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_179061, whole genome shotgun sequence.
ACCESSION   DASQSL010000052 DASQSL010000000
VERSION     DASQSL010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1833
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179061"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..275
                     /locus_tag="VE844_00510"
     CDS             <1..275
                     /locus_tag="VE844_00510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99889.1"
                     /translation="GGSHGCEEGIKVLTALLEQGDLLFSVRAFLRRTWSALRGFFTLL
                     ICLLACCQRVKNKIILPLDNATNRLTCEEYPTSFYFLLTGLDLAEP"
     gene            339..1397
                     /gene="glnL"
                     /locus_tag="VE844_00515"
     CDS             339..1397
                     /gene="glnL"
                     /locus_tag="VE844_00515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005958783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(II)"
                     /protein_id="HZB99890.1"
                     /translation="MALSTETRWLIDNLSTALFLFDRDLKLCAINTAGESLLSLGARQ
                     IMGQTVDELLKNSAITSAAQRALFTGHPLTERDIELHATGQAPINADCIVTPLAEAQY
                     VLGVMLEIINTDAQQWIRREETLIAQQNISRALIQGIAHEIKNPLGGIRGAAQLLERE
                     LSKASHREYTTLIINEVDRLRTLLDRMGEPNSLPQRRMINIHEVLEHIRGLVEAEAPA
                     GIVVKRDYDPSLPEVLADRDHLIQALLNIVRNAVQAMGNSGQILLRTRSQRQLTVGLK
                     HHKLVARMDVVDNGPGIPPELKDNIFYPLVTGRAEGTGLGLSIAQSLIHKQGGLIGFC
                     SEPGETIFTVWLPIESSI"
     gene            1394..>1833
                     /locus_tag="VE844_00520"
     CDS             1394..>1833
                     /locus_tag="VE844_00520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010323588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZB99891.1"
                     /translation="MTKREHVWVVDDDRAIRWVLEKALVQADMQVTSFTHADGVLKRL
                     VQEVPDAVISDIRMPGTNGLSLLEHIHHLHPDLPVIIMTAYADLDRAVAAFRGGAFEY
                     LPKPFDVDEVITIVRRAVKRHHTQTTALRAETRAETPEIVGAAPA"
BASE COUNT          414 a          510 c          505 g          404 t
ORIGIN      
        1 agggaggttc ccatggctgt gaggaaggca ttaaagttct cactgccctc ttggagcaag
       61 gcgatctctt gtttagcgtc cgcgcattct tgcgccgcac atggtctgca ttgcggggct
      121 tcttcacttt gctcatctgt ctgttagcct gttgtcaacg ggtgaaaaat aaaattattc
      181 tacctcttga caacgctaca aatcgcttaa cttgtgaaga ataccctacc tctttttatt
      241 tcctccttac tggcctagat cttgccgagc cataacccag gggtgatgat aatacgcgct
      301 attgcaccat agaggtgcgt tcatccgtaa aggggataat ggctctatct accgaaacac
      361 gctggttaat cgataatctc tccacagccc tgtttttatt cgatcgggat cttaaacttt
      421 gcgccatcaa tacagccggc gagagcttat tatccttagg cgcccggcag atcatggggc
      481 aaacagtgga tgaattgctc aaaaatagtg cgataaccag cgcggcgcaa cgggccttat
      541 tcacgggaca ccctttaacc gagcgggata tcgaactaca cgctacaggg caagcaccta
      601 ttaatgctga ttgtatagtc acccctctgg ccgaggcgca atacgtctta ggggtaatgc
      661 tggagattat aaacaccgat gcgcagcagt ggatccgccg cgaggagacc ttgattgccc
      721 agcagaatat atcccgcgcc ctgatccagg gaattgccca tgagatcaaa aatcccttgg
      781 gcggcatccg gggcgcggca caattgctgg aacgagagct cagtaaggca agccatagag
      841 aatatacgac gctcattatc aatgaagtgg atcgattgcg aaccctgttg gatcggatgg
      901 gggagccgaa cagcctgccc cagcgacgca tgatcaacat ccatgaggtg ctcgagcaca
      961 tacgtggcct ggtcgaggca gaggccccgg ccggcattgt ggttaagcgt gactatgatc
     1021 cgagtctgcc ggaggtgctc gcagatcggg atcatctcat ccaggccttg ctgaacatcg
     1081 tgagaaatgc cgtgcaggcc atgggtaaca gcggccagat cctgttgcgc acgcgctcgc
     1141 aacggcagct tactgtcggg ctcaagcacc acaagctggt cgcgcgcatg gatgtggtcg
     1201 acaacggacc ggggatcccc cccgagctaa aggacaatat cttttatccc ctggtcaccg
     1261 gccgggctga gggcacgggc ctcggcctct cgatcgcaca atcactgatc cacaaacagg
     1321 gcgggcttat cgggttttgt tcggaacctg gcgagactat atttaccgta tggcttccta
     1381 tcgagagtag tatatgacga aaagagagca cgtctgggtt gtcgatgacg accgggccat
     1441 tcgttgggtc ctggaaaagg ccctggtgca ggcggacatg caggtcacca gcttcactca
     1501 tgcggacggg gtactcaagc gtttagtcca agaggtgccg gatgccgtta tctccgatat
     1561 ccggatgccg ggcaccaacg gtttgagctt gctggaacat atccaccatc tccatcccga
     1621 tctccccgtc atcatcatga ccgcctatgc cgatctcgac cgggcggtcg cggccttccg
     1681 gggcggggcc ttcgaatacc tgcccaagcc tttcgatgtg gatgaggtca tcactatcgt
     1741 ccgccgtgcg gtcaaacgcc accataccca gacgaccgcc ttgcgtgccg aaacgcgggc
     1801 agagacgcct gagatcgtgg gtgccgcgcc ggc
//
LOCUS       DASQSL010000053         1346 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_55365, whole genome shotgun sequence.
ACCESSION   DASQSL010000053 DASQSL010000000
VERSION     DASQSL010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1346
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55365"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(87..335)
                     /locus_tag="VE844_00525"
     CDS             complement(87..335)
                     /locus_tag="VE844_00525"
                     /inference="COORDINATES: protein motif:HMM:TIGR01439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HZB99892.1"
                     /translation="MHEITVKLGSAGRLIIPASFRKALAISEGDHLILRLKEDRLELL
                     TQRQAIKNAQDLVRRYIPAGSNLAADLITEHRQEAARE"
     gene            complement(453..>1346)
                     /gene="xseA"
                     /locus_tag="VE844_00530"
     CDS             complement(453..>1346)
                     /gene="xseA"
                     /locus_tag="VE844_00530"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: protein motif:HMM:NF014640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HZB99893.1"
                     /translation="RRFPAVPVIIYPVPVQGAEAPAAITRAIAIADQRKECDVLILAR
                     GGGSLEDLWAFNEEVVARAIYACELPIVTGVGHEIDFTIADLVADRRAPTPSASAELV
                     SPDQGQLLSQLNGLERRFWNRMQVRLDRSSESLKWLSKRLVHPSRRLQDLAQRLDELS
                     LRLTLANRATLQQQAAKLATLIAEFRRIAPLHSVQALLNQYDYLNRRLIQAMGQGLTR
                     RVTQIIHLSQALHSLSPLATLERGYAIVTILPKGELVRDASYLNYGSQVQAKLARGRI
                     HCEVVAIFESEIDCKTKQPIP"
BASE COUNT          290 a          369 c          379 g          308 t
ORIGIN      
        1 cagtgcgggg gatcactgct gccacttggt cggctcccgc ttcatgattg agcaaattca
       61 gcagcgcaga ggcgtcgagt acgctcttat tcacgcgcgg cctcttgtct atgttccgtg
      121 attagatcgg cggccaggtt gctgccagcc gggatgtagc gtctcacaag gtcttgggcg
      181 ttttttatag cctgccgttg agtgagtaac tccagccggt cctctttgag gcgcaagatc
      241 aagtgatcgc cctcgctgat tgccaacgct ttgcgaaaac tggcgggtat aatcagccgt
      301 ccagcactac ctaatttaac cgtaatttca tgcatatacc aattctatat gatttgccat
      361 tatatagaat tacggaatga ccaaagtgct cgaagcctgg gcgtcctccc aggcggtgag
      421 cttagccttc tcggtaagca gcgggtcgat ggttagggga taggctgctt agttttacaa
      481 tctatttcag attcaaagat cgccaccact tcgcaatgga tccgcccacg ggcgagcttt
      541 gcctggacct ggctgccata gttgagatag cttgcatccc ggaccaactc ccctttcggc
      601 aggatagtca caatcgcata gccgcgctca agggtggcga gcgggctcag gctatgtaag
      661 gcctgactga ggtgaatgat ctgagttacc cttcttgtta aaccttgtcc catggcctgg
      721 ataagccgtc tgttgagata atcatactgg tttaaaagcg cctgtacaga atgaagggga
      781 gcgatacgcc gaaactccgc gatcaaggta gcgagctttg cggcctgctg ttgcagtgtg
      841 gctcggttgg ccaaggtaag gcgcagtgac aactcgtcaa gccgttgcgc caagtcttgc
      901 aggcggcggc ttggatgaac cagacgcttg ctcagccatt tgagagactc gctcgaccga
      961 tcaagccgta cctgcatgcg attccagaac ctgcgttcca gtccattcag ctggctcaat
     1021 aattgtcctt gatctgggct caccagttca gcgctggctg aaggagtagg ggcccggcga
     1081 tcggcgacta gatcggcgat ggtaaagtcg atctcatggc caacccctgt cacaatagga
     1141 agttcacagg catagatggc acgggctacc acctcttcgt taaatgccca gagatcctcc
     1201 aaggaaccgc cgcctcgagc caggatcaac acatcacact ccttgcgctg atcggcgata
     1261 gcgatggccc gggtaatcgc ggccggggcc tctgccccct ggacgggcac cgggtagatg
     1321 atcaccggca cggcggggaa gcgccg
//
LOCUS       DASQSL010000054         1430 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_69128, whole genome shotgun sequence.
ACCESSION   DASQSL010000054 DASQSL010000000
VERSION     DASQSL010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1430
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69128"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..509)
                     /locus_tag="VE844_00535"
     CDS             complement(<1..509)
                     /locus_tag="VE844_00535"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019079919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase family protein"
                     /protein_id="HZB99894.1"
                     /translation="MAFRNVIELIGHTPVVELTQFDTGPCRLFVKLENQNPGGSIKDR
                     IARSMIETAEQEGKIGPASTLIEATAGNTGLALALVAAHKGYRLRLVIPDKMSQEKIF
                     HLKALGTEIVMTRSDVGKGHPEYYQDVAERLAREIPNGFYINQFANPANPKAHEDDTG
                     PEIWQQMGQ"
     gene            complement(759..>1430)
                     /locus_tag="VE844_00540"
     CDS             complement(759..>1430)
                     /locus_tag="VE844_00540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013212696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HZB99895.1"
                     /translation="APYTSTIVFLVHKGNPKGIKDWEDLAKPGVSVITPNPKTSGGAR
                     WNYLAAWAYALKKYGNEKHARDFVKKLYQNIAVLDTGARGSTTTFVERGIGDVLLAWE
                     NEAFLAIKEKGGSQFQIVVPSLSILAEPPVAVVEKVADKHGTLKVARAYLDYLYSQEG
                     QEIAARHFYRPRDPTVAARHKNHPFTKVNLFTIDKAFGGWQKAQATHFVDGGVFDQIY
                     TPGGR"
BASE COUNT          260 a          430 c          411 g          329 t
ORIGIN      
        1 tgctgcccca tctgctgcca gatctcaggc ccggtgtcat cctcatgggc cttggggttg
       61 gcgggattgg cgaactggtt tatgtaaaac ccgttcggga tctcccgtgc gaggcgttcg
      121 gctacgtcct gataatattc cgggtgtccc ttaccgacat cggagcgggt catcactatc
      181 tccgtgccca gggccttcaa gtgaaatatc ttctcctggc tcatcttgtc cgggatgacc
      241 aagcgcagcc gatatccctt atgcgccgcg accagcgcca gcgccaggcc ggtattgccg
      301 gccgtcgctt cgatcagggt gctggccggt ccgatcttgc cttcctgttc cgccgtctcg
      361 atcatggagc gggcgatgcg atccttgatg gaccctccgg gattctgatt ctcgagcttc
      421 acgaacagcc ggcacggccc agtatcgaac tgggtgagct caaccacagg tgtatgaccg
      481 atcaattcaa taacatttct gaatgccata ggatcttagc ctttctaact gtagagaggt
      541 ttcacgcttg ttcccgatcc cctggccgca acctatcact tgcagcggac cgggcgccat
      601 tgagcaggcc aaactgtttg agtctggcgt gcagcacatt gcggctgatg tccagaaagc
      661 gcgcagtcta caactgatta tacccgcagt attgaaaggc cgcgcggatc accgtcttct
      721 cgatccgctc gtagcgctat tgtggttaaa acaaaggctt atcgcccgcc aggggtgtaa
      781 atctgatcga acaccccgcc atcgacgaag tgggtggctt gcgccttctg ccagccaccg
      841 aacgccttgt cgatggtgaa gagatttacc ttggtaaatg ggtgattctt atgccgcgcc
      901 gccaccgtcg ggtcccgtgg gcggtagaag tgtctcgccg cgatctcctg tccctcctgg
      961 ctatagagat agtccaggta ggcacgggcg accttgagcg tgccgtgttt gtcggcgacc
     1021 ttctccacca cagcgaccgg cggctcggcc agaatgctga gcgagggcac gacgatctgg
     1081 aattggctgc cgcccttttc cttgatggcc aggaaggcct cgttctccca ggcgaggagg
     1141 acatcgccaa tcccccgctc gacgaaggtc gtggtcgaac cgcgggcgcc ggtatcgagc
     1201 accgcgatgt tctggtagag tttcttcaca aagtcccgcg cgtgcttctc attgccgtat
     1261 tttttgagcg cataggccca ggcggccaga taattccagc gcgcgccacc cgaggtcttg
     1321 gggtttgggg tgatgaccga caccccgggc ttcgccagat cctcccaatc cttgatcccc
     1381 ttggggttcc ctttatgcac caggaacacg atggtggagg tatagggtgc
//
LOCUS       DASQSL010000055         1241 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_486, whole genome shotgun sequence.
ACCESSION   DASQSL010000055 DASQSL010000000
VERSION     DASQSL010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1241
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_486"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1241)
                     /locus_tag="VE844_00545"
     CDS             complement(<1..>1241)
                     /locus_tag="VE844_00545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99896.1"
                     /translation="STFPILYSLRDLTTAKLSATLNRLLAVIERDFYKASEMLSIATG
                     KEVFAVPNNIHISKSSSGHDPNRNYQPIGVIERGFAAERITYDQITKSRVPNVRTTRT
                     KFRKEILTVYRLDLDVAVDREILSDIEEDLLDLSEVFGDDPVIEQAWREYRALPKQGL
                     LLNYRQAWLNLALSALEYVEHWNWDLEWNTVVALRKINKITVGGWDVPIHGEKSYREV
                     LRWFLTKRAFQRGILKNGPLGDYILIKAVADGWLERSPYRTDELIRLEGELPVIDDLM
                     IHALGEEYIAAHQGIEVQSSIPLTLDALEISYKTEPSSVSAGMGTKYAVVFRQRGKPK
                     GPERVIPLHHVEAIQQAVEIGRDCAGKRERLEECLFDDRAFAALFGMHDFEYTQVGPG
                     GLITYNQDNKRQLIYHDPSLKR"
BASE COUNT          244 a          341 c          389 g          267 t
ORIGIN      
        1 cgcttgagcg acgggtcatg atagatcagt tgccgcttat tgtcctggtt gtaggtgatc
       61 aaaccgccag ggccgacctg ggtgtattcg aagtcgtgca tgccgaacag cgctgcgaag
      121 gcgcggtcat cgaacaagca ctcctcaagc ctctctcgct tgcccgcgca atcccgcccg
      181 atctccacag cctgctgaat ggcctcgaca tgatgcagcg ggatcacgcg ttccggccct
      241 ttgggcttgc cacgctgacg gaagaccacg gcgtacttgg tgcccatgcc ggcgctgacg
      301 gaggagggct cggtcttgta gctgatttca agggcatcga gggtcagcgg gatactggac
      361 tggacctcga tgccctggtg cgccgcgatg tactcctcgc ccagggcgtg aatcatcagg
      421 tcatcgatga ccggcagctc cccctcgagg cggatgagct catctgtgcg atagggactg
      481 cgctcgagcc atccgtcggc gacagccttg atgagaatat agtctccgag ggggccattc
      541 ttgaggatac cacgctggaa cgcccgcttc gtcaggaacc agcgcagtac ttcacgatac
      601 gatttctctc catggatcgg cacgtcccag ccaccaacgg tgattttatt gatcttgcgc
      661 agcgcgacga cggtgttcca ttccaaatcc caattccagt gttcgacata ctccagagcg
      721 gacagtgcca ggttgagcca ggcttgtcgg taattcaaca agagaccttg cttggggagc
      781 gcccgatact cgcgccacgc ctgctcgatc actgggtcgt cgccgaacac ttcggagaga
      841 tcgagcaagt cctcttcgat gtcggagagg atctcacgat caacggcgac atcgagatcc
      901 aggcggtaga cggtcagaat ctctttacgg aacttggtgc gtgtggtgcg aacgttgggg
      961 acccgtgact tggtgatctg gtcgtaggta atgcgctcgg ccgcgaagcc gcgctcgatg
     1021 acgccgatgg gctggtaatt gcggttggga tcgtgaccgg agctactctt gctgatgtgg
     1081 atgttattgg ggacggcgaa gacctctttg ccggtggcga tcgagagcat ttcagatgcc
     1141 ttgtagaagt cacgctcgat gacggccagg aggcgattca gtgtagcgct gagcttggcg
     1201 gtggtgaggt cccgtaggct atagagaatg ggaaaagtcg a
//
LOCUS       DASQSL010000056         1087 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_55375, whole genome shotgun sequence.
ACCESSION   DASQSL010000056 DASQSL010000000
VERSION     DASQSL010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1087
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55375"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(153..824)
                     /locus_tag="VE844_00550"
     CDS             complement(153..824)
                     /locus_tag="VE844_00550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018930552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99897.1"
                     /translation="MKITASRVIRWSGLSAIAAGIIFVVTQPLHPPDVLSSVTTPRWA
                     IVHIFSTAMCFLALLGITGLYARQVEETGWLGLVGYIVFSLFWALQTPYSFVEAFLLP
                     QLTTAAPEVVQGSLAIVVGGPGMNLGAFATVYQVVGLLYTLGGLLFGIATLRAGILSR
                     WAAGLLTVAPLVAPVGALLPGELVRIAAVPMGIALAWLGYALWSERRGQASDPVVAGG
                     SPQPR"
BASE COUNT          235 a          340 c          307 g          205 t
ORIGIN      
        1 gcgaacttct tagaactccg tcatggcgaa gttcgctgaa tctcccttcc acgtactccg
       61 gtgaataagc gcaagaagaa aggccgaggc tgctacgccc cggcccgtgt gccgctcctc
      121 gttgggttgg ctcacccgca aatagggcac tgttagcgcg gctgggggct tccccctgcc
      181 actacggggt ccgaggcttg ccctcgccgt tcagaccaga gcgcatagcc cagccaggcc
      241 agagctatcc ccatcggcac cgccgctatc cgcacgagct cgcccggaag aagcgcgccc
      301 accggggcca ccaaaggcgc gacggtaagc aggcccgccg cccagcgcga gaggatgcca
      361 gcgcgcagcg tcgcgatgcc gaacaatagg ccgccgagtg tatacagtag ccctactacc
      421 tgatataccg tagcgaaggc tccgaggttc ataccaggcc caccgacaac aatcgccaac
      481 gagccctgca caacctccgg tgccgcggtt gtcaactggg gcaagagaaa ggcttcgaca
      541 aagctatagg gcgtttggag cgcccaaaag aggctaaaca cgatatagcc gaccagaccg
      601 agccaacctg tctcttccac ttgcctggcg tagagccccg taatgccgag cagggcgagg
      661 aaacacatgg ccgtggaaaa gatgtggacg atcgcccatc gaggggtggt gactgacgaa
      721 agaacgtcgg gtggatggag cggctgggtg accacgaaaa tgatccctgc cgctatagct
      781 gacaagccgg accaacggat gactctcgac gctgtaatct tcactttact ctcctccctt
      841 tataacgact gtgggctggc gatttgcgtt ctcatgtgtt tgtctccttg acttactgct
      901 ttctgcccat cggtattcag gtggtattcg tgtgttcgcg tcctcctctt ggactagcgt
      961 gctgcgcgtc agggttcgcc atccgccacc tcacctactg tgattcgtgc tgtaagcgag
     1021 caactgcaga tgaattgaat cccctgacga tgagccagat gccaagcgac aactcccaaa
     1081 gggcctc
//
LOCUS       DASQSL010000057         1049 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_55378, whole genome shotgun sequence.
ACCESSION   DASQSL010000057 DASQSL010000000
VERSION     DASQSL010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55378"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            106..579
                     /locus_tag="VE844_00555"
     CDS             106..579
                     /locus_tag="VE844_00555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99898.1"
                     /translation="MAQQTEQRAVINGRNYVGFVIPGQFITIYRADEEFKAIDDGLEG
                     VWTFRSETLKPGANPTLNEGEIRHHFVNRLGEATVDQAGPSKADRFTGTLKALFRDFT
                     IPPMSIISLILAVLMLVAGVLLLVDAPALGPLLGGLVFGSAILLVLFAIFGPFMW"
     gene            604..>1049
                     /locus_tag="VE844_00560"
     CDS             604..>1049
                     /locus_tag="VE844_00560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99899.1"
                     /translation="MRASDQRSRHYSKLTRKDLKAPDEFIHATGRLLSFAGHHLRTLT
                     LILGGVIACIVIVWGLFAYFRGIEREAFASLWRVEAQLRQAPDAGAVPATAVEQLQQI
                     AHRFGAGEARGYAWLYLGHVYYRQGDYNAAASAYSQAAAQAQPGNLL"
BASE COUNT          207 a          305 c          301 g          236 t
ORIGIN      
        1 tcgacaggtg agaaaccccg gcagttgtga cccttcctgc agggtacgta cgcatgcgtt
       61 ggactctaca agcgcttctg atgacatcca catgaggtcg aggcgatggc gcagcagacc
      121 gagcagcgag cagtgatcaa cggtcgcaat tatgtgggat ttgttatccc tggacaattc
      181 atcaccattt accgtgcgga cgaagagttt aaggcgatcg acgacggact ggaaggtgtc
      241 tggacctttc gttccgaaac cctgaagccg ggtgctaatc ccaccctcaa tgaaggggag
      301 atccgacacc atttcgtcaa tcggcttggc gaggcaacag tcgaccaagc tggcccttct
      361 aaggccgacc gattcacggg cacgctgaaa gcactgtttc gcgattttac catccctccc
      421 atgtccatta tcagcctcat cctggcggtg ctcatgctgg tagcaggggt attactcctt
      481 gtcgacgctc cagccctcgg ccctttgctc ggggggctgg tgtttggcag cgccattctc
      541 ttggtgcttt tcgccatttt cggcccattt atgtggtagc ccgaaccatg gtaaggatga
      601 gagatgaggg catctgatca gcgttctcgc cattactcga agttgactcg taaagactta
      661 aaggctcctg atgagtttat tcacgcgacg ggacgcctcc tcagctttgc gggacatcac
      721 ctccggaccc ttactctcat cctaggcggg gtcattgcct gtatagtcat agtgtggggc
      781 ctgtttgcgt actttcgcgg gatcgaacgg gaggccttcg cgagcctctg gcgcgtcgag
      841 gcacagcttc gtcaggcgcc ggatgcgggc gcagtcccgg ccacagcggt tgagcagctg
      901 caacagatcg cccaccgatt cggggccggg gaagcacgcg ggtatgcctg gctctatctg
      961 gggcatgtct actaccgtca aggtgactac aacgcggcag cctcagccta ttcgcaggcc
     1021 gctgcacaag cccaacccgg caacctgct
//
LOCUS       DASQSL010000058         3777 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_492, whole genome shotgun sequence.
ACCESSION   DASQSL010000058 DASQSL010000000
VERSION     DASQSL010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3777
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_492"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1060)
                     /gene="trpB"
                     /locus_tag="VE844_00565"
     CDS             complement(<1..1060)
                     /gene="trpB"
                     /locus_tag="VE844_00565"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007194545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HZB99900.1"
                     /translation="MSSVAAVDSLAQGAGSPKFPDEFGHFGTYGGRFVAETLMKPLEE
                     LEQAYRRYLNDPLFMAELDKDLHHYVGRPSPLYYAQRWSERLGGARIFLKREDLNHTG
                     AHKINNTVGQALLAQRMGKSRIIAETGAGQHGVATATVAARMDMECVVYMGVEDIKRQ
                     ALNVYRMKLLGASVVAVESGSKTLKDALNEAMRDWVTNVDNTFYIIGTVAGPHPYPAM
                     VRDFQAVIGRETREQCLTQTGRLPDALIACVGGGSNAMGLFYPFIPETSVAFYGVEAA
                     GEGIETGRHAASLCAGRAGVLHGNRTYLLEDQDGQILDTHSISAGLDYPGVGPEHAWL
                     KDGGRARYVAITDEEALAA"
     gene            complement(1030..1701)
                     /locus_tag="VE844_00570"
     CDS             complement(1030..1701)
                     /locus_tag="VE844_00570"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015095888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004640 - phosphoribosylanthranilate
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HZB99901.1"
                     /translation="MSPKFSTGARVRVKICGITRPQDARCAVELGADAIGLVFYEQSP
                     RAVTLVQAHQMVNALPPFVTKVGLFVDASERTIRGILKSIPLDLLQFHGDERAEDCAH
                     YGRPYIKAFRVHAGIDIAKLAEPYREASGILLDAFVEGKHGGTGRVFDWALVPRDLPK
                     PIILAGGLTPDNVAAAIAAVRPYAVDVSGGVEVRKGIKDPDKMHAFMKSVWSAECLVL
                     QQSIA"
     gene            complement(1767..2546)
                     /gene="truA"
                     /locus_tag="VE844_00575"
     CDS             complement(1767..2546)
                     /gene="truA"
                     /locus_tag="VE844_00575"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002808568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HZB99902.1"
                     /translation="MKLALGLEYDGSGFYGWQVQSAVRTVQACVEEALSEVASHPVTV
                     YCAGRTDTGVHARGQVIHIETHSHREARAWVLGTNVNLPRDISILWAQPVENDFHARF
                     SAIGRSYRYLILNRPTRPGLLCPQLTWECRHLDENRMQEAANYLVGEYDFSAYRAQGC
                     QAKDPVRTVYRLNVTRKGSIIVIEIEANAFLYHMVRNIVGVLMAIGRGEASPSWAKDV
                     LDGGKRTHGGITAPAKGLYLTGIRYPARYSLPQPETVLLPL"
     gene            complement(2596..>3777)
                     /locus_tag="VE844_00580"
     CDS             complement(2596..>3777)
                     /locus_tag="VE844_00580"
                     /inference="COORDINATES: protein motif:HMM:TIGR03504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FimV/HubP family polar landmark protein"
                     /protein_id="HZB99903.1"
                     /translation="EVYYAANDKLAYEDQARSLYDAVGGKGPLWESALAMWREMSPGR
                     ALFTREVGETPVQERGASTQFIDITHTGEALAIPAMGATLAGMTKTDSRVDFDLTAAP
                     DLQEVSAAEDPAREGTAKAESELDFDLTAASQSQGDGENIEDIFDLTSASAEKMDRFD
                     ISMANIKPALEPPALASAPDMKDISLPGEERLFSHLANPLKLSSSEEDFGDFSGGYFD
                     EEGDIFDLTASGNEWPKSAVSSSNESDLQAQRDSSEQKREDKLEVAKDDKEIKADADA
                     ERAGSEKFESGEDDNPSFDTVDLLNMRQSLSTEERKSLGDLQRLFEDPVIASEHPVNE
                     ERDEAEAEEPEEEMDVKLNLAKAYMELGDVDGARSILDEVTQDGTEGQKREARQLLNE
                     L"
BASE COUNT          836 a         1138 c          915 g          888 t
ORIGIN      
        1 acgccgccag ggcctcctca tcggtgatgg cgacatagcg tgcgcggccc ccgtctttaa
       61 gccaggcatg ctcaggccct acacccggat aatcgaggcc tgcggagatc gagtgggtat
      121 ccaggatctg gccatcctga tcctcgagca gataagtgcg attgccatgc aagactcccg
      181 ctctccccgc acaaagcgag gcggcatgtc ggccggtttc gatcccctcg cccgctgcct
      241 ccacaccata gaaggccaca ctcgtttcag gaataaatgg ataaaacaga cccatggcat
      301 tggagccgcc gccgacacag gcgatcaagg cgtcgggcaa gcggcccgtc tgcgtgagac
      361 actgctcccg cgtctcgcga ccgatcacag cttgaaaatc ccgcaccatc gctggatagg
      421 ggtgcgggcc cgctaccgta ccgataatgt agaaggtgtt atcgacattt gtgacccagt
      481 cgcgcatggc ctcgttcaaa gcgtctttga gcgtcttgga tccggactcg acagccacca
      541 cggaggctcc caagagcttc atgcggtata cgttgagggc ctggcgcttg atatcctcaa
      601 cgcccatata gaccacacat tccatgtcca tacgggcggc gaccgttgcc gttgccacac
      661 cgtgttgccc tgcgccggtc tcggcgatga ttcggctttt gcccatacgc tgtgccaaca
      721 aggcttgtcc cacggtgtta ttgatcttat gagccccggt gtgattcaag tcctcgcgtt
      781 tgaggaagat cctggccccg ccgagccgct ctgaccagcg ctgcgcataa tagagagggg
      841 atggccgccc cacataatgg tgcagatctt tatcaagctc ggccataaat aaggggtcat
      901 tcagataacg ccggtaggct tgttcgagct cttcgagcgg tttcatcagg gtctctgcta
      961 cgaaccggcc gccataggta ccaaaatggc caaactcgtc tgggaatttg ggagatcctg
     1021 caccttgagc taggctatcg actgctgcaa cactagacat tccgcactcc acacactttt
     1081 catgaacgca tgcattttat caggatcctt gatccctttg cgcacttcaa cacccccgct
     1141 cacatcaacc gcatagggcc gaactgcggc tatcgcagcg gcgacattat caggcgtcaa
     1201 gcctcctgcc aagatgatcg gtttgggaag atctcggggc acgagtgccc agtcgaacac
     1261 ccggcctgta cccccgtgct ttccctccac aaaagcatcg agcaggatcc cactcgcctc
     1321 ccgataaggc tcggcgagct tggctatgtc tataccggca tgcaccctga aagctttaat
     1381 ataaggacga ccataatggg cgcagtcctc ggcacgctca tcgccgtgaa actggagtag
     1441 atccaaaggg atgctcttga ggatcccccg gatagtccgc tcgctggcat cgacaaacaa
     1501 tcccacctta gttacgaagg gtggcagggc gttcaccatt tgatgggcct ggactagcgt
     1561 cactgcccgc gggctttgtt cataaaacac caaccctatg gcgtctgcac ctaattctac
     1621 ggcgcatcgt gcatcttgag gccgggtgat cccgcagatc tttactctta cccgagcacc
     1681 cgtggagaat ttagggctta tatctgccac ggcggcttct gtatgtttat tgatccgatc
     1741 caggcgggaa atgcccgcta aagttactat agcggcagca acaccgtttc aggctgtggc
     1801 agggaatatc tggccggata tcggatccct gtcagataaa gacctttggc aggcgctgtg
     1861 atccccccgt gtgtccgctt gcctccatcg agcacgtcct tggcccatga agggcttgct
     1921 tctcctctcc cgatcgccat caaaacaccg acgatattgc ggaccatgtg ataaagaaag
     1981 gcattggcct caatctctat aacgatgata gagccctttc gagtcacatt taaacgataa
     2041 acagtgcgta ctggatcttt tgcctggcag ccctgggcgc gataggcgga gaaatcatac
     2101 tcgcctacca gataattggc tgcctcttgc atcctgtttt cgtctaagtg cctgcattcc
     2161 caggtgagct gggggcataa tagacccggt cgggtagggc ggtttaagat aagatagcga
     2221 tagctccggc cgatcgcgga aaatctcgcg tgaaaatcgt tctccaccgg ctgggcccac
     2281 aagatactta tatcccgtgg cagattaaca ttggtgccca atacccatgc gcgtgcctca
     2341 cggtggctat gggtttcaat atggatcact tgaccgcggg catgtacacc tgtatcggtg
     2401 cgtcccgcgc aatacactgt tactggatgg ctagcaacct ccgagagcgc ttcctcgaca
     2461 caggcttgca ccgtgcgcac agccgattgc acctgccatc cataaaagcc actgccgtca
     2521 tattcaaggc cgagtgctaa tttcaccact caagcttagc tacccttttc aagggggtag
     2581 ctaaccaact gtgcatcaaa gttcattcag taactgccga gcctctcttt tttgtccctc
     2641 cgtcccatct tgggtcactt cgtcgagtat cgaccgagca ccatcaacat ctccaagctc
     2701 catataggcc ttggccagat tcagtttgac atccatttcc tcttccggct cttcagcctc
     2761 tgcctcatct cgctcctcat taacagggtg ctcagaggct attacggggt cctcaaatag
     2821 gcgctggaga tcaccgagcg actttctctc ttcggtggac agagattgcc tcatatttaa
     2881 tagatccacg gtatcaaagg atgggttatc atcttctcct gattcaaact tctcagatcc
     2941 agcgcgctct gcatccgcat cagcctttat ttctttatca tccttagcta cttctagctt
     3001 atcttcgcgc ttttgttcgc tactgtcccg ctgcgcctgc aagtccgatt catttgaaga
     3061 actgaccgct gacttaggcc attcattacc acttgcagtt aaatcgaaga tatcaccttc
     3121 ctcatcaaaa taaccaccag aaaagtcacc aaaatcctct tcgctactgg ataacttgag
     3181 cggattagct aaatgtgaaa aaagacgctc ttctccaggc aaagagatgt ccttcatgtc
     3241 aggcgcactc gccagggcgg ggggctccaa cgccggcttg atattagcca tgctgatatc
     3301 aaacctatcc atcttctcag cagaggcgga ggtaaggtca aaaatgtcct ctatgttctc
     3361 tccatcccct tgagactgcg aggcagcggt caaatcaaaa tcaagttcac tctcggcctt
     3421 ggcagtacct tcccgagcag gatcttctgc agcagacacc tcctgaagat ccggggcagc
     3481 ggtcagatca aaatcaaccc tactgtcggt tttggtcatg cccgccaagg tggcacccat
     3541 agcaggtatc gcgagtgcct cgcctgtatg cgtgatgtca atgaactgtg ttgatgcccc
     3601 tcgctcctgc accggtgtct ctcccacctc cctggtaaat aacgcccgtc caggtgacat
     3661 ctcacgccac attgcaagtg cgctctccca taatggccct ttccctccaa ccgcatcata
     3721 cagtgacctc gcctgatcct cataggccaa cttgtcgttg gcggcatagt aaacctc
//
LOCUS       DASQSL010000059         1635 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_110170, whole genome shotgun sequence.
ACCESSION   DASQSL010000059 DASQSL010000000
VERSION     DASQSL010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1635)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1635)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1635
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110170"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            162..1178
                     /locus_tag="VE844_00585"
     CDS             162..1178
                     /locus_tag="VE844_00585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018418421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZB99904.1"
                     /translation="MKLYGGIDLHSNNCVVVLLDEEDHVVYEKRLSNDLGYLLLELAP
                     YQGRIEGVVVESTFNWYWLVDGLMEAGYPVHLANTAAIQQYSGLKYTDDRSDARWLAH
                     LLRLKLLPEGYIYPKEERAVRDLLRKRSQLVRQKVTHILSIQNLMSRNKGMRLSADKI
                     RQLSDAEVERLLPQTDLARAVKSNLAVYRCLVEEVDGLEKVVKQRLKLRPSFQSLLTV
                     DGIGPILGMTIMLETGVISRFAGVGQFASYCRCVDSHKISNGKRKGSGNTKNGNKYLA
                     WAFVEAANFAIRYNPRVKRFYQRKKDKTNGMVALKAVAHKLARACYYVLRDQVPFQVE
                     KAFG"
BASE COUNT          382 a          376 c          523 g          354 t
ORIGIN      
        1 gatggtggag ccggctagat gattatcagg ccttgcatta acacatgagc tcatgtgtta
       61 atgcaaggcc tgataatcat ctagccggct ccaccatcga gcggtacagc ttgggaggga
      121 tgtaattacc caaactgagc gctcaataga ggagaccgac gatgaaacta tacggtggaa
      181 ttgatctgca ttcaaacaat tgtgtggtag tgctgttgga cgaagaagac catgtggtct
      241 atgagaaacg gttatcaaat gatctggggt atctactgct agagcttgca ccgtaccagg
      301 ggaggatcga gggggtagtc gtggaatcga cgttcaattg gtattggctg gtggatggtt
      361 taatggaagc gggataccct gtgcacttag ccaatacggc ggcgattcag cagtattctg
      421 ggctcaaata taccgatgat cgcagcgatg cccgctggtt agcgcatctg ttgcgactta
      481 agttgttgcc cgaagggtat atctatccga aggaggaacg ggcggtgcgg gacctattgc
      541 gcaagcgcag tcaactggtg cggcagaagg tgacgcacat cctcagcatt caaaacctga
      601 tgagccgcaa caaggggatg cgactgagtg ctgataagat caggcaattg agtgatgccg
      661 aggtcgagcg gctacttccc caaacggatc tagcgcgggc ggtgaaaagc aacctcgcgg
      721 tataccggtg tctggttgag gaagttgatg ggctggagaa ggtggtgaaa cagcggctga
      781 agctacggcc gagttttcaa tccctgctga cggtcgatgg tatcggtccg attctgggga
      841 tgacgatcat gttggagacg ggggttatta gccgcttcgc aggggtgggt cagtttgcgt
      901 cctattgccg gtgtgtggat agtcacaaga tcagcaatgg caaacgcaag ggtagcggca
      961 acaccaagaa tgggaacaag tatctggcct gggcctttgt agaggcggcg aacttcgcca
     1021 tccgatacaa tccgcgcgtg aagcgctttt atcagcgcaa gaaagacaag accaacggga
     1081 tggtggcgct caaagcggtc gcccacaagt tggcgcgggc ctgttattac gtgctgcggg
     1141 accaggtccc ctttcaggtg gagaaggcct tcggatgagc gaataacggt ttggctggga
     1201 cagcgaagcc cgaatagggg ttggcttaga accaaagagt ctgattggcc gctgtcccac
     1261 cctttaattc ggtagtccgt gaaggtaacc ggttttagcg gatacgcctc ggccgtgagc
     1321 cagcgaaggg aagacgctcc ttggagagcc ttagccatca aatctgtcat tgacagcgta
     1381 gttttgccac cctgtgtgtt ggacctcctt gtccactgct tcgggcggcg ccctacgctg
     1441 atcacaacac aggtggacac ggccgggcac cgacggtttt ctggggcagc aaagactgcc
     1501 aggggcaggc agagttctgc gtagggggca ttctgccaag gcctcgatcc tgatgggtga
     1561 ctggtgcgga tccgttaggg accgacgcca cgcgatcgaa aacagggatg cgtatcgacc
     1621 gagttattca ggcgg
//
LOCUS       DASQSL010000060         1519 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_179104, whole genome shotgun sequence.
ACCESSION   DASQSL010000060 DASQSL010000000
VERSION     DASQSL010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1519
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179104"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..784
                     /locus_tag="VE844_00590"
     CDS             <1..784
                     /locus_tag="VE844_00590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99905.1"
                     /translation="PLGCTFLNSYQVIEGQKRLNDALAACMREGRMDVTLDPLALFVL
                     GGAVDAEITNVFLHDLRYERFGTIEMKGFYNHAYRLGRPGFLKNTQVVEAFIKQHDRK
                     GGLFSRPRSPATKFITMLRSLRGALAVLAERPIMVDTGLYKDVLRPRTYSDTQAEIGN
                     FLANQPNHQARVKLLSGEHVVKTLPPPDSLPEHEIQARISAIKQSMRLAGLSKPVALV
                     EAEIRERQEKLRERPPNDAPPTSSTTGRPPRRLRQKPPPAFT"
     gene            928..1251
                     /locus_tag="VE844_00595"
     CDS             928..1251
                     /locus_tag="VE844_00595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99906.1"
                     /translation="MSKTDDPVVIIGYTLSQAIADGVLVEIFKNRWGQLSGGKPIVAT
                     AHLFGEVSLAGLLEIWNEYVTWRRNVEPTLPEADRLFHTHMNGKTVWVMEDGQAFTLM
                     YPEDY"
     gene            1330..>1519
                     /locus_tag="VE844_00600"
     CDS             1330..>1519
                     /locus_tag="VE844_00600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99907.1"
                     /translation="MALYIRKYGVPAGNGLQVTNRMMEALAFHVEKDFHVKVTIREPE
                     AKPGQGKPAGWLTLIMRQL"
BASE COUNT          357 a          410 c          441 g          311 t
ORIGIN      
        1 cccgttaggc tgcacgtttc tgaatagcta ccaggttata gaagggcaaa agcgcttaaa
       61 cgacgccctt gccgcctgta tgcgggaggg acgtatggat gtcacgcttg atccgcttgc
      121 cctctttgtg ctgggcgggg cggtggatgc ggagatcacc aatgtgtttc tccatgacct
      181 gcgctacgag aggttcggca cgattgagat gaaaggcttt tacaaccatg cgtaccgcct
      241 gggcagacct ggctttctga agaacacgca ggtggtggag gccttcatca aacaacatga
      301 cagaaagggg ggtctcttct cacgtccccg ctctcctgcc accaagttca tcaccatgct
      361 gcggtctttg cggggggcct tagcagtgct ggcagagcgt cccattatgg tcgataccgg
      421 gctctataaa gacgtcctca ggccgagaac gtacagtgac acccaggcgg aaataggcaa
      481 ttttttggcc aaccagccca atcatcaggc ccgggtgaag ctcttatccg gggagcatgt
      541 ggtgaagaca ctgcctccgc ctgactcgct ccccgagcat gagatacaag cgcgcattag
      601 tgccatcaaa caaagcatgc ggcttgccgg tctcagtaag cccgtcgccc tggttgaggc
      661 agagattcgc gagcggcagg aaaaactgcg ggagcggcca cccaatgacg cgccgccgac
      721 atcctcaacc accggccggc caccacgacg cttgcggcaa aaaccgccgc cggccttcac
      781 atagaagggc gatgattcat ctgagtcatt gcattgcgca ccgtgagttt ctctgcactc
      841 tatagagcat cggtatctat gctccgtagc cgcagggacg ctccccatga gggaagttat
      901 cagccctggg aaaggatggt gagatatgtg agcaaaactg atgacccagt agtaatcatt
      961 ggctacacgc tttctcaagc gattgcggac ggcgtattgg ttgagatttt caagaaccgc
     1021 tgggggcaac tctcaggcgg caaaccaatt gtcgcaaccg cacacctctt tggtgaggtg
     1081 agtcttgccg gactgcttga gatttggaac gagtatgtca cgtggcgccg aaatgtggag
     1141 ccaaccctgc cggaagcaga ccggctgttc cacacccaca tgaacgggaa aacggtctgg
     1201 gtgatggagg acggacaagc cttcactctg atgtacccgg aggactatta gttgctctgc
     1261 acactgctca ggacgcttcg tcctgggcag aatcagggta gctaaccctg gaaaggaggt
     1321 gagtaaaaaa tggcacttta tatcaggaaa tatggggtgc cggctggcaa cgggctacag
     1381 gtcaccaatc ggatgatgga ggcactcgcc ttccacgtgg agaaggattt tcacgttaaa
     1441 gttaccatcc gggaacctga agcaaagccg gggcagggca aaccagctgg ctggttgacc
     1501 ctgatcatgc gacagctca
//
LOCUS       DASQSL010000061         1303 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_69165, whole genome shotgun sequence.
ACCESSION   DASQSL010000061 DASQSL010000000
VERSION     DASQSL010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1303
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69165"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..680)
                     /locus_tag="VE844_00605"
     CDS             complement(<1..680)
                     /locus_tag="VE844_00605"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZB99908.1"
                     /translation="MGDKLVVRYPRINIQWGLAFNHKQKPFDDERVRKALSLAVNRYD
                     MAKVLDPLSGLSIVGGVIHPDSKFALPPEELQQMPGFGKDHEANIAEAKRLLAEAGYP
                     NGFKTVLSNRAIKLPYIDFGVYLVSSWKKIGVEAEHVLKESAVYIKDSRNHNFVINVD
                     PLGSPSKDPDVMLQNFITNGTGNIGLISDPEVDALYEKQKVELNEQKRIELVQEAQRK
                     VLSKMLWMP"
     gene            complement(670..>1303)
                     /locus_tag="VE844_00610"
     CDS             complement(670..>1303)
                     /locus_tag="VE844_00610"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZB99909.1"
                     /translation="PMGNIYNTLIKHDPHHHDDIVGDLAESWSRSEDGLTYTFKLRQG
                     VKFHDGTDFTSADAKASWDKIVFPPKNVVSTRQSLYQMVKSIEAPDPYTLVFRLHYPA
                     ASFIPSVALPYNNIYSKARLDEDLNWYKRNAMGTGPFKLKDLRRGAYLEVERNPNYWK
                     EGLPYLDGIKYYMIKDTSARAKSIRTGRTHVELRGFPPAEVEAMKKANGR"
BASE COUNT          273 a          355 c          350 g          325 t
ORIGIN      
        1 ggcatccaca acatcttact caggaccttc cgctgagcct cttggaccag ctcgatccgc
       61 ttctgctcgt tgagctcgac cttttgtttc tcgtataagg cgtccacttc gggatcacta
      121 atcaggccaa tgttaccggt cccattcgtg atgaagtttt gcagcatgac atctgggtct
      181 ttgctggggc tacccagggg atccacgttg ataacgaagt tatggttgcg agagtccttg
      241 atgtagacgg cgctttcttt cagcacgtgc tctgcctcga ccccgatctt tttccacgac
      301 gagaccaaat agacaccgaa atcgatgtag ggcagtttga tggcgcggtt actcaacacg
      361 gtcttgaaac cattgggata accggcctcg gccaaaagac gcttggcctc ggcaatatta
      421 gcttcgtgat ctttgccaaa gcccggcatc tgttgcagtt cttccggcgg cagggcgaat
      481 ttggaatccg gatgtatgac acccccgacg atactgagac cgctcaacgg gtcgagcacc
      541 ttcgccatgt catagcggtt aacagccagc gacaacgcct tgcgcacgcg ttcgtcatca
      601 aaaggcttct gcttatgatt gaatgccaag ccccactgga tgttaatgcg cggatagcgc
      661 accacgagct tatcgcccat ttgctttttt catggcttcc acctcggccg gcggaaagcc
      721 gcgcagttcc acatgggtgc ggcccgtgcg gatcgacttg gcccgcgcgg aggtatcctt
      781 gatcatgtag tacttgatgc cgtcgaggta aggcaggcct tctttccagt agttgggatt
      841 gcgttcgact tctaagtagg ccccacgcct caggtccttc agcttgaagg gacctgtacc
      901 catggcattc cttttgtacc agttgaggtc ctcatcgagg cgtgctttgg aataaatatt
      961 gttgtagggc aatgccacac tcgggatgaa cgacgccgcc ggataatgca gacgaaagac
     1021 caaggtgtag ggatcgggcg cttcgatgct tttgaccatc tgatagaggc tctggcgggt
     1081 actcaccaca tttttgggcg gaaaaacgat tttgtcccag ctcgccttgg catcagccga
     1141 ggtaaagtcg gtgccatcgt ggaacttcac cccctggcgc aacttgaagg tgtaggtcag
     1201 gccatcctca ctcctcgacc acgattcagc caggtcgcca acgatgtcat catgatgatg
     1261 agggtcatgc ttaatcaggg tgttgtagat attgcccatg ggg
//
LOCUS       DASQSL010000062         1648 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_69167, whole genome shotgun sequence.
ACCESSION   DASQSL010000062 DASQSL010000000
VERSION     DASQSL010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69167"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..611
                     /locus_tag="VE844_00615"
     CDS             <1..611
                     /locus_tag="VE844_00615"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1698 domain-containing protein"
                     /protein_id="HZB99910.1"
                     /translation="TGFSTAAEFMKSSVEYRTMNVYDVDPEEIGTFDIIFFLGVLYHL
                     RAPLLALDRLSEVAKPGSTIWVESHVIDRGFVDPKTQEFRKLASIAPNLVDVPMAQFY
                     PDRLLAENPTNWWGPNLAGLKAMVESAGFEILRSRLIGTRGLVVARKVDDAEITFYRN
                     FDREEMTGDEGMAWEDVKKWIETKKTREAARRRDRSSQPEDA"
     gene            644..1468
                     /locus_tag="VE844_00620"
     CDS             644..1468
                     /locus_tag="VE844_00620"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HZB99911.1"
                     /translation="MQHDRLGPISTVETTYLGHPFVYPSDSLIGAAFIDKGKEWDAIL
                     RTIVPVLLPKEEPAICEVGSNIGASLLQILAVKPHARVLACEPSNRFRPFLERNLELA
                     GFDHVEVLPLLLGSKSGSMWLYNNASSASVVSADYDGHEPRGRELIEMTTLDEVFRNR
                     DPVHFIKIDTDGFDLEILRGAEDTLRRDKPIVYFELDVDLLSTPDTDLTWLQALGYQQ
                     LVCLEPEGGLIGMTDDPDQAIAWADAREYCDVLVCQMNSPSEARLGRLLLRPALSV"
BASE COUNT          365 a          448 c          481 g          354 t
ORIGIN      
        1 tgaccggctt ctccactgcc gcggagttca tgaaatcttc cgtagagtac cggacgatga
       61 acgtctacga cgttgatcct gaagagattg gcacctttga catcatcttc ttcctgggcg
      121 tcctctacca cctgagagct ccgctgctcg ccctcgaccg gctatcggag gttgcgaagc
      181 ccggctcgac gatctgggta gagtcccacg tcatagaccg cggttttgtg gatccgaaga
      241 cgcaggagtt tcgtaagctc gcttccatag cgccgaatct cgtggatgtg ccgatggccc
      301 agttctatcc tgataggctt ttggcggaga atcccacaaa ctggtggggg ccgaacctgg
      361 cgggattgaa ggccatggtc gagtctgcgg gcttcgagat cctccgctcc cggctcatcg
      421 gcacccgcgg gctcgtcgtc gctcgtaagg tcgacgacgc cgagatcacc ttctatcgta
      481 acttcgaccg cgaagaaatg accggtgatg agggtatggc gtgggaagat gtaaagaaat
      541 ggatcgaaac caaaaagact cgagaggcgg cacgccggag agatcgatca agccagccag
      601 aggatgccta actgaagggg aatttgaaga aggaaagcaa ctcatgcagc atgaccggtt
      661 aggtccgatc tcgaccgtag agacaaccta cctcggtcac cctttcgtgt atccgtcgga
      721 cagcttgatc ggcgccgcat ttatcgataa aggcaaggaa tgggacgcca tccttcgtac
      781 gatagtgccc gtactcttgc cgaaggagga accagcaatc tgcgaggtgg gcagcaatat
      841 cggtgcgagc ttgctgcaga tactcgccgt aaagccgcat gcccgcgtac tggcctgcga
      901 gccgtccaat cgtttccgcc ctttcctcga acgtaatcta gagttagccg ggttcgacca
      961 cgttgaggta ctccctctgc tgttggggag caaatccggc tcgatgtggc tctacaacaa
     1021 cgccagctct gcgtcggtgg tcagcgcgga ctacgacggc cacgagcctc gcgggaggga
     1081 actgatcgag atgacgacgc tggatgaggt tttccgcaac cgcgatccgg tgcacttcat
     1141 caagatagac acagacggct tcgacttgga aatactgcga ggcgctgagg atacgttaag
     1201 acgcgacaag ccgatcgtgt acttcgaact cgatgtggat ctcctttcta ctcctgatac
     1261 cgatctaact tggttgcagg ctctgggata ccagcaacta gtttgtctag aaccggaggg
     1321 cgggttgatt gggatgaccg acgatcccga tcaggccatc gcttgggccg acgcacgtga
     1381 gtactgcgat gtgctcgtgt gccagatgaa ctcgccgtcc gaagcacgtc tcggacgctt
     1441 gctacttcgc ccggcgttat cggtgtgatc tttagcatcc caaagacatt tgctacagtt
     1501 attgtggcgc gatgtcgtaa gcggacgcca ccaagaatgc agggaagagc atttggcagc
     1561 ggtgtccaca agccattaat gagcggcctc gttttggtgg acactcgccg gttctcaaaa
     1621 cgagaaagga acgatctcgt attagcga
//
LOCUS       DASQSL010000063         1313 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_41718, whole genome shotgun sequence.
ACCESSION   DASQSL010000063 DASQSL010000000
VERSION     DASQSL010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1313
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41718"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1067
                     /locus_tag="VE844_00625"
     CDS             <1..1067
                     /locus_tag="VE844_00625"
                     /inference="COORDINATES: protein motif:HMM:NF033592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZB99912.1"
                     /translation="FHNQLVKATFPTFMCTVWEHLMTQLTIEVLRFTPQSPFARFTHI
                     TLHDGTSFGVKSTLKKTFPGRFTKTSPAAVELHVSMELLSEGVDTVTLTPDKESEVHH
                     APAPNTMRGGLFLGDRMFFIKAYLAQIIAHGGYFIIKAKGLINPLIRHAYTLEGGELK
                     RFGNQPLKTLKSKVSKYKALDLEVVWEGELEARLIVTWDAKNKRPRYLVTHLPRADFT
                     LEQVGDAYRLRWQVELMFKEWKSYTSLHAFDTSKANIAQGLIGAALCAAILKRYCAHL
                     AQRLGQVPISTRKVAMCLHHVLFDIFRALMHSQRQLQKTIQRALHYLSLNAQRAHPKR
                     DQRSGRLKLGLEHVYGVLKN"
BASE COUNT          307 a          388 c          333 g          285 t
ORIGIN      
        1 ctttccacaa ccaattagtg aaggccacct ttccgacctt catgtgcacg gtgtgggagc
       61 acttgatgac gcagctcacg atcgaggtct tgcgtttcac gccccaaagc ccctttgctc
      121 gattcaccca catcaccctc cacgacggta cctcctttgg cgtgaaatcc acgctgaaga
      181 agacctttcc cggacggttc accaagacga gccctgcggc ggtggagttg cacgtgagca
      241 tggagcttct cagcgagggg gtggacaccg tgacactgac ccccgacaaa gagtccgaag
      301 tgcatcacgc ccccgccccg aacacgatga gaggagggtt attcctcggt gatcggatgt
      361 tcttcatcaa agcgtatctg gctcagatca tcgcccacgg cggctacttc atcatcaagg
      421 ccaagggcct catcaacccc cttatccgcc atgcctatac ccttgaagga ggcgagctca
      481 aacgctttgg taaccaaccg ctgaagacct tgaagtctaa ggtgtcgaaa tacaaggcac
      541 tcgatctgga ggtggtctgg gagggggagc ttgaggcgcg cttaatcgtg acctgggacg
      601 caaagaacaa aagaccgcgc tatcttgtta cccatctccc gcgtgcggat ttcaccctcg
      661 agcaggttgg tgatgcgtat cggctgcgct ggcaggtgga gctgatgttc aaagagtgga
      721 agagctatac gagtctgcac gccttcgata cctccaaggc caacatcgcc cagggactga
      781 tcggagccgc gctctgtgcg gctatcctca aacggtactg cgcacatctg gcccaacgcc
      841 tcgggcaggt gcccatctcc acccgcaaag ttgccatgtg tctccatcac gtgctcttcg
      901 atatcttccg cgcgttgatg cactctcagc gtcaattgca gaaaactatc cagcgcgctt
      961 tgcactacct ttctctcaac gcacagcgcg ctcaccccaa gcgagaccag cgctcaggac
     1021 gcctgaaact cggcttggag cacgtttatg gcgtccttaa gaactaacct atgaagactt
     1081 gattgatatc gaggatacct cacactatca agtgtcattc cggctatacg agaatctaca
     1141 gtaaaacatg atcccaccca ggatctcata tcagctagga gccgtgtgag ttcgaaagtc
     1201 tcatgcacgg ttttgaatta gaggcgcgga atggtgacat tcccgtcgac taaaacagcg
     1261 gaaaatcgta ggttaccggt cgaaacatca tctcggtatc ggtatcctct tcg
//
LOCUS       DASQSL010000064         1466 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_124142, whole genome shotgun sequence.
ACCESSION   DASQSL010000064 DASQSL010000000
VERSION     DASQSL010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1466
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124142"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            62..>1466
                     /locus_tag="VE844_00630"
     CDS             62..>1466
                     /locus_tag="VE844_00630"
                     /inference="COORDINATES: protein motif:HMM:NF033559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZB99913.1"
                     /translation="MQQPYRSHSLDHLGLVAGMFDELGIGDVIDRATQQNPETRIVTV
                     GNAVKAMVLNGLGFVNQQLYLVPMFFHNKPTSRLFAPGIDAQHLNDDTLGRSLDTLYD
                     YGVTALYSLVATSAAQRLGLTPTFAHLDSTSFHVDGRDNSAEEPDTHIIHITRGYSRD
                     HRPDLNQVMLDLIVEHQAGIPLLMQPLSGNTSDAIDFRHVVTEHIAQLHATYGTAYLV
                     ADSALYNEENLQQLARTQSKWITRVPATLSEAQEALADADPEAMEPLLAGYRAQSRAS
                     TYGGVAQRWVLIYSEHRRPQAQRTVEKQLLTQSAAEVKAFRRLGRTAFACEADAQQAL
                     ATFAQGLQATRIHEVTIQPTFRYARPGRPGKVTVPDAQVYYIEGALTSSLAVREALVA
                     QHSCFILATNELEEHALSPQALLAGYKGQKHAERGFRFLKDPLFLASSLYLKKPERIM
                     ALLMVMTVCLLVYAALEY"
BASE COUNT          307 a          455 c          414 g          290 t
ORIGIN      
        1 attctgtttt cataattttg ggggggcgta gaatcctctg cgagagagga ggagccaccc
       61 tatgcagcag ccttaccgta gccacagctt ggatcatctg gggttggtgg ccgggatgtt
      121 cgacgaattg ggcatcggcg acgtgattga ccgagcgacc cagcaaaacc cggagactcg
      181 tattgtcacc gtggggaacg ccgtcaaggc aatggttctc aacgggctcg gctttgtgaa
      241 ccaacagctc tacttggtgc cgatgttttt tcacaataag cccacctccc ggctctttgc
      301 cccgggcatt gacgcccagc acctcaacga tgataccctc gggcgctcct tggatacgct
      361 ctatgactat ggagtcaccg ccctctacag tctcgttgcg accagcgctg cccaacgcct
      421 tggtttaacg ccaacctttg cccatctgga cagtaccagc ttccacgtcg atgggcggga
      481 caacagtgct gaggagcccg acacgcacat cattcacatc acccgcggct acagccgcga
      541 tcatcgacct gacctgaatc aagtcatgct ggacttgatc gtcgaacacc aagctggcat
      601 cccgttgctg atgcaaccgc tcagtggcaa taccagcgat gcaatcgact tccggcatgt
      661 cgtcaccgag cacattgcgc agctgcatgc gacctacggc acggcctacc tggtggccga
      721 tagcgccctg tacaacgaag agaacctgca gcagctggcc cgcacacaga gcaagtggat
      781 cacccgtgtc ccagccacct tgagcgaagc gcaagaggca ctggccgatg ctgatcccga
      841 ggcgatggaa ccgctgctgg cgggctatcg cgctcagagc cgggcgtcga cctacggcgg
      901 cgtggcgcaa cggtgggtgc tcatctactc cgagcaccgc cgccctcagg cacagcgcac
      961 agtcgagaag cagctgctca cacagagcgc agccgaagtc aaagccttca gacggttggg
     1021 ccgcaccgca tttgcctgtg aagccgatgc acagcaggca ctggccacat ttgcgcaggg
     1081 tttgcaagcg accagaatcc acgaggtgac catacagccc acgttccgct atgctaggcc
     1141 gggccggccg ggcaaagtga cggtgcctga tgcccaggtc tactacatcg aaggagcctt
     1201 gacctcgtcg ctggcggttc gtgaggccct ggtggcgcaa cacagttgtt ttattctcgc
     1261 cactaacgaa ctcgaagaac acgccttgtc cccgcaggca ctcctggcgg ggtataaagg
     1321 acagaagcat gccgagcgtg gctttcggtt tctcaaagat ccgctctttc tggcctcgtc
     1381 gctctacctc aagaagcccg aacgcatcat ggccctgttg atggtgatga cggtgtgctt
     1441 attggtctat gcggccttag agtatc
//
LOCUS       DASQSL010000065         1911 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_55445, whole genome shotgun sequence.
ACCESSION   DASQSL010000065 DASQSL010000000
VERSION     DASQSL010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1911)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1911)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1911
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55445"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            122..940
                     /locus_tag="VE844_00635"
     CDS             122..940
                     /locus_tag="VE844_00635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014705840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinoprotein dehydrogenase-associated SoxYZ-like
                     carrier"
                     /protein_id="HZB99914.1"
                     /translation="MIYSLVKTLSRPISVAVFLFLAWPIGAAEQPGVWETLLKESYFK
                     GVNILEDNAVIELEAPYRAEDPALTPLSIKAKIPQTPERYIERIHVIVDRNPQPLAGV
                     FHLTPAMGKADLAMRIRIDQYTPVRAIAVLNNGEHHMAAQFVKASGGCSAPPPAYLEA
                     AMQRLGQMRFKTVGEEVASEPTRAQFMVSHPNITGMQIDPITRSYIPEHYVKRIAISY
                     NDKPLMTAEVGFSLSADPALGFFFKPEKTGTIKAEVMDSKGLQWSQSFAVNGQL"
     gene            977..>1911
                     /locus_tag="VE844_00640"
     CDS             977..>1911
                     /locus_tag="VE844_00640"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018719526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0006106 - fumarate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006108 - malate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HZB99915.1"
                     /translation="MNAQDYRIEQDSMGEVRVPLAALYGAQTQRAVENFPISDLRLPR
                     GVIRALGLIKGAAAKANHGLGLMEGRMAEAIQAAASEVAQGEHDAHFPVDIFQTGSGT
                     SSNMNANEVIARLASQRLGSKVHPNDHVNMGQSSNDVIPTAIHVSGVLQASEDLLPAL
                     GHLAETIAERAEELKGVVKTGRTHLMDAMPLTLGQELSGWEAQVRHGQERIESALERL
                     RKLPLGGSAVGTGINAHPEFGPKVAANLTAATGIRFQRMENYFAGLSSQDAAVEMSGQ
                     LKTVAVSLMKIANDLRWMNSGPLAGLAEIHLPDLQP"
BASE COUNT          445 a          515 c          581 g          370 t
ORIGIN      
        1 gaggccctgg aaacagtcgg tgactcggaa aaagaccgat ggatattgtt tgcccaatac
       61 cacaagcgta atgtaagcaa ggcctttgtg gaattggaat gggagtagag gtgtgtgaac
      121 catgatttac tcgcttgtta aaaccctaag ccgacctatc agtgtggcgg tatttctttt
      181 cctggcctgg cccatcgggg ccgccgaaca acccggggta tgggagaccc tgctcaaaga
      241 gagctatttc aagggagtaa atatcctcga agacaacgcg gtgatcgagc ttgaagcccc
      301 ttaccgcgct gaggatccgg cactgacacc gctcagcata aaagccaaga tcccccaaac
      361 cccggagcgc tatatcgaac ggatccatgt catcgtggat agaaatccac aacccttagc
      421 cggggtgttt catttgaccc cggcgatggg caaggccgat ctcgctatgc ggatccgcat
      481 cgaccaatac acccccgtcc gggccatcgc tgtgttgaac aacggcgagc atcatatggc
      541 ggcccagttt gtcaaggcca gcggagggtg ttcggcgcct ccgccggcgt atctcgaggc
      601 ggcgatgcaa aggcttgggc agatgagatt caagaccgta ggagaggagg ttgcaagcga
      661 accgacacgc gcccagttta tggttagcca tccgaatatc accggcatgc agatcgaccc
      721 gatcacgcgc agctatatcc cggaacacta tgtgaagagg atcgccatct cctataacga
      781 caagccgttg atgaccgccg aggtaggatt ctctttaagc gccgatccag ccttgggctt
      841 cttctttaaa cccgagaaga cgggcacgat taaggccgag gtgatggatt ccaagggtct
      901 gcagtggtcc cagagctttg cggtgaatgg ccagctctga acatcttaag aaaataataa
      961 gggagtgagc gcactcatga atgcacaaga ctatcggatc gagcaggata gcatggggga
     1021 ggtgagggtg ccgctggctg cgctttatgg cgcccagacc cagcgggcgg tcgagaattt
     1081 cccgatcagc gatctcaggc taccgcgcgg tgtcatccgg gcgctcggcc ttatcaaagg
     1141 agcagccgcc aaggccaatc atgggcttgg tcttatggag ggacgcatgg ccgaggcgat
     1201 ccaagcggcc gcatcagaag tagctcaagg tgagcatgat gcgcattttc ccgtcgatat
     1261 cttccagacg ggttcgggca caagctccaa tatgaatgcc aatgaggtca tcgcccggct
     1321 tgccagtcaa cgtctcggca gcaaggtcca tcccaatgac catgtcaaca tgggccagag
     1381 cagtaacgac gtgatcccga ccgctatcca tgtgagcggc gtgttacagg ccagcgaaga
     1441 cctattgccg gcgcttgggc atctggccga gacgattgcc gagcgcgcag aggaattgaa
     1501 gggcgtggtc aaaaccggcc gcacccattt gatggatgcg atgccgctga ccttagggca
     1561 ggagctgagc ggctgggagg cgcaggtgcg gcatggacaa gagcggatcg agtctgcgct
     1621 tgaacgcctg cgtaaattgc ccctcggagg ttcggcggta ggcacaggca tcaatgcgca
     1681 tcctgagttt ggtcccaagg tggcggcgaa tctcacagcg gcgacgggga tccggtttca
     1741 acgtatggag aactattttg cgggcttgag ctcccaggat gcggctgtgg aaatgagcgg
     1801 gcagctcaag accgtagcgg tgagccttat gaagatcgcc aacgatctcc gctggatgaa
     1861 cagcggcccg ctcgcaggct tggccgagat ccatctgcct gacctgcaac c
//
LOCUS       DASQSL010000066         1088 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_82752, whole genome shotgun sequence.
ACCESSION   DASQSL010000066 DASQSL010000000
VERSION     DASQSL010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82752"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(85..576)
                     /locus_tag="VE844_00645"
     CDS             complement(85..576)
                     /locus_tag="VE844_00645"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HZB99916.1"
                     /translation="MALTKDEYRRLIGCFPTGVTIITMARGGEVRGMTANAVTSVSLD
                     PLLLLICVDKRTITHQFLEEAKAFAVNILAEDQEHVSRALASHDSEDARRLLGHPYHP
                     GQTGSPILDDCVAYIECRITEVFPGGDHSIFIGQVEWGEILREAPPLIFHRGRYGRLH
                     TSE"
     gene            complement(638..>1088)
                     /locus_tag="VE844_00650"
     CDS             complement(638..>1088)
                     /locus_tag="VE844_00650"
                     /inference="COORDINATES: protein motif:HMM:NF013488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HZB99917.1"
                     /translation="RGTYREQGWQRAARLAAPDGVVFTMWQRDDFPTWSIPALAAAKC
                     ALFQGKEAYERMHYALFEAFFTRGMNIANPEEIFTVAEECQLDMARFRADYAGGEGQK
                     LAIEEYEEAVNRFMVTAVPTLFFGQVRVVGAVPLQDYLQVLEKLGIR"
BASE COUNT          232 a          335 c          301 g          220 t
ORIGIN      
        1 atgacgcctc ccggcaagta cgcgtgctgt atggagacaa ccgaggatgg aactcttgac
       61 tgtcaagctc gacaagcgtc atggctattc ggaagtgtgc aatcgcccgt acctcccgcg
      121 atggaagatc agcggagggg cctcacggag aatctccccc cattccacct gcccaatgaa
      181 gatggagtga tctcccccgg gaaatacttc ggtaatacga cactcaatgt aggccacgca
      241 atcatccaga atcggggaac ctgtctgccc cggatggtac gggtgtccca gcagccggcg
      301 ggcgtcttcg gaatcatggc tagcgagcgc ccgtgagacg tgttcttgat cttcggccag
      361 gatattgacg gcaaacgctt tcgcttcctc gaggaactga tgcgtgatgg tgcgcttatc
      421 cacgcagatc aagagcaaca gcgggtccag agagacggag gtgactgcgt tcgccgtcat
      481 cccacggact tcaccccccc gtgccatggt gataatcgtc acccccgtcg ggaaacatcc
      541 aatgagccgt cgatattcat ccttcgtcaa cgccatatgt ctgtcctctc taagggatgt
      601 cctcccttga tgttcgagcg tccggagcgc caggggctta gcgaataccg agcttttcca
      661 ggacctggag gtagtcctgc agcggcacgg ctcccacgac acgcacttgg ccaaagaaca
      721 gcgttggcac agccgttacc atgaagcggt tgaccgcctc ttcgtactcc tcgatggcca
      781 gcttttgccc ctcaccaccc gcataatccg cccggaaacg tgccatatcg agctggcatt
      841 cttcggcgac cgtgaagatc tcttcggggt tcgcgatgtt catccccctg gtaaaaaagg
      901 cctcaaagag ggcgtaatgc atgcgttcat aggcctcttt gccctggaat aaggcgcatt
      961 tagcggctgc cagagcggga atactccagg tcgggaagtc atcccgctgc cacatggtaa
     1021 acaccactcc gtcgggggcg gccaaccgcg cggcacgctg ccagccctgt tcacgataag
     1081 tgccgcga
//
LOCUS       DASQSL010000067         1213 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_55449, whole genome shotgun sequence.
ACCESSION   DASQSL010000067 DASQSL010000000
VERSION     DASQSL010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1213
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55449"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..528)
                     /locus_tag="VE844_00655"
     CDS             complement(<1..528)
                     /locus_tag="VE844_00655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012852133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching enzyme"
                     /protein_id="HZB99918.1"
                     /translation="MELCLFDEEGDEVRVELPEVTAFCWHGYLPNIGIGQRYGFRVHG
                     PWAPEQGHLFNPSKLLLDPYAKAIEGQVSRNEAVFPYCFGAPDSSHNDADSAPYMPKS
                     VVVSPYFDWGNDRHPRTPWHETIIYETHVISLTRNHPAIPSELRGTYAGLAHPAIVEY
                     LKDLGITAVELLPVHQ"
     gene            complement(522..1213)
                     /locus_tag="VE844_00660"
                     /pseudo
     CDS             complement(522..1213)
                     /locus_tag="VE844_00660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009739638.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
BASE COUNT          260 a          333 c          368 g          252 t
ORIGIN      
        1 ttgatggacc ggaagtagct ccactgccgt tatacccagg tctttgaggt actccacgat
       61 cgctggatgg gccaacccgg cgtaggtccc ccttaactct gaggggatgg ccgggtgatt
      121 cctggtgaga ctgatgacat gggtctcata aatgatggtc tcgtgccaag gagtgcgggg
      181 atggcggtcg ttgccccaat cgaagtaggg gctgaccacc actgacttag gcatgtaagg
      241 ggcgctatcg gcgtcgttat gggaactgtc tggggcgccg aagcagtagg ggaagaccgc
      301 ctcgttccgg cttacctgcc cctcgatggc cttggcgtag gggtctaaaa gcaacttgct
      361 ggggttgaag aggtgcccct gctcgggagc ccaaggacca tggacgcgga agccgtagcg
      421 ctgcccaatc ccgatattag gcaggtagcc gtgccagcag aaggcggtta cctcaggtag
      481 ttctacacga acttcgtcac cttcttcatc aaacaggcac agttccactc cgaccacaaa
      541 ggcgggaagt tgcccacctg atagccccct tcacccacgt cccaaggctc ggcgatgagc
      601 ttggcctggt tgacgatggg gtcctgatgg atgaggtcaa agaatgctga tagacggtca
      661 acgtcgtgca actcacgggc cagggtagag gccaggtcaa agcggaagcc gtccacgtgc
      721 atctcctcca cccagtagcg caaggagtcc atgataagct ggagcacgtg ggggtggcgc
      781 atgttcaggc tgttgccagt gccagtgtag tccatgtagt agcgggggtt atcggtgacc
      841 aagcggtagt aggcggcatt gtccagtcct ttgaagcaga gcatgggccc cagatggttg
      901 ccttcagcgg tatggttgta gaccacatcc agaattacct caatatcagc ctggtgcagc
      961 agcttgacca tctgccggaa ctcctgcacc tgcaggccca actggcccac actcgagtac
     1021 tcattatgag gagcaaagta gccgatggag ttataccccc agtagttgcg caatcccttc
     1081 tccaacaggt gagcgtcatg gatgaattga tggaccggca gtagttccac tgccgttacc
     1141 cccaggttct tgaggtactc taccatcgcc ggatgggcta gcccagcata ggttcccctc
     1201 agctcagagg gga
//
LOCUS       DASQSL010000068         1818 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_165149, whole genome shotgun sequence.
ACCESSION   DASQSL010000068 DASQSL010000000
VERSION     DASQSL010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1818)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1818)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1818
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165149"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..501)
                     /locus_tag="VE844_00665"
     CDS             complement(<1..501)
                     /locus_tag="VE844_00665"
                     /inference="COORDINATES: protein motif:HMM:NF019590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NIPSNAP family protein"
                     /protein_id="HZB99919.1"
                     /translation="MIYEVRTYTLRPGTVAEFEERFAKRLPLREQHSKLGAFWHTEFG
                     PLNQVIHVYPYDDLQQRTAVRQALAQDTARQQLPGGGDLVVAQEAEIMIPAPFMHPLG
                     SRDYGSGNVYEMRTYTFAPGDIPKVLDGWGKAIEAREKYSYLAACWTSELGNLNRFTH
                     IWVYKDL"
     gene            complement(985..1248)
                     /locus_tag="VE844_00670"
     CDS             complement(985..1248)
                     /locus_tag="VE844_00670"
                     /inference="COORDINATES: protein motif:HMM:NF019540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003729 - mRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HZB99920.1"
                     /translation="MTDDLGQLVHLLRNTPVRELIAALRRDGFSLERQTRTGGRIYGH
                     PDGRLTSIHYHTGSDTLTRKTLRSVLQATRWTEDDLRRLGLLL"
     gene            complement(1245..1523)
                     /locus_tag="VE844_00675"
     CDS             complement(1245..1523)
                     /locus_tag="VE844_00675"
                     /inference="COORDINATES: protein motif:HMM:NF027249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HZB99921.1"
                     /translation="MPRHRTTPHTEVLPVKTYLFQVEFEQENDGRWSAWIETLPGCAA
                     WGYSKEEALEAIKETTQAFLEVLVEKGQRIPTAQAVETIDAPVVAVTL"
BASE COUNT          371 a          513 c          571 g          363 t
ORIGIN      
        1 caggtctttg tatacccaga tgtgggtgaa tcggttcaga ttgccgagtt cgctggtcca
       61 gcaggcggcc aggtaagagt acttctcgcg cgcctcaatg gctttgcccc aaccgtccag
      121 caccttgggg atatcgcctg gagcaaaggt ataggtgcgc atttcgtaaa cgttgccgct
      181 gccgtagtcc cggctgccca gggggtgcat aaacggcgcc gggatcatga tctcggcctc
      241 ctgggccacg accaggtccc caccgccggg gagttgctgc cgcgcggtgt cttgggccag
      301 tgcttggcgg acggccgtcc gctgctgcag gtcgtcgtag ggatagacgt ggatgacctg
      361 attgagtgga ccgaactcgg tgtgccagaa ggccccgagc ttcgagtgtt gctctcgcaa
      421 gggcagccgt ttggcaaagc gttcctcgaa ttcggccacg gtcccgggtc ggagggtata
      481 ggtccgaact tcgtagatca tgggtctgtc ctcctcatga cctcgtcgag ccaggtcaat
      541 gccgcacatg ccttccctcg gctgggctca cgtcctcgcg cacctctctc gaccaaccga
      601 aagatcaccc aaccgtgtgg acctcgggga aagcgatcga tcctcctggg tgatcatccc
      661 atcgggccat gactcggcca cgccaggaga caccgccacg gacacgggcg atgcgagggt
      721 caacagttgg gccgcaccag gcaccgggag cgacacggga gcaccggcag ggccggacgc
      781 tcgaaggcgg gggagagact ggcaggtcgt ttcagcatcg acagaggcgt gtggctggga
      841 tcgggggaga aacgacgaga cagggatgga tgggcatgag gaactcgcca agggaagagt
      901 tcgtgatgac gatgtatgac gcagccgcgt gcaaaagtcc ccgacatcca gccggggctt
      961 ttacgtgatg ccagagtata cgggtcagag gaggaggccg aggcggcgca ggtcgtcttc
     1021 agtccagcgg gtggcctgta ggacactgcg gagggtcttg cgggtgaggg tgtcgctgcc
     1081 ggtatggtag tggatgctgg tcagtcggcc gtcggggtgg ccatagatcc ggccgccggt
     1141 ccgggtctga cgttctaacg aaaaaccgtc tcgtctcaag gcggcgatga gttcccgtac
     1201 cggtgtgttg cggaggagat ggacaagctg gcccagatca tcggtcatag ggtgacggcg
     1261 acaaccggag catcaattgt ctcgaccgcc tgagccgtgg gaatgcgctg tcctttttcg
     1321 accaggacct caaggaaagc ctgcgtagtc tctttgatcg cctcaagcgc ctcttccttg
     1381 ctgtagcccc aggcagcaca gcccggaagc gtctcaatcc aagcgctcca gcgaccgtcg
     1441 ttttcctgtt cgaactcgac ctgaaagaga taggttttca ccggtaagac ctctgtatgg
     1501 ggtgtggtgc gatgtcgtgg cataaggcaa cgatatcata tcccccggcg tcgtcaagcg
     1561 ccggtggtca gattgcgcac attccaccac taaatccgat ggaatatgaa aatctctaca
     1621 ctttgtgtgg tcgtcatgtc tttcatagaa tgatcatacg tttcccggct tccccagcca
     1681 ataccacaaa tcgctaggga aagtattggc tataaacaat catatttcca ttataagcca
     1741 atgacaaacc ggctgccaaa ggcgcgcgcc cggcagggca ctagccataa actatggtta
     1801 tagccaatcc gaccacgc
//
LOCUS       DASQSL010000069         1433 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_69229, whole genome shotgun sequence.
ACCESSION   DASQSL010000069 DASQSL010000000
VERSION     DASQSL010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1433
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69229"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..98)
                     /locus_tag="VE844_00680"
                     /pseudo
     CDS             complement(1..98)
                     /locus_tag="VE844_00680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013844528.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(106..1350)
                     /locus_tag="VE844_00685"
     CDS             complement(106..1350)
                     /locus_tag="VE844_00685"
                     /inference="COORDINATES: protein motif:HMM:NF033517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HZB99922.1"
                     /translation="MRQPSTKKSGGQLGHPGTTLRQVAEPDHVLTHAPQQCASCGTAL
                     TEVAGRLAEERRQVFELPPLKLVVTEHRVILKECPHCGQENIGAFPEGVSCGASYGPG
                     VKGLLVSLNQEHLVPSERSCQIFTDWFGQPVSEGTLAAAVNFCAQELTETEAGIKQGV
                     IDSEVAHFDETGMDVEGKRGWLHTASTPQLTHYAYHPKRGSTATEDIGILPEFGGRAI
                     HDAFSTYWQYDCEHGLCNAHHLRELIFVHEQLQRAWAGDMKQVLLDIKHAVDTAKAQT
                     QTRLENDAIRGYEQRYAAVLQAGGEQENKYPPPATGRRGRKKQNKSKNLLDRLKKYQT
                     ETLAFMYDFAVPFDNNLAERDLRMIKVKQKVSGCFRTTPGARAFCRIRSYISTMKKQG
                     HNVIAALKSVFLGTPQLPVVAG"
BASE COUNT          295 a          442 c          385 g          311 t
ORIGIN      
        1 cgacgccacc gccagaaata gccataaact gtattccagt ggtcgaaatc cttgggcaac
       61 atacgccact gacagccggt cttattgaca tagaaaagta actactcagc cggctactac
      121 cggtagctga ggagttccca aaaagacact tttgagagcg gcgatcacat tatgaccttg
      181 cttcttcatg gtcgagatat aacttcggat gcggcagaag gcacgtgcac cgggggtagt
      241 acggaaacag ccgctgacct tctgcttgac ctttatcatt cgcaaatccc gctcggccag
      301 gttattgtca aagggcacgg caaagtcata cataaaagcc agtgtctcag tttgatactt
      361 cttcaggcgg tccagcagat ttttactctt gttttgcttc ttgcgtccac gccgacccgt
      421 ggccgggggc gggtatttgt tctcctgttc cccacccgcc tggaggaccg ccgcatagcg
      481 ctgttcgtac cctctaatgg cgtcgttttc caacctcgtc tgagtttgcg ccttggcggt
      541 atcgacggcg tgcttgatgt ccagcaacac ctgcttcatg tcaccggccc atgcccgctg
      601 cagctgctcg tggacgaaga tcagctcacg caggtggtgg gcgttgcaca gcccatgctc
      661 acagtcatac tgccaatagg tactgaaggc atcgtggatg gcacgtccgc caaactcagg
      721 caagatccca atgtcctcgg tcgccgtact cccccgtttg gggtggtagg cataatgggt
      781 caactggggc gtggacgcgg tatgcaacca gccgcgcttg ccctcgacat ccatccccgt
      841 ctcgtcgaag tgggccacct ccgagtcgat caccccttgc ttgatacctg cttcggtctc
      901 ggtcagttcc tgcgcgcaaa agttgacggc cgccgcgagc gtcccctccg acacaggctg
      961 gccaaaccag tctgtaaaga tctgacagct gcgctcggag ggcaccagat gctcctgatt
     1021 gagcgagacc agcaagccct tgaccccagg gccataactg gctccacagc tcaccccttc
     1081 cggaaaagcc ccgatgtttt cctgaccgca gtgcggacac tctttgagga taacgcgatg
     1141 ttcagtcaca accaacttca agggcggcag ctcgaagact tgtcgccgct cctcggccaa
     1201 gcggcctgcc acctcagtga gcgccgtccc acaggaagcg cactgctgag gcgcatgggt
     1261 gaggacgtgg tcaggctccg cgacctgtct cagcgtcgtg cctggatgac ccagctgccc
     1321 acccgatttt ttggtcgaag gctgccgcag cgaacgcgtc tgtttggccg ggccgtcact
     1381 cgacggcggc ttgctactat cagtagatca cgaaatgatg aataagtaac cac
//
LOCUS       DASQSL010000070         2091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_165162, whole genome shotgun sequence.
ACCESSION   DASQSL010000070 DASQSL010000000
VERSION     DASQSL010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2091
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165162"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(276..581)
                     /locus_tag="VE844_00690"
     CDS             complement(276..581)
                     /locus_tag="VE844_00690"
                     /inference="COORDINATES: protein motif:HMM:NF024600.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99923.1"
                     /translation="MRLSKPWISAVVLLCSSSWAMAAGESATEEPATTIPTIPDFKQV
                     DQDRNGSISPMEATEVPGLVEQFTRVDRNRDGRLNVEEYEALVPGTEEEEERHGAGT"
     gene            970..>2091
                     /locus_tag="VE844_00695"
     CDS             970..>2091
                     /locus_tag="VE844_00695"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HZB99924.1"
                     /translation="MKFFRPASISKLLFIAFSLVELPLIFALLSANVAVERLARQSQR
                     TVLEAARIVEWSRIVVHAVPAMERNARQFQLLRDPRLHEVYLKRHKEFHQSTEKLAQL
                     DLNNAQRTMLNTLIEQERAIYGTLKKATPDPAAIRLAVGHFSSLNELAQSLSLESSQT
                     IGRKLDRVQQEAAYVRQLLFWQAVTLIPVVLAFAVFGTLLVAWPIRQIEAGIRQLGQG
                     EFSSPIEVTGPQDLQELGKRLDWLRLRLLELNEQKTKFLRHVSHELKTPLAAIREGAQ
                     LLSDEAMGRLNEAQADIAEILNKNSRLLQKHIEALLSFSNVTGLPTSVLDRKPVRLDH
                     LVRTVATDQKVSLQAKHLEVHTVVSPIQINGDAQKLRVVL"
BASE COUNT          462 a          605 c          568 g          456 t
ORIGIN      
        1 agggactagg tggggccggc gccggcgtgg cgctctcgcc cgagggtgcg gttggcgtgc
       61 cgggcttgcc tgcatcttcg caaccggcca tcagcagcat agcaaacgta aggattggga
      121 tcagaagtcg attcatattt acctcttttc acatatctgg ttaaagtggt ttagggtcat
      181 aatatcatgg cacgcctcgc ctgggaatca gaagcggtat ccccaaggcg gggcggtccc
      241 cagacggcta tcctgccctc acatcgggac ctggtttagg ttcctgctcc atggcgctcc
      301 tcttcttctt cggtaccagg aaccagcgcc tcatattcct ccacattcaa gcggccatcg
      361 cgattacggt ccacccgggt gaactgctcc actagacccg ggacttcagt cgcctccatt
      421 ggactgatgg acccatttcg gtcctgatcc acctgtttga agtcagggat cgtcgggatc
      481 gtcgttgccg gctcctctgt tgccgactcc ccggccgcca tcgcccagct tgaactgcac
      541 aataatacta cagcagagat ccaaggtttg cttaatctca tggtgatctc cttaatttta
      601 tcaagatttt tacattttta cgaaaaccca cgggcttctt cacccgtttg gcaccaagct
      661 cttcaagccg tgtgccagat gtatgtttcc gtcgattttt actgtatatt caaaaactta
      721 gaagaaccgc tcggaaagga aacggcacgg cgcagcgatc gcactgtggc ccgacggcca
      781 caggctgggc actcggatcc agtaactcgc tgatctgtcg agatacgttc accgtatcca
      841 aacagacaca cccagtggct gtgccgcgcg gggtcctgcg cgttagtaag gaggggtggc
      901 tgcgaagcag ccggggtggt taatataggt ggcaacttgg gttaaataaa taaagcagtc
      961 actgtaaccg tgaagttctt ccgccccgcc tccatttcaa agctactctt catcgctttc
     1021 tcgctggtgg agttgcctct catcttcgcg ttgctcagcg ccaacgtagc cgtggaacgt
     1081 ctcgccaggc agagtcagcg gacggtgctg gaagcagccc gcatcgtcga gtggagccgg
     1141 atcgtggttc acgcggtccc agcgatggag cgcaacgccc gacagttcca gctgctcagg
     1201 gatccccgcc ttcatgaggt atatctaaag cggcacaagg aatttcatca gtccacggaa
     1261 aagctagcgc agctggatct gaataatgct caacgcacta tgctcaatac gctgatagag
     1321 caggaacgcg caatatacgg gaccctgaaa aaagcgacgc cagatcccgc tgcaatccgg
     1381 cttgcggtag gccacttctc ctctctcaat gaactggccc agtccctttc tctggagagc
     1441 agccagacta ttgggcgtaa gctggatcgt gtgcagcagg aggctgctta cgtgcgacag
     1501 cttctgttct ggcaggcagt gacgctgatc ccggtggtgc tggcatttgc ggtctttggc
     1561 acccttctgg tagcatggcc aattcgacag atcgaagccg gtatccgcca gctgggccaa
     1621 ggcgagttct cctcacccat cgaggtaacc gggccgcagg acctccaaga actggggaaa
     1681 cgcttggact ggttgcgtct acgcctgctc gaactcaacg agcagaagac caagttcctg
     1741 cgccatgtat ctcacgaact caagactccc ctcgccgcca ttcgtgaggg tgcccaacta
     1801 ttgagcgatg aagcgatggg gaggctcaat gaggcgcaag ccgacatcgc tgagatccta
     1861 aacaagaaca gcaggctgct gcaaaaacac atcgaagcct tgctgagttt tagcaacgta
     1921 acagggctac cgacatccgt gctggatagg aagccggtgc gcctcgatca cctggttaga
     1981 acggtggcca ccgatcaaaa ggtatccctg caagccaagc acctagaggt ccatacagta
     2041 gtgtccccga tccagatcaa cggcgacgcc cagaagctcc gagtggttct g
//
LOCUS       DASQSL010000071         1525 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_151686, whole genome shotgun sequence.
ACCESSION   DASQSL010000071 DASQSL010000000
VERSION     DASQSL010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1525
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151686"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..782)
                     /locus_tag="VE844_00700"
     CDS             complement(<1..782)
                     /locus_tag="VE844_00700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002635470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HZB99925.1"
                     /translation="MARWNKPTIFAAAGGLGLLLAARAVIRRWREDDLRNQVALITGG
                     SRGLGLIMARQLLRQGAYVAICARDEPELERARHDLNQDHGQVLSVPCDVTNREQVHA
                     MVQGVLRHFGRIDILINNAGAIQVGPVELMTLDDYEAAMKVHFWGPLYTTLAVLPGMR
                     QRRRGRIVNIASIGGKISMPHLLPYNASKFALVGFSEGLRAELAKDGILVTTVCPGLM
                     RTGSPRNALFKGQHRAEYAWFSISDALPIVSQSAERAARQIIA"
     gene            complement(1104..1346)
                     /locus_tag="VE844_00705"
     CDS             complement(1104..1346)
                     /locus_tag="VE844_00705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99926.1"
                     /translation="MLDILHSQVIGVKRYLIDYRCTGARGYPGNLSGPTEVDDTPAAK
                     ADPMPFPTTCLSSHSGDVKACQAPADTPLTSQNETG"
     gene            1348..1420
                     /locus_tag="VE844_00710"
     tRNA            1348..1420
                     /locus_tag="VE844_00710"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1381..1383,aa:Val,seq:tac)
BASE COUNT          310 a          445 c          438 g          332 t
ORIGIN      
        1 gcgatgatct gacgcgccgc ccgctctgca ctctgggaga cgataggcaa ggcatcgctg
       61 atgctgaacc aggcatactc cgcccgatgc tgtcctttga aaagcgcgtt gcgcggacta
      121 cctgtccgca ttaagccagg gcacacagta gtcactagga tgccgtcctt ggctaactct
      181 gcccgcaacc cctcggagaa tccgaccagc gcgaatttgc tggcattata tggtaggagg
      241 tgcggcatgc ttatcttgcc accgatggaa gcgatattga caatgcgccc ccgccgccgc
      301 tgacgcatgc caggcaacac cgccaaggtc gtatacagtg ggccccagaa atgcaccttc
      361 atggccgctt catagtcgtc aagcgtcatc agctcgaccg ggccgacttg aatcgccccc
      421 gcattgttta tgaggatgtc gatccggcca aaatgcctca gaacgccctg gaccatggcg
      481 tgcacctgct cccgattggt gacatcgcac ggcacgctca ggacctgccc gtgatcctgg
      541 ttaagatcat ggcgagcgcg ttccaattcc ggctcatcgc gggcacaaat cgcgacatag
      601 gctccttgcc gcaagagttg gcgcgccatg atcaacccca atccacgcga gccacccgtg
      661 atcagggcga cttggttccg taagtcgtct tctcgccacc tgcgtatcac tgcgcgtgcc
      721 gccaaaagga ggcctaatcc gccagcggca gcgaaaatgg tgggcttatt ccaacgagcc
      781 ataacgttcc cttcctatcc aggtgagacc ttccacgtga gccgccaggt aatgggtgat
      841 gggaattttg ggggctggta acgggaagat cagctggcga aatttcttgg ggtgtatccg
      901 tcaagtcgcc aatacattcc gaaggggcaa gttctatgcc gaagcatgac agatccgctg
      961 tttccgggtt cgctcagccc aggcgtgacc gcccttagat aagccgtcga ggtgcttatg
     1021 agtcctcaag acatcgaccg taagcctacc tagctcgtcg gatagcgctg tcaacgcgtt
     1081 gtcaaattga tatgaaggct gcctcaccct gtttcattct gagaggttaa cggcgtatcg
     1141 gctggggctt ggcatgcctt gacatcgccg gagtggctgc tgaggcaggt ggtgggaaat
     1201 ggcatcggat cagccttggc cgctggtgta tcgtctacct cggtgggccc tgaaaggtta
     1261 cccggatatc cacgggcacc ggtgcaccga taatcgatca aatagcgctt gacgcctatc
     1321 acctgactgt gtagtatgtc cagcatcggg cgggtagctc agctggaaga gcgctggcct
     1381 tacaagccgg aggtcacagg ttcaagtcct gttccgccta cctcgatggc tgtgtcactt
     1441 cacgctttgg ctaggatggc gctgccgtca agatgagctc tggtgacagc aggctcatcg
     1501 tttttgctct gcggggctgt agttc
//
LOCUS       DASQSL010000072         1207 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_41777, whole genome shotgun sequence.
ACCESSION   DASQSL010000072 DASQSL010000000
VERSION     DASQSL010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41777"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            315..875
                     /locus_tag="VE844_00715"
     CDS             315..875
                     /locus_tag="VE844_00715"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZB99927.1"
                     /translation="MYGQVEYLIVMQEGAKARLTAEGNDRVDNLSNRTAEKDVVRAHR
                     RSSEMDEQRVPNLQEMDEQQAERFLTELLSNHDPQEEYDVRHPDDYVMEMPQSGERFR
                     GRENMREFQEAHPTPPSSLRLRRVLVKEGLWVAEAVIDYGNGQVLDVVLILELRDGKM
                     WRDRWYFAEPFEAPEWRAQWVERMES"
BASE COUNT          290 a          327 c          352 g          238 t
ORIGIN      
        1 acggaagata cgttgatagg agtcccatgt atgtatcgca ggacacaaaa gtgcagcata
       61 tacccacaga atttcaagct aggagaccta agaaccctgt ggacagtgca agggggttgg
      121 tggcctctat ccacgagctg ccgagagcac ttcttagcgg caactcgtga ataaaggcac
      181 cggcccctat agactcctgt aggccagaag tcctacgtaa gaaatggacc tttggctgtt
      241 gcgctttccc tctattgctg acacgttcta ggtgtaaagc aacctgctcc cgtcgcacgc
      301 gaaggagatc caagatgtac ggccaggtag agtacctaat cgttatgcaa gagggcgcga
      361 aggcgcgcct gacggcggaa ggaaacgacc gcgtggataa tcttagcaac cgcaccgccg
      421 agaaggacgt agttcgcgcc cacaggagga gcagcgagat ggacgagcaa cgggtgccca
      481 acctccaaga gatggacgag caacaggcag agcgcttcct caccgagctg ttatccaatc
      541 acgaccccca agaggaatac gacgtgcgcc acccagacga ctacgtgatg gagatgcccc
      601 agtcgggcga gcgcttccgg ggccgggaga acatgcggga gttccaggag gcccacccca
      661 ccccgccgtc gtctctccgg ctgcgccgag tgctggtcaa ggagggactg tgggttgccg
      721 aggcggtcat cgactacggc aatggtcagg tcctcgacgt ggtgctgatc ctcgagctgc
      781 gcgacgggaa gatgtggcga gacagatggt actttgcgga gccgtttgag gcgccggagt
      841 ggcgggcgca gtgggttgag aggatggaat cctaaggctc cacaggttta cctgaccttt
      901 tcgagaatcc cttacaccgg aagcccagtt tccgagaata aaggctctag aaactgtttg
      961 gtaaatcggg gttaggtctc aaatcgaggc cccacaggtt gccaagagag ggcaaaaaag
     1021 tcctatttgg ccctcttagg cctccaatat ctacccttac aaaggcctcc agctaattac
     1081 caaacagttt ctctcggcag ctcgtggata gaggccacca acccccttgc actgtccaca
     1141 gggttcttag gtctcctagc ttgaaattct gtgggtatat gctgcacttt tgtgtcctgc
     1201 gatacat
//
LOCUS       DASQSL010000073         1213 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_124194, whole genome shotgun sequence.
ACCESSION   DASQSL010000073 DASQSL010000000
VERSION     DASQSL010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1213
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124194"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..664)
                     /locus_tag="VE844_00720"
     CDS             complement(<1..664)
                     /locus_tag="VE844_00720"
                     /inference="COORDINATES: protein motif:HMM:NF013482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HZB99928.1"
                     /translation="MTTRVFGSGIRRREDPRLITGQATHSDDTKLTGMVHAAILHSPH
                     AHTRIRSIGTSAAQSAPGVLAVYTGVDTDVVLNPIPCAWIPPNSDVKAVPYPAIARDV
                     ARYVGDAVAVVVAETRYQAEDALELINVDYEPLPAVVNPEEAMQDGAPQLHQDAPNNQ
                     AFHWVATGGDVDQAFQEAEIVVRDTIVQQNLIPNAIEPRSAIASYLSANGELTLWNTT
                     QNP"
     gene            complement(668..943)
                     /locus_tag="VE844_00725"
                     /pseudo
     CDS             complement(668..943)
                     /locus_tag="VE844_00725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012715913.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
BASE COUNT          248 a          344 c          348 g          273 t
ORIGIN      
        1 ggggattctg ggtggtgttc cacagggtca actccccatt ggcggacaga tagctggcaa
       61 tggcggatcg gggttctatc gcattaggaa tgaggttttg ctggacaata gtatcccgga
      121 ctactatctc tgcttcctgg aatgcctggt ctacatcacc cccggtagcg acccagtgga
      181 aagcctggtt attgggagca tcttggtgga gctgtggcgc gccgtcctgc atcgcttctt
      241 cagggttaac tactgccggg agtggttcgt agtcaacatt tataagctcc agggcgtctt
      301 cggcctggta gcgggtttcg gcgaccacta cggctacggc atcgcccacg taccgcgcca
      361 catccctggc tatcgccggg tacggtactg ccttaacgtc agagttgggg ggtatccagg
      421 cgcaggggat agggttgagg acaacatcgg tatcgacacc ggtatagacg gccagcaccc
      481 caggggcgga ctgagcggcg ctggtgccga tgcttctgat gcgggtgtga gcgtgggggc
      541 tgtgcagtat ggcggcgtga accatcccgg tcagtttagt atcgtcggag tgagtggcct
      601 gaccggtaat cagccggggg tcttccctcc ttcggattcc agaaccaaaa actctagtag
      661 tcatggccta acctcccatg acttcagcag cggcccgggc tgctttcaca atgttctggt
      721 atccggtgca gcagcagata ttgccttcca ggccgtcccg gatttcctgg ttggtgggtt
      781 tggagttgcg ctggagcagt tccaccaccg tcataatcat accggaagtg cagtagccgc
      841 actgaaggcc gtgattgttc cagaatgctt cctggacggc ctgcaggtta ccatcctgga
      901 ccagcccttc aatggtggtg aggttggccc cgttggcctg tactctggaa tttcccagat
      961 caaactgatt cccctgaaaa tgtgagcctc caggatggcg cgaactataa aacggcatcc
     1021 cgataatgtc aactaccatg cgattcgctc aagtgcccca ctctcatggc ggaaccacct
     1081 ccctgacaag cgtaaaagcc cagaatcgcc tgctcctacc caagcgcctt cttcggtcaa
     1141 cccattggca gcggacgacc ctgtaacacc gtcaccaata cccatactcc caaacagaaa
     1201 ccagaggatt gga
//
LOCUS       DASQSL010000074         3868 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_192630, whole genome shotgun sequence.
ACCESSION   DASQSL010000074 DASQSL010000000
VERSION     DASQSL010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3868
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192630"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..224
                     /locus_tag="VE844_00730"
     CDS             <1..224
                     /locus_tag="VE844_00730"
                     /inference="COORDINATES: protein motif:HMM:NF014171.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TrkA C-terminal domain-containing protein"
                     /protein_id="HZB99929.1"
                     /translation="VGKSIKEANLRAQIGASVIALLHHGHVIPNPKSDTRFEAGDMVG
                     VIGTVQELVQPGANNISVRRTAVGAHRSI"
     gene            complement(187..870)
                     /locus_tag="VE844_00735"
     CDS             complement(187..870)
                     /locus_tag="VE844_00735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007043256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZB99930.1"
                     /translation="MTAITELYLEAQSLLEAGERVMSTDEMTGIQALERKHPTIPMGP
                     GRVERREFEYKRHGTVTLIANFDVAQGKVIAPPMGPTRNEADFVTHIKQTVACAPEAT
                     RWHFVTDNLNTHQSESLVRFVAAHDGIEADLGEKGKRGILKSMATRAAFLADATHGIV
                     FHYTPKHTSWMNQIEMWFSILMRKLIKRASFTSVEDLEAKVLAFIAYFNETMAKPFKW
                     TYGRQPLCA"
     gene            complement(896..1384)
                     /locus_tag="VE844_00740"
     CDS             complement(896..1384)
                     /locus_tag="VE844_00740"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZB99931.1"
                     /translation="MPGPTAPKIVLCEQERQDLLMLIRAHKTPQHLSFRAQIILRLAA
                     GHDTSEVAKHFETTRLTVRRWRQHWLGRPHASAKERLQDAPRPGTPGTFSAEQWCQIM
                     ALACEPPAASGRPISQWTPRELADEAIKRGMVETISERHVGRFLKSGRAQTASKPLWA
                     QL"
     gene            complement(1533..3182)
                     /locus_tag="VE844_00745"
     CDS             complement(1533..3182)
                     /locus_tag="VE844_00745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99932.1"
                     /translation="MSQYSKMKQSREQWKAKAIERGQAERYQRKQSARHKARAAQKTK
                     ALEAAEARIGELEAHLRDLTIRPKVDVVHLALQLFLEARIGFRAVSRVLTLLALALGI
                     KKAPCPQTVINWVMRLSIVRIDSARHLRGLPLSQAPFGNGMIWMIDLSIGLGTGKILA
                     VLACDAHHHQRNRGALSLAQVHCIGVSVATSWTGEAIVAVLKRLIAVMGRPAAYLKDR
                     GSELYKAVDLLALEGLASACLDDISHAAASMLKRTYQHHPDFEMFLSACGRVSSNFKQ
                     TILACLAPPNVRTKARFMNVHRLFTWADRVLKLSPTGGAKAGSILARLRANLDRLPQC
                     KALIKRFRADAKGLMGCEQILKTKGLTPATLAACEPLIDTMASAAVRQEFRAYLDVQL
                     ETAKELGFDQVGLPISSDSIESLFGVAKQHGVGETQDAARIALRLPALCGAPTREEAR
                     QVLEGSVARQQAVSDQFVSLTKQRREVLGHPERLESLSEDQGEAQMELIPRPKSRLNH
                     EPILNLSMDCENRYGPQLVAEDDLALLENTGPPEIREVALS"
     gene            3375..3680
                     /locus_tag="VE844_00750"
     CDS             3375..3680
                     /locus_tag="VE844_00750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99933.1"
                     /translation="MTYNRMEAKPIQGEHCRFCGDAKAPLVKTPCCEQWICCDTAFLS
                     FQGGGRCQVEHERFSMCYSHYQDQHGGPWESCQKCRDYWSPRDYQFYAENPINWPRY"
BASE COUNT          833 a         1063 c         1116 g          856 t
ORIGIN      
        1 ttgtgggcaa gagcattaag gaggcaaacc taagagccca gatcggtgca tctgtgattg
       61 ccctgctgca ccatggacat gtcattccaa acccgaaatc ggacacgcgt tttgaagccg
      121 gtgacatggt gggtgtgatc ggcacggtgc aggaactagt acagcctggc gcaaataaca
      181 tctcagttag gcgcacagcg gttggcgccc ataggtccat ttaaacggct tagccatcgt
      241 ctcattaaaa taggcgatga aggccaatac cttcgcctcc aaatcctcaa ccgaggtgaa
      301 actggcccgt ttgatcaatt tgcgcatcaa gatactgaac cacatttcaa tctgattcat
      361 ccaggaggta tgtttggggg tgtagtgaaa gacgattcca tgggtcgcat cagcaaggaa
      421 tgcggcccgc gtcgccatcg atttgagaat cccgcgcttg cccttttcgc ccaagtccgc
      481 ctctataccg tcatgggctg ccacaaaccg taccaggctt tcggattgat gggtattgag
      541 attatcggtg acaaaatgcc accgcgtggc ttctggggca caggccaccg tctgcttaat
      601 atgagtgaca aagtctgctt cattgcgcgt tggccccatc gggggggcga tgaccttgcc
      661 ctgagcgaca tcaaaattgg cgattaaggt cacggtgcca tgacgtttgt attcgaattc
      721 gcgacgctcc actcggcccg gtcccattgg gatcgtggga tgtttacgct ccaaggcttg
      781 gatgccggtc atctcgtcgg tcgacatcac acgttcgcct gcttccaaaa gcgactgggc
      841 ctccaggtag agctcggtga tagccgtcat tttcgcgtcg gcggccgcat cgggctcaga
      901 gttgagccca tagcggcttc gatgcggttt gagcgcgacc tgattttaaa aaacgaccca
      961 cgtggcgctc ggaaatggtt tcgaccatgc cacgcttgat ggcttcgtcg gcaagctcgc
     1021 gcggcgtcca ttgactgatc ggccgacctg atgccgcagg gggttcgcag gccagggcca
     1081 tgatttgaca ccattgttcg gcactaaagg tgcccggggt ccccggacgg ggcgcgtctt
     1141 gtaagcgctc tttcgccgat gcatgggggc gccccagcca atgctggcgc catcgtctca
     1201 cggtaaggcg agtcgtttcg aaatgcttag ccacctcgct ggtatcgtgg ccagcagcca
     1261 gccgtaagat gatttgggca cgaaagctga ggtgttgagg cgttttgtgg gcacggatca
     1321 gcatgagcaa gtcctggcgc tcctgttcgc acaggacaat cttgggcgca gttgggccgg
     1381 gcatatgagg ctcccatgga ttcgggtgac acggatcgga tcgctgagat tctatacgaa
     1441 gtcggcccaa agctaaatgg ttagatattt ctgccaggct gtactagggt gtccaaatcg
     1501 gctttgagct gtggaccaac ttttggtatt cctcatgaca aagcaacttc tctgatctcc
     1561 ggtggccccg tattttcaag gagagccagg tcatcctcgg ccaccaactg aggcccatat
     1621 cgattctcac aatccattga gagattgagg attggctcat gatttagccg acttttggga
     1681 cgtggtatca actccatttg agcctcacct tgatcctcgc tcagactctc gagacgctcg
     1741 gggtggccca acacctcgcg tcgctgcttg gtcaaggaga caaactgatc gctcaccgct
     1801 tgctgtctgg ccacactccc ctcaagcacc tgcctggctt cctcacgagt cggcgccccg
     1861 cacaacgcgg gcaagcgaag cgcgattcga gccgcatcct gcgtttcccc caccccatgt
     1921 tgtttggcca ctccgaaaag cgattcgatg ctgtctgagc tgatcggcaa gcccacctga
     1981 tcgaaaccca gctccttcgc cgtttccagt tggacgtcca aataggctcg aaactcctgg
     2041 cgcaccgcag cggaggccat cgtgtcaatc agcggctcac acgcggctag ggttgcaggt
     2101 gtgagccctt tggttttgag aatttgctcg caccccatca accctttcgc atcggcccga
     2161 aagcgtttga tgagggcttt gcactgcggt aagcgatcga ggttggcgcg aagacgggct
     2221 aaaatcgaac cggctttggc cccgccagtc ggtgagagct tgagcacccg atcggcccag
     2281 gtgaataggc ggtggacatt cataaagcga gccttggtgc gcacgttggg cggggccaaa
     2341 caggccagaa tagtttgctt gaagttgctc gagacccgac cacaggccga caagaacatc
     2401 tcaaaatcgg ggtgatgctg gtaggtgcgc ttgagcatcg aggccgccgc gtgggagata
     2461 tcgtcgaggc aagcgctcgc cagaccctct agagccagca agtccaccgc tttatagagt
     2521 tcactgccgc gatctttgag ataagcggca ggacggccca tcacggcgat gaggcgtttg
     2581 agaaccgcca cgattgcctc gccagtccaa ctcgtggcca cgctgacccc aatgcaatgg
     2641 acctgggcta aggagagggc accccggttg cgttgatgat gatgggcatc gcaggccaag
     2701 acagctaaaa tcttccccgt gcccaggcct atactgagat cgatcatcca gatcatgccg
     2761 ttgccaaagg gcgcctggct cagcggcaag ccgcgaaggt gacgggccga gtcgatgcgc
     2821 acgatcgaga gccgcatcac ccaattgatc acggtttgag ggcacggtgc cttcttgatg
     2881 cccagggcca atgccagtag agtcaggacc cgagagacgg ctcgaaagcc aatgcgagct
     2941 tctaaaaaca gttgcagagc caagtggacc acatcgacct tgggccggat cgtgaggtcg
     3001 cgaaggtggg cctcaagttc gccaatgcgg gcctcggccg cttcgagggc tttggttttc
     3061 tgtgcggctc tggccttgtg gcgggcgctc tgtttgcgct gatagcgttc tgcctggccg
     3121 cgctcgatgg ccttggcttt ccactgctct cggctctgtt tcattttgga gtattggctc
     3181 acaaccgatt ctcagatgaa ctcgctgacc tgaggccaaa cgatgggatg gcatcgaaag
     3241 gcgaattcgc tcacctctag agcatagagc gatcggaggg atcatgcacg gctctgggct
     3301 caacctcagg gccacgaggc taccatcttg atgtcaaagg aggctaccat cttgatgtca
     3361 aacaaggaga cctgatgact tacaaccgca tggaagccaa gccgattcag ggcgagcact
     3421 gtcgattttg tggcgatgcc aaggcgccgt tagtgaaaac gccatgttgt gagcagtgga
     3481 tatgttgtga tacagcgttt ttgtcgtttc aaggtggcgg tcgatgtcag gtggaacacg
     3541 agcgctttag catgtgctac tcccattatc aggatcagca tggagggcct tgggagagtt
     3601 gtcagaaatg ccgcgattac tggtcacccc gggattacca attctatgcc gagaacccga
     3661 tcaattggcc caggtattga agtctacgag aggctcatga ggcccaaatc ccgggcacga
     3721 aaattgccct ctggatggca tttttggaca ccctacacgt atacgaggga taacgcgatg
     3781 aacactgagc taccgtttca tcgggccaaa atcctcattg tggatgatga acccttgacg
     3841 gtgcaattgc tcgaaaatat gttgcata
//
LOCUS       DASQSL010000075         1200 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_27724, whole genome shotgun sequence.
ACCESSION   DASQSL010000075 DASQSL010000000
VERSION     DASQSL010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1200
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27724"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..598)
                     /locus_tag="VE844_00755"
     CDS             complement(<1..598)
                     /locus_tag="VE844_00755"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZB99934.1"
                     /translation="MAHILIVDDERHTLDALGVILRREGHTALTATSGTEALKHLDEQ
                     DVDIVLSDVKMPAMDGLSLLRQIKSEYTGVVVVMMSGHQDVNSAVEAMKEGAFDYLVK
                     PFGKEDVIRTIQKALAHQALLVENLTLKRQVSDRFARAQVIGSSPHWRKICDMVEQVA
                     PAKATVLITGESGTGKELIASLLHRLSPRGDRPFITLNA"
     gene            complement(803..>1200)
                     /locus_tag="VE844_00760"
     CDS             complement(803..>1200)
                     /locus_tag="VE844_00760"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZB99935.1"
                     /translation="AHGISLHTEGLEDLGEIVLHKSTLQRALLNMVQHVIEATPPGEH
                     LTLRGWRTASHVHLTIHHSGKNLKANALPRPLRLSKATAVEPAHLRLYVAQEIVTAHG
                     GVFGASSAPDEGMTLTMILPIGGPGENML"
BASE COUNT          228 a          360 c          354 g          258 t
ORIGIN      
        1 cggcgttgag tgtgatgaat ggccggtcac cacgcgggct caggcggtgc aacaggctgg
       61 cgatgagctc tttgccggtg ccactttccc cggtaatcag gaccgtggcc ttggcgggag
      121 cgacctgctc caccatgtca cagatcttgc gccagtgggg gctggagccg atcacctggg
      181 cgcgagcgaa ccggtcagag acttggcgtt tgagcgtcaa gttctccacc aggagggctt
      241 ggtgggccag cgctttctga atcgtgcgaa tgacatcctc tttaccgaac ggcttgacca
      301 gataatcgaa tgccccctct ttcatcgctt ccacggccga attcacgtct tggtgcccgg
      361 acatcatcac caccaccaca cccgtatact cagatttgat ctggcgcagg agggacaggc
      421 catccatcgc cggcatcttc acatcgctca agacaatgtc tacatcttgt tcatcgagat
      481 gcttgagcgc ttccgtcccc gaggtcgcgg tcagcgccgt atgtccctcg cgccggagga
      541 tgacgcccaa ggcgtcaagc gtgtgacgtt cgtcatcgac aatcagaatg tgcgccatag
      601 atattcgccc tcttcctcgg cataactcat tcgtgaggca actgaggagg tattgccaag
      661 accagtgaaa gattgccccc ttgccaaaga aggtgaaggt acccctggtg gttgatctgc
      721 agcgcgatgg ttctctctcc cctggtagcc aaggcaaacg atgccgaacg gctgatctgt
      781 gaggccgacg cttgggtgcc tcctagagca tattctctcc aggccccccg atcggcagta
      841 tcatggtcaa tgtcatgcct tcatcgggtg cactggaggc tccgaatact ccaccgtggg
      901 cggtgacgat ctcttgtgcg acgtagagcc gcagatgagc cggttcgact gccgtcgcct
      961 tcgagagcct gagcggccgc ggcagcgcat tcgccttcag gttcttcccg ctatgatgga
     1021 tggtcaagtg gacgtgcgac gcagtccgcc agccgcgcaa cgtgagatgc tcacccggcg
     1081 gcgtcgcctc gataacgtgc tgcaccatgt tcagaagggc gcgctgcagg gtcgacttgt
     1141 gaaggacgat ttctcccaga tcttcaaggc cttccgtgtg gagggagatg ccatgggcct
//
LOCUS       DASQSL010000076         3904 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_165181, whole genome shotgun sequence.
ACCESSION   DASQSL010000076 DASQSL010000000
VERSION     DASQSL010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3904
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165181"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            730..1935
                     /locus_tag="VE844_00765"
     CDS             730..1935
                     /locus_tag="VE844_00765"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002683517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HZB99936.1"
                     /translation="MAMMKMEELQLTGKRVLIREDFNVPIKNGRVTDDTRIVAALPTI
                     RQALAAQARVILVSHLGRPVEGQYDEALSLAPVAVRLSELLGRKVPLIKDWIQGVTVG
                     EGELVLCENVRFEVGEKNNNHELARNMAALCDIYVNDAFATAHRAEASTHCIAKYAPR
                     VCAGPLLVAEIEALGRALREPARPLVAIVGGAKVSTKLKILELLAQKVDQLIVGGGIL
                     NTFLKAEGYPIGRSLYEEDLVELARGLLASTRDRGADIPLASDVVCANECSEQAQATI
                     KDIGEVSADDMILDIGPQTAAHFAELLDRAATIVWNGPLGVFEFEPFGSGTRMIAEAI
                     AQSQAFSIAGGGDTLAAIAKYGITDRISYVSTGGGAFLEYLEGKDLPAVAILEERARA
                     QRLHPSEGY"
     gene            1960..3402
                     /gene="pyk"
                     /locus_tag="VE844_00770"
     CDS             1960..3402
                     /gene="pyk"
                     /locus_tag="VE844_00770"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018953755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HZB99937.1"
                     /translation="MRRTKIVATLGPATDKLEVLDSLLTAGVDVVRINYSHGSLESHT
                     KRIEQLRERAKARDLQIGVIADLQGPKIRIERFRQGPILLREGEHFTLDTELGRDEGD
                     EYQVGVTYKDLLRDVTPGDILLVDDGRIVLKVEGITSHRVECKVLMGGPLSNNKGLNR
                     EGGGLSARALTQKDEKDIHHAVEYGADYVAVSFPRNGDDIKEARRWIEKANGKAGVIA
                     KIERAEALSNSKEILKEADGIMIARGDLGVEIGDAALPAVQKRLIKLARDMNRVVITA
                     TQMMESMIQHPIPTRAEVFDVANAVLDGTDAVMLSAETSVGRYPKKAVEAMARICLKT
                     EIESGAKGADYRLDAQFGRIDEAIAMATMYAANHINARAIVALTETGSTCMWMSRVRS
                     GIPIFAFTRRPETLRKVTLYGGVYPIPFDVTHTDFLQTNREMIDILLARGAVAEGDNI
                     IITKGDLRGIAGGTNGMKIVRVGQLIDDTA"
     gene            complement(3406..>3904)
                     /locus_tag="VE844_00775"
     CDS             complement(3406..>3904)
                     /locus_tag="VE844_00775"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HZB99938.1"
                     /translation="GLPRLRIAVPVSTRQLRYGDLPAAIFRILAETGLEPPCLELELA
                     ESSLIIDPAHAAEVLTRLHAMGVQLALDDFGTGYSSLVYLKRFPFRRVRIAGSLVRDL
                     PQDPAMVQAILALARQFGMKVVAKGVETEEQRALLQAYACDEVQGLRFSPPVTAEAVP
                     PLFGK"
BASE COUNT          868 a         1103 c         1139 g          794 t
ORIGIN      
        1 ggcacattcg acgagcccgt cgtcgacatc gcgatcccgc tgaaccagta gttcgctcca
       61 gactgggctc aggttacttg cccgacctgc gagtcgggcg agcggctcgt cggcaacggt
      121 ttctcataga ccctaacgct ctcgggtttt ctgtcgctac tctcacactt ggagtttcac
      181 cgtgattgac actcagcctt ggtccatacc ctagcagaca tcatgggcag ggacgcacat
      241 acagctggtc aatccggcaa attctacgtt tctcagggtg ccgtttgcta ccggttttac
      301 ggctgccgca aacggtttgt accaccctcc acgtgcatta cgtcggggcc ccccgcccct
      361 agaccttaaa aggtatacct atcttaaccc aaagccccac gggattgctg cgaaccatgt
      421 cacagtttgc gaatttcacg gtgaaacaaa ttgatttaat tgcgcagggg tgacttcccg
      481 cgaagtgtcg caatccactg gcgggtcttc ggctcctgcc tcattcgatg ggctgaacgg
      541 cagtaaagcc catcgtcttt tatcggcccc ttatcgcccc tggtagagga tcggggtaag
      601 gtagtagtat agaggggcaa tcaataacaa aataaaatga agaagcaacc gaagcattca
      661 accctcactc taaccctccc tctaccgggg agagaatgga ggggtaggtg aggaaaagcg
      721 gagggaacta tggccatgat gaagatggag gaacttcagc ttaccggcaa gcgagtgttg
      781 attcgagagg atttcaatgt cccgatcaaa aacggccgtg tcactgacga cacgcgtatc
      841 gtcgctgccc ttcccacgat tcgacaggcg ctcgccgccc aagcccgggt catactggtc
      901 tcccatctcg ggcgaccggt agaaggccaa tacgatgagg cgctttcatt ggccccggtg
      961 gctgtgcgtc tatccgaact gctcggccga aaggtgcctc tgatcaagga ttggatccag
     1021 ggggtaactg tgggcgaggg cgagcttgtg ttgtgcgaga acgtgcgctt tgaggtgggt
     1081 gaaaaaaaca ataaccatga gcttgcccgg aatatggcgg ctctgtgcga catctatgtc
     1141 aacgacgcct ttgccaccgc ccatcgggcg gaagcctcta cccactgcat cgccaaatac
     1201 gcgcccaggg tgtgcgcagg tcccttgctg gtggcggaaa tcgaggcatt ggggcgggcc
     1261 ttgcgagagc ccgcgcggcc gctggttgcg atcgttggag gcgccaaggt ctcgactaag
     1321 ctcaagatct tagaattact cgcccaaaag gtggatcagc tgattgtcgg gggcgggatc
     1381 ttgaatacct tcctcaaagc ggagggctat ccgattggca gatcgcttta cgaggaggat
     1441 ttggtggagc tcgcccgggg tcttttggca tcgacccgcg accgcggcgc tgatattccc
     1501 ttggccagcg acgtcgtctg cgccaacgaa tgctccgagc aagctcaagc cacgatcaag
     1561 gatatcggtg aggtttccgc cgatgatatg atcttggata tcggacctca aaccgccgcc
     1621 cactttgccg agctgctcga tcgcgcggcc acgattgtct ggaatggtcc actgggggta
     1681 tttgaattcg agccgttcgg atccggcacc cggatgatcg cagaagccat tgcccaaagc
     1741 caagccttct cgattgcggg gggcggtgat acactcgccg ctatcgccaa gtatgggatc
     1801 acggatcgga tctcgtatgt ctccaccggg ggtggcgcct ttctcgaata cctcgaaggc
     1861 aaagacctgc cggctgtggc tatcctggaa gagcgcgccc gcgctcaacg tctgcatccg
     1921 agtgaaggct actaacacgc gacatcaggt caaaaaccta tgcgacgcac taagatcgta
     1981 gctaccttgg ggcctgccac cgataagctt gaggtcctcg acagcctttt gaccgccggg
     2041 gtggatgtgg tgcgtatcaa ttattcccac ggatctttgg aaagccacac caagcgcatt
     2101 gaacaactgc gcgagcgagc caaggcacgg gatctccaga tcggggtgat cgccgatctg
     2161 caaggaccca agatccgcat cgagcgcttt cgccagggtc ccatcctgct tagagagggc
     2221 gaacacttca ccctggatac cgaactcggc cgcgatgaag gtgacgaata ccaggtcggg
     2281 gttacctata aagatctact ccgggacgtt acacccggag atatcttgtt ggtggacgat
     2341 gggcgtatcg tcctcaaagt cgaagggatc accagtcacc gtgtggaatg taaggtcctc
     2401 atgggaggac cgctttccaa taataagggt ttgaaccggg agggaggcgg tctgtccgcc
     2461 cgggccctga cccaaaagga tgagaaagat atccaccatg ccgtagaata cggggccgat
     2521 tacgttgcgg tctcttttcc acgtaacggc gatgacatca aggaggcccg gcgttggatc
     2581 gaaaaagcca acggcaaggc gggcgtcatc gccaagatcg aacgcgccga ggccttaagc
     2641 aatagcaaag agatcctcaa ggaagccgat ggcatcatga tcgcgcgtgg tgatctgggg
     2701 gtcgagatcg gtgatgcggc gctccctgcc gtgcaaaaac gcctgattaa actcgcgcgg
     2761 gatatgaacc gcgtggtcat taccgccacc cagatgatgg aatccatgat ccaacaccct
     2821 ataccgaccc gtgccgaggt attcgatgtg gccaatgcgg tgctcgatgg caccgatgcc
     2881 gtgatgctgt cggctgaaac cagtgttggg cgttatccca aaaaggcggt cgaggcaatg
     2941 gcccggattt gtctcaaaac agagatagag tcgggtgcca aaggggccga ttaccggctt
     3001 gatgcacagt ttgggcggat cgatgaggcg attgccatgg caaccatgta tgctgccaat
     3061 cacatcaatg ctcgggccat cgtggcgctt accgagaccg gctcgacctg tatgtggatg
     3121 tcgcgcgtgc gttccgggat cccgatcttt gcctttaccc ggcgacctga gaccttaagg
     3181 aaagtaaccc tgtatggggg cgtttatccc attccatttg atgtgaccca caccgatttt
     3241 ttacaaacca atcgggagat gatcgatatc ctgctggccc gcggcgcggt ggccgaaggc
     3301 gataatataa tcattaccaa gggggatctg cgcgggatcg ccgggggaac caatggcatg
     3361 aagatcgtgc gcgtgggcca attgattgat gatacggcgt gatctttact taccaaacaa
     3421 gggcggtacg gcttccgcag tgaccggcgg gctgaacctg aggccctgga cctcatcgca
     3481 cgcatacgcc tgcaacaacg cccgctgctc ctctgtctcc acgcccttgg ccacaacctt
     3541 cattccaaac tgacgggcca gcgccaggat ggcctggacc atcgccggat cctgcggcag
     3601 atcccgcacc aaggatcccg cgatcctcac ccggcggaag ggaaaccgtt taaggtacac
     3661 gaggctcgaa taaccggtgc caaaatcatc tagggcaagc tgcacgccca tcgcatgcaa
     3721 gcgcgtcaat acctctgccg cgtgcgccgg atcgatgatg aggctcgatt cggcaagctc
     3781 gagctcaagg caaggcggtt caagcccagt ctccgccagt attctgaaga tggcggcggg
     3841 cagatctcca tacctgagct gacgggtgga aaccggtacg gcgatccgca agcgcggaag
     3901 cccc
//
LOCUS       DASQSL010000077         1049 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_27730, whole genome shotgun sequence.
ACCESSION   DASQSL010000077 DASQSL010000000
VERSION     DASQSL010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27730"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..364
                     /locus_tag="VE844_00780"
     CDS             <1..364
                     /locus_tag="VE844_00780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99939.1"
                     /translation="HPAEELQRVFDFLGEPADVPAILSQALHGTEAVGLGDWKTYERR
                     AIHTESVGRWQCLSPSTVHWLVNIVAAEMELAGYPPVAAVVSPQPEVARRQYELGLLV
                     THMRSERQAAGKGQGVRR"
     gene            383..577
                     /locus_tag="VE844_00785"
     CDS             383..577
                     /locus_tag="VE844_00785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99940.1"
                     /translation="MAAKEVSPLRVWVLALVILVILVALGAALFVVLDDPLTFLADPG
                     DLGTACRAVTAIGCILPCCA"
     gene            620..853
                     /locus_tag="VE844_00790"
     CDS             620..853
                     /locus_tag="VE844_00790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99941.1"
                     /translation="MHFVSLVWFAWLAGTVATYWIVPHAWRDIWLMLVSLAFLVVHAP
                     ESALLLVFFSLLTYAFGKKRGVTPATGMPWLWR"
     gene            844..>1049
                     /locus_tag="VE844_00795"
     CDS             844..>1049
                     /locus_tag="VE844_00795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99942.1"
                     /translation="MAMILSVLIYYKVTVRGSPEDLLREVLIPMGLSYYSFRCLHYLL
                     ECYRGTLPSHTFREFLSYLFFLPTL"
BASE COUNT          172 a          310 c          311 g          256 t
ORIGIN      
        1 ccaccctgcc gaggaattgc agcgcgtctt cgactttctg ggtgaacctg ctgacgtgcc
       61 ggcgatcctc tcgcaagcct tgcacgggac cgaggcggtt ggcttggggg attggaaaac
      121 gtacgagcgt cgagccatac acaccgaaag tgtagggcgc tggcagtgct tgtcgccgtc
      181 tacggtgcat tggctcgtaa acatcgttgc cgcggagatg gaactggctg gctatccgcc
      241 cgtcgctgcc gtcgtctcgc ctcagccaga agttgctcgc cgtcaatacg aattgggact
      301 gctggtgaca cacatgaggt ctgagaggca agcagcgggc aagggacaag gggttcggcg
      361 ctaaggcttg caaaaacacc ttatggcagc aaaagaagtc tcacccttac gtgtatgggt
      421 actggccttg gtcattctgg tcattctggt tgccctcggc gccgcccttt ttgtggtgtt
      481 ggacgatccc ctcacattcc tcgccgaccc tggggacctc ggcaccgcct gccgtgcggt
      541 gaccgccatc ggttgcatac tcccttgctg cgcttgaggc gtccgttcaa cgcatcgcac
      601 gaggacaggc atcagccgta tgcacttcgt ttcgctcgtc tggtttgcat ggctcgccgg
      661 cactgtcgcg acctactgga tcgtcccaca cgcgtggcgt gacatctggc tgatgcttgt
      721 cagcctggcg tttttggtgg tgcacgcccc ggagtcggca ctcttgctcg tcttcttctc
      781 actgctgacg tacgcttttg ggaaaaaaag gggcgtcacg ccggctactg gcatgccctg
      841 gctgtggcga tgattctgag tgtgctgatc tattacaagg tcaccgtgcg gggcagtcct
      901 gaggacctct tacgcgaggt gctcatccca atggggctgt catattactc gttccggtgt
      961 ttgcactacc tgctcgagtg ttaccgcggc acgcttccgt ctcacacgtt ccgggagttc
     1021 ctgagttacc tttttttcct gccaacgct
//
LOCUS       DASQSL010000078         1096 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_55520, whole genome shotgun sequence.
ACCESSION   DASQSL010000078 DASQSL010000000
VERSION     DASQSL010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55520"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(18..>1096)
                     /locus_tag="VE844_00800"
     CDS             complement(18..>1096)
                     /locus_tag="VE844_00800"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006892744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HZB99943.1"
                     /translation="ALVAFTGDKAQLLEFHPLPVPKDLRADLVFLCDPGVRPLLEDYG
                     RLGIRVGRLFAEAVQQLLTKAGIPADRITAIGSHGQTLLHRPHLADRFSLQLGDPNTI
                     AHLTGITTVADFRRMDIAAGGQGAPLTPAFHEVQFRTESLNRVVLNIGGIANITVLPA
                     DPTLPATGFDTGPGNTLLDNWAQKHLDMPIDKDGQWARSGIIHQGLFAQLKADPYFQL
                     PPPKSTGRDYFNLDWLARILDGLTPPPAPVDIQASLLRLTADTIATAISRYAPATQEL
                     LVCGGGAYNPVLMQALAQAVGSACLLNSTARYGLDPSCIEAVAFAWLAKRRLEGYPGN
                     LPSVTGAAKPLVLGAVYAGSKVGG"
BASE COUNT          238 a          300 c          337 g          221 t
ORIGIN      
        1 ggatcttcgt tctccgttta gccgcccact ttacttccgg cataaacagc gcctaaaacc
       61 agcggtttag ccgcacctgt caccgagggt agattcccgg ggtacccttc caaccggcgt
      121 ttggccaacc aggcaaaggc cacggcttca atacagctcg gatctaaacc atagcgggcc
      181 gtagagttta gcaggcaggc ggaacccacg gcttgcgcta aagcctgcat caagaccgga
      241 ttgtatgcgc ctccgccaca gacgaggagc tcttgggtgg cgggagcgta gcggcttatg
      301 gcggtggcga tggtgtcggc cgtgagcctg aggaggctcg cctggatatc taccggtgca
      361 ggcggggggg ttaagccatc gagaatacga gcaagccaat ctagattaaa atagtcacgc
      421 cctgtgctct taggtggcgg caattgaaag tagggatctg ccttcagctg agcaaacagt
      481 ccttgatgga taatgccact tctggcccat tgaccgtcct tatcgatagg catatcgagg
      541 tgtttttgcg cccaattatc caagagcgtg tttcctggcc cggtatcaaa acctgtggct
      601 ggcagggtgg gatcggcggg cagaacggtg atattggcta tcccaccgat gttcaatacc
      661 acgcggttga gagactccgt gcgaaattgc acctcatgaa aagccggtgt cagcggcgca
      721 ccttggccgc ccgcggcgat gtccatacgc cgaaagtcgg cgacggtcgt gatcccggtc
      781 aggtgagcaa tcgtattggg atcgccgagc tggagggaga agcgatcagc gaggtgcggt
      841 cggtgcagca gagtctggcc atgactgccg atggccgtta tccgatccgc cgggatcccg
      901 gctttggtga gtagttgctg caccgcttct gcgaacagtc tgcctacccg gataccgagg
      961 cgcccatagt cttccagcag ggggcggacc cccggatcac aaaggaagac taaatctgca
     1021 cgcagatcct tgggaacagg taacgggtga aattcgagca attgagcctt atcaccggtg
     1081 aaggcaacca gcgccg
//
LOCUS       DASQSL010000079         1658 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_41823, whole genome shotgun sequence.
ACCESSION   DASQSL010000079 DASQSL010000000
VERSION     DASQSL010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1658
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41823"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..462)
                     /locus_tag="VE844_00805"
     CDS             complement(<1..462)
                     /locus_tag="VE844_00805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016402362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HZB99944.1"
                     /translation="MFRTSRDLWERIRNGMGLPQPERAAIASEIEWFSLKHVYFDQIA
                     DRARPYLHHIVEEIERREMPLEIALLPIIESAYRPTAYSPAGAAGIWQIVPGTGKRFG
                     LKQNAWYDGRRDILASTQAALDYLGILHKRFEGDWLLALAAYNCGEGAVGDA"
     gene            complement(902..1657)
                     /gene="gloB"
                     /locus_tag="VE844_00810"
     CDS             complement(902..1657)
                     /gene="gloB"
                     /locus_tag="VE844_00810"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006035715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004416 - hydroxyacylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0019243 - methylglyoxal catabolic process
                     to D-lactate via S-lactoyl-glutathione [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HZB99945.1"
                     /translation="MIPIPALKDNYIWLIQETDTVAIVDPGEAGPVLQVLHNQRLHPS
                     AILVTHHHGDHVNGIQELLKHYPVPVYGPAAESIPGRTQGLREGDKVHLPGLDIHLQV
                     FDVPGHTLGAIAYYGEGLLFSGDTLFTAGCGRLFEGTPAQMYESLSKLASLDETTQLY
                     CGHEYTLANLTFAATVEPDSSQLKTRLREVRERRAHGLPTVPATLSIERKTNPFLRCG
                     EPSVWLAAERYAGKSLGSAVEVFATLRLWKDCF"
BASE COUNT          374 a          452 c          449 g          383 t
ORIGIN      
        1 ggcgtctccg acggcccctt caccacaatt ataagccgct aacgcgagta accaatcacc
       61 ctcgaagcgc ttgtgaagta ttcccaggta atccagcgcc gcttgggtcg atgccaggat
      121 atcgcggcgg ccatcgtacc aagcgttttg cttcaatcca aagcgttttc ctgtgccagg
      181 gacgatctgc cagatacccg ctgccccggc cggcgaatag gcagtgggcc gataggcgct
      241 ttcgatgata ggcagcaagg cgatctccag gggcatctcg cgccgctcta tttcctctac
      301 aatatggtgc aggtagggcc gagcgcgatc ggcgatctgg tcgaagtaga catgtttgag
      361 ggaaaaccat tcgatctcgg aggcgatcgc ggcacgctcg ggctgtggga gtcccattcc
      421 attgcggatc cgctcccaca gatcccggga agttctgaac attcgcaatc tctttgcttt
      481 agatcgtata ggggtccgac gaggcgcaag acgcagccgc tttgtgaggt gtacccgctt
      541 aaccgctcgg ataggctccc atagaccatc gcgtttattt acccgcttta tcccctcctc
      601 cgaccctgcc aaactctctt tatcccactg aatcgggcac accgctgctc tatgagccgc
      661 aggatgatca cgaggggtag aggaggttga agcggtgata ggggttctaa gctcggtttg
      721 tggaagggtg taggatccct cgctctcccg taccggtgcc gtgaaacacc cactgagagc
      781 actgcacacg ctgataatta ttaagccttt ttttaagcgc atgttttgat gctatagata
      841 tttttcctga tgctacaggt atttccccct gtatgtcaac cctatttctt aaaacaattt
      901 ttcaaaaaca atctttccat agccgtaggg tggcgaagac ctccacagcc gatcccaacg
      961 acttcccagc ataacgttca gcggccagcc aaacgctcgg ctcaccacag cgcaaaaagg
     1021 ggttggtttt tctctctatc gagagggtag caggaacagt aggtaagcca tgcgcacgtc
     1081 tttcccgaac ctctcggagg cgggttttta gctgtgagct atccggctca acggtcgctg
     1141 caaaggtgag attggccagg gtatattcat ggccgcaata aagttgagtg gtttcatcaa
     1201 ggctagcaag cttagagagc gactcataca tctgcgcggg ggtgccctcg aacaaccggc
     1261 cgcagccggc agtaaagagg gtgtcgccgc taaagagtaa accctcgcca taataggcaa
     1321 ttgcacccaa ggtatgccca gggacatcaa acacctgaag atggatatcc aagccaggca
     1381 gatgcacctt atctccttca cgtaggcctt gggtccggcc tggaatggat tctgcggcgg
     1441 gtccatagac cggcaccgga taatgtttga gcagttcctg aatgccgttg acatgatccc
     1501 cgtggtgatg ggtaaccagt atggcgctag gatggagccg ttgattgtgc agtacctgca
     1561 acaccgggcc ggcctctccg ggatcaacaa tcgcgacggt gtcggtttct tggataagcc
     1621 agatgtagtt atcctttaaa gccgggatcg gtatgata
//
LOCUS       DASQSL010000080         1387 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_27734, whole genome shotgun sequence.
ACCESSION   DASQSL010000080 DASQSL010000000
VERSION     DASQSL010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1387
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27734"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..883)
                     /locus_tag="VE844_00815"
     CDS             complement(<1..883)
                     /locus_tag="VE844_00815"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZB99946.1"
                     /translation="MEHGNVWGAATGAADRFRTPTMNLIVQPNPYDADGEFIPDLAQS
                     WTIHEDHQGVTFNFHDGIKWHNGAAFTCEDARFSLETMITGNGLTNSYMKGFLPHVDL
                     NKLTCEDDQTLTMGFKGPTSIPLSALTNRRAVIFNKAWFEAGGEEAMFQDISVGTGAF
                     KWAPGQKVGDVTQSYERNPDYFFGDGSVPYLDSLIFVSIVDESAQQAAMLAHQGDWHW
                     VRNWGQYNAYVEHDQIRTAIRTTRGHSQLWMNVRNQPFDNVRVRQAIVMGIDRNAAIA
                     VLQEGHASPGFLFSPGSP"
BASE COUNT          293 a          370 c          413 g          311 t
ORIGIN      
        1 aagggctgcc gggagaaaac aggaacccag gggaggcatg accctcctgg agcaccgcta
       61 tcgccgcatt ccggtcgatt cccatcacga tggcctggcg cacccggacg ttgtcaaagg
      121 gctggttacg tacgttcatc cagagctgag agtggcctcg ggtcgtccgg atggccgttc
      181 ggatctggtc gtgttccaca taggcgttgt actgccccca gttgcgcacc cagtgccagt
      241 cgccttggtg ggccagcatg gctgcctgct gggccgactc gtccacaatg ctgacgaaga
      301 ttaacgagtc aaggtacggc acactcccat cgccaaagaa gtaatcgggg ttcctttcgt
      361 agctctgcgt gacatccccc accttctgtc ctggagccca cttgaaggca ccagtcccta
      421 cggagatgtc ctggaacatg gcttcttcac cacccgcctc gaaccaggcc ttgttgaaga
      481 tgacggctcg gcggttggtg agggcactca gggggatgga agtggggcct ttgaacccca
      541 tggtcagggt ctggtcatcc tcgcaggtca gcttgtttaa gtctacgtga ggaaggaagc
      601 ccttcatgta gctgttggtg agcccattac cggtgatcat ggtttccagg ctgaaccggg
      661 catcctcaca ggtgaatgca gcgccgttgt gccacttgat gccatcatgg aagttaaagg
      721 tgacgccctg gtgatcctca tggatggtcc agctttgggc taagtctggg ataaactccc
      781 cgtcggcatc atagggattg ggttgtacga tgaggttcat ggtaggtgtc cggaaccggt
      841 cggcagcacc ggtggcggct ccccagacgt tgccgtgctc caaaggatcc tcataaataa
      901 tccggagggt gccgccctta accggctctc cataagcagc agtgggtggc tgccagtact
      961 gagcaaagct aggtgcatac tcaactccag gtttcgcact ctcaagcggg ggtttgatgg
     1021 gttctggcgt tgcggttggc actggggcct gggccgattg ttccgctgcc ggggaggcag
     1081 tcgttggtgc ttcggcaggc ggtgccgtgg tgccgcaacc aaccgccaag aggaggacta
     1141 gcatcagggt aataggtact actaacctag gattcctgaa ccggggatga atcatctaga
     1201 cacctccaaa ctctgaaata gcctcggtta ggatctgaag agccttaatg agaaacctga
     1261 aaagaccctg gtgactctag cggtagaact ggagcctgtt gctgattacg tcatattcct
     1321 tccagaatat gacgtgttca tgcagtacta ttgctgaaaa cgtatactag taaagaaata
     1381 cgatcct
//
LOCUS       DASQSL010000081         1384 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_719, whole genome shotgun sequence.
ACCESSION   DASQSL010000081 DASQSL010000000
VERSION     DASQSL010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1384
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_719"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..383)
                     /locus_tag="VE844_00820"
     CDS             complement(<1..383)
                     /locus_tag="VE844_00820"
                     /inference="COORDINATES: protein motif:HMM:NF021604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HZB99947.1"
                     /translation="MFWRSLGFTTTALALSLLLYIGFTPSPAAYIVVLNDNSAKPAWL
                     VSLYPNRITIKTQRLQSLAPGKSFELWMLPERGQKPRSLGLIPASGRRTLYLPEWASQ
                     LPVSAQGLAVSIEPQGGSPTGEPTGP"
     gene            complement(408..650)
                     /locus_tag="VE844_00825"
     CDS             complement(408..650)
                     /locus_tag="VE844_00825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99948.1"
                     /translation="MKPRDPKLRELLAGEYVLGTLHGRARKRFKRWLEEDARLGWLVE
                     DWEQRLDTLALAAPAVKPRPEIWRTLKRRTQPVKQK"
     gene            complement(679..1131)
                     /locus_tag="VE844_00830"
     CDS             complement(679..1131)
                     /locus_tag="VE844_00830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99949.1"
                     /translation="MNTLLKNPYIRLFAAGLLTISSTGSYPADGTSAFAEGQRFYAEA
                     QFTAARAAFEQAVQCQPAVSEYHHWLGRTYGRLAEHAGWFEAMRLARQTREALERAVK
                     LDPNNVEALSDLREYYLQAPAFLGGGQVKADRIRQQLEDVLSDSARTP"
BASE COUNT          306 a          392 c          374 g          312 t
ORIGIN      
        1 ggccctgtgg gctcccccgt cggtgatcca ccttgaggct cgatactgac agccagcccc
       61 tgggcgctta caggcaattg gcttgcccat tccggtagat agagggtgcg cctgcctgag
      121 gctgggatca ggccaagcga acgaggcttt tgcccccgtt ccggcagcat ccacaattca
      181 aaggacttgc cgggagcaag ggattggagg cgttgggtct taatggtgat cctgttggga
      241 tagaggctaa cgagccaagc cggtttggct gaattgtcgt tcaacactac gatataggcc
      301 gccggagagg gcgtaaaacc gatataaagg agcagcgaga gcgccagggc cgtggtggtg
      361 aaaccgaggg agcgccagaa cacgagattc tcccaaagtc cgaacgatca cttttgcttt
      421 acaggttgag tacgccgctt caaggtacgc caaatctctg gccgaggttt gacggcgggt
      481 gccgccaaag ccagcgtatc taaacgctgt tcccaatcct cgactagcca cccaagcctg
      541 gcatcctctt cgagccagcg cttgaaccgt ttacgcgccc ggccatgcag tgtcccgagc
      601 acatattcgc cggctaaaag ttcgcggagc ttgggatccc ggggtttcat cctgctacct
      661 gataaatacc caagagtact agggcgtgcg ggcgctatcg ctcagcacat cttcaagttg
      721 ctggcggatc cggtcagcct tcacctggcc gccccccaaa aaggcggggg cttgtaagta
      781 atattccctg agatcggaga gcgcttctac attgtttggg tctagcttga cggcgcgctc
      841 cagtgcttcc cgcgtttgtc ttgcaagccg catcgcctcg aaccagccgg catgttctgc
      901 caaccgccca tacgtgcggc ctagccaatg atggtactcc gagactgccg gttgacattg
      961 cacagcctgt tcaaaggcgg ctcgggcggc cgtgaattgg gcctcggcat agaatcgctg
     1021 cccctcagca aaagcgctcg tcccatctgc cggataagat ccggtgctcg aaatcgtcaa
     1081 taagcctgcc gcaaacaggc ggatgtacgg attctttaac aaggtattca tgcctttttt
     1141 cctcgcaata aatggtgcat ccaaaatctg tttttcttcg tattttagaa gataagtgtc
     1201 taagcgaata gcgcacttac tcaccccaac caaaggagga tcttacgcga cttatacttc
     1261 acgcggcctt agatgagact tttttctggg gctggttagc cccagaaaag aggctcactt
     1321 tacctccttc gccaatcacg ggcacttctt tgaaagtttg aaaccgcaag gttaacaaac
     1381 tctt
//
LOCUS       DASQSL010000082         1267 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_41840, whole genome shotgun sequence.
ACCESSION   DASQSL010000082 DASQSL010000000
VERSION     DASQSL010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1267
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41840"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(203..>1267)
                     /locus_tag="VE844_00835"
     CDS             complement(203..>1267)
                     /locus_tag="VE844_00835"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZB99950.1"
                     /translation="SEEERTRNPIGFGPYRFTGWESGVRITLEAYEDYLPNEASDARA
                     PLIKNVTQLWREEALVRASMVETGEADWADNIGFENADRVPQAIQSGTNEIYMLVADT
                     IWHPELRKKEVRQALAQAIDCQELVETLYEGRQECFANISQPGTLGINEENSRPYEYN
                     PELSRQLLEQAGYNPENEIIIHTREGRVYRDVELWEAVANYWRELGVNARVQVLEQAQ
                     ATAVRRSGCGQYEPALAIKCHEQPPAPPTNTSSHYYESASSNETLDFSRQGILRLSCF
                     NVNSRVCDPEFEEKINKAKATPLGPERERLLAELAQRAHDEYWFIPFFHIQAVYGLAE
                     DLVWAPRYDPRVRINTMHFR"
BASE COUNT          259 a          360 c          362 g          286 t
ORIGIN      
        1 ggtgtctttc agcaccaggg aggggcgggc ttgaaacccg cccctacctg gtaatatgac
       61 caggcccaaa aatggacata atcctcaaag caggatttag cgcctgggaa tggggtaggt
      121 aaacataacg gttacttttg agaaaaaacc gcaccccagt aaccttgggg cggattaagg
      181 acatgccgaa gaggggttca gcctacctga aatgcatagt gttaatccgc acacgcgggt
      241 cgtagcgcgg agcccacact aggtcctccg ccagcccata gacggcctgg atgtggaaga
      301 agggtataaa ccagtactca tcatgggccc tttgggccag ttccgccaga agtcgctccc
      361 gttctggtcc cagaggagtg gccttcgcct tgttgatttt ctcctcaaat tcggggtcac
      421 atacccggct gttgacgttg aaacagctca gccggaggat gccctgcctg gagaagtcca
      481 acgtttcgtt agaactggca ctttcatagt aatgggatga ggtgttggta ggaggcgctg
      541 ggggctgttc atggcacttg atggcaaggg caggttcata ttgcccgcag ccggagcgcc
      601 ttactgcggt agcctgggcc tgttccagga cctggactct ggcgttgacg cccagctccc
      661 tccagtagtt agctactgcc tcccacaact ccacgtctcg gtagacccgg ccttcccggg
      721 tgtggatgat gatttcgttc tcggggttgt atccagcctg ctccagcaat tgccgagaca
      781 gttccggatt gtactcgtag gggcgggagt tctcctcatt gatgcccaag gtgcccggct
      841 gggaaatgtt agcaaaacac tcctggcggc cctcatagag agtctccacc agttcctggc
      901 agtcaatggc ctgggccaga gcctggcgca cctctttctt tctcaactcc ggatgccaga
      961 tggtatccgc cactagcatg taaatctcgt tggtgccgga ctgaatagcc tgaggcaccc
     1021 ggtcggcgtt ctcaaaccca atgttgtcag cccagtccgc ctcgccggtc tcaaccatag
     1081 aagcccgcac tagtgcctcc tcgcgccaaa gctgggtcac gtttttgatg aggggcgctc
     1141 tggcatcaga agcttcattg ggcaggtagt cctcataggc ttccagggta attctgactc
     1201 ctgattccca gccggtaaag cggtaggggc cgaacccgat gggattgcgc gtccgctcct
     1261 cttccga
//
LOCUS       DASQSL010000083         1005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_151756, whole genome shotgun sequence.
ACCESSION   DASQSL010000083 DASQSL010000000
VERSION     DASQSL010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151756"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..706)
                     /locus_tag="VE844_00840"
     CDS             complement(<1..706)
                     /locus_tag="VE844_00840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99951.1"
                     /translation="MRNITRQTRENRTITIDFQDETTYFQALGDGKAFVELVMAFILS
                     IGFQLKHKAICRGGGCLTRHSHYVRVRLSGLTIWRIQCTRCKAVFTVLPHFVLRYRQR
                     RPEVARNALLATHGDLSLEWCAVICHISPMALYRLVCALGQQSMITVLTRCGLPLPPY
                     FLADEKHSHCLTDKVYLPTSICGRVIWHLGDTEEASAVAFTQAYGAFQRAASQQEPSY
                     RVRGVLTDGFDSTTKSM"
BASE COUNT          232 a          262 c          305 g          206 t
ORIGIN      
        1 gcatactctt ggtggtgctg tcaaagccat cggtgagcac ccctcggacc cgataggatg
       61 gttcctgctg ggaggctgcg cgttgaaacg ccccataggc ttgggtaaag gccacggcac
      121 tggcctcctc ggtgtcgccc aggtgccaga tgacacgacc acagatactg gtggggagat
      181 acaccttgtc cgtgagacag tgactatgct tctcgtcggc caagaagtag ggcggcagcg
      241 gcagcccaca ccgggtgagc acggtgatca tactctgttg gccgagtgcg cagacgaggc
      301 gatagagcgc catgggggag atatggcaga tgacggcaca ccactccaaa ctcaagtcac
      361 cgtgtgtggc caacagggca ttgcgggcca cctccggtcg cctctggcga tagcgcaaga
      421 cgaagtgcgg cagcacggtg aataccgctt tgcatctcgt acattggatg cgccagatgg
      481 taagaccact cagccggaca cggacataat gggagtggcg tgtcaggcac ccgccgccgc
      541 gacagatcgc cttgtgtttc agctgaaacc cgatggacag gatgaacgcc atcaccaatt
      601 caacaaaggc cttgccgtcg ccaagcgcct gaaagtaggt cgtctcatcc tggaaatcga
      661 tggtaatggt ccggttttcg cgggtctggc gagtgatgtt tcgcatgggt catcctcagg
      721 tcagatagtg gttgcagcag atgacccaag atggaggtat gactgaacaa tttcaagggg
      781 attgcgaaag gcgtctgggc ttcaccacta aatccggggg aatgtgagaa tttgaactta
      841 ctcttggcaa cggagaaaca tgcaacgtcc gctattgcga tcgctggggg gctgccatgt
      901 ttggcaatcg tacaatccat tttgaattcc gggactgcct gtcagtctct cacacgaaat
      961 accgaagcga atttcgtgtc gttggagaga acgagtacat cgatc
//
LOCUS       DASQSL010000084         1936 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_179259, whole genome shotgun sequence.
ACCESSION   DASQSL010000084 DASQSL010000000
VERSION     DASQSL010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1936)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1936)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1936
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179259"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..327
                     /locus_tag="VE844_00845"
     CDS             <1..327
                     /locus_tag="VE844_00845"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HZB99952.1"
                     /translation="ALAAMKKMRAIDSSQLPVFEEGSVVGTVYDDDLINAILQAKDLA
                     SMTVRELMRESLPIIQREATLEEITRFIPGKCPALLVDLGNGQYQILTKFDLVTAVGT
                     FAEGKR"
     gene            338..1483
                     /locus_tag="VE844_00850"
     CDS             338..1483
                     /locus_tag="VE844_00850"
                     /EC_number="2.5.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011483744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine gamma-synthase"
                     /protein_id="HZB99953.1"
                     /translation="MRFATRAIHAGQEPDPTTGAIMTPVYLTSTYVQEAPGRHQGYEY
                     SRTKNPTRTALEANLAALEEGRFGLAFASGMAAEATILQLLNSGDQVVCCQDLYGGTY
                     RLMTRVFQRFNIETRFVDATEIQAVTQAIRPTTRLIWLESPSNPMLTVCDIAAIAAIA
                     HKEGIKVVVDNTFASPALQQPFKLGADLVLHSTTKYLGGHSDVVGGAIIVNDEALYQE
                     LKFLQNAIGAVPGPFDCFLVLRGIKTLAVRMRAHCQNAMALATHLAQHPEVVRVLYPG
                     LPESPYHPLAIKQMSAFGGMISLELQGGPERNIRFASKTKIFALAESLGGVESLVGYP
                     LVMTHAAIPAEQRKKAGLPEALVRLSVGIEDIEDLIEDIEQAIQASR"
     gene            1641..1763
                     /locus_tag="VE844_00855"
     CDS             1641..1763
                     /locus_tag="VE844_00855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99954.1"
                     /translation="MAKAEKSSKKAIEAAPKKSKGTTASVKKEAKKAPAAKSKK"
BASE COUNT          446 a          542 c          520 g          428 t
ORIGIN      
        1 gcacttgcgg cgatgaagaa gatgcgggca atcgattctt cccaattgcc agtattcgag
       61 gaaggatcgg tagtcggcac cgtctacgat gacgatctga tcaatgctat tctacaggcc
      121 aaggatctcg cttcgatgac ggtccgtgag ctcatgcgcg aatcgctgcc cataatccag
      181 cgggaggcaa ccttggagga gatcacccgg tttattcctg ggaaatgccc ggcgctgctt
      241 gtggatctcg gcaatggcca gtatcagatc ctgactaaat ttgatcttgt gaccgccgtc
      301 ggcaccttcg ccgaaggcaa aaggtaaaga gaagaccatg cgctttgcta cccgagccat
      361 ccatgccggg caagaaccgg atcccacgac cggcgcgatc atgacgccgg tctatctcac
      421 ctcgacctat gtccaggaag ccccaggaag acaccagggc tacgaatatt cgcgcacgaa
      481 aaacccgacc cgcacagcgc ttgaagccaa tctcgcggcc ttggaggagg gccggttcgg
      541 tcttgccttt gcgagcggca tggccgcgga ggcgacgatc ttgcaactgc tcaatagcgg
      601 tgaccaggtc gtctgttgtc aggatctcta cggcggcacc tataggctca tgacccgggt
      661 cttccagcgt tttaatatcg agacccgctt tgtggatgcg actgagattc aggcggtcac
      721 tcaggcgatc cggccgacga cacgtctcat ctggctcgaa tccccgagca acccgatgct
      781 gaccgtatgc gacatcgcgg cgatcgcggc gatcgctcat aaggagggca tcaaggtggt
      841 ggtggacaat accttcgcct cgcctgcgct tcaacagcct ttcaagctcg gcgccgatct
      901 cgtgctccat agcaccacca agtatctggg cggccattcc gatgtggtcg gcggggcgat
      961 cattgtcaac gatgaggcct tgtaccaaga gctcaagttc ttacagaacg ccattggggc
     1021 agtcccaggt ccgttcgatt gtttcctggt gttgcgcggc atcaagacgc ttgccgtgcg
     1081 catgcgcgct cattgccaga acgcgatggc gcttgccacg cacctggctc agcatcctga
     1141 ggtcgttcga gtcctttatc ccgggctgcc ggaaagcccc tatcacccac ttgcaataaa
     1201 gcagatgtcc gcctttggcg gcatgatctc gttagagttg cagggaggtc cagagcgcaa
     1261 tattcgcttc gcctcaaaga ccaagatctt tgcgcttgcg gaaagcttgg gcggggttga
     1321 atcgctggtc ggctatcctt tagttatgac ccatgccgcg atcccggccg agcagcgcaa
     1381 gaaagcgggg cttccagaag cattggtgcg gctttcggtc gggatcgaag acatcgagga
     1441 tctcatcgag gacatcgagc aggcgatcca ggcttcgcgc tgaggttttt tggtggagac
     1501 cctgttcatt tcatcctcca caggcttaag aacttttcat ttttttcgct ataattagag
     1561 tatctctcga gtatagaggg aaactaccta aacaacgtat tgtttttttg attgacatct
     1621 atttttttaa ggagaatacc atggcaaagg cagaaaagtc ttcgaagaag gccatcgaag
     1681 cagcacccaa gaaatccaag ggaaccaccg ccagtgtaaa aaaggaagct aaaaaggctc
     1741 ctgccgctaa atcaaaaaaa tagatctact cgattttttt tgacgagtac taataaagga
     1801 cggggggtct actcccgtcc tttttttctt taggtcccaa gacaaaacgc tgggtagcac
     1861 ccagttaacc ccgctcgtct cactccccgg tctgcagcaa caacccccgc tcacgggcaa
     1921 ggcgaaacac ccacaa
//
LOCUS       DASQSL010000085         1075 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_124306, whole genome shotgun sequence.
ACCESSION   DASQSL010000085 DASQSL010000000
VERSION     DASQSL010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1075
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124306"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..957)
                     /locus_tag="VE844_00860"
     CDS             complement(<1..957)
                     /locus_tag="VE844_00860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007354878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HZB99955.1"
                     /translation="MKKIRPYGSWSSPITSDLIVSKTIGLSEITLASGDIYWLEMRPE
                     EGGRSVIVRATPEGKTHDLLTPAPFNVRTRVHEYGGGAYLVDGETVYFSNFADQRLYR
                     LMLGAEPEAITPEAEFRYADAVMDKFRQRLICVREDHSSQASDPINTIVSIPLSTPSD
                     PKVLISGADFYANPRLSPDGRSLCWIGWYHPNLPWDGTELWLAEIDDDGQAGQAQRIA
                     GGPEESIFQPEWSPDGTLYFISDRTGWWNLYRWQQGMISPVVQMEAEFGVPLWQFRES
                     TYAFASARQIICTYSQDGLSHLASIDTASGKLEIIETPYTDIG"
BASE COUNT          243 a          280 c          324 g          228 t
ORIGIN      
        1 tccaatatcc gtgtaaggtg tctcaatgat ttcaagcttg ccagacgctg tatcgatgct
       61 cgcgagatga ctgagcccat cctgcgagta ggtgcagatg atttggcggg cagaggcaaa
      121 ggcgtaggtc gattctctga actgccacag cggcacaccg aattcagctt ccatttgcac
      181 cacaggagag atcatgccct gttgccaacg gtagagattc caccagccgg tgcgatcgga
      241 gatgaaatat aaagtcccgt ctggagacca ttcgggctgg aagatcgatt cttccggtcc
      301 gccggcgatc ctttgggcct gaccggcttg gccgtcatcg tcgatctcag ctagccaaag
      361 ctcggtgcca tcccagggca ggttcgggtg ataccagccg atccagcaga gagaacggcc
      421 atcggggctc agccgggggt tggcataaaa gtcagcgcct gagatcagga cctttggatc
      481 cgagggggtt gagagaggga tactgacaat cgtgttgatg ggatcggaag cctggcttga
      541 gtgatcttcg cggacacaga tgaggcgctg cctaaacttg tccatcaccg catcggcgta
      601 gcgaaactca gcttcagggg tgatggcttc gggttcagcc cccagcatca agcggtacaa
      661 ccgctggtcg gcaaagttgg aaaagtacac cgtctcgcca tcgacgagat aagcaccgcc
      721 gccgtattca tggacgcgcg tccgaacatt gaagggagcg ggagtgagga ggtcgtgggt
      781 tttgccctca ggcgtcgcgc gcacgatcac cgagcggcca ccttcctccg gtcgcatctc
      841 tagccagtag atgtcaccac tggcgagcgt gatttcactg aggccgatgg ttttggagac
      901 gatgaggtca ctggtaatag gggaggacca ggagccatag ggacggatct tcttcattaa
      961 tttgcttgta accacatctc ttgcgcgatg caatgcgagc ctctagccca ggatagtata
     1021 ggatagtata gataatgggg acctactctg accaccctcg cgagctatag tagat
//
LOCUS       DASQSL010000086         1699 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_179265, whole genome shotgun sequence.
ACCESSION   DASQSL010000086 DASQSL010000000
VERSION     DASQSL010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1699
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179265"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..816
                     /locus_tag="VE844_00865"
     CDS             <1..816
                     /locus_tag="VE844_00865"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase domain-containing protein"
                     /protein_id="HZB99956.1"
                     /translation="FGSGRSGSTWLRSMMGEMGDSRVWEEPMVGRLFGEFYARTPKVN
                     LRSADFIMGHPIRRGWMTSVRHFVLDGAIYSNPGLDAGQYLIIKEPNGSVGAPLLMEA
                     LPESRMILLVRDPRDVVASVLDAAREGGWLYERRDRGAGKRRGKLDKRPNSFVRERAK
                     VYRRGVENAKRAYDAHKGPKVLIRYEELRADTLAVMKYTYSVLGIPVNEEKLRRAVEK
                     HIWENVPEEDKGEGKFYRKATPGGWKEDLTPEQAEAVVRVTAPLLKELYPEKG"
     gene            complement(1237..1422)
                     /locus_tag="VE844_00870"
                     /pseudo
     CDS             complement(1237..1422)
                     /locus_tag="VE844_00870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014663934.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          381 a          466 c          507 g          345 t
ORIGIN      
        1 ttcggctctg gacgctccgg cagcacgtgg cttcgcagca tgatggggga gatgggcgac
       61 agccgggttt gggaggagcc gatggtaggc aggctcttcg gagagttcta cgccagaacc
      121 cccaaggtga atctgcgatc cgccgacttt atcatggggc atccgattcg aaggggttgg
      181 atgacgtcgg tgagacactt cgttctcgac ggggcgatat attccaaccc aggtctcgac
      241 gctggacaat acctgatcat caaggagccg aacggctcgg tgggggcgcc tctgctgatg
      301 gaggcgttgc ccgagagccg catgatcctg ctggtgcgcg accccaggga cgtggtggcc
      361 tccgtcctgg atgctgccag agagggggga tggctgtacg agagacggga cagaggagcc
      421 ggaaagcggc gcggtaagct cgacaaacgg ccaaactctt tcgtaaggga gagggcgaaa
      481 gtgtaccggc gaggcgtcga gaacgccaag cgcgcctacg atgcccacaa agggccgaag
      541 gtcctgatcc gctatgagga gctgcgtgcc gacaccctgg ccgtcatgaa gtacacctac
      601 tccgttcttg gaatcccggt aaacgaggaa aagctgcgac gagcggtaga gaaacacatc
      661 tgggagaacg tacccgagga ggacaaaggg gaaggcaaat tctaccgcaa ggcgacccct
      721 ggcgggtgga aggaagatct cactcccgag caggcggaag cggttgtgcg ggttactgcg
      781 ccgctgctca aagagctcta tcccgagaag ggatagccgg ccgcgagcat ccggtagtat
      841 ttcgagagca cggatcctgg tactcgatcg tcgcctgatc ggcgctgtca ttgtccacta
      901 acaggaactt gtagttgcgt taggtcgtca ggcgctcaat gctctcgacg cacttctaaa
      961 gcaacggcat gagaacactg gtgtagcttc ccgagagtag taaacgttct gcaccgttcc
     1021 gatgcatgcg ggtcaatcac actgcaaccc gcttctacaa attagtgtac agttttaacc
     1081 gggaaagtaa taggaaacgg tgcgagaaag gcagaaaaat catgaacggc ccactttgtt
     1141 tcgtgttcat gcccttcggc gaaaagccag acggcatggg cggaacggtt aacgtcgacg
     1201 cggtgtaccg ggagctcatt actccagcta ttgaaaggca tttttggcct cgcgcctaaa
     1261 gcgctcgacg aacccctcgt cgtgggcgta atgctccctc aagaccttta aggccacctc
     1321 gcggtcaagc acgttgtcgt gggccaggta cacctgcgcc atgccaccac cacccaagac
     1381 ctcaagcagc atgtagcgat cacctaggac tgtcttttgc attggaggca ttctatcttc
     1441 atcccatagc cttattcacc cgagtaatgc gtggatggcg aattctgcta ggttcgcctg
     1501 tacagaattc tcggaagttc ccacgattcc catcgactct cagcttttct cagaatcgcc
     1561 cgccattctg tcccttttcg gggctcggcg attgtgccca atgacatgct tcgttcgccg
     1621 agccccgaaa agaggcgtaa gctgtatata cgagcgcctt tctcagatgg actgtttttg
     1681 gcacatcccg cgcaagtgc
//
LOCUS       DASQSL010000087         1097 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_165231, whole genome shotgun sequence.
ACCESSION   DASQSL010000087 DASQSL010000000
VERSION     DASQSL010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165231"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            193..277
                     /locus_tag="VE844_00875"
     tRNA            193..277
                     /locus_tag="VE844_00875"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:227..229,aa:Ser,seq:tga)
     gene            434..712
                     /locus_tag="VE844_00880"
     CDS             434..712
                     /locus_tag="VE844_00880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011565581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99957.1"
                     /translation="MKRIILLAMVAFMAMLVLAPMAMAQDTTMMMEDSMMMEDSMMME
                     DSMMMEMTGTGQMDDDDLPESGGPAILLPAAALLVGSGILTYAILRRR"
BASE COUNT          232 a          308 c          345 g          212 t
ORIGIN      
        1 gccgacggcc tgcggaccga gggctggcac ggctactact gggccaggcc caccgctgga
       61 ggggactacg agatccggag cgtcccggcc tccctcggcg agccttcgac cccgggcggc
      121 gtcgtcccca aggagccctt cgagaggctc tacgctaagg cagaccgcgt ataatggtcc
      181 cccacgcagc gcgggggcat ggcagagcgg acgaatgcgc tggtcttgaa aaccagaggc
      241 gccaaaacgc ccgaaggttc gaatccttct gcccccgcat ccgcgccgta tgcgcgatac
      301 tcgttaaatt tgttaaaaat cattaagata ttggagactt ttgcgtttcg gttctgtaca
      361 ctgtgggtaa cttctcggtt ggagaaggaa gtgcaggccg cttgacagac agagtaaaca
      421 gaaggaggac tggatgaaga ggataattct cttggcaatg gtcgctttta tggccatgct
      481 ggtcctggcg ccgatggcga tggctcagga cacgaccatg atgatggaag acagcatgat
      541 gatggaggac tccatgatga tggaagactc catgatgatg gagatgaccg gcaccggtca
      601 gatggacgac gatgatctgc cggagagcgg tggcccggcg atccttctgc cggcggccgc
      661 gctgctcgtg ggttcgggta tcctgaccta cgccatcctg cgacgcaggt agtagcagac
      721 gaaacatccg ggggacggac caatgactgg tccgtcccct aatttgaccg ggggcgagcc
      781 tgcacctccc cggtcttttt ttgtagctat cggccctcag cgatcagcct tcagctgatc
      841 cttcgataga gcacagcgca ccaacgagcg gggccttcgc cgcagatatt ggcgaaggcc
      901 ccgctcgttc gcaacgcatt cagagataga ggctgacggc tagaaaggct gagccgccca
      961 ggactcgaac ctggaagcta aaggttaaga cgcctccgcc ggcaggtttc tgacgtttgc
     1021 tacgggttgc gttgcacctg caaataacgt ccttgtttgc tggaggggta ccgggcaaca
     1081 gccggctaca gcatcgg
//
LOCUS       DASQSL010000088         1220 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_192696, whole genome shotgun sequence.
ACCESSION   DASQSL010000088 DASQSL010000000
VERSION     DASQSL010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1220
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192696"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            56..760
                     /gene="tmk"
                     /locus_tag="VE844_00885"
     CDS             56..760
                     /gene="tmk"
                     /locus_tag="VE844_00885"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HZB99958.1"
                     /translation="MRQSANYSAFPGKLIAVEGLDGSGKSTQIYLVKRWLELEGYKVF
                     FTAWNSSLLVKSTTKKGKKRHLLTPTTYALIHCTVFADRYERQILPMLHAGCMVVADR
                     YIFTAFARDAARGCDREWVRQLYSFARHPDVTFFFDVPLDTALRRILVGRPHLKFYEA
                     GMDMGLSKDPHQSFQLFQGRVYEEYQHMLGEFDFHRIDASRSPGVQQQEVHSLLQKHI
                     DLRRYRWKILPGGTPP"
     gene            760..>1220
                     /locus_tag="VE844_00890"
     CDS             760..>1220
                     /locus_tag="VE844_00890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020147812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate kinase"
                     /protein_id="HZB99959.1"
                     /translation="MPKRFYGTGLPDIELALLKGKLIVIEGADGSGRSTQIAILRNWL
                     ERLGYPTAEIGLKRSTLVGRELEEAKQGHILSPLTFSLFYATDFADQLENIIIPALRA
                     DFIVLADRYIYTLMARDIVRGVDPQWVKEVYSIALMPDAVFYLQVSPQGLA"
BASE COUNT          256 a          340 c          339 g          285 t
ORIGIN      
        1 gctgttcgag gaagtctttg gggctagaat ggccatcgtg gactaggggc tgcagatgcg
       61 ccagtcggca aactacagtg ccttcccagg aaagttgatt gcggtggaag ggctcgatgg
      121 ctctggtaaa tctacgcaga tttatctggt gaaacgctgg cttgagctgg aaggctataa
      181 ggtttttttc accgcctgga attcctcctt actagtcaag agcacgacga aaaaaggcaa
      241 gaaacgccac ttattgaccc ccacgacata cgccctcatt cactgtaccg tttttgccga
      301 ccgttacgag cgccaaatct tgcccatgct ccatgccggc tgcatggtcg tcgctgaccg
      361 ctatattttt accgcctttg cccgcgatgc ggcgcgcggc tgcgatcgcg agtgggttag
      421 acagctctac agttttgcgc ggcatccgga tgtgacattc ttcttcgatg tcccgctgga
      481 cacggccttg cgtcgcatcc tggtaggacg tccccacctc aaattctatg aggcaggtat
      541 ggatatgggg ctatccaaag atccgcatca gagctttcag ttattccagg ggcgggtgta
      601 cgaggaatat caacacatgc tcggggagtt cgattttcac aggattgatg ctagtcgctc
      661 gccgggcgtc cagcaacagg aggtccacag cctgctccag aaacacatcg acctccgccg
      721 ttatcgctgg aagatccttc cagggggcac accgccataa tgcctaaacg cttttacggc
      781 acaggcctac cggacatcga gttagcgctg ctgaagggga aactgatcgt catcgagggg
      841 gccgacggct ctgggcgctc gacgcagatt gccatactcc gtaactggct tgagcggctg
      901 ggttatccca cggccgagat tggcctgaag cgctcgaccc tagtgggtcg cgaactcgag
      961 gaggccaaac agggtcacat cctgagcccg ttgaccttca gcctgtttta tgccaccgat
     1021 tttgccgacc agttggaaaa catcatcatt ccggccttac gcgctgattt catcgtccta
     1081 gccgatcgtt acatctacac cttgatggcc cgtgatattg tgcgtggtgt cgatccccaa
     1141 tgggtcaaag aggtctatag catcgcgctc atgcccgacg cagtgttcta cttgcaagtg
     1201 agcccgcagg gtttggcgga
//
LOCUS       DASQSL010000089         3868 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_179275, whole genome shotgun sequence.
ACCESSION   DASQSL010000089 DASQSL010000000
VERSION     DASQSL010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3868
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179275"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(21..1763)
                     /locus_tag="VE844_00895"
     CDS             complement(21..1763)
                     /locus_tag="VE844_00895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008930970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HZB99960.1"
                     /translation="MKKRTTATLLNSRGRLLLSLFAIAAAALVWRAAYLQLTHKDFLQ
                     NHGDARYLRTVAIPAHRGVIMDRYGEPLAVSTPVSSVWAMPRQLASAPAQWPKLADVL
                     DLRVGHLKALIEPRIHREFVYLKRRVDPMVARQVMDLGIRGVSLQSEYRRYYPMAEVT
                     AHLLGFTNIDDSGQEGVELAFDGHLRGTPGAKRVIKDRLGQSVKNVESIRAPKPGQDL
                     ILSIDKRLQYVAYRELKAGVQRHQARAGSIVILDTQSGGILAMVNQPSYNPNNRNGLK
                     GEHFRNRAVTDVFEPGSTIKPFTVAAALETGAYAPSTRIDTHPGYFRVGRHTIKDLHN
                     YGVLDVLGIIKNSSNVGATKIALSLEPDTIWRLFNRLGFGGYTAIGFPGEAPGYLRDH
                     HEWRALERATLAFGYGLSVTTLQLAQAYLILATDGIALPLTLERRLRLLEGERILAPR
                     TAQQVRAMLEEVVRDGTGTRARIAGYRLAGKTGTVHKPSRRGYAEHRYVALFGGMIPA
                     SKPRLVAVVMVDEPRGGDYFGGMVAAPIFAQVMRDAVRLMNIPPDALPVSKRPSRAYM
                     AAAPSVDPASRMRP"
     gene            complement(1764..2018)
                     /gene="ftsL"
                     /locus_tag="VE844_00900"
     CDS             complement(1764..2018)
                     /gene="ftsL"
                     /locus_tag="VE844_00900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018232393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HZB99961.1"
                     /translation="MLSFGLILLVFISAIAVVLARHQSRKLFAELQGLEQQRDAMNEE
                     WGQLQLEQATWGTHSRIEDVARRKLGMTVPPAEAIMVITP"
     gene            complement(2027..2932)
                     /gene="rsmH"
                     /locus_tag="VE844_00905"
                     /pseudo
     CDS             complement(2027..2932)
                     /gene="rsmH"
                     /locus_tag="VE844_00905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008291175.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
     gene            complement(2958..3416)
                     /gene="mraZ"
                     /locus_tag="VE844_00910"
     CDS             complement(2958..3416)
                     /gene="mraZ"
                     /locus_tag="VE844_00910"
                     /inference="COORDINATES: protein motif:HMM:TIGR00242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0051302 - regulation of cell division
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HZB99962.1"
                     /translation="MFCGLSTLSLDDKGRLAIPSRYRERLNALCDGQLMLTPNPLDRC
                     LWLYPWTEWELIDAKLQTLSDFDKQSRRTKQMMQGYAAECELDKQGRIRIPELLCEFA
                     EIKKQVVLLGQGNKFEVWDEARWLQQRDEWLQQLGKQTGEASELLRSLAL"
BASE COUNT          864 a         1162 c          984 g          858 t
ORIGIN      
        1 accgtgtcgg atcggcgctc tcatggccgc atcctcgaag ccggatccac ggagggcgca
       61 gctgccatat aggccctcga cggccgttta gacacgggta aagcatccgg cggtatattc
      121 atcaatcgca ccgcatcgcg cattacctgt gcgaaaatgg gggctgcgac catgccgccg
      181 aagtagtcac cgcccctcgg ctcatccacc atcactacgg ccactaaacg gggtttgctg
      241 gccgggatca tgcccccgaa caaggcgaca tagcgatgct ctgcataacc tcttcggctt
      301 ggcttgtgga ccgtgccggt tttgccggcc agccggtacc ccgctattct cgctcgagtc
      361 ccggtcccgt ctctgaccac ctcctcgagc atggcacgga cttgctgcgc cgtcctcggc
      421 gccaggatgc gctcgccctc gagcagcctg aggcgccgtt ccagtgttaa aggcagcgct
      481 atgccgtcgg tcgccaagat caagtaagct tgagcaagct gtaaggtcgt caccgagaga
      541 ccgtagccga aggccagggt ggcccgctcg agcgcccgcc actcgtgatg atcgcgcaaa
      601 tacccgggcg cctcacccgg aaaaccgatc gccgtgtagc cgccaaaacc caagcggtta
      661 aacaaccgcc agatggtgtc gggttccaat gacaaggcga tcttggtagc gccgacgtta
      721 cttgagtttt tgataatgcc caagacatcg agcaccccat aattgtgcaa atcctttatt
      781 gtgtggcgtc ctacccggaa atagcccggg tgggtatcga tccgggtaga aggcgcatag
      841 gcgcctgttt ccaaggcagc cgccacggta aagggtttga tggtggaacc cggctcaaat
      901 acatcggtca cggcccggtt acggaagtgc tcgcccttta atccattacg attattaggg
      961 ttataagagg gttggttcac catcgccaag atcccgccgc tttgggtatc caggatcacg
     1021 atggagcctg cgcgagcctg gtgccgctgc acccccgcct tgagctcccg gtaggccaca
     1081 tactgaaggc gcttgtcgat gcttaagatg agatcctggc ccggcttcgg cgcgcgtatg
     1141 ctctcaacgt tcttaacact ctgtcccagc cggtccttga tgactctttt ggcgccaggc
     1201 gtgcctctta aatgcccgtc aaaagccagc tcgaccccct cctgcccgct atcatctata
     1261 ttagtaaatc caagcaggtg ggctgtcacc tcggccatcg gataatagcg gcgatattcg
     1321 ctctgtaacg ataccccgcg gatccctaag tccataacct gcctcgctac catgggatca
     1381 acacggcgct tgaggtaaac aaactcgcgg tgaatacgag gttcaatcaa agccttgagg
     1441 tgccccacgc gcaggtcgag cacatccgcc agcttcggcc actgtgctgg agcgctcgcc
     1501 aactgccgtg gcatcgccca caccgagctg accggcgtgc tgacggccaa gggttcacca
     1561 tagcggtcca taatcacccc ccggtgagcc gggatggcta ccgtgcgaag gtagcgagca
     1621 tcaccatgat tctgcaggaa atccttatgc gtgagctgaa gatatgcggc acgccagaca
     1681 agcgccgccg ccgcgattgc gaataggctc agcagcaggc gtcctcggct atttaataaa
     1741 gtcgctgttg ttcttttctt catttagggt gtgatcacca taatggcctc ggcgggcgga
     1801 accgtcatac cgagcttgcg gcgggcaaca tcttctatcc ggctatgggt cccccaagtc
     1861 gcctgctcaa gctgtagttg gccccattcc tcattcatcg catcccgttg ttgttccagc
     1921 ccctgcaatt cggcaaataa ctttctgctt tggtgcctgg ccagcacgac cgcgatcgcc
     1981 gagataaaaa ccaggaggat caaaccgaag ctgagcatag agcacctcat gcaagtctct
     2041 ctgctacccg caatagagcg ctgcgggcgc gaggattgtt cataacctcc catcgggagg
     2101 cccggaattt acctataagg cgtaaggcgg gatgccgctt ttcagcaagc gctgccactc
     2161 gataatcacc accacgcgcc tgatcgcgca taaaccgttt cacgatccga tcctccagcg
     2221 aatgaaaact gatccctaaa agacgccccc caggagccag aaccctcacg gcctgcggca
     2281 aagccacgct caactctgct aattcctggt tgaggaatat ccggatggcc tgaaaacatc
     2341 ttgtcgcggg atgtgtccgc tgctgcacgg gacttgcccg ggcaatgatc gccgccagtt
     2401 gccaggtggt ggtaatcggg gtagtacggc gtgctttgac aatagctcgg gcgatacgct
     2461 tggcaaatcg ttcctcgcca aagcgccaca cgatctccgc tatttcctct tgatgcgctg
     2521 ttgctagcca ctcggcggca ctctttcccg ctgttgggtc catgcgcata tccaagggcc
     2581 cctcgtggag gaaactgaat cctcgggcag gcacctccaa ctggggggaa gagaccccca
     2641 gatcaaatag gatcccattt acctttccgc tgatgccgct tcgctctgct agacgttcaa
     2701 gcatggtaaa tgacccacgc tcaatggtaa aacggggatc gcgctcgtgc agatcacggg
     2761 cgacttcaac ggcctccgga tccttatcga tagccagcaa ccctcccctt tcatcgagtt
     2821 tgctcaatac cgcgcgggca tgtcctccac ggccaaatgt acaatcgaca tagatacctc
     2881 ccttaacaat cctaagatgc tcaagcacct cttctaaaag taccggcctg tgcgctccct
     2941 tttcactgca ttcatagtta tagggccagg ctccgcaaga gttccgaggc ttcccccgtt
     3001 tgcttgccaa gctgctgcaa ccattcatca cgctgttgaa gccagcgcgc ctcatcccat
     3061 acctcgaatt tattgccttg cccaaggagc accacctgct ttttgatctc ggcaaactcg
     3121 cataatagct ccgggatacg gatcctgccc tgtttatcca gctcacactc cgcggcatat
     3181 ccctgcatca tctgtttggt acgccggctc tgcttatcaa aatcggacag cgtctgtaat
     3241 tttgcgtcga tgagctccca ttcagtccat ggatagagcc ataaacagcg atcgagggga
     3301 tttggagtaa gcattaattg cccgtcacac agagcattca atcgttctcg ataccggctt
     3361 ggtatggcca atcggccttt atcatctaaa ctgagcgtgc ttaatccgca aaacacccac
     3421 tacccacccc ggccgcttta acccacaatt ccccactttc tcccacaggt gcagatcact
     3481 atagatgttc ttcctaagat gtcaaggcat attcagcggg atttttgaag taattctttc
     3541 tttttggaca gtaagttatg atataatggt ataattgcca ttaatatatt aaaaataata
     3601 cttattgatc atcaagatag atataagaat gtagattatg tattaaaaag cttatgcagc
     3661 tagtggggcc gcatcggtaa agggggatat cagggatgga aattagagtt aaacaacgac
     3721 cgtgtagcgt agggctacac aggctgaacc ccctcccccc taaaggggag ggggcgaggg
     3781 ggaggggcat aaatgaccta tcaaaaccac gttggcatag cactaatctc catgagcgct
     3841 taggcgttct ccttgggcag caccctac
//
LOCUS       DASQSL010000090         2636 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_55598, whole genome shotgun sequence.
ACCESSION   DASQSL010000090 DASQSL010000000
VERSION     DASQSL010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2636
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55598"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..599)
                     /locus_tag="VE844_00915"
     CDS             complement(<1..599)
                     /locus_tag="VE844_00915"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HZB99963.1"
                     /translation="MKRFIIPMLAVVALSFAAFSVVRTQPVRKPEPPPSPPPATPFAH
                     AVAAVGLVEANTENIALGTHLSGVVEQVYVTVGQAVKAGEPLFKLDDRHLQAELAVRQ
                     TQLRTAKARVKAAEATLGDATQQLHFAEGITNPRAISSEELARRRYAVRIAAAQLQEA
                     KATVTVAEAQIKAVQTEIERSTVWAPVDAEVLQVKLRAG"
     gene            complement(596..1375)
                     /locus_tag="VE844_00920"
     CDS             complement(596..1375)
                     /locus_tag="VE844_00920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006893210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZB99964.1"
                     /translation="MNAEKTAVRCRGLRKEFSSGETQALVLRNVDLDVPLGEMTFLVG
                     PSGSGKTTLLSVIAGLLDASGGELEVLSKHVHRMPSQERIRFRRQYLGFIFQQYQLLP
                     ALTAAENAAVPLLAARVNRHTAIAQAVALLEELGIGARAHALPAQLSGGQQQRVAIAR
                     ALIHEPRLILCDEPTAALDAETGHAVIELLAEIALRPDRAVIVVTHDNRIFDFADRIA
                     FMEDGHIVRIEAKPDRHAIQWRDRYETRQLPLQVLSAGGNL"
     gene            complement(1380..2519)
                     /locus_tag="VE844_00925"
     CDS             complement(1380..2519)
                     /locus_tag="VE844_00925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012909956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZB99965.1"
                     /translation="MNFVALKMLMGDRAKYLSLIFTIAFASFLLANQVSIFSNIMLRT
                     ASQIVDVPDADLWVMDRETQYFDESKALTENDLYRIRGVPGVAWAVRLYKGVARATAP
                     DGKFRQVVLMGLDDATLVGAPRKMLLGRFEDLQAPDAVIMDRAGYVYFFPNEPLALGK
                     TFEFNDRRAKLVGIAEASAPFATFPVFFTRYSQALNYVGRERNLLAYVLVKAQPGVSL
                     DKLSARIESSTGLRAVSTEGFKWQTIGFYLNNTGIPVNFGITIGLAFLVGAVVAGQTF
                     YLFTLENLKQYGVLKAVGVTDRRIIGMILLQAVMIGTLGYSIGMGMAAVFFEVTLNYL
                     PTRGIVLMWQAGVGTGLTVLVIIVLASLLSLRRVLVLEPAIVFRG"
BASE COUNT          564 a          778 c          782 g          512 t
ORIGIN      
        1 tcaccggcgc ggagtttcac ttgaagcacc tctgcgtcca cgggtgccca caccgtgctg
       61 cgctcgatct ctgtttgcac cgctttgatc tgtgcttcag ccacggtgac ggtagccttc
      121 gcttcctgca gctgggcggc ggcgattctc actgcgtagc ggcgacgggc cagctcttca
      181 gaactgatgg cccgggggtt agtgatcccc tcggcaaagt ggagttgctg ggtcgcatcg
      241 ccaagggtag cctccgcggc cttgacacgc gccttggcgg tgcgaagttg cgtttggcgc
      301 acagcaagct cggcctgcag atgcctatca tcgagcttga acaggggctc gccggccttc
      361 acggcttgcc cgacggtaac gtagacctgt tccacaacac ctgagagatg tgtgccaagc
      421 gcgatgttct cggtgttggc ctcaaccagc cccaccgcgg cgactgcatg ggcgaatggt
      481 gtcgcgggtg gtggtgaagg gggaggctcg ggcttgcgta ccggctgggt gcgcaccacc
      541 gaaaatgctg caaagctcag agcgaccaca gctaacatgg gaataatgaa tcttttcata
      601 ggtttcctcc tgcagataac acttgcaaag gcagctgcct tgtttcgtac ctatccctcc
      661 actgaatcgc atgtcgatca ggtttagcct ctatgcggac gatatgcccg tcttccataa
      721 aggcaatgcg gtcggcgaag tcgaagatac ggttatcgtg ggtcaccaca atcaccgccc
      781 gatcggggcg gagggcgatc tcggcgagga gttctatcac cgcatgtcca gtctcagcgt
      841 cgagggcggc ggtaggctca tcgcacaaga tcaggcgagg ctcgtggatc aaggcccggg
      901 caatggccac gcgctgttgc tgcccgccgg agagctgagc gggaagggcg tgagctcgtg
      961 cccctatgcc aagctcctcg agcaaggcca cggcttgcgc aatagcggta tggcgattta
     1021 ctcgagcggc gagcaagggc acggccgcat tctcggcggc cgtgagtgct ggaagcaatt
     1081 ggtattgctg gaagatgaaa cccaggtact gacggcgaaa gcgaatgcgc tcttgactgg
     1141 gcatcctgtg tacgtgcttg ctcagcactt cgagctcgcc accgctcgca tcaagcagtc
     1201 cagcgatgac cgacagtagc gtggtcttgc ccgagccgct tggcccaacc agaaaggtca
     1261 tctcacccag tggcacatcc agatccacat tccgcaacac cagcgcttgg gtctcaccac
     1321 tgctaaattc cttacgaagt ccacggcaac ggacagcggt tttttcggcg ttcatggtct
     1381 tatccccgga acacgatagc aggttccaac accagcaccc gccggaggct caagaggctt
     1441 gccagcacga tgatcacgag caccgtaagg ccggtgccca ccccggcttg ccacatcagc
     1501 acaataccgc gtgttggcag gtagttcagg gtgacctcga agaacaccgc ggccattccc
     1561 atgccaatcg aatagccgag agtgccaatc atgaccgcct gtagtaggat catgccgatg
     1621 atgcgccggt cggtgacgcc aacagccttg agcacgccat actgtttcag gttttcgagt
     1681 gtgaagaggt agaaggtctg tcccgctacc accgctccca ccagaaacgc gagcccgatg
     1741 gtgatgccaa agttcacggg aataccggtg ttgttgagat agaaaccaat ggtctgccac
     1801 ttgaaccctt cggtggacac agcgcgcaga ccggtcgagg actcgatgcg cgcgctgagc
     1861 ttgtccaggg agacaccggg ctgggctttc acgagcacgt aggccaagag attgcgctcc
     1921 cggcccacgt agttcagtgc ctggctgtag cgggtaaaaa atactggaaa cgtggcgaac
     1981 ggcgcggagg cctcggcgat acccacaagc ttggcgcgcc ggtcattaaa ttcaaaggtc
     2041 ttgccgagcg cgagcggctc attgggaaag aaatagacgt aacccgcccg gtccatgatc
     2101 acagcgtcgg gggcctgcaa atcctcaaag cggccgagca gcatcttgcg gggtgcgcct
     2161 accagcgttg catcatcgag gcccatgaga accacctggc ggaacttccc atcaggggcc
     2221 gtggcgcggg caacgccctt gtagagcctc acggcccacg ccacacctgg cacaccacgg
     2281 atccggtaga ggtcattctc agtaagggcc ttgctttcgt cgaaatattg cgtctcccga
     2341 tccatgaccc agagatcggc atcgggcacg tctacgatct gactggccgt gcgcagcata
     2401 atattggaga agatggacac ctgattggcc agcagaaacg aggcgaaggc aatggtgaag
     2461 atcaggctca gatatttggc ccggtctccc attaacatct tgagtgcgac gaagttcatt
     2521 tcagctacct ccacgtgacg aggcatgggt gttaataata cgattcaact ccccgaagac
     2581 tttgggcacc ggccatccca gggccaacgg gtcgcctggc cacaaaatat taaata
//
LOCUS       DASQSL010000091         1079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_138007, whole genome shotgun sequence.
ACCESSION   DASQSL010000091 DASQSL010000000
VERSION     DASQSL010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138007"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1040)
                     /locus_tag="VE844_00930"
     CDS             complement(<1..1040)
                     /locus_tag="VE844_00930"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZB99966.1"
                     /translation="MSIRIQLRSATVKALQTRLQHAYQKDAVRLVRRTTVLIDWLVHH
                     VPVEVLHEGWGVSPSTLYAWRKAFLVRGLDSLVYRHGGGRPEKLTPTQKKRLVELLDA
                     GPLVVGFETACWNSVLIGVLIGREFGVLYNRHYVCTLLHHLGFSFQKARFVSDPLDEA
                     KRQAWLHDTWPAILRAAKRRKGMILFEDEASFAQWGSLSYTWARRGRQPEVPTSGKRK
                     GYKVYGAIEYFSGRLFYQGIEGRFNSESYQAFLQMIMRQSRQHLFLIHDGARYHTSQS
                     TQLFFETHHQRVTAHRLPSYSPDYNPIEYLWKKTKQRGTHNKYFPEFAVLIGSVEEAL
                     AYFSTHADEVLCL"
BASE COUNT          241 a          317 c          303 g          218 t
ORIGIN      
        1 agacacagca cctcgtcggc atgcgtcgaa aaataggcca acgcttcctc taccgacccg
       61 atcaataccg caaattccgg gaaatactta ttatgggtcc cgcgctgctt cgtcttcttc
      121 cacaagtatt caatcggatt gtaatccggg gaatacgacg gcagccgatg ggctgtcacc
      181 cgctggtgat gggtctcaaa aaagagctgg gtcgactgac tggtgtgata ccgggcccca
      241 tcatggatca gaaacagatg ctggcggctt tgtcgcatga tcatctgcaa aaacgcctgg
      301 taactctcgg agttgaaccg cccttcgatg ccctgataga acagacgccc cgagaaatac
      361 tcaatggcgc catacacctt gtagcctttg cgcttgccac tggtggggac ttcgggctgc
      421 cgaccccgcc tggcccaagt gtaacttaag gagccccact gcgcgaagct cgcttcatct
      481 tcaaacagga tcatcccttt gcggcgtttc gcggcccgca gaatggccgg ccatgtgtcg
      541 tgcagccagg cttgccgctt ggcctcgtcg agagggtccg agacaaagcg ggctttttga
      601 aacgaaaagc ccagatggtg gagcaaggta cagacataat gccggttgta gagcacgcca
      661 aactcccgcc cgatgagcac gccgatgagg accgaattcc aacaggcggt ctcaaagccg
      721 accaccagcg gcccggcatc gagcaactcg accaggcgtt tcttctgcgt cggggtcaac
      781 ttctcggggc gaccgccgcc atggcggtag accaggctgt ccagaccccg taccaagaag
      841 gctttgcgcc acgcatagag cgtcgagggg cttactcccc agccctcatg caagacttcc
      901 accggcacgt gatgcacgag ccaatcgatt aataccgtag tgcgtcggac caagcgcaca
      961 gcgtcctttt ggtaggcgtg ctgcaatcgg gtctggaggg ctttgacggt ggccgagcga
     1021 agctgtattc tgatgctcac gggtgtatcc tcccagttaa agggtttgga aaatagatt
//
LOCUS       DASQSL010000092         1097 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_124356, whole genome shotgun sequence.
ACCESSION   DASQSL010000092 DASQSL010000000
VERSION     DASQSL010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124356"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            372..590
                     /locus_tag="VE844_00935"
     CDS             372..590
                     /locus_tag="VE844_00935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99967.1"
                     /translation="MVQGWIVTDAATLARLTFPDDETIVEIPAALLDHLAADGLDGEV
                     MNIMPPIVSVMSNGNYIIQGKRLPTLRR"
     gene            674..>1097
                     /locus_tag="VE844_00940"
     CDS             674..>1097
                     /locus_tag="VE844_00940"
                     /inference="COORDINATES: protein motif:HMM:NF045158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99968.1"
                     /translation="MEPISAERRRQLLTTFQREVVHLEMRDVYATDVERDRFATWLRG
                     ELLDPEAEAEWWRPWFEPMRRNNEAGKTLRRLRIVSEPVTAYIRFEWLDAAQLVRAGE
                     DVRWLPRCNASELLLPGNDFWMFDRQTVVFTHFSGDGNP"
BASE COUNT          233 a          295 c          331 g          238 t
ORIGIN      
        1 actatcagta gtggaggtca tattcgtaac gttagggccg aactcggctt cctggaggaa
       61 agttgcggca tgttgctcga actaagcttc aagatgctca gagtagggct tgggaggccg
      121 atacattgag cgggctagcg aaagattttt tcatctacgc ttcgtccttg gcgcctcctg
      181 gctctgacct ggggcagggc cctacggcgg ggtgctcttg acacgttgct cgttgaagcc
      241 caggctggtc tcggctaatg caacgttcag caagcttctg ataggagaag gactgtgaag
      301 ctaaagtatc tcggtaaaac tcgacgccag acgactcacc aaccttgtac gcgaccgacc
      361 agggttccta agtggtacag ggatggatcg tcaccgacgc cgccaccctg gcccgactca
      421 cctttcccga cgacgagacc atcgttgaga taccagccgc gttgctcgat cacctcgcag
      481 cagacggcct ggacggtgag gtgatgaata tcatgccgcc tattgtcagc gtcatgtcca
      541 atggcaacta catcatccaa ggcaaacggt taccgacgct gaggcgctga accagatgaa
      601 catccggagc atgagacctg cgtgcaggtc accaagtcag ccgtcgtccc actgcttgtt
      661 ggagggtagg atcttggaac cgatctcagc ggaaaggcga cgccagctcc tcacgacgtt
      721 tcagcgtgaa gtcgtgcatt tggagatgcg cgacgtatat gccacagacg tcgagcgaga
      781 tcgattcgca acatggttac gcggcgagct gttggatcct gaggcggaag ccgaatggtg
      841 gcggccttgg ttcgagccga tgaggcgcaa caacgaggca ggtaagacgc tgcgcaggct
      901 gcgcatcgtc tccgaaccgg tcaccgccta catccggttt gagtggttgg atgcggcaca
      961 gcttgttcgt gccggtgaag atgtccgatg gttgcctcga tgtaacgcgt cggagcttct
     1021 gctgccgggt aacgactttt ggatgttcga tcgccagacg gttgtgttca ctcatttctc
     1081 cggtgacgga aatcccg
//
LOCUS       DASQSL010000093         3902 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_55639, whole genome shotgun sequence.
ACCESSION   DASQSL010000093 DASQSL010000000
VERSION     DASQSL010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3902)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3902)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3902
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55639"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..143)
                     /locus_tag="VE844_00945"
     CDS             complement(<1..143)
                     /locus_tag="VE844_00945"
                     /EC_number="3.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002208663.1"
                     /note="hydrolyzes phosphatidylglycerophosphate to produce
                     phosphatidylglycerol and phosphate; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HZB99969.1"
                     /translation="MMRPKPCELITDPGHLIAFGFGSGLSPWAPGTMGSLAAIPLYLG
                     LART"
     gene            complement(619..2352)
                     /gene="ptsP"
                     /locus_tag="VE844_00950"
     CDS             complement(619..2352)
                     /gene="ptsP"
                     /locus_tag="VE844_00950"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013031419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HZB99970.1"
                     /translation="MIRLQGMGVSRGIAIGKVHILERDQLEITEYSIDEDKIEREIHR
                     FRNALALARQQLRAIRDHIPWSTAADIAAFIDTHLLMLEDSALAQEPIRLITEYRCNT
                     EWALKLQHDALVAVFEEMDDAYLRARKDDVSHVVNRIQRILLKQAPLRHEVLDNRLRG
                     YIILADDLTPADTVLMQHHGIAAFATEYGGPTSHTAILAHSLDIPSIVGLHHARRYVR
                     EDDLLILDGGKGVVWVSPDEATLTYYRGLQQEEKAYYAELIKLKGAPAITEDGQIIKL
                     QANIELHKDFDAVRAVGAAAVGLYRTEFLYMNREHPPDEEEHFETYREVLRALGNIPI
                     TIRTLDLGADKQPNGAGRREGPVAANPALGLRAVRWCLQDQSLFLPQLRAILRASACG
                     PIRLLIPMLSNLQEFDQILKIIEAIRVDLRSRSIDFDPLMPIGGMIEVPAAAICADIF
                     AQHLDFLSIGTNDLIQYTIAIDRVNDEVSYLYDPLHPAVLRLIRRIIEAGAEANKPVA
                     MCGEMAGDPRYVRLLLGLGLREFSVHPAVLLEIKRIINSSRIDRLEPLALQALQSSSR
                     AEIHALVEQID"
     gene            complement(2352..2621)
                     /locus_tag="VE844_00955"
     CDS             complement(2352..2621)
                     /locus_tag="VE844_00955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013219370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HZB99971.1"
                     /translation="MVRREVIIANKLGLHARAAARLVQLASSFGSEIKIGRNGKEVNG
                     KSIMGVMMLAASRGSPIEIVASGEDEEQAVHSLEELIINKFGEPE"
     gene            complement(2628..3023)
                     /locus_tag="VE844_00960"
     CDS             complement(2628..3023)
                     /locus_tag="VE844_00960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018717621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HZB99972.1"
                     /translation="MSVGLLIISHEEIGRALIQTVIQTLGNSPLPVEILSVPKECYPE
                     ALAEHARKAAALLDHGAGVLVLTDMYGATPSNIATRLINGARIRIVTGLNLPMLMRVL
                     NYSQLGLDQLAEKAVSGGREGVFLVARET"
     gene            complement(3033..3896)
                     /gene="rapZ"
                     /locus_tag="VE844_00965"
     CDS             complement(3033..3896)
                     /gene="rapZ"
                     /locus_tag="VE844_00965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006474660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HZB99973.1"
                     /translation="MERRLIVVTGLSGAGKTVVLNALKDLDYYCIDNLPIGLLIEFYQ
                     HIWERYHPFYQYVAAGIDARNPRGLLAKFPNILHDLGSPDLLTAELVFVEATEETLVR
                     RFSETRRKHPLSSERVSLAEAIDQERQLLGSLCEQADLRIDTSRTSVNQLWNYVKERV
                     AQRPKATLSLQLTSFGFKQGVPRDADFVFDVRCLPNPHWETHLRHYSGRDAQVIAFLE
                     QSPRVGQMIQSIAAFLDRWIPTFEAENRSYLTVAIGCTGGYHRSIYIVDRLSAHFSEQ
                     GKKILVSHRDM"
BASE COUNT          885 a         1116 c         1080 g          821 t
ORIGIN      
        1 gtacgcgcga gacccaggta gagaggtata gcggcaagcg atcccatcgt gccgggtgcc
       61 caagggctca ggcccgatcc aaatccaaag gcgatcaagt ggccgggatc ggtaataagc
      121 tcgcatggct tgggcctcat catgaatcga ccatttgcac gaaagccagg cgccccccct
      181 cttcgcgcgt gagcaggatc tgttgaccct cctgcagttg catagggtta cccggtggac
      241 agggggtccc cgtcgtaaca tccatcaaat cgcggactac tgaccagctg ttccgcaacg
      301 aatcgcacgg aggtttgcac tgtgagttgg gaacccctgc gagaatactg ggcgctaccg
      361 gcaccgtccg ctaccgccaa ggcgtgccac cctgaattgg gacggcgtga agggcgtaat
      421 cgtcgtcacg aaatgcgccc acatgcgcgt gggaacgccc cccgtctact tgccgcaacc
      481 agcgttcgtc ctgtacctgg acacgactgc ggtggtgcca tgtcaggttt ggcataggga
      541 tcagtctgat ctgaagggac gtctttccag agggattggg gatccgggtt aaccaggaga
      601 gttatctctt gtagtcgatc aatcaatctg ctcaacgagg gcatggatct cggccctgct
      661 gctactttgc agcgcctgca gggccagggg ttcgagccta tcgatacggc tgctgttgat
      721 gatgcgcttg atctccagca acaccgccgg gtgaacgctg aattccctga gtcccaggcc
      781 cagaagcagg cggacatagc gaggatcacc ggccatctcg ccgcacatag ccacaggctt
      841 attagcctcg gcaccggctt cgatgatcct acggatcaat cgcaataccg ccggatgcag
      901 gggatcgtac agatagctga cctcatcgtt gacccgatcg atggcgatgg tgtactggat
      961 gagatcattg gtgccaatgg agagaaaatc gagatgctgg gcaaatatat ccgcgcagat
     1021 agccgctgcc gggacttcaa tcattccgcc gatcggcatc aagggatcga aatcaatgga
     1081 tctggaccgc agatccaccc ggatcgcttc tattatcttt agaatctgat cgaactcttg
     1141 gaggttcgat aacatcggaa tcaaaagccg gatcggccca caggccgagg cccgcaagat
     1201 agcccggagt tggggcagaa acagcgattg atcttgtaaa caccagcgca cagcccgtag
     1261 acccaaggca ggattagccg caaccggtcc ctcacggcgc cctgctccat tgggctgttt
     1321 atcggcgcca agatccaggg tacggatggt gatggggata ttcccgagcg cccgcaacac
     1381 ctcacggtag gtctcgaagt gttcttcctc gtcggggggg tgttcccgat tcatgtaaag
     1441 gaactcggta cgatacagcc ccactgctgc cgctcccaca gcacggacgg catcaaagtc
     1501 cttgtgcagt tcgatattgg cctgaagctt gattatttgg ccatcctcgg tgatggcggg
     1561 cgcacccttg agtttgatca gttcggcgta ataggccttc tcctcttgct gcaacccgcg
     1621 ataataggta agggtagctt cgtctgggga cacccaaacc acccccttgc cgccgtcgag
     1681 gatcaagaga tcgtcttccc gaacatagcg ccgggcatga tgcaaaccca caatgctggg
     1741 gatatccagg ctgtgcgcaa gtatcgcagt gtgtgaggta ggacccccat actcggtggc
     1801 gaatgcagcg atcccgtggt gctgcatgag cacggtatcg gccggggtca gatcatcggc
     1861 caggatgata tagccacgca aacggttatc gaggacctca tgacgcaggg gcgcttgctt
     1921 gagcaggata cgctggatcc gattcacgac gtgactgaca tcatccttac gcgccctaag
     1981 ataagcatcg tccatctctt caaacacggc cacgagcgcg tcgtgctgga gtttgagtgc
     2041 ccattcggtg ttacagcgat actcggtgat caagcggatg ggttcctgag ccaaagccga
     2101 atcctcgagc atcaacaggt gggtatcgat aaaggcggcg atgtctgcgg cggtcgacca
     2161 gggaatatga tcccgaatgg cgcgcaattg ctgacgagca agcgccagcg cgtttctgaa
     2221 gcgatggatc tcacgctcaa tcttatcctc atcaatggaa tactcggtga tctcgagctg
     2281 atcccgctca aggatatgga ccttgccaat ggcaattccc cgagacacac ccatgccctg
     2341 gagccggatc attactcggg ttctccaaat ttattgatga tcaactcctc aagcgaatgc
     2401 acagcctgtt cctcatcctc acccgaggcc acgatctcga tggggctccc tctagatgcg
     2461 gccagcatca tcacccccat gatactcttg ccattgacct ctttgccgtt gcgtccgatc
     2521 ttaatctccg atccaaagct cgaagccagt tgtaccaacc gcgcggcggc acgggcatgc
     2581 aaaccgagct tgttggcgat gatgacctct cgcctgacca tattccccta tgtctcccga
     2641 gcgactaaga ataccccctc acgcccgccg ctgaccgctt tttcggcaag ctggtcgaga
     2701 ccgagttggg aataattcaa aacccgcatc agcatcggca gattgagtcc cgttacaatc
     2761 cgtattctag cgccatttat gagtcgtgtg gcgatattgc tcggtgtcgc cccatacata
     2821 tcggtcaaca ccagcacgcc cgcgccatga tccagcaaag ccgctgcctt gcgcgcatgc
     2881 tcggccagcg cctccggata acactccttg gggacactca ggatctcaac gggcaaagga
     2941 gagttcccga gggtttgaat gaccgtttgg atcaatgccc tgccgatctc ctcatgactg
     3001 atgattaaca agccaacgct catcggtggg tctcacatat cccggtgaga aaccaagatc
     3061 tttttaccct gctcactgaa atgggccgag agccgatcga cgatataaat cgatcggtgg
     3121 taacccccgg tacagccaat agcgaccgtg agatagctgc ggttttcagc ctcaaacgtg
     3181 gggatccagc gatccaaaaa ggcggctatc gactggatca tttggcctac ccggggagac
     3241 tgttcaagaa acgcgatcac ttgcgcatca cggcctgaat aatgccgtag gtgagtttcc
     3301 caatgcggat tggggaggca gcggacatcg aagacaaaat ccgcatcccg cgggacgccc
     3361 tgcttaaacc caaaggaagt gagctgcaat gagagggtgg ccttaggacg ttgggcgacc
     3421 cgctccttga catagttcca taattgattc accgaggtgc ggctggtgtc gatccggaga
     3481 tcggcctgtt cgcataggga acccagtagt tgccgttcct gatcgatggc ctcggcgaga
     3541 gatacccttt ccgaggataa gggatgctta cggcgggtct cgctgaaccg ccggaccagg
     3601 gtctcttcgg tagcctccac gaacacaagc tctgcggtga ggagatcagg ggaacctaga
     3661 tcatgcagga tatttgggaa tttcgccaag agcccgcggg gattgcgtgc atcgatgcct
     3721 gctgctacat actggtagaa aggatgatac ctttcccaaa tatgttgata aaactcaatc
     3781 aagaggccta taggcagatt atcgatacag tagtaatcga ggtctttgag ggcattgagc
     3841 accacggtct tgcccgcacc cgacagtcct gtcaccacaa tcagtcgtct ctccatcagc
     3901 gc
//
LOCUS       DASQSL010000094         1460 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_55657, whole genome shotgun sequence.
ACCESSION   DASQSL010000094 DASQSL010000000
VERSION     DASQSL010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1460
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55657"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1262
                     /locus_tag="VE844_00970"
     CDS             <1..1262
                     /locus_tag="VE844_00970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015328877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS481 family transposase"
                     /protein_id="HZB99974.1"
                     /translation="VNRYLKQWGLDRGTLMRQPPAVRFQARYSNQCWQFDLSPSDMKQ
                     LPAPPWLDAGRGALQLMLYSVVDDRSGVAYQEYHCVYGEDVEAALRFLFNAMAPKAID
                     GFPFEGIPEMLYVDSGPITKSLIFQHVMSYLGIEVRPHMPQGSDGRRPTARAKGKVER
                     PFRTVKEMHETLYHFHVPETELEANAWLLNFLLRYNHMQHRTEPHSRFEDWLDNLPPT
                     GIRKMCGWERFCTFAREPERRKVGVDARVSAEGTMYAVDPELAGETVVLWWGLFDNEL
                     YVEHGEERFGPYHPIGGPIPLHRYRRFKKSKLQQRADRIEALAAQLHLSRKALEDRPD
                     VLAPLPGASLSSQPFVDPDPFHEITFPSVIDAKRAIASYLGQPLAKLPPEQLDYINAL
                     VGETLQKQEVMARVRDYFKTIRGKSPC"
     gene            1256..>1460
                     /locus_tag="VE844_00975"
     CDS             1256..>1460
                     /locus_tag="VE844_00975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZB99975.1"
                     /translation="MLSDVINYFGLAREFDQAGYYETAHHQFLLKEIAATIKKGRIIV
                     LAGIVGCGKTKVLLQLQQSLKQED"
BASE COUNT          321 a          444 c          405 g          290 t
ORIGIN      
        1 cggtcaaccg ctacttgaag caatggggct tagatcgggg cacgctcatg cgccagcctc
       61 ctgcggtgcg cttccaagcc cgttattcca atcagtgctg gcagttcgat ctctcgcctt
      121 cggacatgaa gcaactgcca gccccgccct ggcttgatgc aggccggggc gcgctgcagc
      181 tcatgctcta tagcgtcgtc gatgatcgga gtggtgtcgc ctaccaggag tatcactgcg
      241 tctacggcga ggacgtggag gctgccctgc gcttcttgtt taacgccatg gcacctaaag
      301 ccatcgacgg gtttccgttc gaggggatcc ccgagatgct ctatgtcgat tcggggccga
      361 ttacaaagag cctgatcttc caacacgtca tgagctatct gggcattgag gtacgacccc
      421 acatgccgca aggcagcgat gggcgtcgcc cgaccgcccg cgcgaaagga aaagtcgagc
      481 ggccgtttcg taccgtgaag gaaatgcacg agacgctcta ccacttccat gtgcccgaga
      541 ccgaactgga ggctaatgcc tggttgctta actttctact gcgctacaac cacatgcaac
      601 accgtacgga gccacattcc cgctttgaag actggcttga caacctccca cccacgggca
      661 tccgcaaaat gtgcggctgg gagcgtttct gcacgttcgc gcgggaaccc gaacggcgca
      721 aggtcggtgt cgatgcacgc gtgagcgctg agggaacaat gtatgcagtt gaccctgagc
      781 tcgccggcga gactgtagtg ctctggtggg gtttatttga taacgagctg tacgtcgagc
      841 acggtgagga gcgcttcggg ccttatcacc caatcggcgg ccccattccg ctgcatcgtt
      901 accgccggtt taaaaagagc aagctccagc aacgcgccga tcgcatcgag gccttggcgg
      961 cgcaactgca cctttcgagg aaagcgttag aagaccgacc ggatgtcctc gcccctcttc
     1021 cgggcgcttc gctatccagc caaccgttcg tagatccgga cccctttcat gagatcacgt
     1081 ttccgagcgt cattgacgcg aaacgcgcca tcgcaagcta cctcggacag cccttagcaa
     1141 aactgccacc cgagcagctc gactatatca acgcgctcgt tggcgaaacc cttcaaaagc
     1201 aagaggtcat ggcgcgggtg cgggactact tcaaaaccat acggggaaaa tcaccatgct
     1261 aagcgatgtt atcaattact tcggtctcgc ccgcgaattc gaccaggccg gctattacga
     1321 aaccgcacac caccaatttc tgctcaaaga aatcgcggct acgatcaaga aggggcgcat
     1381 tatcgtactc gcgggcatcg ttggctgcgg caagaccaag gtgctgcttc agctacaaca
     1441 gtcgctcaaa caagaggacg
//
LOCUS       DASQSL010000095         1792 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_165273, whole genome shotgun sequence.
ACCESSION   DASQSL010000095 DASQSL010000000
VERSION     DASQSL010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165273"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            267..1682
                     /locus_tag="VE844_00980"
     CDS             267..1682
                     /locus_tag="VE844_00980"
                     /inference="COORDINATES: protein motif:HMM:NF033517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HZB99976.1"
                     /translation="MSPPEGIDSLSREELLALVLQLQHKLIELEASILDLRAEVDRLT
                     REKKRQAAPFSKGTRAQQPKRPGRKPGEGTFSFRQAPRPEEITELPVNVPLIQESCPA
                     CGSELAEERTDFAYVTELPPVPRPQVTQYRVSICRCTGCGRKVRGEHPDLALNQRGAT
                     AHRLGSRAMAAAHALHYQVGIPVRKVPLVLALLTGVELTQGAITQDALRRARGKVGQR
                     YQELRAGVRNAPAVYTDDTGWKVGGENAHLMAFDTNQATVYQVRSRHRHQEVQEIVPR
                     DYQGVMVTDRGRSYEALSFRRVKQQKCLAHLQRTLSEVLAQKKGRARDLAEGTRELLR
                     LAVHSWEEYHWGSRKEFHWWVPEVRFALNYHLRDRPFKDQDNQKLLRMLHHYHQRGDL
                     LRFLEDPSIEPNNNRVERMLRPAVIARKVSQCSKTWSGADAFAAFTSVIQTLLKKGTP
                     SSVVEALADLFGAPISQTAPL"
BASE COUNT          384 a          546 c          511 g          351 t
ORIGIN      
        1 caactaactc agatagattt cttccagttc cttcacccca ccaaaagcaa tccgatccac
       61 tattactgtg ggcagggtca ctgcttccta gtagtggcta aacttcagat tagtctgtac
      121 ggaacaccat cttcttcatt ccagtcatag acagcggctc agaatcgtgg aacaccgctt
      181 cgccagcgct tagccaaagc ttctccacag tacttgatta gcgctggggc ttgtggtcac
      241 tgcggcgata ggttacattg ccagccatga gccctcctga aggcatagac tccttgagcc
      301 gggaagaact gctggctttg gtgctccagt tacagcataa gttgatcgag ctggaagcca
      361 gcatcctgga cctgcgtgct gaagtggacc ggctgacccg agagaaaaag cgccaggcag
      421 cccccttttc taaagggacc cgtgcccagc agcccaagcg tccaggccgc aagcctgggg
      481 aaggcacctt ctcttttcgc caggcaccac gccccgagga aatcacggaa cttccagtga
      541 acgtgccgct catccaggag tcatgccctg cttgtgggag cgagttggct gaagagcgga
      601 cagacttcgc ctacgtcacc gagttgccac ccgtgccccg accccaggtg acccagtacc
      661 gagtgtcgat ctgccgctgc accggctgtg gtcgcaaagt gcgcggcgaa caccctgatt
      721 tagccttgaa ccagcggggg gctaccgccc accggctggg gtcccgggcc atggccgccg
      781 ctcatgccct gcactatcag gtgggtattc cagtgcgtaa ggtacccttg gtgctcgccc
      841 tcctgactgg ggtggagcta acccaggggg ccatcaccca ggatgccctg cgtcgggcca
      901 gaggcaaggt aggacagagg taccaggagt tgcgggccgg ggtcaggaat gctccagcgg
      961 tctacaccga cgacactggc tggaaggtgg gtggagagaa tgctcacctg atggcctttg
     1021 acaccaacca ggccaccgtc taccaggtgc ggtccaggca ccgtcaccag gaggtacagg
     1081 agatagtccc cagggactac cagggggtga tggtcactga ccgaggccgg agctatgagg
     1141 ccctttcctt tagaagggtc aagcagcaga agtgcttagc ccatctccag cgcaccttga
     1201 gtgaagtact ggcccagaag aagggccgcg cccgagatct ggcagagggg accagagagt
     1261 tgctgcggct ggcagtgcac tcgtgggaag agtaccactg gggttccagg aaagagtttc
     1321 actggtgggt gccggaggtg cgcttcgccc tcaactacca tttacgagac agacccttca
     1381 aagaccagga caaccagaag ttgctgcgga tgctgcacca ctaccaccag cggggagatc
     1441 tgctgcgttt cctggaagat cccagtatcg agcccaacaa caaccgggtg gagcggatgc
     1501 tgcggccagc ggtgattgcc cgcaaggtct cccaatgttc caagacctgg tctggggccg
     1561 atgccttcgc cgcctttacc agtgtcatcc agaccctctt aaagaagggt accccctcct
     1621 ctgtggtgga agcactagcc gacctcttcg gcgccccaat aagtcagacc gctccccttt
     1681 gacctcccag aaccccagcg ctattcaatt actcataggg attagttcgg tggttcctgc
     1741 tcttcctgat ctacccactg cttaatcacg gcaatcagtt cctcaagctc gg
//
LOCUS       DASQSL010000096         2084 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_124380, whole genome shotgun sequence.
ACCESSION   DASQSL010000096 DASQSL010000000
VERSION     DASQSL010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2084
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124380"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..809)
                     /gene="lgt"
                     /locus_tag="VE844_00985"
     CDS             complement(<1..809)
                     /gene="lgt"
                     /locus_tag="VE844_00985"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005958648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HZB99977.1"
                     /translation="MLTFPDIDPIAFRLGPVAIRWYGISYLVGIAIAWGLMSLRARKK
                     DSGWSAQEVSDLVFYTTLGLVLGGRIGYVLFYNFPTYMENPLAIFKIWEGGMSFHGGL
                     LGALFAAWLFGRRYGKPFFTVTDFLAPATPPALFSGRIGNFINGELWGRPTNLPWGMV
                     FPDPAAGGVPRHPSQLYEAFLEGIVLFVILWVFSSKPRPQKATSGFFLIGYGCLRFLV
                     EFVRMPDAHLGFVALNWMTMGQILSIPMIVIGIGLVLYAYRHERGSWRKAGS"
     gene            1057..1914
                     /locus_tag="VE844_00990"
     CDS             1057..1914
                     /locus_tag="VE844_00990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018949312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HZB99978.1"
                     /translation="MRLSIEQLRRWENKSITLLGMSGVGKTRLAHILRKHQWFHYSGD
                     YRIGTRYLDEAILDNIKQQTMPIPFLRDLLRSDSIYISNNITVDNLKPVSIFLGKLGD
                     PEHGGLALKEFKRRQALHRDAEIAAMKDVPEFIRKATEIYGYQHFVNDAGGSVCELDD
                     TEVLGILAEHSLILYIQATEEDEEALIQRAEADPKPLYYREAFLDEQLAIFMKERGLS
                     YIALIDPDEFVRWIFPRLFYSRVPRYQAIADEHGYTVTTTELATVKNEADFLNLLETV
                     IARQSSVSV"
     gene            1940..>2084
                     /locus_tag="VE844_00995"
     CDS             1940..>2084
                     /locus_tag="VE844_00995"
                     /EC_number="2.3.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-succinyltransferase"
                     /protein_id="HZB99979.1"
                     /translation="MPLVAYSELPAFDALKQEGGTVIAREIALHQDIRELHIGLLNMM
                     PDAA"
BASE COUNT          526 a          606 c          531 g          421 t
ORIGIN      
        1 gaaccggcct tgcgccagct cccccgctcg tgcctatagg cgtataacac taatcctatg
       61 ccgatcacga tcattggtat agagaggatc tgccccatcg tcatccaatt taaggcgaca
      121 aagcccaaat gggcatccgg catccgcacg aactcgacta aaaatcgaag acagccgtat
      181 cctattaaga aaaacccaga ggttgccttc tgtggacgtg gtttactgga gaaaacccag
      241 aggataacaa ataacacgat cccttccaga aatgcctcat acaactgtga aggatggcgc
      301 gggaccccac ctgccgccgg atcggggaag accatgcccc acggcagatt ggtcgggcgt
      361 ccccacaatt cgccgttgat aaaattgccg atgcgtcctg aaaacaatgc cggcggtgta
      421 gcgggcgcca agaaatcggt cactgtaaag aacggctttc catatcttcg cccaaagagc
      481 caagccgcaa acaacgcacc caagaggcca ccgtgaaacg acatgccgcc ttcccagatc
      541 ttgaagatcg caagcgggtt ttccatatag gtcgggaagt tataaaagag tacgtagccg
      601 atccgccccc ccaagaccaa gcccaaggtc gtataaaaca ccagatcgct gacctcttga
      661 gcagaccagc ccgagtcctt tttcctggct cttagactca taagccccca cgctatagcg
      721 atacctacga gataagagat cccgtaccag cgtatcgcca cgggccccaa ccggaaggcg
      781 atgggatcaa tgtctggaaa ggtgagcata gttgccggat catgccgtgg aaaccagggg
      841 gttttatact ctaatagaca ctgcagcgca acaacgtggc tcccagagcc cagctcgtgc
      901 tgcaggcaat gacctcgagt aaaaatcagc gttcgcgctg gttatccgga tcgcgtaaac
      961 tatcccagaa tcatcgggta tagccaaagt ggctcaggca cgggatgtcg ccctaagcgg
     1021 agatccccta tgccttcgag catagggagt gtctgcatga gactcagcat cgaacaactc
     1081 aggaggtggg agaataaaag catcacgctg cttggcatgt ccggcgtcgg caaaacccgg
     1141 ctggcccata tactgcgcaa acatcagtgg tttcattatt cgggcgatta ccgtatcggc
     1201 acccgctatc tcgacgaggc tatcctcgat aatatcaaac aacagaccat gccgatcccg
     1261 ttcttgcgcg atctgcttcg ctctgattct atctatatca gcaataacat caccgtggat
     1321 aacttgaagc ctgtgtctat ctttctcggc aagcttggcg atcccgagca cggtgggctc
     1381 gcactcaagg aattcaaacg ccgccaggcc ttgcaccggg acgccgagat cgccgccatg
     1441 aaagacgtgc cggaattcat ccgcaaggcc accgagatct atggctatca gcacttcgtc
     1501 aacgatgccg ggggcagcgt gtgcgaattg gatgacaccg aggtgctcgg tattcttgcc
     1561 gaacacagct tgatcctcta tattcaagcc accgaggagg acgaggaggc cctgatccag
     1621 cgcgccgagg ccgatcccaa gcccctctac tatcgcgaag cctttctgga cgaacaactg
     1681 gccatcttca tgaaagagcg gggcctctct tatatcgcgc tgatcgaccc cgacgagttc
     1741 gtgcgctgga tcttcccccg cctcttctat tcacgtgtac ctcgctatca ggcgattgca
     1801 gacgagcatg gatatacagt gaccaccacc gagcttgcca cagtcaagaa cgaggccgat
     1861 tttctgaatt tgctggaaac ggtgatcgcc agacagtctt cagtgtcggt ttaacccctt
     1921 aacggagaga acactggcca tgcctctggt tgcctactca gagctgcccg ccttcgatgc
     1981 cttaaaacag gaagggggga cggtgatcgc acgcgaaatc gcgttgcacc aggatattcg
     2041 ggaattacat atcggcctgc tgaacatgat gccggatgcg gcgt
//
LOCUS       DASQSL010000097         1106 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_14485, whole genome shotgun sequence.
ACCESSION   DASQSL010000097 DASQSL010000000
VERSION     DASQSL010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14485"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..548)
                     /locus_tag="VE844_01000"
     CDS             complement(<1..548)
                     /locus_tag="VE844_01000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013163401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle receptor subunit
                     alpha"
                     /protein_id="HZB99980.1"
                     /translation="MFTSLSSRLEDVFRRLRSRGKLTEANIREALREVRLALLEADVN
                     YGVVKDFIERVREKAVGTAVLQSLTPGQQVVKVVHQELISLMGGDSPGKLQMASVPPT
                     IIMLVGLQGSGKTTTAAKLAKRLQKEGRRPFLIPADVYRPAAITQLQILGQQIAIPVW
                     ETNPAAKPLDICREAVSALRSRG"
     gene            complement(818..>1106)
                     /locus_tag="VE844_01005"
     CDS             complement(818..>1106)
                     /locus_tag="VE844_01005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99981.1"
                     /translation="GGPVATGQGVEFVLAKRETTPSSSIGTFTLFQHRVPGGSGPRRV
                     QIVVVNADENRQVFDEMRQSGGDVRVLVRVKGETTARVYYDGVLVEEKRIE"
BASE COUNT          232 a          337 c          305 g          232 t
ORIGIN      
        1 ccacggctgc gcagggcgct cacggcctcg cggcagatgt cgaggggttt ggcggcgggg
       61 tttgtctccc atacagggat cgctatttgt tgccccaaga tctgcagctg tgtgatggcc
      121 gctggtcgat acacatcggc gggaatcagg aaaggacgcc gcccctcttt ctgaaggcgc
      181 ttggctaatt tggccgcggt tgtggttttg ccggagcctt gcaggccgac gagcataata
      241 atcgtcgggg gaactgaagc catctgcagt ttacctggcg aatccccccc cattaggctg
      301 atgagttcct gatgcacgac cttgacgacc tgctgacccg gtgtcaagct ttggagcacg
      361 gctgtaccga cagctttttc gcgcacgcgc tcaatgaaat ccttcaccac accatagtta
      421 acatcggcct ccagaagcgc caagcgcacc tcgcggaggg cctcgcgaat gttggcctct
      481 gtgagtttac cccggctgcg cagccggcga aagacatctt ccagccgtga cgaaagactt
      541 gtgaacacga cgatcccctc gcctgtatat tgtacctaat aatagcaacc gggccaccgc
      601 gaggaggcaa agcgcacccc atccggccaa aatgcggtaa ccagtgtatg aaatggaacg
      661 ggttctgtca agtctcaagg aaggatgcac tgggccgcca gcagggaagg aggacagctt
      721 ggcgacgttc gacaccacga agatctactt gggatgacat agggctgaga tgatcgggtc
      781 ctgaccgacg aacagcgtga tcctcactct cacctcgcta ttcgatccgt ttttcttcga
      841 caagcactcc atcataatag actctggctg tcgtctcgcc tttcacccgt acgagcacgc
      901 gcacgtcccc tcctgattga cgcatttcgt cgaacacttg gcgattctcg tctgcgttca
      961 ctacgacaat ctgtacacgt cgagggcccg atcctcccgg aacgcggtgt tggaacaagg
     1021 taaaggtccc aatactgctg gaaggcgtgg tttcccgctt cgccagcaca aactcgacac
     1081 cctggcccgt cgccaccggg cctccc
//
LOCUS       DASQSL010000098         1929 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_151842, whole genome shotgun sequence.
ACCESSION   DASQSL010000098 DASQSL010000000
VERSION     DASQSL010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1929)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1929)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1929
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151842"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(410..883)
                     /gene="ssb"
                     /locus_tag="VE844_01010"
     CDS             complement(410..883)
                     /gene="ssb"
                     /locus_tag="VE844_01010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004249162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HZB99982.1"
                     /translation="MAGRGINKVILIGHLGAEPEVRYMPSGQAVANLRLATSESWRDK
                     ETGESQERTEWHRVVLFGRTAEIAKEYLHKGSQVYIEGRIQTRKWQDKEGQERYTTEI
                     VGLDMQMMGSRSGGTASFDKEPAKEPAAPAPAARPQPAPAVDTAPPADFDDDIPF"
     gene            complement(918..>1929)
                     /locus_tag="VE844_01015"
     CDS             complement(918..>1929)
                     /locus_tag="VE844_01015"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZB99983.1"
                     /translation="MAFAADLIREDQRTKAMALIGIGIGVAFAGAFIVGPALDHWLGL
                     KGLFWLTAVLALSAIAILYLQVPHPARISFHRECEPEPTQIMGMIRNPELLRLDVGIL
                     FLHLILTASFVVLPVILRDQIGLASVHHWKVYLPVLVFSMLVILPFVRHADRLGRTKE
                     VFVSAVSLLFIAQVGLYFGHGVRGSFYVMLLLFFIAFNYLEANLPALVSRVAPAERKG
                     TALGVYSMAQFLGIFLGGALGGWLYGRFGAQSVFLLCSALAVVWLPLAWGMSKPHNLS
                     SQLLHVGQLSPAEAARLTIEFIGVPGVAEAVVSEDGIAYLKVNLDTLDQEALRKISPV
                     EG"
BASE COUNT          454 a          551 c          524 g          400 t
ORIGIN      
        1 ccgtttcctc cgctcaggca ggagaaaatc gtttaactcc tcgtaaaatc gaaattcggc
       61 gatagccatt ggtttggtta agctgttcac ggctgcatca ccggcgtgtt caatgcattg
      121 taaaggggtt taggctactc cgttgatgaa agcctttatc aggcacctca tgcctactaa
      181 agcgactgat agcccgctct cgaaaatatc gagattgctt agaggctttg ggagttccct
      241 cgcagcgaga ccctgtagga ggggcgttta caaggccagc ctggtggatt gcgagcgcta
      301 cgtgctcacc tggtatcgct atatcgaact caagccggtg cgtatcggga tggtctcgga
      361 cccggctgac taccgttggc cgagttatcg gcgaaacgct ggggaggcct caaaacggta
      421 tatcgtcgtc gaagtcagct ggaggcgctg tatcaaccgc cggagccggc tggggcctgg
      481 ccgcaggagc gggagcggca ggttccttgg caggctcctt gtcgaaactc gcggtaccac
      541 cgcttcggct gcccatcatt tgcatgtcaa gccccacgat ttcggtagta tagcgttcct
      601 gtccctcctt atcttgccac ttgcgggtct ggatccgccc ttcgatatac acctgagatc
      661 ccttatgcag atattccttg gcgatctcgg cggtacggcc aaacaatacc acccggtgcc
      721 attccgtgcg ttcttggctt tccccggttt ccttatctcg ccaggattca ctcgtggcca
      781 ggcgcaggtt ggctacggct tgcccgctcg gcatgtagcg aacctccggc tcggcgccga
      841 gatgaccgat taagatgact ttattgattc ctcttcctgc catgatcgtg ttctctcaat
      901 ttaaaaaaaa ccgatgatta cccctcgacg ggggaaattt tacgcaaggc ttcctgatcc
      961 aatgtgtcga gattgacctt aagatacgcg atcccgtctt cggagaccac cgcttccgcc
     1021 acgcccggga cgccaatgaa ttctatagtg aggcgggccg cctccgctgg gctaagctgg
     1081 cccacatgga gtagctggct actgagattg tggggcttcg acatccccca tgccaacggg
     1141 agccacacca ctgccagggc gctgcacaac agaaatacgc tttgggcccc aaacctgccg
     1201 tatagccatc cgccgagggc gcctcctaag aatataccca agaattgagc catagaataa
     1261 accccgagcg ctgtcccctt gcgctcagcg ggcgccactc gagagaccag ggccgggaga
     1321 ttggcctcaa gataattgaa ggcaataaaa aagagcaaca gcatcacata aaaggatccc
     1381 ctgaccccgt ggccgaagta cagcccgact tgggctataa acaacaggga tacggcgctt
     1441 acaaatactt ctttggtgcg ccctagccga tcggcgtgcc tcacgaaagg taggatcact
     1501 agcatagaga atactaaaac aggcagatac accttccagt gatgaacgct cgcaaggccg
     1561 atctgatcac gcaggatcac aggtaaaacc acgaagctcg ccgtgaggat cagatgcaga
     1621 aacaagatcc cgacatcgag acgaagtaac tcggggtttc tgatcatgcc catgatctga
     1681 gtaggctcgg gttcgcattc gcggtggaag gaaatgcgcg caggatgcgg cacctgcaga
     1741 taaaggatgg cgatggctga aagggcaagg acagccgtga gccagaacag ccctttaagg
     1801 ccgagccagt gatccagagc cggcccgaca ataaaagccc cagcaaaggc cacgccgatg
     1861 cctataccga tcaaggccat ggccttggta cgctggtcct cgcgaatcaa atcagcggca
     1921 aaggccatc
//
LOCUS       DASQSL010000099         6071 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_69472, whole genome shotgun sequence.
ACCESSION   DASQSL010000099 DASQSL010000000
VERSION     DASQSL010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 6071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6071
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69472"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..207)
                     /locus_tag="VE844_01020"
     CDS             complement(<1..207)
                     /locus_tag="VE844_01020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99984.1"
                     /translation="MQINEKIAQAVIDDRQLEIAPRLNLGYRKVLHLVLQQGVLSGGA
                     QASLEDNLLHSLYLLSYQDDKSFWL"
     gene            complement(380..1150)
                     /locus_tag="VE844_01025"
     CDS             complement(380..1150)
                     /locus_tag="VE844_01025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006892392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HZB99985.1"
                     /translation="MMDRHQLVVVIPAYNEAATLRAIAHAAFAEVPRVIVIDDGSTDG
                     TARAVAGLPVTLLRNPHNLGKAASLWRGIDTALAEGAQGIVTLDGDGQHEPRDLPRLI
                     DAFEAHRDALIVGSRLHAREHIPRNRYYANRFANFWISWAAGQAIEDTQCGYRIYPAK
                     VLLALRQRLASSRGFVFESEILIEAGRQGTSIMTVPVTAVYPQGRRSRFRPVTDIALI
                     VRMVAWKLASWGFYPPGLMRYWRQLASAREPRSSPRYP"
     gene            complement(1153..1872)
                     /gene="fabG"
                     /locus_tag="VE844_01030"
     CDS             complement(1153..1872)
                     /gene="fabG"
                     /locus_tag="VE844_01030"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011289908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HZB99986.1"
                     /translation="MRRALVTGGSGVIGAAICRQLAHDGLHVIIHAYSKPEVACALAH
                     EIQTAGGSAETTRFDIADPLQTQEALESLLKTGAIQVLVNNAGIYRDAPMAGMTYAHW
                     EQVIAVSLTGFFNVTRPLLLPMIGARWGRIVTISSISGILGNRGQVNYAAAKAGIHGA
                     TKSLALELASRGITVNAVAPGIIATEETTQAFTVEDIARLVPMKRAGRPEEVASLVGF
                     LVSDSAAYISGQIISVNGAMA"
     gene            complement(1913..2716)
                     /locus_tag="VE844_01035"
     CDS             complement(1913..2716)
                     /locus_tag="VE844_01035"
                     /inference="COORDINATES: protein motif:HMM:NF025100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase chain length factor"
                     /protein_id="HZB99987.1"
                     /translation="MIPVYIDGIGVLGPGLPGWMASRSILTGRELYALSPVPGLHAEL
                     LPVTERRRCPLSARWALTVAKEALASGGVAGDGVITVFTSSDGDGAILQAMLTALAAP
                     DPYLSPTTFHNSVHNTAAGYLGIATHSRQASTSLCAFDHSFAAGFMEAAASVQVDRYP
                     VLLVAYDLPLPYPLYPLRPYDHGFAVALLLMPERSARSLVRCRIGLCQERCPSPFPAF
                     VPDGLRANPAAHCLPLLAALAQGETCMVRLGYGYNDLQVECQPFVRSEE"
     gene            complement(2713..3894)
                     /locus_tag="VE844_01040"
     CDS             complement(2713..3894)
                     /locus_tag="VE844_01040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018507429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-[acyl-carrier-protein] synthase
                     family protein"
                     /protein_id="HZB99988.1"
                     /translation="MQPVFITAMTTTTALGRGLCATRLALETMRPGLSPNDFEDSALE
                     GYIGRVAGLEAEPVITSLAEFDCRNHRLAQLSLRQDNFEAAVARARARYGPSRIAVLM
                     GTTTAGMHSAEVAYRECKDPEGPLSSWFSYCHTQNLFSAADFVQQYLHLGGPAVAVST
                     ACSSSAKVFASACRYLYAGFCDAAVVGGVDSLCFTTLYGFAALELLSRQPCRPCDVTR
                     DGISIGEGAGFALLEREGHSDIALLGYGESSDGYHMSSPHPEGVGAWLALQQALDRAH
                     LAPADIDYINLHGTGSPLNDKAEDQAIFRLFGNQAPVSSTKGWTGHTLGAAGVIEAIL
                     CGLCLQHGFLPGTLNTTVVDPALRCQILLRSEPRAIRYVISNAFGFGGANCSLVLGKA
                     A"
     gene            4049..5050
                     /gene="lpxK"
                     /locus_tag="VE844_01045"
     CDS             4049..5050
                     /gene="lpxK"
                     /locus_tag="VE844_01045"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020161077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HZB99989.1"
                     /translation="MDVSKQLEKLWYGSHPLGLLLAPLSALYNGLVGLRQGAYAKGWL
                     LVRRLPVPVIVIGNLSVGGTGKTPLVIAVAALLKAHSYQPGIVARGYGGKAKQWPQPV
                     QPGSDPREVGDEAILLARRSQCPVVVGPNRWAAAQALCHYYPCDIIVSDDGLQHLELG
                     REIEIAVIDGVRRHGNGRCLPAGPLREPVSRLRQVDLIVTNGSARLGEMAMHCFLELP
                     RSLLDPERTQPLADLCKTKAHAIAGIGHPERFFAALEDHGVCGVIRHPFPDHHRFCAR
                     DIHFGDGLPVLMTEKDAVKCRGFAGPEHWYVPVEARLPAVFEQRLLALIERRTKTNG"
     gene            5043..5222
                     /locus_tag="VE844_01050"
     CDS             5043..5222
                     /locus_tag="VE844_01050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HZB99990.1"
                     /translation="MDKRLLEILACPVCKAKLIYQKQAAELICKPCRLAYPIRDDIPV
                     MLEDKARPIPVDQEL"
     gene            5223..5993
                     /gene="kdsB"
                     /locus_tag="VE844_01055"
     CDS             5223..5993
                     /gene="kdsB"
                     /locus_tag="VE844_01055"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008291363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008690 - 3-deoxy-manno-octulosonate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HZB99991.1"
                     /translation="MSFSVYIPARYGSTRLPGKPLRDLAGKPLIRHVFERAVESGAGT
                     IIIATDDERIRACGEGFGAKVCMTSADHTSGTDRIAEAAALLGEEEETVIVNLQGDEP
                     CMPAQAIRQVAGLMGEPGDAEMATLCVPLLDPKELFDPHVAKVVLNQQGHALYFSRAP
                     IPWHRDGFTETRAVERLPAHAGYYRHIGLYAYRAGFLQHFSRSPICPLEQIEHLEQLR
                     ALYYGFQIRIAVAEVPVEMGIDTPYDLERIRQLFVDGG"
BASE COUNT         1263 a         1741 c         1863 g         1204 t
ORIGIN      
        1 taaccagaag ctcttgtcgt cctgatacga caacaggtac aagctgtgca gcagattatc
       61 ctctaaactt gcctgcgcgc caccgctcag cactccttgc tggagcacaa ggtggagcac
      121 tttgcgatag ccaaggttga ggcgaggcgc gatctccagt tgtcggtcat cgatgacagc
      181 ttgtgcgatc ttttcattga tctgcatttg cccaaacaat tgtgcgctgg tggtggatcc
      241 ttctcgttgc gatctacaaa gaaacgctcg acctcttccg gccgcacttg tcccaccgga
      301 ttgaagtcgc tgatgatcgg aagccaaaat tcttgtggag taaccatcac tttcttcctc
      361 cttcgagact ataccttgtt caagggtacc ttggcgatga tcttggctcg cgcgccgacg
      421 ctagttgccg ccaatagcgc atcagcccgg ggggataaaa cccccatgag gcaagcttcc
      481 aagcgaccat gcgcacaatc aaggcgatat cggtcacggg ccgaaagcgg ctgcgacgtc
      541 cttgcggata gaccgcagtg acgggcacag tcatgatcga ggtgccctgc cttccggctt
      601 ctatcaagat ctcgctctcg aacacgaatc ctctggagga agcgagcctt tggcgcaggg
      661 ctagcaggac cttggccgga tagatcctgt aaccgcactg ggtatcttca atggcttggc
      721 cggccgccca ggagatccag aaattggcaa agcggttggc gtaatagcgg ttgcgtggaa
      781 tgtgctcccg cgcatgcaag cgtgagccga cgataagggc atcgcggtga gcctcaaagg
      841 catcgatgag ccggggcaga tcccgaggct catgttggcc atcaccatcc agggtgacga
      901 tgccttgcgc gccctctgcg agcgccgtgt cgatcccccg ccagagactt gctgccttgc
      961 cgaggttatg cggattgcgt aacaaggtca ccggcaggcc ggccaccgca cgtgccgtcc
     1021 cgtctgtcga gccatcgtcg atgacaataa cgcgcggcac ctctgcgaac gcggcatggg
     1081 cgatggcgcg tagggtcgca gcctcattgt aggcaggtat caccacaacc aactgatggc
     1141 gatccatcat agtcaggcca tcgctccatt caccgagatg atctgaccgg agatataggc
     1201 cgcactgtcc gacaccaaaa agcccacgag acttgcgacc tcctcgggcc ggccggcgcg
     1261 cttcataggc actaaccggg caatatcctc aaccgtgaac gcttgggtag tctcctcggt
     1321 cgcaataata cctggagcaa ccgcgtttac ggtgataccc cgcgaggcga gctccaatgc
     1381 cagtgacttg gtagctccat ggatcccggc tttagcggcg gcgtagttga cttgaccacg
     1441 gttgcccagg atccccgaga tcgacgagat ggtgacgatg cgtccccagc gggcgccgat
     1501 catgggcagc aatagaggcc tggtgacgtt gaagaatccg gtgagcgaca ccgcgatgac
     1561 ctgctcccaa tgagcatagg tcatgccggc catcggcgca tcccgataga tcccggcgtt
     1621 attgaccagc acctggatcg cgccggtttt gaggagtgat tccagggctt cctgagtttg
     1681 gaggggatcg gcgatatcga agcgggtggt ttcagcgcta ccgcccgccg tctggatctc
     1741 gtgtgccagc gcgcacgcaa cctcgggctt gctataggca tggataatga catgcaggcc
     1801 atcgtgcgcg agctggcggc agatggcggc accaattaca ccactcccac ccgtcaccaa
     1861 cgcgcgtctc atctcaactc ccaaagctga cacacccctc actcctcact cctcactcct
     1921 cactcctcac gaaaggctga cactccacct ggaggtcgtt gtatccatac ccaagccgca
     1981 ccatgcacgt ctccccttgc gccagagcgg cgagcagggg aaggcagtgc gccgccggat
     2041 tggcccgcag gccatcgggt acaaacgctg gaaacggact gggacaccgc tcttgacaga
     2101 gaccaatacg gcagcgcacc aagctacggg cggaacgctc gggcatgagc agcagtgcta
     2161 ccgcaaagcc gtgatcgtag ggacggaggg gatagagtgg gtatggcagg ggcagatcgt
     2221 aggccacgag cagtaccgga taacggtcca cctggacaga ggccgccgct tccatgaatc
     2281 ctgcggcgaa cgagtgatcg aaggcgcaga gactcgttga ggcctgccgc gagtgcgtcg
     2341 cgatcccgag ataaccggca gccgtgttgt ggaccgagtt gtgaaaagtg gtcggtgata
     2401 ggtaaggatc aggtgcggcg agggccgtaa gcatcgcctg gaggatcgcg ccatccccgt
     2461 cactgctggt aaagactgtg ataacgccat cgcccgctac tccaccgcta gccagcgctt
     2521 ccttggccac ggtcaaggcc cagcgcgcgc ttagaggaca gcggcgccgc tcggtcacgg
     2581 gcaataactc cgcgtgtaat ccgggcacag ggcttaaagc atagagttcg cgcccggtga
     2641 gaatggaccg cgacgccatc caccctggca ggcccggtcc cagcaccccg atcccgtcta
     2701 tgtataccgg tatcatgccg cttttccgag taccagggag caattggcgc ctccaaaacc
     2761 gaaggcattg gagatcacgt atcggatcgc tctcggttcg ctgcggagca ggatctgaca
     2821 gcgtagcgct ggatcgacga ccgtggtatt gagggtcccg ggcaaaaagc cgtgctgcag
     2881 gcagaggccg cagaggatcg cttcgatcac gccggccgcc cctaaagtat gcccggtcca
     2941 tcctttggtc gagctgaccg gggcctggtt cccgaacagg cggaagatgg cttgatcttc
     3001 ggccttatca ttgagcggac tgccggtacc atgcagattg atataatcga tgtctgcggg
     3061 ggcgagatgg gcgcggtcga gagcctgctg taacgcaagc catgccccca cgccttccgg
     3121 gtgcggactg gacatgtgat agccgtcgct gctttcgcca tagcccaaga gcgcgatatc
     3181 gctgtgcccc tcgcgttcga ggagagcaaa ccctgcgcct tcgccgatgg agatcccatc
     3241 gcgggttaca tcgcacggcc ggcatggctg gcgtgataac aactccagcg cggcaaaacc
     3301 atagagggtg gtgaagcaca ggctatcgac tccgccgacg accgccgcgt cacaaaagcc
     3361 cgcgtagaga taccggcaag cgctggcaaa gaccttggcg ctcgatgagc aggcggtgga
     3421 tacggccacc gccgggccgc ccaagtgtag gtattgttga acaaaatccg cggccgagaa
     3481 cagattctgc gtatggcaat agctaaacca ggaggagaga ggaccttcag ggtctttgca
     3541 ttcacggtag gcgacttcgg cagagtgcat accggcggtc gtcgtaccca taagcacggc
     3601 gatgcgggaa ggaccatagc gggcgcgcgc ccgggcaacc gccgcctcaa agttgtcctg
     3661 ccgtaggctg agctgagcca ggcggtgatt gcggcaatcg aactcggcaa gcgatgtgat
     3721 cacgggctca gcctcaagac ccgcaacccg accgatatag ccctcgagag cgctatcctc
     3781 gaagtcgttg ggagaaagcc ccggccgcat cgtttctaga gcaagccggg tagcgcagag
     3841 tcctcggccc aacgcagtgg tggtagtcat ggcggtgatg aaaacaggct gcatcgaata
     3901 ctatgaaaaa tagagcggcg ctatcacatc ttttccttct accggagcac ccaggtattc
     3961 gggcaggcgg tcagaggcca ttggggcatt gagaatcgcc tgttattata ataaattttg
     4021 ccctacttaa tacccgatat taactctcat ggatgtttca aagcagcttg aaaagctttg
     4081 gtatggcagc catcccttgg gcctgttgct tgcgccgttg agtgcgctct ataacggttt
     4141 ggtcggtctc cggcaggggg cgtatgcaaa aggatggctg cttgtccgtc ggttacctgt
     4201 accggtgatc gtcatcggca atctgagtgt gggcgggacg gggaagaccc cgttggtcat
     4261 agcggtagcc gcgttgctca aggcccatag ttaccagcct gggatcgttg cgcggggcta
     4321 tggtggtaag gccaagcaat ggccgcagcc ggtacagccg gggagtgatc ccagggaggt
     4381 gggtgatgaa gccatactgc ttgcgcgccg aagccagtgt ccggtggtcg ttgggccaaa
     4441 tcgctgggca gcggcccagg cactgtgcca ctattatccc tgcgatatca tcgtcagcga
     4501 tgatgggctg cagcatctgg aacttgggcg cgagatagag atcgcggtga tcgatggtgt
     4561 gcggcggcat ggaaacgggc gttgcttgcc cgcaggtccg ttgcgcgaac cggtgagccg
     4621 gctcagacag gtcgacctca tcgtcactaa cgggagcgca aggctaggag agatggcgat
     4681 gcactgtttc cttgagctac cccgatcgct cctggatccc gagcgtaccc agcctttagc
     4741 agatctttgt aagacgaagg cgcatgccat tgccgggatc ggccatccag aacggttctt
     4801 cgccgcgctc gaggatcacg gggtttgcgg cgtgatccgg catccctttc ctgatcacca
     4861 tcggttctgc gcgcgggata tccattttgg cgatgggctg ccggtgctga tgacggaaaa
     4921 ggatgcggta aaatgccggg ggttcgcagg cccggagcat tggtatgtgc cggtagaggc
     4981 ccgactgcct gcggtgtttg agcagcgtct gctcgcctta atcgaaagga ggacaaaaac
     5041 caatggataa gagattgctc gagatcctgg cctgccccgt ttgcaaggcc aagctgatct
     5101 accaaaaaca agccgccgag cttatctgta agccctgtcg cctggcttat ccgatccggg
     5161 acgatatccc cgtcatgctc gaggataaag cccgcccgat ccctgtcgat caggagctat
     5221 gattgagctt tagcgtctac ataccggcac gctatggatc gacccgcttg cccggcaagc
     5281 cactgcgcga tcttgccggt aagcctctga tccggcatgt attcgaacgc gccgtcgaaa
     5341 gtggcgccgg cactattatt atcgccaccg acgacgagcg gatccgtgcc tgtggtgagg
     5401 gcttcggggc taaggtatgc atgacctcgg cagatcacac ctcaggcacc gatcggatcg
     5461 ccgaggcggc ggcgctttta ggggaagagg aggaaaccgt catcgtcaat ctgcagggcg
     5521 atgaaccgtg catgccggct caagctatca gacaggtggc cggtttgatg ggagaaccgg
     5581 gcgatgcgga gatggcgacc ctgtgtgtgc ccctccttga ccctaaggaa ttattcgatc
     5641 cgcatgtggc taaggtggta ttgaatcagc agggtcatgc gctttatttc agccgggcac
     5701 ccatcccctg gcaccgtgat ggatttaccg agacccgtgc tgtggagcgc ctgccggccc
     5761 atgccggcta ttatcgtcat atcgggcttt atgcctaccg ggcggggttt ctacagcact
     5821 tttcccgatc gcccatctgc ccgctggagc agattgaaca cttagagcaa ttgcgggcct
     5881 tgtattatgg ttttcagatc cggatcgctg ttgccgaggt gccggtagag atggggattg
     5941 atacgccgta tgatctggag cggatacggc agttgtttgt cgacggaggg tagcttatga
     6001 gtagcaaaat ggctttattg gatatcgaga acgattgggg agcgcgggga tatagctgtg
     6061 cgatctggac c
//
LOCUS       DASQSL010000100         1708 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_124476, whole genome shotgun sequence.
ACCESSION   DASQSL010000100 DASQSL010000000
VERSION     DASQSL010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1708
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124476"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1342)
                     /locus_tag="VE844_01060"
     rRNA            complement(<1..1342)
                     /locus_tag="VE844_01060"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          297 a          564 c          447 g          400 t
ORIGIN      
        1 agccgtcctc acggtcgacc ttctctgctg acggaacgct cccctaccac cgctccacgc
       61 ccgaaggcgg gaacgatccg aagcttcggt accaggcttg agccccgttg gatcttcggc
      121 gcggaatcac ttgaccagtg agctattacg cactctttaa atggtggctg cttctaagcc
      181 aacatcctgg ttgtctaagc aactccacat ccttccccac ttagtctgaa ttttgggacc
      241 ttagctgtcg gtctggactg ttttcctttt gaccacgaag cttagccctc gcagtctgac
      301 tcccggggta tggaatcgtg ggattcggag tttgattggg tttggtaagc gggaagcccc
      361 ctagcccatt cagtgctcta cccccacgac tgaacccccg aggctagccc taaagctatt
      421 tcggggagaa ccagctatct ccgagttcga ttggcatttc acctctaccc acaggtcatc
      481 ccctagcttt tcaacgctag tgagttcggt cctccacggg acattactcc cgcttcaacc
      541 tgcccatggg tagctcactc ggtttcgggt ctacccgctg cgactgtgac gccctgttca
      601 gactcgcttt cgctacggct gcgtccttca cggacttaac cttgccacag accgggtaac
      661 tcgccggctc attcttcaaa aggcacgcca tcaggctacc cgccggccga agcctgcggg
      721 caacaccctt tgactgcttg taagcacgcg gtttcaggta ctatttcact cccctcccgg
      781 ggtgcttttc acctttccct cacggtactg gttcactatc ggtcgccaag agtatttagc
      841 cttggacggt ggtccgcccg ggttcccaca tgaagagacc ttccacgtgg tactcaggga
      901 cacgtccggg agtcggatcg ctttcgctta cggggctatc accctctgtg gcgggccttt
      961 ccaggccgct tctgctaacg aaccgatttg taactccctg caggaatcgc agctcccgcc
     1021 ggtcggccct acaacaccgc gactgcaacg gctgcgacct atcacgcagc cacggtttgg
     1081 gcttctccgc tttcgctcgc cactactaac ggaatgttct ctgctcctcg aggtacttag
     1141 atgtttcagt tccctcggtg tcctcgtcac ggtctatgta ttcaaccgtg cgtcccggga
     1201 cattactccc ggggggtttc cccattcgga tatctccgga tcaacgcttg ctcgcaactc
     1261 cccgaagcat ttcgctgcct gccacgtcct tcgtcggctc ttggcgccaa ggcatccacc
     1321 gcgtgctctt agtagcttga cctaacacgt tcacgcggct agcacggtgc tggcctgcgc
     1381 atcacgatgc ggtcgcgtcg gaatctcctc gacgaaatcg atgcttccac tcttcgattg
     1441 gtaaggcccg cgcctcgtgg cgcgtgctca ccgtctccgt cacttgcgac gtcacggcgt
     1501 cagcgtggtc cgctgaccga tgggcacgac gacggtcgca cgcagcggtc agaagaccga
     1561 ttccgatgtg gggctgtcac aacattcgcg aggagatggc ggtctcctcg cgagaggagg
     1621 gcaactgtat cacccgccgt tcgggtggtc aaccgagcgg gccggccgga gcccatcggt
     1681 cccgggagct cgcctggacg cacagaat
//
LOCUS       DASQSL010000101         1068 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_938, whole genome shotgun sequence.
ACCESSION   DASQSL010000101 DASQSL010000000
VERSION     DASQSL010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_938"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1010
                     /locus_tag="VE844_01065"
     CDS             <1..1010
                     /locus_tag="VE844_01065"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HZB99992.1"
                     /translation="FARWGYGDPADMDLDAVREILGQEAHDDIAELQRMRQMLEEAGL
                     LRNTGNGMQLTPAGQRKIGAKALRDIFKEMKKSLFGNHHAIVRGASGDRMDETKTYEF
                     GDPFYLDIGQTLKNAVIRQHKGVPVEVDPVDFEVYRTELLTRSSTVIMVDMSHSMELY
                     DYNRFTAAKKVALALESLIRTQFPRDKLYIVGFGDYAREVKLGDLPYLNVGPEHTNTQ
                     EGLELSRKLLSRDSGTNKQIIMITDGRPTAARINGRLFIHTWGLHPAILEETYLAAER
                     CRRSQITINTFMLADDYYLIHFVKELTRICRGRAFYTTPTRLGEYILVDYINRKRKRI
                     A"
BASE COUNT          240 a          333 c          297 g          198 t
ORIGIN      
        1 aattcgcgcg ctggggctat ggagaccccg ccgacatgga cctggatgcc gtccgtgaga
       61 tcctcgggca ggaagcccat gacgacatcg ccgagttaca gcgcatgcgc cagatgctgg
      121 aggaggcggg attgttgcgc aataccggca acggcatgca gctcaccccc gccggccagc
      181 ggaaaatcgg cgcgaaagcg ctacgggaca tcttcaagga gatgaagaag agcctattcg
      241 gcaaccacca cgccatcgtg cgcggggcct ccggcgatcg catggatgag acgaagacct
      301 atgagttcgg cgaccccttc tatttggaca tcgggcagac gctgaaaaac gccgtcatcc
      361 gccaacacaa aggggtaccg gtcgaagtcg acccggtcga tttcgaagtg taccgcacgg
      421 agttactcac ccgcagctcc accgtcatca tggtcgacat gtcacatagc atggagctct
      481 acgactacaa ccgcttcacc gccgccaaaa aagtggcgct ggcgctggaa agcttgatcc
      541 gcacccagtt tccacgggac aaactgtaca tcgtggggtt cggagattat gcccgtgagg
      601 tgaagctcgg cgatttaccc tatctcaacg tcggtcccga gcacaccaac actcaggagg
      661 ggcttgagct ctcacgcaaa ctgttatcgc gggatagcgg taccaacaag cagatcatca
      721 tgatcaccga cggccgtccc acggccgccc gcattaacgg tcggctattc attcatacct
      781 ggggtttgca tcccgccatc ctggaagaga cctatctcgc ggccgagcgc tgccgacgca
      841 gccagatcac cattaacacc ttcatgctgg ccgatgatta ctacctgatc cacttcgtca
      901 aggagctgac acgcatctgt cgggggcggg ccttttacac gactccgact cggctgggcg
      961 aatacatcct ggtggattac atcaaccgca agcgcaagcg cattgcgtag ctagctgtca
     1021 tgcgcctctt tgcccctctc ctaccggggg ctttgcccaa gaagtcgg
//
LOCUS       DASQSL010000102         2698 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_69484, whole genome shotgun sequence.
ACCESSION   DASQSL010000102 DASQSL010000000
VERSION     DASQSL010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2698
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69484"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1086..2363
                     /gene="ltrA"
                     /locus_tag="VE844_01070"
     CDS             1086..2363
                     /gene="ltrA"
                     /locus_tag="VE844_01070"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011713626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZB99993.1"
                     /translation="MIKTSISLQDLRRRIYTQAKAEKSGRFWGLYVHVCKLETLQAAY
                     EMAKGNDGAPGIDGVTFAAIEAAGVEEFLQELRDELISEAYRPIRNRRKEIPKGGGKV
                     RILGIPSIRDRVVQGALKLILEPIFEADFQAGSYGYRPKRTAHQAVQRVAEAIVHNKT
                     TVIDVDLKSYFDTVRHDLLLRKVAQRVNDDQVMRLLKLILKTSGKRGVPQGGVISPLL
                     SNLYLNEIDKMLERAKETTRCGRYTYIEYARFADDLVILIDGYRQWEWLAKAAYHRLL
                     EELAKLDVQLNHDKTRWVDLAKGESFSFLGFDFRRVKTRRGVWGVRYAPTIKARTELL
                     RKLKEVFRRFRSQPVDRVVDLINPILRGWVNYFRVGQASRCFGYVKDWVEKKIRRHMM
                     RARKYRGFGWKRWSRAWIYEQLRLFSNYRVVRL"
     gene            complement(2326..>2698)
                     /locus_tag="VE844_01075"
     CDS             complement(2326..>2698)
                     /locus_tag="VE844_01075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZB99994.1"
                     /translation="AGSEARTLSAYLAVELGAASLTCRVKDWRGTELKAQPVSSPSPS
                     GRVEDWRADGRVRWHNSIPFSMGLSPAPVITFPAPATSNPACRFPALGFPADFTPRVM
                     GPIGWERFRVTDERLDSWKTT"
BASE COUNT          666 a          655 c          857 g          520 t
ORIGIN      
        1 cttggttgaa ataccaagac cgcccaatca gaggaccggt tgcgaagttg atccacactg
       61 gggcgaggcg agttgatatg gataacagta gcgaatcacc tgaaaaagca tccaattaac
      121 gccacaacag caatctggtt gtgtgaggac cgagaatatc tcgcagcaaa ttacagtagt
      181 tagctgcaaa ccctgagacc tcggtgggtg aaatggtggg tcctaagtca acattaaaac
      241 acttgtttgg gacagataaa gacagtcaag tctctctgag aggagaggta ctgttcaagt
      301 atatcgactt gactggagta ggatgcagaa ggaattacat ggatgtaaga atttctgcgg
      361 ttgatatgtt tgtaaactcg acgttgcgct acggcaacga ggtacaaatg acggtgacag
      421 aggatcgaaa gatctgaatg gatgtcggag tacctcacac ttggaagagt gacatgctga
      481 caatacagag agcctacagt aaaaagtcaa atctgaaaag gacatgcgta tcagctagga
      541 gccggatgag ttggaaactc tcacgtccgg ttgtgtgtcc agcgaaggct ggcatgttca
      601 gcaggagaca gtcctgccgg ggtaaaagtc agcagccccg tagcttggat agcagggtgg
      661 cgggaaacca agaccttgga gcctatcgac ccggactccc ttggggaggc gcgagtcacc
      721 aggccgtaac gaaagtgaac gcagaggtgg ccccgaaagt gagaagcctc gaaggccgag
      781 cccccaaccg tagggcgaag gcagtatggg ctagccgaac gctgactgag acggctagac
      841 cactttgacg gggtggaagc gacggcatgg tggcaagggc atgctaagca actggagaaa
      901 ccctcctcgc ccccggcaga aatggctgga gcaaggtaag tcctataacc ggaagccccg
      961 ggaagtggac cgaaggcgag agggtggcgg aggggcgtgg agtagcggtg aggcggggta
     1021 atgcccgcag agcgaaggcg ccctactgtt gatattcttc taacaacatg ggaggcaagg
     1081 gcggaatgat aaagacgtcc atcagtttgc aagacctgcg gaggaggatt tacacccagg
     1141 cgaaggctga gaagtccggg cgcttttggg ggttgtatgt tcatgtctgt aagcttgaaa
     1201 ccctccaggc agcctacgag atggccaagg gcaacgacgg cgctccgggt atcgatgggg
     1261 tgacctttgc ggccattgag gcggcgggcg tggaggaatt tctgcaagag ctacgggatg
     1321 agctcatctc agaagcgtat cgacccatcc ggaaccggcg caaggagata cccaagggag
     1381 gcggaaaggt ccgaatcctc ggtattcctt cgatacggga tcgggtggtt cagggcgcgc
     1441 tcaagcttat cttggagcct atctttgagg ccgactttca agcggggtcg tacggatacc
     1501 gaccgaagcg aacggcccac caagcggtac agagggtggc tgaggccatc gtccacaaca
     1561 agactacggt gatcgatgtg gatctgaagt cgtattttga cacggttcga cacgatctgc
     1621 tgttaaggaa agtggcacaa cgggtcaatg acgaccaagt gatgcgcctg ctcaagctca
     1681 ttctcaagac cagtggcaaa cggggtgttc cccaaggcgg ggtaatctcg ccgctgctca
     1741 gcaatcttta tctcaacgag atagacaaga tgctggagcg ggccaaagag accacgcgct
     1801 gtgggcggta tacctatatc gaatatgccc ggtttgctga tgatctggtg atcctgatcg
     1861 atggctaccg ccagtgggaa tggctcgcca aggcggccta ccaccgtctc ctggaagaac
     1921 tggccaagct tgatgtacag ctcaatcacg acaagacgcg atgggttgac ctcgcgaagg
     1981 gagaaagctt cagtttcctc gggttcgact ttcggcgtgt gaagacacga cggggtgtct
     2041 ggggggtccg gtacgcaccg acgataaagg cgcggaccga gttactccga aaactcaagg
     2101 aggtctttcg gcgctttcga tcccaaccgg tagatcgggt cgtagacctg attaacccga
     2161 tcctgcgggg gtgggttaac tacttccgtg tgggtcaggc gagccggtgt tttggctacg
     2221 tgaaggactg ggtcgagaag aagatcaggc gccatatgat gcgcgcacgc aaataccggg
     2281 gctttggctg gaagaggtgg agtagggcct ggatttatga acaactcagg ttgttttcca
     2341 actatcgagt cgttcgtctg tgacccgaaa gcgctcccaa ccaataggtc ccataaccct
     2401 gggcgtgaag tcagcaggaa agcccagtgc cggaaatcgg cacgctgggt ttgacgtggc
     2461 gggggctgga aacgtgatca cgggagccgg actgaggccc atgctgaaag gtatggaatt
     2521 atgccaccgg accctaccgt cggcgcgcca gtcctcgacc ctaccggatg gggaggggct
     2581 ggagacgggc tgcgccttga gctcggtacc gcgccagtcc tttacccggc aggtcaagct
     2641 tgccgcaccc aactccaccg cgagataggc actcagggtc cgtgcttcgc ttccggca
//
LOCUS       DASQSL010000103         1302 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_124503, whole genome shotgun sequence.
ACCESSION   DASQSL010000103 DASQSL010000000
VERSION     DASQSL010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1302
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124503"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(133..870)
                     /locus_tag="VE844_01080"
     CDS             complement(133..870)
                     /locus_tag="VE844_01080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005876396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HZB99995.1"
                     /translation="MEKKHIALLAVLYGFMLNVAAIAEAQKMDAQQALSAKQHSIIPI
                     AAFTATGDLEKLRTALHAGLDAGLTVNEIKEILVQMYAYAGFPRSLNGINTFMAVMDE
                     RQAKGIKDEMGKDASPVPADMNKDAYGARVRARLAGQDVIPPPSRYQLFAPVIDTFLK
                     EHLFADIFARDNLDYQSRELATIAALASMTGTAGQLQFHLGAAMNTGLTEAQMKEFIA
                     VLKSKVGTQEAESASAILAEVLSNRAK"
     gene            complement(881..>1302)
                     /locus_tag="VE844_01085"
     CDS             complement(881..>1302)
                     /locus_tag="VE844_01085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014821596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HZB99996.1"
                     /translation="AAAHTTSQTISRAGSQASITGPAAFFTGHVRIDPLFPATEAAPF
                     SGASVTFEPGARSAWHIHPTGQHLIVTAGVGRTQAWGGPIEEIKAGDVIWCPPQVKHW
                     HGASPTTAMTHIAITGTHNGKNVEWMEQVTDEQYHGK"
BASE COUNT          234 a          353 c          382 g          333 t
ORIGIN      
        1 tgaaatgcga cattgactgc cagttctagt gttggattta cagttttacc gagtttgggg
       61 caaagtcggt aaaagcgtat ttttcagagc ggtttcgcca cacgttcatg attgctcttg
      121 cggtctggcg tcttattttg ctctgttgct taacacctca gctaatattg ccgacgcact
      181 ctcagcttcc tgtgtaccga ccttggattt gagtacggca atgaactcct tcatctgagc
      241 ttcggtcagt cccgtattca tcgcggcacc aagatggaac tggagctggc cggctgtgcc
      301 tgtcatgctg gcaagggccg caatggtcgc cagttccctg ctttggtaat cgaggttgtc
      361 acgggcgaag atgtccgcaa aaaggtgctc tttcaggaac gtgtcaatga cgggtgcgaa
      421 cagttgatac ctgctgggcg gcggtatcac gtcctgcccg gcgagccgtg cccggaccct
      481 tgcgccgtat gcatccttgt tcatgtcggc aggcacggga ctggcgtctt tgcccatctc
      541 atccttgatc cctttggctt gccgctcgtc cataacggcc ataaaggtgt tgatgccgtt
      601 gagactgcgg gggaatcccg catacgcata catttgcacc aggatttcct tgatttcgtt
      661 cacggtcaaa cccgcatcca gccctgcatg caaagcggtt ctcagctttt ccagatcgcc
      721 ggtggcggta aaggccgcga tggggatgat actgtgctgt tttgcgctca gcgcctgctg
      781 tgcgtccatc ttttgtgcct ctgcaatggc tgcaacgttc aacataaagc catagagaac
      841 tgccagcaac gcgatgtgtt ttttctccat gatgcacgcc ttatttgccg tggtattgct
      901 cgtcggtgac ctgttccatc cattcaacgt tttttccgtt gtgtgttccc gtaatggcga
      961 tatgcgtcat ggcggtggtg ggggaggcgc cgtgccaatg tttgacctgt ggcgggcacc
     1021 agatcacgtc gcccgctttg atctcctcga tcgggcctcc ccaggcctgg gtccggccaa
     1081 cgccagcggt cacgatcagg tgctgccctg tcgggtgaat gtgccaggcg gatctggccc
     1141 ctggctcgaa ggtgacagac gccccggaaa agggcgccgc ctcagtggca ggaaacagtg
     1201 ggtcgatacg gacatggccg gtaaaaaatg cggcaggtcc tgtgatggac gcctgagaac
     1261 cggctcgaga gatcgtttgc gacgttgtgt gggctgcggc gg
//
LOCUS       DASQSL010000104         2305 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_151897, whole genome shotgun sequence.
ACCESSION   DASQSL010000104 DASQSL010000000
VERSION     DASQSL010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2305
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151897"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(108..1304)
                     /locus_tag="VE844_01090"
     CDS             complement(108..1304)
                     /locus_tag="VE844_01090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008483964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZB99997.1"
                     /translation="MDWETLYCPNRSCRFYGVPFRQSRLVKNGSSHGQKQALCRACGQ
                     SVAVRYGTAYWDLNAEAVIFEMAIRALAEGNSLRSTARIVQVDKDTACDWLDRAAQHC
                     RQVLLYLWRDLPVAECQLDELWSFVHTKEAHLVMAKRVCESYGDAWIWMAFAPGWRMV
                     LAFVVGKRIQANANLLLQRVAHVTDQGIPFFTSDQLPEYRTALLQVYGQWVQPARNGH
                     RGRFPQPRRLPLPDLLYAQVVKHRRRGHVVAVTTKVIFGEPDAIAARLASLPTSTIVN
                     TSYVERENLTLRQRNRRLTRKTNGFSKELTWLEKQLWLSLAYYHLVLPHESLRQPLSI
                     PEPTRGQGSKRRWTPVTPAMAARITDHVWTTQELLSYRVPASFLDRLHEFNHLFQPIE
                     DSRQGS"
     gene            1468..2301
                     /locus_tag="VE844_01095"
     CDS             1468..2301
                     /locus_tag="VE844_01095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZB99998.1"
                     /translation="MKYIKTLFIVFIVWLFLGIILFVFHSHFVYFPFRRLAASPDQIG
                     LSYETVYFTTEDGLKLHGWYVPAAHPRATLLVFHGNGGNISHRLELLAIFNRLAVDSF
                     IIDYRGYGLSEGKPTEAGTYRDALAAWHYLTVEREIPATRILVFGESLGGAIGSWLAT
                     QIRPAGLILQSPFTSIRDMARKHYPFWPVSLLLRIHYPTLDRIRAINCPILIAHSRTD
                     EIVPFIQGERLFKAAREPKRFLELSGGHNDGVLATGKPYIAGLDGFFSEVLQDDPVLS
                     P"
BASE COUNT          481 a          686 c          621 g          517 t
ORIGIN      
        1 cggacggacg tacaagcgtg cctcgcatac gcacaggcgc ttgttaccgg cgaggaggct
       61 ctccaaagcc accaaaggga gggcgtgccg atgcagggta gtgtccctca actgccttga
      121 cggctatcct cgattggttg aaacaagtgg ttgaattcat gcagtctgtc cagaaaggaa
      181 gccggaaccc gatacgacaa cagttcctga gtcgtccaga catgatccgt gatcctggct
      241 gccatcgctg gtgtcaccgg cgtccagcgc cgtttcgatc cctggcctcg ggtaggttct
      301 gggatcgata ggggctgccg caagctctcg tggggcagca ccagatgata gtacgccaag
      361 gacagccaga gttgtttttc cagccaggtc aattccttgc taaaaccatt ggttttgcga
      421 gtcagtcgcc ggttgcgctg gcgcaacgtc agattctctc gctccacata gctggtgttg
      481 acgatcgtgc tggtaggcag cgacgccaag cgggcggcga tcgcgtcggg ctctccaaag
      541 atgaccttgg tcgtcactgc cacgacgtgt cctcgtcggc ggtgtttgac gacctgcgca
      601 tagagcaagt caggaagcgg gagccgacgg ggctggggga aacgccctcg atgcccgttg
      661 cgcgccggtt gaacccactg cccatagact tgcaacaggg ccgtacggta ctcgggcaac
      721 tggtcgctgg tgaaaaacgg aatcccctga tcggtgacgt gcgctacgcg ttgcagcaac
      781 aggttagcat tcgcctggat gcgcttgccg accacaaagg ccagcaccat ccgccagcct
      841 ggcgcaaagg ccatccaaat ccaggcatcg ccataggatt cgcacacccg cttggccatg
      901 accaggtgag cctccttggt atggacaaag ctccacaact cgtccagttg gcattcggca
      961 accggcaagt ctcgccacag atacagcagg acctgccgac aatgttgggc cgcccggtcc
     1021 aaccagtcac aggcggtatc cttgtccact tgcacaatgc gggcggtgct ccgcagagaa
     1081 ttgccttcgg ccaatgctcg gatcgccatc tcgaagatca ccgcttcagc attcaaatcc
     1141 cagtaggccg tcccgtaccg caccgccaca ctctgtccac aggcccgaca caacgcctgt
     1201 ttctggccat gactggaccc atttttgacc aacctgctct gacgaaaggg aaccccataa
     1261 aatcgacagg aacgattcgg acaatagagc gtctcccagt ccatcgcatc ctcccggaac
     1321 acggcgtaag cactccggtg aggatacggt caaacagagt catcagacta actcatcaag
     1381 gcagttgagg gacactacca aatcttacac tatgcgtgct tatcttggtg cttggtgctt
     1441 ggtgcttgtg acaaaaggga tattgacgtg aaatatatca agaccttatt tatagtattt
     1501 attgtttggc tgttcctagg gatcatcttg ttcgtgtttc attcccattt tgtttatttc
     1561 cccttccgtc gccttgctgc ctcccccgat cagatcggac tgagctatga gaccgtctat
     1621 ttcacgactg aagatggttt aaagcttcat ggctggtatg tgcctgcagc ccatccgcgg
     1681 gcgaccttgc tggtttttca cggtaacggc ggtaatatct ctcaccggct ggagttactc
     1741 gcgatcttta accgattggc tgtcgatagc ttcatcatcg actaccgggg ctatggcctg
     1801 agtgagggaa agcccaccga agcaggcacc taccgcgacg ctttggcagc ctggcattac
     1861 cttacggtgg aacgcgagat cccggctaca cgcattcttg tgtttggaga atccctgggc
     1921 ggggccattg gctcctggct tgcgacccag atccggccag cgggcttgat cctgcaatca
     1981 ccctttacct ccattcgcga tatggcgcgt aaacattacc ccttttggcc cgtctctttg
     2041 ctcctccgga tccactatcc aaccctcgat aggatcagag cgatcaattg ccctattctc
     2101 atcgcccata gccgcactga cgagattgtt cccttcatcc agggtgagcg cctcttcaaa
     2161 gctgcccgag aacccaagcg gtttctcgag ctcagcggcg gacacaacga tggggttctg
     2221 gccacgggta agccctacat agcaggcctg gatgggtttt tctccgaggt cttgcaggat
     2281 gatcccgtgc tctccccgtg aagcg
//
LOCUS       DASQSL010000105         3302 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_138108, whole genome shotgun sequence.
ACCESSION   DASQSL010000105 DASQSL010000000
VERSION     DASQSL010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3302
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138108"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            30..106
                     /locus_tag="VE844_01100"
     tRNA            30..106
                     /locus_tag="VE844_01100"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:64..66,aa:Ile,seq:gat)
     gene            131..206
                     /locus_tag="VE844_01105"
     tRNA            131..206
                     /locus_tag="VE844_01105"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:164..166,aa:Ala,seq:tgc)
     gene            460..>3302
                     /locus_tag="VE844_01110"
     rRNA            460..>3302
                     /locus_tag="VE844_01110"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          799 a          782 c         1048 g          673 t
ORIGIN      
        1 gacgttgccg gccgcgtagt cgagattcag ggtctgtagc tcagttggtt agagcacacg
       61 cttgataagc gtggggtcgg tggttcaagt ccacccagac ccaccaacca actgttctcc
      121 cggaatttcc ggggccatag ctcagctggg agagcgcctg ctttgcaagc aggaggtcac
      181 cggttcgatc ccggttggct ccaccagtat ttcggttcta catgaagcct accgccaagc
      241 ggaatcctgg attcttcttg gccgtaagtt tcattcggct gctctttaaa aattcggaag
      301 aagtgaagcg aatccggttt tctcagaccg ggttcgtctg ggtagtgatt gcattattag
      361 ttgtcttagt aatgagtgat gaggctttgt cggcctcaga actcaccaag cgcttcctat
      421 ggttctggat gtcacgccga gtggtgttcg gggttatagg gtcaagtgaa caagtgcatg
      481 tggtggatgc cttggcgaca acaggcgacg aaggacgttg cagcctgcga taagccacgg
      541 ggagctggca agcgagcttt gatccgtgga tgtccgaatg gggaaacccg gcccgcaagg
      601 gtcactccct gccgaattca taggcagggt agagcgaacc tcctgaactg aaacatctca
      661 gtagggagag gaacagaaat caaccgagat tccgagagta gtggcgagcg aaatcggacc
      721 agcctctgcg atttagtcgt gtctctagcc gaactgtctg gaaagtcagg ccctagcggg
      781 tgatagcccc gtaggcgaaa aggctgtggt ggaactaggc gcaggacaag tagggcggga
      841 cacgtggaat cctgtccgaa gatgggggga ccatcctcca aggctaaata ctcgttgtcg
      901 accgatagtg aaccagtacc gtgagggaaa ggcgaaaaga accccgggag gggagtgaaa
      961 tagatcctga aaccgcatgc atacagacag tgggagcccg caagggtgac cgcgtacctt
     1021 ttgtataatg ggtcagcgac ttacgttcag tagcgagctt aaccgaatag ggaaggcgta
     1081 gcgaaagcga gtctgaatag ggcgattcag ttgctggacg tagacccgaa accagatgat
     1141 ctacccatgg ccaggctgaa ggttgggtaa caccagctgg agggccgaac gaaccactgt
     1201 tgcaaaagtg cgtcgatgag ccgtgggtag gggtgaaagg ccaaacaaat ctggaaatag
     1261 ctggttctcc tcgaaaacta ttgaggtagt gcctcgtggt acgccgccgg gggtagagca
     1321 ctgttaaggc taggggggca tggcgcccta ccaacccttg gcaaactccg aataccggcg
     1381 agtgaattta cgggagacag tgcaccgggt gctaacgtcc ggacacgaga gggaaacaac
     1441 ccagaccgcc agctaaggcc cccaagcgat agctaagtgg gaaacgaggt gggaaggcat
     1501 aaacagtcag gatgttggct tagaagcagc caccatttaa agaaagcgta atagctcact
     1561 gatcgagtcg tcctgcgcgg aagatgtaac ggggctcaag ctatctgccg aagctgcgga
     1621 tccgtggcgc aagccatgcg atggtagagg agcgttccgt aagcctgcga aggaggatcg
     1681 taaggtcctc tggaggtatc ggaagtgcga atgctgacat gagtagcgtt aatgcgggtg
     1741 aaaagcccgc acgccgtaag cccaaggttt cctgcgccac gttcatcggc gcagggtgag
     1801 tcggccccta aggcgaggcc gaaaggcgta gctgatggaa aacaggtcaa tattcctgta
     1861 cctcgccgtg atgcgatgtg gggacggaga aagttatgca ggccgggtgt tggttgtccc
     1921 ggtttaagca agtaggcgtg ccgcgtaggc aaatccgcgt ggcttagccg agatgcgaat
     1981 acgactgccc ttcggggcgg gaagctgcag atactctgct tccgggaaaa gccactaagc
     2041 ttcagtcacg gtgggaccgt accgcaaacc gacactggtg ggcgagatga atattctcag
     2101 gcgcttgaga gaactcggga gaaggaactc ggcaaattga caccgtaact tcggaagaag
     2161 gtgtgcccct agtaggtgaa ggcgtacagc cggagcccaa tggggtcgca gagaatcggt
     2221 ggctgcgact gtttattaaa aacacagcac tctgccaaca cgaaagtgga tgtatagggt
     2281 gtgacgcctg cccggtgccg gaaggttaag tgatggggtg caagctcctg atcgaagccc
     2341 cagtaaacgg cggccgtaac tataacggtc ctaaggtagc gaaattcctt gtcgggtaag
     2401 ttccgacctg cacgaatggc gtaacgctgg ccacactgtc tcctcctgag actcagcgaa
     2461 gttgaaatgg ttgtgatgat gcaatctacc cgcggctaga cggaaagacc ccgtgcacct
     2521 ttactgtaac tttgcattgg actgtgaacc gatctgtgta ggatagctgg gaggctttga
     2581 agcggtggcg ctagccatcg tggagccgtc cttgaaatac cagcctgatt tgtttgcggc
     2641 tctaaccttg gctcgtgatc cgggccgggg accgtgcatg gtaggcagtt tgactggggc
     2701 ggtctcctcc caaagagtaa cggaggagta cgaaggtacg cttaccacgg tcggaaatcg
     2761 tggctcaatg tgcattggca aaagcgtgct tgactgcgag actgacaagt cgagcaggtg
     2821 cgaaagcagg tcaaagtgat ccggtggttc tgtatggaag ggccatcgct caacggataa
     2881 aaggtacgcc ggggataaca ggctgatctc ccccaagagt tcatatcgac ggggaggttt
     2941 ggcacctcga tgtcggctca tcacatcctg gggctgtagc cggtcccaag ggtatggctg
     3001 ttcgccattt aaagtggtac gtgagctggg tttaaaacgt cgtgagacag tttggtccct
     3061 atctaccgtg ggcgttggaa gtttgagagg ggctactcct agtacgagag gaccggagtg
     3121 gacgcatccc tggtgtaccg gttgtcacgc cagtggcatc gccgggtagc tatatgcgga
     3181 agagataacc gctgaaagca tctaagcggg aaacttgccc caagatgaga cttcccggag
     3241 gcttgacctc cctaaagggt cgtcctagac caggacgttg ataggcggga tgtgcaagag
     3301 gc
//
LOCUS       DASQSL010000106         2299 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_151898, whole genome shotgun sequence.
ACCESSION   DASQSL010000106 DASQSL010000000
VERSION     DASQSL010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2299)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2299)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2299
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151898"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1109)
                     /locus_tag="VE844_01115"
     CDS             complement(<1..1109)
                     /locus_tag="VE844_01115"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HZB99999.1"
                     /translation="MNTQLSLILLALFSGPLAASPAIDTWTTANGARVLFVEARQLPM
                     VDVRIAFDAGSARDSDKAGLATLTNAVLAEGAGGLSAEQISERFEEVGTRFQNGVDRD
                     IAWVSLRSITEPANLEPALATLALVLKRPDFRSQALERERKRLLIALKQRQQDPGDIA
                     EDAFYANLYRNHPYASPVYGTEKALSALNRADLKIFFQRYYTAQNAVIAMVGDLTQAE
                     ARDLANKLVGRLAAGEKAEPLPAVPALSAPIEVKIAHPSSQTHIRFGQPGIARLDPDF
                     YALYVGNHALGGGGFISRLSKEIREKRGLSYSVYSYFLPMRVAGPFMAGLETRNEQVG
                     EALEVLRRTLREFIAQGSSPQEHQASLKNITGGFP"
     gene            complement(1106..>2299)
                     /locus_tag="VE844_01120"
     CDS             complement(1106..>2299)
                     /locus_tag="VE844_01120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006892866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HZC00001.1"
                     /translation="GVSHALEHMMFKGTQKHGPGEFSRIIAENGGQENAFTSDDYTAY
                     FQTLERSRLPVSFELEADRMRNLNLLEQEFAKEIKVVMEERRLRTEDRPQAFAYETAQ
                     ATAYQTSPYRHPVIGWMRDLEAMTVEDLRAWYRRWYAPNNAIVVVVGDVDPKAVYALA
                     KTYFGPLPAEPSGNDKPRSEVPQQGIKRVTVRRVAELPYLILAYKVPVLKTAIDQPDH
                     VPAWEVYALEVLAGLLGGGESARLNKNLVRGREIAASVGAGYSLISRLDSLFVFDGVP
                     AQGHTVEELEAGLREELKRMQDHLVDPKELQRVKTQVITNTIYEQDSMFYQAMQIGSL
                     ESVGLSWRLKDTYVDRIKAVTAEQVQAVARKYLVDDHLTIAVLDPVPAKGSNDHQPAT
                     RAIDR"
BASE COUNT          476 a          670 c          651 g          502 t
ORIGIN      
        1 aaagggaagc cgccggtgat gttcttgagg gaggcttggt gctcttgcgg gctagaccct
       61 tgcgctatga actcccgcag ggtgcggcgc aatacctcga gcgcctcgcc gacctgctcg
      121 ttgcgcgtct caagcccggc cataaacggt cctgctaccc gcatcggcag gaaatagctg
      181 taaacgctgt aagaaagccc gcgtttttca cggatctcct tgctcaaacg ggagataaaa
      241 ccaccgcccc caagcgcgtg attgccgaca tagagggcat aaaagtccgg atcgaggcgc
      301 gctatccccg gttgaccaaa gcgtatatgg gtctggctcg agggatgggc gatcttgacc
      361 tcaatcggtg ccgataaagc cggaacggcg ggcagcggct cggctttctc accggccgca
      421 agccttccta cgagtttatt cgccagatcc cgggcctcgg cttgagtcag atcccccacc
      481 atcgctatca cggcattttg ggctgtgtaa tagcgctgga aaaagatttt gagatcggca
      541 cggttaagcg cagagagagc cttttccgtg ccataaacgg gtgaggcata gggatgattg
      601 cgataaagat tggcatagaa ggcatcctcg gcaatatccc ccggatcctg ctgacgctgc
      661 ttgagcgcga tgagcaggcg tttgcgttcc cgttccagcg cctgagatcg gaaatccggg
      721 cgcttcaaga ctaaggccag ggtagcaagc gcaggctcca agtttgccgg ctcagtgata
      781 ctgcgtaggc tcacccaggc tatatcccga tcgacgccat tttgaaagcg ggtgccgacc
      841 tcctcgaagc gctcgctgat ctgttcggca ctcaagccgc ccgctccttc agccaggacc
      901 gcgttggtca gggtggcgag tcccgcttta tcgctatcgc gggcgctgcc tgcatcaaag
      961 gcgatccgga catccaccat cggtagttga cgggcctcta caaataagac ccgggcgcca
     1021 ttggcggtgg tccaggtgtc gatggcaggg ctggcggcta gtgggcccga gaagagcgca
     1081 agcaaaatca aggataattg ggtattcatc ggtctatggc tctagtagca ggttgatgat
     1141 catttgagcc tttagcgggc accgggtcga gcacagcgat ggtcagatga tcatcgacaa
     1201 gatatttgcg ggctactgct tggacctgtt ctgctgtcac ggccttgatg cggtcgacat
     1261 aggtgtcttt aagccgccag cttaagccta cgctctctaa ggagccgatc tgcatggcct
     1321 ggtaaaacat ggaatcctgc tcgtagatag tgttcgtgat cacctgggtc ttgacccgct
     1381 gcaactcctt gggatccacc aggtgatcct gcatccgttt tagctcctcg cgtaggcctg
     1441 cttctaattc ttccacggta tggccctggg ccgggacgcc atcgaaaaca aacaagctat
     1501 ccaagcgcga gatgagacta taacctgcgc ctacgctcgc ggcgatttcc cgaccccgca
     1561 ccagattttt attgaggcgt gcgctctccc caccgccgag caatcctgca agcacctcca
     1621 gggcataaac ctcccaagca ggtacgtgat caggttgatc gatggctgtc tttagcaccg
     1681 gaaccttgta ggctaggatc aggtagggca attccgccac ccgacgcaca gtgacccgtt
     1741 tgataccctg ttgcgggact tcagaccgtg gcttatcgtt gccggacggt tcagccggca
     1801 gcggcccaaa ataggtcttg gccaaggcat acaccgcttt gggatcgaca tcgccgacca
     1861 ccactacaat ggcgttattg ggcgcatacc agcgtctata ccaggcgcgc aggtcctcca
     1921 ccgtcatggc ttccagatcc ctcatccagc caatgacagg atgacggtag gggctggtct
     1981 ggtaggcggt ggcctgagcg gtctcatagg caaacgcctg gggtctatcc tcggtccgga
     2041 gtctgcgttc ctccatcacc accttgatct ccttggcgaa ttcttgctca agcagattca
     2101 aattgcgcat cctatcggct tccagctcaa agctcacggg cagccgggat ctttcaagcg
     2161 tctgaaaata ggccgtgtaa tcatcactgg taaaggcatt ctcctggcca ccgttctcgg
     2221 cgatgatccg cgagaactcc ccgggtccgt gcttttgcgt gcctttgaac atcatatgtt
     2281 cgagcgcatg ggagacccc
//
LOCUS       DASQSL010000107         1881 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_124536, whole genome shotgun sequence.
ACCESSION   DASQSL010000107 DASQSL010000000
VERSION     DASQSL010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1881)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1881)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1881
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124536"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..190)
                     /locus_tag="VE844_01125"
     CDS             complement(<1..190)
                     /locus_tag="VE844_01125"
                     /inference="COORDINATES: protein motif:HMM:NF013828.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZC00002.1"
                     /translation="MNSLDLLLRELRLGTMMRHAQEVAIRAEREGWSFTRYLHDLMEM
                     ELLERGQRRIQKRLKESGL"
     gene            complement(187..1671)
                     /locus_tag="VE844_01130"
     CDS             complement(187..1671)
                     /locus_tag="VE844_01130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HZC00003.1"
                     /translation="MTTTDRQVKIIMNELSKHGDQGRAAAKVGVCRQTAARYIQAGKL
                     PSELKQAHLWQTRGNPFAEVWPEIEARLRQEPGVWIRFLFEDLQERYPGRFTPGQVRT
                     LHRHVAKWRALHGEDQGHEVFFPQQHRAGEAGQSDFTHTQSLAMSLEGQAFAPLLCHF
                     VLPYSNWEWACRCQSESLLALKKGVQEAVFRLGRVPEWHQTDNSCGATHQVSTGGRAF
                     LPEYLELMAHLGMKPRTTAIGKKEQNGTVEAQNGAFKRYLDQRLQARGSRGFATVDAF
                     DEWLVESLSKETSRRQVRLQEELAVMKPLPVTRMPEYREQAVRVSRNSTINVMHNLYS
                     VPPRLMHNVVRVRLYEDTLEVYYHHALIQTMPRLVGRAHHQVNYRHVIWSLVHKPGAF
                     ARYRYREELYPSLTFRKVYERLQQVWPGTKGDAAYLRILHLAASTLESEVQVALELLL
                     ENGVLPTIEAVRDLVGPLPPESPVLPVPKVDLGTYDQLLEGAAR"
BASE COUNT          366 a          603 c          498 g          414 t
ORIGIN      
        1 gtaaacccga ctccttgagc cgtttttgga tccggcgctg cccgcgttcg agcagttcca
       61 tctccatgag gtcatgcagg tagcgggtaa agctccagcc ctcgcgttca gcccggatag
      121 ccacctcctg cgcatggcgc atcatcgtac ccaagcgtag ctcccgtaac aggagatcta
      181 gactgttcat cgggctgccc cctcaagcag ttggtcatag gtgccgagat ccaccttggg
      241 taccgggagc accgggctct caggcgggag cggcccgacc aagtcccgca ccgcttcaat
      301 ggtcggtagg accccgttct ccagcaggag ctccagagct acctgcacct cactctccag
      361 cgtggaggcg gcgaggtgca ggatccgcaa gtaggccgca tcccctttgg tccccggcca
      421 gacttgctgt aaccgctcat agaccttacg gaaggttaag ctgggataaa gctcctcccg
      481 gtatcgatac cgggcaaagg ccccgggctt atgcaccagc gaccagatca catgccgata
      541 gttgacttga tgatgcgccc gcccaaccag ccgtggcata gtttggatga gggcgtggtg
      601 ataatagacc tcaagtgtgt cttcatagag gcgtacccgc acgacgttgt gcatcaagcg
      661 cggcggcacc gagtagaggt tatgcatgac gttgatggtg ctgttgcgac tgacccgtac
      721 cgcctgttcc cgatactcag gcattcgggt caccggtaag ggtttcatga ccgcgagctc
      781 ctcctgcagc cgcacctgcc ggcggctagt ctccttggag agactctcca ccagccactc
      841 gtcaaaggcg tccacggtgg caaatcctcg gctcccccgc gcttgcaggc gttgatccag
      901 atagcgcttg aaagccccat tttgcgcctc gaccgtccca ttctgctcct tcttaccgat
      961 cgcggtggtc cgcggcttca tcccgagatg cgccatcaac tccaggtatt cgggcaaaaa
     1021 cgcccgccct cctgtggaga cttgatgcgt cgccccacac gaattatccg tctgatgcca
     1081 ctccggcaca cgtcccaggc gaaataccgc ctcttggacc cccttcttca gcgccaatag
     1141 cgattccgat tgacagcggc aggcccactc ccaattcgaa tagggcagca caaaatgaca
     1201 cagcaacggg gcaaaggctt ggccttccaa gctcattgcc aggctctggg tgtgagtgaa
     1261 gtcgctctgc cccgcctcac ccgcgcgatg ctgttgcgga aagaacacct catgcccttg
     1321 gtcttcgcca tgcagcgccc gccacttggc aacatgccga tgcagcgtcc gcacttgccc
     1381 gggggtaaag cgccccggat agcgttcctg taagtcctca aacagaaaac gtatccatac
     1441 ccccggttct tgcctcagcc gcgcctcaat ctccggccat acctcggcaa acggattgcc
     1501 ccgcgtttgc cacaggtggg cctgcttcag ctcggaaggc agcttaccag cttgaatata
     1561 gcgggccgcc gtttgtcggc ataccccgac cttggccgcc gctctccctt ggtccccatg
     1621 tttgctcagc tcgttcataa tgatcttcac ctgtcgatct gtggttgtca ttctccttgt
     1681 cctctctcaa cccgaaagag aacaagcttg tcttattcac aggtgactgg ctgcaatgtt
     1741 aatttttaat tgtcagtgat gttattttct aattgtcact gagcagttat cgctcggaaa
     1801 atgccctctt tcgggaaatg cttgaggaac tcgtgctacc cccgtagtgc aaaagggtga
     1861 tcgtggtggc cgatgcggct t
//
LOCUS       DASQSL010000108         1001 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_42014, whole genome shotgun sequence.
ACCESSION   DASQSL010000108 DASQSL010000000
VERSION     DASQSL010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42014"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(326..>1001)
                     /locus_tag="VE844_01135"
     CDS             complement(326..>1001)
                     /locus_tag="VE844_01135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012876052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HZC00004.1"
                     /translation="VAVDYRSHPDEAKELVEQVKGSGGTAISVHADVSSPEDVKNLIQ
                     NAVAEFGRLDVMVNNAGMEEKMPFLDTPLEVWNKTIAVNLTGAWLGCQEAAKQMVSQD
                     GTGRIINVSSVHEDLPMPTNSSYCATKGGLRMLMRTIAVELASHNITVNNIAPGAVDT
                     PMDAPLKEDTNQMQKLLSEIPLRRMGKPEEVAALAVYLASDAAAYVTGSTFVIDGGMM
                     RHSGRL"
BASE COUNT          185 a          309 c          283 g          224 t
ORIGIN      
        1 tgcgcaacta cgtgattgtt gcgatactgc acttctagtc gagcgcatcg gagagagttg
       61 gagacgtact tgacctaacg caccgcaacc gtcaaatggt ctagcagcga acgtcttacc
      121 tgtcctccag cagctccggc tagtgctctc tcagcatgca gtgcaactcc cccacgacat
      181 cgccggtagg caggttcggc tgcaacgcct cttccacttc caaggcctcc aatgccaccg
      241 cgtaccagtg cccaacaagg ctgatcccgc ttgttatggc ggaaattagg cgtgtcccgt
      301 cgctggtcgg cagagacgcg tgtgatcata gccttccgga gtgacgcatc atgcctccgt
      361 ctatcacgaa ggtgctgccc gtcacgtagg cggcggcgtc ggaagctagg tacacggcca
      421 gggcggcaac ctcctccggc ttccccatcc gccggagagg tatctctgac agaagcttct
      481 gcatctggtt agtgtcttcc ttgaggggag catccatcgg cgtgtccaca gcgcccggag
      541 ctatgttgtt gacggtgatg ttgtgtgagg ccagctcaac ggcgatggtg cgcatgagca
      601 tcctcaagcc ccccttggtg gcacagtacg aagagttggt aggcatgggc agatcctcgt
      661 gcaccgacga gacgttgatg atgcgcccag ttccatcctg gctaaccatc tgcttggccg
      721 cctcctggca accgagccat gctcccgtga ggttcacagc gatagtctta ttccacactt
      781 ccagtggggt gtcgaggaac ggcattttct cttccatacc ggcgttgttg accatcacgt
      841 cgagccggcc gaactctgca acagcattct ggatcaggtt cttcacgtcc tcggggctcg
      901 agacgtccgc gtgtacggag atggccgtgc ccccggagcc ttttacttgt tcgactaact
      961 ccttggcttc gtcagggtgg ctccggtaat ccacggcgac c
//
LOCUS       DASQSL010000109         1323 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_151922, whole genome shotgun sequence.
ACCESSION   DASQSL010000109 DASQSL010000000
VERSION     DASQSL010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1323
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151922"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(190..>1323)
                     /locus_tag="VE844_01140"
     rRNA            complement(190..>1323)
                     /locus_tag="VE844_01140"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          246 a          420 c          345 g          312 t
ORIGIN      
        1 cttcgcgatg gcttggatcg gctgaagagt gacaggaatc tcacgtattt cagcgggaat
       61 caggtcgtca gtttcgaggg cggtccagct cattcaccga tgctccctcg agcatcggtc
      121 cttgcggcga gctggccgat cgacctggga tcggaggatc cggcgaaccg gctccccatt
      181 tctccctaga aaggaggtga tccagccgca ccttccggta cggctacctt gttacgactt
      241 cgtcccaatc accaatccca ccttcgacgg ctgcctcctt gcggttggcc caccggcttc
      301 gggtgttgcc agctttcatg acgtgacggg cggtgtgtac aaggcccggg aacatattca
      361 ccgcagtgtg ctgacctgcg gttactagca actccggctt catgcaggcg agttgcagcc
      421 tgcaatccga actgagaccg gctttgaggg attagctcca cctcgcggtt tggcaacccg
      481 ttgtaccggc cattgtagcg tgtgtgtagc ccaggacgta agggccatgc tgacttggcg
      541 tcatccccac cttcctccga gtttctctcg gcagtctggc atgagagata caacatgcca
      601 cgggggttgc gctcgttgcg ggacttaacc caacatctca cgacacgagc tgacgacagc
      661 catgcaacac ctgcatgacg gtcccttgcg ggaggacgac gtttccgccg ttttccgcca
      721 catgtcaagc cctggtaagg ttcttcgcgt tgcgacgaat taaaccacac gctccgctgc
      781 ttgtgcgggc ccccgtcaat tcctttgagt tttagccttg cggccgtact ccccaggcgg
      841 gacacttaat gcgttagctt cggcactggc ggggttgata ccaccaacac ctagtgtcca
      901 tcgtttacgg ctaggactac cggggtatct aatcccgttt gctcccctag ctttcgcgcc
      961 tcagcgtcaa gaatgggcca ggtagtcgcc ttcgccactg gtgttcctcc cgatatctac
     1021 gcatttcacc actacaccgg gaattccact accctctccc accttcaagc cgatcagttt
     1081 ccgatgcagt ttcccggttg agccggaaga tttcacatca gacttaatca gccgcctgcg
     1141 cgctctttac gcccagtaaa tccggacaac gcttgccacc tacgtattac cgcggctgct
     1201 ggcacgtagt tagccgtggc ttattcacca ggtaccgtca tcatcgtccc tggaaaaaga
     1261 ggtttacgac ccgaaggcct tcatccctca cgcggcgttg ctgcttcagg ctttcgccca
     1321 ttg
//
LOCUS       DASQSL010000110         2375 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_42016, whole genome shotgun sequence.
ACCESSION   DASQSL010000110 DASQSL010000000
VERSION     DASQSL010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2375
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42016"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            819..1631
                     /locus_tag="VE844_01145"
     CDS             819..1631
                     /locus_tag="VE844_01145"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HZC00005.1"
                     /translation="MDGVTIERFEENLKGNLYQLWNRMSSGSYFPGAVRAVEIPKSGG
                     GVRVLGIPNVVDRIAQTVAVMMLEPGVEQVFHEDSFGYRPERSALDAVAVCRKRCFRN
                     DWVLDMDIRKFFDTVPWDLMEKAVARHTDQKWILLYVGRWLRALLQMQDGTVVRRDKG
                     TPQGAAISPLLANLFMHYAFDMWMKREFPGIRFERYCETWWSTVSANVKPASCGTRSP
                     AGWPRLGWNFILTRPVWSIVRTVDDAEHMNRYRSRSWVTSSDPGKLSIGNTE"
     gene            1679..1969
                     /locus_tag="VE844_01150"
     CDS             1679..1969
                     /locus_tag="VE844_01150"
                     /inference="COORDINATES: protein motif:HMM:NF019984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron maturase-specific
                     domain-containing protein"
                     /protein_id="HZC00006.1"
                     /translation="MSRRIRSWRLHRRVNLTLDYLAEDINQVVRGWLAYFTRFYPTAV
                     GPLCQRINGHLMRWARKKYKRLRSQKRARTWLKGVMVRAPGMFAHWAVSSAL"
     gene            2159..>2375
                     /locus_tag="VE844_01155"
     CDS             2159..>2375
                     /locus_tag="VE844_01155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008672613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZC00007.1"
                     /translation="MLIWEAYLKVSSNKGAAGVDGKSLAEFEQDLQNNLFKLWNRMSS
                     GSYFPGPVKAVPIPKNGGGTRILGVPTV"
BASE COUNT          499 a          549 c          851 g          476 t
ORIGIN      
        1 ttgtggggtg gggtgccaag aggaagagcg gtgagcggca gcaaccgtga gccgttgagt
       61 actgatgcgg tactcgctgg cggaccggct cgtagtagtg cggaagctcc tgtaatgggg
      121 gtggagcttg tgaacacgaa cgtggaaggc ggggtcggga tagggatggc gggccttgct
      181 ggaagcggtg ctgtacgagt gatggaggtt ggttggccct ccggagccgc cctgcggggg
      241 gtggttccaa accaccgtgc gctgcgtccg ttaacggcgg ttcgtggtga gcggcacgga
      301 aaaggcgcgc cagtgagtgc gtcaggtacg ggtcgggaag atgagcggaa gcgaactgtc
      361 agtgacgtgt cgaaacctat ttagttgaca tcagaaccgg ggttggttcc gcatcccggg
      421 atgagtctgg gggatacccg tttactgccc aggcggtgtc cggcatacag gcagcatgag
      481 cccgatccag gctctcgtat ggaacgtgtg aaggtgtcgc cccgacactg ttgccgggag
      541 attttggtag cgagagggag cgcctcaagc ggcagaaacc gcgaggggtt gagtaccggt
      601 tgcggggcac gctggcggac tggcctgtag tagctgtgaa acctggtaat tcgggtggag
      661 ccaaggggct gggtcgttcg tggtttgtgg atgtggccaa ccagaaggga tgaaccgcgt
      721 gcatggaccg aagaatcagg gaaaatcgtt cgatattccg aagcgactgg tatgggatgc
      781 gtacctgaaa gtgaggggag aacaagggag cggccggggt ggatggcgtg acgatcgagc
      841 ggtttgagga gaacctgaag ggaaatctct atcaactgtg gaatcgcatg tcatcgggtt
      901 cgtatttccc cggggcggtc cgggcggtgg aaatacctaa gagtggcggc ggggtgagag
      961 ttttaggcat tccgaatgtt gtggaccgga ttgcgcaaac ggtggcggtg atgatgttgg
     1021 agccgggcgt ggagcaggta tttcacgagg actccttcgg gtatcgtccc gagcgttcgg
     1081 ctctggacgc ggtagcggtg tgcaggaaac gatgcttcag gaacgactgg gtcttggata
     1141 tggatatccg gaagttcttc gacactgtgc cctgggatct gatggagaaa gcggtagcgc
     1201 gccacacgga tcagaaatgg atcctgctgt atgtggggcg ttggctgcgg gctctattac
     1261 agatgcagga tggcacagtg gtgcgccgtg ataagggtac gccgcaaggt gcggcgattt
     1321 ccccgttgtt ggcgaatctg ttcatgcatt acgcgttcga catgtggatg aaacgggagt
     1381 tcccgggaat ccgattcgag cgctattgcg agacgtggtg gtccactgtg tcagcgaatg
     1441 tcaagcccgc ttcgtgtggg acacggtcgc cggccggttg gccgaggttg ggttggaact
     1501 tcatcctgac aagacccgtc tggtctattg taaggacagt agacgacgca gaacacatga
     1561 acagatatcg ttcacgttcc tgggttacca gttccgatcc agggaagctt tcgataggaa
     1621 acacggagta gccttcaccg ggttcctacc gggagtcagc ccggacaaac tgacggagat
     1681 gagccgccgg ataaggtcgt ggcggctgca tcgacgggtc aacctcactc tcgactacct
     1741 cgcggaagac atcaatcagg tcgttcgcgg gtggctcgcg tacttcaccc ggttctatcc
     1801 gaccgcggtg ggtcccctct gtcaacgcat caacggccat ctgatgcggt gggcgcggaa
     1861 gaaatacaaa cgactgcgga gccaaaaacg ggcacggaca tggctgaaag gcgtgatggt
     1921 aagagcgccg ggcatgttcg cgcactgggc ggtctccagc gctctctgag gatggacgac
     1981 acgagccgta tgagccgcga ggctcacgta cggatctgtg ggggccggcg ggtgaaactc
     2041 ccgccggcta cccggcgaag gggacgtgcc gtcgagtgtc gtccagcgat caaccagaaa
     2101 cggaaggaat tgcgtgggcg agacaaaatc agcggggaag tcgtttgaca ttccaaagat
     2161 gttgatatgg gaagcatacc tgaaggtcag tagcaacaag ggtgcggcag gggtcgacgg
     2221 aaagtctctg gcggagtttg aacaggatct tcagaataac ttgttcaagc tgtggaacag
     2281 gatgtcgtcg gggagttatt tcccagggcc ggtcaaggcc gtccccattc cgaagaatgg
     2341 tgggggcaca agaattctag gtgtgcctac cgtcg
//
LOCUS       DASQSL010000111         1014 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_27865, whole genome shotgun sequence.
ACCESSION   DASQSL010000111 DASQSL010000000
VERSION     DASQSL010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27865"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..902)
                     /locus_tag="VE844_01160"
     rRNA            complement(<1..902)
                     /locus_tag="VE844_01160"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          166 a          347 c          266 g          235 t
ORIGIN      
        1 ttcggagaga accagatatc tccgggcttg attagccttt cactccgacc cacaggtcat
       61 ccgcccagtt ttcaacctag gtcggttcgg ccctccacgg ggtcttaccc ccgcttcagc
      121 ctgcccatgg gtagctcgct cggtttcggg tctaccgcca ctgactgagt cgccctgttc
      181 ggactcgctt tcgctgcggc tccgctcatc gcttaacctt gccagggacg agtaactcgc
      241 cggctcgtta tgcaaaaagc acgccgtcag gccgaagccc tccgaccgct tgtaggcacg
      301 cggtttcagg tactatttca ctccccttcc ggggtactat ttcacctttc cctcacggta
      361 ctagtccgct atcggtcacc agggagtact tagccttgga gggtggtccc cccggattca
      421 gaccgcgttt cacgtgcgcg gtcctactca ggaaagcctc cgggaggcca tgcgctttcg
      481 cctacgggac tgttacccgc tgtggtgcaa gtattccacg agcttcggct aacgcacgac
      541 tttgtaactc ccgccaggca gcgcagtgcc tgggaaagac ttcctacaac ccccggcagg
      601 caacgcctgc acgcttacac ctgccaggtt tgggctgatc ccctttcgct cgccactact
      661 cggggagtct cggttgattt cctttcctcg gggtactgag atgtttcact tcccccgctt
      721 gccctcgtgc tcctatgtgt tcagagcacg atgacgccgc actaccggcg ccgggttctc
      781 ctattcggga atccacgggt cactggccgt tcaacgccta accgtggctt agcgcagtcg
      841 tccacgccct tcatcgtctc ctggtgccaa ggcatccacc atgtgccctt actatcttga
      901 cggtgatcac aactcgggcc cgccggctgt cgccgacgga ccgagaagat gcccagcttg
      961 ctacttgcca acgtgtgcgg ttttcaaggg ccggcgagaa gcctcgcccg ggac
//
LOCUS       DASQSL010000112         1600 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_1000, whole genome shotgun sequence.
ACCESSION   DASQSL010000112 DASQSL010000000
VERSION     DASQSL010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1000"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..343
                     /locus_tag="VE844_01165"
     CDS             <1..343
                     /locus_tag="VE844_01165"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012970713.1"
                     /note="Catalyzes the only substrate-level phosphorylation
                     in the TCA cycle; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HZC00008.1"
                     /translation="IGGDPIHGMDFVDCLKLFEQDPETKGIMLVGEIGGTGEEEAAAY
                     IKSEIGKPVVAYIAGVTAPAGRRMGHAGAIIAGGKGTAEDKYRALEAAGVHTVRSPAE
                     LGASIAACLKG"
     gene            431..>1600
                     /locus_tag="VE844_01170"
     CDS             431..>1600
                     /locus_tag="VE844_01170"
                     /EC_number="6.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012699840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003952 - NAD+ synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HZC00009.1"
                     /translation="MPSAKLRIALAQLNLMVGDIAGNTERVIAAACQARDESKADLIA
                     FPELSLTSYPPEDLVLRPGLWRQIQAALEKLRETVAGIDLVVGYPLRENDRLFNACSL
                     IRAGRIVATYRKQHLPNYSVFDEKRYFQAGTSPAVVDIKGIPIALSICEDIWVPGTAR
                     QAKEAGAALILNINASPFHTDKALEREQVLKATVAEGGLPVVYLNLVGGQDELVFDGG
                     STVMDKNGTICWRAPDFTEGLYTVDFEDKDTVTPLPSACSPPLRGEESFYRALLLGVR
                     DYVHKNGLNGVVLGLSGGIDSALTLVLAVDALGKERVEAVLMPSRYTAKMSVEDACTE
                     AENLGVEYHLIPIEPAFTAFNESLHDTFTDRPPDTTEENIQARCRGVLLMAISNKK"
BASE COUNT          340 a          469 c          486 g          305 t
ORIGIN      
        1 gatcggcggc gatccgatcc atggcatgga tttcgtcgat tgccttaagc tgtttgaaca
       61 ggacccggaa accaaaggta ttatgctggt cggcgagatc ggcggcacgg gagaggaaga
      121 ggccgcagcc tatatcaaat ccgagatcgg caaaccggtg gtggcctata tcgccggagt
      181 caccgcgccg gccggcagac gtatgggtca cgccggtgcc atcatcgccg ggggcaaagg
      241 caccgcggag gataaatacc gggcgttgga ggcggctggc gtgcataccg tccgctcacc
      301 ggcggaactg ggggccagca ttgcggcgtg ccttaaaggc taatgtccac cgccaggctg
      361 cacaatccac ccttgcgcat attcgtgagg agtgaggagt gaggggtaag gggtgagggg
      421 tgaggcgcta atgcccagtg ccaaacttcg tatcgccctc gcccaattaa atctcatggt
      481 gggggatatt gccggcaaca ccgagcgggt tatagcggct gcttgccagg ctcgggatga
      541 gagcaaggct gatctcatcg ccttcccgga actgagcttg accagttatc ccccggagga
      601 cttggtattg cggcccggcc tttggcggca gatccaagcc gcgcttgaga aactccgaga
      661 gaccgtagca ggcattgacc tcgtcgtcgg ttaccccttg cgggaaaacg atcgactgtt
      721 caatgcctgc tcgcttattc gtgccggaag gatcgttgcc acctaccgca aacaacacct
      781 cccaaactac agcgtcttcg acgagaagcg ctatttccaa gccggcacaa gcccggcggt
      841 ggtcgatatc aaggggatcc cgatagcgct gagcatctgc gaagacatct gggtccccgg
      901 caccgcccgg caggccaagg aggccggggc tgcgttgatc ctcaatatca acgcctcacc
      961 cttccatacc gataaggccc tggagcggga acaggtatta aaggctactg tcgcagaagg
     1021 agggctgccg gtcgtctacc tcaatctcgt gggcggtcag gacgaattgg tgtttgacgg
     1081 gggctccacc gtcatggata aaaacggcac gatttgctgg cgtgcccccg atttcaccga
     1141 aggtctttac accgtggatt ttgaggacaa ggataccgtt acgcctctgc caagcgcatg
     1201 ctccccgccg ttacgcgggg aagaaagctt ctatcgcgcc ttgctccttg gggtgcggga
     1261 ctacgttcac aagaacggcc tcaacggcgt ggtcttgggg ctctcgggcg ggatcgattc
     1321 agccttgacg ctggtcctcg ccgtcgatgc gctgggaaaa gagcgggtcg aggccgtgct
     1381 catgccctcg cgctataccg cgaagatgag cgtcgaggat gcctgcaccg aagcggagaa
     1441 tttaggtgtc gaataccacc tcatccccat tgaacccgcc tttaccgcct tcaatgaaag
     1501 cctgcacgat acctttaccg atcgcccgcc cgacaccacc gaagagaaca tccaggcacg
     1561 ctgtcgcggc gtgctgctca tggccatctc caacaaaaaa
//
LOCUS       DASQSL010000113         1766 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_55838, whole genome shotgun sequence.
ACCESSION   DASQSL010000113 DASQSL010000000
VERSION     DASQSL010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1766
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55838"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1706
                     /locus_tag="VE844_01175"
     CDS             <1..1706
                     /locus_tag="VE844_01175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HZC00010.1"
                     /translation="TGEYARVRAALQHEFRPGAREPAQKEPGQPRIVVADDDRGVRLA
                     LRNVLERDRYQVEEASNGLQALTLCQRRTPDLVLMDARMPALDGFAACRRIHDLPDST
                     HLPIVMITALDDEQSIEQAFAAGANDYIPKPVNFAVLRQRVARIVDASRAEKHVHQLA
                     YRDPLTDLANRTAFRERLDGLLSRGCQEDQSHALLFLDLDRFKLVNDTLGHETGDRLL
                     KTVAERVAGCVRAGDMVSRLGGDEFIVMLENINSPMVATLVAEKICHVIARPFVLLGR
                     QIYLSTSIGISLYPADSQDGGTLIKYADMAMFRAKEHGNTYRFYEPSMEAAVLQKLDL
                     ESGLRRALDRNELVLHYQPRVDLRSGKIVSMEGLIRWRHPQLGLVSPAQFIPLAEETG
                     LIEPIGAWVLRTACAQNKAWQDEGLARIPVAVNLSARQLRQGTIEDSILKVLADTGLD
                     PVYLDLELTESMIMKEPGEMRRILRRLKDIGVLLSIDDFGTGYSSLNHLKYFSFDTLK
                     IDQSFVRDLIINPSDAMIVLAIIAMARSFRIRVVLRVSRPKLNCAICNRTVAMRSRVI
                     M"
BASE COUNT          384 a          485 c          520 g          377 t
ORIGIN      
        1 tcaccggcga atatgctcgc gttagagcag cattgcagca tgagttccgg ccgggtgcac
       61 gcgaaccggc tcagaaagag cccggtcagc cgcgtatcgt cgtcgccgac gacgatcgcg
      121 gagtgcgcct ggcgctgcgc aacgtgctcg aacgggatag ataccaggtc gaggaagcaa
      181 gcaacggcct ccaagcgctc acgctgtgcc aacggcgcac gcccgatctg gttctgatgg
      241 atgcccgaat gccggcactg gatggcttcg ctgcctgcag gcggatccat gatctcccgg
      301 acagcaccca cttgccgatc gtgatgatta cggcactcga tgatgaacag tctatcgaac
      361 aagccttcgc agcgggcgcc aacgactaca tcccaaagcc ggtgaacttt gccgtattgc
      421 gacaaagagt cgcccgcata gtggatgcta gccgtgccga aaaacacgtg caccaactcg
      481 cctaccggga ccccctgacg gatctggcga accgtaccgc tttcagggag cggctcgatg
      541 ggttattgag tcgagggtgc caggaagatc agagccatgc cctgctattt ctcgatctgg
      601 atcgtttcaa gttagtcaat gacacgctcg gtcatgaaac cggcgatcgc ttgttgaaga
      661 ctgttgccga gcgggttgcg ggttgtgttc gggcgggtga tatggtatcg agactaggcg
      721 gtgatgagtt cattgtcatg ctggagaata tcaactcacc catggtagct accctcgtgg
      781 cggagaagat ctgccacgtg atagcccggc cttttgtctt gctggggcgg caaatatact
      841 tgagcaccag catcggaata tcgctatacc cggccgatag tcaggatggc gggacactga
      901 tcaagtatgc cgatatggcg atgttccggg ccaaggaaca cggcaacacc tatagattct
      961 atgaaccgag catggaggcc gccgtcttac agaagctcga tctagagagt gggctacggc
     1021 gcgccctcga tcgcaatgaa ttggtcttgc attatcagcc gcgcgtggac ctccgtagcg
     1081 gtaagatagt cagtatggag ggtttgatcc gttggcggca cccacagctc ggactggtct
     1141 cgccggccca gttcatcccc ctggctgagg aaaccggttt gatcgaaccc atcggggcgt
     1201 gggtactgcg aacggcttgc gcccagaaca aggcctggca ggatgagggg ctagcgcgaa
     1261 ttccggtggc ggtcaatctc tctgcccgcc agctcagaca aggcacgata gaggattcca
     1321 tcctgaaggt attggccgat accggcttag acccggtgta tttagatctt gagcttaccg
     1381 aaagcatgat catgaaagag ccgggggaga tgcgccgtat actcaggcgc ttaaaggaca
     1441 tcggcgtcct cctatccatc gatgatttcg gtaccggcta ttccagtctc aatcacctca
     1501 aatacttctc gtttgatacg ctcaagatcg atcaatcctt tgtccgcgat ctgatcatca
     1561 acccaagtga cgccatgatc gtcttggcta tcatcgctat ggctcgcagt tttaggatcc
     1621 gagtggtcct gagggtgtcg agaccgaagc tcaactgcgc tatctgcaac agaacggttg
     1681 cgatgagatc cagggttatt atgtaagccg gccggtgccc tccgatgaag ccgggcggtt
     1741 acttcgggaa gatcggccgc tgcttt
//
LOCUS       DASQSL010000114         1024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_124553, whole genome shotgun sequence.
ACCESSION   DASQSL010000114 DASQSL010000000
VERSION     DASQSL010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124553"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..713
                     /locus_tag="VE844_01180"
     CDS             <1..713
                     /locus_tag="VE844_01180"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0052621 - diguanylate cyclase activity
                     [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sensor domain-containing diguanylate cyclase"
                     /protein_id="HZC00011.1"
                     /translation="AQLRLALQASTRACGIGTSRPTRSIFHRSGNISSAWKHQLGYEN
                     HEIPNRYEEWEARLHPEDRTRTLNAVRASIKDPAPAYEVEFRLRHKDGSYRWILARVS
                     LLQDPEGHAYRMLGSHTDITERKEAENQLASSRFTTGPLGLRIANDTLGHEAGDCLLK
                     QAAERLRTQVRESDAVARLGGDEFIIILINIARPEDVAQVARKILKALSAPVDIGGDE
                     IVLSRVSVSASLRRMAVM"
     gene            710..>1024
                     /locus_tag="VE844_01185"
     CDS             710..>1024
                     /locus_tag="VE844_01185"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HZC00012.1"
                     /translation="MKTLLRHADAALYYAKEGGKNGYCFHTASLSARAHHRLTVESGL
                     RRALNRHEFLLEYQPVVTHGGLISAAEALLRWRHPEQGVISPAEFISVAEESGLIIPI
                     GEW"
BASE COUNT          231 a          296 c          300 g          197 t
ORIGIN      
        1 aggcacagct tcggttggcc ctgcaggcat caacacgggc ctgtgggatt ggaacctcaa
       61 ggccaacgag gtctattttt caccggagtg gaaacatcag ctcggcgtgg aaacatcagc
      121 tcggctatga gaaccatgag attcccaatc gctacgagga gtgggaagca cggctgcacc
      181 ccgaagaccg aacccggaca ctcaatgccg tgcgggcgag catcaaagac ccggcccccg
      241 cttatgaggt ggagttccgt ctccgccata aagacggttc ttatcgctgg atactggcgc
      301 gtgtctcgct gctgcaagat cccgaaggcc acgcctaccg gatgctcggc tcacatacgg
      361 acatcactga gcgcaaggag gctgaaaacc agctcgcgag ctcgcgcttt acgacaggcc
      421 cactgggctt gcgaatcgcc aatgatacgc tgggccacga ggcgggcgac tgtctgttga
      481 agcaagccgc cgagcgcctg cggacgcagg tgcgggagag cgatgcagtc gctcggcttg
      541 ggggtgacga gtttatcatt atcttaatca acatcgctcg accggaagac gtggctcaag
      601 tggcacgtaa gatattgaag gccctctcag cccctgtcga tattggcgga gatgagattg
      661 tcctcagccg agtatcggta tcagcctctc tccggaggat ggcagtgatg tgaagacctt
      721 actccgccac gccgatgccg cactctatta cgccaaagag ggtggaaaaa acggttattg
      781 cttccacacg gcatcgctca gtgcacgcgc tcaccacagg ctaactgtcg agagcggctt
      841 gcgacgcgcc ctcaatcgac acgaattctt actcgaatac caacctgtcg tcacacacgg
      901 gggactgatc agcgctgcgg aagcgttgct ccgctggcgt catccagaac agggcgtcat
      961 atcgccggct gaattcatct ctgtggctga agagagcgga ctcatcatcc ctattgggga
     1021 atgg
//
LOCUS       DASQSL010000115         6158 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_14687, whole genome shotgun sequence.
ACCESSION   DASQSL010000115 DASQSL010000000
VERSION     DASQSL010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 6158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6158
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14687"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1424
                     /gene="glgP"
                     /locus_tag="VE844_01190"
     CDS             <1..1424
                     /gene="glgP"
                     /locus_tag="VE844_01190"
                     /inference="COORDINATES: protein motif:HMM:TIGR02094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-glucan family phosphorylase"
                     /protein_id="HZC00013.1"
                     /translation="QIHGEVAARMEAYVWPEVPPSENLMDYITNGVHVPTFLAAAWVN
                     LFDLRWGVQWRNEFLNRTFWERIDDLPDSAFWSVRQLLRFDLLREIKVRATAQFRRNG
                     YSPSLIKRLTRYLGTDGDMLVLGFARRFATYKRATLLFTDPERLARLLSDPNRPVLVI
                     FSGKAHPHDLPGQELIRAVYRFSLRPEFEGKILVLEGYDLALARKLVTGVDIWLNTPQ
                     YPLEACGTSGMKAGVNGVINLSVLDGWWAEGYDGENGWAITPHAEAMPAENYVHLEAQ
                     ELLNILEYEAIPLYYERNRQGYSPAWIKKAKASMKSLIPRYNTERMVMDYVRRFYSPA
                     TRQQALLSAHDSLAAIELAHWKKRIAHGWPEVRLHLIAGPRARVKAGESLKFIVAVRL
                     GRLTPEDVVMECIVGSGTEPGRFAIKETHPFVPKGRNAEDETLFELEFTPSRFGLQDY
                     KLRLYPYHPLLTHRFETGLMIWV"
     gene            1500..3419
                     /gene="glgB"
                     /locus_tag="VE844_01195"
     CDS             1500..3419
                     /gene="glgB"
                     /locus_tag="VE844_01195"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006889763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003844 - 1,4-alpha-glucan branching
                     enzyme activity [Evidence IEA];
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein GlgB"
                     /protein_id="HZC00014.1"
                     /translation="MAGDAVHYEVNLLTEHDIFLFKEGTHGRLYQKLGSHLLTVDGVQ
                     GTHFAVWAPNAERVSVIGDFNRWDRHAHPLRAREDGSGIWEGFIPAVRQGALYKYRIA
                     SRYHGYRVDKGDPFAFRWELPPQTAAQVWDLDYQWGDAAWRQARHNANKLVAPCTIYE
                     VHLGSWRRVPEQGNRYLTYRELALQLAEYVKEMGFTHVELLPVMEHPFYGSWGYQTIG
                     YFAPTARYGTPQDLMFLVDHLHQQGIGVILDWVPSHFPNDEHGLAYFDGTYLFEHADP
                     KQGYHPEWKSYIFNYGRHEVCAFLLSSALFWLDHYHIDGIRVDAVASMLYLNYARQEG
                     EWIPNPHGGKENLEAISFIRQLNEAVYRDHPEAQTIAEESTSWPMVSRPTYVGGLGFG
                     MKWNMGWMHDTLNYLAQDPIHRKYSHDQLSFSLWYAFYENFVLPLSHDEVVHGKASLI
                     GKMPGDDWQKFASLRLLFGYMYGHPGKKLLFMGGEFAQWREWNHDESLHWHLLQYPMH
                     QGIQRWVRDLNQLCRLEPALHELDFAAVGFEWIDVHNAEQSVIGFIRKAKSTDTLILV
                     VANFTPVPRLNYRVGAPRGGWWQEILNSDAELYGGCGYGNLGGIEAAPVQTHGRYYSL
                     SLTLPPLGILFLKSG"
     gene            3449..5449
                     /locus_tag="VE844_01200"
     CDS             3449..5449
                     /locus_tag="VE844_01200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005004716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-1,4-glucan--maltose-1-phosphate
                     maltosyltransferase"
                     /protein_id="HZC00015.1"
                     /translation="MDTSLRSEEGRRRVVIEGVKPEIDAGRFPIKRTVGEKVVVEADI
                     FADGHDAIACVLGYRKADAGEWDEVPMQPLTNDRWRGEFQVIELGRYFYTLTAWIDHF
                     ESWRRELVKRAQPEDIAIALLVGAKLIEQATSRATKHDVKRLKSFAKALRGEGTPETR
                     RAIALDQELTELMAGHPKRRFATTYDRELEVVVDRERARFSTWYELFPRSCTDEPGRH
                     GNFQDLENRLAYIADMGFDVVYLPPIHPIGRTNRKGKNNALIAAPEDPGSPWAIGAQE
                     GGHQAIHPELGTLEDFQRLVRTIHERGMEMALDIAFQCAPDHPYVEAHPAWFRWRPDG
                     TVQFAENPPKKYQDIYPFDFETDAWRALFEELKDVILYWIEQGVRIFRVDNPHTKPFA
                     LWEWLISEIKRDHPEVIFLAEAFTRPKVMQRLAKLGFTQSYTYFAWRNTKQELTDYFT
                     ELTQTEMREYFRPNLWPNTPDILTEYLQFGGRPAFMARLVLAATLGASYGIYGPPFEL
                     LERIPREPGSEEYLNSEKYEIRHWDLEKPDSLKDFIARVNRIRKENRALQYAGGLCFH
                     PVDNDAIIGYSKCTEDLSELMLVVVNLDPYYRQAGWIDLPLEALGLDPYLPYQVHDLL
                     SDARYLWHGARNYVELDPNTAPAHIFRLRHRVHTEHDFDYFM"
     gene            5463..>6158
                     /locus_tag="VE844_01205"
     CDS             5463..>6158
                     /locus_tag="VE844_01205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013033436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HZC00016.1"
                     /translation="MSQKREETSLLEDDPLWYRDAIIYQLHVKAFYDSIQDGVGDFAG
                     LAERLDYIQDLGVNAIWLMPFYPSPLRDDGYDIADYCNIHPDYGTLKDFRNFVRQAHR
                     RGIRTITELVINHTSDQHPWFQAARRAPPGSAKRNFYVWSDTDKKFPETRIIFTDTET
                     SNWAWDPVARAYYWHRFFSHQPDLNHNNPQVVKAVIRVMQFWLDRGVNGLRLDAIPYL
                     CVREGTPNENLPET"
BASE COUNT         1331 a         1744 c         1751 g         1332 t
ORIGIN      
        1 gccagatcca tggggaggtc gcggcgcgca tggaggcgta tgtctggcct gaggttcccc
       61 cttctgaaaa cctcatggac tatattacca acggcgttca tgtccccacc ttcctggcgg
      121 ccgcctgggt caatctgttc gatctgcgct ggggggttca atggcgcaac gaattcctga
      181 acaggacgtt ctgggaacgc attgacgatc taccagactc tgccttttgg agcgtgcgcc
      241 agctcttgag attcgatctg ctgagggaga tcaaagtccg tgcaaccgca caattccgca
      301 ggaatggcta cagtccatcc ctcatcaaac gcttgacgcg gtatctcggc accgacggcg
      361 acatgctcgt ccttggtttt gcgcgacgct ttgctaccta taagcgagcg accctgttgt
      421 tcaccgatcc cgagcgtttg gcccgactat taagtgatcc aaaccggcct gtcctagtga
      481 ttttcagtgg caaagcccat ccgcatgacc tgcctggcca ggaattgatc cgggcagtat
      541 atcgcttctc attgaggccg gagtttgaag gcaagatcct ggtgcttgaa gggtacgatc
      601 tggcgcttgc gcgcaagctc gtcaccggcg tagatatttg gctaaacacg ccacaatatc
      661 cgctggaggc gtgcggtacc tcgggtatga aagcaggggt caacggggtt atcaatctga
      721 gcgtgctcga tggttggtgg gcagagggtt atgatggcga aaacggttgg gccatcacac
      781 cccacgctga agcgatgccc gcggaaaact acgtgcacct cgaggcgcag gaattgctca
      841 atattctcga gtacgaggcc atcccgctct attatgagcg caatcgtcag ggctattcgc
      901 cagcttggat aaagaaggcc aaggcctcta tgaaatccct tattccccgc tacaacaccg
      961 agcggatggt gatggactat gtcagaaggt tctatagccc tgcgacccgc cagcaggcgc
     1021 tcctctcggc gcacgattct ctcgccgcga tcgaactcgc gcactggaaa aaacgcatag
     1081 cccacggttg gcccgaggtt cgcctgcacc tgatcgcggg gccaagagcg agggtcaaag
     1141 ccggagaaag cctcaaattc atagtcgccg tccgcttagg gcggctcacg cctgaggatg
     1201 tggttatgga atgcatcgtc ggcagcggta ccgagccggg acgattcgcg atcaaggaga
     1261 cccacccctt cgtacccaaa ggccgcaatg cggaagacga gaccctcttc gagcttgaat
     1321 ttaccccttc ccggttcggc ctgcaggatt ataagctgcg cctgtatcct taccacccgc
     1381 tccttaccca tcgttttgag acaggtttga tgatatgggt ttgatcgctt atcgataaca
     1441 tggtgtaatt aaaccctgcc tggtagacca agcttagccg aattttgacg atcagatcga
     1501 tggctggaga cgctgttcac tatgaggtca atctactgac cgaacacgat atctttctgt
     1561 tcaaggaagg gacccatggc cggctttacc aaaaattggg ttcgcacctc ctgaccgtcg
     1621 atggcgtaca aggtacccat ttcgccgtct gggctcccaa tgcggaacgg gtatcggtga
     1681 taggagattt caaccgctgg gatcggcatg cccatccgct gagagcgcga gaggatggct
     1741 ctgggatatg ggagggattc atccctgcgg tccggcaggg ggcgctttat aaatatcgga
     1801 tcgcctcccg gtaccacggt tatcgcgtgg acaaaggcga tccatttgcc tttcgctggg
     1861 aactcccgcc tcagacggcc gctcaggtgt gggatctcga ttatcaatgg ggtgatgcgg
     1921 cctggaggca ggcccggcat aacgccaata agctggtagc cccgtgcacg atctatgagg
     1981 ttcatctggg ctcgtggcga cgggttccag aacagggaaa ccggtatctc acctaccggg
     2041 aactcgcctt gcagctggcc gagtatgtca aggagatggg cttcacccac gtcgagctgc
     2101 tgcctgtcat ggagcatccc ttttacggct cgtggggcta tcagaccata ggttactttg
     2161 cgccaacggc acgctatggc acacctcagg atctgatgtt tctcgtcgat catctccatc
     2221 agcaaggcat cggtgtcatc ctcgactggg taccttcgca ttttcccaat gatgagcatg
     2281 gcctcgccta ctttgatggt acctatctct tcgagcatgc cgatcccaag cagggttatc
     2341 atccggagtg gaagagctat atcttcaact atggccgcca cgaggtatgt gcctttctgc
     2401 tgagcagcgc gctattttgg ctcgatcact atcatatcga tgggatccga gtagatgccg
     2461 tggcctcgat gctgtacctc aactacgcaa gacaagaagg agagtggata ccgaacccgc
     2521 atggcgggaa ggagaacctc gaggcgatca gcttcattcg ccaactgaat gaggccgtct
     2581 accgggatca tcccgaggca cagaccatcg ccgaggaatc gacgtcctgg cccatggtat
     2641 ctcgaccgac ttacgtggga gggctcggtt tcgggatgaa gtggaatatg ggctggatgc
     2701 acgatacctt aaactatttg gcccaggacc ccattcaccg taagtactcc catgatcagc
     2761 tgagctttag cctctggtat gcgttttatg aaaacttcgt gctgcccctc tcccatgacg
     2821 aggttgtcca cggcaaggcc tcactgattg gcaagatgcc gggcgatgac tggcagaagt
     2881 tcgcgagctt gaggctcctg tttggatata tgtacggtca tcccggcaaa aagctcctgt
     2941 ttatgggcgg cgagttcgcc caatggcggg aatggaacca cgatgaaagc ttgcactggc
     3001 atctattgca ataccccatg caccagggta tccagcgctg ggtaagagat ctgaatcagc
     3061 tctgtcggct tgaacctgcg ctccatgagc tcgattttgc cgcggtagga ttcgagtgga
     3121 tcgacgtcca taatgcagag cagagcgtca tcggtttcat acggaaagcg aaaagtacgg
     3181 acaccctcat cctggtggtg gctaatttca ccccggtgcc gcggctcaat tatcgggtcg
     3241 gtgcgccacg cggcggctgg tggcaagaga tcctgaatag cgatgcggaa ctttacggcg
     3301 ggtgcggcta cgggaatcta gggggtatcg aagctgcgcc agtacagaca catggccggt
     3361 attactcttt gtccctcacc ttgcccccgc tggggatcct gttcttgaag agcggatgag
     3421 gagcgaggta cgcggggagc ggccagggat ggacacatct ttgaggagcg aggaaggcag
     3481 aaggcgggtg gtcatcgagg gtgtgaaacc cgagattgac gccggccgct ttcccatcaa
     3541 acgaacggtg ggggagaagg tggtagtgga agccgatatc ttcgcggatg ggcatgatgc
     3601 catcgcctgt gtcttagggt atcgcaaagc ggatgcgggc gagtgggacg aggttcctat
     3661 gcagcccttg actaacgacc gctggcgtgg ggaattccaa gtgatagagc tcggccgcta
     3721 tttttatacc ctgacggcct ggatcgatca tttcgagtcc tggcgtcggg agttggtgaa
     3781 acgggcccag ccggaggaca tcgctattgc gcttctggtc ggggccaaac ttatcgaaca
     3841 agcgacgagc cgcgcaacca aacacgacgt caagcggctc aaatcctttg ccaaagcctt
     3901 gcgtggtgag ggcacacctg agacccgacg ggcgatcgcc ctcgatcaag agctcaccga
     3961 gctaatggcg ggtcatccca agcggagatt cgccaccacc tatgaccgag aacttgaagt
     4021 ggtggtcgac cgcgaacgcg cccgtttcag cacctggtac gagctgtttc cgcggtcttg
     4081 cactgatgag ccaggacggc acggcaactt ccaagatctg gaaaatcggc tcgcctacat
     4141 cgccgacatg ggtttcgatg tggtctatct gcctcctatc catccgattg gacgaaccaa
     4201 tcgcaagggt aaaaacaacg ccctcatcgc cgctcccgag gatcccggaa gcccctgggc
     4261 cattggggca caagaaggcg ggcaccaggc gatacacccc gagcttggga cgcttgagga
     4321 cttccagcga ttggtccgca cgatccatga acgagggatg gaaatggccc tggatatcgc
     4381 cttccagtgc gcgccggacc atccctatgt cgaggcccac ccggcctggt tccgctggcg
     4441 tcccgatggg actgttcagt tcgccgagaa tccgcctaag aaataccagg acatctatcc
     4501 cttcgatttc gagaccgacg cttggcgggc cttgtttgag gaactcaaag atgtgatcct
     4561 gtactggatt gaacaggggg tacgtatctt tcgcgtggac aatcctcata ccaaaccttt
     4621 cgcgctctgg gagtggctca tcagcgagat caaacgggat catccggagg tgatctttct
     4681 agcggaagcg ttcacgcgtc ccaaggtcat gcaacgcctt gccaaactcg gatttaccca
     4741 atcgtatact tatttcgcct ggagaaatac caagcaggag ctcaccgact atttcactga
     4801 gcttacccag accgagatgc gggagtattt ccggcccaac ctctggccca acacccccga
     4861 catcctgacg gaatacctgc aatttggcgg ccgtcctgcg tttatggcgc ggctggtgct
     4921 ggcggccacc ttaggcgcga gctatgggat ctacgggccg cccttcgaac tcctcgagcg
     4981 gatcccgcgg gaacccggca gcgaggaata tttaaactcg gaaaagtatg agatcaggca
     5041 ttgggacctc gaaaagcccg atagcctcaa ggattttatc gcccgggtca accgtatccg
     5101 caaggaaaac cgtgctcttc aatacgctgg gggtctgtgc tttcatcccg tcgataacga
     5161 cgcgatcatc ggctatagta aatgcacaga ggatctctcc gagcttatgc tggttgtggt
     5221 caatctagat ccctactatc ggcaggcggg ttggatcgat ctcccgctcg aggcgctcgg
     5281 gctcgacccc tacctgccct accaggtcca tgatctcctg agcgacgccc gctatctatg
     5341 gcatggggcg cgcaattatg tggagctgga tcccaacacc gcgccggccc atatcttccg
     5401 gctgcggcac cgcgtccata cggaacacga tttcgattat ttcatgtaac ggggcgggga
     5461 cagtgagtca aaagcgagag gaaacctccc tcctagagga tgatcccctc tggtatcggg
     5521 acgccatcat ctatcaattg cacgtcaagg ccttctacga cagcatccaa gacggtgtgg
     5581 gcgacttcgc cggacttgcg gaaagactcg attatatcca agaccttggc gtcaatgcga
     5641 tctggttgat gccgttttat ccttctcccc tgcgtgatga cgggtatgat attgccgact
     5701 actgcaacat ccacccggac tacgggaccc tcaaggattt ccgcaacttc gtgcggcagg
     5761 cgcatcgccg ggggatccgc accatcaccg agctggtcat caaccacacc tcggaccagc
     5821 atccctggtt ccaggcagca cgccgggccc cgcctggatc cgctaagcgg aacttctatg
     5881 tttggagcga caccgataaa aagttcccgg agacccgcat catcttcacc gacaccgaaa
     5941 cctccaattg ggcctgggat ccggtggcac gggcttatta ttggcatcgc tttttctctc
     6001 accagcccga cctcaatcat aacaaccccc aggtggtgaa ggccgtgatc cgggtgatgc
     6061 agttctggct cgataggggt gtaaatggcc tgcgtttaga cgccatcccc tatctatgtg
     6121 tacgcgaggg cacccctaac gagaatctgc cggagacc
//
LOCUS       DASQSL010000116         1384 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_69545, whole genome shotgun sequence.
ACCESSION   DASQSL010000116 DASQSL010000000
VERSION     DASQSL010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1384
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69545"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(400..1206)
                     /locus_tag="VE844_01210"
     CDS             complement(400..1206)
                     /locus_tag="VE844_01210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00017.1"
                     /translation="MLVGVILWVLYALLLSWRGGQEQKQVAEPPASQSTASEVTTSGI
                     VAYEFVGFVEGTNTLIAVVADKTVTASPEKTSLENTTETVAQSTGETTAARGGERKVQ
                     AYVCDGLPQGTAEWFEGQAATNTLELTSVSGNARLQVVLTEEEATGTIALADGTLRRF
                     AASAAHEGAGLYEVIVASDGRRSGTSANGAKDEAQVSSDGVWTTGTIRLPSGEAVDYR
                     RRQIARYQGAAKPGTYTTIVLPSAERERGRAGEVKTGEPSSNFISSDLYL"
BASE COUNT          251 a          449 c          376 g          308 t
ORIGIN      
        1 cgtccagagc ggaggcactg gttgcaggct acaggttcgc gttcttgctc gccgcgggtg
       61 tggcatcgct cggcgtggtg gccgcgcttt gcctccttca acaagccaga acatttcgca
      121 aacggtagtc gtgcccttga ccatgtcgag caccagccgc agacgctacc ctaccgacat
      181 taccgactcc gaatggggtc acctggctcc gctgcttcca cccgccaagc aaagagcccg
      241 cccctcttcg tcttgccctc agaggcgcac taagacgctg tgtccacgag gacggcgaag
      301 gtgatggcga agccgcggtg gccggtgcct ctatgggtgc tctcaccatc acaaagagtt
      361 ctcgggaaac caagacctag agcatacaag cgtcaaggac tagaggtaga ggtcgctaga
      421 tatgaagttg ctcgatggct caccagtttt gacctcccct gcgcgccccc tctctcgctc
      481 ggcactaggt agaacgatcg tcgtataggt gccgggcttg gcggctcctt ggtatctggc
      541 aatctgtctt ctcctgtagt caacagcctc tccgcttgga agtctgatcg tacccgtagt
      601 ccacactcca tcagagctga cctgggcttc gtccttcgcg ccgtttgcag acgtgccgct
      661 tcgtcggccg tcggaggcta cgataacctc gtagagacca gccccctcgt gagcagcaga
      721 cgccgcaaag cggcgcaggg tgccgtcggc cagtgcgatc gtgccggtcg cctcctcttc
      781 ggttagcacc acctgtagcc gtgcattccc gctcacagag gtcagctcca gcgtgttggt
      841 cgccgcctgt ccctcgaacc actcggcggt gccctgcggc aggccgtcac agacataggc
      901 ctgcaccttg cgctcaccac ccctggctgc ggttgtctca cccgtgctct gggcaaccgt
      961 ctcagttgta ttttcgaggc ttgtcttctc tgggcttgcg gtaacagtct tgtccgcaac
     1021 tacggcaatc aacgtgttgg tcccttcgac aaagcctaca aactcgtagg cgacaatgcc
     1081 gctggtggtg acttcgctag cggttgattg gctggctggc ggttcagcta cctgcttctg
     1141 ttcttggcca ccacgccagc tcagcagtaa cgcgtataag acccacaaga ttacgccaac
     1201 caacacaacg gtgaatatcg tcctggagag catctttatc gtgccttctg gcctataccg
     1261 agagttctag gcatatatga gccgccccgg cttcttttgc ttgcacccac ttcacgttta
     1321 tccacgcccc tccacatttt gtcggtcccg ggatcgaagg ggaccagatc caggatatca
     1381 ccgg
//
LOCUS       DASQSL010000117         1599 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_124560, whole genome shotgun sequence.
ACCESSION   DASQSL010000117 DASQSL010000000
VERSION     DASQSL010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124560"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            324..1175
                     /locus_tag="VE844_01215"
     CDS             324..1175
                     /locus_tag="VE844_01215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015258445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HZC00018.1"
                     /translation="MTPLRQKMIDAMQVRGFSVRTHRSYLSAVADLARYYLRSPDQVS
                     GEELQAFFVYLAKERGLSGASCRLYLNAIRFFYLHVLRRDSFSVTLVVPKRAQRIPEL
                     LTRAEVGRILSACANFKHRILLITCYGCGLRVSEAVALKVRHIDGERRLLRVEQGKGA
                     KDRNVILSEALLHLLRGYWRAVRPPQWLFPGRDFSTPLGITRVQKAFTAAKRRAGIDK
                     VGDIHALRHAYATHQLQAGMPVHQLQRLLGHQDIHSTLRYVHWVPNYREGKACTDLVA
                     GLEVGHD"
     gene            1168..>1599
                     /locus_tag="VE844_01220"
     CDS             1168..>1599
                     /locus_tag="VE844_01220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020564300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase zinc-binding domain-containing
                     protein"
                     /protein_id="HZC00019.1"
                     /translation="MTEASGLQAVFDRFLDDFKQHHPLSPDQERACRHIEQCRTEALG
                     GLQQQCEHCGYEAPQFYSCRDCHCPKCQGRAQQAWCEQQQQALLPVTYYHLVFTLPHE
                     LNEWVELHPEVIYPLLFQSVWTTLEAFGRDPKRLNGTLGMTC"
BASE COUNT          336 a          455 c          444 g          364 t
ORIGIN      
        1 atgaaatact atccctgtca caactatgcc attgaatttg ttgtgaatcg aaggaaatta
       61 tagatcgatt ctacaattgt gcaaatcatg gtctataatt taagcttaaa tgcgcgataa
      121 gttattggtt aataagaggc aggcgcgtaa ttatatagaa actttccgtg ttttatcaga
      181 gaaagtttct atctactcat atgttgaact aaaccgcttc gcggcagctt ctcactctca
      241 cccgcctgag cttttccctc aagtaacggt ttgtcagata ctcctctatt gaccgctttt
      301 ggtcatgata gaggagaaac cccatgacac cgttacgaca aaaaatgatc gacgccatgc
      361 aggtgcgtgg cttttcggtc cgtacccacc gcagttatct gagcgccgtc gccgatttgg
      421 cgcggtacta tctgcgctcg ccggatcaag tgtccggtga ggagttgcag gcgttctttg
      481 tttatctggc caaggaacgg gggctgtccg gagcctcctg ccggctctat ttgaacgcga
      541 tccggttttt ctatctccat gtcttgagac gcgattcatt cagcgtcacc ctggtggtgc
      601 ccaagcgtgc gcaacgcatt ccggagttat tgacgcgcgc ggaagtaggc cggattctat
      661 cggcctgcgc caacttcaaa caccggatat tgctgatcac ctgctatggc tgcggattga
      721 gggtcagcga ggcggtcgcg ctcaaggtgc gccacatcga cggtgaacgc cgattgctgc
      781 gggtggagca gggcaaaggg gccaaggacc ggaatgtgat cctatcggaa gccttgctcc
      841 atttgctgcg cggttactgg cgggcagtgc ggccgcccca gtggctgttt cccgggcgcg
      901 acttttctac cccgctcggc atcacccgtg tacagaaggc gtttactgcg gccaagcgcc
      961 gcgctgggat cgacaaggtc ggcgacatcc atgccctgcg ccacgcctat gccacccatc
     1021 aactgcaagc cgggatgccg gtgcatcagc tgcagcggct gctcggccac caggacatcc
     1081 attcgaccct gcggtatgtg cactgggtgc cgaactaccg ggaagggaaa gcctgtaccg
     1141 atttggtcgc tgggctggag gtgggccatg actgaagcca gcggattgca ggcggtgttc
     1201 gatcgctttc tggacgattt caagcaacac cacccactca gtccagatca ggagcgagcc
     1261 tgccgccata tcgaacagtg ccgcactgaa gccctgggcg ggctgcagca gcaatgtgag
     1321 cactgcggtt acgaggcacc tcaattctat tcctgccgcg actgccattg tcccaaatgc
     1381 cagggccgcg cccaacaggc gtggtgcgaa caacagcagc aagcgctctt gccggtgacg
     1441 tattatcacc tggtattcac cctgccccat gagctcaacg agtgggtaga gttgcatccc
     1501 gaggtcatct acccgttgct gttccaaagc gtctggacta ccctcgaggc cttcggtcga
     1561 gacccaaagc gcctgaacgg cacgctcggc atgacctgc
//
LOCUS       DASQSL010000118         1171 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_55845, whole genome shotgun sequence.
ACCESSION   DASQSL010000118 DASQSL010000000
VERSION     DASQSL010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1171
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55845"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..645)
                     /locus_tag="VE844_01225"
     CDS             complement(<1..645)
                     /locus_tag="VE844_01225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00020.1"
                     /translation="MGVLTRCGLPLPVYFLADEKHSYCLTDKVYLPTIVTSCVIWHLG
                     YTTEASAAAFTQAYGAFQRAASQQEPSYRVRGVLTDGFDSTTKSMRTLFPGAHLGSCL
                     RHALTKLPKKLAAIVSPVRRALHSQFHTLLYHVRQRKSLRVFALGQRLRHFADHVAYT
                     AGEANGNRVRQWFQDKKAGWYAVLEDPQMPVTSTLLDQAHNAIERKLFAMKGFHH"
     gene            707..1138
                     /locus_tag="VE844_01230"
     CDS             707..1138
                     /locus_tag="VE844_01230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00021.1"
                     /translation="MTAAQLQTEASVGGQQRITSHLWVHLAVTQDEVRQDREHRLACG
                     ALDTPDSETTQPKPEVMRMTRQAPSAATAHLMFELKAQGQEESHDAFDKRLAVAKELN
                     VGGFVVKIDRDGSVFAGLASSVSHGSPSGQMVVATDDPRWG"
BASE COUNT          259 a          330 c          367 g          215 t
ORIGIN      
        1 atgatggaac cctttcatcg cgaacaactt gcgctcgata gcattgtggg cctgatcgag
       61 cagggtgctg gtgaccggca tctgcgggtc ttcgagcacc gcataccagc ccgctttctt
      121 gtcctgaaac cactggcgca cacggttgcc gttggcctcc cctgcggtgt aggcgacatg
      181 atcggcaaag tggcgtaacc gctggcccag ggcaaacacc cgcaagctct tccgctgtcg
      241 cacgtggtac aacagggtat gaaactgtga gtgcaaagcc ctgcgcaccg gggacacgat
      301 cgccgcaagt ttcttcggga gcttggtgag cgcgtggcgt aagcaggagc caaggtgcgc
      361 tcccggaaac agggtccgca tactcttggt ggtgctgtca aagccatcgg tgagcacccc
      421 tcggacccga taggatggtt cctgctggga ggctgcgcgt tgaaacgccc cataggcttg
      481 ggtaaaggct gccgcactgg cctccgtcgt atagcccaag tgccagatga cacagctggt
      541 gacaatcgtg ggcaagtaca ctttgtctgt cagacagtaa ctgtgcttct cgtcggcgag
      601 gaaatagacg ggcaggggta agccacaccg ggtcagcacg cccaccaagc tctgctgacc
      661 cagcgcacaa atcatccgat agagggccat cggggagaga tggccaatga ccgccgcaca
      721 gctccaaact gaggcctccg tgggtggcca acagcgcatt acgagccacc tctgggtgca
      781 tctggcggta acgcaagacg aagtgcggca ggaccgtgaa caccgcttgg catgtggtgc
      841 actggacacg ccagatagtg agaccaccca gccgaagccg gaggtaatgc gaatgacgcg
      901 tcaggcaccc tccgccgcga cagctcacct tatgtttgag ttgaaagccc agggccagga
      961 ggaaagccat gacgcattcg acaaacgcct tgccgtcgcc aaggagctga acgtaggtgg
     1021 cttcgttgtg aaaatcgacc gtgatggttc ggttttcgcg ggtctggcga gcagtgtttc
     1081 gcatgggtca ccctcaggtc agatggtcgt ggcaactgat gacccaagat gggggtaaga
     1141 ctgaacaatt gcaaggagat cacgaagggc g
//
LOCUS       DASQSL010000119         1190 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_165359, whole genome shotgun sequence.
ACCESSION   DASQSL010000119 DASQSL010000000
VERSION     DASQSL010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165359"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..714)
                     /locus_tag="VE844_01235"
     CDS             complement(139..714)
                     /locus_tag="VE844_01235"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC00022.1"
                     /translation="MRAAWRVMVAEQVETERLVFVDEMGTNTSLSAAYAWAPKGQRAY
                     WSVPRNRGANTTVLSSMSAEGMGPSLTVEGPTTSVVFETYVEHVLAPTLRRGQVVVMD
                     NLSAHKGERIKELIERRGCQLVYLPSYSPDLNPIEEAFSKIKRLMRKAEARTREALVE
                     AIGSALSAVTSRDARGFFEHCGYRMPVQSLW"
     gene            complement(711..1088)
                     /locus_tag="VE844_01240"
     CDS             complement(711..1088)
                     /locus_tag="VE844_01240"
                     /inference="COORDINATES: protein motif:HMM:NF013842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 transposase-related protein"
                     /protein_id="HZC00023.1"
                     /translation="MRAYSEDLRKKIVAASERGMSKAQVARLFDVSLSSVKRYSRMAR
                     LGESLKPRKSTGRPRKADEKAQVLLEQDVEERPGATIGQRRRFLEHITATTLSDSTVR
                     RQMKRLGFTQKNGQWGRWNETSS"
BASE COUNT          240 a          354 c          317 g          279 t
ORIGIN      
        1 cgatcagact tttatccttg tatgaatctc cgaggcgctt gattcggact ggagtacacc
       61 aactactacg cgagtacacc cttccttcgg gggccttgcg aagccgatgt taataagcac
      121 aacgaaagac tacagcgttc accataatga ttggaccggc atccggtagc cgcagtgctc
      181 aaagaaacca cgagcatctc tggaagtgac cgccgagagt gccgacccga tcgcctccac
      241 taaggcttct cgagtcctag cttcggcctt acgcataagc ctcttgatct tcgagaacgc
      301 ttcctcgatg ggattgaggt ctggagagta ggatggcagg tagacgagct ggcaaccccg
      361 ccgctcgatc aactctttga ttctctctcc tttgtgggct gagaggttgt ccatcactac
      421 cacctgaccc ctacgcagcg tgggggccag gacgtgctcc acataagtct caaagactac
      481 agaagtggtc gggccctcca cagtgaggga aggtcccatc ccttctgcgc tcatgctcga
      541 aagcacggta gtgttagctc cccggttgcg aggcacggac cagtaggccc tctggccttt
      601 tggtgcccaa gcgtacgcag cagacaacga ggtgtttgtt cccatctcgt caacaaagac
      661 caaccgctcg gtctcgactt gctcagcgac catcactctc caggccgctc tcaagaactc
      721 gtctcgttcc agcgccccca ctgtccgttt ttttgagtga agccaagcct cttcatttgc
      781 cgccttacgg tggagtcgct aagggtcgtg gccgttatgt gctccaaaaa gcggcgtctt
      841 tggccgatgg tggcgcctgg gcgctcctct acgtcctgtt cgagaaggac ttgggctttc
      901 tcgtccgcct tgcggggccg tccggtgctc tttctgggct taagcgactc tcctagtcta
      961 gccatcctcg agtagcgctt gaccgaggag aggcttacat cgaacaggcg agctacttga
     1021 gctttggaca taccccgctc cgaggcggcg actatcttct tgcggaggtc ttcggagtag
     1081 gctctcatct ttctatgatc gcatacgggt caaactttat gctcatcact gtaggtaagt
     1141 acaacccgca gttccagcag taccttagag acgcggcggt cggcaaagcg
//
LOCUS       DASQSL010000120         1063 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_179435, whole genome shotgun sequence.
ACCESSION   DASQSL010000120 DASQSL010000000
VERSION     DASQSL010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179435"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..123
                     /locus_tag="VE844_01245"
     CDS             <1..123
                     /locus_tag="VE844_01245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007145159.1"
                     /note="Maf; overexpression in Bacillus subtilis inhibits
                     septation in the dividing cell; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HZC00024.1"
                     /translation="ALFSKLEGEDLTSLVGLPLIRLISMLQEERIDVLLLGAGG"
     gene            complement(161..>1063)
                     /locus_tag="VE844_01250"
     CDS             complement(161..>1063)
                     /locus_tag="VE844_01250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006746086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative PEP-binding protein"
                     /protein_id="HZC00025.1"
                     /translation="PVVNASGMDGVGLYRTEFPFMMRSTFPLEEEQYGVYRKMLESFA
                     PKPVVMRTLDVGGDKPLPYYPMIEENPFLGWRGIRFTLHHPEIFLTQLRAMLRANAGL
                     NNLQLIFPMISQVEEIKEAKELLARAFNELRAEGQDAVLPPVGAMVEVPSAVYKIETL
                     ARYVDFFSIGTNDLTQYLLAVDRNNPQVASLYDALDPAVLRALCMVVRRARRFDKPVS
                     VCGEMAGDPAAAILLLGMGVDALSVNASNVPRIKWVIRTIPQSYAKHVLRQALQLENA
                     KAIRQMLNRELEQTGLGELIRAGK"
BASE COUNT          217 a          319 c          300 g          227 t
ORIGIN      
        1 gctctcttca gtaagcttga aggtgaagac ctgacctccc ttgtgggatt accccttatc
       61 cgactcatca gtatgctcca ggaagagagg attgatgtgc ttttgctagg cgcaggaggt
      121 taaggcgtgc cgtcactcac caattttggc aggcattacc tcacttcccc gcccggatca
      181 gttcacctaa accggtctgt tcgagttcgc ggttcagcat ctggcgaatg gccttggcat
      241 tttcgagttg aagtgcttgt ctcaggacat gctttgcgta gctttggggg atagtccgga
      301 tcacccattt gatacgcggc acgttcgacg cgttcacgct gagcgcatcg acacccattc
      361 ccaagaggag gatcgccgcg gccgggtcgc ccgccatctc gccgcagacg ctcaccggct
      421 tatcaaaccg ccgcgcccgc ctgaccacca tgcacagcgc ccgcagcacg gctggatcca
      481 gcgcatcgta gaggcttgcg acctggggat tgttccggtc cacggccaag aggtattggg
      541 tgaggtcatt ggtgccgatg gagaagaaat cgacgtatcg ggccagggtt tcgatcttat
      601 agaccgcaga cggcacttcg accatcgcgc ccacaggcgg caggaccgcg tcctggcctt
      661 ctgcccgaag ctcgttaaaa gcccgcgcga gcagttcttt cgcctcctta atctcctcga
      721 cttgactaat catgggaaag atgagctgca gattgtttaa gcccgcattg gcccgcagca
      781 tggcgcgcag ctgggtcaag aagatctccg gatgatggag cgtgaagcgg atcccgcgcc
      841 aaccgagaaa cgggttctcc tcaatcatcg ggtagtaagg caagggctta tcgcccccta
      901 catccagggt gcgcataacc acgggtttgg gcgcgaaaga ctcgagcatc ttccgataca
      961 ccccatactg ttcctcttct aagggaaagg tgctgcgcat catgaacggg aactcggtgc
     1021 ggtagagccc caccccatcc atgccgcttg cgttcaccac ggg
//
LOCUS       DASQSL010000121         1184 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_42077, whole genome shotgun sequence.
ACCESSION   DASQSL010000121 DASQSL010000000
VERSION     DASQSL010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1184
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42077"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..511)
                     /locus_tag="VE844_01255"
     CDS             complement(<1..511)
                     /locus_tag="VE844_01255"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HZC00026.1"
                     /translation="MALCVIVVLEHMEWEAPPGSYQVPNLAGGSAPRAFPDYARLSHR
                     EYGHRVGIFRALDVLDKYSIKATVAMDALTAENYPYLVRHCLDRGCEVIGHGISVSRM
                     ITSNMSLEEEDEYIRASIESLIRATGTAPQGWLGPEYGESTRTPQLLARAGLRYVCDW
                     ANDEQPYPMK"
     gene            complement(713..>1184)
                     /locus_tag="VE844_01260"
     CDS             complement(713..>1184)
                     /locus_tag="VE844_01260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="polysaccharide deacetylase"
                     /protein_id="HZC00027.1"
                     /translation="TGKQLKGMLGPAISGSVSTPDLMAKAGLIYHTDWMHDDQPVPIK
                     VKSGKLISVPYSIELNDSSVLRDLHYEADYFARICKAQFDQLYKEGAESGRVMCIALH
                     PFLIGQPHRVKYLDDILSYIMSHDGVWQTTADEIADYYIANYYDQAVAHAQNLG"
BASE COUNT          249 a          338 c          336 g          261 t
ORIGIN      
        1 ttttcatggg gtagggctgt tcgtcgttag cccaatcgca aacatagcgc aggcccgccc
       61 gggccagcaa ctggggcgtt cgagtcgact cgccatactc cggacccagc cagccctggg
      121 gggccgtacc ggtcgcccgg atcaacgact ctatagatgc cctgatgtac tcgtcctcct
      181 cttccagaga catattgctg gtgatcatgc gactcacgga aatgccgtga ccaatcacct
      241 cacagccccg gtccaggcag tggcgcacca ggtaggggta gttctctgct gtgagagcgt
      301 ccatagccac agtggctttg atactgtatt tatccagtac atccagggcc ctaaaaatgc
      361 ctactcggtg cccgtactcc ctatgggaca gtcgggcgta gtcgggaaaa gcccgcggtg
      421 ctgagcctcc agccagattg ggcacctggt agctgccagg tggggcttcc cactccatat
      481 gctctaggac gacgatgaca caaagagcca accgcgcgtc ctgaggccac cggaggactc
      541 ccctggtgct cagaggagac cactcatagt gtgggtggtc catgccaaat ctaccttcag
      601 caggcatgat cgagacaacg ctcctttccg gcacccttaa tagggaactt ctggatttcc
      661 tgacgccatc cctggataag gccctgggtt acatcaaagg gctaagccgc catcagccga
      721 gattctgggc gtgggccacc gcttggtcgt aataattggc aatatagtaa tcagctatct
      781 catcggcagt ggtctgccac accccgtcgt gggacatgat gtagctgaga atgtcgtcca
      841 ggtatttcac ccggtggggc tggccaataa gaaaggggtg cagggcaatg cacattactc
      901 tcccgctctc ggccccctct ttgtaaagtt ggtcaaactg ggccttacaa atgcgggcga
      961 aatagtcggc ttcatagtgg aggtcacgta acaccgagga atcgttcagc tcaatggagt
     1021 agggcaccga gattagcttt cctgacttga ctttgatggg taccggctgg tcatcatgca
     1081 tccaatcggt gtggtagatt agcccggctt ttgccatcag gtcgggggtg ctgacgctgc
     1141 cggaaatggc tgggcccagc atccctttaa gctgcttgcc ggta
//
LOCUS       DASQSL010000122         1892 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_110415, whole genome shotgun sequence.
ACCESSION   DASQSL010000122 DASQSL010000000
VERSION     DASQSL010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1892
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110415"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..723)
                     /gene="lipB"
                     /locus_tag="VE844_01265"
     CDS             complement(106..723)
                     /gene="lipB"
                     /locus_tag="VE844_01265"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008953895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HZC00028.1"
                     /translation="MDVIVRQLGLIDYAMTWEAMRRFTDTRTGVTEDELWCLEHPPVF
                     TLGLGGKPEHVLDPGTIPVIRVDRGGQITYHGPGQLLVYVLVDLRRLGWGIRKLIHLL
                     EQSVIDALHAFGVVAVRCSGAPGVYIGESKVAALGLRVKRDCTYHGLALNVDMDLSPF
                     GRINPCGYPGLTVTQTRNHGILGGVEILAQALLPYLIEYLGYSKQ"
     gene            complement(756..1403)
                     /locus_tag="VE844_01270"
     CDS             complement(756..1403)
                     /locus_tag="VE844_01270"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR02281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02281 family clan AA aspartic protease"
                     /protein_id="HZC00029.1"
                     /translation="MDPLKPLILLALIASVPCAIALEKIVVLGLFKDKAIVEIDGRKR
                     SLTAGATSPEGVRLIAANSSEALIEVNGKRGTYTLGTHIGSAYASVSPQATVQIWPDA
                     TGMYTVEGSINQFPIKFLVDTGASTVAMNKHQAKRLGLDYKFNSVEGAATTASGIART
                     YYLTLKRVKVGEIELNEVPAVVVDGDFPLVSLLGMSFLKRVGMMRNGRVLELHKK"
     gene            1528..>1892
                     /locus_tag="VE844_01275"
     CDS             1528..>1892
                     /locus_tag="VE844_01275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002808825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HZC00030.1"
                     /translation="MIIILHPDANKNDTEYLKLLDYLGRLPNITCRTHEEIGAQQILT
                     EIYLIGDTSSIDAQEVGAFEIVERVVRVSREYRILGRHKDDTRPSHFEYNGVRFGQDN
                     LHVFAGLCAVDTPEHVESIV"
BASE COUNT          444 a          534 c          483 g          431 t
ORIGIN      
        1 gcaagggacc tgcgcttggc actaccttga tcggtatgcg tgcgacctta tcccggcccc
       61 gctgagcggg cgtcggcctg ctttcttcac ctgtctcatg cccattcatt gtttgctgta
      121 gcctaaatac tcgatcagat aggggaggag agcctgcgct aggatctcca ccccccccaa
      181 aataccgtgg tttctcgttt gggtaacggt cagtccagga taaccacagg gattgatgcg
      241 gccaaagggg cttaaatcca tatccacatt gagagccagt ccgtgatagg tacaatctcg
      301 ctttacccgt aagcccaatg ccgcgacctt gctctcgcct atatagaccc ccggtgcgcc
      361 cgaacatctt acggcgacaa ccccaaaggc gtggagcgca tcgataaccg attgctcgag
      421 gagatggatc agcttcctta taccccaacc caggcgccgc agatcgacca gcacataaac
      481 caggagctgg ccgggaccat gataggttat ctggccaccc cggtccactc ggatcaccgg
      541 gatcgtgcct ggatcgagga catgttcagg cttgccgccc aggcccaagg taaataccgg
      601 ggggtgttcc aagcaccaaa gctcatcctc ggtcacgccg gtacgtgtat cggtgaatcg
      661 gcgcatggcc tcccaggtca tagcgtaatc aatcagaccg agctgacgaa cgataacatc
      721 cattgctgcc gggcttgcgc cttcagaggg gtcaatcact ttttatgcag ctccaacaca
      781 cgcccattgc gcatcatacc aacgcgtttc aggaatgaca tccctagcaa ggataccaaa
      841 gggaagtcac catcgacgac cacggcgggt acctcattaa gctcgatctc tcccaccttt
      901 actctcttta aagtgagata ataagtcctg gcgatgccag aggctgtagt ggctgctccc
      961 tcaacactat taaatttata gtccaacccc aggcgtttgg cctgatgttt gttcatggcc
     1021 acggtgctcg cgcccgtatc caccagaaat tttatcggaa actgattgat gctcccctcg
     1081 acagtataca tacccgtcgc gtcgggccag atctggacgg tggcttgagg ggaaaccgag
     1141 gcataggcac tgccaatatg ggtaccgagc gtataggtcc cacgctttcc attcacctcg
     1201 atgagtgcct cactgctatt ggcagcgata agtctcaccc cttcggggct ggttgcacct
     1261 gctgttaagc ttcgttttct gccgtcgatt tcaacaatgg ccttgtcttt gaagagacct
     1321 aacactacga tcttctcgag agcgatcgcg cacggtacgc tggcgatcaa ggcaagcaaa
     1381 atcagtggtt ttaagggatc catcacagca ataggggatt aggaatatat gatctgtctg
     1441 gctattaaga gttcggcgct ggatttatgt tctttagccc aaacaacatc cgctaatcca
     1501 ataggaaaat tgattaaagg gtaagccatg atcatcatcc ttcatcctga tgcgaataaa
     1561 aacgataccg agtacctcaa gcttctcgac tacctggggc gcttgcctaa catcacctgc
     1621 cgtacccatg aagagattgg ggcacagcag atcctgacgg agatctatct gatcggtgat
     1681 acctcctcga tagatgccca agaggttgga gcctttgaga tcgttgagcg ggtagtgcgc
     1741 gtctcgcggg agtaccggat ccttggcagg cacaaagacg atacccggcc gagccatttc
     1801 gagtacaacg gggtgcggtt cggtcaggat aatctgcacg tattcgcggg cctctgcgct
     1861 gtagatacac ccgagcacgt tgagagcatc gt
//
LOCUS       DASQSL010000123         1235 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_1079, whole genome shotgun sequence.
ACCESSION   DASQSL010000123 DASQSL010000000
VERSION     DASQSL010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1079"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..345)
                     /locus_tag="VE844_01280"
     CDS             complement(<1..345)
                     /locus_tag="VE844_01280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00031.1"
                     /translation="MDRGKRVAVIGALWVAADAEPAAGPVELETVTVTATKTEHPAFE
                     VAGSVSMVAAETIEAEQPQSLNDILKALPNIELFSGPRRPGGRPIYAASPMSASPPPS
                     TAPARTSPSTTRA"
     gene            complement(516..686)
                     /locus_tag="VE844_01285"
     CDS             complement(516..686)
                     /locus_tag="VE844_01285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemin uptake protein HemP"
                     /protein_id="HZC00032.1"
                     /translation="MGTKRGIHPSRRTDPGPRRRLNSQELLGGEEEVIIEHAGQEYRL
                     RKTRQDKLILTK"
     gene            complement(878..>1235)
                     /locus_tag="VE844_01290"
     CDS             complement(878..>1235)
                     /locus_tag="VE844_01290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020485763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="poly(3-hydroxybutyrate) depolymerase"
                     /protein_id="HZC00033.1"
                     /translation="IAIMDRTKDIPAAIAPSAAGFTKVDLAEFKCRTPLPVMIIHSAK
                     DTLFPGFGVEAAAWWAACNQCERTPGMRMDNGCVTYPNCAGGVTTQYCEGTEPHARWP
                     ALNQSIIDFFTAAGHP"
BASE COUNT          230 a          374 c          359 g          272 t
ORIGIN      
        1 ggccctggtg gtcgatggag aagttctggc gggcgccgtc gagggtggcg gcgatgcgct
       61 catcggagaa gccgcgtata ttggcctccc cccggggcgg cgcggtcctg aaaacagttc
      121 gatgttggga agtgccttta ggatgtcatt gaggctctgc ggttgctcgg cctcgatggt
      181 ctcggccgcc accatgctca ccgagcccgc cacctcgaag gcggggtgct cggtcttggt
      241 cgcagtgacc gtgacggtct cgagctcaac gggacccgct gcaggctcgg cgtccgcggc
      301 gacccataag gccccgatca ctgccaccct cttgcctcga tccataacca gccccccgaa
      361 aaggattaat gcggacggtg atccgcccgc tgctcgctgg ctgccttgca ggccgggtgg
      421 cctcaggtgg ctggctatcg tttgcgattt aagaggcccg aaaccgacga ggcaggtgct
      481 cctatcgaga ctcgcctcag ctttgcggga ctcatctact tcgtcaagat cagcttatcc
      541 tggcgggtct tacgcaggcg gtattcctgc ccggcatgct cgataatgac ttcctcttcc
      601 cctccgagca gctcttggct attcagacgc cgccgtggac cgggatcggt tcgccgagaa
      661 ggatgaatgc ctcgtttcgt tcccatccgg acatcgctga gtgatgataa tgataattat
      721 actcaaataa gaatcgttgt caaatggcaa gcccattatt cagtaaccat gcccgctggc
      781 gacgatagca cgttttgctt ggccacccct ggggtaatcg ccagccggat cagacccgcg
      841 aggctatgtg ttctgagctt tctccaacgg cgtccggtca agggtgaccc gcagcggtga
      901 agaagtcgat gatcgattgg tttaaggctg gccacctcgc atggggttcc gtcccctcgc
      961 agtactgggt ggtcacaccc cctgcacaat tcggataggt gacacaacca ttgtccattc
     1021 gcatcccggg agttcgctca cactgattgc acgctgccca ccatgccgcc gcttccacgc
     1081 caaaacctgg aaacagcgta tccttggcac tgtgtatgat catcactggg agtggcgtac
     1141 gacacttgaa ttctgcgaga tctaccttgg tgaagcccgc ggcactcgga gcgatcgccg
     1201 cggggatatc cttagttcga tccataattg cgata
//
LOCUS       DASQSL010000124         1364 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_124620, whole genome shotgun sequence.
ACCESSION   DASQSL010000124 DASQSL010000000
VERSION     DASQSL010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1364
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124620"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            442..>1364
                     /locus_tag="VE844_01295"
     rRNA            442..>1364
                     /locus_tag="VE844_01295"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          282 a          315 c          498 g          269 t
ORIGIN      
        1 gtgtgaatct ggcgggacca cccgctaagc ctgaatactc cctggtgacc gatagcggac
       61 gagtaccgtg agggaaaggt gaaaagtacc ccgggagggg agtgaaacag tacctgaaac
      121 cgtgtgccta caagccgtga gagccttatc cacttcggtg gtgcgtggaa cggggtccgg
      181 gtgcggtggt tcggttcgta ggcacgctgt tgggtcctga gagagcgggc aaccgtttca
      241 tctcatgtca gggccttcct gtttctcgta ccaccggctg ccttgcgggg cagccgggtt
      301 cggcggggtc ggatgggggg tgtctggttg gacgttgaga actgcacagt ggacgcgagc
      361 atcttctgac tctgttttgc agggtttgta ggcccgcacg atcgtctcct tccggaggtg
      421 gttgtgtggg gttttttgtg tggtcaagtt gttaagggca cacggtggat gcctgggcac
      481 caggagccga tgaaggacgt aggaggctgc gataagcctc ggggagctgt caaccgagcg
      541 ttgatccgag gatttccgaa tgggggaacc ccgcaccagt catgtggtgt gacccgcgcc
      601 tgaacacata gggcgtgtgg agggaacgtg gggaagtgaa acatctcagt acccacagga
      661 agagaaaaca accgtgattc cgtgagtagt ggcgagcgaa agcggaggag gctaaaccga
      721 tcgcatgtga tagccggcag gcgttgtgtg gtcggggtcg tgggacggct cgtgccggtc
      781 tgccggccgg cggggaagtg agaaagtgcg gtgttaggag aaggcctctg gaaggggtcg
      841 ccggagaggg tgagagcccc gtacccgaaa acatggtctc tccttgtgac gtgttcccaa
      901 gtagcaccga gcccgtggaa ttcggtgtga atctggcggg accacccgct aagcctgaat
      961 actccctggt gaccgatagc ggacaagtac cgtgagggaa aggtgaaaag taccccggga
     1021 ggggagtgaa atagtacctg aaaccgtgtg cctacaagcc gtgagagcct ggtgtcgcct
     1081 tgtgcggcgc gggtgattgc gtgccttttg aagaatgagc ctgcgagtta gtggtacgtg
     1141 gcgaggttaa cccgtggggg gtagccgtag cgaaagcgag tccgaacagg gcgtgtgtct
     1201 cttcggagat cgagtcgcgt gctctagacc cgaagccgag tgatctaccc atggccaggt
     1261 tgaagcgcgg gtaagaccgc gtggaggacc gaacccacca gggttgaaaa cctgggggat
     1321 gagctgtggg taggggtgaa aggccaatca aactcggtga tagc
//
LOCUS       DASQSL010000125         1164 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_124624, whole genome shotgun sequence.
ACCESSION   DASQSL010000125 DASQSL010000000
VERSION     DASQSL010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1164
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124624"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..242
                     /locus_tag="VE844_01300"
     CDS             <1..242
                     /locus_tag="VE844_01300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00034.1"
                     /translation="EIPGREGRAGRNFGPDAAPRRNRKQASRYQKAERAPKRPMRERS
                     KGQFFSGDVEDSDDDDFDSDVFSRGADDTDRDDNA"
     gene            279..494
                     /locus_tag="VE844_01305"
     CDS             279..494
                     /locus_tag="VE844_01305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014400217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00035.1"
                     /translation="MAHRSRPTSQKRNKEKARQQKQKDKEARRLETKARKTNAGPQTG
                     EKDLGLAGIKPGPQPLPEQWDYVSGHD"
     gene            805..>1164
                     /locus_tag="VE844_01310"
     CDS             805..>1164
                     /locus_tag="VE844_01310"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HZC00036.1"
                     /translation="MNCLSRHLVYGSRGMICSNSPLAASAGLKVLQEGGNAFDAALTV
                     AATESVTIVPACGLGGDAFILLYDAATGKITNINSSGVAATGATSAYYRDQGCQTMSL
                     AGPHAVSVPGAVAAWEVV"
BASE COUNT          273 a          348 c          331 g          212 t
ORIGIN      
        1 ctgaaatacc gggacgcgaa ggtcgtgcgg gtcgcaattt cggtccagac gcagcccctc
       61 ggcggaaccg caagcaggcg agtcgctatc aaaaagccga gcgtgccccc aagcgaccga
      121 tgcgtgaacg atccaaagga caattcttca gtggagatgt ggaggactct gacgacgacg
      181 atttcgacag tgacgtcttc tcccgtggag cggacgatac ggaccgcgat gacaacgcct
      241 aaacatggct gatggtttcc cattcgagga gtcaagacat ggcacacaga tcacgaccga
      301 cttcccaaaa acgtaataag gaaaaagccc ggcagcagaa acaaaaagat aaggaagctc
      361 gacggctcga aacaaaggcg cgcaagacca atgcagggcc gcagactggc gagaaagatc
      421 tggggcttgc cggcattaaa cccggccctc agcccctccc agagcagtgg gattatgtca
      481 gcggtcatga ctagcatcct cgacagaaag gctcccctag ggctgtcgat gttgcgacgc
      541 ttgacttaaa gtgcttatcg cgatgtcagt gaccacacac ctatgagtca cctgctagcg
      601 ctcgctccca tgcagctgca ccgccttcgc cggagtcgtc aacggcaacg gcttgcccgc
      661 tgcgccgtcc tgtacgatat ggcatacgcg atagcagcag aggcgacatc acactgcgag
      721 gagattgaca cctagagact ggcatcttac actggcgccg ctgatctctt atcagccaga
      781 atacattacg gaggtgcaat cgccatgaac tgcttatccc gacatctcgt gtacggctcc
      841 cgtggcatga tctgctcgaa ctcgccgttg gccgccagtg ctggtctcaa ggtcctccaa
      901 gaaggcggca atgcctttga tgccgccctg accgtcgccg ccacggagtc cgtcacgatc
      961 gtgccggcat gtggattagg tggcgatgcc ttcattctcc tgtacgatgc cgccactggc
     1021 aagatcacga acatcaacag cagtggggtg gccgccacag gggccacctc cgcctattac
     1081 cgggaccagg gatgtcagac catgtcgctt gcgggaccgc atgcggtctc agttcccggc
     1141 gcggtagctg cctgggaagt agtc
//
LOCUS       DASQSL010000126         1179 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_55937, whole genome shotgun sequence.
ACCESSION   DASQSL010000126 DASQSL010000000
VERSION     DASQSL010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55937"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..693)
                     /locus_tag="VE844_01315"
                     /pseudo
     CDS             complement(1..693)
                     /locus_tag="VE844_01315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018635311.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ISAzo13 family transposase"
BASE COUNT          243 a          348 c          314 g          274 t
ORIGIN      
        1 attgttctct gtgagatcgt agactccgta gggaatggct ttgccgtcgg cctgccccgg
       61 gaagtcgtaa gtggatacct cgactggttc accacgggga tgccattctt taccggcctg
      121 ggcgtagcgt cccaccaatt cctttttctt ggtgtccacg ctgatcacag ggtcgccgct
      181 ggtgaggaac tgcgctgcaa gggcattgag gtaccggaac tgggcgtcac ggtcggggtg
      241 ctggcgtcct tccagggtct tgcgggtagc ttgcaggctg tatccgcagg aatgcagaat
      301 gttcgcgacg accgaatgac tgatggcgtg gcctcttgca gtcagttccc cggcgagttg
      361 acgcgtcgat ttggtagtcc atcgcagcgg tgactccgga tctccgcggg tgcccggttc
      421 aatcaacgca tccaacgcat ccagcagttc cggatcggtg acttctgctt ttttgcggcc
      481 accccctggc gctcggactc gacgaccaga ccgcgtaggt tcatcttcgg cgagttcgtc
      541 catgccgcgc cggatcgtcg tccgcgacgc acccgtcgct cgatgcacag cgctaatttc
      601 accccgcccc cactatttcg cctcagtggc catcgcaaca cgatgatcgc gctcatctaa
      661 tcggggcagc agatccgcca aacgtgcccg catcaactcg aagtttgcat catccttgat
      721 agccataagg ctaacactgt catgcggtga tcggcactga ggaaacgaca cgcggcgcaa
      781 cgaagaatac actagattgg attagttatt tacttacagt tacttatccc gctaggcggt
      841 ccgagcgacg cctcactggg tactactaca caggttgatg ctcacaaaat gctgccgctt
      901 actatcttgt atcgattcgc tggccgcgtc ggctcgctat tccctgcttt ggtaatgcat
      961 cgtatcctag cctcgacgcc aagacatcat gggcagaaga tatacacaaa ccatgaatgc
     1021 atatgcttat aggctcgtag cccaaggccg agacatcacg ggtccgcgca gcatccaaaa
     1081 aatcccctgc gctgcaccag gtgatactcg aatagcttga cgtctgccgc gtaaacatgt
     1141 tggcaccgtt agtaattgac accataacag tagtcattt
//
LOCUS       DASQSL010000127         1733 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_138252, whole genome shotgun sequence.
ACCESSION   DASQSL010000127 DASQSL010000000
VERSION     DASQSL010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1733
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138252"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..757
                     /gene="fmt"
                     /locus_tag="VE844_01320"
     CDS             <1..757
                     /gene="fmt"
                     /locus_tag="VE844_01320"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015280187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HZC00037.1"
                     /translation="LRQPPSLKGAEAARELAALNADLMIVVAYGLLLPPSILITPRLG
                     CLNVHASLLPRWRGAAPIQRAILAGDQETGITLMQMDEGLDTGPVLRQVSCAIRPDDI
                     AQSLHDRLAGLGAECLLAALAAILTGSLAPIPQDEPRATYAPKIDRAEARLDWTRSAV
                     ELDRMIRAFNPKPVAMTQLQGIEMRVWEGVAIDDPIDRPPGSIVRCNKGYLDIATGKG
                     ILRLLKIQLPGRRVVTMTDFLNAHPEFYPRTVL"
     gene            819..>1733
                     /locus_tag="VE844_01325"
     CDS             819..>1733
                     /locus_tag="VE844_01325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020483864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC00038.1"
                     /translation="MRSALKAIAMQRLRTGLTLLAMGIGVVSVVVLTALADSVRRYVV
                     GEFASLGTHLVIVLPGRAETTGGHPPLLGETPRDLTLEDAYALVRSPHVERIAALVIG
                     SAPVSAAGREREIRLIGSTAELKSIRRLSLAQGRFLPEMDPHQATPVCVLGKTLRDEL
                     FGNRRAVGETLRIGDRRFRIIGVLAEEGHNIGINFDDNVIIPVASALTLFDTASLFRI
                     FTEVQSREAIAAAKEDIRTIIKTHHEGEDDVTIITQDSVVATFDRIFKTLTRMVASIA
                     GISMAVAGILIMNVMLISVTQRTAEIGLL"
BASE COUNT          347 a          514 c          505 g          367 t
ORIGIN      
        1 gctacgccaa cccccatcac tgaaaggcgc tgaagcggcc cgagaacttg cggcattgaa
       61 cgccgatctg atgattgtag tcgcctatgg gctattatta cctccttcca tattaataac
      121 gccccggctt ggctgcctca atgtgcatgc ctcattgctg ccccgctggc gaggagcggc
      181 tccgattcaa cgcgcgatct tggcaggcga tcaggaaacc gggatcacgc tcatgcagat
      241 ggatgagggc ctcgataccg gaccggtatt gcgccaagta agctgcgcta tccggcccga
      301 cgatattgcc cagagcttgc atgatcgtct agccgggctc ggggcagaat gcctgctggc
      361 tgcactcgct gccattctga cgggcagcct tgcgcctata ccccaggatg agccgcgtgc
      421 cacctatgcg ccgaagatcg accgtgctga agcgcgtttg gattggaccc gatccgctgt
      481 tgagctggat cggatgatcc gtgccttcaa tcccaaaccc gtcgccatga cccagttaca
      541 aggcatcgag atgcgcgtct gggaaggggt ggccatcgat gaccccatcg atcgaccccc
      601 cggatcgatt gtgcgctgta acaagggtta tctggatata gctacgggta aagggatctt
      661 aagactgttg aagatccaac tgcctggcag gcgcgtggta accatgaccg attttctcaa
      721 cgcccatcct gaattttatc cccgcaccgt cctataatag atcgcttgtt aagatacccg
      781 tcgcgatcta ttagcatacg gtgaggcccc aggatatttt gcgtagtgca cttaaggcga
      841 tcgccatgca acgcctgcgc acgggcttga cgctgctggc gatggggatc ggggtcgtct
      901 ccgtcgtggt gcttacggca ttggccgaca gcgtccggcg ctatgtcgtc ggcgaattcg
      961 cctccctagg cacccatctc gtcatcgtct tgccgggccg ggccgagacc accggcgggc
     1021 atcccccgct gttgggggag acaccccgcg atctcaccct ggaggatgcc tatgccttag
     1081 tgcgcagtcc ccatgtcgag cgcatagccg cgctggtcat cggatcagcg ccggtttcag
     1141 ccgccggacg cgagcgggag atccggctca tcggatcgac tgccgaattg aagagcattc
     1201 gccgcttgtc tttggcccag ggccgatttc tgccagagat ggacccgcac caagccacgc
     1261 ccgtatgcgt gctcggcaag accttgcggg acgagttgtt tggtaacaga cgggcagtgg
     1321 gtgaaaccct ccggatcggt gatcgccgct tccggatcat cggggtattg gcggaggaag
     1381 gacataacat cggcataaac tttgacgata acgtcattat ccccgtcgct tcggccttga
     1441 ccctgttcga caccgcttcg ttgtttcgca tcttcaccga agtccagagc cgggaggcga
     1501 tcgcggcggc caaagaggat atccgtacga ttatcaaaac ccaccacgag ggagaggatg
     1561 atgtgacgat catcacccaa gacagtgtgg tggcgacctt tgacaggata ttcaagacct
     1621 tgacccgtat ggtggccagt atcgccggga tcagcatggc ggtcgccggg atattgatca
     1681 tgaatgtcat gctgatctca gtcacccagc gcaccgcaga gatcggcttg ctc
//
LOCUS       DASQSL010000128         1026 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_69636, whole genome shotgun sequence.
ACCESSION   DASQSL010000128 DASQSL010000000
VERSION     DASQSL010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69636"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(97..444)
                     /locus_tag="VE844_01330"
     CDS             complement(97..444)
                     /locus_tag="VE844_01330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004164075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system HicB family antitoxin"
                     /protein_id="HZC00039.1"
                     /translation="MEDKFDGFTVNLYLDEDGDWIAHFLELPNISAFADTPEQALKEL
                     AIAWEGVKESYCKHGEAVPVAPARREYSGQFNVRIDKRLHRALAIEAARAGVSLNALV
                     AQKLATSIKHERS"
     gene            complement(428..715)
                     /locus_tag="VE844_01335"
     CDS             complement(428..715)
                     /locus_tag="VE844_01335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004164102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003729 - mRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HZC00040.1"
                     /translation="MSWQPFNASVQSWIGHTRHGEMEGLRRVLLAGTPFIPVSRCGWL
                     FDHQSGSHEIWFSPGRKRLPIQPASNGKAKAYQIRQFLKVQDEEESNGGQV"
BASE COUNT          216 a          321 c          242 g          247 t
ORIGIN      
        1 cttggttatt tctatcggcg ccttgacaag cgaggtatgc cttgtcctcg gttgcataat
       61 gaggcgcggc aggaggccgc tatgctctgc acgttatcag ctgcgctcat gcttgatgct
      121 cgtggccaat ttctgcgcga ccagcgcgtt caggctaacc ccggcccggg ctgcctctat
      181 cgccagggcc cggtgtaacc gcttgtcgat gcgcacatta aactgaccgc tatattccct
      241 ccgcgcaggc gctaccggga ccgcttcccc atgcttgcaa tagctttcct tgacgccttc
      301 ccacgcgatg gcgagttctt tcaacgcctg ctcgggggta tcggcgaacg ccgaaatgtt
      361 tggcagctcc agaaaatgtg cgatccaatc cccatcctca tcaagataga ggtttacggt
      421 gaacccatca aacttgtcct ccattgctct cctcctcatc ctgtaccttc agaaattgcc
      481 tgatctgata agccttggcc ttgccattgc tggccggctg gatcggtaag cgcttccgcc
      541 caggcgagaa ccaaatctca tgactccccg actgatggtc aaacagccac ccgcaccgtg
      601 acactggaat aaagggcgtc cccgccagca gcactcgcct caatccctcc atctccccat
      661 gccgggtatg gccgatccag ctctgcacgc tggcgttgaa cggttgccag ctcaagtgcc
      721 ctcctggtgg tgccgcggca gtttgcgcac cccgtaggct aggatgagtc gaaaacgaat
      781 cccagcaatg aataatccca aagctgggat tcattgcatt catcccagcc tacgcgctac
      841 cgcctgcctc cacagagctg gccgcttgag gaaggtgtcg ccgagaagag ccgcacccat
      901 ttaacttaga ggctcactta acaaatgtgt cctgacatca acctcttctc aaaatttcgt
      961 tggtcaacca ggaaattttt cacatttatt ttgtgaaata tttaccttgt aaatctattt
     1021 actcaa
//
LOCUS       DASQSL010000129         1252 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_42144, whole genome shotgun sequence.
ACCESSION   DASQSL010000129 DASQSL010000000
VERSION     DASQSL010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42144"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            2..400
                     /locus_tag="VE844_01340"
     CDS             2..400
                     /locus_tag="VE844_01340"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006236947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HZC00041.1"
                     /translation="MVENRKINPWTWQDQFGFSQAIETTGHTRVLRCAGQTSVNAEGE
                     PVHDGDMAAQITQALDNLETVLQAADMALANVVRLNLYVTDIDAALENFGPMEERLAV
                     AGIQPAITLLGVSRLFIPSLLVEMEADAVA"
BASE COUNT          253 a          360 c          369 g          270 t
ORIGIN      
        1 aatggttgag aatcggaaga tcaatccatg gacatggcaa gaccagttcg gattctcgca
       61 ggccatcgaa acgacgggcc acacgcgggt cctgcggtgc gccggacaaa cgtctgtgaa
      121 tgccgagggt gaaccagtcc acgacggcga catggctgcc cagatcacgc aagcgctcga
      181 caacctggag accgtgctgc aggcggccga catggcgctc gctaatgtcg tccgcctcaa
      241 cctgtacgtg accgacatcg atgccgcact agaaaacttc gggccgatgg aggagcgcct
      301 ggccgtagcc ggcatccagc ctgcgatcac cttgctgggt gtgtcgcgcc tcttcatccc
      361 gtcgctgctg gtggagatgg aggcggatgc tgtcgcatga gtctcgccga gctgtaaggc
      421 caagacttct ccgaccgcgc acgcggcaat gagcgcgcgg acagtacgcc acagagagca
      481 ccttctactg agagtggtgg gtttgtcgtt gccactgtcg tcctctcaca caccgccagg
      541 cctgatcctg ctcctcattt ccatttatcc agctaggctc ctcacgtagc ttgtatcgaa
      601 aagtattaat gtgacttccg gcaggtcgtc atgacagaat cgaccgacgg ggcacgtacc
      661 ctaggcgagt ggcgccttca agagggcaat actgtgacgc acgtcgactc gaggtagatc
      721 attaaggtat tggtgacttt accgaccgag tgcgcctcct tcaagtgttg tgctatcagg
      781 agcctgaggt catccctggt aggcgcgatg atctggctgc cgcattgttc atgtccacat
      841 tgaaaccggt acacccctgc atttgtaacg tcgatattgg gcggcgactg cggtgatggg
      901 aagttcatct tcatacccta actttcggat gacagcctgt gtccagttca gtgctacgct
      961 gtccatatta ggcttctgga ggcgaggcat gccggagtcc cctaagcttg attatgagct
     1021 tgggaactac atgacttggc cgggacagag ccgttgagca ggggttttgg ttgaccttga
     1081 ttcgccgcaa aaaactgtgg gtgtctcccc tgtagggcac gtggagggca cggagttctt
     1141 gcggtcagcc ccgaccaagc agtcagagtc ctagacgcgg tacgcgacca gggacgaacc
     1201 ggacggcacc tggtgatctt cttcgctctg ctctactacg ccgtccccgc cc
//
LOCUS       DASQSL010000130         1456 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_165421, whole genome shotgun sequence.
ACCESSION   DASQSL010000130 DASQSL010000000
VERSION     DASQSL010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1456)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1456)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1456
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165421"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(12..940)
                     /locus_tag="VE844_01345"
                     /pseudo
     CDS             complement(12..940)
                     /locus_tag="VE844_01345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020503376.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT          316 a          436 c          363 g          341 t
ORIGIN      
        1 gttccgggga gctatgtgag caagagatcc agtagcgctc ctaacaacgc tttgcctcgt
       61 cgtctgacgt tgtgaacaaa ttcaaagaat cccacatata gtggcaagtt ctcttgtgag
      121 atgccgcgat gcggacgtaa ccacgacctc agcagtgacc aaaagccttc catggtgttg
      181 acatgcactt catacacgcc atcgccgtcg tcatcacggg catattcccc acggccatgg
      241 cagacgctct gatgtgcgta gttccactgg tccatacggc tatagatgtc gtactcatcc
      301 gtgtacacac acgcgcccgg ggcaatcgtc gcttggatga gcggcttgat cgtcatttgt
      361 tggacgtttt ccaacatccg aatgaccgca tcaccgccac gctggatcat cccaaaaatc
      421 ggcggcttct cggtggcaag cgtgcctcgt ccccgcttgc ccctaagccg tctgcgccgt
      481 ccgcgtcgcc cttttttgcg accgcatcag gcttgccttt gtggccagcg acaagataga
      541 cctcgtcaca ttcgacctcg tctgtgaagg tcggcgacgg cttcttggcg acaataccgt
      601 ggcgcaactg accagtcatc tgatgcacat cagactggtg gagatcgagt tccttggcta
      661 tttgagcatt cgagaggttc agacccagga agtacaggca cagcatccag acccgcagcg
      721 gttgatgatg accagcaaac accgtgtcgg ttaaatcgtc gaagtggcgg cgacaggact
      781 tgcacaggta gcgctgacgc tcgggctggg tgtcgtcacg accttgtttg gtcacctcag
      841 agctgtcaca acttgcacaa cggacaccgt ctggccagcg tagggcacgg acggtctcaa
      901 agcatttggc gtcgtcgatg agtgattgaa tgtgtatcat cgcaccagta tcgccttttg
      961 gacgaaacgg cacaagagcc caatacaagg cgagcgatcc ttacaaaagg cagcgctggc
     1021 aactccctgg aatccgaatt gagcctacat ttatattcct gagccatttt tctcaccccc
     1081 ttgcggtcgc tgctcagacc cctgagtcag cttcttaagc accctccatt tgggcgtgca
     1141 cagcacgcat agcacattga gcgtcaggat tccctccttt ctctgcccac tgctgtgcat
     1201 ttctctaagg catggccatc cgtcgcaatc aaaccctcgg cgtgaattct cgagcccttg
     1261 tatcagctcc cgccaaaacc tctcatacgc gttttgtcgg tacaagctct gtaccagcct
     1321 gcaagatgtg ccatgacggt agtcagcacc aagcgaccag ttccggccac cgcgctactc
     1381 acacggcttt tcttctctat cgcagtgata aatcacaata tttcagttct cattttgaga
     1441 cgagctgggc gcatcg
//
LOCUS       DASQSL010000131         1049 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_69667, whole genome shotgun sequence.
ACCESSION   DASQSL010000131 DASQSL010000000
VERSION     DASQSL010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69667"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(58..>1049)
                     /locus_tag="VE844_01350"
     CDS             complement(58..>1049)
                     /locus_tag="VE844_01350"
                     /EC_number="2.3.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012637080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="homoserine O-succinyltransferase"
                     /protein_id="HZC00042.1"
                     /translation="ALHQDIRELHIGLLNMMPDAALAATERQFFRLVGESNQIAQFYM
                     HPFTLEALPRGPEAASHIARYYETFAEIKAAGLDALIITGANVTEPDLSLEPFWRPLI
                     EVIDWAYAQVTSTLCSCLATHAVLQFRYGQKRRRLAAKRWGVYSHHVTDCRHPLVRGV
                     NTRFDVPHSRYNEVSREQFEAAGLRVLVQNEAAGVHLAVSEDGFRLVFFQAHPEYDTI
                     SLLKEYKREVYRFAGGERDDYPPFPEHYFTPMIQALLEEYADRVRAAKDNGEPLPDMP
                     ESLITPYLDNTWHDTGEAVINNWIGKVYQITHNDRRRPFMDGIDPNDPLGLRG"
BASE COUNT          223 a          307 c          317 g          202 t
ORIGIN      
        1 gggattgact ggagagtcgg gaaggaaaga ccccccaacc cctgacccct cgatccccta
       61 tccccgcaaa ccgagcggat cgttcggatc gatcccatcc atgaaaggcc ggcggcggtc
      121 gttgtgggtg atctgataga ccttgccgat ccagttgttg atgacggctt caccggtatc
      181 gtgccaagta ttgtcgagat agggcgtgat cagagactcg ggcatgtccg ggagcggctc
      241 gccattgtcc ttcgcggctc ttacccgatc ggcgtattct tcgagtagcg cctgtatcat
      301 cggggtaaaa taatgttcgg ggaaaggcgg ataatcgtca cgctcgccgc cggcaaagcg
      361 atagacctcg cgcttgtatt ccttgagcaa gctgatcgtg tcgtactcgg gatgggcctg
      421 aaagaagact aggcggaaac cgtcttcgct gaccgccaga tggacacccg ccgcctcatt
      481 ctgcaccagc acccgcagcc ccgccgcctc aaactgttcg cggctgacct cattataacg
      541 ggaatggggc acgtcgaacc gggtattcac ccccctcacc agaggatgcc ggcagtctgt
      601 gacatggtgt gagtagaccc cccaacgctt ggcggccagg cgacggcgtt tctggccata
      661 gcggaattgg agcacggcat gggtagcgag gcaagagcag agggtggaag tcacctgcgc
      721 gtaggcccag tcgatgacct caatcaaggg tctccagaag ggttcaagcg agagatccgg
      781 ctcggtcacg ttggcccccg tgatgatgag cgcatccagt ccggccgcct tgatctcggc
      841 aaaggtctca tagtaccggg caatgtggga ggccgcctcg ggtccacgag gcaatgcctc
      901 cagcgtgaag gggtgcatat aaaactgagc gatctgattg ctctcgccca ctaggcgaaa
      961 gaattggcgc tcggtagccg ccaacgctgc atccggcatc atattcagca ggccgatatg
     1021 caactcccga atatcctggt gcaacgcga
//
LOCUS       DASQSL010000132         2047 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_42166, whole genome shotgun sequence.
ACCESSION   DASQSL010000132 DASQSL010000000
VERSION     DASQSL010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2047
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42166"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            120..1121
                     /locus_tag="VE844_01355"
     CDS             120..1121
                     /locus_tag="VE844_01355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZC00043.1"
                     /translation="MPRQIGDIVLEVHDLHTHIFTRWGVVRAVDGVSFYLRQGETLGI
                     VGESGCGKTMTALSLLRLVPRPGGRIVQGKIMLEGENLLEKSDNEMRHIRGRRISMIL
                     QDPQTSLNPVFTIGNQLIEGIRIHHHHEGYQALVRRAIQALKQVRVAAPERRVQDYPH
                     QMSGGMKQRVVGAISISCEPRVIIADEPTTSLDVTIQAQYLRLLREIQEETGLSLIFI
                     THDFGIVAKMCDRVMVMYAGRVVESGPVREIFNKPSHPYTQALLSSVPKLEERPERLY
                     SIQGQPPALWDVPPGCRFAARCPYADDRCQQEYPPSYTIGDGHTADCWRLEDSWKGN"
     gene            1106..>2047
                     /locus_tag="VE844_01360"
     CDS             1106..>2047
                     /locus_tag="VE844_01360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012609414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HZC00044.1"
                     /translation="MERQLILRVENLKKHFAVTKGLLVMKVVGWVKAVDGISFSIREG
                     QTLALVGESGCGKTTTAKLVLRLESPTEGRVFVDGKDVHSLQGNDLKDYRTTVQAVFQ
                     DPWSSLCPRMRVREIVAEPLVINRKLSRPEVNARVEEMLAAVGLRAQQANLYPHEFSG
                     GQRQRIAMASALISNPKLIVLDEPVSALDVSIRAQIMNLLVDLQQQFHVSYLLIAHHL
                     ATTRYMAHEVAVMYLGKIVERAETEELYKNPLHPYTKALFSAALPSHPDIDHEEIILT
                     GEVPSPINPPSGCHFHPRCPFAMPHCAEVEPEEKEIAP"
BASE COUNT          425 a          603 c          619 g          400 t
ORIGIN      
        1 ttttcatctc ttgaaggcgg cgaagtaaaa ggagagtgct gggtgctgag gcctgagtga
       61 agaggacctc ccacttcaca gcactcatga ctcatcactc gtgattccat aggtgctgta
      121 tgcctcgaca gatcggcgac atcgtcctgg aagtgcatga cctccacacc catatcttta
      181 cccgttgggg agtggtgagg gcggtagacg gagtgagctt ctatctgcgc cagggggaga
      241 ccctggggat cgttggtgag tccggctgcg gcaagacgat gaccgcgctc tccctgctcc
      301 ggttagtgcc ccggccgggc ggtcggattg tgcaagggaa gattatgctg gaaggggaga
      361 atctgctgga gaagagtgac aacgagatgc ggcacatccg ggggcgcagg atttcgatga
      421 tcctccagga cccgcagacg tcgctgaacc cggtgttcac catcggcaac cagctcatcg
      481 aaggcattag aattcaccac caccacgagg gctaccaggc gctggtgcgg cgggcgatcc
      541 aagccctcaa gcaagtgcga gtggcggcgc ccgagcgtcg cgtacaggat tacccacacc
      601 agatgagcgg tggcatgaag cagcgggtgg tgggcgccat ctcgatctcc tgtgaacccc
      661 gcgtcatcat cgctgatgag ccgaccacgt cgctcgacgt gaccattcag gcccaatacc
      721 tacgcttact gcgggagatt caggaggaga cgggattgtc cctcatcttc atcactcatg
      781 actttgggat cgtggcgaag atgtgcgacc gcgtcatggt gatgtacgcc ggccgcgttg
      841 tcgaaagcgg cccggtgcgg gagattttca ataagccatc gcatccttat acccaagcgc
      901 tgctgagctc tgtacccaag ctggaggagc gcccagagcg cctctattcg atccaaggcc
      961 aacctcctgc cctgtgggat gtccctccag gttgtcggtt tgcggcgcgt tgtccctatg
     1021 ccgatgaccg gtgccaacag gaatatccgc cctcgtacac gatcggagat ggccataccg
     1081 ccgattgctg gaggctagaa gattcatgga aaggcaactg attctccgtg tcgagaattt
     1141 gaagaagcat tttgctgtaa ccaagggcct cctggtgatg aaggtggtcg gctgggtgaa
     1201 agccgtggac ggtatcagtt tctcgattcg agaagggcaa accttggcct tggtagggga
     1261 gtcaggctgt ggcaagacga ccaccgccaa gctcgtcttg cgtctggaaa gcccgacaga
     1321 agggcgggtc ttcgtcgacg gcaaagatgt gcacagcttg cagggaaacg acttgaagga
     1381 ttaccgcacg acggtccagg cggtgtttca agacccctgg tcatcgctct gcccgcgcat
     1441 gcgggtacgg gagatcgtcg ccgagccgct ggtgatcaac cgtaaactct cgcgcccaga
     1501 ggtcaatgcg cgtgtcgagg agatgctggc cgccgtcggt ttacgcgcgc aacaagccaa
     1561 cctctacccg catgagttca gcggtgggca gcgccagcgc atcgccatgg ccagcgcgct
     1621 gatctccaac ccgaagctga tcgtcctcga tgagccggtg tcggccctgg acgtctccat
     1681 ccgggcgcag atcatgaacc tgctcgtcga cctccagcag cagttccatg tcagttacct
     1741 cttgatcgca catcacctgg cgacgacccg ctacatggca catgaagtgg cggtcatgta
     1801 cctggggaaa atcgtcgaga gggcggagac tgaagagctc tataagaacc cattacaccc
     1861 ctacacaaag gcgctgtttt ccgccgccct ccccagccat ccggacatcg accatgagga
     1921 gatcattctg accggcgagg tgccctcgcc cataaacccc ccgtctggct gccactttca
     1981 tccccgctgt ccctttgcga tgcctcactg cgccgaggtc gaacccgagg agaaggagat
     2041 cgccccg
//
LOCUS       DASQSL010000133         1493 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_165423, whole genome shotgun sequence.
ACCESSION   DASQSL010000133 DASQSL010000000
VERSION     DASQSL010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1493)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1493)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1493
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165423"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1185)
                     /locus_tag="VE844_01365"
     CDS             complement(<1..1185)
                     /locus_tag="VE844_01365"
                     /inference="COORDINATES: protein motif:HMM:NF033559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC00045.1"
                     /translation="MPDQPPYRSQVLDHLGLVAGMFDELGIGDVLDQATHQNPEMRDL
                     TVGEAVKAMVLNGLGFINQALYLVPRFFQNKPTSRLIAPRVTPAQLNDDALGRTLDTI
                     YAAGVTPLYSLIAATAAERLGLAPRFAHLDSTSFHVDGRYNSDEEPEDKVVHITRGYS
                     RDHRPDLNQVMLELIVEHQAGIPILMQPLSGNSSDAQDFGEVIGIHVRQLQTTYGLTY
                     LVADSALYSEANLQKLAQTHMKWITRVPATVSAAQAILAQTAPQLLAPLKAGYRYHEF
                     PSNYGGIEQRWVLIYSERRQAQARRTVDKQWRQQSDKETKAFQQSCRTTFACEADARQ
                     ALSTFEQDLQTLYLAASTVRAQPRYSKRGRPGPDARPDQVVYQLDGALASTLTARQAL
                     IDQ"
     gene            1263..1415
                     /locus_tag="VE844_01370"
     CDS             1263..1415
                     /locus_tag="VE844_01370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00046.1"
                     /translation="MQKVGQITLINLEQAKLEEVFLPYLVMPSNKTMFETMEHNQFLL
                     PDKYHR"
BASE COUNT          320 a          373 c          472 g          328 t
ORIGIN      
        1 ctggtcgatg agggcttggc gggccgtgag cgtggaggcc aaggctccgt cgagctggta
       61 gaccacctgg tcgggtcgag cgtctgggcc gggtcgaccc cgtttgctat agcggggctg
      121 cgcgcgcacc gtgctggcgg ccaaatatag cgtttgcaaa tcctgctcga aggttgaaag
      181 ggcctgacgt gcatcggctt cacaggcaaa ggtggtgcgg catgattgct gaaaggcttt
      241 ggtttctttg tcactctgct ggcgccactg cttgtcgacg gtgcggcgcg cctgggcctg
      301 gcggcgttcg gaatagatga gcacccagcg ttgctcaatc ccgccgtagt ttgaggggaa
      361 ctcatgataa cgatagccgg ctttgagcgg tgccaggagc tggggggcgg tttgagccag
      421 gatggcttgg gcggcactca cggttgccgg aacgcgcgta atccacttca tgtgtgtctg
      481 ggcgagcttc tggaggttgg cttcactata gagggcgcta tccgccacca gataggtcag
      541 gccgtaagtg gtttgcagtt gccgcacatg gatgccaatc acctcaccaa agtcttgggc
      601 atcactgctg ttgccgctga gcggttgcat cagaatgggg atgcccgctt gatgctcgac
      661 gatcagctct aacatgactt ggtttaagtc aggccgatga tcccggctgt accctcgggt
      721 gatatgtaca accttgtcct caggctcctc gtcactgttg tagcggccat cgacatgaaa
      781 gctcgtgcta tcgagatggg caaaacgggg cgcaaggccc aggcgctctg cagcggtcgc
      841 ggctatgagg ctgtagagtg gcgtcacgcc agcggcatag atggtatcca aagtccgccc
      901 gagggcatca tcattgagtt gcgcgggggt gacgcggggc gcaatgaggc gagaggtggg
      961 cttattctgg aagaacctgg ggaccaggta gagtgcttga ttgataaacc ccaggccatt
     1021 gagcaccatg gctttgaccg cctcccccac cgtgaggtcg cgcatttctg ggttttggtg
     1081 ggtggcttga tcgaggacgt cgccaatgcc aagttcatca aacatgccag cgacaaggcc
     1141 gagatggtcc aagacttggc tccggtacgg gggttgatcg ggcatcgcta tctcctctaa
     1201 tagtgaggag attgtatagg accttccggg aaacacaaaa ataactctca tagcagagat
     1261 cgatgcagaa agtcggacag attaccctga tcaatcttga gcaggcgaaa ctggaagagg
     1321 tctttctgcc ctatctggta atgccaagca acaagaccat gtttgaaacg atggagcaca
     1381 atcagttctt gttacctgac aaataccata gatgatgaaa aacggccggt gaacaatgta
     1441 gcactattaa aaatggtctt ttccaagcag gtcaaagcgt agcgtggacg gcc
//
LOCUS       DASQSL010000134         1384 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_179543, whole genome shotgun sequence.
ACCESSION   DASQSL010000134 DASQSL010000000
VERSION     DASQSL010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1384
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179543"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            201..938
                     /locus_tag="VE844_01375"
     CDS             201..938
                     /locus_tag="VE844_01375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00047.1"
                     /translation="MMPWAHGHQIKAIATFVAAIIAKQTGCQAELARTQGNQEGTKRL
                     SRLVHNARLSPKDFAEWLCCRALEQAPCTGQVRVTIDWTSEDKQHLLVISLVVGRRAL
                     PIFWRAYDRTVLKGRMKRYERAVLKRAFKLIFEYVEPRRLKLTADRGFPDDDLFELLD
                     QLGVFFILRVKGSVKVKVDNQWRKLNSLRFAGTARRRNLGRLAYCESKPRQVWSTMSR
                     ARNKPGPWEVWYLVSNRPLRAKRMATE"
BASE COUNT          309 a          372 c          399 g          304 t
ORIGIN      
        1 ggggaggagg aaggaaaaag gcgcggggaa aatgaaacag agattgacga cggtcaacct
       61 ctgttgtggg gctgatgtcg ggacacattt tgtaaattag cgtatcggcc gaagttaagg
      121 agctgtgcga aactgttggc actatgagaa atacgctaac agttccagat acaacacgcc
      181 ttgaagcgtt tattaaagaa atgatgccat gggcacacgg tcatcaaatc aaagccattg
      241 ccacctttgt cgcggcgatc atagccaagc agacgggctg ccaggccgaa ctggcgcgga
      301 cgcaaggcaa ccaggagggg actaaacgcc tctcgcggct ggtccacaat gcgcggctca
      361 gtccgaaaga ttttgccgaa tggctctgtt gccgggcgct cgaacaagca ccgtgcacgg
      421 ggcaggtacg ggtgaccatt gactggacga gcgaagacaa gcagcatctg ctggtgattt
      481 cactcgtggt tgggcgccgc gcgttgccga tcttctggcg cgcctatgat cggaccgttc
      541 tcaagggccg aatgaagcgc tacgaacggg ctgtgctgaa acgcgctttc aagttgatct
      601 ttgagtatgt cgagcctcgc cgtctaaagc tgacggccga ccgcggcttt cctgacgatg
      661 atctgtttga gttactcgac caactggggg tcttcttcat cctgcgtgtc aaagggagcg
      721 tcaaggtcaa ggtcgataac cagtggcgta agctcaacag cttgcgtttt gccggcaccg
      781 cgcggcgccg taacctcggt cgcctggcct actgcgaaag caagccccgt caagtatgga
      841 gcacaatgag tcgcgcgcgc aacaaacccg gcccctggga ggtctggtat ctggttagca
      901 atcgtccctt gcgcgctaaa cggatggcca ccgaataggg ttatcgcttc tgctgcgagg
      961 aaggtttccg cgacgcccag tggtatctcg gcttcgccca agctcgggtc aaagcgatca
     1021 cagcctggtc acgtttgttt gccctcttcg ctatcgcctt gcttgccctg accagcctgg
     1081 ggatgcgatt actgatccgc ggcgggtcaa cagcgcaatc actgctgcgc cgcggcgctt
     1141 ctcggcgaag cgatcggtgc aaattgagct tgatcgccgc cattatcact ctcgttcaac
     1201 acgattggac tttactgaat tcgctatcgc cccacactaa actcaacttg gaggctactt
     1261 tatcaaatgt gtcctgacct cagcttcaat gccatttaaa gcttccgtgt aaccttccag
     1321 aaggataagt tcagagagga tttgtgaacg tcggcgaggg atatcggcat cggctatatc
     1381 cgtt
//
LOCUS       DASQSL010000135         2014 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_69712, whole genome shotgun sequence.
ACCESSION   DASQSL010000135 DASQSL010000000
VERSION     DASQSL010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69712"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            380..1741
                     /locus_tag="VE844_01380"
     CDS             380..1741
                     /locus_tag="VE844_01380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009240193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HZC00048.1"
                     /translation="MSHALIVDDDVDSLTALAVLVNREGFTTDTASTLREAREKMAER
                     RPDVVLLDLVLPDGNGMDLFQDIEPRSVTEVVLITGHASLETSVEALRLGAADYLIKP
                     VNVKQLQSILSRVARPADLKAEINKLRGDLRSLGHFGRLIGVSTAMQKVYDQIARVAP
                     TPATVLITGESGTGKELVSQTIHDLSRRKKELFIPINCGAISPQLIESEIFGHEKGSF
                     TGATRLHKGYFERAYGGTLFLDEITEMPTELQVKLLRVLETNTFMRVGGDEHLETDVR
                     VIAATNRPLAEAVAQGKLREDLLYRLQVFPIHLPPLRERTEDIDLLANHFLADINRIE
                     STHKAFTPEALAQLRTYPWTGNVRELKNVVHRAFIMADDVIDTPYLPRELGALPVVDG
                     NFLNVGVGMKIAEAERRLILATLKHCDGSKEKTAEMLGVSVKTLYNRLREYRAHSPLR
                     NSC"
     gene            1757..2014
                     /locus_tag="VE844_01385"
                     /pseudo
     CDS             1757..2014
                     /locus_tag="VE844_01385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007352267.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
BASE COUNT          455 a          580 c          541 g          438 t
ORIGIN      
        1 tactcatcta tacccagcat ctccgctgtt tgttccacgg gaagcctgct gctctcccgg
       61 tactcgtaga tcgcttcaaa tctcattttt ctcacctgct cgtggtttgt acggccgccg
      121 ggtggatgtg aatactctat acatccaagg ctcaaacacc gcccggcatc gcattactta
      181 ctagtacggc aatgtccata ccagcggctt taatgccatt attttgctga tttatcaata
      241 gcatagtgag tgttagcgat gtatcgaggt tgcttgatcg atccattcgg taacaattac
      301 aactttttcg tgtaaacttt acagtaaagg agtattctgt aagttccatt cgaaatatct
      361 gtaaggaagc taacctttca tgtcccacgc attgatagtc gatgacgacg tagattctct
      421 gacggcgctc gcggtattgg tcaatcgcga aggatttacc accgatacgg cgagcacctt
      481 gcgagaggct cgcgagaaga tggcggagcg gcgccccgat gtggtattgc ttgatttagt
      541 gctgcccgat ggcaacggga tggatctgtt tcaggacatc gaaccccgca gcgtcaccga
      601 agtcgtgctg atcaccggcc acgccagtct agagacctcg gtcgaggccc tgcgcctggg
      661 cgccgccgat tatctgatca agcccgtgaa tgtcaagcaa ctgcagagca tcttatcgcg
      721 ggtcgcccgt ccagccgatc tcaaggccga gatcaacaag ctgcgaggcg atctgcgcag
      781 cctcggtcac ttcggccggc tgattggggt atctacggca atgcaaaagg tctatgatca
      841 gatcgcccgc gtcgcgccaa cgcccgccac tgttcttatt acgggcgaaa gcggcaccgg
      901 taaggaactc gtctcgcaga caatccacga tctgagccgg cgcaaaaaag agctgtttat
      961 acccatcaat tgcggcgcga tctcgccgca actgattgag agcgagatat ttggtcacga
     1021 gaagggcagc tttaccggtg cgactcgcct gcacaaggga tacttcgagc gggcttacgg
     1081 cggcacgctg ttcttagacg agatcacgga gatgccgacc gagttgcagg tcaagctgtt
     1141 acgggtcctc gagaccaaca cgtttatgcg ggtaggaggc gatgagcacc tcgaaaccga
     1201 cgtgcgggtg atcgctgcga ccaatcgccc cctcgcggaa gccgtagccc agggcaagct
     1261 ccgtgaagat ctgctgtacc gcctgcaagt ctttcccatc catctgccgc cgttgcgaga
     1321 gcggaccgag gacatcgatc tactcgccaa ccatttcctg gccgacataa accgcatcga
     1381 atccacccac aaggctttta ctccagaggc gctggcacag cttcgcactt atccctggac
     1441 cggcaatgtc cgcgagctaa aaaatgtggt ccatcgcgcc tttatcatgg ccgacgatgt
     1501 gatcgacaca ccctatctac cccgcgaact cggagcgctc cccgtagttg acggcaattt
     1561 cttgaatgta ggggtgggta tgaagatcgc ggaagccgaa cggcgcttga tcctcgccac
     1621 cctcaagcac tgcgatggca gtaaggaaaa aactgcggag atgctcggtg taagcgtgaa
     1681 aacgctgtat aaccgcctgc gggagtatag ggcgcatagc ccccttagaa actcttgtta
     1741 gcacgccaag tacaccaaca aggcagtctg gcctaccctc attgcacgcc tgaacggcga
     1801 gcaacgggat cggatcgatg ccgtgctggc tacgatcggc ctcttggaat tccgtgaacg
     1861 gcgtgccggc acactctctc atggccagaa acaatggttg gagatcggca tgttgcttat
     1921 gcagagcccg cggctcttac tcatcgacga gccagtggcc ggcctgaccc atcaggagac
     1981 cgaacggacc gctgaattgc tcactaccct ggcc
//
LOCUS       DASQSL010000136         1019 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_14962, whole genome shotgun sequence.
ACCESSION   DASQSL010000136 DASQSL010000000
VERSION     DASQSL010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14962"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            134..304
                     /locus_tag="VE844_01390"
     CDS             134..304
                     /locus_tag="VE844_01390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00049.1"
                     /translation="MGTLRFADLQARPTEVLDLTSLTLHEFRQLVTPFDAAFQAHMAS
                     GRLDGKPRTIRR"
     gene            326..748
                     /locus_tag="VE844_01395"
     CDS             326..748
                     /locus_tag="VE844_01395"
                     /inference="COORDINATES: protein motif:HMM:NF025000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC00050.1"
                     /translation="MPTPEDRLLFILVYLKTYPLQVVQGRLFGMGQSKAHQWIHVLLV
                     VLRVTLRTLGDAPTRSLTELTQRLGVAEAEAAAMVEPLPGSLPAADLSTPAPAPASAS
                     PLLATRGPNGALSAPRIRLSKRAVIAARKGATRSKTSC"
     gene            664..>1019
                     /locus_tag="VE844_01400"
     CDS             664..>1019
                     /locus_tag="VE844_01400"
                     /inference="COORDINATES: protein motif:HMM:NF024752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC00051.1"
                     /translation="MERPQDPTEQTRCYSGKKRCHTVKNVLLIDALLTILFLSETYAG
                     STHDKRIADATPYPLPAGSQLLQDLGFLAFTLGQVEIIMPTRKPRGRKLTHTQKAANR
                     RIARRRVRIEHVNRSI"
BASE COUNT          216 a          316 c          289 g          198 t
ORIGIN      
        1 attttagccc tgaaagtgtc caaaaaactg ttgaccgata catgtcacgt caaaagcttg
       61 gagggaagaa tagatattag agttaatctc gatttatagt atcctgggcc tcccacaaca
      121 ggaggccacc gccatgggaa cgttacggtt cgccgacctc caggcccgcc ccacggaggt
      181 gctggatttg accagtctga ccctgcatga gtttcggcag ttggtcaccc cctttgacgc
      241 ggcgttccag gcccacatgg cctccgggcg ccttgatggg aagccgcgta ctattcgccg
      301 atagacgacc tacaagaact gtccgctgcc cacccccgag gatcggttgt tgtttatcct
      361 ggtctacctg aagacctatc ccctccaagt ggtgcaggga cggttgttcg gcatgggcca
      421 gagcaaagcc catcagtgga ttcatgtcct tttggtggta ctgcgggtga cgctacgcac
      481 actgggggat gccccgacac ggtccttgac ggagttgacc cagcgcctgg gcgtggccga
      541 ggccgaagcg gcagccatgg tcgagccgct gccggggtcg ctgccagcgg ctgatctgtc
      601 cacaccagcg ccggctccag catccgcctc ccccctttta gccacgaggg gaccgaacgg
      661 cgcattgagc gcccccagga tccgactgag caaacgcgct gttatagcgg caagaaaagg
      721 tgccacacgg tcaaaaacgt cctgctgatc gatgcgctgc tcacaattct ctttttgagt
      781 gagacctatg cgggcagtac ccacgataag cgcattgccg atgccacccc ataccctttg
      841 ccagcaggga gccaattgct ccaggatctt ggcttcctgg cgttcacgct cggccaggtt
      901 gagatcatca tgccgacccg aaagccacga ggacggaagc tcacacacac gcagaaggct
      961 gcgaatcggc gcatcgcccg tcggcgcgtg cgcatcgagc acgtcaacag gagcatcaa
//
LOCUS       DASQSL010000137         1796 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_96812, whole genome shotgun sequence.
ACCESSION   DASQSL010000137 DASQSL010000000
VERSION     DASQSL010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1796
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96812"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(241..1428)
                     /locus_tag="VE844_01405"
     CDS             complement(241..1428)
                     /locus_tag="VE844_01405"
                     /inference="COORDINATES: protein motif:HMM:NF033550.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3 family transposase"
                     /protein_id="HZC00052.1"
                     /translation="MDVYGIETLLGLPEFHVIHQIIGPKRLDVHLERRDSAIVCPHCQ
                     TCCSRVLESRPRCIRDLPILERPVVLWLHLRRFAWKACPHRPWETSETFGGRVKWSER
                     LYHQMRSEFLGGCPSREWARRYGLSQRTVFRWTFERSRGGRPRKLGRAIGIDEYARRK
                     GHAYNTSIVDLDKGRPIATFQGRRAKDVIAWFKSRPQAELARVEVVVLDMSKTYASAI
                     QELFGESVQVIDRFHVVKLAVDALDEVLRSVQKQLDPEEAKALKKLRRRWLKSANQLH
                     VDELIARYEWRRRFPQLREVIEWVQDLRLWFERKYDKPAREALSKLIERASQSAQEPL
                     KRMAGTLTRGFEPMVHYIRKRYSNGITEGFNNKIKLIQRMAYGLRNEPNRRRRIMASC
                     GKT"
BASE COUNT          392 a          531 c          437 g          436 t
ORIGIN      
        1 agtactaatt atcatacctg tatgatatgt atgatatgta tgagtttgtc ctactctttg
       61 gcctcagatt cactgcttgc cttcgttaaa ataatctctt ttattgattc tatattatct
      121 aacccatatt caaggatggt ctctataaat acagatttgc ttacgcttct cggataaact
      181 ctatgattaa agtctttata tcctttatca attggctctt tgccaggttt gaggctggac
      241 ctaagtcttt ccacaggagg ccattatgcg tcttcgacgg ttgggttcat ttcgaagacc
      301 atatgccatc cgctgaatca gcttaatctt gttgttaaag ccttccgtga tcccattgct
      361 ataacgcttc cgaatgtagt ggaccatcgg ctcaaaccca cgtgtcagcg tcccggccat
      421 tcgcttcagg ggttcttggg cgctttggct cgcccgctca atcagcttcg agagcgcctc
      481 gcgggctggc ttgtcatact tgcgctcgaa ccacaggcgc aagtcctgca cccattcgat
      541 cacctcacgc agctgtggaa agcgcctgcg ccactcgtaa cgcgcgatca actcgtccac
      601 atggagctga ttggctgatt tcagccagcg gcggcgcagt ttcttcagag ccttggcttc
      661 ctcgggatca agctgttttt gcaccgagcg cagcacctca tcgagcgcat cgacagccag
      721 cttcaccaca tggaagcggt cgatcacttg caccgactcc ccaaagagct cttgaatggc
      781 tgaggcatac gtcttggaca tatccaatac caccacttcc acccgcgcga gttcggcctg
      841 tggacgactc ttgaaccaag cgatgacatc cttagcccgt cggccctgga aggtggcgat
      901 cggtcggccc ttgtctaagt cgacaatgga tgtgttgtaa gcgtgcccct tgcgccgggc
      961 atattcatca atcccgatgg cgcggcccag cttgcgggga cgtccccctc gactacgctc
     1021 aaaagtccag cgaaacacgg tgcgttggga cagaccatag cgccgggccc actcgcggct
     1081 cggacagccg cccaggaact cagatcgcat ctgatggtaa agtcgctcgc tccatttcac
     1141 gcgcccaccg aaggtctcac tcgtttccca aggccgatga ggacacgcct tccacgcaaa
     1201 gcgccgcaga tggagccaca gcacaactgg acgctccagg ataggcaagt cacgaatgca
     1261 ccgaggccga ctctcaagca ctcgcgagca acaggtctgg cagtggggac acacgatggc
     1321 actgtcgcgt cgctcaaggt gcacatccag ccgcttgggg ccgatgatct gatggatgac
     1381 gtggaattct ggcagaccga gcaaggtttc gataccatag acatccatgg gcagggttcc
     1441 tctttctggt gatggctttt tccagaattt ggcgaggaat cctgcgcctg tcaatcactg
     1501 ctctatgtcc cctatcatca atctcatatc ctgacctcaa acatggcgaa gagccaaatt
     1561 cttttgttgt ataaatagag agactatagc aaggatgccg ggttacctcc gctcggtatt
     1621 tatcgtatcg tttgggtcct catctttgaa tcaggagtcc acaccatgtt cggtccaggc
     1681 gcgtatcgac ccgatccaag cgaaggcatc acaacgcccg cggagctgcc accacccgaa
     1741 cgcatctact accatcgctc tgacacccgg cacccgtgtc cacgctgtgg ccactt
//
LOCUS       DASQSL010000138         1084 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_56094, whole genome shotgun sequence.
ACCESSION   DASQSL010000138 DASQSL010000000
VERSION     DASQSL010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56094"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..146)
                     /locus_tag="VE844_01410"
     CDS             complement(<1..146)
                     /locus_tag="VE844_01410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016868407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NmrA family NAD(P)-binding protein"
                     /protein_id="HZC00053.1"
                     /translation="MTTLVTGASGHIGAHVVRHLLAQGRAVRALVRPTSNLKGLEGLD
                     VELV"
     gene            complement(430..828)
                     /locus_tag="VE844_01415"
     CDS             complement(430..828)
                     /locus_tag="VE844_01415"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HZC00054.1"
                     /translation="MRKEVFGAPTVYSPIRYAQGIKTTGGTIVWISGQVSQDKHGKMV
                     HKGDFAGQARQALSNLKAMVEAAGGTINDIIKVNTYLTDLRYREELARVRAEFFPEGK
                     LPASTLVGVTALADPDMLVEIEAIAVLPES"
BASE COUNT          217 a          335 c          305 g          227 t
ORIGIN      
        1 tgcaccagct cgacatcgag cccctctagg cccttgaggt tcgacgtcgg gcgcaccagc
       61 gctcgaaccg cacgcccctg ggccaacagg tgacgcacaa cgtgcgcgcc gatatggccg
      121 gatgcgccgg tgacgagggt agtcatcggg tttctcgtct cccatgttgg gttgagaggg
      181 tctaagctac aacttcagcc ccaaacattt cttgatatgc tttgcaaggg cttcgtcgat
      241 ttctgaacga cgtggaattg ggtgtttctg cccagtggca gggttgatac caataccatg
      301 acgtgcccca tggcgcaaca gaacacaccc tttaacttac ccaaccagga gcggtcaccc
      361 ttccactgca ccatcgttaa gtgtttattc ataagccaat cccactcaca tgcaggctct
      421 ctgcagacac tagctttccg gaagcacggc gatggcttcg atctcgacca acatgtcggg
      481 gtcggcgagg gcggtgacgc cgaccagcgt cgaggccgga agcttgcctt cggggaaaaa
      541 ttcggcgcgg acgcgtgcca gctcctcgcg atagcgcagg tcggtcagat acgtgttgac
      601 cttaatgatg tcgttgattg taccccctgc cgcttccacc atggctttca gattcgagag
      661 cgcctggcgc gcctgcccgg cgaaatcccc tttatgaacc attttaccat gcttatcctg
      721 cgacacttgc ccagagatcc acacgatcgt cccaccggtc gtcttgatgc cctgggcgta
      781 acgaatcggg ctgtagacgg tcggtgcacc aaagacctct ttccgcatga gcagcctcca
      841 gatttgttac atctatgcgc tgttccctca ccccaaccct ctcccagcgg gagagggcag
      901 gcagatgcac ctctgccggc ggaagagagc ggacaggtga acccgcacta gccgtctaac
      961 cgtgcggaga tctcctgacg cacgcgctgc agcattttgc gccggccctg atagtaagcc
     1021 gtgcgctcgg ggagggtgtc ggggatccgc aagcgcgggt cgagaaatgt cagatcgctg
     1081 tcga
//
LOCUS       DASQSL010000139         2322 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_138363, whole genome shotgun sequence.
ACCESSION   DASQSL010000139 DASQSL010000000
VERSION     DASQSL010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2322
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138363"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..577)
                     /locus_tag="VE844_01420"
     CDS             complement(<1..577)
                     /locus_tag="VE844_01420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005224297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HZC00055.1"
                     /translation="MRIVYLIAILIALYGCALFSDKKEETKDVPAPKLYAEAKEALSA
                     ESYTQAIESYEKLQARYPFGTYAQQAQLDLAYAYYKSEEPVSAVAACDYFIKLYPTHP
                     RVDYAYYLKGLANFNQGKGLAERYLPIDASQRDQAAALKSFQDFTELVKRFPKSRYVE
                     DAQQRMTYLRNLLAQHEINVANYYMLRGAYVA"
     gene            638..1612
                     /gene="rluD"
                     /locus_tag="VE844_01425"
     CDS             638..1612
                     /gene="rluD"
                     /locus_tag="VE844_01425"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005373875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HZC00056.1"
                     /translation="MQTQVTMVERYTREAQIPREFAGSRLDQALARIFTDYSRTLLKT
                     WILEGRLLVNNRQPRPRDVVAGGEHVILRVEPEPAIRWQPQALSMDILYQDQDLIVIN
                     KPAGWVVHPGAGNREGTLLNALLHHDPGLAALPRAGIVHRLDKDTSGLLVIARSLRAH
                     TELVKQLQNRTLEREYQALAQGVMVAGGQVNAPLGRHPLHRTRRAVVTRGKEAVTHYR
                     IIHRFRAHTELQLKLETGRTHQIRVHMAYLRHPLVGDPIYGGRLHIPAGASPALAQAL
                     RGFKRQALHASRLRLLHPTTEIALEYSAPLPQDMNTLLKILAQDSNHD"
     gene            1605..>2322
                     /gene="pgeF"
                     /locus_tag="VE844_01430"
     CDS             1605..>2322
                     /gene="pgeF"
                     /locus_tag="VE844_01430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018719183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HZC00057.1"
                     /translation="MTDHAASRLPSRWIYPDWPAPISTHAGTTTRAGGWSRPPYASFN
                     LGAHVGDSVEAVRANRGCLVNRLSLPKEPYWLEQHHGNRVIDPSDPNAGRQADGACTA
                     ATGVVCAILTADCLPLLLCNRAGSRVAALHCGWRGLAGGIISSGLKQMVCLSEDIMAW
                     LGPAISAPVYEVGEEVYAAFAACDPSLTTAFTPTRPGHWLLDLYASTRSILKSQGVHA
                     IYGGHHCTYREPTLFFSHRRD"
BASE COUNT          486 a          706 c          648 g          482 t
ORIGIN      
        1 ccgccacata agccccacgc agcatataat aattcgctac attgatctca tgttgggcga
       61 ggagattgcg caaataggtc atccgttgct gcgcatcctc cacatagcgg ctcttaggaa
      121 agcgtttgac caattcggtg aaatcctgga aggacttgag tgccgccgcc tggtcccgtt
      181 gggaagcatc gataggcagg taacgctcgg ccagtccctt gccctggtta aagttcgcaa
      241 gccccttgag gtagtaggcg taatcgaccc gggggtgcgt cggatataat tttataaaat
      301 aatcacaggc ggccacagcc gatacaggct cctcgctttt gtaataggca taggcaagat
      361 ccaattgcgc ctgctgcgca taggtgccaa acggatagcg cgcctgcaat ttttcatagg
      421 attctatcgc ctgggtatag ctctcggcgc tcaaagcctc tttggcctcc gcatataact
      481 tgggcgcagg cacatccttg gtttcctctt tcttatctga gaatagagca caaccgtaga
      541 gggcgatcag gatagcaatc aaatagacta tacgcatagc tgttaggtga gatagggtag
      601 gttgctttat tctagtgcta tcacgtatga caggacaatg cagacacagg tgacgatggt
      661 tgagagatac acgcgcgaag cccagatccc gcgtgaattt gcgggatctc gactcgacca
      721 ggcactcgcc aggatcttta cagactattc gaggacgctc cttaagacct ggatcctgga
      781 gggcaggctg ctggtcaata accgccagcc aagaccgcgc gatgtagtgg cgggcgggga
      841 acacgtcatc ctccgggtag aaccggaacc cgcgatccgt tggcaaccac aagcactctc
      901 catggatatc ctctaccaag accaggactt gatcgttatc aataagccgg cgggctgggt
      961 ggtgcatccg ggggcgggca accgcgaggg caccctgctc aatgcactgc tccatcatga
     1021 tccgggcctt gcggccctgc cacgcgctgg tatcgtgcac cggctcgata aggatacctc
     1081 cgggctgctg gtaatcgccc gctcgctgcg cgcccatacc gagcttgtca agcaactgca
     1141 gaaccgcacg ctggagcggg aataccaggc cctggcacag ggcgtcatgg tggcaggcgg
     1201 gcaggtaaat gccccgctgg gccggcatcc gctacaccgt acccgcaggg cggtggtcac
     1261 gcggggcaag gaagccgtga cccattatcg cattatccac cgctttcgcg cccataccga
     1321 gctacagctc aaactcgaaa ccggccgcac ccatcagatc cgcgtgcata tggcctatct
     1381 acgtcatcct ttagtcgggg accccatcta cggcgggcgg ctgcacatcc ctgccggggc
     1441 aagtccagca ttggcgcaag ccctgcgggg attcaaacgc caggccctcc acgcctcgcg
     1501 tctgagactg ctccatccca ctaccgagat agccctagag tattccgcgc cattgccgca
     1561 ggacatgaat accttgctta agatcttagc tcaagactca aaccatgact gaccacgcag
     1621 cgtcccgact gccttctcga tggatctatc cggattggcc agcgccgatc tccactcatg
     1681 ccggcaccac cacccgagca gggggatgga gtcggcctcc ttacgcaagc ttcaatctcg
     1741 gggcgcatgt cggcgactca gtcgaggctg tccgtgccaa ccgcggctgc ttggtcaata
     1801 gattatccct gcccaaagag ccctactggc tcgagcaaca ccatggaaac cgcgtgatcg
     1861 atccgagcga tccaaacgcc ggccggcagg cagatggcgc ttgcactgcc gcaacggggg
     1921 tagtctgcgc catcctcacc gctgattgtc ttccgctttt gctctgcaat cgcgccggca
     1981 gccgcgtcgc agccctgcat tgcggctggc gcgggctggc aggggggatt atttcttcag
     2041 gtcttaagca gatggtgtgt ttatcggagg acatcatggc ctggctcggt ccggccatca
     2101 gtgcaccggt gtatgaggtc ggggaagagg tttatgcggc cttcgccgcg tgtgatccgt
     2161 ccttaaccac ggcgttcact ccaacccggc ccggacattg gctgttggat ctttatgcca
     2221 gcacccgctc gatcctcaaa tcgcagggcg tccatgccat ttacggagga caccactgca
     2281 cctatcgcga gcctaccttg tttttctctc accgacgtga tg
//
LOCUS       DASQSL010000140         1991 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_56117, whole genome shotgun sequence.
ACCESSION   DASQSL010000140 DASQSL010000000
VERSION     DASQSL010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1991
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56117"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..258)
                     /locus_tag="VE844_01435"
     CDS             complement(<1..258)
                     /locus_tag="VE844_01435"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HZC00058.1"
                     /translation="MASDYLDKLAEFVTSTRLEDLNNSTIIATKTLVLDTLGAVLAGS
                     QLTENSNLAQLARDLSGQGRATLIGHRGRVQPVFAALVNATA"
     gene            440..1258
                     /locus_tag="VE844_01440"
     CDS             440..1258
                     /locus_tag="VE844_01440"
                     /inference="COORDINATES: protein motif:HMM:NF012995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016407 - acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arylamine N-acetyltransferase"
                     /protein_id="HZC00059.1"
                     /translation="MMTPQLVEQVLQKMGFSAPPGNDLAGLSAIYGRWCHKIPFDNIQ
                     KRLFYSGPAQGPVPGHNSEDFFHKWLAYGTGGTCWANSHAMHDLLEALGIGVVRVAAT
                     MLATPDVVGPTHGTVFAAVDDRRYMVDGSMQTELPVPVEEGDAQEVRHPAQRVHLEHR
                     EGHWYVRWHPAHRPHGLWCRVEMVDVPLEQFNEYHERTRVRSPFNASLYIRLNHPEQT
                     TTIFSGEKVVMKLDGVPSKTPLAGEQLVQVLVEEFGIAEELAVSLPADEPPPHS"
     gene            1514..1969
                     /locus_tag="VE844_01445"
     CDS             1514..1969
                     /locus_tag="VE844_01445"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZC00060.1"
                     /translation="MEASGVSHIAICVRDMDKSLEFYRDVLGMVVEADRMQDTTTGGL
                     PHVYQHPRKTRRQVRLAFAPGAKPTLTMTGHPGEEPDGNPIKLDQIGISHISFTVKDV
                     KALADELVARGVQLAGPLDGFTNDRGEVSSIFVYDPDGILVQFDSGGEG"
BASE COUNT          447 a          528 c          582 g          434 t
ORIGIN      
        1 ggcggtggcg ttgaccagtg cggcgaaaac cggctggact cgacccctat gaccaatcaa
       61 cgtggctcta ccctggccac tcaggtctct agccagttga gctaaattgg agttttccgt
      121 caactggctg cctgctagga ccgcccccag cgtatccagc actaaggttt tggtggctat
      181 aatcgtagag ttgttcaggt cttcgagccg ggtgctagtc acgaattcag ctaatttgtc
      241 cagataatcg ctcgccattc ccgactgcta gccacgctgc gccaatttga atccgcattt
      301 aaatacctac aagccatcgg cccagtgtat gattttcttc cctctgtatc aaccttatga
      361 tagactcccc atattctaga tgtctgggag cgccgctaaa cggtaaggaa gccagtaact
      421 cgcatccata atgcaggtta tgatgactcc tcaattggtg gaacaggtcc tgcaaaagat
      481 gggattcagc gccccgcccg gcaacgatct ggcgggcctg tcagcaattt atggccgatg
      541 gtgccacaag atacccttcg acaacattca aaagcggcta ttctactccg gcccggccca
      601 gggtccggtc cccggccaca attcggaaga cttcttccat aagtggctgg cctatggcac
      661 cggcggcacg tgctgggcca acagccacgc catgcacgat ttgctggaag ccttgggcat
      721 cggtgtggtc agagttgcgg cgacaatgct ggccacccca gacgtggtgg ggccaaccca
      781 tgggaccgtg ttcgctgcgg tggatgatcg ccggtatatg gtggatggct ctatgcagac
      841 cgagctgccg gtaccggttg aggaaggcga cgcccaggaa gtacgccatc cagcccagcg
      901 ggtccatctg gagcatcgag aaggtcattg gtatgtgaga tggcatccgg cgcaccggcc
      961 gcacggtctc tggtgtcggg tggagatggt agatgttccc ctggaacaat tcaatgaata
     1021 ccacgagcgg actcgtgtta gaagcccctt caatgcctca ttgtacatac ggctgaacca
     1081 tccagaacag accactacca ttttctcggg ggaaaaggtg gtgatgaaac tggacggggt
     1141 acccagcaaa acaccgctgg ctggcgagca actggtgcag gtcctggtag aggaatttgg
     1201 tatcgctgag gagcttgccg taagtttacc agccgacgaa ccaccgcctc atagctgaaa
     1261 ttcaagaatt ggatgcagga caagttgcca actctactgt ttttttgcac cgaaaccggg
     1321 aagacctgcg ttagaaagta ggtcagccta tgactggctt tgatgggcgc tgcagtttta
     1381 caaggtaagg ggaaggtctt ccatagggtg ggtggacttg tttagcccct ttgagtaaag
     1441 gtgtctgaag acctccggcg agcatcgctg atacgttaaa ccaagctgac atgagtacag
     1501 aggaggtgag agcatggaag cttccggcgt ttcccacatt gcgatttgcg tccgggatat
     1561 ggataagtcc ctggaattct accgggacgt gttgggaatg gtagttgagg cggaccgaat
     1621 gcaggatacc accaccggcg gcctccccca cgtgtaccag cacccacgga agacccggcg
     1681 gcaggtgcga ttggcctttg cgccgggcgc caagcctacc ctgaccatga ccggccaccc
     1741 aggtgaagaa cccgatggca accccatcaa gctggaccag atcggaatta gccatatctc
     1801 ttttacggtg aaggatgtca aagccctggc cgatgagcta gttgccaggg gagtgcagtt
     1861 ggccggtccg ctggatggtt tcactaatga ccggggcgag gtcagcagca tattcgttta
     1921 tgacccggac gggatcctgg tgcagtttga cagtggcggt gagggctaga gttgagttgg
     1981 cattcctaag g
//
LOCUS       DASQSL010000141         1718 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_1286, whole genome shotgun sequence.
ACCESSION   DASQSL010000141 DASQSL010000000
VERSION     DASQSL010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1286"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..152)
                     /locus_tag="VE844_01450"
     CDS             complement(<1..152)
                     /locus_tag="VE844_01450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001333208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HZC00061.1"
                     /translation="MNSPCIIVTGGAGYIGSHTLIELLNHTGYHIISIDNFSNSSSSS
                     YERVKQL"
     gene            387..1472
                     /locus_tag="VE844_01455"
     CDS             387..1472
                     /locus_tag="VE844_01455"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00062.1"
                     /translation="MDSLPPVLLDFISAFRPLMRAEVFDSFTYLLCGLLIGEAKHGTV
                     RASVFAPAAYQPQRLSDLFCRHKLSRQALMAPLTEQMLTILYPSGLPARLFWLADSTL
                     TEKPFVRRVASVDLFHRAKRIVGRAKHLQGQCYVFAAHLYQTAQRQWASALVGALLYV
                     KGRSIPQLVGSLAQQLRLPALVRQVWVVDRGIASRPLVQSLDRLGQYILGRVRSNQVF
                     YFVPRRQPKRGRPRSYGQKCRVDKLVKRTPSRLQHQTTTLKIRGKERTVRVYDAEMLG
                     RGVWPDRLCPVRLIVVVVAGLRLKPWYLLTTDLALAPVEAVQAYSGRQQIEVNFDEVK
                     ELGLGHYQGRSGEGVRFTNLSTRHFCP"
     gene            complement(1409..>1718)
                     /locus_tag="VE844_01460"
     CDS             complement(1409..>1718)
                     /locus_tag="VE844_01460"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00063.1"
                     /translation="ALVGALLYVKGRSIPQLVGSLAQQLRLPALVRQVWVVDRGIARR
                     PLVQSLDRLGQYILGRVRSNQGFYFVPRRQPKRGRPRSYGQKCRVDKLVKRTPSPLRP
                     "
BASE COUNT          367 a          468 c          505 g          378 t
ORIGIN      
        1 agttgtttta cgcgctcata ggaagaagaa gaggagttcg agaaattatc gatggaaata
       61 atatggtagc cggtatggtt cagaagttcg ataagagtat gggaacctat atacccggcg
      121 cccccagtta caataataca aggagaattc ataggtttaa aaatagataa aatttatgat
      181 tcgggaggaa tattttcgtt cagcaggcgg aagatgagcc gcaaagaatt tttcatattc
      241 aattggaatt ttcatattta attattaagt tgctgtgtca actgtagtcc ccggtttttg
      301 agataaataa gcggcgcaga gatcttgcac tctgcgtctc agtcgttcat cgttgatgta
      361 atcaatcaca acaggagaaa cgactgatgg acagcttacc accggtcctg cttgatttca
      421 tctctgcctt ccgtccgttg atgcgggcag aggtctttga cagtttcact tacttgctct
      481 gcggtctcct aattggcgaa gccaagcacg gcacggtgcg ggcaagcgtc tttgcgcccg
      541 ccgcttatca gccccagcgc ttgtcggatc tattctgccg ccataagctc tcgcggcaag
      601 cgctgatggc tccgttgacc gaacaaatgt tgactatact gtacccgagc ggcttgccgg
      661 cacgcctgtt ttggctggcc gattcgacct tgaccgagaa gccgtttgtc cggcgggtgg
      721 cctcggtgga tctattccac cgtgccaagc gcattgtcgg gcgggccaag cacctgcaag
      781 gccagtgtta cgtctttgcg gcccacttgt accagacggc gcagcggcag tgggccagcg
      841 ccctggtcgg tgcgcttctc tatgtcaaag gacggtccat cccacagttg gtggggagcc
      901 tcgcccagca gttgcgtctg cccgcgctgg tgcggcaggt gtgggtggtc gaccggggca
      961 tcgccagtcg tcccttagtc cagtccttgg accgcctggg ccagtatatc ctgggacggg
     1021 tgcgttcaaa tcaggttttc tacttcgtcc cgcgccgtca acccaagcgg ggccggcctc
     1081 ggagttatgg gcagaagtgc cgcgtggaca aattggtgaa gcgtacgcct tcacggttgc
     1141 agcaccagac caccaccctg aaaatacggg ggaaggagcg caccgtacgt gtttatgacg
     1201 ccgagatgct agggcgcggc gtgtggccag accgcctttg ccccgtgcgc ctgatcgtcg
     1261 tggtcgtagc ggggctgagg ttaaaaccgt ggtatctgct gaccaccgac ctagcactcg
     1321 cccccgtaga ggcggtgcag gcttatagcg gacgccaaca aatcgaagtc aactttgatg
     1381 aggtcaaaga gttgggctta gggcattatc aagggcgcag tggcgaaggc gtacgcttca
     1441 ccaatttgtc cacgcggcac ttctgcccat aactccgagg ccggccccgc ttgggttgac
     1501 ggcgcgggac gaagtagaaa ccctgatttg aacgcacccg tcccaggata tactggccca
     1561 ggcggtccaa ggactggact aagggacgac gggcgatgcc ccggtcgacc acccacacct
     1621 gccgcaccag cgcgggcaga cgcaactgct gggcgaggct ccccaccaac tgtgggatgg
     1681 accgtccttt gacatagaga agcgcaccga ccagggcg
//
LOCUS       DASQSL010000142         1008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_42280, whole genome shotgun sequence.
ACCESSION   DASQSL010000142 DASQSL010000000
VERSION     DASQSL010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42280"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..770)
                     /locus_tag="VE844_01465"
     CDS             complement(<1..770)
                     /locus_tag="VE844_01465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00064.1"
                     /translation="MAFDVYPASHSTPLDVAAAGSSPLIAIKEELIGVDPDTGLNKMF
                     IRAVKLGAGCAPSGPPHPTIRLKADTGDAVDLLPASAVSIFNQPGGTGTEVANAILDV
                     ETDDVYRVRVFIFQPDSNWQIQIVNNDPAAAHGFTWVVSDTDAHTRQPWIDIPTTLEF
                     DVLTGQAATRSLQITNHGTGPLTIADNTGFSPGTGFVLTTVPGAVNPNACADLQITFT
                     APDTPGTTQAVYTITSNDTTAQPTPGHNHQTQLSATTRR"
BASE COUNT          186 a          244 c          365 g          213 t
ORIGIN      
        1 cgacgggtgg tggcggagag ttgggtttgg tggttgtgtc ctggggtggg ttgggcggtt
       61 gtgtcgttgc tggtgatggt gtagacggcc tgggtggtgc cgggtgtgtc gggagcggtg
      121 aaggtgattt gcaggtcggc gcaggcgttg gggttgaccg cgccgggcac ggtggtgagg
      181 acgaagcctg tcccgggtga gaatccggtg ttgtcggcga tcgtcagcgg tccggtgccg
      241 tggttggtga tctgcaggct gcgcgttgcc gcttgtccgg tgaggacgtc gaattcgagt
      301 gtggtgggaa tatcaatcca aggctggcga gtgtgagcgt cagtgtcgct aacaacccag
      361 gtgaagccgt gagcagcggc agggtcgtta ttgacgattt ggatctgcca attgctatca
      421 ggctgaaaga tgaacacgcg gacgcggtac acgtcgtcgg tttcgacgtc aaggatcgcg
      481 ttggcgacct cggtgccggt gccgccgggt tggttgaaga ttgacaccgc gctagcgggc
      541 aaaagatcaa cggcatcacc ggtgtcggct ttaagccgga tcgtgggatg gggcggtccg
      601 gaaggagcgc aaccagcgcc cagcttgaca gcacggatga acatcttatt cagacctgtg
      661 tcgggatcga ctccgatcag ctcctctttg atcgcgatga gaggactgga gcccgcagct
      721 gctacgtcca gaggggtgct gtgtgaggcc ggatacacat caaaagccat cactgctcct
      781 cggtacatag gacaactgag ccgttacaag gatgctccgt gcccggctca ttgcccgttt
      841 gtgagtcctg agcgccatat gcgatagcaa ggactcatca ttgaagcatg ttgatcgtcg
      901 cacagtcggc catgcctgag gacaggaagt tagcttccgg tcgcgggtac gactgcgatc
      961 ccgaacgggg agacaaaaaa gccgccggag gacacctcgg tctgcccg
//
LOCUS       DASQSL010000143         1569 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_124805, whole genome shotgun sequence.
ACCESSION   DASQSL010000143 DASQSL010000000
VERSION     DASQSL010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1569
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124805"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1029)
                     /locus_tag="VE844_01470"
     CDS             complement(<1..1029)
                     /locus_tag="VE844_01470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase"
                     /protein_id="HZC00065.1"
                     /translation="MSTTAALEEPHIVHSLPGRIRVHLPAWDTGAEGWVAYKLRSLPG
                     IGKVNANRLTRNVLVQFDPSITNQEAILNNLANLGTPPAGAQHQVWEIPPVQLERRGE
                     SQRVRIPIPGLDRNPVMAQELEQHLETLPGVRARASALTGRMLVEWANPDITLNDLLA
                     EVSKVDLKLPQQGREAGHPLDRGPLIQGVARLGGATLGLGFLAIRRMLGLSGPPVGSA
                     IPLVIADVVSILRSFSLTRNGLQRLLGRGATDTIFSSAHNLTLAAAGMPLGLALNQAE
                     GLRQTTEAASRGSAWQRYEEAVDGNFTLRPGKVVHAEAGERFPFEAVVREGTGTTIGN
                     DGMPLALVP"
     gene            complement(1043..>1569)
                     /locus_tag="VE844_01475"
     CDS             complement(1043..>1569)
                     /locus_tag="VE844_01475"
                     /inference="COORDINATES: protein motif:HMM:NF025873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HZC00066.1"
                     /translation="EHLNDGAPQEENHVHEKASTVGNNGLQSAQDMSTRQSSKRAEEV
                     LDEFSRRVSGWRLWLTVQAMVLYSRAREELEDIVAEAQQIRHRRNTTDIPRNSTDDLT
                     SPPDIPTGSVDAQPVETVLGIGSTFGHRLKEGGIRTVEDLASAQPEEVARLLGTGEER
                     AIGFIDEARRLRVQ"
BASE COUNT          296 a          480 c          434 g          359 t
ORIGIN      
        1 gggcacaagg gcgagaggca taccgtcgtt gccaatggta gtgccagttc cttcacgtac
       61 cactgcctca aaagggaagc gctctccagc ctcggcatgg accaccttcc ctggcctcaa
      121 ggtgaagttt ccatccactg cttcctcgta gcgttgccaa gcggagcctc ggctggctgc
      181 ctcggtggtt tgccgcagcc cttctgcctg gttgagggcc agtcccagcg gcatgccggc
      241 agcagccaag gttagattgt gcgccgagct gaagatcgtg tccgtagccc cccgacctaa
      301 caggcgctgg agcccattgc gggtcaggga gaagctgcgc aggatgctga caacgtcagc
      361 gataaccagc ggaatagccg aaccgaccgg tggcccagac aaccctagca tcctccggat
      421 tgccaggaaa cctagaccca aggtagcgcc gcccaagcgg gcgactccct gtatcagtgg
      481 cccccgatct agtggatgtc cggcctctct gccttgttga ggcaacttca gatcgacctt
      541 ggagacctca gcaagcagat cattaagtgt tatatcagga ttagcccatt ccaccagcat
      601 ccgcccagtt aatgcgctag cgcgtgcccg cacgcccggt agcgtctcta agtgctgctc
      661 taactcctgc gccatcactg ggttgcggtc caaccccggt attggaatcc tgactcgttg
      721 tgactctccc cgccgttcca gttgcaccgg tggaatttcc cacacctggt gctgtgcacc
      781 tgctggcggc gttccaaggt ttgccagatt attcagaatc gcttcctggt tggtaatgga
      841 tgggtcaaat tggaccagga cattgcgggt gagccggttg gcattcacct taccgatgcc
      901 gggtagactc cgcagtttgt acgcaaccca tccttccgct ccggtgtccc acgctggtag
      961 gtgtacccgg attcttccag ggagagaatg gactatgtgg ggctcttcaa gggcggcagt
     1021 ggtgctcact gatctgaatc ctctactgga cccgcagcct tcgggcttca tcaatgaagc
     1081 cgatggcccg ctcctctcca gtccccaaca gccgggccac ctcctccggc tgggccgagg
     1141 ccaggtcttc taccgttctg atgccgccct ctttcagtcg gtggccgaag gttgacccaa
     1201 tgcctaacac ggtctcgacc ggctgggcat cgacagaacc cgtcgggata tcgggaggac
     1261 tcgtgaggtc gtcggtagaa ttcctgggga tgtcagtggt gtttcttcta tgccgaattt
     1321 gctgcgcttc cgcgacgata tcttctagct cttcacgggc tcgggaatac aagaccattg
     1381 cctgcacagt tagccatagt ctccagccac taactcgacg agaaaactca tcgaggactt
     1441 cctcagcacg cttagagctt tgtcgagttg acatgtcctg cgccgattgc aacccattgt
     1501 taccaacggt cgaggctttt tcatggacat ggttttcttc ttggggagct ccgtcgttca
     1561 agtgttctt
//
LOCUS       DASQSL010000144         1149 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_69770, whole genome shotgun sequence.
ACCESSION   DASQSL010000144 DASQSL010000000
VERSION     DASQSL010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69770"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..297
                     /locus_tag="VE844_01480"
     CDS             <1..297
                     /locus_tag="VE844_01480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00067.1"
                     /translation="LHEILLTSCSRCPTFPPPPQANSKLQTLSMETDCAGHTQRDTAT
                     DNPANQAADSHPEINNPSQMIMPTERLLLMCPEINTVGIRNAEKLCPIRGRFPC"
     gene            complement(804..965)
                     /locus_tag="VE844_01485"
     CDS             complement(804..965)
                     /locus_tag="VE844_01485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00068.1"
                     /translation="MRRIGVYPVGGQYASVQGVAAGVLGELGAHADTQHPFGPADVMW
                     SRSYGDISP"
BASE COUNT          263 a          370 c          313 g          203 t
ORIGIN      
        1 ctccacgaga tcttactgac atcgtgcagc cgatgcccaa ccttcccacc gccgccacag
       61 gccaacagca agctacaaac cctaagcatg gaaaccgact gcgctggcca cacccaacgc
      121 gacaccgcca ccgacaatcc cgctaaccaa gccgctgact cccatcccga gatcaacaac
      181 ccatcccaga tgatcatgcc aacggagcga ctcttgttga tgtgtccgga gatcaacacc
      241 gtaggaatcc ggaatgccga gaagctgtgc ccgatacgtg gacgcttccc ttgctgataa
      301 gcgaacgcac gaccgatcag cgttcacagg agtgctcccg gggatctccg tccccttgga
      361 catctcggat cgtcctcgct gggcggaacg agctcatgta cgcgacacgc tgacctgtgc
      421 cggtcaatca caagctcgga tcgggaatga tctagcgcga gaggattccc aacctcacga
      481 cgtaccgcaa ttagcatgtt ctccgcatgg atacgaaagg tacacattga caacgcaccc
      541 atgaacagcc gggtaagctc agcagcacgg tgcaattacg ccacatcgtg tggcaccaat
      601 tggcagcgag ttgctcggtt ataccgcagc accgccgcga ccgtcggcat cgaccgtaat
      661 tgcgcccgca atcgcagcgg cacgtgcata tgactaggga tgaagtggta cctaggcggt
      721 tgcgtggggg tgttggtcca gaatgattag gggtagtcgg gcatcggcgg ttgtcaacag
      781 caggggatta gcgcacactg ggactacggt gagatatccc catacgaccg gctccacatg
      841 acgtcagccg gtccgaacgg gtgttgggtg tctgcatggg cgcccagttc gccgagtacg
      901 ccagcggcta ccccctggac gctggcgtac tggccgccga ccggatagac cccaatcctc
      961 ctcatacccg gtcggcggtc cttattacac ggcccatccg ggccggaagc aggctgtcac
     1021 caccgacaat acggctcccg gtacttgggg agaaatacct tgtcaggcaa ccctgacaag
     1081 ccagacccga tcaaatcggc ctcgcacggt gagcacctcc tgatcggtaa caaaccttct
     1141 gagcgttgt
//
LOCUS       DASQSL010000145         1313 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_152208, whole genome shotgun sequence.
ACCESSION   DASQSL010000145 DASQSL010000000
VERSION     DASQSL010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1313
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152208"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1264)
                     /gene="glgP"
                     /locus_tag="VE844_01490"
     CDS             complement(<1..1264)
                     /gene="glgP"
                     /locus_tag="VE844_01490"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002683725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004645 - 1,4-alpha-oligoglucan
                     phosphorylase activity [Evidence IEA];
                     GO_process: GO:0005977 - glycogen metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan family
                     phosphorylase"
                     /protein_id="HZC00069.1"
                     /translation="MAIALTVRDWMVDSLLATEERYQKADAKRLYYLSMEYLIGRSLA
                     NNLSNLGLLEQCRESLMELGVDLEEVRESESDAALGNGGLGRLAACFLDSLATLDMPG
                     YGYGINYEYGLFKQEIDAGYQKEKPDNWLAHGTPWQIERPDEACLIPVYGRIEPTSGR
                     AGRTKSQWTDAQILIGIPYDLPIVGYEGRTTNLLRLYSARSSHEFDMQIFNQGDYLKA
                     VELKIATEIISKVLYPSDSVKAGRELRLVQEYFLVSCALRDIIRRYTANHSSFDDFPA
                     KVAIQLNDTHPALAVAELMRMLIDEQDLPWKSAWEITQATMGYTNHTLLPEAMEKWPV
                     SLLEYVLPRHMQIIYDINHQFLQHVSTVWPGDLARLQRMSLIEEGEQKQVRMAHLAIV
                     GSHSVNGVAALHTKLVQTALVPDFYQLWP"
BASE COUNT          285 a          379 c          352 g          297 t
ORIGIN      
        1 cgggccacag ctgatagaaa tccggtacca gcgcggtttg caccaacttg gtatgtaagg
       61 ccgcaacgcc gttgacggaa tggctcccga cgatggcgag gtgcgccatg cgcacttgct
      121 tttgctctcc ctcttcgatc aacgacatgc gctgcagtcg cgccaggtct cccggccaga
      181 cggtcgagac atgctgcagg aactgatggt tgatatcgta gatgatctgc atatgccgcg
      241 gcaggacgta ctcaagcagg gagaccggcc acttctccat cgcttccggc agcagggtgt
      301 gattggtata ccccatcgtc gcctgtgtga tctcccaggc gcttttccac ggtaaatcct
      361 gttcatcgat cagcatacgc atcaattcgg ccacggccaa ggctgggtgg gtatcattga
      421 gctggatggc cactttcgca gggaaatcat cgaaactgct gtgattggcc gtgtaccgtc
      481 ggatgatatc ccgcaacgca cagctcacca gaaaatactc ttgcaccaga cgaagctcgc
      541 gaccggcttt gacggaatcg gaggggtaca gaaccttgga aatgatctcg gtggcgattt
      601 tcagctcaac cgctttcagg taatctcctt ggttgaagat ttgcatatca aattcgtgcg
      661 aagacctcgc cgaatagagt cgcaggagat tagtcgtccg cccttcatag ccgacgattg
      721 gcagatcata cgggatgccg atcaaaatct gtgcatccgt ccactgtgat ttcgtccgac
      781 cggctcgccc agaggtcggt tcaatgcgcc catagaccgg gatgagacag gcctcatcag
      841 ggcgctcgat ctgccagggc gtgccatggg cgagccaatt gtcgggcttt tctttctggt
      901 accctgcatc gatctcttgc ttgaagagtc cgtattcgta gttgattcca tagccatatc
      961 ccggcatgtc aagcgtcgcc agcgaatcga gaaaacaggc cgccaaccga ccgagacccc
     1021 cattgcctaa ggccgcatcc gattcgctct cgcgcacttc ttcgagatcg acccctagct
     1081 ccatcagcga ttcgcggcac tgttcgagaa gcccgaggtt tgacagatta ttggcgagtg
     1141 accggccgat gaggtactcc atcgagagat agtacagacg cttcgcatcg gctttttgat
     1201 agcgctcctc cgtggccaat agactgtcta ccatccagtc gcgcaccgtc aatgcgatcg
     1261 ccataaacag gtcatgactg gaaagctttt cccatcgctt gcccagggaa tat
//
LOCUS       DASQSL010000146         1314 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_179663, whole genome shotgun sequence.
ACCESSION   DASQSL010000146 DASQSL010000000
VERSION     DASQSL010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1314
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179663"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(374..793)
                     /locus_tag="VE844_01495"
     CDS             complement(374..793)
                     /locus_tag="VE844_01495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012646245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HZC00070.1"
                     /translation="MMERFLGPYSPYLYAVMRVVVGFLFACHGAQKLFGVLGGVGSQP
                     GASVPLFSLMGLAGIIEFFGGLLIAVGWLAGYAAFIASGEMAVAYFMNHFPRGFWPIM
                     NRGELAVLYCFVFLYIASRGAGIWSLASAFDKSRVSR"
BASE COUNT          335 a          360 c          356 g          263 t
ORIGIN      
        1 taaacaggaa gaaaattcct ccacctgggt ctcaaactcc cccgcaataa tagtctcatc
       61 aataagtcgc ataaaacctt cgtttggtga gacaagagac gagaggtgtt gcaaaaaccg
      121 ggtttatgag acgataaaat agggcggtgt tttgacgggc gagagctctt tactgatgat
      181 tcaagattat cgccgtagta gaggacattc acgccccact tctcgcggca tggaggcgtg
      241 aagcaagaaa ttatgcaatt cccgaaaacg ggagcgctgt gaaagcactt gtgctgtggc
      301 ggtccttcca ggcaacgcgc gtcgggagcc tgaatcgggt ctatgctggc agaccatcgc
      361 gatggatccc gcttcatcgg ctcacacgcg atttatcgaa agcgctggcg aggctccaga
      421 tccccgcccc cctcgaggcg atatagagaa acacgaagca gtagagcaca gccagctcgc
      481 cgcggttcat gatcggccag aagccgcggg ggaaatggtt catgaagtag gccacggcca
      541 tttcgccgct cgcgataaag gccgcatagc ccgccagcca gcccaccgca atgagcagtc
      601 cgccgaagaa ctcgatgatc cccgccaagc ccatgaggga gaatagcggc acgctcgcgc
      661 cgggctgcga ccccacgcca cccaacacgc cgaaaagctt ttgcgcacca tggcaggcga
      721 acaagaaacc gacgacgacc cgcatcaccg cataaaggta gggggagtat ggcccgagaa
      781 accgctccat cattacctcc tttatgattt cttatccgca atttcccata tcaaactgct
      841 tataccttaa atgggcatct atctgtgctg agcatgtact ttcacccatg aggtgcttcc
      901 ctctttccca tcggacggtt gctcatagcc atctatggcg gtaaaggcgt caagggtgat
      961 aaggagcctg atgagacggc gcatcatggg agcctcctgc gttcacggac gtgtgggggc
     1021 attctacgca ctatgtgccg gggaggggaa tcaaattttg caacattaca cgtccacatc
     1081 cgcggagaag atctgcggac actccatgcg gatacaccag tatcttcgaa aggggctgct
     1141 tttgaagggg gtagtggtgt gtctcggaaa acggtcgatt acggtaccgc ctatgtagat
     1201 tcacatgtga ctacatgagg acaccctgtg gtcatgatta aagaatacgt ggaaaactcc
     1261 gcaacactcg ccgtacgcgc gcgacagcta gccctgcagc aggttaacgt agaa
//
LOCUS       DASQSL010000147         1054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_124839, whole genome shotgun sequence.
ACCESSION   DASQSL010000147 DASQSL010000000
VERSION     DASQSL010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124839"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(23..472)
                     /locus_tag="VE844_01500"
     CDS             complement(23..472)
                     /locus_tag="VE844_01500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011565738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4870 domain-containing protein"
                     /protein_id="HZC00071.1"
                     /translation="MQQEDPNYARHQEEHRLNRIPVSMSAQDERRWSAIAHLSILLNL
                     ISAIGGPVAALVIWLVYKDRSRVVAFHALQSLWYQVAWIVILSVGWSITYILMFVLIG
                     FVLVPVMAIASIVPFVHQCYAAYKISQGVDYRYPIIADRVDGERRVA"
     gene            complement(555..>1054)
                     /locus_tag="VE844_01505"
     CDS             complement(555..>1054)
                     /locus_tag="VE844_01505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011563563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00072.1"
                     /translation="HPRQLGQSPGFAGATWVRWGSFSVYGVKLHLLCSTNRVPLSYEL
                     TAANVAEVRLTKELLEGANLGQDLARKLCGDLAYRSEALEKDLAGTGVLLVTERSRQN
                     GKRQQIEIALASLKRVFRLGETLATTLVGLVTRIAAKICAYTFAFLVNRRLERPQGRI
                     KDLWA"
BASE COUNT          208 a          332 c          287 g          227 t
ORIGIN      
        1 tcctgcgcta tcgcgtttct tgctaggcga ccctccgctc accatcgacc ctgtcggcaa
       61 tgatcggata ccggtagtcg acgccctggc taattttata ggcggcatag cactgatgta
      121 cgaaggggac gatagaggcg atagccatca ctggcaccag cacgaagccg ataaggacga
      181 acatgaggat gtaggtgatg gaccacccta cgctgaggat cacgatccaa gccacctggt
      241 accagagcga ctgcagagcg tggaaggcta ccacccggga cctatccttg taaaccagcc
      301 agatgacgag ggccgcgact gggcctccga tggcgcttat taagttcagc aggatactta
      361 aatgcgcaat tgctgaccac ctacgctcgt cctgggcgct catgctcacc ggaatgcggt
      421 tgaggcgatg ctcctcctgg tgcctggcgt agttcgggtc ttcttgttgc atgctcgctc
      481 cttttgcctt ctagttcaca aacatggtct gtgccccgtg gcatctagtg ccctagatga
      541 gtattgtggg gatctcacgc ccataaatct ttgatccgcc cttgcggcct ctctaggcgg
      601 cggttgacca agaaggcgaa ggtatacgcg cagatcttcg ccgctatcct agtgaccagg
      661 cccaccagcg tcgtcgccag cgtctccccg agccgaaaga ccctttttaa gcttgctagg
      721 gcgatctcga tctgctgcct cttgccattc tgccgggaac gctctgtcac cagcagcacc
      781 ccggttcctg caaggtcctt ctccagcgcc tcactccggt atgccagatc cccgcagagc
      841 ttgcgtgcta agtcctgtcc tagattcgcc ccttcgagta gttcctttgt cagacgcacc
      901 tcggcaacgt tggcggcggt cagctcgtag gagagcggca cccggttagt ggagcagagc
      961 aggtgcagct tcacaccgta tactgagaac gagccccacc tcacccaggt cgcccccgca
     1021 aagcctggcg actgccccaa ctgcctaggg tgca
//
LOCUS       DASQSL010000148         1978 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_56184, whole genome shotgun sequence.
ACCESSION   DASQSL010000148 DASQSL010000000
VERSION     DASQSL010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1978)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1978)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1978
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56184"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            178..1554
                     /locus_tag="VE844_01510"
     CDS             178..1554
                     /locus_tag="VE844_01510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013334790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC00073.1"
                     /translation="MLGEVFERFVEKSPISVMVRASLERVLGADRLDLWYDRTAQKQY
                     TRDLLFSSVYDMMNQVVFCVQPSVRAAYQAQQDDVGTSLVSVYNKLNNLETHTAAELV
                     RYSAREFAPLITHMGGARTPWLEGYRIKIVDGNCLEASEHRIQELRDAQGRALPGKSL
                     VVYKPAQGLVTDVFPCENGHAQERSLFGPLLKTVEAGDLWIEDRNFCTRDFLCDIDNR
                     GAFFITREHLGLNFKILGALRSCGRTATGEVAQQRVQVVDQQGQAHVFRRVRIKLNQP
                     TRDGATIVHILTNLPRQISGKRVADLYRKRWTLETAFQHLEAYFHSEINTLGYPKAAL
                     FGFCLALVAYNLLAVVLAALRGVHGEETVDEEVSLYYVANEISTTYHGMMIAIPAPEW
                     DVFYSMSPADLAAMLLELARKVRLQAIRKSSRRPKTPRPPGKKPARKGHVATAKLLMN
                     RQAKSATP"
     gene            complement(1511..>1978)
                     /locus_tag="VE844_01515"
     CDS             complement(1511..>1978)
                     /locus_tag="VE844_01515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012586206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00074.1"
                     /translation="TLSESGGKYILCMPMRRGDEVTTEVLQRPGRFQTVSENLRVKEV
                     IVGEGERRRRYVVCHNPQEEKRQRAHRRQVLYELEAELASLKEVRGESHSKRVCQLRA
                     SRRYGRYLRLTKGGLLRMDAAKRRAAEQLDGKFVVHSSGVKVWPILLDDSSAI"
BASE COUNT          419 a          549 c          548 g          462 t
ORIGIN      
        1 catagaggaa attaggaagc cctcgttttg gccggtgatg acgcatccag gtcgacatat
       61 ccgtgtatct ttccatgtac ctatccaatt cggttaggta catatggcag cggtgtaaag
      121 gtggggcgat tttgtgtagg atagggcttc ttcaatattg cgaataagga ggcccccatg
      181 ctcggtgaag tgtttgaacg attcgttgaa aaaagcccca tctccgttat ggtccgcgct
      241 tcacttgagc gggttttggg cgctgatcga ctcgatctgt ggtacgatcg caccgcacag
      301 aagcaataca cccgagacct cttgttttcc agtgtctatg acatgatgaa ccaagtcgtc
      361 ttttgcgtac aaccctcggt gcgggctgcc taccaggctc aacaagacga cgtgggcact
      421 tccctcgtgt cggtctataa caaactcaat aacctggaga cgcatacggc ggcagaactc
      481 gtgcgttata gtgctcgtga gtttgccccg ctgatcacgc atatgggcgg tgcgcgaacg
      541 ccttggcttg agggctatcg gatcaaaatt gtcgatggca actgcctcga agccagtgag
      601 caccgcatcc aggagctacg cgatgctcag gggcgggctt tgcccggcaa atccttggtg
      661 gtctataagc ctgcccaggg cttggtgacc gatgtctttc cctgtgaaaa tggccatgcg
      721 caggaacgct cattgttcgg gccgcttttg aagacggtgg aagccggcga tctgtggatc
      781 gaagaccgca atttttgtac gcgagacttt ctgtgcgaca tcgacaaccg gggtgccttc
      841 ttcatcaccc gcgaacatct ggggctcaat tttaaaatat taggggctct acgctcgtgt
      901 ggccgcacgg cgacgggcga agtggcccaa caacgtgtcc aagtggtgga tcagcaaggc
      961 caggcgcatg tctttcggcg cgtgcggatc aagttgaatc aaccgacccg agacggggcc
     1021 accattgtcc atatcctgac caatttacct cgccagatat cgggcaaacg ggtagctgac
     1081 ctctaccgca aacgctggac tctggaaacc gccttccaac atctcgaagc gtattttcat
     1141 tctgagatca atacgttggg ctaccccaag gcggcgttat tcgggttttg tctggccctg
     1201 gtggcctaca acttactggc ggtggtgttg gcggcgttgc gtggggttca tggcgaagag
     1261 accgtggatg aagaggtctc gttgtactat gttgccaacg aaatttcgac gacctatcac
     1321 ggtatgatga tcgcgattcc ggctccggag tgggacgtgt tttattcgat gagtccggcg
     1381 gacctggctg ctatgttgct cgaactggcc cggaaagtac gtcttcaagc gattcgaaaa
     1441 agttctcgga ggcctaaaac acctcgtcct ccgggtaaaa agccggcccg gaagggacac
     1501 gttgcaacag ctaaattgct gatgaatcgt caagcaaaat cggccacacc ttaacaccgc
     1561 tgctatgcac cacgaatttg ccatcgagct gttcagcagc gcgtcgtttg gccgcgtcca
     1621 tccgcagcaa cccccctttg gtcaggcgca gatagcgacc atagcggcgg ctggcccgaa
     1681 gctgacacac ccgcttgctg tggctctcgc cccgcacttc ttttaaagaa gccagttcgg
     1741 cttccagttc atagagaacc tgacggcggt gagcccgttg acgcttttcc tcctggggat
     1801 tgtggcacac cacataacga cggcgacgtt ccccctcacc cacgatcact tctttcacgc
     1861 gcaggttctc cgataccgtc tgaaaacgac ccggtcgctg gaggacctcg gtggtcactt
     1921 catcgccccg gcgcatcggc atgcataaga tgtatttgcc cccgctctcg ctcagcgt
//
LOCUS       DASQSL010000149         1352 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_15133, whole genome shotgun sequence.
ACCESSION   DASQSL010000149 DASQSL010000000
VERSION     DASQSL010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1352
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15133"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(229..504)
                     /locus_tag="VE844_01520"
     CDS             complement(229..504)
                     /locus_tag="VE844_01520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00075.1"
                     /translation="MVAERGSDDEVTLYVSWNGATEVATWEVLAGPEPDQIKPIGSVP
                     RHGFETAITVGTAERYVGVQAKDSLGRVLGTSKATRAIYVRSQHRRL"
     gene            complement(482..1108)
                     /locus_tag="VE844_01525"
     CDS             complement(482..1108)
                     /locus_tag="VE844_01525"
                     /inference="COORDINATES: protein motif:HMM:NF025627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylsulfotransferase family protein"
                     /protein_id="HZC00076.1"
                     /translation="MAQPGTRRPRRVLQGFAGGGGETFDYFHINSIEVDHDSNLLVSS
                     ARNTFTVYKIDRSSGELIWRLGGKKSNFEMDAGTRTRYQHDARRHSDGTISIFDNGGV
                     FKDDISCGLIKILDMDEMTAILVRKHAQPQGRVSATKGNMQVLLNGNAFIGWGSTPLF
                     SELISDGELLFNASFPPKSNSTGSTGRSVSHGAGSPATIQPHGSRARL"
     gene            complement(1012..>1352)
                     /locus_tag="VE844_01530"
     CDS             complement(1012..>1352)
                     /locus_tag="VE844_01530"
                     /inference="COORDINATES: protein motif:HMM:NF025627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="arylsulfotransferase family protein"
                     /protein_id="HZC00077.1"
                     /translation="GPAEYGILDSSYQETKRVRAGNGYEGDDHEFLITPQGSALFTIY
                     TRVNNFDLSSVGGSKEGRVRAGIVQEVDIETGDVLFEWHSLEHVGLDESYRALPEEAG
                     RPLTTSTSIP"
BASE COUNT          276 a          376 c          393 g          307 t
ORIGIN      
        1 cgccgaagca cctagagaaa ttgtctggaa attcggatag tccccccaac caggctctgc
       61 tagtcgatac aaggggtcaa gaagcgctat tttcggacac tgtgcaccat ctttgaccac
      121 agtcgagaag ccccctttgg ctattttccc ggcaggctct ctaggacgtt cgtgaataag
      181 ggtaagaaca aggaccgagg ttctcgaagg tgccccaaga tgcggagcct atagtcgtcg
      241 atgctgtgaa cgtacgtata tagccctggt ggctttggag gtgccgagca ctcgacccaa
      301 actgtccttg gcctgcacgc cgacgtagcg ctcagcggtg ccaactgtga ttgcggtctc
      361 gaagccgtgc cgggggacag atccgatggg tttgatctga tcaggctcag gcccggctag
      421 cacctcccag gtggcaacct ccgtggcccc gttccagcta acgtagagcg ttacctcatc
      481 atcagagccg cgctcggcta ccatgtggtt ggatcgtcgc tgggctgccc gctccatggg
      541 aaacggaacg ccctgtagac cctgtagaat tcgacttcgg ggggaagctg gcgttgaaga
      601 gcagctcgcc atcgctgatg agctcggaga agagaggagt gctgccccaa cctatgaatg
      661 cgttgccatt gagcagcacc tgcatgttgc ccttggtggc ggagactcgc ccttggggct
      721 gggcatgctt gcgcaccagg atagcggtca tctcgtccat atccagaatt tttatcagcc
      781 cacaagatat gtcgtctttg aacacgccac cgttatcgaa gatggagatg gtgccatcgg
      841 agtggcgcct ggcgtcgtgt tggtagcggg ttcgggtgcc agcatccatc tcgaagttgc
      901 tcttcttgcc tccgagcctc catatgagct caccgctact gcggtcgatc ttgtagacgg
      961 taaaggtatt gcgggcggag gagacgagca ggttggagtc gtgatctacc tctatggaat
     1021 tgatgtggaa gtagtcaaag gtctccccgc ctcctccggc aaagccctgt aagactcgtc
     1081 gaggccgacg tgttccaggc tgtgccactc gaagaggaca tcgccggtct cgatgtctac
     1141 ctcctggacg atccctgcgc ggaccctacc ctccttagag ccaccaacag aggagagatc
     1201 aaagttgttc accctggtat agatcgtaaa gagcgcactg ccttgagggg tgatgagaaa
     1261 ttcgtggtcg tccccttcat acccgttacc tgcacgtact ctttttgtct cttggtagga
     1321 gctatctagg atgccgtact cggcgggacc tt
//
LOCUS       DASQSL010000150         1138 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_165527, whole genome shotgun sequence.
ACCESSION   DASQSL010000150 DASQSL010000000
VERSION     DASQSL010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1138
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165527"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..625
                     /locus_tag="VE844_01535"
     CDS             <1..625
                     /locus_tag="VE844_01535"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HZC00078.1"
                     /translation="QDKLERYVRVVNGLQPDIVALTGDFIGSSPHFIPACAAALEKIE
                     AREGVFACLGNHDYWVGAHSVADALERAGVRVLRNEAQTLTLKGAVLNIAGVDDPWRG
                     KPDFDRALSMIDANVPTIMLCHQPDLFPASAQRAVDLMLSGHYHGGQVKLQFMGMKLS
                     PAHLISGFVDGHYRQGPSQLYVSRGIGITGPPVRLNAPPEITLLHLA"
     gene            complement(940..>1138)
                     /locus_tag="VE844_01540"
     CDS             complement(940..>1138)
                     /locus_tag="VE844_01540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00079.1"
                     /translation="VLRVLGVPSRQSVIQDREAWVYDYSLEENWVLFLGLYSEKRKTI
                     QQRGVAVLFTNDRLYDYWFME"
BASE COUNT          256 a          328 c          315 g          239 t
ORIGIN      
        1 acaggacaaa ttagaacggt atgtccgcgt ggtgaacggc ttgcaaccgg acatcgtcgc
       61 tctgactggg gatttcatcg gctcttcgcc ccatttcatc cccgcctgtg cggctgcgct
      121 ggagaagatc gaggcccgag agggggtgtt cgcctgcttg ggcaaccatg attattgggt
      181 cggcgcgcat agcgtcgctg atgccttaga gagagcaggg gtgcgggtcc tgcggaatga
      241 ggcgcaaacc ctcacactga aaggggcagt gctcaatatc gcaggagttg atgatccgtg
      301 gcgcggtaag ccagacttcg accgggctct gtcaatgatc gatgccaatg tcccgaccat
      361 tatgctctgc caccagccgg accttttccc ggcgagcgcc cagcgggcag tcgatcttat
      421 gctttcaggg cactatcacg gcggtcaagt gaaactgcaa ttcatgggca tgaagttgtc
      481 gcccgcccac cttatctctg ggttcgttga cggccattac cgtcaaggtc cctcgcagtt
      541 gtacgttagt cgtggcatcg gtatcaccgg tccgccggtg cgactcaacg ccccacccga
      601 aatcacctta ttacacctag catagctctt gatggcagca ggcgagtcca tctgcttgcg
      661 atgggacctc cagacgctaa tgctcggtct agacctaaca ctcaacgtcg taagcaccat
      721 cacgccggga atcggtaccc cacctcgata cacacctgaa gtacatgcga tcgcggcatt
      781 tgtggtgcca acctggtaac atagcatatc gcatcgtccc gaatccggcg tatgggtttt
      841 ctaagcgcat cctgtcctca cgcatggagg gaggcaggaa ggcatcgggg caggggcggc
      901 gctggcagaa aggagacggg aagcctaaaa cgctaaggtt cactccatga accaataatc
      961 gtagaggcga tcattcgtaa agaggacagc gacaccgcgt tgttggatgg tcttgcgctt
     1021 ttccgaatac aatcccaaga acaacaccca attttcttct agactataat cgtacaccca
     1081 cgcctcacga tcctgaatga ccgattgccg gctagggacg ccgaggaccc gtaacaca
//
LOCUS       DASQSL010000151         2162 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_83135, whole genome shotgun sequence.
ACCESSION   DASQSL010000151 DASQSL010000000
VERSION     DASQSL010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2162
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83135"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            184..>2162
                     /locus_tag="VE844_01545"
     CDS             184..>2162
                     /locus_tag="VE844_01545"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HZC00080.1"
                     /translation="MTDTQDHGSLFEPMSYKLPETVRPERYEMRLTPDLNAFTFAGEE
                     TVAVTVREPVNEIVLNAVELTIHTAAIISSEGETLPGIATLDEPNERAVLRFPERLKP
                     GPWKLYLTFSGILNDKLHGFYRSTYQDPSGRDRILACTQFESTDARRAFPCWDEPALK
                     AVFQTTLVIDQGLTALSNTQVVRETALPGTGKKEVGFADTIKMSTYLVAFIVGELEGT
                     EPVFIDGKPLRVWAVPGKAQLARFAQAIGAASLSYFSSYYGREYPGDKLDLIAIPDFA
                     SGAMENLGAITFRETALLVDENTAALSELERVADVVAHENAHMWFGDLVTMRWWNGLW
                     LNEAFATFMEMLAVDQWKPEWQRWTSFAVSRAAALLVDGLKSTRAIEYPVRLPEEAAG
                     MFDVLTYEKGAAILRMLEQYLGPEAFRQGISLYLKKHEYDNAETTDLWDAIEGSSGQP
                     VRRLMDSWVFQPGYPLISVRAEGSDIVLSQQIFRYLSDTAEGRWHVPIFLRVKTSQGV
                     HTQIDLLTGDELCITLPAQPEWVVVNAGGHGFYRVRYMPDLLNQLITDLQENLSAVER
                     FNLVNNTWAAVLAGITPLTAYLEFLNHFRDENDRNVWTAILGTLHYLERMLDAPECTG
                     LEALVRNLLRPATERLGWDPVAGEHELVSQLRGELL"
BASE COUNT          440 a          610 c          632 g          480 t
ORIGIN      
        1 aggcctgtga gtggatccta aggatctgtg aaaagataag ttgagcattt tttactcagt
       61 gttatgatcc cagtatggta gatgctgaga ctgtgcttta ggtgcgcacc cagcaacttg
      121 tggtattact tccagtaaag cttcatcgca tagtggtgat ctacattacc ccgaggagtc
      181 gttatgaccg atactcaaga tcacggatct ttgtttgaac ccatgtctta taagcttccc
      241 gaaacagtgc gtcccgaacg ttatgagatg cgtctcaccc ccgatctcaa cgcattcacg
      301 tttgctggtg aggagaccgt agcggtcacg gtacgtgagc ccgtgaacga gatcgtgctg
      361 aacgcagtcg agcttacgat tcatacagcg gcgatcatct cttccgaggg cgaaacactg
      421 ccgggcatcg ctaccttgga tgagcccaat gagcgggcgg tgctgcgttt ccccgagcgg
      481 ctcaagcccg gtccttggaa actgtacctc accttttccg ggatcctcaa tgacaagctc
      541 cacgggttct accgcagtac ctatcaggac ccaagcggtc gcgaccggat cctcgcctgc
      601 acccagtttg agtctaccga cgcccggcgt gcatttccgt gctgggatga acccgcgctc
      661 aaggctgtgt tccagacgac gctggtgatc gatcaaggac tgaccgccct ctcaaatacc
      721 caggttgtcc gcgagacggc tctgccaggc accggcaaaa aggaggtggg cttcgccgat
      781 accatcaaga tgtcgactta tctggtcgcc tttatcgtcg gggaattgga gggcactgag
      841 ccggtcttca tcgatgggaa acccttgcgt gtctgggctg tgccgggtaa agctcagctc
      901 gcgagattcg cccaagcgat cggcgccgcc tccctatcct attttagtag ctattacgga
      961 cgcgagtacc ccggcgataa gttggatctg attgccatcc cggattttgc ctctggcgcc
     1021 atggagaacc ttggggccat tacctttcgc gagaccgccc tcctggtgga tgaaaacact
     1081 gccgccctca gtgagcttga gcgcgtggcc gatgtggtgg cccacgagaa tgctcacatg
     1141 tggtttggcg atctggtgac catgcgctgg tggaatgggc tatggctgaa cgaggcgttt
     1201 gccaccttca tggagatgct cgcggtcgat cagtggaagc ccgaatggca gcgctggacg
     1261 agcttcgccg tgtcgcgcgc agcggcgctg ctggtcgatg gacttaagag cacacgcgcg
     1321 atcgaatacc cggtgcggtt accggaggaa gccgccggca tgttcgacgt cctgacctac
     1381 gagaagggtg cagccatctt gcgcatgctg gagcaatatc tcggccccga agcattccgc
     1441 caggggatca gcctgtatct caagaagcat gaatatgaca acgctgagac cacggatctg
     1501 tgggatgcga tcgaggggtc ttcgggacag ccggtacgcc gcttgatgga ttcctgggtg
     1561 tttcagcccg gttatccttt gatttcggtg cgtgcggaag ggagcgatat tgtcctctca
     1621 caacagatct tccgctatct gtcggacacg gcggagggcc gctggcatgt cccgatcttt
     1681 ctcagggtga aaacctccca gggcgttcac acgcaaatcg acttgctgac cggtgacgag
     1741 ctatgcatca ccttgccggc ccaaccggag tgggtggtgg tgaacgccgg cggacacggt
     1801 ttctatcggg tccgctatat gccggatttg ctgaatcaat tgataacgga tctacaagaa
     1861 aacctctcgg cggtggagcg gttcaacctg gtgaacaaca cctgggcggc agtgctcgcc
     1921 ggaatcacac cacttaccgc ctatctcgag tttttgaatc acttccggga cgagaacgac
     1981 cgcaacgtct ggaccgccat cctcggcact ttacattacc tcgagaggat gctcgatgcg
     2041 ccagagtgca caggcttaga agcgcttgtt cggaacctgc tgcgtcccgc caccgaacgg
     2101 ctcgggtggg atcccgtagc cggcgagcat gagctcgtca gtcaactgcg cggcgagctc
     2161 ct
//
LOCUS       DASQSL010000152         1677 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_42381, whole genome shotgun sequence.
ACCESSION   DASQSL010000152 DASQSL010000000
VERSION     DASQSL010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1677
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42381"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..279)
                     /locus_tag="VE844_01550"
     CDS             complement(<1..279)
                     /locus_tag="VE844_01550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin Dps family protein"
                     /protein_id="HZC00081.1"
                     /translation="MEQSVEMSAKNRTGIDRSPVDSQQMIDAAQTTPPSSSGDESALA
                     ALDSVYIQSAEPVGSVPIPGTLKGVAQTILQKLTGKNPEVLIDKLGERL"
     gene            complement(310..1473)
                     /locus_tag="VE844_01555"
     CDS             complement(310..1473)
                     /locus_tag="VE844_01555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020160261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00082.1"
                     /translation="MAVKLFDSRGVSLEKQRFTWKDMVQPPISKLDDEAFTRVRIILM
                     NGLEVEALRFQHLCARMNKELQVPLAKVRRVEQHQQTTINWLISADHSPLETTIAYEQ
                     VAIEVTAAVAQNEPDPYLAQVYRFGLLEDFDHLYRYSALLDRLEGKDANNILQSHTDI
                     LPGRPTVDEHRAPENDVRDHYDRTKATTITKLHATTIMAAEYQTHDFYANIGPMYADP
                     VARQLYAEIASIEEQHVTQYESIIDPTETWLEKWLLHEATEAYNYYSCVEQETNPRIR
                     ALWERFLDYELGQFAYVSELFKKYERRDPAEIISETLPDPLPFKSNREFVRQVLNQEV
                     DLRTRGTQFVGKAQEDPASLDYRQQINSDGSPSQTVAAGYQWSPGTELNRKVA"
BASE COUNT          336 a          470 c          456 g          415 t
ORIGIN      
        1 caggcgttcc cccagcttat cgatcaagac ctcgggattt ttgccggtaa gcttctggag
       61 gattgtctgg gccacgcctt tcaaggtgcc ggggatcggc accgaaccca ccggttctgc
      121 ggattggata tagacgctgt ccagcgccgc cagcgccgac tcatctcccg aagagcttgg
      181 gggggtggtc tgtgccgcgt cgatcatttg ctggctgtcg acaggcgacc gatcgatgcc
      241 ggttcgattc tttgcgctca tttcaactga ctgttccatt tttcaactcc ttgcatggct
      301 ttcgatgatt caggcaactt tgcggttcaa ctcggtccca ggagaccact gatagcctgc
      361 ggccaccgtt tgggacggcg aaccgtccga attgatctgc tggcgataat ccagagacgc
      421 cgggtcttct tgagccttgc cgacgaattg ggtgccacga gtgcgcaaat ccacttcttg
      481 attgagcact tggcggacga attcacggtt gctcttgaac ggcaacgggt cgggcagcgt
      541 ctccgaaatg atctcggcag gatccctcct ctcatacttt ttgaagagtt ccgatacgta
      601 ggcgaactgt ccgagctcat aatcgaggaa gcgctcccag agcgccctga tgcgcggatt
      661 cgtctcctgc tctacacagc tgtaatagtt gtaggcttcg gtcgcttcgt gcagcagcca
      721 tttctccagc caagtttcgg taggatcgat gatcgattca tactgggtga cgtgttgctc
      781 ttcgatcgag gcgatctccg cgtacaactg gcgggcgacg gggtctgcat acattggccc
      841 gatattggcg tagaaatcgt gggtctgata ctcggcggcc atgatcgttg tcgcatgcag
      901 cttggtgatg gtggtcgcct tggtgcgatc gtagtggtcc cgcacatcgt tctcaggcgc
      961 ccgatgctca tccacagtag gccggcctgg caggatgtcc gtatgggatt gtagaatgtt
     1021 gttcgcatcc ttgccttcca ggcggtccag cagcgccgaa taacgataga gatggtcgaa
     1081 atcctccaat aatccaaagc gatagacttg agcgagataa ggatcgggct cgttttgcgc
     1141 caccgcagcc gtgacctcga tggctacctg ctcatacgcg atggtggtct ccaggggcga
     1201 gtggtctgcg gaaatgagcc aattgatggt ggtttgctga tgctgctcca cgcgcctgac
     1261 cttcgccagc ggcacctgga gctccttgtt catcctcgcg cagaggtgct gaaagcgaag
     1321 cgcttccacc tccaggccat tcataaggat gattctcacc cgagtgaagg cctcgtcatc
     1381 gagcttgctg atgggcggct gtaccatgtc tttccaggta aaccgttgct tctcgagaga
     1441 gactcctctc gaatcgaata gctttacagc cataacgcct ccctttcctt tcctaaagat
     1501 tcgatgaaac cgataatatg ccctgaacaa agaagcattt agcttttgaa atgcccttta
     1561 tttacgacac cggaaacagc atataattca agccaatcga ccaggtattt acgcacctct
     1621 ttccatagac cgactactcg gccgccctgc caaagcctcc ggaatcgtct ccttggc
//
LOCUS       DASQSL010000153         1103 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_96900, whole genome shotgun sequence.
ACCESSION   DASQSL010000153 DASQSL010000000
VERSION     DASQSL010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1103
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96900"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..329)
                     /locus_tag="VE844_01560"
     CDS             complement(<1..329)
                     /locus_tag="VE844_01560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00083.1"
                     /translation="MTPEPLRLQSADSLHAVLSLADEDRASVISLIQELVRIPTRGGL
                     DPCEPIIDCVSQWLTEHDLPSRRLHDIDTGRPVALACDVTGHHPGQRCVLDACLDTAP
                     FGDSSIW"
     gene            complement(326..721)
                     /locus_tag="VE844_01565"
     CDS             complement(326..721)
                     /locus_tag="VE844_01565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00084.1"
                     /translation="MQEIERVIQDKPRLIHYRILLGPPHSQVLKDHLLRLLALRAAQA
                     NGGSDAEQTLHISILNDLTRYPERFFVASEQAAVVILPSANCPMNFDTAIIVREPQYV
                     HRLLQHGKALYSKNRLESFDAINLLEVIE"
     gene            complement(858..>1103)
                     /locus_tag="VE844_01570"
     CDS             complement(858..>1103)
                     /locus_tag="VE844_01570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00085.1"
                     /translation="RVAAKADPTLRAGWPSKAQFYRWLSGELVGLPYPDHCRILERMF
                     PDWKVDQLFQTHDGGIDFVPEPSLLAKAPTASTNSAS"
BASE COUNT          256 a          280 c          311 g          256 t
ORIGIN      
        1 tgccaaattg atgaatctcc aaagggcgcg gtgtctaaac aggcgtcaag gacgcaacgc
       61 tgccccggat gatggccagt tacatcacag gcgagggcta caggccgacc ggtatcgata
      121 tcatgtaggc gccgggacgg caggtcgtgc tctgtgagcc attgcgatac acagtcgatg
      181 ataggttcac acgggtcaag acctccccga gttggtattc tcacgagttc ttgaattagc
      241 gagatgacac tcgcccggtc ctcatcagcg aggctcagaa ccgcgtgcaa gctgtccgcc
      301 gactgtaacc gtagaggttc cggcgtcatt cgattacctc taggaggttt atagcatcaa
      361 acgattcgag gcggtttttg ctgtagagcg ctttgccgtg ctgcagaagc ctgtgaacat
      421 actgcggttc gcgaacgatg atggccgtgt cgaagttcat gggacaattt gcggacggaa
      481 gtatgacaac agcggcttgt tcactcgcta cgaaaaatct ttcaggatac cgagttaaat
      541 cattgagaat actgatgtga agcgtctgct cagcatcaga accaccattg gcctgagcgg
      601 cgcgaagtgc tagcaggcgc aacaagtggt ccttgagcac ctgactatgt ggcggtccca
      661 acaagatccg atagtgaata agtcgtggtt tgtcttgtat tacgcgctcg atttcttgca
      721 agtatgatat ttcactcgaa cgcgatccga ccgctacaag gcattcttga gcgttccgaa
      781 cgacatctat tagggcagcg gtgagctcac ctccggaagt gacaagatgt tcactttggc
      841 cagttgagcc atttgattta gcttgcggaa ttggttgagg cggtcggtgc tttcgccagc
      901 aaggacggtt cgggtacgaa gtcaatcccg ccgtcgtgag tctgaaatag ttggtcgacc
      961 ttccagtcgg gaaacattct ctcgaggatg cgacagtgat cgggataagg aagtccaacc
     1021 aattctccgg aaagccaccg gtagaactgc gccttgctcg gccaccctgc ccgtagagtc
     1081 ggatccgctt tcgcggcaac cct
//
LOCUS       DASQSL010000154         1341 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_56215, whole genome shotgun sequence.
ACCESSION   DASQSL010000154 DASQSL010000000
VERSION     DASQSL010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1341)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1341)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1341
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56215"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(326..1153)
                     /locus_tag="VE844_01575"
     CDS             complement(326..1153)
                     /locus_tag="VE844_01575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00086.1"
                     /translation="MIRRNVGTVLVATALVLLLLIALGIARTIDHVPELALYITEDLF
                     GIVLAVFVLERVLARREERRWLAAKRWMYIILLETIDDLLRRLLPSAVPKEETDGETP
                     VYEVTGKRVRFGEVVAYGLLRMLVSPGDKDLQSHVFWYAKELEPLEYASRAKAALSDA
                     REQIRDTFASSARLMEADITAMLMNLEQAIMAAIEHMDSAISMRNEKVEGAPPLDGEE
                     PAKRVREADHQLAFTTSIIVESVVGSAVKPKAWLEAQLHHRQDGSPSEYLQVSDPKR"
BASE COUNT          281 a          423 c          350 g          287 t
ORIGIN      
        1 ccagggagag cgcgcatagc gaccaggcaa gccaggctgc ggcgcgcacg ctcatcctcc
       61 cgactcctcg gccctgcggg cggagtttgc ccatgggcgt cgtggtgctg cgggctccac
      121 ccctaccacg ctcccgttag atccctcgtc catgagtggt cgctgccatc accgctctgt
      181 cccctgacgg ggtcccattc tacatcgagt ccgtctcctg atcgttacga aaaccgttac
      241 gaagcccgag tatcccaaga aatttacgaa ccgttgaagg gatagaccac gggatctggc
      301 cagggcggga accggctcga cccgcttatc tcttggggtc gctcacctgc aggtactccg
      361 aaggtgatcc atcctgccga tggtgaagtt gagcctcaag ccacgctttc ggctttacag
      421 cggagccaac aacggattct acgatgatgc tggtagtaaa ggccagttga tgatcggcct
      481 ctctcacccg ctttgctggt tcctcgccat cgagaggagg cgctccttct accttttcgt
      541 ttcgcatgct tatagccgag tccatatgct ctatggcggc cataatcgcc tgttcgaggt
      601 tcatcaacat agccgtgatg tcggcctcca tcaaccgagc cgaggaggcg aacgtatccc
      661 ttatctgctc gcgggcgtcg gacaaagccg ccttagctcg gctcgcgtac tctaacggct
      721 ccaactcctt ggcgtaccag aaaacatgag actgcaaatc cttgtcaccc gggctaacca
      781 acatcctcag cagcccatag gcgacgacct caccgaaacg tactcgcttg ccggttacct
      841 cgtagacagg ggtttccccg tcggtctctt ccttgggaac tgcggaggga agcaaccgac
      901 ggaggagatc gtcgatcgtc tcgagcagga taatgtacat ccacctcttt gccgcaagcc
      961 accggcgttc ttctcgccgc gcgagcactc gctccaagac gaacaccgcg agcacgatcc
     1021 cgaacagatc ctcggtgata taaagggcta gttcgggtac atgatcaatt gttcgcgcga
     1081 tgccaagcgc tatgagaagt aacagcacca aggcggtcgc aaccaggact gtgccgacgt
     1141 tacgtctgat cacacctcac ccctttattt tctcctctcg atctgcggag cgagaagatg
     1201 aacctttccg ccctgcgttc tctaacacag catacccccg aagcggggaa cggtgcatca
     1261 caattcagtt acttttcggc gaatagctta catcaatagc aactaggttc gccggtgatg
     1321 ctcggcgtca gagaggcatt c
//
LOCUS       DASQSL010000155         2744 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_1382, whole genome shotgun sequence.
ACCESSION   DASQSL010000155 DASQSL010000000
VERSION     DASQSL010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2744
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1382"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1741
                     /gene="rnr"
                     /locus_tag="VE844_01580"
     CDS             <1..1741
                     /gene="rnr"
                     /locus_tag="VE844_01580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018234007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008997 - ribonuclease R activity
                     [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HZC00087.1"
                     /translation="ALVDVLERANRQVVGRYLQEGGIGLVVPDNRRINQDILISAGES
                     GKAKHGQMVVAEIIEQPSAWRQPLGRIVEILGDHMAPGMEIDIAIRAYELPQIWPEPV
                     LEAIKRLHPKVAEKDKRGRLDLRDLPLVTIDGEDAQDFDDAVYCERRAGGWRLLVAIA
                     DVSHYVAPDSALDEEARNRGNSVYFPGRVIPMLPEILSNGLCSLNPEVDRLCLVCDLS
                     LSPRGQVKYFQFKEAVMRSAARLTYTEVNALVVERKRTRQTHHKALLPHLEAMYQLYT
                     LLRERRQARGAIDFDTTETRIIFGKDQKIAQIVPLIRNDTHRLIEEFMIAANVAAAEF
                     LSSGKIPCLYRVHDRPEPQKLEDLRTFLGELGLSLGGRDKPEPRHYAELLAAVSQRDD
                     AHLIQTVLLRSLKLAVYSPENIGHFGLAFDAYTHFTSPIRRYPDLLVHRAIRHLLRRG
                     TAEGFSYDRNQIQLFGEHCSMTERRADEATRDAVNWLKCEYMVDKIGEVFEGIISGVT
                     AFGLFVEIKDIYVEGLVHVTSLRSDYYHFDPIGHKLRGERSGRVYRLAGKVKVRVVRV
                     DLDERKIDFDLVD"
     gene            1748..2515
                     /gene="rlmB"
                     /locus_tag="VE844_01585"
     CDS             1748..2515
                     /gene="rlmB"
                     /locus_tag="VE844_01585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013034403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HZC00088.1"
                     /translation="MIRHKVQTTLVYGIHAVRQALMDSPEQALELWIQRGRHDAAVAE
                     ISSLAGRHTLAVQQVPRATLDRLAEGAPHQGVVLKCRRLLPLTETDLSSILGSRAGVP
                     LLLILDGVQDPHNLGACLRTAEAAAVDAVIIPRHRAVGLTGTVRKAASGAAETVPLIE
                     VGNLARTVRELKETGVWLIGADAHAQDSLYRVDLTLPIALVLGGEGRGLRRLTGELCD
                     RLVRIPMHGQIASLNVSVAAGICLYEAVRQRGKLGAV"
     gene            2553..>2744
                     /locus_tag="VE844_01590"
     CDS             2553..>2744
                     /locus_tag="VE844_01590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00089.1"
                     /translation="MSGRFHLQLARTCDAERIALMSRDYVERGLGWSWTPRRVIDRIH
                     CPETVVLTASEASWIVGFAI"
BASE COUNT          530 a          746 c          889 g          579 t
ORIGIN      
        1 tgccctggtc gatgtactgg aacgggccaa ccggcaggtg gtcggccgct atttgcaaga
       61 gggtgggatc ggcttggtag ttcccgataa ccggcgtatc aatcaggata tcttgatctc
      121 cgccggtgag tccggtaagg ccaagcatgg ccagatggtg gtggccgaga tcatcgagca
      181 accctccgca tggcgtcagc cgctcgggcg gatcgtcgag atcttgggcg atcacatggc
      241 ccccggcatg gagatcgata tcgctatccg cgcctatgaa ttgccccaga tctggcccga
      301 gcccgtgctc gaagcgatca agcgattgca tcctaaggtc gccgagaaag acaaacgcgg
      361 gcgcttggat ctgcgagatc tacccttagt gaccatcgat ggcgaagatg ctcaggattt
      421 cgatgacgcg gtctactgtg aacggcgggc gggcggctgg cgcttgctcg tggcgatcgc
      481 cgatgtctcg cattatgtgg ccccggattc ggccttggac gaagaggcca ggaaccgggg
      541 gaattccgtc tatttccccg gccgggtgat cccgatgctg cctgagatcc tgtcaaatgg
      601 cctgtgctcg ctcaatcccg aggtggatcg cctgtgccta gtatgcgatc tcagcttgag
      661 tccacgggga caggtcaagt attttcagtt caaggaggcg gtgatgcgct cggcggcaag
      721 gctcacatac accgaggtca acgccctggt ggtggaacgc aaacggacgc ggcaaaccca
      781 ccataaagcc ctgctcccac acctggaagc gatgtatcag ctctatacct tgctgcgcga
      841 acggcgacag gcgcgggggg cgatcgattt cgataccacc gagacccgga tcatcttcgg
      901 caaagaccag aagatagcgc agattgtgcc cttgatccgc aatgataccc accggctgat
      961 cgaggagttt atgatcgccg ccaatgtagc ggcggcggag tttctctcaa gcggcaagat
     1021 cccctgtctg taccgggtcc atgatcgccc agagccgcag aaattggagg atctgcggac
     1081 cttcctcggc gagctgggct tgagtctcgg tggtcgagat aagccagagc cccggcatta
     1141 tgctgaactt ttagctgccg tgagtcagcg ggatgatgcc cacttgatcc agacggtatt
     1201 gttgcgcagc ctcaagctcg cggtgtatag ccccgagaat atcggccatt tcggcctggc
     1261 ttttgatgcc tacacccatt ttacctcgcc catccggcgt tatccggatc tcctggtcca
     1321 ccgggccatt cgccacctgc tgcggcgagg aacggcggag ggattcagct acgatcgaaa
     1381 tcagatccaa ctcttcggag agcattgttc aatgaccgag cggcgggccg atgaggcgac
     1441 ccgcgacgcc gtcaattggc tcaagtgcga gtatatggtg gataagatcg gggaggtgtt
     1501 tgaaggtatc atctcgggcg tcaccgcctt cggcttgttc gtcgagatca aagatatcta
     1561 cgtcgaagga ttggtgcatg tcacctcgtt gcgcagcgac tactatcatt ttgatcccat
     1621 cggacacaag cttcggggag agcgcagcgg ccgggtgtac cggctggctg gcaaggtcaa
     1681 ggtgcgggtg gtgcgggtgg accttgacga gcgcaagatc gattttgatc tggtcgattg
     1741 atcggcggtg atccggcata aggtacaaac aacactcgtc tatggtattc atgcggtgcg
     1801 gcaggccttg atggattcgc ccgagcaggc tttagaatta tggatccagc gtggacgtca
     1861 tgatgcggcg gtggctgaga tctcaagcct ggccggccgg catacactag ccgtgcagca
     1921 ggtgcctcgc gctaccctgg atcggctggc cgagggggcg cctcatcaag gggtggtgct
     1981 caagtgccgg cgactcctac cacttaccga gaccgatctg tcctcgattc tggggtcccg
     2041 agcaggcgtt cctttgctgc tgatactcga tggggtgcag gatccccaca atcttggggc
     2101 ttgtctgcgg acagccgagg ccgctgctgt agatgcggtg atcatacccc gccatcgggc
     2161 cgtgggcttg accgggacgg tccgcaaggc tgccagcggt gcggcggaga cggtgccgct
     2221 gatcgaggtg ggtaacctgg cccgcaccgt gcgcgaactt aaagagacgg gggtgtggct
     2281 tatcggggcc gatgcccatg cccaggacag cctctatcgt gtcgatctca ccttacccat
     2341 agcgctggtt ctgggtggtg agggccgggg tttgaggcgg ctgaccggcg agctttgcga
     2401 taggctggta aggatcccca tgcacggtca gatagcgagc ttgaatgtct cagtagccgc
     2461 cgggatctgt ctgtatgagg cggtacggca gcggggaaag ctcggggctg tataggcatc
     2521 ctgcctatga tgtatgctga gaggtaagag agatgagcgg ccgatttcat cttcagcttg
     2581 cgcgaacatg tgatgcggag cggatagcgc tcatgtcgcg cgactatgtt gagcggggtc
     2641 taggatggag ctggacgcca aggcgtgtta tcgaccgcat ccattgtccg gagacggtcg
     2701 ttctgacggc gtccgaagca tcatggatag tcggctttgc aatc
//
LOCUS       DASQSL010000156         1491 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_124902, whole genome shotgun sequence.
ACCESSION   DASQSL010000156 DASQSL010000000
VERSION     DASQSL010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1491)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1491)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1491
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124902"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            85..>1491
                     /locus_tag="VE844_01595"
     CDS             85..>1491
                     /locus_tag="VE844_01595"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZC00090.1"
                     /translation="MAAKLTILLGILLVLAVACGTAEAPDPTAVPASEPTAAPTEGGT
                     PQPTAVPQEAAPPAEVEIYSGEVKIMVGDFASERFDIVFSQGLAGDLNYGRILHGFLI
                     SDNEQREMVPGIAREWNLSDDGLTWTFTIREGVLWHDGTELVPEDVLWTFQHVFGPQA
                     VNYAVAPTALRVSGQIDTIEMNGRDVSLTTTIPATEIGNTLSESGTSWYSVMPAREEV
                     YNEAAAVAYDQNPIGAGPMSFVEHVRASSITFERFDDYYYQPDNGFPVDKRVNFERLT
                     LHLVPEESTRVAALQAGDADIAPISVASREQLENGGGRVIFGKEGSYVWVPFVWCWAD
                     PDLPCNKKEFRQALHYAIDKELIRDQLYGGPEVFQVKGWAAVTPSTIGYTPALDPFPF
                     DPERARQLLAEAGYPDGEGVPPIVLHTWQSTSIPFQTEAAQLAAEFWRRELGLDVEVR
                     VGDSTAIREAWAAGELSGD"
BASE COUNT          342 a          389 c          455 g          305 t
ORIGIN      
        1 ccgtctacta tgatcagatg tctcatcgag gatcagtaaa tatagggcag accgtcgagt
       61 ctggaatttt gaggaggaaa cactatggca gcaaagctca cgattctact tgggatactc
      121 ctggtattgg cagtggcgtg cggaacagcg gaggcaccag atcctactgc cgtcccggcc
      181 agtgaaccta ctgccgctcc tacggagggc gggacacccc agcccactgc tgtacctcaa
      241 gaagccgccc cgccagcaga ggttgagata tactctggcg aagtaaaaat tatggtgggg
      301 gactttgcca gcgagcgatt cgatatcgtc ttctcgcagg gacttgcggg ggaccttaac
      361 tatgggcgaa ttctccacgg gtttctcatc tcagacaatg agcagagaga aatggttcca
      421 ggtatagcga gggaatggaa cctctctgac gatggcttga cctggacctt caccattcgt
      481 gaaggcgttc tgtggcatga cgggaccgag cttgtcccag aagacgtgct ctggactttc
      541 cagcatgtct ttggtcccca ggctgttaac tacgcggtcg ctcctactgc gctgagagtg
      601 tctggccaga tagacacaat agagatgaac gggcgggacg taagtttaac taccactatc
      661 cccgccacgg aaatcgggaa tacgctttct gagtccggaa ccagctggta ctccgtgatg
      721 ccagcgaggg aagaggtgta caacgaagcc gcggcagtag cctacgacca gaaccccatt
      781 ggggctggac ccatgagttt cgtggagcat gttcgggcca gctccatcac atttgagcga
      841 tttgatgact actactatca gccggacaac ggttttcccg tagacaaacg agtcaacttt
      901 gagcggctga ctctgcacct ggtgcccgag gaatctacga gggtggcagc actgcaggcg
      961 ggagacgccg atattgctcc cattagcgtg gcgtcgaggg agcagttgga aaacgggggc
     1021 ggccgcgtga tattcgggaa agagggatcc tatgtgtggg tacccttcgt ctggtgctgg
     1081 gcggatccgg acttgccctg caacaagaag gagttccggc aagcgctgca ctacgccatt
     1141 gacaaagaac tcatccgaga ccaactctat ggaggcccag aggttttcca ggtaaagggc
     1201 tgggcggctg ttaccccgag taccattgga tacaccccag cgcttgatcc tttccccttc
     1261 gatccggaaa gggcacgcca gcttctggcg gaagccggtt atccggacgg ggaaggagta
     1321 ccgccgattg tgctccatac ctggcagtcc acatcgatac catttcaaac agaggcggcg
     1381 cagttagcgg ccgaattctg gagaagggag ctgggtctgg atgtggaggt cagggtaggg
     1441 gacagcaccg cgatcagaga agcctgggcc gccggtgagt taagcggtga c
//
LOCUS       DASQSL010000157         1251 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_96911, whole genome shotgun sequence.
ACCESSION   DASQSL010000157 DASQSL010000000
VERSION     DASQSL010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1251
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96911"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(93..725)
                     /locus_tag="VE844_01600"
     CDS             complement(93..725)
                     /locus_tag="VE844_01600"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC00091.1"
                     /translation="MDPPEAQPSRATAGRRSRPALEREALARAQRKSRDEGRTIVFVD
                     ETGCYLLPMVVKTYAPRGQTPVLRVPLSRDHLSVISGITAHGWLHARVQDQPFRGIDA
                     ARFLQQLTTQISVRLLLIWDGSPIHRCQGIKAFLASPAGPGVHLEQLPGDAPELNPDE
                     RVWNYLKRVELQNVICQHLGQLSYELGKAIKRLRQKPNIIRACIAQAGLV"
     gene            complement(713..997)
                     /locus_tag="VE844_01605"
                     /pseudo
     CDS             complement(713..997)
                     /locus_tag="VE844_01605"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
BASE COUNT          230 a          371 c          382 g          268 t
ORIGIN      
        1 attgccgtag caaagcttcg accaacgcca ctgagggtgt agatcaggcg catgtttacc
       61 gctttgccac ctactgagcc ttgagcaaag agttaaacca gcccagcctg agcgatgcag
      121 gcgcgaatga tgttgggctt ctgcctgagc cgcttgatgg ccttgcctaa ctcgtaggat
      181 agctggccca gatgctgaca gataacattc tgcaactcca cccgcttcag gtagttccag
      241 accctctcat cagggttcaa ctcgggagca tccccgggca actgctccag atggactccc
      301 ggcccagccg ggctggccag gaaggctttg atcccctggc agcggtggat ggggctgcca
      361 tcccagatga gcagcagccg caccgagatc tgggtggtca gctgctgcag gaaccgcgcc
      421 gcatctatac cccggaaggg ctggtcctgg accctagcgt gcagccagcc atgggcggtg
      481 atgccactga ttaccgacag atggtctcgg ctgaggggta cccggagcac tggagtctgg
      541 cccctgggcg cataggtctt gaccaccatg ggcaacaagt agcaacccgt ttcgtccacg
      601 aagacgatgg tccggccttc gtccctggac tttctttgag cgcgggccag cgcttctctt
      661 tccagcgccg gacggcttct tcgtcccgct gttgcgcgcg acggctgggc ttctggcggg
      721 tccacccata ctgcttgagg atgcggccca cctgggaagg gtggtatttg accccgaagt
      781 ggcgtcggat gacctgggct actctgggct gggtccagac atcaccacga aagcccaagg
      841 ccgatggccc ctgggccagc agttccagta gctggagccg ctgctggtgg gccaatttgg
      901 gctggcgacc gggaggcttg cagtggcgta gggcttgggg accttgggtc ctgctccggc
      961 tcagccactg gctgacggcc cctttgctcc tccccaaggc ttcggcgatg cgctgctggg
     1021 gtcagccttc ctgggatagc tcccaggcgc gcagccggcg tccttcccgg cagttggtag
     1081 cttgttggga actcagtcct gtcatacatt ccagtatgcc agtccttcac tcggatgttt
     1141 agttctatct tcaagagtca gtaattgagt acctattgcc gcacaatcac gtcggcgaag
     1201 agagggatgt aatggacgaa caatttacaa atatgtttat agggcttaat g
//
LOCUS       DASQSL010000158         1816 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_152328, whole genome shotgun sequence.
ACCESSION   DASQSL010000158 DASQSL010000000
VERSION     DASQSL010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152328"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..363
                     /locus_tag="VE844_01610"
     CDS             <1..363
                     /locus_tag="VE844_01610"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010313700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HZC00092.1"
                     /translation="LFQLGTLHHYAGERSPQSIMAEYIDALPSGSHVVISHFCDPETT
                     LELSELARRLEQIFLRSPMGSGVFRTRAEIEGMFPGLELIEPGLIQCVNWRPEGPRSS
                     KPLEPVQHCMVGAVGRKP"
     gene            complement(423..1226)
                     /locus_tag="VE844_01615"
     CDS             complement(423..1226)
                     /locus_tag="VE844_01615"
                     /inference="COORDINATES: protein motif:HMM:NF017532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HZC00093.1"
                     /translation="MRVALTLDQLEQYTEHGFLLIRDLMHEEVGVIRENIERSATDAT
                     PGRMLEKDGDTLRGLRGTHLTNEFFARLVRYPKILTPAQRLLGSNVYVYQFKINLKRA
                     FVGDMWQWHQDFSYWHHEDGMPAPQALTAVIFIDRVDETNGPLLLIPGSHRSGLIPVE
                     RSTASDRQRWSSSFTAGVNYTVPNQVVVELAHKYGITTVMGEPGTVLFFAPNVVHGSP
                     QNMSPFDRTMLFTTYNSVDNHLREVKNPRPNFLVTRNGDPISPLGHELI"
     gene            1479..1631
                     /locus_tag="VE844_01620"
     CDS             1479..1631
                     /locus_tag="VE844_01620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00094.1"
                     /translation="MRQSPTWIVVTGRVIAGVMTPTRRGGVVAPLIDPALLEPHRFMP
                     PPAAKG"
     gene            complement(1603..>1816)
                     /locus_tag="VE844_01625"
     CDS             complement(1603..>1816)
                     /locus_tag="VE844_01625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00095.1"
                     /translation="QPGSRRSARSAARTNGLEAGHDDAILIQPGAGGAVCGVQLSGSV
                     FMVAEDQLRRSRGVWLPVIPSPLVAA"
BASE COUNT          370 a          550 c          527 g          369 t
ORIGIN      
        1 ctattccagc tcgggaccct gcaccactac gccggtgagc gcagtccgca gagcatcatg
       61 gccgaataca tcgacgccct gccctccggc tcccacgtgg tgatcagcca cttctgcgac
      121 ccggagacca ccctcgagtt gagcgaactc gcccgaaggc tggaacagat cttcctacgc
      181 agcccgatgg gcagtggagt gtttcgcacc cgcgccgaga tcgagggcat gttcccgggc
      241 ttggaactga tcgagccggg tctgattcag tgtgtcaact ggcgacctga gggcccacgg
      301 tccagcaagc cgctggagcc cgtgcaacac tgcatggtcg gagcggtcgg gcgcaagccc
      361 taaacggttt tcccggctcc ccaccaatcg cctagctcct caagcgagga cgtaaatagg
      421 gcttagatca gctcgtggcc aagtggggaa ataggatcac cattccgcgt aacgagaaaa
      481 ttcggtctcg gattcttcac ctcgcggagg tggttgtcga cactgttgta tgtcgtgaac
      541 aacatcgtgc ggtcgaacgg tgacatgttt tgaggggagc cgtggacgac attcggggcg
      601 aagaacaaaa ccgtccccgg ttctcccatc acggtggtta taccatattt gtgcgccagc
      661 tcaacaacga cctggttggg tacagtgtaa tttacacccg cagtgaagct cgagctccaa
      721 cgctgcctgt cggatgcggt ggaccgttcg accggtatca agcccgagcg gtgcgaacct
      781 ggtatcagca gaagtggtcc attggtttca tccacccggt caatgaatat gactgctgtc
      841 aaagcctggg gggcgggcat gccgtcctcg tggtgccagt agctaaagtc ctggtgccat
      901 tgccacatat cccctacgaa tgcccgtttc aagttgatct tgaactgata gacatagacg
      961 ttcgaaccca acagtcgttg agctggggtg agtatttttg ggtaccgaac gagccgcgcg
     1021 aagaactcat tggtaaggtg cgtcccgcgc agtccccgta gcgtgtcacc gtctttctcg
     1081 agcatccgtc ctggtgtggc atccgtggct gaacgctcaa tgttttccct gatcactccg
     1141 acttcttcat gcatgagatc acggatgagc aaaaagccgt gctcggtgta ctgctcgagc
     1201 tggtcgagag taagcgcaac ccgcatcgtc cgtctccgaa actgtaagtt cgcgacccaa
     1261 ggcaaccgaa taataacgaa ccactcatcc ggcgatctgt gtgcattgcg atctaggata
     1321 acataaccca gcggtttccc ttctgaagct ttcagaggat gtctgataaa gggcatgcca
     1381 agagtgtggg ctgggaagac gtgatgagga cttaaggcgg gagatgcgga cccgtagcgg
     1441 gcgcaccctt cccaccacga cggaccggag gatcgggctt gcgccaaagt ccgacctgga
     1501 ttgttgtcac agggcgcgtg atcgccgggg tcatgactcc cacccgccgt ggtggcgtgg
     1561 tcgccccctt gattgatccc gctctgctgg agccgcaccg cttcatgccg ccaccagcgg
     1621 cgaagggatg accggcaacc aaacccctcg gctccgcctg agctgatctt cggcaaccat
     1681 gaagacggaa cccgacaact gcacaccgca tactgccccg cccgctcccg gctggatcag
     1741 tattgcgtca tcgtggccgg cctccaggcc gttcgtcctc gctgcactgc gggcgctgcg
     1801 cctggacccc ggctgc
//
LOCUS       DASQSL010000159         1291 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_42430, whole genome shotgun sequence.
ACCESSION   DASQSL010000159 DASQSL010000000
VERSION     DASQSL010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1291
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42430"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1169)
                     /locus_tag="VE844_01630"
     CDS             complement(<1..1169)
                     /locus_tag="VE844_01630"
                     /inference="COORDINATES: protein motif:HMM:NF033540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS701 family transposase"
                     /protein_id="HZC00096.1"
                     /translation="MLPACRTEHEGVAIPQWAMDHRDVEGFLHELQGFHDAFRDCFAR
                     SEPREHFFRYMVGQFSGLERKSIEPIALRVEGGKVRAMQRCLSEVAWDDVQMLRTYHR
                     LVDDDMGDPEGVLLFDESSFPKKGHDSVGVARQYCGTLGKVDNCQVGVFAAYASRHGY
                     ALVDKQLFLPEPWLTDAYARRRTQCQVPDDRGFQTKPHLAAAMLRELRDEGVLPFKYV
                     VADCVYGNSPEFLHAIEACPGLIYFVSIPSDTRCWLEGPVMAAKHRKYQGEVRSTRVV
                     ARKAKPPMTIEAVAQSLHDCFWYRRHVSAGTKGPIVYEFTKRQVTLCKDGQPDKTVWL
                     VMKRTIGEHPVYWYYISNAPVSTRLPTFVWLSGMRWAIEQCFEETKSELGMDQYE"
BASE COUNT          274 a          409 c          344 g          264 t
ORIGIN      
        1 atttcatact gatccatccc caattcgctc ttggtttcct caaagcattg ttcaatggcc
       61 cagcgcatgc cacttaacca cacgaacgtc ggcaagcggg tactcacagg cgcattgctg
      121 atgtagtacc aatatacagg atgctcgccg atggtccgct tcatcaccag ccacactgtt
      181 ttgtccggct ggccatcttt gcacagtgtc acctgtctct tggtaaactc atagacaatg
      241 ggacctttgg tccctgccga cacgtgccgc cgataccaaa agcaatcatg gaggctttgg
      301 gcaacggcct cgatcgtcat cgggggcttg gccttccggg cgacgacccg tgtggagcgt
      361 acctctccct gatatttgcg gtgcttggct gccatgactg gaccctccag ccaacagcgg
      421 gtatccgagg gaatcgagac gaaatagatc aggccggggc aagcctcgat cgcgtgcaga
      481 aattccgggc tgttgccata cacacaatca gcgacgacgt acttgaacgg cagcaccccc
      541 tcgtcgcgga gctcccgcaa catcgccgcc gctaaatggg gcttggtctg aaagccgcgg
      601 tcgtcgggca cctgacactg cgtgcggcgg cgcgcatacg cgtcggtcaa ccacggctcc
      661 ggcaggaaga gctgcttatc caccagtgca tagccatggc gggacgcgta cgcggcaaac
      721 accccgacct gacaattgtc gactttcccc agcgtcccac aatactgccg cgcgaccccc
      781 acggagtcgt ggcctttttt cggaaagctc gactcatcaa agagcagtac tccctcagga
      841 tcgcccatat cgtcatcgac cagacgatgg taggtccgca gcatctgcac atcatcccag
      901 gccacctcgc tgagacaacg ctgcatcgcc cgcactttgc ccccttcgac ccgcagcgcg
      961 atgggctcaa tcgatttgcg ttccaggcca ctgaactggc cgaccatgta gcgaaagaaa
     1021 tgttcgcgcg gctcgctccg ggcaaaacag tcgcggaagg cgtcgtgaaa cccctgcagt
     1081 tcgtgcagga agccttcgac gtcgcggtga tccatggccc actgggggat agcaaccccc
     1141 tcatgctctg tccgacaggc tggtaacatc ctctgcctcc tcattggtgg ttgccgatct
     1201 ggaagcagag tagaagtgag aagtactgtg gtcaatcact aaatggcgtt gtagggctac
     1261 gtgcttctgc tcacgaagca ccatatcatc t
//
LOCUS       DASQSL010000160         1327 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_15247, whole genome shotgun sequence.
ACCESSION   DASQSL010000160 DASQSL010000000
VERSION     DASQSL010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1327
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15247"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..234
                     /locus_tag="VE844_01635"
     CDS             <1..234
                     /locus_tag="VE844_01635"
                     /inference="COORDINATES: protein motif:HMM:NF024776.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC00097.1"
                     /translation="ILLLAAGKTFNQVARALRVLRQTVYKWGKRWRRAPTPSKNLSMG
                     VWYVYAYIPSWKKPYFSVQRTVRKAAPPLTSVR"
     gene            253..1203
                     /locus_tag="VE844_01640"
     CDS             253..1203
                     /locus_tag="VE844_01640"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZC00098.1"
                     /translation="MNTTLFIVVVIVIAGLILTSLVVEAMRAEPDKPAVLSWAPDLPV
                     QYTLIDGIRLRYVKTGDGPPLVLLHTLRTQLDIFQKIIPELAKTFTVYTLDYPGHGWS
                     DIPATDYTPAFFVDIVGKFLDEQRIGNATLAGVSIGGTIPLLLAAHRHSAVARVVAIN
                     SYDYAKGRGITRANLVAWLIFTLARIPVLGETVMRFRNPLVERKVLEGGVAEPDALPE
                     SFLRETYAVGCRRGHYRAFLNLIRNAYKWEEARSEYGKISVPVLVVYGDQDWSRESER
                     RATLERIPGAKLEVVKNGGHFLSLDCPQDIIRLIREFTNV"
BASE COUNT          266 a          369 c          385 g          307 t
ORIGIN      
        1 attttactgc tcgctgcggg caagacgttt aatcaagtgg cgcgggcctt gagggtgctg
       61 cgtcagaccg tctacaagtg gggtaagcgc tggcggaggg cccctacccc ctctaaaaac
      121 ctctctatgg gcgtctggta tgtctatgcc tatataccat cgtggaaaaa accatacttt
      181 tcagtgcagc ggacggtgcg aaaagccgcg ccgccgctga cctcagtacg ttaaagctct
      241 tgaggaacga gcatgaatac aaccctattc atcgttgtcg tgatcgtgat tgctgggctg
      301 attcttacct ctttagtggt tgaggccatg cgagcggagc cggacaaacc ggcggtgttg
      361 tcctgggcgc ctgatctccc cgtacaatac accctcattg acggtatccg gttacgttac
      421 gtgaagaccg gcgatggacc gccactggta ttgttacaca cactgcgcac tcaactcgat
      481 atcttccaga agatcattcc tgagcttgcc aagactttca cggtctatac cctcgattac
      541 cctggacacg gctggtcgga catccctgcg acggattaca cgccggcatt cttcgtcgat
      601 atcgtcggca agtttctgga tgagcagaga atcggtaatg ccacgctggc gggggtctcg
      661 atcggcggca cgattccctt gctgcttgcg gcgcaccggc attcggccgt tgcccgcgtc
      721 gtcgccatca attcctacga ttacgctaag ggccgtggca tcacccgtgc gaacttagtg
      781 gcctggctga tctttacctt ggcccgtatc ccggtactcg gggaaaccgt aatgcgcttc
      841 cgcaatccct tggtcgaacg caaggttctg gaaggcgggg tcgccgagcc cgatgccttg
      901 ccagaatctt tcttgcgtga gacatatgcg gtgggttgcc gccgcggcca ctaccgggct
      961 ttcttgaatc tgatccgcaa tgcttataaa tgggaagagg cccggtcgga atatggcaag
     1021 atttccgttc cggtgcttgt cgtctatggt gatcaggatt ggtcgcggga atcggagcgg
     1081 cgcgccacct tggagcgaat tcccggtgcc aagctggagg tggtcaagaa cggcggacac
     1141 ttcctcagtc tggactgtcc gcaggatatc atccggctca ttagagaatt cacgaatgtc
     1201 tgaccgaagc aatgcaccac gccctgatcg agccctaaca catcgctcca cacggacgtg
     1261 cctagatcgg cgcgccggtg agcgatgggg ggagcttgga cgaagtggag cgagtggtgt
     1321 tttgaat
//
LOCUS       DASQSL010000161         1587 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_69939, whole genome shotgun sequence.
ACCESSION   DASQSL010000161 DASQSL010000000
VERSION     DASQSL010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69939"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            205..>1587
                     /locus_tag="VE844_01645"
     CDS             205..>1587
                     /locus_tag="VE844_01645"
                     /inference="COORDINATES: protein motif:HMM:NF033559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC00099.1"
                     /translation="MYVDVSSLRRNGKTYTRYLLRECYREEGKVKHRTVASLSRCSPE
                     EIEAIRLALRHKQELAALGAIKDSVQLHQGPSIGAVWLVYQVAHQLGIEQALGPSRQG
                     RLALWQVIARVIDQGSRLSAVRLAATHAACDVVGLERFDEEDLYGNLDWLSVHQAKIE
                     DRLFRFQSKETASGLFLYDVTSSYLEGNHNELGAFGYNRDGKRGKRQLVMGLLCNGGG
                     RPLSIEVFAGNTQDPKTFTPQVKKVAERFGGREITFVGDRGMIKSHQIQALGERQFHY
                     ITAITKPQIEALLKSDALQLDLFDETLAEITTEEGLRYILRRNPHRAEESAASREDKY
                     QTLSKAAVGYNHYLSAHPRARVEVALRRLENRRQKLRLAQWVKLFIEGREIRVAKDPQ
                     ALREIAKLDGCYVLKTDLSREVASKETVHDRYKDLALVEWAFRESKTVHLEMRPIYVR
                     LESRTRGHAFV"
BASE COUNT          369 a          438 c          443 g          337 t
ORIGIN      
        1 catcccttcc gctctctgcg ggtggatggg caaggcgcac gggttgatct tttgatgcag
       61 ttccaacgaa tgttccccct gtgataagga taaaaatctc tatgatacag taggttatct
      121 attatttttg ggttttatgt aaccactaaa atagtcataa taatctttac attagtggaa
      181 cattatggta tataagtaac cactatgtac gtggacgttt cctctctccg ccgaaacggt
      241 aaaacctata cccgctatct tctgcgcgag tgctatcggg aagaaggtaa agtcaaacat
      301 cgcaccgtcg cgagcttaag ccggtgctcc ccagaagaaa ttgaggccat ccggttggcc
      361 ctgcggcata aacaggaact ggccgcgctt ggggccatca aagactcggt ccaactgcac
      421 caaggtcctt ccattggcgc ggtatggttg gtctaccagg tggcgcacca gctggggatc
      481 gagcaggcct taggccccag ccggcaagga cgattagcct tatggcaggt gatcgcccgg
      541 gtcatcgacc aaggttcacg gctttcggcc gtgcgattgg ccgccaccca tgccgcctgt
      601 gacgtggtgg ggttggagcg gtttgatgaa gaggacctct atgggaatct cgattggttg
      661 tcggtccatc aagccaagat cgaggaccgc ctgtttcggt tccaatccaa agagacggcc
      721 tcggggctgt ttctctatga tgtcaccagc agttacttgg aaggcaacca caatgagctc
      781 ggggcctttg gctataatcg cgatggtaaa cggggcaagc gccaactggt catggggcta
      841 ttgtgcaatg gcgggggaag gcccctctcc attgaggtgt ttgcgggcaa cacgcaagac
      901 cccaaaacct ttactcccca ggtcaaaaag gtggccgagc gctttggggg cagggagatc
      961 acctttgtcg gcgaccgggg gatgatcaaa agccaccaaa tccaagccct gggggagcgg
     1021 cagtttcatt acatcaccgc catcaccaag ccccaaattg aggccttgtt aaagagcgat
     1081 gccctgcagc ttgacctctt cgatgaaacc ctcgccgaaa tcaccaccga ggagggcctg
     1141 cgctacatcc tacgccgtaa cccccaccgc gccgaggaga gcgccgcttc ccgtgaagac
     1201 aaatatcaaa cgctgagcaa ggcggcggtc ggatacaacc actatctctc agcgcaccct
     1261 cgtgcccgtg tggaggtagc cttgcgccgg ctggagaacc gccgccaaaa actccgcctc
     1321 gcccagtggg tcaagctctt tatcgaaggc cgggagatcc gagtggccaa ggatccccag
     1381 gccttaaggg agatcgccaa actagacgga tgctatgtct tgaaaaccga tctctctaga
     1441 gaagttgcaa gcaaagaaac ggtgcatgac cgctataaag atttggcctt ggtcgagtgg
     1501 gcctttcgcg agagcaaaac ggtccacttg gagatgcgcc ccatctatgt ccggctcgag
     1561 agtcgcactc gcggccatgc cttcgtg
//
LOCUS       DASQSL010000162         3732 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_15257, whole genome shotgun sequence.
ACCESSION   DASQSL010000162 DASQSL010000000
VERSION     DASQSL010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3732)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3732)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3732
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15257"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..205)
                     /locus_tag="VE844_01650"
                     /pseudo
     CDS             complement(1..205)
                     /locus_tag="VE844_01650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009896725.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
     gene            complement(273..1967)
                     /locus_tag="VE844_01655"
     CDS             complement(273..1967)
                     /locus_tag="VE844_01655"
                     /inference="COORDINATES: protein motif:HMM:NF033559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC00100.1"
                     /translation="MARLQRVRVEGRSYWRIVESRRVNGKPRAVPILHLGTADALLNR
                     LLQAPEGHLTVQSFHHGDVAALKAVADRLQVVSLIDRHVPNKVRSLSVGTTLLLAAIN
                     RVVRPRSKRGWTAWARGTSLPLLFPGLKGETLSSQYFWDQMDCVEMVALRAVEDDLTR
                     TVVTELGIELDTLFYDTTNFFTYIASTTDRSTLAQRGHSKQKRHDLRLFNLALLVCRA
                     GQIPLCSCVYEGNRVDVTAYPESLTHIGERLEALSLSLKDITLVYDKGNHSKSNQALV
                     DEAPFGYVASLVPAHHPELLASPVSHYRPLTGSRLGLIPGLRLTCEIWGKQRTVLLFI
                     SEQLRAGQRRGLQQHLAKRLRELAEWQAQLAKPRSGPRTRASAQKRIEQLLAGQYLKQ
                     VLRVDYDPERQGAQRLQYRIDEAALRQLETEVFGKRLLITDRHEWSDEEIVLAYRGQS
                     YVEGTFRQLKDTEHLAVRPQYHWTDQKVHVHTFLCLLGLLLARVIEYQARRLGYRQGL
                     SGLLELLGTIRLAMVLQPALTPGKRPRCTWQLEQTDPDAWRLFCHLVPHKPPFVYT"
     gene            2214..3565
                     /locus_tag="VE844_01660"
     CDS             join(2214..2459,2462..3565)
                     /locus_tag="VE844_01660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611785.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISKra4 family transposase"
                     /protein_id="HZC00101.1"
                     /translation="MSQKSIDERLKAHPLLQGRIEAILDRVEDSAGEVERADEAERRM
                     IEEVRQLGNEALQSWAERKIGEQEGTVLGQGEGVKRNGKKLCWYTTFGSIEVVEPILI
                     QRGRTLYPFRSGAGVRARGYSGPLQRAMTEFGADESFEKAVGKLKEHYGVEVPVSAVR
                     EVTLRHGAQMAVEEEPSEVAEGAHEGAVGASLPMSSAERVIAEVDGSMIPIVRVAPPS
                     EGEPEAGRKRRQLEWNEARLSLARAKGCVMPHFAATRGGPDEAGDQLKHCALQAGMGK
                     NTTVHCVGDGAPWIADQVERVFGAQGGFLVDFYHLCEYVGAAAKSCAPAAPEPWFETQ
                     KQRLKEGQVDEVLAALSPHQEPAATPDANAPVRRCYRYITNRPGQFDYPAALAAGLPL
                     GSGEIESAHRYVIQDRLKIAGAWWKPDNAHCMLALRVNRANGAWNDYWSQQELKQAA"
BASE COUNT          805 a         1020 c         1196 g          711 t
ORIGIN      
        1 tcggcagcaa gcgctcggtt gcgccacgaa tggcggtgtc gagcccccat cccattccct
       61 ctcgggcggc cagatcctcg tagtgtgaga tcatgagaat cgaattgcgc atgctgatgc
      121 cgaacaggga gacaaaccca accaatgaac cgatcgagag cgacccaccg cttaggaacg
      181 cggccaacac tccacccgct agcgcgactt tactggatat ggcgtgcaat tttgcggtaa
      241 ctgtttgtag caaaaggatt ttcggtgggg catcacgtat acacaaacgg cggcttatga
      301 ggtacgagat gacagaacag acgccaagcg tcagggtcgg tttgctcgag ctgccaagtg
      361 caacgaggac gtttgcctgg ggtgagggcg ggttgcagca ccatggccaa gcggatagtg
      421 cccaatagct ccagtaaccc ggacagcccc tggcgatagc cgaggcgacg ggcttggtac
      481 tcgatgaccc gggccaacag caagcccagc aggcagagga aggtatgcac gtgcaccttc
      541 tggtcggtcc agtggtactg aggccgaacg gcgaggtgct cggtgtcctt aagctggcga
      601 aaggtgccct ccacataact ctggccgcga taggccaaca cgatctcctc atccgaccac
      661 tcatggcggt cggtgatcag caggcgcttg ccgaagacct cggtctccag ctgcctcagg
      721 gcggcctcgt cgatccggta ctgcaagcgc tgggcgccct ggcgctcagg gtcatagtcc
      781 accctcagca cctgcttgag gtactggccg gcgagcagct gctcgatacg cttttgggct
      841 gaggctcggg tgcgcggtcc cgagcggggt ttggccagtt gagcttgcca ctcggccagc
      901 tctcgcagcc gcttggccaa gtgctgctgc aggccgcggc gctggccggc gcggagctgc
      961 tcgctgataa acaacagcac cgtgcgctgc ttcccccaga tctcgcaggt cagccgcagc
     1021 cccgggatca gccccaagcg gctgccagtg agcggccgat agtggctgac cggactcgcc
     1081 agcagctccg gatgatgggc cgggaccaag gaagccacat acccaaaggg cgcctcatcg
     1141 accaaggctt ggttgctttt tgagtgattg cccttgtcat agaccagggt gatgtccttg
     1201 agcgacaacg acagggcctc caggcgctcg ccgatgtgcg tcagcgactc ggggtaggcg
     1261 gtgacatcga cccgattgcc ttcataaacg catgagcaca acgggatctg gccggcccgg
     1321 cagaccaaca acgccagatt aaacagccgc agatcatggc gcttttgctt ggaatgtcct
     1381 cgttgtgcca gagtggaccg gtcagtcgtg gaggcgatat aggtgaagaa gttggtggtg
     1441 tcgtaaaaca gggtatccag ttcaatgccc agttcagtga ccacggtgcg ggtcaagtcg
     1501 tcttcgaccg ctcgcagcgc gaccatctcc acacagtcca tctgatccca gaagtattgg
     1561 gagctcaggg tctccccttt gagtccgggg aagagcaggg gtagcgaggt gcctcgcgcc
     1621 caggctgtcc aaccacgctt ggaacgcggt cgcaccaccc gattgatggc ggccagcagc
     1681 aacgtggtgc ccacagagag tgaccgcact ttgttcggga cgtgacggtc gatgagggat
     1741 accacctgaa gtcgatcggc cacggctttt agggcagcca cgtcgccgtg gtgaaaggac
     1801 tgcacggtca agtggccttc gggtgcctgc agtagccgat tgagcagcgc atcggcggtg
     1861 cccagatgga gaatgggtac tgcccgaggc ttgccattga cgcgccgtga ttcgacaatg
     1921 cgccagtagc tccgaccctc aacccggact cgctgcaagc gggccatggc cttgtgtata
     1981 caaagattaa gtatccgttg tcaagcccta ttcatatcta tacttataca aaagtattat
     2041 aactaaattt ttgtatatac ataaaaaagc cccagcaagg ttttccaact gtttgtttct
     2101 acagcagttt cctgcctgca acaacgcttc tcttgttcaa atctagtaaa gtcgcgctag
     2161 gcaagtgagc ggaattgtag tagagaaggg ggagcaatga gaggaggcta cccatgagtc
     2221 agaagagcat agatgagcgg ctgaaggccc atcccctgtt gcagggtcgt atcgaagcga
     2281 tcctggatag agtagaagat agcgctgggg aggtagagag ggcggatgaa gccgaacggc
     2341 ggatgattga agaagtccgt cagttgggga atgaagcact gcagagctgg gcggagcgca
     2401 agataggaga gcaggagggt acggtgctcg ggcaggggga gggagtcaag aggaacggta
     2461 aaaaaaactt tgctggtaca cgacgttcgg ctcaatagaa gtggttgagc cgatcttgat
     2521 tcagaggggc cgcacgctat acccgtttag gtcaggggcg ggggtgaggg cgcggggcta
     2581 ttcggggccg ttacaacggg cgatgacgga gtttggggcg gatgaatcct ttgagaaggc
     2641 ggtgggcaag ctcaaagagc attatggagt tgaggtcccg gtcagtgcgg tacgggaggt
     2701 gaccctcaga catggggcgc agatggcggt agaggaggaa ccgtcggagg tagcagaggg
     2761 agctcacgag ggggctgtag gggcatccct gcccatgagt tctgctgaga gggtcattgc
     2821 cgaggtggat gggagcatga ttccgatcgt gcgggtcgcg cccccgagtg aaggggagcc
     2881 tgaggctggg cgcaagcgcc gccagttgga atggaacgaa gcccgcttga gtctagcccg
     2941 tgcaaaggga tgcgtgatgc cgcactttgc ggctacccgg ggcggccccg atgaggctgg
     3001 agatcaactc aagcactgtg cactccaggc agggatgggt aaaaacacaa cggtgcactg
     3061 tgtcggggac ggcgccccgt ggatcgccga tcaggtagaa cgggtctttg gcgcgcaggg
     3121 aggctttctg gtggatttct atcatctgtg tgagtatgta ggggcagcgg ccaagagctg
     3181 tgcgcctgcg gcccccgagc cctggtttga gacccagaaa cagcgtctta aagagggaca
     3241 ggtcgatgaa gtgctcgcgg ccctgtcccc ccatcaagag cccgcggcta cccccgatgc
     3301 taatgcgccg gtgagacgct gttatcgcta tatcactaat cgtcccggcc agttcgatta
     3361 ccccgccgcg ttagcagccg gcttacccct cgggtcaggt gagatcgaaa gcgcccaccg
     3421 ctatgtgatc caggaccgct tgaagatcgc cggggcctgg tggaaacccg acaatgccca
     3481 ctgcatgctc gccttacgcg ttaaccgggc caatggggcg tggaacgatt actggtccca
     3541 acaagaactc aagcaagccg cttagtcttg aagcagccct cagttttaat tgcacccgat
     3601 acgaagagaa ttcttgcaaa tgggtgccca ttacgcctgg acctctcccc gtgtatcacc
     3661 ccgatttccc cgtttgttgc tcactgccac caggtcggta ctcgacgcac ggtcaagtac
     3721 cagcttcggc aa
//
LOCUS       DASQSL010000163         1515 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_124988, whole genome shotgun sequence.
ACCESSION   DASQSL010000163 DASQSL010000000
VERSION     DASQSL010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124988"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            114..1112
                     /locus_tag="VE844_01665"
     CDS             114..1112
                     /locus_tag="VE844_01665"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020229854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HZC00102.1"
                     /translation="MPCRNEREHIGTCLRSILAQEMPPGGFEVIIADGLSDDGTRNIL
                     MSLAEQDSRLRVIDNPGRIVSTGLNAAIRAAQGSTIIRMDAHTEYASDYICQCLAVLE
                     ETGADNIGGSCIAKGEGLVGQAIAAAFHSPFAVGGARGHDPHYEGGLDTVFLGCWRRE
                     VFGRVGLFDEELVRNQDDEFNVRLTRAGGRIWQSPRIVSWYKPRASLGALFRQYLQYG
                     YWKVRVIQKHKRPASVRHLVPALFILLLIALLPASIWWPPAARAWLGLVGLYSASNIA
                     ASCITASRSGWEHFPLLPLVFTCYHVAYGVGFLLGLVDFVILRRRSHQLFTALTRT"
     gene            1167..>1515
                     /locus_tag="VE844_01670"
     CDS             1167..>1515
                     /locus_tag="VE844_01670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00103.1"
                     /translation="MAPEAPARRVLSLCRLYAGMRAIGVTLQEALWQKPPVIWCKDQF
                     AVDPRSLETCHERSLPLYWPARKELQSSPCNTAFEDARLTAHAFHRGTEFITEMPQVE
                     TAHIPQLDAFELLP"
BASE COUNT          296 a          428 c          441 g          350 t
ORIGIN      
        1 gtcaccgcta ccgccgagac ctcatcagta tgggcgttgt caatgccgac aaagtcgagg
       61 ttagcatgga ttcccagctt gaaaacggac caacagtagc tgtctctgtt atcatgcctt
      121 gccggaacga gagagagcac attggaacct gcttgcgttc gatcctcgcc caagagatgc
      181 cgccgggagg ttttgaagtc attattgccg atgggctgtc cgacgacgga actcggaata
      241 tcctcatgtc cctggcagag caagattcac gcctgcgggt tatcgataat cccggtcgta
      301 ttgtttcaac cggtctcaac gccgctattc gggcagctca ggggagcact attattcgca
      361 tggacgcgca tacagagtat gcgagtgatt acatctgcca gtgcctagct gtactcgaag
      421 agactggtgc agataatatt ggtggctcat gcattgcgaa aggcgaagga ctcgtggggc
      481 aggccattgc ggctgcattc cactccccat ttgccgttgg aggtgcacgg ggacatgatc
      541 cacactatga aggagggctc gacaccgtct ttctggggtg ctggcggcgt gaagtctttg
      601 gccgagtggg gttgttcgac gaggaactgg tccgtaatca ggacgatgag tttaatgtgc
      661 ggcttacgcg agctggtggc aggatctggc aatcgccccg catcgtaagt tggtacaaac
      721 cgcgcgcctc gttgggagcc ctgttccggc agtatctgca gtacggatat tggaaagttc
      781 gggtcattca gaaacataag cgaccggcct cggtgcggca cctcgtgccg gcattgttta
      841 tcctcctact tatcgccctt ctaccggcgt ctatctggtg gcccccagca gctcgggctt
      901 ggctgggact ggtggggcta tactctgcgt ccaacatcgc agcctcgtgt atcacggcaa
      961 gtcgctcggg atgggagcac ttccccctcc tgccccttgt gtttacctgc tatcatgtcg
     1021 cgtatggcgt tggattcctg ctagggctag tggattttgt cattctgcga cgtcgatcgc
     1081 atcagctctt taccgcgctg acccgcacct gagtgggcac ctgctcactc aggatgatag
     1141 tgggccgata agagatcgag ctcattttgg cccctgaagc ccccgcgcgc cgggtgctga
     1201 gtctctgccg cctgtatgcc ggcatgcgag cgatcggcgt cacactgcag gaggctctgt
     1261 ggcaaaaacc gccagtgatc tggtgcaagg atcagttcgc cgttgacccc agatcactgg
     1321 agacctgcca tgagcgatct ctccctcttt actggcctgc ccgtaaagag ctacagtcca
     1381 gcccctgcaa cacagccttt gaggatgcgc ggcttacggc gcacgcgttt caccgcggta
     1441 cggagttcat cacggagatg ccgcaggtcg aaacagcaca cattccgcaa ctcgacgcct
     1501 ttgagctgtt gccag
//
LOCUS       DASQSL010000164         1430 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_179856, whole genome shotgun sequence.
ACCESSION   DASQSL010000164 DASQSL010000000
VERSION     DASQSL010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1430
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179856"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            293..>1430
                     /gene="glf"
                     /locus_tag="VE844_01675"
     CDS             293..>1430
                     /gene="glf"
                     /locus_tag="VE844_01675"
                     /EC_number="5.4.99.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009195123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008767 - UDP-galactopyranose mutase
                     activity [Evidence IEA];
                     GO_process: GO:0009273 - peptidoglycan-based cell wall
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-galactopyranose mutase"
                     /protein_id="HZC00104.1"
                     /translation="MFDYLIVGAGFAGATLAERLATKCDKRVLLVEQRPHIGGNAYDY
                     YNQHGLLIHKYGPHIFHTNAKRVFDYLSQFTDWRPYEHRVRASVDGQVVPIPINLDTI
                     NRLYGLSLNAFQVEEFFQKVAEPREQIRTSEDVVVSRVGQELYRKFFRGYTRKQWDLD
                     PSELDSSVISRVPIRTNRDDRYFTDTFQAMPLHGYTRMFERMLEHPNIKLMLNTSYRE
                     IQGIIPYREMIYTGPIDEFFDLCYGKLPYRSLHFRHETIDAERYQEAPVINYPNEHPY
                     TRITEFKYLTGQRHPKTAIVYEFPRAEGDPYYPIPCPENTVLYSKYQALAERTPRVHF
                     VGRLATYKYYNMDQVTAQALTLFDRLAGTGDKVLKGPVRGSTRRT"
BASE COUNT          325 a          426 c          395 g          284 t
ORIGIN      
        1 cacgtcatcg acccgccgtt atggcgccaa aacggaggga gatcatacct cagttggccc
       61 gcaaaaaaaa tttgcgacag atccagcgcg tgacgacacg aggcgtgaag ccgggtgagg
      121 tgcgaaaatg cgtgcggtgc tgaagagcac gtcgtggggt gtgactgtaa ccgcaatgca
      181 gcgattaatc ggggaggcac gggaaaggag gcgctcctcg gcttctaact gggctgcctc
      241 ttgacagacg tccttgtacc tttctggccg tgcttacctt cggaggcatc ttatgttcga
      301 ttaccttatc gtcggggcgg ggtttgccgg ggctactctg gcggaacgct tggcaactaa
      361 gtgtgataag agggttttgc tggtcgagca acgcccgcat atcggtggca acgcctatga
      421 ttactacaac caacatgggc tgctcatcca caagtacggc ccccacatct tccacaccaa
      481 cgccaagcgc gtttttgatt acctctcaca gtttaccgac tggcgtccct acgagcaccg
      541 cgtccgtgcc agtgtcgacg gccaagtcgt cccgatcccg atcaacctgg acacgatcaa
      601 ccggctctat gggctcagcc tgaacgcctt tcaagtggaa gaattctttc agaaggtggc
      661 cgagccgcgt gagcagatcc gcacgagcga agatgtggtg gtgagccggg tggggcaaga
      721 gctctaccgc aagtttttcc ggggctacac gcgtaagcaa tgggaccttg acccatctga
      781 gctggactcg tcagtcatct cgcgcgtccc gatccgcacg aaccgcgacg accgctactt
      841 taccgacacg tttcaggcga tgccgctcca cggttacacg cggatgttcg agcggatgct
      901 ggagcatcca aacatcaagc tcatgctcaa caccagctat cgggagattc agggtatcat
      961 cccgtatagg gaaatgatct ataccggtcc tattgacgaa ttcttcgacc tctgctacgg
     1021 aaagctgccc taccgttccc tccacttccg gcacgagacc atcgacgccg agcggtacca
     1081 agaagcgccg gtcatcaact atccgaacga gcacccgtac acccggatca ccgaattcaa
     1141 gtatttgacc gggcagaggc acccgaagac cgcgattgtg tacgagtttc cgcgtgccga
     1201 gggggacccg tattacccaa tcccgtgtcc cgagaataca gtactctaca gcaagtacca
     1261 agcactcgcc gagcgcacac cacgcgtaca cttcgtggga cgacttgcca cgtataagta
     1321 ttacaacatg gatcaggtga cggctcaggc cctcaccctt tttgataggc tcgccggcac
     1381 aggagacaag gtcctcaaag ggccggtacg tggcagcacg cgccggacta
//
LOCUS       DASQSL010000165         2005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_125014, whole genome shotgun sequence.
ACCESSION   DASQSL010000165 DASQSL010000000
VERSION     DASQSL010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125014"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..488)
                     /locus_tag="VE844_01680"
     CDS             complement(<1..488)
                     /locus_tag="VE844_01680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002814260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HZC00105.1"
                     /translation="MIQLHLSDIARPLQAVLTGQDVEFCGCSTDTRTLQPAELFIALK
                     GERFDGHGFVAQARESGAAAAMLEHPVDVALPALVVGNTRVALGQLAALWRSRFTVPI
                     VAVTGSNGKTTVKEMLAAILSLKGAVLATRGNLNNDIGVPQTLCRLGGQHDYAVIELG
                     AN"
     gene            complement(485..>2005)
                     /locus_tag="VE844_01685"
     CDS             complement(485..>2005)
                     /locus_tag="VE844_01685"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: protein motif:HMM:NF001124.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HZC00106.1"
                     /translation="MKAPIRHGRGVRLSELLVGIATYPAAPDRSRVTGLAMDSRQVQA
                     GDCFLACQGTLQHGREYIDQALKLGAGAVLIEAGHPLTSTSPTGAVPWIVVPDLRAQA
                     GIIADRFYGRPSAALLIIGVTGTNGKTSISHFIAQAVNDTWRRGPCGVLGTLGYGLLP
                     RLESATTTTPDPITLHRLLAELRDRQARSVVLEVSSHGLEQGRVAGIKFAIAVFTNLS
                     RDHLDYHGSMEAYGQAKLRLFQRPGLRTAVINLDDPFGQAILTGLPSGVRVLGYTLGP
                     TAAGACPAVGATHLAISKQGVMMEIVAPSGRGILRSPLLGRFNAYNLLAALAVLLELG
                     IPLDEALERLARVTSVAGRMECLQRDPWVVVDYAHTPQGLEQALRTLREVCSGRLWCV
                     FGCGGERDSGKRPLMGQVAEALADQIIVTTDNPRSEAPAVIVQGILSGIKHKDRVCIE
                     LDRAKAIEQALLHAHEEDTVLVAGKGHETYQEIRGRRLPFSDSEVVRRVIVRRACA"
BASE COUNT          411 a          637 c          582 g          375 t
ORIGIN      
        1 tgattggcgc cgagctcaat cacggcgtag tcgtgttgcc ccccgagcct acagagggtt
       61 tgcggcaccc caatatcgtt gttgagattc ccccgggtag cgaggaccgc gcctttcaga
      121 gagagtatcg cagccaacat ctctttgacg gtagtttttc cattgctccc ggtgacggcg
      181 acgatcggga ctgtaaaccg gctacgccac agagccgcca gctgcccaag cgccacccgg
      241 gtattgccaa ccacgagcgc aggcaaggcc acatcgactg ggtgttcgag catagctgca
      301 gcggcgccgc tctctcgggc ctgggccaca aaaccgtggc catcgaagcg ctctcccttg
      361 agagcgataa ataactcggc cggctgcagg gtgcgggtgt cggtgctgca tccgcaaaat
      421 tcgacatcct gtcctgtcag caccgcttgc aatggccgag cgatgtcaga aagatggagc
      481 tgaatcatgc gcaggcccgc ctcacgatca cgcgacgcac cacctcacta tcgctaaagg
      541 gcaagcgccg acctcggatc tcctgatagg tctcatggcc cttgcctgcg accagtacgg
      601 tgtcctcttc atgcgcgtgt aacagcgcct gctcgatggc cttggcgcga tcgagctcga
      661 tgcagacccg atctttatgc tttataccgg acaggatccc ttgaacgatc acggcaggcg
      721 cttcgctacg cgggttatca gtggtcacta tgatttgatc ggccagcgct tccgccacct
      781 gccccatgag cggtcgtttg ccgctatccc gctcgccgcc acagccaaat acgcaccaca
      841 gccgcccgct gcaaacctcg cgtaaggtcc gcaaggcctg ctccaaaccc tgcggggtat
      901 gggcgtaatc gacgacgacc caaggatctc tctgcaaaca ctccatccgc ccggctacgg
      961 aagtaacccg agcgagcctt tccagggcct catcgagcgg tatcccgagc tcgagcaaaa
     1021 ccgccagggc agcgagcaga ttgtatgcat taaaacgccc aagcaatggg ctccttaata
     1081 taccgcggcc ggaaggagcc acgatctcca tcatcacccc ctgtttgctt atagccaggt
     1141 gagtagcacc gaccgcaggg caggcgccag cggctgttgg cccaagcgta tagccgagca
     1201 cccgcacacc gcttggcagt ccggtgagga tcgcttggcc aaacggatcg tcgagattga
     1261 tcaccgctgt acgcaggcct ggcctttgga acaggcggag cttggcttga ccataggcct
     1321 ccatggaacc gtgataatcc aggtgatcgc ggcttagatt ggtaaacacc gctatagcaa
     1381 acttgatccc ggccactcgc ccctgttcta ggccatgaga ggatacctcg agcactaccg
     1441 agcgcgcctg ccgatcccgc agctcggcca atagacggtg aagggtgatg ggatcgggcg
     1501 tagtcgttgt cgccgattcg agtctgggca atagcccata ccccaaggtg ccgagtacgc
     1561 cacagggccc tctcctccag gtatcgttca cggcttgagc gataaaatgg ctgatcgagg
     1621 tcttgccatt ggtgccggtc accccaatga tgagcagggc cgcggagggg cgtccataaa
     1681 accggtcggc gatgatcccg gcctgggccc gcagatcggg gacgacgatc caggggaccg
     1741 cgccggttgg ggaagtagaa gtaagggggt ggcctgcttc tatgagcacc gctcccgctc
     1801 cgagcttgag cgcctgatcg atatactccc tgccatgctg gagggtacct tggcaggcca
     1861 ggaaacaatc acccgcttgg acctggcggc tgtccatagc gagcccggtg accctgctac
     1921 gatccggtgc ggcaggataa gtagcaatac ccaccaaaag ctcgctcaag cggactcccc
     1981 tgccgtgtcg gatcggcgct ttcat
//
LOCUS       DASQSL010000166         1803 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_42504, whole genome shotgun sequence.
ACCESSION   DASQSL010000166 DASQSL010000000
VERSION     DASQSL010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1803)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1803)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1803
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42504"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..231
                     /locus_tag="VE844_01690"
     CDS             <1..231
                     /locus_tag="VE844_01690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC00107.1"
                     /translation="TRHGKTYRRVLLRNSYRFNGQVRHDTLANLSHCSDEEIRAIKLA
                     LKHKGQLTHVGDLREEVGTRQGLAVGAVWVLH"
     gene            244..465
                     /locus_tag="VE844_01695"
     CDS             244..465
                     /locus_tag="VE844_01695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00108.1"
                     /translation="MGLVKALGQSRTAKLALWLVLASVIAHGWGLAAVCWAQQHAVCD
                     LLGLEAFNEDDLYQAMEWLDEQQLALEEA"
     gene            640..1236
                     /locus_tag="VE844_01700"
     CDS             640..1236
                     /locus_tag="VE844_01700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00109.1"
                     /translation="MEVVAGTTPAPKTFKAQIDKRVQCFGVKRVSWVGDRGMIKTGQI
                     SDLKEAGFHSLTAITKPQIQALLKTELLRLAMFEVRDSVRGNPQRADERAAVRQSKRE
                     RLDTYLAQKNAYLADPPHAKVETALKPTNSSSMLGPSSTWRKEDSLLRSTKAPKGRRH
                     GWTAAMGSRPIGSRKWLHRKPPTPLTRAWPKSNRHPAP"
     gene            1245..1580
                     /locus_tag="VE844_01705"
     CDS             1245..1580
                     /locus_tag="VE844_01705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00110.1"
                     /translation="MLEMRGFFVRKAPRTRAHVLVIMLAYLLAYQLRRLWHEVELTGE
                     EGIAELASICAIELTLPNHTTCQVIPEPPPLGKLLLEKADITLPDAIPHQGITVVTRK
                     KWVPQRKSI"
     gene            1618..>1803
                     /locus_tag="VE844_01710"
     CDS             1618..>1803
                     /locus_tag="VE844_01710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZC00111.1"
                     /translation="MEDPFQYAAFNVGYFETEHLNQIFKDICAAIHTGGFIMLTGPMG
                     SGKTAALLRVRRALQEDK"
BASE COUNT          393 a          515 c          538 g          357 t
ORIGIN      
        1 acccgccacg gcaaaaccta ccggcgtgtg cttttgcgta actcctaccg gttcaacggt
       61 caagtgcgtc atgacaccct ggccaattta tcgcactgct ccgatgagga aatccgggcc
      121 attaagctgg ccctcaaaca caaaggccag ttgacccacg tgggggacct ccgtgaggag
      181 gtaggcaccc ggcagggttt ggcggtaggc gccgtctggg tcttacacta gttagccaag
      241 cggttgggac tggtcaaggc gttgggtcaa agccgcaccg cgaaattggc gttatggctg
      301 gtcttggcga gcgtcattgc gcacggctgg gggttggctg cggtgtgctg ggcgcaacag
      361 catgcggtgt gtgacctcct ggggcttgag gccttcaacg aggacgattt gtatcaggcg
      421 atggagtggc tcgatgagca gcagctcgcc ctggaagagg cctgatttac ccaccgctag
      481 gccactgcgg gccaggcgcc aacgcggtat ctatacgatg tcaccagcac ttacctcgaa
      541 ggggatcgga aggagttggg cgagtagggc tataaccgcg atggcaagaa accgattgtc
      601 attggcctgt tgaccgatga agagggctgg ccgattaggg tggaggtagt tgccggcacc
      661 accccggctc ccaagacctt caaagcccaa atcgacaaga gggtgcagtg ctttggcgtc
      721 aagcgggtca gctgggtggg tgaccgaggg atgatcaaaa ctgggcagat cagcgacttg
      781 aaagaggcgg gctttcattc cctcaccgcg atcaccaaac cccaaatcca ggccttactc
      841 aagacggagc tcttgcggtt ggcaatgttt gaggtgcgag atagcgtgcg gggtaatcca
      901 cagcgggccg acgagcgggc cgcggtgcgt caaagtaagc gtgagcgctt ggacacctat
      961 ctggcgcaga aaaacgctta tctggccgac cctccgcatg ccaaggtgga aacggcgtta
     1021 aagccaacca actcaagctc catgcttggg ccaagctcaa cgtggaggaa agaagactcg
     1081 ctcttgcggt cgacgaaggc gcccaaaggg cggcgacacg gttggacggc tgctatgggc
     1141 tcaagaccga tcggctcccg gaagtggctt catcggaaac cgcccacgcc ccttacaagg
     1201 gcttggccga agtcgaatag gcatcccgca ccctgaaaac cactttgctg gaaatgcgcg
     1261 gcttctttgt ccgcaaggct ccccgtacgc gcgctcatgt cttggtaatc atgttagcct
     1321 atctcctggc gtatcaactg cgccgactct ggcatgaggt tgagctcact ggcgaggagg
     1381 ggatcgcgga actcgcttcg atttgtgcca tcgagctcac cctccccaac cacaccacct
     1441 gccaggtgat ccccgagccc cctcccttag gcaagctctt gcttgagaag gccgacatca
     1501 cccttcctga cgccattccc caccagggga tcactgtagt cactagaaaa aaatgggtcc
     1561 cacagcgtaa atctatttaa tatcaggccg ttatagccca tcttttggaa cgctgttgtg
     1621 gaagatccgt ttcaatacgc cgctttcaac gtgggctact tcgagaccga gcacctcaat
     1681 cagatcttca aagatatctg tgccgccatc cacacgggcg ggttcatcat gctgaccggg
     1741 ccaatgggca gtggtaagac tgctgctctg ctgcgcgtcc gccgcgcatt gcaggaagac
     1801 aag
//
LOCUS       DASQSL010000167         1481 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_138635, whole genome shotgun sequence.
ACCESSION   DASQSL010000167 DASQSL010000000
VERSION     DASQSL010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1481)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1481)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1481
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138635"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(110..>1481)
                     /locus_tag="VE844_01715"
     CDS             complement(110..>1481)
                     /locus_tag="VE844_01715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015743439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate synthase-related protein"
                     /protein_id="HZC00112.1"
                     /translation="IKHGGVPWELGLAETQQVLVMNKLRDRIVVQVDGQMKTGRDVVI
                     AALLGAEEYGFATAPLVVMGCIMMRVCHLNTCPVGIATQDPELRQRFSGQPEFVENFF
                     RYIAEEAREYMAKLGFRSMDELIGRVDRLEVKQAVDHWKARGLDFSNILYQPRMGPEV
                     AIRKVREQDHGLERSLDRTTIVPLCREALEHKRPVDIILPIKNIHRTVGTILGYEITR
                     RHGAAGLPEDTIRIHFTGSAGQSFGAFVPKGVTFTLEGDANDYLGKGLSGGKIIVYPP
                     RHASFVPEQNILIGNVVLYGATGGEAYFRGIAGERFAVRNSGVRAVVEGVGDHGCEYM
                     TGGRVVVIGPTGRNFAAGMSGGIAYVLDLEGNFKLRCNLGMVVLEPLVENLEEVDTVK
                     EMLSRHVRYTQSTAAQRILANWKTLQARFVKVMPKDYKRVLAAIIKAQAIGIPEDRAV
                     MEAAHG"
BASE COUNT          307 a          514 c          372 g          288 t
ORIGIN      
        1 gagcacctcc tctggccagg gctgcatcac ctgacgccaa tcccggatcc gctcctcaat
       61 cggtcgataa ggttgcttcg tgcgcttgaa ttcgacaaaa ccggtaacct tacccatggg
      121 cagcctccat caccgctcta tcctcgggga tcccgatagc ctgggcctta ataatcgcgg
      181 ctaacacgcg cttgtagtcc ttgggcatca ccttgacgaa tcgtgcctgg agcgtcttcc
      241 aattggccag gatccgctga gcggccgtgc tctgggtgta ccgcacatgg cggctcagca
      301 tctccttgac cgtatcgacc tcctctaaat tctcaacaag cggctccaga accaccatcc
      361 ccagattgca gcgcagcttg aaattacctt ccagatccag cacataggct ataccgcccg
      421 acatccccgc ggcgaagttg cggccggtcg gtccgatcac caccacccgc ccgccggtca
      481 tgtattcgca accgtgatcg cccacccctt caaccaccgc acggacaccg ctgtttctca
      541 ccgcaaaccg ctccccggcg atcccccgga aataggcctc accgcccgtt gctccataga
      601 gcacgacatt gccgatcaag atgttctgct caggcacaaa gctcgcatgg cgaggcggat
      661 aaacaatgat cttacccccc gataacccct tgcccagata atcgttggca tcgccctcaa
      721 gcgtgaaggt cacgcccttt ggcacaaagg cgccaaagct ctggcccgcg gagccggtaa
      781 aatgaatgcg gatggtatcc tcaggcaggc ccgctgcacc atggcgccgg gtgatctcat
      841 aacccagtat cgtgccgacc gtgcggtgga tgttcttgat ggggaggatg atatcgaccg
      901 gccgcttatg ctcgagggcc tcacggcata agggcacgat ggtcgtccta tcgagcgacc
      961 tctcgagccc gtggtcctgc tcccgcacct tgcgtatagc cacctccggt cccatcctgg
     1021 gctgatagag gatgttcgaa aaatcgagac cccgggcctt ccagtgatcc acggcctgct
     1081 tgacctcgag cctatcgacc cgcccgatca gctcgtccat gctccgaaaa ccgagcttgg
     1141 ccatatactc gcgcgcttcc tcggcaatat accggaaaaa attctcgaca aactcgggct
     1201 gaccgctgaa ccgctggcgc agctccgggt cctgagtggc aatgcctacc ggacaggtat
     1261 tgagatgaca gacccgcatc ataatgcacc ccatgaccac taagggtgcg gtggcaaagc
     1321 catactcctc ggcacccagc aaggcggcga tgaccacatc gcggccggtc ttcatctggc
     1381 cgtccacctg caccacgatc cgatcccgga gcttattcat gaccagtacc tgctgggtct
     1441 cggccagccc caattcccac ggcacgcccc catgcttgat c
//
LOCUS       DASQSL010000168         1821 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_138640, whole genome shotgun sequence.
ACCESSION   DASQSL010000168 DASQSL010000000
VERSION     DASQSL010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138640"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            294..>1821
                     /locus_tag="VE844_01720"
     CDS             294..>1821
                     /locus_tag="VE844_01720"
                     /inference="COORDINATES: protein motif:HMM:NF012350.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HZC00113.1"
                     /translation="MVLKSSRTHGLASSPAAQRLKQYGLNRLPEAVPRSALSILLNQF
                     KSLPVLLLGASAVVSVFTGGFADAVVILSVVLINAGIGFFTESQAEKTINALTSMVRR
                     SALVLRDGRLEELPAEQIVPGDVLTLAPGSYVAADARLLEIRNLTVDESALTGESHPV
                     LKSPERLYQEDVPLADRLNMVYMGTMVTGGSGLAVVVGTGKYTEIGAIQALMGETRPP
                     ETPMQRQLDQLGNQMVLMSGAVCGLMFVIGLLRGYGFTQMLMASVSLAVAAVLEGLPT
                     VAITTLALGLRTMRRHHVLIRRLEAVETLGSVQVICMDKTGTLTMNRMSVLSLYAGMK
                     RITVTDGALFGAQGRVSPYVNDGLLRLIHVAVLCNETEVKGAQGAYVLNGTGTERALM
                     QLAINSGVAVSQLRRQYPLLKVEYRAENRNYMSTLHATEAGTQLLAVKGSPSEVLALC
                     RSYVKDGVKYELTEADRAAILNENERMAAEALRVLGFAYGEDGIDIRQRSLVWLGLTG
                     M"
BASE COUNT          386 a          512 c          545 g          378 t
ORIGIN      
        1 ttcaagagat cattacggcc atcgatcggc tcattcaagc cattgttcag ctgagagatg
       61 catctcaaag ctccacaatg gctgatccca agccaaccgc actacctaag ggtatcgctt
      121 cccaccataa aaccaaatcc cagtctcaac attttaagcc cgttcctcgc tcttcacccc
      181 caccccttcc ctccccttta ccaaggggga gggtgaggga aggggtccct ccccgcatag
      241 cccctacccc atcaccccag ccctggcatc tccttgatgc cgaggaggta gtgatggttc
      301 tcaagagttc cagaacgcac ggactggcaa gctccccggc tgctcaaagg ctcaagcagt
      361 atggtctcaa ccgcctaccc gaagcggtgc cgcgctcggc cttgagcatc cttctcaatc
      421 agttcaagag tctgccggta ttattgctgg gtgcttccgc agtcgtatcg gtattcacgg
      481 gtgggtttgc ggatgctgtg gtgatcctat cggtggtgct aatcaatgcg ggcatcggct
      541 ttttcacaga gagccaggca gagaagacca tcaatgcttt aaccagcatg gtgcggcgtt
      601 ccgcactcgt gctgagagat ggtagactcg aggaattacc cgcagaacag atcgtaccag
      661 gggatgtctt gacgcttgca ccaggaagct atgtcgcggc cgacgccaga ctactggaga
      721 tcaggaacct taccgtggat gaatccgcgc tcactgggga gagccatccg gtgttgaaat
      781 ctcccgagcg gctttatcag gaggacgtgc ccctagccga taggctgaac atggtctata
      841 tgggcacgat ggtgaccggc gggagcggct tggcggtcgt ggtggggacc ggtaagtata
      901 cagagatcgg tgctatccag gcgctcatgg gcgagactcg gccacctgag acccctatgc
      961 aaaggcagtt ggaccaactc gggaaccaga tggtgctcat gagcggagcc gtctgcgggc
     1021 ttatgtttgt gatcggattg ctgcgaggct atggttttac tcagatgctc atggcctcag
     1081 tatccctggc ggtcgctgca gtgctcgagg gtctgcccac ggtagccatc accacgctgg
     1141 ccctcgggct gcgcaccatg cgcaggcacc acgtgttgat ccggcgcctc gaggcggtcg
     1201 agaccttggg ctcggtccag gtgatctgca tggacaagac cggaacgctg accatgaacc
     1261 ggatgtcggt actctcactc tacgcgggca tgaagcgcat caccgtcaca gacggggcct
     1321 tatttggcgc acaagggagg gtcagtccat acgtcaacga tggattactc cggctcatcc
     1381 atgtagcggt gttgtgcaac gagacggagg taaagggtgc gcagggggcc tatgtgttga
     1441 acggcacagg cacagagcgc gccctcatgc agctggccat caacagcggt gtggccgtga
     1501 gccagttacg ccgccagtac cctcttctca aggtggagta ccgtgccgag aatcgcaatt
     1561 acatgagcac cctgcatgcg actgaagccg gaacacagct tttagcggtc aaaggaagcc
     1621 cgagcgaggt cctggcgctg tgccgctctt atgtcaaaga cggggtcaag tatgaactga
     1681 ctgaggcgga tcgggccgcg atacttaatg aaaatgaacg tatggccgcc gaggcgctgc
     1741 gggtccttgg cttcgcctat ggtgaggatg gtatcgacat tcggcaaagg agtcttgtat
     1801 ggctagggct caccgggatg g
//
LOCUS       DASQSL010000169         1090 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_15302, whole genome shotgun sequence.
ACCESSION   DASQSL010000169 DASQSL010000000
VERSION     DASQSL010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15302"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..387)
                     /locus_tag="VE844_01725"
     rRNA            complement(<1..387)
                     /locus_tag="VE844_01725"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            complement(780..855)
                     /locus_tag="VE844_01730"
     tRNA            complement(780..855)
                     /locus_tag="VE844_01730"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(820..822),aa:Ala,seq:tgc)
     gene            complement(985..1061)
                     /locus_tag="VE844_01735"
     tRNA            complement(985..1061)
                     /locus_tag="VE844_01735"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1025..1027),aa:Ile,seq:gat)
BASE COUNT          218 a          334 c          277 g          261 t
ORIGIN      
        1 ggctgtcacc cgctctggcc gatcgttcca gatcgttcga ctatcgtgct gattggtaac
       61 tcgctggctt taaaccagac aggccctaca accccatcgt gcaagcacga tggtttgggc
      121 tgttccgcgt tcgctcgccg ctactagcgg aatcactatt gttttctgtt cctgcaggta
      181 ctgagatggt tcacttccct gcgttgtctt ccaccggcct atggattcag ccggggatac
      241 ctcgacatga ctcgaggtgg gttgccccat tcggacatcc ccgggtcgaa gcttgtttgc
      301 agctcaccgg ggcttttcgc agcttgccac gtccttcatc gacttctggc gccaaggcat
      361 tcaccgtaca cccttagtag cttgaccata agaaactcga aactgacgct caccaaccgt
      421 ttgcatatcg attggtctgc gacagttcct tgcaacactg cgtgtgttgt ggtcggaaaa
      481 aactaccgtg tgcagaatat tcagttgtca aagatcaggc ttgccgggct ctgccggcaa
      541 tctgattacg tcggctcggt cggctcgcca ctcgcgcagc gctctcaact tccccgacgt
      601 cggcgtgcgc gagactcaac agcctcattc gctcaccgaa acttttcaaa tacccacgga
      661 ttagttatga cgccgctaac ccgctgtcgg tctcaaccga cgaaaacttt ttttcagccc
      721 gtcacgttcg ctgaactggc ttgccaaccg ctcctcgtcc aggtgcgacg agcgaaggtt
      781 ggtggagaat accggtctcg aaccggtgac ctcctggttg caaaccaggc gctctcccag
      841 ctgagctaat tccccgagtc ggtcaattgt gaggtgctgt taacgtgcgc ggtgggtcaa
      901 atcggagggc gttcgacgat cgctcgcatc ctcgtaccga cacagcgcac taggcactac
      961 tcaatacgcg actcctttga agactggtgg gcctgggtag attcgaacta ccgaccccac
     1021 gcttatcaag cgtgtgctct aaccagctga gctacaggcc cactaagcac gccgcttgtt
     1081 caaagagcca
//
LOCUS       DASQSL010000170         1142 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_125043, whole genome shotgun sequence.
ACCESSION   DASQSL010000170 DASQSL010000000
VERSION     DASQSL010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125043"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..135)
                     /locus_tag="VE844_01740"
     CDS             complement(<1..135)
                     /locus_tag="VE844_01740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018187085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HZC00114.1"
                     /translation="MPHYKYLIIGGGMAADAAVRGIREVDANGTIGLISAEPDPPYDR
                     P"
     gene            624..971
                     /locus_tag="VE844_01745"
     CDS             624..971
                     /locus_tag="VE844_01745"
                     /inference="COORDINATES: protein motif:HMM:NF012354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HZC00115.1"
                     /translation="MDIELARTFLKVIKAGNFVSAADDLHITQAAVSRRIKAAEGYSG
                     VSCSCAIKPARCSPRLAGGFRSTLSSSVRALGQARHEIGVQALGHCVLCLGFTVLFTT
                     PTKVLNQLHAARA"
BASE COUNT          265 a          339 c          294 g          244 t
ORIGIN      
        1 tggacggtcg tagggtgggt caggctcggc cgagataaga ccaatcgtcc cgttggcgtc
       61 tacctcacgg atgccccgga cagccgcatc cgcagccatc ccaccaccga tgatcaagta
      121 tttgtagtgt ggcatttctc gtctcctaac ccggctgttg gctttatctc ggagcagaac
      181 cgttattgac attcatcgcg taggcgcctc tgctccgact aaagcgacct caggtattcg
      241 accagaccgc gacggaatgt ctaacaacat cagtgtacag acccctagtc cagatacgat
      301 gctgtgtttc gctagaccgt actccagacc cggtccagag acccttcaca gcctttttta
      361 aagccgcggt ggatcagact caacaggaac aagaccaatt agtacggtcg acatccaccc
      421 ccgaacgcta cgacggggga agctcgcagc gatgactgcg cgccctatga cgattcagtt
      481 cagatcctag accgctttcc atcacctagg ccccggaaca ttgtggttaa tctaagctta
      541 agccaatttt ttatgttaca caaacgacaa atattaggat aatatattta ttagccatgt
      601 aaaatgtttg caaaggtgtg gtcatggata tcgagttagc tcgaaccttt ctcaaagtga
      661 tcaaggcggg taatttcgtg agcgccgccg atgacctcca tatcacgcag gctgccgtaa
      721 gccggcgcat caaggcagcg gaggggtatt cgggtgtaag ctgttcgtgc gcaataaagc
      781 cggcgcggtg ctcacctcgg ctggcaggcg gtttcagaag cacgctgtca agctccgtgc
      841 gcgccttggg gcaagcacgt cacgagatcg gcgtccaggc gctaggacat tgcgtgctgt
      901 gtctcggctt cacagtactc tttaccacgc caaccaaagt gctcaaccaa ctccacgccg
      961 cacgtgccta gctcgtgcgg tcgtcacgac gcgttccagc caagcggcct taaccctacc
     1021 caacatgcat tcgcacgagg agacaatatg gacacgcaac tctatccgcc catcagcggg
     1081 gaactcgcac gcaagcgggc gcagctcgcg ccggaaatct ccgccgcgtt caaggctttc
     1141 ag
//
LOCUS       DASQSL010000171         1715 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_15328, whole genome shotgun sequence.
ACCESSION   DASQSL010000171 DASQSL010000000
VERSION     DASQSL010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15328"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(150..1625)
                     /locus_tag="VE844_01750"
     CDS             complement(150..1625)
                     /locus_tag="VE844_01750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00116.1"
                     /translation="MIHPTPTKTLLTTTFESLVMQLSGLLARGTRLLERFVHAEPRPE
                     TTMAFERELSDLLREVGRRIMAWTLNRLEPNADNEAPLRVSFEGCLYRRRRQHPHVVG
                     TLFGPVTLWRRLYEPLGHRGRSIHPLELRLGIEAGLATPALAERVGYCATDHTQNEVL
                     ELVQRDHGVSWSCTSLRKLLGCLREGMAPHREGAQVEQVLGWIEQARASKGRFRPTLS
                     VGRDGIFVPLRGGVAQEGATATVSVLDRRGKRVGTVYLGQMPESGQGTITDQLSDLLK
                     AILTQVDSQSLRLVYVSDEGHHPSTYYHQVLNKMVDPRRPWRQLEWRRIVDFYHACQY
                     VQQLADTIFGAGVEAQNWAKSMRHVLKTQADGGARVLKSASALRRRRGLFGQAKLYHK
                     AYRYLKRRSAWMKYALYRRQKLPIGSGITEAACKVVLTQRLKRSGMSWTIAGGQVILD
                     LRVIRLSGVWHAVHQRYLASKPLPVTCVDTANTAQQQPLAA"
BASE COUNT          340 a          529 c          505 g          341 t
ORIGIN      
        1 tggctcttgg gattggtatc gaaacatcct cttaccgctc cgaattgcgc gatgcctttc
       61 gcactcatca gccggtcgag ccgcgccatc aacgaatcat gaagcgtgtc aggaatcgtg
      121 aagggtgtga tcgctccatt cccgctcccc tatgccgcca atggctgttg ttgagcggtg
      181 ttggccgtgt cgacacacgt gaccggaagc ggttttgagg ccaagtagcg ctggtggacc
      241 gcatgccaga caccgctcaa ccggatcacg cgcaggtcca agatcacctg tccgcccgca
      301 atcgtccacg acatgcccga gcgtttgagc cgctgcgtca acacgacctt gcacgcggct
      361 tccgttatac cgctgccgat cggcaatttt tggcgccggt aaagcgcata cttcatccaa
      421 gcactgcgcc ttttgaggta gcgataggct ttatggtaaa gcttggcctg gccaaacaga
      481 ccccgacgcc gacgcagcgc tgatgcggac ttcaacaccc gtgccccccc atcggcctgg
      541 gtcttgagca catgacgcat cgacttggcc caattctgag cctcgactcc cgccccgaag
      601 atcgtgtcag ccagttgctg gacgtattga caagcatgat aaaaatcgac gatccgtctc
      661 cactcgagtt gacgccaggg acggcgtggg tccaccatct tgttgagaac ctgatggtaa
      721 taggtgcttg ggtgatggcc ctcatcgctg acatagacca aacgtaggct ctgactatcg
      781 acctgagtga gaatcgcttt gagcagatca ctgagctgat ccgtgatcgt tccctgaccg
      841 gattcgggca tctgccccag ataaacggtc cccacccgtt tgcccctgcg gtcgagcacg
      901 gagaccgtgg ccgtggcccc ctcttgtgcc acgcccccac gcagcggcac aaagatgccg
      961 tcgcgcccaa ctgatagggt cggccgaaag cgccccttag aggcgcgggc ctgctcgatc
     1021 cagcccaaca cctgctccac ctgggcacct tctcgatgcg gggccatccc ctcacgcaga
     1081 caccccagga gtttgcgaag ggaggtacat gaccacgaaa cgccgtggtc tcgctggacc
     1141 agctcgagca cctcgttttg ggtgtggtcg gtggcgcaat agcccacgcg ctcggctaga
     1201 gccggggtgg ctaagcctgc ttcgatcccc aggcgcagct ctagaggatg gatggagcgc
     1261 cctcgatggc caaggggttc gtagagtcgg cgccataggg tcaccggccc aaagagcgtg
     1321 cctacgacat gagggtgttg gcggcggcgg cgatagagac aaccctcgaa cgatacccgc
     1381 aacggggcct cgttgtcggc gttgggctcg agtcggttga gggtccacgc catgatccgt
     1441 cgtccaacct cgcgaagcag gtcactgagc tcgcgttcaa acgccatggt ggtttcgggc
     1501 ctcggctcgg cgtggacaaa ccgctcaagg agccgggtgc cccgggcgag caagcccgaa
     1561 agctgcatga cgagagattc aaaggtcgtt gtcaacaggg tcttggttgg cgtaggatgg
     1621 atcattgagg ggctccaagg gggtgtcatg atagagatcg gaattttcca tcatttcacc
     1681 aaaggtgccc ctcatcagca accttctttt cccat
//
LOCUS       DASQSL010000172         1389 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_70011, whole genome shotgun sequence.
ACCESSION   DASQSL010000172 DASQSL010000000
VERSION     DASQSL010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1389
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70011"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(229..>1389)
                     /locus_tag="VE844_01755"
     CDS             complement(229..>1389)
                     /locus_tag="VE844_01755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006786251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZC00117.1"
                     /translation="VQGPPEAIAAHSSSLTGQYLSGRRRIPLPARRTPYDPARVLRIE
                     GASGNNLKQIDVEIPLGLITGVTGVSGSGKSTLVNDTLYRWAARWLNRAHLEPMPCRE
                     IEGLERLDKVVDIDQSPIGRTPRSNPATYTGVFTPIRELFAATPEARSRGYSPGRFSF
                     NVKGGRCEACQGDGVIKVEMHFLPDIYVECDVCKSKRYNRETLDIRYKGKNIAEVLEM
                     TVEEARRFFDPVPPVANKLQTLMEVGLSYIKLGQNATTLSGGEAQRVKLARELSRRDT
                     GATLYILDEPTTGLHFYDIEQLLKVLHRLRDHGNTVVVIEHNLEVIKTADWIIDLGPE
                     GGDRGGEIVAVGTPEAIAENPCSYTGQYLAPVLRNPGTLATALISQRLARGV"
BASE COUNT          269 a          424 c          415 g          281 t
ORIGIN      
        1 aaggagcatc catcagattc acgttgacag agttactacg cttacccagc gcaatccgct
       61 gattcgtttc aagcgtcggt atttctggga ggacgtcgcg ctcttggtca agcagtgcac
      121 tggactgacc attggcgtgc atcgtaatta ccgggtgatc aagtaggggc tcacagcatc
      181 ccagctcaca agatttccca tgggaatggc ggcattgaca tctctttttc acacccccct
      241 ggcgagccgc tgactgataa gcgcagtagc cagggtaccc gggttcctga gcaccggtgc
      301 aagatactgc ccggtatagg aacaggggtt ttcggcgatc gcttcggggg tccccacggc
      361 gacgatctca ccgccccgat ccccaccctc ggggccgaga tcgatgatcc aatccgccgt
      421 cttgatcacc tccaggttat gctcgatgac gaccacagta ttgccgtggt cccgcaggcg
      481 gtgcaagacc ttgagcagct gttcgatatc gtaaaaatgg aggccggtgg tcggttcgtc
      541 aaggatatag agggtggctc cggtatcgcg ccgggacaac tcacgcgcga gcttcacccg
      601 ctgggcctcg ccgcccgaga gcgtggtggc attttggccc agtttaatat agctgaggcc
      661 cacctccatc agggtctgga gcttgttggc tacgggcggc accgggtcaa agaatcgccg
      721 ggcctcttcc accgtcatct ctagcacctc ggcgatgttc ttccctttgt agcggatatc
      781 cagggtctcg cggttgtagc gcttgctctt gcacacatca cactcgacat agatatccgg
      841 caggaaatgc atctcgacct tgataacccc atccccctga caggcctcgc agcgcccgcc
      901 cttgacgttg aagctgaagc ggccggggga atagccgcgg gagcgcgcct cgggcgtcgc
      961 cgcaaacagc tcccggatag gggtgaagac cccggtgtag gtcgccggat tggagcgggg
     1021 ggtgcgaccg atcgggctct gatcaatatc gacgacctta tcgagccgct cgagtccctc
     1081 gatctcccgg cagggcatag gctcgagatg ggcgcggttg agccagcggg ctgcccaccg
     1141 atacagggta tcattgacca gggtcgactt gcccgatccg gagacaccgg tgacaccggt
     1201 tatcaacccc aggggtatct ccacatcgat ctgtttcagg ttgttgccgc tcgcgccctc
     1261 aatccgtaaa acccgcgccg gatcataggg agtacgccgt gcgggcagcg gaatacgcct
     1321 tcgtccggac agatactgcc cggtgagcga gctcgaatga gcagcaatgg cctccggcgg
     1381 tccttggac
//
LOCUS       DASQSL010000173         1099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_152444, whole genome shotgun sequence.
ACCESSION   DASQSL010000173 DASQSL010000000
VERSION     DASQSL010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152444"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..158)
                     /gene="ssb"
                     /locus_tag="VE844_01760"
     CDS             complement(<1..158)
                     /gene="ssb"
                     /locus_tag="VE844_01760"
                     /inference="COORDINATES: protein motif:HMM:TIGR00621.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HZC00118.1"
                     /translation="MASLNNVVLLGNLTRDPEVRYTPSGTPVATLGVAVNNRMKQGDE
                     WKDDPCFI"
     gene            complement(158..544)
                     /gene="rpsF"
                     /locus_tag="VE844_01765"
     CDS             complement(158..544)
                     /gene="rpsF"
                     /locus_tag="VE844_01765"
                     /inference="COORDINATES: protein motif:HMM:TIGR00166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HZC00119.1"
                     /translation="MQLYETIFIIHPELNEEDVEEHIKRVENLLTRLGAEILRTERWG
                     KKRLAYEVDKHRYGYYVLLRLRGNSAILPELERHYRLTEGIIKSLVIRLKAEPKEEPV
                     MVAHEGPPGEEEERSLREDEEDEEER"
     gene            complement(967..>1099)
                     /locus_tag="VE844_01770"
     CDS             complement(967..>1099)
                     /locus_tag="VE844_01770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016522305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sodium/proton-translocating pyrophosphatase"
                     /protein_id="HZC00120.1"
                     /translation="EAHKAAVVGDTVGDPFKDTSGPSMNILIKLMSVVSLVLAPLLR"
BASE COUNT          222 a          374 c          265 g          238 t
ORIGIN      
        1 tcgatgaagc aagggtcatc tttccactca tccccctgtt tcatccgatt gttcaccgcc
       61 acgcctaagg tcgccactgg tgtccctgac ggtgtgtaac gcacctccgg gtcccgggtt
      121 aagttcccca ggagtacgac gttattcaaa ctggccatta acgctcctcc tcatcctcct
      181 catcctcccg aagtgagcgc tcttcttcct cacccggggg cccctcgtgg gcgaccatga
      241 cgggctcttc cttgggctcc gctttcaagc ggatcactaa tgacttaata ataccctcgg
      301 tgagccggta atggcgctct aactccggca aaatagcaga attcccccgg agtcgcagga
      361 gcacatagta cccatagcga tgcttgtcga cctcgtacgc caggcgcttc ttgccccagc
      421 gctcggtcct gaggatctca gcccccaacc gggtcaacag gttttcaacc cgtttaatat
      481 gttcctcgac atcctcttca ttcagctcgg gatggatgat gaagatcgtt tcgtacaact
      541 gcatctgttc actaccccct tatccttggt tccccggttg ccgtggccta cctatccact
      601 gtaacgtacc ataaacgtga cataaaatca accttccacg cacacgcagg cggggtaaca
      661 gccgccgtgg cgacggaggt tcttgacgta tcgtgctgct aagaacccac ccccctccag
      721 ggggccaccc agcgattctc gccccacagc ccggccgaac ctccgtctcg ccagcttgat
      781 gcgtcgacca cagccctggc catgccggcc cacacccagg ccgagcttat cgatggccca
      841 atcccgccgc ccgcagggtg ggacttctta agcgtacccc ctgcctgacc tgccgtggca
      901 gggatgctgc tggcatcgac agccgcctcg tcgctaaaca ggggctcgca ctgtagatat
      961 acgccgttag cgtagcagag gagcgagcac aagtgatacc acagacatca atttaatcag
     1021 gatattcatc gaaggcccgg aggtgtcttt gaaagggtca ccgaccgtat cgcccaccac
     1081 agccgcctta tgcgcctct
//
LOCUS       DASQSL010000174         1109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_1554, whole genome shotgun sequence.
ACCESSION   DASQSL010000174 DASQSL010000000
VERSION     DASQSL010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1554"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1109)
                     /locus_tag="VE844_01775"
     rRNA            complement(<1..>1109)
                     /locus_tag="VE844_01775"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          187 a          366 c          275 g          281 t
ORIGIN      
        1 gcgacttagc agagacctgt gtttttggta aacagtcgct tggaccgatt cactgcggcc
       61 ccctcgggct ccccgcgtat gcggttcacc ctaccagggc gccccttctc ccgaagttac
      121 ggggcaattt tgccgagttc cttaacgagg gttcttccga tcgccttggt attctctacc
      181 tgcccacctg tgtcggtttt ggtacgggca cgacccacct gcctagacgc ttttctcgga
      241 gacatggctt caggaacttc gcccttttgg ggctcggcat cccgtctcag gcttaacagc
      301 cggcggattt ccctaccggc caccctacgc ggttaccccg gaatccaata accgggtttc
      361 catagcctac cccgtcccgc catcggtgat agcggtgggg acgtggtaca ggaatatcaa
      421 cctgttgtcc atcgcctacg cctttcggcc tcggcttagg tcccgactaa ccctgagcag
      481 attagcttta ctcaggaacc cttgggcatt cggcggacgg gtttctcacc cgtctttcgt
      541 tactcatgcc agcattctca cttcccgcgc ctccacgact ggcttccgcc gccgcttcgc
      601 tggcgcggga acgctcccct accactccgc ctgtcggcga agtccgtggc ttcggttcca
      661 tgcttgagcc ccgttgaatt ttccgcgccc gaccacttga ccagtgagct gttacgcact
      721 ctttgaatgg tggctgcttc taagccaaca tcctggttgt ctgtgcaatc ggacatcgtt
      781 tcccacttag ctggaaatta ggggccttag ccgacggtct gggctgtttc cctttcgagc
      841 acgaagctta tcccccgcac tctgactgcc acgctctgga ataccggcat tcggagtttg
      901 cctgagttcg gtaagctggt aggcccccta gcccaaacag tgctctacaa ccggtattga
      961 acgcgtgacg ctatacctaa atatatttcg gggagaacca gatatctctg agtttgatta
     1021 gcctttcact ccgacccaca ggtcatccgc cccgttttca cccgaggtcg gttcggtcct
     1081 ccacggggtc ttacccccgc ttcaacctg
//
LOCUS       DASQSL010000175         1198 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_138666, whole genome shotgun sequence.
ACCESSION   DASQSL010000175 DASQSL010000000
VERSION     DASQSL010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1198)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1198)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1198
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138666"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..950
                     /locus_tag="VE844_01780"
     CDS             <1..950
                     /locus_tag="VE844_01780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015199292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZC00121.1"
                     /translation="VRPLREGDLSEADRIMHLAFGTFLGLPEPMTFMGDAGYVQTRWL
                     AAPDAAFGAEVDGRLVGSNFATNWGSVGFFGPLTVEPDFWNKGIGSRLMDPIEECFAN
                     WGTRHEGLFTWSHSPSHIHLYEKFGFWARFLTAIMSKSIRQRLLEGVDEPPSQWSRFS
                     TLSEGDKEQVIEDCRELTNTIYDGLDLAGEIRAIDTQDLGDTLLLWDNARLVGFAACH
                     VGAGTEAGSGACYIKFGVIRPGNNAGENFERLLDACEALAATLGAQLLTAGANMGRHE
                     AYRAMRKRGFRTDIQGVAMQRSNDPGYHVPGVYIIDDWR"
BASE COUNT          268 a          322 c          359 g          249 t
ORIGIN      
        1 cggtccgccc attgagagag ggcgacctct cagaggccga tcgcatcatg cacctcgctt
       61 tcggcacctt cctcgggctc cccgagccga tgacgttcat gggcgatgct ggttacgtgc
      121 agacgcgctg gttagctgcc ccggatgcgg cttttggggc agaagtagac ggtagactcg
      181 tcggttctaa cttcgcgact aactggggca gcgtgggttt cttcggacca ttgacagtag
      241 agcctgactt ttggaataag gggattggat cacgcttgat ggacccaata gaggagtgtt
      301 ttgccaactg gggtactagg cacgagggac tattcacctg gtcccacagc ccgtcgcaca
      361 ttcacctgta cgaaaagttt ggattctggg cgcgatttct caccgccatc atgtccaagt
      421 cgatcaggca gaggctgcta gaaggggtgg atgagccccc ctcgcaatgg tcgcggtttt
      481 ccacattgtc ggaaggcgat aaagagcaag tcatcgaaga ctgccgcgag ctgacgaaca
      541 ccatctacga cgggcttgat ctagcaggcg aaatccgcgc gatcgacacg caagacctcg
      601 gcgatacttt attgctctgg gacaatgcga gactggtcgg gtttgccgct tgtcatgttg
      661 gagcaggaac cgaggcgggc agcggcgcat gctatatcaa gttcggggta atccggccag
      721 ggaataacgc gggagagaac ttcgagcgac tgctagatgc ctgcgaagca ctggccgcta
      781 ccctgggtgc gcagctactc actgcggggg cgaatatggg ccgccacgag gcgtaccgtg
      841 ccatgcgcaa gcggggattc cgcaccgaca tccagggcgt cgcgatgcag cgatcgaacg
      901 atccgggtta ccacgttccc ggcgtctaca tcatcgacga ttggcgctaa ctcggcttag
      961 aaggaccgat agaaggaaga gccggggtat aacagcttcg gctcttttta tggcacagac
     1021 ttgccgagaa taactgctct cggcagctcg gtgaatagag ccgatttcag gccactgtcc
     1081 cgattccttc taggacaaat tacctatatc actgaacgcc tagcgagggt aataatccac
     1141 ctcagaagcg ttcatgtata gctattgacc tgcacctaga agaggagcag cagcaatg
//
LOCUS       DASQSL010000176         1029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_110610, whole genome shotgun sequence.
ACCESSION   DASQSL010000176 DASQSL010000000
VERSION     DASQSL010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110610"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..898)
                     /locus_tag="VE844_01785"
     CDS             complement(<1..898)
                     /locus_tag="VE844_01785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011565589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HZC00122.1"
                     /translation="MGAAIPGMHYTAMTAVILAPNAICISTPNGIDPTWLAILVGAGS
                     FMILSLTLLVSVFDVRLAEQNDKMVKQLKKANDELQQAVLGLQKAKQAAEAASQAKSQ
                     FLANMSHEIRTPMNGVLGMTELLLGTPLNDVQRRFAKTVRISGEALLAIINDILDFSK
                     IEVGKLELETIDFDLRQIVEDIHELFAECAQTKGLEVLCHIHDDVPVALRGDPGRLRQ
                     ILTNLIGNAIKFTGHGEVMVKIKRLTSTTEAHSLGDIPEEQIYLLHFAVTDTGIGISP
                     ETQEGLFQAFTQGDGSTAQTRWH"
BASE COUNT          226 a          274 c          291 g          238 t
ORIGIN      
        1 ggtgccaccg tgtttgcgcg gttgatccgt cgccctgggt aaaggcttgg aacaagccct
       61 cctgggtctc tggcgagatg ccgatgccgg tgtcggtgac tgcaaaatgc agcagataga
      121 tctgttcttc agggatgtct cccaggctgt gagcctccgt ggtgctcgtc aagcgcttga
      181 ttttgaccat cacctcacca tggccagtga actttatagc gttgccaatc aagttggtaa
      241 ggatctggcg caggcgaccg gggtcgcccc gcagggccac cggcacatca tcatggatgt
      301 ggcagaggac ctccagccct ttggtttggg cgcactcggc aaacagttca tggatatcct
      361 caacgatctg gcgcaggtcg aaatcgatgg tttcgagttc cagcttgccg acctcgatct
      421 tggagaaatc caagatgtcg ttgatgatgg caagcaacgc ttctccggaa atgcgcacgg
      481 ttttggcaaa tctgcgctgc acatcattta aaggggtgcc caggagcagt tcggtcatgc
      541 ccagtacacc gttcattggg gtacgtatct cgtggctcat gttggccaga aactgcgatt
      601 tggcttggct tgccgcttcg gcagcttgtt tggctttttg aagccccagc actgcttgct
      661 gcaactcgtc gttcgccttt tttagctgtt tgaccatctt gtcgttctgc tcggctagcc
      721 tcacgtcaaa gaccgaaacc aacaaggtca acgagaggat cataaaagag ccagctccca
      781 ctaagatggc cagccaggtg ggatcgattc cgttgggagt cgagatacag atagcgttcg
      841 gagcgaggat cacggccgtc atagctgtat agtgcatgcc agggatcgct gcgcccatca
      901 caaccgcgcc ccccaacttt tgccagatga ccgaccgagt agaattggaa ggccggaatt
      961 tgaaagctat ccgcaatgca accatggaaa cggtaattgc gatcaggatc gaaagcacga
     1021 agagaaccg
//
LOCUS       DASQSL010000177         1043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_125085, whole genome shotgun sequence.
ACCESSION   DASQSL010000177 DASQSL010000000
VERSION     DASQSL010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1043
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125085"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..374)
                     /locus_tag="VE844_01790"
     CDS             complement(<1..374)
                     /locus_tag="VE844_01790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007354620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00123.1"
                     /translation="MRTRSPKPPRPAVLPCINPHAAGLDIGREEMWACVPEDRDAQPV
                     RPFGTFTPDLYVLADWLATCRIETVAMESTGVYWIPIYEMLEARGFRVYLVHAHHVKH
                     VPGRKSDVKDCQWIQHLHTCGLL"
     gene            688..>1043
                     /locus_tag="VE844_01795"
     CDS             688..>1043
                     /locus_tag="VE844_01795"
                     /inference="COORDINATES: protein motif:HMM:NF044863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00124.1"
                     /translation="MSYFYPHDLIDSIIGQWYRHQEIFQETQRTAYNAYKATYTSDER
                     PTPSFEPAPFPVQDTSLLKTMLETMYHVSFLTEESRRTTARIAYMLPETLTQLDPPIK
                     FYPLFNSLPLRFLDLL"
BASE COUNT          244 a          328 c          255 g          216 t
ORIGIN      
        1 agcaggccac aggtatgcaa gtgttgaatc cactggcagt ccttcacatc gctcttgcgc
       61 cccggtacat gcttcacgtg gtgcgcatgg accaggtaca cgcggaagcc tcgcgcctcc
      121 agcatctcat aaatgggaat ccaatagacg ccggtcgatt ccatggccac cgtctcaatc
      181 cggcaggtgg ccagccagtc cgccagcaca tagaggtccg gggtaaaggt cccaaatggc
      241 cgcaccggct gggcatcacg gtcttcaggc acgcacgccc acatttcttc acgaccaata
      301 tccaaaccgg ccgcgtgcgg gttgatacag gggagcacag cgggacgagg gggtttaggg
      361 gaacgtgtgc gcatggggag acctccattg tcagaaaaaa tcagcgctcc agacctggtc
      421 aggactcctc acaaaaccca gctcaacggg gtctccgccc aacccgagcg aagccaccag
      481 tgctcaccac acgcctgacc agaaccagtc acgtcaacgg gctgtccacc acaccagtgg
      541 ctgcacggtc ttcgcttgtc tggatcgagg tcagccttat accctacggc gcccccgttt
      601 ctgcccgcgc gcctaccacg ccgtggtatg ggggtcacgt caccacatcc tgggtcctcg
      661 tcagttgtgg tgagtcggag cgatgcgatg agctatttct atcctcatga tcttatcgac
      721 tcaattattg gacaatggta ccgccatcaa gagatattcc aggaaacaca acgaacggcc
      781 tacaatgctt ataaggcgac atataccagt gatgagcgtc cgacgccgag tttcgaaccc
      841 gccccgtttc ccgtacaaga cacatcttta ttaaaaacca tgcttgaaac catgtaccat
      901 gtcagtttcc tcaccgagga aagtaggcgt acgacggctc gtattgctta tatgctccca
      961 gaaacgctca ctcagcttga ccctcccatc aaattttacc ccctattcaa ttcactgcct
     1021 ctgagattct tagacttgct cca
//
LOCUS       DASQSL010000178         1205 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_70059, whole genome shotgun sequence.
ACCESSION   DASQSL010000178 DASQSL010000000
VERSION     DASQSL010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70059"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            253..939
                     /locus_tag="VE844_01800"
     CDS             253..939
                     /locus_tag="VE844_01800"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HZC00125.1"
                     /translation="MARAGERLYDPVQGDSIEFKETARDTGGALLSGVWTAVGTPPMH
                     VHPLQEERFEVLSGTVGIQIEDEQRSLEEGEEATVPPGTPHRWYSVDDQEKARFLFEL
                     RPALNTEILFETLYGLATDGNTDRNGLPKPLQMAVILNGLHKGEIYLARPPIAVQKAL
                     FALLSPVGKLVGYRDHYPKYSGADTASEEGAGPPSKTSVMARGVAMAASLLVASLFLV
                     GRMRRRRSKG"
BASE COUNT          290 a          324 c          366 g          225 t
ORIGIN      
        1 tgcgggatga gaccgacctg gaggcactga ataacgaact ggttggggta gtgagagaga
       61 cgatgcagcc cgcccacgtc tctttatggc tgcgccccga tacaccccgg aagggcgagc
      121 aagcaggcta gcaagtcctc attcacccaa ctgcctagaa taggtattct cggaagtagc
      181 actgttctcg cagctttcgc tacaatatag gcacaggcgc tccggtgggg agcgcgagga
      241 ggtgtaggaa ctatggcgag ggcaggagag cgactctacg acccagttca gggggactcg
      301 atagagttca aggagaccgc tcgggatacg ggcggggcgc tgctgagtgg ggtttggacc
      361 gctgtgggca ctccaccgat gcacgtccat cctctccagg aggagcgttt cgaggtcctc
      421 tcaggcaccg ttggtatcca gatcgaggac gagcagcgaa gcctcgagga aggagaggag
      481 gcaaccgtac cgcctggcac accccacagg tggtacagcg tagacgacca agagaaggcc
      541 cgcttcttgt tcgaactacg gccggctttg aacaccgaga tcctcttcga gactctctat
      601 gggcttgcca cagatggcaa caccgacagg aacggcctac ccaaaccatt gcagatggcg
      661 gtaatactca acggcttgca taaaggcgag atctacctcg ctaggccgcc catagcggtc
      721 caaaaagcac tgttcgcgct actgtcgccc gtgggcaagt tggttggcta cagagaccac
      781 tacccaaagt acagcggagc ggatacagcg agtgaggagg gagcaggccc gccgtccaaa
      841 acgagcgtga tggcgagggg cgtagccatg gcggcctcgc ttttggtagc atccttattc
      901 ttggttggga ggatgcggcg gcgccgaagc aaaggataga gcttcccagc caaacaaact
      961 tctgctgata gcctatattt actggagtga gtagaaggta ggagttctcc gaagttcgct
     1021 cgttgcggcg ccgcaacttg accctagttt gaccctaacc cggacgcaac accctgcaat
     1081 agtgagcaat ccagagaata gaaaattttt tacttatgcg agatttgcaa gcgtgtgcaa
     1141 cgctcagcaa caactgaccg atcactccta atgagcaggg gaaagcggtt cgagtccgct
     1201 cgtcg
//
LOCUS       DASQSL010000179         2566 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_42610, whole genome shotgun sequence.
ACCESSION   DASQSL010000179 DASQSL010000000
VERSION     DASQSL010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2566
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42610"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1094
                     /gene="egtB"
                     /locus_tag="VE844_01805"
     CDS             <1..1094
                     /gene="egtB"
                     /locus_tag="VE844_01805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014779565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0052699 - ergothioneine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ergothioneine biosynthesis protein EgtB"
                     /protein_id="HZC00126.1"
                     /translation="NFLLRVYDPTYREFHPRFGYLFNSYYETVGVFYPRSCRGLLSRP
                     TVEEVFHYRSYVDTVMEELIASLEEMEWGAFAYRVTLGIHHEQQHQELLLTDIKHIFA
                     TNPLRPVYREPGVLPKLEQASLQWVEYTGGLSAIGHAGDDFAFDNEAPRHRVYLEDYA
                     LASRLVTNGEFMEFIEAGGYEKPEYWLSDGWRTAKQEGWYAPLYWERIDGRWWHMSLG
                     GMQSVWEYAPVCHVSYYEADAFVRWAGTRLPTEAEWEHAASERPIAGNLYEAGWLCPL
                     PAAEGATPLQIYGDVWEWTQSPYLPYPGYHPPAGALGEYNGKFMCNQIVLRGGSCVTP
                     ASHIRASYRNFFFPRDRWQFTGIRLAEDR"
     gene            1091..2062
                     /gene="egtD"
                     /locus_tag="VE844_01810"
     CDS             1091..2062
                     /gene="egtD"
                     /locus_tag="VE844_01810"
                     /EC_number="2.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019020748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030745 - dimethylhistidine
                     N-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0052699 - ergothioneine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-histidine N(alpha)-methyltransferase"
                     /protein_id="HZC00127.1"
                     /translation="MKAAPVQFYNYPCSADDNLREAVFAGFAQQPKRIPPKFFYDRRG
                     SELFEAICELPEYYLTRTESAILHYYAEDIARCVQSDCLLVELGSGASKKIRLLLDIL
                     HPTAYLGIDISREFLLKSTRRLAYDYPWLEVHAACLDFSRPFRLKWYPKELNKLVFFP
                     GSSIGNLEPEAAVIFLKQLRPLLEPDGALLIGVDLKKAPLILHAAYNDAQGITAAFNL
                     NLLHRIQRELDTDLMPERFEHSAFYNQPAGRIEMHLVSRERQRIRVEAAHFSFEAGEP
                     LHTENSYKYSLEEFHRLAAYAGYWPEKAWTDARQWFSVHYLRLAAAT"
     gene            complement(2323..>2566)
                     /locus_tag="VE844_01815"
     CDS             complement(2323..>2566)
                     /locus_tag="VE844_01815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00128.1"
                     /translation="LDKLDQQGFSRQTLIELGDICSKWLNPKRAYPRGIFDHVVIYVL
                     RDFCFSLENWMVGQEDKLSGITTVQHAKIQSMVVSP"
BASE COUNT          541 a          705 c          692 g          628 t
ORIGIN      
        1 agaatttcct gctgcgtgtg tatgatccga cttaccggga atttcatcca cggttcggtt
       61 acttgttcaa ttcctattat gaaacggtag gcgtgtttta tccgcgctcc tgccgtggat
      121 tactctctcg acctacagtg gaggaggtct tccactatcg cagctatgtc gatacggtga
      181 tggaggagct tatcgcctcg cttgaggaga tggagtgggg cgcctttgct taccgggtaa
      241 ccttaggtat ccaccatgag caacaacacc aggaattgct gctcaccgat atcaaacata
      301 tcttcgccac caatcccttg cgcccggtgt atcgcgaacc aggggttttg cctaagctcg
      361 aacaggcctc gctgcaatgg gtggaatata cgggcggtct cagcgccatc gggcatgcgg
      421 gcgatgattt tgcctttgac aatgaggctc cacggcaccg ggtgtacctc gaagattatg
      481 cgctcgcctc acgcctggtg accaatggtg aattcatgga attcatcgaa gccggaggtt
      541 atgaaaagcc cgaatactgg ctttccgacg gttggcgcac ggcgaagcaa gagggctggt
      601 atgcgcccct ctattgggag agaatcgatg ggcgctggtg gcacatgagc ttgggtggaa
      661 tgcagtccgt ttgggagtat gcaccggtgt gccacgtgag ctactatgag gccgatgcct
      721 ttgtccgctg ggccggcacc cggctgccca ccgaggcaga gtgggagcat gcggcatcgg
      781 agcggcctat cgcgggcaat ctgtatgaag caggatggct gtgtccgctc cctgcagcag
      841 aaggcgccac gcctttgcag atctatggcg atgtgtggga atggacgcag agtccttatc
      901 tcccgtatcc tggctaccac ccacccgccg gggccctcgg tgaatacaat ggcaaattca
      961 tgtgcaatca aatagtgctg cgtggcggct cttgcgtcac acccgcttcc cacatccgcg
     1021 cgagttaccg taattttttc ttcccgcgtg atcgctggca gttcacgggg atccggctgg
     1081 cggaggaccg atgaaagctg ctcctgtcca attctataat tacccctgta gcgctgacga
     1141 caacctgcga gaggctgtat tcgcgggatt cgcgcagcaa cccaagcgca ttcctccaaa
     1201 attcttctat gaccggcgcg gctcggaact gttcgaggcc atctgtgaac tcccggagta
     1261 ttatctgacc cgcacggagt ctgctatcct gcactactac gcagaggata tcgcccgctg
     1321 cgtgcaatcc gactgtctac tcgtggagct tgggagcgga gccagcaaga agatcaggtt
     1381 gctgctcgat atcttgcacc ccaccgccta cctcggcatc gatatctcgc gggagtttct
     1441 gcttaagtcc acgcggcgcc ttgcctacga ctatccatgg ctggaggtgc atgcggcctg
     1501 tctagacttt agccgacctt ttagactcaa gtggtatccc aaggagttga acaagctcgt
     1561 gttttttccg ggttcgagca ttggtaatct cgagccggag gcagcggtga tattcctaaa
     1621 gcaactgcgc ccgctgctcg aacctgatgg cgcgctcctc atcggggtgg atctcaaaaa
     1681 ggctccgtta atcttgcatg cggcttataa cgacgctcaa gggattactg ccgcctttaa
     1741 tctaaatctg ctccacagga tccaacgcga gctcgatacg gatcttatgc cggagaggtt
     1801 tgagcatagt gctttttaca accaaccggc aggacgcatc gagatgcatc tcgtcagccg
     1861 cgagagacag cgcatccgtg ttgaggcggc acatttcagc ttcgaggcgg gagagcccct
     1921 ccacacagag aattcctaca aatattctct ggaagaattt caccgcctgg ctgcgtacgc
     1981 tggctattgg ccagagaaag cctggactga tgcgaggcag tggttcagcg tgcattactt
     2041 gcgcttggcg gcagccactt aatgcggtgt tttgcacttt tcctctcctt cctctggcag
     2101 ccatcgggtt tttcaaccgt ttgctgaatc gctgctttcc ctgcttcgcc tttgttagtg
     2161 agggggaagg tgttaaccac cgctgttagc gggggttaac ggttaacctc accgctctgt
     2221 cagagtttag tccgttttaa cctttcaaaa gcgtctataa actcgtcgaa cgcttttata
     2281 cagaccgctg ggtcgtttgg tgaaggcacg aaatcactcg cctcaagggc tcaccaccat
     2341 gctctgaatc tttgcatgct gaaccgttgt aatccctgac agcttgtctt cctggccgac
     2401 catccaattc tcaagactga agcaaaaatc tctcaaaacg tagataacaa catggtcaaa
     2461 aatacccctc ggatatgccc tcttcggatt taaccatttg gagcaaatgt cccccagttc
     2521 tataagtgtc tggcgtgaga aaccctgttg atcaagctta tcgagg
//
LOCUS       DASQSL010000180         1729 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_125136, whole genome shotgun sequence.
ACCESSION   DASQSL010000180 DASQSL010000000
VERSION     DASQSL010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1729
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125136"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..142)
                     /locus_tag="VE844_01820"
     CDS             complement(<1..142)
                     /locus_tag="VE844_01820"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZC00129.1"
                     /translation="MSFALEVKQVTVAFGAHTVLSHITFALSPGEIGCLLGPSGCGKT
                     SLL"
     gene            complement(126..>1729)
                     /locus_tag="VE844_01825"
     CDS             complement(126..>1729)
                     /locus_tag="VE844_01825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018954111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HZC00130.1"
                     /translation="AIVLSLPLLVISGSLWFPALEVWAHLASTVLSDYVINSLIVMVG
                     VGIGTFILGVGPAWLTAMCCFPLHRIFEWALLLPLSMPAYIIAYTYTGMLDVAGPVQT
                     ALRDGFGWRYGDYWFPDVRSLGGAVVMLTLVLYPYVYLLARAAFLEQSICVLEVSRTL
                     GCSAWQSFVRVALPLARPSIIAGLSLALMESLADYGTVQYFGVSTFTTGIFRTWFGLG
                     EPAAAAQLSALLLLFVLTLIVLEQASRKRAHYHHTSHRYRPLPGYRLRGWPAIVAFNA
                     CFLPLLLGFLLPTGQLLHWTLSTAAQVLDRQFALLALHSVSLALSAALLALVLALVMA
                     YGKRRYARPSVNVAVRFVGLGYALPGTVIAVGVMLPLAWIDNALDAWFEAHFGISTGL
                     LLSGTLVALLFGYMVRFLAVSLGTVEAGLGKIRCNMDDAARSLGLNDMAILRWIHLPI
                     MRGSLLTALLLVFVDVLKELPATLILRPFNFNTLAVRTYELANDERLIEAASSALAIV
                     LCGIVPVILLSRSISRSRPGHELRP"
BASE COUNT          460 a          500 c          519 g          250 t
ORIGIN      
        1 gtagcagcga ggtcttgccg cagccgctcg gtcccaagag acagcctatc tcacccgggc
       61 tcagggcaaa ggtgatatgg ctcagcaccg tgtgggcgcc aaaggccacc gtaacctgct
      121 tgacttcaag ggcgaagctc atggcccggt cgggagcggg agatggagcg gctgagcagg
      181 atcacgggga cgatcccaca gagcacaata gccagcgcgc tcgaggccgc ctcgatcagg
      241 cgttcatcgt tggccagctc ataggtgcgc accgccaagg tattgaagtt aaacgggcgc
      301 aggatcaggg tcgcggggag ttctttgagc acatcgacaa ataccagcag caacgctgtc
      361 aacaggctcc cgcgcatgat cggtagatgg atccagcgca agatagccat atcattgagg
      421 cccaaggagc gggcggcatc atccatgttg caccggatct tgccaagacc cgcctcgaca
      481 gtaccgagcg acaccgccag aaagcggacc atataaccga ataagagggc gaccagggtg
      541 ccgctcagca aaagcccggt cgagatccca aagtgggcct cgaaccaggc atcgagggca
      601 ttgtcaatcc aggccaaggg cagcatgacc ccgacagcga tcaccgttcc tggtaacgca
      661 tagcccaggc ccacgaaacg caccgccacg tttaccgaag gccgggcgta ccgacgtttt
      721 ccataagcca tcactaaagc cagcaccaat gccagcaaag cggcgcttaa ggccagggag
      781 acgctgtgca gcgccagcaa ggcaaattgc cgatccagca cctgggcagc ggtcgagagt
      841 gtccagtgaa gcaattgccc ggtaggtaac aggaaaccga gcagtaacgg cagaaaacag
      901 gcattaaagg ccactatggc cggccagccg cgcagccgat aaccgggcag gggacggtaa
      961 cggtgactgg tgtgatggta gtgggcgcgt ttccgcgagg cctgttcgag aacaatgagc
     1021 gtcaatacaa agagcagtaa cagggcggag agctgagcgg ccgcagcggg ttcgccgaga
     1081 ccaaaccagg tccggaagat cccggtggta aaggtagaga caccgaagta ttgaaccgtc
     1141 ccgtaatcgg ccaagctctc catcaaggct agcgagaggc cggcgatgat ggacggacgg
     1201 gccaaaggca aagctactct gacaaagctt tgccaggcac tacagcccag ggtgcggctg
     1261 acctcgagca cacagatcga ctgttccaga aaggccgctc gagccaagag atagacatag
     1321 gggtagagca ccagggtgag catgaccact gcccccccaa gcgatcgcac atcgggaaac
     1381 cagtaatccc cataacgcca gccaaatcca tctcgtagag cagtttgaac gggcccggcg
     1441 acatccagca tcccggtata ggtataggca atgatatagg caggcattga gaggggcagc
     1501 agcaaggccc attcaaagat ccggtgcaga gggaaacaac acatggcggt aagccacgcc
     1561 ggtcccactc cgaggatgaa ggtgccgatc ccaaccccta ccatcactat cagcgaattt
     1621 attacataat cgctcagcac cgtgctggcg agatgggccc atacctcgag cgcaggaaac
     1681 cataaagaac cactgatgac cagcaggggc agcgatagga ctattgcca
//
LOCUS       DASQSL010000181         1117 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_110641, whole genome shotgun sequence.
ACCESSION   DASQSL010000181 DASQSL010000000
VERSION     DASQSL010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1117
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110641"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..601
                     /locus_tag="VE844_01830"
     CDS             <1..601
                     /locus_tag="VE844_01830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011940551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-containing oxidoreductase"
                     /protein_id="HZC00131.1"
                     /translation="EYDPKVGVKVNSRLQTTHPRIYAAGDICFPFKFTHVADAMAQIV
                     IQNALFPHPFRLGYARTDALIIPWCTYTEPEIAHVGLYEAEAKKKGLEVETYTYPLSE
                     VDRAVLDGEETGFARIHVRKRTDRILGATIVGAHAGEMISEVTALMQGRRGLKTLLAT
                     IHPYPTQAEVIRKAANQWRKAHFTTGMQRLLQKWFKWTR"
     gene            619..1032
                     /locus_tag="VE844_01835"
     CDS             619..1032
                     /locus_tag="VE844_01835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00132.1"
                     /translation="MTNALICWKCGASLAKLPLPLGRLAECLACHAELHVCRMCEFYD
                     PRVTNSCNEPRAEEVKDKERANFCEYFKPRPDAYRLHDDTEARAAQAQLDALFGSGPR
                     EAWKSPSHKLGPHSEAERAREELEQLFGLEGKRDK"
BASE COUNT          249 a          305 c          351 g          212 t
ORIGIN      
        1 ggagtacgat ccgaaggtcg gggtgaaggt caactcgcgg ctccagacca cccatccgcg
       61 gatctatgcc gccggtgaca tctgctttcc attcaagttt acccatgtcg ccgatgccat
      121 ggcgcagatc gtgatccaga acgcgctctt cccgcatccc ttcaggcttg gttatgcgcg
      181 taccgacgcg ctgatcatcc cctggtgcac ctatactgag cccgagatcg cccacgtggg
      241 cctatacgag gcggaggcca agaaaaaggg gttggaggtc gagacctata cctacccttt
      301 gagcgaagtg gatcgcgcgg tcctggacgg tgaggagacg ggttttgcgc ggatccacgt
      361 ccggaagagg acggaccgga tcctcggggc gacgatcgtg ggtgcgcatg caggcgagat
      421 gatcagtgag gttaccgcgc tgatgcaggg caggcggggt ttgaaaacgc tactcgcgac
      481 gatccatccc tatcccactc aagccgaggt gatcaggaag gcagccaacc agtggcgcaa
      541 ggctcacttc accacgggga tgcagcgcct tttgcaaaaa tggtttaagt ggacccgcta
      601 agtcgaggag gagtatgcat gacaaatgcc ctgatctgct ggaaatgcgg agcatcgctt
      661 gcaaagctgc ccttacctct ggggcgcctt gcagagtgtc tggcctgcca tgctgaactg
      721 catgtgtgcc ggatgtgtga gttttacgat ccgcgagtga ccaatagttg caatgagccg
      781 agagctgagg aagtgaagga caaggagcgc gcaaatttct gcgaatactt caagcccagg
      841 cctgatgcct accgtctgca tgacgatact gaggcccgag ctgcccaagc acaactcgat
      901 gcgctgttcg gatcgggccc gcgtgaggcc tggaaaagcc cttcgcacaa gcttggaccg
      961 cactccgaag ccgagcgagc gagggaggag cttgagcagt tgttcggctt ggagggcaag
     1021 cgggataaat aacaccgcga cctggagact gcgttatttt gagtaaagta agtcccgacg
     1081 ctatccgggc catcagacgc tggaaggcca accaggg
//
LOCUS       DASQSL010000182         1188 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_110644, whole genome shotgun sequence.
ACCESSION   DASQSL010000182 DASQSL010000000
VERSION     DASQSL010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1188
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110644"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..203
                     /locus_tag="VE844_01840"
     CDS             <1..203
                     /locus_tag="VE844_01840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HZC00133.1"
                     /translation="QHLRQVVEAYGPQRVFWGTDLTRLRCPYRQAVTLFTEEVDFLSN
                     ADREWIMGRGIAAWLGWPLPTS"
     gene            322..741
                     /locus_tag="VE844_01845"
     CDS             322..741
                     /locus_tag="VE844_01845"
                     /inference="COORDINATES: protein motif:HMM:NF013920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-ribbon domain-containing OB-fold protein"
                     /protein_id="HZC00134.1"
                     /translation="MESPNRPIPQPLTPEAKPYWDGLKEQKLMLPKCEDCGKAFFYPR
                     VLCPFCQSRRIAWIQASGKGKLYSFEIAYQNFNPAYKIKPPYIFAMIELDEGPHMMSN
                     LINIDPDPKVVKCDMPVEVVFEKLTADITIPLFQPAQ"
     gene            802..>1188
                     /locus_tag="VE844_01850"
     CDS             802..>1188
                     /locus_tag="VE844_01850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase"
                     /protein_id="HZC00135.1"
                     /translation="MKELRSSVCIVGVDESDEIGTLPHKSQLTLHLESIHNAVRDAGL
                     KVADIDGIFTAGQHSPALLGEALGISPRYIDGTSVGGCSFIIMAGHALLALHHGLCDV
                     AVVSHGESGRSGVGVTRARDTSLSGQY"
BASE COUNT          265 a          343 c          334 g          246 t
ORIGIN      
        1 atcagcatct ccgccaggtg gtcgaagcct atggaccgca acgcgtgttc tggggtacag
       61 acctcacacg actgcgatgc ccgtatcgcc aggcagtgac cttattcacg gaggaagtcg
      121 atttcctctc gaacgcggac agagagtgga tcatggggcg cggcattgct gcatggctcg
      181 gctggccgct gccaaccagc taaggccgcg tcagactcta gctaaatcga tacggttgcg
      241 atggccgtga gccgcctggc actatatgat cttaccatcg atggataacg cctcaatcca
      301 gctataacgg aaaggagaag catggaaagc ccgaatcgtc cgatcccaca acccctcaca
      361 cctgaggcaa agccatactg ggatggtctg aaagaacaga agctcatgct cccgaagtgt
      421 gaggactgtg gcaaggcttt tttttacccc cgcgtcctgt gtccgttctg ccagtcccgc
      481 cggatcgcct ggattcaggc cagcggcaaa ggcaagctgt attcgtttga gattgcctat
      541 cagaatttca atcccgccta caagattaag ccgccataca tttttgccat gatcgaactc
      601 gatgaaggcc cgcacatgat gtctaatctg attaacattg accctgatcc caaagtggtc
      661 aaatgcgata tgccggtgga ggtggtcttt gagaagctga ccgcagacat tacgatcccg
      721 ctcttccaac cggcccaata gaccggacgc cattgagacg cggggcatcc atttccagtc
      781 atagcacaga ggaagacggc gatgaaagaa ctacgcagtt cggtctgcat cgttggggtt
      841 gacgaaagcg acgagatcgg taccttgccg cacaagagtc agctcacctt acacttggaa
      901 tccatccata acgccgtacg cgatgccggc ctaaaagtcg ccgacatcga tggcatcttc
      961 actgccggcc aacactctcc ggccctcctc ggtgaagccc tgggtatttc gccgcggtac
     1021 atcgacggca cgtcggtcgg tggctgctcg ttcatcatca tggcgggcca tgcgctgctg
     1081 gccctgcatc acgggttgtg tgacgtggcg gtggtttccc acggtgagag cggccggtca
     1141 ggggtgggag tgacgcgcgc ccgcgacacc agcttgagtg ggcagtac
//
LOCUS       DASQSL010000183         1502 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_56465, whole genome shotgun sequence.
ACCESSION   DASQSL010000183 DASQSL010000000
VERSION     DASQSL010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56465"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(242..973)
                     /locus_tag="VE844_01855"
     CDS             complement(242..973)
                     /locus_tag="VE844_01855"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZC00136.1"
                     /translation="MLPRIQALKAEHPFWGYRRVWAHLRFVEQLPVNKKRIWRLMREH
                     RLLVPPNLRLRAKRTPMASKPKPSKPNDWWGIDMTKVLVEGFGWVYIVLVLDWYTKKI
                     VGYYAGTRCTTSHWLAALDMAVNRQFPNGVRAQELSLMSDNGCQPTSLAFMKACAALE
                     IHRAFTSYNNPKGNADTERAMRTLKEECLWLREWTCPIALVSTLEAWIAYYNEQYLHS
                     ALGYKPPSQYEREYYSRHSPPFAAA"
     gene            complement(1015..1290)
                     /locus_tag="VE844_01860"
     CDS             complement(1015..1290)
                     /locus_tag="VE844_01860"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00137.1"
                     /translation="MPRRKWEATTKALVVLEGLQGKSVAEICTEHQISQSLYYQWRDQ
                     FLANAAKAFDDPQRTRKEARLAQENARLKQLVGELTFELKKSDERLA"
BASE COUNT          334 a          425 c          405 g          338 t
ORIGIN      
        1 taaatcgaaa ttcatccagt acctctcgca caaacctgtc gatgcatggg agtagcatac
       61 aattatgcga aaagccgatg ttgattacat tctcaagaaa atactcgaaa gccatgatca
      121 tgataatgtc tcggacttga acttgactgt tgccaaaccg cctcaagtgg aatcatctgg
      181 tgaattgacg cccacgatta ttgaccgacg tttggtaaag ctttgtaatg ctccccgtga
      241 atcaagcggc ggcgaacgga gggctgtggc ggctgtagta ctcccgttca tactgtgaag
      301 gtggcttata gcccagagct gagtgaagat attgctcgtt gtaataggcg atccaagcct
      361 ctagggtgct gacgagggct atgggacacg tccactcccg gagccacaag cactcctctt
      421 tcaacgtgcg catggcacgt tcagtgtccg cattaccctt cggattgtta taactggtga
      481 aggcgcgatg gatctccaag gctgcacatg ccttcatgaa ggcgagagag gtcggctggc
      541 agccattgtc gctcatgagg gaaagctcct gcgctcggac gccgttggga aactggcgat
      601 tgacggccat atccaaggct gccagccaat gcgatgtggt gcatcgcgta ccggcgtagt
      661 agccgacaat cttcttcgta taccagtcca gcaccagcac gatatagacc cagccaaagc
      721 cttccaccaa aaccttggtc atgtcgatgc cccaccagtc gttgggtttg ctgggtttgg
      781 gcttgctggc catcggcgtg cgcttggccc tcagccgcag gttgggcggg acgaggaggc
      841 gatgctcccg catcagacgc caaatccgtt tcttgttgac cggcagttgt tccacaaacc
      901 gcagatgcgc ccagacgcgg cggtagcccc agaagggatg ctcggccttc agcgcctgga
      961 tccgcggcag caagccctca tcacactgga ccacccgcag cgaccgctgc cgcgtcaggc
     1021 cagccgctcg tcgctttttt ttaactcaaa cgtgagctcg ccgacgagct gcttgagccg
     1081 cgcattctcc tgcgccaggc gcgcttcttt ccgggtacgc tgtgggtcgt caaaggcttt
     1141 ggccgcattc gccagaaact ggtcgcgcca ttgataatag agggactgac taatctgatg
     1201 ctcggtgcaa atctcggcca ccgatttgcc ctgaaggccc tcgaggacga ccaaggcttt
     1261 ggtcgtggcc tcccatttcc gtcgtggcat ggctgacctc cttgcgtgtc agccacagta
     1321 tactccgttc agaaaccgca ggtcttagca gggagcagta taccaaggcc tcttgccaat
     1381 ctgttcgtat tgcaagaaaa tccgcgacga tcaaaactat tggcaacagg ttgaaaacta
     1441 tatctcgcgg cattcggaag cccaattcag tcatagcatc tgtccaggct gttatgaaca
     1501 ac
//
LOCUS       DASQSL010000184         1381 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_165680, whole genome shotgun sequence.
ACCESSION   DASQSL010000184 DASQSL010000000
VERSION     DASQSL010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1381)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1381)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1381
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165680"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..603)
                     /locus_tag="VE844_01865"
     CDS             complement(<1..603)
                     /locus_tag="VE844_01865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00138.1"
                     /translation="MVPREVEQLVVRMAEENRTWGYRRIQGALANLDHAMDAITVRNI
                     LRRHHLEPAPQRRQAGMRWSQFLTLHWEVLAATDFFTVEVATWHGLVTYYVLFVMELA
                     TRRVEIAGITLHPTAAFMQQCARQLTDPVDGFLLGKRYLVHDRDTKYTQAFDALLKDS
                     SVEPIVLPPRSPNLNAHSERFVRSIREEVLHHTIIMGEESL"
BASE COUNT          297 a          378 c          393 g          313 t
ORIGIN      
        1 cagtgactcc tcccccatga tgatcgtgtg atgcaggact tcctctctga tggagcgcac
       61 aaaccgttca ctgtgggcgt tcagattggg actccgtggt ggcaagacga tgggttccac
      121 gctactgtcc ttcagcaacg catcgaacgc ctgggtatat ttggtatccc tatcgtgcac
      181 cagataccgc ttacccagca gaaatccgtc aacaggatcc gtcagttgcc gggcgcattg
      241 ctgcatgaaa gctgcggtgg gatgtagagt gatgccggcg atctcaaccc gccgcgtggc
      301 caattccatg acaaaaagga cataataggt caccaggcca tgccacgtgg ccacctccac
      361 cgtgaagaag tccgtggcgg cgaggacctc ccagtgcagt gtgaggaatt gcgaccagcg
      421 catgcccgcc tgtcggcgtt gcggagcggg ttccaagtgg tgacggcgca ggatgttccg
      481 gacggtgatc gcatccatag catggtctag gttcgcgagc gctccctgaa tgcggcggta
      541 gccccacgtc cggttttcct cggccatgcg taccacgagt tgctccacct ctcgcgggac
      601 caaaatcgga gttcttcagc aacctgctag aatgggcggt ggaattccca caccggagcg
      661 aggggcagtt taactgccga tcggggggag gttttgggcc ctctcatcat ctagaactcc
      721 ttagttatgc tcattatacc tcatgcctct cctcaccacg cgagctttga acagggggaa
      781 gcaacgatct atccgtagga gtgcgggttt gagatcagat ttcgggaaat aatttgccgt
      841 ggctctgcac atataccccc agcgacactc ttgagttgta agagcaagat atatgccact
      901 ccgtttcagt cctggggcac attcctgtgc gcagaccacg ctgtcagagc ttactcagcg
      961 gtgcccaggc agcgccctaa tgaatgatgg taggagctcg gtcgtgtgcc aattatccgt
     1021 tgcatgccac tgagtccgtg ggcttaaatg cattccggcc aacggcggct gacgaaagcc
     1081 acggagccca ggtcgtcgaa aacgctgctc tatcattttg agagatctgt tcctctcaat
     1141 ctgaaaatgg aagtaagcag gtgatagtgc tgtgacgtac caacagatgg cgatgggttc
     1201 tacccatcgt gtcgaatcag taatgcgcgg ggtgattttt cagcttaccc gcttgacagc
     1261 tttggttata atgggactgg gtaagaggca gctcttttgc agatgctatg gcagtctcct
     1321 cgcaagaagc cctgagaccc ttcgccctca ttggcgggca cgccaagatt cggtgcgaga
     1381 a
//
LOCUS       DASQSL010000185         1098 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_42667, whole genome shotgun sequence.
ACCESSION   DASQSL010000185 DASQSL010000000
VERSION     DASQSL010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42667"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            265..>1098
                     /locus_tag="VE844_01870"
     CDS             265..>1098
                     /locus_tag="VE844_01870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017364222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HZC00139.1"
                     /translation="MKDNSKPRSILITGASSGIGLCAARDLRLRGYQVIAAVRKREDM
                     IRLEQEGIETVQLDLANSASIRTAVDKALERTQGRLYALFNNGAYGQPGAVEDLSREM
                     LREQFEVNLFGTHELTRCIIPIMRAQGYGRIIQTSSVLGLVALKYRGAYNATKFALEG
                     LSDTLRMELAGTGIEVILIEPGPILSRFRENSYAAYKRHIDWENSPHRATYEAIERRL
                     QTEGAVVPFTLPPEAVVKSLVQALESSRPKLRYYVTLPTYLFAFLKRALPARLLDRIL
                     SR"
BASE COUNT          229 a          300 c          306 g          263 t
ORIGIN      
        1 tagaggattc ttgggttctg ctttcgtcca ttgcaaggct attcacaata actcttgcca
       61 ggctttatgc ttttccaacg ccgttattcg gtcgtccgac caattcagtc cgctgtcccc
      121 tttccctttt atctctccgg cgatcttatt agcaatcgta gggcgggaat cctttcccgc
      181 cgctttgtcg gcaaaggatt gccgacctac aattatctga attcggactt ttcaaacacg
      241 ctctaaaata gaatttaaca acgcatgaag gataacagta aaccgagaag tattctgatc
      301 acaggggcct caagcggcat cggtctgtgc gcggcccgcg atcttcggct acgtggctac
      361 caggtgattg cggccgtaag aaagcgagag gatatgatcc gcctcgaaca ggaagggatc
      421 gagactgtcc agctggatct tgccaattca gcctcgatcc ggactgccgt ggataaggcc
      481 ctggaacgaa ctcaaggtcg gctgtatgcc ctctttaata atggcgctta tggccagccc
      541 ggcgcggtgg aggatctgtc acgggagatg ctgcgggagc agtttgaggt aaatctcttt
      601 ggtacccatg agctgacccg gtgcattatt ccgatcatgc gtgcccaggg gtatgggcgt
      661 atcatccaga cgagctccgt gctgggactg gtggcgctta aataccgggg tgcttacaac
      721 gccaccaagt tcgcgctcga gggcctgagc gataccttgc gcatggagct tgcgggcacg
      781 gggattgagg tcatcttgat cgaacctggg cctattctca gccgcttccg cgagaattcc
      841 tacgcggctt acaagcgcca tatcgactgg gaaaacagcc cccatcgcgc gacctacgaa
      901 gccatagaaa ggcgcctgca aaccgagggt gcggttgtgc cgtttacctt gccgcccgag
      961 gccgtggtga aaagcttggt ccaggccctc gagagcagcc ggcccaagct gcgttattat
     1021 gtcaccttgc cgacctatct atttgcgttt ttgaagcggg cattgccggc ccggctcttg
     1081 gatcggatct tatcgagg
//
LOCUS       DASQSL010000186         2058 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_180014, whole genome shotgun sequence.
ACCESSION   DASQSL010000186 DASQSL010000000
VERSION     DASQSL010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2058
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180014"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..183
                     /locus_tag="VE844_01875"
     CDS             <1..183
                     /locus_tag="VE844_01875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016861523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS4/IS5 family transposase"
                     /protein_id="HZC00140.1"
                     /translation="KTRGRPIKKTVPRFQAERTFAWFQKKYRRLVVRWERIAACFEAF
                     LAIATIHIWIQRLIVG"
     gene            complement(276..1868)
                     /locus_tag="VE844_01880"
     CDS             complement(276..1868)
                     /locus_tag="VE844_01880"
                     /inference="COORDINATES: protein motif:HMM:NF040081.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6399 domain-containing protein"
                     /protein_id="HZC00141.1"
                     /translation="MAFWTKSRLIFNAFRDNARASIRQVARQTGLSKSSVHRLGQAMA
                     RRNQHRESWFWETEDGRRWLIRLVVAVLYVFGLKRGVGAETMSAFFACLHLEQHVGCS
                     PTTLRALMEQLEALIVATTEAWEREGIAQGQIGPIVGSVDETFLERMILVFMDLMSGY
                     VLLEETADERTYETWYERVRARLEPLKTSVLYLVSDRAKALIKLAQTGLKCPSIADLF
                     HLLHELAKGYALVIWRQLKTACQALSRAQAHLAKCQAEGASEAQIASAQGAVATAEAE
                     VAHWQQVRDTFWGHLEAMSLQVHPWRLEDATPQSAQEVEAKLAAEVAALQELLEANGL
                     PLNKQVLDKVQKQLTSLAAVIDVWWQTVRQDLHGQITLTPRWTTWVEAHLLPLMYWQD
                     QVSRARGRRRKAQLVQVLETVQAAFEAHPFTTQLPPEVLAGWKTWAAEHAKTFQRASS
                     AVEGRNGYLSQMHHHHRGLPKHCYQVWSALHNFDCRASDGSTPASRFFRREFPDLFET
                     VLSQIEELPRARKRYLATAISD"
BASE COUNT          433 a          637 c          553 g          435 t
ORIGIN      
        1 aaaacccgcg gcagaccgat caagaaaacg gtcccgcggt tccaagcgga gcgcacattt
       61 gcctggttcc agaagaagta tcgtcgcttg gtggttcgtt gggagcgtat cgcggcgtgc
      121 tttgaggcgt tccttgccat cgctacgatt catatctgga tccaaagact aatagtggga
      181 tagattcata tgaccatcgc tcaacgcgat tctcggagcc caacccgagg tatgtcatga
      241 tcgggtatca ccgtaaagcg ggacatttca tatcatcaat cacttatcgc agtagccagg
      301 tagcgcttac gagcccgtgg cagctcctcg atttgagata acaccgtttc aaacaggtcg
      361 ggaaactctc gccggaaaaa ccgtgaggcc ggcgttgagc cgtctgaggc ccgacaatcg
      421 aagttatgca gggcactcca cacctggtag caatgcttgg gtaaaccccg atgatggtga
      481 tgcatctggg acagatagcc atttcggccc tccaccgccg aggaggcccg ctgaaaggtc
      541 ttggcatgct cggccgccca cgttttccag cccgctaaca cctcaggcgg cagctgagtg
      601 gtgaacggat gcgcttcaaa tgcggcttgc acggtctcga gcacctggac caactgggct
      661 ttgcgccgcc ggccccgcgc acgtgatact tgatcttgcc agtacatcag cggcaacaag
      721 tgtgcttcca cccaggtcgt ccaccgcggc gtcaaggtga tctgaccatg cagatcttgc
      781 ctcacggttt gccaccacac gtcgatcacc gcggccaagc tggtgagctg cttttggact
      841 ttgtcgagca cctgcttgtt gagcggcagt ccatttgctt cgagtaactc ttggagcgcg
      901 gcgacctcgg cagccaattt cgcttcaacc tcctgggcac tctggggtgt cgcgtcctca
      961 agccgccagg ggtgcacctg caacgacatc gcctcgaggt gaccccaaaa cgtgtcgcga
     1021 acctgttgcc agtgcgccac ctcggcttca gccgtggcca ccgcaccctg ggccgacgcg
     1081 atctgcgcct cgctggcccc ctctgcctgg cacttcgcca agtgcgcctg agctcggctc
     1141 agcgcctgac acgccgtttt caactgacgc cagatcacta gcgcgtagcc cttggcgagc
     1201 tcatggagaa gatgaaacaa atcggcaatg ctcgggcact tcagccccgt ctgagccaac
     1261 ttgatcagcg ccttggcgcg gtcactgacg aggtataaga ccgacgtctt cagcggctcg
     1321 agtcgcgccc tgacccgctc ataccacgtc tcataggtgc gctcgtctgc cgtctcttca
     1381 agcaacacat agccgctcat caggtccatg aacaccaata tcatacgttc caaaaacgtt
     1441 tcatcgaccg agccaacaat cggcccgatc tgaccctggg cgatgccctc acgctcccac
     1501 gcctcggtcg tcgccacgat gagggcttcg agttgttcca tcaacgcccg cagcgtcgtg
     1561 ggcgaacatc ccacatgctg ctcgaggtga agacacgcga aaaacgcgct catcgtttcc
     1621 gcgcccaccc cccgcttgag accaaagaca tagaggaccg caaccaccag gcggatgagc
     1681 caccggcgac cgtcttcagt ttcccaaaac cacgattcgc gatgttgatt tcggcgggcc
     1741 atggcttgcc ccagccgatg cacactgctc ttggatagcc cggtttgacg ggccacttgg
     1801 cgaatgctcg ctctggcgtt atctcgaaag gcgttgaaaa tgaggcggct tttcgtccaa
     1861 aatgccatat cggtcggtcc tctgcgggga ggctaaactc gtggttgaat ttagctccgt
     1921 agagtacacg accgacacca attcgtcccg tcttacgtgg atgcccaact tgaattaagt
     1981 gagaatatcc tcgaattaag gctcatggcc atatttcgtg atgcggcgat gatttatcaa
     2041 aattagagca gtttggtg
//
LOCUS       DASQSL010000187         3604 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_83341, whole genome shotgun sequence.
ACCESSION   DASQSL010000187 DASQSL010000000
VERSION     DASQSL010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3604)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3604
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83341"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1078
                     /locus_tag="VE844_01885"
     CDS             <1..1078
                     /locus_tag="VE844_01885"
                     /EC_number="4.2.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005961370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA];
                     GO_process: GO:0071268 - homocysteine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="O-succinylhomoserine sulfhydrylase"
                     /protein_id="HZC00142.1"
                     /translation="VFTSAAQAAARFAGREPGNIYSRFTNPTVRMFEQRLATLEGGER
                     CVATASGMSAILATCMGLLKAGDHIVSSQSIFGTTLILFNTILAKFGLQTSVVPLTDY
                     GAWERAIRPETRLLFLETPSNPLTEIADIRRLADLAHDHGYLLVVDNCFCTPALQRPL
                     TLGADIIIHSATKYLDGQGRCVGGAVIGSESLIGESVFGFLRTAGPALSPFNAWVFLK
                     GLETLALRMRAHSENALSLAKQLEDHPKVLKVHYPGLKSHPQHALAVAQQSGFGGITA
                     FAVKGGQEAAWQVIDSTHLFSITANLGDTKSTITHPATTTHWRLTPEERDRVEITDGL
                     IRISAGLEDADDLWRDLEQALAMI"
     gene            1195..1605
                     /locus_tag="VE844_01890"
     CDS             1195..1605
                     /locus_tag="VE844_01890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018991563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HZC00143.1"
                     /translation="MDNWQWLRQYGPLVGRTLLALIFVISGIGKMGKFAATAGYMASK
                     GLPFSEVLLVTTIIVEVGGGIALILGWQARWAALAIFLFLVPTTLIFHNFWAVDTEQY
                     QNQFNHFFKNVCIMGGMLYIMAFGPGPFSLGKDR"
     gene            1691..2608
                     /locus_tag="VE844_01895"
     CDS             1691..2608
                     /locus_tag="VE844_01895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013947582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HZC00144.1"
                     /translation="MSWTQANNPVCTRRASTPAIETIIEARKRDLGGFTVGRLLPASA
                     RRLVGPFIFFDHMGPAELAPGQGIDVRPHPHINLATVTYLFEGEIVHRDSLGSHQPIR
                     PGAINWMTAGRGIVHSERTGPELRKTESRLHGVQLWVALPKAYEEAEPDFCHYGASAL
                     PALEEQGVRIRVLAGTAYGATSPVQTLSSLFYVEATMPQGAGLPLPGEHEERAAYVAQ
                     GVLWCGEERIEALRMVVFAPGSMPVLRAESPARVMLLGGAPMDGERHIWWNFVSSSIE
                     RIEQAKRDWKESRFPKVPGETEFIPLPEE"
     gene            complement(2630..>3604)
                     /locus_tag="VE844_01900"
     CDS             complement(2630..>3604)
                     /locus_tag="VE844_01900"
                     /inference="COORDINATES: protein motif:HMM:NF018269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-heme oxidoredictase family protein"
                     /protein_id="HZC00145.1"
                     /translation="VAFIRDFNRGASHNELGMQAVEIVGDDVDGDFDSVTNEFTIGDQ
                     TTLAVYLAAQPRPTILLELQELDLIDPLPSSQVAAINRGRQVFEQVGCATCHVPQLFI
                     EKPIFSEPSQNANYRDRVFPAGQDPVARDVDPRFAVTFDLTRDQPDNIIRDRFGNIRV
                     QLGSFQSDGFGRAIVDLFGDLKRHQMGLRLAEPVNEIAGDDTSPNPTAPLNNHTPSTF
                     LTENLWGVGSTAPYLHDGRATTIVEAILEHGTDDPADISEAHNSRRAYLGRSDSDKKA
                     LVAFLENLVLFKVEEEEETDAATGQVTTKSVIKMAPKGVRLMIQGSQP"
BASE COUNT          688 a         1059 c         1102 g          755 t
ORIGIN      
        1 tgtattcacc agtgccgccc aagcggcagc acgctttgcc gggcgtgagc ccggtaatat
       61 ctactcgagg tttaccaatc ctaccgtgcg catgttcgag caacgcttgg ccacccttga
      121 aggcggtgag cgttgcgtcg ccacagcatc gggcatgagt gcgattctag cgacttgtat
      181 gggattgttg aaggcagggg accacatcgt ctcctcccaa agtatctttg gcaccaccct
      241 cattctgttc aacacgatcc ttgccaaatt tggcctgcag acgagcgtcg tgcctttgac
      301 cgactacggt gcctgggagc gggccatccg gccggaaaca cgcctgctgt ttttagagac
      361 gccctcgaat ccgctgaccg agatcgccga tatccggcgg cttgcggatc tagcccatga
      421 ccatggctac ctgctggtgg tcgataattg tttctgcaca cccgcgttgc agcggcctct
      481 gacgctcgga gccgatatta tcattcactc cgctaccaaa tatcttgatg gtcaaggccg
      541 ctgcgtagga ggagcggtga tcggcagcga gtctttgatc ggggaatccg tgtttggttt
      601 tttacggacc gcagggcctg cgctgagccc gtttaatgcc tgggtcttct tgaaggggct
      661 ggagacgcta gcgctcagga tgcgcgctca cagtgagaat gccttgagcc tggcaaagca
      721 actcgaagat caccctaagg ttttgaaggt gcattatcca gggcttaaat cgcatcccca
      781 gcatgcgctg gcagttgctc agcagagcgg ctttggcggg atcaccgcct ttgcggtgaa
      841 ggggggccaa gaggccgcct ggcaggtgat cgatagtacc catttgttct caatcaccgc
      901 gaatctcggg gataccaaga gtacgattac ccatcccgct accaccaccc attggcgcct
      961 caccccggaa gagcgggatc gggtggagat cacagacggt ctgatccgca tctccgccgg
     1021 cctcgaagac gccgatgatc tatggcgcga tcttgaacag gcactcgcta tgatctgaat
     1081 gcgtacatta cggtcagtca aagaaaagtt cgcatcgccg acgggaaggt tatcgagtcg
     1141 tcaactcgcc tctgacgcac ggggctgaaa ccactgactt tggagggtac tttcatggac
     1201 aactggcaat ggttaagaca atacgggcca cttgtggggc ggaccttgct tgcgctcatt
     1261 ttcgtgatct cggggatagg taagatgggc aagttcgcgg cgacggcggg ctacatggca
     1321 agcaaggggc tgccgttctc tgaagtgctg ctcgtcacca ccatcattgt cgaagtcggt
     1381 ggcggcatcg ccctcatcct cggctggcag gcgcgctggg cggcacttgc gatcttccta
     1441 ttcctcgtcc cgaccacact catcttccac aacttctggg cggtggacac ggagcagtac
     1501 cagaaccagt tcaatcattt cttcaagaac gtgtgcatca tggggggcat gctctacatc
     1561 atggccttcg gccccgggcc gttcagcctc ggcaaggacc gctgagcgga atgtatactc
     1621 tcttctcgta ccacagcatg ggcgtgcgca ccagcgctaa cactacaggc gcccctttgg
     1681 aggaagcgtt atgagctgga cccaagccaa caaccccgtc tgcacgcgcc gtgcatcgac
     1741 tcccgccatc gagacgatca tcgaagcgag gaagcgagat ctcggcggct tcaccgtggg
     1801 gcggctgctt cctgctagcg cacggaggct cgtcgggccc ttcatcttct tcgatcacat
     1861 ggggccggcc gagctggcac ccgggcaagg gatcgacgtg cgcccgcatc cgcatatcaa
     1921 cctcgctaca gtcacctacc tttttgaagg ggagatcgtg caccgagata gcctcggctc
     1981 gcaccagccg atccggcctg gggccatcaa ctggatgacc gctggaagag gcatcgttca
     2041 ttcggagcgt accgggcctg agctgagaaa gaccgaatcg cgattgcacg gcgtccagct
     2101 ctgggtcgcg ctgccgaagg cctacgagga agcggaaccg gacttctgcc actatggagc
     2161 gtctgcgctg ccagcgctcg aagagcaggg cgtacgtatt cgggtcctcg ccggcacggc
     2221 ctatggcgcc acctcgcccg ttcagacgct gtcgtcgctc ttctatgtcg aggcgacgat
     2281 gccccagggt gcggggctac cgctgcctgg tgagcacgag gagcgagctg cctatgtcgc
     2341 ccaaggggtg ctctggtgcg gcgaggagcg catcgaggca ttgcgcatgg tcgtgtttgc
     2401 accgggctct atgcccgtac tgcgagcaga gtcgcccgcg cgcgtcatgc tcctcggtgg
     2461 cgctccaatg gacggagagc gacacatctg gtggaacttc gtgtccagct ccatagaacg
     2521 tatcgagcaa gccaagcgcg actggaagga gagccgcttt ccgaaggtgc ctggtgagac
     2581 ggagtttatt ccactccccg aggagtgaca caaagggtgc caaatggtcc tagggctggg
     2641 aaccttgtat catcagcctg acgcccttgg gagccatctt gatcaccgac ttcgtggtca
     2701 cctgaccggt cgccgcgtct gtttcttctt cctcttcgac cttgaatagc acgaggttct
     2761 cgaggaacgc aacgagcgcc ttcttgtccg agtcggaccg gcccaggtat gccctgcggg
     2821 aattgtgagc ctcgctaatg tccgcaggat cgtcggttcc atgctcgaga atcgcttcga
     2881 cgatggtcgt ggcacggccg tcgtgcaggt atggtgcggt ggacccgacg ccccacagat
     2941 tctcagtgag gaacgtgctc ggggtgtggt tgttgagcgg agcggtcggg tttggagagg
     3001 tgtcgtctcc agcgatttca ttgaccggct ctgccaagcg cagtcccatc tgatgccgct
     3061 tgaggtcacc gaagagatcc acaatggctc ggccgaagcc gtcgctttgg aacgaaccca
     3121 gttgcacgcg gatgttgccg aaccgatccc ggatgatgtt gtccggctgg tcacgtgtga
     3181 ggtcgaacgt aaccgcgaaa cgcgggtcta cgtcgcgcgc caccgggtct tgcccggccg
     3241 ggaaaactct gtcgcggtag ttcgcattct gactgggctc gctgaagatg ggcttttcaa
     3301 tgaacagctg tggcacgtgg cacgtggcgc agccgacctg ttcgaacact tgacggccgc
     3361 ggttgatggc ggctacctgc gatgagggca gagggtcgat gagatcgagc tcctgcagtt
     3421 cgagtaggat cgttggccgc ggttgggcag caaggtagac ggccaaggtc gtttgatccc
     3481 cgatggtgaa ctcgttcgtc acactgtcga agtccccatc cacgtcgtca ccgacgatct
     3541 ccaccgcctg catacccagc tcgttgtggg atgcaccgcg attgaagtcg cgaatgaacg
     3601 cgac
//
LOCUS       DASQSL010000188         1285 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_138793, whole genome shotgun sequence.
ACCESSION   DASQSL010000188 DASQSL010000000
VERSION     DASQSL010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138793"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(26..103)
                     /locus_tag="VE844_01905"
                     /pseudo
     CDS             complement(26..103)
                     /locus_tag="VE844_01905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011236098.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
     gene            190..612
                     /locus_tag="VE844_01910"
     CDS             190..612
                     /locus_tag="VE844_01910"
                     /inference="COORDINATES: protein motif:HMM:NF013842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 transposase-related protein"
                     /protein_id="HZC00146.1"
                     /translation="MRAYSMDIRERVMENLDQESMRKTAKRFRVSEYFIYRLKRRYKE
                     VGTLAPKPHGGGHGPLVDEAGGEFLRGVLSEAPDLTLNELCQRYERRFARKISKSSMD
                     RALRRLNLTRKKRLSTTRSKRASGFSSSVRPIKRGYRP"
     gene            642..1063
                     /locus_tag="VE844_01915"
                     /pseudo
     CDS             642..1063
                     /locus_tag="VE844_01915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012606012.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          306 a          308 c          391 g          280 t
ORIGIN      
        1 tcgagacata gtaccctcgg gcctagaata cctcgcccgt aaagttccgc tctcgacctc
       61 cgaagcgcct cgctattgca atcgcgctct tgcctttgat atatagcggt tcccactcga
      121 ttactacgca attttagggt atcttgaaaa gcgggggaga tacgagaatt gtgaagggga
      181 taaaaaccaa tgagagccta ctcgatggat atacgggagc gggtcatgga gaatctggat
      241 caggagtcga tgaggaagac ggcgaaacgg ttccgggtat cggagtactt catctaccgg
      301 ctcaagcggc gttataaaga agtggggacg ctggctccca agccacatgg agggggacac
      361 gggccacttg tggatgaggc cggtggggaa ttccttcggg gggtgctcag cgaggcgccg
      421 gatttaacgc tcaacgagct gtgtcagcgg tatgagagga gatttgctcg gaagatcagt
      481 aaatcttcga tggaccgagc gctgaggcgg ttaaatttga ctcgaaaaaa aagactttcc
      541 acgacccgca gcaaaagagc gagcgggttc agcagcagcg tgcggcctat caagaggggt
      601 taccggcctt aaaggccgag gaggtcatcg ccctggatga aatgggtgcg agcttgaatc
      661 tcacgccttt gtctggacgt tcgctgccgg gggagcgggt gtatggggct aagcccacgg
      721 cgccggggaa gcggatcagc acgatcggcg cgctcgggct aggcggctta acgacggcca
      781 tgtgttttga gggcacccta accggcgcgg tgtttttgca gttcctggac gagtttctgg
      841 tgccggggct caagcccggc cagatcgtga ttctggataa tgccaaggcc cacaaggtgg
      901 ccggcgtgcg tgaacggatt gaaggagcgg gtgcgtgctt tatctgcccc cgtattcgcc
      961 ggatttgaat cccatcgaaa tggcttggtc taaggtgaag cagttcctgc gtacggccca
     1021 ggcgcgcact gtggaagcgc tctatgaagc gattgctcaa gctttacaaa ccctttctcc
     1081 gaacgatgct aaaggcttct tcaaacatgt cggattttgt atatgatcca tatgggaacc
     1141 gctataaaaa aatattctgc ccagcaggac aaagaaagcg ggtttaccaa ggcgatcaat
     1201 ttcctcgata cccattttca aaacatgatc accttcttaa gagtatccgg tgtccaaagg
     1261 aattcgttag cggaaagtgg catgc
//
LOCUS       DASQSL010000189         1526 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_125185, whole genome shotgun sequence.
ACCESSION   DASQSL010000189 DASQSL010000000
VERSION     DASQSL010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1526
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125185"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            368..757
                     /locus_tag="VE844_01920"
     CDS             368..757
                     /locus_tag="VE844_01920"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HZC00147.1"
                     /translation="MRTVSSLLLGLLLLTGGIELSHADRLQPLLDDMASADMDTRLKA
                     ITSLGESGEIRAVPPLIAALNDEHEVIRQYAAKALQNLARVLDDAYVVVKRWLQSLIN
                     KLRLDSTDDVITVERRGGRLHPSRPAS"
     gene            862..>1526
                     /locus_tag="VE844_01925"
     CDS             862..>1526
                     /locus_tag="VE844_01925"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015288189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HZC00148.1"
                     /translation="MKFGLFMMPSHPPERGLYESHQWDLDYLTLTDELGFEEAWIGEH
                     FTSPWEPIPAPDIMIAQALMRTKRIKLGTGAHLLPFHHPAELAHRVAYLDHLAQGRFL
                     FGIGASGLPSDWALFNVDGNAGQHRDMTREALDIILKLWAAEKPFQYRGKFWTVNYPE
                     PLYGTLHFHIRPFQKPHPPIGVASVTPRSPTLVIAGERGFLPMSLGLNANYIASHWEA
                     VEEG"
BASE COUNT          332 a          436 c          445 g          313 t
ORIGIN      
        1 ttgtgcctcg gaactaccat atagcaagat gcgtgccgca actgccgatt gtggtcttgg
       61 ggaccttcct tgaaagcaaa ccacgatttt cctaggctgt tgatcaatgt catactttga
      121 cactcatcga tcaccacacc cactgcgtct ctgaggtgag acgaaaacat tgacgatggc
      181 gggaattcaa actgagagta ggggtttcaa tgacctctca cagataagac aaggatctcg
      241 taaaggagac agctatcgat cacggaggct atccgtctca tcctggaggc gttgtcactg
      301 gacggaggac aaggccaggc ccgcaccggg atggtcgggc gaggacctat gcagggggag
      361 ggagaagatg cgaacggtgt catcgctctt gttgggactt ctgttgctga ccggtggcat
      421 cgagttgtca catgccgatc ggctccaacc gctcctcgac gatatggcgt cggcggatat
      481 ggacaccaga ctgaaagcga tcacatcctt gggcgaaagc ggcgagatac gagccgtacc
      541 accacttatc gccgccttga acgatgagca cgaggtgata cgacaatatg ctgccaaggc
      601 cctgcaaaat ctggcccgcg tcctcgacga tgcgtacgta gtcgtcaaac gctggctgca
      661 gtccctcatc aacaagctgc ggcttgactc cacagacgat gtgatcactg tcgagcggcg
      721 tggtggtcgc ctccatccct ccagacctgc ctcttgacct gcaggctaaa aaggcatagc
      781 ctggcagcca cacctctgct ggatacgcga ttgaagtgga taatacagcc agtggcattg
      841 ccaacagatg gaggagaggc catgaaattc ggcttattca tgatgccatc ccacccgccg
      901 gaacggggac tgtacgaatc ccatcagtgg gatctggatt atctgaccct caccgatgag
      961 ttaggtttcg aggaagcgtg gattggggag catttcactt cgccgtggga gccgattccc
     1021 gccccagaca tcatgatcgc gcaggccctc atgcgcacca agcgcatcaa gctggggacc
     1081 ggggcgcatc tgctgccgtt tcaccatccg gcggaattgg cgcaccgggt cgcgtatctg
     1141 gaccatctgg ctcaggggcg gtttctcttc ggcatcggtg ccagcggctt gccgagcgat
     1201 tgggcgctgt tcaacgtcga tggcaacgcg ggccagcatc gcgacatgac gcgtgaggcg
     1261 ctggacatca tcctgaagct gtgggcggct gaaaaaccct tccaatatcg gggcaagttc
     1321 tggaccgtga actacccgga gccgttgtac ggcacgctgc acttccatat ccggccgttt
     1381 cagaaaccgc atccccccat cggcgtagct tccgtcaccc cccgttcccc gaccctggtg
     1441 atcgccggcg agcgaggttt tctcccgatg agtctggggc tgaatgccaa ttatatcgcc
     1501 agccattggg aagcggtgga agaggg
//
LOCUS       DASQSL010000190         1068 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_70158, whole genome shotgun sequence.
ACCESSION   DASQSL010000190 DASQSL010000000
VERSION     DASQSL010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70158"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1068)
                     /locus_tag="VE844_01930"
     CDS             complement(<1..>1068)
                     /locus_tag="VE844_01930"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HZC00149.1"
                     /translation="LVAKLRAAGAIIIAKANMDEYAGGTHRSSYAGQICNPYATDRNG
                     GSSSTGSAAAPSANLAVCGIAEESLGSIREPGKKCNVVSIAPTRGLVSRFGTWGANLI
                     RERYGPECRTVEDLAKVLDVIRGYDPNDPITATQIGYTPDVSLATFAREKTLKGKRLG
                     IIREFMPNITVNDTESIRVFNEEVIPTLIAAGAELVESINPRDIANGWAVDDPNIPNM
                     SIQKVVEEMIPTLEPAFANPSTVPSPSTTTGLLPNNLREVFGPVAALFPDETDIIQKS
                     VEMFFGITPFPDTINLRKLNNTAAGTFNQGRYALDNMLTRRNDPRVTNVLDLSIDFDD
                     LDQDGNTTEHLSFFRINDDAMG"
BASE COUNT          225 a          290 c          289 g          264 t
ORIGIN      
        1 acccatcgca tcatcattga tgcggaagaa gctgagatgc tcggtcgtgt ttccatcctg
       61 gtcgagatca tcgaagtcga tgcttaagtc caagacattg gtcactcgcg gatcatttct
      121 ccttgttagc atgttatcca aagcataccg cccctggttg aaggtgcctg cggcagtatt
      181 attgagcttt cggaggttaa tagtatctgg aaacggggta atgccgaaga acatctctac
      241 gctcttctgg atgatatcgg tttcatccgg aaacagggcc gctacaggac cgaacacttc
      301 tcgaaggtta ttgggaagga gaccggtagt cgtactcggt gaaggcacgg tagacggatt
      361 cgcgaatgcc ggttcaagag tggggatcat ctcctcgacc accttctgaa tgctcatgtt
      421 cgggatattc ggatcatcga cggcccagcc attggctata tctctcggat tgattgattc
      481 gaccagctcg gcccctgcag caatcagtgt gggaatgact tcctcattga agacacggat
      541 cgattctgta tcattgaccg tgatgttcgg catgaactcg cggatgatcc cgagccgctt
      601 gccttttaac gtcttctcgc gcgcaaaagt ggccagggaa acgtccggcg tgtacccgat
      661 ctgcgtcgcg gtaatgggat cgttggggtc atatcccctt atcacatcca ggaccttagc
      721 caggtcctct accgtccgac attcagggcc atatctttct cggatgagat tggcccccca
      781 ggttccaaag cggctgacaa gcccgcgtgt aggtgcaatg gatacgacat tacacttctt
      841 gcccggttcg cgaatcgatc ccagtgactc ttccgctatg ccacacacgg cgaggttggc
      901 cgaaggggcg gccgcggatc cggtactgga gctcccgccg tttcgatcgg tcgcataggg
      961 attacagatt tgccccgcgt aagaacttcg gtgagttcct ccggcatatt cgtccatgtt
     1021 tgccttagcg atgatgatag cccctgcggc ccgaagcttc gccaccag
//
LOCUS       DASQSL010000191         1117 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_125196, whole genome shotgun sequence.
ACCESSION   DASQSL010000191 DASQSL010000000
VERSION     DASQSL010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1117
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125196"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(221..>1117)
                     /locus_tag="VE844_01935"
     CDS             complement(221..>1117)
                     /locus_tag="VE844_01935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00150.1"
                     /translation="EATQSRWQWTWAVDDSVFHKYGEQLGLVGRWWSGQQHRVLAGID
                     GLLRVVVIGDGKLVVPVDFAVRRPDPVGVGGPWRDKLSWAREMIDARLAAFIKRGLHL
                     PPPILTADRWFSDAKLMGHVRHRHQGTLLVEGKVSYTFTLADGRQVSGHDFLEGEWPW
                     RTHPWEPGVCYVRLQATSPTDGAVTVVIVDEPGADRSYLLCLETALSGPVLIRRWRRR
                     HWIAFVFRVLKHLLATESCQAHSEDAYYGHLVLRLMASFVLFYTSRGVCKGRLTMEEI
                     IFSLKPYWRFVDMEPLGLQALS"
BASE COUNT          267 a          350 c          281 g          219 t
ORIGIN      
        1 aggcaagtgg tgaatacccg atgaatgctg gcttttatgg ggctccggga attgctgtgt
       61 tttttgttta aagttaacgc tttgcgtttt ttagaggcga tgcccaactc gaattttccg
      121 actgccaagc catcaaagta aaagcgccgg aaagcgcaaa agactgggtt ttccgtatga
      181 tgactttagc ctgtccccat gaggggttcc cacgcctgtc ctatgaaagt gcttgtaatc
      241 ctaggggttc catgtccaca aaacgccagt aaggcttcag gctaaagatg atctcctcca
      301 tcgtcaggcg gcctttgcag accccgcgcg aggtgtagaa caagacaaaa ctcgccatca
      361 ggcgtaacac caaatgccca taataggcgt cttcgctatg ggcttggcac gactcggttg
      421 ccaaaagatg cttgagcacc cgaaagacaa atgcaatcca gtggcgacga cgccaccttc
      481 gaatcaagac cgggccactc agtgctgtct ctaaacacag cagataggag cgatccgccc
      541 caggctcatc cacgatcacc accgtgaccg caccgtcagt gggactcgtc gcttgtaaac
      601 gcacatagca cacgccaggc tcccagggat gcgtgcgcca aggccactcg ccctcaagga
      661 aatcatgccc gcttacttgg cgtccatcgg ccaaggtaaa ggtataactg actttcccct
      721 ctaccaacag cgtgccttga tgccgatggc ggacatgccc catcaacttg gcgtcactga
      781 accaacgatc ggctgtgagg atgggcgggg gcaggtgcaa gccgcgcttg ataaaggcgg
      841 ccaggcgcgc atcgatcatc tcccgcgccc agctcagctt atctcgccaa gggcctccca
      901 cacccacggg gtcaggccga cgcacggcaa aatccaccgg caccaccaac ttgccatcgc
      961 caatgaccac cactcgtaag aggccatcaa tgcccgcgag cacgcggtgt tgctggccgc
     1021 tccaccaacg ccccactaac cccagctgct caccatactt gtggaacaca gaatcatcca
     1081 cggcccaggt ccactgccaa cgactttggg ttgcttc
//
LOCUS       DASQSL010000192         1307 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_28207, whole genome shotgun sequence.
ACCESSION   DASQSL010000192 DASQSL010000000
VERSION     DASQSL010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1307
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28207"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            176..1030
                     /locus_tag="VE844_01940"
     CDS             176..1030
                     /locus_tag="VE844_01940"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HZC00151.1"
                     /translation="MVTQTPTIDSQVHAYERNRPERPWVGFLTGPDEVTGDNMVAAMD
                     AVGVDGALLVSPFSLYRYDASYVLEVYAKHPSRFGLIKPFDPQSKTVADEIAEWAATP
                     GVVGARVMLAREPFQADDPGLNRIFAAAAQAGIPVNVACSGKLPLLGELARRNPHTQV
                     VIDHVGLAQPQEPPAPPEPFADLANVVSLAALDNVAIKISGACTLSHQPFPYPDIWEP
                     LGKVFDAFGFDRCLWGTDWTRAVKLLTYEQGVEAFRVTDQLSDSERSALMGGTLAKIY
                     NWSPGMSG"
BASE COUNT          266 a          349 c          399 g          293 t
ORIGIN      
        1 ccgacgagga catggctaga gtgggcttga atgcaatgaa tctgtaatca cctgggaccg
       61 tgctaagggt aaagagatac gtatcgccct caccttatcc tatgttgatg ggatatttgt
      121 ctgaggcttc cgggataatc acggccgact gatgactagg aaagaggtaa gaacgatggt
      181 aactcagacc cctacaattg actcacaagt acatgcctac gagcggaacc gtcctgagcg
      241 cccctgggtg gggttcttga cgggtccaga tgaagtgacc ggcgacaaca tggtggcagc
      301 gatggacgca gtcggcgtcg atggggcttt gctggtctcg ccattcagct tgtatcgcta
      361 cgatgccagt tatgtgctgg aggtatacgc aaaacatccg agtcgcttcg gcttgatcaa
      421 gccatttgac ccgcagtcca aaacggttgc tgacgagatc gccgagtggg cggcgacacc
      481 gggtgtggtc ggggcccgcg tcatgctggc tcgtgagcca ttccaagcgg atgaccctgg
      541 tctcaatcgc atattcgccg ccgctgccca ggccggcatc ccggtgaacg tagcgtgttc
      601 gggcaagctg cctcttttag gtgaactggc ccgccgcaat ccacataccc aggtagtgat
      661 cgaccacgtg ggtctggcgc agcctcagga gccaccagcg ccaccagaac cgttcgccga
      721 tctggccaac gtggtttcgc tggcagcact ggacaatgtg gctatcaaaa tttctggagc
      781 ctgtaccctg tcccaccagc cattccccta cccggacatc tgggagccct tgggcaaagt
      841 atttgacgca tttggatttg accgatgctt gtgggggact gactggaccc gggcagtgaa
      901 gttgctgacc tatgagcagg gtgttgaggc attccgggtc acagaccaac tctcggactc
      961 agagcgttct gcactcatgg gtgggaccct ggcgaagatt tacaactggt cgcctggaat
     1021 gagtgggtag attggcaatg gatttgtgca attgatacct atgtgaggac attcggaagg
     1081 tccggtgcaa accgagggag tcccgcttca ggtcgatttt ctagaacctc tttttgctgg
     1141 tgacgaggat gagcgcctac cgtcagggac gtaccccggg gatgttgagt cggatgcggt
     1201 aaatgctggt cttcgccgtc atgtagaggg tggtccggcc gtcctcatca ccccaggcca
     1261 ggttgtgtgg gttttctggc ccccggatga tgcccagcgc ctgtccc
//
LOCUS       DASQSL010000193         4053 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_1729, whole genome shotgun sequence.
ACCESSION   DASQSL010000193 DASQSL010000000
VERSION     DASQSL010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4053
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1729"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1032)
                     /locus_tag="VE844_01945"
     CDS             complement(<1..1032)
                     /locus_tag="VE844_01945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018867407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HZC00152.1"
                     /translation="MNIQFPRIERLPPYVFSTVHELKMQARYRGEDIIDFGMGNPDQP
                     TPKHIIKKLVEAVQREDTHRYSMSRGVPRLRKAICNWYKRRYNVDLDPESEAIVTMGS
                     KEGLAHLAMAVVDRGDVVLTPNPAYPIHPFGFVIAGADVRHIPIGPEVDFFAEIEKAI
                     RDCWPRPKMLVLNFPSNPTTQCVELPFFERVVAIAREHGIWVLQDLAYADLVFDGYKA
                     PSILEVPGAKDIAVEFFSLSKSYNMPGWRVGFMVGNPLLVKALAQLKSYLDYGTFTPI
                     QVAAIMALDGPQDCVAEIRDLYWKRRDMLCEGLCLAGWPIEKPRATMFVWAPIPEPYR
                     PLGSLEFSKK"
     gene            1102..2544
                     /gene="tldD"
                     /locus_tag="VE844_01950"
     CDS             1102..2544
                     /gene="tldD"
                     /locus_tag="VE844_01950"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018953679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HZC00153.1"
                     /translation="MSTALETARNQILTPSGMEEHDLQKVLDAMLGHAIDYADLYFES
                     TCTEAWVLEDGIVKEGSHHIDQGVGIRAVNGEKTGLAYSDEILPTALMEAAHAARAIA
                     TRGGQSQLQVWHRQEPLRFYTPLNPLSSMGEANKVQLLLEIDKAARGMDPRIGQVVVN
                     LTGRYSVLLIAASDGTLSADVRPLVRLNVSVVAEHGGRRESGTAGGGGRFGYNWFIEE
                     ERALGFAQEAVRQALINLESIPAPAGTLTVVLGPGWPGILLHEAIGHGLEGDFNRKGT
                     SAFTGRIGERVASPQCTVVDDGTLAERRGSLNVDDEGTPGQCTVLIEQGILKGYMQDK
                     HNAHLMGVAPTGNGRRESYAHRPMPRMTNTYMLAGSYTPEEIIASVDRGLYAVSFGGG
                     QVDIVNGKFVFSASEAYLIENGKVTRPVKGATLIGNGPEVLTRVSMVGNDLKLDTGVG
                     TCGKEGQSVPVGVGQPTLRIDGLTVGGTTL"
     gene            complement(2571..3704)
                     /locus_tag="VE844_01955"
     CDS             complement(2571..3704)
                     /locus_tag="VE844_01955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013032396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HZC00154.1"
                     /translation="MRKDELALVMSGGGARAAYQVGFLRCLAHHYPDLHIPILTGVSA
                     GAINAAYLASHSETFLDKAEVLTKLWEGLTTDHIFRVDPLSIAANVLRWGTRLLMGRA
                     SYAIRAHSLLSTQPLQSLLEHVFHPMDGKIPGIERNLARGDLKAVAITASNYSTGQSI
                     TWVQGRQITHWERAHRKSVPCHIGLDHILASASLPMFFPAVQIDNCWYGDGSIRLTAP
                     LSPAIHLGASRILAISTRYGRSREEADCPNIDGYPPPVQVAGAILNAIFLDVFDADAL
                     RLQRVNKLIAKLPEEEREGLRPIKMLLLRPSRDLGKLANEYEPRLPHAFRFMIRGLGT
                     GETRSNDLLSLLMFQPDYLKRLIELGQEDAEAHREKIASFLAD"
     gene            complement(3691..>4053)
                     /locus_tag="VE844_01960"
     CDS             complement(3691..>4053)
                     /locus_tag="VE844_01960"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZC00155.1"
                     /translation="KMSEIQELEIAAVASASKSNFDKAIKIMRKATALEEAMPPPPGP
                     PTVIKPSHELFGEILLRAGRPKEAAAQFETSLRRHKNRARSLLGAARAAAQSGDTQGA
                     AKAYTQFSQQWQPGDEKR"
BASE COUNT          887 a         1148 c         1228 g          790 t
ORIGIN      
        1 ctttttggag aattcgagcg atcccaaagg gcggtagggc tcggggatag gcgcccagac
       61 aaacatagtg gcgcgtggct tctcgatcgg ccagcccgcc aaacaaagtc cctcgcacaa
      121 catatcccgg cgcttccagt agagatcccg gatctccgcc acacagtctt gcggcccatc
      181 gagcgccatg atcgccgcca cctggatggg ggtgaaggtg ccataatcga gataggattt
      241 aagctgggct aaggccttga ccaggagggg gttgccgacc ataaacccaa cccgccagcc
      301 gggcatgttg taactcttgg acagcgagaa gaactcgaca gcgatgtcct tggccccagg
      361 cacctccagg atcgagggcg ccttgtaacc gtcgaacacg aggtccgcgt aggccagatc
      421 ttggagcacc cagatcccat gctcgcgggc gatcgcgacg acccgctcaa agaacgggag
      481 ctcgacgcac tgcgtggtgg gattgctcgg gaaattgagc accagcatct tgggccgagg
      541 ccagcaatcg cggatggcct tctcgatctc ggcaaaaaaa tcgacctccg gcccaatggg
      601 gatatgacgc acatcggctc cggcgatcac aaacccgaag ggatggatcg gataggctgg
      661 attcggcgtc aacacgacat cgccgcgatc gacaaccgcc atcgccagat gcgccagccc
      721 ctctttcgag cccatggtca caatcgcctc ggattcgggg tccagatcca cattgtagcg
      781 gcgtttgtac caattgcaga tagccttgcg cagtctcggg accccacgcg acatcgaata
      841 gcgatgggta tcctcccgct gtaccgcttc gaccagcttt ttgataatat gtttgggcgt
      901 cggctggtcg ggattaccca tgccaaaatc gatgatatcc tccccgcggt agcgggcctg
      961 catcttcaat tcgtgaactg tgctaaagac atacggcggt agacgctcta ttcttggaaa
     1021 ttggatgttc aattttatat aaaccgttat ctaaattgtc acaagactta aactatatca
     1081 aatcttgaga gagacagtcc tatgagcact gccctagaaa ccgctcgaaa tcaaatttta
     1141 acgcctagcg ggatggaaga acacgacctc caaaaggtat tggatgccat gcttggccat
     1201 gccatcgact atgcggatct ctattttgaa tccacgtgca ccgaggcttg ggtattggaa
     1261 gatgggatcg tcaaggaagg cagccaccat atcgaccagg gggttgggat ccgggctgta
     1321 aatggagaga agacgggcct cgcctactcc gatgagatcc tgcccaccgc tctcatggag
     1381 gcggcgcatg ccgcccgggc catcgctacc cgcggcgggc agagtcaact tcaggtatgg
     1441 cataggcagg aaccgcttcg tttctatacc cccctcaatc cgctcagttc aatgggtgag
     1501 gcgaataagg tccaactgct tttagagata gataaagccg cacgcggcat ggacccgcgg
     1561 atcggccaag tggtggtcaa cctcacggga agatacagcg tcctgttgat tgcggcgagc
     1621 gacggtactt taagcgccga tgtacggccg ctggtccgac tcaacgtcag cgtcgtggcc
     1681 gagcacggtg gccggcgtga atcgggtacc gcaggaggcg gtggccgctt cggctacaac
     1741 tggtttatcg aagaagaacg ggcgctcggt ttcgcacaag aagcggtacg ccaggcgctc
     1801 atcaacctgg aatcgatccc ggctccggcc ggcaccctga cggtggtatt aggccccggc
     1861 tggcccggga tcctgttaca cgaggcgatc ggccatgggc tcgaaggtga ttttaaccgt
     1921 aaagggacct ccgcgttcac cgggaggatc ggtgagcggg tcgcctcacc ccaatgcacg
     1981 gtggtcgatg atggcaccct ggccgagcgg cgcggatccc tcaacgtcga tgacgaaggt
     2041 acacccggcc aatgcaccgt cttgattgaa caggggatcc tcaagggcta catgcaggat
     2101 aaacacaacg ctcatcttat gggggtcgcg ccgaccggca acggtcggcg ggaatcgtat
     2161 gcccaccggc cgatgccgcg catgaccaac acctacatgc tggcggggag ttacactccc
     2221 gaggagatca tcgcctcggt cgatcgcggg ctttatgcgg tgagcttcgg cggcggacag
     2281 gttgatatcg tcaatggcaa attcgtcttt agcgccagtg aggcctatct catcgaaaac
     2341 ggtaaggtga cgagaccggt taaaggcgcc acacttattg gcaatggtcc ggaggtccta
     2401 acgcgcgtct cgatggtagg caatgatctc aagctcgata cgggggttgg tacctgcggc
     2461 aaagaagggc agtcggtgcc tgtaggcgtg ggccagccca cgctcaggat cgatgggctg
     2521 acggtaggag ggacaaccct gtgaacctcc ttatcatgta ccgccaaacc ctaatccgct
     2581 agaaaactgg caattttctc ccggtgcgcc tcggcatctt cctgccccaa ttcgatcagc
     2641 cgcttcaggt agtctggctg aaacatcagc aggctcagga gatcattcga acgcgtctcc
     2701 ccggtgccga ggccccggat catgaagcgg aaggcgtgcg gcaatctggg ctcgtattcg
     2761 ttggcaagtt ttcccaggtc ccgcgagggc cgaaggagaa gcatcttgat cggacgcaat
     2821 ccttcacgtt cctcctcagg cagcttggcg attagcttat ttacgcgctg gaggcgcaga
     2881 gcatcggcat cgaatacatc gagaaaaatg gcattgagga tcgcaccggc cacctgcact
     2941 ggcggtggat agccatcgat gttgggacag tcggcctcct cgcggctgcg tccatagcgg
     3001 gtcgagatag ccaggatgcg gctggcccca aggtgaatgg caggggagag gggagcggtc
     3061 agacgaatgc tgccatcgcc ataccagcaa ttatcaatct gcaccgccgg aaaaaacatg
     3121 ggcagcgagg ccgaggcaag gatatggtct aagccgatat ggcagggaac actcttgcga
     3181 tgggcccgct cccagtgcgt gatctgtcgg ccttgcaccc aggtgataga ctgaccagta
     3241 gaataattcg aggcggtaat ggccacggcc ttaaggtcgc cgcgagcgag attgcgctca
     3301 atacccggga tcttgccatc catagggtgg aacacgtgct cgagcagaga ctggagcggc
     3361 tgggtgctga gcaggctgtg ggcgcggatg gcatatgagg cccgacccat gagcaggcgc
     3421 gtgccccagc gcagcacatt ggcagcgatg gatagggggt cgacgcggaa aatgtggtca
     3481 gtagtgagcc cttcccagag cttggtaagg acttctgcct tgtccaggaa tgtttccgag
     3541 tggctagcaa gataagcggc gttgatagcc cctgccgaga cacccgtgag gataggaata
     3601 tgaagatccg gatagtggtg agcgaggcag cggaggaaac ctacttgata agcagcacgc
     3661 gcccccccgc cactcatcac caatgcaagc tcatcttttc tcatcacccg gctgccactg
     3721 ctgcgagaat tgagtgtagg ctttggccgc gccctgtgtg tctccgctct gagcggcggc
     3781 gcgcgccgcg cccagtagcg aacgcgcgcg gttcttatgt cggcggagcg aagtctcaaa
     3841 ctgcgctgcg gcttctttgg gacggcccgc gcgcaagaga atctcgccga acaattcgtg
     3901 cgagggtttg atcacagtgg gtggcccagg agggggcggc atcgcttctt ccagcgcagt
     3961 ggccttccgc atgattttga tcgccttgtc aaagttgctc ttcgaggcac tggccacggc
     4021 ggcgatctcc aactcctgaa tctccgacat ctt
//
LOCUS       DASQSL010000194         1458 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_97071, whole genome shotgun sequence.
ACCESSION   DASQSL010000194 DASQSL010000000
VERSION     DASQSL010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1458
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97071"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            165..>1458
                     /locus_tag="VE844_01965"
     CDS             165..>1458
                     /locus_tag="VE844_01965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018217230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HZC00156.1"
                     /translation="MQDELATGGSKLTGRLVFPNSPNYESARLGWARQFSKFPLVIVF
                     CQNVQDVVNAISWCREHDVAFRARSGRHALEGWSSLDGGVVIDVSDMNQIHIDERAEV
                     ATVQTGATQGAVVDALGRIGYTIPSGGEADPGIAGVLLGGGIGLLARSMGLACDHLLG
                     VEMVVPFGNQGAQVIQADEHNNADLLWASRGGGGGNFGIATSFTLNIRPISTVTIYEA
                     TWDWQHLSELLSVWQDLVPSADDRLGSVFAASSEEGGTITSYGMFIGSEEARLRDLLQ
                     PLLGIGKPEVTIEAMSYLDAFKHFAYPTDPPKKDKFSSVWLYDALPSEAIETVRSFLT
                     DAPADEANIWCLSWGGAVGRIPTGDTAFFHRKARYYIEWDTPWKDAGEEKDAITWVER
                     FRVAMGPYAEGSYVNVPDRTINDWPSAYYGDNFARLREV"
BASE COUNT          297 a          416 c          453 g          292 t
ORIGIN      
        1 tacagctggt ggtcggagaa tccccattac gcgaagagct ttgccgtttt cgcaaaggtt
       61 aaaaacgttc tcttcgggag gtagcggaat ctcccgcttc ggtgtatggt tgtaagaata
      121 gctgcaagcg ccggaagaaa gcggggcaag gggagggcgc caaaatgcag gatgagctcg
      181 ctaccggtgg gagtaaactc acgggtcgtc tggttttccc caatagtccc aactatgaga
      241 gcgctcgtct ggggtgggcc cgacagttct ctaaattccc cctcgtaatc gtcttttgtc
      301 aaaacgtcca ggatgtcgtt aatgctatca gttggtgccg agagcacgat gtagcctttc
      361 gcgcccgaag cggtcggcat gccctggaag gctggtcctc tctggatggt ggggtggtca
      421 ttgacgtaag cgatatgaac cagatccata ttgatgagcg cgcggaggtg gctactgtgc
      481 agaccggcgc cacccaaggg gcggtcgtgg acgcactggg gcggatagga tacaccatcc
      541 ccagcggagg agaggcggac cccggtatcg ctggcgtcct cctcggcggg ggtatcggcc
      601 tgctcgcccg aagcatgggt ctggcctgcg atcacttgct tggcgtcgaa atggtggtcc
      661 ccttcggcaa tcagggtgcc caggtgatac aggccgacga acacaacaac gccgacctcc
      721 tgtgggcttc acgcgggggc ggaggcggca acttcggcat agccacctcc ttcaccctca
      781 atatccggcc tatctccacc gtcacgatct acgaagcaac atgggattgg caacacctga
      841 gcgagctatt gagcgtctgg caggacctgg tgccctctgc ggacgatcga ctgggctcgg
      901 tcttcgccgc gtcttccgag gaggggggca ccatcacctc ctatgggatg ttcatcggat
      961 cggaggaggc gcggctgcgc gatctgctcc aacccctgct tgggatcggc aagcccgaag
     1021 ttacgatcga agccatgtcc tatctcgatg ccttcaagca cttcgcctac cccaccgatc
     1081 cgccgaaaaa ggacaagttt tcctcggtct ggctctatga cgctttacca tctgaggcaa
     1141 tcgagaccgt acgcagtttc ctgacggacg ctcctgctga cgaggccaat atatggtgct
     1201 tgagctgggg cggggcggtg ggccgaatac cgaccggaga cacagcgttc tttcatagga
     1261 aggcacgcta ctacatcgag tgggacaccc cgtggaaaga cgccggtgag gagaaagacg
     1321 ccatcacgtg ggtcgagcga ttccgggtgg cgatgggccc ctatgccgaa gggtcctacg
     1381 ttaacgttcc cgaccgcacc atcaacgact ggccaagcgc ctactacggg gacaactttg
     1441 ctaggctccg ggaggtca
//
LOCUS       DASQSL010000195         1263 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_83377, whole genome shotgun sequence.
ACCESSION   DASQSL010000195 DASQSL010000000
VERSION     DASQSL010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1263
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83377"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            17..>1263
                     /locus_tag="VE844_01970"
     CDS             17..>1263
                     /locus_tag="VE844_01970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00157.1"
                     /translation="MHTPEELEALERELRGYTDQLCALLLELHLQASLDCEEHPKKEE
                     ELIRCWPGRLKSDGYERVRIFTLGGVWITVRAHYYCRACDRRSGKRHKGVYGGLVLLG
                     IHDHCTPALAATVSAWSALLSSFAEVRQVLVEQGVKLDVKGVRRVAYRYAERARVLQQ
                     AGQIVMAEGDTVQGRRVVVSVDGGRLRLRENKRGAKTQKGRTRYRGAWREPKLLIIYV
                     VDARGKLEKSFAPLIDGHLQGPGALFQLLEGYLHSLAIDRADHVLFVADGAHWLWNRI
                     PKLIAALGLEPQRVHQLIDFYHATEHLGKLAALRKNWSARQRHAWIRTQRRRLWAGHV
                     AQVVEAIQVFCRGRNSKAMMRERDYFVGNRQRMAYQTIRALKLPIGSGAIESAIRRVV
                     NLRLKGACIFWGKDNAEKILMLRA"
BASE COUNT          262 a          294 c          450 g          257 t
ORIGIN      
        1 gcaggagcgg cgtcgagtgc atacgcccga ggaattggag gcgctagagc gggagcttcg
       61 tgggtatacg gatcagttat gtgcgttgct gctggagctg cacctgcaag ccagcttgga
      121 ttgtgaagag cacccgaaga aggaagagga actgatacga tgctggcctg gacggttgaa
      181 aagcgatggc tacgagaggg tacggatttt tacgctgggg ggtgtttgga tcacggtccg
      241 ggcccattac tactgtcgtg cctgtgatcg gcggagtggg aagaggcata aaggggtgta
      301 tggaggtctg gtgctgttag ggatccatga ccattgcaca ccggcattag ccgcgaccgt
      361 gagtgcgtgg tcggcattgc tgagctcgtt tgcggaagtg cggcaagtgt tggtggagca
      421 gggtgtaaaa ctggacgtca agggggtgcg gagagtggcc taccgctatg cggagcgggc
      481 gcgcgtgttg cagcaggcgg ggcaaattgt gatggctgag ggagacaccg tgcagggacg
      541 tcgggtggtg gtaagtgtgg atgggggtcg cctgcggcta cgagagaaca agcggggcgc
      601 caagacccag aaggggcgga cccggtaccg gggagcttgg cgtgaaccga agctcttgat
      661 catctatgtg gtcgatgcgc gcgggaaact ggaaaagagt tttgccccgt taatcgatgg
      721 ccacctccaa gggccggggg cgttgttcca actcctcgag ggctatttgc actccctggc
      781 cattgaccgg gctgaccacg tcctgttcgt ggcggatggc gcccactggc tgtggaatag
      841 aatcccgaag ttaatagcgg cgctcggttt ggagccccag cgcgtccatc aattgattga
      901 cttctatcat gccacagagc atttggggaa gctggccgcc ttacgtaaaa actggtcagc
      961 ccggcaacgc cacgcctgga tccgaaccca acgccgtcgg ttgtgggcgg gtcacgtcgc
     1021 tcaggtggtg gaagccatcc aggtgttttg tcgcgggcga aacagcaaag cgatgatgag
     1081 ggaacgggat tattttgttg ggaatcgaca gcggatggct taccagacca tacgggcgct
     1141 gaagttgccc atcggcagtg gtgccatcga aagcgcaatt cgccgagtgg ttaatctacg
     1201 cctcaaaggg gcgtgtatct tttggggcaa ggataatgcc gagaaaatac tcatgctccg
     1261 cgc
//
LOCUS       DASQSL010000196         1025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_97091, whole genome shotgun sequence.
ACCESSION   DASQSL010000196 DASQSL010000000
VERSION     DASQSL010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97091"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1025
                     /locus_tag="VE844_01975"
     CDS             <1..>1025
                     /locus_tag="VE844_01975"
                     /inference="COORDINATES: protein motif:HMM:NF014581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /protein_id="HZC00158.1"
                     /translation="EAGLLLGVSAFNQILAVRRTPKRRELGNVLVDALTRGGKGLLAI
                     SQLLTWPHSAVVVDIKGELYEATAGYRKTLGPVYVIDPEGVGNRFDPLHGRVTEQKLY
                     ASAKYLLYQAGERDPIFIERAIRMVTQLFLAGREENRQAGFEKYRLLPYAGQLMNLPI
                     NQVAAHLRAVNPLRATTFLSALYDPEKDYDEKRFLTSCWETATARLYPILSEDILRCF
                     NGSDFTTEGLLTSQSPITVYLRLPEGDLKALSPVVRLLSQTIIHDGITTYDKRKGEGC
                     YPLLLLLDEAGRVKIPDLDEYATTVVGRQISLWVAIQSIKQLEVYGEANTETLLDNMD
                     TQIFYRQ"
BASE COUNT          220 a          299 c          286 g          220 t
ORIGIN      
        1 tgaggcaggc ttacttttgg gcgtctccgc cttcaaccag atactcgccg tccggcgaac
       61 gccaaagcgg cgggaattgg gcaatgtcct ggttgatgca ttaacccgcg gcggcaaagg
      121 cttgctggcg atctcgcaac tgctgacctg gccgcattcg gcagtggtgg tggacatcaa
      181 aggcgagctc tacgaggcca ccgcaggcta tcgtaaaacc ttggggccgg tctatgtcat
      241 tgaccctgaa ggcgttggga accggtttga ccccctgcat ggccgggtga ccgagcagaa
      301 gctctacgcc tccgccaaat acctgctgta tcaggcaggg gagcgcgatc cgattttcat
      361 tgagcgggcg atacggatgg tgacccaact cttcctcgca ggccgtgagg agaaccgaca
      421 ggcgggtttt gaaaagtacc ggcttttacc gtatgccggg cagctgatga atctgcccat
      481 caatcaggtg gcagcacatt tgcgggcggt gaacccgctt cgtgccacca catttctctc
      541 cgctctctat gacccggaga aagactatga tgaaaagcga ttcttaacct cctgctggga
      601 gactgcgact gcacggctct accccatcct ctccgaggac atcttacgct gtttcaacgg
      661 ctcggatttc accaccgagg ggctcctgac ttcccaatcc cccatcaccg tgtatctcag
      721 gttgccggag ggcgatctga aagcgctctc tcccgttgtg cgcctcttgt cccaaacgat
      781 cattcatgat gggatcacga cctatgacaa acgcaagggc gagggctgtt atccgcttct
      841 tctccttctt gatgaggcgg gacgggtgaa gatcccagac ctggacgagt acgcgaccac
      901 cgtggtcggg agacaaataa gcctgtgggt tgccatacaa tccatcaagc agcttgaggt
      961 ctacggcgag gcaaacactg agacactgct tgacaatatg gacacccaga ttttctaccg
     1021 gcaac
//
LOCUS       DASQSL010000197         1814 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_15643, whole genome shotgun sequence.
ACCESSION   DASQSL010000197 DASQSL010000000
VERSION     DASQSL010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1814)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1814)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1814
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15643"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..816)
                     /locus_tag="VE844_01980"
     CDS             complement(<1..816)
                     /locus_tag="VE844_01980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004174316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HZC00159.1"
                     /translation="MGYLPIFVNLKGKSCLVVGGGEVAARKVMQLLKAQGRITVIAPR
                     LCQALIELGEKELITYKQTEFSPAHLEGAWLVIAATNDFNLNRTISDLAEQRNRLVNV
                     VDAPLLCNFIMPSIVDRAPVQIAISTGGASPVLARLLKARLEALIPAAYGRLAAVMAA
                     FRDRAKRTFPDTNTRRRFWEKVLHGPVAEMLFAGQEKPALATLERLFEDESTEPEMLG
                     EVYLVGGGPGDPDLLTFRALRLMQQADVVLYDRLVAPAILDLARKDAERIYVGK"
     gene            894..1514
                     /locus_tag="VE844_01985"
     CDS             894..1514
                     /locus_tag="VE844_01985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010959855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclodeaminase/cyclohydrolase family protein"
                     /protein_id="HZC00160.1"
                     /translation="MIKDQSIQVFLNELASKASTPGGGSAAAIMGAMGAALVSMVCNL
                     TIGKKNYAEVEEELKSVLARAEAVRERLTDMIRADIEVFDQVMGAYGLPKDTEEQKAA
                     RSHAIQVALKAATEVPLDCARACLEIIKLSQIVAEKGNLNVISDAGVGVLAAYAALRS
                     AALNVYINAKGIKDEAFAKARLAELEKILEGMDTLTESIYQRVTSS"
BASE COUNT          411 a          484 c          546 g          373 t
ORIGIN      
        1 tttgcccaca taaatacgtt cagcatcctt gcgggccaga tccaggatcg caggcgcaac
       61 caatcgatca taaagcacca catcggcctg ttgcatgagc ctaagcgcac gaaaggtcaa
      121 gagatcggga tcacccggtc caccgccgac cagatatacc tcgcctagca tctcgggctc
      181 tgtagattca tcttcgaaga gtctctcgag ggtggcgagg gccggctttt cttggccggc
      241 aaacagcatc tcagcgactg gaccgtggag gaccttttcc cagaagcggc ggcgcgtgtt
      301 cgtatccgga aacgtgcgct tcgcccgatc ccggaatgcc gccataaccg cagccagccg
      361 tccataagcc gccgggatca aggcctcgag gcgtgctttg agcagccttg ccaggaccgg
      421 cgaggcgccg ccggtcgaga tcgcgatctg taccggggcg cggtccacaa tggagggcat
      481 gataaagttg caaagcagcg gcgcatcgac cacattgact agcctattgc gctgctcggc
      541 gagatcagag atagtccggt tgagattgaa atcattggtc gcggcgatga caagccaagc
      601 accctccaga tgggcgggac tgaattcggt ctgtttgtag gtgatgagtt ccttttcacc
      661 gagttcgatc aaggcctggc atagtcgggg cgcgatcacc gtaatccggc cttgggcttt
      721 taacagctgc atcaccttgc gggcagccac ctcaccgccg ccgaccacaa ggcaggattt
      781 gcccttgagg ttaacaaaga taggtaggta acccattcaa cagcgccttg taaatgcaag
      841 ttccccttaa gtaagcttat accacacaac aatcacttct gcaggagaac cctatgataa
      901 aagaccaatc catacaagta ttcctcaatg agcttgccag caaagcctcg acgccgggcg
      961 gaggaagtgc ggcggcgatc atgggggcga tgggcgccgc cttggtaagc atggtgtgta
     1021 acctcacaat cggcaagaag aattacgccg aggtcgagga ggaattgaaa tccgtgcttg
     1081 ctcgggcaga agcagtgcgc gaacgcctga cagatatgat ccgggcggac atcgaggtct
     1141 ttgaccaagt catgggtgct tatggcttgc ccaaggatac ggaggaacag aaggctgccc
     1201 gtagccatgc catccaagtt gcattgaagg cggccaccga ggtgccgctc gactgcgccc
     1261 gggcttgcct tgaaatcatc aagctcagcc agatcgtggc cgaaaaaggt aacctgaacg
     1321 tgatcagcga tgcgggggtg ggggtgcttg cggcttatgc ggctttgcgg agcgcggctc
     1381 tgaatgtcta catcaatgcc aagggcatca aggatgaggc gttcgccaaa gcgcggctag
     1441 cggagttgga gaagatcctg gaagggatgg atactttgac ggagagtatc tatcaacggg
     1501 tcaccagctc gtgatcgtgc ggcttggact gagccggctc aaaggcgctt gggatcatga
     1561 aacatttatc gccgggatag tgcggtctat cccagatcca acagcgcgtg ctcgattgag
     1621 ccactgatgt atccctaagc ggtcggaggg tccttgatat ctatactggt tacagctttg
     1681 gtcattggta tcattgggtt agggttcggt ggactggcgt tgaatcgtcc gcctctgggt
     1741 gatccaccgg gagtatgggc gaggcttgca acctattttg gttctcatgt ggccgagacc
     1801 cgcgagcaga gccc
//
LOCUS       DASQSL010000198         1113 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_42803, whole genome shotgun sequence.
ACCESSION   DASQSL010000198 DASQSL010000000
VERSION     DASQSL010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42803"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..765
                     /locus_tag="VE844_01990"
     CDS             <1..765
                     /locus_tag="VE844_01990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018930475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HZC00161.1"
                     /translation="AEHEAGVRVMVGYMRRFAPAFSLAAEEVKTLGKINYVRIRDIIG
                     RAPLIIPESSVVHRFDDVPEEAVRDRSERAKSLVREAIGDVTEDLGSAYRLLCGLSSH
                     DISAMRELIGVPKRVVAAAQWNGGRFISALFEYDGYYASFETGVDGQRRFDAHIEVYG
                     EAKSLRVQYDTPYLRHLSTTLNISETVDQTHKETLMRPTFEDPYVYEILHFYDVVAKG
                     AHPKTTPEDFKADLDIFGMIMDALKHEKRHTGQEVH"
BASE COUNT          279 a          286 c          337 g          211 t
ORIGIN      
        1 gcggaacacg aagccggtgt ccgggtcatg gttggctaca tgaggcgatt cgcgcccgct
       61 ttctcgttgg cggccgaaga ggtcaagact ctgggtaaga tcaactacgt cagaataagg
      121 gacatcatcg ggcgcgcccc gttgataatc ccagagtcca gtgtcgtgca ccgtttcgac
      181 gacgtcccgg aagaagcggt aagggacagg tcagaacggg cgaagagtct agtgagggaa
      241 gcgatcggtg acgtcaccga agatttgggc agcgcttaca ggctgctgtg cgggctgagc
      301 agccacgaca tctcggcgat gagagagctg atcggcgtcc ccaagcgcgt ggtcgctgcg
      361 gcacagtgga acggagggcg attcataagc gcgctcttcg agtacgatgg ctattacgcc
      421 agtttcgaga cgggagtaga cggccagagg cgcttcgacg cgcacatcga agtctacggc
      481 gaagcaaaat ccttgagggt ccagtacgat acaccttact tacggcacct gtcgacaacg
      541 ttgaacatca gcgagaccgt ggaccaaacc cacaaggaaa cgctgatgcg gcccaccttc
      601 gaggacccct atgtgtacga gatcctgcac ttctacgatg tggtggcgaa gggcgcgcac
      661 cccaagacga cccccgagga ctttaaggcc gacctcgaca ttttcgggat gattatggat
      721 gctttaaagc atgagaaacg ccacactggg caggaggtcc actagattga gcgagccgaa
      781 gggcggcgga agacgagggt atcccattag acgagctagg cgagcgcatg tacgtgtctt
      841 gcttctggtg cctctcaggt tgagggaagc tgtgtcaaca gtagtgcagc agtaggggtg
      901 acaccaaacg atatctgacg atactttaca gacaaaagag ccgcatgttt ataagggttt
      961 accgcatacc taaaggactc ggtaaatgac tgaaaatcat ggtgtcctcg gttcgaatcc
     1021 gggtcccgcc acttcttaaa gtcctgcaaa acacagaaaa gtatgaaggg caccgataag
     1081 cgctggagcc ccgtttactg caaccgtact gca
//
LOCUS       DASQSL010000199         1417 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_70269, whole genome shotgun sequence.
ACCESSION   DASQSL010000199 DASQSL010000000
VERSION     DASQSL010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1417
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70269"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..508)
                     /locus_tag="VE844_01995"
     CDS             complement(<1..508)
                     /locus_tag="VE844_01995"
                     /inference="COORDINATES: protein motif:HMM:NF014762.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent transcriptional regulator"
                     /protein_id="HZC00162.1"
                     /translation="MATSSSKIPQAIEDYLVAIYVLGREGLTVISARVAEHVGVSPVT
                     MHEMVRRLTQSGYVTIDRKKQLRLTPEGQQVAESVYRRHTLAERLMTDVLGLDWAQAH
                     REAHRFEHVISPLIEERLAELLKYPQTCPHGNPIPGMHVPLVEESVPLATVAEGTRAE
                     VARISEEAE"
     gene            795..>1417
                     /gene="bamD"
                     /locus_tag="VE844_02000"
     CDS             795..>1417
                     /gene="bamD"
                     /locus_tag="VE844_02000"
                     /inference="COORDINATES: protein motif:HMM:TIGR03302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0065003 - protein-containing complex
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HZC00163.1"
                     /translation="MCVDRRQSRQPWTWRLGYLLVVVVLAGGCASSGAARRSADEWYE
                     LGQRELARGKYTRAEEAFSKFLEQHPQDRRRPEAMMGLADAMYADERYEEAKFQYRRF
                     LELYPANPDAAKAQFRSAMCSFQRVKTIDRDQSVTHEALQEFQRLIQSYPRSPFVEEA
                     QEKLAACRERLAAYELYVGRYYFRQDAYPAAISRFEGLLKVYPEVSFA"
BASE COUNT          288 a          419 c          408 g          302 t
ORIGIN      
        1 gctccgcttc ctcactgatc cgggcgacct cagccctcgt cccctcagcg acggtggcta
       61 acgggacgct ttcctcgact aaggggacgt gcatgccggg gatcggattg ccatgtggac
      121 atgtctgcgg atatttgagc aactcggcta gacgctcttc gataagcggc gaaatgacgt
      181 gttcaaagcg atgggcttcg cgatgcgctt gcgcccaatc gagccccaac acatccgtca
      241 tcaagcgctc cgccaaggta tggcggcggt agacgctctc agcgacctgc tgcccttcgg
      301 gggtgaggcg tagctgtttt ttgcgatcga tggtcacata gccactctgg gtcagccgcc
      361 ggaccatttc gtgcatggtg accggcgaaa ccccaacatg ctctgccacc ctagcactga
      421 taacggtcag cccttcccgc ccaaggacat agatcgccac taaataatcc tctatggcct
      481 gcgggatttt cgatgatgag gtggccatgc tctctccttc ataacgacga aattttggtg
      541 ggccaaattt catacgtttg ccattataca ggcaatgcgt atgcaacaca agtagaagtc
      601 tccctcgacc acctggcctc tgggatcgag ccatgtgtct ggggcgtttg ggtaaaacct
      661 tttcccttga caaccttctt ggagctttct atgataccca cgcgtgtaaa gccgcatcgc
      721 gactgaagcc gcgtcaacac tgtgtttatc cggaagagcg tgcgatgtcc caggagcgac
      781 tatcaccgtc tgtgatgtgt gttgaccgcc gtcaatccag gcagccgtgg acctggcgtc
      841 tgggttacct gcttgtcgtc gtggtgctgg cagggggctg cgcgagctca ggagcggcac
      901 gtcgtagtgc cgacgaatgg tatgaactcg gccaacgcga gctggcccgg gggaaataca
      961 cgcgggccga ggaggctttt agtaagttcc tcgaacaaca cccacaggat cgacgccgtc
     1021 cggaggccat gatggggctc gccgatgcga tgtatgcaga cgagcgctac gaagaggcca
     1081 aattccaata tcggcgcttc ctggagctct acccggcgaa ccctgacgcg gcgaaagcgc
     1141 agtttcgcag cgccatgtgt tcgttccagc gggtgaaaac catcgatcgc gatcaatccg
     1201 tcacccacga ggctctgcaa gaatttcagc gcctgatcca gtcctacccg cggagtccgt
     1261 tcgtcgaaga agcgcaggag aaactcgcgg cgtgccgtga gcgtctcgcg gcctatgagc
     1321 tctatgtggg ccgctactat ttcaggcagg atgcctaccc tgcagccatc agccgcttcg
     1381 aaggactgct aaaggtctat cccgaggtga gcttcgc
//
LOCUS       DASQSL010000200         2602 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_165734, whole genome shotgun sequence.
ACCESSION   DASQSL010000200 DASQSL010000000
VERSION     DASQSL010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2602
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165734"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2501
                     /locus_tag="VE844_02005"
     CDS             <1..2501
                     /locus_tag="VE844_02005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00164.1"
                     /translation="IAVPHTGGSPFITAMTKTVYRLGYPLIAPLLGLIRFLSQGAKDW
                     GWNDLMVALRWQDPWLLELEEEFLTQQGSAMALDIPCPMVHDLYAKSDLSVPLAADLT
                     QRNIYFRGTHGSVKVPHQANDPIVAIVASFVGRYGADLGLLVTDRTLARIAEVNKVTG
                     THSLIGATNGEQVRKRASPTVKTSSFGTQIEICDKLRERVRAGSERPRQIVVTGVAGV
                     GKSTVLRMIAGRLGCDYLANPDQNPLPLLLPLQQVTLEKATEEIYSWKMLWQWWTHWA
                     RSLYPGLDDRIGEWLEERFRTTATTVILDGLDDFLVNHSLIGLSSIVTILRDAVNRYA
                     SNPRFSIIVGIRSGVHGLQRLATDPKDIYEVLRLSVYQAEQVFPACRRWLPCVTDHGL
                     LDLVLTPLILSNYEPEVNGEIDPRSLSQSSIMDQTIRTILRRSGLIGIRTQGGQIAEI
                     DHLMLALTLIAWLFFYRHRGEIEMEALREEARMIREQWALFFQDQHPIAEAQDVTLGF
                     RLVEEASICNAILQRTVFVSTGSSRVRFTHRSWQEFLLAQYFVLCLRWGHVENFGITA
                     FNSHIYRMAGESFKDSTITEDQIRAVLASWRNSHNTYISGNVIAFLAWTRTAIDPRAI
                     QLLLNELANFEALSRVVLIAGLGYRVLVNDPKDPSVGDLRRMLFPKLGEFSNPQTAPV
                     DDPVACSLAWCYRKAFAGIFGMRQPEIPWPAIGFDEAETLKALPMICTVCDGERVLDA
                     RSRSLQLAFLVPILDAYTDPNLAIRALHYLYYLVVARRHEVHVFELSQELPQILASGG
                     RFEKIIESFTLVPEALELFRRCQAAHSALESAVA"
BASE COUNT          544 a          732 c          737 g          589 t
ORIGIN      
        1 atatcgcggt tccgcacaca ggcggttccc cgttcatcac ggcgatgacg aaaaccgtct
       61 accgtttagg ctatccgtta atagctcccc tgctagggct tatccggttt ctaagccagg
      121 gagcaaaaga ctggggatgg aacgacctta tggtggcgct gcgctggcag gatccctggt
      181 tactggaact cgaagaggag ttcctcacgc agcaaggttc cgcgatggcg ctggatatcc
      241 cctgcccgat ggtccatgac ctctatgcaa aatcggacct ctcggtcccg ctcgccgccg
      301 atctaaccca gcgcaatatc tacttccgcg gcacgcatgg ctccgtcaag gtccctcatc
      361 aagccaatga tcccatcgtg gctatcgtgg cgagctttgt cggccgttat ggcgctgatc
      421 tcgggctgct cgtgaccgac cggacgctgg cacggatcgc cgaggtcaac aaggtcaccg
      481 gaacccattc attgattggg gcaaccaatg gcgagcaggt ccgcaagcgc gcgtcgccca
      541 ccgtcaagac ctcctcattc gggacccaga tagagatctg cgataagctt agggaacggg
      601 tacgtgccgg gagtgaacgg cctcggcaga tcgtcgtaac cggggtcgcc ggggtaggca
      661 agtcgaccgt tctccgcatg atcgccgggc gtctgggctg tgactatctg gccaaccccg
      721 atcaaaaccc gcttcccctc ttgctgcctt tacagcaggt taccttagag aaagcgacgg
      781 aggagatata ttcctggaag atgttatggc agtggtggac ccactgggcg cgatccttgt
      841 atccgggtct ggatgatcgc atcggcgagt ggttggaaga gcggtttcga actaccgcga
      901 cgaccgtgat cctggatgga ctcgacgact ttctggtcaa tcattccctc attgggctct
      961 cgtccatcgt cactattttg cgcgacgccg taaatcgata tgccagcaat ccccggttct
     1021 cgatcatcgt aggcattcgc agcggcgtcc acggcctgca gcggttagcg accgatccga
     1081 aggatatcta cgaggtcctg cggctttcgg tctaccaggc ggagcaggta tttccggcct
     1141 gtagacgctg gttgccttgt gtgacggacc acgggctact cgacctggtg ctaacgccgc
     1201 ttatcctgtc caattacgaa cccgaggtga acggtgaaat cgatccccga tcgctcagcc
     1261 agtcttcgat aatggatcaa accatccgga cgatcctgcg ccgtagcggt ctcatcggga
     1321 tccggaccca gggcgggcag atcgccgaga tcgaccatct gatgctggcc cttaccctga
     1381 tcgcctggct ctttttttat cgacaccggg gcgagatcga gatggaagca ttgcgtgaag
     1441 aggccaggat gatccgggag caatgggctc tgtttttcca agaccaacat cctatcgcgg
     1501 aggcgcaaga cgttaccctg ggcttccggc tggtcgaaga ggccagcatc tgcaacgcga
     1561 tattacagcg gaccgttttt gtatcgaccg gatcgagcag ggtccggttt acccatcgta
     1621 gctggcagga atttctgctt gcgcaatatt tcgtgttgtg cctgcgatgg ggacacgtgg
     1681 agaactttgg tattaccgcc tttaattcgc atatctaccg aatggcgggg gagtctttta
     1741 aggacagcac gatcaccgaa gatcagatcc gcgcggtatt ggcgtcctgg agaaactctc
     1801 acaatacgta cattagtggc aacgttatcg cgtttttggc ctggacccgg accgccatcg
     1861 atccgcgcgc tattcagctt ctgctcaatg aactggcgaa ctttgaagcg ctttcgcgcg
     1921 tggtgctgat cgccggattg ggatatcggg tactggtcaa tgacccgaaa gacccttcgg
     1981 ttggcgatct gaggcggatg ctatttccga agctcggtga attctctaac ccacaaaccg
     2041 cacccgtaga cgatccggtc gcttgcagcc tagcctggtg ctatcgaaag gcctttgccg
     2101 ggatcttcgg gatgcgccag ccggagatcc cttggccggc gatcggcttt gatgaggccg
     2161 aaaccctcaa ggccctaccc atgatctgca cggtctgcga tggagagcgg gtcctggatg
     2221 cgcgttcacg gtcgctgcaa ctcgcgttcc tcgtgcctat attggatgcg tacacagacc
     2281 cgaatctcgc gatccgcgcc ctgcattacc tgtattactt agtggtggcg agaagacatg
     2341 aggtacacgt attcgaactc tcccaggaat taccccagat actcgcctcg ggaggccgat
     2401 tcgaaaagat cattgaatca ttcaccttgg tacccgaggc attagaatta tttagaagat
     2461 gtcaggcagc ccatagcgcg ctcgagtcgg cggtagcgtg accctcccaa gagtgaaatg
     2521 gattggtgac gctatttctc gataaatagc caaactttat aaagcagcgg aatgtagata
     2581 aggcttattt tgttaagtcc aa
//
LOCUS       DASQSL010000201         2935 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_152738, whole genome shotgun sequence.
ACCESSION   DASQSL010000201 DASQSL010000000
VERSION     DASQSL010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2935)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2935)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2935
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152738"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            260..2008
                     /locus_tag="VE844_02010"
     CDS             260..2008
                     /locus_tag="VE844_02010"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4277 domain-containing protein"
                     /protein_id="HZC00165.1"
                     /translation="MNPKITAVHERVDDIPVLVAVLLKLRVAEIIDKHFPTNGNRTGL
                     SLGQMCIVWLTFILSQADHRLNQVEPWVAEHRRTLSRCLGCEVEPRDCTDDRLATGLD
                     YLSVDENWQSFEAELNGAIIRTYDLKTDRVRFDSTSASAYVTPEGMFQFGHSKDHRPD
                     LPQLKISLSVLDAMGLPLTTTVVAGNSADDPLYLPEIAKVRRSIGHNGLTHIGDCKMA
                     ALATRAEIVAHGDYYLCPLSALQMPAAELDRLLEPVFAGQQPLVDVYPLSGDDAAPAP
                     EERMAVGFETTVGLSGQDSSGKTVRWDERRLVLRSLSFAKRQEHSLRNRVKRAQADIV
                     ELTQRKQGKPRLQSVEHAQAAAQQVAEQHRVSEFLSIEVECHVLERSKRAYGARSATT
                     VHEEQITVSATVNEPALEQAVRRLGWRVYASNQGAHELPLAKAVHAYREQYVIEQGFG
                     RLKGFPLSLTPFYLHYEHRIVGLILLLTIALRALVLTQFVARENLKERGQKLSGLYAG
                     QPGRQTDHPTTEMMLRAFRGVTLSCFTIEGETHWCLTPLSDTQKRILNLLGLSTRTFS
                     TLVPAIRKTKFHSCEP"
     gene            complement(2236..>2935)
                     /locus_tag="VE844_02015"
     CDS             complement(2236..>2935)
                     /locus_tag="VE844_02015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00166.1"
                     /translation="TAFLGVSQGLREANLMGKFLGQSYILHEHPATAAAQAGASNPSA
                     ILAAVDAETLKQLSTLYPKIPIFNLTLEDDALRARCLPNVLHVIPSQRMRQEAMAQWR
                     KLYPEAHVTAQAWHPEFEKYAAKQLNRRYRQAQGRPMDDRAWAGWAALKMLADSVARI
                     QNAEPAKLLDYLKTKLAFDGQKGVTMKFRATGQLSQILLIIENGKLVGEAPVKGVVDD
                     PLDLDSLGAVECQK"
BASE COUNT          647 a          812 c          809 g          667 t
ORIGIN      
        1 gcataacgac atcttgttgc tcgagcctga ttcagagttt ttccattatt ttgagagtcc
       61 ccgtgtcgag agcccccgtg ccagtgccag tgatcgaagt catcgatgat acttcgtcct
      121 tatttaatga aaaagtcacc aagcattgaa attgtcatgg agctgctgtc cctgcgcctc
      181 taatccttga gccgggtctt catactcaat attcgcgtga attagatcgc gattttgaga
      241 tttgatataa gcttgcggaa tgaacccaaa aatcacggcg gtacacgaac gagtggatga
      301 tattccggtc ttggtcgcag tgctgcttaa gctacgcgtg gccgaaatca ttgacaagca
      361 cttcccgacc aatggcaatc ggacaggatt gagtcttggc cagatgtgca ttgtctggtt
      421 gacctttatc ctatcgcagg ccgaccaccg gcttaatcag gttgagccct gggtcgctga
      481 gcaccgcagg acgctctcgc gctgtctggg ctgcgaggtt gagccgcgcg attgcacgga
      541 tgatcgcttg gcaaccgggc tcgattatct gagcgtggat gagaattggc agtcgtttga
      601 agccgagctc aacggtgcga tcatacgcac ctacgatttg aagacggacc gcgtgcgatt
      661 cgattcgacc tccgcttcag cctatgtcac cccggagggg atgttccagt ttggtcacag
      721 taaagaccat cgaccggatt taccgcaatt gaaaatatca ttgtccgtgt tggacgcgat
      781 gggactgcca ttgaccacca cggtggtggc gggcaattcg gcggatgatc cgctgtattt
      841 gccggagatt gccaaggttc gccggagtat aggccataac ggcttgacgc acattggcga
      901 ttgcaagatg gcggcgctcg caacccgcgc cgagatcgtg gcgcacggtg attactattt
      961 gtgcccactc tcggcgctcc agatgccggc ggcggaatta gatcggctac tggagcccgt
     1021 ctttgccggc cagcaaccct tggtagatgt ttatccgttg tccggagacg acgctgcgcc
     1081 agcgcccgaa gaacgaatgg cggtcggttt tgaaacgacc gtcggcctca gcggccaaga
     1141 ctcctcgggc aaaacggtca ggtgggacga acgacgtctg gtccttcgca gtttgagctt
     1201 tgccaaacgt caggagcact cgctgcgcaa ccgcgtcaaa cgcgcgcaag cagacattgt
     1261 cgaactcact caacgcaagc aggggaagcc ccgcctgcag agcgtcgaac acgctcaagc
     1321 ggccgctcag caggtcgccg aacagcatcg cgtcagcgag ttcctgagca tcgaagtcga
     1381 gtgccatgtg ctagaacgaa gcaaacgcgc ctacggcgca cgctccgcca ccacggtgca
     1441 tgaagaacag atcaccgtga gcgctacggt taacgagccg gctttggagc aagccgtacg
     1501 tcggctgggt tggcgcgttt acgcaagcaa ccagggcgcc cacgaactgc cgctggcgaa
     1561 agccgtccat gcgtaccgcg aacagtacgt gatcgagcaa ggcttcggac gtctgaaagg
     1621 ctttccgttg tcgctgacgc ccttctattt gcactacgag catcgcatcg tgggcttgat
     1681 cctattgcta acgatcgccc tgcgagcact ggtgctgaca caattcgtgg cgcgggaaaa
     1741 cctcaaagaa cgcggtcaga aactgtctgg cctctatgcc gggcaaccag gccgccagac
     1801 cgaccacccc acgactgaaa tgatgttgcg cgcttttcgc ggcgtgactc tctcctgctt
     1861 tactatagag ggagagactc attggtgtct tacgccactg tccgatacgc aaaagcgtat
     1921 cttgaatctg ctagggctct caacgagaac attctccacg ttggtcccgg caatccgaaa
     1981 aactaaattt cattcatgcg aaccgtgagt gacatattgc tgttcttgaa aatagagccg
     2041 cacgagcttc atcttttcgc aaccggctac attgaacgct aggagtaacg ttacggctgc
     2101 cagcaatccc cggtaaaaca tgagctgttt gattatcata ctatttttac tctaaccctt
     2161 ggtaaatctt ttcagaaata aatgcttacg actcaaatag ttaacccaat tttggatgtt
     2221 gggaattgct ggaacctatt tctgacactc gaccgccccc agactgtcga ggtccagggg
     2281 atcatcaacc acacctttga cgggcgcttc gccaacgagt ttgccattct ctatgatcag
     2341 gaggatctgg ctcagttggc cggtggctcg gaatttcatc gtaacacctt tctgcccatc
     2401 aaaagcgagc ttggttttga gataatcaag cagtttcgcc ggctccgcgt tctggatccg
     2461 ggctacgctg tcagcgagca tcttgagagc ggcccagccg gcccaagccc gatcatccat
     2521 cggccgaccc tgagcctggc gatagcgccg gttaagctgt ttggccgcgt acttttcaaa
     2581 ctcaggatgc caggcctggg ccgtaacatg ggcctcaggg tagagcttgc gccattgtgc
     2641 catcgcctcc tgacgcatgc gctggctcgg aatgacgtgc agtacattgg gcagacaacg
     2701 tgctcttaag gcatcgtctt cgagagtgag attgaagatc gggatcttgg ggtaaagcgt
     2761 gctcaactgc ttgagcgtct cggcatccac cgcggccagg attgctgaag ggttggaggc
     2821 gcccgcttgc gccgctgctg tggccggatg ctcatgcaag atataactct ggcccaggaa
     2881 cttgcccatg agatttgctt ctctcaaccc ttgagagacg cccaggaagg ctgta
//
LOCUS       DASQSL010000202         3068 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_15683, whole genome shotgun sequence.
ACCESSION   DASQSL010000202 DASQSL010000000
VERSION     DASQSL010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3068
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15683"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="VE844_02020"
     CDS             complement(<1..280)
                     /locus_tag="VE844_02020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020563386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HZC00167.1"
                     /translation="MLDNGLKLVVQEDHRAPVAVSQVWYKVGSSYEYDGITGVSHALE
                     HMMFKGTQKRGPGEFSRIIAENGGQENAFTSDDYTAYFQTLERSRLPVS"
     gene            635..1594
                     /gene="ftsY"
                     /locus_tag="VE844_02025"
     CDS             635..1594
                     /gene="ftsY"
                     /locus_tag="VE844_02025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011371359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HZC00168.1"
                     /translation="MFGNRQSEPPKGFFKSLKKGLQRTRERFAGGLARLIQRRPGSDQ
                     DLIEEIETLMLSADMGVEATTRIINNMKSYLSRKELSDPELFYQTLREEMVSVLKPVA
                     RPLVIPKNRTAPFVVLIVGVNGTGKTTTIGKLAYRFRQQGRSVALAAADTFRAAAVEQ
                     LQAWGERNQVPVTAPLPGADPASVVFEAMRSATAQGIEILIVDTAGRLHTQTPLMEQL
                     KKVLRVIAKRDPTAPHETLLVIDATTGQNALSQARQFHAAANITGIVLTKMDGTAKGG
                     IIFALAEQLGISVRFIGVGEQLDDLQAFDAPAFADALLDQDLE"
     gene            1609..2289
                     /gene="ftsE"
                     /locus_tag="VE844_02030"
     CDS             1609..2289
                     /gene="ftsE"
                     /locus_tag="VE844_02030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014706477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HZC00169.1"
                     /translation="MIDFSDVYKVYPGGRGEALKQITLHISRGEMVFVTGHSGAGKTT
                     LLRLIALVEPHSRGQIVVDGHHLDRLKSRQIPYFRRKIGFVFQDHRLLNDRTVFDNVA
                     LPLMIAGYSEYDIHRRVRAALDKVGLLGKERYYPPTLSSGEQQRVGIARAVVNRPPLL
                     LADEPTGNLDPDLSFEIMKLFESFNQVGVTVVIATHDLDLVQALGHRPITLKQGQLAE
                     PTAGDRGH"
     gene            2286..>3068
                     /gene="ftsX"
                     /locus_tag="VE844_02035"
     CDS             2286..>3068
                     /gene="ftsX"
                     /locus_tag="VE844_02035"
                     /inference="COORDINATES: protein motif:HMM:TIGR00439.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="permease-like cell division protein FtsX"
                     /protein_id="HZC00170.1"
                     /translation="MRQLTARSRRTKIGGKLREQLKNWGLLHLQCFFFSLGQLCRTPA
                     ATLVTIAVIGIALALPAGFYQLLDNLLPLNKHWDDAVQISLFLKPKFDERAANKLAGL
                     LRIRKDIAHVKIITKAQALEEYRRLAGFGSALELLNENPLPNIVVVRPTEAAAIPAAS
                     QVLLTQLEKLPEVELAQLDIQWVKRLNALMDLGRQAVGVLAGLLALAVLLVVGNTIRL
                     GIHNHHDAIVIASLFGATRAFIRRPFLHSGCLYGLGGAIMAWI"
BASE COUNT          677 a          858 c          865 g          668 t
ORIGIN      
        1 agctcacggg caaccgggat ctctcaagcg tctgaaaata ggccgtgtaa tcatcactgg
       61 taaaggcatt ctcctggcca ccattctcgg cgatgatccg tgagaactcc ccaggtccgc
      121 gcttttgcgt acctttgaac atcatgtgtt cgagcgcatg ggagaccccc gtgatgccat
      181 cgtactcata gctcgatccg accttgtacc agacctggga taccgcgacc ggcgcgcggt
      241 gatcctcctg aacaacgagc ttaagtccat tgtcgagcat aaattcatgt acgggtggaa
      301 cagccgcctg tacattcaag caataaagca gaagcccacc cagggataat gtatgcagtg
      361 gatttgtcgt catagggtaa agtggctttg tcgattggga aattcgctat atattggcta
      421 gtactccacg atggtaagct gcagagtttg gaccctcatg ccaggtagtc tggggatggg
      481 ggctcaacca tcgtgcctat catttaagat taaacaaacg cagggacgaa cgtgcccctt
      541 cgagatcagg cagcagtaat ggtaggataa ttcactgagt aaagtaagcc cgaattcatt
      601 tgaacaaact cataaagatg taaggtgacc caaggtgttc ggtaatcgac aatctgaacc
      661 tcctaaagga ttcttcaaaa gcctgaaaaa ggggctgcag cgtacccgtg aacgctttgc
      721 cggcgggctt gcccgcctca ttcagcgccg gccagggagc gatcaagacc tgatcgagga
      781 gatcgagacg ctgatgctga gcgcagacat gggcgtagag gcgactaccc ggatcatcaa
      841 caacatgaag agctatctga gtcgcaagga gctgagtgat ccggaactct tttaccagac
      901 cttgagagag gagatggtga gtgtattgaa gcccgtggcc cgtcctttgg tgatccccaa
      961 aaaccgcacg gctccctttg tggtattgat agtcggcgta aacggcaccg gcaagaccac
     1021 cacgatcggc aagctggcct accgttttcg gcaacaaggc cgatcggttg ctttggccgc
     1081 ggcggatacc ttcagggcgg cggccgttga acaactgcag gcgtggggtg agcggaatca
     1141 ggtacccgtc accgcgcctc tgccgggcgc ggatcccgcc tcggtggtct tcgaggccat
     1201 gagatccgct accgcacaag gtattgagat cttgattgtc gacaccgctg gccgcctgca
     1261 tacccagaca ccgctgatgg agcaactcaa gaaagtcttg cgggtcatcg ccaagcgtga
     1321 tcccaccgct ccccatgaga ccctgctggt tatcgatgcc accaccggcc agaatgcctt
     1381 aagccaggcg agacagttcc acgctgccgc gaatatcacc ggtattgtgc tgaccaagat
     1441 ggacgggacg gccaagggtg ggatcatctt tgcgctggcg gagcaattgg ggatctccgt
     1501 gcgctttatt ggggtaggag agcaactcga cgatctccaa gcattcgacg cccctgcctt
     1561 tgccgacgcc ttgcttgatc aagatctcga gtaatgaaga agagcgcgat gatcgacttc
     1621 tcggatgttt ataaggttta tcccggcggg cggggcgagg cgttaaagca gatcacgctc
     1681 cacatctcgc gtggcgagat ggtctttgtc accggccatt cgggggctgg caaaaccacg
     1741 ctgctgcggc tgattgcgct cgttgagccc catagccgcg gtcagatcgt ggtcgacggg
     1801 caccacctcg accgcctcaa atcccgtcag atcccctatt tccggcgcaa gatagggttt
     1861 gttttccagg atcaccgctt gctcaacgat cggacggtgt tcgacaatgt cgccttgccg
     1921 ctcatgattg caggctactc cgagtatgat atccaccggc gcgtacgcgc tgccctcgat
     1981 aaggtagggc ttctcggcaa ggagcgctac tatcctccga ccctctcgag cggtgagcag
     2041 caacgcgtag gtatcgcccg ggcggtcgtt aaccggccgc ccttgctgct cgcggatgaa
     2101 cccactggca atctggaccc ggacttatca tttgagatca tgaagctgtt tgaaagcttc
     2161 aaccaagtcg gggtaacggt cgtgatcgct acccatgatc tggatctcgt gcaggccttg
     2221 ggtcaccgcc cgattacctt gaagcagggc caactggcgg agccgacagc gggagaccgt
     2281 ggccattgag gcagctgact gcccgctcaa ggcgcacaaa gatcgggggc aagctccgcg
     2341 agcagctcaa aaattggggc ctgctccatc tccaatgctt ttttttcagc ctggggcaac
     2401 tctgccgcac gcctgcggct acgctggtca caatcgctgt tatcgggatc gccttggcct
     2461 tgcccgcagg attttatcaa ctcctcgata atctgctgcc gctgaacaag cactgggatg
     2521 acgcagtgca gatatcgctg tttttaaaac cgaaattcga tgaacgggcg gccaataaac
     2581 tcgcgggcct cttacgcatc cgcaaagata tcgctcatgt caagatcatt accaaggctc
     2641 aagccttgga agaataccgc cgattggccg gctttggctc ggccttagag ctactcaacg
     2701 aaaatccttt gcccaacata gtggtggtac gcccaaccga agctgccgct atacctgccg
     2761 ccagtcaagt attgttgacc cagctggaaa aactacccga ggttgagctg gctcagctcg
     2821 atatccagtg ggtgaagcgt ttaaatgcgc tcatggatct gggccgacag gcagtagggg
     2881 tattggcggg cctgctcgcc ttggccgtgc tcttagtagt cggcaatacc attcgactgg
     2941 gtattcataa ccatcacgat gcgatcgtga tcgccagtct ttttggcgct acccgcgcct
     3001 ttattcggcg cccgtttttg cacagcggtt gcctctacgg actggggggg gcgatcatgg
     3061 cctggatc
//
LOCUS       DASQSL010000203         1080 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_110766, whole genome shotgun sequence.
ACCESSION   DASQSL010000203 DASQSL010000000
VERSION     DASQSL010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110766"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..742
                     /locus_tag="VE844_02040"
     CDS             <1..742
                     /locus_tag="VE844_02040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00171.1"
                     /translation="AEVKETVLSRPGRYRPLEHNLLAKEVVIGEGERRRRYIVCFNPH
                     EAERQAKHRTQVIEALKAELARHKGPRATAKWAMELLTSGRYGRYLTVADTGQVRLDP
                     QAIRQAHRLDGKWVLLTNDDTLSIQDAALAYKSLMVIERCFRSLKRGQIYLGPMYHRL
                     PQRIEAHVKICVLALLIQRVVELTVGESWFQLRQCLNSLQATELRTATHQFFQRNEPT
                     QELRDLFKKLDISMPKQVLAIQPLTPEV"
     gene            complement(863..>1080)
                     /locus_tag="VE844_02045"
     CDS             complement(863..>1080)
                     /locus_tag="VE844_02045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011316764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HZC00172.1"
                     /translation="EIAAAHKATPRQVALRFLVRWPSLFTIPKASSPDHTAENAGAGE
                     LRLTETEIARIDEAFPRGPCPRRLPML"
BASE COUNT          225 a          338 c          297 g          220 t
ORIGIN      
        1 ggccgaagtc aaggagacgg tgttaagtcg acccgggcgg tatcgcccgc tcgagcataa
       61 tctcctcgcc aaggaggtgg tcatagggga aggggaacgg cgacggcggt atatcgtctg
      121 cttcaacccg cacgaggccg aacgccaagc caagcaccgc acccaggtca tcgaggctct
      181 caaagccgaa ctggcccgcc ataaaggccc ccgcgctacc gccaagtggg ctatggagtt
      241 gctgacctct ggccgttacg gacgctacct cacggtcgct gacaccggcc aggtgcgtct
      301 ggaccctcag gcgattcgac aggctcaccg tctcgatggc aaatgggtgc tgctcactaa
      361 cgacgacacc ttgagtatcc aagacgccgc cttggcctat aagagtctga tggtgatcga
      421 gcgctgcttt cggtccctca agcggggcca gatctatctc ggtcctatgt accaccgctt
      481 accgcagcgc atcgaagccc atgtgaagat ctgcgtcctg gccctactca tccagcgggt
      541 ggtggagctg actgtcggtg aatcctggtt tcagcttcgg cagtgcctca atagccttca
      601 agccaccgag ctcagaaccg ctacccacca atttttccag cgaaatgaac ccacccaaga
      661 actcagggat ttattcaaaa agcttgatat ttcaatgcct aaacaagtcc tagcgatcca
      721 gccattgact cccgaagtgt aggcacacgc ctttctcgtc ctacctcgct aagtccctgt
      781 ggaaacataa gaatttgctt tgcgtatgct cacccttccg aaacccaggc ttggtgtttc
      841 ctcactacct ttgccgcttc gttcacagca ttggaagcct gcgggggcag gggccacgcg
      901 ggaaggcctc gtctatccgc gcaatctcgg tttcggtcag ccggagttcc cctgcccccg
      961 cgttttcagc cgtatgatcg ggactagaag ccttggggat cgtgaagagc gaaggccacc
     1021 gcaccaggaa ccggagcgcg acctgacgcg gagtcgcctt gtgcgcggcg gcgatttcct
//
LOCUS       DASQSL010000204         1269 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_56659, whole genome shotgun sequence.
ACCESSION   DASQSL010000204 DASQSL010000000
VERSION     DASQSL010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1269
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56659"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..393)
                     /locus_tag="VE844_02050"
     CDS             complement(<1..393)
                     /locus_tag="VE844_02050"
                     /inference="COORDINATES: protein motif:HMM:NF016214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HZC00173.1"
                     /translation="MCSVFTHPVVPAALAAVFPQGSISPTLVLLSAACSVIPDLDVIG
                     FKFGIRYGDMLGHRGLTHSIFFATVLAASLALLLPQSGQGSRLVVFLFLFLSTLSHAI
                     LDAMTDGGLGVAFFAPFHNERYFFPWRPI"
     gene            complement(580..978)
                     /locus_tag="VE844_02055"
     CDS             complement(580..978)
                     /locus_tag="VE844_02055"
                     /inference="COORDINATES: protein motif:HMM:NF025683.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4383 domain-containing protein"
                     /protein_id="HZC00174.1"
                     /translation="MVKRAALIFGWVFLLIGIMGFIPALRMGGGEGYGYLLGLFAVDS
                     LHNWVHILTGAAALAVGYRSEAASRLYFKIFGIVYALVALLGFVYGNSPLLGIMAHNM
                     IDAVFHLLIAATALYLGFAARRQVPQERTA"
     gene            1124..1207
                     /locus_tag="VE844_02060"
                     /pseudo
     CDS             1124..1207
                     /locus_tag="VE844_02060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012213431.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
BASE COUNT          350 a          349 c          340 g          230 t
ORIGIN      
        1 tatcggccgc caagggaaaa agtacctctc gttatgaaaa ggcgcgaaga acgctacccc
       61 cagcccgcca tcagtcatcg catctaggat cgcgtgcgat agcgtagata agaacaggaa
      121 taggaatact acaagacgcg atccttgccc gctctggggt aggaggaggg cgagtgaagc
      181 cgccagcacg gtggcaaaga agatcgaatg ggttaggcca cggtgaccta gcatatcgcc
      241 ataccggatg ccgaacttaa agccaatgac atccaggtcc ggtatgaccg agcaggccgc
      301 actgagcagt accagcgttg gagatatcga cccttggggg aatactgccg caagcgcggc
      361 cggcaccacg ggatgtgtga ataccgagca cataactttc ccctaagacc acaaagcgca
      421 actcttcgga gctggggtgt ctacccaccg cacggactac acagcttgct ggatgatcac
      481 ctcattccgg aactccaaaa tacaggttat agaacgtcac aaaagatgac gccgtagaga
      541 agacgatggc cttctctacg gcaattagaa gagaccggat taggcagttc gttcttgcgg
      601 tacctgccgg cgagctgcaa acccaaggta caaggcagta gccgctatca agagatgaaa
      661 gaccgcatct atcatattat gtgccatgat cccgagcagt ggagaattac cgtacacgaa
      721 tcctagcagg gctacgagtg cgtacactat gccgaagatc ttaaaataaa gccgacttgc
      781 ggcctcgctt ctatagccaa cggccagtgc cgcagcgccc gtcaggatat ggacccagtt
      841 gtgcaaacta tccaccgcaa agagaccgag caaatagcca tagccctcgc cccctcccat
      901 cctaagagcg ggaataaagc ccatgatccc gataagcagg aagacccatc cgaaaataag
      961 tgccgcacgc ttgaccataa ttacacctcc taaggtagat tggatgttaa ctacgtgatg
     1021 tcaggagtat cagcaaatat cacgccatcg tgcacaccgc cagtctggac gctcggtcta
     1081 gcaaagctga tgatggagta tctggcaccc agggccctac cacacccggc gcatgatgga
     1141 agagatccta gcggtggagg aggagcacgc tgatgatctg gtcaatctcc tgcaggggct
     1201 gggctgagcg gggcggcaaa atttacatgg ccatcagcaa ttcttactaa gccgcctctg
     1261 ctgaggggc
//
LOCUS       DASQSL010000205         5881 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_15738, whole genome shotgun sequence.
ACCESSION   DASQSL010000205 DASQSL010000000
VERSION     DASQSL010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 5881)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5881)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5881
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15738"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..455
                     /locus_tag="VE844_02065"
                     /pseudo
     CDS             1..455
                     /locus_tag="VE844_02065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012408472.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
     gene            452..1234
                     /locus_tag="VE844_02070"
     CDS             452..1234
                     /locus_tag="VE844_02070"
                     /EC_number="1.1.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006937949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003858 - 3-hydroxybutyrate dehydrogenase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyrate dehydrogenase"
                     /protein_id="HZC00175.1"
                     /translation="MIKGKVAIITGSTSGIGLGIVHGLAQAGANIVLNGFGDPTEIER
                     IRTEIEAASGSRVVYNGADMSKPAEIVALITETHERFGSVDIVVNNAGIQKVAPIEEF
                     PVDKWDAIIAINLSSAFHTIRTAVPLMKAKGWGRIVNIASAHALVASPFKSAYVAAKH
                     GLLGLTKTVALEVAEQGITCNAICPGYVWTPLVAGQVKDTAQARGITEEEVIRDVLLG
                     EQPTKRFVTVEELAALTVFLCSEGAASITGIALPVDGGWTAH"
     gene            1553..2149
                     /locus_tag="VE844_02075"
     CDS             1553..2149
                     /locus_tag="VE844_02075"
                     /inference="COORDINATES: protein motif:HMM:NF024969.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HZC00176.1"
                     /translation="MGDAGAETEITLVEPMRVAAQLFTEAAADVELHAVLQAIVKITA
                     ERLRSGGTLFTCGNGGSAAQATHVAGELVGPFYNRHRRPLRAIPLGFDPSSLTAIAND
                     FNYESAFARQLEALGRAGDMLWAFSTSGNSENVLAALEKAKALAIYTVLFSNHDGGKA
                     RKLADHFLYTPPALTPRVQELHLLYAHALCEAIEKQLA"
     gene            2217..3017
                     /gene="trpC"
                     /locus_tag="VE844_02080"
     CDS             2217..3017
                     /gene="trpC"
                     /locus_tag="VE844_02080"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017366234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HZC00177.1"
                     /translation="MPKPPDILQDILAHKAEEVEARKAVLALDKIKRRALEAPPPRNF
                     ARAIEQRIAQGKLAVIAELKRISPSRGVIRGDYQPAAIARAYERAGATCLSVLTDERY
                     FQGADAHLIEARAVSTLPVLRKDFIVDPYQVYEARAIGADCILLIVAGLSDVRLCELA
                     GLAGELGMDVLVEVHNREELERGLMLRLPLIGINNRDLHTFKTDIQTTLHLLLDMMHD
                     RTVVTESGIHTAEEVALLRRHGVSAFLVGEAFMIAADPGERLKELFGG"
     gene            3110..4138
                     /gene="recA"
                     /locus_tag="VE844_02085"
     CDS             3110..4138
                     /gene="recA"
                     /locus_tag="VE844_02085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018231023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HZC00178.1"
                     /translation="MDENRRKALGIALSQIEKQFGKGSVMRMGDVEAVRDVETVSSGS
                     LGLDIALGVGGLPRGRVVEIYGPESSGKTTLALHAVAEVQKLGGAAAFIDAEHALDPQ
                     YAAKLGVDVGDLLLSQPDTGEQALEITDMLVRSGAVDVMVVDSVAALTPKAEIEGEMG
                     DTHVGLHARLMSQALRKLTANIARSNALVIFINQIRMKIGVMFGNPETTTGGNALKFY
                     ASVRLDIRRKGAIKRDEEVVGNETHVKVVKNKVAPPFKEVNFDILYGEGISREGEIID
                     LGVEEDIIEKSGVWYSYKGERIGQGKDNTRNYLKEHPEKTAEIERAIREKLLPKVPEK
                     RLAEEFEV"
     gene            4147..4587
                     /locus_tag="VE844_02090"
     CDS             4147..4587
                     /locus_tag="VE844_02090"
                     /inference="COORDINATES: protein motif:HMM:NF014668.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein RecX"
                     /protein_id="HZC00179.1"
                     /translation="MLKARRYAVELLARREHTCLELTRKLSARGIGEGIIHQVLKALA
                     TEGLQSDARCAESYVRERTQKGYGPLRIREALRMRGVEGELINHYIDNGAPEWDTHSA
                     RVRAKRFGSRVPEDRRERLRQARFLQYRGFTHDQIRRLIRIEDG"
     gene            4580..>5881
                     /gene="alaS"
                     /locus_tag="VE844_02095"
     CDS             4580..>5881
                     /gene="alaS"
                     /locus_tag="VE844_02095"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006473669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HZC00180.1"
                     /translation="MDKRTAKSTAEIRRAFLDYFQARGHTVVPSSPLVPIHDPTLLFT
                     NAGMVQFKEVFVGREQRPYKRAASCQACVRAGGKHNDLENVGYTARHHTFFEMLGNFS
                     FGDYFKREAICYAWEFLTEILEIPKERLWVTVFHEDHEAETLWLEEIGIDPARFSRCG
                     EESNFWAMGTTGPCGPSTEIFYDHGPAIAGGPPGSPEQHGDRYVEIWNLVFTQYDRDD
                     EGRLHRLPKPSVDTGMGLERIAAVMQGVHSNYAIDLFQVLTAAICTMLGRAPEARDKA
                     SLDVIADHIRSCAFIAAEGVVPSNEGRGYVLRRIIRRAIRHGHKLGIEGPFFYRLVEA
                     LGQAMGSAYSQFLDVKSTVAGVLRQEEERFAETLEQGLKLLDRSLAELRGTVIPGKDI
                     FQLYDTYGFPVELTADIARERELTLDMEGFEREMTAQRERAR"
BASE COUNT         1283 a         1512 c         1834 g         1252 t
ORIGIN      
        1 atccgacggg gtgtggtgcc agaactctcc tgctctgccg ggaagatcat ctgcctgtct
       61 tcagtgcatc atctgatccc tgggggaggc caaaccagtt atgccgcctc taaaggtggg
      121 gtgcatatgc tggtcagggt catggcccag gaactcgctg cgcacaagat ccgggtgaac
      181 ggctctcacc cggcgtgatc aagaccacct ccaatcacgc ggcttgggct aggcccgagg
      241 aagaagcaga gctcctggaa ctgatcccct atggccgttt ggggcaggct ggcgatatcg
      301 cccaggccgc cgtctggctg gcctcggatg cctcggatta catgaccggg acgacgcttt
      361 atgtagacgg gggtatgcgc ttatatccct cttcggaggt gggatctaaa ctaacagaac
      421 gtcttccatt aacttctgag gagaaacttc catgatcaaa ggtaaagtcg caatcattac
      481 gggttcaacc agtgggatcg ggttggggat tgtccatggt ttggcgcaag ccggcgccaa
      541 catcgtgctc aatggctttg gggatcccac cgagattgaa aggatccgca ctgaaatcga
      601 ggcagcctca ggcagccggg tagtctacaa cggcgccgat atgagcaaac cggccgagat
      661 cgtcgccctg atcacagaga cccacgagcg gtttggatca gtcgatatcg tagtcaacaa
      721 cgcgggtatt caaaaggtcg cccctatcga ggaattcccc gtcgataaat gggatgcgat
      781 catcgccatc aacctctctt ccgccttcca caccatccgt actgctgtcc ctttgatgaa
      841 ggccaaaggc tggggtcgga tcgtcaatat cgcctcggcc catgccctgg ttgcctcgcc
      901 gtttaaatcg gcctatgtgg cagctaagca cggactgctg ggactcacca aaacggtggc
      961 gctcgaggtt gccgaacagg gcatcacctg caatgccatt tgtccggggt atgtgtggac
     1021 ccctttagtg gcaggccagg tcaaggatac cgctcaagcg cgcggcatta ccgaggaaga
     1081 agtgatccgc gatgtcttgc tcggcgagca gccgaccaaa cggtttgtga ccgtcgagga
     1141 actcgccgcg ctcaccgtat ttttgtgcag tgaaggcgcg gcctcgatta caggtatcgc
     1201 tttacctgtg gatggcggtt ggacagctca ctgacctaga ccgggagtat tttattgtcc
     1261 ttatgaatcc gatcccgagg cgatccgcgc ggcggcgccg gagcctttta cacctatact
     1321 catggagcac ggtagggtgg gtgagcgcgc gaagcccaac gcacgggtgc tgagcaacgc
     1381 ggcgctttct gtgttgagac cttaagttgc acccggacag ggttccagcc cccagtgcac
     1441 cgcgtatact tgtgaatata tgtgcattgc cttacgatgc agggtacaag catggcccag
     1501 gtaaggaaag acaggggtga agcgtgaggg gtgaggtggt tgaggatata atatgggaga
     1561 tgctggagct gaaacagaga tcacgctagt agaaccgatg cgggttgctg cccagctctt
     1621 tactgaggct gcggctgacg ttgagctgca cgctgtcttg caggcaattg taaagatcac
     1681 ggcggagagg ttgcgcagtg gaggtaccct ttttacctgt ggtaacggcg gcagcgccgc
     1741 acaggcgacc catgtcgcgg gggagctggt gggccccttt tataatcgcc accgccggcc
     1801 gctgagggca attccattgg gattcgaccc cagttccctc accgctatcg ccaacgattt
     1861 caattatgaa tcagcgtttg cgcggcaatt ggaggcgctg ggtagagcgg gtgatatgct
     1921 ttgggcattt tctaccagcg gtaattcgga gaatgtgctg gcagcgctcg aaaaggctaa
     1981 ggcattggct atttacacag tccttttttc aaatcacgac ggcggtaagg cgcgcaagct
     2041 ggcagatcac ttcctttata caccgccagc cttgaccccg cgggttcagg agctgcactt
     2101 gctctatgcc catgcacttt gtgaagccat tgaaaagcag ctggcttagg agagctatcc
     2161 tacaggttaa tagttcatat agagagaccc ctagagagac ccctgaggaa atataaatgc
     2221 ccaagcctcc tgatatcctc caggacatcc tcgctcataa agcagaagaa gttgaagctc
     2281 gcaaggctgt gcttgctctt gataagatca agcgacgcgc cttggaggcg ccgccgcccc
     2341 ggaatttcgc cagggctata gagcagcgga tcgcgcaggg gaagcttgcg gtgatcgccg
     2401 aattgaaacg gatctcgcca agccgaggcg tgatccgggg cgactatcaa ccggcggcta
     2461 tcgcgcgcgc ttatgaaaga gcgggggcta cgtgcttatc ggtgcttacc gacgagagat
     2521 acttccaagg ggccgatgcg catctcatcg aggcgcgtgc ggtctctacc ttgccggtgt
     2581 tgcgcaagga ttttatcgtt gatccctatc aggtctatga ggcccgggcc ataggcgccg
     2641 attgtatcct cctgatcgtc gcgggcttga gtgatgtgag actttgtgaa ttggcggggt
     2701 tggcggggga actcggaatg gatgtgctgg ttgaggtcca taaccgggaa gagcttgagc
     2761 ggggtttgat gttgcgcctg ccgctgattg ggatcaataa ccgcgatctg cataccttca
     2821 agaccgatat ccaaaccact ctccacctcc tgctcgatat gatgcatgac cgcacggtgg
     2881 tgacagagag cggaatacat accgccgagg aggtggcgct cctacgccgt catggggtca
     2941 gtgcctttct ggtgggggaa gccttcatga ttgctgctga tcccggtgag agactcaaag
     3001 agttgtttgg cggctgaatt cctggcaacc gcataagtgg ggtgtcttaa ggtaataatt
     3061 tatcattttg gcgagtataa taagtttgtt tgaagggggc atgaagcgga tggacgagaa
     3121 caggagaaaa gcgctaggca tagccctgag ccagattgaa aaacagtttg gcaaggggtc
     3181 ggttatgcgc atgggggatg ttgaggcggt gagagacgta gagacggtgt cctcgggttc
     3241 actgggtctt gatattgcct tgggtgtggg cgggctgccg cgcggcaggg tcgtcgagat
     3301 ctacggcccg gaatcctcgg gtaagaccac gcttgccttg catgcggtcg ccgaggtgca
     3361 gaagttagga ggtgcagcgg cttttatcga tgccgaacat gcgcttgatc cgcagtatgc
     3421 cgcaaagctt ggggtcgacg tcggtgatct cctgctctca caacccgata ctggcgagca
     3481 ggcccttgag atcacggata tgctggtgcg atccggggcg gttgatgtga tggttgtcga
     3541 ttcagtcgcg gccttgacgc ccaaagcaga gatcgagggg gagatggggg atacccatgt
     3601 gggcttgcat gcgcggctga tgtcccaggc cctgcgcaag ctcacggcta acatcgcgcg
     3661 ctccaatgcc ctggtgatct ttatcaatca gatccgcatg aagatcgggg tcatgtttgg
     3721 caacccggag actacgaccg gcggtaatgc cctcaaattc tatgcctcgg tccggctcga
     3781 tatccggcgc aagggtgcga tcaagcgcga tgaggaggtc gtgggtaacg agacccacgt
     3841 aaaggtggtg aagaataagg ttgccccgcc ctttaaagaa gtgaattttg atatcctgta
     3901 tggggaaggc atctcgcggg agggggagat cattgatctg ggggtagaag aggacatcat
     3961 tgaaaagtcc ggcgtctggt atagctataa gggagagcgg atcggccaag gtaaggataa
     4021 tacccggaat tatctcaagg aacaccctga aaagacagcc gagatcgagc gtgcgatccg
     4081 ggaaaagctg ctgcccaaag ttccggagaa acgcttggcc gaggagtttg aggtctgagc
     4141 gatgagattc taaaggctcg ccgctatgca gttgaattat tagcacgacg cgagcatact
     4201 tgcctcgagc ttacacgtaa gctctctgcc cgcggaatag gtgaggggat catccatcag
     4261 gtacttaaag cgctggccac ggagggactc cagagcgacg cacgatgcgc ggaaagctat
     4321 gtacgcgagc ggactcagaa gggctatggc ccattgagga tcagagaggc actcaggatg
     4381 cggggtgtag agggggaact gatcaatcac tatattgaca acggtgcgcc cgagtgggac
     4441 acccatagtg cccgggtgcg ggcaaagcgc ttcggcagcc gagtgcccga agatcgccgt
     4501 gagcgcttgc ggcaagcgcg gttcttgcaa taccgtggct ttactcacga tcagatcagg
     4561 cggctgatac ggattgaaga tggataaaag gacagcaaag agcactgcag agatacgccg
     4621 cgcctttctc gattactttc aagcacgggg ccataccgtt gtccccagca gtcctctggt
     4681 gcccatccac gatccgacct tattattcac caatgcgggc atggtgcagt tcaaagaggt
     4741 ctttgtcggg cgagaacagc gtccttacaa acgggcggcc tcgtgccagg cctgcgtgcg
     4801 ggcgggcggt aagcataacg atctcgaaaa cgtcggttac accgcacgtc atcacacctt
     4861 tttcgagatg ctgggcaact tcagtttcgg cgactatttc aagcgcgaag cgatctgcta
     4921 tgcctgggaa tttctgacag agattcttga aattcctaaa gaaaggctct gggtaaccgt
     4981 gttccatgag gatcatgaag ccgagaccct gtggcttgag gagatcggca tcgatcccgc
     5041 ccgcttctcg cgttgcggcg aagaatcgaa cttctgggcc atggggacca caggaccctg
     5101 cggcccctcg accgagatct tctacgacca tggccccgcg atcgcgggtg gtcccccagg
     5161 gagccccgag cagcacggtg atcgctatgt cgagatctgg aatctggtgt tcacccagta
     5221 cgacagggat gacgaaggga gactgcaccg cctgccgaag ccttcggtcg acaccggtat
     5281 ggggcttgaa cgtatcgcgg cggtgatgca gggggtgcac agcaattacg cgatcgatct
     5341 atttcaggtc ttgacggcgg ccatctgcac gatgctaggt cgtgccccag aagcgagaga
     5401 taaggcatcc cttgatgtga ttgctgatca tatccgctcc tgcgccttta tcgccgccga
     5461 aggggtggtt ccttccaacg aagggcgcgg gtatgtattg cgccggatca tacgccgggc
     5521 catccgtcat ggtcacaagc tggggatcga ggggccgttt ttttaccggc tggtggaggc
     5581 gctcgggcag gcgatgggga gcgcctattc ccagttcctg gacgtcaaaa gcaccgtcgc
     5641 aggggtgctg aggcaggaag aagaacgctt tgccgagacg ctcgagcagg ggctgaagct
     5701 gctcgatcga tccctcgctg agcttagggg cacggtgatc ccgggtaaag atatatttca
     5761 actctatgat acctatggtt tccccgtcga gctgaccgca gacatcgccc gggagcgtga
     5821 actgacgctg gatatggaag gtttcgagcg ggagatgacg gctcaacgtg agcgcgctcg
     5881 g
//
LOCUS       DASQSL010000206         1782 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_28303, whole genome shotgun sequence.
ACCESSION   DASQSL010000206 DASQSL010000000
VERSION     DASQSL010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1782
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28303"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..247)
                     /locus_tag="VE844_02100"
     CDS             complement(<1..247)
                     /locus_tag="VE844_02100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00181.1"
                     /translation="MKIGSTETKAIFDAAVLVLRDKAVAGRFGRPPATQKTWPLGGAL
                     DENGSLLIQGIGKVLIQGMMPSATLMPISQNKFDVMQR"
     gene            complement(244..1410)
                     /locus_tag="VE844_02105"
     CDS             complement(244..1410)
                     /locus_tag="VE844_02105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00182.1"
                     /translation="MLDDTFKLTDEKVLRHARELLEEHLPLEAEGYTCTTEDLLNVLL
                     GVAANRGTIESVCADLVGTPDAETIRTYFNEQLRVEDLPDLAKRVNAALAAEIPERVR
                     RRACEIALDLHDRPYYGKLSQDEGLWVRGRAKDGTTRFYRIATAYVMVKHVRVTVAVR
                     FVLPGEDIVTVLDDLLTRLRRLGIRVKRLFLDRGFDGVAVMEYLTRRKQPALIACTIR
                     GKRGGTRALCRGHCSYRTRYTFHGENSSSFTAELAVCRVFTTAKRTGRQPCRADWMIF
                     ILIHLDWTPPQARCQYRRRFGIESSYRCAGQVRGWTTSPNPAYRFLLIALSFVLLNVW
                     VHLRWLFTQVPRRGRRWLNVKLFQLTRLVKFIIRTLERHYGCVHQIIALAAPRL"
BASE COUNT          397 a          516 c          470 g          399 t
ORIGIN      
        1 tgcgctgcat tacgtcgaac ttgttttgtg atatcggcat taacgtggcg gatggcatca
       61 tgccctggat caacaccttg cctattccct ggatcaacag agaaccgttt tcgtccagag
      121 ctccgcccaa cggccacgtc ttttgagttg caggcgggcg gccgaaacga cctgctactg
      181 ccttatctcg caacaccagc accgctgcgt caaaaattgc tttagtctca gtagatccaa
      241 ttttcatagt cgtggagccg ctagtgcaat gatctgatga acgcagccgt aatgccgttc
      301 caatgtgcgg atgatgaatt tgaccagccg agtgagttgg aagagcttga cattcaacca
      361 gcgacgccct cggcgcggga cttgtgtaaa tagccaacgc agatgcaccc agacattgag
      421 caagacgaag ctcaaggcga tcaacagaaa gcgataggca gggttcggtg aggtagtcca
      481 gccgcggacc tgccccgcac agcgatagct gctctcgatg ccgaagcgac gccggtattg
      541 acatcgtgct tggggtggcg tccagtccag atggatcagg atgaagatca tccagtcggc
      601 cctgcatggc tggcgtccag tgcgcttggc cgtggtgaat acccgacaga cggccagttc
      661 ggcggtgaac gatgagctgt tttcaccgtg gaaggtgtag cgggtgcggt aactgcagtg
      721 gccccggcac agggcacgcg tcccacccct cttcccacgg atggtgcagg caatcagggc
      781 tggctgtttc cgacgcgtca gatattccat gaccgcgacc ccgtcgaagc cgcgatccaa
      841 gaacagccgt ttcactcgga ttcccagcct tctcaggcgc gtgagcaagt catcgagaac
      901 agtgacgatg tcctcgcccg gcagcacgaa acgcactgcc accgtgaccc gcacgtgctt
      961 taccatcaca taggccgtgg cgatccggta gaagcgcgtg gtgccgtctt tggcccggcc
     1021 gcgcacccac aggccttcgt cttgcgacag cttgccgtag taaggccggt catgcagatc
     1081 aagggcgatc tcgcaggcac ggcgccgtac gcgctccgga atctcggccg ccagtgcggc
     1141 gttcacacgc ttcgccaggt caggcaagtc ttccacgcgt agttgctcgt tgaagtaggt
     1201 acggatcgtt tcggcatcag gcgtgcccac caggtcggcg cagaccgact caatggtgcc
     1261 ccggttagcc gccaccccta gcaggacgtt cagcaagtcc tcggtcgtgc aagtataacc
     1321 ctcggcttct aggggcagat gttcttccaa caattcgcgt gcgtgcctca gcactttctc
     1381 atccgtcagt ttgaacgtat catccagcat gggcttgtcc tccagggatt tgtggtatct
     1441 cgtacctaca atctgattcg gttggggcaa gcccgttgcc ttttcacgtc attaaagaca
     1501 taaatttgga tctactgaga ctattaatag tttcttattc atctttctaa agttactaaa
     1561 aacgacttag cgcccaatag taatcaaccg gacgaatctg tccagacatt ctttattcgt
     1621 ccagacgcct ctagcagcgg tacgccattg gacacactct tctgtccaca atttaccaaa
     1681 ccagatatta aggcttgtgc agttccaaaa accctcgttt ttgatacaca tcgctgacac
     1741 cgttcaaaaa tagcaggtct aagcaaagca cctgtatcaa aa
//
LOCUS       DASQSL010000207         1509 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_152832, whole genome shotgun sequence.
ACCESSION   DASQSL010000207 DASQSL010000000
VERSION     DASQSL010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152832"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..844
                     /locus_tag="VE844_02110"
     CDS             <1..844
                     /locus_tag="VE844_02110"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014890521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HZC00183.1"
                     /translation="HNNVHGANSMRYFTARRITAAPILLLLLGLLPAHALDLDDYRLV
                     DLTHPFNKDTIYWPTAPSHFELKPLAHGYTEGGYFYVANAFCAPEHGGTHIDAPIHFG
                     HGKQTLEAIPLAQLAAPAVVIDMTHKAQADRDHRLTRADMLEFEGHHGRIEPGTIVLL
                     RTGWSQYWPHRKRYLGDDRPGDASHLSFPSYGEEAARLLVEERKVAALGVDAASIDYG
                     RSKDFKVHRIAAAGNVPGLENLTRLEELPARGATVIALPMKIEGGSGGPVRVIALVPK
                     AGSK"
     gene            complement(1077..1304)
                     /locus_tag="VE844_02115"
     CDS             complement(1077..1304)
                     /locus_tag="VE844_02115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013033930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HZC00184.1"
                     /translation="MTTIIREVYEALKEAGASEEKAAAAAQAIQAVREEEHLRRIEER
                     LTRVEERLTLLQWMIGFNLALSTAGLVRLLV"
BASE COUNT          326 a          483 c          386 g          314 t
ORIGIN      
        1 tcataacaac gttcatggag ccaattcgat gagatatttc acagcccgca ggataacagc
       61 cgcgccgatt ctcctactgc tgttaggctt attgcccgca cacgcgctgg acctcgatga
      121 ctaccggctg gtcgatctca cccacccctt caataaggac acgatctact ggccaaccgc
      181 tccctcccac tttgagctca aacccttggc gcacggctac accgagggcg gctatttcta
      241 tgtggccaat gcattctgcg ctcccgagca cggcggtacc catatcgatg cgcctatcca
      301 cttcggccac gggaaacaaa ccttggaggc gatcccgctc gcccagctcg cggctccggc
      361 tgtggtcatc gatatgacac acaaggccca agccgatcgg gatcatcgcc tcacgcgcgc
      421 ggatatgctt gaatttgagg gccatcatgg gaggatcgaa ccgggcacca tcgtgctgct
      481 gcgcacggga tggagccaat attggcctca ccgcaaacgc tatctgggag atgaccggcc
      541 cggcgacgcc tcgcatttga gcttcccaag ctacggggaa gaggccgccc ggctactcgt
      601 tgaagaacgc aaggtagcgg ctttaggggt cgatgccgcc tcgatcgatt atggccgctc
      661 gaaggatttt aaggtccacc gaatcgccgc cgcgggaaat gtgccgggcc tcgaaaacct
      721 cacccgtttg gaagagctgc ccgcacgcgg ggcgaccgtg atcgccttgc ccatgaagat
      781 cgagggcggc tccggcggac cggtccgggt tattgcatta gtgcctaagg caggttcaaa
      841 gtgatacggc taccccctga tcccgatcgc cttatctcat cgccgatgct aatgacctcg
      901 gcgcttggtc tcttcgttct attcgcagat aagttcaaga cccccctatc ttaaaaagct
      961 ctcagtagcc atgcccgatc ccaccgaaga gccagaaaca cgcccacata ccccttcccc
     1021 cctgatggaa gaagtcaact ctgtaggctt gctaccttca gaactgccat gacggatcaa
     1081 accaacagcc tcaccagccc ggcggtagag agtgccaggt tgaagccgat catccattgg
     1141 agcagggtca accgttcttc aactctggtc agccgctctt caatccggcg caagtgttcc
     1201 tcctcgcgca ctgcctggat ggcctgagca gcggcagccg ccttctcctc gcttgccccc
     1261 gcttccttta gagcctcata gacctcgcgg attatcgtgg tcataccgaa aaggtcaaac
     1321 cttagcaagt agttttgcca tagtccaatt atacattagc gagcccgtag cccggatgga
     1381 gtgaaacgaa atccgggata aacaaacact gctctgcctg atgatgtccc cgggtttcgc
     1441 tgcgctgcat ccgggctact ttgctaccca gctgcgccac cgctcatcgc aatggcaaat
     1501 aacgtattt
//
LOCUS       DASQSL010000208         1429 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_152835, whole genome shotgun sequence.
ACCESSION   DASQSL010000208 DASQSL010000000
VERSION     DASQSL010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1429)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1429
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152835"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            370..1233
                     /locus_tag="VE844_02120"
     CDS             370..1233
                     /locus_tag="VE844_02120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011342088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+)/NADH kinase"
                     /protein_id="HZC00185.1"
                     /translation="MNKIGIIAKPRPDAKPLLEDLVKWLEARGVEAVLDFDTGAILGG
                     VSTYNTRMKSVVPESVDLIVVLGGDGTLLSVARLVEGRDVPILGVNLGSLGFLTEVTV
                     AELFPVLEEVLAGHFTVSERVRLHCQVHRQGERITQAVVLNDVVINKGALARIIEMET
                     YVDGIYVNTFRADGLIISTPTGSTAYSLAAGGPILYPSLEALIINPICPFTLTNRPLV
                     IPDSVKIEVVLIKENEDVLVTLDGQVGVALRYRDVIEIQKSETRLRLIECPGKNYFEI
                     LRTKLKWGDAP"
BASE COUNT          295 a          409 c          444 g          281 t
ORIGIN      
        1 cacccggacc ctcccccatc cagggggagg gcaggcgctg tgtgcccagg ctggcaaaat
       61 acctacccct gtcagcctag tgggggaagg tgaggatggg agaagagacc gatgtcgccc
      121 gccaacgtct atgtaaatgc agaccgctct ggcacggcag tcgatagttt cgccgccacg
      181 tcgtctaaga atagagtgtg gcgctaggga atggaaggga aattcaagat gctctagccg
      241 gccatccaaa ttcccgcttg cccggcgaaa gaccggtatg atacgatttc acatgcgtaa
      301 cacgatggcg agacgctccg cacccggtgc aacggcgcgg gcgcctgggt cgaccgtgag
      361 ggggagagcg tgaacaagat tgggattatc gcgaaaccac gaccggatgc aaagccgcta
      421 ctggaagacc tggtcaaatg gctggaggcc cgtggcgttg aagcggtgct ggatttcgat
      481 actggcgcga tcctcggggg ggtatctacc tataatacgc gcatgaagag cgtcgtaccg
      541 gaatcggtcg atctgatcgt ggtgctcggc ggcgatggta cgctcctcag cgtcgcacgc
      601 ttggtcgagg ggagggatgt gcccatcctg ggggtcaacc tcggcagcct gggttttctc
      661 accgaggtca cggtcgcaga actgttcccc gtcctggagg aggtgctggc cggtcacttc
      721 accgtcagcg agcgtgtgag gttgcattgc caggtgcacc ggcaagggga gcgcattacc
      781 caggcggtgg tgctcaacga cgtggtgatc aacaaaggcg cgctggcgcg cattatcgag
      841 atggaaacct atgtcgacgg catctacgtc aacaccttcc gggctgacgg gctgattatt
      901 tccacgccga cgggctcaac ggcttactcc ctcgcggccg gcggcccaat cctctacccc
      961 agtctggagg ccctcatcat caaccccatc tgtcccttca ccctgaccaa ccgcccgctg
     1021 gtgattcccg attcggtgaa gatcgaagtg gtcctgatca aggaaaatga ggacgtccta
     1081 gtcacgctcg atgggcaggt cggcgtggct ctgcgctatc gcgatgtgat cgagattcag
     1141 aaatccgaga cgcgcttgcg attgatcgaa tgcccgggca agaattactt tgagatcctg
     1201 cgcacgaaat tgaaatgggg cgacgcgcca tagcgatcgt cctgtataag gcttccggcc
     1261 acactcctca atgatccgtg agggtcatga ggtacccgtt tcctctcgca tcctaacctt
     1321 cccccaccag gggggaggag ggccagccgt gctcaaggaa ctgcggatta agaacttcgc
     1381 catcatcgat gagttgcacg tgcacttcgg ccgtgggctt cacgtgttc
//
LOCUS       DASQSL010000209         1236 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_15761, whole genome shotgun sequence.
ACCESSION   DASQSL010000209 DASQSL010000000
VERSION     DASQSL010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1236
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15761"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(63..476)
                     /locus_tag="VE844_02125"
     CDS             complement(63..476)
                     /locus_tag="VE844_02125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00186.1"
                     /translation="MAYTSGSRPTCPHARTFIQIAEQTIFSKITEHTRPDQFTAATDI
                     LTQLCQRLEAQVDMFHYPAATGDHWCVRDVYDHAVLALAGFAAMHEQAVPEPPKQQLI
                     SRKGVVIDLEDTIQTSTDDTELGSEGTPPERRTNR"
     gene            complement(515..958)
                     /locus_tag="VE844_02130"
     CDS             complement(515..958)
                     /locus_tag="VE844_02130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00187.1"
                     /translation="MLDDWLERLTREPPEQRARRQLRDVRNATRDTVKELKKHPNDRL
                     TGDILHNHKVRVAEIQRRGIQPPPARCNVCGKRLPKPIGNPWTNNPAFGLLWAILLAV
                     LVPILLPLIGWWALVVFPAGWLLSQTFVWSIPLPFLILLVLSFFL"
     gene            complement(968..>1236)
                     /locus_tag="VE844_02135"
     CDS             complement(968..>1236)
                     /locus_tag="VE844_02135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00188.1"
                     /translation="GRVTVMTIVEQSTLYGQVEKLMAQVNHSEEFQRRFLSRTANAIH
                     NYEAGADTIQRRAISEIIANRPPEVVTRIIAVPPKGILPRLFGK"
BASE COUNT          234 a          351 c          378 g          273 t
ORIGIN      
        1 gcctcgggag agggcgctcc gcttcggttg cttcacgcct gattgggaag cgagttgcag
       61 cgtcacctgt tcgttctccg ttcaggtggt gtgccttcac tccccagttc tgtgtcatcg
      121 gtgctggtct gaatcgtgtc ctccagatca atgaccacgc ctttccggga aatcagctgc
      181 tgtttcggtg gctccggcac tgcctgctcg tgcatagcgg caaacccggc aagggccagg
      241 accgcatggt catagacatc ccgcacacac cagtggtcac ctgttgccgc cgggtagtgg
      301 aacatgtcca cctgtgcctc cagccgctga cataattggg taaggatgtc agtcgcggcg
      361 gtgaactggt cagggcgcgt gtgctcggtg attttgctaa agatggtctg ctccgcaatc
      421 tggataaagg tccgcgcatg cggacaggtc ggccgggatc ctgacgtgta tgccatagcc
      481 ttgttcctcc tttttacgaa cgattacggg tcagtcacag aaaaaagctg agcaccaaca
      541 ggatgaggaa gggcagcgga attgaccaca caaaggtctg ggacaggagc cagccggcgg
      601 gaaagacgac gagcgcccac cagccaataa gcggcaggag gatggggacg aggacggcaa
      661 gcagtattgc ccagagcagg ccaaaggcag gattgttcgt ccacggattc ccgatcggct
      721 tgggtaagcg tttgccgcac acgttacagc gcgcaggcgg tggttgaata ccccggcgct
      781 gaatctctgc aacccgtact ttatggttgt ggagaatatc gccggtcagg cggtcattgg
      841 gatgtttctt gagctccttg accgtgtcgc gcgttgcgtt tctcacatcc cgcagctgcc
      901 gtctggcacg ctgctccggc ggttcgcggg tcaggcgttc cagccagtca tcaagcatgg
      961 ggtgtcccta cttgccaaac agccggggca ggatgccttt tgggggcacg gcaataatcc
     1021 gggtcaccac ctctggcggc cggttggcga tgatctcact aatcgcacgg cgctgaatgg
     1081 tatctgcccc ggcctcgtaa ttgtgtatgg cgtttgctgt gcgggacaag aaccgccgct
     1141 ggaactcctc agagtggttc acctgtgcca tgagtttttc cacttgcccg tacagtgtgc
     1201 tctgctccac aatggtcatc accgttaccc tgccga
//
LOCUS       DASQSL010000210         1310 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_15784, whole genome shotgun sequence.
ACCESSION   DASQSL010000210 DASQSL010000000
VERSION     DASQSL010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1310
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15784"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..653
                     /locus_tag="VE844_02140"
     CDS             <1..653
                     /locus_tag="VE844_02140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011617356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HZC00189.1"
                     /translation="YGFHGLSYEYIASILPRYLRDAAQGRIIVAHLGNGASLCALKAG
                     KSIASTMGFTALDGLPMGTRCGALDPGVVLYLLTERGMDPNAITDVLYNRSGLLGVSG
                     VSHDMRMLLSSDEPTAAKAIDLFIYRIGRELGSLTAALGGLDALVFTGGIGEHAVPIR
                     ARVCRDAAWLGIFLDEEANQQGSPCITKAGGAVSAWVIPTNEEWMIARHTCAIICS"
     gene            1047..>1310
                     /locus_tag="VE844_02145"
     CDS             1047..>1310
                     /locus_tag="VE844_02145"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HZC00190.1"
                     /translation="MSIHLTFYRLVVTLGVILVGMSIPTVPWADVPLRAVIIVRHGEK
                     ATAPLEDPPLSPAGQARAQALLETLRDAGLTAILTTQQLRTRET"
BASE COUNT          271 a          383 c          375 g          281 t
ORIGIN      
        1 gctacggctt ccacgggctc tcctatgagt acattgccag cattctgccc aggtatctga
       61 gggacgccgc tcaagggcgt atcatcgtcg cccatcttgg caatggggcc agtctgtgtg
      121 ccctcaaggc cggcaagagt atcgcctcga cgatgggctt taccgcgctg gatggcctgc
      181 cgatgggaac gcgctgcggg gcgctcgacc ccggtgtggt cttgtatctg ctcacggagc
      241 gagggatgga tcccaacgcg atcactgatg tgctttacaa ccgctcgggc ctgctcggcg
      301 tctcgggggt gagccacgac atgcgcatgc tgctcagcag tgacgagcct acggcagcca
      361 aggcgattga cctcttcatc taccgcatcg gccgggagct cggctcgctc actgctgcgc
      421 tgggcgggct tgacgcactg gttttcaccg gtggcatcgg cgagcacgcc gtgccgatcc
      481 gggcccgcgt atgccgcgat gccgcgtggc tggggatctt cctggatgaa gaggccaatc
      541 agcagggcag tccttgcatt accaaagcgg gaggtgcagt ttcggcctgg gtgatcccga
      601 ccaatgagga gtggatgatc gcgcgacata cgtgcgcgat tatctgcagt tagggttaaa
      661 accaacattc atgggtattg gcaaggattc gaataaaaaa ctcacggatc gcttagtaag
      721 gtgcgtaaga atgtggactc ttctatagtt gagatagtag ggccgaacgt gtaaaaaact
      781 tatcccaagc acgatcgagc ctgtacatta aattgtcccg caaaatccaa ttggcttcga
      841 gcgtttacta aacccccatt gcaaccattt tcctaaccca ttgaaagccg gccatcacca
      901 cgatccgttt tcggtcgttt actaaactat cgtttacgca atcaatggcg atgccgatga
      961 tcggtgtcgg agcaacgatc cgttcgcgat ccggtctatc aggtagatcc ctattcggct
     1021 gcagcaaggc tgggagttct accacgatga gcattcatct gacgttttac cggcttgtcg
     1081 tcaccctcgg tgtgatactg gtcgggatga gtattccaac agtgccctgg gccgacgtcc
     1141 ccctaagggc ggtcatcatc gtccgccacg gcgaaaaggc caccgcgcca ttggaagatc
     1201 ctccgcttag cccagcaggc caagcccgcg cccaggcgct gctcgaaaca ctccgcgatg
     1261 ccggactgac cgccatcctc accactcagc agttaaggac gcgtgagacc
//
LOCUS       DASQSL010000211         1227 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_28327, whole genome shotgun sequence.
ACCESSION   DASQSL010000211 DASQSL010000000
VERSION     DASQSL010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28327"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1003
                     /locus_tag="VE844_02150"
     CDS             <1..1003
                     /locus_tag="VE844_02150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00191.1"
                     /translation="LTFWVMITLLLIWQSDRRPWLLALVGIPVGLALLTKAWPGLFAM
                     LIALPYWHLTRRGQTSHLGYWTVAVILAAAVALPWHLWQYSLHGHFFLREYVGFNLLE
                     RVLQTVEMHHGGPFFYLSVIRRGFSIWGYVLPLAYLLGVWRAWRKGDQGAVLLLCWVA
                     IPLLLFSIAQTKLGWYINMVYPPLALLLAIALADLLGARVALGVVAIGMLVCCLHSPA
                     PADGSPDVKAFAREALQIVNPGDALYVIESACANEGPSHTAGELFLTDTHIRPSMVFY
                     LNRRLTCVTERHVLEGSGLQGAYVIIDGESWPRFSHLGQVVLQVLEDGHGYLLARMK"
BASE COUNT          212 a          352 c          360 g          303 t
ORIGIN      
        1 gttgaccttc tgggtcatga tcacgctgct gctgatctgg caatcggatc gacgcccatg
       61 gctgctggcg ttggtgggca tcccagtggg cctggcactc ctcactaagg cctggcccgg
      121 cctctttgcc atgctgatag ccttgcccta ctggcatctg acacgtagag ggcagacgag
      181 tcatctcggt tattggaccg tggcggttat actggcggcc gccgtagcgc tgccctggca
      241 cctctggcag tacagcctgc atggccattt tttcctccgc gaatatgtgg gatttaatct
      301 gctggagcgt gtattgcaaa ccgtggaaat gcatcatggc gggcccttct tctacctgtc
      361 tgtgatacgg agggggtttt cgatctgggg gtatgtcctg cccttggcct acctgttggg
      421 cgtgtggagg gcatggcgta agggagacca aggggcagta ctattgctgt gttgggtggc
      481 aataccgctg ctgctctttt ccatcgccca gaccaagctc gggtggtaca tcaatatggt
      541 ttacccaccg ttggcgctgc tcctggccat agctttagcg gatttgctcg gcgctcgtgt
      601 ggcgctgggc gttgtggcga ttggcatgct ggtgtgctgc ctccattcgc cagcccctgc
      661 cgacggctca cctgatgtca aagcgttcgc ccgagaggca ttacagatcg tcaacccggg
      721 cgatgccctc tatgtgatcg agtccgcctg cgccaacgag gggccctcgc acactgccgg
      781 cgagctgttc ttgacggaca ctcacattcg cccctccatg gtgttctatc tgaaccgccg
      841 attgacctgc gtgacggagc gtcatgtcct agaagggagc ggcctgcaag gggcgtatgt
      901 gattatcgat ggggagtctt ggccgcgctt cagccatctg gggcaggtgg tgctgcaggt
      961 gctagaggac ggccatggct acctcctcgc ccgtatgaaa tgagcgaatt taattgactt
     1021 ttttgtggat ttgaccataa tgcccgccac ttcctagtac cggtgataca atagggcttc
     1081 tacaccctga ccctttcaat acccgagctc tcgtttgaca agagaagcac aaggaggaat
     1141 ggcgatgcca cactccagcc acactcgctg gatccacctg ctcatactgt tcttcacggt
     1201 tatcacggta tgtcacccgg cctccgc
//
LOCUS       DASQSL010000212         1449 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_152861, whole genome shotgun sequence.
ACCESSION   DASQSL010000212 DASQSL010000000
VERSION     DASQSL010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1449
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152861"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(158..388)
                     /locus_tag="VE844_02155"
     CDS             complement(158..388)
                     /locus_tag="VE844_02155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012625423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HZC00192.1"
                     /translation="MIELIENIAKAIVDKPDQVRVNGVEGENSIVIELRVAKEDIGKV
                     IGKNGRTITAMRTILNATRAQKEKRHVLEVLE"
     gene            complement(1196..1396)
                     /locus_tag="VE844_02160"
     CDS             complement(1196..1396)
                     /locus_tag="VE844_02160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012531618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HZC00193.1"
                     /translation="MASGRVKWFSDSKGYGFIERDDGEDVFVHYTAIKGEGFRSLSEG
                     QEVEFDIVQGPKGLQAANVVKR"
BASE COUNT          306 a          456 c          374 g          313 t
ORIGIN      
        1 ccataaatgc cggctgctga ggacccccat cgctttcccc ctagcgatcg cgcgacacgc
       61 caccacacag ggcatggggg gccccactgg cccgctcggc caggatgact cacacgcacg
      121 gacggctggg tcaggcaaag acccacatgc tgaccgacta ctccagaacc tccaacacgt
      181 gtcgtttctc cttctgggca cgcgtggcat tcagaatcgt acgcatcgcg gtaatcgtac
      241 ggccgttctt cccgatcacc ttgccaatat cttcctttgc gacccgcaat tcgatgacga
      301 ttgagttctc tccctcaacc ccgttgactc gcacctggtc tggcttatcc acaatcgctt
      361 tggcaatgtt ttcgatcagc tctatcatcg cctttgtgtc acctcgctct gttacagcag
      421 ttggctcatg tccctcctga ggagggcctc caacatgtcc ggggggagac ttgtctggaa
      481 caaacaggtc ggacgatccc ccggcttgcc agacgaccag tcggcaacca cacgacgact
      541 aacgagaatc gaaactccct ccgccttcgg gtggaacctg tgtggcaagt cacctcccat
      601 agacgttggg atcgaaagca agcgcgtgga gaagaggggt cgaaccccta tagaccttcc
      661 aggatgcgag ctgtggcgta tgcgcttgcg aatgcccaag gtgaaacgtt cgttgccatc
      721 cgccaccaac gagctatcat actttggctg aacaccattg cagggtgaga accagcggtt
      781 cctacggaca cctccgtgat gcaggggtgt tgcagggatc gtggggagcc aaggataggg
      841 atactcctga tgatgaagga ttcctctcct agtcaagtac cgagggtgcc tccaaccgtc
      901 atgcacctcc gatatgcctg tcgagccaca tgggaggtgt cgatcctcag ggccggcgag
      961 aaacgtcgcc ccttcgatcc ctgctaaagt cagctggtaa tacaccttca gcggttgaaa
     1021 gcgacgaccg ccgatataca gatgggcatc tatcacgcgc atacccggca tcgacattat
     1081 ccatgggact ggctggtcgc gtgaggacgc ctacgcggcg tgccagtccg gggggagcgc
     1141 atcgtactgt aggcattcac ggcacgtcaa cctggtggtt ccagcggtgc aaacgttacc
     1201 tcttgacgac gttagccgcc tgtaagcctt tcggcccttg gacgatatcg aactcaacct
     1261 cctgtccttc actcaacgag cggaaacctt cgccttttat ggcagtataa tgaacaaaga
     1321 cgtcctcacc atcgtcacgc tcaataaatc cgtagccttt gctgtcgcta aaccatttga
     1381 cccgaccact tgccatcgtc ccatccctcc tcttcggccc catagcgtgc atcattcgcc
     1441 tgggttgtg
//
LOCUS       DASQSL010000213         1040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_15789, whole genome shotgun sequence.
ACCESSION   DASQSL010000213 DASQSL010000000
VERSION     DASQSL010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15789"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            245..790
                     /locus_tag="VE844_02165"
     CDS             245..790
                     /locus_tag="VE844_02165"
                     /inference="COORDINATES: protein motif:HMM:NF017416.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00194.1"
                     /translation="MSLSPTPINDVPELTAQVARAAFPNGNRYMQMRDTLGTIYADVQ
                     FADLYPTVGQPAEAPWRLALVTIMQFAENLTDRQAAEAVRGRIDWKYAWGLELTDAGF
                     DFSALSEFRSRLLAGVAEERLLTQLLAHFVERGLLKARGKQRTDSTHIVAAVRELNRL
                     EIVGETLHHALNVLAQLAPDW"
BASE COUNT          219 a          298 c          303 g          220 t
ORIGIN      
        1 cacaccgcga tacgtgggga agcaggtgtc cgaaaatggt gctgccaagc ggtgaggcaa
       61 cagactgttt ttacagacat tacgcatagt gaatcgtctg tccgagaagg cctacgtttc
      121 cggactggcc tccctgtggc cggaaattac acgtatcccg atgttgttgg cgaattctta
      181 tcagttcgtt tgtgggtgaa cacgcgtaca atgtgccccc aaaaactctg atgaggggtc
      241 cgccatgagt ctatctccga caccaatcaa cgatgtgcca gaactgactg cccaagtggc
      301 ccgcgcggcc tttcccaatg ggaaccggta catgcagatg cgcgatacac tgggcacgat
      361 ttacgctgat gtccagtttg ctgacctcta tcccaccgtc gggcaacccg ccgaggcccc
      421 ctggcgcttg gctctcgtga cgatcatgca attcgctgag aacctgaccg accgtcaagc
      481 cgccgaggcc gtgcgggggc ggattgactg gaaatatgcg tggggattag aactcaccga
      541 tgcgggcttt gatttttcgg ccctgagcga gtttcgcagt cggctgcttg caggggttgc
      601 agaagagcgt ttgctcacgc agctcctggc ccactttgtc gagcgggggc tcctcaaggc
      661 gcgggggaaa cagcgcacgg attctaccca tattgtcgcg gcagtccgtg agctcaaccg
      721 cctggaaatt gtgggagaaa cgctccatca cgccttgaat gtgctggccc aactcgctcc
      781 ggattggtga cgcgatcacg tcactccaga gtggtttctc cgctatgggc aacgcgtttc
      841 ggattatcgg ctccccaaag ggcaagccga ccgacaccaa ttcgcagaaa ccatcgggcg
      901 agacggatcg cacttactca cccaagtgta tcgtgcagac gcacccccac atgtacggac
      961 ggtccctgct gtggagttat tacggcaggt gtgggtccaa cactactacc aggaaaacgg
     1021 tgtggtccac tggcgggatg
//
LOCUS       DASQSL010000214         1805 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_15792, whole genome shotgun sequence.
ACCESSION   DASQSL010000214 DASQSL010000000
VERSION     DASQSL010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1805
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15792"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(186..515)
                     /locus_tag="VE844_02170"
     CDS             complement(186..515)
                     /locus_tag="VE844_02170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HZC00195.1"
                     /translation="MITRSTQGKGLAVLTLYTYFRSSAAYRVRIAANLKGIRYRPQFV
                     HLLKGEQHLPAYRTLNPQGLVPQVYNARRFGCDLHDFPRIQAIDQHCLALWAFQQAAP
                     ENQPDAA"
     gene            complement(560..913)
                     /gene="smbP"
                     /locus_tag="VE844_02175"
     CDS             complement(560..913)
                     /gene="smbP"
                     /locus_tag="VE844_02175"
                     /inference="COORDINATES: protein motif:HMM:NF028095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="small metal-binding protein SmbP"
                     /protein_id="HZC00196.1"
                     /translation="MKKNIAAALIISALAFSGGNVFAAAGEQRSQHIAEALKHTKEAL
                     DHAKQGHNDVLIEHAKAARKHAKEIIGDDVGLEIQKTLTNLRVAVEQAEKGDSPGAIK
                     SLEEVVANLNDIKDQ"
     gene            complement(1001..1765)
                     /locus_tag="VE844_02180"
     CDS             complement(1001..1765)
                     /locus_tag="VE844_02180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008262922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HZC00197.1"
                     /translation="MTLLPLFWMLMVSLMPTGLANAFPPRLLPDTFTFEHYQTLFTRL
                     ELARYLFNSALLAIVVTIIALLLNSMAGYAFAKLRFSGREEIFRVLLSALVIPAQVGM
                     LPLFLMLKYLGLINTYFGIIIPGMASIFGIFLIRQYALSIPDSLLDAARIDGAGEFRI
                     YWSVVLPLCRPILITLALFTFMGTWNDFLWPLIVMTDDTMYTLPVALANLLGEHVQDT
                     ELMMAGAVLTVLPVMLVFVVLQRHYLEGISVGAIKG"
BASE COUNT          437 a          475 c          498 g          395 t
ORIGIN      
        1 cgaataaccc gccttttccg taaccaggga tctgagcgag ggtgaagtta aacctaccag
       61 gtgatgttcc tcagcaaatt gctttaattt gggatcagca ataaccttca tgatggatct
      121 ccttatcgta aaacggagaa aatgatgttt tttgaccggt agatgcaagg agaattccat
      181 tgtgcttatg cggcgtcagg ctgattctct ggggctgcct gttgaaaggc ccaaagtgca
      241 aggcagtgct gatcgatggc ctggatccgg ggaaaatcat gcagatcgca gccaaaacgc
      301 cgcgcgttat agacctgcgg caccagacct tggggattga gcgtgcggta ggccggcagg
      361 tgctgctccc ccttgagcag atgcacgaac tgcggtcgat agcgaatacc cttgagattg
      421 gcggcaatgc gcacccggta ggccgccgag ctcctgaaat aggtataaag cgtgagcact
      481 gccaaaccct tgccctgggt cgagcgcgtt atcatcatgg agacgctccc gcatccgccg
      541 caggagcgta gctgtttatt tactgatcct taatatcgtt caagttcgcg accacctctt
      601 ccaggctctt gatagccccc gggctatctc ctttttcagc ttgttcaacc gcaactctca
      661 ggtttgtcaa ggtcttctgg atctctaaac cgacatcatc gcctatgatc tctttcgcat
      721 gcttgcgcgc tgccttggcg tgttctatca gcacgtcatt atgtccctgt ttggcatgat
      781 cgagcgcttc tttggtatgc ttgagtgcct ctgcaatgtg ttgcgagcgc tgctcacccg
      841 cagcagcgaa gacattgccc cccgaaaagg ctaatgcact tatgatcaat gcggctgcta
      901 tatttttttt cataatctat gtcctttcta gcgtttgttg ttgtggaatc aaaagatcgc
      961 ggtggattcg gaagacgcga cggatccatt ttacatcgct ttagccctta atagcaccca
     1021 ccgagatgcc ttcgaggtaa tgcctttgca gaactacgaa caccagcata acgggtagca
     1081 ccgtcaacac cgccccggcc atcatcagct cggtgtcctg gacatgctcg ccaagcaggt
     1141 tggcgagcgc caccggcaag gtatacatcg tatcgtcggt catgacgatg agcggccaga
     1201 ggaagtcgtt ccaggtaccc atgaaggtaa acagggccag tgtgatcagg atcggcctac
     1261 acagaggtaa gaccaccgac caatagatcc gaaactcgcc cgccccgtcg atccgggcgg
     1321 catccaggag actgtcggga atggaaagcg cgtattggcg gatcaaaaag atcccgaaga
     1381 tgctcgccat gcctgggatg atgatcccaa aataggtatt gatgaggccc aggtacttaa
     1441 gcatcagaaa cagcggcagc atcccgacct gcgccgggat gaccaaggct gaaaggagta
     1501 cgcggaagat ctcctcgcga ccgctaaagc gtagtttggc aaaggcgtaa ccagccatgg
     1561 aattgagcaa taaggcaatg atcgtgacca cgatggctaa aagtgcgctg ttgaacagat
     1621 agcgcgcgag ttcgagccgg gtgaacaggg tctgataatg ctcaaaggta aacgtgtcgg
     1681 gcagcaggcg cggcggaaac gcgttggcaa ggcccgtggg catcaacgag accatgagca
     1741 tccagaacag gggcagcagg gtcaaggcgt ccccatcagc aaaagcccat agagcagcgt
     1801 gagcg
//
LOCUS       DASQSL010000215         1120 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_70400, whole genome shotgun sequence.
ACCESSION   DASQSL010000215 DASQSL010000000
VERSION     DASQSL010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70400"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1070)
                     /gene="leuS"
                     /locus_tag="VE844_02185"
     CDS             complement(<1..1070)
                     /gene="leuS"
                     /locus_tag="VE844_02185"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012638835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HZC00198.1"
                     /translation="MDEHYLPAQLEPEIQARWDQAGVFKAIENKGRDKFYCLSMFPYP
                     SGKLHMGHVRNYTIGDVIARYQWMQGKNVLQPMGWDAFGLPAENAAIDNRVPPARWTY
                     ENIDYMRSQLKRLGFGYDWSRELTTCRPEYYRWEQWFFTRLLEQGLVYKKTAVVNWDP
                     VDRTVLANEQVIDGRGWRSGALVERRSIPQWFLRISAYADELLEELERLPGWPEAVRI
                     MQRHWIGRSEGIEAEFAIVGRKGSLIIFTTRPDTIMGATYLAVAPEHPLATQVAARGN
                     PKVAAFLEECQHTGLTEAELETMEKKGLPLGIEAIHPISGERLPVWVANFVLMGYGTE
                     AVMAVPAHDQRDFEFAHRYRLP"
BASE COUNT          243 a          347 c          306 g          224 t
ORIGIN      
        1 atgggcaggc gatagcggtg tgcgaactcg aaatcgcgct gatcatgggc cggcacggcc
       61 atcaccgcct cggtgccata gcccataagc acgaagttcg ctacccacac aggcagcctc
      121 tcaccgctga tcggatgaat agcctcaatc ccaaggggca gacccttttt ctccatggtc
      181 tcaagctctg cctcagtcag gcctgtgtgc tggcattcct cgaggaacgc ggcaacctta
      241 gggttcccgc gagccgccac ttgggtggcg agggggtgct cgggagccac cgccagatag
      301 gtcgcaccca tgatggtgtc gggacgggtg gtgaagatga tcagagatcc cttcctccct
      361 acgatggcaa actcggcctc gatcccctcg gaacggccga tccaatgccg ctgcatgatg
      421 cgcacagcct cgggccagcc gggaagcctt tcaagctctt cgagcaactc atcggcatag
      481 gccgagatcc gcaaaaacca ttgggggatg ctgcgccgtt ctactaaggc ccctgagcgc
      541 cagcctcgcc catcgatcac ctgctcattg gcaagcaccg tccgatccac cggatcccaa
      601 ttgaccaccg cggtcttctt atagaccagc ccctgctcga gcaagcgcgt aaagaaccat
      661 tgctcccacc ggtaatattc aggtcggcag gtggtcagtt cccggctcca gtcataaccg
      721 aagcccaagc gcttgagctg gctccgcata taatcaatgt tttcataagt ccagcgtgcg
      781 ggcggcacgc ggttgtcaat ggcggcattc tccgcaggaa gcccaaaggc gtcccagccc
      841 atcggctgca ggacattctt cccctgcatc cactggtagc gggcaatcac atccccaatc
      901 gtataattgc ggacatggcc catatgcagc ttgccgcttg ggtaggggaa catcgacagg
      961 caataaaact tgtcgcggcc cttattttca atagctttga agaccccagc ttggtcccag
     1021 cgggcctgga tctcgggctc taattgagcg ggaaggtaat gttcatccat aaagaattcg
     1081 ctgcaagtga acttaagggt taaagaatac cgccgggtgc
//
LOCUS       DASQSL010000216         3381 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_110860, whole genome shotgun sequence.
ACCESSION   DASQSL010000216 DASQSL010000000
VERSION     DASQSL010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3381)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3381)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3381
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110860"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            24..1211
                     /locus_tag="VE844_02190"
     CDS             24..1211
                     /locus_tag="VE844_02190"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018231601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HZC00199.1"
                     /translation="MLSGMRPTGSLHLGHYHGVLKNWLKLQHEYECFLFVADWHALTT
                     EYEDPAIIADSIWDMVIDWLAVGINPGEATLFIQSKVPEHAELHVLLSMITPLGWLER
                     VPTYKDQQEKLKDKDLSTYGFLGYPLLQAADILIYKAGYVPVGEDQVAHIELAREVAR
                     RFNYLYGREPGFEEKAEAATRKMGKKGARLYFDLRKRYQEQGDTEALETAQAFLESQQ
                     NVSLGDRDRLFGYLEGGGRAILAEPYPLLTAESKMPGIDGEKMSKSYGNTIGLREDSD
                     SVVHKLRTMPTDPARVRRQDPGDPEKCPVWKLHQIYSPEEVKAWVQQGCRSAGIGCLD
                     CKQPLIDAVLAELAPIRERAEEYMSDREAVRGIIAEGCETAREVARQTMEEVRQAMGL
                     VYR"
     gene            1214..2038
                     /locus_tag="VE844_02195"
     CDS             1214..2038
                     /locus_tag="VE844_02195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013220919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ScpA family protein"
                     /protein_id="HZC00200.1"
                     /translation="MGELDAEGTLPEIHLTLAAAPVALVQGRPLMDLPRDLYIPPEAL
                     RVFLEAFEGPLDLLLYLIKRQNLDILHIPIAEITRQYMRYIELMHEIEIELAAEYLVM
                     AAILAEIKSRMLLPRPPGVEEEDDPRADLARRLEEYERYKRAAQELDALPRLERDIYA
                     VLVEFPARQIIKETPPAITLDALHHAFGQVLRRASTLAHHPIQRETLSVRERMVMILN
                     RVSVSQFIEFSRFFTAEEGRLGVIVAFLALLELLKEGLVEIVQTEPDGLIYTKAAV"
     gene            2035..2637
                     /gene="scpB"
                     /locus_tag="VE844_02200"
     CDS             2035..2637
                     /gene="scpB"
                     /locus_tag="VE844_02200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005224190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HZC00201.1"
                     /translation="MTLTQIKNIIEAALMVSERPLTLERLMILFKPLEIDGSLYEQVT
                     QALAELRQEYTGRGIELKEVASGFRFQARAELSPWLNQLWEERSPRYSRALLETLAII
                     AYRQPITRGEIEALRGVSVSSPIIRTLLEREWIRIAGHREVPGRPAVYVTTPQFLDHF
                     NLKSLAELPLLSESPGELLRPDDPAPALDRAAPIAREAAG"
     gene            2659..>3381
                     /locus_tag="VE844_02205"
     CDS             2659..>3381
                     /locus_tag="VE844_02205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007041841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HZC00202.1"
                     /translation="MDPAPERLQKILARAGLGSRRTIESWIKAGRVSVNGRIAQLGDG
                     ARTGDRIAVDGRLVPLDRRLAPPTRVLAYYKPTGLVCTRQDPEGRPTVYEKLPKLSRG
                     RWIGIGRLDCMSAGLLLFTNDGALAYRLMHPSSRIEREYAVRVLGRVGDDVLKRLLDG
                     VELEDGWARFGSIVDAGGQGTNHWFRVTLCEGRNREVRRLWESQGITVSRLIRIRYGS
                     VVLPRDKHPGEGWELTASEIQAL"
BASE COUNT          707 a          928 c         1045 g          701 t
ORIGIN      
        1 tgagtccaac tgtaaaccga cgcgtgcttt cgggcatgcg gcccacggga tcgctccatc
       61 tggggcacta tcatggggtg ctcaagaact ggcttaagct ccagcatgag tatgagtgtt
      121 ttttattcgt ggcggattgg catgcgctga ccacagaata cgaggatccg gcgatcattg
      181 ccgactctat ctgggatatg gtgatcgact ggttggccgt cggcatcaat cccggcgagg
      241 cgaccctgtt tatccagtcg aaggtacccg aacatgccga actgcatgtg ttattatcga
      301 tgattacacc gcttggctgg ttggaacggg tgcccaccta taaggaccag caggaaaagc
      361 tcaaggataa ggatctctct acctatggtt ttctaggcta tcccttgctc caagccgccg
      421 atatcctcat ctacaaggcc ggctatgtgc cggtgggcga agaccaggta gcgcatatcg
      481 aactggcgcg cgaagtggcg cgcagattca attatcttta tgggcgcgaa cccggctttg
      541 aagagaaggc ggaggccgct acccgcaaga tgggtaagaa aggcgcaagg ttgtacttcg
      601 atcttcgcaa acgttatcag gaacagggcg atactgaggc tctagagacc gcgcaggcgt
      661 ttctcgagtc ccagcagaat gtctccttgg gtgatcggga tcgtttgttt gggtatctcg
      721 aaggcggtgg acgggctatt ctggcggaac cctatccgtt gctgaccgcg gaatcgaaga
      781 tgccggggat cgatggagaa aagatgtcca aatcctatgg caataccatt ggtctccgag
      841 aggacagcga ttcggtcgtg cacaaactga gaaccatgcc gaccgatccg gcgcgtgtca
      901 gaaggcagga tccaggcgat ccggaaaaat gcccggtgtg gaagcttcat cagatctact
      961 ccccggaaga ggtcaaggct tgggtccagc agggatgccg tagcgccggc atcggttgct
     1021 tggactgtaa acagccgctc atcgatgccg tgctggccga gctagcacct atccgggagc
     1081 gggcagaaga gtatatgagc gatcgggagg cggtgcgggg gatcattgcg gaagggtgcg
     1141 aaaccgcgcg cgaagtggcc cggcagacga tggaggaggt acgtcaagcg atgggcctgg
     1201 tatataggta aacatgggcg agcttgacgc agaggggaca ctacccgaga tccatcttac
     1261 ccttgcagct gcgcctgtag cgctggtgca gggccggccg ctgatggatc tgccacggga
     1321 tctgtatatc ccgcccgagg cgttgagggt gtttctcgaa gcctttgaag gccccctgga
     1381 tctgctttta tacctcatca agcgacaaaa cctggatatc ttgcatatcc cgatcgccga
     1441 gatcacccgt cagtacatgc gctatatcga gttgatgcac gaaatcgaga tcgaactcgc
     1501 ggccgagtac ttggtgatgg ctgcgatcct ggccgagatt aaatcgcgga tgctcctgcc
     1561 gcgcccccca ggggtagagg aagaggacga tccgcgcgcc gatctggccc gtcgcttgga
     1621 ggagtatgag cgctataaaa gggctgctca ggaactcgac gccttgccga ggttagagcg
     1681 ggatatctat gctgtcttgg tggagtttcc cgctagacag atcatcaagg agaccccgcc
     1741 tgccatcacg ctcgatgcct tacaccatgc cttcggtcag gtcttgaggc gggccagcac
     1801 attggcccac caccctatcc agcgcgagac tctctccgtg cgcgaacgga tggtcatgat
     1861 cctaaatcgc gtgagcgtgt cccaatttat cgaattcagc cggtttttta cggccgaaga
     1921 agggcggctg ggcgtgatcg tcgcgtttct tgccctcctt gagctgctca aggagggcct
     1981 tgtcgagatc gttcaaactg aacccgacgg tctgatctat accaaagcgg ctgtatgact
     2041 ctcacgcaga taaagaatat tatcgaagcg gccttgatgg tctcggaaag acccctgacg
     2101 ctcgagcgat taatgatctt atttaagcct ttggagatag acggctcgct ctacgaacag
     2161 gtcacacagg cgctggcgga actgcggcaa gagtacaccg gccgcggcat agagcttaaa
     2221 gaggtggcca gcggctttcg ctttcaggcc cgggcggaat tatcgccgtg gctcaatcag
     2281 ctgtgggagg agcgatcgcc gcgctattca cgggcactgc tcgagaccct ggccattatc
     2341 gcctatcgtc agcccattac ccggggtgag attgaagcct tgcgaggggt cagtgtcagt
     2401 agccctatta tcagaacctt gctcgaacgc gagtggatcc gcatcgccgg gcatcgtgaa
     2461 gtccccggga gacccgcggt ctatgtcacg acaccgcagt tcctggatca ttttaatctc
     2521 aagagcttgg cggaactccc tctactctcc gaatcaccgg gcgaacttct taggccggac
     2581 gaccccgcac cggccctcga tcgagcagcg ccgatcgccc gcgaggccgc gggctaagtt
     2641 ctcagtccaa gcgtaccgat ggatcctgcc cccgagcgcc tgcaaaagat cctggcccgc
     2701 gccggcttag gatcgcgccg taccatcgag tcctggatca aggccggccg cgtctcggtc
     2761 aatggccgta ttgcgcagct tggggacggt gcgcgaacgg gggacaggat cgccgtcgat
     2821 ggacgtttgg tcccccttga tcgcaggctt gcgcccccca cgcgggtact cgcttattac
     2881 aagcccaccg ggctcgtatg tacccgccag gatcccgagg gacgtccaac agtgtatgaa
     2941 aagctcccca agctgagccg cggccgttgg atcgggatcg gacgcttgga ttgcatgagc
     3001 gcgggtttgc tgctcttcac caatgatgga gccttggctt accggttgat gcacccttca
     3061 agccgaatcg agcgcgagta tgccgtccgg gtcctcggga gggtaggaga cgatgtgctc
     3121 aaacgccttc tggacggggt cgagctcgag gatggatggg cacgcttcgg atctatagtc
     3181 gatgccggtg gacagggaac caaccattgg tttcgagtga cgctgtgcga gggccgtaac
     3241 cgtgaggtcc gacgcctgtg ggagtcgcag gggatcacag tgagccggct catacggata
     3301 cgctatgggt ccgtggtcct gcctcgagat aaacaccctg gagaggggtg ggaattgacg
     3361 gcgtctgaaa tccaggcgct t
//
LOCUS       DASQSL010000217         2223 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_152928, whole genome shotgun sequence.
ACCESSION   DASQSL010000217 DASQSL010000000
VERSION     DASQSL010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2223
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152928"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(92..496)
                     /locus_tag="VE844_02210"
     CDS             complement(92..496)
                     /locus_tag="VE844_02210"
                     /inference="COORDINATES: protein motif:HMM:NF024752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC00203.1"
                     /translation="MIGGINTRKINHLIQTYEGKRHDKKIVDDENPVLPKEVSLYKDT
                     GFQGYEPADITTFQPQKKPKGKELTAEQKEQNTLISKIRIVIEHIISGVKRCRIVKDL
                     FRNTKERYDDLVMEIACGLHNFRVECRDSYSR"
     gene            complement(493..1038)
                     /locus_tag="VE844_02215"
     CDS             complement(493..1038)
                     /locus_tag="VE844_02215"
                     /inference="COORDINATES: protein motif:HMM:NF025000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC00204.1"
                     /translation="MGKKDGGRWMFSYAAIKDDARLFLAMTGLTRNEFEKMLPAFQKA
                     WDEYIQHAYIDREGRQRQYGGGQQASTLVSMEDKLLFILYYVKVYPLQEILAFEFGIS
                     QSMAKEWIHLLSGVLKRALDFGGHLPQRHPKQLHRVLQEESEAEYGIDGTERRRQRPV
                     GEEQQKLYYSGKKKRIRSKML"
     gene            complement(1315..>2223)
                     /locus_tag="VE844_02220"
     CDS             complement(1315..>2223)
                     /locus_tag="VE844_02220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013249893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HZC00205.1"
                     /translation="ESPAIRHAIERARRAAQSPATILLLGESGTGKEIFARAIHAWSP
                     RRLQPFVVVNCAALSEELIASDLFGHERGAFTGAHQRKQGKLELAAGGTVFLDEVSEM
                     QPALQSKLLRVLQEHTFERVGGTATIQVDIRVIAATNRDLSQAVKAGTFREDLFFRLN
                     VIPLTLPPLRERKEDIPLLVELLVQKYRLEVKKPGMRLTPAALEVLGEYEWPGNIREL
                     ENVIERVVVLSTGEEIQPEDLAVPTFGVFVPTAGASRYQRRLEGAEKELLLQALKEHR
                     GDKQAAARVLGIALSTLYAKLKKYQL"
BASE COUNT          451 a          647 c          589 g          536 t
ORIGIN      
        1 actggtacgc acggttctgc ggggaggggg tgatagcaat atcatctcct tacccaacca
       61 gctaccgctt aaacccacta taaaatagac attatcgcga ataagagtct ctacattcga
      121 ctctaaagtt gtgcaatcca caggcgattt ccatgaccag atcgtcatac ctctccttgg
      181 tattgcggaa cagatctttg acaattcgac accgtttgac cccactgatg atgtgttcaa
      241 tgacaatacg gatttttgaa ataagggtat tttgctcttt ctgttctgcc gtcaattctt
      301 tccctttggg ttttttctga ggttgaaaag tcgttatatc agccggttca tagccttgaa
      361 atcctgtatc tttatacagc gagacctcct ttggaaggac gggattttcg tcgtctacga
      421 tctttttgtc atggcgttta ccttcatagg tttggatcaa gtgattgatc ttgcgcgtat
      481 taattccgcc aatcacaaca tttttgaccg tatgcgcttt tttttaccac tgtagtaaag
      541 tttctgttgc tcttcaccga ccggccgttg ccgtcgtcgt tcggttccgt cgattccata
      601 ctccgcttca gactcctcct gcagaaccct gtgtaattgc tttggatgcc gttgtggtag
      661 atggcctcca aaatccaatg cccgtttaag aactccgctc agcaggtgaa tccactcctt
      721 agccatactt tgggagatac caaactcaaa ggcaagaatc tcttgcagcg gataaacctt
      781 gacgtaatac aagataaaaa gaagcttgtc ctccattgac accagcgttg atgcctgctg
      841 ccccccgccg tactgccgtt gacgaccttc tcgatcaatg taagcgtgct gaatatactc
      901 atcccaagct ttttgaaaag caggaagcat cttctcaaat tcattccggg ttaaacccgt
      961 catggccaga aatagccgag cgtcgtcttt aattgcagcg tatgaaaaca tccatcttcc
     1021 cccgtccttt ttacccacgt atctatgaag tacttctcac cccattcttt ttcttttatc
     1081 cttcctcgcc attgagcagg gcaacccttg tgccaagcgc atgaggaagg ggccggacag
     1141 tcggaagccc tgagattcgt gggggtgggc gacatcccct gcccggggcg gccaccgttt
     1201 ccgaggaggg atcattccga attctcgaaa actttccgga tccccggaat gcaaccgcaa
     1261 cgaggcaaac gccggggtcg aggaggaagg ggtgtggaag gggagggggg caggctagag
     1321 ctggtacttc ttcagcttcg cgtagagcgt ggagagggcg atgcccagga cccgagcagc
     1381 ggcctgtttg tcccccctat gctccttcag ggcctggagc aggagctcct tctccgcccc
     1441 ctcaagccgc ctctggtagc gcgaggcgcc agccgtgggc acgaagacac cgaaggtggg
     1501 gaccgccaga tcctccggct ggatctcctc cccggtgctc aacaccacga cccgctcgat
     1561 cacattctcc agctctcgga tgttcccggg ccactcatac tcccccagca cctcgagggc
     1621 cgcgggggtg aggcgcatcc cgggtttctt gacctccagc ctgtatttct gcacgaggag
     1681 ctccacgagc agcgggatgt cctccttccg ctccctgagc ggcggcaggg tgagggggat
     1741 gacgttgagg cgaaagaaca ggtcttcccg gaaggtcccg gccttgacgg cttgggatag
     1801 atcgcggttg gtggccgcga tcacccggat atcaacctgg atcgttgcgg ttcccccgac
     1861 ccgctcaaag gtgtgctctt ggaggacccg caggagcttg ctctggaggg cgggctgcat
     1921 ctcgctgacc tcgtctaaga acaccgtccc cccagccgcc agctccaatt tcccctgttt
     1981 tctctgatgg gccccggtaa aggcccctct ctcatggccg aagaggtcac tggcgatgag
     2041 ctcttcggag agggcggcgc agttgaccac cacaaagggc tgcagccgcc gaggactcca
     2101 ggcatggatc gctcgggcaa agatctcctt gccggtgcca ctctcgccta acaggaggat
     2161 ggtcgccggg ctctgcgcgg cgcggcgggc ccgctcgatg gcgtgccgga tggcggggct
     2221 ctc
//
LOCUS       DASQSL010000218         2489 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_42967, whole genome shotgun sequence.
ACCESSION   DASQSL010000218 DASQSL010000000
VERSION     DASQSL010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2489
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42967"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..681
                     /locus_tag="VE844_02225"
     CDS             <1..681
                     /locus_tag="VE844_02225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C-terminal helicase domain-containing protein"
                     /protein_id="HZC00206.1"
                     /translation="LSRQLREAEGIQRKGLVLALLMRLKQICNHPSQWLGDGAWREED
                     SGKLARLRDIAEVIGAKQEKALVFTQFKEITAPLAAFLGAVFGRPGLVLHGATEVKKR
                     KDLVRRFQEDERVPFFVLSLKAGGAGLNLTAAAHVIHFDRWWNPAVENQATDRAFRIG
                     QTKNVLVHKFICQGTVEDKIDQMIEGKQQLAGDFLGGGVDMLLTEMKDEDLLKLVSLD
                     LNAAMKEV"
     gene            685..1719
                     /locus_tag="VE844_02230"
     CDS             685..1719
                     /locus_tag="VE844_02230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SWIM zinc finger family protein"
                     /protein_id="HZC00207.1"
                     /translation="MSYFAWKPYVPVAKRRQQAAQKIAKFKKQGHPIEPVVIEGRTIA
                     RSFWGKAWCDNLERYSDYANRLPRGRTYVRNGSVIDLQIGGGIVTALVSGSEIYQVKM
                     SVAPVPTLHWSAICRDCAGSIDSLVELLQGRLSKGVMDRVCQQGSGLFPSPKEIKLSC
                     SCLDWADMCKHVAAVLYGVGARLDARPELLFKLRQVDERDLIDRAGKDIPLAKDTPKA
                     AKILDDGDLSALFDLEMTETTTSDIPSRRKPSKMSAAKQPPTPEPTPVKRAVTNKKVS
                     TAHKTKLSTTTRAEKGLPAPKPTPAKKTVTSKKTSMASNTESSRAAPASISRMRKSTK
                     TGQLSRGPRT"
     gene            1769..1894
                     /locus_tag="VE844_02235"
     CDS             1769..1894
                     /locus_tag="VE844_02235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00208.1"
                     /translation="MAPQNGHFFVTLHPVQRAAAIFGKRVRWEIEGALQIWYCQL"
     gene            1923..2192
                     /locus_tag="VE844_02240"
     CDS             1923..2192
                     /locus_tag="VE844_02240"
                     /inference="COORDINATES: protein motif:HMM:NF013561.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="HZC00209.1"
                     /translation="MMSLKLPDDLLREVEEEARRTGLTKSQVIRRLVEEGFKHKRKAK
                     SPVTCADLAGDLIGSLNGPPDLSTNRRYLEEAIWEDFERGRRGDH"
     gene            2170..>2489
                     /locus_tag="VE844_02245"
     CDS             2170..>2489
                     /locus_tag="VE844_02245"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HZC00210.1"
                     /translation="MDAEVIIDTGPIAAWLSRRDKHHEWAREQFAVLGPPLFTCEAVL
                     SETAHLLVRAGGNGTEVVTLIRRGVFQIAFDLQAEAEPIERLMQRYHNAPMSLADACL
                     VRIS"
BASE COUNT          556 a          662 c          786 g          485 t
ORIGIN      
        1 ctgtcccggc agctccgcga ggccgaaggg attcagcgca aagggctggt gctagcgctg
       61 ctcatgcggc tgaagcagat ctgcaatcac ccctcgcaat ggctcggcga cggcgcgtgg
      121 cgtgaagaag acagcggtaa actggcgcgc ctgcgcgata tcgcggaggt cattggcgcc
      181 aagcaggaaa aggcgctggt gttcacccag ttcaaggaaa tcacggcacc gctcgcggcg
      241 tttctcggcg ccgtcttcgg acgtccaggc ctcgtcctgc acggcgcaac cgaggtcaaa
      301 aagcgtaagg acctcgtgcg ccgcttccag gaggacgagc gcgtgccgtt tttcgtgctg
      361 tcgctcaaag ccgggggcgc tggtctcaat cttaccgccg ccgcgcatgt cattcatttc
      421 gaccgctggt ggaatccggc ggtcgagaat caggccacgg accgggcctt ccgcatcggg
      481 cagaccaaga acgtgctggt gcacaagttt atctgccagg gcactgtgga agataaaata
      541 gatcagatga tcgaagggaa gcagcaactc gcgggggatt tcctgggagg cggggtggat
      601 atgttgctga ccgagatgaa ggacgaagat ttactgaaac tggtatcgct ggatttgaac
      661 gcggcgatga aggaggtatg attcatgagt tattttgcct ggaaacctta tgtgccggtg
      721 gccaaacggc ggcagcaggc ggcgcagaaa atagccaagt tcaagaagca ggggcatcct
      781 attgagcccg tggtgatcga aggccgcacg attgccagga gtttttgggg caaggcctgg
      841 tgtgacaatc tggagcgtta cagcgattac gctaaccggt tgccgcgcgg gcgcacctat
      901 gtgcgtaacg gctccgttat tgatctccag atcggcgggg gcattgtgac agccctggtc
      961 agcggctcgg agatctacca ggtgaagatg agtgttgcgc cggttccgac gttacactgg
     1021 agcgccatct gccgcgactg cgcgggaagc atcgactcac tggttgagct tttacagggg
     1081 cggttgtcca agggggttat ggatcgcgtc tgtcagcaag gcagtggcct gtttccgtcg
     1141 cccaaggaaa tcaagctctc gtgcagctgc ctagactggg ccgatatgtg caagcatgtg
     1201 gcggcggtgt tgtatggcgt cggtgcccgg ctcgacgcca ggcccgagct gctcttcaag
     1261 cttcgccagg tggacgaaag ggacctgatc gatagggcag gtaaggatat tcctctggca
     1321 aaggacacgc ctaaagcggc aaagatcctc gacgacggcg acctctccgc gctctttgat
     1381 ttggagatga ccgaaacgac cacatccgac atcccctcgc gccgtaaacc ttccaagatg
     1441 tcagcggcaa aacagcctcc tacacctgag ccgacaccgg tgaagagagc agtgacgaat
     1501 aaaaaagtgt cgacggccca caaaacgaag ctctcaacaa caacccgagc tgaaaagggg
     1561 ctgcctgcgc ctaagccgac accggcgaag aaaacggtga cgagcaaaaa aacgtcgatg
     1621 gccagcaaca cggagtcctc aagagcagcc ccggccagta tcagcaggat gcgtaagtcg
     1681 accaaaacag gccagctgtc taggggtccg cgtacatgaa gtgctcatgt agagctaaac
     1741 atgagcacgg agtgtacgcg caccccaaat ggcgccgcaa aatggccact tttttgtcac
     1801 gcttcatcct gtgcagcggg ctgcggctat ctttggcaag cgggtgcgct gggagatcga
     1861 gggcgcactt caaatttggt attgccaatt gtagcaagtc gtaataccct tatgttatga
     1921 agatgatgtc gcttaaattg cccgatgatc tgctacggga ggtggaggag gaggcgcgcc
     1981 ggactggcct cactaagtcg caggtgatac ggcgccttgt ggaggaggga tttaagcaca
     2041 agcggaaggc taagtcacct gtcacctgtg cagatctggc gggcgacttg atcggctcgc
     2101 tcaatggacc gcccgacctg tccacgaatc ggagatacct tgaagaagct atttgggagg
     2161 acttcgagcg tggacgccga ggtgatcatt gatacggggc caattgcagc gtggttgagc
     2221 cgtcgcgata agcatcatga gtgggcaagg gagcagtttg ctgtcctcgg gccgcccttg
     2281 ttcacctgcg aggcggtgct aagtgaaacg gcacatttgc tcgttcgtgc tgggggcaac
     2341 ggtacggagg ttgtaaccct cattcgccgc ggtgtgttcc aaattgcatt cgacctccaa
     2401 gccgaggcgg aaccgataga acggctgatg cagcgctacc ataatgcgcc catgtccctg
     2461 gccgacgcct gtctcgtacg gatttccga
//
LOCUS       DASQSL010000219         1433 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_139124, whole genome shotgun sequence.
ACCESSION   DASQSL010000219 DASQSL010000000
VERSION     DASQSL010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1433
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139124"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1272
                     /locus_tag="VE844_02250"
     CDS             <1..1272
                     /locus_tag="VE844_02250"
                     /inference="COORDINATES: protein motif:HMM:NF033592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC00211.1"
                     /translation="IKKPNAFIRPQGLYSLPVTIKTFFTQCLAQDHSCRTAVATAKDR
                     GWLPPHASPGTAAYCRARDALAAEGLQRALEHTAQALDASVSDQHLWLGRQVQVVDGT
                     GIALPDTEANQEDYPQPSEQKPGCGFPVLRLVAFMSLATGAVSRYCIGNLHDHEQRLF
                     QALRAHLKGGEVVLGDRNFGTFANLVLLKRQGVDGVFRRHQARGAGAKTIKPLGKDDH
                     LVRWSFIPIKQHPVWLDASVRLPSTLVVREVTFEVTQPGFRTKSVTLVTTLLDAKHYP
                     AWALAELYFRRWRMELWLRDLKITMDMDRLRTQTPARVRAELAMFLVGYNLIRTVMFD
                     AAQVGEVRLEQLSFKSALMRFGLWCAGLRHSTRIRVWLLGYQAMLSDLARDLNPDRPG
                     RYEPRVVKRRPKPFPRMQQPRQVLRQQLLRA"
BASE COUNT          274 a          416 c          421 g          322 t
ORIGIN      
        1 atcaagaagc ccaacgcctt tatccggccc caaggcctct attcgctacc cgttaccatc
       61 aagaccttct tcacccagtg cctcgctcag gatcattcgt gtcgcaccgc tgtggccacc
      121 gccaaagatc gtggctggct accaccgcat gcctcgcccg gtacggccgc ctactgtcgt
      181 gcccgtgatg ccttggccgc cgaagggctc caaagagccc tcgagcacac cgctcaagcc
      241 ctcgacgcta gcgtttcaga tcagcacctc tggttgggcc gacaggtcca agtcgtcgat
      301 ggcaccggta ttgccctgcc tgataccgag gccaatcaag aggactatcc ccagccttcg
      361 gagcaaaagc ccggctgcgg ctttcccgtc ttgcgcctgg tggccttcat gtctttggcc
      421 accggtgcgg tgagtcgcta ttgcatcggc aacctccatg atcatgaaca acgcctcttc
      481 caagcgcttc gcgcgcacct caaggggggc gaggtcgtgc tcggcgaccg taactttggc
      541 acctttgcca atctggtttt gctcaagcgt caaggtgtcg atggcgtctt tcgtcgccat
      601 caggcccgcg gggctggggc gaaaaccatc aagcctctgg gtaaagacga tcacctggta
      661 cgttggtcct tcattccgat aaaacaacat cccgtctggc tcgatgcgtc ggtgaggttg
      721 ccctcgacgt tggtggtgcg tgaagtcacc tttgaggtga cgcagcctgg gttccgcacg
      781 aaatcggtga cgctggtgac cacgctgttg gatgccaagc attatcccgc ttgggcactg
      841 gctgagcttt acttcagaag gtggcggatg gaactgtggc tgcgggacct caagatcacc
      901 atggacatgg acaggcttcg cacccagacg cctgcccggg tgcgggcgga gttggccatg
      961 ttcctggtgg gctacaatct gattcggacc gtcatgttcg atgccgccca ggtgggcgag
     1021 gtgcggcttg agcaattgag ttttaaatcg gcactgatgc gcttcgggtt gtggtgcgct
     1081 gggctcaggc acagcacccg gatcagggtg tggctgttgg gataccaggc gatgttgagc
     1141 gatctggccc gcgatctcaa tccggatcgc ccgggtcgat atgagccccg ggtggtcaaa
     1201 cgccgtccca aaccattccc ccgcatgcag cagcctcgac aggtattacg gcagcagctt
     1261 ttgagagcct gatgagctct gagttgagat gaaaggaaga cctgcgattg ttctttggca
     1321 tcaagaggtt gatggcaagt gcccaaatgg acatagtatg tttatgggcg agggggacag
     1381 cttttgccct gattctgata ggatattgat ctaaattcaa tgtttatcag cac
//
LOCUS       DASQSL010000220         1332 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_193193, whole genome shotgun sequence.
ACCESSION   DASQSL010000220 DASQSL010000000
VERSION     DASQSL010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1332
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193193"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            744..1070
                     /locus_tag="VE844_02255"
     CDS             744..1070
                     /locus_tag="VE844_02255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00212.1"
                     /translation="MDTSVEEDADLRVRLELTERAQCTLADERRQALRDFEEERRWRE
                     EAEREREDLRRELEALSEARESPVNLGPTEKERSYPPPAQRLRRSPRAWRRYNRRRLE
                     NTARGG"
     gene            1060..1293
                     /locus_tag="VE844_02260"
     CDS             1060..1293
                     /locus_tag="VE844_02260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5049 domain-containing protein"
                     /protein_id="HZC00213.1"
                     /translation="MVVKNVWEVKERGPVWLPKDVLEELESVHRYTPAEVLDIPTLRY
                     MAMETGKPALVVWIDKHPQEYGQGLLEGFRAEY"
BASE COUNT          314 a          349 c          422 g          247 t
ORIGIN      
        1 cctgtgacga gcgctacttt gccttcgagc atgtctctcc cttcggccag cttgaaaggt
       61 ttcaagcttc aggttacagg cttcaggttc aactttttgg ccggaacagt ggcccgcgaa
      121 cgcagttttc ggttcattcg gcaaggcgtg tgacagaagg aagcccataa tcctagctga
      181 tacccgaagc ctataacctg atacctctct tactgaaaat tttcgctggg aggctttctg
      241 accaacagac cgctggccct acgctgtagc actttgctga ccaagggtag cgacgagcag
      301 ctagaattgg tgaaagctta aggagaaagt aggcacggag cgacctgcgc cgccgaaact
      361 tggtgcccgc gccacagtaa gacgacaact ctaatagagc tacatggttg tgctagaggc
      421 agacggctaa aatctagcct agaaagtaca ggcttgggag gagctcttct cttaccggga
      481 tgctctcatc ttgtcggccg gcacgaacac ggccctacgg tacggggcgg ccccgaatgc
      541 aaggtgaaga aggctgtcgc cgaagtgggc tttggctcga cgtgctctgg ccgcgctgca
      601 aaaaagggag gttgggaaaa gcgtgtaact ccccggtggt ctaacatgtc aacatgggag
      661 agtacagcac gcgcggacac tcgtggcctg ctgcggacag gtcctgggag tcgggttgca
      721 gcacaacaga ggtggccgca aggttggata caagtgtgga ggaggacgcg gatctgcgag
      781 tgcgcctcga gctgaccgag cgggcgcaat gcactctcgc ggacgaaagg cgacaggcgt
      841 tgcgggattt cgaagaggag cgccggtggc gggaagaggc cgaacgagag cgcgaggacc
      901 tgcgccgcga gctggaggcg ctcagtgagg cgcgagaatc ccccgtgaat ctcggcccta
      961 ccgagaaaga gagatcctat ccgccacccg cgcagaggct caggcgctca cccagagcct
     1021 ggagacgcta caatcgccgc cgtctggaga atactgcccg tggtggttaa gaatgtttgg
     1081 gaggtgaaag agcgaggtcc agtgtggctc ccaaaagatg tgctcgagga attggaatcc
     1141 gtgcatcgct acacccccgc cgaagtcttg gatataccga ctctacgcta catggcgatg
     1201 gagacgggaa agcccgccct agttgtgtgg atagacaagc acccacaaga gtatggccag
     1261 gggttactcg agggtttccg ggcggagtac taggaggctc gcagtacccc taacgaaaaa
     1321 aactcgatgt aa
//
LOCUS       DASQSL010000221         1421 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_15933, whole genome shotgun sequence.
ACCESSION   DASQSL010000221 DASQSL010000000
VERSION     DASQSL010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1421
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15933"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..266)
                     /locus_tag="VE844_02265"
     CDS             complement(<1..266)
                     /locus_tag="VE844_02265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00214.1"
                     /translation="MRNSQPVPWESQRHLANGHLRRIDVDGIQVNRQPYALLLPRDLT
                     KQHAPSHEVQIQRRRAGLHIIPDALKAEVDAYLTWCTKPYAIDRP"
     gene            348..782
                     /locus_tag="VE844_02270"
     CDS             348..782
                     /locus_tag="VE844_02270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00215.1"
                     /translation="MSTRAKHAVTTPIPVQLSAPEFHKFILPHLSRPKRGPTCKLGYH
                     CLFNLILWVLYTGMQWQCLPIPKDPQGKPALHYTNVYRAFAKWSDDGSLQQAFMASVA
                     HLAEEKHLDLRVLHGDGSNTVAKKGATGLATRAISTRRARRS"
     gene            737..1219
                     /locus_tag="VE844_02275"
     CDS             737..1219
                     /locus_tag="VE844_02275"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00216.1"
                     /translation="MGYSGYKHQKGEKVIAITDNNGYVLAPLPVAPVNETDMILLPQG
                     LKAVTQVAKQVELDLRGAYLNLDGGFDSTHNRKCIFNAGLIPNIPENRRNRKRTKRGR
                     KRLFNAAIQALRVQVERTFAWEDKFKRLLLRFERIQQRHYGMKLLAYVLINLRAFCGV
                     "
BASE COUNT          316 a          383 c          412 g          310 t
ORIGIN      
        1 gggcgatcga tggcataggg cttggtgcac cacgtcaggt aggcgtccac ctctgccttg
       61 agcgcatccg ggatgatgtg caagccggcg cgccgacgct gaatttgcac ctcatggcta
      121 ggcgcatgct gcttggtcaa atcgcgcggg aggaggaggg cgtagggttg ccggtttact
      181 tgtatcccgt cgacatctat ccgtctgagg tgtccattgg ccaggtgccg ctgactttcc
      241 cacggaactg gttgcgagtt tcgcacattg gcctatgcta ttgtcgtgtt tggagaaacc
      301 tgattcagga ggtagagtcc acacgcggca cacgaggcca ataaaccatg agcacacgcg
      361 caaaacacgc ggtaaccacg ccgattcccg tccaactctc cgcaccggag ttccataaat
      421 ttatcttgcc gcacctctcg aggcccaagc ggggtccgac gtgcaaactg ggctatcatt
      481 gcctctttaa ccttattttg tgggtgctct atacggggat gcagtggcag tgcttgccga
      541 tacccaaaga cccccagggc aagccggcac tgcactacac caatgtctac agagcctttg
      601 ccaagtggtc agacgatggt tcactccagc aggcgttcat ggccagcgtg gcccatctcg
      661 cagaggagaa gcaccttgac ctccgtgtac tccatggcga cgggagcaat accgtggcca
      721 aaaaaggggc gacgggattg gctactcggg ctataagcac cagaagggcg agaaggtcat
      781 agcgataacg gacaacaatg gctatgtgtt agctcccctg ccggttgctc ccgtcaatga
      841 gacggacatg atcctgttgc cgcagggtct gaaagcagtg acgcaggtgg ccaaacaggt
      901 cgagttggac ctcagaggcg cctatctcaa cctcgatggt ggctttgatt cgacgcacaa
      961 tcgtaagtgc attttcaatg cgggcctgat ccccaacatt ccagagaacc gccggaaccg
     1021 caagcgtacc aagcgaggtc gcaaacgctt gtttaatgcc gccatccagg ccttacgagt
     1081 ccaggtcgag cggacctttg cgtgggagga caaattcaag cggctgttgc ttcgttttga
     1141 acgcatccag cagcggcatt atgggatgaa gttgttagca tatgtgttga tcaacctgcg
     1201 agcgttctgc ggtgtctaaa actcgcaacc agttaatggt gatggtacgg tttgcgcgtg
     1261 tctgtgtgga tgctttcccc atgtgtcacc cccaaggcat caggtctcgt cagctgatga
     1321 gacacgatgg ggataacgcg ttgcaatctc aaaacaatcg tgaagggctc agggcgttac
     1381 cacgaaatgc gatggaatgt gacatttcga cgcgcggcgt t
//
LOCUS       DASQSL010000222         1474 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_165825, whole genome shotgun sequence.
ACCESSION   DASQSL010000222 DASQSL010000000
VERSION     DASQSL010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1474)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1474)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1474
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165825"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(91..561)
                     /locus_tag="VE844_02280"
     CDS             complement(91..561)
                     /locus_tag="VE844_02280"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014756203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HZC00217.1"
                     /translation="MPGDEQDKAGVVAPPPLIYLAALVFGLLLNRRSPTTFLPRTIAR
                     LLGWPLLGGGVLLAGWFEWAMRRADTPTNPYKPVSHIATEGPFRYTRNPAYLSMTMMY
                     AGIASLANALWAIILLPVALLVIQRGVIEREERYLERKFGEEYLSYKARVRRWI"
     gene            complement(778..1233)
                     /locus_tag="VE844_02285"
     CDS             complement(778..1233)
                     /locus_tag="VE844_02285"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015163096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HZC00218.1"
                     /translation="MSANLGPVRPPLVYLGSILLGLLLHFAWPLPLVRHPVGALIGAG
                     VVLMAVGLFITAVRTFRAASTPVPGNRPTTTIVRTGPYRFSRNPIYLAFSALQVGIAL
                     WVGSLWLLITLVPALALMSFWVIPREERYLEARFSSEYLSYKSSVRRWL"
BASE COUNT          343 a          436 c          433 g          262 t
ORIGIN      
        1 tattcctact atgatgccac caccttcagc ctggcgcgaa cttccgagaa cgctccttct
       61 acgaggttgg gtgaatagag gtctaaccgc ttagatccaa cgcctcactc gtgctttata
      121 gctcaggtac tcttcaccga acttgcgctc caaatagcgc tcctctcgct cgatgacgcc
      181 acgctggatc accagtagcg ctaccggcag aagaatgatg gcccacaacg cgttcgcgag
      241 gctggcgatg cccgcataca tcatcgtcat cgaaagataa gcggggttgc gggtgtaacg
      301 aaacggtccc tccgtggcaa tgtgagagac cggcttgtag gggttagtcg gtgtatcggc
      361 acgtcgcatc gcccattcga accagcccgc gagcagcact cctccgccaa gaagcggcca
      421 cccgaggagt cgcgctatcg tgcgcggcag aaaggtagtc ggagaccttc tgttgaggag
      481 caggccaaaa accaaggctg ccaggtagat aagaggcgga ggcgcgacga cccctgcctt
      541 gtcttgctcg tcgccgggca tatgctctca ccctcctcag caggtctacc ccggttggct
      601 aactttagag catgatgcca tttaccgaag cctgctgcga acttcggaga attccacttc
      661 tacgagcttc ggtgaataaa ggagaatggc tccttaggta ggaggtggag aggcctcctt
      721 cagacctctc cgccagagcc ggtcgatctc attctctgat gaacgccagc aagccgccta
      781 caaccaccgg cgcaccgagg acttgtagga caggtactcg gaggagaatc gtgcttcaag
      841 gtagcgctcc tctctgggga tgacccagaa ggacatgagc gccaacgctg gaacgagtgt
      901 gatgagcaac cacaggctgc ccacccagag agcgatgcct acctggagag ccgagaacgc
      961 cagatagatt gggttgcggc tgaagcggta gggcccggtc cgtacgatgg tggtggtcgg
     1021 ccgattgccg ggcacgggtg tgctcgcggc gcgaaacgtg cgaaccgcgg tgatgaacaa
     1081 gccaacagcc atgagaacca cacccgcccc gatcagcgca ccgaccggat gccgcaccag
     1141 cggcagcggc caagcgaagt gaagcagtag accaagaaga atcgacccca ggtagaccag
     1201 cgggggacgc acaggcccga ggtttgcgct catttagggg atagtagatc agcggggaag
     1261 gcagggcaaa tagtagctcc tcagtttccg agaagccctt attcccggta atttccgcaa
     1321 agcacaagtc tgggcaactc gataagcagg gcacgatcgc ctaaccgcta aaccagcgtc
     1381 agctccactt cggaggctcc ctcgcccaag acggcgctga acctcacggc cggagggtgt
     1441 gtattagtga cagaattcat cgagactcag cccc
//
LOCUS       DASQSL010000223         1773 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_15959, whole genome shotgun sequence.
ACCESSION   DASQSL010000223 DASQSL010000000
VERSION     DASQSL010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1773
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15959"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..186)
                     /locus_tag="VE844_02290"
     CDS             complement(<1..186)
                     /locus_tag="VE844_02290"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009725842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HZC00219.1"
                     /translation="MRVYIGLGSNLNDPKRQVRKALEALTGLPGSTLCRYSSLYRSPP
                     MGPQDQPDYINAVAELET"
     gene            complement(202..1500)
                     /gene="pcnB"
                     /locus_tag="VE844_02295"
     CDS             complement(202..1500)
                     /gene="pcnB"
                     /locus_tag="VE844_02295"
                     /EC_number="2.7.7.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014776691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:1990817 - poly(A) RNA polymerase activity
                     [Evidence IEA];
                     GO_process: GO:0006378 - mRNA polyadenylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HZC00220.1"
                     /translation="MPQGDAYSSKLIRFKITPRIILRSEHIISRANIDERALKVLYRL
                     KNAGYKAYLVGGSVRDLLLGREPKDFDVATDALPEQIRELFRNCRLIGRRFRLAHIHF
                     GNKVVEVATFRAQHADGEGDRVVEKGRIVRDNVYGDIDEDVWRRDFTVNALYYNIEDF
                     TVVDYVGGLEDIHAGRLRLIGDPASRFHEDPVRLLRAVRFAVKLGFTIHADTEGPMFE
                     LGYLLENIPPARLFEELLKLFMGGCAVQTFERLRHYGLFGYLFPQAEAALSEEEEGFP
                     HLLLVRALENTDGRIAQDKPVTPSFLFAALLWDPMRRLVDHYQANGLSAMEALQLAAD
                     TVISRQVARIAMPRRFTQVTREIWALQPRFDQRGGQRPLRLLAHPRFRAAYDFLLLRA
                     EAAGEKQELADWWTEFQAADPKRRQAMQTALQRSTRRRRK"
     gene            1609..1684
                     /locus_tag="VE844_02300"
     tRNA            1609..1684
                     /locus_tag="VE844_02300"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1643..1645,aa:Glu,seq:ctc)
BASE COUNT          431 a          522 c          463 g          357 t
ORIGIN      
        1 cgtctcaagc tcagccacgg cgttgatgta atcaggctgg tcttgcggtc ccatcggagg
       61 actgcgataa agcgaggaat atcggcatag ggtactaccc ggtaaacccg ttaacgcttc
      121 caaagccttc cgcacctgcc gcttgggatc attgagattg ctgcctagcc cgatatagac
      181 ccgcatttct ataaaatccc atcacttgcg ccggcggcgt gtggaacgct gcagggcagt
      241 ctgcatcgcc tgacgccgtt tgggatccgc cgcttgaaac tcggtccacc agtcggcgag
      301 ttcttgcttt tcccccgctg cctcggcgcg caacagcaag aaatcgtagg ctgcccggaa
      361 cctgggatgg gccagcaaac gcagtggacg ttgcccaccc cgctgatcga acctcggctg
      421 caaggcccag atctcgcggg tgacctgggt aaagcggcgc ggcatcgcaa tcctcgccac
      481 ctggcgagaa ataaccgtat cggcggcaag ttgtagcgcc tccatagccg acaggccatt
      541 ggcctgataa tgatctacca aacgccgcat cggatcccac agcaaggccg caaacagaaa
      601 cgagggagtg accggtttgt cttgcgcgat ccgcccatcg gtattctcga gcgcccgcac
      661 cagtaacagg tggggaaagc cctcctcctc ttcgctcaag gcggcctccg cctgcgggaa
      721 gaggtatcca aacaagccat aatggcgcaa acgctcaaag gtttgtaccg cgcagccgcc
      781 catgaagagc ttcaacagct cttcgaagag ccgggcaggc gggatattct ctagaagata
      841 ccctaactcg aacatgggcc cctcagtatc ggcatggata gtgaagccga gcttaaccgc
      901 aaagcggaca gcccgcagca gccggaccgg atcctcgtgg aaccgggatg ctggatcgcc
      961 gatcagccgt aatcggccag cgtggatatc ctcaagcccc cctacataat ccacgacggt
     1021 gaaatcttca atattgtagt acagggcatt gacggtaaaa tcccggcgcc agacgtcctc
     1081 atcgatatca ccatagacat tatcacggac gatccggccc ttctccacta ctcgatcccc
     1141 ctcgccatcc gcatgttggg cccggaaggt cgccacttca actactttgt taccaaagtg
     1201 gatgtgcgcc aaacgaaacc gtcggccgat caggcgacaa ttgcggaaga gctctctgat
     1261 ctgctcgggg agggcgtctg tggccacatc aaaatccttg ggctcacgcc caagcaagag
     1321 atcgcgcaca ctgccgccga cgagataggc tttatagccg gcatttttaa gtcggtaaag
     1381 taccttcaac gccctctcgt cgatattggc gcgtgagata atatgctccg atcggagtat
     1441 aatacggggc gttatcttga atcttataag cttggaagaa taagcgtcac cctgcggcat
     1501 attaacctta atctatattg agcaagcggt gttggcatgc aactgattga atcggtaatt
     1561 taagcactcc ggcaacgcgt tataataaca tgccatcaaa gatgcagtgc tcccttcgtc
     1621 tagcggccta ggacgtcgcc ctctcacggc gaaaacaggg gttcgattcc cctagggagc
     1681 gccaaaaaat caaagtaggc tatgccgctc accctcaaaa aacaagtcaa atgagttcaa
     1741 tggactcatt ggaattaaac ggaaccagtg ctg
//
LOCUS       DASQSL010000224         1334 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_28420, whole genome shotgun sequence.
ACCESSION   DASQSL010000224 DASQSL010000000
VERSION     DASQSL010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1334
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28420"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1074)
                     /locus_tag="VE844_02305"
     CDS             complement(<1..1074)
                     /locus_tag="VE844_02305"
                     /inference="COORDINATES: protein motif:HMM:NF033564.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
                     /protein_id="HZC00221.1"
                     /translation="MIAQPKPLIEVFAEIPDFRRRQGTRHPLAAIFSLACCAMLCGYR
                     SYSAIAEWGRNYGTGIAHALGFTHQTPCAATLHTVFRHVERNTLEAQLGAWAEGVVAT
                     TPPAPLAGEAAVALDGKTLRGSRKQGAPGVHLLSALSHHLGLTLAQQAVDDKTNEITQ
                     VETVLRQLVLQDRVVTMDALLTQRHVAQTIVDGGGNYVMIVKDNQPQPRADIELVFTL
                     PPADDRQESARTVDIGHGRIEQRNLTTSEALMDYSDWPGLAQVFELGRHVIIKKTGEE
                     RVEVVYGVTSLRPEQATPGRLLDLVRGHWHIENKSHWVRDVTFDEDRSQVRCGNIPQV
                     MAALRNTVIGLLRWAGHTNIAAAC"
BASE COUNT          278 a          403 c          367 g          286 t
ORIGIN      
        1 gcacgccgct gcaatgttgg tatggcccgc ccacctcagc aggccaatca cggtgttgcg
       61 caacgctgcc atgacttggg ggatgttgcc acagcgcacc tgtgagcggt cctcatcaaa
      121 cgttacatcg cggacccaat gcgacttgtt ctcaatgtgc caatgccccc gcaccaagtc
      181 cagcaaacgc ccaggtgtcg cctgctcagg gcgtagactc gtgaccccat agaccacttc
      241 tacccgttcc tcgcccgttt ttttgatgat aacgtgacgc cccaactcaa agacctgtgc
      301 cagaccgggc caatcactgt agtccatcag ggcctcactg gttgtgagat tgcgctgctc
      361 gatgcggcca tggccgatat ccaccgtgcg cgcgctctct tgacggtcgt ccgctggcgg
      421 cagcgtaaag accaactcga tatcggcgcg gggctgtggc tgattgtctt tgacgatcat
      481 gacgtaattg ccacctccgt ccacgatagt ctgggctacg tgccgctgcg tcagcaacgc
      541 atccatggtg accactcgat cttgcagcac caactggcgc agcaccgtct cgacttgcgt
      601 gatctcgttg gtcttatcat ctaccgcctg ttgggccagc gtcaggccca aatggtggga
      661 tagggccgat aacaagtgga ccccaggagc gccttgcttg cgcgagcccc gaagcgtttt
      721 gccatcaagc gcaaccgcag cttcgcctgc caagggggcc ggaggggtag tcgcaacgac
      781 cccctcagcc caggcgccca attgtgcttc caaagtgttg cgctccacgt gccgaaagac
      841 cgtatggagc gtcgccgcgc acggcgtttg atgcgtaaag cccagagcgt gcgcgatccc
      901 agtgccataa ttgcgtcccc attcggcgat ggcactatag ctgcggtagc cacataacat
      961 ggcacaacag gccaaagaga aaatggccgc taagggatgg cgtgtgccct gacggcggcg
     1021 aaagtccggt atctcggcaa agacctcgat gagaggcttc ggctgtgcta tcatgagagt
     1081 ccaccttcac aaagggtttt ggcttatacg gggcgtgccg gggaagcaaa gccccacata
     1141 ggacaaaacc ctttaactca tcttggacct gttgtgcaac cccatgtccg agaactgaat
     1201 gaccctgggg agtcgatgag aggggttgac aaaagctttt ttgagcggta tattcattct
     1261 gcgattcgat gctgtgatcg ccgttgaact caccgtaaca taaatccact ctgatgttcc
     1321 gtttccattt tcct
//
LOCUS       DASQSL010000225         3698 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_165833, whole genome shotgun sequence.
ACCESSION   DASQSL010000225 DASQSL010000000
VERSION     DASQSL010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3698
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165833"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..462)
                     /locus_tag="VE844_02310"
     CDS             complement(<1..462)
                     /locus_tag="VE844_02310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012187538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZC00222.1"
                     /translation="MKIGYARVSTGDQHLELQLEALKQAGCKRIFREKASGAGGRPPE
                     FLRMLDQLREGDTVVVWKLDRLARSTRDLLETLETIREAGAKFQSLSEPWADTTSHGG
                     KLIMTVFAGIAEFERDLTRERTRAGREAAKRGGVRFGRPKKINADQKDLAAR"
     gene            622..3616
                     /locus_tag="VE844_02315"
                     /pseudo
     CDS             622..3616
                     /locus_tag="VE844_02315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003089110.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3 family transposase"
BASE COUNT          754 a         1088 c         1058 g          798 t
ORIGIN      
        1 acgagctgcc aagtcctttt gatcggcatt gatctttttg ggtcgaccaa accgcacgcc
       61 ccctctcttc gccgcttctc gtcctgcgcg ggtacgctcc cgggtcaaat cgcgctcaaa
      121 ctcagcaatg cccgcgaata ccgtcatgat caacttaccc ccgtgcgagg tggtgtcagc
      181 ccacggctcg gagagggact gaaacttggc accggcctct cggatcgtct ccagggtctc
      241 cagcaggtcc cgtgtcgagc gggctaaacg atcgagcttc catacgacta cggtatcgcc
      301 ttctctgagc tgatcgagca tgcggagaaa ctcgggcggt cgcccgcccg cccccgaggc
      361 tttttctcgg aagatccgct tacagcccgc ctgcttgagc gcttcgagct gcagctccaa
      421 gtgctgatcc ccggtcgata cccgcgcgta cccaatcttc atcacggcta tgctttgcct
      481 cattgactct cttgcaaaag atatcgcaaa acagaccact tttgcgagat acttttgcaa
      541 ctgaaagagg caagtcgttt cgccagggga gactggcttg caaaagttag gagttttgca
      601 gcaccgtctt gtacacaccc tatgcctgtt agcttcctca ccgcaacaca aagatcgaac
      661 tacggccgct acgccggcat cccgaccccc gaggaactcg cgcgttattt ccatttggat
      721 gacgcggacc gtgcgctgat tgcgaccaag cgcggagagc ataatcgtct tggatttgcg
      781 ctgcaactgg cgactgtgcg gtttcttgga acctttctcg acgatctcac gaccctcccg
      841 gaggttgtga tccacaccgt gtcaaagcaa ctggacatta atgatcggaa cgcattgtct
      901 gcctacgatg ataaccggca acggtgggca catacgaccg agatccgcac ccgctttggt
      961 taccgagagt tcgttgaccc gagcgtgggg tttcgcttga cgcgttggct ttacgcgctc
     1021 tgctggacag gcaccgagcg gcccagtgtg ctgttcgatc gtgcaacggc ctggctactc
     1081 gcgaataaaa tcctgctccc cggcgcaagt gtcctagaac gcttcgtcgc acgtctgcgg
     1141 agccgcgtcg aggagcggtt atggcgggtg cttggcagaa tcacgcccga gcagaacgca
     1201 cgcctcaatg agttactcat cgtaccaccc ggcggccgca gttcttggtt agatcgactg
     1261 cgcacgggac ccgtcagagt gaagtgcgcc tgcctttgtg gccgccatca agcgccttca
     1321 aagtgtacgt gacttgggta tatcactgcc gtccgccgcc cacattccgc ccagtcgcat
     1381 cgcaacgctg gcgcgcttcg ctaacacctc gaaggtcacg gcggtggcaa gactaccacg
     1441 cgcccgacgc atcgccacac tcgttgcctt cgtgcatacc ttggaggcaa cggctcaaga
     1501 cgactcgttg gaggtgctcg aaatcttgtt gaacgacttg ttcgatgagg cgaaaaaggc
     1561 tgaccgaaag gcgcggctgc ggactctgaa agatctcgac gccgctgcaa ctaccttggc
     1621 acacgcctgc actgtccttt tagacgagag taaaccggac cctgaagtcc gcgagagcat
     1681 cttcgctcaa attccaaagc tggtacttgc ccaagcgcta gacgatgtgc gcagcttggt
     1741 gcgcccgcct caagatgtgt tctatcgaga actgcaagcg cgctatcgtc gggttcgtcg
     1801 ttttctgccc gccctattga cccacattcg ttttggtgca agccctgcag ggaaggctgt
     1861 tgtcgaggcg ctgaactatc ttcacacggt ggagaaagca cccaaagaag agcctgccgc
     1921 accgctcacg gtggtcagca aggcctggca gcggcatgtc gtaaaggata atggccaagt
     1981 cgatcgccgc gcgtatacat tctgtacgct cgatgagctg cgcacggcct tgcaccgtcg
     2041 tgagatctat gtcagcccca gttggcgcta tgccgatccg cgcatcggtt tgctgacggg
     2101 ccaggagtgg gagagcatac ggccgatgat gtgccgaaca ctggggctga cacccgatcc
     2161 gcaaccggta ctcaaagcac tggccgagga acttgatgga gcctatcgcg cggtggcggc
     2221 acgcttaccg cagaatcccg ctgtgcgtat cgagaaggtc agtgggaagg acgacttgat
     2281 cctcacagcg cttgatagaa tcgaggatcc ctcctccttg gtggcactgc gtacggaagt
     2341 atcggcgcgt ctgccacggg ttgacttgcc ggagatcctg ctcgagatcg ccgcgcgtac
     2401 cggctgcacg gacgcgttta cacatgtcag cgaacgcgcg gcacgggtca ccgatttgag
     2461 gaccagctta tgcgcggtcc tactggcagg tgcctgtaat accggtctcg aacccttggt
     2521 gcgccaagac atgccttccc tgcgccgcga tcggctcacc tgggttaatc agaactatat
     2581 tcgtgacgaa acactgctcg cggctaatgc ccgacttgtc gcggcacaga atcaaatcgc
     2641 gttagcgcat acctggggtg gtggagaggt agcctcggcg gacggcttac gcttcgtggt
     2701 accggtgcgc accgtccatg caggacccaa cccgaagtat ttcggcatcg gccgaggggt
     2761 gacctggtac aacttgatgt ccaatcagtt cacgggtttg cacgggatca ctgtagcggg
     2821 aacgttacgc gatagtctgg tgctgctcgc cgtcgtactt gaacagcaga ctgagctgca
     2881 gccaacccag atcatgacgg acacgggcgc ttactctgac atcgtgtttg gactgttcag
     2941 gctgctcggc tatcgattca gtccgcgact cgccgatata ggtgggacgc gattttggcg
     3001 tattgatgcc aatgccgatt acggtcaact caacggtatt gcgcggcagc gcgtgaacct
     3061 taatttgccc gctcgacatt gggatgacat gttgcgcttg gcgggctcac ttaaattggg
     3121 tcgagtgcgt gccaccggga tcatgcgtac tttgcagata ggagatcggc caacccgctt
     3181 agcgcaagcc attggcgagt tcgggcgtat cgaaaagacc ttgcatacgt tgggttttat
     3241 cgacgacgaa acgaagcgcc ggggtacctt gatccaactg aaccgcggcg aagcaagaca
     3301 tagcctcgcc cgtgtggtct ttcatgctcg gcacggggaa ctgcgacagc ggtatcggga
     3361 aggccaagag gatcaattag gcaccttagg cttggtggtt aacatcattg tgctttggaa
     3421 cacgatctat atggaggctg ctttggatcg gcttcgcagg gaaggctatc ccgtgcggga
     3481 ccaggatgtg gcacacctct cacccctgat ctacgaccac atcaacgtgc tcgggcgtta
     3541 ttcctttgcc gtgccggagt cggtagcgag gggcgaactg cggccgttgc gaaacccagc
     3601 agacgatgat gcttaactga cttcactgtt ccgttgctcc ccataggcca gattttatta
     3661 gacgtcgagt ccccttcaca accaaagatg gtgtaagc
//
LOCUS       DASQSL010000226         1085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_15990, whole genome shotgun sequence.
ACCESSION   DASQSL010000226 DASQSL010000000
VERSION     DASQSL010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15990"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            123..878
                     /locus_tag="VE844_02320"
     CDS             123..878
                     /locus_tag="VE844_02320"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014457234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HZC00223.1"
                     /translation="MGRLDGKVALISGGARGQGATEARMLALEGAKVVFGDVLDEEGK
                     KVEAQIRELGGEATYVHLDVTEESDWRAAVDTAVRTYGKLNVLVNNAGILIRKNLEET
                     TVEDWDRIMDVNAKGVFLGTKASIPAMRAAGGGSIVNISSTAGLVSSPSGSASYTATK
                     GAVRLLTKATAIQYAKEGIRCNSVHPGPIETDMLQDSLSDPAAMELRMQRLPMGRIGK
                     PEEVAYGVIYLASDESSFVTGSELVIDGGTTAQ"
BASE COUNT          260 a          281 c          334 g          210 t
ORIGIN      
        1 ggcgaggtca gcagcatatt cgtttatgac ccgggcagga tcctggtgca gtttgacagt
       61 ggtggtgagg gctagggttg aggtggcatt cctaaggaaa gttaataata ggagctgaca
      121 gcgtgggtag actggatggc aaagttgccc ttattagtgg aggcgcccga ggacaggggg
      181 ccaccgaggc ccggatgcta gccctggaag gcgcaaaagt cgtcttcggg gacgtcctgg
      241 atgaagaggg gaagaaagtg gaagcgcaga ttcgggagtt ggggggcgaa gcaacttacg
      301 tccacctcga tgtaaccgag gagtcggact ggcgagccgc cgtggatacc gcggtaagga
      361 cctacggcaa gctgaacgtg ctggtaaata acgcaggcat cctcatccgc aaaaaccttg
      421 aagagaccac cgtagaggac tgggaccgga taatggacgt caacgccaag ggcgtgtttc
      481 taggcaccaa agcatccatc ccggcaatgc gagcagccgg cggtgggtct atcgtcaaca
      541 tttcctcaac agcgggtctg gtcagcagtc ccagcggttc tgccagctac accgccacca
      601 aaggagcggt ccggctctta accaaggcta ccgccattca gtatgcgaag gaaggaatac
      661 ggtgcaactc ggtgcaccct gggccaatag aaaccgacat gctccaggat tccctcagcg
      721 atccggccgc gatggagttg cggatgcaac gtctgccaat ggggcggata ggaaagccgg
      781 aagaagtggc ctacggcgtg atttatctgg cttccgacga gtcttccttc gtgaccggaa
      841 gcgagctagt cattgatggt ggcacaacag cccagtagtg agcgtcggtc atttcacaag
      901 ataccgtggg acagcccccc ttgctccgga catccccaaa gtaccgacca ttacttactc
      961 tcccaagagt gagctatcct ggagccgggc aaacccggcc aatctagttt tgccaggtcc
     1021 cctcctgttc ttcattgtgt agagcgttag cgtagaatgt ctcagaaagg aacctttttg
     1081 agaca
//
LOCUS       DASQSL010000227         1512 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_15999, whole genome shotgun sequence.
ACCESSION   DASQSL010000227 DASQSL010000000
VERSION     DASQSL010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15999"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            158..1162
                     /locus_tag="VE844_02325"
     CDS             158..1162
                     /locus_tag="VE844_02325"
                     /inference="COORDINATES: protein motif:HMM:NF033547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HZC00224.1"
                     /translation="MPPLSHVHQLFSADTCHAYLRALRWKDRSFQCPRCQSHDVRPWG
                     AYHYRPGFKRYWCTGCRRTFNDLTHTLLAQSQRSLPHWILATFLLCLSCSSRRMAREL
                     GVHIRTSYRWCWWLRNAALSYEMDRQLEGTVEADELYHTAGQKGQAQQGGPKPLGRRP
                     RRRRKKREPGRGHYAKDRPAIIAWVSRQGAVVVQAVKDFTVTTVQKAADIAVQAGSRL
                     YTDSASSYRALKGYVHAFVNHTKKEYARGEVHENRAECLFSLLKPYLRVFRGISKCNL
                     PGYLGFFQFLRNVRHRNAFEQAELILQAALDPTIASRARRGEFVTGFDHFDLLQTPIN
                     "
     gene            1288..>1512
                     /locus_tag="VE844_02330"
     CDS             1288..>1512
                     /locus_tag="VE844_02330"
                     /inference="COORDINATES: protein motif:HMM:NF025001.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZC00225.1"
                     /translation="MAYVISVVNQKGGIGKTTTVVNLSAAIARLGYSVLVIDIDPQAN
                     ASATLGLMDPYEVKSTAATVMLDKTDTVAPW"
BASE COUNT          348 a          410 c          421 g          333 t
ORIGIN      
        1 cttttaatgc tctgaccagt agaggctgtt tagaaaggcg tataatgggc gtcgctcaat
       61 ttatcggggt ttgtagtagc gtaaaaactt gagaaagagc tgagaacctc cccatctgtt
      121 tctgcatcga tctcgtgacc acaggagatt ctcagccatg ccgcctctgt cgcatgtaca
      181 ccagctcttc agtgccgaca cctgccacgc ctacctgcgg gccttgcggt ggaaagatcg
      241 gtcgttccaa tgtccccgtt gccagagcca cgacgtccgt ccctggggtg cctaccatta
      301 ccggccaggg ttcaaacgct attggtgcac aggctgtcga cgcaccttca acgacctcac
      361 ccacacgctg ttggcccaga gccagcggtc gctgccgcac tggattctcg ccacttttct
      421 gctgtgtctg tcatgctcat ctcgccgcat ggccagagag ctgggcgtcc atatccgtac
      481 cagctaccgc tggtgctggt ggctgcgcaa tgccgctctg tcctatgaaa tggatcgcca
      541 gttggagggc acggtcgaag cggatgaact ctatcacact gctggccaga aggggcaagc
      601 gcaacaaggt gggccaaaac cgttgggacg ccgaccgcgt cgtcgccgca aaaagcgcga
      661 gcctggccgt ggtcattatg cgaaagaccg accggcgatc atcgcgtggg tgagccgcca
      721 gggggcggtc gtggtacagg ccgtgaagga ttttaccgtc accacggtgc agaaggcggc
      781 cgacatcgcc gtccaagcgg gcagtcggct ctataccgac tcagccagta gctatcgggc
      841 gctgaaagga tatgtccatg cgttcgtcaa tcatacgaag aaggaatatg cacgtgggga
      901 ggtacatgag aatcgggcag agtgcctgtt ttcgttgctc aagccttacc tgcgggtgtt
      961 tcgtggcatc agcaaatgta acctgcctgg gtacctcgga ttctttcaat tcctgcggaa
     1021 cgttcggcac cggaatgcgt tcgagcaggc agagctgatc ttacaggcgg ccttggaccc
     1081 aaccattgcc agcagagcca ggaggggaga gtttgtcaca ggctttgacc acttcgacct
     1141 gctacaaact ccgataaatt gagcgactcc attatgattt cgccagacct cagatctttt
     1201 agcggaaatt ataagttaca ttatcgacag aacaggatat aattatgggc cgtttaatac
     1261 agaagactta atagaggaga cacacacatg gcctatgtaa ttagcgttgt caaccagaag
     1321 ggaggcatcg gcaaaaccac cactgtggtc aatttgtccg cagcgatagc gcgcctagga
     1381 tattctgtgc tggtgattga tatcgaccca caggcgaatg cctcggctac gctgggactg
     1441 atggacccct atgaggtaaa atcgacagct gcaaccgtta tgttagacaa aacagataca
     1501 gttgctccct gg
//
LOCUS       DASQSL010000228         1033 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_97243, whole genome shotgun sequence.
ACCESSION   DASQSL010000228 DASQSL010000000
VERSION     DASQSL010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97243"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(147..754)
                     /locus_tag="VE844_02335"
                     /pseudo
     CDS             complement(147..754)
                     /locus_tag="VE844_02335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010661793.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
     gene            complement(799..>1033)
                     /locus_tag="VE844_02340"
     CDS             complement(799..>1033)
                     /locus_tag="VE844_02340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00226.1"
                     /translation="LLWKTVEEPNKADLISKLQPVMIASAQLDLMYILSRQCRLLGEL
                     FSGVAQVHADVYQRIPKRLTVPIKVMFIEYENQ"
BASE COUNT          219 a          306 c          265 g          243 t
ORIGIN      
        1 atcataggca gaacgcctat acggcggcct gcacatgacc gagatccacc tggccctgtt
       61 cgggtactga gcagattcgt gtaattttgc acgctaagct attaagtttg tgacgttagg
      121 gcgtttggtg tcctgcaaaa aaaccgctaa cccttcgata gtcggtggcg tttaacaata
      181 tcgcctacgg tgttcttgct gatgttgagt tccttgccga tctctcggta ggacccacct
      241 tcctcaaccc tctgaagcac cttcggcgcc agccggtctg atttaatccg gtggccgaga
      301 tgccggccga accgttttcc ccttgccttg gcagcagcga tccctgagcg gatacgttcg
      361 cgcagtaagt cacgctcgaa ctccgccagg gcggacataa gggaagcgac cagcttgcct
      421 tgcgccgtgc gcaaatcgaa ctgcaggccc gtttgagcga tcagcgatac gccccaggcc
      481 tgcagatcgt tgagcgtatg aaccaggtca attgtgctgc gcccccaacg ggttagctcg
      541 gtgaccacga tcgcctcgat gctccgtgct tgcgctaagg ccatcacctt ctgccgctca
      601 aggcgctcct gcttggcccc tgaggctgtt tctttccaga caccgaccac ctcctggcca
      661 gcacgcgcgg caaatgccag caatcacgtt cttgcctctc gcaggattga tcagcggtcg
      721 agacacggca atacaaggcg actttctgtc ccaattaaac ctcctgggat gaaggggttg
      781 aaaacccgca cggtatcgtc actgattttc gtattctata aacataactt taattgggac
      841 agttaaccgc tttgggatcc tttgataaac gtcagcatga acttgagcta ctcccgagaa
      901 caactcgccc agcaggcggc actgacggct gaggatatac atcagatcca gctgtgccga
      961 cgcgatcata accggctgaa gtttgcttat caggtcggct ttgttcggct cctcaaccgt
     1021 tttccacagc agg
//
LOCUS       DASQSL010000229         1006 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_2097, whole genome shotgun sequence.
ACCESSION   DASQSL010000229 DASQSL010000000
VERSION     DASQSL010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2097"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          224 a          285 c          300 g          197 t
ORIGIN      
        1 cgggagcact ggcgtattac cgacggcctg gacatgatgc agcagttggg ggtaatttcg
       61 atgccggagc acgcgtaagt agctagttgt tagaaatcgc caagctcagc ctttcgagcc
      121 aagctttagt tcacgggtcg cgcttttgta gcctgcgacc tcctctagaa aagctgcaga
      181 tcgtgcacaa atgcccaagc cttggtgtcg ttctgagacc catttacacc agtagtacac
      241 cggcctacat gaacagtggc gaacgagcac gggatgtgtc gcacaggaac ctgccgattt
      301 acaggtatct ttgaacaacg gtgaacgcca ccgtgccgac cagcaactgc acggacctct
      361 agggcgacaa gttgcgagtc aaagtaaccg gttcgttgac acgaaaccgc caagagatat
      421 actagctgta atcctgggga gtagccgtcc gtcttcaggg acggaaggct cggtcgtcat
      481 tacggagctc ttgctcccgg ccggccactc gcgttagccg aacgcgacgg gcgagaccac
      541 catacacagg cttggccgtg gtaggttctc gtgattcccg cggcccgtcc ataagagagg
      601 tggccatgtc gatcgcgctt cccattcgta ggcgccgtcc cgcagcgaat agcggttggg
      661 tctgccgccc gagggaacgg tcatcgagcg cgctcccagt catagtggag ttcgtaacag
      721 cccctgtgac aatccttctc aaccggggtt atcatcctcc tgagcaccat accagtgacg
      781 ttcgtagtga gagcggtctt gggcgtcgtc cgatgggaca agcggaaggg aggcaaggat
      841 gagccgcttc ccgaagaaga tattgctggc aacagacggc tccgagaaca cggcccaggc
      901 gaccaaggcg gcggtcgata tcgccagtag gaggagctcg gagattcatc tgatccacgt
      961 ttggcacgat gtgcacaccc cccacgcaca tggcttcgtg aaggga
//
LOCUS       DASQSL010000230         1022 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_125602, whole genome shotgun sequence.
ACCESSION   DASQSL010000230 DASQSL010000000
VERSION     DASQSL010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125602"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1022
                     /locus_tag="VE844_02345"
     CDS             <1..>1022
                     /locus_tag="VE844_02345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00227.1"
                     /translation="ADRTLKLKERLSTAYELIQSPSSHPLRSIVLQEAARVARSVNPF
                     RVIPTTTPRTLRWTPFLLLALVLALMVDFRGVLPTALVGGDERAHPELLEQGQKMERL
                     GKRLETEARQRGLERSLEAARRLQNLGQRLQHEKVNEREALARVNSLTEYVRNLEDEL
                     RKMSVLEDVSLGKVREVMVNQESVTGEVQRLLGMLSRGKLSAGEMRNLQERMQTLNQQ
                     GGLDDRLGEALSQLREGDLEGAKELLENFLLQDQLAQDFEHLKRAERALDRGFEPSPE
                     MGDEMDLDYPSGEAGEYGDSEMADNTPGESGGLPGDFEGGDYLDAEGTGSNSSVGTGR
                     GVETET"
BASE COUNT          223 a          267 c          344 g          188 t
ORIGIN      
        1 gagccgaccg tacgctgaag ctgaaggaac ggctcagcac cgcctatgaa ctgatccaga
       61 gccccagctc ccatcctctg cgttctattg ttctgcaaga agcggctcgc gtggcccgct
      121 cagtgaaccc ctttcgcgtc atccccacca cgacgccgcg taccctgcgc tggactcctt
      181 ttctactact ggcgctcgtc ttggcgctga tggtggattt caggggcgtc ctaccgacag
      241 ccctggttgg cggggatgaa cgcgcgcacc cagaattgct cgagcagggg caaaagatgg
      301 agcgcctggg aaaacgtctg gagactgagg cgcgacagcg cgggctggag cgcagcctgg
      361 aggctgcccg gcgtctgcaa aatctcgggc aacgcctgca gcatgagaag gttaacgaac
      421 gggaagcgct ggcgcgtgtg aattcattga ccgaatacgt gcggaacctc gaagacgagt
      481 tgcgcaaaat gtcggtcctg gaagatgtga gcctgggtaa ggtgcgtgag gtcatggtga
      541 accaggagag cgtcaccggt gaagtgcagc ggctcttggg catgctctca cgtgggaaat
      601 tatccgctgg agagatgcgc aatcttcagg aacgcatgca aacccttaac caacaggggg
      661 ggctcgatga ccggctcggt gaggccctga gccagttgcg cgagggtgat ctcgaaggcg
      721 ccaaagagct cctggagaat ttccttctgc aagatcagtt agcccaggat ttcgagcatc
      781 tcaagcgggc ggaacgggct cttgaccgag ggttcgagcc gagcccagag atgggcgacg
      841 agatggatct cgactatccc agcggtgagg ctggggagta tggagattct gagatggctg
      901 acaatactcc aggggaaagt ggtgggctcc cgggggattt cgagggcggg gattatctgg
      961 acgctgaggg aactgggtcc aatagctcgg taggaacagg acgaggtgtt gaaaccgaaa
     1021 cc
//
LOCUS       DASQSL010000231         1663 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_2111, whole genome shotgun sequence.
ACCESSION   DASQSL010000231 DASQSL010000000
VERSION     DASQSL010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1663
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2111"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(60..338)
                     /locus_tag="VE844_02350"
     CDS             complement(60..338)
                     /locus_tag="VE844_02350"
                     /inference="COORDINATES: protein motif:HMM:NF016271.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF507 family protein"
                     /protein_id="HZC00228.1"
                     /translation="MSLSRQKINHLSQLIVKALQKAGHVTLLKPENDVRLQIVKTLTD
                     ELRIEEIVDAEVRRKLSSYSRKIIEGNREWDVMYQKFYEQEMKRRLGF"
     gene            complement(382..663)
                     /locus_tag="VE844_02355"
     CDS             complement(382..663)
                     /locus_tag="VE844_02355"
                     /inference="COORDINATES: protein motif:HMM:NF016271.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF507 family protein"
                     /protein_id="HZC00229.1"
                     /translation="MRLRREMIQYLSQAMARDLIDKGFIQVLGERAKVEELLRETITE
                     ELQVEDRLNDEVKDLLRAFSNEFSRGEADYHKMFTMVKRKLAQERGLIL"
     gene            1005..>1663
                     /locus_tag="VE844_02360"
     CDS             1005..>1663
                     /locus_tag="VE844_02360"
                     /inference="COORDINATES: protein motif:HMM:NF013465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HZC00230.1"
                     /translation="MDDAVTNGAGVPQPGGVSGEYVMRGMPMIGVMIAYLWLVLGIGV
                     PAAAGQRTIAIASIFPMADIVQQVGGEHWEVTTLIPPGASAHTYEPTPEQVRRLAQAR
                     VFFQIGLGLEFWLEKLLHATMNAELVRVDLSQAVETLPTPSPEPPSPSRKGTGHGQEQ
                     LHRTPAEGKHDHGHTHQGADVHYWLDPVRMQQVVTHVEQTFAALDPEHARLYAERAQR
                     VR"
BASE COUNT          315 a          502 c          474 g          372 t
ORIGIN      
        1 atttttgcac cccgcagcca gttcagcgag ggtcttaggg gacgcatcaa gcgtacggct
       61 tagaaaccga gacgcctttt catctcttgc tcgtagaact tctggtacat gacgtcccac
      121 tcacggttgc cttcgatgat cttccgcgaa taagaggaga gcttacgccg gacctctgcg
      181 tcgacgatct cttcgatccg cagctcgtcc gtgagtgttt tgacgatctg caagcgcacg
      241 tcattctccg gctttaggag tgttacgtgc cctgctttct gcaatgcctt tacgatgagc
      301 tgcgagagat ggttgatttt ttggcgactc aggctcatcc ccaaggtccc ggtttggtgt
      361 gcttggtcct cgaagctagg cttagagaat aaggccgcgc tcttgcgcca gtttccgctt
      421 caccatggtg aacattttat ggtaatcggc ttcgcctctg gaaaattcgt tgctgaacgc
      481 ccgtaaaagg tcttttactt cgtcgttcag gcggtcttca acctggagct cttcggtgat
      541 cgtctcccgg aggagttctt ccaccttggc gcgctccccc agcacctgaa tgaacccttt
      601 atcgatcaaa tcccgggcca tggcttggga tagatactgg atcatctcgc gacgcaaacg
      661 catgaacgct atgctccggg gaaaccaccc atactcgcga gcctcacgcc atctttgcgt
      721 gacacccgca cgtgacttgg aggctcgagt gccgccttcc aaatcgagac attgagggtt
      781 taccgtgtac ctgatccatg acctgatctt accacgcagg ccgataagcg tgcaaccgtt
      841 gtttacgact gctccttttc gggtttcata gcgccgcagg tctctcctgc catgtggcaa
      901 ctcagttgca gcattcattg acagggacgc atgcacatga catacttgct gcacacggtc
      961 tgagcgcacg gccacgggtg tctctgcagg tcaggacgcc gttcatggat gacgccgtta
     1021 ccaacggcgc gggggtgccg cagcctgggg gcgtgtcggg agagtacgtc atgcgaggca
     1081 tgccgatgat cggcgtgatg attgcctatc tgtggctggt cctggggatt ggcgtgcccg
     1141 cagccgctgg gcaacgcacg atcgcgatcg cctcgatttt cccgatggct gacatcgtac
     1201 aacaggtcgg cggggagcac tgggaagtga ccaccctgat ccctcctggc gcgagtgcgc
     1261 acacgtatga gccgacccct gagcaagtgc gccgccttgc acaagcgcgc gtgttctttc
     1321 aaatcgggct tgggctggag ttttggctgg agaagctgtt gcacgccacg atgaacgccg
     1381 agctcgtccg tgtcgacctc tctcaggctg tcgaaaccct gccgacgcct tctccagagc
     1441 cgccgtcgcc gtcgcggaaa ggcacaggcc acgggcaaga gcagcttcat cgcaccccag
     1501 cagagggcaa gcacgatcac ggccacacac accagggagc cgatgtccac tactggctcg
     1561 acccggtgcg catgcagcag gtggtgacgc atgttgaaca gacgtttgcc gcactcgatc
     1621 ccgagcacgc ccgcctctat gccgaacggg cgcaacgcgt gcg
//
LOCUS       DASQSL010000232         1172 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_97254, whole genome shotgun sequence.
ACCESSION   DASQSL010000232 DASQSL010000000
VERSION     DASQSL010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1172
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97254"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1066)
                     /locus_tag="VE844_02365"
     CDS             complement(<1..1066)
                     /locus_tag="VE844_02365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009711614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HZC00231.1"
                     /translation="MTEASEERRDQWGSKLGFIMAAIGSAIGLGNIWRYPYVVYDNGG
                     GAFLLPYFIAIATAGIPILVMEYALGNRSRGSAPVAYRGLSQRWEWLGWWQAVVTFLI
                     GTYYMVIIGWVLAYLYYSIGTQWGSDTESFFLGNFVGLSDSFWSVGGIQLKVLVPFVV
                     AWVIVYWLMVRGVSRGIQLSAMVLIPLMALMMLIIVIRGITLPGSGEGLTVLFTPDFG
                     ELLNPQVWIAAYGQVFFSIGVAFSIMIAYASYLPRRSELPNSGFIVALSNSGFEFFAA
                     IGVFSVLGFLAVQQNAQVNEVVGEGVILAFVTFPQIINQLPALNALFGFLFFGALLFA
                     GLTSAVSILEVGVIALRDKFG"
BASE COUNT          287 a          355 c          335 g          195 t
ORIGIN      
        1 agccaaactt atcgcgcagt gctatgacgc cgacctcgag aatcgaaaca gcggaggtca
       61 acccggcgaa cagcagcgcc ccgaagaaca ggaacccgaa gagggcgttc agcgccggaa
      121 gctggtttat gatctgcggg aaggttacga aggccaggat caccccctcg ccgaccacct
      181 cgttcacctg cgcgttctgc tgaacggcca ggaagcccag gacgctgaag acgcctatgg
      241 cagcgaagaa ctcaaagccg ctgttggaga gggccacgat gaagccgctg ttagggagct
      301 ccgagcgtcg aggtagatag ctagcatagg cgatcatgat cgagaaggcg acgcctatgg
      361 agaagaagac ctgtccgtaa gctgctatcc aaacctgcgg gttgaggagc tctccaaagt
      421 caggggtgaa gaggacggtc aaaccctcgc ccgatccggg gagcgttatg ccgcggatca
      481 caatgatgag catcatgagg gccatcaaag ggatgaggac catggcggag agctgtatcc
      541 cccggctgac gccgcgcacc atcagccagt acacgatcac ccacgcgacc acgaagggta
      601 ccaagacctt gagctggatg ccgcccacgc tccagaagct gtcgctgagc ccgacgaaat
      661 tgcccaagaa aaagctctct gtgtccgaac cccactgggt tccgatagag taatagaggt
      721 aggcgagcac ccacccgata atgaccatgt agtaggtgcc gattagaaac gtgacaactg
      781 cctgccacca gccgagccac tcccaccgct gcgagagacc ccggtaggcg accggggccg
      841 accccctgga cctgttaccc agagcgtact ccatgaccag gatgggtatt ccggcagtgg
      901 ctatggctat gaagtaagga aggaggaagg cgccgccgcc gttgtcgtag actacgtaag
      961 ggtagcgcca gatgttgccc agaccgatag ccgagccgat ggccgccatg atgaatccga
     1021 gtttggaacc ccattgatct cgccgctctt cggatgcctc cgtcatagtt ctctcctcct
     1081 agaccactct ccatccacag ccggatcctt tgtcttcact agagcctatc ccctaaaggc
     1141 catgcaccct gcaagctgaa tccctatacc ag
//
LOCUS       DASQSL010000233         1280 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_43065, whole genome shotgun sequence.
ACCESSION   DASQSL010000233 DASQSL010000000
VERSION     DASQSL010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1280
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43065"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            34..1150
                     /locus_tag="VE844_02370"
     CDS             join(34..297,299..1150)
                     /locus_tag="VE844_02370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611616.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZC00232.1"
                     /translation="MATQRRHYRAEFKARVALEALKGHQTINELASRFGVHPSQIGKW
                     KQHLHNELPRLFCADRHHDERDHEALQAELYQQIDQLKVELDWLKKKLATSREAKRAL
                     IEPGHTQLSIARQCDLLGLPRSSYDFKAKAESSENLHLMRLLDEQYTRTPFYGIRRMT
                     AWLRSQGYPVNAKRVARLLHTMGLETIYTRPKLSQPNPTHRIYPYGLRGVAIERVDQV
                     WSTDITFVRLRGGFVYLVAVMDWFSRYVLSWALSITQDVSFCLEALDEALGRGRPEVF
                     NSDQGSQFTSRAFTGRLEAAGITISMDGRGRALDNVFVERLWRTVKYEEVYLNEYETP
                     REATQGLRRYFEFYNAQRLHQSLAYRTPAAVYFGNRG"
BASE COUNT          279 a          354 c          377 g          270 t
ORIGIN      
        1 tgtcccttgg gagtgcaaaa aggagccctc ttgatggcga cacaacgcag acattaccgt
       61 gcagaattca aagcccgagt ggccctcgag gcgctcaaag gtcaccagac gatcaatgaa
      121 ctcgcgagtc gctttggcgt ccatccctcg cagattggca agtggaaaca gcacctccac
      181 aatgagctgc cacggctttt ttgtgccgat cgccaccatg acgagcgcga ccatgaagcc
      241 ctgcaagctg agctctacca acaaattgat cagctcaaag tcgagctcga ctggctgaaa
      301 aaaaaagttg gcgacttctc gtgaggccaa gcgggccttg atcgaaccgg gccacacgca
      361 gctcagcatt gcgcggcagt gcgacctgct cgggctgccg cggtcgagtt acgacttcaa
      421 agcgaaggca gaaagtagcg agaatctgca tctgatgcgc ctgttggacg agcaatacac
      481 gcggacgccg ttttacggta tccgccgcat gaccgcgtgg cttcgctccc agggctaccc
      541 cgtcaatgcg aagcgtgtgg cccggttgct tcacaccatg ggtcttgaga cgatttacac
      601 gcggcccaag ctgagtcagc ccaaccccac gcaccgcatt tatccttacg ggctcagggg
      661 agtggccatc gagcgggtcg atcaggtctg gagcacggac atcacgttcg tgcggctgcg
      721 tggcggcttt gtctacctgg tggcggtgat ggattggttc agtcgctacg tgctttcctg
      781 ggcgctttcg atcacgcagg atgtgagctt ttgcctcgag gccttggacg aagctctggg
      841 gcggggccga cccgaggtat tcaacagtga tcagggttcg cagtttacca gccgcgcctt
      901 caccggacgc ctggaggctg cgggcatcac gatcagcatg gacggccgtg gacgggcatt
      961 ggataacgtg tttgtcgagc ggctttggcg cacggtcaag tatgaggagg tctatttgaa
     1021 cgaatacgag acgcccaggg aggcgacgca agggttgcga cgatactttg agttttacaa
     1081 cgctcagcgt ctccaccagt ctctggccta ccggacaccg gcagcggtgt acttcggtaa
     1141 caggggatga caggacacct taattttctc tcttttttgt ctagacaatg gggtacacct
     1201 caagagtaga aatcatatgc ctatcgtata cgtcaatgat caatcgtgcg tctatgaaat
     1261 cgaaggagac ggctttccgc
//
LOCUS       DASQSL010000234         1059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_153049, whole genome shotgun sequence.
ACCESSION   DASQSL010000234 DASQSL010000000
VERSION     DASQSL010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153049"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            97..899
                     /locus_tag="VE844_02375"
                     /pseudo
     CDS             97..899
                     /locus_tag="VE844_02375"
                     /inference="COORDINATES: protein motif:HMM:NF033580.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
BASE COUNT          240 a          282 c          344 g          193 t
ORIGIN      
        1 cagagccaag cagggtgtgt gatgctaggg cgtgtttgca aagggatgag gggaggctat
       61 actgtgatcc aagagttggg gtagaggtga ggggatatgg gaagaggcga cttgacagac
      121 cggcagtggt gccaattgga attgctgttg cccccgcaga tcccaaagac tggacggccc
      181 aacaaagacc atcgcatcat tattaatggc atcctttggg tgttgcggac cggagcaccc
      241 tggcgagacc taccccagcg ctatggcccc tggcgcacgg tagccagccg gttctatcgc
      301 tggcgccagg atggtctggg ggatcgtttg ctggcgtcag tacagcagca ctccaacatc
      361 cgagggaagg tgaactggga actccattat gtggatggca ccatggttcg tgcccatcag
      421 cacgcggcag gagccagggg gaaaacccgg aaggcgaggc tttaggccgt agccaaggag
      481 gcttcagcac caaggtacat ctgcgggccg aaggtggggg taaactaatg actctggtgc
      541 tggctccagg ccagcgccat gaggctcccg tgttccccca gttgagggcc caaggttcag
      601 tgaaaggagc caagggcaga cccaggctga ggccgcactg ggtggtagga gacaagggct
      661 acagcagctg ggccatccgc cagtatgccc gccagcatgg aatcaggatt accatcccgc
      721 acaaagtcaa tgagtgtcgg aaaggacctt ttgaccggga ggtctacaag cagcgtaacc
      781 tggtggagcg gctgatcaac cggctgaagc agtttcggcg gctggccacc aggtatgagc
      841 agcgagcagc caactatcgg gcgatgtggg taatagcggc aaccctccta tggttgtagt
      901 ttgcaaacat gccctagtaa ctctgctcgg gataatcatg gtactggcag tggcctgcgg
      961 tggtgctccg gctgcaccag atccgaacac cgcacccgca gccgaaccta ctgctgctcc
     1021 tggagtgggt gaaacatctc aacccactgc tagccctca
//
LOCUS       DASQSL010000235         1719 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_43115, whole genome shotgun sequence.
ACCESSION   DASQSL010000235 DASQSL010000000
VERSION     DASQSL010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1719
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43115"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(297..>1719)
                     /gene="mnmG"
                     /locus_tag="VE844_02380"
     CDS             complement(297..>1719)
                     /gene="mnmG"
                     /locus_tag="VE844_02380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011630613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HZC00233.1"
                     /translation="GGRIHVGETNYQGGRAGDAPANALAQRLRELPFQVGRLKTGTPP
                     RIDGRTIDYSKLERQPGDAPVPVFSFLGEAAEHPPQAPCYITRTNERTHAIIRAALHR
                     SPMYSGRIEGVGPRYCPSVEDKVVRFADKLSHQIFVEPEGLGTSEIYPNGISTSLPFD
                     VQLALVRSIGGFENAHITRPGYAIEYDFFDPRDLKSSLETKCLAGLFFAGQINGTTGY
                     EEAAAQGIIAGINAALAVQGREPWSPRRDEAYIGVLIDDLITRGTNEPYRMFTSRAEY
                     RLMLREDNADLRLTPKGRELGLVDDGRWQTFDAKHKALEAEQARLYSTWLGPNAVADE
                     QAITVLGTPLQREYRLSELLRRPNVGYYGLMSLPGAGPGVADPRVAEQLEIQARYSGY
                     IEHQEEEIARNRRDEDTPLAPDLNYTEVHGLSTEVVQKLSHYRPASLGQAARISGVTP
                     AAISLLRVHLKRRPVALRDSRRI"
BASE COUNT          341 a          522 c          504 g          352 t
ORIGIN      
        1 aagcttggat tatgatcagc cgccttgggc agctcatgaa ctagcccctt tgaggggcta
       61 acagaaataa gcccccggct ttgccggggg tgatttaact tctcaataag ttcgggcaaa
      121 tcatcatttc cccctttgaa aaagcggggt taggggggat ttcaacgatg ctaccctacg
      181 gcaagaatct aaaacacctc gcccgcggac atcctaaagt gctcgagcgt gccaagggcg
      241 cttcactggc acggcttgcc acgacattct cgagggtcgt gacgcgcgct ttatcattat
      301 attcgccggc tgtcccgcag ggccacaggc cggcgcttga gatgcacccg caaaagcgag
      361 atcgccgccg gggtcacccc cgagatccgg gcggcctgcc cgaggcttgc gggccggtag
      421 tgggataact tctgcaccac ttcggtagag aggccatgga cctcggtgta gttcagatcg
      481 ggcgcgagcg gggtgtcttc atcgcgccga ttgcgcgcga tctcctcctc ctgatgctcg
      541 atataaccgc tgtagcgcgc ctggatctca agttgttcgg cgacccttgg atcggccacc
      601 cccggccctg ccccaggcag cgacatcaat ccgtagtaac cgacattggg acggcgtaat
      661 aactccgaga gtcgatattc ccgttgcagg ggcgtaccta atacggtgat agcctgctcg
      721 tccgctaccg cattggggcc cagccaggtg ctgtagagac gcgcctgttc cgcttcaagc
      781 gccttatgtt ttgcatcgaa ggtttgccag cgcccgtcgt ccaccagacc gagttcgcgt
      841 cctttgggag tgagccgcag atccgcattg tcttcacgca acatcaagcg gtattcggcg
      901 cggctcgtga acatccggta aggttcattg gtgccccggg tgatcagatc atcgatcaag
      961 actccgatat aagcctcatc gcggcgtggg ctccagggct ccctgccttg cactgccaag
     1021 gccgcgttga tgcccgcaat gatcccctgg gccgctgcct cttcataacc ggtcgtgcca
     1081 ttgatctgac cggcaaaaaa caaccccgcg agacatttgg tttctagaga agacttcaga
     1141 tcacggggat cgaagaaatc gtattcgatg gcataaccag gccgggtgat atgggcgttt
     1201 tcaaaacccc cgatggaacg cacgagcgcg agttgcacat caaacggtag gctggtcgag
     1261 atcccattgg gataaatctc gcttgtccct aaaccctccg gctccacaaa gatctgatgg
     1321 gagagcttat cggcaaaccg taccaccttg tcctcgaccg aggggcagta gcggggaccc
     1381 accccctcga tccggccact gtacattggc gagcggtgga gggcggcgcg gatgatcgca
     1441 tgggtccgct cattggtgcg ggtgatataa cacggcgctt gcgggggatg ctcggcggcc
     1501 tcccccagaa acgagaacac cggcaccggc gcatcgcccg gctggcgttc gagtttgcta
     1561 tagtcgatag tgcggccatc gatccgggga ggggtgccgg tcttaaggcg acctacctgg
     1621 aacggtagtt cacgcaaccg ctgcgccagg gcgttggccg gcgcatcacc cgcacgtcct
     1681 ccttgatagt tagtctctcc cacatggatc cgcccgccg
//
LOCUS       DASQSL010000236         1018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_56942, whole genome shotgun sequence.
ACCESSION   DASQSL010000236 DASQSL010000000
VERSION     DASQSL010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56942"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            194..>1018
                     /locus_tag="VE844_02385"
     CDS             194..>1018
                     /locus_tag="VE844_02385"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00234.1"
                     /translation="MAEVGLVHFARVALEVAEAVLPDYRTKFSKHIFTQPQLLAVLCL
                     MRYEDWTLRKTEVRLAEHSELRSALGLRKAPDHTTLYRFLRRLDERALVAALNETVRC
                     LPKASVHEQEPVATVAVDATGLAPGAISTFYVRRTHNCGGEPMLWRRWLKWLVVVDTD
                     HRMVLAQEACSGPYNGSAMLRPLVDAAHQITPLGVVLADAEFDSEHNHRHVRDRLAAV
                     SVIPAKRGKATWQLQGYRAKMQAAFPHQLYRRRALVESVFSAVKRKLSTRAPGRSLE"
BASE COUNT          201 a          300 c          316 g          201 t
ORIGIN      
        1 agcggtgcta ggcggatacg gcttgatgaa cgacggcggt gtaagtgccg cgattattgt
       61 gcccggagct tccatatcgc gctatcttgc aagcactgga cctagatgct ggatggctct
      121 gttgacatcc tgaacgacgt ggtcgaccct aacttctgtc aggatgcgtc cgagggccgg
      181 gacggtggac tctatggctg aggtcggtct cgttcatttc gctagggtag cgctagaagt
      241 cgccgaagcc gtcctacccg actaccgtac caagttctcc aagcacatct tcacccagcc
      301 gcagctctta gccgttctgt gccttatgcg ctacgaggac tggacactgc gtaagaccga
      361 ggttcggctg gctgagcaca gcgagttgcg aagcgctttg ggcttacgca aggcgcccga
      421 ccatactacg ctctaccgtt tccttaggcg gctcgacgag cgagccttag tagcggccct
      481 gaatgagacc gtccggtgct tgcctaaggc aagcgtccat gagcaggagc cggtagcaac
      541 cgtggcggtg gatgcaaccg gcctggcacc gggtgcgatc agcaccttct acgtccggcg
      601 cacccacaac tgcggcggtg aacccatgct ctggcgtagg tggcttaagt ggctcgtcgt
      661 ggtcgacact gatcatcgga tggtgctggc acaagaggcc tgctctggtc cctacaatgg
      721 ctcggcgatg ctgcgtccac ttgtggatgc cgcccaccag attactccgc ttggcgtggt
      781 actagcggac gcggagttcg acagcgagca caaccaccgc cacgtgcgcg atcggctcgc
      841 tgcagtgagc gtgataccag ccaagcgagg caaagcgacg tggcagcttc aaggctaccg
      901 ggccaagatg caagccgcct tcccacatca gttgtatcga aggcgggcgc tggtagagag
      961 cgtcttctca gcggtgaaac gcaagctgtc gacaagagca ccaggtcgaa gcctcgaa
//
LOCUS       DASQSL010000237         2147 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_56951, whole genome shotgun sequence.
ACCESSION   DASQSL010000237 DASQSL010000000
VERSION     DASQSL010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2147
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56951"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            76..1119
                     /locus_tag="VE844_02390"
     CDS             76..1119
                     /locus_tag="VE844_02390"
                     /inference="COORDINATES: protein motif:HMM:NF014036.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HZC00235.1"
                     /translation="MDPRGGTTRQICHYTWTSPEGDRLILTDMPGLHETGEALDDISR
                     EEAQRAHVVVYLVEGDLTRDQYAEFQQLLALDKPVILALNKVDRYSNEELTAVRKRLL
                     ERVGDAAEVEVVAVSAGGQREVIKVHPDGREERVVRAIPVQVEALLNALLQRVSRDPA
                     ALENLRDTAVLRLAARKLDVTVAAHRRERAAEIVKQYTHKAIFGALAAVSPGTDVIIQ
                     GYLGIGLIRALCGVYEVSAREVNVTKFLQLASKNVGKTLPLLLTVTGNTLKSFPGIGT
                     VAGGVVHAVGYGLIFESLGRAVAASLDRHGTLANAATLRLFEEDLNDDLEGRARRLAK
                     IVFDQRRKPGNRP"
     gene            1040..>2147
                     /locus_tag="VE844_02395"
     CDS             1040..>2147
                     /locus_tag="VE844_02395"
                     /inference="COORDINATES: protein motif:HMM:NF012239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Era-like GTP-binding protein"
                     /protein_id="HZC00236.1"
                     /translation="MTIWKDVLDALPKLFSTKDANQATAPDPPEGTSGLSHLQRARES
                     LREWLEDPKVKEVLGALPKWFSPEEPAETVAVGPVETASGSPVELARESLRGLLDDAE
                     IPGAVRKALAKDFAEVQAMLEKLEHGHLHIAVFGRVSVGKSALANALLGEKRFSTSPL
                     HGETTETQSAAWTAWDAGGVFLIDTPGINEIKGEARERLAHTVVSRSDLVLFVVDGDI
                     SATEMSALRQIVEENRPVIVVLNKADRYTQADRALLLQSLKDRTQGLIPEDRIVIAAA
                     DPAERIYVQMDGSGQELETTQRPPSQTGQLRETLWTLLEAEGKVLSALNATLFAGRLS
                     DAINQRVIALKKDLANALIRNYCMAKGILVGVNPV"
BASE COUNT          439 a          600 c          673 g          435 t
ORIGIN      
        1 tgtagcgcta tttggcgata tcagtgccgg taaaacctcg ttgatcaagg ccctgctccc
       61 agctgcgagg cagctatcga cccgcgtggc ggcaccaccc ggcagatctg ccactatacc
      121 tggacaagtc ccgaagggga ccggttgatc ttgaccgata tgccgggtct ccatgaaacg
      181 ggagaggcac tggatgacat aagccgcgag gaagcgcagc gggctcatgt cgtcgtttac
      241 ttggtggagg gtgatctgac ccgtgatcag tatgctgaat tccaacagct gctcgccctc
      301 gacaaacccg tgatcctggc gcttaacaaa gtagatcgtt acagtaatga ggagttgacc
      361 gcggtgcgca agcgcctttt ggaacgcgta ggcgatgccg ccgaagtaga ggtcgtagcc
      421 gtgtctgcag gcggccaacg ggaggtgatc aaggtgcatc cggatggccg cgaggaacgg
      481 gtcgtccgag ccatccccgt gcaggtcgaa gctttgctca acgccctgct gcagcgtgtg
      541 agccgtgatc ccgccgcctt ggagaatcta cgcgatacgg cagtgctccg gctggccgcc
      601 cgcaagctcg acgtgaccgt ggcggctcat cgccgcgaac gggctgctga gattgtcaaa
      661 caatataccc ataaagcgat ctttggtgcg cttgcggcgg tgagtccagg caccgacgtg
      721 attatccagg gctacctcgg gatcggtctg atccgggcgc tttgtggggt ttatgaggta
      781 tccgcgcggg aggtcaatgt taccaagttt ttgcagttgg cctcgaagaa tgtgggcaaa
      841 accctgcctt tattattgac agtcaccggc aatacgctta agtccttccc cgggataggc
      901 actgtagccg ggggagtcgt gcatgccgtg ggctatggtc tcatcttcga gagcttgggc
      961 cgggccgtgg ccgcgagtct ggaccggcac ggcacgctgg cgaatgctgc taccttacgt
     1021 ttgtttgagg aggatctgaa tgacgatctg gaaggacgtg ctcgacgcct tgccaaaatt
     1081 gttttcgacc aaagacgcaa accaggcaac cgcccctgat ccccccgagg ggacaagcgg
     1141 tctctcacac ctgcaacggg cccgtgaaag cctgcgtgaa tggctggaag atcctaaggt
     1201 gaaagaggtg ctgggcgcct tgccgaaatg gttttcccct gaagagccgg ctgaaacggt
     1261 agccgtcggg ccggtggaga ctgccagcgg ctcgccggtg gagcttgccc gcgagagctt
     1321 gcgcggtctt ctcgatgatg ccgaaatacc cggtgctgtg cgcaaggcgc tggccaagga
     1381 cttcgcggag gtccaggcga tgctggaaaa actcgagcat ggccatctcc atatcgctgt
     1441 attcggccgg gtcagcgtgg gcaaatctgc cctggccaat gccctgctcg gtgagaaacg
     1501 cttctccacg agcccccttc atggcgagac taccgagacc caatccgctg cctggacggc
     1561 ctgggatgca gggggcgtat ttttgatcga taccccaggc atcaatgaga tcaagggaga
     1621 ggcacgtgag cgtctggccc ataccgtcgt cagtcgctcc gatctagtcc tgtttgtggt
     1681 ggatggcgat atctcagcga ccgagatgtc ggcgctgcgg cagatcgttg aagaaaaccg
     1741 cccggttatc gtggtgttga acaaagcgga tcgctacacc caggcggatc gggctttact
     1801 cctgcaaagc ctcaaagacc gcacgcaggg tctgatcccc gaagatcgaa tcgtcatcgc
     1861 agccgcggac cccgctgaac gtatctatgt ccaaatggat ggatctggac aggagcttga
     1921 aaccacgcag cggccgccat ctcaaaccgg gcaattgcgc gagacgctgt ggacgctcct
     1981 cgaagcggag ggcaaggtgc tgtctgcgct caatgctacg ctgtttgcag gtaggctctc
     2041 ggatgccatc aatcaacggg tgatcgccct gaagaaagac ttggccaatg ccctgatccg
     2101 gaattattgt atggccaagg gtatcctggt cggtgtcaat ccggtgc
//
LOCUS       DASQSL010000238         1885 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_43141, whole genome shotgun sequence.
ACCESSION   DASQSL010000238 DASQSL010000000
VERSION     DASQSL010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1885)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1885)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1885
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43141"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..673
                     /locus_tag="VE844_02400"
     CDS             <1..673
                     /locus_tag="VE844_02400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015743019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HZC00237.1"
                     /translation="RSRPEQILLVGAHYDSVRGSPGANDNGSGVAALLELGRFFTDVE
                     QPEITVRLVAFVNEEPPFFMWRHMGSLVYARAARKRGDRIRLMISLEMLGYYSSKPGS
                     QLYPPLFRFFYPDRAEFIAFVSNLRSRGLMHRVAQVFRTHSDFPLEHTTSVALVRGVA
                     ASDHFSFWRQGYPAFMVTDTAYYRYPYYHTAFDTPDKLCYQPFASLTYGLCQTFNSLA
                     SGALD"
     gene            737..1750
                     /gene="sohB"
                     /locus_tag="VE844_02405"
     CDS             737..1750
                     /gene="sohB"
                     /locus_tag="VE844_02405"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF008745.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HZC00238.1"
                     /translation="MDFISEYGMFLAKLVTVVVFLLVSFAGVNLIFSRGRSRRREEHL
                     EIRHLNRKFEDMALSLKSAILPQREFKHALKRLKDQHKQDEKTGGGSRAGQARKKRVF
                     VLKFKGDILASAVAELREEITAVLLVATPEDEVVVLLESAGGIVHSYGLAASQLLRIR
                     QKNITLTVAVDRVAASGGYMMACVADRIIAAPFAIVGSIGVVAQLPNFNRLLKNHDID
                     YELITAGEYKRTLTMFGEITEKGRAKFREEIEDLYALFKDFIRDNRSQIDIDRIATGE
                     YWHGVRALELKLVDELRTSDDYLQAASETADLYEVSYRRRRSPLERLTSPFASIRPKA
                     WRS"
BASE COUNT          406 a          512 c          537 g          430 t
ORIGIN      
        1 ccgtagccgc cccgagcaga tcctcctggt gggtgcgcac tacgacagcg tccggggtag
       61 ccccggggcc aatgataatg ggagcggggt cgcagccttg ttagagctcg gccgattttt
      121 caccgacgtg gagcagcccg agatcaccgt tcgcttggta gcctttgtca acgaagagcc
      181 accgtttttt atgtggcggc acatgggcag cctggtttat gcccgcgcag cccgcaagcg
      241 cggcgatcgg atccggctca tgatctcgct tgagatgttg ggctactaca gtagcaagcc
      301 gggcagtcaa ctctatcctc cgctgttccg atttttctat cccgatcggg ctgaatttat
      361 cgcttttgtt tccaacctgc gttcccgggg gctcatgcac cgggtggcgc aggtgtttcg
      421 tacccattcg gattttcccc ttgagcatac gacctcggtg gctctggtcc gtggtgtggc
      481 cgcaagcgac catttctctt tctggcggca aggctatccc gctttcatgg tcacagatac
      541 cgcctactat cgatatccgt actatcacac ggcttttgac acacccgata aactctgcta
      601 tcaacccttt gccagtttga cctacggcct ttgtcagacc tttaactctt tagcctcagg
      661 agcgctcgat tgatcggcgt ccccatcgag tgtatgtccc ggcgtgatac tatgggcagg
      721 atagattaat agcgctatgg attttatatc cgagtacgga atgtttctgg ccaagctagt
      781 gaccgtggta gtgtttctgc tcgttagctt cgccggagta aaccttatct tctcacgggg
      841 ccggtcccgc cgccgtgagg aacatttgga gatcaggcac ttgaaccgca agtttgagga
      901 catggcgctc agcctcaaat cggccatctt gcctcaaagg gagttcaagc acgccctcaa
      961 aagactgaaa gaccagcaca agcaggatga aaaaaccggg ggaggttccc gggcagggca
     1021 agcacggaag aaacgggtct ttgtattgaa attcaagggc gatatcttgg cctctgcggt
     1081 ggctgagcta cgcgaggaga tcaccgcggt tttactggtc gccacccccg aggacgaggt
     1141 ggttgtattg ttagaaagtg ctggcggaat agttcatagc tatggcctgg ctgcttccca
     1201 gctcttgcgg atcaggcaaa aaaacatcac cttgaccgtg gcggtcgaca gggtggccgc
     1261 aagcggcggt tatatgatgg cctgcgtggc cgatcgcatc atcgccgccc cttttgcaat
     1321 cgtgggttcg attggcgtgg tcgcccagct gcctaacttt aaccgactat taaagaatca
     1381 cgatatcgac tacgaactga tcacggcggg tgagtacaaa cgtacgctga cgatgttcgg
     1441 tgagatcacc gagaaaggcc gggcaaaatt tcgcgaagag atcgaagacc tctacgcgct
     1501 cttcaaagac ttcatccgag acaaccgcag ccagattgac atcgaccgca tcgccacggg
     1561 cgaatattgg catggtgtcc gggcgcttga attgaagctg gttgatgaac tgcggaccag
     1621 tgacgattat ctgcaggcgg cgagcgaaac agcggatctc tatgaggttt cctaccggcg
     1681 caggcgatcg ccgctggaac ggctcacctc tccatttgcc tctatccgac ccaaggcttg
     1741 gaggagttaa gggaaagcgg gatgggcgag gggatccggt cctacacgag aaaactcgaa
     1801 caagagttca cgaacctgat caacagcctg gatctcagcg atgtgcagag acagtatctg
     1861 agttcccgct ggctcgaaca ggtgc
//
LOCUS       DASQSL010000239         1140 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_97278, whole genome shotgun sequence.
ACCESSION   DASQSL010000239 DASQSL010000000
VERSION     DASQSL010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1140
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97278"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1140
                     /locus_tag="VE844_02410"
     rRNA            <1..>1140
                     /locus_tag="VE844_02410"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          271 a          287 c          364 g          218 t
ORIGIN      
        1 tgacatgagt aacgacaaac agtgtgaaag acactgtcgc cgaaagtcca agggttcctg
       61 cgtaaagtta atctgcgcag ggttagccgg cccctaaggc gaggccgaaa ggcgtagtcg
      121 atgggaacca cgtgaacatt cgtgggcctt gaggtgtgtg acggatgctg gaaattgtct
      181 ctgcttattg gattgcggag gcggtcaagg cgttccagga aacagcccct cagaatagac
      241 cgtaccctaa accgacacag gtggactggt agagcatacc aaggcgcttg agagaactat
      301 gctgaaggaa ctcggcaatt tgcctccgta acttcgggat aaggaggcct tccgcttggg
      361 caaccaggcg ggaggggcac agactagggg gtggcgactg tttaactaaa acacagggct
      421 ctgcgaagtc gcaagacgac gtatagggtc tgacgcctgc ccggtgccgg aaggttaaga
      481 ggaggggtgc aagcctcgaa tcgaagcccc ggtaaacggc ggccgtaact ataacggtcc
      541 taaggtagcg aaattccttg tcgggtaagt tccgacctgc acgaatggcg taacgacctc
      601 cccgctgtct ccagcataga ctcagtgaaa ttgaactccc cgtgaagatg cggggttcct
      661 gcggtcagac ggaaagaccc cgtgcacctt tactgtagct ttgcgctggc attcgtgtcg
      721 gcatgtgtag gataggtggt aggctatgaa gcccgggcgc cagctcgggt ggagccaccc
      781 ttgaaatacc acccttgttg acatggatgt ctaaccgcgg accgtaagcc ggttccggga
      841 cagcgcatgg caggcagttt gactggggcg gtcgcctccc aaagagtaac ggaggcgcac
      901 aaaggtgggc tcagaccggt cggaaatcgg tcgctgagtg caatggcata agcccgcttg
      961 actgcgagac tgacaagtcg agcagagacg aaagtcggtc atagtgatcc ggtggtcccg
     1021 cgtgggtggg ccatcgctca acggataaaa ggtacgccgg ggataacagg ctgatctccc
     1081 ccaagagtcc atatcgacgg ggaggtttgg cacctcgatg tcggctcatc acatcctggg
//
LOCUS       DASQSL010000240         1067 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_16157, whole genome shotgun sequence.
ACCESSION   DASQSL010000240 DASQSL010000000
VERSION     DASQSL010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16157"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(783..>1067)
                     /locus_tag="VE844_02415"
     CDS             complement(783..>1067)
                     /locus_tag="VE844_02415"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HZC00239.1"
                     /translation="EVIISEWTIGPYHREIVLPQPVNGPMTNATYGNGVLALSMPKLG
                     QGAQGSYTEFKLEVVEATRGQRVGHTGSEMQPTTTQEHRQRVEQSGSSRS"
BASE COUNT          233 a          318 c          303 g          213 t
ORIGIN      
        1 tatccacctc agctgttacg ccatcaccca gccgcatagg ctagccaact gatcccatgc
       61 tgtccagcct agcgacaccg agacgcccct tcttcctggc atagcgaggg cgggtagaac
      121 gccgtacggc gagcccgaag ctaacacctc gcacggcctc atacccgccc ttgccagacc
      181 ggaccgaggg aggagctgtt gaaagcgatg cgcaagtttc ataccatcat ccggatgagg
      241 tcgcttttag acccgcctgg atggtcctct gagaccttat cggacgggcg attgaaagca
      301 aatggcggca cacccgctgc gcaaaactgc tatagaagca ggatgcggtg cggggaggcg
      361 tgcgtgtgcg gcctttatga ggctggccgg gccagatgag gttagctatg taggggctta
      421 tacccaccgg gcagaaactt tcctcaccct caaaaaaatg gttatccggg cgcgaataac
      481 ctttcacaat gagaggtcgg ggctatagag cctttcactt tgagaagaag atgctgaaga
      541 ggactacgtc agcaggaagt cgactcggaa cgacctcccc cgtaagtcgc atgaaaggcg
      601 atggacctca cgcccttggc gaggctagga agctcgcagg gcacctcgcg ggagtcattg
      661 gtgcgggggc gcacggcgca gtaaaacact ccgacatacc cttgttgatc cggtagcacc
      721 tcgccaccgg atcaacaggg accttacagg ggaaaatacc ctagacgcag gtgctgtcca
      781 cctcagctac ggctactacc gctttgttcc acgcgctgcc gatgctcttg ggtggtggtc
      841 ggctgcatct ccgaaccggt atggcctaca cgttgcccgc gtgtcgcctc cacaacctct
      901 agtttaaact cggtatagct accttgcgcc ccctgtccca gcttcggcat cgatagggcg
      961 agcacaccgt taccataggt ggcattcgtc atggggccat tcaccggctg gggtaaaacg
     1021 atttcgcgat ggtatggccc gatcgtccat tctgagatta tgacctc
//
LOCUS       DASQSL010000241         1193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_2195, whole genome shotgun sequence.
ACCESSION   DASQSL010000241 DASQSL010000000
VERSION     DASQSL010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2195"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..468)
                     /locus_tag="VE844_02420"
     rRNA            complement(<1..468)
                     /locus_tag="VE844_02420"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            complement(723..>1193)
                     /locus_tag="VE844_02425"
     rRNA            complement(723..>1193)
                     /locus_tag="VE844_02425"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          230 a          386 c          313 g          264 t
ORIGIN      
        1 ccggccgtac tcaggtgcct gctaaggaag gctgtgcgct ttcgtctacg ggactcttac
       61 ctcctgtggt gcggcgttcc agccgcttcg actaacgcac aactttgtaa cttcccgacc
      121 cgccggcaga cggatcaaga cgggtcctac aacacctgcg tgacaacggc tgccgcctat
      181 cacgtcacac aggtttgggc tcttcccttt tcgctcgcca ctactcaggg aatcgaggtt
      241 tctttccttt cctccggtta ctaagatgtt tcagttcacc ggcttgccat cgcgtaccct
      301 atgtattcag gtacggacac gcgcgcatta ccacgcgtag gtttccccat tcggagaccc
      361 cgggatcaaa ggttggtcag cacctccacc gggcttatcg cagccgccca cgtccttcat
      421 cggctcctag cgccaaggca tccaccgtgt gcccttagtt tcttgatcag aaagaacaca
      481 tgtgttgcca ctatggagtt ttcaaggtgc acgcggactc agccgcacag cgagacgacc
      541 agccgtggcc ggtctctcaa aactcaacag cgtggaacgc cgaggtcgac gttcttctag
      601 gcgagctcgg agctcggacg aatgagcaca ccggtgcgag actgaagtca gccaccggac
      661 agatgcaccc aaacatcgac gagccgagca acctaccgga gtaagagctc cggcttccct
      721 agaaaggagg tgatccagcc gcagcttccg ctacggctac cttgttacga cttcacccca
      781 atcatcgacc ctaccttcga cggctccctc ccttgcgggt taggccaccg gcttcgggtg
      841 ttaccggctt ccgtggtgtg acgggcggtg tgtacaaggc ccgagaacgt attcaccgcg
      901 gcgttgctga tccgcgatta ctagcaactc cgccttcatc gaggcgagtt tcagcctcga
      961 atccgaaccg ggaccggttt tttgggattc gctccccctc acgggtttgc agccctttgt
     1021 accggccaat gtagcacgtt tgtagccctg gacgtaaggg gcatgatgac ttgacgtcat
     1081 ccccaccttc ctccggtttg tcaccggcag tctccctaga gtccccggca ttatccgctg
     1141 gcaactaggg acaggggttg cgctcgttgc gggacttaac ccaacatctc acg
//
LOCUS       DASQSL010000242         1049 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_70650, whole genome shotgun sequence.
ACCESSION   DASQSL010000242 DASQSL010000000
VERSION     DASQSL010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70650"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            192..>1049
                     /locus_tag="VE844_02430"
     CDS             192..>1049
                     /locus_tag="VE844_02430"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZC00240.1"
                     /translation="MQKGSHHSISGRMTALELRSALSLGLIFFIRMFGIFMIIPVFPL
                     HAHQLNGATPFLIGVAIGVYGLTQALFQIPFGYLSDRFGRKPVITAGLLVFALGSGVA
                     ALSGNIIGIIIGRSLQGVGAIGAAVMAFAADLIREDQRTKAMALIGISIGVAFAGAFI
                     VGPALDHWLGLKGLFWLTAVLALLAIAILYLQVPHPARISFHRECEPEPTQIIGMIRN
                     PELLRLNVGILLLHLILTASFVVLPVILRDQIGLASVHHWKVYLPVLVFSMLVILPFV
                     RHADRLGRTK"
BASE COUNT          192 a          285 c          280 g          292 t
ORIGIN      
        1 ttcacggatg ccgtcccgcg tggtccaaca cttgatgtcc gcctcgacgg gtaaggctat
       61 agagaacccg aggaggttca agataaataa acagcgctgg ataatagggg tgtttacgta
      121 catacggctt cctctgctat aaaatgataa gattgatacc gacgtcttaa gggttttatg
      181 tgcgttccta aatgcaaaaa ggcagccatc actctatttc cggccggatg acggcccttg
      241 aattacgctc tgccctctcg ctcgggctta tttttttcat tcgtatgttc gggatcttta
      301 tgatcatccc ggtgtttccg ctccatgctc accaactgaa tggcgctaca ccgttcttga
      361 tcggcgtagc gattggcgtg tatggattga cccaggcgct gttccagatc ccgtttggct
      421 atctttccga ccgcttcggc cgtaagcctg tcattaccgc aggtcttttg gtgtttgccc
      481 tgggcagtgg cgtggccgcc ctctcgggga atatcattgg gatcattatc gggcggagcc
      541 tacaaggtgt gggagctatc ggtgctgcag tgatggcctt tgccgccgat ttgattcgcg
      601 aggaccagcg taccaaggcc atggccttga tcggtataag catcggcgtg gcctttgccg
      661 gggcctttat tgttgggccg gctctggatc actggctcgg ccttaaaggg ctgttctggc
      721 tcacggctgt ccttgccctt ttagccatcg ccatccttta tctgcaggtg ccgcatcctg
      781 cgcgcatttc cttccaccgc gagtgcgaac ccgagccgac tcagatcatt ggcatgatca
      841 gaaatcccga attactgcgt ctcaatgtcg ggatcttact tctgcatctg atcctcacgg
      901 cgagcttcgt ggttttaccc gtgatcctgc gcgatcagat cggccttgcg agcgttcatc
      961 actggaaggt gtatctgcct gttttagtat tctctatgct agtgatccta cctttcgtga
     1021 ggcacgccga tcggctaggg cgcaccaaa
//
LOCUS       DASQSL010000243         1249 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_165889, whole genome shotgun sequence.
ACCESSION   DASQSL010000243 DASQSL010000000
VERSION     DASQSL010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1249
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165889"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..241
                     /locus_tag="VE844_02435"
     CDS             <1..241
                     /locus_tag="VE844_02435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00241.1"
                     /translation="VRADFRVSQQRKAANPAQRADLMLRALPRWQSRTIRWRHGTKGW
                     LRKKFVAIRCWRVTSDGQRHVGWLLGERVVFQIWI"
     gene            complement(246..991)
                     /locus_tag="VE844_02440"
                     /pseudo
     CDS             complement(246..991)
                     /locus_tag="VE844_02440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_075985013.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
BASE COUNT          268 a          361 c          346 g          274 t
ORIGIN      
        1 cgtgcgcgct gacttccggg ttagtcagca gcggaaagcg gcaaacccgg cgcagcgggc
       61 cgacctcatg ctgcgggcat tgccccgctg gcagtcgcgg accatccgct ggcgccatgg
      121 gacaaagggc tggctgcgca agaagttcgt ggctatacgc tgctggcgcg tgaccagcga
      181 cgggcaacgg catgtgggct ggctgctggg ggaacgggta gtgtttcaga tatggattta
      241 acagttcaaa ctgacagccc gaattcatag cgattgacaa acagtcctat gacgatgtcg
      301 tgcatctgga tggatttgga aaagcaaatg gtcttgcgcg ctaaacgctt catgcgcgtg
      361 cgcaacgtca gatgcttccg ttcgatttgc tgcgtgttcc gtttgcccgg gtggtggact
      421 tctggcccca gatgtcgcgc gtacgtaccc caataatccg tgtgaaatcg ccggatccca
      481 aacggctcca gcagcgcttt caactgcaga aagacctcat ccgtgcgccg gccaaagaca
      541 tacgccaaga ccgtgccggt ccagtgatcg atggcatgcc agagccaccg ctgctcctgc
      601 ttcttcccca caaagctcca catttcatcg acttcggcgt catcgacccg acgaatgatg
      661 acgtccacgc cgctcgggtg taacgagttg aagaatggct ggttgacgga agttagcgca
      721 ggcccttttt tttcaactcg tgaatgaccg tggtggggct gatgcccaag acacgtgctg
      781 tgtcgcggac cccactgcca ttgaggctca tgtcgatgac ctgttgctta atgtctggaa
      841 gacgcccttt gtatgccgga tccagcagaa aggacgcgcg agagcagtcg ggattttggc
      901 accgatagcg ttgtttcctg gtatcggttt tgccgcgttt caccacccga tcaccttgac
      961 agtagggaca aagaaccggc atgagtacca ttgtattccc ccttcaccat tccccctgca
     1021 gaaggaggca tcagcatggc acacattcca gagaaagtcc agatctgaaa cattaccagg
     1081 aacgccatat cgacagcatg ggtctgcaac cgccccgcca taccgttctc tccaggtccg
     1141 tgttactgag gttcctgagc tgcacatgcc taaccattgg tcagcggccc ttttcccctg
     1201 atagagccat attattgacc ttcaccaaag ttgggttaca gagagcccc
//
LOCUS       DASQSL010000244         1045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_70665, whole genome shotgun sequence.
ACCESSION   DASQSL010000244 DASQSL010000000
VERSION     DASQSL010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70665"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            260..790
                     /locus_tag="VE844_02445"
     CDS             260..790
                     /locus_tag="VE844_02445"
                     /inference="COORDINATES: protein motif:HMM:NF017758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF892 family protein"
                     /protein_id="HZC00242.1"
                     /translation="MTTELKEIYSAERQLTRALPKLQKQVASERLREMLNKRRDQGTA
                     LIEQLDEIFEEMEVSKGRVKNVAAEGLLEDMNQHVEEIKQEKLLDPVLLASLQKVEHY
                     CIAAWGTAASMGRLMGQQTVVKTMEKVLEEGKQFDSELTRLAEQEVNPAMLGEGEEDG
                     EEGDGGKRAGKGNRRK"
BASE COUNT          243 a          265 c          346 g          191 t
ORIGIN      
        1 gttggtgccg tatctccggc cgtcaagcca ggcatgagcg atgtcccgca accgcgcggg
       61 gcgccgccct tctcgcgcgg gcgcagcgga ggcgcattgc ggcgcccggc tgcaagctca
      121 gcggctatga tgctagggag catcctcata tgcctccggc ggattcgaac cttgattaga
      181 gggcgggcgt ttctctcttg gtccgtgact ttaaaacaga ggtttagaca tgccggctcc
      241 gagatcgcct gaagacctgt tgacgaccga gctgaaggag atttacagcg ccgagcggca
      301 gctcacgcga gcgttgccca aattgcagaa gcaggttgcg tccgagcgct tgcgcgagat
      361 gctgaacaag cgacgtgatc aagggactgc gctgatcgag cagctcgacg agattttcga
      421 ggaaatggaa gttagcaagg gtcgtgttaa gaacgtggct gccgaggggc tacttgagga
      481 catgaatcag catgtggagg aaatcaagca ggaaaagctg ctggatccgg tgttattggc
      541 ttcgttgcag aaggtagaac attattgcat tgcggcctgg ggcaccgccg catcgatggg
      601 ccgattgatg ggccagcaaa cggttgtgaa gacgatggag aaagttctcg aagagggaaa
      661 gcagttcgat agcgaactga ccagactcgc cgaacaagaa gtcaaccctg caatgcttgg
      721 cgagggtgag gaggacggcg aagaagggga cgggggcaag cgggcaggaa agggaaaccg
      781 tcgcaaatag caagcaacac ggtttttcag cacgaagaag gcgcgacgga gcggccgcgc
      841 cttactcaat cgcccgtgag ggtggcagta tcggcgcagc cgcgatcgga cctcagcttc
      901 gaccccaata cggatattag gagttatgcg ctgccagtct ggccgccgaa ctctggtgtg
      961 ctacgcttta ccttgcggac accacattag ccacgctcga aatcgattcg aggtgatgct
     1021 gaagcacagg aatctggcgc tgcgc
//
LOCUS       DASQSL010000245         1725 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_2209, whole genome shotgun sequence.
ACCESSION   DASQSL010000245 DASQSL010000000
VERSION     DASQSL010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2209"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..364)
                     /locus_tag="VE844_02450"
     CDS             complement(<1..364)
                     /locus_tag="VE844_02450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00243.1"
                     /translation="MLRVRDLNVNGSLRPGVSQIVEQAPHALVAVGTVATVRTGPAFE
                     VPAPRDLAGLGKALNTRDPLGSIRSVVPRCGHFFLSTQVTSSHLEKSAVEGRYLRKNP
                     VFILQSRLLQLFVAARNQK"
     gene            492..1535
                     /locus_tag="VE844_02455"
     CDS             492..1535
                     /locus_tag="VE844_02455"
                     /inference="COORDINATES: protein motif:HMM:NF013753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00244.1"
                     /translation="MQRPGISGATIVSLCPSPPFRTGSRRRGKKGAARIEGDYLDWAL
                     RDFSGYIAADELYEGPFGVLSIVDNRRFKRILYEVLDHDPTQSDIRQFFKRFKVILES
                     RELRLDGITTDASPLYPKPISEVFGDVAHQICEFHVIAELTKAVLRAVAKVRKAIRAQ
                     IPQVARGRPRAGEAVRRARAKKRLEKKIGDLFEHRYLFVQHRLTRAQTRRLRRISRGQ
                     NGLRTLREIMDEVYRLFDRRCRTHTALEKLAKLRARVRPFKGVGKTLQKLFSPSLEKA
                     LTFLDEKSLPSTSNAVERGNRRHRKMQKTVYRVRALKILKGRVALDMLRDSQAEGRLQ
                     TLKVLHSDRAQCG"
     gene            complement(1605..1725)
                     /locus_tag="VE844_02460"
                     /pseudo
     CDS             complement(1605..1725)
                     /locus_tag="VE844_02460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012636692.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="JAB domain-containing protein"
BASE COUNT          403 a          498 c          458 g          366 t
ORIGIN      
        1 gtttttgatt gcgagccgct acaaataatt gaagaagacg agactgtagt ataaatactg
       61 ggtttttcct caagtagcga ccctcgacag ccgatttctc caggtgagaa gaggttactt
      121 gcgtggagag aaagaaatgg ccgcacctgg ggactaccga gcggatcgaa ccgaggggat
      181 cacgcgtatt gagggccttg ccaagcccag caagatccct aggagccggg acttcaaacg
      241 ccggtcctgt ccggactgtg gccacagtgc ctaccgcgac aagcgcatgg ggcgcctgct
      301 ccacgatttg ggagacccca ggacggagcg acccattgac attcaggtca cgtactctca
      361 gcatttttgc tcccgctgca agaagtattt caacgcggac atgttggatc ttgctctccc
      421 cggaagcagc tacacccata gggtggtctc aactgctgtc cgattggtcg ccgaggacgg
      481 cctttcatac cgtgcagcgt cctggcatct ctggcgcgac catcgtgtcg ttgtgccctt
      541 cgccaccgtt cagaactggg tcgagacgtc gggggaaaaa aggtgcagcg cgtattgaag
      601 gggactatct ggattgggca ctccgtgact tctccgggta cattgccgcc gacgagctgt
      661 acgagggccc cttcggtgtg ctctcgatcg tggacaatcg ccgcttcaag cggatcctgt
      721 acgaagttct tgaccacgac ccgactcaga gcgacattcg acagttcttc aagcgtttca
      781 aggtgatcct ggaaagccgt gagctgaggc ttgatggcat cacgacagac gcatcgcccc
      841 tttatccaaa gccgatttcc gaggtctttg gcgatgtagc gcaccagatt tgcgaattcc
      901 acgtcatcgc ggagttgact aaagctgtct tgagggcagt cgcaaaggta cgcaaggcga
      961 tccgtgccca gatcccccag gtagctcgcg gtcgtccacg agctggcgag gcagtaaggc
     1021 gcgctcgagc gaagaagcgg ctcgagaaaa agatcggcga cctcttcgaa caccgctacc
     1081 tctttgtcca acatcgcttg acgagggcac agacacgacg gcttcgacga atcagccggg
     1141 gtcaaaatgg gctacgcacg ctccgagaga tcatggacga ggtttaccgt ctttttgacc
     1201 gccgctgccg aacccatact gcgcttgaga aactcgccaa gttgcgcgcc cgtgtccgcc
     1261 ctttcaaagg ggtcggcaaa accctccaga agctattctc gccttctctg gaaaaagcgc
     1321 tgacgtttct ggacgaaaaa tccttgcctt ctacttccaa tgccgttgaa cgcggcaacc
     1381 gacgacaccg caagatgcag aagacagttt atcgagtacg agccttgaaa atcctcaagg
     1441 gccgtgtcgc cctcgacatg cttcgcgact ctcaggccga aggccgcctc cagacactga
     1501 aggtgcttca ttcagaccgc gcccagtgcg gatgaacccg gtatttatgc tacagtctct
     1561 tttctttgct atacttccat aatccatcat ctctacgaac aacaaagcga gcgctgtacg
     1621 acgatcctcg gatgaacctg cttaccgtca atcgtgccgt aaaacaactt ctcaaaagca
     1681 agaacacgat gcttattatc cagaaaaacc gctccaaaaa cttcg
//
LOCUS       DASQSL010000246         1098 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_125729, whole genome shotgun sequence.
ACCESSION   DASQSL010000246 DASQSL010000000
VERSION     DASQSL010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125729"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            13..969
                     /gene="miaA"
                     /locus_tag="VE844_02465"
     CDS             13..969
                     /gene="miaA"
                     /locus_tag="VE844_02465"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018717214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HZC00245.1"
                     /translation="MQALSQPLALFLMGPTGVGKTELAAELVARLPGRIISVDSAMIY
                     RGMDIGTAKPGKDLLARAPHRLIDIRDPSETYSAAEFRSDALREMKAITAEGGIPLLV
                     GGTGLYFRTLERGISALPAADPKIRAELETMAKDSGGWPAMHRRLADIDPEAAARIHP
                     HDPQRIQRALEVYAIAGQPLTELIARPTKQPLPYRLAKLIVAPSDRALLHKRLQDRFV
                     AMLERGLVEEVRGLYARGDLHPAMPALRLVGYRQVGQYLEGKIDYPRMLERSISATRQ
                     LAKRQLTWLRAEAHSRWFDGEDPGLLARILRYLNPHLYSQSD"
BASE COUNT          236 a          322 c          319 g          221 t
ORIGIN      
        1 aaggaatagc gggtgcaggc tctctctcaa ccactcgcgt tatttctgat gggaccgacc
       61 ggcgtcggca agacagagct tgcggccgag ctggtggccc gccttcccgg tcgcatcatc
      121 agcgtagact cggccatgat ctatcgcggt atggatatcg gcacggctaa gccgggaaag
      181 gatctgcttg cccgggcccc ccaccgcttg atcgatatcc gcgatccgag cgagacctat
      241 tccgccgccg agtttcgtag cgacgccttg agggagatga aggcgatcac ggcggagggc
      301 gggatcccgc ttttggtcgg cgggacgggt ctttattttc gtaccctgga gcgggggatc
      361 tcggcattgc ctgccgccga tcccaagata agagcagagc ttgagaccat ggctaaagac
      421 agcggcggct ggcctgccat gcaccggcgt ttggctgaca tcgatcctga ggccgccgct
      481 cggatccacc cccatgatcc gcaacgtatt cagcgcgcgc tcgaggtcta tgcgatcgcg
      541 ggccagccgc tgaccgaact gatcgctcgc cccaccaaac agcccttgcc ttaccggctg
      601 gccaaactga tcgtggcccc cagcgatcgc gccctgttgc ataaacgctt gcaggatcga
      661 ttcgtggcaa tgctagagcg ggggctcgtc gaggaggtca ggggtttata cgcacgcggc
      721 gatctgcacc cggcgatgcc cgcgctgcga ttggtaggct accgccaagt agggcagtat
      781 cttgaaggaa aaatcgatta cccacgtatg ctagaacgat cgatcagcgc cacccgccaa
      841 ctcgccaaac gccagctgac ctggttgcga gccgaagccc atagccgctg gttcgatggt
      901 gaggaccccg gtttgctggc gcggatccta agatatctga accctcatct ctattctcag
      961 tctgactgat atacttatag ggtatagggg aaaccacaaa cgcctatcct tgtctcgatg
     1021 ggtaataagg gattaaaaaa ctgtttcaat aacaaatcac aataaagagg agttcgcttg
     1081 tatgagtaag acccaatc
//
LOCUS       DASQSL010000247         1041 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_57014, whole genome shotgun sequence.
ACCESSION   DASQSL010000247 DASQSL010000000
VERSION     DASQSL010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57014"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..806)
                     /gene="gpmI"
                     /locus_tag="VE844_02470"
     CDS             complement(<1..806)
                     /gene="gpmI"
                     /locus_tag="VE844_02470"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010793679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046537 -
                     2,3-bisphosphoglycerate-independent phosphoglycerate
                     mutase activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HZC00246.1"
                     /translation="MTPITHGPFILIVLDGWGHSDITEYNAIHSAHKPVWDDLWALYP
                     HTLIHCSGLDVGLPDRHMGNSEVGHMHLGAGRLIHQELTRISQTIEEGSFFESPTLIT
                     YFDRAAANGRAVHILGLLSPGGVHSHEFHILAAIELAVRRGVERVYLHAFVDGRDTPP
                     KSAAESLRQAQAKFNELNTGRIASLIGRYYAMDRNNRWQRTKAAYDLIAAGQALYQST
                     DPFIALDMAYARGETDEFVMATAIVPRGEQAVHVEDGDVVVFMNYRADRTR"
BASE COUNT          248 a          263 c          296 g          234 t
ORIGIN      
        1 cgagtgcgat cagcccggta attcataaat accacgacat cgccatcctc cacatggacg
       61 gcttgctcac cccgggggac gatcgccgtt gccattacaa attcgtcggt ctcgcctcgg
      121 gcataagcca tatccaaggc aatgaacgga tcggtcgact gatacagggc ctggcccgct
      181 gcaataaggt cataggctgc tttggtgcgc tgccagcgat tgtttctatc catggcatag
      241 tagcggccga tgagcgaggc gatccggccg gtattcagtt cattgaactt ggcttgcgcc
      301 tggcgcagag attcggcggc actctttggg ggggtatcgc ggccatccac aaaggcgtga
      361 agataaaccc tttctacacc gcgccgaacc gccaactcta tcgccgccag gatatggaac
      421 tcgtggctat ggaccccgcc gggtgagagc aagccgagaa tatggacggc ccgcccgttg
      481 gctgcggcgc gatcgaagta ggtgatcaag gttgggcttt caaaaaagct tccctcttcg
      541 atggtttgac tgatccgggt gagttcctga tggataaggc ggcctgcgcc caaatgcata
      601 tggccgacct cagaattgcc catgtgtcta tccggcagac ccacatcgag gccagagcag
      661 tggatcaggg tgtgcgggta aagggcccag agatcgtccc ataccggttt atgggcactg
      721 tgtatggcat tgtattcggt gatgtcgcta tgaccccagc cgtccagtac aatcaggata
      781 aagggcccgt gagtgatagg cgtcattatg ctccgtggtc cagaaggcgc gtgaagaggg
      841 gaggttctag cctcttccta aataaagggc ccgggctacg gcccggttta aaacaatggt
      901 aagatggaat caccgtgtaa cgtgagaccc atttaatcgt ggtcggttca ggaaaaatct
      961 gtcgtctggt cgaatatatt cgaataaatt tataaataaa ctaggatgtt aaatgcaact
     1021 attaactgaa tttgtaacaa a
//
LOCUS       DASQSL010000248         1042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_165909, whole genome shotgun sequence.
ACCESSION   DASQSL010000248 DASQSL010000000
VERSION     DASQSL010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1042
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165909"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..490
                     /gene="bioD"
                     /locus_tag="VE844_02475"
     CDS             <1..490
                     /gene="bioD"
                     /locus_tag="VE844_02475"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: protein motif:HMM:NF024891.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004141 - dethiobiotin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HZC00247.1"
                     /translation="SQPLPYEWINVYSFEPAIAPHLAAREQGIEMTVEAILAAHERLA
                     DRAEFIVVEGVGGWRVPLNERQGVWDLACHLEYPVILVVGLRLGCINHAVLTAEAIST
                     DGLDLVGWVANQITPDYPRLEATLDTLRARLQAPMLAYIPWLDREDMQTVASYLGRGE
                     AQ"
     gene            745..>1042
                     /locus_tag="VE844_02480"
     CDS             745..>1042
                     /locus_tag="VE844_02480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019864528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZC00248.1"
                     /translation="MPAAISRFSLFSFNSKVRILHLTWLAFFLSFLVWFNHAPLLAAI
                     RESLALNEQQVKTLLILNVALTIPARILIGMLVDKFGPRITYSVLLAIGGGLCFL"
BASE COUNT          229 a          300 c          281 g          232 t
ORIGIN      
        1 aagtcaaccg cttccttatg agtggatcaa tgtttatagc tttgaacctg ccattgcccc
       61 tcacctggca gcacgggagc agggaataga gatgactgtg gaggccatcc tcgctgccca
      121 cgaaagactc gcagaccgag cagagtttat tgtggtcgag ggtgtaggag ggtggagggt
      181 cccgctcaat gagcggcagg gcgtttggga tcttgcctgc cacctcgagt atcccgtgat
      241 cctcgttgtt ggcctgcgcc tgggctgtat caatcacgcc gtgctgaccg ccgaggcgat
      301 cagcacggat ggcctggatc tcgtgggctg ggtggcaaac cagatcactc ccgattatcc
      361 acgcctggaa gccaccctcg ataccctacg tgcccgtctt caggcgccga tgttggctta
      421 cattccctgg cttgatcggg aagatatgca aaccgtcgct tcctacctcg gccggggtga
      481 ggctcagtag caccttcctg gggcagttcc aactaaagcg gcaccggatt ggaacaataa
      541 cggctgcaat cggttccagg ataaacccaa gcgggtcctg gatccctcgg taaataaata
      601 gcttacgccc aaatctccaa gacaggcaaa atttttgcag cgcccacgtc aaagatgccc
      661 tccaggagac tgcccggaac aagagcacac cggcatcgag cgtacgcacg ttaactcaaa
      721 agattgaaca tagagcaacc cataatgcct gcagcgatat caagattcag cctattctca
      781 ttcaatagta aggtccgtat cctccacttg acctggttgg catttttcct cagttttctg
      841 gtctggttca atcatgcgcc gctactcgcg gcgatccgtg agagcttggc cctcaacgaa
      901 cagcaggtaa agacgctgct gatcctcaac gtggcgctca cgatcccggc gcgtatcctc
      961 atcggcatgc tggtcgataa gttcggcccg cgtatcactt actcggtact gctggcgatc
     1021 ggaggaggac tgtgcttcct gt
//
LOCUS       DASQSL010000249         3262 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_70675, whole genome shotgun sequence.
ACCESSION   DASQSL010000249 DASQSL010000000
VERSION     DASQSL010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3262
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70675"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..378)
                     /locus_tag="VE844_02485"
     CDS             complement(<1..378)
                     /locus_tag="VE844_02485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00249.1"
                     /translation="MDGAGRARCGVLYAIVTVSLAPILTPQGYLTLGPTEDAPVLEVE
                     LAVRLQKAFARGSGHGLLQLGAGEVETVLPPVFSYWREFGTRYVTALCALPDAGEGRG
                     TIRVPAPGQAELEQLASAAPLMMG"
     gene            complement(458..1999)
                     /gene="hpnR"
                     /locus_tag="VE844_02490"
     CDS             complement(458..1999)
                     /gene="hpnR"
                     /locus_tag="VE844_02490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005374269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008169 - C-methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0019746 - hopanoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hopanoid C-3 methylase HpnR"
                     /protein_id="HZC00250.1"
                     /translation="MKFLAVHPSALMYTKVFLRLEPLGLESVAQVVRQAGHQVRLIDL
                     QVETPRDYLRLIEKWRPHVVAFSGNYLANVPEIVDLCKLTKERLPQSFVLVGGHSASF
                     IAKEFLEHGEGAIDCIVKGEGEAAMPQLLEAIAHDRCAIAKVPGVVTHGGLGPSPHFV
                     HSLDDLRPARDLLRHRRRYFIGVLDPCASIEFSRGCPWDCAFCSAWTFYGRSYRMISP
                     EKAVEDLACLKEPGIFIVDDVAFIQAKHGLEVGEAIARKGIKKRYYLETRGDVLLRNK
                     EVFEFWKGLGLQYIFLGLEAIDEEGLKTYRKRVSLSRNFEALEYARSLGIQVAINLIA
                     DPSWDERRFEIIRQWCLEVPEIVNISVNTPYPGTETWHTESRRLITRDYRLFDIQHAV
                     LPTHLPLPKFYQELVQTQRILNMKHLGWTALKATAQTVAGQLLRGQTNFMKALWKFNS
                     VYDPRLQLADHQLPVKYAMALPPAPKEKVPAQVLYIHHSQGRRGRALDEGTEQFVEQT
                     RLGND"
     gene            2342..3220
                     /locus_tag="VE844_02495"
     CDS             2342..3220
                     /locus_tag="VE844_02495"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIR domain-containing protein"
                     /protein_id="HZC00251.1"
                     /translation="MAFVPGHKYDVFVSYAHVDNLPLAGAGTAWVSTLIQNLKVLLAR
                     KLGRDLAEIWMDPRLAGNVPLTPAILDSLGETATLLVILSTGYLASEWCQREKNQFLQ
                     LTEKRQHAGSRIFLIELDKVEMHRRPPEFADLLGYRFWEEDVLSKKISILGDPVPRPE
                     EPRYYERLNDLSHDLAAELERLKQSAVGQVAAGGPAVFLAEATDDLETLRDEIKRYLQ
                     QAGLRVLPERWYPRDDPESFRQAMSADLQGCKLFIQLLSGLSGRKPVGLSQGYPGLQY
                     EQAVKIGVTGTAMAQP"
BASE COUNT          698 a          926 c          945 g          693 t
ORIGIN      
        1 acccatcatg agcggggctg ccgaggccag ctgttccaac tcggcttggc caggtgcggg
       61 tacccggatc gtgccacggc cttcacccgc atccggaagc gcacaaagcg ccgtcacgta
      121 ccgcgtaccg aactcgcgcc aataggaaaa gacgggtggc agcacggtct cgacttcacc
      181 ggcacccagc tgcaacaacc catgcccgga accacgcgcg aatgccttct gtaaccgcac
      241 agccagctca acctccaata ccggcgcatc ttcggtggga ccgagggtaa gataaccctg
      301 cggcgtcaga ataggggcta gggataccgt cacgatcgcg taaagcacgc cacagcgtgc
      361 ccgtccagcg ccatccatgg gagcgcacga atgagggggt agttgggggt tatcgagtac
      421 aatttcgtag attacatgag ggcggttgct cagaatttca atcgttccct agccgggttt
      481 gctcgacaaa ttgctcggta ccctcgtcaa gggcgcgacc gcgacgcccc tgggagtggt
      541 gaatgtaaag gacctgcgcc ggtactttct ccttcggcgc aggaggtaaa gccatcgcgt
      601 atttcacggg cagttgatga tcggccagct ggagccttgg gtcgtatacg ctattgaact
      661 tccagagcgc cttcataaaa ttggtttgtc cccgcaggag ctgcccggcc acggtctggg
      721 cggtggcttt caaggccgtc cagccgagat gcttcatgtt taagatccgt tgggtctgga
      781 ccagctcctg gtaaaacttg ggcagcggta agtgggtcgg caggaccgca tgctggatat
      841 caaacagccg ataatcgcgc gtgatcaatc ggcgggattc ggtgtgccag gtttcggtcc
      901 ccgggtaggg cgtgttgacg ctgatgttga cgatctccgg cacttccaga caccactgcc
      961 ggatgatctc gaagcggcgc tcatcccaac tcggatcggc gatgaggttg atcgccacct
     1021 ggatcccgag cgagcgggca tactccagcg cctcgaaatt tcggctaagg cttacccgtt
     1081 ttcgatacgt cttcaagcct tcttcgtcga ttgcttcaag gcccaggaat atatattgca
     1141 aacccaggcc cttccagaac tcgaagacct ccttattgcg tagcagcaca tcaccgcggg
     1201 tctcgaggta ataccgcttt ttgatccctt tgcgcgcgat agcttctccg acctccaggc
     1261 catgcttggc ctggataaag gccacgtcgt cgacaatgaa gatgccgggt tccttgagac
     1321 acgccaggtc ctccaccgcc ttttccggac tgatcatgcg ataactgcgg ccatagaagg
     1381 tccaggcgct gcaaaatgcg cagtcccagg gacatcctcg cgagaattcg atcgaagcac
     1441 agggatcgag cacgccgata aaataccttc ggcggtggcg caaaagatct ctcgctggac
     1501 gcagatcatc gaggctatgg acgaaatgcg gggacggtcc aaggcctccg tgagtgacca
     1561 cgcccggtac tttggcgatc gcgcagcggt catgtgcgat cgcttccaaa agttgcggca
     1621 tcgccgcctc gccttcgccc ttgacgatgc agtcaatggc gccctcaccg tgctctaaaa
     1681 attctttcgc tataaaggag gcgctgtggc cgcctaccaa gacgaagctc tgaggaagtc
     1741 tttctttggt gagtttgcaa agatcgacga tctccggcac attcgctaga tagttaccgg
     1801 agaaggccac tacgtggggg cgccatttct cgatgagcct gagatagtcc cgaggggttt
     1861 ccacctgcag atcaatcagg cgcacttgat ggccggcttg gcgaactacc tgggccactg
     1921 actcaagccc gagcggctct agccgcagaa aaacctttgt gtacatcagc gcgcttggat
     1981 ggacggcgag gaatttcata gtttaaagac cggctgtggt ttttattctt ctgaccttgc
     2041 cctttggaga atcaggttta aattacagga tttacctgtg tggctgatcg gctattcaac
     2101 tagagtaatc cgtgatgttt cctcaggtca acccatattc tctgactcta tcggattatg
     2161 ctgatgctcg ggcggctggg tagcgctaca gttaaccgtg gtgcccgtgt gacaagctgt
     2221 gtggccactc tatcttatgg tacgattcca aaaacgcggg gatctgcaac gcttgcttaa
     2281 actaagcgct aagcagtagc cataatacct tgattcatat cgatagggag taaaaagaga
     2341 gatggccttt gttccgggac acaaatatga cgtgttcgta agctacgccc acgtggacaa
     2401 tttgccctta gccggtgcag gaaccgcttg ggtcagcacg ctgatccaga atctcaaggt
     2461 cctcctcgcc cgcaagctcg gccgtgacct ggccgagatc tggatggatc cccgcttggc
     2521 tggtaacgtg ccgctgaccc cggcgatcct ggacagcctg ggggaaaccg cgaccttgct
     2581 ggttatcctg tcgaccggtt acctggcctc cgagtggtgc cagcgggaga aaaaccaatt
     2641 cctgcagctc accgaaaagc gtcaacacgc cggctcgcgg atcttcctga tcgaattgga
     2701 caaggtggag atgcacaggc gcccgccgga atttgcagat ctcctgggtt accggttctg
     2761 ggaggaagac gtgctgagca aaaagatctc tatcctgggc gatccggtac cccggccgga
     2821 agaaccgcgg tattacgagc ggttaaacga tctaagtcac gatctggcgg ccgagctcga
     2881 acggcttaag caaagcgcgg tgggacaggt cgcagcaggc ggacccgccg tgtttctggc
     2941 cgaagctacc gatgatctgg agacgctgcg cgatgagatc aagcgttacc tccagcaggc
     3001 cgggctgcgc gtgctgcccg agcggtggta tccacgcgac gatcctgagt ctttccgcca
     3061 ggcgatgtcg gccgatctcc agggctgtaa actgtttatc cagctcttaa gcggtctcag
     3121 tggccgcaag ccggtggggc tatcacaggg ctatcccggt cttcaatacg aacaggcggt
     3181 aaagatcggt gttacgggta ctgcaatggc gcagccgtga gctcgatctg gataccgtgt
     3241 ccgacgaggc gcaacgcaaa ct
//
LOCUS       DASQSL010000250         1046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_16248, whole genome shotgun sequence.
ACCESSION   DASQSL010000250 DASQSL010000000
VERSION     DASQSL010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16248"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(247..>1046)
                     /locus_tag="VE844_02500"
     CDS             complement(247..>1046)
                     /locus_tag="VE844_02500"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC00252.1"
                     /translation="AVIVALIESHCPDQLGLRASLWTRETVGTLIKKHFGLALSVWTV
                     GRYLRRWGLTPQKPARRAYEQDPEAVRHWLEVEYLEVRKQAKAEGAEIHWGDEMGVCS
                     DHQAGRTWSRKGKTPVVQGTGQHFRCNIISALTNQGTLRFRVFQENFSGEVFIDLLRR
                     LVRDRGKKVYLIVDRHPVHTSRKVQWWVERHQEEIRLVYLPPYSPALNPGEYLNQDVK
                     SNAAGRWQPRTQRKMMDNLRSYLRSTQKCQDVVRRFFHAEPVRYAAA"
BASE COUNT          210 a          330 c          283 g          223 t
ORIGIN      
        1 gcccgtgcac cctcgctggg cgggcggcga ggtggtctgg tcgatccccc gaggtacggc
       61 taattgtggc acaccttttc tcaggcagcg ttttgcgtta tttcggaacg cccgagcaag
      121 caaatattca gacgaactct ggcagccgcg cggtagccga gtagcgagca tacataattt
      181 aacaactggg atacgagtcg tatgacaaaa acacttatta atctgagcac tttataggtg
      241 acaccatcag gcagcggcat agcgcaccgg ctcagcatga aagaagcgcc gcaccacgtc
      301 ctggcacttc tgggtactcc gcaggtagct tcgcaagttg tccatcatct tcctctgagt
      361 gcgaggctgc cagcgccccg ccgcattgct cttaacgtcc tgattcaggt attcaccagg
      421 attcaatgcc ggactataag ggggtaggta gaccagccga atctcttctt ggtggcgctc
      481 cacccaccat tgcaccttcc tggaagtatg cactgggtgg cggtctacaa taagatagac
      541 cttcttccct cggtcccgga ccaggcggcg cagaaggtcg ataaacactt cgccactgaa
      601 gttttcctgg aatacccgaa atctcagggt gccctggttg gtcaacgctg agatgatgtt
      661 gcaccggaag tgctggcctg tgccctggac cactggcgtc ttccctttcc ggctccaggt
      721 gcgacctgcc tggtggtccg agcacacccc catctcatca ccccagtgga tctccgcccc
      781 ttccgccttc gcctgtttgc gtacctccag atactccact tccagccagt ggcgcaccgc
      841 ctccgggtcc tgttcgtaag ccctgcgggc cggtttctgg ggagtcaacc cccagcggcg
      901 caggtagcgg cccaccgtcc acaccgaaag ggccaggcca aagtgctttt taatcagggt
      961 acccactgtc tcacgggtcc acagagacgc gcgcaggcca agctggtccg gacagtggga
     1021 ttcgataagc gccactatga ccgcct
//
LOCUS       DASQSL010000251         2970 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_193273, whole genome shotgun sequence.
ACCESSION   DASQSL010000251 DASQSL010000000
VERSION     DASQSL010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2970)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2970)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2970
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193273"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..323)
                     /locus_tag="VE844_02505"
     CDS             complement(<1..323)
                     /locus_tag="VE844_02505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HZC00253.1"
                     /translation="MRTPGKNPPGGQKGHEGHTLKKAESPDHIVLHAPPAICECGLPL
                     PEATVVEARQVFDLPSMHYEVTEHWVLAACCACGKRHRGEFPEGVNAPVQYGPGLKGA
                     VLHLT"
     gene            complement(373..534)
                     /locus_tag="VE844_02510"
     CDS             complement(373..534)
                     /locus_tag="VE844_02510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00254.1"
                     /translation="MKSLPDLDRLSVAEKDALIRAQFVQIQVLTAEVAALTAKVAELE
                     GRLALNSRN"
     gene            complement(632..1813)
                     /locus_tag="VE844_02515"
     CDS             complement(632..1813)
                     /locus_tag="VE844_02515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00255.1"
                     /translation="MNESEFAKAHIDRLERQYPEIFPEGLEGGYVLYGFTDPSRKQQL
                     RCRRIRLNATGEVFTVAPAFVMPYMSATVAEAEKALLLMRFHVPYWAIAYVFGRDAMY
                     WYRLQQGLGRFSVVGTTVKPPARLPTDLVADEKHSWLDGERIYLATTAGEECILGASV
                     AASASEAALTQAYGVFADEAKAVDPDYAPETVNTDGWSATQGAWKALFPTITVILCFL
                     HAFLKIRDRATKALAEAFDQVRERVWQAYHAPTKAAFAQRLRRLREWATRTLPDSPMK
                     NHTLDLCDKRAQFSRSYNHQWAHRTSNRVDRLMKFLDRACFNGQYFHGTLISAELRVR
                     ALALLWNFCPSSPDTVRKHRGQRCPAERLNGKRYAENWLENLLVSASMNGLRPYQQNP
                     L"
     gene            complement(2043..2819)
                     /locus_tag="VE844_02520"
     CDS             complement(2043..2819)
                     /locus_tag="VE844_02520"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HZC00256.1"
                     /translation="MANVTDWLSFVTGTTSGLGRALAQELLRRGWEVIGMARRPSAIN
                     HEKYHHLQLDLGEIGSIQSSFQQVGNTLQLAKRQRVGLVNNAASPGQFGALEALEPSA
                     LLRLYAVNVVAPVWLMGFLIRTCRSSSALRIVNLSSGAAVRPFPGLGAYGSSKAALRM
                     AGMVLGAELGSTTRPGERPSDLAILSYEPGLVDTDMQATARSRSPEEFPWVDQFRAFA
                     EAGQLVAPEAVVVEIADFLEADRCPLFIERRFGVGPSGSG"
BASE COUNT          630 a          937 c          802 g          601 t
ORIGIN      
        1 tgggtcaaat gtagcacagc ccctttcagg cccggcccat attgcaccgg tgcattcacg
       61 ccttcgggaa actcgccccg gtgccgcttg ccgcaggcgc agcaggccgc tagcacccag
      121 tgttcagtga cttcgtaatg catggacggc agatcgaaga cctgccgggc ttcaaccact
      181 gtcgcctccg gcagcggcaa gccgcactcg cagatagccg gcggtgcatg gagtacaatg
      241 tgatcgggtg attcggcctt cttgagggta tgcccttcat gccccttttg gccgcccggc
      301 gggttcttgc cgggcgtccg caatgacttc ggcttgggct tgccataacc ctccgccgag
      361 ggcggcttga cttcagttcc gactgttcag cgccagtcgc ccttccagct cggccacctt
      421 cgctgtcagc gctgcaactt cggcagtcag cacctggatc tgcacaaact gcgcacggat
      481 cagcgcatct ttctcggcaa cgctgagacg gtcaagatca ggcaatgatt tcatgctcgc
      541 ctttatcgca tatttcagcc gtttttaaca gtcggaaaag cgatactttt cctggctacc
      601 tgagcagtca cgagaaattc acatttcctg tttataacgg attctgttga tagggtctca
      661 agccattcat cgaggccgag acgagcagat tctccaacca gttctcagcg tagcgcttgc
      721 cgttaagacg ctcggccgga cagcgttgcc cccggtgctt tctgaccgtg tctggtgagg
      781 aggggcagaa gttccacagc aacgccaggg cgcgcacgcg taactcggct gatatcaacg
      841 tgccatggaa atactggccg ttaaaacagg cccggtcgag aaacttcatc aaccgatcga
      901 ccctattact ggtccgatgt gcccactgat ggttatagct acgactgaac tgcgcgcgct
      961 tatcacacag atccaaggta tggttcttca ttggcgagtc cgggagcgtt cgcgtagccc
     1021 actcgcgaag ccggcgcagg cgttgggcaa aggcagcctt ggtgggcgca tggtacgcct
     1081 gccagactct ctcccgtacc tgatcgaagg cctcggccag ggctttggtt gcgcgatcac
     1141 ggatcttcag aaacgcgtgc aggaaacaga ggattaccgt gatcgttgga aacagcgcct
     1201 tccatgcccc ttgggtggca gaccagccat cggtgttgac cgtctcgggt gcatagtccg
     1261 gatcaaccgc cttggcttcg tcggcaaaca ccccataggc ctgcgtcaag gccgcttccg
     1321 aggctgaagc ggccaccgac gcaccgagga tacactcctc cccagcggtc gtggcaaggt
     1381 agatccgctc cccgtccaac caactgtgct tttcatcggc caccaggtcg gtgggcaacc
     1441 gcgcgggcgg tttgacggtc gtaccgacca cactgaaccg gcccaaccct tgctgtagcc
     1501 gataccaata cattgcatca cggccaaaga cataggcaat ggcccaatac ggaacatgaa
     1561 agcgcatcaa caacaacgcc ttttctgcct ccgctaccgt tgcactcatg tacggcatca
     1621 caaacgctgg cgccacagta aacacctccc ctgtcgcatt gagacggata cggcggcaac
     1681 gcagctgttg cttgcgcgat ggatcggtaa acccatataa cacataccct ccttccagcc
     1741 cttcgggaaa tatctctgga tactgtcgct ccagtcgatc aatgtgcgcc ttagcaaact
     1801 cactctcgtt cataaaccct tcatactcag cttcagcaat tggaagccga atcgttcgat
     1861 agcctctggt cggtcgatgc gctacagtgt ccactgctgc ctccgggtgt cgagtacggg
     1921 gttgggtgat actaactccc aacatctcgc actcggagac ggctttcaac tcgactttag
     1981 ctcatcaaca gaatccgtta taaacagcag atttgaactc cgctgacctt cggtggggtg
     2041 ggctacccgc tcccgctcgg cccaactccg aagcgccgct ctatgaagag gggacatcgg
     2101 tctgcctcca agaagtcggc gatttctacg acgaccgctt cgggcgcgac caactgaccc
     2161 gcttctgcaa acgcacggaa ctgatcgacc caagggaact cttccgggga ccgggaccgc
     2221 gccgtcgcct gcatatctgt gtccactagg ccgggctcgt agctcagaat ggcgagatcg
     2281 gacggccgct cacccggacg cgtagtcgag cccaattcag caccaagaac cattccggcc
     2341 attctcagag ctgccttgct gctcccatac gcaccaagac ccgggaaagg tcgaactgcc
     2401 gcacccgacg agaggttcac gatccgaagc gcggagctag accggcaagt gcggatgagg
     2461 aaacccatca gccagaccgg agccaccaca ttgacggcgt acagcctgag cagagctgac
     2521 ggctcgagcg cctccaatgc gccgaactgt ccagggctcg ccgcgttgtt caccaagccg
     2581 acccgttgcc gctttgcgag ttggagtgtg ttacctacct gctgaaaaga agactgaatt
     2641 gacccgatct ccccaaggtc cagctgcaga tggtgatact tttcatggtt gattgccgac
     2701 ggacgtcgcg ccataccgat tacctcccaa ccccggcgca ggagctcctg ggccagggcc
     2761 ctcccgaggc ccgaggtggt gccggtaaca aacgagagcc agtcagtcac atttgccacg
     2821 agctcgtacc tccggatgct ctgagagaaa tagcggacag cgcatgcgcc gtccctcgtg
     2881 ccagcagcct atgaagagtt tctgggctta agtgccctat atatcattcg agcgggaacc
     2941 gctataataa cgtagcaccc atgccaccgg
//
LOCUS       DASQSL010000252         1328 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_153163, whole genome shotgun sequence.
ACCESSION   DASQSL010000252 DASQSL010000000
VERSION     DASQSL010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1328
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153163"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(191..502)
                     /gene="cutA"
                     /locus_tag="VE844_02525"
     CDS             complement(191..502)
                     /gene="cutA"
                     /locus_tag="VE844_02525"
                     /inference="COORDINATES: protein motif:HMM:NF015077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010038 - response to metal ion [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent cation tolerance protein CutA"
                     /protein_id="HZC00257.1"
                     /translation="MMVLVYITLNTLEEGQQLAHLLIERQLTNCVNFHAITCTYAWEG
                     KITTEPEIVALVKTRAEHFDAIATAVKEVVPYTNFVGQLDVSRVNEAFASWLADVVGA
                     A"
     gene            800..>1328
                     /locus_tag="VE844_02530"
     CDS             800..>1328
                     /locus_tag="VE844_02530"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZC00258.1"
                     /translation="MAQRVIVAGGGIVGAAVTYYLARAGAQVTLLEREQPGRKTSNNS
                     FAWVNAFSRTSRAYYDFARRSIELYRQLPEELGLDMELHWHGGIHWVDSPAAAETLRT
                     RVQELQSWGHPVGLITREDLVAREPHLRPTLTAACYSSLDGATHPPSVIHALLTRAQA
                     LGAEMQTDTSLVGIEV"
BASE COUNT          278 a          382 c          400 g          268 t
ORIGIN      
        1 aggacgatat ttcaacaggc gagcaaaaac atctggcaat gtaatcggtt cgtgccacat
       61 tcgtcaagac tgggtagata tccggatatg ccctctgcgg cgccccctct ggccgatcgt
      121 tctccctcgc ctactaggag agagggcgat atgccgaccc ctggcagctt gacgggggag
      181 gacttggggg tcatgccgcg cccacgacat cggcgagcca cgaggcaaat gcctcattga
      241 cacgtgacac gtcgagttgt cccacgaaat tggtgtacgg cacaacctcc ttgacggcgg
      301 ttgcaatagc gtcgaagtgt tccgcacgcg tcttgacgag ggccacaatc tcaggttcgg
      361 tggtgatctt tccttcccag gcgtaggtgc aggtaatggc atgaaagttc acgcaattgg
      421 tcaactgacg ctcgattaag aggtgtgcca gttgctgccc ttcctctaga gtattcaagg
      481 tgatgtagac cagaaccatc atctccacct ccgtcgccac ctgaccgcta ccgtggggag
      541 ctcacatagc gctggccagg cagcgatgca cttctccagt atttatgagc tgcgccgtag
      601 cgtctgtatc tctgggtcat aggacatgag tccatgatgg catcatgata ccatgaatcc
      661 ctgctccagg tggtcgagtg gtgggtggag agatcccaag cggtctggac ctcacctcct
      721 gcccatgcta gagtggcgca agcaaatagt ctgaggggac agcagcgatg atcgagacga
      781 tcaggacaag gagaaggtca tggcgcaacg ggttatcgtc gcggggggag gcattgttgg
      841 ggcagcggtg acatactact tggcgcgggc aggagcccag gtgacgctac tcgagcgtga
      901 gcaaccgggc cgcaagacgt cgaacaattc atttgcctgg gtgaacgcct tttcccgcac
      961 cagtcgcgcc tattatgact tcgctcgccg cagtatcgag ctctatcgac aactcccgga
     1021 ggaattgggc ctcgacatgg agctgcactg gcatggcggc attcattggg tcgatagccc
     1081 ggcggcagcc gagacactcc ggactcgcgt ccaggaactg caaagctggg ggcacccggt
     1141 cggcctgatc acccgtgaag acctagtggc gcgggaaccg catctgcgcc ccacgctcac
     1201 ggcagcctgt tactcctctt tggatggggc cacccacccg ccctccgtca tccatgcctt
     1261 gctaactcgg gctcaggcgt tgggggccga gatgcagacc gacacaagct tggtcggaat
     1321 agaagtgc
//
LOCUS       DASQSL010000253         1107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_57047, whole genome shotgun sequence.
ACCESSION   DASQSL010000253 DASQSL010000000
VERSION     DASQSL010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57047"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1107
                     /locus_tag="VE844_02535"
     CDS             <1..>1107
                     /locus_tag="VE844_02535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010961370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HZC00259.1"
                     /translation="QSTANTLEVAHAVKAELPAIAASLPPGMELRVAFDTSLSIDGSI
                     RAVFEALWQALVLVVAVTFLFLRSPSATLIPFVTIPVSLTGAFIFIYALGFSVNVLTL
                     LALVLAIGLVVDDAIVMLENIYRRIEAGMTPVKAAFEGSREIAFAIIAMTLTLATVFT
                     PLTFMQGNTGRLFSEFALAVSSAVLVSGFVALTLTPMMCSKLLRRTPSHNRLYRLSER
                     GLNVITEGYRRSLSAILQVRWLVILLAAIAAGTSYFLFTGLKAELAPIEDRSIIIGII
                     NAPEGATLAYTDGYARRIEGILKEVPEIRGYFMVIAPGLERPNPVNLALAFVNLKPWE
                     ERARSQQAVAAELMPKFFDLAGVLAFPISPPSLG"
BASE COUNT          182 a          340 c          315 g          270 t
ORIGIN      
        1 aacagtccac ggccaataca ctcgaggttg cgcacgccgt gaaggccgag ttgccggcca
       61 ttgccgcctc cttacccccg ggcatggagc tgcgggtcgc ttttgatacc tccttgtcca
      121 tcgatgggtc cattcgggcg gtattcgagg ctctgtggca ggccctggtg ctggtcgtgg
      181 ccgtgacctt tctgttcctg cgctcgccct ccgccacgct gatcccgttt gtgaccatcc
      241 cggtatcgtt gaccggcgcc tttatcttca tctatgccct gggtttttcc gtcaatgtgc
      301 tcaccttgct cgccttggtg cttgcgattg ggctcgtggt agacgatgcg atcgtgatgc
      361 tcgagaatat ctatcggcgc atcgaggcag gtatgacgcc ggtaaaggcg gcgttcgagg
      421 gcagccgcga gatcgccttt gcgattatcg ccatgaccct gacactcgcc accgtcttca
      481 cccccctcac cttcatgcaa ggcaataccg ggcgcctgtt tagcgagttt gccctggcgg
      541 tttcctcggc ggtcttggtc tcgggttttg tcgccctcac cttaacaccc atgatgtgct
      601 ctaagctatt gcggagaacg ccaagtcata accgcctcta caggcttagc gagaggggat
      661 taaatgtaat aacggagggc tatcgccgat ccctctcggc gatcttgcag gtccgctggt
      721 tggtgattct gctcgccgcg atcgccgccg ggacaagcta tttcctgttt accggcttaa
      781 aagccgagct cgcgccgatc gaggaccgca gcattatcat cggcatcatc aatgcccctg
      841 aaggtgcgac cctggcttat actgatggct atgcgcggcg catcgagggt atcctcaagg
      901 aggtgcccga gatccgaggc tattttatgg tgattgcccc agggctcgag cggcccaatc
      961 cggtcaatct cgccctcgct tttgtaaatc tcaagccctg ggaggagcgg gcgcgcagcc
     1021 aacaagcggt tgctgcggaa ctgatgccta agttcttcga tctggcgggg gtgctcgctt
     1081 ttcccatcag tcccccatcc ttgggcc
//
LOCUS       DASQSL010000254         1842 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_57052, whole genome shotgun sequence.
ACCESSION   DASQSL010000254 DASQSL010000000
VERSION     DASQSL010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1842
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57052"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            234..1739
                     /locus_tag="VE844_02540"
     CDS             234..1739
                     /locus_tag="VE844_02540"
                     /EC_number="2.4.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011418713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003825 - alpha,alpha-trehalose-phosphate
                     synthase (UDP-forming) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-6-phosphate synthase"
                     /protein_id="HZC00260.1"
                     /translation="MSNTETLGQRLIVVSNRLPLVVSQGEDGNWQVSPGAGGLVTALV
                     PVLRDRGGVWIGWPGTTQDSDEVQAVLAQTTGDAGYRLVPVMLTAAEAHDFYLGFSNE
                     IIWPLFHDLQYLCNFDPTYWQAYVKVNRKYAQIIAEQSGASDFVWVHDYHLMDVAAEL
                     RRLGVGTKSGFFLHIPFPSLDMFLKLPWRQSILRALLEYDLIGFQTLRDRRNFVQCLQ
                     ALVKDVALYGKGQVLLTRVGGREVRIGHFPISIDAHAFAKAAAKQEVAEIVGQLHQLL
                     GNRQLILGVDRLDYTKGILQRLEAFRNALSRYPDLHNQVTLVQVVVPSREDIPRYHEL
                     RTQIEQQVGRINGEFTRPGGWVPIHYVFRSLSPPELLAYYRAAEIALVTPLKDGMNLV
                     AKEYCMCSLEEDCVLILSEFAGAAVQLRHGALLVNPYDIEGVADVTHRAFMMDKDERQ
                     RRMRELRRSIRKRDIFWWVDAFLRAAIAKDLSAFPMAEHAIPKESRGERSF"
BASE COUNT          370 a          522 c          560 g          390 t
ORIGIN      
        1 ccaagctgct tatgtacatt ctctgcaccg ttgctcgtca agctccggtt cctcttgcag
       61 ctttggcgat gatcttacgg acgaggcgcg tttcatcatg ccatcaaggg atacgggctc
      121 ggcgtcctag tacgggccga gctacggtcg accctggcga atctctggtt gcggccacca
      181 ggaaagctac tggcgttcct agagcaatgg gcggacagcg tgaggaagtt atcatgagca
      241 ataccgaaac gctggggcaa aggcttatcg tggtctccaa ccgcctgccc ttggtggtca
      301 gccaggggga ggacgggaat tggcaggtca gccctggcgc tgggggactc gtcaccgcgc
      361 tggttccggt cctgcgggac cgtggtgggg tgtggatcgg ctggccgggg accacgcagg
      421 actcggatga ggtgcaggcg gtgctcgccc aaaccacggg tgacgcaggt tataggctgg
      481 tccccgtcat gctcacggcg gcggaagcgc atgactttta tctcggcttt tccaatgaaa
      541 tcatctggcc gttatttcac gatctccaat acctctgcaa ttttgatccc acctactggc
      601 aggcgtacgt caaggtcaat cgcaagtatg cccagatcat tgcggagcag agcggagcat
      661 ccgacttcgt ctgggtacat gactatcacc tgatggatgt cgcggccgaa ttacgccggc
      721 tgggagttgg caccaagagc ggattcttcc tgcacatccc gtttccgtcg ctcgatatgt
      781 ttctcaaact cccctggcgg caaagcatct tgcgtgcgct ccttgagtat gatctcatcg
      841 ggtttcagac actgcgtgac cgccgcaact ttgtgcaatg cctgcaggcg ctggtcaagg
      901 atgtcgccct ctacggcaaa gggcaagtgt tgctcacccg agtagggggg cgggaggtgc
      961 gcatcgggca cttccccatc agcatcgacg cccacgcgtt cgccaaagca gcggcgaaac
     1021 aagaggtagc cgaaatagtg ggacagttgc accaattgct gggtaatcgc caattgatcc
     1081 tgggggttga tcggctggac tacacgaaag ggatactcca gcgcctggag gccttccgca
     1141 acgccctgtc tcgctatccc gacctccaca accaggtgac cctggtccag gtggtggtgc
     1201 caagtcgtga agatatcccc cgctaccacg aactccggac ccagattgag caacaagtag
     1261 gaagaatcaa cggcgagttt acccgaccgg gcggctgggt gcccatccac tatgtgttcc
     1321 gtagcttatc gcccccggag ctgctggcct attaccgcgc cgccgagatc gcgctggtca
     1381 cgccgctgaa ggacgggatg aacctcgtgg ccaaggagta ttgcatgtgc agcctcgaag
     1441 aggactgtgt gctcatctta agtgagttcg ctggcgcagc agtgcagtta cgccatggcg
     1501 cgctgctcgt caatccatac gatatcgagg gcgtggccga cgtgactcac cgggcgttca
     1561 tgatggacaa agatgagcgg cagcggcgca tgcgcgagct gcggcgatcc attcgcaagc
     1621 gggacatctt ctggtgggtg gatgccttcc tgcgtgccgc gattgctaag gatttgagcg
     1681 cgttccccat ggcggagcac gcgataccaa aagagagcag aggcgagcgc agtttctagt
     1741 actctgtcaa tgttggcact agttccgatt aattccaatg aactgatttg actcgttggg
     1801 gatcaaggtt ccggccgcgg ccccgttcgc aacattaaca at
//
LOCUS       DASQSL010000255         2132 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_165924, whole genome shotgun sequence.
ACCESSION   DASQSL010000255 DASQSL010000000
VERSION     DASQSL010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2132
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165924"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..246)
                     /locus_tag="VE844_02545"
     CDS             complement(<1..246)
                     /locus_tag="VE844_02545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011564636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HZC00261.1"
                     /translation="MTNETGESMGTQGRMTICQISDIHCGSPYFIPDLLERSILEIND
                     MDPAAVVVSGDLTNAGYRQEFETAAGYIQGFRCERVMV"
     gene            532..750
                     /locus_tag="VE844_02550"
     CDS             532..750
                     /locus_tag="VE844_02550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00262.1"
                     /translation="MSRTVILILTVTALMGAVSGAAFTVTLTGKGGDNSLKGSDEADT
                     PYARGGSDSVFDYGRDGKLSGEGDADGL"
     gene            complement(1097..2089)
                     /locus_tag="VE844_02555"
     CDS             complement(1097..2089)
                     /locus_tag="VE844_02555"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HZC00263.1"
                     /translation="MHKLSGASLFAVGFALILAVILWIATTAPPATMFSNPAFAQYRG
                     KQIDYFALGDSVASGHGLDGATGKCLQSSKAYPYTVSDALKRRYHKVNFPPQHHLACS
                     GAKVGNLQGQVDYVVKHLSADHPTLVSITIGANDFEFYKEKKMKKLLLPRRTGVIGGG
                     TSEADFKKWADAKATEVKNQLQPAVTRLILKPKVVVVITDYYNPMNKKAAKFVAPRIG
                     PASTELCGTCRPRFGYAIAQLNGAFVDVSDALENPAQLALTGDLQPKDAVPIRESFVD
                     HEAPHQYRLHTCGKASPGLDGTWIQPYPDCIHPNEEGAVQIGKTVNLEAYRAGR"
BASE COUNT          455 a          626 c          583 g          468 t
ORIGIN      
        1 gaccattaca cgctcgcagc ggaaaccctg gatgtacccc gccgccgtct cgaactcctg
       61 ccggtagccg gcgttggtaa ggtcgcccga gaccacgacg gccgccgggt ccatgtcgtt
      121 gatctccaga atagaacgct ccagcaggtc gggaataaag taggggctgc cgcagtggat
      181 atcgctgatc tgacagatgg tcatccggcc ctgcgtgccc atgctctccc ctgtttcgtt
      241 agtcacgaaa ttccctggaa aagtatagca gagcgcctgt caggcacgtc ccgagttcgg
      301 cgcagaaccc tctacgtccg ccaagcctcg tccgtacgtg agccgccgcg ctctcttctc
      361 gccgctgccc ccgatgaacg ccggcaccgc ttcaggctta acggcgttgc cgagacgtcg
      421 ccgaaccgtg cccaaagcat ttcctgcttg tcgccgggac gttacccgac ccccttacag
      481 tatcagccac aacaaccggt gtggccggga gcgagaccga aaagagaaac catgagtcgt
      541 acggtgatct tgattctgac ggtaacggct ctgatggggg ctgtctcggg agcggccttc
      601 acggtaacgc tcaccggcaa aggcggcgat aactccctca agggttcgga cgaggccgat
      661 accccgtacg cgaggggcgg ctccgacagc gtcttcgact atggccgcga cggcaagctc
      721 tccggcgagg gcgacgccga cggcctctaa aacggaccca gcaacgacgg agtccacggc
      781 ggaagcggct acgatcgttc tacagcggta gtcaatgaaa ttggaccacc cttgcgatgt
      841 ctgctttcaa gcatagcgcc gtaggcttcg gaacgcccga catgcccccg ccaagctggg
      901 gaaggagcat aggtccaata tcattgcaca atgctatagg accggggcaa tgctgcgttc
      961 tcggaagtgg tgcggtggtg cgcgaagatg tgccgttggg ctgatgcaac ttgccaggcc
     1021 ggaaggaggc tgccctcgtc acgtgacgcg cggggcggag cgagtttacg ccaaaagcag
     1081 gataacctaa ttccttttaa cggcccgccc tatatgcctc aaggttcaca gtcttcccaa
     1141 tctgtacggc accctcttcg tttgggtgga tgcagtcagg ataaggttgt atccaggttc
     1201 catccaaccc aggtgaggct ttaccgcacg tgtggagccg atattgatgg ggagcctcat
     1261 gatcaacgaa gctttctctt ataggcaccg cgtccttcgg ttgcaggtca cctgtgagcg
     1321 ccagttgcgc tgggttctcc aatgcgtccg acacatccac aaaggcaccg tttagctgag
     1381 cgatagcata gccaaacctt ggcctgcatg tgccacaaag ttccgtactc gctgggccta
     1441 tcctaggagc aacgaatttc gcggcctttt tgttcatggg attgtagtaa tccgtaataa
     1501 cgactaccac ttttggcttc aagataagac gggtcaccgc cggctggagc tggttcttaa
     1561 cctctgtcgc tttagcgtcc gcccactttt tgaagtccgc ctcgctagtg ccgcctccta
     1621 ttactcctgt tcgcctcggc aaaagaagct tcttcatctt cttttctttg taaaactcaa
     1681 aatcgttcgc accgatagtg attgagacga gtgtagggtg atcagcggag aggtgtttta
     1741 ctacataatc cacctggcct tggaggttac ctactttggc tcctgaacat gctagatgat
     1801 gctgcggtgg gaagttgacc ttatgatagc gccttttcaa cgcatcactc accgtgtaag
     1861 ggtaagcttt gctcgattgc aaacacttcc cagtagcacc atccaacccg tggcccgacg
     1921 ctactgagtc tccgagcgcg aagtaatcga tttgtttccc cctatactgg gcaaacgctg
     1981 gattagaaaa catggtcgct ggcggagccg tagtagcaat ccacaggatg acagccagta
     2041 tcaaggcaaa gcctacggca aataggcttg cgccagacag cttgtgcata aaaccacttc
     2101 tccttgcgcc cacgcttcac tgcggagtat tt
//
LOCUS       DASQSL010000256         2272 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_153176, whole genome shotgun sequence.
ACCESSION   DASQSL010000256 DASQSL010000000
VERSION     DASQSL010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2272)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2272)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2272
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153176"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..504
                     /locus_tag="VE844_02560"
     CDS             <1..504
                     /locus_tag="VE844_02560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016515586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WD40 repeat domain-containing protein"
                     /protein_id="HZC00264.1"
                     /translation="DGTVKLWEVSTGRELTTLKGHADLVYSVAFAPDGKTLASGSTDG
                     TVKLWEVGTGRELATLKGHRDWVYSVAFAPDGKTLTSGSRDGTVKLWEVGTGRKLATL
                     KGHVDQVYSVAFAPDGKTLVSGNSDGTVNVGGGYGQGTSHAHGARIYGLFSYIFTRWE
                     NAGLGER"
     gene            466..568
                     /locus_tag="VE844_02565"
                     /pseudo
     CDS             466..568
                     /locus_tag="VE844_02565"
                     /inference="COORDINATES: protein motif:HMM:NF012618.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="WD40 repeat domain-containing protein"
     gene            complement(635..1174)
                     /locus_tag="VE844_02570"
     CDS             complement(635..1174)
                     /locus_tag="VE844_02570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009785262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HZC00265.1"
                     /translation="MSDHEFFEFCQLNQDLRIERTSEGDLIIMPPTGGETGRRNFILT
                     VIFGEWVARDGTGIGFDSSTGFTLPNGAKRSPDLAWVKRTRWESLTEAEQEEFPPLCP
                     DFVVELRSRSDALETLQAKMQEYLTNGAQLGWLLDPHEKKIYIYRPSAEVCCLEDPET
                     LSGEPVLPGFVMDLRRLWS"
     gene            complement(1328..1837)
                     /locus_tag="VE844_02575"
     CDS             complement(1328..1837)
                     /locus_tag="VE844_02575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00266.1"
                     /translation="MFTLGALGLTAAYVVLALLLLNLNLYSNWSWWVKAVMIGLTSGF
                     YIVTYFSLPPLLGWPTDAALPERFRLIAVHVQEPNKFTGTEGRIFLWATAIDAPPDSE
                     PRAYRLLFAPTLHERAIEARNKLRKGIPQLGEVDQPALGNLQDAAPLGQESARITFYD
                     PPDPLFPEK"
     gene            complement(1857..>2272)
                     /locus_tag="VE844_02580"
     CDS             complement(1857..>2272)
                     /locus_tag="VE844_02580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007184299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00267.1"
                     /translation="DDIDTWVEDPSGQVVWFRNREAGLIHLDRDDRGLVNDKLTINGQ
                     AIVNPLNQEVVTIRGVVTGEYVVNIHYYARETHQPIPVTVRLDKVNPALEVIYYATTT
                     LEKRGEEQTALRFNIGSDGRITHINTLPKSLVSIS"
BASE COUNT          505 a          562 c          694 g          511 t
ORIGIN      
        1 gacggcacgg tgaagctgtg ggaggtgagc acgggtaggg aactaaccac gcttaagggg
       61 cacgcggacc tcgtttattc agttgcgttt gcgccggatg ggaagacact ggcctcgggg
      121 agcactgacg gcacggtgaa gctgtgggag gtgggcacgg gcagggaatt agccacgctt
      181 aaggggcata gggattgggt ttattcagtt gcgtttgcgc cagacggcaa gacgctgacc
      241 tcggggagtc gggacggcac ggtgaagctg tgggaggtgg gtacgggcag gaaactagcc
      301 acgcttaagg ggcacgtgga ccaggtttat tcagttgcat ttgcgccgga tgggaagaca
      361 cttgtttcag ggaatagcga cggcacggtg aatgtgggag gtgggtacgg gcagggaact
      421 agccacgctc atggggcgcg aatatacggc ttattcagtt acattttcac cagatgggaa
      481 aacgctggcc tcggcgagcg atgatggtac ggtgagatta tatttcgcgg cgacagagga
      541 agagatcgca aggcaaagaa gcaagtgaag gtggcttgag aaataactcc acgtgcgatg
      601 cggatctttg agggtgcaag tgggttatca tacgtcacga ccatagccgt cttaaatcca
      661 taacaaaccc ggggagcaca ggttctcctg agagggtctc cgggtcttcc aaacaacaca
      721 cttcggcaga ggggcggtag atatagattt tcttctcatg aggatcaagc agccagccga
      781 gttgagcgcc attggtaagg tattcctgca tctttgcctg tagcgtttcc agagcgtccg
      841 agcgcgaacg cagttccacg acaaaatctg gacacagcgg aggaaattcc tcttgttctg
      901 cttctgtcag ggactcccag cgagtgcgtt tgacccaggc gagatcgggc gaacgcttgg
      961 cgccgtttgg caacgtaaat cccgtagatg aatcaaagcc tatgccggtg ccgtctcgtg
     1021 ctacccattc gccaaaaatc accgtcagga tgaaattgcg gcgacctgtt tctcccccgg
     1081 tgggcggcat aatgatcaag tctccttcac tcgtgcgttc aatgcgcagg tcttgattca
     1141 attgacagaa ctcaaaaaat tcgtgatcgc tcatcttccg caggagcggc cccaggtgca
     1201 aaataagtgg ttgagtctcg gttaagagtg gcgctgcgct cattggctca cctatttatc
     1261 ctttttctcc tggtggttcg tttaatcttg ttttatttat tggtaggaaa gtgcgatcgg
     1321 taggtaatta tttctccggg aacagcggat cgggcggatc ataaaacgtg atccgagcac
     1381 tctcctggcc caacggggcc gcatcctgca ggttcccgag ggccggttgg tcaacctcac
     1441 caagctgagg gatcccctta cgcagcttgt tgcgagcctc tatagccctt tcgtgtaggg
     1501 tgggagcgaa cagcagccgg taggcacggg gctcgctgtc cgggggggcg tctatagcgg
     1561 tggcccaaag gaatattctg ccttctgtgc cggtgaattt gtttggctcc tgcacatgca
     1621 cggcgatcag acgaaatcgt tcgggcagcg ctgcgtctgt cggccagccg agcaagggtg
     1681 gaagtgagaa ataggtgacg atatagaacc cggaggtaag cccaatcatc accgccttta
     1741 cccaccaaga ccagtttgaa tagaggttaa ggttcaacag caacaaggcc agtactacgt
     1801 aggcggcggt cagtcccagg gcccccaggg taaacatagc tctcagtctt ggtagcttaa
     1861 ctgatgctga ccaagctctt gggcaatgtg ttgatatggg tgatccggcc gtcactgccg
     1921 atattgaaac gcaaggccgt ttgctcctcg ccgcgtttct cgagggtagt ggttgcataa
     1981 tagatcacct cgagtgcggg attgaccttg tcgagccgca ccgtcacggg gatgggttgg
     2041 tgggtctcgc gggcatagta atggatattg accacgtact ccccggtaac caccccgcgg
     2101 atggtcacca cctcttgatt gaggggattg acgatcgcct gaccgttgat ggttaactta
     2161 tcattgacca aaccgcgatc gtcgcgatcc aaatggatga ggccggcctc gcggttccta
     2221 aaccaaacca cttggccgct cggatcttcc acccaggtat cgatatcgtc cg
//
LOCUS       DASQSL010000257         1341 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_165932, whole genome shotgun sequence.
ACCESSION   DASQSL010000257 DASQSL010000000
VERSION     DASQSL010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1341)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1341)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1341
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165932"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..182
                     /locus_tag="VE844_02585"
     CDS             <1..182
                     /locus_tag="VE844_02585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00268.1"
                     /translation="VPHDSYQGVLFFPVEDRHKRDPFFSVVTLFLEGRLKMEVVVTDI
                     ETHQRTHFGPFSVSI"
     gene            529..>1341
                     /locus_tag="VE844_02590"
     CDS             529..>1341
                     /locus_tag="VE844_02590"
                     /inference="COORDINATES: protein motif:HMM:NF022604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2935 domain-containing protein"
                     /protein_id="HZC00269.1"
                     /translation="MQTPLTSKENTPPADLGRRDVLKVGGVVLLGGVVGGCATATEIN
                     PLVPPVAKLVEDTAQTRPTPAEPGAPAGPNLPTLEKPTYVPKASDPFDNSLADNLFWN
                     DIMMEHAMFFVQLMPGPELDGQRKQAEEFQRLFARQLEQSRGLRPDNFVAFNQSSIGL
                     ARRFADWKKTMREAQATGKMRSLVWPLFFTHTAREADRFATRLELYNRRQIELQRGEV
                     VDFWSKTMGEHSGFIAHLLDPDERLLIDQATKLERAFLDKGFRQVSSDNVMKA"
BASE COUNT          310 a          367 c          389 g          275 t
ORIGIN      
        1 ttgtccctca cgatagctat cagggggtgc tgtttttccc ggttgaagac aggcataagc
       61 gggatccttt cttttctgtt gttacactat tcctggaagg acggcttaag atggaggtgg
      121 ttgtcacaga catagaaacc catcagagaa ctcactttgg tccgttttca gtgtccatat
      181 aaaggcttct ttcatgaaat tgataacggt gaccagaagg agctcttact cgcactgcga
      241 gcaacctatg atcggcgcta cagcggagga gggagacgag gacgactaaa cctccatact
      301 ttgacctgcc ggacgaagga gcctgccatt ggcgagccgt tacaagtatg tataacgacc
      361 agcagctcgc tacctgaaat gcctcatata ccactcttga cgatagctcg ggtatgagcg
      421 caaactgctt tcgtgcgcat aaaccacttg catttgcgca ggaacggccc gtttccgagg
      481 gttcggacgc ggcgctgata caactaataa atacaagagg aggctgctat gcaaacccct
      541 ctaacgtcca aagaaaatac tccgccggcg gatctgggcc gacgcgatgt tcttaaagta
      601 ggtggagtag ttctgttggg tggcgtcgta ggcggctgcg ccaccgccac cgaaataaat
      661 ccgctggttc caccggtggc caaactcgtt gaggataccg cccagacgcg gccgacgcct
      721 gccgagccgg gagcccctgc aggaccgaac ctcccgacgc tcgaaaaacc gacgtacgtt
      781 ccgaaagcta gcgatccgtt cgacaactcg ttggcggata acctgttctg gaacgacatc
      841 atgatggaac acgcgatgtt cttcgtgcag ttgatgccgg ggccggagct agatgggcag
      901 cgcaagcagg cggaagagtt ccagcgcctt ttcgcgcgcc agctcgaaca gtcgcgcggc
      961 ttgaggcccg acaacttcgt cgcgttcaac cagagcagca tagggctcgc gaggcggttc
     1021 gccgattgga agaagacgat gcgagaggcc caggcgaccg gcaaaatgcg cagccttgtg
     1081 tggccgttgt tcttcaccca caccgcgcgt gaggccgatc gtttcgcgac gcgtctggag
     1141 ctttacaacc gtcggcagat cgagctgcaa cgcggggaag tcgtcgattt ctggtcgaag
     1201 acgatgggcg agcattcagg attcatcgcg cacctgctcg acccggatga gcggcttctc
     1261 attgatcaag cgaccaagct ggaaagggcg ttcctcgaca agggtttccg ccaggtcagc
     1321 agtgacaacg tcatgaaagc g
//
LOCUS       DASQSL010000258         1094 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_193295, whole genome shotgun sequence.
ACCESSION   DASQSL010000258 DASQSL010000000
VERSION     DASQSL010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193295"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..493
                     /gene="hisB"
                     /locus_tag="VE844_02595"
     CDS             <1..493
                     /gene="hisB"
                     /locus_tag="VE844_02595"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018953646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HZC00270.1"
                     /translation="LPFLDHMLDQVARHGMFDLDIEAQGDLHIDAHHTVEDVGITLGQ
                     AFTKALSDKRGIHRYGHAYVPLDEALSRVVLDCSGRPGLEFQVEFPRARVGDFDVDLF
                     YEFFQGFINHALVTLHIDNLRGRNSHHIIETVFKAFGRALRMAVECDPRMEGILPSTK
                     GSL"
     gene            507..>1094
                     /gene="hisH"
                     /locus_tag="VE844_02600"
     CDS             507..>1094
                     /gene="hisH"
                     /locus_tag="VE844_02600"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004336137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HZC00271.1"
                     /translation="METVVILDYGMSNLRSVAKALEFISSGKQRVLVSGSVADLKRAD
                     RLVFPGQGAIGDCMKHLLALGLATPLQECVRTKPFLGICLGLQSLMHYSEEGNRTTGL
                     GIYEGKVVRFRPDLRDLKTGERLKIPHMGWNQIWPTRSHPLWDGIEPGSRFYFVHSYY
                     VKPTRQDLIVATTDYGGAFTSAIAKDTVFAVQFHPE"
BASE COUNT          223 a          305 c          318 g          248 t
ORIGIN      
        1 cctgcctttt ctcgatcaca tgctggacca ggtggcgcgg catgggatgt tcgaccttga
       61 cattgaagct caaggcgatc tgcacatcga tgcgcatcac accgtcgaag atgtcggaat
      121 tacgctgggc caagccttta ccaaggccct gagcgacaag cgaggtatcc atcgctatgg
      181 acatgcctat gtgccgttag atgaggcgct ctcgcgggtg gtgctcgatt gttccggtcg
      241 gccggggctt gagttccagg tagagttccc gcgtgcgcgg gtaggcgatt ttgatgtcga
      301 tctgttctat gaattcttcc aaggcttcat caaccatgcc ctcgtgaccc tgcacattga
      361 caatctgcgc ggtaggaata gtcatcacat catcgaaacc gtatttaagg cctttggccg
      421 ggctttgcgc atggccgtag aatgcgatcc ccggatggaa gggatcctgc cttcgactaa
      481 aggcagcctg tgagagatgt gcgtttatgg aaacagtggt catcctcgat tacggcatga
      541 gcaacctgcg ctcggtggcg aaggccctgg agtttatttc cagcggcaaa cagcgcgtgc
      601 tggtgagcgg ttccgtagcc gatctcaagc gcgccgatcg gctggtgttt cccggccagg
      661 gcgccattgg cgactgcatg aagcatctgc ttgcgctcgg gctagcgact cccttgcagg
      721 aatgtgttcg gaccaaaccg ttcctcggca tctgcctagg gctacaaagc ctgatgcact
      781 acagtgagga agggaacagg actacgggac tcgggatcta tgagggcaag gtggtgagat
      841 ttcgccccga tctccgcgat ctaaagaccg gtgaacggtt aaagatcccc catatgggct
      901 ggaaccagat ctggcctacc cggagccatc cgctttggga cgggatcgag cctggcagcc
      961 gcttctattt tgttcatagc tactacgtaa agccaacccg gcaggacctc atcgtcgcaa
     1021 ctaccgacta cggtggcgcc tttacctcgg cgattgccaa ggacactgtt ttcgccgtcc
     1081 agttccaccc cgaa
//
LOCUS       DASQSL010000259         1615 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_16314, whole genome shotgun sequence.
ACCESSION   DASQSL010000259 DASQSL010000000
VERSION     DASQSL010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1615
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16314"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(238..1428)
                     /locus_tag="VE844_02605"
     CDS             complement(238..1428)
                     /locus_tag="VE844_02605"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00272.1"
                     /translation="MSQHYPDINSPHFGQKACSTIVELVLEHLPLGIKGSKIDDRLAL
                     DILCYASIKRISIESACMELAGAPGGNTTREPLDAALDPSGEGIRELEAHLNQALKAQ
                     LPKRVCRRIKRRRVEMAADLVEIAYHGQALVDDAEVRRGAAKSGTSHFHMYATLAVVH
                     SKQRSTLALTFVWAGETMEVVLARLITGARELGVRFRRLYCDKGLCSVAVPRMLRQRR
                     VPYLIPSPARGGVDGIKGLFYGRRSYSTRYTFNRGTRAAYTTEVVSVCKYSAGRYGRH
                     RVEYFAYAVYGLGPIEAHQLFELYRRRFGIETSYRQLHQLRARTSSRNPALRLLLVGL
                     ALLIVNLWVLLRRTWVQMTRYGRRVRVVELTLERVANALVDSLKQLLGVVPVFQVTAV
                     LHAT"
BASE COUNT          359 a          491 c          435 g          330 t
ORIGIN      
        1 gccgtattgg gattgatcca actgctccgg atcttggctt cacgcacagc cttgagcatt
       61 ttgagggctt cgcccagtca gtaagggtag gccaagtagt catcttcacc gaagaaacag
      121 gcctcgcggt tgtggtcacg ctggacactg tgtagcggca caccggctag gtgaatgcga
      181 gggcgtcggg gcatgaagcg cagtataccc gaaaaaatca gtagatcacg aaataactta
      241 agtagcatga agtaccgccg tgacttggaa aacgggaaca actccgagca attgcttgag
      301 gctatcgacc aaggcattgg caactcgctc gagcgtcaac tcgactacgc gcacgcgccg
      361 accatagcgg gtcatctgaa cccaggtccg gcgcagcaat acccaaaggt tgacgatgag
      421 cagtgccaac ccgaccaata gcaatcgcaa ggccggattg cgcgaactcg tgcgcgccct
      481 cagctgatgc aattgccgat aactcgtctc gatcccgaag cgccgccggt acaactcaaa
      541 gagttgatgc gcctcgatcg gtcccaagcc gtagacggcg taggcgaagt actcgacccg
      601 gtgtcgccca tagcgccccg cgctgtattt gcagacgctg accacctcgg tggtgtaagc
      661 cgctcgcgtg ccgcgattga acgtgtagcg cgtcgaataa ctgcgccgcc cataaaacaa
      721 gcctttgata ccgtctacgc cgccccgcgc cgggctcggg atgaggtaag gcacacgccg
      781 ctgcctgagc attcgcggca ccgcgaccga gcacaagcct ttgtcgcagt agagccgcct
      841 aaagcgcact ccaagttcgc gcgcccccgt gatcaggcgc gccagcacaa cttccatcgt
      901 ttcaccggcc caaacaaagg tcagtgccag ggtggagcgt tgcttgctgt gaaccacagc
      961 caaggtggca tacatatgaa agtggctcgt gccgctcttg gccgctccac gccgcacttc
     1021 agcgtcatcc accagtgctt gcccgtgata agcgatctca accagatcgg cggccatctc
     1081 gacacgtcgc ctcttgatcc ggcggcagac ccttttgggc aattgcgctt tgagggcttg
     1141 gttcaggtgc gcctccaact cgcgtatccc ctcgcccgag ggatcgagcg cggcatccaa
     1201 gggctcgcgc gtggtattgc ccccgggggc accggccaac tccatacagg cactctcaat
     1261 cgagatacgc ttgatcgagg cgtaacagag aatgtccaaa gccaatcggt catcaatttt
     1321 gctcccctta atgccaagtg gcaggtgctc aagaaccaac tcaacgatgg tggagcacgc
     1381 tttctgccca aagtgagggc tgttaatgtc agggtaatgc tgactcatct atgacctctc
     1441 cagataattc cgtaatggga gatcatggca tagtcagtgt cttgcttatg gttacttatt
     1501 catcatttcg tgatctactg atacccgaaa tccgcgttgc tcaagccatg cgcttcgctg
     1561 ttggtcgtaa tcccgttgtc caacatgctg ccccctccac ttcaatgacc agtct
//
LOCUS       DASQSL010000260         1878 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_153210, whole genome shotgun sequence.
ACCESSION   DASQSL010000260 DASQSL010000000
VERSION     DASQSL010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1878
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153210"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(58..1074)
                     /gene="gap"
                     /locus_tag="VE844_02610"
     CDS             complement(58..1074)
                     /gene="gap"
                     /locus_tag="VE844_02610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011883251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0019682 - glyceraldehyde-3-phosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HZC00273.1"
                     /translation="MVVTIGINGYGRIGRNILRALYESRRTHELRIVAVNDLGDAAIN
                     AHLTQYDTIHGRFPGEVSVEGEHMIVNGDKIRVLSERDPAKLPWGELGVDVVHECTGL
                     FTTKEKANAHLKGGARKVIISAPGGEDVDATIVYGVNHSILRTSHTVISNASCTTNCL
                     VPLVKPLHEHIGIVSGIMTTIHAHTNDQVLIDTYHKDLRRARSATQSLIPTKTGAAVA
                     VGLVLPELKGRLDGLAIRVPTVNVSLVDLSFIAARETRKEEIDAIMKAASEDMLQGLL
                     EYTDKPLVSIDFNHNPASAIYDATETRVLNGTLVKVLAWYDNKWGFSNRMLDTTLALM
                     NARE"
     gene            complement(1100..>1878)
                     /locus_tag="VE844_02615"
     CDS             complement(1100..>1878)
                     /locus_tag="VE844_02615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012729472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HZC00274.1"
                     /translation="YGVREFAMTAIMNGIALHGGFIPYGGTFLVFSDYARNAVRMAAL
                     IGAPVVLVYTHDSIGLGEDGPTHQAVEHAASLRLIPNMSVWRPADAVETAVAWKAAIE
                     RKGGPTALLLSRQALDPQDRTPEQLANINRGGYVLLACEGPPEVIILATGSELGLAVA
                     AATELNRAGRRVRVVSMPCTDRFEAQDESYRRTVLPPEVRKRLAIEAGVRDYWYKYVG
                     LDGRLLGLTRFGESAPGEAVFRHLGFTVEQVIETVNEMYK"
BASE COUNT          392 a          585 c          519 g          382 t
ORIGIN      
        1 tcagttgttg gggttcgcag ggctcacccc aacctaccat gcttgcagcc cgaactctca
       61 ttccctggca ttcatcagcg cgagggtcgt atccagcatc cgattggaga acccccactt
      121 gttatcgtac caggccaata ccttgaccag cgtaccgttt aacacccggg tctcagtcgc
      181 atcgtagata gcggaggccg gattgtggtt gaaatcgata gacactaagg gcttatcagt
      241 gtattcgagc aggccctgca gcatgtcctc tgaggccgct ttcatgatcg catcgatctc
      301 ctctttacgg gtctcccgcg ccgctatgaa gctcagatcc accagcgaga cattgaccgt
      361 cggcacccgt atggcaaggc cgtcgagcct gcccttgagc tcgggcagga ccaggcccac
      421 cgcaaccgcc gcccccgtct tggtcgggat cagcgattgg gtagccgagc gcgcccgccg
      481 cagatccttg tggtaggtgt cgatcaacac ctgatcgttg gtatgggcat ggatcgtcgt
      541 catgatcccg ctgacgatac cgatatgctc gtgcaagggc ttgaccaggg gcaccaggca
      601 attggttgtg cacgaggcat tcgagatcac cgtatgcgag gtcctgagga tagaatgatt
      661 gacgccatag acaatggtcg cgtccacatc ctcaccgccc ggggccgaga tgatgacctt
      721 cctggcacca cctttgagat gagcgttggc cttctcttta gtggtaaaga ggccggtgca
      781 ttcatggact acatcaacgc ccagctcacc ccagggaagt ttagccggat cccgctcgga
      841 cagtacccgg atcttatcgc cattgacaat catgtgctcg ccttcgaccg agacctcgcc
      901 cggaaatcgg ccatgaatgg tgtcgtattg agtgagatgg gcgttgatag ccgcatctcc
      961 gagatcgttg acagctacga tcctcagctc gtgggtgcgt ctcgattcgt acagggcacg
     1021 cagtatgttg cggccgatcc ggccatagcc gttgatgcca atagttacca ccatgcttta
     1081 agctctccaa ggtatcgctt tacttataca tctcattgac ggtctcgatc acctgctcca
     1141 cggtaaaccc caaatgccgg aacacggcct cgccgggcgc cgattcgcca aagcgggtca
     1201 atcccaagag cctgccatcg agccccacat acttgtacca ataatccctg acgcccgcct
     1261 cgatggcaag ccgcttgcgc acctcgggcg gcagcacggt acgccgatag ctctcgtctt
     1321 gggcctcgaa tctatcggtg cagggcatgg ataccacccg cacacgcctg cccgcccgat
     1381 tgagctcggt agctgccgcc accgcgagac cgagctctga cccggtggcc aggataatga
     1441 cttcaggcgg accctcacag gccagcagca catagccccc gcggttgatg ttcgctaact
     1501 gctcgggcgt tctatcctga ggatcgagcg cttggcggga caagagcaag gcggtgggac
     1561 cccctttgcg ctcgatagcg gctttccagg ccacggcagt ctctaccgca tcagcgggac
     1621 gccataccga catattgggg atcaggcgca ggctcgcggc atgttcgacg gcttgatggg
     1681 tagggccatc ctcgcccaga ccgatagaat catgggtata gaccaagacc accggcgcac
     1741 ctatgagcgc ggccatcctc acggcattac gggcatagtc agagaatacc aaaaaggtgc
     1801 ccccataggg aataaaaccg ccatgcagag cgatcccatt catgatcgcg gtcatcgcga
     1861 actcgcggac gccgtaat
//
LOCUS       DASQSL010000261         1312 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_165942, whole genome shotgun sequence.
ACCESSION   DASQSL010000261 DASQSL010000000
VERSION     DASQSL010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1312)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1312)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1312
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165942"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..717
                     /locus_tag="VE844_02620"
     CDS             <1..717
                     /locus_tag="VE844_02620"
                     /inference="COORDINATES: protein motif:HMM:TIGR01494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HZC00275.1"
                     /translation="VEGSLIHVGSQRFMTLKGISLERAAGNLREIDQAAAAPIYVAID
                     GELRGLLLLADPLRPEAAAVIRALRARGMREIVMLTGDHAPVAKAVATTLGIERYVAE
                     ALPDQKAELVRTLQAEGRTVAVVGDGINDSPALAQADVGIAVRGGAEVAQETAHVMML
                     EGNLWKIPQAIDIARESMHLIEQNWNLIFYPNTAAIAFSLLGMIGPVGATLISNGSAV
                     IAAGNALRPLLDSQSLRSEL"
     gene            complement(701..1072)
                     /locus_tag="VE844_02625"
     CDS             complement(701..1072)
                     /locus_tag="VE844_02625"
                     /inference="COORDINATES: protein motif:HMM:NF040096.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00276.1"
                     /translation="MQLTSTYVHALKGRLRIKVSGVKGSPAKALEIEGRLQAMAGVNH
                     VKANPTTGNVLILYYPDRIGQQEVIGALQRLGCLHAYSTSPVVVASHNPVLRGVADRL
                     VETLVHSTVELALQRLVTALI"
BASE COUNT          295 a          382 c          369 g          266 t
ORIGIN      
        1 gtcgaagggt cgctcatcca cgtgggcagt caacgtttca tgaccctcaa ggggatctcc
       61 ctcgagaggg cagccgggaa cctgcgcgag atcgatcaag ccgctgccgc acccatctac
      121 gtcgcgatcg atggggaatt acggggctta ctgctgttag ccgacccctt gcggcccgag
      181 gctgcagcgg tgatccgggc cttacgagcc cgaggcatgc gggagatcgt gatgctcaca
      241 ggggaccacg caccggtcgc caaagccgtg gccacgacct tgggaatcga gcgctacgtc
      301 gctgaggcct tgccagacca gaaggccgaa ctcgtccgca cgctccaggc cgaagggcga
      361 acggtcgcag tggtggggga tggcatcaac gactcgccag cgctggccca agccgacgtc
      421 ggcattgcgg tgcgcggcgg ggcagaagtg gcacaggaaa cggcccatgt gatgatgcta
      481 gaaggcaacc tctggaaaat cccgcaggcc attgatatcg cgcgcgagtc gatgcatctc
      541 atcgagcaga attggaacct gattttctac ccaaacacgg ccgccattgc cttctctctc
      601 ttggggatga tcggccccgt cggggcaacg ctgatcagta atggctcggc cgtcattgcc
      661 gccggaaacg cgctgaggcc cttactcgac agccagtccc tcagatcaga gctgtgacga
      721 gcctttgcag ggctaactcc actgtggagt gaacgagcgt ctcaaccagc ctatcagcaa
      781 caccacgcaa cacggggtta tggcttgcca ccactaccgg agaagtgcta tacgcatgca
      841 gacaccccag acgctgcagc gcaccgataa cctcctgttg tccgatccga tctggatagt
      901 acaggatcaa aacattgcca gtggtcggat tcgctttgac gtggttgacc cccgccattg
      961 cttgcagccg cccctcgatt tccagcgctt ttgcgggtga acctttcacg ccgctcacct
     1021 taatccgtaa ccgccccttg agtgcatgga cgtatgtgga tgtaagctgc acgggattag
     1081 cccttcctgt gaagagtttg ccgccctcga ttactcaagg actttttaca acaaagcatt
     1141 aatcttacca ccattaaacg gttcaaatag aaatcatcta gcgttagata atatgcaggc
     1201 agcaaattgc tagcagatgg cgaaaatgtt aaatatgtgt aaatttttat ctagagcggt
     1261 ttgcagttgc attcagggca ggcatagcct agcctgcgcg gatatgaaag cc
//
LOCUS       DASQSL010000262         1105 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_70756, whole genome shotgun sequence.
ACCESSION   DASQSL010000262 DASQSL010000000
VERSION     DASQSL010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1105
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70756"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..288)
                     /locus_tag="VE844_02630"
     CDS             complement(<1..288)
                     /locus_tag="VE844_02630"
                     /inference="COORDINATES: protein motif:HMM:NF024313.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC00277.1"
                     /translation="METFQRLLRNKTAAFGMIVVFSVFVIAALADVLAPYGYDEMYPE
                     QMLQMPSWQYPFGTDQMGRDVLSRVLHGSRISIYVGFVSTLLGACIGIPLGI"
     gene            complement(325..>1105)
                     /locus_tag="VE844_02635"
     CDS             complement(325..>1105)
                     /locus_tag="VE844_02635"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC00278.1"
                     /translation="PIILQYAKWLVHILQGDWGMSFFSRQPVFTEVMEKLLVSLQLIA
                     FAMFFALLIAIPSGVIAAAKAHGKWDYGAMTFALFGVSIPEFFLGILLFLTFGLTLGW
                     LPVQGYVAPHEDLLENLRHMILPAIALGSSRAAILTRLVRGSMLEVIRQEYVTTARAK
                     GLRETVVIAKHALKNALIPAVTVMGLQVGFMVGGTIIIEKLFAIPGLGSYGIDAITNR
                     DYTQVQGFILVSAAVFVAANLCVDFIYCFLDPRIRYGSAEA"
BASE COUNT          274 a          336 c          299 g          196 t
ORIGIN      
        1 gatgccaagc ggaataccga tgcaggcgcc gagcagggtc gacacaaagc cgacgtagat
       61 ggaaatccga ctgccgtgca agacccgact caacacgtcg cgtcccattt gatcggtccc
      121 aaacggatac tgccagctcg gcatttgcag catctgctcg ggatacatct catcgtagcc
      181 gtatggcgcg agcacatcgg caagagccgc gatgacgaac acgctaaaga ccacaatcat
      241 accgaatgcc gctgtcttgt tgcgcagaag acgctgaaac gtctccatcc cactttcctt
      301 ctacccgtgc ctacctgcga tcccttaggc ctctgccgag ccatagcgaa tgcgtggatc
      361 gaggaagcaa tatataaaat ccacacacaa attggccgct acaaacaccg ccgccgacac
      421 cagaataaag ccctggacct gggtgtaatc gcggttggta atggcgtcga tgccataact
      481 ccccagtcct ggaatggcga agagcttttc gatgatgatt gtaccgccca ccatgaaccc
      541 cacttgcaag cccatcaccg tcacggctgg gatcagcgcg tttttcagcg catgtttggc
      601 gatcacgacc gtttcccgca agcccttggc gcgggcagtg gtgacgtact cctgtcgaat
      661 gacttccagc atgctgccgc gcacgagacg cgtcagaatg gccgcccggc tcgagcccag
      721 ggcgatggcc ggcaggatca tgtggcgcaa gttctccagc agatcctcat gcggcgccac
      781 atagccctgt accggcaacc agccaagcgt caacccgaag gtcagaaaga gcaagatgcc
      841 caggaaaaac tcgggaatcg acacgccgaa gagcgcaaag gtcatggccc cgtagtccca
      901 tttgccatgc gctttggcag cggcgatcac ccctgacggg atggcgatga gcagggcgaa
      961 gaacatggca aaagcgatca gttgtaaact gaccaggagc ttctccatga cttccgtaaa
     1021 cacgggctgg cgcgagaaga acgacatgcc ccaatcccct tgcagaatgt ggacgagcca
     1081 tttggcatac tgcaagatga tgggc
//
LOCUS       DASQSL010000263         2215 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_153233, whole genome shotgun sequence.
ACCESSION   DASQSL010000263 DASQSL010000000
VERSION     DASQSL010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2215
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153233"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..173
                     /locus_tag="VE844_02640"
     CDS             <1..173
                     /locus_tag="VE844_02640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004118778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HZC00279.1"
                     /translation="EQYHRVERVFGAFRRSFVLPALVDADKAEATFKDGVLELKLPKA
                     EQAKPKRIGITA"
     gene            complement(230..1053)
                     /locus_tag="VE844_02645"
     CDS             complement(join(230..657,657..1053))
                     /locus_tag="VE844_02645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612298.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZC00280.1"
                     /translation="MDTTAQPTIWEVPDDVWTLIEPMLNAWYPAKPKGHRRVDLRRVL
                     NGIIFRLRTGCQWNQLPKQFGDDSTVHRHFQPWCQRGIMARLWAMLVEGCDELGGVDW
                     QWQAADTAMGKARRGGDLVGCNPTDRGKKGLKRSLVVEARGGPLGAAIAGANVHDTKR
                     LAATLGAIVGERPQPTEEWPQHLCLDKGYDNPTGHETVTAYQYTPHIRRIGEEKRAPH
                     GQKTYPARRWVVERTLAWLSKCRGLLVRYEKKAVNFFGLLQLACALIWMRRRARLL"
     gene            1404..1991
                     /locus_tag="VE844_02650"
     CDS             1404..1991
                     /locus_tag="VE844_02650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002731229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HZC00281.1"
                     /translation="MAQAKGGVGKSTAAIHIAAYFQALAPTLLVDSDHVRAALAWSRR
                     GKLPFTVVDENQQAKAMRERRYDHIVFDTPGSIDEQGLQELAAGCDLMIIPTVPEASA
                     TDGLLYTLSRLQGKADNFRVLLNRVKHNRPQEAIDLRAALTGMGVKVFAAEIPDLVAF
                     DKASAQGVPVYKVDDRRAARAWEAFESLGEEIRHG"
     gene            1984..>2215
                     /locus_tag="VE844_02655"
     CDS             1984..>2215
                     /locus_tag="VE844_02655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00282.1"
                     /translation="MAENKYARMAQIAQQYQATEPDSDVDILPAKVGRPKGKSSNPDY
                     ERLTVLVRKQTRKTAQRLWEDLEPKKDMSDLVE"
BASE COUNT          487 a          617 c          649 g          462 t
ORIGIN      
        1 aagagcagta tcaccgggtg gagcgggtgt ttggcgcttt ccggcgttcc ttcgtgttgc
       61 cggcgttagt cgacgccgac aaggcagaag ccacctttaa agacggtgtg ctggaactta
      121 aactgcccaa ggccgagcag gccaaaccga agcgcatcgg cattaccgct taactcctca
      181 cgtacccatt taccggtgta gatgggtact cccttagaaa ctatctcaat caaaggagtc
      241 gtgcccggcg tcgcatccag atcagggcac aggccagttg gagcaggccg aagaaattga
      301 cggccttttt ctcataccgg acgaggagac cccggcactt ggagagccac gccagcgtcc
      361 gttctaccac ccagcggcgc gctggatagg tcttctggcc atgaggagcg cgcttttcct
      421 cgccgatgcg ccggatatgc ggagtgtact gatatgctgt cacggtctca tgcccagtcg
      481 gattgtcata gcccttgtcc aggcagaggt gctgcggcca ctcctcggtc ggctggggac
      541 gctcccccac gatggccccc agggtggcgg ctaaccgctt cgtgtcgtgg acgttggccc
      601 cagcaatggc ggcgcccagg gggccgcccc tcgcttccac cacgaggctc cgtttcaccc
      661 ctttttacca cggtccgtgg gattacagcc gaccaggtct ccgcccctcc gcgctttgcc
      721 catggcggtg tcggcggctt gccactgcca gtcaaccccg cccaactcgt cacagccctc
      781 aaccagcatg gcccagaggc gcgccatgat gccgcgttgg caccacggct ggaagtgccg
      841 gtgcaccgtg ctgtcgtcgc caaactgctt gggcagctga ttccattggc agcccgtgcg
      901 cagccggaaa atgatgccat tcaatacccg gcgcagatcc acgcggcgat gccctttggg
      961 cttggcgggg taccacgcgt tgagcatcgg ctcgatcaat gtccagacgt catcaggaac
     1021 ttcccagatg gttggttgag cggttgtgtc catgataacc ctccctgttt gtacaacaca
     1081 ggggagttgt cgtcggaccg actattttga ttgagatagt ttgttagtgg taaaatccca
     1141 agccgttgat attgctgagg ttattagaga ccacagcagg tgacgaaacg tcgtccacag
     1201 gtcgtgtagt cacaggacat cacgaggtga gctgctctca acattcgaga cccattggtc
     1261 taccactaaa tccgatggaa tgcgaaagtt cttgcatacc acgattttgt gtgactataa
     1321 tcataatata ttgctatgac gttattagag aataacgagc atataataac ctgaaatatt
     1381 aggcaaatat tatgatagtc accttggccc aagcgaaggg cggggttggc aaaagtacgg
     1441 cggccattca tatcgccgcc tattttcagg cactcgcccc aacgttactt gtcgatagcg
     1501 atcatgtgcg cgcagcgctg gcctggagcc gccgcggcaa acttcccttc acagttgttg
     1561 atgaaaacca gcaagcgaaa gctatgcggg agcggcgcta cgaccatatt gtgttcgata
     1621 cgccgggctc gatcgacgaa cagggattac aggaactcgc tgccgggtgc gaccttatga
     1681 tcatcccgac tgtgccggaa gcttctgcga cggatggact gctttacacg ctgagccgct
     1741 tgcaaggtaa ggctgataat tttcgcgtct tgctgaatcg ggtcaagcac aacaggccgc
     1801 aggaagccat tgatctacgc gccgcgctca ccgggatggg cgtgaaggtt tttgcggccg
     1861 agattcccga cctggtggcg ttcgataaag cgagcgcgca aggcgtgccg gtttacaagg
     1921 tcgatgatag gcgcgcagcg agggcatggg aagcgtttga gtcattgggg gaggaaatcc
     1981 gccatggctg agaacaaata tgcccgcatg gcccaaatcg cgcagcaata tcaggcgacg
     2041 gagccggaca gcgatgtcga tatattgccg gctaaggtcg ggcggccaaa aggcaagagc
     2101 agcaatccgg attatgagcg attgacggtc ctggtgcgca aacagacgcg caaaacagca
     2161 cagcggctct gggaggattt ggagccgaaa aaggatatgt ccgatctggt cgaaa
//
LOCUS       DASQSL010000264         1070 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_193319, whole genome shotgun sequence.
ACCESSION   DASQSL010000264 DASQSL010000000
VERSION     DASQSL010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193319"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(131..478)
                     /locus_tag="VE844_02660"
     CDS             complement(131..478)
                     /locus_tag="VE844_02660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00283.1"
                     /translation="MPKGMPIEEAFRDVKSTRLGLSLEFHRTYQVERLQILLLVATLA
                     LMVAWLMGKATELTGQHRHYQANTVRDRIVLSTIFIGLKVIDDPRLTLRLADLLAAIN
                     CLDELIRNHCLSE"
     gene            complement(471..>1070)
                     /locus_tag="VE844_02665"
     CDS             complement(471..>1070)
                     /locus_tag="VE844_02665"
                     /inference="COORDINATES: protein motif:HMM:NF033591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC00284.1"
                     /translation="NKLRPVIIVDWSDLDECKRHFLLRTSVPVNGRSLSLYEEVHTLK
                     SKEKPKTHQHFLQTLKRLLPPTCRPILLTDAGFRTPWFKQVEALGGDWVGRIRNRHEV
                     QLPDGEDWLPCKTLYNQATSTPKALGRAHLTQSNPIACQLVLYKGKPKGRVHLNRLGQ
                     RAHSAHSRKHEKAQREPWLLGTSLPQGFKLAQKGVKLYA"
BASE COUNT          220 a          285 c          319 g          246 t
ORIGIN      
        1 catcatctta ttccgtcccc caacttcggg tcgaagcgca gtcctggatt ttgtccgcct
       61 gggtaggacg ggtaattagc gcgaaaaggc acgcgaaaag gggtcagacc ctgtggtatc
      121 cccacgaatt ttactctgat aggcagtggt ttcggataag ttcatcgagg caattgatgg
      181 ccgcgagcag gtccgccaat cgtaaggtca gccgcgggtc atcgatgact ttaagaccga
      241 tgaagatcgt cgaaagcacg atgcggtcgc ggacggtgtt ggcttgataa tggcgatgct
      301 gtccggtgag ctcggtggcc ttgcccatca gccaggccac catgagcgcc agtgtcgcga
      361 cgagcaagag gatctgcagg cgttcgactt gataggtgcg atggaattcg aggctcaggc
      421 ccaagcgggt actctttaca tcccgaaagg cttcttcgat tggcatgcct ttaggcatag
      481 agcttgaccc ctttctgtgc gagcttgaag ccctggggca gggaggtgcc caaaagccaa
      541 ggctcgcgtt gggccttctc gtgtttgcgg ctgtgcgccg agtgtgcgcg ttgtcctaaa
      601 cgattaagat ggacacggcc tttgggttta cccttataca gcaccaactg acaggcgata
      661 gggttgctct gcgtcaagtg tgctctgccc agtgccttcg gcgtggaagt ggcctgattg
      721 tataaggtct tacaaggcag ccaatcttcc ccgtctggca gttgcacctc gtggcgattg
      781 cgaatgcgcc caacccagtc ccctcccagc gcttcgacct gcttgaacca cggggtacgg
      841 aaccccgcat cggtcagcag aatcggacga caagtgggcg ggagcaggcg tttcaatgtc
      901 tggagaaagt gctgatgggt cttaggcttc tccttgctct ttagtgtgtg cacctcttcg
      961 tataagctca gcgaccgacc gttgaccggc accgaggtgc gcaagagaaa atgccgtttg
     1021 cattcatcca ggtcagacca atcaacaatg atgaccggcc gtagcttgtt
//
LOCUS       DASQSL010000265         1613 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_111105, whole genome shotgun sequence.
ACCESSION   DASQSL010000265 DASQSL010000000
VERSION     DASQSL010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1613
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111105"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..749)
                     /gene="dapB"
                     /locus_tag="VE844_02670"
     CDS             complement(<1..749)
                     /gene="dapB"
                     /locus_tag="VE844_02670"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018953507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HZC00285.1"
                     /translation="MGCAIVEACRALEESVVLTAAIEREGSPTIGADVGELAGIGPLG
                     VKVTDRLAVLTKAFDVLIDFSQPEATLAHLAICRQAKRRMVIGTTGIALEGRAMIQAA
                     AHECAIVWSPNMSIGVNLCFKLLELTARVLGDEVDIEVIEAHHRHKRDAPSGTALRMG
                     EIVAETLGRDLKQCAVYGRQGATGERDSKTIGFETIRAGDIVGEHTVMFAGIGERVEI
                     AHKASSRLTFARGALRAASWVMQQERGLFDM"
     gene            complement(797..>1613)
                     /locus_tag="VE844_02675"
     CDS             complement(797..>1613)
                     /locus_tag="VE844_02675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003095211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HZC00286.1"
                     /translation="SESHGGARVHRGADQSYDLELSLEEAVSGTTVKIRVPTQVICQT
                     CKGTGARGGAAPTSCSTCGGYGQVRMQQGFFSIQQTCPRCHGTGKMIRDPCSSCHGQG
                     RVRDYKTLSATIPAGVDNGDRIRLTGEGEVGQQGGPSGDLYVNIHVKKHPIFTREEAD
                     LYCEVPISIVTAALGGELEVPTLDGRVTLKIPPETQTGKLFRIRGKGVKPVRGVHTGD
                     LLCRITVETPVSLSPRQKELLQEFERTLHAGGGQHNPKANSWLDGVKRFFEGI"
BASE COUNT          315 a          550 c          421 g          327 t
ORIGIN      
        1 tgcatatcaa acagaccccg ctcctgttgc atcacccaag aggctgctcg gagcgcaccc
       61 cgggcaaagg tcaaccggct tgaggcctta tgagcgatct ccacccgctc cccgatcccg
      121 gcgaacatca ccgtatgttc accgacaata tcgcccgccc gaatggtctc aaaaccaatc
      181 gtcttgctat cacgttcccc ggtcgcgcct tgccggccat acaccgcgca ttgcttgaga
      241 tcgcgcccca gggtctccgc tacgatctct cccatccgta acgctgtccc cgagggtgca
      301 tcccgtttat ggcgatggtg cgcttcgatc acctcgatgt cgacctcatc acccagtacc
      361 cgggcggtga gctccaagag cttgaagcac agattcacgc cgatgctcat attgggcgac
      421 cagacgatgg cacactcatg ggccgccgcc tggatcatcg ctcgcccctc cagagcgatc
      481 cccgtggtac cgatcaccat ccgccgttta gcttggcgac agatagccag atgcgcaagg
      541 gtagcctccg gctggctgaa atcgatcagg acgtcaaacg ctttggtgag cactgcgagc
      601 cggtccgtga ccttcacgcc gagcggacct atacccgcga gctcgccgac atctgctccg
      661 atcgtcggcg atccctcccg ctcaatggcg gccgtaagga caacactctc ctctagagcc
      721 cggcaggcct ccactatcgc gcaccccatt ctccctgccg cccccgtgag ggccacgcga
      781 acggctttat tcaaagctat atcccctcga aaaatcgctt gaccccatcc agccacgagt
      841 tcgctttcgg gttgtgttgg ccgccaccgg catgtagggt gcgctcaaat tcctgcaaca
      901 attccttttg ccggggactg agactaaccg gggtttcgac cgtaatacgg cagagcagat
      961 caccggtatg gacacctcgc accggtttaa cacccttccc gcggatacgg aatagcttgc
     1021 cggtctgggt ttcaggcggg atctttaatg tcacccgtcc gtccaaggtc gggacctcca
     1081 attcgccacc caaggccgcc gtgacgatgc taatgggaac ctcacagtag agatcagcct
     1141 cttcccgcgt aaagataggg tgtttcttga catgaatatt aacgtaaaga tcaccggatg
     1201 ggccaccctg ttggcccacc tccccctcac ctgttaaccg gatccgatcg ccgttatcaa
     1261 ccccggcggg gatcgtggcc gagagggttt tatagtcgcg caccctgccc tgaccatgac
     1321 aggagctgca cggatcgcgg atcatcttac cggtgccatg gcagcgcggg caggtctgct
     1381 gtatggagaa gaatccttgc tgcatgcgca cctgcccata acctccgcag gtcgaacagc
     1441 tggtcggggc agcccctcca cgtgccccgg tacccttgca ggtctggcag atcacctggg
     1501 tgggcactcg gatcttgacg gttgttccag acaccgcctc ttcgaggctc aattcaagat
     1561 cgtaactttg atccgccccc cgatggaccc gtgcgccacc gtgcgactcg ctg
//
LOCUS       DASQSL010000266         1220 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_16364, whole genome shotgun sequence.
ACCESSION   DASQSL010000266 DASQSL010000000
VERSION     DASQSL010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1220
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16364"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..388
                     /locus_tag="VE844_02680"
     CDS             <1..388
                     /locus_tag="VE844_02680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00287.1"
                     /translation="GSSSHSSCPKPQMAATMFAQHYERRSPLPAEDNRSGAQASLGKP
                     PADHYSLDTLAKELASESVSRGQALRMIGSALAGAALAVFIPGVARGQQDGPVDHGPN
                     GPVDHGPQGPVNHGPQGPVDHGPKDR"
     gene            1029..>1220
                     /locus_tag="VE844_02685"
     CDS             1029..>1220
                     /locus_tag="VE844_02685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00288.1"
                     /translation="MPENFTAPIAEARRAQDIGTANDALPYYEGIMAGEPDALVRSFA
                     ARQPILDDHRVGSVEGARRL"
BASE COUNT          280 a          333 c          374 g          233 t
ORIGIN      
        1 aggctctagt agccatagta gttgcccaaa gcctcagatg gcggctacca tgttcgcaca
       61 acactacgaa aggagaagcc ccttgccagc cgaagacaac cgcagcggag cacaagctag
      121 cctaggcaaa ccaccggcag accattactc cctggacacc ttggccaaag agttggctag
      181 cgagagcgtt tcgcgcgggc aggcgctgag gatgataggg agcgctttgg cgggggctgc
      241 attagctgtg tttatccctg gggttgctcg gggccagcaa gatggaccgg tggaccacgg
      301 ccccaacgga ccggtggacc atggccccca aggaccggtg aaccatggcc cccaaggacc
      361 cgtagaccac ggccccaagg accggtgaag aatggaggaa caggcacctg tggaggtgag
      421 gtctgctccg atgacaacga atgcggggcg ggttgtaaat gcgcctgtcc ccacgctggg
      481 attggatatt ggacctgctg ctgacgccct gaggggatca tcaccgcaac cgggacaact
      541 agcggtctgt cattgacgga tcggaaggtg aaatatagag cttgcctgaa tgaaacggtg
      601 ctcgatacta gcgagagcat cctggtttac agcggcggat tggtagaggc tcgtgaccct
      661 aataaaggcg agatgatctt cggcttcccg ggactttggc gctcgtcatc aaggcatggt
      721 gggcagcgat cgttaggggc tcactttttc ttgaggagcc ttacctgttc acgggtgaga
      781 tagccgacta aggaggggag acctcaggcc accgctccct ctacaaacca agttttcagt
      841 gcatcgccga ctttcaatca atgccttata acgatccggt taagagtgat taaagacgga
      901 cccgggctat gcaggatatc ggacatggac ttctgagaat tcctgttcca cgcacttcgg
      961 tgaatagcgt aggctttgtg gaatcgtgcg cagaacgtaa gcctgtagag gaggttccaa
     1021 tgccctggat gccggagaac tttacagccc ctatagccga agctcgacgt gcacaggaca
     1081 taggaactgc caacgacgcc cttccttatt acgaagggat catggccggc gaacccgacg
     1141 cgctcgtgcg ctccttcgcc gcacggcagc ccatcttgga cgaccaccgc gtcggctctg
     1201 tggagggcgc gagaaggctg
//
LOCUS       DASQSL010000267         1603 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_43324, whole genome shotgun sequence.
ACCESSION   DASQSL010000267 DASQSL010000000
VERSION     DASQSL010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1603
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43324"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1515)
                     /locus_tag="VE844_02690"
     CDS             complement(<1..1515)
                     /locus_tag="VE844_02690"
                     /inference="COORDINATES: protein motif:HMM:NF033559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC00289.1"
                     /translation="MNEKPTIITERVDDIPLLLAQMDRMGLAEVLDAHFPTHGNWRGL
                     SFGRVTTIWLSSILSRGDHRLVHVEPWVAQRQMMLSQATGEVVRAHELSDDRLEIVLR
                     RLSNDQGWVSFESALNQHLVRVYDLQAERVHVDSTSASAYASVSDEGLFQFGHSKDHR
                     PDLPQVKVMQAVLDPLGMPLVTDVVSGERADDPLYIPCIERVQASLGRSGLLYVGDCK
                     MASRQTRAWIAAQGAYYLCPLSQVQLSAGELAEAVESALRGDVELCAVYREVDDGQAE
                     RIAQGYERQVPMVLDVAGESQSWMERRFVVQSLRHAKASEASLRARVAKAQTQVEALN
                     RRGRGRKCFEEIDDLRQAVNAIVQRHQVEDFLWLRYDQPCTSRPVRAYRNRAAGMKVD
                     RHATVEVRVDEEALAAAVSRFGWRVYGTNQPREQLSLEQAVLAYRSEYLVERSLGRLK
                     GRPLSLTPMYVQRDDHATGLIRLLSIALRVLTLMEFVGRRHLALEQNKMAGLYAG"
BASE COUNT          352 a          536 c          416 g          299 t
ORIGIN      
        1 acccgcatag agcccagcca ttttgttctg ctccaaagcc aggtggcgac gtcccacaaa
       61 ctccattaga gtcaacacgc gcaaggcgat cgacaacaag cgaatgagcc cagtggcatg
      121 gtcgtctcgc tgcacataca tcggcgtcag cgatagcgga cgccctttga gccgccctaa
      181 acttcgctcc accaggtatt cactacggta cgccagcacg gcttgctcaa gggacaactg
      241 ctcacgcggt tgattcgtcc cgtacacgcg ccagccaaac cgactcaccg cggcggcaag
      301 tgcctcctcg tccacccgca cttccaccgt ggcgtggcgg tccaccttca tccccgccgc
      361 acgattgcgg taggctcgca ccgggcgcga cgtgcacggt tgatcgtagc gcaaccacaa
      421 gaagtcctcc acttgatggc gctgtacaat cgcgttgacg gcttgacgca ggtcgtcgat
      481 ctcttcaaaa catttgcgac ctcggccgcg ccggttgagc gcttccactt gagtttgcgc
      541 tttcgccact cgggcgcgaa gagacgcctc tgaggccttg gcatggcgca gggactgcac
      601 cacaaagcga cgctccatcc aactctggct ctcgcccgcc acgtcgagga ccatgggcac
      661 ctgacgctca tagccttggg caatacgttc agcttggccg tcgtcgacct ctcgatacac
      721 cgcacagagc tcgacgtcac cccgcaaggc agactcgacc gcctctgcca actcccccgc
      781 actcagttgg acctgagaca ggggacacaa gtagtaagcc ccctgagccg caatccacgc
      841 gcgggtctga cgggaggcca tcttgcagtc gcccacatac aataagccgc tgcggcctaa
      901 actggcctgc acgcgctcga tgcacggaat atagagcggg tcatcggccc gctcacccga
      961 gaccacatcg gtgacgagcg gcatccccaa cgggtccaac accgcttgca tgaccttgac
     1021 ttggggcaga tcagggcggt gatctttgct gtgaccaaac tgaaacagcc cttcgtcgct
     1081 gacgctcgca taggcactgg cgctggtgct atcgacatgg acgcgttcag cctggaggtc
     1141 atagacccga accagatgtt gattgagtgc cgattcaaat gacacccaac cctggtcgtt
     1201 gcttaagcga cgcaagacaa tttcaagccg atcatcgctc aattcatgag ctcgcacgac
     1261 ttcacccgtt gcttggctca gcatcatctg ccgctgcgcc acccacggct cgacatgcac
     1321 gagccggtga tcgcctcgcg agagtatcga actcagccag atcgtcgtca cgcgcccaaa
     1381 cgacaagcct cgccagttgc catgggtcgg aaaatgggcg tcaagaacct ccgccaatcc
     1441 catccggtcc atctgcgcca acaacaacgg aatgtcatcg acgcgctctg tgatgatagt
     1501 tggtttctca ttcatctcca gagcttaacg caatctggga tttatctcca aatatgaccg
     1561 aacggtaagt accagccagc cagtcagggc agaaataagc cag
//
LOCUS       DASQSL010000268         1005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_28587, whole genome shotgun sequence.
ACCESSION   DASQSL010000268 DASQSL010000000
VERSION     DASQSL010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28587"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            19..411
                     /locus_tag="VE844_02695"
     CDS             19..411
                     /locus_tag="VE844_02695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00290.1"
                     /translation="MNPQEQFCHNLACPDRGQSGRGNICIHSRKEQRYRCSTCGRTFA
                     ATISTPFYRLRTATDVVTLVLTLLCHGCPLQAIVAAFGFDERTMREWQARAREHCQHV
                     HRGILSNRARWISATCRPLYRRPAYDVC"
     gene            complement(598..>1005)
                     /locus_tag="VE844_02700"
     CDS             complement(598..>1005)
                     /locus_tag="VE844_02700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00291.1"
                     /translation="GVEAEEKEAPPASGSRSPKKQSKSKNLLDRLGEYQEETLAFMKD
                     FAVPFDNNLAKRDLRMMKVKQKVSGCFRTTPGAQAFCRIRSYISTMKKQGHNVIAALK
                     SGFLGTPLAPAASGHPRRPVRTGSRKTRKKAVT"
BASE COUNT          184 a          272 c          304 g          245 t
ORIGIN      
        1 atctcaagga gattgccaat gaatccacaa gagcaattct gtcacaactt ggcctgtcct
       61 gatagaggac agagtggacg agggaacatc tgcattcata gccggaagga acaacgctat
      121 cgctgtagca cctgtgggcg gacctttgcg gccacgatca gcacgccttt ctataggctg
      181 cggacggcga cagacgtggt gaccctggtg ttgaccttgc tttgccacgg gtgtcctctc
      241 caggccattg tggcggcgtt tgggtttgat gagcgtacca tgcgagagtg gcaggcacgt
      301 gcaagggagc actgccaaca cgtccaccgg ggcatcttgt ccaacagggc caggtggatc
      361 tcggccacgt gcaggccgct gtataggcgt cctgcctatg atgtatgttg aactcggggt
      421 caagatggta ggcaaacgca tctggatggc gatggttttg gtggtgccag cgcgcctatg
      481 gttgggcgga gtgatcagcc cccattgcga ccgtgcgttg atcacccggt tggttcagat
      541 ggttcgcgcc tgtgcccgaa gcctagctct ccttgtctat gtggacgggt tgggagccta
      601 tgtgacggcc ttcttgcgcg tcttccggga tcctgtacgt acagggcgtc gcggatggcc
      661 ggatgcagct ggggcaagag gagttcctaa aaagccgctc ttgagagcag cgatcacatt
      721 atgaccttgc tttttcatcg ttgagatgta acttcggatg cggcagaagg cttgcgctcc
      781 gggggtagtg cggaaacatc ccgatacctt ctgcttcact ttcatcatcc gcaagtctcg
      841 cttggccaga ttattgtcaa agggcaccgc aaagtctttc ataaaggcca gcgtctcttc
      901 ctggtactct cccagccggt cgagcaggtt cttgcttttg ctctgcttct tggggctgcg
      961 gctcccactc gccgggggcg cctctttttc ctctgcttca acgcc
//
LOCUS       DASQSL010000269         1250 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_16398, whole genome shotgun sequence.
ACCESSION   DASQSL010000269 DASQSL010000000
VERSION     DASQSL010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1250
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16398"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1250)
                     /locus_tag="VE844_02705"
     CDS             complement(<1..>1250)
                     /locus_tag="VE844_02705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015866613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZC00292.1"
                     /translation="VVAASFIGTAIEWYDFFLYGTAAALVFGQLFFPVSSPLINTLSA
                     MGTFAVGFFARPVGGLIFGHYGDRIGRKTMLILTLFIVGAATFFIGLLPTYGSIGIWA
                     PILLVVLRILQGIGIGGEYGGAVLMAVEYAPEGRRGFYGSWPQVGVPAGLLLGTVAFG
                     LVSLLPDEQFFAWGWRVVFLVSIVLVGIGLYIRLQILETPAFRRVREAQQEAQVPFTE
                     LLRTQPKELLLGMGTRWIEGLVFNAYGVFIISYVTGQLELTRTTALIGVTIAAAFGVV
                     LVPVYGALSDRFGRRVVYGAGAALFGLFAFPSFLLINTRQPVLIWLSIVVALGLIYPA
                     IYAPLAAFWSELFSTRVRYTGVGAVYQFSGIFASGLTPTIATALLGFAGGEPWLFVGY
                     MIIVTVISLAAAYVSPETFRKDID"
BASE COUNT          316 a          391 c          353 g          190 t
ORIGIN      
        1 ggtctatatc tttgcggaac gtttccggag acacgtaagc cgctgccagg cttataacgg
       61 tgacgatgat catgtagcca acaaacaacc acggttcgcc tcccgcgaac ccgagtagcg
      121 cagtggcgat ggtcggcgta agcccactcg cgaatatccc tgagaattgg taaacagccc
      181 caacccctgt ataacggacg cgggtactga agagttcaga ccagaaggcc gctaagggag
      241 cgtatatcgc gggatagata aggccgagcg ccaccacaat gctcagccag atcaggaccg
      301 gctgtcgggt gttgatcagc aagaaggagg gaaaggcgaa caatccgaaa agtgctgcac
      361 ccgccccgta caccacccga cggccgaagc gatcggagag cgctccgtaa acgggaacga
      421 gcaccacccc gaaggcagca gcgatcgtga ccccgatcaa ggccgtagtt ctcgtcagct
      481 cgagctggcc ggtaacgtac gagattatga agaccccgta ggcattgaac accaggcctt
      541 cgatccagcg tgtacccatg cccaaaagca gttccttcgg ctgcgtgcgc aacaactccg
      601 taaagggtac ctgggcttct tgctgagcct ctctgacgcg cctaaaagcc ggggtttcca
      661 aaatttgcag ccggatgtac aggcctatgc cgaccaggac gatgctcacc aagaacacca
      721 cccgccagcc ccaagcgaag aactgttcgt cgggtagcag cgaaaccagg ccgaaagcca
      781 ccgtaccgag taagagtccc gccggaaccc cgacctgggg ccagctcccg tagaaaccac
      841 gcctgccctc gggcgcgtac tccaccgcca tcaaaactgc tccgccgtac tcaccgccga
      901 tgcctatgcc ctgcaagata cgcagcacca ccagcagtat cggggcccag attccgatgc
      961 taccgtacgt cggcaagagc cctatgaaaa aggtcgcggc ccccactatg aacagcgtga
     1021 ggatgagcat ggtcttgcgg ccgatcctgt cgccgtagtg gccgaagatc aaaccaccca
     1081 cgggacgagc aaagaagccg accgcgaagg tacccatggc cgacagggtg ttgatgagcg
     1141 ggctggatac cgggaagaac agttgaccga agaccagagc ggccgccgtc ccatagagga
     1201 agaagtcgta ccactctatg gcggtgccga taaagctcgc cgcgaccact
//
LOCUS       DASQSL010000270         1269 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_16406, whole genome shotgun sequence.
ACCESSION   DASQSL010000270 DASQSL010000000
VERSION     DASQSL010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1269
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16406"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..228
                     /locus_tag="VE844_02710"
     CDS             <1..228
                     /locus_tag="VE844_02710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011020875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00293.1"
                     /translation="VPWVKQPCGWQLEITRRPPEAKGFVVIPRRWVVERTFGWLGRYR
                     RLSKDFEPQVCSSEAMVYLASIHRMLRLLDG"
     gene            complement(262..1067)
                     /locus_tag="VE844_02715"
     CDS             complement(join(262..722,722..1067))
                     /locus_tag="VE844_02715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007907679.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZC00294.1"
                     /translation="MNTRNVYSTDLTDAEWRRLAHLVPAPKPGGRPAKYPRREIINAI
                     LYWFRTGCAWRLLPHDFPPWRIVFYYFWQWRTAGIWEQSHDTLRGDLRQAEGRQRQPS
                     AGSIDSQSVKTTEKRGVCGYDAGKQVKGRKRHLLVDPLGRVLAVVVHAANLQDRDGAK
                     LVLGRLKPEFFRLRLIWADRSYAGQLLQWVKGLRQWRKVQLEIVPKADTAKGFVVQPH
                     RWIVERTFGWLSRYRRLSKDYEFLTSTSEAMIQVAMINLMVRRLARKRAF"
BASE COUNT          263 a          389 c          345 g          272 t
ORIGIN      
        1 gtgccctggg tcaagcaacc ctgtggctgg caactggaga tcacccgtcg gcccccggag
       61 gccaagggct ttgtagtcat cccgcgccgg tgggtcgtgg aacggacatt cggctggctg
      121 ggccggtatc gacgcttgag caaagacttt gagcctcagg tctgctccag tgaggctatg
      181 gtctatctgg ccagtattca tcggatgctg cggttactcg acggatgaag gacaatttca
      241 aaacgctctc ttagagcgtg tctaaaaagc ccgcttccgt gccagccggc gtaccatgag
      301 gttgatcatc gctacctgga tcatcgcttc actggtagag gtaaggaact cataatcttt
      361 actcagccgc cgatagcggc tcagccatcc gaatgtccgt tccacgatcc aacggtgggg
      421 ctggactaca aagcccttcg ccgtatctgc ctttgggaca atctccagct gcactttacg
      481 ccactggcgt agccccttga cccactggag taactggccc gcatagctcc tatccgccca
      541 gatcaggcgt aaacgaaaaa actcgggctt gagccgcccg agcaccagct tcgccccgtc
      601 acggtcttgg agattggcgg catgtaccac cacagcgagc acccgcccta agggatcgac
      661 taacaggtgg cgcttgcgcc ccttaacctg cttgcctgca tcatacccac agacccccct
      721 ttttcggttg tcttgaccga ttgactatca atgcttcccg cactgggttg gcgctggcga
      781 ccctccgcct gtcgcaagtc cccccgcagg gtgtcatgac tctgctccca aatcccggcc
      841 gtgcgccact gccagaaata gtaaaagacg atccgccagg gtggaaagtc gtggggcaac
      901 aaccgccacg cacaccccgt gcggaaccaa tagaggatcg cattgatgat ctcgcgccgg
      961 ggatacttag cgggccgccc gcccggttta ggggcaggca ccaagtgtgc cagtcggcgc
     1021 cattccgcat cggtcagatc cgttgagtag acgttgcgag tattcatgtc tactcatatc
     1081 aaccacctcg ctcctgtttt tagacacgct cttaggtgat aggggtgccc ctacccgttc
     1141 tattaatcct tgacgcctaa gtagctaaac ctttcagagt accagtcccg ctccctcaaa
     1201 gaaggactga atgagaggcg ggtttcggcg caggcgattg actgcgaggt tgacgtctga
     1261 agagagatg
//
LOCUS       DASQSL010000271         1293 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_153293, whole genome shotgun sequence.
ACCESSION   DASQSL010000271 DASQSL010000000
VERSION     DASQSL010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153293"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            15..152
                     /locus_tag="VE844_02720"
     CDS             15..152
                     /locus_tag="VE844_02720"
                     /inference="COORDINATES: protein motif:HMM:NF013717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /protein_id="HZC00295.1"
                     /translation="MTRGSVFVPFHFKEAAANLLTIDALDPYGKIPEFKFCAVRVERL
                     D"
     gene            310..585
                     /locus_tag="VE844_02725"
     CDS             310..585
                     /locus_tag="VE844_02725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00296.1"
                     /translation="MAEEDTRKLLRTFGVTVTNFEERTTQLLEQAKQLRQEGNADAML
                     PLLQNFAGELLDLQGRWLEITNHIITQQRQVLTDIATLVSEWGRKSG"
     gene            697..>1293
                     /locus_tag="VE844_02730"
     CDS             697..>1293
                     /locus_tag="VE844_02730"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0061603 - molybdenum cofactor
                     guanylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HZC00297.1"
                     /translation="MTPVTGVILAGGKSRRMGRDKAFLPFGTGRLIERVIEVLRQVTG
                     DVILITNTPESYQPFGLPMFSDVFPEAGSLGGIYTGLVSAKTPYSLCLACDMPFVKSE
                     FLRFLCETATETDVVIPRNAEDFQPLCAVYSQVCREPIRQKIEAGRLKITGFFDQVRV
                     RVVEGELLTRYDPHDVMFFNANTPEEYEQARRMLGELDR"
BASE COUNT          258 a          364 c          403 g          268 t
ORIGIN      
        1 gtgcctccgg gcgtatgacc cgcggcagtg tgttcgtgcc cttccacttc aaagaggcgg
       61 cggcgaacct gctgaccatc gatgcgcttg acccctacgg caagatcccc gagttcaagt
      121 tctgtgcggt gcgggtggaa cggctggatt gagcctgatc ctggtcttct gcggcgctat
      181 attgtcatcc cctctccctt tgggagaggg atagggtgag gggcattcga ctttagcgtt
      241 ggtctcatag tcattccccc tgcagttgag aagatccgga acaagggaga agatttcgaa
      301 ggaggaagta tggccgagga ggacacacgc aaactgctgc gaacctttgg cgtcacagtg
      361 acgaacttcg aagaacgcac cacccaactc ctagagcagg ccaaacagct ccgccaggag
      421 ggaaatgctg acgccatgct gccgctgctg cagaattttg ccggggaact tttggacctg
      481 caggggcgct ggttggaaat caccaaccat atcatcaccc agcagcggca ggtgttgacc
      541 gacattgcca cgctggtgag cgaatggggg cgaaagtcgg gataggctga gggcttgccc
      601 cttcgtcggg ctgtggcatc ggcgagagag catcgggcgc agagcttggc gctgtactgt
      661 ggggcaattc actcatggca gaggggatcg agactcgtga cgcctgtgac aggggtgatt
      721 ctagcgggcg gtaaaagtcg tcgcatgggg cgggataagg cttttcttcc cttcggcacg
      781 ggcaggctca tcgagcgcgt gatcgaggtg ctgcgccagg tgaccgggga cgtcatcctc
      841 atcaccaaca ccccagagtc gtaccaaccc ttcggcctgc cgatgttctc cgacgtcttt
      901 cccgaggccg gctctctggg tgggatatac accggcctgg tatccgcgaa gactccgtat
      961 agcctctgtc tcgcctgcga catgcccttt gtgaagtctg aattcttgcg cttcctgtgc
     1021 gagactgcga ctgagaccga cgtggtgatt ccgcggaatg cggaggattt ccaaccgctc
     1081 tgcgccgtgt attcccaggt gtgccgagag cccatccgac agaagatcga ggctggccga
     1141 ctcaaaatca ccggcttttt cgaccaagtt cgcgtccgcg tcgtcgaagg cgaactcctc
     1201 acccgctatg acccgcacga cgtcatgttc ttcaacgcta acacaccgga agagtatgag
     1261 caggcacggc ggatgttggg ggagttagat cgc
//
LOCUS       DASQSL010000272         1716 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_43370, whole genome shotgun sequence.
ACCESSION   DASQSL010000272 DASQSL010000000
VERSION     DASQSL010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1716)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1716)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1716
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43370"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(327..1472)
                     /locus_tag="VE844_02735"
     CDS             complement(327..1472)
                     /locus_tag="VE844_02735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011493650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZC00298.1"
                     /translation="MTTAATHHANGNTTEATLFVAFELSEKTWRLGFTTGHGQKPRER
                     SVPARHHQRVLDEIAQAKHRLGLPETAPVVSCYEAGREGFWLHRLLLAQGITNHVVDS
                     SAIEVSRRQRRAKSDGLDVCKLLSMLMRYEQGERKVWHVIQVPSMEAEDQRHLHRDLE
                     TLKQERASTTTRIKGLLSSYGIRVTSMTKLPEQLDALRLWDGSPIPPGLRRRVLRVYA
                     HHTFVSEQIAEVEAQRRAQLQTSSDASIDKVRQLIQLKGIGINGSWLLVMEFFGWREL
                     KHRREVGGLAGLTPTPYQSGESAREQGITKSGNRHVRWMTTELAWSWLRYQPESALSV
                     WFRERFGGGGKRLRRIGIVAVARKLLIALWRFLEKGVLPEGAVLKEA"
     gene            complement(1516..>1716)
                     /locus_tag="VE844_02740"
     CDS             complement(1516..>1716)
                     /locus_tag="VE844_02740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00299.1"
                     /translation="AFQHIEAYFHSEINTLGYPKAALFGFCLALVAYNVLAVVLASLR
                     GVLDVKIDTMLVDSFSRGAAVG"
BASE COUNT          372 a          532 c          449 g          363 t
ORIGIN      
        1 ctttcagacc cgcctcaccg ctttgagagt cagtcgccgc ggtggggcct gtgcatcact
       61 ccggcatctg aaggagagga atttcacctc tacctccccc aagttatcaa gatctacaat
      121 ctcgacctct catccccggc cagtaggccg tttcgagaga acggatcgca gcgtcacccg
      181 attctctatg cgtctttcga cgagagctgg aagacccgga ggaggcgacc ccatctaact
      241 gacggcttgc ttcacaggcc tgggtatact gcgggctgcc tccaccagct ccatggctta
      301 accgtgaggc tggaacacca acatgcttac gcctccttaa gcaccgctcc ctcgggtagg
      361 acgccctttt cgaggaaacg ccatagtgca atgagtaact tgcgcgccac cgccacaatg
      421 ccgatgcgtc tcaaacgctt gccaccgcca ccaaagcgct cacgaaacca cacactcagg
      481 gcactctcag gctgatagcg cagccaactc caggccaact ccgtcgtcat ccagcgcaca
      541 tgccggttgc ccgacttcgt aatgccttgt tctcgggcgc tctcaccgct ttgatacggc
      601 gtcggggtta agcccgctaa gccccccact tcacgacgat gcttgagctc gcgccagccg
      661 aaaaattcca tcaccaacaa ccacgagcca ttgatcccga tgcctttgag ctgaatcaac
      721 tggcgcacct tgtcgatgct ggcatcgctt gaggtctgaa gctgggcacg acgttgcgct
      781 tccacttcgg caatctgttc actcacaaag gtgtgatgcg catacacccg caggacccga
      841 cgacgcagcc ccggtggaat cggcgagcca tcccaaagcc gcagggcatc gagctgttcg
      901 ggcaatttcg tcatgctcgt tacccgtatc ccgtagctgc tgagcaaccc tttgatgcgg
      961 gtcgtggtac tggcccgctc ctgcttgagg gtttctaaat cgcggtgcag atggcgttga
     1021 tcctcggcct ccatcgaagg cacctgaatc acgtgccata ccttgcgttc accttgttca
     1081 tagcgcatca acatgctgag caacttgcat acgtccaagc catcgctttt ggctcgacgc
     1141 tggcggcggc tgacttcaat cgccgaggaa tccaccacat ggttggtgat cccttgggcc
     1201 agtaaaaggc gatgcagcca gaagccctct cgacccgctt catagcaact gaccacgggg
     1261 gccgtttccg gaagacccaa gcggtgtttg gcctgggcga tttcgtcgag cacgcgttgg
     1321 tggtgccgtg cgggcacaga gcgctcacgt ggcttttgac catggccggt ggtgaagccg
     1381 agccgccagg ttttttcact gagttcaaag gccacaaaca gggtcgcctc ggttgtgtta
     1441 ccatttgcat gatgggtcgc tgcggttgtc ataagctttt cctccctagt gataaattaa
     1501 gtattatgaa aaagcttacc caacagcggc ccctctagag aatgagtcga caagcatagt
     1561 atctatcttg acgtcaagga caccccgcaa ggacgccagc acaacggcga gcacgttgta
     1621 ggcaaccaag gcgaggcaaa atccaaacaa ggcggctttc gggtagccca aggtattgat
     1681 ctcagaatga aagtacgcct cgatatgttg gaacgc
//
LOCUS       DASQSL010000273         1200 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_16419, whole genome shotgun sequence.
ACCESSION   DASQSL010000273 DASQSL010000000
VERSION     DASQSL010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1200
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16419"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..872)
                     /locus_tag="VE844_02745"
     CDS             complement(<1..872)
                     /locus_tag="VE844_02745"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HZC00300.1"
                     /translation="MVGRLPIWLVLLVLVSGAYAEERDVILVLDNAGAMKRVDAKGVV
                     GSAVDGFVEKLKGDVRAAVVLLDRSATVFVPLIAVTDKSRLGFLETLQKLNYHGKYPD
                     TVAALEQALREFEIHGREGAEKSIILLTGGTPDPSDTALVQSRLHALGYEVGSIDGVM
                     GPKTRRAIRQFQRQVGMPVDGRLNRTLLARLEEVYGARWQGGLTAKATRAGVKVIVVA
                     LGEGSALGQALAEKTSGEYLQIPKAEDLAGVFERLSSAFSQGAEIPALAPEAPAIQAP
                     EGVEILPEQPARVT"
BASE COUNT          245 a          384 c          312 g          259 t
ORIGIN      
        1 aaggtcactc tcgccggttg ctcggggagg atctctaccc cctcaggcgc ctgaatggca
       61 ggggcctctg gggctagcgc agggatctcc gccccttggc taaaggcgct gcttaggcgt
      121 tcgaatacgc ccgctagatc ctcagctttc gggatctgaa gatattctcc ggaggtcttt
      181 tccgccaatg cctgaccaag ggcggaaccc tcgcccaatg ccaccacgat gaccttgact
      241 cctgcgcgag tagccttggc agtcaacccc ccctgccatc ttgcgccata gacctcttct
      301 aagcgggcaa gaagcgtcct atttagcctt ccatccaccg gcatccccac ctgcctctga
      361 aactggcgta tggctctcct tgtttttggc cccataactc catcgattga acccacctcg
      421 taacccaggg catgcaggcg cgattgcact agcgccgtat cacttgggtc cggagtgcca
      481 ccggtcaaga ggataatcga cttttccgcc ccctcccgac cgtggatctc aaactcacgg
      541 agagcctgtt ccagggctgc cacggtatcc gggtacttgc cgtggtaatt gagtttttga
      601 agggtctcga gaaaccctaa tcgggactta tctgtgaccg cgatgagtgg gacaaagaca
      661 gtagcagacc gatcaaggag gaccaccgcg gcccgcacat cgcctttaag cttctcaacg
      721 aacccatcga ccgccgagcc caccactccc ttggcatcca ccctcttcat ggctccagcg
      781 ttatccagga cgaggatcac atctctttcc tcggcatagg cgccagacac gagcaccagt
      841 aatacaagcc aaattggcag tcttccaacc attatgctgg ttcctatcga ttacgacgca
      901 gctgtagggg ccgctcttta gggggcaact tggcttgcta tgaatcgtgt cccctattat
      961 tccgctacaa gcgggagcga ggcacgagcg gacgctggag gcagtcggct gcaagccctt
     1021 gttcggtcat gctttagctt ctgcttcagc tcagcagcca atgccgttac tgtctacacc
     1081 atggcgatag ggttgcccgg cgaccccgtg gctcccttga gccggagcgg actgaagata
     1141 taggcgaact cgtatacccg gtcagccgca agcgcctcca agtccaggtt ctcgaagaga
//
LOCUS       DASQSL010000274         1289 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_2382, whole genome shotgun sequence.
ACCESSION   DASQSL010000274 DASQSL010000000
VERSION     DASQSL010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1289
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2382"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..255)
                     /locus_tag="VE844_02750"
     CDS             complement(<1..255)
                     /locus_tag="VE844_02750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020878339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HZC00301.1"
                     /translation="MSAPVDLYDTDDVFVLKAELPGLGKDDIQIEVHDRTLTLRGERK
                     QETEAKEERYHRRERTYGSFQRSFWLPTIVDAEKIQADFKN"
     gene            complement(252..398)
                     /locus_tag="VE844_02755"
     CDS             complement(252..398)
                     /locus_tag="VE844_02755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00302.1"
                     /translation="MALARWTPGWGPTRWSPERELQRLRTEMDRLFEEVFGDGGEGRW
                     QTGM"
     gene            complement(762..1166)
                     /locus_tag="VE844_02760"
     CDS             complement(762..1166)
                     /locus_tag="VE844_02760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012628859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00303.1"
                     /translation="MSRDKPQAEALNKHPEPYQHDLNPDAMAGQNLGIGEVQPSKHGP
                     TAYDVKPVHNRFKQFSDAELKQLRLLPVGSRLEQGATYIDLNNLDLGEFTATGDMRVG
                     DNNWLVAKKDVPYELWNRLLGIETSERLRTTE"
BASE COUNT          231 a          387 c          365 g          306 t
ORIGIN      
        1 gtttttgaag tcggcctgga tcttctccgc gtccactatg gtgggcagcc agaatgagcg
       61 ttggaagctg ccgtaggtac gctctcgccg gtgataacgt tcttccttgg cttcagtctc
      121 ctgcttgcgc tccccgcgta gggtaagcgt gcggtcgtgg acctcaatct ggatgtcgtc
      181 tttgccgagg ccagggagct ccgccttgag gacgaagacg tcatcggtgt catacaggtc
      241 gactggggcg ctcacatgcc agtctgccaa cggccttcgc cgccatcgcc aaagacctct
      301 tcgaataggc ggtccatctc cgtgcgcaag cgctggagtt cgcgctccgg ggaccagcgc
      361 gtcggccccc agccgggtgt ccatcgtgcc agtgccatcg ttttctcctc ctatgttcag
      421 gtgggccttg caagtcaagg cccggccaga tgcgtcttgg tatacgagac tagcgtgcac
      481 acaacgcggc aagtgtttcc tactgtccta gtgcgagaaa attgcaacac acgtgccgca
      541 tgcaatatca ccatagggct gccataagcc cacgctcctt ggcacgtgcg atgtccgatg
      601 gccacgcgtc cggtggcacc cacggtgcaa gctttcctta tctctctgag agtctaaaat
      661 cattgatttc tcagtctgaa agccagatac ctgggggtgc atcggtgatg ggcatgccag
      721 tggagcaact ccccctattc tttacacccc atcgctttgg cctactcagt cgtccgcaag
      781 cgctcagaag tctcgatacc gagcagtcgg ttccagagct cgtagggcac atctttcttg
      841 gccaccaacc agttgttgtc gccgacgcgc atatcacccg tggcggtgaa ctccccaagg
      901 tccaggttat ttaaatcgat gtacgtggct ccttgctcaa gtcggctgcc gaccggcagc
      961 aggcgcagct gcttgagctc ggcatcggag aactgcttga agcgattgtg cacgggtttg
     1021 acgtcgtacg cggtcggccc atgttttgag ggctgcacct ccccgatgcc gagattttga
     1081 cctgccatgg cgtcagggtt caggtcatgc tgatacggtt caggatgttt attcaaggcc
     1141 tcagcttgcg gtttatcgcg cgacatgtct ctgtcctttc agcactcacg aatgcggacg
     1201 ttgctgcatt gcacccgcga acctggatga tgcgcttgca gcccgatgtg ccgctagggg
     1261 ccgcctatct tccgcgatga gactgctca
//
LOCUS       DASQSL010000275         1003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_125901, whole genome shotgun sequence.
ACCESSION   DASQSL010000275 DASQSL010000000
VERSION     DASQSL010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125901"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="VE844_02765"
     CDS             <1..192
                     /locus_tag="VE844_02765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00304.1"
                     /translation="MKIDKVLAVYKTSPLLLVVESEEGKLFELSFTDLKASGYVFSDA
                     AWKSLVEDYRIFTCQPASR"
     gene            complement(205..>1003)
                     /gene="secF"
                     /locus_tag="VE844_02770"
     CDS             complement(205..>1003)
                     /gene="secF"
                     /locus_tag="VE844_02770"
                     /inference="COORDINATES: protein motif:HMM:TIGR00966.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HZC00305.1"
                     /translation="QFHFQRELTVDQVRATLRTVGLEDSEIQRSEKDGDFLVRIPSSD
                     EPLEEIRTRVVGAFRQELGEQGVELRRAEQVGPKVGRDLSRKALFAVIWSALGILVYI
                     WWRFGFRLEFALAVVIADIHDVLLTLGLFAITDKEVTLTVLAAVLTVAGYSVNDSIVV
                     LDRIRENLRARPRDPLARVVNASLNETLSRTFLTGGSLLCTLLALILFGGEVLRDFAL
                     ALVVGVLAGTYSSLFVVAPIVLYWPWTASRRQRQRPQVPKTPPARTR"
BASE COUNT          243 a          310 c          270 g          180 t
ORIGIN      
        1 atgaaaatcg acaaggtgct cgcggtgtac aagacatcac cgctgctgct agtggttgaa
       61 tctgaagaag ggaaactgtt cgaactgtcc tttacggacc tgaaggcatc cggatatgtc
      121 ttcagtgacg ccgcgtggaa gagtttagtc gaggattacc gcattttcac atgtcagccc
      181 gcctcacgtt gaaccacaag gagtctaacg cgtgcgcgct ggcggagtct tgggaacttg
      241 gggtcgctgc ctttggcggc gactcgcggt ccagggccag tagaggacga taggggctac
      301 cacgaagagc gaggaatagg tcccagcgag cacgccgacc accagagcca acgcgaaatc
      361 gcgcagcact tctcccccaa acagaatcaa cgccaacagg gtacacaata agctcccacc
      421 ggtgagaaaa gttcggctca gcgtctcatt caggctcgca ttcacgacgc gggcgagcgg
      481 gtcccgtgga cgggcacgaa ggttctcacg gatccgatcc aagacgacga tcgagtcgtt
      541 caccgaatat ccggcgacgg tcaatactgc ggccagaacc gtcagggtca cctctttatc
      601 ggtgatggca aagagcccaa gcgtcagcaa gacatcgtga atgtctgcga taaccacggc
      661 cagcgcaaac tccagccgaa acccaaaccg ccaccagatg tataccaaaa tccccagcgc
      721 cgaccaaatg accgcgaaca gcgccttgcg gctcaaatct cgcccgacct tcggccctac
      781 ctgttcggca cgtcgcagtt ccacaccttg ctcacctaac tcctgccgaa aggccccaac
      841 gacgcgcgtg cggatctctt caagaggctc atcgctgctg ggaatgcgca cgagaaaatc
      901 gccatctttt tccgagcgtt gaatctcact gtcctcgagg ccaaccgtgc gtagcgtggc
      961 acgcacctga tcgaccgtca gctccctctg gaagtgaaac tgc
//
LOCUS       DASQSL010000276         6801 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_2383, whole genome shotgun sequence.
ACCESSION   DASQSL010000276 DASQSL010000000
VERSION     DASQSL010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 6801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6801
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2383"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1765)
                     /locus_tag="VE844_02775"
     CDS             complement(<1..1765)
                     /locus_tag="VE844_02775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018310799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter Kup"
                     /protein_id="HZC00306.1"
                     /translation="MVNGTHRQQSRAALTLAALGIVYGDIGTSPLYAVKETFNPEHGI
                     PLEAENILGGISAIFWSLMVVVSIKYVTLITRAHNKGEGGIMALLALALSSVKDHARW
                     YTLIVPVGLFGAALFYGDAVLTPAISVLSAVEGLEVGTTALKPYVLPVSVGVLIALFL
                     FQRHGTAAVGALFGPVMVLWFLALAAAGVYGIVRYPGILGALNPLHALGFVTQHGFAS
                     FVVLGAVLLAFTGAEALYADMGHFGKGPIRITWFGLVFPALALNYFGQGALLAADPKA
                     IENPFYLLYPSWALYPMVALATAATVIASQSTISGAYSLTKQAIQLGVLPRMNVVHTS
                     AKQIGQIYMPGVNGVLLIVVVAAVLGFGSSAKLASAYGVAVTGTMLVDTVLTFFVIRY
                     GWGYNLLLCVFATGFFIVVDLAFFSSSLLKVAEGGWFPLALGAGVFTVMLTWRRGRET
                     LFKRLQSSDAPLEQFLNALFREPPPRVPGTAVFLTATPEAVPHALLHNLNHNKVLHER
                     VVFLTVEVRDVPWVPFAERVSIESLGHDCWRLLLYFGFKNQPDVSQALTELCRERGLE
                     FDMMQTSFFLSRETVIPVAGIG"
     gene            2239..2859
                     /gene="gmk"
                     /locus_tag="VE844_02780"
     CDS             2239..2859
                     /gene="gmk"
                     /locus_tag="VE844_02780"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011911696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HZC00307.1"
                     /translation="MPRQEGTLFIVSAPSGAGKTSLVSALAASEPDLRVSISHTTRPR
                     RPGECDGINYYFVDHASFEAMIRRGEFLEYACVFDHLYGTSGPWVNAQLEGGKDVILE
                     IDWQGARQVRAAMPQAISLFILPPSYQALEQRLKGRGKDTEETIERRMRDAVNEIIHY
                     QEYDYLVVNDAFDCALADLQAIVRASRLRSKVQHRALTPLLRDLMV"
     gene            2915..3178
                     /gene="rpoZ"
                     /locus_tag="VE844_02785"
     CDS             2915..3178
                     /gene="rpoZ"
                     /locus_tag="VE844_02785"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009577094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HZC00308.1"
                     /translation="MARLTVEDCLPNVNNRFDLVLLASKRARQIALGSRPLVAEEHDK
                     PAVVALREIAKGLITPTVVAALEAQERKDPLESVLEFKDTAPV"
     gene            3282..5369
                     /locus_tag="VE844_02790"
     CDS             3282..5369
                     /locus_tag="VE844_02790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016712710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0015968 - stringent response [Evidence
                     IEA];
                     GO_process: GO:0015969 - guanosine tetraphosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RelA/SpoT family protein"
                     /protein_id="HZC00309.1"
                     /translation="MQTYLDPAQVEQIERAYAFSAKAHAGQRRLSGEPYIEHPLAVAT
                     ILAEMRMDPQTLIAALLHDVLEDTPVTKEQVSAGFSDEVAGLVDGLSKLTQIKFENYA
                     EAQAENFRKMLMAMCNDIRVILVKLADRLHNMRTLEALKPEKRRLIARETLEIYAPIA
                     HRLGINSIRRELEDIGFAALFPKRYQILSKELKKVRGHRKNILIRIREAIQYRLTQEN
                     LQAQVSGREKHLYGIYKKMKAKHLTLSQVLDVYGYRIVVDSVDTTYRVLGVVHNLFKP
                     MPGKFKDYIAIPRSNGYQSLHTVLMAYGIPIEVQIRTQAMDQIARAGIAAHWVYKSGD
                     SVKNGAHMRVHEWLHEVLEIQRQAGDSREFLENVKIDLFPDEIYVFTPKGDIIKLPRG
                     ATAVDLAYAIHTDLGHCCVAARINHCLAPLRTSLATGQTIEIITAPGATPNPTWLNFV
                     VTGKARAHIRHFLKNLRRDEACALGRRLLNRELAAFSLILETVSPERLAAALKEYKLN
                     DIDSLLEDIGLGKHLAPIVVRHLISVSEGEASSTKAQASSTAPLAIVGTEGMVVTFPK
                     CCHPIPGDPILGYVSSGRGIVVHRQSCKNLSEFRNQPEKWVDVQWGPDIKAEFPAEIR
                     MDVRDQRGALATIAAAIAEQEANIATLEMTDRDGRYVTLTLIIAVRDRRHFARVIRAI
                     RLLHSVSRISRTR"
     gene            5504..6085
                     /gene="rpoE"
                     /locus_tag="VE844_02795"
     CDS             5504..6085
                     /gene="rpoE"
                     /locus_tag="VE844_02795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002707228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoE"
                     /protein_id="HZC00310.1"
                     /translation="MGDNGADKQLVERVQRGDKQAFDLLVLKYQHRIIKLVSRYIRDP
                     SDALDVAQDAFLKAYRALPNFRGESAFYTWLYRIAINTAKNYLVMQSRHLLETEVNPE
                     SEEGEQFELESTLKEYSTPENMVLTDEIQATIVAAIDDLPDDLRTAILLREVEGLSYE
                     EIANVMGCPVGTVRSRIFRARESVDNRLKPLLE"
     gene            6099..6647
                     /locus_tag="VE844_02800"
     CDS             6099..6647
                     /locus_tag="VE844_02800"
                     /inference="COORDINATES: protein motif:HMM:NF015810.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-E factor negative regulatory protein"
                     /protein_id="HZC00311.1"
                     /translation="MMKDTSLEELSALIDGNLPKEAVDRLIDLLIKDASMRAAWMRYH
                     LMSDALGNHLPQSICLNLAEGVSLALAREPIFAAPKQRSFSRMIPIAGLAIAASVAGI
                     TLLGVQRIYKEDQTPPEPLPVAEQPVLHSLPVSTMRWNGQPSSPPSRLNSYLLNHNRY
                     NPSLSMQGVSPYVRIVSYETSP"
BASE COUNT         1568 a         1853 c         1915 g         1465 t
ORIGIN      
        1 cgcctatacc agccaccgga attaccgttt cgcggctcag gaagaacgag gtctgcatca
       61 tatcgaactc caggccccgc tctctgcaca gctcggtgag cgcttgcgat acgtcaggct
      121 ggttcttaaa cccgaagtac agtaacaagc gccagcagtc gtgccccagc gattcgatcg
      181 acacgcgctc agcaaatggc acccacggca cgtctctcac ctccacggtg aggaacacca
      241 cgcgctcgtg cagcaccttg ttatggttga ggttgtgcag cagcgcatgc ggtaccgctt
      301 cgggcgtcgc agtgaggaac actgccgtgc cgggcacacg cggcggaggc tcacggaaaa
      361 gcgcgttcag gaactgttcg agcggtgcgt cggaactctg gagccgctta aacagagtct
      421 cccggccacg ccgccacgtc agcatcacgg tgaatactcc ggcgccgagg gcgagtggga
      481 accagccgcc ctcggcgacc ttcaacagac tcgaggaaaa gaacgccagg tccacgacaa
      541 tgaagaaacc cgttgcgaac acgcatagca gcaggttata gccccagccg tagcggatca
      601 cgaagaacgt aaggactgtg tccaccagca tcgtcccggt gaccgccaca ccgtatgccg
      661 aggcgagctt agcggaggag ccgaagccga gcacggcggc aacgacaacg atgagcagca
      721 ccccattgac gcccggcatg tagatctggc cgatctgctt cgcggatgta tgcaccacat
      781 tcatgcgtgg caggacgccg agctggatgg cctgcttggt cagcgagtag gcgcccgaga
      841 tcgtggactg cgaggcgatg accgtcgccg cagtcgcgag tgcgaccatc ggataaagcg
      901 cccaggacgg atagagcagg tagaagggat tctcgatcgc ctttggatcc gcagcgagca
      961 gcgcaccctg cccgaagtag ttgagcgcga gtgcagggaa caccaacccg aaccacgtga
     1021 tacggattgg ccctttgccg aagtgtccca tatcagcata gagcgcttcg gcgcctgtga
     1081 acgcgagcag cactgcaccc agcacgacga atgaggcgaa gccgtgctgg gtaacgaacc
     1141 cgagcgcgtg cagtgggttg agcgcgccca ggatgccggg ataccgaact atcccgtaaa
     1201 cgcctgctgc agctagggcg aggaaccata gcaccatgac cggcccgaac aatgcgccaa
     1261 ccgccgcggt tccatggcgc tggaacagga acagcgcgat caacacacca acggatactg
     1321 ggagaacgta aggcttgagg gcggtagtac ccacttcaag tccctcgacc gcggaaagca
     1381 ctgagatcgc gggcgtcagc acggcgtcac catagaacag cgccgcgccg aataggccca
     1441 cgggcacgat aagcgtgtac cagcgtgcgt gatctttcac ggacgataaa gcaagcgcga
     1501 gcaatgccat gatgccgccc tcacccttat tatgcgcccg cgtgatgagt gtcacatatt
     1561 tgatcgagac gaccaccatc agcgaccaga agatcgctga gatgccgccg agtatgtttt
     1621 cagcttcgag agggatcccg tgctcgggat tgaaggtttc tttgaccgcg tacaggggac
     1681 tagtgccgat gtcgccatag acgatgccga gggcagcaag agtcagcgct gcgcgggatt
     1741 gctgccgatg tgtgccgttg accatcttcc agcccccacg aacgagatga cttgaaggtt
     1801 gctcttgcgt tgcacaaagt gggtgctcat ccgctaatac tttgattatg cgtaagtcct
     1861 tgattcataa tctgttacac gacaaagacc catcagtcca agttgttgat attgaatgcc
     1921 tgatcctaaa tcaaaatatt agcgggtgag gaccgttttt ggggtccact ataacgtatc
     1981 cgatctcgtt tgcacattct tgcacgccgt tagaagctgt tttaaaaccc atcatgccag
     2041 tcgattcagt aacagcaacg ggagggagtc tttagtatga ctctatttcg caaattccgg
     2101 agggctgtca taatatttgt aaagtttgct gacaacgcgc tttttgtgtg cacccctatg
     2161 tgcacccctt aaaaacctac aatggaagaa accattatgt ggtgcggctt gcgtgccgca
     2221 ctctaggtac aggctcagat gccacggcag gaggggaccc tttttatcgt ctccgctccc
     2281 tcgggggccg gcaagaccag tctggtaagc gccttggcgg catctgagcc ggatctgcgc
     2341 gtctctatct cgcataccac ccgtcccagg cgccctggag agtgtgacgg cataaattat
     2401 tatttcgtcg atcacgcttc ttttgaggct atgatcaggc gaggtgaatt tctggagtac
     2461 gcgtgtgtct tcgatcacct gtatggcacc tccggtcctt gggtcaatgc gcagcttgaa
     2521 ggcggcaagg atgtgatcct ggagatagat tggcaagggg ctcgccaggt gcgcgctgct
     2581 atgcctcaag ccattagtct ctttattctg ccaccttcct atcaggcgtt ggagcaacgg
     2641 cttaaaggac gtggcaaaga tacggaggaa acgattgagc ggcgtatgcg cgatgcagtc
     2701 aacgagatca ttcactatca agaatacgac tacctggtgg tgaatgacgc atttgattgc
     2761 gccctggcgg atctgcaggc gattgtgcgg gccagccgct tgaggagtaa ggttcagcac
     2821 cgcgcactga cgccactgtt gcgggatctg atggtctaat taggcaaaat ttgatagatt
     2881 tattaccaat tattggagca tttgaggaac gtctatggct cgattaaccg ttgaagattg
     2941 ccttcctaat gtgaataatc gctttgactt ggtccttttg gcgagcaaac gggcgcgtca
     3001 gatcgcctta ggatcgaggc ctctggttgc cgaggaacat gataaacccg ctgtagttgc
     3061 cctgcgggag atcgccaaag gtctgatcac cccgaccgtg gttgcagccc ttgaggccca
     3121 ggaacggaaa gacccattgg agtctgtttt agagtttaaa gatactgcgc cggtatgatc
     3181 ttcttcacct tccttccttg gtagacttag cctctcagat tgaagcgctg ccctgtcctg
     3241 cgaatggatc agtagcgccg ttcaatgcgc tacgcgccct catccagacc tatctggatc
     3301 ccgctcaagt cgagcagatc gagcgcgctt acgcgtttag tgccaaagcg catgcaggcc
     3361 agcgccgcct gagcggtgaa ccctatatcg aacatccgct cgccgtcgcc acgatcctgg
     3421 ccgagatgcg catggatcct cagaccttga tcgccgccct gctgcacgat gtcctggagg
     3481 acacacccgt gactaaagaa caagtgagtg cgggatttag cgatgaggtg gcgggactgg
     3541 ttgacggcct gagcaagctc actcagatca agttcgaaaa ctacgcggag gctcaagctg
     3601 aaaatttccg caagatgctc atggccatgt gcaacgatat ccgggtcatc ttggtcaagc
     3661 tcgccgatcg cctgcataac atgcgcacgc tggaggccct caagcccgaa aaacggcgcc
     3721 tgatcgcgcg ggagacgctc gagatctacg cccctatcgc ccaccggtta gggatcaaca
     3781 gtatccgccg cgagcttgag gacattggct tcgccgcttt atttccaaaa cgctaccaga
     3841 tcctctctaa agagctaaaa aaggttcgcg gccatcgcaa gaatatcttg attcggatca
     3901 gagaggcgat ccaataccgg ctgacacagg aaaatctaca ggcccaggta tccgggcggg
     3961 aaaagcatct ttatggcatc tacaaaaaga tgaaggccaa acatttgact ttatcgcagg
     4021 tattggacgt ctatggatat cgcatcgtcg tggacagtgt ggataccacc taccgggtgc
     4081 tcggtgtggt tcataaccta ttcaaaccca tgcccggcaa gtttaaggat tatattgcca
     4141 ttcccaggag caatggctat caatccctcc ataccgtgtt gatggcttat gggatcccca
     4201 tcgaggtcca gatccgaacg caggccatgg atcagatagc cagagcgggg atcgcggccc
     4261 attgggtata taaatccggc gacagcgtca aaaatggcgc ccatatgcgg gtccatgaat
     4321 ggctgcatga ggtattggag atccaacggc aggcaggcga ctctcgggaa ttcctggaga
     4381 acgttaagat cgatctgttt ccggatgaaa tctatgtatt tacgcccaag ggcgatatta
     4441 taaagctgcc tcggggtgcc acagccgtcg atctcgccta tgcgatccac accgatctcg
     4501 gccattgctg tgttgcggcc cgcattaacc attgtttggc cccgctcaga acctcgctgg
     4561 ctaccggtca aacgattgag atcatcacgg cgcccggggc cacccccaat ccgacgtggc
     4621 tgaattttgt ggtgaccggg aaggcgcgcg cccatatccg ccacttccta aagaatcttc
     4681 ggcgtgatga ggcttgcgct ctgggtcgac gcctgttgaa ccgtgagctc gccgcctttt
     4741 ctctgatcct tgagacggtc tcgccggaac ggttggcggc tgcccttaag gaatataagc
     4801 tcaacgatat tgatagcttg ctggaagata tcggcctggg taaacacctt gcccccatcg
     4861 tggtgcggca tctgatctcg gtcagcgaag gggaagcaag ctcgaccaaa gcccaagctt
     4921 cttcgactgc cccccttgca atcgtgggta cggaggggat ggtagtcaca ttccctaaat
     4981 gctgtcatcc tatccccggt gatcccatcc tgggctatgt ctcttcggga cgcggtatcg
     5041 ttgtccatcg ccagtcgtgc aagaatctct ctgaattccg caaccagccg gagaaatggg
     5101 tcgatgtaca atgggggccg gatatcaagg cggagttccc cgctgaaatt cgcatggatg
     5161 tccgtgatca gcggggagcg ctggcgacca tcgccgcggc aattgccgag caggaggcga
     5221 atatcgccac cctggagatg accgatcgcg atggtcgtta tgtgacgctc accttgatca
     5281 tcgctgtgcg cgatcgccgg cactttgcgc gggtgatccg agccatacgc ctgctccatt
     5341 ctgtgtcacg tataagcagg acaagataat taaaagcatg gatccgcata taatggggat
     5401 aataaaaaac ggtgccgttt cacgaactaa atttccccgc gattgtctag cctggtagcg
     5461 gatcgggcgc cgttgataat catactcttg aggaggaggc ccagtgggcg acaacggcgc
     5521 ggacaagcaa ctcgtagagc gagtacagcg cggtgacaaa caggcgtttg atctgttggt
     5581 attgaaatac caacatcgga tcataaaatt ggtctcgcgc tatatccgcg atccgagcga
     5641 tgcgctggat gtggcccagg acgcgtttct gaaggcctat cgggcattgc cgaattttcg
     5701 gggtgaaagc gcgttttata cctggcttta tcggatcgcc atcaatactg ccaagaatta
     5761 tttagtcatg cagtcacggc atctccttga gacggaagtc aacccggaaa gcgaggaagg
     5821 tgaacaattc gagctcgagt ctactctaaa ggaatactca accccggaga atatggtgct
     5881 caccgatgag atccaagcta ccatagtggc cgctattgat gacttgcctg atgatctgcg
     5941 aacagcgatc cttttgcgcg aggtagaagg attgagctac gaagagattg ctaatgtcat
     6001 gggatgtccg gtaggcaccg tgcgatcacg tatctttcgt gcgcgagaat ctgttgataa
     6061 tcggcttaaa ccattgttgg agtaacacga ggatgaggat gatgaaggat acgagtctag
     6121 aagagttatc ggccttgatt gatgggaatt tgccaaagga ggcggtcgat cgccttatcg
     6181 atcttttaat caaagacgcg agtatgcggg ccgcatggat gcgttatcac ctgatgagtg
     6241 atgccttggg aaaccacctg ccgcaaagta tatgccttaa tctggcagag ggagtttcgc
     6301 tggcgttagc gcgggaacct atcttcgcag ccccaaagca gcgttctttt agccgcatga
     6361 tccctatcgc aggactcgcc atcgcggcct cggtggcagg gatcaccctc ttaggtgtgc
     6421 agaggatcta caaggaggac cagaccccgc cggaaccgct accggtggcc gagcagccgg
     6481 ttctccactc cttaccggta tcgaccatgc gctggaatgg ccagccttcc tctcctccct
     6541 cgcgtttgaa cagctatctg cttaatcata acagatataa tccaagcttg agcatgcagg
     6601 gcgtttctcc ctacgttaga attgtgagct atgagaccag cccataggcg attggggcat
     6661 ccattagtag cggttttaag ctggaccgtg gccttcgggc tcagtttatc cgcgccgctc
     6721 tgggcagggg atacatccgc tcaggcccgt gctatcatca atcggatgtc gttagcggcc
     6781 cgcaccctga actataaggg g
//
LOCUS       DASQSL010000277         1009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_165984, whole genome shotgun sequence.
ACCESSION   DASQSL010000277 DASQSL010000000
VERSION     DASQSL010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165984"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(310..>1009)
                     /locus_tag="VE844_02805"
     CDS             complement(310..>1009)
                     /locus_tag="VE844_02805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020550765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4386 domain-containing protein"
                     /protein_id="HZC00312.1"
                     /translation="RKIALVTGVLFLITFITAIPPVFFFYVPVLDDPRYIVGAGADMS
                     VLLGAFLELILIIANIGTAVVLFPILRRQNEILALGYVTARVVECVFIAVGLLSLLTV
                     VTLRQEASGADAGSLVAVGESLVALHDWTRLLGPGFIVGVGNGLMLGYLMYTSRLVPR
                     GMALLGLFGGPLLCASGIAILFGVFEAGSVWQAIATIPEFFWELSLGIWLTVKGFNPS
                     VIASEKFRLRPAQT"
BASE COUNT          237 a          290 c          292 g          190 t
ORIGIN      
        1 ctaagttccg gcccttcctc ttcatgcccc tattcaccga agtgcatgga gagactgtat
       61 gaaaagtagc tcagtggagt ctggagcgtg gattttggtg gtgcaacgcg ctaagaacgg
      121 gtcctttttg cctcgttttg ccagcccgta aggtcttcgg tttgggatat tgagagtttt
      181 cagacagtct ctccaggcac ttggctgagt aagcattgaa gaggactagc agccctcaag
      241 gtctcgtccg ctccgtacca gctcctccgc aggggtttga aatgggccca ctccctctat
      301 ctctctaggc tacgtttgtg caggccttag cctgaatttc tcggaagcga ttacagatgg
      361 attgaatcct ttgactgtga gccagatgcc aagcgacaac tcccaaaaga actccgggat
      421 ggtcgcgatg gcctgccaca cagagcctgc ttcgaagacc ccgaacagga tggcgattcc
      481 cgaagcacac agcagaggac cgccgaagag ccccagcaag gccatgcccc gtggcacgag
      541 tctcgacgtg tacatcaagt agcccagcat cagcccgttc ccgacgccga cgatgaagcc
      601 gggtccgagc aggcgcgtcc aatcatggag cgcgaccagc gactcgccga ccgcgacgag
      661 cgaaccggca tccgcgcccg aagcctcctg ccgcaacgtc acgaccgtaa ggaggctgag
      721 gaggccgacg gcgatgaaga cgcattcaac gacacgagcc gtgacgtatc caagggctaa
      781 gatttcgttc tgccgcctaa ggatcgggaa cagcacgacg gcggtgccga tgttcgcgat
      841 gatgaggatg agctccaaga acgctcccag gagcacgctc atgtcggcgc cggcaccgac
      901 gatgtagcga gggtcgtcca acacagggac gtagaaaaag aaaactgggg ggatcgcggt
      961 gataaacgtg atcaggaaca gtacgcccgt aactagtgca atctttcta
//
LOCUS       DASQSL010000278         1527 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_83704, whole genome shotgun sequence.
ACCESSION   DASQSL010000278 DASQSL010000000
VERSION     DASQSL010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83704"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..406
                     /locus_tag="VE844_02810"
     CDS             <1..406
                     /locus_tag="VE844_02810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00313.1"
                     /translation="VCPAAVQKDRRSKGGGCLVKRILYSAIAALVAMLILMPAALAQD
                     MVPGDDHPHAPEPGAVVVGSHEELEQIAGQPVPSPHPGQHPEPVPAAPTEGLPASGGP
                     PVILPAAALLLLVGSAVLAYGVLRKAAGEERG"
     gene            complement(866..>1527)
                     /locus_tag="VE844_02815"
     CDS             complement(866..>1527)
                     /locus_tag="VE844_02815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00314.1"
                     /translation="YRHNLWRAPRHLRGHNRFFRYLVLNKYTAAENIAASEAGAAVEI
                     HRLAEQFPEPKRDQIRELAWSYIQVVVDEEWPLMRDGQVSPRAEALAYELGRTMDNFE
                     PNTESEKEVYAQGLDRFTDLHKDRQVRLLNVRQGLPTILWVVLVMLATITILFSYFLG
                     MENRRIHMLAVAALAAGIAFIISTIVGLDDPFGGDLRVGPDAFESALNTMIEENREQK
                     P"
BASE COUNT          309 a          433 c          450 g          335 t
ORIGIN      
        1 tgtatgtcca gccgcggttc aaaaagaccg ccggagtaag ggaggtggtt gcttagtgaa
       61 acgcatcctc tactcggcta tagcagctct tgtagccatg ctgatcttga tgccagcagc
      121 cctggctcag gatatggttc caggggatga tcacccacac gcgccggaac caggcgcggt
      181 ggtagtcggc tctcacgaag agctagagca gatagcaggc cagcccgtac cctcgccaca
      241 tcccggacaa catcctgagc cagtgcccgc agcgcccacc gaagggctgc ctgcctcggg
      301 tggaccgcct gtaatcctgc cagctgctgc cctgctactt cttgtgggct cagctgtcct
      361 ggcctacggc gtcctgcgca aagcagcagg cgaggaaagg gggtaaagat agtgagacgc
      421 gtggtcgcag ctcttgtagc ggttgcggtt atggcggcaa cgatggtggt cggtccccca
      481 acaccgacgg ggggcggtcc tctaacgacg gcagccggcc ctgcgtcggc tagtgctcag
      541 gttcctgggg caccgacctg gtgcgggcct tggcaactag ggtggtacgt atccccctcg
      601 tattggtggt acttctgggt gtggaggtgg tgttataacc cctcgattca gggaggctac
      661 tacatagact ggtacagttg gaactggggt ggctttgctg gccctgggca tcccccagga
      721 tatcaatatt ctgtgcccga gtcgtagggt aagaagccca tccttgcggg cttaagcgtg
      781 cgagagaggg ccggggcaac tagagacccc ggccctctct cgcatgtcct agaggcaacg
      841 gtagcgctct tagcgcaagc ttttgctaag gtttctgttc cctgttttct tcgatcatcg
      901 tgttcagcgc cgactcgaac gcgtccggac ccacccgtaa atctcccccg aaggggtcgt
      961 caagtccgac gatcgtggag atgataaaag cgatgcccgc cgctaatgcc gcaaccgcca
     1021 gcatatgtat acggcgattc tccattccca agaagtaaga aaaaagtatt gtgatggtcg
     1081 ctagcatcac cagtacaacc cacaggatag tgggtagacc ctggcgcacg ttaagcagac
     1141 gaacctgtct gtctttatgc aggtcggtga atcggtctag gccctgagcg tagacttcct
     1201 tctcggactc ggtattgggc tcgaagttat ccatggttct cccaagctcg taggcaagtg
     1261 cttctgcgcg tggactcacc tgaccgtctc tcatcagggg ccattcctca tctactacga
     1321 cttggatata agaccaagcg agttcccgaa tctgatctcg cttgggttca ggaaactgtt
     1381 cagcgagccg atgaatctcc actgcggctc cggcttcgct ggccgcgatg ttctcggctg
     1441 cggtgtactt gttcaacacg aggtagcgga aaaacctatt atgaccccga aggtgacgtg
     1501 gagcgcgcca taaattatgc cgatagc
//
LOCUS       DASQSL010000279         1023 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_43428, whole genome shotgun sequence.
ACCESSION   DASQSL010000279 DASQSL010000000
VERSION     DASQSL010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43428"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(542..>1023)
                     /locus_tag="VE844_02820"
     CDS             complement(542..>1023)
                     /locus_tag="VE844_02820"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF025892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HZC00315.1"
                     /translation="GKSPNRRKERSLKEDALALNEEQLELLARYFNEQITFSRHIGAK
                     VEDVQPGHSLIHIDVEDIHLNGAGTLHGGVYASIIDNAMGLSVLALVGVRTATIEMNV
                     HFLGAVSEGRITCESQVVHRTRRTATAEAKVHDSEGNLVAMGTGAFRVFEKKGNAIV"
BASE COUNT          186 a          304 c          295 g          238 t
ORIGIN      
        1 gaatcctcca aagaatggtt gcgcggacgg tcccttaccg acgtgagagc gcttagcgca
       61 tggggtgtgg ctcccgccag ggacccatgt tactcttcat ggcccacctc cttcgctgca
      121 gtgattacgg ccgcgggtta ggctccgagt gccaagcgag aaggcggtct gtggcggtca
      181 cgctaactag cagcgcctca cgccatggtc gcgcttaggc cgaggtttga cccattagtg
      241 tcgctacgga ccggaaggcg gcaacccttc caggaggtgt gggctggata gcagagggcc
      301 tctgtccttt cgcaccctat tagcgcgtct tgcatgttca acatgtcggt ggttagatcc
      361 tggtttacgg cgatgaagcg ggcaagcgcc ttcttcggtt gctgaaagtg actgattgaa
      421 atatggatgc ccaaccacgt tattaaccga atctcttaga catcagccgc ggctgcttca
      481 agcacactgg ctaccctcaa gagctctaac cactatggaa accctacaag gggttgttgg
      541 ctcaaacgat cgcgttgccc ttcttctcaa acacccggaa cgcccctgtt cccatggcca
      601 cgaggtttcc ctccgagtcg tgtaccttcg cctcggctgt cgctgtccgg cgggtgcgat
      661 gtacgacttg actctcgcag gttatacggc cctcgctgac cgccccgagg aagtggacgt
      721 tcatctctat ggtggccgtc ctcacgccta ccagcgccag cacggagagg cccatggcgt
      781 tgtctatgat cgaggcgtag acccctccgt gcagggtgcc tgcgccgttg aggtggatgt
      841 cctcgacgtc gatgtggatt agagagtgtc cgggctggac atcctcgacc ttggccccaa
      901 tgtgccggga gaaggtgatc tgctcgttga aataccgcgc gagaagctct aactgctctt
      961 cattcagggc tagtgcgtcc tccttcaacg aacgctcctt tcttctgttc ggcgattttc
     1021 cgg
//
LOCUS       DASQSL010000280         1465 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_57205, whole genome shotgun sequence.
ACCESSION   DASQSL010000280 DASQSL010000000
VERSION     DASQSL010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1465)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1465)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1465
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57205"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1241)
                     /locus_tag="VE844_02825"
     rRNA            complement(<1..1241)
                     /locus_tag="VE844_02825"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          300 a          507 c          311 g          347 t
ORIGIN      
        1 cggtgaacca tttagccccg ttacattttc ggcgcagagt cactcgacca gtgagctatt
       61 acgcactctt taaatggtgg ctgcttctaa gccaacatcc tggttgtcta agcaactcca
      121 catccttttc cacttaacgt atactttggg accttagctg gtggtctggg ctgtttccct
      181 tttgactacg gatcttatca ctcgcagtct gactcccgcg gataattctc tggcattcgg
      241 agtttgactg aattcggtaa ccctgtgggg gcccctagtc caatcagtgc tctacctcca
      301 gtacgcatct gcctgaggct agccctaaag ctatttcgga gagaaccagc tatctccagg
      361 ttcgattgga atttctccgc tacccacacc tcatccccgc acttttcaac gtgcgtgggt
      421 tcgggcctcc atccagtgtt acctggactt caccctggac atgggtagat cacctggttt
      481 cgggtctacg accacatact cattcgccct attcagactc gctttcgctt cggctccggc
      541 ttctcacctt aaccttgcac gataccgtaa ctcgccggtt cattctacaa aaggcacgct
      601 atcactcatt aacgagctct aactgtttgt aagcgcacgg tttcaggtac tctttcactc
      661 ccctcccggg gtacttttca cctttccctc acggtactag tccgctatcg gtcaccaggg
      721 agtatttagg cttagcgggt ggtcccgcca gattcacacc gaatttcacg ggctcggtgc
      781 tacttgggaa acagactcgg gaggcgcagc gttttcgggt acggggctct caccctctcc
      841 ggcgacccct tccagaggcc ttcccctaac atccgcactt tctcactccc tcaccgtccg
      901 gcagaacagt acgagtcgtc ccacgacccc gcccccacaa cccctgccgg gtatcacatg
      961 gaaacggttt agcctcatcc gctttcgctc gccactactc acggaatcac agttgttttc
     1021 tcttcctgtg ggtactgaga tgtttcactt ccccacgttc cctccgacag cctatgaatt
     1081 cagctggcgg tgacacccca tgacgggtgc cgggtttccc cattcggaca tcctcggatc
     1141 acagctcggt tgacagctcc ccgaggccta tcgcggcctc ccacgtcctt catcggctcc
     1201 tgatgcccag gcatccacca cacgccctta cacacttacc acaacaagat gctcgcatcc
     1261 actatgcaac actcaacaca caaccacacc ccaacccacc acaaccacca ccaccccgac
     1321 aacacagggc gttaggcgat ccaggccagg ggccagaaga cacaccccca acggggtgtc
     1381 ccctcaggac ccaacagtgt gccgagcaat tcatgaacca ggcccttgtg ttccacccag
     1441 cgccacaccc cagaccacag agcgt
//
LOCUS       DASQSL010000281         1224 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_153354, whole genome shotgun sequence.
ACCESSION   DASQSL010000281 DASQSL010000000
VERSION     DASQSL010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153354"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..592
                     /locus_tag="VE844_02830"
     CDS             <1..592
                     /locus_tag="VE844_02830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013061464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF6580 family putative transport protein"
                     /protein_id="HZC00316.1"
                     /translation="IASPESLMNHPRLAVIIGLLVIAAIMRLMPHPPNFTPISAMALF
                     GGTYLEGRIGALVLPLSVLFATDLVIGLHNTMPFVYAGFAATAAMGFGLRTHRGMAWI
                     AGAAGLSSVLFFLLTNFGVWWAGGLYPKDFGGLVACYVAAIPFFQNSLVGDLFYTGVL
                     FGGMGVAERLIPWLRQRPALADDHDPLRPRTRYLGA"
     gene            552..785
                     /locus_tag="VE844_02835"
     CDS             552..785
                     /locus_tag="VE844_02835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018144009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HZC00317.1"
                     /translation="MIRYDLELDTSGLNCPLPILKTKKALATMESGQLLYVIATDPAS
                     VLDFAAFSAKTGNELLESREERGRFYFVLRKGG"
     gene            complement(808..>1224)
                     /locus_tag="VE844_02840"
     CDS             complement(808..>1224)
                     /locus_tag="VE844_02840"
                     /inference="COORDINATES: protein motif:HMM:NF033564.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
                     /protein_id="HZC00318.1"
                     /translation="RVEVRRYQLVPDLSTLPQPEQWKDLQGIARVECERHVGDQVSSE
                     VRYYITSLGQDVGRLAEAVRGHWGIENSLHWVLDVTFREDDSRLRSGYGAENFAVMRH
                     IALNLLKREPSKGSLKRKRYKAALSNEFRANVLFPQ"
BASE COUNT          232 a          347 c          347 g          298 t
ORIGIN      
        1 aatagcttca ccggagtcgc ttatgaatca tccacgtctt gctgtgatca tcggcctatt
       61 ggttatcgcc gctataatgc ggcttatgcc gcatccgccc aatttcaccc ccatctctgc
      121 tatggcccta tttggcggca cgtatttgga aggtcgaata ggggccctag tgctgccgct
      181 gtccgtcctg tttgctaccg atctcgtgat cggtttgcac aacactatgc cgttcgtgta
      241 tgcgggtttt gccgccacag ccgccatggg ctttggcttg cgcacacacc gcggtatggc
      301 atggatcgcc ggggccgccg ggcttagctc ggtgctcttc tttctgctga cgaatttcgg
      361 tgtctggtgg gcaggggggc tttatcccaa ggacttcggt gggcttgtgg cctgctatgt
      421 agcagccatc ccgtttttcc aaaacagcct tgttggcgat ctgttctaca ccggtgtgct
      481 gtttggagga atgggcgtgg cggaacgcct catcccttgg ctccggcagc ggccggccct
      541 ggctgatgat catgatccgt tacgacctcg aactcgatac ctcggggctt aattgtccac
      601 tgccgatcct caagaccaaa aaggccctgg cgaccatgga aagcggccag ttgctttatg
      661 tgatcgccac ggatccggcc tccgttctgg acttcgcggc cttctcggca aagacgggaa
      721 atgaactgtt ggagtctcga gaagaaagag gaagattcta ttttgtgctc agaaaagggg
      781 ggtagcgaca gggcaagcgc gtaatcttca ttgtggaaac aacacgttag ctcggaactc
      841 attgcttaac gcggctttgt aacgtttccg tttgagactg cctttagaag gttcgcgttt
      901 gaggaggttc aaggcgatgt ggcgcatgac agcgaagttc tcggcgccat agccactacg
      961 cagtcggctg tcgtcttccc ggaaagtcac atccaatacc caatgcagcg agttctcaat
     1021 gccccaatgg ccccgcaccg cctcggccag gcgcccgaca tcctgtccca aggaggtaat
     1081 gtagtagcgc acttcactag agacttggtc gcccacgtga cgttcacatt ccacccgcgc
     1141 aatcccttgg aggtccttcc actgttcggg ctggggcagg gtagagaggt cgggtaccaa
     1201 ctgatagcgt cgcacctcga cccg
//
LOCUS       DASQSL010000282         1062 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_2420, whole genome shotgun sequence.
ACCESSION   DASQSL010000282 DASQSL010000000
VERSION     DASQSL010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2420"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..441
                     /gene="efp"
                     /locus_tag="VE844_02845"
     CDS             <1..441
                     /gene="efp"
                     /locus_tag="VE844_02845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014843265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HZC00319.1"
                     /translation="RNLKTGRVIERTFKSGETMEGADVIDKEYQYLYNDGEFWHFMEP
                     ETYEQLSAGASLMEEARPWLKGQETCLITLWNGEPLTVTPPHFVVLAITETDPGMRGD
                     TATGGTKPATLETGAVVKVPLFVEMGERIKIDTRTGEYVARAKE"
     gene            444..>1062
                     /locus_tag="VE844_02850"
     CDS             444..>1062
                     /locus_tag="VE844_02850"
                     /inference="COORDINATES: protein motif:HMM:NF012379.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HZC00320.1"
                     /translation="MPAAWRPTARFEILRLRARVLADLRDFFARRSMLEVETPVLSQA
                     GNCDPHLHSLMTACTGAEELAAIYYLHTSPEFAMKRLLAAGSGSIYQIARVFRDGERG
                     SRHNPEFTLVEWYRVGFDHHRLMEELEALLSQVLGTASCRRSSYAEIFQAYVELDPHH
                     ASLAELHRHTARLGLGFSPYACQDRDDYLNLILSHSIAPKLGWDRP"
BASE COUNT          220 a          288 c          332 g          222 t
ORIGIN      
        1 cgtaatctca agactggccg ggtgatcgag cgcaccttca aatcgggtga gacgatggaa
       61 ggggcggatg tgatcgataa ggaatatcaa tacctctaca acgatggtga attctggcac
      121 tttatggaac ctgagaccta cgagcaatta tccgcaggcg cgagcctcat ggaggaagca
      181 cggccgtggc tgaagggcca agagacctgc ctcatcacct tgtggaacgg ggagccgctc
      241 acggtcacgc cgccgcattt cgtggtcttg gcgatcaccg agacggatcc tgggatgcgg
      301 ggggataccg ccacgggcgg cacgaaaccc gccacccttg agaccggtgc ggtggtcaag
      361 gtaccgctgt tcgtggagat gggagagaga atcaagatcg atacccgcac cggtgaatac
      421 gtcgcgcgcg ccaaggaata agcgtgcctg cagcctggcg gccgacagcg cgctttgaga
      481 tcctgaggct gcgggcacgg gtattggcgg atctccgcga ttttttcgcc cgccgctcga
      541 tgctcgaggt cgaaacgccg gtattgtcgc aggcggggaa ctgcgatccc catctgcaca
      601 gtttaatgac ggcctgtacg ggtgccgaag aattagcggc catctactac cttcatacct
      661 cgcccgagtt tgccatgaaa cggcttttgg ctgccggcag cgggtctatt tatcagatcg
      721 ctcgggtgtt ccgggacggc gagcggggat ctaggcataa cccggagttt accctggtgg
      781 agtggtatcg ggtagggttt gatcaccatc ggcttatgga agagctagag gccctgttaa
      841 gccaggtact tggcacggct tcctgcaggc gatcgagcta tgcggagata tttcaagcct
      901 atgtcgagtt ggatccccac catgcaagcc ttgccgagct tcaccgacac acggctcgac
      961 tcggtctcgg attttcaccg tatgcttgtc aggatcggga tgattatctg aacctgatcc
     1021 tcagtcactc cattgcgccc aagttaggtt gggaccggcc ga
//
LOCUS       DASQSL010000283         1139 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_70902, whole genome shotgun sequence.
ACCESSION   DASQSL010000283 DASQSL010000000
VERSION     DASQSL010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70902"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            141..620
                     /locus_tag="VE844_02855"
     CDS             141..620
                     /locus_tag="VE844_02855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00321.1"
                     /translation="MSTRAKHAVTTPIPVQLSEPEFTEFILPHLTMPKRGPKCKLGYH
                     CLFNLILWVLYTGMPWKCLPIPQDARGKPAIHYTNIYRAFAKGADDGSLQRAFTASVG
                     HLSDEKRLDLRVLHGDGTNTIAKKGVMGLATRATSIRRGRRSSPLPTTTVMCCLHSR"
     gene            641..1006
                     /locus_tag="VE844_02860"
     CDS             641..1006
                     /locus_tag="VE844_02860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00322.1"
                     /translation="MVLLPEGLNALIAKTVGLTLTGAYLNLDAGFDSTHNRKYIFNAG
                     MIPNIKENPRNRKTPKRGRKRFFNAAIHALRTRVDRTFAWEDKFKRLLLRFEHIQPRH
                     FGMKLLGYTLINVREFCGA"
BASE COUNT          266 a          318 c          305 g          250 t
ORIGIN      
        1 actgccagcc gctggatcta agagcgattg ataatttgaa ctggttgcga gtttcgcaca
       61 ttggcctatg ctattgtagt gtttggagaa acctgattta ggaggtagag tccacacgct
      121 gcacacgagg ccagtgaacc atgagcacac gagcaaaaca tgctgtaacc acgccgattc
      181 ccgtccaact ctccgaaccg gagttcaccg aatttatctt gccgcacctc acgatgccca
      241 agcggggtcc gaagtgtaaa ctcggctatc attgtctctt taacctcatc ttgtgggtac
      301 tctatacggg gatgccgtgg aagtgcttgc caatcccgca agacgcccga ggcaagccgg
      361 ccatccacta caccaacatc tatcgcgcct ttgccaaagg ggccgatgat gggtcgctcc
      421 agcgggcgtt tacggccagt gtggggcatc tctcggacga gaagagactt gacctccgcg
      481 tgctccatgg cgatggaacc aacaccatag cgaaaaaggg ggtgatggga ttggctactc
      541 gggctacaag catcagaagg gggagaaggt catcgccatt accgacaaca acggttatgt
      601 gctgtctcca ttcccgatag ctcccgtcaa cgagacggac atggtcctgc tgcccgaggg
      661 tctgaacgcc ttgatcgcca aaacggttgg tctgacactt acaggagcct atctaaatct
      721 cgacgccggc tttgattcca cgcacaatcg caagtacatt ttcaatgccg gcatgatccc
      781 caacatcaaa gagaacccgc gtaatcgtaa aaccccaaag cgtgggcgga agcggttctt
      841 caatgctgcc atccatgccc tgaggacccg cgtcgatcgg acttttgcgt gggaagacaa
      901 gttcaagcgg ctgctgctgc ggtttgaaca tattcagcca cgacattttg gcatgaaatt
      961 gctggggtac accttgatca atgtgcggga gttctgcggt gcctaaaact cgcaaccagt
     1021 tcggtcacaa aatttgtcca catagagccg agctttctct ctgggtgtgc gaggccagga
     1081 ccgtcgaatc gcctcggtca gggcggtcac gtctgttgcc ggcatggcga cctctcctc
//
LOCUS       DASQSL010000284         1613 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_125956, whole genome shotgun sequence.
ACCESSION   DASQSL010000284 DASQSL010000000
VERSION     DASQSL010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1613
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125956"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..231)
                     /locus_tag="VE844_02865"
     CDS             complement(<1..231)
                     /locus_tag="VE844_02865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00323.1"
                     /translation="MDKSEGTELWISECNQFFDKCVELSGKGHHAEARKAMDLIFELL
                     HQIDSSSDDIIFFADEGGSWQVGVNEEKVLPAY"
     gene            complement(268..513)
                     /locus_tag="VE844_02870"
     CDS             complement(268..513)
                     /locus_tag="VE844_02870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00324.1"
                     /translation="MARKRIDWEALEPALRRLKKEELLQILHHAYRELPASRVVSLFG
                     EYVDLTTLHSPPLARKDAAPRRLFKAVQKFHADSLAG"
     gene            complement(581..1141)
                     /locus_tag="VE844_02875"
     CDS             complement(581..1141)
                     /locus_tag="VE844_02875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013651402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZC00325.1"
                     /translation="MLIGYARVSTAEQTLELQTDALTTAGCEKLFTEVAGGARTERPG
                     LDQAIEFCRSGDTLVVWKLDRMGRSIAHLIATIRQLEQRGVGFCSLTEQIDTTTPSGR
                     LIFHVFGALAEFERDLIRERVQAGLRSARARGRMGGRPPISAEIKAIAQVLLADKSLS
                     SKQICERLGIAKSTLYKHARPVPGKL"
     gene            1335..>1613
                     /locus_tag="VE844_02880"
     CDS             1335..>1613
                     /locus_tag="VE844_02880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4158 domain-containing protein"
                     /protein_id="HZC00326.1"
                     /translation="MPVDFLTEEQKRRYGRYAGEPSALQLARYFHLDDNDLALIGRRR
                     GEHNRLGFTLQLVTARFLGTFLADPTEVPAGVVAHIARQLGIHDRACLP"
BASE COUNT          337 a          505 c          410 g          361 t
ORIGIN      
        1 ataagcaggc agtaccttct cctcattcac acccacctgc cacgaaccgc cctcgtctgc
       61 gaaaaaaatg atgtcgtcgc tgctgctatc tatctggtgc agaagctcga agatcaggtc
      121 catcgctttg cgagcttcag cgtgatgccc cttgccactt aactcaacgc atttgtcgaa
      181 gaactgattg cattcgctga tccatagctc ggtgccctcg gacttatcca tgaagttgcg
      241 tgagttgaca cggaatgact cgtagtatta gcccgccaga ctatcggcat ggaacttttg
      301 cacggctttg aataaccggc gtggcgcagc gtcttttctt gcgaggggtg gtgaatggag
      361 cgtcgtgaga tccacatatt caccgaagag cgacacgacc cgggaagcgg gcagttcccg
      421 ataggcatga tgcagaatct gcagtagctc ttccttcttt aacctacgca gcgcaggctc
      481 aagagcttcc cagtcgatgc gctttctggc cataggctag gccaccctcc aaacaaggcc
      541 ctgtgggcat agaggggagg cgcacccgat tccccgagga ctacaatttt ccgggtaccg
      601 gtcgagcatg cttgtaaagg gtacttttgg caatgccaag ccgttcacag atctgtttcg
      661 acgataaact cttatccgcc agcagtactt gtgctattgc tttgatttcc gctgatatcg
      721 gcggtcgtcc gcccatacgc ccccgtgcgc gggccgacct caggcccgcc tgcacacgct
      781 cgcggatgag atcccgctcg aattcggcca gcgcaccgaa cacgtgaaag atcaatcgcc
      841 cgctcggagt ggtcgtatcg atctgctcgg tcagcgagca aaaccccacc ccccgctgct
      901 cgagctgtcg gattgttgca atcagatgcg ctatggagcg gcccatccga tcgagtttcc
      961 acaccaccag cgtatcgcct gagcggcaaa actcgatcgc ttggtccaga cctggacgtt
     1021 ctgtccgtgc cccgccggca acctcggtga acagtttctc gcagcccgcg gtggttaggg
     1081 cgtcggtctg gagttccagc gtctgctcag cggtggagac ccgtgcatag ccaatcagca
     1141 tagtccatat actagctttt aaatccagtt tatggaaatt gatttacgga ccggtttata
     1201 gactactatc accccggtga gccgtgccct ttcgctgccc gatggcacgt ccacaaaaca
     1261 cctgttttac ggacggccca agcgcatcgc tcagcgccaa tagaactcct ccaaaccgat
     1321 aacgagaaaa caccatgcct gttgatttcc tcaccgaaga gcaaaaacgc cgttatggcc
     1381 ggtacgccgg tgaaccgtcg gcgctacaac tcgcccgtta cttccacctc gacgataatg
     1441 acctggcgct catcggccgt cgccggggtg agcataaccg gcttggcttc accttacagc
     1501 tcgtcaccgc ccgttttctc ggaacttttc tcgccgatcc caccgaggta cccgccggcg
     1561 ttgtcgccca tattgctcgc caactcggca tccatgatcg cgcctgcttg cca
//
LOCUS       DASQSL010000285         1475 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_125957, whole genome shotgun sequence.
ACCESSION   DASQSL010000285 DASQSL010000000
VERSION     DASQSL010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1475)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1475)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1475
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125957"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..207
                     /locus_tag="VE844_02885"
     CDS             <1..207
                     /locus_tag="VE844_02885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00327.1"
                     /translation="PAVLQQDSEDVALLTPITPVAKRSVRGKPTTADDPLWKLIGIGH
                     SGKGDVSENKHKYLAEAYLHHKQA"
     gene            204..638
                     /locus_tag="VE844_02890"
     CDS             204..638
                     /locus_tag="VE844_02890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013824352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HZC00328.1"
                     /translation="MRTRRASPARRILVDASAYFALLDQDDANHSQALTISRRLIAEG
                     WRLFTTSFVLAETHALLLNRLSQAIATRFLRDMEHSPTTLVWVTPADVQRAKAIIYQY
                     DDKDFSLTDATSFAVMERLRVPAAFTFDRHFAQYGFTALTAT"
     gene            complement(696..893)
                     /locus_tag="VE844_02895"
     CDS             complement(696..893)
                     /locus_tag="VE844_02895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00329.1"
                     /translation="MPTSSEDDMSTHAHYHGYRKHRGKLCLQCFHYRRVSEEEEACEA
                     YERWLTYPTTKRADCDQYVSR"
     gene            complement(940..1302)
                     /locus_tag="VE844_02900"
     CDS             complement(940..1302)
                     /locus_tag="VE844_02900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00330.1"
                     /translation="MAEQYPGIQFEDIPLEEARRIGRGPRMDPAIYQALKEKIQLLDN
                     TASRLTLPEGTSQTTMKNRLLRVAAELNIPITVRRVPGGLLFWRSSDEDVQQAKEVGA
                     RLQTGQRRPQRRPRGRRR"
BASE COUNT          294 a          454 c          410 g          317 t
ORIGIN      
        1 cctgccgtct tacagcagga cagtgaggat gtggccctgc tcacacccat cacgccagtg
       61 gccaagagaa gtgtcagggg taaaccaacc actgcagacg accccctgtg gaaactcatc
      121 ggcattgggc actccggaaa aggcgatgtc tcagaaaaca aacacaagta cctggctgag
      181 gcgtatctgc atcacaaaca ggcatgagga ctcgccgtgc ttccccggca agacgcatcc
      241 ttgttgatgc ctccgcctac tttgccctgc tggaccaaga tgacgccaac cattcgcagg
      301 ccctgactat tagtcgccgc ttgatcgcgg aaggctggcg cctctttacc accagcttcg
      361 tccttgccga aacccatgcg ctcctcttga atcggttaag ccaggcgatt gccaccagat
      421 ttctccgaga catggaacac agcccaacca ccctagtatg ggtgacgcct gcggatgtgc
      481 aacgggccaa ggccattatc taccagtatg atgacaaaga tttttccctc accgacgcca
      541 cgagctttgc cgtcatggag cggcttcgtg tgcccgccgc gttcaccttt gaccgccact
      601 ttgcccagta tggcttcaca gcgctgacgg ccacttaagg gggtctctca taggggccga
      661 cccccaacaa gcctgttacc gggggccata aggcatcaac gggacacgta ctgatcacag
      721 tccgcacgtt tcgttgtggg gtaagtgagc cagcgttcgt aggcctcgca ggcttcctcc
      781 tcttcagaga cacggcggta gtgaaagcac tgcagacaga gcttgccccg atgcttgcgg
      841 tagccgtgat aatgggcgtg cgtcgacata tcgtcctcac tgctcgtggg catgggctcc
      901 ctccgcccct ttgacaacta tcgctgtccg cttaatcaac taacgccggc gccctcgggg
      961 gcgcctctgg ggtcgccgct ggccggtctg gagccgggcc ccgacctctt tggcctgctg
     1021 gacatcctca tcagaggaac gccagaagag caggcctccg gggacgcgtc tcacggtgat
     1081 agggatattg agttctgcgg ccacgcggag gaggcggttt ttcatggtgg tttgactcgt
     1141 tccctcagga agcgtgaggc gggaggcggt attgtcaagc aattggattt tttcctttaa
     1201 ggcctgatag atcgctgggt ccatccgggg gcctcggcct atgcggcgag cttcctctaa
     1261 ggggatgtct tcgaactgaa tgccagggta ctgttcggcc atgaggtcct tctcctcttc
     1321 tatttctatg cgcccccggc caagagcggt ctgatcgcct cataaaaggg cccctgccgg
     1381 ctctgcacct gttcataaca gatgaacgcc atggcgttcc agatcagatc tttctcctcc
     1441 tccgtaatgg cgcgacgcgc gcagaagtcc agaaa
//
LOCUS       DASQSL010000286         2996 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_153381, whole genome shotgun sequence.
ACCESSION   DASQSL010000286 DASQSL010000000
VERSION     DASQSL010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2996
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153381"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(207..2873)
                     /gene="acnA"
                     /locus_tag="VE844_02905"
     CDS             complement(207..2873)
                     /gene="acnA"
                     /locus_tag="VE844_02905"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018952423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HZC00331.1"
                     /translation="MNNSYNTRTTLKVGAIQYEIHSLKRLESRLNTINRLPYSLKILL
                     ENLLRCEDGINVTQDDIAALANWDPKAEPAQEIAFTPARVLMQDFTGVPAVVDLAAMR
                     DAMQKLGGDPARINPLSPAELVIDHSVQVDFFGVPEALEKNAALEFKRNEERYRFLRW
                     GQQAFSNFQAVPPDTGIVHQVNLEYLARTVFSQKKNGLMQAYPDTLVGTDSHTTMINA
                     LGVLGWGVGGIEAEAAMLGQPITMLIPQVVGFKLTGGLREGVTATDLVLTVTERLRKK
                     GVVGKFVEFFGEGLDHLPLADRATLANMAPEYGATCGIFPIDEETLNYLRLSGRPLDQ
                     IALVEAYAKAQGLWREKGGLEAHYSDMLELDMDTVEPSLAGPKRPQDRVGLSAVKQIY
                     REALAPMTKDRTKSGKITLQTDSQSYELQDGAVVIAAITSCTNTSNPSVMVGAGLLAK
                     KAIEQGLARKPWVKTSLAPGSLVVTDYLKKAGLMPYLEALGFYLVGYGCTTCIGNSGP
                     LPEAISQGVTQGDLVVAAVLSGNRNFEGRIHAEVKINFLASPPLVVAYALSGSVDIDL
                     TTEPLGIGKEGQPVYLKDIWPSQREIMDTIAATLDSRMFAASYSNVFAGDKRWASMDV
                     PSGKLYRWDDHSTYVRNPPYFEHMSMQPEGITPIQGARVLTLLGDSITTDHISPAGSI
                     KANSPAGRYLIEHGVALQDFNSYGARRGNHEVMMRGTFANIRLRNRLVPGVEGGMTLH
                     LTSGEPMSIYDAAMRYQEEGVPLVIIAGKEYGTGSSRDWAAKGTRLLGVRAVITESFE
                     RIHRSNLVGMGVLPLTFKESETAESLGLTGKEIYDIEGLARGVKEVTVVAKCEDGQAI
                     RFKANVRVDTPKEWEYYNHGGILPYVLRQLAA"
BASE COUNT          628 a          860 c          880 g          628 t
ORIGIN      
        1 gcgatcattc gattagacaa atacttcacc gtcgatgagg tagtgtttgc agagaaaggt
       61 gacttattgt tgctgggagc aaggactttg gaaggattaa atctgaccat tgactcaaga
      121 aagaaaaaat tacttgcctc aggaccgatc cccgctgcct aaaacaacct tagcacgaga
      181 aggaagaggg agatatcctt atacgttcaa gccgcaagct gccgcagcac atacggcaga
      241 ataccgccgt gattatagta ttcccactcc ttcggtgtat cgacacggac gttagcctta
      301 aaacggatcg cctgtccatc ctcacacttg gcaacgacag tcacctcctt tactcccctc
      361 gccagacctt cgatgtcata gatctcttta ccagtcagcc caagactttc agccgtctcg
      421 ctctctttga aggtgagtgg caagacaccc ataccgacga gattggagcg gtggatacgc
      481 tcgaagctct cggtgatcac ggcgcgtaca cccagaaggc gtgtgccctt ggctgcccaa
      541 tcgcgcgatg agccggtgcc gtattccttg ccggcgatga tgaccagcgg cacaccctcc
      601 tcttgatagc gcatcgccgc atcatagata ctcattggtt cgccggaggt caggtgcagg
      661 gtcataccgc cctcaacccc aggcaccaag cggttgcgca ggcggatatt ggcaaaggtg
      721 ccacgcatca tgacctcgtg gttgccgcgg cgcgcaccgt aggagttgaa gtcctgcaga
      781 gcgacgccgt gctcgatcag gtatcggccc gccgggctat tggccttgat ggagcctgcc
      841 ggggagatat ggtcggtggt gatcgaatcc ccaaggagcg tcagcacccg cgcaccctgg
      901 atcggcgtga taccctccgg ttgcatgctc atgtgctcga agtacggtgg gttcctgaca
      961 taggtggaat gatcatccca cctgtaaagc ttgcccgagg gcacatccat actggcccaa
     1021 cgcttgtcgc cagcgaacac attgctgtag ctcgctgcaa acatccttga gtcaagggta
     1081 gcggcgatgg tgtccatgat ctcacgttgc gaaggccaga tgtccttgag gtacacaggc
     1141 tgaccttctt tacctatacc cagcggttca gtggtgaggt cgatgtccac gctgccagag
     1201 agggcataag cgacgacgag cggcggtgag gccagaaagt tgatcttgac ctcggcatga
     1261 atgcggccct cgaagttgcg gttgccggag agcaccgcgg cgacgaccag atcgccttga
     1321 gtcacgcctt ggcttatagc ttccggcaag ggtcccgagt taccgatgca ggtggtgcag
     1381 ccgtagccga ccaggtagaa gcccagggcc tcgagatagg gcataagacc cgcttttttc
     1441 agatagtcgg tcacaacgag cgatccgggt gcaagacttg tcttgaccca gggcttgcgt
     1501 gccagacctt gctcaatcgc ctttttggcc aagagacctg cacccaccat caccgagggg
     1561 ttcgaggtat tggtacagga ggtgatcgcc gcgatcacga ccgcgccatc ctgcagctca
     1621 tagctctggc tatcggtttg aagggtgatc ttaccgctct tggtgcggtc tttggtcatg
     1681 ggcgcgagag cctcgcgata gatctgcttg accgcgctta acccgacgcg atcttgcggg
     1741 cgcttgggac cggcgaggct cggctccacg gtgtccatat cgagctccag catgtcgctg
     1801 tagtgggctt caagcccccc tttctcgcgc cagagccctt gcgccttggc gtaagcctca
     1861 acgagggcga tctgatccag ggggcggccc gacagacgca gataattcaa agtttcctca
     1921 tcgatgggga agatgccaca ggtcgcgcca tattcggggg ccatgttggc gagggtggcg
     1981 cgatcggcaa gcggcagatg gtcaagacct tcgccgaaga actccacgaa ctttccaacc
     2041 acgcccttct tgcgcagcct ctcggtcacg gtgagcacca gatcggtggc ggtcacgccc
     2101 tcgcgcaagc caccggtgag tttaaagccc acgacttggg ggatcagcat ggtgataggc
     2161 tgaccgagca tggccgcctc ggcctcgatg ccgcccacac cccagccgag cacacccaga
     2221 gcattgatca tcgtagtgtg cgaatcggtg ccgaccagcg tgtccggata ggcctgcatg
     2281 agaccgtttt tcttttgcga gaacacggtg cgggccaggt attcgagatt gacctgatgg
     2341 acgataccgg tgtcgggcgg taccgcctgg aagttggaga acgcctgttg gccccagcgc
     2401 aaaaaccggt aacgctcctc attgcgcttg aactcgaggg cagcattctt ttctagggcc
     2461 tcgggcacgc cgaaaaaatc gacctgcacc gagtggtcga tcacgagctc ggccggcgag
     2521 agcggattga tccgggccgg atcgccgccg agcttctgca tggcatcgcg catggcagcc
     2581 agatccacga ccgccggcac accggtgaag tcctgcatca agacccgcgc cggggtaaag
     2641 gcgatctcct gagccggttc ggccttggga tcccagttcg caagtgcggc gatgtcgtcc
     2701 tgggtgacgt tgatgccgtc ctcgcagcgc aagagattct cgagcaggat cttaagcgag
     2761 tagggcagcc tattgatagt attgagacgg ctttccaagc gcttgaggga atggatctca
     2821 tactggatag cgcctacctt gagggtagtg cgggtgttat agctattgtt catgtgctct
     2881 ccaagactca ggatcatggt ggaaactata acattttatg tactattgcc aatgggatcg
     2941 ataggctcca ggtcagacta gcttccgcaa cgcgcgcctg tgccgcaagt gctctt
//
LOCUS       DASQSL010000287         1604 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_2444, whole genome shotgun sequence.
ACCESSION   DASQSL010000287 DASQSL010000000
VERSION     DASQSL010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1604)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1604
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2444"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..113)
                     /locus_tag="VE844_02910"
     CDS             complement(<1..113)
                     /locus_tag="VE844_02910"
                     /inference="COORDINATES: protein motif:HMM:NF039417.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6364 family protein"
                     /protein_id="HZC00332.1"
                     /translation="MQTKLTLRLDKKLIEAVKRYAEISGKSLSQLVADYFSL"
     gene            complement(248..1450)
                     /locus_tag="VE844_02915"
     CDS             complement(248..1450)
                     /locus_tag="VE844_02915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020158610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC00333.1"
                     /translation="MRIQDLMQLASQSLLAYRLRSVLTVLGIVIGIAAVVLLTAIGKG
                     IHHFVLTEFSQFGTHLITVVPGKARTLGLSAGVVSNVRPLSLADAEALQRLKEVLATV
                     PVVQGNVQVELGRRLRRATVFGVGPRVPEVWRMSVGFGRFLPPDDYRSARPFAVLGAR
                     VHKELFPDHLHSLGARIRIGGDPYRVIGVMAPKGQMLGFDLDDTVYLPVGRAMPMFNR
                     ESLMEIDLLYRAGADLDEVAQAIKQLLIRRHGHEDFTLITQKQMLDSLDSMLEVLTLG
                     VAVLGGISLAVGGVGILTVMTIAVSERIAEIGLLRAIGAERRQILWFFLSEAIVLGGT
                     GGLIGVVLGIALVGAVAAVFPALPVNLAWGYVALALVLSLLIGLLAGVLPALRAASLQ
                     PLEALRAE"
BASE COUNT          381 a          511 c          453 g          259 t
ORIGIN      
        1 agggaaaaat aatccgccac cagctgcgac agcgatttgc cggagatctc cgcgtaacgt
       61 ttgaccgcct caatcagctt cttgtccaga cggagcgtaa gttttgtttg cacgcacctg
      121 cctcaatgac gtacataatg aattattatt atacgtctct cagttaagga tcaaggaccg
      181 tcctttgttc tgtcagccgt cgagatcgac gggcgtggca ttcaccacaa taaggcaccg
      241 tcgtcggcta ctccgcacgc aaggcctcaa ggggctgtag actcgcagcc cgcaaggcgg
      301 gcagcacacc tgcaagaagc ccgatcaaga gcgacaggac caaggctaag gccacataac
      361 cccaggcaag gttgacaggc agcgcgggaa acaccgccgc taccgctcca accagggcga
      421 tcccgagcac cacaccgatc aagccgccgg ttcctccaag cacgatcgcc tcgcttaaga
      481 aaaaccagag gatctggcgg cgctcggcgc caatagccct caacagccca atctcggcaa
      541 tgcgttcaga tacggcgatg gtcataacgg tcaggatccc cacccccccc acggccagcg
      601 agatcccgcc cagcacggcc actccgagcg tcaagacctc aagcatggaa tcgaggctat
      661 cgagcatctg cttttgggta atcaaggtaa aatcctcatg accatgacgg cggatcagga
      721 gctgcttgat cgcttgggcg acctcatcga gatccgcacc cgctcggtag agcagatcga
      781 tctccatcaa gctctcgcga ttaaacatag gcatggcccg gcccacggga agataaacgg
      841 tatcatcgag gtcgaaaccg agcatctgcc ctttcggcgc catgaccccg atgacgcggt
      901 agggatcgcc gccgatccgg atccgcgcgc caagggaatg gagatgatcc gggaacagct
      961 ccttatgcac cctggcgccg agcacggcga atggccgcgc gctgcggtag tcgtcggggg
     1021 gtagaaatct cccgaaaccc acactcatcc gccatacctc cggaacccgc ggcccgaccc
     1081 cgaatacggt ggctcttcgt agcctccggc ccaactccac ctggacgttg ccttggacga
     1141 cgggcaccgt ggcgagcacc tctttgagtc tttgcagggc ctcggcatcc gccagggata
     1201 gaggacgcac attactgacg acaccggccg ataacccaag ggttcgagcc ttaccgggca
     1261 cgacggtgat cagatgggtg ccaaattggc tgaactcggt gagcacaaaa tgatgaatgc
     1321 ccttgccaat ggcagtgagc aggacgactg ccgcgatccc gatgacgatg ccaagcacag
     1381 taagcaccga gcgcaggcga taggcgagta gcgactgaga cgcgagctgc atgagatcct
     1441 gtatccgcat gggtatcagc gccgggctaa ggcccgcacc gggtcaagcc ttgctgcgcg
     1501 gctcgccggc atcacaccaa aggcaatccc gaggactagg gctaccatcg aggcgccagc
     1561 cagcgcccag ccgggcaaag taaggagcaa cgccggatac agcg
//
LOCUS       DASQSL010000288         2503 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_125960, whole genome shotgun sequence.
ACCESSION   DASQSL010000288 DASQSL010000000
VERSION     DASQSL010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2503
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125960"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1174)
                     /locus_tag="VE844_02920"
     CDS             complement(<1..1174)
                     /locus_tag="VE844_02920"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018935792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HZC00334.1"
                     /translation="MGKNVVVIGTQWGDEGKGKVVDLLTDRVSAVVRFQGGHNAGHTV
                     VIDGVKTILHLLPSGILRDNVQCLIGNGVVVSLKALTEELDMVEKNGVPARERLWISE
                     ACPLILPYHVELDHAREQARGKFAIGTTGRGIGPAYEDKVARRALRVGDLWHRERFAA
                     KLGEVLDFHNFVLTQYYKRKSLDFQSVLDETLAHAEPILPLATDIAERLYRHQQRGEN
                     VLFEGAQGTLLDIDQGTYPYVTSSNTTAGGAATGTGLGPKSLDYMLGITKAYTTRVGS
                     GPFPTELFDEMGEHLARRGHEFGATTGRPRRCGWFDAVALRRAKQMNSLSGLCITKLD
                     VLDGLDIIRVCTGYRLQGEVRSTPPVGAEAMASCEPVYEELPGWKGSTVGIKDYARL"
     gene            complement(1182..2384)
                     /locus_tag="VE844_02925"
     CDS             complement(1182..2384)
                     /locus_tag="VE844_02925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008930687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HZC00335.1"
                     /translation="MSLEDRWLLPEGIDELLPPQAMRLESLRRRLLDLFQSWGYELVI
                     PPLIEYLESLLTGMGHDLELQTFKITDQLTGRLMGIRADMTPQAARIDARLKHNAPTR
                     LCYLGPVLHTLPNGFDRSRNPFQVGAELYGHRGIESDAEVILLMLESLRLTGIAAVWL
                     DLGHMGVFRGLARQAGLNPEQQGIVFDILQRKAQPELETYLKDARIAPWVMDMFIALM
                     DLNGDAAILERARCVLAPACPEVQQALDELANIAHLVQARTSEKNHFHFDLAELRGYH
                     YHTGVMFAAYIPGYGQALARGGRYDDIGRVFGRARPATGFSTDLKTLVSLQPFAFEPA
                     GRVYAPWPSDPQLAAVIERLRKAGNHVICALPGQPGGSLELRCNKRLERQGEQWVVVD
                     RVEPEFLE"
BASE COUNT          547 a          785 c          679 g          492 t
ORIGIN      
        1 gtaatcttgc atagtctttg atccccacgg tagatccctt ccagccaggc aactcctcat
       61 agacaggctc acaactggcc atagcttctg cgccgaccgg cggagtcgag cgcacctccc
      121 cttgtaaacg gtagccggtg catacccgga taatatcgag cccatccagc acatcgagct
      181 tagtgataca gaggcctgag aggctattca tttgcttggc ccggcgcagc gctaccgcgt
      241 cgaaccaacc acagcgccgg ggacgcccgg ttgtggcgcc gaattcgtgg cctcggcgcg
      301 cgaggtgttc gcccatctcg tcaaagagct cggtgggaaa tggcccggag cccacgcggg
      361 tggtgtaagc cttggtgatc cccagcatat aatcgaggga ctttggaccc agacctgtgc
      421 cggtagccgc cccgcccgcc gtggtgttcg aagaggtgac ataggggtag gtgccctgat
      481 cgatgtcgag caaggtccct tgcgctcctt cgaacaggac gttttcgccc cgctgttgat
      541 gccggtatag gcgctcggcg atatcggtgg ccagcggcag gatcggttct gcatgagcca
      601 aggtctcatc caacacagac tgaaaatcta aagatttacg cttgtagtat tgggtaagga
      661 caaagttatg gaaatccagc acttcgccaa gcttagcggc aaatcgctcc cgatgccaca
      721 gatcgcccac gcgtaaagcg cggcgcgcta ccttatcttc gtaggcgggc ccaatgcccc
      781 gcccggtcgt gccgattgca aatttacccc gcgcctgttc gcgggcatgg tccaactcca
      841 catgataggg caggatcaag ggacaggcct cgctgatcca aagacgctcg cgggcaggca
      901 cgccattttt ctccaccata tcgagctcct cagtcagcgc ttttagggat actacaacgc
      961 cattaccgat gaggcattgc acattatctc gcaggatccc cgagggcagc agatgcaaga
     1021 tggtcttaac cccgtcgatg acgaccgtat gaccggcatt atgcccgccc tggaaacgca
     1081 ccactgcgct tacccgatcg gtcaatagat cgaccacctt gcccttgcct tcatcacccc
     1141 actgggtgcc tatgaccacc acattcttgc ccatgtcttt cctattcgag gaattccggt
     1201 tccactcgat cgaccaccac ccactgctca ccttgccgtt ccaggcgctt attgcaccgc
     1261 aattccaaag acccgcccgg ctggcctggt aacgcgcaga tgacgtggtt tccagcttta
     1321 cgcaagcgct cgatcacggc agccaactgg ggatcgctcg gccaaggtgc atagaccctc
     1381 cctgcaggct cgaacgcaaa cggctgtaga ctgaccaagg tcttgagatc ggtactgaat
     1441 cccgtggccg gtcgagcccg cccgaagacc cggccgatgt catcatacct gcctccgcga
     1501 gcgagcgcct ggccatagcc cgggatatag gccgcaaaca tcacgccggt atgatagtga
     1561 tagccgcgga gctcggcgag atcaaaatga aaatggttct tctcggaagt ccgcgcctgg
     1621 accagatgtg cgatattcgc cagctcatcg agcgcctgtt gcacctcggg acaggcggga
     1681 gccagcacgc accgcgcgcg ttccaagata gcggcgtccc cattgagatc catcaaggcg
     1741 ataaacatat ccatgaccca gggcgcgatc cgagcgtctt tgagatacgt ttctagctcc
     1801 ggttgggcct tgcgttgcag gatatcgaac acgatcccct gctgctcggg attgaggccc
     1861 gcctggcggg ccaggccacg aaagacgccc atgtggccta gatcgagcca gacagcggcg
     1921 atcccggtga gcctcaagct ctccagcata agcagaatca cctccgcatc actctcgatg
     1981 cccctgtgtc catacagctc cgcccctacc tggaaggggt tgcgcgacct atcaaagcca
     2041 ttgggcaagg tatgcaagac cggtcccaga taacacaggc gcgtcggtgc attatgtttc
     2101 aagcgggcat cgatccgcgc cgcctgtggt gtcatgtcgg cccggatccc cattaatctt
     2161 ccggtaagct ggtcggtgat cttaaatgtt tgcaactcaa gatcatgccc catcccggtc
     2221 aataaggatt ccagatactc aatcagggga gggatcacca gttcataacc ccacgactgg
     2281 aacaggtcca gaaggcggcg gcgcaatgat tccagccgca tcgcttgcgg cggcagcagc
     2341 tcatcgatgc cttctggcaa caaccagcgg tcttccaaag acatgggttc aattcaccca
     2401 atacagcaga atcacaccga gcagcataca cgttaagccg ccgaatcgca gggtagcatc
     2461 atctaactgg gcaagcagga gaaaggcctt acgcgcgctt ggc
//
LOCUS       DASQSL010000289         1371 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_153398, whole genome shotgun sequence.
ACCESSION   DASQSL010000289 DASQSL010000000
VERSION     DASQSL010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1371
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153398"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..657)
                     /locus_tag="VE844_02930"
     CDS             complement(<1..657)
                     /locus_tag="VE844_02930"
                     /inference="COORDINATES: protein motif:HMM:NF033550.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3 family transposase"
                     /protein_id="HZC00336.1"
                     /translation="MGRRCRSATVKDIAEELHLDWETVKELDKQYMRAQLARTPTPGP
                     KVIGIDEISIRKGHDYRIVVSDLLRGRAIWFGGQDRKQASMKQFYDWLGEKRAQRIRL
                     AVMDMWKAFYNASKQAAPNAAILYDKFHVMRHLGEALDEVRKAEYARLKGQDRKFIKG
                     QKYTLLLRRENLSLKGRRALKTLLAANKRLNTAYMLKESFGQLWSYEREGWARRFFEN
                     W"
BASE COUNT          280 a          442 c          352 g          297 t
ORIGIN      
        1 ccagttctcg aagaaccgcc gtgcccagcc ctcccgctca tagctccaca actgcccgaa
       61 ggactccttc agcatatacg ccgtgttcag tcgcttgttc gctgcgagca gcgtcttcaa
      121 cgcccggcga cctttcaacg agaggttctc ccggcgcaac agcagcgtgt acttctggcc
      181 cttgatgaac ttgcgatcct gacctttaag ccgagcgtac tcggccttgc gcacctcatc
      241 gagcgcctcg ccgaggtggc gcatgacgtg aaacttgtca tacaggatcg ccgcgttcgg
      301 tgccgcctgc ttgctcgcgt tgtaaaacgc tttccacatg tccatcacgg ccaagcggat
      361 gcgctgcgcg cgcttttctc cgagccaatc gtagaactgc ttcatgctcg cctgcttgcg
      421 gtcctgaccg ccaaaccaga tcgcacggcc tcggagcagg tcgctgacca cgatccgata
      481 atcgtggcct ttgcggatcg agatctcgtc gatgccgatg accttcggcc caggggttgg
      541 cgtgcgggcg agttgggcgc gcatgtactg cttgtccagc tctttgaccg tctcccagtc
      601 cagatgaagc tcctcggcga tgtccttgac cgtcgccgag cgacagcgcc gacccacgtg
      661 agtcgggcaa agcgcttggt gtagaacgga ttgtctgcca ggaagtccag ctgttcgcgc
      721 ttcaccttgc cgcagcgccg gcaatacacg cgtcgcactt ccacttccaa gtagatgcgc
      781 aggtcgccgc aaccaaggtc ccggacccat cgctcgcgtc ggtcgtacca accccggtat
      841 actcgaccac acgccccaca acgcgttttt ttgagcaccg tcgcacagtg ataacacgcg
      901 ccttggggtc gccgaaaacc ccgcgcaccg tcggtagcgg acgaaacccg gggaaggcat
      961 acgcgtccca gagccgccgc tttcgctttg ttgatctggc catcggaaac ataatgccaa
     1021 attcagcgac ctcgcggaat gcacgaaagc ccgcaataat gggtgtattc gacacgttca
     1081 acccctaaaa tgacccacac gatttccaga agacccaata aattcttcct gtgaattctc
     1141 cggagcttaa gcagcagcct tgagttcctg ttcttcaggg aactccactg ccgccccttg
     1201 gcggtgactt ttcgccattt cgtcagcact atagacgttg ctccaaaaaa tttacaggaa
     1261 gagaaacgct atcttgccct tgcccttgcc tgaaatcatt cggcaggcgg ctcaagccaa
     1321 ggcgtaatta cctgagattc ctgggattaa tgagaagtta cttgctttaa c
//
LOCUS       DASQSL010000290         1632 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_16520, whole genome shotgun sequence.
ACCESSION   DASQSL010000290 DASQSL010000000
VERSION     DASQSL010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1632
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16520"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1346
                     /gene="infB"
                     /locus_tag="VE844_02935"
     CDS             <1..1346
                     /gene="infB"
                     /locus_tag="VE844_02935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010942233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HZC00337.1"
                     /translation="GHEAFTAMRARGAQATDIVVLVVAADDGVMPQTVEAITHAHAAN
                     VPIVVAINKIDLPDANPDRIKQQLSDHGLVPEQWGGETIYVEVSAKRKQNIDELLEMI
                     LLQAEILELRANPSRRGQGVVVEAELDKTRGPVATVLVQRGTVHVGDAFVVGVHYGRI
                     RALLNDRGEKIQEVGPATPVEVTGLSGVPLAGDAFQVVTDEKKARQIATLRQQRQREE
                     HIQRTSRVTLEDLYRQIKEGEVKELNVLLKSDVQGSAQAVRDALERLSTSEVRLRVIQ
                     GAVGGITESDVMLASASNAIIIGFNVRPTPKANELAEREGVDLRLYTIIYDLIADVKA
                     ALEGLLEPEVAEHIMGRAEVRETFHIPRVGVIAGCYVTEGTITRNADCRLLRDNIVVY
                     QGRIGSLRRFKEDVHEVHSGYECGIGLDRFSDIKRGDIVEPFVRERVAKKLAAQS"
     gene            1351..1632
                     /locus_tag="VE844_02940"
     CDS             1351..1632
                     /locus_tag="VE844_02940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005011569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF503 domain-containing protein"
                     /protein_id="HZC00338.1"
                     /translation="MIVGVCTIDLRIPGIDSLKGKRSVVRKIKERVKNTFNVSIAEVE
                     DLDKLQRVGLGIAFVSNDSKHIHSTLSKVVNFIDHMYVADIIDYHIEVW"
BASE COUNT          348 a          434 c          521 g          329 t
ORIGIN      
        1 caggtcacga ggcctttacg gcgatgcggg cccgcggtgc acaggccacc gatatcgtcg
       61 tgctggtcgt ggccgctgat gatggggtca tgccgcagac agttgaagcc atcacccatg
      121 cccacgcggc gaacgtgccg atcgtggtgg ccatcaataa gatcgatctg ccggacgcca
      181 atcccgaccg catcaagcag cagctctccg accatggctt ggtccctgag cagtggggtg
      241 gtgaaaccat ctacgttgaa gtatcagcga agcgtaagca gaatatcgat gagttgctgg
      301 agatgatctt gctgcaagcg gaaatccttg agctgcgtgc gaacccttcg cggcgcgggc
      361 aaggggtggt tgtcgaggcc gagctcgata aaacccgcgg gcctgtggcg acggtgctgg
      421 tacagagagg cactgtgcac gttggcgatg cctttgtggt cggcgtgcac tacgggcgca
      481 ttcgcgccct gctgaacgac cgtggggaga agattcaaga agttgggcca gcgacgccgg
      541 tagaggtcac cggcctgtcg ggcgtaccgc ttgcgggcga tgccttccag gtcgtgaccg
      601 acgagaaaaa ggcgcggcaa atcgccactc tgcgtcaaca acgccagcgg gaagagcaca
      661 ttcagcgcac ctcacgggtg acgctcgagg atctgtaccg ccagattaag gagggcgagg
      721 ttaaagagct caatgtgctt ttgaagtccg atgtgcaagg ctccgcacaa gccgtgcgcg
      781 atgccttgga aaggctcagc accagcgagg tccgtttgcg tgtgatccag ggagcggtcg
      841 gcggcattac ggagagcgat gtgatgctcg cctccgcctc gaatgccatc atcatcggct
      901 tcaacgtgcg tccaaccccc aaagccaatg aattggccga gcgcgaaggg gtcgacctcc
      961 gcctttatac catcatctac gacctgatcg ccgatgtcaa agcggccctg gaagggcttt
     1021 tggaaccgga agtggcggag catattatgg gccgcgcaga ggtgcgcgag accttccata
     1081 ttccgcgcgt cggcgtcatc gcgggttgtt atgtgaccga ggggacgatc actcgcaatg
     1141 ccgactgccg gctcctgcgt gataacatcg tggtctatca agggcgtatc ggctcgctac
     1201 gccgcttcaa ggaggatgtc cacgaggtgc acagcggcta cgaatgcggg atcgggctcg
     1261 accgcttctc cgatatcaag cgcggtgata tcgttgagcc ttttgtgcgc gagcgggtgg
     1321 cgaagaagct ggccgcgcaa agttaggcct atgatcgtcg gtgtgtgtac gattgatctc
     1381 cgaattccgg gcatcgatag cctcaaaggt aaacgcagtg tcgtccgcaa gatcaaggag
     1441 cgtgtcaaga acacctttaa cgtgtcgatt gcggaagtgg aagatcttga caagctccag
     1501 cgcgtggggt tagggatcgc gttcgtgagc aatgactcga agcatattca tagtacgctc
     1561 agcaaggtgg tcaattttat tgaccatatg tatgttgcgg acatcatcga ttatcacatt
     1621 gaagtctggt ga
//
LOCUS       DASQSL010000291         1149 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_180467, whole genome shotgun sequence.
ACCESSION   DASQSL010000291 DASQSL010000000
VERSION     DASQSL010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180467"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..164
                     /locus_tag="VE844_02945"
     CDS             <1..164
                     /locus_tag="VE844_02945"
                     /inference="COORDINATES: protein motif:HMM:NF025819.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Mov34/MPN/PAD-1 family protein"
                     /protein_id="HZC00339.1"
                     /translation="SHPDHPACPSETDRAAAWEGWSYMIVSVTPHGVTEIRSWRLADN
                     KFVEEEIQS"
     gene            161..>1149
                     /locus_tag="VE844_02950"
     CDS             161..>1149
                     /locus_tag="VE844_02950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018991480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HZC00340.1"
                     /translation="MTPVKVRIPMPLRTFTGGADEVIVQAETVREALHTLGQAHSGLI
                     ARILTPEGQIRSFVNIYLGEQNVNTLQGLDTKLTAGQVLSIIPAVAGGSDRKAKDLRV
                     ADLRGRIIQVTPAEALELQRRGAALIDVREQDEITQGSPQGAYRLGRGFLELRIEEVA
                     PDLKQPVLVMCNSGTRSLFAAEDLQRLGYSAVRSVSGGFGRWQSEGLPVEIPQALNRE
                     ARERYARHVLMPEIGEAGQLKLLNARVLLIGAGGLGSPAAFYLAAAGVGIMGIVDHDV
                     VDRSNLQRQILHTDGRVGTSKVESARASLLALNPSITIKAYETRLTSSNVEAL"
BASE COUNT          240 a          297 c          379 g          233 t
ORIGIN      
        1 attcacatcc cgatcatccg gcatgccctt cggagactga tcgcgccgcg gcctgggaag
       61 ggtggtccta tatgatagtg tcagtaacac cgcacggtgt caccgagatc cgctcgtggc
      121 ggctcgcaga caataaattt gtggaggagg aaatccaatc atgacccctg ttaaagtgcg
      181 tattcccatg cccttgcgga ccttcacagg cggtgcggat gaggtgatcg tgcaggctga
      241 gaccgtgagg gaggcgcttc ataccttggg tcaagcccat agtggattga tcgcgaggat
      301 cctgacgcct gagggtcaga tccggagctt cgtgaacatt taccttgggg aacagaatgt
      361 gaacacgctg caaggcttag acaccaagct taccgcgggc caagtgctgt ccattattcc
      421 cgcggtggcc ggaggaagcg ataggaaggc aaaggatctg cgtgtggcgg atctccgggg
      481 ccggatcatt caggtgactc cggcggaggc cttggaactg caacgccggg gagccgcttt
      541 gatcgatgtg cgtgagcagg atgaaatcac gcagggcagt ccacagggcg cctatcgtct
      601 cgggcgtggc tttttggagc ttaggatcga agaggtagcg ccggatctca agcaaccggt
      661 gctggtgatg tgcaacagtg gaacccgctc gctgtttgcg gctgaagatc tccaacgcct
      721 gggttacagc gctgtccgat cagtcagcgg ggggtttggg cgctggcaaa gcgagggact
      781 gccggtagag atcccgcaag ccctaaaccg ggaggcgcgc gaacgatacg ccaggcatgt
      841 attgatgcct gagatcggcg aggcgggaca gcttaagctg ttgaacgcta gggtattgct
      901 gatcggcgcc ggagggctgg gctcaccggc ggctttctac cttgccgcag cgggtgtggg
      961 gatcatgggg attgtggatc acgatgtcgt ggatcgcagc aatctgcaaa ggcagatcct
     1021 gcataccgat ggccgggtgg gtacctccaa ggtcgaatcg gcgcgtgcga gcctgctggc
     1081 attaaacccc tccattacca tcaaggctta tgaaacccgg ctcactagca gtaacgtcga
     1141 agctttgtt
//
LOCUS       DASQSL010000292         1383 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_2454, whole genome shotgun sequence.
ACCESSION   DASQSL010000292 DASQSL010000000
VERSION     DASQSL010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1383
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2454"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..784)
                     /locus_tag="VE844_02955"
     CDS             complement(<1..784)
                     /locus_tag="VE844_02955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00341.1"
                     /translation="MNDLVSLAWPLSRLGEAIETLARRAGLRPTAVGAATSPRFHGEP
                     EQEDLDSWLDWACARLGIEVESVEATGAEFVELLRGAGPALLRYRHAGEHYVLLLLKA
                     TARAVQLISPDLRIRKCPLGVVRAALCAEVEGPVIAEVEALLRQANIPARNWSGVKHV
                     LVQERIAARRFGGCWMLRTPPTGSFWAQVSYTRLPGRLVTMLAVFAGLYLLEIVGWIL
                     IGRGALDGRLNPGWLVAWALLLLGTVPLRLWGGWLQGALGIGL"
     gene            complement(777..>1383)
                     /locus_tag="VE844_02960"
     CDS             complement(777..>1383)
                     /locus_tag="VE844_02960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZC00342.1"
                     /translation="VTNIHWGLHSLHDYRSDPLQTSSCESALAKVLVRLPEGLQSSLG
                     EGGARLSGGEGQRVRLARAMWQQGVRLALLDEPFRGLDREQRHRHLTQARRFWQEATL
                     ICVTHDVGETRSFGRVVVVEGGHIVEDGRPEELAAAPSSRYRALLDMEESLRQGVWSA
                     FLWRRIRLDGGRVQEATTKSATRPKRNIAAKVVIGGITSHE"
BASE COUNT          285 a          472 c          368 g          258 t
ORIGIN      
        1 ctaagccgat gccgagcgcg ccttggagcc agccgcccca gagccgcaaa ggaaccgtac
       61 cgagcaacag cagtgcccac gcgactagcc aaccgggatt gagccgacca tccagcgccc
      121 cccgcccgat caagatccaa cccacaatct ccagaaggta caggccggcg aataccgcga
      181 gcatggtgac taagcggccg ggtaaccgtg tgtaggaaac ctgggcccaa aagctacccg
      241 tcggtggcgt tctcaacatc cagcagccgc caaagcgccg tgcagcgata cgctcttgca
      301 ccagcacgtg tttcactccg gaccaattgc gtgcggggat gttcgcctgc ctcagcaacg
      361 cttccacttc ggcaataacg ggcccctcta cctcagcaca cagtgcggcc cgcacgacac
      421 caagcggaca ttttcttatc cgcaggtcag ggctgatcaa ctggaccgcg cgtgcagtcg
      481 ctttgagcag cagcaggaca tagtgttcac ccgcgtgccg ataccgtagt agtgccggtc
      541 ccgcgccgcg aagtagctcc acgaactccg ccccagtcgc ttccacggat tccacttcga
      601 tgcccaatct tgcgcaggcc caatcgagcc agctatcgag gtcttcctgt tcgggctcac
      661 cgtgaaaccg gggtgacgtc gctgcaccga ctgccgtcgg tcttaggcca gcgcgtcgag
      721 cgagcgtttc gatcgcttct cctagtcggg acaggggcca cgccaacgac accaggtcat
      781 tcatggctgg tgatcccgcc gatgaccact ttcgcagcta tgttccgttt aggtctggta
      841 gcgctcttcg tggttgcttc ctgcacccgc ccaccgtcaa gccgaatgcg acgccaaaga
      901 aaggcactcc aaaccccttg gcgtaaagac tcttccatgt ccagtagggc ccgataccga
      961 gagcttggag cagctgccag ttcttcgggc cgtccgtcct caacgatgtg tccaccctca
     1021 acgacgacca cccggccaaa agatcgcgtc tcccctacgt cgtgggtcac gcagatcaag
     1081 gttgcctctt gccaaaagcg ccgggcttgg gtgagatggc ggtgccgttg ctcgcgatcc
     1141 aatcctcgaa atggttcatc caacagcgca agacggaccc cttgctgcca catggctcgc
     1201 gccaagcgta cccgctgtcc ttcacctcct gacagacggg caccgccctc gcccaacgaa
     1261 ctctgtagcc cttcaggcaa gcgcaccaat accttggcta gtgcagattc gcaggagctt
     1321 gtttgcaatg gatcactcct gtaatcatgg aggctatgaa gcccccaatg tatgttggtc
     1381 act
//
LOCUS       DASQSL010000293         2211 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_57245, whole genome shotgun sequence.
ACCESSION   DASQSL010000293 DASQSL010000000
VERSION     DASQSL010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2211
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57245"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..500
                     /locus_tag="VE844_02965"
     CDS             <1..500
                     /locus_tag="VE844_02965"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HZC00343.1"
                     /translation="PKIRIEILVPDFRKRMDRALALLSEAPPDVFNHNLETIPKLYRQ
                     VRPGADYTGSLVLIKRFKQQHPMIPTKSGLMLGLGESLKEVKEVLHDLRTHECDMITI
                     GQYLQPSRYHLPVTRFVPPEEFQQLADYGKALGFKNIASGPMVRSSYHADLQARGEGV
                     GLPDD"
     gene            635..1816
                     /locus_tag="VE844_02970"
     CDS             635..1816
                     /locus_tag="VE844_02970"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00344.1"
                     /translation="MNETINTTQPQLSKLAAFRQAIYTCFLKAGDVLFEIVDALLLSP
                     RLASFPELSCVPVFRRQWPSLYEGWEDGKVDETKLLETLTEQLPESERPLLVGDHTAW
                     PRLRARTLEERAFQHQPTPLQGQKPITLGHGYSTLGVVPGAAKTDPQKADPKRSTGSW
                     FLPVLHERIESATTPSQKAAEQLQQVCPKLEQRPLALYDSEYGSGTFLNETEGIPCDL
                     LFRVRSNRTLRRSPPPYKGRGARPKHGPRFRLGDPMTWGKADEEWEFNDPKLGRVCLQ
                     RWNNLHFEKTPKRLITLVRIERLEARGTRRDPRVVWLGYCGEELPSHSLEWRQYLNRF
                     VIEHWYRFIKQGLNWTLPRLGTPQQSELWSLLVIIAYGQLWLAHGVVADCPRPRGTPL
                     S"
BASE COUNT          472 a          643 c          642 g          454 t
ORIGIN      
        1 tgcccaagat ccggattgag atcctggtac ccgattttcg caagcgtatg gatcgcgcac
       61 ttgcgcttct gagtgaggcg ccccctgatg tattcaacca taatctcgag accatcccca
      121 agctctaccg tcaggtgcgc ccgggtgcgg actataccgg ctcgctggtg ctgatcaagc
      181 gcttcaagca gcaacaccca atgattccga ctaaatcagg cttgatgctc gggctcggtg
      241 aatccctcaa ggaggtcaaa gaggttcttc acgatctgcg cacgcatgaa tgtgacatga
      301 tcacgattgg ccaatacctg caaccgagcc ggtatcatct gccggtcaca cggtttgtgc
      361 cgcctgagga attccagcaa ctcgctgact atggcaaggc gctgggtttc aagaatatag
      421 cgagtgggcc gatggtgcgg tcctcctatc atgcggatct gcaggcgcgg ggggaagggg
      481 ttggtttacc tgatgactga gggggtgata cgtgggtaac agcaaatcag ccaaaacgag
      541 attttgattc gagtttagac tatttgaact ttgatgaatg aaaacggcgg cttgaggctt
      601 gcccaaaccg ccgttgggca gtgtaattgt ggatatgaac gagacaatca acactaccca
      661 accgcagctt agcaagcttg ctgctttccg ccaagctatc tacacctgct ttctcaaagc
      721 gggcgatgtg ctttttgaaa tagtcgatgc cttgttgctc tcgccgagac tggcatcatt
      781 tcctgaactc tcatgcgtgc cggtttttcg gcgtcagtgg ccgagtctct acgaaggctg
      841 ggaggacggg aaggtcgacg aaacgaagct gctcgagacc ttgaccgagc agttgcccga
      901 gagtgagcgt ccgctgctgg tcggagacca cacggcatgg ccgcgcctgc gagcgcgcac
      961 gcttgaggag cgcgcttttc agcatcaacc gacgccgctc cagggacaaa agccgatcac
     1021 tctgggtcac ggctacagca cgttaggagt ggtgcctggg gcggcgaaaa ccgaccccca
     1081 gaaggcggac ccaaagagga gcacgggcag ttggtttctg cccgtgctgc acgaacgcat
     1141 cgagagcgct acgacgcctt cccaaaaggc tgccgagcaa ctgcagcagg tctgcccgaa
     1201 acttgagcag cgtccattag cactctacga cagcgagtat ggcagcggta catttctcaa
     1261 tgagaccgag ggtatcccgt gcgatttgct cttccgcgtg cgttccaatc gcacgctccg
     1321 gcgttccccg ccgccctaca agggacgggg cgcacgacct aaacacggcc cccgctttcg
     1381 acttggcgac ccgatgacct ggggcaaggc cgatgaagaa tgggagttca atgatcccaa
     1441 actcggtcgc gtgtgccttc aacgctggaa caatttgcat ttcgagaaga cgcccaagcg
     1501 cctcattacg ctggttcgga tcgagcgctt ggaagcgcgc ggcacacgcc gcgacccgcg
     1561 cgtggtctgg ctcggttact gcggcgaaga gttgccgagc cactccctgg agtggcgcca
     1621 gtacctgaac cgtttcgtga tcgagcattg gtatcgcttc atcaagcagg gattgaactg
     1681 gacgttgccg cgcctgggga cgccccagca gagtgagcta tggagcctgc tggtgatcat
     1741 cgcctacggg caattgtggc tggcgcacgg cgtggtcgcc gattgcccac gtccccgtgg
     1801 cacccctctc agctgaaact gaccccgggg cgggtgcatc aggctatggg gggaattttc
     1861 gcgacgagtg ctatacaccc gccagggggc caaaacctcg cggaaattct ccaggctggc
     1921 cgccagggcg cgttcgcacc aaacgcacac gttaccccgt ggtcaaaaag cacaccaaag
     1981 cagctactaa gaccgccaaa caggcttcta cgacctaaac ttcgtcgcct tgagacctca
     2041 aggcgggcca gtctctttcc tcggtgtcac ccgccgggag ttgggtagtc taaactcgaa
     2101 cagtaatatc tattctattc tctcaccgag gttacacgcc atgggtttaa gcctagttcc
     2161 gcgctcgcct cacgggggcc ccaggttggt tttccgcaga tagtattcga c
//
LOCUS       DASQSL010000294         3179 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_70959, whole genome shotgun sequence.
ACCESSION   DASQSL010000294 DASQSL010000000
VERSION     DASQSL010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3179
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70959"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..690
                     /locus_tag="VE844_02975"
     CDS             <1..690
                     /locus_tag="VE844_02975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00345.1"
                     /translation="QVRHPVPVSSAFDVDGRVQDLLSMLRTDLDSFTEVEASSLMLDG
                     YLVAGAVLPQATDIAALIPAKVQVDEERWRFQRIGPWLANPSEQYLEQLGVAKQVFFK
                     VFYLIQPKWLGFVSRIALVLGVLALLVLIITLLWDVRPSLGALVGIGVLIALFYVSRR
                     KLEQNIPIVRLLQAPIDAVKRFVGRALPSVLLTPILQFHLKFIDPIFLKLGEIDRLET
                     GRSTEKGRSGS"
     gene            701..1906
                     /gene="glcF"
                     /locus_tag="VE844_02980"
     CDS             701..1906
                     /gene="glcF"
                     /locus_tag="VE844_02980"
                     /EC_number="1.1.99.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011280916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycolate oxidase subunit GlcF"
                     /protein_id="HZC00346.1"
                     /translation="MQTALADFIKHTPDGQEADRILRSCVHCGFCTATCPTYQLLGDE
                     RDGPRGRIYLIKGLLEGQAVGRATQIHLDRCLTCLACETTCPSGVQYGHLVDIGRQQL
                     EQRVQRPIAERLSRFALGKLIPYPQRFRTLLRMGQLLRPFLPKPLRRFIPKRSRAAPW
                     PHQAHKRQMLLLEGCVQPALAPAINTAAARILDRWGITAIRAEGCCGAISYHLSAVEE
                     ALVFVRANIDRWWPFVEKGAEAIVSTASGCGTLIKDYGYLLRHDPHYAEKARRISALT
                     RDISQVVDREDLSTLIPPAPRVPRIAFQAPCSLQHGQKLGGITESLLQRLGFELTPVA
                     DGHLCCGSAGAYSLLQRSLARPLLQNKIKNLEAGQPDLIATANIGCYSFLQQAASVPV
                     KHWIELLDP"
     gene            complement(1965..2423)
                     /locus_tag="VE844_02985"
     CDS             complement(1965..2423)
                     /locus_tag="VE844_02985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017773721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RT0821/Lpp0805 family surface protein"
                     /protein_id="HZC00347.1"
                     /translation="MKIRKASGIVAILAFLMGCTGNYATKENVGTLTGAALGGYVGSQ
                     IGGGKGQLAATAAGAIAGALLGGTVGKSMDEVDRVKANQALESSRTGYTTSWSNPDTD
                     DTYSITPTRTYETASGPCRDFTTQAVIDGKRETLYGTACRQADGTWRTSR"
     gene            complement(2519..>3179)
                     /locus_tag="VE844_02990"
     CDS             complement(2519..>3179)
                     /locus_tag="VE844_02990"
                     /inference="COORDINATES: protein motif:HMM:NF016236.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HZC00348.1"
                     /translation="PIYSFNDEIDKYILMPVAETYAEYIPQRVRNAVTKFFDNLSYLD
                     TILNDFLQGKLKAGLEDSGRFIVNSTAGIGGLFDPATALGIPKREEDFGQTLGVWGAG
                     EGAYVVLPFLGPNSVRDAPGVGVSTLLNPLFYVSSVVTIPVGALGAVNERANFLEATR
                     LRDEAALDPYVFTREAYRQKRLSEIYDGEIPPEELEEDVMDVDEESGEPDEEIEAGED
                     N"
BASE COUNT          665 a          946 c          833 g          735 t
ORIGIN      
        1 caagtcaggc atccggtgcc ggtatcctca gcatttgacg tcgatgggcg ggtgcaagac
       61 ctgttatcta tgctccgcac cgatctcgat tcttttaccg aggtcgaggc ctcttcactg
      121 atgctggatg gctatctcgt cgccggcgca gttttgccgc aggcgacgga tatcgccgcg
      181 ctcatccccg ccaaggtgca ggtcgacgag gaacggtggc ggttccagag gatcgggccg
      241 tggctggcaa acccttccga gcagtatctg gagcagttgg gcgtggccaa gcaggtgttc
      301 tttaaagtgt tttatttgat acaacccaaa tggctcggtt tcgtgtcgcg catcgcactc
      361 gtcctcggcg ttctcgcgct cctcgtgctt atcatcacct tgctctggga tgtcaggcct
      421 tcgctcggcg cgcttgtggg gatcggtgtc ctgatcgccc tattttatgt cagccggagg
      481 aagctcgagc aaaacatccc tatcgtccgc ctgctacagg cgcctatcga tgctgtgaaa
      541 cgctttgttg ggcgggcgct cccctcggtg cttctcaccc cgatcttgca attccatctc
      601 aagttcatcg acccgatctt cctcaaattg ggcgagatag atcgccttga gactgggcgg
      661 agcacggaga aaggccgatc tggctcgtaa agaacggccg atgcaaacag cactcgcaga
      721 ctttatcaag cataccccgg acgggcagga ggccgaccgt atcctgcgca gctgtgtgca
      781 ctgcggcttt tgtaccgcaa cctgcccgac ctaccagcta ctcggcgatg agcgtgacgg
      841 tccgcgggga cgtatctatc tgatcaaggg tttattggaa ggacaggccg tgggccgggc
      901 gactcagatc cacctggatc gctgtttgac ttgtctggcc tgcgagacca cctgtccctc
      961 gggggtgcaa tacggccatc ttgtagatat tggccggcag cagctagaac aacgggttca
     1021 gcgacctatc gcagagcgct tatcgcgctt tgccttgggt aagcttatcc cctacccgca
     1081 acgattcagg acgctgttac ggatgggcca actcctccgt ccctttctac ccaagccgct
     1141 gcgccgcttt atacccaagc gatcgagggc tgccccctgg ccccatcaag cgcacaaacg
     1201 ccaaatgctg ctcttggaag gctgtgtcca gccggccctg gcaccggcga tcaatacggc
     1261 cgcggcacgc attctggatc gatgggggat caccgcgatc cgggccgagg ggtgctgcgg
     1321 ggcaataagc taccatctct ccgcggtcga ggaggcactg gtcttcgtgc gtgccaatat
     1381 cgatcggtgg tggccttttg ttgagaaggg cgcagaggcc atcgtcagta cggcaagcgg
     1441 ctgcgggacg ctgatcaaag attatggcta tctgttacgg cacgatcccc attatgctga
     1501 aaaggcccgt cggatctcgg cactcactcg agatatctca caggtagtag atagagaaga
     1561 cctttccacc cttattcccc ccgctccacg agtacctcgg atcgcgtttc aggccccgtg
     1621 cagcctgcag catggccaga agctcggcgg cataacagag tccctgcttc aaaggctggg
     1681 atttgaactg actcctgttg cggacggcca tctctgctgt ggctctgctg gtgcttattc
     1741 cctgctgcag cgatcgctcg cccggccgtt actgcagaat aagatcaaaa acctggaggc
     1801 gggacagcct gatctcatcg cgaccgccaa tatcggctgc tacagtttcc tgcaacaggc
     1861 agcctctgtg ccggtcaagc actggatcga attactcgat ccataggctg cgcgcacgga
     1921 ccccccttac taaaacccag gcatccccac caccgccctg gttttcaacg tgaggtccgc
     1981 caggtgccat ctgcctgacg gcaggcggtt ccatagaggg tttcccgttt accatcgata
     2041 accgcctggg tggtgaaatc acggcatgga ccgctcgccg tctcataggt gcgtgttggc
     2101 gttatcgaat aggtatcatc tgtatcaggg ttgctccaac tcgtggtata gcctgttcgg
     2161 gaggactcca aggcttgatt ggccttcact cgatcgactt catccatgct ttttccaact
     2221 gttccaccca gcaatgcccc ggcgatagca ccggcggctg tggcagccaa ttgtccttta
     2281 cctccaccga tctggcttcc tacataacct ccaagagcag cacctgtcaa ggttcctaca
     2341 ttctctttag tagcatagtt acccgtgcaa cccatgagaa aagccaagat tgcaactata
     2401 cctgaggctt ttctgatctt catactgtcg atcctccaaa aacgttaaag atacataagc
     2461 caataagatg tacgtaggga tttataagtt catttttaat cataagattc aattagattc
     2521 aattatcctc cccggcttca atctcttcat ccggttcccc actctcttca tccacatcca
     2581 taacatcctc ctccagttcc tcaggcggta tttcaccgtc ataaatttca ctgaggcgtt
     2641 tttgccgata agcctcccgg gtaaagacat aaggatccag ggccgcttca tctcggagtc
     2701 gagtagcctc aaggaaattg gcacgttcgt taaccgctcc gagcgccccg accgggatag
     2761 tgactacgct agagacatag aacaatggat tgagcagggt gctcacaccc acacccggcg
     2821 catcccggac agaatttggc cccagaaacg gcaagaccac ataggcgccc tctccggccc
     2881 cccaaacgcc cagggtctgt ccgaagtctt cctcacgttt cgggatcccg agcgcagtgg
     2941 cgggatcaaa gagcccgccg atcccagcgg tgctattgac aataaagcgc cctgaatcct
     3001 ccaaccctgc cttaagcttg ccctgcagga aatcatttaa gatggtgtcc aggtatgaca
     3061 ggttatcgaa gaatttagta accgcattgc ggacacgctg cgggatatat tcagcatagg
     3121 tctcggctac gggcataagg atatatttat ctatctcgtc gttaaagctg tatatgggc
//
LOCUS       DASQSL010000295         1266 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_180481, whole genome shotgun sequence.
ACCESSION   DASQSL010000295 DASQSL010000000
VERSION     DASQSL010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1266
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180481"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            228..911
                     /locus_tag="VE844_02995"
     CDS             228..911
                     /locus_tag="VE844_02995"
                     /inference="COORDINATES: protein motif:HMM:NF021371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2071 domain-containing protein"
                     /protein_id="HZC00349.1"
                     /translation="MYQFWGKLLFLHWPVPAELLRPLIPDRLIIDTFDGAAWVGITPF
                     TMWGVRPVFAPSLPFLSESHEINVRTYVHLDGVPGIWFFSLDANNPIAVWGARLAFHL
                     PYFNARMSLEQRDQTIYFTSRRTHRDAAPAEFEAAWTVGDQLPQSEPGSLQFFLTERY
                     VLYSARGDALYRARIFHQPWPLREASLLSYRSTMLESQGLPSPNEDPLLHQQGESLRV
                     RIWPVARVR"
     gene            complement(918..1121)
                     /locus_tag="VE844_03000"
     CDS             complement(918..1121)
                     /locus_tag="VE844_03000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00350.1"
                     /translation="MNLRVIPTSVHGVLDYVTGSALLATPELFRLKDVSPLRYWLPHT
                     LVGDPASKRIVRQTIGVLITFKP"
BASE COUNT          253 a          359 c          365 g          289 t
ORIGIN      
        1 cacaaggacg tctacatgcc gttggtggat gagaagggca agaccatccg tcccgactca
       61 gaggaggcca agccagcacc catcaacccc tagaccggag ccctgctctt tttcagcaaa
      121 gctggggttt agggtcggta aagagagaat cgtagactat gaaaagagag ccggtcgata
      181 acgttgatcg cctatcggtt cgagcacgcc cagcaggttg gccgattatg taccagttct
      241 ggggcaagct gctattcctg cactggcccg taccggcaga gttgcttcgt ccgctaatcc
      301 cggaccgctt gatcatcgac accttcgacg gcgctgcatg ggtcggtatc acgcctttca
      361 ccatgtgggg cgtaaggccg gtgtttgcgc cgtcgctgcc cttcttgagc gaatctcatg
      421 agataaacgt gcgaacgtac gtccacctcg acggggtccc gggaatatgg ttcttctctt
      481 tagacgccaa caacccgatc gccgtttggg gggcaaggct tgcctttcat ctgccatact
      541 tcaacgctcg catgagcctc gagcaacgag atcagactat ttactttact tcgaggcgca
      601 cccaccgcga tgctgcgccc gccgagttcg aagccgcttg gacggtcggc gatcagctgc
      661 cgcagtccga gccgggttcg ctgcagttct tcctgaccga gcgatacgtt ctctattccg
      721 ctcgcggaga cgccctctac cgcgctcgga tcttccatca gccttggccc ttgcgtgaag
      781 cgagcctgtt gtcgtatcgc tcgacgatgc tcgaatcgca ggggttgcct tcgccgaatg
      841 aggatccgtt actgcaccag cagggagaat ctttgagggt aagaatctgg cctgtagcca
      901 gggttagata gcatcatcta cggcttgaac gtgatcaaga cgcctatggt ttggcgaacg
      961 atcctcttcg aggcagggtc gcccacaagc gtatgaggca accagtaacg caggggcgat
     1021 acatccttca acctgaacaa ctccggggtt gctagcaggg cgctgcccgt aacgtagtcg
     1081 agaaccccgt gcacgctggt gggtataact cgtaggttca tctcgcttct ccggttcgtt
     1141 ggccgagcgt atgctggttg tgccctgcga cttggtatca aaacaaaagg ccggcgcctt
     1201 ccgaagtgaa gctagcgctg gtgcaggtga tggttgcgct attgttttgt ttttctcaga
     1261 gagtgg
//
LOCUS       DASQSL010000296         1109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_126004, whole genome shotgun sequence.
ACCESSION   DASQSL010000296 DASQSL010000000
VERSION     DASQSL010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126004"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(726..1013)
                     /locus_tag="VE844_03005"
     CDS             complement(726..1013)
                     /locus_tag="VE844_03005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00351.1"
                     /translation="MALDTMTQRCARLLWEGYRAAGEKAVVQLDGGVADDAEMPAGTP
                     VHHACTHQLEYAIGAVVEEPVREGMVGFTPYRITDRGFALLREAGYLPEDS"
BASE COUNT          243 a          328 c          318 g          220 t
ORIGIN      
        1 cggcaagcag cggaggagcg cagacaggca ggagagcaac gccgactaga caagatagaa
       61 gaccagcgcg ggcgggtaga agagcaacgt cggcgagcac gtggacaaag gtgattacaa
      121 cgagctccgg ttagcagtaa gagctggggg taagctcttc agttcatagg ctgcggagct
      181 ggaagccaaa ggggagacag caagagcata cgcgagcagg cgcagcgagc acgggaagcc
      241 gtgcgcaagt ccgtcgaggt cgaagcgagg atcgagcgga ggatacaagg cgccaccgct
      301 acgttgactt aatctattag ccttactatc acgacgacca gcacgagtat gatcagggca
      361 gccaccagaa cccttccgaa ctggaaagcc ccacgggatt gaggggtcct tcggcctcca
      421 acatctctgc gcctggatct gcctcgcata attcgccctt tccctttttg tgttcctatt
      481 actaacacgt attgtacggg acaaggaata gcagaataca accccgccct actgtcgcag
      541 atgatcgcag aagtcagcga ggctaccatc cactagcgag cctgttgaaa aaccccttca
      601 tgccctgttt cgacccctgt ttttgggcat cgagagtcgt cgtttggagg attttgcggc
      661 tggtgtgggt tcaacgatcg ccttccagac atctcgtgaa cagaggcaac cacctccgga
      721 ggccgttagg aatcctcagg gagatagccc gcctcgcgca gcagcgcgaa accacggtcg
      781 gtaatcctgt agggcgtgaa gcctaccatc ccctcccgca cgggctcctc tactaccgct
      841 cctatcgcgt attctagctg gtgcgtgcac gcgtgatgta cgggcgttcc ggccggcatt
      901 tcggcgtcat ctgcaacgcc accgtccagt tggacgactg ccttttcgcc tgccgccctg
      961 tacccttccc ataggagccg cgcacagcgc tgtgtcatcg tatcgagtgc catatcctgc
     1021 atcctctgct ggtctgccta cggcgagtag cttagcgtac tacccgtgga gggccaccct
     1081 ggcccttttc ttcggcgaag ttcggttaa
//
LOCUS       DASQSL010000297         1096 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_83744, whole genome shotgun sequence.
ACCESSION   DASQSL010000297 DASQSL010000000
VERSION     DASQSL010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83744"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(364..882)
                     /locus_tag="VE844_03010"
     CDS             complement(364..882)
                     /locus_tag="VE844_03010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00352.1"
                     /translation="MARGKHDWTTLDPRIDSLKGQGWTDTQIAKELNIGRQTLVDHLR
                     SRELVHLGTPKTTEVIEVPQETPGHPGTLEGYQEVIEEIQQSVPEVAHLVTDEGHPSV
                     PEVHPEAFGGTLAGIPGHTQEKTYVFDVRHIALIERYAQDHRLALKDVIYAMCQEFFE
                     HRGYVEERRQQP"
BASE COUNT          211 a          306 c          334 g          245 t
ORIGIN      
        1 gatcagcagt tgggccgcac gagagcgcgg gattgacccg ggagcacagg aagggcggga
       61 cgttccaacg ttggggagag actcgcgttc ctcttttgca ccgtcacgct ccttgtctgt
      121 tgcggggccc gacaccacgg ggggcgacga gacagtcacg gcggctcggg attgtacgag
      181 acgggagatc atgtgtcaac gagaattccg acagcagcgg ggcaggatga tgccgcggag
      241 attgaccgct gcgacttacc caacagagtc aggacctcct ttacctcagt ggggaattcc
      301 gccgactcgc gaatgcccac tgtctaacgt gcgcggtggt agatcacatc ttgagtctgt
      361 gatttacggt tgctggcgtc gttcctcgac gtagccacgg tgctcaaaaa actcctggca
      421 catggcgtaa atgacatcct taagcgcaag gcggtggtct tgagcgtacc gctcgatcag
      481 ggcaatatgc cgcacgtcga agacataggt tttctcctgg gtgtgcccag gtataccggc
      541 cagtgtcccc ccgaaggctt ctgggtgtac ttcaggaaca ctggggtgtc cttcgtcggt
      601 gacgagatgg gctacctccg ggacactttg ctgtatctcc tcgatcacct cttggtaccc
      661 ttcaagtgta cctgggtgtc ccggagtctc ctggggtacc tctatgactt cggtggtttt
      721 tggtgttcct aggtgtacca attcacgcga gcggagatgg tcaactaggg tttggcggcc
      781 gatgttcagc tctttagcaa tctgggtatc ggtccagcct tggcccttca ggctgtcgat
      841 gcgcgggtca agcgtcgtcc agtcatgctt gcctcttgcc ataaacgccc ctccaatcta
      901 acggagtagt cgccggtgat attcccctca cgataagtgc ggcaacgcct catcgatcag
      961 cgcacgtaag cgccggagct catcagccag cggcgcctgc aggtgcgtcg ctcgggcgcg
     1021 caagtgccgg agtgaggaca ccaccatcga gagatccgca aatgtttgtg tgaggtcgat
     1081 caggatatca tccaat
//
LOCUS       DASQSL010000298         1830 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_83746, whole genome shotgun sequence.
ACCESSION   DASQSL010000298 DASQSL010000000
VERSION     DASQSL010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1830)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1830)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1830
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83746"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(235..1536)
                     /locus_tag="VE844_03015"
     CDS             complement(235..1536)
                     /locus_tag="VE844_03015"
                     /inference="COORDINATES: protein motif:HMM:NF033540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS701 family transposase"
                     /protein_id="HZC00353.1"
                     /translation="MLPASRTEGEVFAIPQLALAPADVEGFLAELRGFHDAFRDCFAR
                     REPREQFFGYMVGQFSALERKSIEPMALQVAGGNVRAMQRLISDAVWDDVQMRRTYHS
                     LLNDDLGEAEGVLIFDESGFPKKGRESVGVARQYCGTLGKVENCQVGVFAAYASRHGY
                     AFVDQRLFLPEPWFTDAYAARRTKCQVPDELTFHTKPQLAVEILRDLHQEAVLPFKYI
                     VADCLYGNSPDFLEAAEQCGGKIYFVSIPSDTRCGVQGPVTQAKRYTSKGATRAKHAG
                     RHTAKAPLTVAVLAKSIHDCFWYRRHVSEGTKGPIEYEFTKRQVMLSKDNLPCRAVWL
                     VMKRTIGEKPTYSYYISNAPISTRLRVFVWLSGMRWAIEQCFEETKMELGMDHYEIRK
                     YPGWHHHMLTCMLAHFFLWHMKIRLGKKSTSAYGVAAEDVA"
BASE COUNT          392 a          565 c          475 g          398 t
ORIGIN      
        1 aaacgataat ggacccccgt ttgaagcgcc caaaccaatg acgctggcga caatgattgc
       61 gctcaatccc gtccgtccgg gttttgctca taaccctaca acgtcatttg acatagttgc
      121 ctggggtgac gccgtttgcg gtgcgacagg aaagcccggt ggtttctctg ctgtaccgtt
      181 gcgaccaacc agagcgcctc agcaatcgtg tacgtttttc gggggaggac ccgctcaagc
      241 aacatcctca gctgcgacac cgtaagcgct ggtgcttttt ttccccaagc ggattttcat
      301 gtgccagaga aagaaatggg ccaacatgca ggtgagcatg tgatgatgcc atcctgggta
      361 ttttctgatt tcgtagtggt ccatgcccag ttccatcttg gtttcctcga agcattgttc
      421 aatcgcccag cgcatgccac ttaaccagac aaatacccgc aagcgggtac tgattggcgc
      481 attactgata tagtacgaat acgtcggctt ctcaccgatg gtgcgtttca tcaccagcca
      541 taccgctctg caggggaggt tatctttaga caacatcacc tgcctcttgg taaactcata
      601 ctcgattggc cctttggtcc cttcagagac gtgcctccga taccagaaac aatcatggat
      661 gctcttggcc aggacggcaa ccgtgagagg cgcctttgcc gtgtgtcgtc ccgcgtgttt
      721 cgctcgcgtt gctcccttag acgtgtatcg cttggcttgg gtcacgggtc cctgtacccc
      781 acagcgggta tcggagggaa tcgacacaaa atagatcttt ccaccgcatt gctccgccgc
      841 ctcaagaaag tcaggactat tcccatagag acaatcggcc acaatgtact tgaaaggcag
      901 cacggcctcc tggtgaaggt cccgcaagat ctcaacggcc aactggggct tggtgtgaaa
      961 ggtcagctcg tccggcacct ggcacttggt ccgcctggcc gcataggcgt ccgtaaacca
     1021 cggctcaggc aggaataacc gctggtccac gaacgcatac ccatgccggg acgcgtaggc
     1081 cgcaaacacc cccacttgac agttctccac cttgcccaag gtgccacagt actgccgcgc
     1141 cacgcccacc gactcccggc cctttttggg aaagcccgac tcatcaaaaa tcaacacccc
     1201 ctcggcctct cccaaatcgt cattcagcaa gctgtggtac gtgcgacgca tctgcacgtc
     1261 atcccagacc gcgtcgctga tcaggcgctg catcgcacgg acgttccccc cggccacctg
     1321 gagcgccatc ggctcgatcg atttccgctc gagggcactg aactgcccca ccatgtagcc
     1381 aaagaactgc tccctcggct cgcgccgcgc aaaacaatcg cggaaggcgt catgaaaacc
     1441 ccgcaattcg gccaggaatc cttcgacatc ggctggcgcc agagccaact gcggaatggc
     1501 aaacacctcg ccttcggtcc gacttgctgg gagcataatc tgcctcctgt gggtgaagtg
     1561 ggaaatccga cagcagatta tgcgtcgacc ttatcggcgt caagcgatat gtcgttgtag
     1621 ggctaagttg ctgacttttc cgtttcgtga tcacggccag gattcatgcg gcctccaggt
     1681 gaaagcttca tgaaagtact tgtcacgtaa aggcttttgg ccacgaggtc caacgcctcc
     1741 aggtcgtgtt gaggggcctg ggacctcctg gaccctggtt tgcctctatc ccagcgatgc
     1801 ccgggcgtac tgacaaacga aaccgtggcc
//
LOCUS       DASQSL010000299         1794 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_153432, whole genome shotgun sequence.
ACCESSION   DASQSL010000299 DASQSL010000000
VERSION     DASQSL010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1794
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153432"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(123..1328)
                     /locus_tag="VE844_03020"
     CDS             complement(123..1328)
                     /locus_tag="VE844_03020"
                     /inference="COORDINATES: protein motif:HMM:NF033591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC00354.1"
                     /translation="MQARQVLHKLLQKVCSEMHKLRRTALFVNVMAALHGEVLTVTPL
                     GRSIRSEAKEKHCIKRADRLLSNHRLQGERLGIYSSLTPQLIGHKQRPVIILEWSDLD
                     ECKRHFLLRASVPVEGRSLTLYEEGHTLRSKEKPKTHRRFLQTLQKRLSPHCRPILVT
                     EAGVRTSWFKQVEELGWDWVGRIRNRHEGQLPGEAQWVPCKSLYPRATSIPKALGRAG
                     VTQSNPITCQLVLYKAKPKGRVHLNRLGQASQSAHSRKHTKAQREPWLLGTSLPEGFK
                     LAQKVVKLYALRMRIEESFRDLKSTRFGLSLELHPTYQLEPLQGLLLIATLALRVAWL
                     MGKATELTGQARHYQANTVKTRVVLSTLFLGLKVIDDSRVTLRLVDVIAATNSLHENL
                     QQHCYDGSN"
BASE COUNT          377 a          476 c          521 g          420 t
ORIGIN      
        1 gggaaggcgt gtcaccaaga gcaaagccgg cagatcgaag gctcagcccg aacaccgtag
       61 ggggcaactc ggcttgctat ggaatcgtgg tctgaccctg tggtatcccc acaaatgttg
      121 gctcaatttg agccatcgta gcagtgttgc tgtaggtttt catggaggct attggtggca
      181 gcgatcacat cgaccaatcg tagcgttacc cgcgagtcat cgatgacttt gagcccgagg
      241 aatagggtgg agaggaccac tcgggttttg accgtattgg cttggtagtg gcgagcttgc
      301 ccggtgagtt cggtggcttt gcccatgagc caagccaccc tcagggcgag ggtggcgatg
      361 agcaagagcc cctgcaaggg ctcgagttga taggtaggat ggagttcgag gctcaggccg
      421 aagcgggtac ttttcagatc ccggaaagac tcctcgattc tcatcctcaa ggcatagagc
      481 ttgaccactt tctgtgcgag cttgaagccc tcggggaggg aggtgcccag taaccaaggc
      541 tcgcgttggg ccttggtgtg tttgcggctg tgagcggact gcgaggcttg gccaaggcga
      601 ttgagatgga cgcggccttt gggtttggcc ttatacagta ccaactgaca ggtgatcgga
      661 ttgctctgcg tcacgcccgc tcggcccaag gccttcggta tggaggtggc tcgagggtac
      721 aagctcttac aagggaccca ctgcgcctcg cccgggagtt gcccctcatg gcgattgcgg
      781 atgcgtccta cccaatccca gcccaactcc tccacttgct tgaaccagga ggtgcgaacc
      841 cccgcctcgg tgaccaagat cggtcgacaa tggggcgata gcctcttctg aagagtctgc
      901 agaaatcgcc ggtgggtctt aggcttttcc ttgctccgga gggtgtgccc ctcttcatat
      961 aaggttagcg aacggccctc caccggcacc gaagccctca agagaaaatg ccgcttacat
     1021 tcatccagat cagaccactc gagaataatc accgggcgtt gcttgtggcc gataagctgc
     1081 ggggtgagcg atgaatagat gcccaagcgc tccccctgca agcggtggtt ggacagtagc
     1141 cggtcggcac gcttgataca gtgtttttct tttgcttcac tcctaattga gcgccccaga
     1201 ggcgtcacgg tgagcacctc cccgtgaagg gccgccatca cattcacaaa gagggccgtg
     1261 cgacgcagct tatgcatctc ggaacagact ttctggagaa gtttatgtaa tacttgtctt
     1321 gcctgcatga tgggagctct ccttaccgct ggtatggtta ccaatcggtg agatcatcaa
     1381 ccatcatgcg ggttccctga cgttagaaat tatttaactg gctgataaaa cagttttatt
     1441 cgtggggata cttcagggac agactggaat ggcacttcct gaaacgggtt agctcattgt
     1501 ttttaaaagg attttctcga aaaggcgtat ttcataaaaa ttctttaaag tcaatttatt
     1561 atctttgttt gaccctcctc taggaagtgc cattccagac agagatctta cgggttggca
     1621 gcgcgagcgt gaggcgatag tcgagagcct aatacaccaa ggcttcgatc cgcgcatcgg
     1681 ggcctttgtc cagtcctttg gctcgaccgc gctcgatgcc tccctcccgc gcttgccgat
     1741 gctcggcgtg attgaggcga ccgacccgag gatgcgctcc accatcgcgc agat
//
LOCUS       DASQSL010000300         1312 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_126011, whole genome shotgun sequence.
ACCESSION   DASQSL010000300 DASQSL010000000
VERSION     DASQSL010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1312)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1312)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1312
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126011"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1017)
                     /gene="lepA"
                     /locus_tag="VE844_03025"
     CDS             complement(<1..1017)
                     /gene="lepA"
                     /locus_tag="VE844_03025"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014950105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HZC00355.1"
                     /translation="MEQEHLRNFSIIAHIDHGKSTLADRFIQICGGLSEREMAEQVLD
                     SMDLERERGITIKAQSVTLNYEARDGKTYELNFIDTPGHVDFSYEVSRSLAACEGALL
                     VVDAAQGVEAQTLANCHTAIDQGLKVIPVLNKIDLPAADPARVAREIEEIIGIDAADA
                     LRISAKSGEGVRELLELLIERIPIPRGDAKASLKALIIDSWFDNYLGVVSLVRVFDGT
                     LYKQTRIRVMSTGRDFQVDKIGIFTPKPTEREHLKAGEVGYVVAGIKDINGAPVGDTL
                     TDARNPADSPLPGFKAVKPNVFAGLFPVDSNDYEAFREALAKLRLNDAALHYEPETSQ
                     ALGFG"
BASE COUNT          297 a          384 c          346 g          285 t
ORIGIN      
        1 cccaaaaccc aatgcctgag aggtttcagg ctcatagtgg agggcggcgt cattgaggcg
       61 caatttggcc aaggcctccc gaaatgcttc atagtcgttt gaatccaccg ggaaaagacc
      121 tgcaaacacg ttcggtttga cggccttaaa gccgggcagc ggggaatcgg ccgggttacg
      181 ggcatcggtc agtgtatccc cgaccggagc gccattgata tccttgatcc cggccaccac
      241 ataacccacc tcgccggcct tcaagtgttc ccgctcagtg ggtttggggg tgaagatccc
      301 gatcttgtcc acctgaaaat ctcggcccgt ggacatcacc cggatccggg tttgtttgta
      361 gagcgtgcca tcaaacaccc gcactaagga gaccacaccg agataattgt caaaccacga
      421 atcgataatc aaggctttta aggaggcttt agcatcccct cgcgggattg ggatacgctc
      481 aattaagagc tcgagaagct ccctcacgcc ttcccctgat ttggcgctga tccgcagggc
      541 atcggctgca tcgatgccga tgatctcctc gatttcgcgt gctacccgcg ctggatccgc
      601 agccggtaga tcgatcttgt tgagcaccgg gatcaccttc aaaccctggt caatagcggt
      661 atggcaattg gcgagcgtct gcgcctccac accctgggct gcatccacta ccaacagcgc
      721 cccttcacag gctgccaaag aacgcgagac ctcatagctg aaatcgacgt gaccgggggt
      781 atcgatgaaa ttgagctcat aggtcttgcc atctcgggcc tcataattga gcgttacact
      841 ttgggccttg atggtaatgc cacgctcgcg ctcgagatcc atcgaatcga gcacctgctc
      901 cgccatctcc cgttcgctta agcccccgca gatctggatg aaccgatcgg ccagcgtaga
      961 tttcccatga tcgatatggg cgatgatgga aaagtttcga agatgttcct gttctattac
     1021 caagcgtgct tttattaaat tgtcttaaga ccagaaacag gcaacagcca cgccattacc
     1081 cactcagaat cacgtcgagt acgatcaatc gtagtggggt gcggagagga gaagcgcgca
     1141 gccggcccca cccttcaccg gctgcgatta taactcatgg tagcagattc cctgccctca
     1201 ttgcgctgga atctttatag ccaagaagat ggggctgccc tggcggtgga tcaacaccgg
     1261 caccgatttg ccggcgggca gcgagctggc cagttccata aagtgcttgc ca
//
LOCUS       DASQSL010000301         1892 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_97461, whole genome shotgun sequence.
ACCESSION   DASQSL010000301 DASQSL010000000
VERSION     DASQSL010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1892
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97461"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(20..1411)
                     /locus_tag="VE844_03030"
     CDS             complement(20..1411)
                     /locus_tag="VE844_03030"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HZC00356.1"
                     /translation="MSTLVSPRNVEPMRGEPPGPKGVPYFGCVGEMRRNPMRFFTKVA
                     QTYGGIARIPLMTGSHVYLVSEPALLHELLVANRDKYMKNVRYRQAQDLVGLGLLLSE
                     GDSWKRQRLSAQPGFNPGYVYNQIGWMAEATERFLEGWEARVDTGKAFDVEPHFFRLA
                     QLLAGEMMLGPHFREIADRFCGHAVAIRQNWPMPPRGILSFLRPPPLIRLARLQKELA
                     GLNALIYAFLDERRRHDFEDSGIIMLLARASAETGEVFDDRELRDQIMTLFFAGHETS
                     ATALCWLHYLLSRYPEVRNRLQREVDEVIGTRRPAAEDIQKLSYTEQVINEALRLYSP
                     IHSISRVATEDNTIGGYHIRKGSTVVVSMYATHRLPRYWLDPERFDPERFALRRQTER
                     PRFSFLPFAVGHRNCIGGSMAMIEIKMIVACIARRYRLDVMTGHPVEPQPGTTMYPRY
                     GMKMTLKRAWAAA"
BASE COUNT          382 a          578 c          551 g          381 t
ORIGIN      
        1 ctcttggctc cctctggagt catgcagcag cccatgcgcg cttgagggtc atcttcattc
       61 cgtagcgcgg gtacatcgtc gtcccgggct gcggttcgac gggatgacca gtcatgacat
      121 ctaggcgata gcggcgcgcg atgcaggcga cgatcatctt gatctcgatc atggccatgc
      181 tcccaccgat gcaattccga tggcctaccg cgaaggggag gaaactaaag cgcggtcgct
      241 cggtctgcct ccggagagca aaccgctcgg ggtcgaaacg ctcgggatcc aaccagtaac
      301 ggggcaggcg gtgagtcgcg tacatcgaca ccacaaccgt cgagcctttt cggatatggt
      361 agccgcctat cgtattgtcc tccgtcgcca cacgtgagat agagtggatg ggcgagtaga
      421 ggcgcagcgc ctcgttgatg acctgctcgg tgtacgacag tttctggatg tcctccgctg
      481 ccggtctgcg cgtgccaatc acctcgtcca cctcccgctg tagcctgttg cgcacctcag
      541 gatagcgcga gagcagatag tgcagccagc acagcgcggt tgcggaggtc tcatgaccgg
      601 caaagaacag cgtcatgatc tgatccctga gctcccgatc atcgaagacc tctcccgtct
      661 cggcgcttgc gcgtgccagc agcatgatga tgccgctgtc ctcgaagtcg tgtctgcgcc
      721 gctcgtcgag gaaggcgtag atgagcgcat tcaggccggc gagctccttc tgcaagcgcg
      781 caagcctgat caaagggggt ggccgcagga agctcagaat gccccgcggc ggcatcggcc
      841 agttctgcct gatcgcgacg gcatgcccac agaaccgatc ggcgatttcc cgaaaatgcg
      901 ggcccagcat catctccccc gcgagaagct gcgccagccg gaagaaatgc ggctccacgt
      961 cgaacgcctt acccgtgtca acgcgggcct cccatccctc aagaaaacgc tcggtggcct
     1021 cggccatcca gccgatctgg ttatagacgt accccggatt gaacccaggc tgggcactca
     1081 accgctgtcg cttccaggaa tccccttcgc tgagcagcag tccgagcccc accaagtcct
     1141 gggcctggcg gtagcgaacg ttcttcatgt acttgtcgcg attggcgacc agcagctcgt
     1201 gcaacagagc cggctcggaa accaagtaga catggcttcc ggtcatcagc ggaatgcggg
     1261 cgatgccgcc ataggtttgc gccactttcg tgaagaagcg catgggattg cgacgcatct
     1321 ccccgacgca accgaaatac ggaacccctt tgggtccggg aggttctccg cgcatcggct
     1381 caacgttgcg gggactcaca agggtactca tgccatttta ctcctagcct cgatttccac
     1441 ggcaccttct tgtgctaaca ttccgcgccc ggccggcggc aatttctcga ggatgtagcc
     1501 ggtctgaggt aggatagcca ttagccactt ttgataccga ttcagtcgtt ctaccaagtg
     1561 ctatccttct gcggcgttta atgctcctca tagcggtttc ttgcgccatc cgggctcttt
     1621 cctgcccctc aggtgaaccg ggcagcgcga cgggcgacaa cgccggtcgt gatggggcag
     1681 aactcagcag acggcctagt agccacatgc ccaccgtaag gggtgggacc aggtgaaggc
     1741 ctgaaccttc gacaaagaga agctgcattt atagatccgt taattgatta acatacattc
     1801 atcgaggcgt atagtgtgtc tggcaattgg aaaaaggatc ggatccgttc gctctgtcgc
     1861 tgtaaggaac gcaatgcgga atacagacgc tg
//
LOCUS       DASQSL010000302         2752 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_180508, whole genome shotgun sequence.
ACCESSION   DASQSL010000302 DASQSL010000000
VERSION     DASQSL010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2752
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180508"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            190..1959
                     /locus_tag="VE844_03035"
     CDS             190..1959
                     /locus_tag="VE844_03035"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HZC00357.1"
                     /translation="MAELEKLGRYRIEAVLGKGAMGVVYKAYDPELRQSVAIKTIRKE
                     ILDQDHATDNILLERFKNEVIAGRRLMKHRNIVGTYEFGQEQEICFIVMEYVEGKPLK
                     DYLDKGHRFTLGEVMNFMRQLLDALQFAHEQGIVHRDIKPANIMLTPHGQIQITDFGI
                     AKIDSASMTKTGTVMGTPSYMSPEQCLGQHVDARTDIFSAGVVLYQLLTGENPFVGTS
                     AMTTMHKVLNVTPINPSQFNVHISKVFDRVMQKALAKRPDARFQSAREFAQALQSVVI
                     QKEEKSAETAEDETTVLEVEVPKAPPKPEKKPKPAQEQPTPWRPGKLGILGIALTIAL
                     GVIGAVVLVPPEPTKTPSEAELLTSPKPALDQAKLDALLSSFTCARLQADFDPDRVLL
                     SGHLQPEDLPKLKQRLAEIPGLPEVIYEITALTWPYCELVEILFPLKQLNQEQRLGLE
                     ITPYQHPSHYVEEENLVLAYTIPSYNSYIYIDYYQLDGGVIHLFPNGMGLNKPVTAKT
                     RHILGDNAKGQKQWQIHPPFGTEMIVIIASSTPLFDQPRPELEQAKDYLSALRKAITV
                     KTGQGQLAADYFSIITKATSASS"
     gene            1966..>2752
                     /locus_tag="VE844_03040"
     CDS             1966..>2752
                     /locus_tag="VE844_03040"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HZC00358.1"
                     /translation="MNHHSLSHLRAAGLSDVGCKRASNEDNFCIDEALGLLLVADGMG
                     GHAAGEIASQEAVTSLSAFLRQYRSTMEMPAPEAAIAHEDPYHTQPITSETMVFAAQE
                     GDWEDHDRTLEDLPNPAIVAITAAIQYANQRIYAMNQEMGYRDKQGMGTTVVGLWLPG
                     EGLNQAAIFHTGDSRLYLYRAGQLLRLTKDHTLYQQWEDYGRIGPSPARNTLLRALGP
                     SAQVTADVGLHALLSGDLILLCSDGLTSMVSDPMIAAISAQHES"
BASE COUNT          681 a          768 c          716 g          587 t
ORIGIN      
        1 aatcctgact atcttatggc gaacggctat actggcttgt actacgggtt ggccaaggaa
       61 caattcaatc tacaggcgct cagtcttatt tcaaccacgg cagcggcctg agggtcagga
      121 gattaacctt cttccttcta attaaggagt tccaaaaaca aggaatgatg ctgaaaggca
      181 taaggatcca tggctgagtt agaaaaactc ggaagatacc ggattgaagc agtgctcggc
      241 aaaggcgcga tgggggtcgt ctataaggcc tatgatccgg agctccggca gagcgtagcg
      301 attaagacca tccgcaagga gatcctcgat caagatcacg cgaccgacaa tattctcctt
      361 gaacgtttta aaaacgaggt catcgccggt cggcgattga tgaaacaccg caatattgta
      421 gggacttacg agtttggcca ggagcaagag atctgcttta tagtcatgga gtatgtcgaa
      481 ggtaagccgt taaaggacta tctcgacaag ggacaccgct ttacgctcgg ggaggtcatg
      541 aacttcatga gacaactcct cgacgccttg cagttcgccc atgagcaagg gatcgtgcac
      601 cgtgacatca agcctgcgaa tatcatgctc accccgcatg ggcagatcca gatcaccgat
      661 ttcggcatcg ccaagatcga cagcgcctct atgaccaaga ccgggacagt tatgggcaca
      721 ccgagctata tgtcccctga gcagtgcctc ggccaacatg tggatgcccg caccgatatc
      781 ttttctgcgg gggtagtgct ctatcaactg ctgacgggcg aaaacccctt tgtagggacc
      841 tcggccatga ccactatgca taaggtgctc aacgtcacgc ctattaatcc gtcgcaattc
      901 aatgtccata tctccaaggt cttcgaccgg gttatgcaaa aggccctggc caaacggccc
      961 gatgcgcgct ttcagtcggc gcgagagttt gcccaagcct tgcagtccgt cgtaattcaa
     1021 aaagaggaaa agagtgcgga gacagcggaa gatgaaacta cggttcttga ggtagaggtt
     1081 cccaaggcgc cacccaaacc tgagaaaaaa cctaaacctg cgcaggaaca acctacccca
     1141 tggcgccccg gcaagttagg catcctcggt attgccctga ccatcgccct gggggttatc
     1201 ggtgcggtgg tgctcgtgcc tccagaacct accaaaacgc cgagcgaagc agagctgcta
     1261 acctccccga agcccgcgct cgatcaggcg aaactcgatg cacttttgag cagctttacc
     1321 tgtgcccgtt tgcaggcaga cttcgatcct gaccgggtcc tcctaagcgg acatctacag
     1381 cccgaggatc tgcccaagct taaacagagg ttggctgaga tcccgggcct tcctgaggtg
     1441 atctacgaaa ttactgcctt gacgtggccc tactgtgagc tcgttgagat cctttttcct
     1501 ctcaagcagt taaaccagga acaacggctg ggtcttgaga tcacacccta ccagcatcca
     1561 tcacactatg tcgaggagga aaatctggtg cttgcctaca ctatacccag ctataattct
     1621 tatatctaca ttgattacta tcagctcgat ggaggagtca tccatctgtt cccgaatgga
     1681 atgggcctca ataaaccggt cacagctaaa acccgccaca ttttaggcga taacgccaag
     1741 ggccagaagc aatggcagat ccatccgcct tttggtactg aaatgatcgt gatcatcgct
     1801 tcttccaccc cactctttga ccaaccccgc ccagagcttg aacaagccaa agattatctg
     1861 tcggccttgc gtaaggcgat aacggtaaag acaggccagg ggcaattagc cgccgactat
     1921 ttctccatca ttaccaaagc cacatccgcc tcaagttagg gcattatgaa ccaccattcc
     1981 ttatcacacc tgcgggcagc cggtttaagc gatgtaggct gtaaacgtgc ctccaatgaa
     2041 gacaacttct gtatcgatga agccctggga ctcttgctgg tggccgatgg tatgggaggg
     2101 catgcggccg gcgagatcgc aagccaggag gcagtcacct cgctcagcgc gtttctgcgc
     2161 caatatcgct ccacgatgga gatgcccgcc cctgaggcag cgatagcgca tgaggaccca
     2221 taccatactc agcctattac ttcagagacg atggtcttcg ccgcacagga aggggattgg
     2281 gaggatcacg atcgcacctt agaagatctc cctaatccag cgatagtggc tatcacagcg
     2341 gccatccagt atgccaacca gcgtatctac gccatgaatc aagagatggg ataccgggat
     2401 aaacagggca tgggcaccac ggtggtgggg ttatggctgc ctggtgaagg cctcaaccag
     2461 gccgctatct tccataccgg cgacagtcgc ttgtatttat atcgcgccgg gcagttactg
     2521 cgcctgacca aggatcacac cctgtaccag cagtgggaag actatgggcg gatcggacca
     2581 tcccccgccc ggaataccct gttgcgggcc ctcggtccat cagcgcaagt gaccgcggat
     2641 gtcggcctgc atgccttact cagtggggat ctgatcctgc tttgttcgga tgggctcact
     2701 tccatggtgt ctgatccgat gatagcggcg atctcagcgc agcacgagag cg
//
LOCUS       DASQSL010000303         2193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_57292, whole genome shotgun sequence.
ACCESSION   DASQSL010000303 DASQSL010000000
VERSION     DASQSL010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2193
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57292"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..885
                     /locus_tag="VE844_03045"
     CDS             <1..885
                     /locus_tag="VE844_03045"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HZC00359.1"
                     /translation="RVIGCDGVQSHVRGAILQATSGHCADEPLEHSYKELSIPPGPNQ
                     SFRMEPNALHIWPRGEYMLIALPNLDGGFTATLFLPNEGEQGFSMLTTEAQVSAFFNE
                     QFPDTLALMPRIKEEFFSHPTGRLSTIRATPWHFQDRALIVGDAAHAIVPFHGQGMNC
                     AFEDCSAFHQCLARFGEDWDSVFAEFEAMRKPNADAIADLSLENYVEMRSTVRDPRFQ
                     LKKELAWRLEDRHPDQFIPRYSMVMFHRIPYAEAKRRGVIQDEILEMLTEDIHDLDKV
                     DYAYADRLIEERLGGESV"
     gene            928..1569
                     /locus_tag="VE844_03050"
     CDS             928..1569
                     /locus_tag="VE844_03050"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HZC00360.1"
                     /translation="MEMNPTALERIRVASRPEIARLSVAQFHRMIELGILPEGEPIEL
                     IDGILVRKDNSDAGGDPMTHGPRHAFCVQRLKDLEGRVKPYQCHLRQQLPIILSDNRE
                     PEPDIALVRGTIDDYSDHHPDASDCLTVIEVADSSLEYDRTTKARIYAAVEIPFYWIV
                     NIPERQIEVYESPVASEERYAKQMARRYRRETDGVKVPWPQLSVRGSSRRLGL"
     gene            1990..>2193
                     /locus_tag="VE844_03055"
     CDS             1990..>2193
                     /locus_tag="VE844_03055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016860335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZC00361.1"
                     /translation="MARNETNEVRQLQRTLYYKAKQDKEVKFYSLYDKAYREDVLWEA
                     WRQVKANQGAPGVDGETIEAIVSS"
BASE COUNT          521 a          562 c          648 g          462 t
ORIGIN      
        1 cgggtgatcg gctgcgatgg cgtgcagtca catgtccgcg gcgctatttt gcaagcgacc
       61 tcgggtcact gcgccgacga acccttggaa catagttaca aggagctgag tatcccacca
      121 ggcccaaacc agagttttcg gatggagccc aatgcgctgc atatctggcc gcgtggcgag
      181 tatatgttga tcgccctgcc caatctcgac ggcgggttca ccgccacctt gtttctaccg
      241 aacgaaggcg aacagggctt ttccatgctc acgaccgagg cacaggtctc ggcctttttc
      301 aacgagcagt ttcccgatac cctggcgctg atgccgcgga tcaaagagga gttcttcagt
      361 catcccaccg gcaggcttag caccatccgc gcgacgccct ggcattttca agaccgggcc
      421 ttgatcgtgg gtgatgcggc gcacgccatc gtgcccttcc acggccaggg catgaattgc
      481 gcgtttgagg attgcagtgc cttccatcaa tgcctcgcac gcttcggcga ggactgggac
      541 agcgtcttcg ccgagttcga agccatgcgt aaacccaatg ccgacgccat cgcggatctc
      601 tcgctggaga actacgttga gatgcgcagc accgtgcgcg atccgagatt tcaactgaag
      661 aaggaactcg catggcgcct ggaagaccgc caccccgatc aattcattcc ccgctattcg
      721 atggtcatgt tccaccgtat cccctatgcc gaggccaagc gccgcggtgt tatccaagat
      781 gagatactgg aaatgcttac agaggatatt cacgatctgg ataaggtaga ttatgcctat
      841 gccgatcgct tgatcgagga acgactgggt ggagagtccg tatagattcg ataatataaa
      901 tattcagttg agtcaaagag ctgcaacatg gaaatgaatc cgacagcgtt ggagcggatc
      961 agggtggcaa gtcgaccaga gatcgcgcgt ttgagtgtcg cccaattcca tcgcatgatt
     1021 gagcttggca tccttcctga aggcgagcca atcgaattga tcgacggtat cttggtccgc
     1081 aaggacaaca gcgatgctgg aggggatccg atgacccatg gaccaagaca tgcgttttgc
     1141 gttcagcggc tcaaggacct tgaaggacgt gtgaagccgt accagtgcca tctccggcag
     1201 caacttccga tcatactctc agacaatcgc gaacctgaac ccgacatagc tctcgttcgg
     1261 ggtacaattg acgattactc tgatcaccat cccgatgcat cggattgcct gaccgtcatt
     1321 gaagttgccg atagttcgct cgaatacgat cggacaacca aggcgcgcat ttatgctgct
     1381 gtcgaaattc cgttttattg gattgtgaac atcccggagc gtcagatcga agtatacgaa
     1441 tcaccagttg cttcagaaga acgctacgct aagcagatgg cacgccggta caggcgtgag
     1501 actgatgggg tgaaagtccc ctggccccaa ctatccgtgc gggggtctag caggaggttg
     1561 ggtttgtgaa gtgattcgca ggcctaagtt accttgaacg atagatgcaa agcagcgggc
     1621 tgcaacgtaa gtgaactcga atcagcctcg tgatacgtaa gaagtgtgcg ccgaccgtat
     1681 cgtctgcgcg ggaaggctgg aagaaggcgg ggataaacgg ataagtgaac cgtcttcgcg
     1741 caccggggtg ttgggggtgg cacgctgtga aggtctcacg accctaggcc gggaggcctc
     1801 atgcgatgct cgttagctgc gagcaacggc tccgtataag ggtaaccgaa gttggagcag
     1861 gtcacatgag gattccgcgg ggttcatagt accgctagag ggtatgggag agcataaccc
     1921 agcccgaggg gaagggaccc tacttcagtc aatgatgttt gaagcagttg aggaggtttt
     1981 gattgcctga tggctagaaa cgaaacaaat gaagttcggc agctgcagag gaccctatat
     2041 tacaaggcca agcaggacaa ggaggtgaag ttctacagtc tgtacgataa ggcatatcgc
     2101 gaggatgtcc tgtgggaggc ttggcgacaa gtcaaggcga accaaggggc acctggggta
     2161 gatggagaga ccatcgaggc gattgtgtcg agc
//
LOCUS       DASQSL010000304         1046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_193418, whole genome shotgun sequence.
ACCESSION   DASQSL010000304 DASQSL010000000
VERSION     DASQSL010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193418"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(53..679)
                     /locus_tag="VE844_03060"
     CDS             complement(53..679)
                     /locus_tag="VE844_03060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014911092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAP family protein"
                     /protein_id="HZC00362.1"
                     /translation="MHLAILPLAITMMAGPQIMSAIIFLTTSSAVRLSVSFILGVAIA
                     TVVGLVFALALLSVLGDSVSLGDPSNGGSIGKLIQYALVVLLIALALKNYLRRESIEP
                     PRWLGALQNADRKMALKTGLLVIWLMPGDIIVLLTVATTLQQNEAGILAALPFVAATL
                     LVAALPLLLYLLYGRGAQRLMPRVREWMNTHSWLLNIITCVVFIALIL"
BASE COUNT          248 a          293 c          308 g          197 t
ORIGIN      
        1 gaacttcgca gaattcctat tctaggcact tggacgaata agggagctgt actcagagga
       61 tgagggcgat gaacacgacg caggtgatga tgttcaaaag ccagctgtgc gtgttcatcc
      121 actcgcgtac cctcggcatc aaccgctgtg cgcctcttcc gtacagcagg tagagcagca
      181 gtgggagcgc cgccaccagc aaggtagccg cgacgaacgg cagcgcggcg aggatcccgg
      241 cctcgttctg ttgtagggtc gtggcgaccg tcagcagcac tatgatgtcc ccgggcatca
      301 gccagatcac cagcaacccc gtcttgagag ccatcttccg gtccgcgttc tggagtgcgc
      361 ccagccacct gggaggctca atgctctcgc ggcgcaagta gttcttgagc gccagggcga
      421 tcagcaaaac gacaagcgcg tactggatga gcttgccgat cgaccctccg tttgaagggt
      481 cgcccagcga gacgctatcg cctagcacgg agagtaaggc tagggcgaag accaacccca
      541 cgaccgttgc gatagccaca ccgagaatga aggagacgga aagcctcacg gcgcttgagg
      601 tagtgaggaa gatgatcgcc gacatgatct gcggtccggc catcatcgtg atggctagag
      661 ggaggatggc taggtgcatg gcctcatgat gccatcctac aagctccagc gctcttgcca
      721 ctcttcgagg aacttcttag aactccgttt agccgaactt ctgagaatac cccttccagg
      781 cacttcggtg aataagccaa tctctcggca aaagtgcaaa acatcacaaa tctagcccat
      841 ttgagcgatg cgctgtgtcc aagcgcggcg tatgctgcat atcttacgtg caaatggcgc
      901 agtatccgaa taggaaagaa ggacgcacgc agcagacctc accattaagc agtgcgcgac
      961 gcatagcggg gatggtgttg gcagaaaaat ccggggatcg agggcgtccg gacccgatac
     1021 ctagagggtt tcacgctttt tgcgga
//
LOCUS       DASQSL010000305         1067 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_2548, whole genome shotgun sequence.
ACCESSION   DASQSL010000305 DASQSL010000000
VERSION     DASQSL010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2548"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..898)
                     /locus_tag="VE844_03065"
     CDS             complement(<1..898)
                     /locus_tag="VE844_03065"
                     /inference="COORDINATES: protein motif:HMM:NF042526.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system-associated FHA domain
                     protein"
                     /protein_id="HZC00363.1"
                     /translation="MPLILQVKSYGNRPPAEPLSKRFDKQGGTLGRSTDSDLVLPDPH
                     KYISRYHAEIRYREGAYYIVEISGVNPLKLNGRSLEPYQEIKLANGDSIMIGDYCLRA
                     DVVPEQAITKADLPTLMPEPALGYEIPKTGPDPAAELDSSPGFEEPGIDTWLGKEDNV
                     WEQQAQATQLEAGALPRQSEALPAFLRGISLTDLAIPAEAVPEFMQTAGKLLREFVQG
                     TMEILQESAAITDQIHIERPRIAAEENNPLKLCPTVEEALVHLLTSQGQSYLPPVSAV
                     RAALSDLKARELALVEGMRATFM"
BASE COUNT          219 a          307 c          281 g          260 t
ORIGIN      
        1 ccataaacgt agcgcgcata ccttccacca gtgcaagttc gcgcgcctta agatcgctta
       61 aagccgcgcg gacagcgctt accggaggca gataactctg gccttgcgag gtgagcagat
      121 ggaccaaggc ctcctccacc gtcgggcaaa gctttaaggg gttattctct tcggcggcga
      181 tccggggccg ctcaatgtgg atctgatctg tgatcgcagc gctttcctgg agaatctcca
      241 tcgtgccttg tacgaattca cgcaatagct tccctgccgt ttgcataaat tctggaacag
      301 cctccgccgg gatcgcgaga tctgtaaggc taatccccct cagaaacgcc ggtaaggctt
      361 cgctttgccg aggtaaagcg ccggcctcaa gctgggtcgc ttgcgcctgc tgttcccaca
      421 cgttatcctc ctttccgagc caggtgtcta ttccaggctc ttcgaagccg ggcgagctgt
      481 cgagctcagc cgccggatcc ggaccggtct taggtatctc atatcccaaa gcgggctcag
      541 gcatgagcgt gggaagatcg gccttggtga tcgcttgctc tggaacaaca tcggcccgca
      601 agcaatagtc tccaatcatt atggaatccc catttgcgag ctttatctct tgatagggct
      661 ccaacgatcg tccgttgagc ttaagaggat tgacaccgct tatctccaca atgtagtagg
      721 cgccctcgcg atagcggatc tctgcatgat agcgcgagat gtacttgtgg ggatccggca
      781 gaaccaaatc gctgtctgtc gagcgaccga gggtcccccc ttgtttatca aagcgtttac
      841 tgagcggttc tgccgggggt cgattgccgt aactttttac ctgaaggatc aggggcatac
      901 ttctcttcgt gcagcagtcc aattcgcggc gggaaacgcc cgcagtcggt cttttaaagt
      961 agcctaagtg aaccacggta attataacct atctccgaca agctggttat tttatcggca
     1021 atcccccagc cctgacgcat gaggtggcct aattttcttt tttcccc
//
LOCUS       DASQSL010000306         1019 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_57325, whole genome shotgun sequence.
ACCESSION   DASQSL010000306 DASQSL010000000
VERSION     DASQSL010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57325"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..376)
                     /locus_tag="VE844_03070"
     CDS             complement(<1..376)
                     /locus_tag="VE844_03070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00364.1"
                     /translation="MIKKLPARLLPGTLALGFAATVIAIVLGIMGVRMLPSLEDYRQE
                     IEAWVAKSGGYPVMIGSIEVSWHGIAPSIEVTDMWVLDHSRTRSLLRFARGSLRIDLV
                     ASLKQRRVIADRLSLSGMSLTLV"
     gene            complement(383..>1019)
                     /locus_tag="VE844_03075"
     CDS             complement(383..>1019)
                     /locus_tag="VE844_03075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012971703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ribonuclease E/G"
                     /protein_id="HZC00365.1"
                     /translation="VLRRKVELKSGGYLIIDQTEAMTTIDVNTGGFVGHRNLQETILK
                     TNLDAAQAVARQLRLRNLGGIIIIDFIDMADAEHQRQVLRALEKSFERDHAKVTISKI
                     SSLGLVQITRQRNRESIEHILCEPCPTCHGRRSIKTAETVCYEIFREILRGMRQFNAE
                     KFLVLASQPVVDRLLDEESEDVAQLEKLIGCPIKFRVETFYHQEQFDVVLL"
BASE COUNT          233 a          279 c          274 g          233 t
ORIGIN      
        1 gtaccagcgt gaggctcatg ccagaaaggc tcaaccgatc ggctatgacc cgacgctgct
       61 tgagcgaggc cactaaatcg atacgcaggc tgcctcgagc gaagcggagg agggaccggg
      121 tgcggctgtg atccaatacc cacatatcgg tgacctcgat gctcggcgct atcccatgcc
      181 agctcacctc gatggagccg atcatgaccg ggtatccccc gcttttagcc acccaggctt
      241 caatctcctg gcggtagtct tcaaggcttg ggagcatgcg gacgcccatg atcccgagca
      301 cgatggcaat gacagtagcc gcaaagccaa gcgcgagagt acccggtagt aagcgtgccg
      361 gtaacttctt aatcatggcg acttagagca ggactacatc aaactgttct tggtgataaa
      421 aggtttcaac gcggaacttg atgggacagc cgatcaattt ctcaagctgg gcaacatctt
      481 cagattcctc atcgagtagc ctgtcaacta caggttggga ggcaagcacg agaaactttt
      541 cggcattgaa ctgacgcata ccccgtagga tctcgcggaa gatctcatag catactgtct
      601 ctgccgtctt gatagacctt cgtccatggc atgtcgggca aggttcgcag aggatatgtt
      661 ctatgctctc acggtttcgt tggcgggtga tctgaaccag ccccaaggaa ctgatcttac
      721 tgatggtgac tttagcatga tcacgctcga agcttttttc aagcgctctt aggacttgtc
      781 gctggtgctc cgcatcggcc atatcgatga aatcgatgat gatgataccg ccgaggttcc
      841 tcaaccgaag ttgacgggca accgcctgcg cggcatcaag attggttttc aggatcgtct
      901 cttgcaggtt acgatggccg acgaagccac cggtattgac atcgatggtg gtcatcgcct
      961 ccgtctgatc gatgatcaaa tagccgcccg acttcagctc aacctttctt cggaggacc
//
LOCUS       DASQSL010000307         1131 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_126096, whole genome shotgun sequence.
ACCESSION   DASQSL010000307 DASQSL010000000
VERSION     DASQSL010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1131
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126096"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            416..934
                     /locus_tag="VE844_03080"
     CDS             416..934
                     /locus_tag="VE844_03080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011659732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin-like domain-containing protein"
                     /protein_id="HZC00366.1"
                     /translation="MMNRLRTLTLTTLALLFLGVALPSGDAVGQQKTLKEQVVGTWTY
                     VSVDTVHPDGSRVPLFGPNPQGIAIFDGNGRYALMTSRSGLPKFASNNRNEGTPEENK
                     AVVQGSISHFGRYTVNEADKTITFHIETSTFPNWNGTEQKRPFTLTGDELKWTTAASS
                     GGSAEVVLKRAK"
BASE COUNT          258 a          332 c          317 g          224 t
ORIGIN      
        1 gccaagccga agcggattgc cattaccggc taagtcacct ctcagcctag cgctccgtag
       61 gtcggcggcg tgtgatcagg cacagcccag agcctctgct ccatggctct gggctttttt
      121 gtgcctgtgc ccaccctgag cacacctcac caaatatgac gaagagccaa cctcctctac
      181 attggtgggg aatgaagccg actcgcctga acccatcctc aggccgtcgc ctgccaccgg
      241 tcatgatgcc gaaattctct cagcatcaga tccctatcga ggctattatg ctaaagaatt
      301 tccatgtacc gcgctcatcg tcgtggatcg gcgtggcgcc ggcgaacaag tgtcggacgg
      361 cgcccatgac gaggcgtcat ccggggaatg tcgatcacat cctcaagagg ggagcatgat
      421 gaaccgactt cgcacactca cactgaccac tctggcactg ctgtttctgg gagttgcgct
      481 gccttcgggc gacgcggtcg gccagcaaaa aacgctgaaa gagcaagtcg tcggaacctg
      541 gacgtatgtc tcggtcgata ctgtccaccc ggatgggagc cgggtgccgc tgtttggtcc
      601 caatccgcag ggtattgcga tctttgatgg caatggccgc tatgcgctga tgacctcgcg
      661 ctctggcctg cccaaattcg cgtccaacaa ccgaaatgaa ggtactccgg aggagaacaa
      721 agccgtcgta cagggatcaa tctctcactt cggcaggtac accgtcaacg aggcggataa
      781 gaccatcacc tttcacatag aaaccagtac gttcccgaac tggaacggga ctgagcagaa
      841 acgaccattt acgctcacgg gggacgaact gaagtggacc actgcggcgt ccagcggtgg
      901 ctcggctgag gtggtattga agcgagccaa gtaggcgccg cgcacaacgc gatcgccctg
      961 tacaccctat agtaatgcaa ctataggttt cgaggttttt aaaagcgcag atcccgcacc
     1021 ggaccatagc tctctcgagc cagaaagccg gcgttttttt gttgcatcag tgtcggagaa
     1081 aagtgccagg ggagggaata aggaaggtcc ccacgcccct ggtaagcctg c
//
LOCUS       DASQSL010000308         1320 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_126103, whole genome shotgun sequence.
ACCESSION   DASQSL010000308 DASQSL010000000
VERSION     DASQSL010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1320)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1320)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1320
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126103"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..337)
                     /locus_tag="VE844_03085"
     CDS             complement(<1..337)
                     /locus_tag="VE844_03085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZC00367.1"
                     /translation="MDSKPRILMYSHDSYGLGHLRRTLSLAEAFVEHDPGVGVLILTG
                     STVSNAFRMPQGIDLVKLPSAVKVSNGVYKPSRLPIKFEHLRNLRSGLILNAAESFSP
                     DAFIVDKAPL"
     gene            639..>1320
                     /locus_tag="VE844_03090"
     CDS             639..>1320
                     /locus_tag="VE844_03090"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HZC00368.1"
                     /translation="MEAIVGPSRNPYHFIVGCQRSGTTLLGRMVDANPHVAIIHETRW
                     IASWFEDRGGLTPEGYVTRELIPLLLDHPRFAKLQIDREDLEGLLVTGDPVLYRDFIT
                     GIFDLYGNKHGKDLVGDKSPRYVRFILTLHQLWPHAKFVHIVRDGRDVCLSAIDWRSG
                     GELRRRFLPLHEDPVTTTAVWWDWQVRTGREGGNALGPDLYYEVRYESLVSKPTEECE
                     KLCGFLGIP"
BASE COUNT          285 a          363 c          397 g          275 t
ORIGIN      
        1 ccaacggggc tttgtccact atgaaagcat cggggctgaa cgattctgcc gcgttcaaga
       61 tcaggcccga acgcaggttt cttaggtgtt cgaacttgat cggtaacctg ctgggcttgt
      121 agacgccgtt agagactttc actgccgacg gcaacttcac taagtctatt ccctgaggca
      181 tccggaaggc gttggacact gtggaacccg tgaggattaa tacacccacg ccagggtcgt
      241 gctcgacgaa ggcttccgcc agcgagagcg tgcgccgcag gtgcccgagc ccgtaggagt
      301 catgcgaata catgagtatt cttggtttgc tatccaccct tagcaacctt tccgacgtta
      361 ccacggactt cagacgttat tacgaattat ataagctcga gcgttaggat gtagatctta
      421 ttaatatctc gataagatga attgggccag tgtacccccg acggaagtca acaaggacgg
      481 tgcttggtcg actcaatagg gtagtggcag tagtgtcccc gccataggct ggcgtaagtt
      541 taatacgaga aaccctggaa acgaaccttc aaggtcggga cgaccacggg aggtacgtac
      601 gtggtggggg aaaagcagcc acttcgagag aggctgcagt ggaggcgata gtcgggccca
      661 gtcgaaaccc ctaccacttt atcgtgggtt gtcagaggtc tggcacgacg ctcctcgggc
      721 ggatggtcga cgccaacccc catgtagcga tcatccacga aacgcggtgg atcgccagtt
      781 ggttcgagga taggggcggg ttgaccccgg aaggttacgt aactcgggag ttgatccccc
      841 tgctgctcga ccacccgagg ttcgccaaac tgcagatcga tcgcgaagac cttgaaggac
      901 tgctcgttac cggcgatcct gtgctgtacc gggacttcat caccggcatc tttgacctct
      961 acggcaacaa gcacggcaaa gacctggtgg gcgacaaaag cccccgctat gtgcgcttta
     1021 tcctcaccct gcaccaactc tggccccacg ccaagttcgt ccacatcgtc cgcgacggta
     1081 gggacgtgtg cctgtcggcc atcgactgga gaagtggtgg tgagttgcgc cggcgcttct
     1141 taccgttaca cgaggatccg gtaacgacga cggccgtgtg gtgggactgg caggtgcgca
     1201 cgggccgcga gggcggcaac gctctgggcc cggatcttta ctacgaggtg cgctacgagt
     1261 cgctggtttc gaagccgaca gaggaatgcg agaagctttg cggattcctg ggcatcccct
//
LOCUS       DASQSL010000309         1687 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_2574, whole genome shotgun sequence.
ACCESSION   DASQSL010000309 DASQSL010000000
VERSION     DASQSL010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1687
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2574"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(36..239)
                     /locus_tag="VE844_03095"
     CDS             complement(36..239)
                     /locus_tag="VE844_03095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00369.1"
                     /translation="MADLSNAEVKSLARAAGLEIDEPLLSEVTYNLNALRELIDGVSP
                     PGLDQVEPLPVIPPHERSPHEHG"
     gene            complement(271..1413)
                     /locus_tag="VE844_03100"
     CDS             complement(271..1413)
                     /locus_tag="VE844_03100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011340707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC00370.1"
                     /translation="MSQGTIILGQVLKLMPRAHVESLDKIHSTGRPSRVLSRWSQFGA
                     LVFAQLAGRHSLRDVVTAMASQSEALAPLGVTPPKRSTLAEANERRPAALYHSLFTTL
                     YARCRAVAPGHSFRFKNPLFSVDSTTISLCLNLFPWARFRTAKGAIKVHTLLDHAGHL
                     PAFVVITEGKRSDIAMARGLELPRGSIVAMDRGYIDYKFLFRLTQDGVYFVTRQKVNA
                     KFKVSARFAVDWPRGVTSDQNIVLQGQNGSAYPKALRRVGYRDPETGRHYVFWTNAFH
                     LAAATIAAIYKERWQVELFFKAIKQNLKLKTFLGASENAVMTQIWVALITYLMLAFLR
                     FKSGLGLSFPQLLRLLQINLFDRRNLVDLCHPPQRQTPGGHQPYAA"
BASE COUNT          344 a          479 c          515 g          349 t
ORIGIN      
        1 gttcgcccag tgccgtggcc gagagaaaag ggatatcagc cgtgttcatg cgggctcctt
       61 tcgtgcggcg ggatgacggg taggggctca acctggtcga gtcccggagg gctcaccccg
      121 tcgatcaact ctctcagcgc attcaggtta taggtgacct cgctgagcag cggttcatcg
      181 atctccagac cggccgcccg cgccaggctc ttcacttctg cattggatag atctgccatg
      241 ttatctccca tcactgctgt ccggctaggg ttaggcggca tatggctggt gacctcctgg
      301 cgtctgacgc tgtggaggat ggcataaatc caccaggttg cgtcggtcga acaggttgat
      361 ttggaggagc cgcagcagct gtgggaacga gaggcccaag ccgctcttga acctcaggaa
      421 tgccagcatc aggtacgtga tgagcgcgac ccaaatttgg gtcatgaccg cgttctcgga
      481 ggctcccaag aaggtcttga gcttcaggtt ctgtttgatg gccttaaaga acaactcgac
      541 ctgccaccgt tctttgtata tcgccgcaat cgtggcagcg gccagatgaa atgcattggt
      601 ccagaacaca tagtgtctgc cggtttccgg gtcacggtac cccacccgcc gcagtgcctt
      661 gggataggca gagccgtttt gcccttgcag gacgatgttc tggtctgagg tcacacctcg
      721 gggccagtcg accgcaaagc gtgctgacac cttgaacttg gcattcacct tctggcgggt
      781 gacgaagtac acgccgtcct gagtcaggcg gaagaggaac ttataatcga tgtagcctcg
      841 atccatggcc acgatactac ccctgggcag ctccagccca cgggccatgg caatatcgct
      901 ccgcttgcct tcagtgatca ccacaaaggc cggcaggtgg ccggcgtgat ccaggagggt
      961 atgcaccttg atggctcctt tggccgtgcg gaagcgcgcc cagggaaaca ggttcaagca
     1021 tagcgagatc gtcgtgctgt ccacggagaa gagcgggttt ttgaagcgga aactgtggcc
     1081 aggagccaca gcccggcagc gtgcgtacag ggtggtaaag aggctatggt agagcgcggc
     1141 tggcctccgc tcattggcct cggcgagcgt agagcgcttg ggcggggtca cgccgagagg
     1201 ggcaagcgct tcggattggg aggccatcgc ggtcaccaca tcccgcaggc tgtggcgtcc
     1261 agccaattgg gcgaagacaa gagctccgaa ctggctccag cgactgagca cccggctcgg
     1321 gcgtccggtg ctatggattt tgtccaatga ctcaacgtga gctctgggca ttagttttaa
     1381 cacttggccg agaatgatgg taccctggga cacggctcga atcctccttt tggttgaagg
     1441 cggtcgcgac aacctcaatc taccaaaagg cacggctctt cgagccgttg ctcttctctg
     1501 agccggacag caatgatcaa gcctcccaat cacattctga aagaaggtga gcgcttcacc
     1561 ccgatctctc ggattgccct cgccatcggg caggaatgcg tagtacggga tgaaaaacgg
     1621 atactcggtg tgactgagca catcttgcac gagcgtcgat ttgccgacgc cagcacaacc
     1681 tgtcacg
//
LOCUS       DASQSL010000310         1178 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_111271, whole genome shotgun sequence.
ACCESSION   DASQSL010000310 DASQSL010000000
VERSION     DASQSL010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1178
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111271"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..130
                     /locus_tag="VE844_03105"
     CDS             <1..130
                     /locus_tag="VE844_03105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016700342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HZC00371.1"
                     /translation="LTEGSITMNRQGDYVMWGPGIDHSWKALSESVVITVRWPSAL"
     gene            complement(125..>1178)
                     /locus_tag="VE844_03110"
     CDS             complement(125..>1178)
                     /locus_tag="VE844_03110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016700343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HZC00372.1"
                     /translation="IATSIVTRPYWLDLGCRLDRGNDRLTLTKTASDGLIIPDDLSAR
                     HAVHRLAEAAALKVRVANMPVYRLLNIDTSQDSITGAVSLTPFAEYALTMDLLEGELI
                     EAIITRSHTRSGSLPLRDRYLPDLVSVFDVSARLCAGGALALCAIARPFDRYRGAADY
                     ALLIQQRSNQVVNATRRLAVIPKGFHEPLTDYRADAQIGATLRREMEEELFGRTDVDS
                     TVSERRTAAPMHPDRLSDPMRWLMESPDRLRLECTGFGLNLVSGNYEFASLIVIEDEE
                     FWTRYGGQVEANWESAGLQLYSSLDYQLISELITDEAWSNEGLFALLQGLRRLRELGG
                     DRINLPEITWTLSNQS"
BASE COUNT          247 a          349 c          328 g          254 t
ORIGIN      
        1 tctcaccgag ggcagcatca cgatgaatcg gcaaggtgac tatgtcatgt ggggtccggg
       61 aattgatcac tcctggaaag ctctctcgga gtcggtggtc atcaccgtgc gctggccctc
      121 ggcattatga ctggttggac agcgtccacg ttatctctgg taggtttatg cggtcgccgc
      181 cgagttcgcg caatcgtcga agtccttgta gcaacgcgaa cagtccctca ttactccaag
      241 cctcgtcggt gatcagttcg ctgatcagct ggtagtcgag gctagagtac agttgcagcc
      301 cggctgattc ccagttggcc tcgacttggc cgccgtagcg tgtccagaac tcctcgtcct
      361 cgatgacgat caggctcgcg aactcgtagt tgccgctgac caggttcagc ccaaatccgg
      421 tgcactccag ccgcaatcga tcgggactct ccataagcca ccgcatagga tcggacagcc
      481 ggtcgggatg catcggtgca gcagtacggc gctcactgac cgtgctgtcg acgtcggtac
      541 ggccgaaaag ctcctcctcc atctcccggc gaagcgtcgc gccgatctgc gcatccgccc
      601 ggtaatccgt aagtggttca tggaacccct tcggtatcac agccagtctc cgcgtagcgt
      661 tgacaacctg gttggaacgt tgttgaatca agagtgcgta gtctgctgca ccgcgatacc
      721 gatcaaatgg gcgagctatc gcacacaacg cgagtgcgcc acccgcacac aaccgagcgg
      781 agacgtcgaa cacagacaca agatccggaa gatacctgtc gcgcaacggc aatgagccgc
      841 ttcgtgtatg cgatctggtg ataattgctt cgatcagttc accttcgagt agatccatgg
      901 tcaatgcgta ctcggcgaac ggggtcaggc ttaccgctcc tgttatcgag tcctggctcg
      961 tatcgatgtt cagtaggcga taaactggca tgtttgcgac ccgcaccttc agggctgcag
     1021 cttcggcaag ccggtgcacc gcgtgcctag cgctgagatc atcaggaata atcagaccat
     1081 cagacgcggt cttggtcagg gttagtcgat cgttaccccg gtctaagcga cagcctagat
     1141 ccaaccaata tggccgagta actatactcg tcgcaatc
//
LOCUS       DASQSL010000311         1833 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_126115, whole genome shotgun sequence.
ACCESSION   DASQSL010000311 DASQSL010000000
VERSION     DASQSL010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1833
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126115"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            417..1616
                     /locus_tag="VE844_03115"
     CDS             417..1616
                     /locus_tag="VE844_03115"
                     /inference="COORDINATES: protein motif:HMM:NF020084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FIST N-terminal domain-containing protein"
                     /protein_id="HZC00373.1"
                     /translation="MATKAGVGMSRHHNPTVAGREAAEQALEEAGVSKPDFVFMFAST
                     GYDQHSLVRAVRETTGGAPLSGCSAEGTINGEDADESGFSVVVTAISSEELQWTNGLE
                     TGLRADPHAVGKQVAKDLLPHLSAETIGLFVFPDGLTLALYDFFAGLEENLPSERFLP
                     LWGGGAGNNYNPEEPTYQYCDDEVITDGVSYALLSGEAQTAWAMSHSLIPIGGERIVT
                     RSQGNVIYEIDGKPATDVFEEYLPQDALADERDWMPYAASLALCFRAPSYIKDEEYVV
                     LGVPAVRMADGSIIIQSEVSEGTSVWFSSRDKEKITTGLDRMAAQIKEQLGGAQPKLV
                     FQFECSTRGKMMFREQEKLQILKRFRQSVNPDVPWAGFYTEGRELGPVEKHNDPHLLT
                     SVVLALS"
BASE COUNT          413 a          482 c          559 g          379 t
ORIGIN      
        1 cggtgatcgg ggctgtggca gggggtttcc tcgtaggagt ggtcgcggct tcggtgctca
       61 agttcgtgct cggcgtgatc ctgatagtgt cggcggtgcg catcttctat cgctgacccg
      121 aacttccgag aatacccaaa aggcgaagtt cgcagaattc cccttctaag cacttgggtg
      181 aataagggca aagaggaagg gccgaggctg ctacggcgga ttgcgatgac attgacccgt
      241 atgcacgcca ctgatacacg ctccgcttcg actatgccct gaattacggc tcggaatcaa
      301 gatagccaga caactaccag actgccctat ggtgaggaga gatagggcgt cttaagagat
      361 gctgcgcaac ccttcctaag ctaagattgt cctgacgagc aggaggtagt acgcccatgg
      421 ctaccaaagc cggggtcggc atgagtcgac atcacaatcc caccgtagcg ggtcgtgagg
      481 ccgccgagca agcactggag gaggcggggg tcagcaaacc ggacttcgtc ttcatgttcg
      541 cctctaccgg ctacgatcag cactccttgg tgcgagcggt ccgggagact acaggaggag
      601 cacccttaag cggttgctcg gcggagggca cgataaacgg agaagacgcc gatgaatccg
      661 gtttctctgt ggttgttacg gctatctcat cggaggagct gcagtggacc aacgggttag
      721 agaccgggct tagagccgac ccacacgctg ttgggaagca ggttgccaag gacttgttgc
      781 cccacctatc tgctgagacc attggcctgt tcgtcttccc tgatgggctc accctggccc
      841 tctatgactt ctttgcaggg ctggaggaaa acctcccgag cgagaggttt ctcccactct
      901 ggggcggggg agctggcaac aactacaatc cggaggagcc aacctaccaa tattgcgatg
      961 acgaagtcat cactgatggg gtctcctacg cactgctctc gggagaggcg caaactgcct
     1021 gggccatgag ccacagcctg atcccaatcg gtggcgagcg catagtgacg cgttcccaag
     1081 ggaacgtcat ctacgagata gatggcaaac ccgccacaga cgtattcgag gagtatctgc
     1141 cacaggatgc cctcgctgac gagcgcgact ggatgcctta cgccgcatcg cttgcgctct
     1201 gcttcagagc tcctagctac atcaaagacg aagagtacgt tgtcctaggc gtacctgcag
     1261 tgaggatggc cgacggatcg ataatcatac aatcggaggt ctctgagggc acgagcgttt
     1321 ggttctcaag ccgagataag gagaagatca caactgggct agatcggatg gcagcccaga
     1381 tcaaggagca actcggaggt gcccaaccga agcttgtgtt ccagtttgag tgttcgacca
     1441 gagggaagat gatgttccgt gagcaggaga agctgcagat cctcaagcgg tttaggcaat
     1501 ctgttaaccc ggatgtgcca tgggcgggtt tttacactga agggagggag ttgggcccgg
     1561 tagagaagca caacgaccct catctcttga cgtcggttgt ccttgcccta agttgacgat
     1621 gaaagggacc atcctagcgt aacgtttgag gaggagcggc tcaccccgaa caggtaggcg
     1681 gcctcgttcc ttatcattcc tcgccctacg gctccgactt gtctgttggg aagtaagcgt
     1741 tcatgaaatc gtaatgccct atggttcaat gctgctgcaa gacactgtca attcgcgaac
     1801 ggcagcgtgg tgggggtggg tcgcgaaaag tga
//
LOCUS       DASQSL010000312         1012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_166093, whole genome shotgun sequence.
ACCESSION   DASQSL010000312 DASQSL010000000
VERSION     DASQSL010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166093"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..546
                     /locus_tag="VE844_03120"
     CDS             <1..546
                     /locus_tag="VE844_03120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00374.1"
                     /translation="RTIGLDGRISLDNRIYRVTAELIGERVEVWKGVFDLGVYVQDQG
                     GTLHGPYEPESGTIPLGTYRRWRKTERDKRIEKVEQLAEGLSIPRETMSRDRRSEETR
                     GRRFNLASIPFANPVGLAPECYASMKEARRGIFEQFDIPLATLPDTVLTALEAILAET
                     LNRREIYRRVKALFHQQAIRG"
     gene            548..>1012
                     /locus_tag="VE844_03125"
     CDS             548..>1012
                     /locus_tag="VE844_03125"
                     /inference="COORDINATES: protein motif:HMM:NF024793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZC00375.1"
                     /translation="MLTDILKTYKLSSDFSQVGFYESRELGRVAENLKELIRLGRFMA
                     LTGPIGVGKTTLIQRLKADLHKSKTVLVSESQTLEKEKVTLTTVVNALFMDFGEKPDR
                     DRESRDRKLLQLIEKCPRQVVFFIDDAHKLPPPTLTGLKTLVEKKLCVVLIGH"
BASE COUNT          233 a          270 c          299 g          210 t
ORIGIN      
        1 cgcaccatcg gcctcgatgg ccgaatctcc ctcgataatc ggatctaccg ggtcaccgcc
       61 gagcttatcg gtgagcgggt cgaggtatgg aagggagtct tcgacttagg tgtgtatgtg
      121 caggaccaag ggggtaccct ccacggacct tacgagcccg aatcgggtac catcccctta
      181 gggacttatc gccgctggcg caagacggag cgggataagc gcattgagaa agtcgagcaa
      241 ttagcagaag gcctgtcgat cccgcgcgaa acgatgtccc gagatcggcg ctcggaggag
      301 acacgtggcc gaaggtttaa cctcgcgtcg attccctttg ccaaccccgt aggtttggct
      361 cccgagtgtt acgcctccat gaaggaggcg cgacgcggga tcttcgagca atttgatatt
      421 ccgcttgcca cgttgcccga tacggtactc actgcgcttg aggcgatcct ggccgagacg
      481 ttaaaccgtc gagagatcta tcgccgggtg aaagcgctct tccatcaaca ggcgatcaga
      541 ggttgagatg ctcacggata tcttgaagac ctacaagctg agcagtgact tcagccaagt
      601 ggggttttac gagtccaggg agttgggccg tgtagcagaa aacctcaagg aactcattcg
      661 gctggggcgg tttatggcgt tgaccggtcc gattggtgtc ggcaaaacta cgttgataca
      721 aaggctcaag gccgatctgc ataaatccaa gaccgttctg gtcagcgaga gccagacgct
      781 ggagaaggaa aaggtcactc taactacagt ggtcaacgcg ctttttatgg actttggcga
      841 gaaaccggat cgtgatcgcg agagccgcga ccgcaaactc ctccaactca tcgagaaatg
      901 ccctcgccag gtggtatttt tcatcgacga cgcccacaaa ctgccacccc cgaccttgac
      961 tgggctcaag acgctggtgg agaagaagtt gtgtgtggtg ttaatcggcc at
//
LOCUS       DASQSL010000313         1489 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_28762, whole genome shotgun sequence.
ACCESSION   DASQSL010000313 DASQSL010000000
VERSION     DASQSL010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1489
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28762"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..884)
                     /locus_tag="VE844_03130"
     CDS             complement(<1..884)
                     /locus_tag="VE844_03130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006561081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00376.1"
                     /translation="MGRRRETSGAQDENFEQRPTAAQDENRRLSEQVKRLVKAEHELY
                     ELQEQLDEQIRIYRHLYEVGKKLNATLDLGEILEIATQFVLYELNFERCVALLYDPEA
                     KAFCVEAHDGYYDEASQARVTGLRFSVDDPLLTPILADSERIICAQGCDQRELFALGQ
                     VLEMAEYVAFPLGGEPQQPIGLLIAGNTARSSGYHTQIDADSEFVVGLASLVSQVATA
                     IRMRREIQSREQRLKQEARARERIEQELRVARTIQQASLPKEVPKLEGWEISPHYGPA
                     REVGGDFYDFFELPNGHLG"
     gene            complement(887..>1489)
                     /locus_tag="VE844_03135"
     CDS             complement(887..>1489)
                     /locus_tag="VE844_03135"
                     /inference="COORDINATES: protein motif:HMM:NF021926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FIST C-terminal domain-containing protein"
                     /protein_id="HZC00377.1"
                     /translation="NAESTWAVSLGTAPIGSERKVTRSQGNVIYEIDGKPALEVLQEY
                     LPDRALADDWGRYLPTFGLSFRAPNYMKDEEYFLRGINSVNKADGSVVLQTEVQEDTS
                     VWFSSRDKEKITTGLDRMADQIKEELGGAQPKLVFHFDCCSRGKVMLRDQEKMQILRR
                     FRQAVGPDVPWAGFYTYGEIGPVGEHNFFHTYTAVVLALS"
BASE COUNT          290 a          449 c          398 g          352 t
ORIGIN      
        1 cccaggtgtc cattgggtag ctcaaagaag tcgtagaagt ctcctccgac ctccctagcg
       61 ggcccatagt gaggagagat ctcccagccc tctagcttgg gcacctcctt agggagcgag
      121 gcttgctgga tggttcgggc cacccgcaac tcttgctcga tgcgctcgcg ggcccgcgct
      181 tcttgcttga gacgttgctc gcgtgactgg atctcgcgcc tcatacggat cgccgtcgca
      241 acctgcgaga cgagacttgc gaggccgacc acaaattcgc tatccgcatc gatctgtgtg
      301 tggtatcccg agcttctcgc tgtgtttccc gcgatcagca gaccgatcgg ctgttgtggt
      361 tcaccgccca gcggaaacgc tacatattcg gccatctcca aaacttgccc aagcgcaaat
      421 agctcacgtt gatcgcatcc ttgtgcgcag attattcgtt ctgagtcagc caagattggg
      481 gtaagcagag gatcgtccac agaaaatcgt aggcccgtaa cccgtgcctg acttgcctca
      541 tcgtagtatc cgtcgtgcgc ttcaacgcag aaagccttcg cctcggggtc gtacaacagc
      601 gccacgcacc gctcgaaatt gagctcatac aggacgaact gggttgcgat ctcgagaatc
      661 tcgcccagat ccaaagtagc gttgagcttc ttgccgacct cgtagaggtg acggtagatt
      721 cggatctgtt cgtcgagttg ctcctgcaac tcgtaaagct catgctccgc cttgacaagg
      781 cgcttgactt gctcagacag gcgtcggttt tcatcttgcg cggctgttgg cctctgttca
      841 aagttctcgt cttgcgcgcc tgacgtttct ctccgtctac ccatggtcaa ctgagggcga
      901 ggacaaccgc cgtgtaggtg tgaaagaagt tgtgctcgcc caccgggccg atctccccat
      961 aggtgtaaaa ccccgcccat ggtacgtccg gaccgaccgc ttgccggaac cgcctgagga
     1021 tctgcatctt ctcctgatca cgcaacatta ccttgcctcg ggagcaacag tcgaaatgga
     1081 acaccagttt gggttgggca cccccaagtt cttccttgat ctggtcggcc atccgatcga
     1141 gtccggtggt gatcttctcc ttatcccggc tcgagaacca gacgctggtg tcctcttgga
     1201 cctccgtttg taggaccaca gacccatcgg ccttattcac ggaatttatg ccccgaagaa
     1261 aatactcttc gtctttcatg tagttaggag ctctgaaact gagcccaaac gttgggagat
     1321 agcgccccca gtcgtcagcg agggcacgat cgggcagata ctcttggagc acttctaggg
     1381 cgggttttcc atctatctcg tagatgacgt ttccttgaga gcgcgtcacc ttccgctcgc
     1441 tacctatcgg ggcagtgccg agactgacgg cccaagtgga ctctgcgtt
//
LOCUS       DASQSL010000314         1618 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_193464, whole genome shotgun sequence.
ACCESSION   DASQSL010000314 DASQSL010000000
VERSION     DASQSL010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193464"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1618)
                     /gene="asnB"
                     /locus_tag="VE844_03140"
     CDS             complement(<1..>1618)
                     /gene="asnB"
                     /locus_tag="VE844_03140"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HZC00378.1"
                     /translation="GEIYNYQQLRQDLLEKGYRFSTRSDTEVILHLYEDLGERCVERL
                     RGMFAFAIWDEKRQTLFAARDRLGQKPFFFVHRGSELFFASEIKALLALDPALAELDP
                     EALDQYLSLRIIAPPRSMFRNIKKLAPAHLLTFNPDRGLKIARYWDLHYEPKLSGSED
                     ELVDALEEHLIESLRLHMVSDVPVGAFMSGGLDSTLVVAMLMKHVASEPIQTFTVGLP
                     YRQFDEAPYARKIAERYGTEHHEKTITPSLIETLPRLVWHLDEPSDPLSVCSYLIAQM
                     AREHVKVVLGGDGGDELFGGYDRYYGNRYASYYALVPAGVRKYMLGPALKLVPDGGWY
                     KSKAHQLKWLHELSFMRGSERYARSLGYFYFGPEWREVLYGPRMRDATRFFDPAASIR
                     EPFEAAHASDLVDRMLYTDSCVRLPDHPVMILDRMTMAHGLEARAPLMDHVVAEFAAR
                     LPPSLKIRGRSLRYIQYRLAERYLPKEVLERPKQGFSSALPYMLRDEYRLLFGLFLQS
                     SQLAQDGLLLQSAIDRLLLEHQTGKVDHGNR"
BASE COUNT          375 a          448 c          455 g          340 t
ORIGIN      
        1 gccgattccc atgatccacc ttgcccgtct gatgctccaa tagaagtcta tcgatcgctg
       61 attgcaggag aagaccgtct tgcgctaatt gtgagctctg aaggaacagc ccgaataaca
      121 ggcgatattc atcgcgaagc atatagggca acgccgagga gaacccttgc ttaggccgtt
      181 cgagcacttc cttgggtaga tagcgttccg ccagccggta ctggatgtag cgcagtgacc
      241 tgccgcggat ttttaaagag ggcggcagcc gtgcggcgaa ttcggcaact acatggtcca
      301 ttaatggagc gcgggcctca agcccgtggg ccatggtcat gcggtccaat atcatcacgg
      361 gatggtcggg aagacgcaca caactgtcgg tatataacat tctatcgacc agatcggacg
      421 catgggccgc ttcgaacggt tctcgtatgg acgccgccgg atcgaaaaac cgagtggcat
      481 cgcgcatgcg ggggccgtaa agcacctctc gccactctgg accaaaataa aaatagccta
      541 gactacgtgc atagcgctca cttcccctca tgaaggagag ttcgtgcagc catttgagct
      601 gatgcgcctt gctcttgtac cagcccccat cgggaacaag cttcaaagca gggccaagca
      661 tatattttcg gacgccagcg ggtaccagcg cgtagtagct ggcataacga ttcccatagt
      721 aacggtcgta gccaccgaag agctcatctc ctccatcgcc gcccaggacc accttcacat
      781 gttcccgcgc catctgggcg atgaggtagg agcacacaga gagcggatcc gaaggctcat
      841 cgaggtgcca aaccagccgg ggcagcgtct cgatcaggga aggggtgatg gttttttcat
      901 ggtgctccgt accatatctt tcggcgattt ttcgcgcata gggcgcttcg tcaaattggc
      961 ggtaggggag gccaaccgta aacgtctgga tcggttctga ggcgacatgc ttcatcagca
     1021 tggcgaccac cagcgtggag tcgaggccgc cgctcatgaa ggcgcctacc ggcacatcgc
     1081 ttaccatatg aagcctgagc gattcgatga ggtgttcttc cagcgcatcg acaagctcat
     1141 cttctgaacc gctcagcttc ggctcatagt gaagatccca atagcgcgcg atctttaagc
     1201 cccggtccgg gttgaatgtc aggagatgag cgggagcaag cttcttgata ttgcggaaca
     1261 tgctgcgcgg tggcgcgatg atccgcaggc ttagatattg atccagcgct tctggatcca
     1321 attcggcgag cgccggatcg agggcgagga gggctttgat ctcagaggca aaaaacaact
     1381 cgctgccacg gtgcacgaag aaaaagggtt tctgtccgag cctgtcacgc gccgcgaata
     1441 aagtctgtcg tttttcatcc caaatggcaa aggcaaacat gccacgcagc cgctccacac
     1501 aacgctctcc gaggtcttca tataagtgga ggatgacctc ggtatcactg cgcgtcgaga
     1561 accgataccc cttttcaagc agatcttgcc ggagttgctg gtagttatag atctcacc
//
LOCUS       DASQSL010000315         4308 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_153580, whole genome shotgun sequence.
ACCESSION   DASQSL010000315 DASQSL010000000
VERSION     DASQSL010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4308
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153580"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            32..1132
                     /gene="ftsW"
                     /locus_tag="VE844_03145"
     CDS             32..1132
                     /gene="ftsW"
                     /locus_tag="VE844_03145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006034840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HZC00379.1"
                     /translation="MACVALLLGLGLVMVASASITVADRDFQEPLHYFWRQLVAAGIG
                     ISLAVIVMKSPLHYWLRAAPLLLIAAILLLLLVLLPGIGREVNGSIRWLRLGPISLQA
                     SEPVKLCLVIYLASYLVRYREQVRSTVIGLVKPVGVLTLIAGLLLLEPDYGVTVVLFA
                     TTLGMLFMGGVSMDRFIRWGGGAVGVLGGIGLLAPYRLARLTTFINPWADPYHTGFQL
                     TQALIAFGRGEWFGVGLGGSVQKLFYLPEAHTDFILAVLAEELGLIGTLVVIASFSFL
                     VWRAFSIGSQAERAGRLFAAYLAFGIGLLIGLQAFINIGVNMGVLPTKGLTLPFISYG
                     SNSLIVTCLSLGLLLRIEYEMRFDPEGRSYVT"
     gene            1122..2207
                     /gene="murG"
                     /locus_tag="VE844_03150"
     CDS             1122..2207
                     /gene="murG"
                     /locus_tag="VE844_03150"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005960912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HZC00380.1"
                     /translation="MSPRAILIMAGGTGGHIFPALAVADYLHEQGVPLWWLGTLQGLE
                     SKIVPQAGYRLFTITITGIRGKGLSRQLLAPVRVVWALGQSLWVLLRYRPAAVLGMGG
                     FVSGPGGIAAWLLRIPLLIHEQNAILGVTNRLLARFASRVMEAFPGTFSVVHKPVHTG
                     NPVRREIMHIPPPHIRLAERLNQPLRLLVLGGSQGAEILNQLVPRAVAQVQIPAPLSI
                     WHQSGRGREEATRRRYAELTIGARVEPFIENMAAAYSWADLVVCRAGALTLAELTAAG
                     LASILVPYPSAVDDHQTANARYLAAAGAAILMPQSEFGAERLAAVLTELQAAPSRLLR
                     MSEHARNLACTEATQEVARICREMAHV"
     gene            2200..3675
                     /gene="murC"
                     /locus_tag="VE844_03155"
     CDS             2200..3675
                     /gene="murC"
                     /locus_tag="VE844_03155"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003448452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HZC00381.1"
                     /translation="MFSLDVHAMRRVRRIHFVGIGGAGMSGIAEVLHNLGYEVSGSDI
                     QQNASTHQLQQLGIRISLGHARAHVEGSDAIVISSAIDKDNVEVAAARQCRIPVVPRA
                     QMLAELMRFRYGIAVAGTHGKTTTTSLIASLLAEGGLDPTFVIGGRLTSAGSHARLGA
                     GNYLVAEADESDASFLYLQPFIAVLTNIDADHMDTYQGDFGRLCKTFVEFLHHLPFYG
                     LAVLCMDDPIVRERVLPRITRPVLTYGIDESADVRASAITQQQAVTHFRVCLPAGEVP
                     FEVTLNLPGNHNVLNALAAIAVARELGVANEIICRGLARFEGIARRLQRVGEIKVGGA
                     SALLIDDYGHHPREIAATIEAIRNGWPDRRLLVAFQPHRYSRTHDLFQDFVAVLSTVD
                     ALVLFDIYPAGEKPIPGADGQTLCRAIQRRGRVDPVWLDHPLDLVEIVPCLLADGDIV
                     LTLGAGTIGLLAPLLMERFGEACPGLEDGPYLLPAVQHAPA"
     gene            3682..>4308
                     /locus_tag="VE844_03160"
     CDS             3682..>4308
                     /locus_tag="VE844_03160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010961652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HZC00382.1"
                     /translation="MNNRIASFTGLRGKLRYREPMSKHTTWRVGGPADCFYQPADRED
                     LCDFMAQLPPAEPIFWLGLGSNLLVRDGGIRGTVICTAGRLDGYRFIDDATIRIEAGM
                     PCAKLARITAQAGYAGAEFMAGIPGTLGGALAMNGGAFGGESWTLVRRVETVDRQGRR
                     QVRDAGEFQVGYREIQGRKDEWFLTADLGLTRDPERQGRHRIRSLLAQR"
BASE COUNT          758 a         1173 c         1402 g          975 t
ORIGIN      
        1 cccgtggtgg gttgcctacg atcccgggct gatggcctgc gttgcattac tgcttggtct
       61 cgggttggtt atggtcgcct cggcctcgat cacagtagcg gatcgggatt ttcaagagcc
      121 gctccattat ttctggcgtc aattggtcgc ggcgggcatc gggatctcgc tggccgtgat
      181 agtcatgaaa agcccgctgc attattggtt gcgtgcggcc ccattattac tgatcgccgc
      241 gatcttgctg ttgctgctgg tattgctccc aggaatcggt cgcgaggtca atggcagcat
      301 acgctggctg cgtctcgggc cgatctcgct tcaggcatca gagcccgtta agctctgcct
      361 cgtcatttat ctggcgagct atctggtccg ctaccgcgag caggtgagat cgaccgtgat
      421 cggcttggtt aaaccggtgg gtgtgcttac gcttatcgcg gggctgctgc tgctcgaacc
      481 cgattatggg gttaccgtgg tgttgtttgc gaccacgctc ggcatgctgt ttatgggcgg
      541 ggtctcgatg gatcggttta tccgctgggg gggaggcgcg gtcggggtgc tcgggggtat
      601 cggcctgctc gccccttacc gcttggcgcg attgacgacc tttataaatc cctgggccga
      661 cccttaccac acgggattcc agctgaccca ggcgctgatt gcctttggcc gtggcgaatg
      721 gttcggggtc ggtttgggcg gcagcgtcca gaaattattt tatctacccg aggcccacac
      781 cgacttcatc ttggcggtgc tcgccgagga gctcggcctc ataggcacgc tggttgtgat
      841 cgcctcattc agcttcctgg tatggcgggc cttcagcatc ggcagccagg ccgaacgtgc
      901 cggacgcttg ttcgccgcct acctggcctt tggcatcggt ctccttatcg gtctgcaagc
      961 gtttatcaat atcggggtca atatgggcgt gctgcccacc aaaggcctga ccttgccctt
     1021 catcagttat ggcagcaata gcctgattgt gacctgcctg agcctcggtt tgttgttgcg
     1081 gattgaatac gagatgcggt ttgatccaga agggaggagc tatgtcacct agggctattc
     1141 tgatcatggc cgggggtacc gggggtcata tcttcccggc actggcagtg gcggattacc
     1201 tacatgaaca gggggtaccc ctgtggtggc tcggaaccct ccagggactg gagagtaaga
     1261 tcgtgcctca ggcaggctac cggttgttta cgatcacgat caccggcatt cgcggtaagg
     1321 gactgagtag gcaactttta gcgccggtca gggtagtgtg ggcactggga cagtcgctgt
     1381 gggtgctctt gcggtatcgt ccggcggccg tactcggcat gggaggattt gtcagcggtc
     1441 ctggcgggat agcggcctgg ttgttgcgca tacccctttt gatccatgag caaaatgcca
     1501 tccttggcgt taccaatagg cttctggccc gcttcgcaag ccgggtgatg gaggcatttc
     1561 cggggacctt ctcagtcgtg cataagcccg ttcatacagg caaccccgtc cgccgcgaga
     1621 tcatgcatat cccaccgccc cacatacgtt tggccgaacg ccttaatcag ccgctgcgat
     1681 tgttggtatt gggtggaagc cagggggcgg agatcttaaa tcagctggtg cccagggccg
     1741 tggcgcaggt gcagatccca gcaccgctca gcatctggca tcaaagtggt cgcgggcgtg
     1801 aggaagctac gcgccggcgt tatgccgagc tcaccattgg agcacgggta gagcctttta
     1861 tcgagaatat ggccgccgcc tatagctggg cggatctggt ggtgtgtcgg gcaggtgcgt
     1921 tgaccctcgc cgagcttaca gcggcaggcc tcgcttcgat cctggtcccc tatcccagcg
     1981 ccgtggatga tcaccaaacc gccaatgccc gctatcttgc agcggccgga gcggccatcc
     2041 tcatgccgca atccgaattt ggggcggagc ggctggctgc agtgcttacg gagcttcagg
     2101 ctgcaccatc ccggctgctc aggatgtcgg agcacgcgcg aaatttggcg tgtaccgagg
     2161 ctacccaaga ggtagcgcgg atctgtaggg agatggcgca tgtttagtct agacgttcat
     2221 gctatgcgcc gagtccggcg tatccatttt gtcggcatcg gtggagccgg tatgagcggg
     2281 atcgcggagg tgctgcataa tctcggctat gaggtgtccg gttccgacat ccagcagaac
     2341 gcaagcaccc accagctgca acaactcggg atcaggatca gcctgggaca tgctagagct
     2401 catgtggaag gtagcgacgc catcgtcata tcgagcgcca tagacaagga caatgtcgag
     2461 gtcgccgcgg cccggcaatg ccgtataccg gtggtgccgc gggcgcagat gctggcagag
     2521 ctgatgcgtt tccggtatgg cattgcggtc gcaggtaccc atggcaagac caccaccacg
     2581 agtctcattg ccagtctact ggccgagggc gggttggatc cgacctttgt catcggcgga
     2641 cgcttaacca gcgccggcag ccacgcccgg ctaggggcgg gaaattacct ggtggcggag
     2701 gccgacgaga gcgatgcctc gtttttatat ttgcaaccat tcatagcggt cttgaccaat
     2761 atcgacgccg atcatatgga tacctaccag ggtgattttg gccgattgtg caagaccttt
     2821 gtcgagtttc ttcaccatct acccttttat gggctggcgg tgttatgtat ggacgatccg
     2881 atcgtgcgtg agagggtctt accccggata acgagaccgg tcttgaccta tgggatcgat
     2941 gagagcgccg atgtccgtgc atccgcgatt acgcagcagc aggcggttac ccattttcgg
     3001 gtatgcctgc cagccgggga ggttcccttc gaggttacgt tgaacctacc cggtaaccac
     3061 aatgtcttga atgcgctggc ggcgattgcc gtagcgcgtg agcttggggt ggcgaacgag
     3121 attatctgcc gggggcttgc gcgcttcgaa ggtatcgccc ggcggttgca acgggtaggt
     3181 gagatcaagg tgggcggggc gagcgccctg ctcatcgacg actatggcca ccatccccgg
     3241 gagatcgccg ccaccatcga ggcgatccgg aatgggtggc ccgatcggcg gctgctggtg
     3301 gccttccagc cccatcgcta ttcccggacg cacgatctgt ttcaggactt cgtcgcggtg
     3361 ctatcgacgg tcgacgcgct ggtcttattc gatatctatc cagccggcga aaaaccgatc
     3421 ccgggtgcgg atggacaaac gctgtgccgc gctattcagc gacgaggccg ggtggatccc
     3481 gtgtggttag atcaccccct ggatctggtg gagatagtgc cgtgcttgct agcggatgga
     3541 gatatcgtgc tgacgctcgg ggccggcact atcggcctcc ttgctccgct attgatggag
     3601 cggtttggag aggcttgtcc tggtcttgag gatggcccat acttactacc tgcggtgcaa
     3661 catgcgcctg cttgaatagc gatgaacaat cgaatagcca gcttcaccgg cttgcgtggg
     3721 aaactccgct accgggaacc tatgtccaaa catacgacgt ggcgggtagg tggtccggcc
     3781 gactgctttt atcaaccggc ggatagagag gatctgtgtg actttatggc gcagttgccc
     3841 cctgcggaac cgatcttctg gttggggctc gggagtaacc tgttggtgcg ggatggtggg
     3901 atccgaggta cggtgatctg cacagcgggc aggctcgacg gataccggtt tatcgatgac
     3961 gctaccatcc gtatcgaagc agggatgccc tgtgccaagc tggcgcgcat caccgctcaa
     4021 gcgggctatg caggggccga atttatggcg gggatcccgg gcacactggg tggggctttg
     4081 gcgatgaatg ggggggcgtt tggtggagag agctggacct tggtcaggcg ggtggaaacc
     4141 gtggatcggc agggtcgccg gcaggtacgt gatgccggtg aatttcaagt gggttaccgt
     4201 gagatccagg ggcgcaaaga cgaatggttt ttgacggcgg atcttggact tacccgggat
     4261 cctgagcgcc agggtaggca tcgcattcgc tccttgcttg cccaacgc
//
LOCUS       DASQSL010000316         1282 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_153584, whole genome shotgun sequence.
ACCESSION   DASQSL010000316 DASQSL010000000
VERSION     DASQSL010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1282
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153584"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..506
                     /locus_tag="VE844_03165"
     CDS             <1..506
                     /locus_tag="VE844_03165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009151701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HZC00383.1"
                     /translation="SVNVSAHQLKDQAFARTVEELLTAHALPPECLELEFTESAMVQE
                     ETLSTVCAIARLGVTLAVDDFGTGYSSLNYLKRFPIDTLKIDQSFVRDLESDPNDAAL
                     IRAIIAMARSLQLRVIAEGAETEPQRLLLSKYGCLEYQGFLFSPPVPAEAFTARIQGV
                     RNECEPY"
     gene            763..>1282
                     /locus_tag="VE844_03170"
     CDS             763..>1282
                     /locus_tag="VE844_03170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00384.1"
                     /translation="MASLALLKTDNVYYSMPTIRIQRIQTLQALDAMKDIWTGLEHRE
                     GGPSIFQSWLWNRTWCEHVLSSRLQARLDVRVVEDGAGRVLAILPFFEEALAGPIARL
                     TQFLGHRMSCHNDILLADPGDSELAQQVAVSLVEDLGYRTVLHLRHLRSESLFTKQLI
                     AAQLADPQCPLLR"
BASE COUNT          273 a          381 c          345 g          283 t
ORIGIN      
        1 tcagtgtcaa cgtttcggcc catcagctca aggatcaggc gtttgcccgc acggtggagg
       61 agctgctcac cgctcacgcg cttccacctg aatgcctcga gctcgagttc accgagagcg
      121 cgatggtgca agaggaaaca ctttccaccg tgtgcgcgat cgcccggctc ggggtgacgc
      181 ttgcggtgga cgacttcggc accgggtatt cgtcgctgaa ctatctcaag cgtttcccca
      241 tagacacact caagatcgac cagtccttcg tgcgcgatct tgaaagcgat cccaacgacg
      301 cggcgctcat ccgagcgatc atcgccatgg ccaggagcct gcaattacgc gtcatcgccg
      361 aaggtgccga gaccgagcct caacgtctgc tgctctccaa gtacggctgc cttgaatatc
      421 agggattcct ctttagtccg ccggtcccgg ctgaggcgtt cacagcacgg attcagggcg
      481 tgaggaacga gtgcgagccg tattaaagct tcctggtagc gggcggtaca taagttacct
      541 ctcctcacag aggagacagg gcacctgaaa cgcgatgagg atgccagccg ctaagtcacc
      601 tcccccgtgg ggaggggaga gggaaaccct gctcccgcac tcttctcagt cctgcagaga
      661 tccaatcccc gtaaccctac gggtgcatat aaattagcac ataatttgca tgtggtcgga
      721 cacgccatct cagacgtcaa aacgctcagg ctctcgattt gtttggcctc tctagccctg
      781 cttaaaaccg ataatgtcta ttactcaatg cccacaattc gaatacaacg gattcaaacg
      841 ctccaggcac tggatgccat gaaagatatt tggaccggcc tcgaacatag agaaggaggc
      901 ccatcgattt tccagtcctg gctatggaac cgtacctggt gcgagcatgt gctcagcagc
      961 cgtttgcagg cccgcctcga tgtaagggtt gttgaagacg gtgccggtcg tgttttggct
     1021 attcttccct tttttgagga agcgctcgcg gggccgatag cccgtctgac ccagtttctc
     1081 ggacaccgca tgtcctgtca taacgatata ctgctggccg atccaggaga ttccgaactt
     1141 gcacaacagg ttgcagtttc gctggttgaa gatttaggct acaggacggt gctccatcta
     1201 cgccatctgc gcagcgagtc gctcttcacc aagcagctta tcgcggcgca gcttgccgat
     1261 cctcagtgcc cattgctacg gc
//
LOCUS       DASQSL010000317         1558 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_193478, whole genome shotgun sequence.
ACCESSION   DASQSL010000317 DASQSL010000000
VERSION     DASQSL010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1558
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193478"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(36..758)
                     /locus_tag="VE844_03175"
     CDS             complement(36..758)
                     /locus_tag="VE844_03175"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family glutamic-type intramembrane
                     protease"
                     /protein_id="HZC00385.1"
                     /translation="MARHHVQPTYFQLSRSPHYSLVFAIPLLMAYEGFALFLNHSDLY
                     GIRNSADVFLKLFLAYMGIHGFFGFGAAMVVAIVLLRIAGEGPRFAALRFGVLVWMLA
                     ESLVYSLVFGGVVSAITRLLLAQPFPLSRSAQILVSLGAGIYEEFVFRVVLLAALVFL
                     LHRLLHLRQNLAYGVAAIIGAMLFSAFHYVGPFGDPLQLPSFTFRFIAGLILTGLYLA
                     RGYGITAYTHSLYDLWLTFGVI"
     gene            complement(768..>1558)
                     /gene="hflC"
                     /locus_tag="VE844_03180"
     CDS             complement(768..>1558)
                     /gene="hflC"
                     /locus_tag="VE844_03180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018206525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HZC00386.1"
                     /translation="TLYSVAETEQAVVTQLGRPVRLVRTPGLHLKVPFLQQLTFFENR
                     LLDYDTAPAPVITRDKKNLVVDNYAKWQISDPLKFLQTVQNEAGAQARLDDIIYSKVR
                     EQLGLHDLVEVIATQRDAIMRAVTLGSHEAATAYGIAVVDVRIRRADLPPENAQAVYG
                     RMRTEREREAKRYRSEGQEEALKIRAETDKQKTIMLAEAYEQEQAIRGEGDAAAIRVY
                     AGTFQQDPDFFDFVRTLEAYRKSLKGKTTLVLPPQMEFLRYLRE"
BASE COUNT          390 a          457 c          413 g          298 t
ORIGIN      
        1 atgtcatcac gtgttgccat agcataaagc cctccttaaa tcaccccaaa agttagccat
       61 aaatcgtaaa ggctgtgtgt gtaggcggta attccatagc cccgggccaa gtagagtccg
      121 gtcaaaatca atccggcaat aaatcgaaag gtaaacgacg ggagctgcaa gggatcgccg
      181 aacggtccga cgtagtgaaa cgccgagaac aacatggccc cgatgatcgc cgccacccca
      241 tacgccaggt tctgccgcag atgcaataac cggtgcagca ggaacaccag cgccgccaag
      301 agcacgacgc ggaagacaaa ttcctcatag ataccggccc ccaacgagac cagtatttgt
      361 gccgatcgac tcaaagggaa tggttgcgct aacagcaacc gagtgatcgc gctcaccacc
      421 cccccaaaga ccagcgagta aaccaaactc tcggcaagca tccataccaa gacaccgaag
      481 cgaagagccg caaagcgtgg cccttctccg gcgatacgca agaggactat ggccacaacc
      541 atggccgcgc cgaagccgaa gaagccgtga atgcccatat acgctaggaa taacttcagg
      601 aacacatcgg cgctattgcg aatgccgtat agatcggagt ggttgaggaa cagcgcgaac
      661 ccttcgtagg ccatgagcaa tgggatggca aaaacaagac tgtaatgtgg ggagcgcgag
      721 agttgaaaat acgtcggctg cacatggtgc ctggccatgg ggattaatta ctcacgcaga
      781 tatctgagga actccatctg aggcggcaag acaagagtgg ttttcccctt caacgatttt
      841 ctataggctt caagtgtgcg cacaaagtca aagaagtccg gatcttgctg gaacgtcccc
      901 gcataaacac ggatcgccgc agcatcgccc tcgccccgaa tcgcttgctc ctgttcgtag
      961 gcttcggcca gcatgatagt cttctgctta tcggtctccg cccgaatctt gagggcttcc
     1021 tcttgccctt cggagcgata gcgtttggcc tcacgttcgc gctccgtgcg catccggccg
     1081 tacacggctt gggcattttc gggtgggaga tcggcacgcc tgatgcgcac gtccaccacc
     1141 gcgataccat aggcagtggc tgcctcatgg ctacctaaag tcaccgcccg cataatcgca
     1201 tcccgttgag tggcgatcac ctcgaccaga tcgtgtaacc ccaactgctc ccggaccttc
     1261 gaatagataa tgtcatcgag gcgagcctgc gccccggcct cattctgcac cgtttgcaag
     1321 aacttgagcg ggtcgctgat ctgccacttg gcataattat cgaccaccag attcttcttg
     1381 tcgcgggtga tcaccggtgc gggagccgtg tcgtaatcga gcagacgatt ctcaaagaag
     1441 gtgagctgtt gcagaaaagg gactttcaaa tgtaggccgg gcgtcctcac cagacgcacc
     1501 ggacgaccga gctgggtcac aaccgcctgc tcagtctctg ccaccgagta gagtgtac
//
LOCUS       DASQSL010000318         1814 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_83822, whole genome shotgun sequence.
ACCESSION   DASQSL010000318 DASQSL010000000
VERSION     DASQSL010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1814)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1814)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1814
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83822"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..481)
                     /locus_tag="VE844_03185"
     CDS             complement(<1..481)
                     /locus_tag="VE844_03185"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012824719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HZC00387.1"
                     /translation="MDWMVYLKALLLGMLEGLTEFLPISSTGHLIIAEDLLGFTGERA
                     KSFAIFIQLGAILAVCWYYRPKIWNIGRRFPQDPAARGFILNLAVAFMPAAILGVMLR
                     HAIKQYLFHPLTVACALIAGGFIILLIERLAHQPHIQTVDDIRWQDALKVGCAQAFAL
                     "
     gene            571..1662
                     /gene="cax"
                     /locus_tag="VE844_03190"
     CDS             571..1662
                     /gene="cax"
                     /locus_tag="VE844_03190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012899323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015368 - calcium:monoatomic cation
                     antiporter activity [Evidence IEA];
                     GO_process: GO:0006816 - calcium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/proton exchanger"
                     /protein_id="HZC00388.1"
                     /translation="MSLLKRHPIGTYLLNSLIVFVPISIILEFLHGDPLWIFISSGLA
                     IIPLAGWMGKATEYLAEHLGEGIGGLLNATFGNAAELIIALFALWAGLHEVVKASITG
                     SIIGNILLVLGLSMVAGGIRFPIQQFNRTAASLGSSLLILSAIGLVVPAIFHYIVKAG
                     NVAVERGLSLEISVVLFVTYLLSLIFSLRTHRHLYVRAANIEYDEALGTQGWSKTKSV
                     GVLIASSILIASMAEFLVGSVEHASKALGMTEVFVGVILVAIVGNAAEHSTAVLVAMK
                     DKMDLALNIALGSSLQIALLIAPILVFASYALGHPMDLVFTPFEVFSVVLGVLAVSLV
                     VADGESNWMEGIQLLAVYVILGIAFYFLP"
BASE COUNT          402 a          457 c          496 g          459 t
ORIGIN      
        1 tcaaagcaaa ggcctgggca cagccgactt tcagggcatc ctgccagcgt atgtcatcga
       61 cagtttggat gtgaggttgg tgggccaggc gttcgatcaa taaaataata aaaccacctg
      121 caatcaaggc acaggctacg gtgaggggat gaaacaggta ttgcttgata gcgtggcgca
      181 gcatcactcc tagtatcgcc gcaggcataa aggccactgc tagattcaga ataaatcccc
      241 gcgctgccgg atcctgagga aaacggcggc ctatgttcca gatcttaggg cgatagtacc
      301 aacacaccgc caagatggcg cccagttgaa taaagatcgc aaaggattta gcccgctccc
      361 ctgtaaaccc cagtagatct tcggcgatga tgagatgacc ggtactggag ataggaagaa
      421 actctgtgag accttcaagc atgcccaaca acagggcttt gagataaacc atccagtcca
      481 tgtttatctt aagagcgccg agacaattgt aacgccggtg attatactgc tacggtttag
      541 tttttaagct taaaaataat aaatctgctt atgagcctcc taaagcgcca tcctatcggt
      601 acctatcttc tgaacagcct cattgtcttt gtgcctataa gcatcatctt ggagtttttg
      661 catggggatc ccttatggat cttcatcagc tcaggtcttg ccatcattcc cctggcaggc
      721 tggatgggca aagcgactga atatctcgcc gagcacttgg gcgagggcat cggcggcttg
      781 ctcaatgcca ccttcggcaa tgcggctgag cttatcatcg ctttattcgc tctctgggca
      841 gggcttcatg aggtcgtaaa ggcctcgatt acaggctcga tcatcgggaa tattctcctg
      901 gtactgggct tgagtatggt agccggcggg atcagatttc ccatccaaca attcaaccgc
      961 accgccgcga gccttggctc gagcctattg atattgagcg ccatcggcct ggtggtgccg
     1021 gccatctttc attatatagt aaaggccggg aatgtcgcgg tggagcgggg cttgagtctt
     1081 gagatctcgg tggtattgtt tgtcacttac ctcttgagcc tgatcttctc tttgcgtacc
     1141 caccggcatc tttatgtcag agcggcaaat atagaatatg atgaggcctt aggcacgcag
     1201 ggctggagta agactaaatc tgtcggcgtg ctgatcgctt cgtccatctt gattgcgagc
     1261 atggccgagt ttcttgtagg cagcgttgag catgcctcga aggcgctcgg tatgacggag
     1321 gtgtttgtcg gcgtgatcct ggtcgctatc gtcggcaatg ccgccgagca cagcacggcg
     1381 gtgctggtgg cgatgaagga caagatggat ttggcgctta atatcgctct cggctcaagc
     1441 ctccagatcg cgctcctgat agctccgata ctggtctttg cgagctacgc cttgggtcat
     1501 ccgatggatc tcgtgtttac gccctttgag gtcttctcgg tcgtgctcgg tgtgttggcg
     1561 gtcagtcttg tcgtcgcgga cggggaatcg aactggatgg aaggcatcca gttgctggca
     1621 gtttatgtta tcctcgggat cgccttttat tttcttcctt gatgaaaaga ttaacctcaa
     1681 ggcattcaaa gaaggcagga ctaccgccag gcagcctggt tcatatcggc gatattatcc
     1741 ccgaaaccct gcggatcacc ctgcttgagt acgatgagtc ccggatcgct gagcaagcga
     1801 tcggccgcca gctg
//
LOCUS       DASQSL010000319         1015 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_97582, whole genome shotgun sequence.
ACCESSION   DASQSL010000319 DASQSL010000000
VERSION     DASQSL010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97582"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..736)
                     /locus_tag="VE844_03195"
     CDS             complement(<1..736)
                     /locus_tag="VE844_03195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012851438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="low temperature requirement protein A"
                     /protein_id="HZC00389.1"
                     /translation="MHVSDNRGPLRTRNGGEQRVTPLELFFDLVYVFAVTQLSHRLLE
                     HLSVRGVLETLMLLLAVWGVWIYTTWFTNWFDPDSLAVRLVLIAVMLASLLMSVAIPE
                     AFGKRGLMFALAYVAIQVGRTAFTFIALRKSLGTSHPLSRTFQRILTWFVGSGVVWII
                     GGLLEGEARYALWLLALAVDYSGPVVGYYIPGLGRSRTGEWTIEGGHFAERCQLFVII
                     ALGESILVTGTTFGQIEASTATVSAFV"
BASE COUNT          234 a          325 c          281 g          175 t
ORIGIN      
        1 ccacaaaggc agacaccgta gccgtggaag cttcgatctg gccgaaggtc gtgccggtca
       61 ctaggatcga ctcccccaga gcgatgatga cgaacaactg gcagcgctcg gcgaagtgcc
      121 caccctcgat ggtccactct ccagtccggg aacgccctag acctggtatg tagtagccga
      181 ccacggggcc gctgtagtcc acagccagag cgagcagcca cagcgcgtag cgcgcctcgc
      241 cttcaagcag gccgccaatg atccaaacca cccctgatcc cacgaaccaa gtcagtatcc
      301 gctggaaggt cctgcttagc ggatgagagg tgcccaaaga ctttctcagg gcgatgaacg
      361 tgaacgcggt acgccccacc tggatggcca cgtaggctag ggcgaacatc agcccgcgct
      421 tgccgaaggc ttctggtatt gccaccgaca tgagcaggct ggcaagcatc actgcgatga
      481 gcaccaggcg caccgccaaa ctatcgggat cgaaccagtt ggtgaaccag gtcgtgtaaa
      541 tccacacccc ccacaccgcc agcaacagca ttaacgtctc cagcacgccc ctgacgctca
      601 ggtgctccag cagccggtgg gagagctgcg tcacagcgaa gacgtagacc agatcgaaga
      661 acagctccag gggcgtaacc cgctgctcac caccgttccg agttcgcagc ggacctctgt
      721 tatcggagac atgcatcgtc cacctcccgt ctttgctgcg gctgctccag cgcgttctgt
      781 cccatcatgc catgtgggga tcttcgaggc ttcggaggag gccccgaact tccgagactt
      841 catattggac gaacctcgga gaatcattct tccagacact tctgtgaata gaggtcagag
      901 gaagagcaaa agccgccaga tcctgcccct ctgtctgcgc gaggtatgcc tctttaggat
      961 ctttgcaaaa gatgggaggg agcaacttcc gagaactccg tcaacgcgaa gaccg
//
LOCUS       DASQSL010000320         1342 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_57416, whole genome shotgun sequence.
ACCESSION   DASQSL010000320 DASQSL010000000
VERSION     DASQSL010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1342
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57416"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(33..227)
                     /locus_tag="VE844_03200"
     CDS             complement(33..227)
                     /locus_tag="VE844_03200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00390.1"
                     /translation="MDNTQFTPRDRHGTRDHEQRTCLYCIDGWVLLGSITHDGEEIIE
                     SIRCRRCGDTGRSARTANFA"
     gene            418..606
                     /locus_tag="VE844_03205"
     CDS             418..606
                     /locus_tag="VE844_03205"
                     /inference="COORDINATES: protein motif:HMM:NF024252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZC00391.1"
                     /translation="MDKVKRLRKERVLTIRELADEAGVSKTTISNIENGQSEAYPSTI
                     RKLARALEVTPSELVHQD"
     gene            873..1154
                     /locus_tag="VE844_03210"
     CDS             873..1154
                     /locus_tag="VE844_03210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00392.1"
                     /translation="MSGYLELARRGRARREEYWHCPASEAVAGIQPVCHNLSIQLVPE
                     DRRLQSAGFELKERVGKIVWERPDTGFWESQEMALHPLKRESTEEGRRA"
     gene            1151..>1342
                     /locus_tag="VE844_03215"
     CDS             1151..>1342
                     /locus_tag="VE844_03215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00393.1"
                     /translation="MKRGGPTTEKGKAIVRWNATRHGISSPAPVVPGLEKREDWQEHR
                     DGILDNLSPVGHLEFNLAER"
BASE COUNT          308 a          383 c          390 g          261 t
ORIGIN      
        1 ccccccgaag aggctacttc cgcgaacttt gtctaggcga agtttgcggt tcgtgccgag
       61 cgccccgtgt cgccgcagcg ccggcagcga atggactcga tgatctcctc gccgtcgtga
      121 gtgatgctgc cgaggagcac ccatccgtcg atgcagtaga ggcaggtacg ctgctcgtgg
      181 tcccgggtcc catgccgatc gcgtggggta aactgcgtgt tgtccacagt gagcatcctt
      241 ccctgtgggc cggtcccggg ctgctaccaa cagtgccggg atcatctctt tatctgactc
      301 ccatattgta ccatttttgt acatctatgt ccagttgagt acctagtgtg tccgataaga
      361 taccatatac tggctgctga tgtacgggac ctgtacaagg tagtcatgga ggtgaacgtg
      421 gataaggtca agcgcttacg caaagagcgc gtgctaacga tcagggagct ggccgacgaa
      481 gccggggtct ccaagaccac gatcagcaac atcgagaacg gacagagcga agcctaccct
      541 tctacgatca ggaagctcgc acgagccctc gaggttacac cctccgagct agtacaccag
      601 gactagaacc tccctttcca gcaagtatgt accgtaatag taaggggtcg gtttttagga
      661 cttgctacac cttataggcg tatgagaagc tttgtttatg tgaaattgac gatctggcac
      721 cgctcggcgc ctctcttgta aagataaacg ccgaacggct gcatccggga ccatcacccc
      781 cgtatgaagc acgagccacc accggactca gacgaatgtt tcgtctcttt cacttgtttt
      841 gcaacccaac gtcaaagaaa aggagccacg acatgagcgg ttatctagaa ctcgctaggc
      901 gaggtcgggc tagacgggaa gagtactggc actgccccgc tagcgaagcc gtcgcgggca
      961 tacagcctgt gtgccacaac ctatctatcc agcttgtccc cgaggaccgc aggctgcaat
     1021 ctgccggctt cgagcttaaa gagcgcgtcg ggaagatcgt ctgggagagg ccggacacag
     1081 gcttctggga atcccaggag atggcgctgc accccttgaa gagggagagc acggaggaag
     1141 ggcggagggc atgaaaagag gcggtcccac taccgagaag ggcaaggcta ttgtgagatg
     1201 gaacgctacc cgccacggca taagctcccc cgccccggtc gtccccggcc tggaaaaaag
     1261 ggaggactgg caggagcaca gggacggcat cctcgacaac ctctccccgg taggacacct
     1321 ggaattcaac cttgcagagc gc
//
LOCUS       DASQSL010000321         2074 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_2624, whole genome shotgun sequence.
ACCESSION   DASQSL010000321 DASQSL010000000
VERSION     DASQSL010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2074
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2624"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..647
                     /locus_tag="VE844_03220"
     CDS             <1..647
                     /locus_tag="VE844_03220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011766859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HZC00394.1"
                     /translation="LGQALDFLEQTAREFLPSTARTDLDGQSREFRESSATLYAAFAL
                     ALIFIYLVLAAQFESFIDPFIILLTVPLAVTGALLSLSLTGGTLNVYSQIGLVMLVGL
                     ITKNGILIVEFANQLRDRGNDVYQAVSEAAGLRLRPILMTILAMILGALPLALATGAG
                     AESREPIGWVIVGGLALGTLLTLFVIPTAYSLLARPIAADREVWTEAVESTTQP"
     gene            790..>2074
                     /locus_tag="VE844_03225"
     CDS             790..>2074
                     /locus_tag="VE844_03225"
                     /inference="COORDINATES: protein motif:HMM:NF025180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC00395.1"
                     /translation="MSKPSLRPTREARKQHKLKRRAAQRQLCARRAEVGRSPPRATSV
                     SNRLCSYSTEAEEQAVREEAVAGQLGVFQTLLPKLLKELSKIPDPRQPKKVKHKLTVV
                     LLYGLLSFVLQMASRREANRELSRPAFLATLQALFPELESLPHADTLHRLLQVIEVQA
                     LEETHVELLRRWIRNKKFRRYLISQCYPIAIDGTQKLVRNGQWQAEQWLERRRQRAEG
                     EHVQQYVYVLEANLVFYNGVTLPLLSEFLNYAEGDPDDHKQDCELKAFYRLTARLKAY
                     FPRLPILLLLDGLYPNGPLMAVCHQYGWQFMIVLPAKCLPSVWEEVEALKPRLPHHRK
                     HQHWRGRQQQFWWVNDIIYSYEGDRKSLRVHGVGCEETWQEVDPESGELIDKQTQHVW
                     LSSQRLDPYNVHERCNLGARQRWGIETSLLVEKCQG"
BASE COUNT          422 a          598 c          630 g          424 t
ORIGIN      
        1 gccttggaca agcgctcgat ttcctcgagc aaaccgcccg cgaattcttg ccctcgaccg
       61 ctcgcaccga tctcgacggc cagtcgcgtg agttccggga atcgagcgct accctgtacg
      121 ccgccttcgc cctcgccctg atcttcattt atttggtcct ggcggcccag ttcgagagct
      181 ttatcgatcc ctttattatt ctcttgactg taccgctggc cgtgaccggg gcgcttttgt
      241 ccctctcact gaccggtggg accctcaatg tctatagcca gatcggcttg gtgatgctgg
      301 tcggcctcat taccaagaac ggcatcctga tcgtcgagtt cgccaatcag ttgcgggatc
      361 ggggcaacga tgtctatcaa gcggtaagtg aggcggcagg cttacgcctg cggccgatcc
      421 tgatgactat cttggcgatg atcttaggcg ccttaccgct tgcgctcgct accggtgccg
      481 gggccgagag ccgtgagcct atcggttggg tgatcgtagg cggattggcc ctgggcacgc
      541 tgcttacctt atttgtgatc ccgaccgcct atagtctgct ggcgcgcccc atcgccgctg
      601 acagggaggt ctggacagag gcggtagaat caacgactca gccctgacgc acgttctggg
      661 agcgtcatgg aaaacagaca gttagcgata agcgaaaaaa atttcgtcgc acaaatgtga
      721 ggcattagcg cgcgaattgt ggcagattct ccccctcaac ccaccacggt cagaagggga
      781 ggatctacca tgagcaagcc gagcctgcgg ccgacccgag aagcccgcaa gcagcataag
      841 ctaaagcggc gcgctgcgca acgccagtta tgcgcccgcc gagccgaggt ggggcgctcg
      901 ccgccgcggg cgacgagcgt ctcgaaccgg ttatgttctt actcgactga ggctgaagaa
      961 caagcggtgc gggaagaagc cgtagcgggc cagttggggg tatttcagac gttgttaccg
     1021 aagctattga aggagttgag caagatcccg gatccccggc agccgaagaa ggtcaagcac
     1081 aagttgacgg tggtgttgct ctatgggctg ctcagctttg tgttgcagat ggcctcgcgg
     1141 cgcgaggcca accgggagtt gagccgcccg gcgtttctgg ccaccttgca ggccttgttt
     1201 ccagagctgg aatcgctacc gcatgccgac acgctacatc ggctgttgca ggtgatcgag
     1261 gtccaggcct tggaagagac gcatgtggag ttgctgcggc gctggatccg caacaagaaa
     1321 ttccgtcgct acttgatcag ccagtgctac ccgattgcca tcgatgggac gcagaagctg
     1381 gtacgcaacg gtcaatggca ggctgagcaa tggttagaac gtcgccgcca gagggccgag
     1441 ggcgagcacg tccagcagta tgtctatgtg ctggaagcga atctggtgtt ttataatggg
     1501 gtgacgctgc cgctgctgag cgaatttctc aactacgctg aaggtgatcc agacgatcac
     1561 aaacaagact gtgagttgaa agccttctac cgcctgacgg cacgactcaa agcctacttt
     1621 ccacgcctgc cgatcctgct gctgctcgat gggctctatc ccaacggccc cttgatggcg
     1681 gtatgccatc aatacggctg gcagtttatg attgtcttgc ccgctaagtg tttgccctcg
     1741 gtgtgggagg aggtcgaagc gctcaagccg cgcctgcccc accaccgtaa acaccagcac
     1801 tggcgcgggc gtcagcaaca gttctggtgg gtcaacgaca tcatttatag ctatgagggg
     1861 gaccgcaaaa gcctccgggt gcatggagtc ggctgtgaag aaacctggca agaggtcgac
     1921 cctgagagtg gcgagctgat cgataagcag acccagcacg tgtggctatc cagccagcgc
     1981 ctggacccct acaacgtcca cgagcgctgc aaccttggcg cccgtcaacg ctgggggatc
     2041 gagaccagcc tcctggtcga aaagtgccag ggct
//
LOCUS       DASQSL010000322         1843 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_71151, whole genome shotgun sequence.
ACCESSION   DASQSL010000322 DASQSL010000000
VERSION     DASQSL010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71151"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1843
                     /locus_tag="VE844_03230"
     CDS             <1..>1843
                     /locus_tag="VE844_03230"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017485217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HZC00396.1"
                     /translation="RDGNPFVTNEVTREALLANRRASLNRYRMRLEHLVRSLSIARHA
                     VEAPEIFLKALEETLARAPGGKAIAARNPGEVFRQFTACMLAKLEGTLAERPPAPGLE
                     DWVYRSADELIHDLQTLEQGLREARCLALGKAMVEPLRREVEVFRFRTVRLDLRENTT
                     VTNHTLMALWRQRTGESPTASPPPDLCSQEWKQWLLSELARPLEGLPAFTDLDPQAES
                     TLGMFRLVREVRKEVDREAFGSFILSMSRSVADVLGIYLLAKYAGLFMDPEGVESCTL
                     PVVPLFETIEDLEHAPAILRELLETPLVRRSLRDLGGVQEVMIGYSDPNKDGGFLTSN
                     WELNKAQARLARVGEEGGIPIAFFHGRGGSVSRGGVPTGRAIAAQPAGSVHGQMRITE
                     QGEVVSLKYANPGTAQYHMELLAASIFEHTLKSEREPELQPNPEFNEALEALSGAAYA
                     AYRRLVEHPGLMQYYQAASPVEELVLLNIGSRPARRFGAKSFSDLRAIPWVVAWTQNR
                     HMVPGWYGVGSGLESFIKVRGKAGEQLLKQMFHKSRLFRLIIDEVEKTLPQVDLAIAR
                     EYAALVPETTIRDEIFTMIEEEYHRTVTMVLCVSGSQELCERFPRHRR"
BASE COUNT          356 a          537 c          581 g          369 t
ORIGIN      
        1 accgcgatgg taatcccttc gtcaccaatg aagtcacgcg ggaagcatta ctagccaatc
       61 gccgcgccag tctcaaccgc taccggatgc ggctagaaca cttggtccgg agcttgagca
      121 tcgcccggca tgcggtagag gctccggaga tcttcctcaa ggcactggag gaaaccttgg
      181 cccgggcgcc tggtggcaag gcgattgctg cccgcaatcc gggtgaggta ttccggcagt
      241 tcacggcgtg tatgctggcc aagctcgagg gcacgcttgc tgaaagaccg ccggcgcccg
      301 gattagagga ttgggtctac cgcagcgccg atgagctcat ccatgatctc caaacgctgg
      361 agcagggctt gcgtgaggcg cgctgtctcg cgcttggcaa ggcgatggtc gagccgctcc
      421 ggcgcgaggt cgaggtcttc cgctttcgaa cagtgcggct ggatctacgc gaaaatacga
      481 cggttaccaa tcataccttg atggcgctgt ggcgccagag gaccggtgaa tcccccactg
      541 ccagcccccc gcccgatcta tgctcacagg aatggaaaca atggctactc agtgagctag
      601 cacgcccgct cgagggtctc ccggcgttta ccgatctgga cccccaggcc gaatctacgc
      661 taggtatgtt ccggctggtc cgcgaggtcc gcaaggaggt cgatcgcgag gcctttggca
      721 gttttattct aagcatgagc cgatcggtcg ctgatgtgct tgggatctat ctcctcgcca
      781 aatacgcggg gctttttatg gatcccgaag gtgtcgagag ttgtaccttg ccagtggtgc
      841 ccctgtttga aaccattgag gacctcgagc atgccccggc gatcctacgg gaactcttgg
      901 agacgcctct cgtgcgccga tcgcttcggg atctcggcgg ggtccaggag gtcatgatcg
      961 gttactcaga tcccaacaaa gacggcggtt ttctgacctc gaactgggaa ttgaacaagg
     1021 ctcaggcgag gctggcccgg gtgggggagg agggcgggat cccgatcgcg ttcttccatg
     1081 gccggggcgg ctcggtgagc cgtggcgggg tgccgaccgg gcgcgccatc gcggcgcagc
     1141 cggccggttc tgtccatgga cagatgcgga tcaccgagca gggcgaggta gtgtcgctga
     1201 aatacgccaa tcccggcacc gcccaatatc atatggaatt gcttgcggcc agcatcttcg
     1261 agcatacctt gaaatccgag cgggagcccg agctgcaacc caatccggaa tttaacgagg
     1321 ccctggaagc gctctctgga gccgcttatg cagcctaccg gcggttagtt gagcacccag
     1381 gcttgatgca gtactaccag gcggcgagcc ccgtggaaga actggtattg ctcaatatcg
     1441 gctcacgtcc cgcccgccgc ttcggggcga agtcgttcag tgatctccgg gccatccctt
     1501 gggtcgttgc ctggacccag aatcgccaca tggtgccggg ctggtatggt gtaggcagtg
     1561 ggctcgaaag ttttatcaag gtccggggca aggcgggtga acaactgctc aagcagatgt
     1621 tccataaatc gcgcctgttc cgtctcatca tcgatgaggt ggagaagacc ttgcctcagg
     1681 tggatctcgc catcgcccgc gaatatgcgg cgctcgtccc cgagaccacg atccgtgatg
     1741 agatcttcac gatgatcgag gaggaatacc accgcacagt aactatggtg ctgtgcgtga
     1801 gcggtagcca agaattatgt gagcgctttc cgcgtcatcg ccg
//
LOCUS       DASQSL010000323         1156 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_28795, whole genome shotgun sequence.
ACCESSION   DASQSL010000323 DASQSL010000000
VERSION     DASQSL010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1156
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28795"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            230..>1156
                     /gene="ribB"
                     /locus_tag="VE844_03235"
     CDS             230..>1156
                     /gene="ribB"
                     /locus_tag="VE844_03235"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002684644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HZC00397.1"
                     /translation="MSLNSTEELIEAIREGKMIILMDDEDRENEGDFVMAASCVRSED
                     INFMARYGRGLICLTLTKQRCARLNLPLMVRDTYYTQRTNFTLSIDAARGITTGISAA
                     DRALTVRTAVAPEANPSDLAQPGHIFPLMAQPGGVLTRAGHTEAGCDLARLAGLEPAA
                     VIVEILNEDGTMARCPELEVLAREQDLKIGTIADLIRFRIEHEKTVERVAECSLPTEF
                     GEFHLVAFQDTIDNNLHLALVKGEILPEEPALVRVHVQNPLCDLTASRQSDCGWPLRD
                     ALQRVSKEGRGVVVILGNQIETADLIAQIKSSN"
BASE COUNT          266 a          317 c          329 g          244 t
ORIGIN      
        1 gaacacggca cgggtacgcg gtgttgtttt taccgctgtg aaatgtaaga tctaggaggc
       61 agacaggaca ggaatgacgg tatttataat ggtattctct ctttccttca tgcataacat
      121 gctatcaaaa caagcattta ttcgtttagt aaatgtaatc gctcgatctt gaacggctgc
      181 tttacagtga cagagaagca atgtttacgg ctggcacgag gtaaccggca tgtctcttaa
      241 ctctacagaa gagctgatcg aggcgatccg agagggcaag atgatcatcc tgatggatga
      301 tgaagaccgg gaaaacgagg gtgactttgt catggcggcc agttgcgtgc gctcggagga
      361 tattaatttc atggcgcgct acggacgcgg cctgatctgc ctgacactca ccaagcaacg
      421 ctgcgctcgg ctcaacctac ccctcatggt gcgtgacacc tattacaccc agcgcaccaa
      481 ttttaccctc tcaatcgatg ccgcgcgcgg gatcaccacc ggtatctcgg ccgccgaccg
      541 cgcactcact gtccgcaccg cggtcgcacc ggaggcaaat ccttcagatc tggcccaacc
      601 ggggcacatc ttcccgttga tggcccaacc gggaggagtg ctcacccgcg ccggacacac
      661 cgaggcgggc tgcgatctgg cgcggctggc aggacttgaa cccgccgctg tgatcgtcga
      721 gatcctcaat gaagatggga ccatggccag gtgccctgaa cttgaggttt tagctagaga
      781 gcaggatctc aagatcggca ccatcgccga tctgatccgg ttccgcatcg agcatgaaaa
      841 gaccgtggaa cgggtcgccg agtgcagcct ccccacagag tttggcgagt tccacctggt
      901 ggcctttcaa gatactatcg acaataatct gcacttggcc ctggtgaagg gggagatcct
      961 tcctgaggaa ccggcactgg tgcgtgtgca tgtacaaaat ccgctctgtg atctcacagc
     1021 gagccggcag agcgattgcg gctggccgct acgtgatgcc ttgcagcggg tatcgaaaga
     1081 gggccgaggg gtggtcgtga tcctgggtaa tcagattgaa accgccgatc ttatcgccca
     1141 gatcaagagc tcaaac
//
LOCUS       DASQSL010000324         1383 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_16807, whole genome shotgun sequence.
ACCESSION   DASQSL010000324 DASQSL010000000
VERSION     DASQSL010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1383
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16807"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            187..477
                     /locus_tag="VE844_03240"
     CDS             187..477
                     /locus_tag="VE844_03240"
                     /inference="COORDINATES: protein motif:HMM:NF024169.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HZC00398.1"
                     /translation="MITQVLHCPYCDETDIVRHGKSPEGKQRYRCRQCLEGRGRTFLL
                     EYAYAGQSPAIKQQIVDMALNASGIRDTARVLHVSPTTVIKELKKRNLHSSK"
     gene            474..959
                     /locus_tag="VE844_03245"
     CDS             474..959
                     /locus_tag="VE844_03245"
                     /inference="COORDINATES: protein motif:HMM:NF015365.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HZC00399.1"
                     /translation="MNQAVLRHLHPEHVEVEICRADELAQRRGVASELDEMWAYVAKK
                     TNPRWLWHAIDHYSGKVLAYVFGRRKDTVFLELQGLLAPFGITRFYTDGWGTYERHLT
                     PEQHVVGKQHTQKIESKHINLRTRIKRLVRRTICFSKTTPMHDLVVGLFINRYEFGRP
                     I"
     gene            complement(1059..>1383)
                     /locus_tag="VE844_03250"
     CDS             complement(1059..>1383)
                     /locus_tag="VE844_03250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012427352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1269 domain-containing protein"
                     /protein_id="HZC00400.1"
                     /translation="AWGALWGTLLGLLFLNPLAGLLTGAALGAGAGALSGALSDYGID
                     DEFIRSLGATLAPGSSALFVLVRSATMDKVLPELRPFGGTVLRTSLSNEQEARLRQAL
                     QDAQA"
BASE COUNT          312 a          406 c          402 g          263 t
ORIGIN      
        1 cgctcaattt atcgaggttt gtagcaggtc gaagcggtcg aagcatttga cgaaatctcc
       61 ccttctggct ttgccagcaa cggaggggtc tcatgctgcc cgcaagatca tcgaaggtgt
      121 ttcagagctg tggatatgct accctctcat cgatgaagag acatcccaat cggagtgagg
      181 ggagcaatga ttacgcaagt gctgcactgt ccctactgcg acgagaccga tatcgtccgg
      241 catggcaagt cacctgaggg caagcaacgc tatcgctgcc ggcaatgcct tgaggggcgc
      301 gggcgcacgt ttctcctgga atatgcctac gccggtcagt cgcctgccat caagcaacaa
      361 atcgtggata tggccctgaa tgcgagcggc attcgcgata ccgcgcgggt gttgcacgtc
      421 agccccacga cagtcattaa agaactcaaa aaaaggaacc tgcactcgag caagtgaatc
      481 aggcagtgtt gcggcacctc cacccagagc acgtggaggt cgagatctgt cgcgctgacg
      541 agctggcaca gcgccgcgga gtggcgtcag aactcgatga aatgtgggcg tatgtggcca
      601 agaaaacgaa tccgcgctgg ctctggcatg cgattgatca ttacagtggg aaggtgttgg
      661 cctatgtgtt tggacggcgg aaggataccg tctttcttga actccagggc ctattggcgc
      721 cttttggtat cacacggttt tacacggatg ggtggggtac ctacgagcgg catctcacgc
      781 ctgagcagca cgtggtaggc aagcagcata cccagaaaat tgagagcaag cacatcaatc
      841 tgcggacccg cattaagcga cttgtacgcc gcacaatttg cttctccaaa acgacaccca
      901 tgcacgatct ggtcgtgggc ctctttatca atcgctacga gtttgggcga cccatctgac
      961 atggaatcaa cagctctgaa acaccttcct taatgccatt cggccaagag ccaccatatg
     1021 tccacgtctc tgcatcacca catgcctgca ctgttcgtct aggcctgcgc gtcctggagt
     1081 gcctgcctca ggcgcgcctc ctgctcgttc gagagcgagg ttctcaacac cgttccccca
     1141 aacggacgca gctcgggcaa gaccttgtcc atcgtcgcgc tgcggacgag gacaaacagg
     1201 gcggaagagc ccggcgcaag cgtcgcgccc agcgaccgga tgaactcgtc gtcaatcccg
     1261 taatccgaga gcgcacccga gagggcgccg gctccggcgc caagggccgc gccggtcagc
     1321 aggccagcca gggggttgag aaacagcagg ccgaggagcg tgccccacaa ggcgccccag
     1381 gcc
//
LOCUS       DASQSL010000325         1098 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_16821, whole genome shotgun sequence.
ACCESSION   DASQSL010000325 DASQSL010000000
VERSION     DASQSL010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16821"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(147..776)
                     /locus_tag="VE844_03255"
     CDS             complement(147..776)
                     /locus_tag="VE844_03255"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011565839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HZC00401.1"
                     /translation="MAYELPNLPYGYDALEPVIDEETMHLHHEKHHNTYVTNLDAALE
                     KHPEADPGNVEELLANIESVPDDIRTAVRNNGGGHSNHSMFWQIMGPSGQGGGEPSGD
                     LAQAIDSSFGSFDSFKESFGAAAAPGALFGSGWCWLIANPDGSLSIETTPNQDSPLME
                     GKTPVIGLDVWEHAYYLKYQNRRPEYIGAWWEVVNWDEAERRYQAARSA"
     gene            complement(947..1098)
                     /locus_tag="VE844_03260"
                     /pseudo
     CDS             complement(947..1098)
                     /locus_tag="VE844_03260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006921730.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="luciferase family protein"
BASE COUNT          190 a          338 c          308 g          262 t
ORIGIN      
        1 ctaccacccc agtctacaga ctttgccccg actgcgaagt aggctctgtc acgccagcca
       61 cgcaacccgg cgcaagaaga agcccccggg agtgcagtcc gggggctttc actctcactt
      121 gcgcgtgcta ttgagatctt actctgctag gcgctccttg ctgcctggta gcgcctctcg
      181 gcctcatccc agtttacgac ctcccaccag gcacctatgt actcaggtcg gcggttctgg
      241 tacttcaggt agtaagcgtg ctcccacaca tccaacccta taactggcgt cttgccctcc
      301 atgagtggtg agtcctggtt cggggtggtc tctatagaga gcgagccatc cgggtttgct
      361 atgagccagc accacccact tccaaagagc gccccaggtg ctgctgctgc cccaaagctc
      421 tctttgaagg agtcaaacga tccgaacgag gagtctatgg cttgtgccag atctcccgac
      481 ggctctcccc ctccctgacc gctcgggccc atgatctgcc agaacatgga gtggtttgag
      541 tgtccaccac cgttgttcct caccgcggtg cggatatcgt ctgggacgga ttctatgttt
      601 gcgagcaact cttcgacgtt gccggggtca gcctcgggat gcttctccag agcggcatcg
      661 agattggtca cataggtgtt gtggtgcttc tcgtgatgga ggtgcatggt ctcttcgtct
      721 atgaccggct ccagggcgtc gtagccatag ggaaggttgg gaagttcgta agccattgct
      781 cgttcctttc tcagtgatcg gtgatggtcg ctgcgttctt ctttggttct atccctagaa
      841 gatcatctcc cggtagaccc gggcgccgtt cggcgcgggc ctgcgcgcgt tcgtagttca
      901 tgcggaagag ctcgatcacg gcttccgcgt caccgggacc atccatcttc cggcgcaccc
      961 agcccgagtc gggcagcggc ggatgcaccg aagcctgtcc ttccgctatc agttcgttac
     1021 gtattttctt gggaaagggc aggtcagcga agctcgagcc atgcagatgc ccgagctcca
     1081 ctttaccgta attgagct
//
LOCUS       DASQSL010000326         3293 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_2699, whole genome shotgun sequence.
ACCESSION   DASQSL010000326 DASQSL010000000
VERSION     DASQSL010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3293
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2699"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..917)
                     /locus_tag="VE844_03265"
     CDS             complement(<1..917)
                     /locus_tag="VE844_03265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015830490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HZC00402.1"
                     /translation="MPKRTDIEGILLIGAGPIVIGQACEFDYSGAQACKALREEGYRV
                     ILVNSNPATIMTDPEMADATYIEPVHWQSVARIIARERPDALLPTMGGQTALNCALDL
                     ARQGVLTDYGVELIGASQEAIDKAEDRERFREAMQRIGLKTPHSVIAHSLEEAQQVQA
                     RIGSPVIIRPSFTLGGTGGGVAYNREEFLEICERGLEASPTHEILLEESVLGWKEYEM
                     EVVRDRKDNCIIVCSIENLDPMGIHTGDSITVAPVQTLTDKEYQQMRNAAIAVLREIG
                     VDTGGSNVQFAVHPDNGEMVVIEMNPRVSR"
     gene            complement(953..2104)
                     /gene="carA"
                     /locus_tag="VE844_03270"
     CDS             complement(953..2104)
                     /gene="carA"
                     /locus_tag="VE844_03270"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008733137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005951 - carbamoyl-phosphate synthase
                     complex [Evidence IEA];
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HZC00403.1"
                     /translation="MNQPALLALEDGSVFHGASIGVAGQCSGEVVFNTAMTGYQEILT
                     DPSYFQQIVTLTYPHIGNVGTNSEDEESTRVYASGLVIRDLPPRPSSWRAKETVEDYL
                     QRHKVVGIAGIDTRRLTHILREKGAQRGCIMVAESLDAATAIGAARAFPGLEGADLAT
                     AVTTPRPYTWNKGSVHWQGGAPQRESRITTQPVWKVVAYDFGVKGNILRLLVDRGCEL
                     TVVPAQTPAAQVLSSKPDGIFLSNGPGDPGACDYAITAIGEMVNAGVPVFGICLGHQL
                     LALACGGRTVKMKFGHHGANHPVQDLATKKVLITSQNHGFAVDPESLPKTLRITHRSL
                     FDSSVQGIHHTQRPAFGFQGHPEASPGPHDVRSLFEHFIELMASSKSLN"
     gene            complement(2249..3210)
                     /locus_tag="VE844_03275"
                     /pseudo
     CDS             complement(2249..3210)
                     /locus_tag="VE844_03275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011633282.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
BASE COUNT          750 a         1051 c          798 g          694 t
ORIGIN      
        1 cgtgacaccc gtggattcat ctcgatgacc accatctccc cattatcggg atggacggca
       61 aactggacat tcgagccccc cgtatcgaca ccgatctccc ggagcacagc aatagccgca
      121 ttgcgcatct gctgatattc cttatcggtg agcgtctgga ccggcgccac cgtgatcgaa
      181 tccccggtat ggatccccat cggatcgaga ttctcgatcg agcagacgat gatgcaatta
      241 tccttgcgat cgcgcacgac ctccatctcg tattctttcc accccagcac cgactcttcc
      301 aataggatct catgggtagg cgaggcctct aacccgcgct cgcagatctc cagaaactct
      361 tcgcggttgt atgccacacc gcctcccgta cctccaagcg taaatgaggg acggataatc
      421 accggggatc cgatccgtgc ctggacctgc tgggcctcct ccaagctatg cgcaatcacc
      481 gaatggggcg tcttaagtcc aatacgctgc atagcctcgc ggaatcgctc gcgatcctcg
      541 gccttatcga tcgcctcctg tgaggcccca atcagttcta cgccatagtc ggtgagcaca
      601 ccctggcggg caagatccaa ggcgcaattg agcgccgtct gtccacccat agttggcaac
      661 agggcatctg gacgctcacg cgcgatgatc cgggccacgc tctgccagtg cacgggttcg
      721 atataggtgg catcggccat ctccggatct gtcatgatcg tcgccggatt ggaattgacc
      781 aggatcacgc ggtagccttc ttcacgcaag gccttacagg cctgggcccc agaatagtca
      841 aactcacagg cttggccgat cacgatggga cctgctccaa tgaggaggat accctcaata
      901 tcagtgcgtt tgggcataag gcggaagact taggttaacc aagctccatg attcagttta
      961 agcttttgct gcttgccatc agctcgatga aatgctcgaa cagagatcgc acatcgtgag
     1021 gacccgggct tgcctctgga tgaccctgga atccaaaagc aggcctttgg gtatggtgta
     1081 tcccttgtac gctactgtca aagagcgagc ggtgtgttat ccgcaaggtc ttgggcaaac
     1141 tctccggatc cacagcaaat ccatgatttt gactcgtgat caggaccttt ttggtagcca
     1201 gatcctgcac cggatgatta gcgccatgat gaccgaattt catcttgaca gtacgtccac
     1261 cacaggctag ggccaacaat tgatgcccaa gacagatccc aaacaccggg acaccggcat
     1321 tcaccatctc gccaatggcg gtaatggcat agtcacaggc cccagggtcc cccggaccgt
     1381 tcgatagaaa tatcccatcg ggcttgcttg acaagacctg agcagcaggg gtctgcgccg
     1441 gcactaccgt cagctcacag ccgcggtcga ctaagaggcg caggatattg cctttgacac
     1501 caaagtcata ggccactacc ttccacaccg gctgagtcgt tatccgagac tcgcgctgag
     1561 gagcacctcc ctgccaatgc acactgccct tattccaggt gtaaggcctc ggggtagtca
     1621 ccgctgttgc gagatccgca ccttcaagcc ctggaaatgc gcgtgcagcg cctatcgcgg
     1681 tcgctgcatc gaggctctca gccaccataa tacaacctct ttgcgcacct ttttcccgca
     1741 ggatatgggt cagacgacgg gtatcaatcc cggcgatccc aacgacctta tggcgttgta
     1801 gataatcctc caccgtctct tttgcccgcc aactgctcgg tcttggaggt agatcgcgga
     1861 tcaccagacc gctggcataa acgcgagtgg actcctcatc ctcgctattg gtacccacat
     1921 tgcctatatg tggataggtg agggtaacga tttgttgaaa atacgaagga tcggtgagta
     1981 tctcttggta gccggtcatg gcggtattga acactacctc gccgctacac tgaccggcca
     2041 caccgatcga cgcaccgtga aatacgctac catcttccaa agccaaaagg gcaggttgat
     2101 tcaaaacctt cctccgttaa cgaataggcc tataaaacca ctatccccct cgtggggtaa
     2161 tacccctcga aaaatcgctt gaccccatcc agcagggccc cgggtttcgc ttcgctgcag
     2221 ccgagctacg cctgctgaat cctgcgacct atgcctcgaa aacatccgct aaaacctgca
     2281 ctgtcaacac ccgctccccc caaagcaata atgtctccgc atccgccgcc tggatccgtt
     2341 gccgcacggt ttcatccagg gcaccaaaac ggcgctccag cagccgcaac actatcgccg
     2401 cttcgccttg ctgcaatcct tcctgaatac cctcctgcag cccctgccgc ttccactctt
     2461 cggcccactc tttaacgcgc tctgctaaca tagcatctac ctcttgcaaa tcctgtagtt
     2521 cgtcaaacac catgcctggc acacgtccag gcaaaaatac ccgcttcagc cacaccgtaa
     2581 acgcccgccg caggtgcctt tgctcggggg cctcaagcca gtcaatcaac gcccgtagca
     2641 cccgctgtac atccgctggt gtccggctgt tctccagccg aaacagagcc gccgcaagat
     2701 tccgtaatgg cgccaggtcg tcctcggtaa accgcccttc atccaggaga aaataccgga
     2761 gacagggacg atagcgctcc aaaccccccg gtaccgtcgc aacgagttcg gccacctctt
     2821 cgggggcctg ccagcgcctg acgccattgt acaataccag cggcaacacc gggggtagct
     2881 ggccagaagc cgtgagctgc ccgctgcgga tcaaatcttg gtaaagcaag cccacatagc
     2941 tcaagatccg caccgccatg aaccgatcca ccgtcgattg aaactcgaga agcagataga
     3001 catacagcca gtcctgcccc catcgaaccc gccagatcac atctcgtcct cgtggctgcg
     3061 caagtcatcg gctacatagc tgctgttcat cttttcaagg ctggtgaaat ccagtgcctt
     3121 gacccagtct tcgtagacaa aactacggag cagatcagcc accagctcag catgggaaaa
     3181 taatagtttg taactctggt catgttccat aggaacagtg taacccaagc catagattta
     3241 tgttgttggg gttcgcattg ctcatcccca acctacacac gcgctggtga ttg
//
LOCUS       DASQSL010000327         1242 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_139838, whole genome shotgun sequence.
ACCESSION   DASQSL010000327 DASQSL010000000
VERSION     DASQSL010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1242
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139838"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..519)
                     /locus_tag="VE844_03280"
     CDS             complement(<1..519)
                     /locus_tag="VE844_03280"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vWA domain-containing protein"
                     /protein_id="HZC00404.1"
                     /translation="MILVLDNSATMKRVDAKGLVRLAVGGFVERLKGDVRVAIVLFDH
                     SATVSVPLTAVTDESRLEFLEALQKLNYRGQYPDIVIALEQAIRELEVNGRGGAEKSI
                     ILVTGGLLDPSDTALVQSRLRALGYEVGTIDGTMGLKTRGAIRQFQRQVGMPADGKLN
                     KTLLVRLEEAYAA"
     gene            complement(591..911)
                     /locus_tag="VE844_03285"
     CDS             complement(591..911)
                     /locus_tag="VE844_03285"
                     /inference="COORDINATES: protein motif:HMM:NF016270.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HZC00405.1"
                     /translation="MYGGIKIFIAAFQTKPEGVERVVLIDFPSPQMKTIGFVTRILID
                     EASGQELAVVYVPTAPNPTSGYIEIVPVAEVISTDWTLDEAMQFVITAGTTAPNTITF
                     LKPE"
     gene            complement(839..>1242)
                     /locus_tag="VE844_03290"
     CDS             complement(839..>1242)
                     /locus_tag="VE844_03290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HZC00406.1"
                     /translation="KLGIRNAQKNILAGALVLTPLLATWLVAELLFNTLSRLGRPGAS
                     TFFTAIYRFSPELAEGLSTPWVEYVIAVVLTLVMLYFLGWATTRVLGRRILGWFEALL
                     ERIPLVRRSMVASRYSLRRSKPSPRVLSGSS"
BASE COUNT          289 a          368 c          324 g          261 t
ORIGIN      
        1 tgctgcatag gcctcttcta aacggacaag gagggtcttg tttagctttc catcggccgg
       61 catccccacc tgcctctgaa actggcgtat agcacccctt gtttttagcc ccatagtccc
      121 gtcgatcgta cccacctcgt aacctagggc gcgcaggcgc gattgcacga gcgccgtgtc
      181 acttgggtcc agaaggccac cggtcactag aatgatcgac ttctccgccc ctcctcgacc
      241 gttgacctca agctcacgga tggcctgttc cagggctatc acgatatccg gatactggcc
      301 gcggtaattg agtttttgaa gggcttcgag aaactctagt cgggactcgt ccgtgaccgc
      361 ggtgagcggg acagagacag tagcagagtg atcaaagagg actatcgcta cccgcacatc
      421 gcccttaagc ctctcaacga acccaccgac cgctaagcgg accagtccct ttgcatccac
      481 cctcttcatg gttgcagagt tatccaggac caggatcatg tccctctcct tggcccaggc
      541 ggcagataca agcaacagta ataaaagcca aactgacagt cttccagcca ttattccggc
      601 tttagaaaag taatggtgtt gggcgcggtt gtgcccgcgg tgataacgaa ttgcatcgct
      661 tcgtcgagcg tccaatcggt cgagatgacc tctgccacag gcacgatttc tatgtaccca
      721 gaagtcgggt tgggtgcggt cggcacatac acgactgcca attcctgccc gctcgcctca
      781 tcgatcagga tgcgagtcac aaacccgatc gtcttcattt gcggcgacgg aaaatcaatc
      841 aggacgaccc gctcaacacc ctcgggcttg gtttggaacg ccgcaatgaa tatcttgatg
      901 ccaccataga tcgtctgacc agaggaatgc gctccagcag cgcctcaaac cagcccaata
      961 tgcgtcgtcc gagtacgcga gttgtcgccc agcccaagaa ataaagcatc actagcgtga
     1021 gcaccacggc aattacatat tccacccagg gtgtagacaa cccttccgcg agctcggggg
     1081 agaagcgata gatggcagtg aaaaacgttg atgccccggg tcgtcccagg cgggacaagg
     1141 tattgaatag gagttcagca accagccatg tggccaggag cggtgtcaat accagcgcac
     1201 cggcgagaat atttttctgc gcgttgcgga tgcccaattt gt
//
LOCUS       DASQSL010000328         1153 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_97719, whole genome shotgun sequence.
ACCESSION   DASQSL010000328 DASQSL010000000
VERSION     DASQSL010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97719"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            131..373
                     /locus_tag="VE844_03295"
     CDS             131..373
                     /locus_tag="VE844_03295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015419868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HZC00407.1"
                     /translation="MATETAIDKELNLQGEVCPYTFVKSKLALEIMQPGQVLRVTVDN
                     DESAANVPRSMQNEGHNVLGVTKLNDKDWQIVVRKS"
     gene            405..>1153
                     /locus_tag="VE844_03300"
     CDS             405..>1153
                     /locus_tag="VE844_03300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013121085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HesA/MoeB/ThiF family protein"
                     /protein_id="HZC00408.1"
                     /translation="MAGEISAKLAHLRAPITSLDFSEEEIRRYSRHIVLPEVGGTGQK
                     RINRASVLVVGAGGLGSPVALYLAAAGVGKIGIVDNDVVDTSNLQRQILHSTATVGRK
                     KVESARDTLLALNPNLEVTPHDVRLNSGNILQILKGYDVVAEGSDNFPTKFLVNDACV
                     MTGTPVSMAGIFRFSGQLLTVIPRHGPCYRCLIPQPPPPGAIPSCQEAGVFGAMAGVV
                     GVIQATEILKLILGKGGVLNGRLLLFEALQMR"
BASE COUNT          264 a          316 c          355 g          218 t
ORIGIN      
        1 aaccgcttcg gcgtcttcgc taaggttgga aacgtccctg cgggaaacgg cgcaatacaa
       61 cataggactt gtcgccatcc cgatcggacg gaataacagt acgcgaggcc tttcatagaa
      121 ggaaaccatt atggccactg aaacagcgat cgataaagaa ttgaatctgc aaggtgaggt
      181 atgcccttac acctttgtca aatccaaact ggcactggag attatgcagc cagggcaggt
      241 gttgcgcgtg accgtggata acgacgaatc ggccgccaac gtaccccgca gcatgcagaa
      301 tgaaggccac aacgtcctgg gggtgaccaa gctgaacgac aaagattggc aaatcgtcgt
      361 ccgaaaatcg taagatacgg ctgtcaacag ccaaggaggg ttgtgtggcg ggtgagatat
      421 cggcaaagct cgcacaccta cgtgcaccga tcacctcgct ggacttctcc gaggaggaga
      481 tccgccgcta tagccggcac atcgtgctgc ctgaggtggg agggaccggc cagaaacgga
      541 tcaaccgcgc ctcggtattg gtcgttgggg ccggagggtt aggttcgccg gtggcgctct
      601 atctggcggc agcaggcgtg gggaagatcg gtatcgtcga caacgatgtg gtcgacacca
      661 gtaacttgca gcgccagatt ctgcacagca cagccaccgt cgggaggaaa aaggtggagt
      721 cggcgcgcga cacactgcta gcgttgaatc ccaacctgga ggtcaccccc cacgacgtac
      781 gcctcaactc gggtaacatt ctgcaaatcc tcaaaggcta cgatgtcgtg gccgagggga
      841 gcgataactt cccaaccaag tttctggtca atgacgcctg cgtcatgacc ggtacaccgg
      901 tatcgatggc ggggattttc cgcttttccg ggcagctgtt aacggtgatc ccccgccacg
      961 gcccatgtta tcgctgtttg atcccacaac cgccgccccc gggggcgatc ccgagttgcc
     1021 aggaggccgg ggtatttggg gccatggcgg gggtggtcgg cgtcattcag gccaccgaaa
     1081 tcctgaagct gattctgggg aaaggggggg tgctgaacgg ccgattgttg ctcttcgagg
     1141 ccctacaaat gcg
//
LOCUS       DASQSL010000329         1239 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_43780, whole genome shotgun sequence.
ACCESSION   DASQSL010000329 DASQSL010000000
VERSION     DASQSL010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1239
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43780"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            96..479
                     /locus_tag="VE844_03305"
     CDS             96..479
                     /locus_tag="VE844_03305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008906821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HZC00409.1"
                     /translation="MRRVFKTRHLSRWMRKTELTDQALCEAVVAMEQGLIDADLGGGV
                     IKKRVPLPGRGKSGSTRTLVATNRGNRWFFVFGFEKNERANVSPKELEALRAIAADLL
                     RLSSDELNAHVESEALQEICHDCQD"
     gene            463..786
                     /locus_tag="VE844_03310"
     CDS             463..786
                     /locus_tag="VE844_03310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009906855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
                     /protein_id="HZC00410.1"
                     /translation="MIAKTKATSRILDAVHETARDLHAAGFIDKRRMREYDALCLTPI
                     PEYSGEKIRALRERYKLSQAVLASVLNTSLSTVRQWEIGEKHPSGPSLKLLNLLDRKG
                     LEALI"
     gene            complement(855..1127)
                     /locus_tag="VE844_03315"
                     /pseudo
     CDS             complement(855..1127)
                     /locus_tag="VE844_03315"
                     /inference="COORDINATES: protein motif:HMM:NF025016.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b N-terminal domain-containing
                     protein"
BASE COUNT          312 a          359 c          357 g          211 t
ORIGIN      
        1 ttttcaccgc aaaccacggt cagaaaataa atctgtctcc tgtttctttg ggaactccaa
       61 tggccaccca atacactaag tgatatagtt ttacgatgag acgagtcttt aagacccgcc
      121 atctcagccg ctggatgcgg aagacggaac tgaccgatca ggcgctttgc gaggccgtcg
      181 tagcgatgga gcaagggctg atcgatgccg atctgggtgg cggggtgatc aagaagcgcg
      241 ttccgctgcc aggtcgaggc aagagcggga gtacccgcac cctggtggca acgaacagag
      301 ggaaccgctg gtttttcgtg ttcggcttcg agaagaatga gcgagccaac gtcagcccca
      361 aggaactgga agctttgagg gcgattgccg ccgacctgct gagactttcc tcggacgagc
      421 tcaacgccca tgtcgagagt gaagcgttac aggagatttg ccatgattgc caagactaaa
      481 gcgaccagcc gaattttgga cgcggtccac gagaccgcgc gtgacctcca tgcggctggc
      541 ttcatcgata agcgccggat gcgggagtac gacgccctat gccttactcc catcccggag
      601 tactccggcg agaagatccg agccctgcgc gagcgctaca agcttagcca agccgtactc
      661 gcctccgtac tcaacacaag cctgtcaacg gttcggcagt gggagatcgg cgagaagcac
      721 ccgagcggtc cttcgctcaa gctactcaat ctgctggacc ggaaggggtt ggaagcctta
      781 atctgaaagc cccatcgcaa caggggcacg gcgatatgga gaaacaccat cagcgtgaaa
      841 aaccgcccgc tcaaggtcgc attgtccagg aaattgcggg cgatgggctc accgaagagc
      901 ggcagggcgt cgagccactc cgtggtggcg atggccacga actgcgccag cttatcccag
      961 accagccagt agccactgat gccacaggca aagacgaacc agagcaggac cacacccgtg
     1021 aaccaggcaa accatctcag cccgcgcaag gggcccagga taaattcacg ggagagatgc
     1081 agcccgtagg ctgggataag tcgaagacga atcccagcaa cgaacaatcc cgaaagctgg
     1141 gattgattgc attcatccca gcctacgcgc taaggatcaa ggacaaatta ccagggacaa
     1201 cactgttcct cagccactga gtcccgccag cagcgactg
//
LOCUS       DASQSL010000330         1097 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_28817, whole genome shotgun sequence.
ACCESSION   DASQSL010000330 DASQSL010000000
VERSION     DASQSL010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28817"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1006
                     /gene="rapZ"
                     /locus_tag="VE844_03320"
     CDS             <1..1006
                     /gene="rapZ"
                     /locus_tag="VE844_03320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013824292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HZC00411.1"
                     /translation="RRRSRAPRRHQVPPGTDPRSPDVGWQEGIGATARWDSPPLRWRG
                     QIEMRDTQIIIVTGLSGSGKSIAIKCFEDLGFYCIDNLPTVLLPTFAELCAQAGDIRR
                     TALGIDIRDPDFLLSFPAQIASLRQAGFSCEILFLEARDEVLTRRYSETRRKHPLAEQ
                     VPVLEAIKIEREKLAGLRAIADRIIDTSDYNVHQLRAALASWYTAGNHQQRMTISVLS
                     FGYKYGLPFNADLVFDVRFLPNPHFVEQLRAGSGNDQPVVDYLLASQMTQDFLKHCFD
                     FIQFLLPQYEREGKAYLTIALGCTGGRHRSVAIANLLHSHLEAQGYQLTLTHRDLDKL
                     "
BASE COUNT          215 a          338 c          313 g          231 t
ORIGIN      
        1 ccggaggaga agccgcgcgc cgcgccgtca ccaagtaccg ccgggaacgg acccgcgaag
       61 tccggatgta ggctggcagg aagggatcgg cgccacagcg agatgggata gccctccctt
      121 gaggtggcgg ggacagatcg agatgaggga tacacagatc atcatcgtga ccggcctttc
      181 gggctctggc aagagcatcg ccatcaaatg cttcgaagac ctgggctttt actgcatcga
      241 caacctgcca acggttttgc tccccacctt cgccgaactc tgtgcgcaag ccggtgacat
      301 caggcgcacc gcactcggga tcgatattcg cgatccggat tttctgctgt cctttccggc
      361 acagattgcg tcgcttcgcc aggcgggttt ttcctgtgag attctcttct tggaggcgcg
      421 ggatgaggtg ctgacccgcc gctatagcga gacacgccgt aaacacccgc tcgccgaaca
      481 ggtgcccgtg ctggaggcca tcaaaatcga gcgcgagaag ctcgcagggt tgcgtgcgat
      541 cgccgatcgc atcatcgaca cctcggatta caacgtccat cagttgcgcg ccgccctggc
      601 ttcatggtat accgcgggca accaccagca acgcatgacc atttcggtgc tgtccttcgg
      661 ctataagtat ggcctcccct tcaatgccga tctggtcttc gatgtgcgct tcctgccaaa
      721 tccacatttt gtcgagcagc tccgggcagg tagcggtaac gatcagcccg tggtggatta
      781 cctcctggcg tctcagatga cgcaggactt tctcaaacac tgcttcgact ttatccagtt
      841 cctcttgccc cagtatgagc gcgaagggaa agcctatctc accattgcgc tcggatgcac
      901 cggtggccgt catcggtcgg tcgcgatcgc gaacctgttg cactctcacc tggaagcgca
      961 ggggtatcag ctgacgctga cccatcgtga cctcgataaa ttgtgatggc gggcctgtcc
     1021 gccgacatac gttcttcgct tgcaggatca cccgctgatc agtactatag agagccgcac
     1081 acctgcgagt gggccat
//
LOCUS       DASQSL010000331         1528 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_166151, whole genome shotgun sequence.
ACCESSION   DASQSL010000331 DASQSL010000000
VERSION     DASQSL010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1528
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166151"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1112
                     /locus_tag="VE844_03325"
     CDS             <1..1112
                     /locus_tag="VE844_03325"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016717 - oxidoreductase activity, acting
                     on paired donors, with oxidation of a pair of donors
                     resulting in the reduction of molecular oxygen to two
                     molecules of water [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA desaturase"
                     /protein_id="HZC00412.1"
                     /translation="LKGPYLMYPNKLSGVDAPSEGPAPALTDGSAPRSRTNQYAELKQ
                     LIKHKGLLDQQPAYFVGKIVLTFILLAVGLTLLFILQNTWLQLLNAAYLAFVSVQISL
                     LAHDIGHRQFSFRASWKNDWATLILGNLLLGVSRQWWIDKHNEHHGHPNQMDVDPDVD
                     IPLLAFEEEQALHKRGLARFVVKYQAALILPLSLLQALSMHRSSIQFLFEKRARSTLV
                     EALVMGAHFVLYFGLIFSVLEPLQALLFIAVHRGLFGMFMVSIFAPNHKAMPVLERES
                     QLDFLHRQVLTSRNVIAHPITDFWFGGLNYQIEHHLFPRLPRNKLREAQQIIRDFCGD
                     HSIAYHETSVLQSYREILQHLHEVGAPLREARKAR"
BASE COUNT          342 a          472 c          417 g          297 t
ORIGIN      
        1 ggttgaaagg accatatctc atgtacccta acaagctatc cggggtcgat gcgccaagcg
       61 aaggtccggc tccggccctt actgacggct cagcgccacg ctcacgaacc aatcaatacg
      121 ctgagctaaa gcagctcatc aaacacaaag ggctcctaga tcagcagccc gcctactttg
      181 tgggcaagat cgtcctcacc ttcattctac tggcggtagg cctgacctta ctgtttatcc
      241 tacagaacac ctggctccaa ctcctgaacg ccgcctatct ggccttcgtc tccgtgcaga
      301 tcagccttct agcccacgac atcgggcacc gccaattctc cttccgcgcc tcctggaaga
      361 acgactgggc taccctcatc ctcggcaacc tgttgctcgg cgtcagccgc cagtggtgga
      421 tcgacaagca caacgagcat cacggtcatc caaaccagat ggacgtcgac cccgacgtag
      481 atattccact gctggccttt gaagaagagc aggctctgca caagcgaggg ctcgcccgct
      541 tcgtcgtgaa ataccaagcc gccttgatac ttccgctgtc gttgctgcag gcgctgagca
      601 tgcatcgcag cagcatccag tttctattcg agaagagagc aaggagcacg ttggtcgaag
      661 cgctcgtcat gggagcacac ttcgtgctct actttggctt gatattctcc gtgctggaac
      721 ccctgcaggc gctgctgttc atcgccgtcc atcgcggact gtttggcatg ttcatggtct
      781 cgatcttcgc gcccaaccac aaagccatgc ccgttctgga gagggagagc cagctggact
      841 tcctgcaccg tcaggtgctg accagccgga acgtcatcgc ccatccgatc accgacttct
      901 ggtttggcgg cctcaactac cagatcgaac accacctgtt tccaagatta ccccggaaca
      961 agttgcgaga agcacagcaa atcatcagag acttctgtgg agatcactcc atcgcctacc
     1021 acgagaccag cgtgctccag tcctaccggg agatcctcca gcacttgcat gaggtcggtg
     1081 cgccgctgcg cgaagcaaga aaggcgaggt gacgggtttg cagatcaggc gcacttagaa
     1141 tatgaataaa ccgatacgcg aacgggccga ccgctgcggg aaagcgagcc tcacagggcc
     1201 gcacgacgga gtatccgatc gcatcggcga gggacctgct accttccctg tgtggtcggc
     1261 tttacaagta gcggggcact ctggattacc cgcggcaact cgacgtcgtg tgcaaagagc
     1321 agagatagac ggtcagtggt tacgacagag tattactcaa ggatagggct tatagtgtga
     1381 caaggaaagc ggtcatcatc ggcaacccga actcggggag cgcgggggac gagggttacc
     1441 tagagcgcta cgcgacgatc ctgcgctccg gcggccttga ggtagaggtg ctgaacaccg
     1501 agcgcccgga ccacgccacc gagctcgc
//
LOCUS       DASQSL010000332         1690 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_153737, whole genome shotgun sequence.
ACCESSION   DASQSL010000332 DASQSL010000000
VERSION     DASQSL010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1690
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153737"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(128..448)
                     /locus_tag="VE844_03330"
     CDS             complement(128..448)
                     /locus_tag="VE844_03330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008312843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5615 family PIN-like protein"
                     /protein_id="HZC00413.1"
                     /translation="MRVLFDQGVPVPLRESLRQHEVSTAYERGWATLKNGELLDAAER
                     EGFEILVTTDKNLRHQQNLGARRIAIVVLTSTSWPRIQPEITAVVRAVNGAYPGSYAE
                     VQIL"
     gene            complement(449..670)
                     /locus_tag="VE844_03335"
     CDS             complement(449..670)
                     /locus_tag="VE844_03335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010302960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF433 domain-containing protein"
                     /protein_id="HZC00414.1"
                     /translation="MIDWSTCPAVERDPQRVSGAWVFRGTRVPVAALFENLEDGAQVS
                     QFVQWFPGVSIEQVRAVLEHAARSALAPA"
     gene            1378..>1690
                     /locus_tag="VE844_03340"
     CDS             1378..>1690
                     /locus_tag="VE844_03340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001556378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase N-terminal
                     domain-containing protein"
                     /protein_id="HZC00415.1"
                     /translation="MIAEAHIDNPWHRVNWRRARVAVRRLQTRIVKAMKAGHWRLVRK
                     LQNLLTRSTAAKLLAVRRVTSNRGKKTPGVDGVVFDTPRAKWQAMERLNSAGYRPSPL
                     RR"
BASE COUNT          392 a          495 c          497 g          306 t
ORIGIN      
        1 acagttagaa gaactcatgt aaaccccctt tcatatgttg gtatcgcggg tttcccgtat
       61 ccgcctaacg ccaaagctca ccgggcgcga cgataggagc gctccggtgc agcgccgtgt
      121 tggccagtca aagaatctga acctccgcat agcttcccgg gtaggcacca ttaactgcgc
      181 gaaccacagc cgtgatctcg ggctgtatgc gcggccagct tgtcgaagtc agaacaacga
      241 ttgcaatgcg tcgcgcccca aggttctgct gatgcctgag gttcttatcg gtcgtgacga
      301 gaatctcaaa cccttctcgt tctgctgcgt caagcaattc gccgttcttc agcgtcgccc
      361 aaccgcgctc gtatgcggtc gagacttcgt gctgcctcaa tgattcccgc aagggcaccg
      421 gtaccccctg gtcaaataat acgcgcactt aagccggagc cagcgcactc cgcgcagcat
      481 gttcgaggac agcgcgaact tgttcaatcg agacgccggg aaaccattgc acgaactgtg
      541 atacctgcgc gccatcctcc aggttctcaa acagtgcagc aaccggcaca cgtgtgcccc
      601 ggaacaccca cgcaccactg acgcgctgcg ggtcccgttc aacagcaggg caagtcgacc
      661 agtcaatcat aaacctaata gtagcactga caccttttga cggctaacga cttggcatga
      721 ggggcgccgc gctttctgcg gcgtccctct ccagcgcctc gttagggtgc gacacgaagt
      781 cgcatgagat ttgtcaagga gcagtataaa agacctggtg ttctgccacc agtaccctac
      841 cgggacatgc gccgggagta atcccggggt gtgaagctct cgggacaatg aagcctccgt
      901 ctttgaacgg gccaccgatc cgtaagggga gatggtgact cccagcctca ggggggtcag
      961 gagctagggt tggaaggtag ggctaattta aggtgaaccg ctgataaacg ccgttatgcg
     1021 caacaagccc aagaggctga aaggcttgaa ccaaaaggta aggggtcagg tacaggtgct
     1081 cctaactcac ctgtcgcaga tggtgcaccc tcggcgaaga ggcggggcct accccctcca
     1141 gaagtggtac tcatacggaa cgtggtaaac ccgatgacct ctacaaggat gtagaaagca
     1201 ccccgcaagg ggtaccggca agtcagcggg taggggatac cggagcaagc aaaggccggc
     1261 ctgtaatggg ccggataggg ctcatgccca acccgaaagg gtgcccactt ccggtaggta
     1321 aggatgcacg agaaggtgtg gaacggcagc acgatttagc aagcactgga cagtgacatg
     1381 atcgctgagg cacacatcga caatccctgg caccgcgtca actggcgccg ggccagggtg
     1441 gctgtacgcc ggctccagac acgtatcgtg aaggcgatga aagcaggtca ctggcgcttg
     1501 gtcagaaagc tccagaacct gctgacacgc tcgacggcgg ccaagctttt ggctgtcagg
     1561 cgagtcacct caaaccgtgg caagaaaacc ccgggcgtgg atggcgtggt attcgacaca
     1621 ccccgggcaa aatggcaggc gatggagcgc ctgaattcgg caggctatcg tccctccccg
     1681 ctccggcggg
//
LOCUS       DASQSL010000333         2931 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_139893, whole genome shotgun sequence.
ACCESSION   DASQSL010000333 DASQSL010000000
VERSION     DASQSL010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2931)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2931)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2931
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139893"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            198..1571
                     /locus_tag="VE844_03345"
     CDS             198..1571
                     /locus_tag="VE844_03345"
                     /inference="COORDINATES: protein motif:HMM:NF033540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS701 family transposase"
                     /protein_id="HZC00416.1"
                     /translation="MLAASRTEGDGFAIPQFALNRHDVEGFMDELRGFHHAFRDCFAR
                     SEPREHFFHYMVGQFSELDRKSIEPMALRVEGGNVRAMQRCLSDAVWDDGQLLRTYHQ
                     LVDEDMGDPEGVVIVDESSFPKKGDHSIGVGRQYCGSLGKVDSCQVGVFAAYASRHGY
                     ALVDKRLFMPEPWFTEAYACRRAHCQVPDDHGFQTKPQLAVAMLRALRDEGVLPFKYV
                     VADCLYGQSPAFLEAVEEEASTIYFVSIPADTRCWLQGPVMATKQYRYHGERRTKRVV
                     AATAKEPIAVEMVAKSLHNCFWYRRKVSEGTKGPIEYEFTKRRVTLCYDGLPAKTVWL
                     VMKRTVGERPSYWYYISNAPVSARLPLFVWLSGVRWAIEQCFEEAKSELGMDQYEVRK
                     YAGWHHHMLTSMLAHFFLWHLQIRLGEKSPSYYGVPAEDLVGDGVALQKLDDRRRPST
                     GSRETTA"
     gene            1735..2298
                     /locus_tag="VE844_03350"
     CDS             1735..2298
                     /locus_tag="VE844_03350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00417.1"
                     /translation="MIQYTIQPLAWFVVVAVLMSFIEHQIHRSLMHRKNILSGRLPAF
                     RKVFEHHAILHHRHYHQIFHDEPVPHGQDRHLRLSMKEGFLEALPISALMTTISWQGA
                     MTFLIVVCLHHFIWNQIHMEMHKPENRFFSHWSTYKFLARYHYLHHRYPHKNFNVVFP
                     LADYVLGTNIRASQSDLKDMSRLGLLP"
BASE COUNT          642 a          772 c          849 g          668 t
ORIGIN      
        1 acatgaggcg gatctctctt cgggtaacag gtacccaaag tctgaagcag agaggacacc
       61 agagcgcttg gcgcacagca gatgccgacg aatgggaccg tagtatctaa ccctacaacg
      121 acgcttatat gttgacctga gcttcctcgg tgtatactct gctgtcggct caccagctca
      181 cgcccaggag gccgaggatg ttagcagcga gtcggaccga aggggatggg ttcgccatcc
      241 cgcagtttgc gcttaaccgc cacgatgtcg aaggctttat ggacgaattg cggggttttc
      301 atcacgcctt tcgtgattgc tttgctcgga gcgagccacg ggagcatttc ttccactaca
      361 tggtgggcca gttcagtgag ctggaccgca aatcaatcga gcccatggcc ctgcgggtgg
      421 aaggcggcaa cgtgcgggcg atgcagcgtt gcctcagtga cgcggtctgg gacgacgggc
      481 agttgctccg gacgtaccat cagctcgtcg atgaagacat gggagaccct gagggggtgg
      541 tgatcgtcga tgagtcgagc tttccgaaaa agggcgatca ttccataggg gtggggcggc
      601 agtattgtgg gagccttggg aaagtcgaca gctgtcaggt gggggtgttt gccgcctatg
      661 cgtcccggca tggctatgcc ttggtggaca agcggctctt catgccggag ccgtggttta
      721 ccgaggcgta tgcatgtcgc cgcgcccact gtcaggtgcc cgacgaccac ggatttcaga
      781 ccaagcccca gttagcggtg gcgatgttgc gggcgcttcg cgacgagggg gtgctgccgt
      841 ttaagtacgt cgtcgccgat tgtttgtatg gccagagccc ggcatttctt gaagccgtcg
      901 aagaagaggc aagcaccatc tatttcgtct cgatcccggc cgatactcga tgttggctcc
      961 aaggccctgt gatggcgacc aagcagtatc gctatcacgg cgagaggcgg acgaaacggg
     1021 tggtggcggc gacggcgaag gagcccatcg cggtggagat ggtggccaag agcctacaca
     1081 attgtttctg gtatcggagg aaagtctcgg aggggaccaa agggccgatc gagtatgagt
     1141 ttaccaagcg ccgggtgacc ctgtgttacg atggcctgcc cgccaaaacc gtgtggctcg
     1201 tgatgaagcg caccgtcggg gagcgcccgt cctattggta ctatatcagt aatgcccctg
     1261 taagtgcgcg tttacccctg tttgtctggt tgagtggtgt gcggtgggcc atcgaacaat
     1321 gcttcgaaga ggccaaaagc gaactgggca tggaccagta tgaggtccgc aaatacgccg
     1381 gctggcacca tcacatgctg accagcatgt tagcccactt cttcctgtgg catttgcaga
     1441 tacgcttggg ggaaaaaagc cccagctatt acggtgtccc agctgaggac cttgttggtg
     1501 atggtgttgc ccttcaaaag ctcgacgatc gaagacgtcc ttcaactggt agccgggaga
     1561 caacagcgta accaccgtgc atggctgtcg cacagaagca ggcgaatgca tgtagttcct
     1621 ggttaattga cgttgcaggg ctatatgatt atcagaagcc agcgtgtatc ctcactgacg
     1681 ttcagtattg gaaaagccag gagatcatcc ctgaaccatg gcaagtaatt tattatgata
     1741 caatacacca tccaacctct tgcttggttt gttgttgtag ctgtcttgat gtcgtttata
     1801 gaacaccaga ttcatcgcag cctgatgcac agaaaaaata ttttgagtgg ccgcctaccg
     1861 gctttcagaa aggtgtttga gcaccacgct attcttcacc acaggcatta tcaccagatc
     1921 tttcacgatg aaccggtgcc ccatggccaa gatcgacatt tgcgcttgag catgaaggaa
     1981 ggctttctag aagcactccc gatttccgca ctcatgacga caatctcatg gcagggtgcc
     2041 atgacctttt tgattgttgt ttgcctacat catttcattt ggaatcagat ccacatggag
     2101 atgcataagc cagaaaatcg cttctttagt cattggtcga cctacaagtt tcttgcccgg
     2161 taccattacc tgcatcacag atacccacac aagaacttca atgttgtttt cccgcttgca
     2221 gactatgtgc taggaacaaa cattcgtgcc agccaatcgg acttgaaaga catgtctcga
     2281 ttagggttgc taccatgacg tcgggtagaa gctcacgcgg tctcagaaaa acccagcgcg
     2341 aaagcgcgcg tgtagctgca catggtgcgt tttagtgccg tttcaatggt ggcgttgtgc
     2401 tcatgaacta cgattatctg ggaaactgta gccataatac ccctacaatg acatggctac
     2461 acacttgctt tgtagaacca agagttatgg gcacggcaaa aaccgctttc tcttgccaat
     2521 tgccaccgta agaccgcgat ttcgcatatg caaattggtc aacttactaa agtgtcgttg
     2581 tagggctatt ctatctcatc gcctctgcgt aacctctgtg gtttcttgaa cggctgacgc
     2641 ttggacttgg cgtgactgcg ctcggagggt ccctggcgtg gtgggcctct gccccggcag
     2701 agccgccgca gcgaaagacc ccaagcggcg acctgctcga gacggtgccc cgaggggagc
     2761 tcccgtcctt tgcgaaagca ggcggccccc aaagtcgagg cggtctaccg ctacgcggtg
     2821 gcgcacgagg agacactcca gtacatcccg tgcgtgtgcg gctgcggcgc catcggccac
     2881 cggcataacg cccactgcta tgtggccgaa cgccttccgg gtggggcgat c
//
LOCUS       DASQSL010000334         1050 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_193540, whole genome shotgun sequence.
ACCESSION   DASQSL010000334 DASQSL010000000
VERSION     DASQSL010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193540"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..571)
                     /locus_tag="VE844_03355"
     CDS             complement(<1..571)
                     /locus_tag="VE844_03355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00418.1"
                     /translation="MQYDLFTTFFGKNKRVLSNTIELWDAIPKYAASPRQQNACRDRN
                     GRLPVHPQEFEYRPSQRDAPAITCRLKVQPASIEVEPGRFVDFYPSADEELIEEILKK
                     IFSDQQYGVHSVAGNESWVRFTLYMIQKELKTRRKTRSIDEIKRSLEIMAKAVLEVEF
                     LTPSKQLIYTDPILSSLTRVTRTSYLQDPK"
BASE COUNT          194 a          299 c          311 g          246 t
ORIGIN      
        1 ccttggggtc ctgcaggtag ctggtccgcg tcacccgcgt caggctgctc agaatggggt
       61 cggtatagat cagctgcttt gacggcgtga ggaattccac ctcgaggacg gccttagcca
      121 tgatttcgag ggagcgcttg atttcatcga tgctgcgcgt cttccgccgt gttttcagct
      181 ccttctggat catgtagagg gtaaagcgca cccagctctc attgccagcg accgaatgca
      241 cgccgtattg ctgatcggaa aagatctttt tcagaatttc ttcgatcagc tcctcgtcgg
      301 cgctcggata gaaatcaacg aaccggcccg gctccacctc gatagaagcc ggttgcacct
      361 ttagcctaca tgttatggcg ggtgcgtcgc gctgcgaggg gcggtattcg aattcctgcg
      421 gatggacggg cagacgcccg ttacggtccc ggcaggcgtt ctgctgacgc ggggaggcgg
      481 cgtatttggg gatggcgtcc cacagctcga tcgtattgga caggacgcgc ttgtttttgc
      541 cgaaaaacgt ggtgaagaga tcgtactgca tgttcctctc cgccctcacg ggcggcgacc
      601 tgcgcggttc gggaaggccg gataccatgc gatagatacc cccctactct gccatcagcc
      661 ggggaaaatt cagcgctttt gcatcttctg agggtggtga gcagtataat acgccgggtt
      721 aactttgtga atcacgataa ccggacgggg cctggagagc ggttgtggat gcgggcttcc
      781 tcagagatcc gtaaaccggg tcagccccgg gttgaatgat aattgctcaa cgccgatcgg
      841 ccccatccgc tgcttggcga tgatcacttc ggcgatattg gtcacgtctc tcaggcggct
      901 ctcccagccg gcatgccgct ccaggaacgc ctcatcctgc tcttcgcccc gctgccgcgg
      961 ctcatcacgg cttactgatc cgtgcagagt tctctaaacc tcagggtctt aaagccttga
     1021 ctgatgaggg ttccagtcga ctgaaacttt
//
LOCUS       DASQSL010000335         1191 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_71284, whole genome shotgun sequence.
ACCESSION   DASQSL010000335 DASQSL010000000
VERSION     DASQSL010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71284"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1147
                     /locus_tag="VE844_03360"
     CDS             <1..1147
                     /locus_tag="VE844_03360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013219407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HZC00419.1"
                     /translation="LVSEAGFGNGDTCSLLQTGASDVFTWHRQPDPASQAVARLERWT
                     AVNQLVNSPLVRNNLIGQSPAWNSILRQIVEMARFTDASVLILGESGTGKELIARLIH
                     TLDPRAKKRDLVVLDCTTIVPELSGSEFFGHERGAFTGAVTPRDGAFVLADGGTLFLD
                     EVGELPLGLQAQLLRVVQEYTYKRVGDNTWQRTDFRLVCATNRDLLQEVQQGRFRCDL
                     YYRLANWICKLPSLRERPEDILPLAQHFLTELRPDKKPPELDEPVRDYLVRQDFPGNV
                     RDLKQLVSRISYRHVGEGPITVGDIPEDERPAEEFAQRDWRDGFFEQAIRRALTMGGR
                     LKEISQAASDTAIRITVSDEEGNLQRAARRLGVTDRALQMRRANQRV"
BASE COUNT          258 a          335 c          359 g          239 t
ORIGIN      
        1 cttggtctct gaggccggat tcgggaatgg cgatacctgt tcccttctgc agacaggcgc
       61 atccgatgtg ttcacctggc accgccagcc tgatccagcc tcccaggcag tagcccgcct
      121 tgaacgctgg accgctgtaa accaactggt gaattcaccg ctagtacgga acaacctgat
      181 cgggcaaagc ccggcctgga actcgatatt gcgccagatc gtcgagatgg cgcggttcac
      241 ggacgcctca gtgttgattc tgggggagag cggaacgggc aaggaactga tagcacgttt
      301 gatacatacc ctggatccgc gagcaaaaaa gcgtgatctc gtggttctcg actgcaccac
      361 catcgtccct gagctctccg gcagtgaatt cttcgggcat gagcgggggg cctttaccgg
      421 tgcagtcacc ccgcgcgacg gtgcttttgt attggcagat ggcggcacct tgtttctgga
      481 cgaggtgggg gagctaccgt tgggccttca agcccagtta ttacgcgtcg tgcaagagta
      541 cacctacaag cgggtgggcg acaatacctg gcaacgcacg gatttccgcc tagtatgcgc
      601 caccaatagg gacctgctgc aggaggtaca gcagggaagg ttccgctgcg acctgtatta
      661 ccgcttagcc aattggatct gcaagctacc ctcgcttcgc gaacgtccgg aggacatcct
      721 gcccctggca cagcatttcc ttacggaact gcggcctgac aaaaagccac ccgaactgga
      781 cgaaccggtg cgcgactacc tggttagaca agattttccc gggaatgtgc gtgatttgaa
      841 acaattagtg tcgcgcatca gttaccgtca cgtgggggaa ggccccatca ctgtgggcga
      901 tattcctgag gacgagaggc ctgcagagga gtttgcacaa agggattggc gcgatggatt
      961 tttcgagcaa gctatccgcc gagcgctgac catgggggga agactcaaag agatcagcca
     1021 agccgccagc gataccgcta tccgcatcac ggtaagcgac gaggagggta atctacaacg
     1081 cgcggctcgc cgcttgggcg taaccgatcg cgcattgcaa atgcgtcgag ccaatcagcg
     1141 cgtgtgacgc gccctacgct tacttgctgc gggaggttga agcgctgatt g
//
LOCUS       DASQSL010000336         1235 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_2810, whole genome shotgun sequence.
ACCESSION   DASQSL010000336 DASQSL010000000
VERSION     DASQSL010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2810"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..372
                     /locus_tag="VE844_03365"
     CDS             <1..372
                     /locus_tag="VE844_03365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011421355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00420.1"
                     /translation="AIFAITDDPFILFSSNAFAILGLRSLYFALAGIMDKFHYLRLSL
                     ALLLALVGVKMLLKDVLHTVPNITYYTLGVIALILTGGVVASLIRAQRMANKDEPEGP
                     QERREIPAETKHRGWVPILPE"
     gene            369..620
                     /locus_tag="VE844_03370"
     CDS             369..620
                     /locus_tag="VE844_03370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00421.1"
                     /translation="MTTRVLSKAVPVLWREWPLLMNLATTGLFFLFGGIWLADLADPA
                     WFALMLAWLFTVILFSAFAVVRHAESLAASWASRWGRSC"
     gene            614..1042
                     /locus_tag="VE844_03375"
     CDS             614..1042
                     /locus_tag="VE844_03375"
                     /inference="COORDINATES: protein motif:HMM:NF013832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00422.1"
                     /translation="MLTLSVTGIEVMIISAVMLTGEGSAVLARDAMFAVVMIVLNGMV
                     GLSLLLGGLRYHEQTYNLQGANAFLAVIVPLAVLGLVLPNFTMSSPGPTFSPLQAIFL
                     TIMSAGLYGVFLAIQNVRHRDYFILPDSGEAVTEHHMSWD"
BASE COUNT          223 a          361 c          358 g          293 t
ORIGIN      
        1 gccattttcg ccatcaccga cgacccgttc atccttttca gcagcaacgc ctttgccata
       61 cttggactgc gctcgctgta cttcgccctg gccgggatca tggacaagtt ccactacttg
      121 aggctgtcat tggctctgct cttggcgttg gtcggtgtga agatgctgct gaaggatgtg
      181 ctgcacacgg tgcccaatat cacctattac acgctagggg tgattgccct gatcttgacc
      241 ggtggtgtgg tcgcttccct tattcgcgcg cagcgcatgg ccaacaaaga cgaacccgaa
      301 ggaccgcagg agcgtcggga gataccggct gagaccaagc accgaggctg ggtcccgata
      361 ctgcccgaat gacaacacgc gttttatcta aagcggtacc cgtgctttgg cgcgaatggc
      421 cgctgctgat gaatctcgcc acgacggggt tgtttttcct gtttggcggg atttggctcg
      481 ccgacctggc ggatccggcc tggttcgcat taatgctggc ctggctcttc accgtgatcc
      541 tcttctccgc cttcgcggtg gtgcggcacg cggaaagcct tgcggcaagt tgggcgagcc
      601 gttggggacg ctcgtgttga ccttatccgt gaccgggatc gaggtgatga taatctcggc
      661 ggtcatgctg accggggaag ggagcgccgt gctcgcccgg gatgcgatgt tcgcggtcgt
      721 gatgatcgtg ctcaacggca tggttggcct gtccctgctg cttggcgggc tgcgctacca
      781 cgagcagacc tacaacctgc aaggcgccaa cgccttcctg gccgtgattg tgccgctggc
      841 ggtgctcgga ctggtcctgc cgaactttac gatgtcatct cccggcccga ccttctctcc
      901 gctccaggcg atcttcctca ccatcatgtc ggccgggctg tacggcgtgt ttctcgcgat
      961 ccagaacgtt cgccaccgcg actacttcat tttgcccgat tccggtgaag ccgtgactga
     1021 gcatcacatg tcctgggatt aatgcgggtt aaccggaatt tctgtacctt tataattcag
     1081 ccccttaagg ctatcctgtg tttaccggga ttaacggaaa ttaacacaca gagtttgacc
     1141 gaggttatac cgtcaaacta ggaggcaggg acatggcgac acgactgaat ttcactaaac
     1201 gggacataga cgccctggcg ttaccaccac agggc
//
LOCUS       DASQSL010000337         1610 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_57560, whole genome shotgun sequence.
ACCESSION   DASQSL010000337 DASQSL010000000
VERSION     DASQSL010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1610)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1610)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1610
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57560"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            24..281
                     /gene="rpmA"
                     /locus_tag="VE844_03380"
     CDS             24..281
                     /gene="rpmA"
                     /locus_tag="VE844_03380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020395417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HZC00423.1"
                     /translation="MAHKKAGGSTRNGRDSQSKRLGVKRFGGERVVAGNILVRQRGTG
                     FHAGVNVGCGKDHTLFAKVDGQVRFEMRGARQHIYINVIPV"
     gene            347..1393
                     /gene="obgE"
                     /locus_tag="VE844_03385"
     CDS             347..1393
                     /gene="obgE"
                     /locus_tag="VE844_03385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014778925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HZC00424.1"
                     /translation="MKFVDEAVIRVEAGKGGKGCVSFRREKYIPYGGPDGGDGGNGGS
                     IYLAADEGLNTLVDFRYRRLFRAAHGQPGGGSQCSGKAGADVMIRVPVGTLVYDVDTS
                     ELLGDLVSHGERLLVARGGIHGLGNARFKSSTNRAPRKATKGTPGEARNLRLELNLLA
                     DVGLMGMPNAGKSSLIRTLSSARPKVADYPFTTLQPHLGVVRTGSERSFVIADIPGLI
                     EGAAEGAGLGTHFLKHLARTRLLLHMIEVGYSSEEETADPASRIRAIEAELKRFSEKL
                     YAKERWLVFNKIDLLAVHEREAHCRTIAIRAAWTGPVFLVSALTGEGCQALMNTIQER
                     LDQLQAEKNQTDHK"
BASE COUNT          391 a          381 c          485 g          353 t
ORIGIN      
        1 agaagggcaa cgaggagtga gaaatggcac ataagaaagc aggaggcagc acgcgaaacg
       61 gacgggactc tcaatctaaa cgcctaggcg tcaaacgctt tggcggagag cgtgtggtcg
      121 caggcaatat attggttagg cagcggggaa cgggtttcca cgcaggcgtt aatgtaggat
      181 gcggtaagga tcacaccttg tttgccaaag tcgatgggca ggtgcgcttt gagatgagag
      241 gggctagaca acatatctat atcaatgtga taccggtata aaatcgattt aataggctat
      301 tcttgcaaag ccccgccagt gacggggctt tttgtttctt attaccatga agtttgtaga
      361 cgaagcagtg atccgcgtcg aggccggcaa gggcggcaag ggttgtgtga gtttccggcg
      421 tgagaaatat attccctatg gtggacccga tgggggagat ggggggaatg gcggcagcat
      481 ctatcttgcg gctgatgagg ggctaaatac cttggtagat ttccgctata gacggctttt
      541 ccgagcagcg catgggcagc cgggcggggg tagccaatgt tcgggcaagg cgggagcgga
      601 tgtgatgatc cgagtgcccg taggcacgct ggtttatgat gtcgatacct ctgaattgct
      661 aggcgatctg gtatcccatg gagaacgcct gctcgtcgcc aggggaggga tccatggttt
      721 gggaaacgca cgtttcaaga gcagcactaa ccgcgctccc cgtaaagcca cgaaaggcac
      781 cccaggcgaa gcgcgaaacc tgcgtttgga gctgaacctg ctcgccgatg tagggcttat
      841 gggtatgccg aacgcaggca agtccagttt gatacgcaca ctatcgtcgg cacggcccaa
      901 agtggctgat tatcctttca ctaccttaca accccatcta ggcgtagtca gaacgggaag
      961 cgagcgcagt ttcgtgatcg ccgatatccc agggttgatc gagggcgcag cggagggtgc
     1021 cggtttaggt acgcattttc tcaaacacct tgctcgaacc cggctgttgc tgcatatgat
     1081 tgaagtcggc tattccagcg aggaggaaac cgccgatccg gcttcgagga tccgagccat
     1141 tgaggctgaa cttaagcggt ttagcgagaa gctctatgcc aaggaacgct ggctggtgtt
     1201 caacaagatt gacttgttag ctgtgcacga acgtgaagca cactgccgca caatcgccat
     1261 ccgagcagct tggacgggcc ccgtgttctt agtatcggcc ttaacgggtg agggctgcca
     1321 ggcgttgatg aacacgatcc aagaaagact cgaccaatta caagcggaga aaaatcaaac
     1381 cgatcataag tgactttgca tacttattgc acttatgtca ggcataggta ggcgccactc
     1441 ttgtctctaa ggcgctagag gggacagaaa gaaaataatc cgagcactcg caaggcaatg
     1501 attaagctat cctggaagac acttcgcctc ctgtggcagc ggtgcggaag aacgcttctc
     1561 atcacctggc cgcttatcct ggtgattacc tctctggtat ttctggcctt
//
LOCUS       DASQSL010000338         1198 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_71287, whole genome shotgun sequence.
ACCESSION   DASQSL010000338 DASQSL010000000
VERSION     DASQSL010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1198)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1198)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1198
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71287"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            191..>1198
                     /gene="aspS"
                     /locus_tag="VE844_03390"
     CDS             191..>1198
                     /gene="aspS"
                     /locus_tag="VE844_03390"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012638796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HZC00425.1"
                     /translation="MRSHYCGHLNTAHLDQEVELCGWVHRRRDHGGVIFIDLRDREGI
                     VQAVFDPGERDSFAVAERVRIEYVLHLKGRVRRRPPGTENSNLATGAVEIVGQSVEIL
                     NSAETPPFQLDEDTIQDEARLRFRYIDLRRERMQRNLRRRAQVCRTLRDFLDEQGFIE
                     IETPMLTKATPEGARDYLVPSRTHLGKFFALPQSPQLFKQLLMMSGLDRYYQIVRCFR
                     DEDLRADRQPEFTQIDIETSFMDEAAITELMEAMIRDLFYQVLDIQLPEPFPRMTYQE
                     AVARFGTDRPDLRIPLEFIEVSDLVKSVEFKVFSGPANDPNGRVAALRAPGAGEELTR
                     KT"
BASE COUNT          250 a          351 c          335 g          262 t
ORIGIN      
        1 ctccaccgct cgctcattcc aagttattct cagctgatgg ccgcagcacg tatcagctga
       61 tataaaacag ccccctgctt caatttcagc cagtaatttt tacatgcgtc gccacgggca
      121 gttggtattg cgctaagccc cgcaagctcc taccatggtt gtgcttttca tctctaagac
      181 tggagccaac atgcgcagcc actactgtgg acatctgaac actgcccatt tggatcaaga
      241 ggtcgagttg tgcggctggg tacaccgccg ccgggatcac gggggcgtga tctttattga
      301 cctgcgggac cgagaaggga tcgtccaggc ggtattcgat ccaggcgaga gagacagctt
      361 tgccgtggct gagcgggtcc gcatcgagta tgtactgcac ttgaaagggc gggtccggcg
      421 gcgccctcca ggcaccgaaa attcaaatct tgcgaccggt gctgttgaga tcgtaggcca
      481 gtcggtcgag attttaaaca gcgccgagac gcccccgttt cagcttgacg aggatactat
      541 tcaagacgag gctcggctgc gtttccgcta tatcgatctg cgccgggagc gaatgcagcg
      601 caatctgcga cggcgcgctc aggtctgccg gacactcaga gactttctcg atgaacaggg
      661 ttttatcgag atcgaaaccc ccatgctcac caaggcgacc cccgagggcg cccgcgacta
      721 tctggtccca agccgaaccc atctcggcaa gttcttcgcg cttccccagt cgccgcaatt
      781 attcaagcaa ttgctgatga tgtcgggcct ggatcgctat taccagatcg tgcgctgctt
      841 tcgcgatgag gatctgcgcg ccgatcgcca acccgagttt acccagatcg atatcgagac
      901 ctcgttcatg gacgaggcgg cgatcacgga gctcatggaa gctatgatcc gcgatctgtt
      961 ttaccaggtc ctggatatcc agttacctga gcccttccca cgaatgacgt atcaagaggc
     1021 ggtagcccga tttggcaccg atcgtcccga tctccgcatc ccgcttgaat tcatcgaggt
     1081 aagcgacttg gtgaaatcgg tcgagttcaa ggtattctcg ggtcccgcca atgatcccaa
     1141 tggccgggtg gcggcattgc gtgccccagg cgcgggtgag gagctgacgc gcaaaacc
//
LOCUS       DASQSL010000339         1005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_97803, whole genome shotgun sequence.
ACCESSION   DASQSL010000339 DASQSL010000000
VERSION     DASQSL010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97803"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(81..887)
                     /locus_tag="VE844_03395"
                     /pseudo
     CDS             complement(81..887)
                     /locus_tag="VE844_03395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007907679.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
BASE COUNT          208 a          296 c          286 g          215 t
ORIGIN      
        1 gctgggagac gtgttgtcca gagcgatgag gattgaattt ttacggagaa caggggcgtg
       61 ggctattact gagagggtgt ttaaaaactt gtcagacgag ccaggcgacg gaccatgaga
      121 tggatcatcg ccacacggat catggcttca ctcgtctggg ttaagtactc ataatctttg
      181 gagagtcggc ggtaacgccc caaccagccg aaggtccgct ccacgatcca acgccagggg
      241 agcagctgga aacccttgac gcctttgggc cgcctgacaa tctccaggcg gacttttcgc
      301 cggggccgta gggcccacac ccatgcgatg aggtccccac cgtaggctcc atcggcccag
      361 atgcgccgca accgggacca ctgatgcccg aggccctcca acagcagctt cgccccatcg
      421 cggtcttgca cgctagcggc ggtgacgacg accgtcagca acaaaccaag cgtgtcgacg
      481 aagaggtggc gtttgcggcc tttaatctgt ttatgcgcgt caacgccgcg gatccccctt
      541 tttccgtggt cttcaccgat tggctgtcga ggatccccgc gctgggttgg cgatgtttac
      601 ccgtggccca cccgcacatc gccccgcacc aggtcgtgca tgagcagcca ggtcccgtct
      661 tgacgccaga tccaaaagta gtgatagaca atctgccacg gcgggaagtc atgcggtaac
      721 agccgccagg caccgccgcc acgcacgata taaaagatgc cgttgagaat ttcccgctta
      781 gggtattgtt ccggtcgtcc gccccgtttg gctttgggca cgtagggttc aatcaacgcc
      841 cattcacggt ccgtgaggtc ggttgagtat ggttttcggg gttccatccc ccgattgtac
      901 cccaagctcc tcacgcgtga cgaagttttt aaacaccctc taactgtctc cgatactgac
      961 caactttgca aaagtaagat gttgattggt gagacggttt tgtga
//
LOCUS       DASQSL010000340         1591 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_139918, whole genome shotgun sequence.
ACCESSION   DASQSL010000340 DASQSL010000000
VERSION     DASQSL010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1591
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139918"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            200..1495
                     /locus_tag="VE844_03400"
     CDS             200..1495
                     /locus_tag="VE844_03400"
                     /inference="COORDINATES: protein motif:HMM:NF033540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS701 family transposase"
                     /protein_id="HZC00426.1"
                     /translation="MDVHASPASLPELDDFLSTFKVHFRRREAQAALERYLTGLLTQL
                     PNKNCDTMAQAVPGTHEQRLQGFLTTMQWDEEELNRQRVEKMIAEATVGNGVLLFDDT
                     GFAKQGKASVGVARQYSGTLGKVGNCQVAVTCCYSDPQASWPVAVRLYLPEPWTADPE
                     RLKRARVPADVTFQTKPEIALLLLDQARAWGVPHRCVVADADYGDNPHFLAGLEARNE
                     RYVVAVRCDFQVRPKHRGAPPNQRADQVLAELPKSQWRTIRWRHGTKGWLRKKFVALW
                     AWRITAEGEAHIGWLLGERAGRGQPEERKFYWSNLPASAPLEELVDYAHRRHAIEQFH
                     EEAKEELGWDQYQGRLWPGFHRHAVTVMLAMSFLTCLELQHRHAQAKRGRPRDPFSPS
                     ARLASSCAASGTPADSTVAASSSCVVVDHDGAVQGTVLT"
BASE COUNT          313 a          455 c          488 g          335 t
ORIGIN      
        1 cagcacaatc tgatccgggt ccgaccgctc tttgaaggct tgccaaagcg cctcaaagtg
       61 agccgggtcg acaatgtttt gatggcggcc gctggcgagg tcatgacgcg ccacacactc
      121 aagacccgca tcgatctcta atactacttt gtcagttctg attccatagg gtatccttcg
      181 ataaaaacgg aggataccca tggatgttca tgccagtccc gcttcactgc ccgagctgga
      241 cgactttttg tcgaccttca aggtgcactt tcgtcgtcgc gaagcccaag ccgccttgga
      301 gcgctacttg acggggctgc taacgcaact gcccaataag aattgtgaca ccatggccca
      361 ggccgtcccc ggcactcatg agcagcgctt gcaggggttt ctcaccacca tgcagtggga
      421 cgaagaggaa ctcaaccgcc agcgtgtgga aaagatgatt gccgaggcca ctgtcggcaa
      481 tggcgtgctc ctctttgacg atacgggctt tgccaagcaa ggcaaggcct cggttggcgt
      541 ggcgcggcag tactcgggga cgctgggcaa ggtgggcaac tgccaggtgg cagtgacgtg
      601 ttgttacagt gatccgcagg cgagttggcc tgtggcggtg cgcttgtacc tgcctgagcc
      661 ttggacagcc gaccctgagc gactgaaacg ggcccgagtg cccgctgacg tgacgtttca
      721 gaccaaacct gagattgccc tgttgcttct ggatcaggcg cgtgcctggg gcgtgccgca
      781 ccgctgtgtg gtggccgacg ccgattatgg cgacaatccc catttcttgg ccggattgga
      841 ggcgcgaaac gaacgttacg tggtggcggt gcggtgtgac tttcaggtgc gtcccaagca
      901 tcgtggtgcg cctccaaacc agcgggccga tcaggtgttg gcagagttgc ccaaaagcca
      961 gtggcgcacc attcgctggc gccacggcac caagggctgg ttgcgcaaga agtttgtggc
     1021 cctgtgggcc tggcgcatca cggctgaggg tgaggcccat attggctggt tgttgggcga
     1081 gcgggcgggc cgcgggcaac ctgaggagcg caaattctat tggagcaacc tacccgcttc
     1141 ggcgccgttg gaggaactgg tcgactatgc gcatcgccgc cacgccatcg agcagtttca
     1201 cgaggaagcc aaagaagagt tgggttggga tcagtatcag ggccgtcttt ggccgggctt
     1261 ccaccgccat gctgtgacag tcatgctggc catgagtttt ctgacgtgtc tggagttaca
     1321 acaccgccac gctcaggcca aacggggtcg cccacgcgac ccattttccc cctcggcccg
     1381 attggcgtcg tcgtgcgctg ccagcggtac accggcagat agcacagtgg ctgcgtcatc
     1441 aagctgtgtt gtggtggatc acgacggagc agttcaggga actgtgctca cttagaatct
     1501 gacaaagtag tactagttgc tcacccttac tctccacgac atacacaaat tcaagttctt
     1561 ccccatcatt tttgcgcgcg atgacgaaat c
//
LOCUS       DASQSL010000341         1657 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_97813, whole genome shotgun sequence.
ACCESSION   DASQSL010000341 DASQSL010000000
VERSION     DASQSL010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1657)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1657)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1657
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97813"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..191)
                     /locus_tag="VE844_03405"
     CDS             complement(<1..191)
                     /locus_tag="VE844_03405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00427.1"
                     /translation="MSAALDRDAAGEVRATCHCLARGRTRIKRGLRIWPNHTPGSMSI
                     RWATVHFGVMGSPNVYHAV"
     gene            complement(231..>1657)
                     /locus_tag="VE844_03410"
     CDS             complement(231..>1657)
                     /locus_tag="VE844_03410"
                     /inference="COORDINATES: protein motif:HMM:NF033517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HZC00428.1"
                     /translation="SRKRGQQPGSQGHGRSDRSILPVVVEVHDLSEMAKHCPQCGEAL
                     AAFPGVEACDIIEVQVQTHIRRLHRPRYQKRCECAQLPGIVTAPPAPRVIPKSPLGVS
                     VWTMVLLDKYLYSRPTHRLCQELEHHGLHLSQGTITDGLQRLKGLVEPLMPVLYERQM
                     TEKLFHGDETRWEVFEEIEGKTGHRWYLWVMQSVSVVYYRMAPGRGADVPKGHFAKLR
                     KDLLKVVLVCDRYSAYKSLALDCDELILAFCWAHVRRDFLKAARSWPELESWMFTWVD
                     DIRELYRLNVSRLQEWDERLPLDQQSSVFDERQRDLVTKLSQMQERCETHLREPELHL
                     AKEKVLSSLQNHWDGLTVFVTRPEVAMDNNTAERILRNPVVGRKNYYGSDSVWSAHFA
                     AMMFSVLQTLLLWSLNPHHWLSVFLQACADNGGQSPADLSPFVPWQMSAGRREALSRP
                     LPVMVPALGGLAQEQREPEGADTS"
BASE COUNT          363 a          522 c          444 g          328 t
ORIGIN      
        1 tgtacggcgt ggtaaacgtt cggggacccc atgactccaa aatggacagt agcccaccgt
       61 atgctcattg agccaggggt atgattgggc cagatgcgca ggccacgctt gatgcgggtc
      121 cgtcccctcg ccaagcaatg gcaggtggcg cgcacctctc ctgcggcatc ccgatcgagc
      181 gctgcggaca tccgtctgcg gttggaacaa gcgacaaagc caaggaggtc ttaggacgta
      241 tcggcgcctt ctggctctcg ttgctcttgg gcaagaccac ctaaagcagg caccatcacc
      301 ggcagcggtc gagacagcgc ttctcggcgc ccggcactca tctgccaggg cacaaaggga
      361 ctgaggtctg cggggctctg accaccgttg tccgcacacg cttgcaaaaa gacgctcaac
      421 caatggtgcg ggttgagact ccaaagcaag agcgtttgca gcacgctaaa catcatggcc
      481 gcgaaatgcg cactccacac gctgtcagag ccataatagt tcttgcgacc caccaccgga
      541 tttcgcagga tgcgctccgc agtattattg tccatggcaa cttccgggcg agtgacaaac
      601 accgtgagcc cgtcccagtg gttttgtagg ctgctcagaa ccttctcctt ggccaggtgc
      661 aactcaggct ctcgaagatg cgtctcacag cgctcttgca tctgactcag tttcgtcacc
      721 aagtcgcgct gtctctcatc aaagactgat gattgctgat ccagtggcaa ccgctcatcc
      781 cactcctgca ggcgggacac attgaggcgg taaagctctc ggatgtcatc gacccaagtg
      841 aacatccaac tctcaagctc cggccaactg cgcgccgcct tgagaaaatc gcgccgaaca
      901 tgagcccagc aaaaggccaa aatcagctcg tcacaatcca gggccagact tttgtaggca
      961 ctgtagcggt cacacaccag caccactttg agcaggtcct ttctcaactt ggcaaaatgc
     1021 cccttgggga cgtcggcccc acgcccaggg gccatgcggt aatagaccac ggagacagac
     1081 tgcatcaccc acaaatacca gcgatggccc gttttgcctt cgatctcttc aaatacttcc
     1141 cagcgcgttt catcaccatg gaagagcttc tctgtcatct gccgctcgta gagcaccggc
     1201 atcagcggct caaccaaccc cttgaggcgt tgtaacccat cggtgatcgt gccctgggac
     1261 agatgtaacc cgtgatgctc tagctcctga cataagcggt gggtcgggcg gctatagagg
     1321 tatttgtcaa gcaacaccat cgtccacacc gacaccccca acgggctttt cgggatcacg
     1381 cgcggcgccg gcggggccgt cacaatacct gggagctggg cacactcaca cctcttttgg
     1441 tagcgcgggc gatggaggcg ccgaatgtgg gtctgcacct gcacttcgat gatatcgcac
     1501 gcttcgacac ctggaaacgc tgccaacgcc tcgccacatt gcggacagtg tttggccatc
     1561 tcgctcaagt catgaacttc aaccaccacg ggcagaatgg aacgatcact gcggccgtgt
     1621 ccctgagaac ccggttgttg gccccgcttt cgggaat
//
LOCUS       DASQSL010000342         1336 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_43859, whole genome shotgun sequence.
ACCESSION   DASQSL010000342 DASQSL010000000
VERSION     DASQSL010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1336
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43859"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..979
                     /locus_tag="VE844_03415"
     CDS             <1..979
                     /locus_tag="VE844_03415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HZC00429.1"
                     /translation="RFLTEISPFAHIAPMAGALEYQEPGGNRFALGLLQGHVSNQGDA
                     WAYTLNYLERHLETARLKPLDEALAQAEELHAPYLMMMRTLGWRTGELHQALAKETGD
                     AAFDPEPIRPQDLDAWCEWIRNEALYTLDRLPRHMDAIPQHLRPDTELLLNSRTRISD
                     RISALRPVDLQAAKTRYHGDYHLGQVLLAENDFIIVDFEGEPARPLEERRAKHSPLRD
                     VAGMLRSFDYAAYAVLRQITSERPDDSVLLEPIVQAWERFAVNAFLSGYRESISECPS
                     YPIDSGHTSALIDLFTLEKAFYELRYELENRPDWVAIPLKGLHRLLNKI"
     gene            complement(1092..>1336)
                     /locus_tag="VE844_03420"
     CDS             complement(1092..>1336)
                     /locus_tag="VE844_03420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00430.1"
                     /translation="VFWNVNGEEAMPGKDYAVWSSQYGWGYVIGTQGAMFRVKLNVDP
                     GTEPEDYVERKGAGSTLDPPSLYEDQLANRLATIGR"
BASE COUNT          267 a          413 c          368 g          288 t
ORIGIN      
        1 acgctttctc accgagatct cccccttcgc acatattgct cctatggcag gcgccctcga
       61 ataccaagag cccgggggca accgctttgc cctgggtctg ctgcaggggc atgtctcgaa
      121 ccagggcgat gcctgggcct ataccctgaa ctatcttgag cggcatcttg aaaccgcgcg
      181 gttgaaacct ctagatgagg cactggctca agccgaagag ctgcatgcac cctatctgat
      241 gatgatgcgt accttgggat ggcgcacggg ggagttgcat caggccttag ccaaagagac
      301 cggcgatgcc gccttcgatc cggaaccgat ccggccgcag gatctggatg cctggtgcga
      361 atggatccga aacgaagcgc tgtacaccct ggataggctg ccccggcata tggacgcgat
      421 accgcaacac ttgcggcccg acaccgaact gctattgaat tcgaggacac ggatctcaga
      481 tcgcatctcg gcgctgaggc ctgtggatct acaggctgcc aaaacccgct accatggcga
      541 ctaccatctg gggcaagtgt tgcttgcaga aaacgacttt atcatcgtcg acttcgaagg
      601 agagcccgcc cggcccctgg aagagcgccg ggccaagcat tcaccgctgc gagatgtagc
      661 aggcatgctg cgctcatttg actatgcggc gtatgcggtg ctcaggcaga tcacctccga
      721 gcgcccagac gacagcgtcc tgcttgagcc tattgtccag gcttgggaac ggttcgccgt
      781 gaacgccttt ttgagcggtt atcgcgagag tatcagcgaa tgcccgtcct atcccatcga
      841 ttcaggccat acctctgccc tcatcgatct gtttacgctt gagaaggcct tctatgagct
      901 tcgctacgag ctggagaacc gtcccgattg ggtcgccatt ccgcttaagg gcctgcacag
      961 actgcttaat aagatctgac cggatggcag cagctcttgc tcaaacccgg ttgactttac
     1021 cgtccgcgtg gtgccacccc gtcccgatgg ttttagtccg cccagcggtc cggcgggcac
     1081 gctggtgacc atcagcggcc tatcgtagca agccggttgg ctagttgatc ctcatagagt
     1141 gatggcggat caagcgtact tcccgcgcct tttctctcga catagtcttc aggctccgtc
     1201 ccaggatcca cgtttagttt gactctgaac atggcgccct gcgttccgat gacatagccc
     1261 cagccgtact ggctggacca aaccgcataa tccttgcccg gcatggcttc ctctccgttg
     1321 acgttccaga aaaccg
//
LOCUS       DASQSL010000343         1427 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_139929, whole genome shotgun sequence.
ACCESSION   DASQSL010000343 DASQSL010000000
VERSION     DASQSL010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1427)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1427)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1427
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139929"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            92..298
                     /locus_tag="VE844_03425"
     CDS             92..298
                     /locus_tag="VE844_03425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012349183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF433 domain-containing protein"
                     /protein_id="HZC00431.1"
                     /translation="MSDYRERGTIEPGKRGGKPCIRSMRITVYDVLDWLASGGRAKKR
                     RTGSFRVSLRRASLLIALKNEDRE"
     gene            326..1132
                     /locus_tag="VE844_03430"
     CDS             326..1132
                     /locus_tag="VE844_03430"
                     /inference="COORDINATES: protein motif:HMM:NF014670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HZC00432.1"
                     /translation="MIMAVLIASGLEHFVVSAQRAPERRSNGVLLENLTWVEAKDRLS
                     ADTVVVIALGAAAKEHGPHLKLATDWIMAEYFKRRVMERADVVVAPTVNYHFYPAFVN
                     YPGSTSLRQDTARDLIIDICRTLAAHGPKRFYVLNTGVSTQTPLKAAQALLALDGILL
                     RFTDILAVADSVVKAVSEQREGTHADEIETSMMLYIAPDSVDMTKATKDFPTGTGAWT
                     PVKSNTGNYSASGIYGDATLATRAKGEKVVEATIAGILKDIEELRSLRRP"
BASE COUNT          329 a          384 c          425 g          289 t
ORIGIN      
        1 gcgatagaag gatcacgcgg gctggattgg taagccctta taagttaagt tatctaaaag
       61 ataccaacag acgcgaaaag gtaggtattg tatgtccgac tatcgtgagc ggggcactat
      121 tgagccaggg aaacgcggcg gcaagccttg cattcggtcg atgcggatca cggtctatga
      181 tgtcttggat tggttagcat ccggcggacg cgccaagaag cggcgcaccg gtagctttcg
      241 cgttagcctg cgtcgggcaa gtctgttgat tgctctcaag aatgaagacc gggagtgaat
      301 gatgaggtcc gcgtatgtgt cgcgaatgat catggccgtc ttgatcgcat ctgggcttga
      361 gcactttgtg gtctccgccc aacgcgctcc agagagacga tcaaacggtg tgctcctcga
      421 aaacctaacg tgggtcgagg ccaaggatcg gctctccgcc gacactgtgg tggtcatcgc
      481 actcggtgct gcagcgaagg aacacgggcc ccatctcaag ctagctaccg attggatcat
      541 ggccgagtac ttcaaacgcc gcgtcatgga gcgcgccgac gttgttgtcg ccccgacggt
      601 caactaccac ttctatccgg cgtttgtgaa ttatccgggt tcgacgtcgc tcaggcagga
      661 cacggctcgt gacctcatca tcgacatctg cagaacctta gccgcacacg gtccgaagcg
      721 attctatgtg ctgaacaccg gagtatcgac gcagactcca ctcaaggccg cgcaagcgtt
      781 gctcgctctc gacggaatcc ttcttcgatt cacggacatc ctcgcagtgg ccgattcggt
      841 cgtcaaggca gtcagcgaac agcgcgaagg aacccacgcc gatgagatcg agacgtcgat
      901 gatgctctac attgcgccag actccgtgga catgacaaag gcgacgaagg actttcccac
      961 aggcacggga gcgtggactc cggtgaaaag caacaccggc aactattctg ccagcggcat
     1021 ttatggggac gcgactctgg cgacgcgggc taaaggcgag aaagtagtgg aagcaacgat
     1081 tgccggcatt ctcaaggaca tcgaagagct ccgaagcctg cgccggccgt agcgtgcatt
     1141 gcggggattt caggatattc atacgtcgag gcgcaggcta acaaacgaat ggagccgaca
     1201 cggcttggat tctggcgccg cgcggctcat tcgtagtcgt taggcaagag ttgctaatac
     1261 taccccccta gcacccttga gggggaccca gagggggtgg gaattttcgc acaggctcaa
     1321 aagggcgttg aatttccagt taatgagcat tgcagaaatc gccgcaacgc cgtatcgtga
     1381 cacaggacgc attttagagg ttcccgtttg tgccccacac gagaggt
//
LOCUS       DASQSL010000344         2170 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_83906, whole genome shotgun sequence.
ACCESSION   DASQSL010000344 DASQSL010000000
VERSION     DASQSL010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2170
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83906"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            88..936
                     /locus_tag="VE844_03435"
     CDS             88..936
                     /locus_tag="VE844_03435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011715184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HZC00433.1"
                     /translation="MLKHVPPEVWAFDVEWVPDPDSGRRAYGLPPDLADEAVLEYMWK
                     QGGATNADPRPYLKTVLCRVVSIAAVIRKQTDDGGVSLKLHSLPSPDEPDASEPDILR
                     RFLTALGKAKPQLVGFNSQSSDIVILLQRALSNRLALPDFCKRPAKPWEGVDYFARGN
                     DFNIDLKEDLSGWGKATPSLHELATVCRIPGKLGTDGQDVIDLWLAGDVRRIVQYNEC
                     DAITTFLLWLRTALLAGHVTPEQHQREEAQLEALLAERAESPEQRHLADYLAAWRSLR
                     TGQSYD"
     gene            1136..>2170
                     /locus_tag="VE844_03440"
     CDS             1136..>2170
                     /locus_tag="VE844_03440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015186881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HZC00434.1"
                     /translation="MTNDSLTTDGLRAAAAQRRPGAEDTSETAILAKRVMYEGDPMSG
                     EIRYRGNITNLLGYAPEHLAGGFERWLERVHPEDRTAYQKTMAENLALKRPFHRDYRL
                     IHQDGSTVRVQEVGQFRFDQAGNVIGIVGYVTPCVGRGVQTEIERTAAYYRGLAEAAL
                     VMSSTRSLNAIHQIITDQARFIIGAHQAVTSITVGSGWAQAIQALSLSDKYAPWRSYA
                     AVPDGSGVYAMVCKTNHTARMTQAELERHPHWRGFGKEAQAHPPMRGWLAAPLIGHDG
                     KNLGLIQLSDKYQGEFDETDEAILVQLAKLAAVAIENARLLVKLQESEERFCEIAEMS
                     GEWIWEQDPSG"
BASE COUNT          452 a          643 c          647 g          428 t
ORIGIN      
        1 tccatggact tccccaccgc caggccgctt ctaggaagct tcaacggcgg tgatgatgat
       61 gcctttattg tcaagatcaa gtaagcaatg ctcaaacatg tccctcctga agtctgggcc
      121 ttcgatgtcg agtgggttcc ggatcctgat tccggccgac gcgcctacgg ccttccgccg
      181 gaccttgccg atgaggccgt ccttgaatac atgtggaagc agggtggcgc caccaacgct
      241 gatcctagac cttacctcaa gacggttctg tgccgcgtgg tctcgattgc agccgtcatt
      301 cgtaagcaaa ctgacgatgg tggtgtgtcc ctcaagcttc attcactgcc atcaccggat
      361 gaaccagacg ccagcgaacc cgacatactc aggcgctttc tcacggctct cggtaaagca
      421 aagccacagc ttgtaggctt caattcacag tcatcggaca ttgtcattct gctgcaacgc
      481 gctttgtcca accgcttagc cctccctgat ttctgcaagc ggccggctaa accttgggag
      541 ggggtcgatt acttcgcacg cggaaatgac ttcaatatcg atctcaagga ggatctgagc
      601 gggtggggca aagcgacgcc aagccttcat gagctggcga ctgtatgccg cattccgggg
      661 aagctcggga cagatggtca agatgtgatc gacctctggc tcgccggcga tgtccgccgt
      721 atcgtgcaat acaacgaatg cgacgccatt accacgtttc ttttgtggtt gcgcaccgcg
      781 ctcttggcgg ggcatgtcac gcccgagcag catcagcggg aggaagccca gcttgaagcg
      841 ctcctggcgg aacgagcgga atcgccggaa cagcggcacc tagccgatta tcttgctgct
      901 tggcgctcac tgcgcaccgg ccagtcctac gattgaaacc agaactcacg gaccttagat
      961 actgtcttag caggtagcgc ccggccttcg gtcgggcgag gattgaaacg cactgctgaa
     1021 cttgtttgtc ctcctgtaca tcgactatcc tttgattcat tagaaccgca aaagaaccgc
     1081 aaactggttt gattgggcgc tcttggcctc gagcgggagg aaggagtaat ccgccatgac
     1141 gaatgatagc ttgacaaccg atggtttacg ggctgccgct gcccagcgac ggccaggcgc
     1201 agaagacacc tccgagacgg cgatccttgc caagcgcgtc atgtatgagg gcgatcccat
     1261 gagcggtgag atccgctacc gggggaacat tacaaatctg ctcggatacg cgcccgaaca
     1321 tctggccggc gggttcgaac gctggctcga acgggtccat cccgaggacc gcacggctta
     1381 tcagaagacc atggccgaaa acctcgcctt gaagcggcca ttccataggg attatcgcct
     1441 gattcatcag gacggctcca cagtccgggt ccaggaggtg ggccagtttc gcttcgacca
     1501 ggcagggaat gtgatcggca tcgtcggtta cgtgacgcca tgcgtcggcc ggggcgtgca
     1561 gacggagatc gagcggacgg ccgcgtatta tcgtggcctg gccgaggccg ccctggtcat
     1621 gagctcgacc cgctccttaa acgcgatcca tcagatcatc accgaccaag cccgcttcat
     1681 catcggcgcc catcaggcgg tgacaagtat caccgtgggc tcgggctggg cacaggccat
     1741 ccaggccctg tcgttgagcg ataagtatgc gccgtggcgg agctacgccg cggtgccgga
     1801 cggctcgggc gtctatgcga tggtctgcaa gaccaatcac accgcccgca tgacccaggc
     1861 tgagctcgag cgccatccgc attggcgcgg cttcggcaag gaggcccagg cccacccgcc
     1921 gatgcgcggc tggctggccg cgccccttat cggacacgac ggcaaaaatc tcggtcttat
     1981 ccaactctcg gataaatacc agggcgagtt cgatgagacc gacgaggcga tcttggtgca
     2041 gcttgccaag ctggcggcgg tggcgattga gaacgcgcgg ctcctggtca aactgcagga
     2101 aagcgaagaa cggttttgcg agatagctga aatgagcggc gaatggatct gggagcagga
     2161 tccttccggg
//
LOCUS       DASQSL010000345         1012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_139950, whole genome shotgun sequence.
ACCESSION   DASQSL010000345 DASQSL010000000
VERSION     DASQSL010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139950"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..280
                     /locus_tag="VE844_03445"
     CDS             <1..280
                     /locus_tag="VE844_03445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00435.1"
                     /translation="DNVDQREIVLYTRDRSLRCWRARRFLGHTGYRFEVVDSTTEDPG
                     VFAELSEGFNCEMVAPYVFVDHRPVGGLGTVRALVGSGQFEHLVRGEL"
     gene            complement(794..940)
                     /locus_tag="VE844_03450"
     CDS             complement(794..940)
                     /locus_tag="VE844_03450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00436.1"
                     /translation="MVSKNTRRAIPLVSATLTIVGSVIVSITTIATNTDSLLRIAPSF
                     APVG"
BASE COUNT          220 a          260 c          307 g          225 t
ORIGIN      
        1 agacaacgtg gaccagagag agatagtgct ctacacgcgg gaccgctcgt tgcgctgttg
       61 gcgagcgagg cgcttcctcg ggcacaccgg ataccgcttc gaggtggtcg actccaccac
      121 cgaggaccca ggggtgttcg ccgagctctc ggaaggcttc aactgcgaga tggtggcgcc
      181 atacgtgttc gtcgatcacc gtccagtagg aggcctgggg acggtgaggg cgctggtagg
      241 ctcaggccaa ttcgagcacc tggtgcgggg cgaactgtaa gccccttctc tatacacccg
      301 aggagtgcgt ggaacaggaa ttctcggaag ttcgccagca aaattgcgat aaatgtttct
      361 tgaagctttg agggatgcct atggggatac gctctgctta tcggcttgca accgtgacac
      421 cgcgtctagt attcgctgtg caaaggtgtt agcgtgaaac taagaccagc gttctcggag
      481 ggggaaatga gaacgctggc gaattgaggg gcgtctcttg taagagacgc tccttttact
      541 agtgtacgcg ggcaggatgg aaaagtctgt agctttttta cctctaacta tggtcgaggg
      601 tctttcgaac ggttcgaagc aggagtagag gcgagtttta tccatcaacg tcgtggaaca
      661 ggaattctcc gaagttggca acgccaagca acactcaagc aacgccaaac atagtccata
      721 ttagtgaggt gctgaccctc acaagcctgt tatcctgctc tcgttacata acggggcggg
      781 ggtatcgccc ccctcatccc actggagcga aggagggagc gatgcgcagg aggctatcgg
      841 tgttggtggc tatggtggtg atgctgacga tgacgctgcc gacgatagta agcgtcgcac
      901 tcaccagggg tatcgcccgg cgggtgttct tgcttaccac tgctgagaag cttccttccc
      961 tgggaaattc ccaatgtgcg ccctacccat actacatgcc tttctcctaa cg
//
LOCUS       DASQSL010000346         1099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_180713, whole genome shotgun sequence.
ACCESSION   DASQSL010000346 DASQSL010000000
VERSION     DASQSL010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180713"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1099)
                     /locus_tag="VE844_03455"
     CDS             complement(<1..>1099)
                     /locus_tag="VE844_03455"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HZC00437.1"
                     /translation="DGFSLFFKVLFLLVVALTILISPRYLIIEDMPAGEYYALILFST
                     IGMMIMAAGVDLLAIYIGLELMSLSIYALAGFVKRDPKSIEAALKYFLMGSFSSGVLL
                     YGLALLYGLTGTTQLNAIAAQAGTLSTNPVLILAIVLLVGGFGFKIAAVPFHMWAPDV
                     YEGAPHSVVGFVSVGSKAAAFAAVIRIFLVALGPSKAQWEPMLWAISMLSMIIGTVVA
                     IAQTNIKRMLAYSSIASAGYMLIGIIAGTEIGLASVLVYAMAYVFMNVGAFALVVLLC
                     RRGERGDTIAEFTGLARVTPVASASLVIFFLSLTGLPPTAGFVGKFYLFAAAIQTGYI
                     GLAVVGVLSSAISLYYYFSVVMSMYMQDAPKE"
BASE COUNT          309 a          314 c          280 g          196 t
ORIGIN      
        1 gctctttggg agcatcctgc atatacatgg acatgacgac gctgaaataa tagtacagag
       61 atatcgcact actgaggaca cccacaacgg ccaaaccgat atatcctgtc tgtatggctg
      121 cggcaaagag gtaaaatttc ccgacaaagc cagctgttgg tggcaaccca gtgagtgaca
      181 ggaaaaatat cactaaagac gctgaagcca ctggcgtcac acgtgctaac cccgtaaact
      241 ctgcgatcgt atcaccgcgt tccccccgcc gacacagtaa gacgaccagc gcgaacgctc
      301 caacattcat gaagacatag gccatggcgt acaccagcac actggccaga ccgatctccg
      361 tcccggcgat aattccgatc agcatatacc ctgcactggc gatgctcgag taggccaaca
      421 tgcgcttgat gttcgtctgc gcaatggcca cgacagtacc aataatcata ctgagcatcg
      481 aaatggccca cagcatcggc tcccactgcg ccttgcttgg tcctaaggcg accaagaaaa
      541 tgcgaatgac ggcggcgaag gctgccgctt tcgatccgac cgagacgaaa ccgacgaccg
      601 aatgcggggc tccttcatag acatcgggtg cccacatgtg gaatggcacc gcggcgattt
      661 tgaacccgaa ccctcccacc agcaagacaa tggccaagat caatacggga ttggtactca
      721 aggtacccgc ttgcgcagcg atggcattga gctgggttgt accggttaat ccgtacagga
      781 gagcaaggcc gtacaggagc acgccagacg agaagctccc catgagaaaa tacttcagcg
      841 ccgcctcaat ggatttggga tcgcgcttga caaaaccggc taaggcgtag atcgacaggg
      901 acatcaattc aaggccgatg tagatggcca gcagatccac acccgcggcc ataatcatca
      961 tcccaatggt cgagaacaga ataagcgcgt agtactcgcc ggccggcata tcctcaatga
     1021 tgaggtatcg cggtgaaatc aggatcgtca aggctaccac cagcaggaaa agtactttga
     1081 agaacaggct aaaaccgtc
//
LOCUS       DASQSL010000347         1181 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_126366, whole genome shotgun sequence.
ACCESSION   DASQSL010000347 DASQSL010000000
VERSION     DASQSL010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1181
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126366"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1181)
                     /locus_tag="VE844_03460"
     CDS             complement(<1..>1181)
                     /locus_tag="VE844_03460"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HZC00438.1"
                     /translation="PKIRAADVLNEQAEYDPTTFAGFRYSGGKEHLAGAPTRWPPDRT
                     AKVRIATPFAGIEQRLQTGTRVNLQLSQEHITSNETGSTSRFIEPSDELRTTLSLTQP
                     ILRNFGFDVNRTRIRIAETDQEISEHSLKDRVIRVVSRVEELYWDLVFRIQELGVRRL
                     SLKLAQDLLAQTRVQVAVGTQPQLSILEGEAGVAAREEAVIVAENNVHTVEDQLKELL
                     SLFEDSQRRGLTIVPTDAPRFAIEEIALEKALEEAFEFRPDYRQAKLEIELRTLNERF
                     RRNQLLPTLDLEGRVGLNGLDDNLGDSFNHFTSGNWVQYQVGFTLRYPLGNQASKSRF
                     TRARLEVQQANAILERTEQRILVEVREAVRNVETNVKRVSVTRGARELAQKKLEAEEK
                     K"
BASE COUNT          234 a          328 c          340 g          279 t
ORIGIN      
        1 aattttttct cttcggcttc gagttttttt tgcgcgagtt cgcgggcccc acgcgtcacg
       61 ctgacccgtt tgacgttagt ttcaacgttg cggaccgctt cgcgaacctc gacgaggatc
      121 cgttgctccg ttcgctcaag tatcgcgtta gcttgttgca cctccagccg ggcccgggta
      181 aatcgactct ttgaggcttg attccccaag ggataccgca gggtgaagcc cacctgatac
      241 tgcacccaat tcccagaggt gaaatggttg aaagaatccc ctagattgtc atcgagcccg
      301 ttcagcccga cgcgcccctc aaggtccagg gtcggcaata attggttgcg tctgaagcgc
      361 tcgttcagtg tgcgcaattc gatttccagt ttcgcctggc gataatcggg gcgaaattca
      421 aaggcttcct ctaaggcctt ttcaagcgcg atttcctcaa tggcaaaccg tggagcatcg
      481 gtgggaacga tggtcagtcc cctgcgttgg ctatcctcga aaaggctgag aagttcctta
      541 agttgatctt cgaccgtgtg cacattgttc tccgcgacga tcaccgcctc ttcgcgtgcc
      601 gccaccccgg cctcgccttc gagaattgaa agctgcggtt gggtgccgac agcgacctgg
      661 acgcgcgtct gcgctagcag atcctgagca agcttgagtg ataaccgccg gacccccagc
      721 tcctggatgc gaaagaccaa gtcccagtag agttcctcga cacgggaaac aactctaatg
      781 acccggtcct tgagtgaatg ttccgagatc tcttgatcag tctcggcaat gcggatgcgt
      841 gtgcggttta cgtcgaaccc aaaattacgc aaaatcggct gcgtcagcga caaggtggtg
      901 cgaagctcat ctgaaggttc tataaagcgg gaggtgctcc cggtttcgtt cgaggtgata
      961 tgctcttgag ataattgtag attcacccgc gtgccagtct ggagacgctg ttcgatgcca
     1021 gcgaaggggg tagcgatgcg aaccttcgcc gtgcggtcgg gtggccagcg tgtaggcgca
     1081 ccagcgaggt gctctttccc gccgctatag cgaaacccag caaaggtggt ggggtcgtat
     1141 tcggcctgtt cgttgaggac gtcggcggca cgaatcttgg g
//
LOCUS       DASQSL010000348         1808 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_28899, whole genome shotgun sequence.
ACCESSION   DASQSL010000348 DASQSL010000000
VERSION     DASQSL010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1808
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28899"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            148..777
                     /gene="purN"
                     /locus_tag="VE844_03465"
     CDS             148..777
                     /gene="purN"
                     /locus_tag="VE844_03465"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012522155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HZC00439.1"
                     /translation="MNLGFLASGRGSTMQAVIDACKSGRLRAKPCVVISNNRDAQALA
                     RAWQEGIPAYHLSAKTEPNPGLLDAAILHTLQHHEVELVILAGYMKKLGMKTLEHYRG
                     RILNIHPSLLPKFGGQGRYGIHVHEAVLAAGERETGATVHLVEGEYDQGTILSQCRVP
                     VYTGDTADTLAQRVLVQEHRLLVETLEQILVGKLALPEVLSCPQLMQRP"
     gene            complement(733..1710)
                     /locus_tag="VE844_03470"
     CDS             complement(733..1710)
                     /locus_tag="VE844_03470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020593153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0016653 - oxidoreductase activity, acting
                     on NAD(P)H, heme protein as acceptor [Evidence IEA];
                     GO_process: GO:0006784 - heme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="COX15/CtaA family protein"
                     /protein_id="HZC00440.1"
                     /translation="MIVAIVMIGGVTRLTHSGLSIVEWKPLAGVLPPLSQADWETAFR
                     HYQHYPEYKKLNPDMTLEGFKAIFWLEYLHRLWGRLIGLVFLLPLLYFLVKGRIGKAL
                     LPRLIIMLMLGGLQGVLGWYMVMSGLVDRPDVSQYRLTAHLGLAFLIYGYIFWVALGL
                     LHPQPHYGDWRGLRRAVGGLLGLIFITVLSGGFVAGLDAGFAYNTFPLMGGRLIPQGL
                     FSLEPLPRNLFEDLTTVQFNHRSLAILSVLTTASVWVGSLTVPLPRRTRLALHTLIAA
                     AVGQVSLGIATLLWVVPLPLALAHQAGALVLFTATLWALHELRAAKNLR"
BASE COUNT          422 a          503 c          562 g          321 t
ORIGIN      
        1 ggcgttctga atcacaccct gctcaggctt cccgataaag ctttggagag cctggagtcc
       61 gggcttaccg agatcgtgaa caacatgaac ctcaaggatg agtcggcggc actcaagccc
      121 ttgacggaat aaaaacctgc aaggggaatg aatctcgggt ttctcgcctc gggccgtggc
      181 agcactatgc aggcggtcat cgatgcgtgt aaaagcgggc gtcttcgggc caaaccctgt
      241 gttgtgatca gcaataaccg cgatgcgcaa gccttagcgc gggcatggca ggaagggatc
      301 ccggcctatc acctgagcgc caagacggag cccaatcccg gcttgctcga tgcagcgatc
      361 ctccataccc ttcagcacca tgaggtggag ctcgtgatcc tcgcaggtta tatgaaaaag
      421 ctcgggatga agaccctcga gcactaccgg ggccggatcc tcaatatcca tccgtcgttg
      481 ctgcccaaat ttgggggcca gggcaggtac gggatccatg tgcacgaagc cgtcctggcc
      541 gccggggaga gagaaacggg agcgaccgtc catctcgtcg aaggtgagta tgatcaaggg
      601 actatcctca gccaatgccg ggtgccggtt tacaccggcg atacagcaga cacactggct
      661 cagcgtgtgc ttgtacaaga gcatcggcta ctggtagaga ccctggagca gatcctcgtg
      721 gggaaactgg ctttacctga ggttcttagc tgcccgcaac tcatgcagcg cccataaggt
      781 cgctgtgaag aggacgagcg ccccagcctg gtgagccaaa gccaagggta gcggcactac
      841 ccacagcaag gtcgcgatcc cgaggctgac ttggccgacc gccgccgcta taagcgtatg
      901 caaggccagc cgagtccgcc gcggtagggg tacggtcagc gatcctaccc ataccgaggc
      961 cgtggtgagc acgctcagga tcgcgagcga gcggtgattg aactgcacgg tggtcagatc
     1021 ctcaaagagg ttcctcggta gtggttcgag ggagaatagg ccttggggga tcaggcgccc
     1081 gcccatgagg ggaaaggtgt tataggcaaa gcctgcgtct agcccggcta caaagccgcc
     1141 tgagaggaca gtgataaaga tgagcccaag caagcccccg accgcccggc gcagacctcg
     1201 ccagtcgcca taatggggct gtgggtgaag gagtcccagc gccacccaaa agatatatcc
     1261 gtagatcaga aaggccagcc caagatgcgc agtgagacgg tattggctca catcgggccg
     1321 gtcgacgagc ccgctcatca ccatatacca gccgagcacc ccttgcagtc ccccgagcat
     1381 cagcatgatg atcaacctcg gcagcagcgc cttgccgatc cgacctttga ccaggaaata
     1441 gagcaatggc aacagaaaca cgaggccgat cagacggccc cagaggcggt ggaggtattc
     1501 aagccagaag atggccttga atccctcgag cgtcatgtcg gggttgagtt ttttatattc
     1561 agggtagtgc tgatagtgac ggaaggccgt ttcccagtct gcttgagata agggcggcag
     1621 cacccctgcc aacggtttcc attcgacgat ggagaggcca gaatgggtga gccgggtgac
     1681 gccaccgatc attactatgg cgacgatcat cgcgcaacag atgaatagcc agagagcgat
     1741 aggccgcgat gcttggatgt gtaggggtac ctttaccctt tccaggggga gggttaaggg
     1801 agggggta
//
LOCUS       DASQSL010000349         3288 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_97884, whole genome shotgun sequence.
ACCESSION   DASQSL010000349 DASQSL010000000
VERSION     DASQSL010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3288)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3288)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3288
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97884"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            152..673
                     /gene="aroK"
                     /locus_tag="VE844_03475"
     CDS             152..673
                     /gene="aroK"
                     /locus_tag="VE844_03475"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014704345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase AroK"
                     /protein_id="HZC00441.1"
                     /translation="MLENSGNIFLVGPMGSGKTTVGRQLAKHLDRTFYDSDHELEHRT
                     GARIALIFEIEGEAGFRRREKKLIEELTQLQNIVLATGGGAVLDEDNRRCLKQRGFVV
                     YLRAPVTRLFARTHRDHSRPLLQTNNPYSKLEEIVKQRDPLYRQVADLITDTDHRTIR
                     QVVEEITKIWKSP"
     gene            670..1764
                     /gene="aroB"
                     /locus_tag="VE844_03480"
     CDS             670..1764
                     /gene="aroB"
                     /locus_tag="VE844_03480"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008290485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HZC00442.1"
                     /translation="MKILYVELGDRRYPIYIGQDLLEQGDLFSAFIRGRQILIVTNDR
                     VAPLYLDKLKQALAAYDTHAIILPDGEEYKTLEMLERIVTALLEHRFDRGCTLVALGG
                     GVIGDIAGFAAACYQRGVDYVQVPTTLLAQVDSSVGGKTAVNHFLGKNMIGAFHQPLG
                     VVADTATLATLDDRQFCAGLAEVVKYGLIRDAEFFAWLEEHMAKLLDREPWALAYAIE
                     RSCRNKAIVVAADERESGLRAMLNLGHTFGHAIETGLGYGRWLHGEAVAVGIAMAADL
                     SARIGWLDERSVARIGSLLDQARLPIKAPAELSTERMIGLMAVDKKARGGTIRLVLLE
                     AIGRAIVTGYYDPVALKSTLVQCRSIAARA"
     gene            1737..2915
                     /locus_tag="VE844_03485"
     CDS             1737..2915
                     /locus_tag="VE844_03485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009207291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016793 - triphosphoric monoester
                     hydrolase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyguanosinetriphosphate triphosphohydrolase"
                     /protein_id="HZC00443.1"
                     /translation="MPLDSCQGLVRSRAPYAVSEAQSQGRLYPEPPPAYRSEYQRDRD
                     RIVHCSAFRRLEYKTQVFVNHVGDMFRTRLTHSLEVAQIARTLARALGLNEDLTEAIA
                     LAHDLGHTPFGHAGQHALNSCMREYGGFEHNLQSLRIVDCLEQRYADFEGLNLTFETR
                     EGVLKHCPRAKAPELGALGQRFLLGKQPSLEAQIANVADEIAYNNHDIDDGLRSGMLD
                     LEPLCALRLFKEKYSETVSRYLGLPKKRIVYEVVRRMIGHQVAALIEASQANIAALSP
                     NSVEDVRNAGRPLIAFGEDMHEKHLELGRFLRQHLYQHYRVRRMSAKAARIIQELFEA
                     FMQDPGLLPPEAQVKAAAQGEGDPKMHRARAIADYIAGMTDRYAILEYRRVLSPADLI
                     "
     gene            2970..>3288
                     /locus_tag="VE844_03490"
     CDS             2970..>3288
                     /locus_tag="VE844_03490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011586667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HZC00444.1"
                     /translation="MLTHNLGYPRIGSHRGLKHALEQYWSGTLSLETLLQAGKILRRD
                     QWLLQKEAGIDLIPCNDFSFYDQVLDMSLTVGAIPKRYEPLQTDPKFTELDLYFAMAR
                     GYQR"
BASE COUNT          712 a          921 c          942 g          713 t
ORIGIN      
        1 atgactcaat ctcgcgtgtc aagtctataa atagtatacc acgcgctcag gggccattat
       61 ggatgatatt ctattctcca tacgatcggg attgggaagg caggccaatg cggaggcggc
      121 aaaaaagcgg cgataggaat aaataagatt aatgttggaa aactcgggta atatcttttt
      181 ggtgggtccg atgggatcag gcaagactac cgttgggcgc cagcttgcca aacacttgga
      241 taggaccttc tatgacagcg atcatgagct cgagcatcgc accggggcca ggatcgcgct
      301 catcttcgag atcgaaggcg aggccggttt ccggcggcgc gaaaaaaaac ttattgagga
      361 gctaacccaa ttgcaaaata tcgtgttggc cacaggcggt ggtgcggtac tcgatgaaga
      421 taatcgccgt tgtctcaaac agcgaggttt tgtcgtttat ctccgggcgc cggtaacccg
      481 actgtttgca cgcacccata gggatcacag ccgcccttta ctgcagacca ataatcccta
      541 ttccaagctc gaagaaatag tcaagcaacg cgatcccctg tatcggcagg tggccgatct
      601 gataaccgat accgaccatc gcaccatacg gcaggtggtc gaggagatca ccaagatctg
      661 gaaaagccca tgaagatctt atacgttgag cttggcgacc gccgttatcc catctatatc
      721 ggtcaagatc tgcttgaaca gggtgatctg ttctctgctt ttatccgggg ccgccagatc
      781 ctgatcgtga ccaatgacag ggtggcccca ctttatctcg acaaactcaa acaggcgctc
      841 gccgcctacg atacgcacgc tatcattctg cccgatggcg aagaatacaa gacgctcgag
      901 atgctggaga gaatcgtcac cgccttgctg gaacatcgct ttgatcgggg ttgcaccttg
      961 gtagccttgg gtggtggcgt gatcggtgat atcgcaggat ttgccgccgc atgctaccag
     1021 cgtggtgtcg actacgtgca ggtccccacc accttgttgg cccaggtgga ttcctcggtg
     1081 ggtggtaaga ccgcagtcaa tcacttcttg ggcaagaata tgatcggcgc tttccatcag
     1141 cccctgggcg ttgtcgccga cacggctaca ctcgctacgc tcgatgaccg gcagttctgt
     1201 gccgggctgg ctgaagtcgt aaaatatggc ttgatccgcg atgcagagtt ttttgcgtgg
     1261 ttggaagagc acatggccaa actcctcgac cgcgaaccct gggccttagc ctatgccatc
     1321 gagcggtcgt gccgaaacaa ggcgatcgtg gtggcggccg atgagcggga gtcgggcttg
     1381 cgcgcgatgc tgaatctcgg gcataccttt ggccatgcga tcgagacggg gctcggttat
     1441 gggcgctggc tgcacgggga agcagtggcg gttggcatcg ctatggccgc cgatctctcg
     1501 gcccgcatcg gatggctcga tgagcgctcg gtcgcgcgta tcggatccct gttggaccaa
     1561 gcccgcctac cgatcaaagc acccgctgag ctcagcacgg agcggatgat agggctgatg
     1621 gcggtggata agaaggcacg aggggggacg atccggctgg tattgctcga agccattggc
     1681 cgggctattg ttaccggtta ttatgatccg gtcgctttaa agagcacctt agtgcaatgc
     1741 cgctcgatag ctgccagggc ttagtccgat cacgcgctcc ttacgccgtc tccgaggccc
     1801 aatcgcaggg gcgcctctat cctgagcccc cacccgccta tcgcagcgag tatcagcggg
     1861 atcgggaccg gatcgtccat tgttccgcct tccgccggct cgaatataag acccaggtgt
     1921 ttgtcaacca tgtgggagat atgttccgga cccggctcac tcattcgctg gaggtcgccc
     1981 agatcgcccg caccctggcc cgtgcgctcg gtctcaatga ggatctcacc gaggccattg
     2041 cgctcgccca cgatctcggc catacgccgt tcggccatgc cggtcaacat gccttaaaca
     2101 gctgtatgcg ggagtacggt ggttttgaac acaatctgca atccttacgg atcgtggact
     2161 gcttggagca gcggtatgcc gacttcgagg gtttgaatct cacctttgaa acccgcgaag
     2221 gtgtcttaaa acactgtccc cgcgccaagg cgcccgaatt aggcgcgctc gggcagagat
     2281 ttcttctggg taagcaacca agccttgagg cgcagatcgc caatgtcgcc gacgagatcg
     2341 cctataataa tcacgatatc gacgatggcc tgcgctcggg gatgcttgat ctcgagccgc
     2401 tctgtgcact gaggctcttc aaggaaaagt attccgagac ggtttcccgc tatctggggc
     2461 tgccgaaaaa gcgcatcgtt tatgaggtgg tccggcggat gatcggccac caggtggcgg
     2521 cattgatcga ggccagccaa gccaatatcg ctgccctatc tcccaacagt gtcgaggatg
     2581 tgcgtaatgc gggccgtccc ttgatcgcct ttggcgaaga tatgcatgag aagcacctgg
     2641 agcttggccg atttttacgc cagcacctct atcagcatta tcgcgtgcgc cgcatgtcgg
     2701 ccaaagcggc tcgcattatt caggaactct tcgaggcttt tatgcaggat cccgggctgc
     2761 tgccccccga ggcgcaggtc aaggcggccg ctcagggaga gggagacccc aagatgcatc
     2821 gtgcccgcgc cattgccgat tatattgcgg gcatgacgga ccggtacgcg attctggaat
     2881 atcgaagggt cctcagtccg gccgacttga tttgagtgcg cgagatcaaa acacgcactc
     2941 cacttcacta tttcaacgag aggtgaacta tgctcacaca caatctcggc tatccgcgca
     3001 ttggtagcca cagaggactg aaacacgcat tagaacaata ctggtcggga acgctcagcc
     3061 ttgagaccct cttacaggca ggtaaaatcc tgcgccggga ccaatggctg ctccaaaaag
     3121 aggctggtat cgatcttatc ccctgcaacg atttctcctt ctacgaccag gtgctcgata
     3181 tgtcgctcac cgtcggggca atccccaaac ggtatgagcc gcttcaaact gaccccaagt
     3241 tcaccgagct agatctgtat ttcgcgatgg cgcgaggcta tcagcggg
//
LOCUS       DASQSL010000350         3839 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_57635, whole genome shotgun sequence.
ACCESSION   DASQSL010000350 DASQSL010000000
VERSION     DASQSL010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3839
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57635"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..734
                     /locus_tag="VE844_03495"
     CDS             <1..734
                     /locus_tag="VE844_03495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012033277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZC00445.1"
                     /translation="FLFDDEQAMVRLDMSEYQERHTVARLIGAPPGYVGYEEGGQLTE
                     AVRRRPYSVVLFDEIEKAHPEVFNTLLQVLDDGRLTDGQGRTVNFTSTVIIMTSNIGS
                     HWIKELGVEAAQERVMEEMNRHFRPEFLNRIDEVILFQALTREHLQQIVDIQLGKIKK
                     FLTQRHIQLEITAEVKMRLAEEGFDPVLGARPLKRVIQRRIQNQLAMRILKGEVKEGD
                     RVIVEVAPSGELVFQREPAAEAVAA"
     gene            948..1862
                     /locus_tag="VE844_03500"
     CDS             948..1862
                     /locus_tag="VE844_03500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015190305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HZC00446.1"
                     /translation="MPAFRALRCALSQAKVTLIGLPWAKSFVSRFNRYLNDFVAFPGY
                     PGLPEQAPRIDEIPDFLSSLQRRRFDLVIQLHGSGAQTNAITALFGAKRSAGFYPKEA
                     YCPDPQAFLPYPEEEPEIWRNLRLLEFLGVPLEGDHLEFPLSQEDYLELNALPQTQGL
                     RPREYVCIHPGARWAYKRWPAERFAAVADALNALGLKIVLTGCAQEAHLTQAVGRAMK
                     RPYIDTASPISIGGLAALLMNARLLVSNDTGVAHLAPALQLLSVVIFFSTDPRRWAPL
                     NTALHRTIYDPAGVSVESVLREALDLLR"
     gene            complement(1920..3005)
                     /locus_tag="VE844_03505"
     CDS             complement(1920..3005)
                     /locus_tag="VE844_03505"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019142569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HZC00447.1"
                     /translation="MFRDSYPVIPEVRKIAVLRANLLGDLVFTLPALEALKQTHPEAE
                     ITLLGKPWHAEYLSHRLGPVDRVVVIPRVRGLGEPLDCVENADELERFFARMNEERFD
                     LAIQLHGGGLHSNPFVRRLGARVTVGLKTKDAIALDRSLPYAYYQHEILRLLEAVALA
                     GAKARIIEPRIYVTERDLKELEEKLKLPDAPLVVLQPGATDARRCWPPSSFAAVGDVL
                     IEKGACVAINGTALERPIVEAVMGEMKHKALDASGLLSLCGLTGLLSRACLIVSNDTG
                     SLHLAQAVGTATVGIYWFTNLLLEGSFTKARHRHVLSTRIHCPICGKVNVNERCKHQD
                     SFVADVTVEEVAALAIELFESERHRKR"
     gene            complement(3043..>3839)
                     /locus_tag="VE844_03510"
     CDS             complement(3043..>3839)
                     /locus_tag="VE844_03510"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017318348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family A protein"
                     /protein_id="HZC00448.1"
                     /translation="ALAATLIALCSQTFRDFRVVISDQTETEDTTEKGEVKAARRILR
                     AHGHEMEIHRHLPRRGMAEQRQFLLERVSAPYALYLDDDVIVEVDLVERLHRAIRDEG
                     CGFVGSAVIGLSFIDDVRPHEQAIELWEGRVTPEEVRPATEKWQRHRLHNAANLYHVQ
                     QRLGITAQNQRLYRIAWVGGCVLYDVEKLRAVGGFHFWKRLPVNHCGEEVLAQIRVMA
                     RYGGCGLIPSGAYHQELTTTVKEREVDAPKVLDLYPAASELEGAQC"
BASE COUNT          765 a         1157 c         1131 g          786 t
ORIGIN      
        1 agttcctgtt cgatgatgag caggccatgg tccgtctgga catgagcgaa taccaggagc
       61 gccataccgt ggcgcggctc atcggtgcgc cgccgggcta tgtgggctac gaggagggcg
      121 gtcaactcac cgaggcggtg cggcggcggc cttacagcgt ggtgctgttc gatgagatcg
      181 agaaggccca tccggaggtc ttcaacaccc tgctccaggt cctcgatgat gggcggctga
      241 cggacggcca gggtcgtacc gtcaacttca cgagtacggt tatcattatg acctcaaaca
      301 tcggcagcca ctggatcaag gaactgggcg ttgaagccgc ccaagaacgg gtgatggagg
      361 agatgaaccg gcattttcgt cccgagtttc tgaaccgcat agacgaggtc atcctcttcc
      421 aggccttgac ccgggaacat ctgcaacaga tcgtggatat ccagctcggt aagatcaaaa
      481 agtttttgac gcaacggcac atccagctag agatcactgc ggaagtgaag atgcgccttg
      541 ccgaagaagg gtttgatccc gtgttgggtg cacggcccct caagcgtgtg atccagcgtc
      601 ggatccagaa ccagctggcc atgaggatct tgaagggtga ggtcaaagag ggcgatcggg
      661 taatcgtaga ggtggcacct agcggtgagc ttgtcttcca gcgcgagccg gctgcagagg
      721 ccgtggcagc gtaaactatc gtgcacgcac gccaccccgc ttaccttcga tgtgccggtc
      781 atggcggcgt ggtctggtgg tcagccactt ggaaggcgta gtgttactgc tcgcctacgc
      841 gggttttctg gagggtaaat ggagcggtcc tcacggatct aaaaagcgag aaacctcgat
      901 cgatcgccat cttcagggcc ctgcaactcg gcgacctgct ctgtgctgtg cccgcgtttc
      961 gcgccttgcg ctgcgcgctt tctcaagcca aagtgacgct catcgggctg ccctgggcca
     1021 aaagcttcgt ttccaggttt aaccgttatc tcaacgattt cgtagccttc cctggttatc
     1081 ccgggcttcc ggaacaagcg ccccgcatcg acgaaatccc ggatttttta agcagccttc
     1141 agcgaaggag gttcgatctt gtgatccagc ttcacgggag cggcgctcag acgaacgcga
     1201 tcacagcgct cttcggcgcc aagcgcagcg ccggttttta cccaaaggaa gcttattgcc
     1261 cggatccgca agcattcctg ccgtatccgg aagaagagcc cgagatatgg cgcaatctgc
     1321 gcctgcttga attcctcgga gtaccccttg agggcgatca tctcgaattc ccgcttagcc
     1381 aagaggacta cttggagctg aacgcgcttc cgcaaacgca ggggttgagg ccgcgagaat
     1441 acgtatgcat tcacccgggc gcgcgatggg cgtacaagcg ctggccggcg gaacgttttg
     1501 cggcggtcgc tgatgcactt aatgcgcttg gattgaagat tgtcctgacg ggctgcgcgc
     1561 aggaagcgca tcttacgcag gcggtaggaa gggcgatgaa aaggccttat atcgacaccg
     1621 ccagcccgat ttcgattggg ggactggcgg cgctgctcat gaacgcgcgc ctgcttgtaa
     1681 gcaacgatac gggagtcgcg cacctcgccc cagcgcttca gcttctgagt gtcgtcatct
     1741 tcttctcgac cgatccccgc cgttgggctc cgcttaacac cgcacttcac cgcaccatct
     1801 acgatccggc cggcgtttcg gtcgaatccg tgcttcgcga ggctttggac ctgcttcgtt
     1861 aaccaccccg cccgaccact cacgagtggc tgtgcacgat aaaattcagc tcggtcctat
     1921 cagcgcttcc gatgtctttc cgattcgaaa agctcgatgg cgagggcggc gacttcttcg
     1981 accgtgacgt cggcgacgaa ggaatcctgg tgcttgcagc gctcgttcac attgactttt
     2041 ccacatatcg ggcagtggat ccgggtcgag agcacgtgcc tgtgcctcgc cttggtgaac
     2101 gacccttcga gcaagagatt cgtgaaccag tagatgccta cggtcgccgt gccgacggcc
     2161 tgcgcgagat gaagcgaccc ggtatcgttg gagacgatga ggcaggctcg tgaaagcagg
     2221 cccgtgaggc cacaaaggga aaggagacca gacgcgtcta gcgccttgtg tttcatctcg
     2281 cccattacgg cctcaacgat cggccgctcc agcgctgttc cgttaatcgc gacgcacgcg
     2341 cctttctcga tcaggacgtc gcctacagcg gcaaaactgg agggcggcca gcatcttctc
     2401 gcgtcggttg caccaggctg caggacgacg agcggtgcat ccgggagctt aagcttctct
     2461 tcgagctcct tgagatcgcg ctcggtgaca tagattctcg gctcgataat gcgtgctttt
     2521 gcaccagcga gagccacagc ctcgagcaac ctgaggatct catgctggta ataggcatag
     2581 ggaagcgagc ggtcgagtgc gatcgcatcc tttgtcttta agccaaccgt gaccctcgcc
     2641 ccaagccgcc gcacgaaagg gttggagtgt agtcccccgc cgtgcagctg gatcgcaagg
     2701 tcgaaccgct cttcattcat gcgggcaaag aaccgttcaa gctcatcagc gttttcgacg
     2761 caatccaaag gttcacctaa cccccgtact cttgggatca caacgacgcg atcgactgga
     2821 ccgaggcgat ggcttagata ctccgcgtgc catggcttcc cgagcaaagt gatctccgcc
     2881 tcggggtgcg tctgcttcag agcctcgaga gcgggcaggg taaaaacgag gtctcccagc
     2941 aggttggccc ttagcacggc gatctttctg acctcgggaa taaccggata agagtctctg
     3001 aacatggctc agcgccgcga gcaccattcg gtcaggcgcc tgctaacatt gcgccccttc
     3061 caattcagag gctgccggat acagatcgag gaccttcggc gcgtcaactt cccgctcttt
     3121 caccgtggtt gtgagctcct gatgataagc cccggaaggg atgaggccgc agccgccata
     3181 gcgcgccatc accctgatct gcgccagcac ctcctcaccg caatgattta ccggaagcct
     3241 cttccagaag tgaaagccgc cgactgcgcg cagcttctca acatcgtaaa gtacgcagcc
     3301 acccacccag gcgatgcggt acaggcgctg gttttgcgcg gtaatcccca gccgctgttg
     3361 cacgtgataa agattggcgg cgttgtgcaa cctgtgccgc tgccacttct cggttgccgg
     3421 ccgcacttct tccggcgtga ccctcccttc ccataattcg atcgcctgct catgggggcg
     3481 cacgtcatcg ataaagctca gcccgatcac cgcgctgccg acgaacccgc agccctcatc
     3541 gcggatcgca cggtgaaggc gctcgacgag gtccacctcc acgatgacat catcatcaag
     3601 gtaaagcgcg taaggcgcac tcactctttc gagaaggaac tggcgctgct cagccatgcc
     3661 gcgtcgcggc aggtggcggt gaatttccat ctcgtggccg tgggcgcgga ggatcctccg
     3721 cgccgccttc acttcaccct tttccgtcgt gtcttcggtt tccgtctggt cggagatgac
     3781 cacccggaaa tcgcgaaacg tctgggagca aagcgcgatt agggtcgcgg cgagagcgg
//
LOCUS       DASQSL010000351         1608 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_28935, whole genome shotgun sequence.
ACCESSION   DASQSL010000351 DASQSL010000000
VERSION     DASQSL010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1608
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28935"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            141..1253
                     /locus_tag="VE844_03515"
     CDS             141..1253
                     /locus_tag="VE844_03515"
                     /inference="COORDINATES: protein motif:HMM:NF020897.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HZC00449.1"
                     /translation="MGLCAKSIVIFNSIREHGKQSVRRLAERTGLSKSSVHRHLQAIE
                     RRDRYPESSFWETEAGRTWLIRLVVATVFVFGLKRGVGAETLSEFFSHLHLEWHVGCS
                     PSALRRVMHTLERIILDTAAAWEKEGVVHGEIRPVIGAVDETFLQRMMLVFMELASGY
                     LLMEEVSVDRSYDTWYGLAKARLQTFGTEVLYLVSDRAKALVKLAHTGLSCLSIPDLF
                     HLSYDLAKGYALAIFGRLRQAHQALEQAKQRLEALQACPPDSEQAPQAQAAVEACEAS
                     VKHWQGVRSAWRQHLSNLSRIMHPWRLVDSTRQTSQEVERQLHAELQHSKRCLRRTGC
                     RSKRAPWTRSASSLPASRPWSIFGGRPCGRTWRKWP"
     gene            1223..>1608
                     /locus_tag="VE844_03520"
     CDS             1223..>1608
                     /locus_tag="VE844_03520"
                     /inference="COORDINATES: protein motif:HMM:NF040081.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6399 domain-containing protein"
                     /protein_id="HZC00450.1"
                     /translation="MRQDLAQMAMTPRWTQWVEALLLPLMYWQEQLSHTRCPAQKAQI
                     AQALQAVQEAFEQHPCTGQLTPEVLAGWTSWAAEHARAFQRASSAVEGRNGYLSQMQH
                     NHRGLPTRRYQVWTVLHNFDCRAADGT"
BASE COUNT          319 a          462 c          500 g          327 t
ORIGIN      
        1 gggcgtgttg acgtagaacg atccatcttt gcgaaagtgg ggcatccacc taagccggga
       61 cactttgtcg tcgatcgcgt actctaagga actgatttca tccacgattt cagtcaccct
      121 tcagagcacg gaccgacacc atgggattgt gcgccaagag cattgttatt ttcaactcga
      181 ttcgtgaaca cggcaagcag agcgtccggc gtcttgcgga gcgaaccggg ctttccaaaa
      241 gcagcgtgca tcgtcatctc caggcgattg agcgccgaga ccgctaccca gagtcatcgt
      301 tttgggaaac ggaggcaggc cgtacctggc tcatccgcct ggtcgtggcc accgtgtttg
      361 tgtttggtct taaacgcggc gtgggagctg aaacgctcag cgagtttttc agtcaccttc
      421 acctggagtg gcatgtgggg tgttccccca gcgccctgcg gcgcgtcatg cacaccctgg
      481 agcggatcat tttggacacc gccgcggcgt gggagaagga aggcgttgtc catggcgaga
      541 tacgaccggt catcggggcc gtggatgaga cctttttgca gcgcatgatg ctggtattca
      601 tggagcttgc cagtggctat ttgttgatgg aagaggtgag cgtggaccgc agctatgaca
      661 cctggtacgg cttggccaag gcgcggctcc agacgtttgg caccgaggtg ttgtacctgg
      721 tgagtgaccg ggccaaggca ttggtcaaac tcgcccacac aggtctgagc tgcctgagca
      781 tcccggattt gtttcacctg agctatgacc tggccaaggg gtatgcactg gccatctttg
      841 gtcgtctgcg gcaagcccac caggctcttg agcaagccaa gcagcgcctc gaggccttgc
      901 aggcctgccc acccgacagt gagcaggctc cgcaggcaca ggccgccgta gaggcgtgtg
      961 aggcctcggt gaaacactgg cagggtgttc gcagcgcctg gcggcagcat ctttccaatc
     1021 tatcgcggat catgcatccc tggcggcttg tggactcgac ccgccagacc tcacaggagg
     1081 tggaacgcca gttgcacgcc gagctccagc actcgaaacg ttgcttgaga cgaacgggtt
     1141 gccggtccaa aagggcacct tggacaaggt ctgcaagcag cttgccggcg tctcggccct
     1201 ggtcgatttt tggtggcaga ccgtgcggca ggacttggcg caaatggcca tgactccgag
     1261 gtggacacag tgggttgagg cactgttgct gccgctgatg tattggcaag agcaactctc
     1321 acacacgcgc tgtccagctc aaaaagccca aatcgcacaa gctctccagg cggttcaaga
     1381 ggcctttgag cagcaccctt gcaccggaca actgacaccc gaggtgctgg caggctggac
     1441 atcgtgggcc gctgagcatg ccagggcctt ccagcgagcc tcctcggcgg ttgaaggtcg
     1501 aaacggctat ctgtcccaga tgcagcacaa ccatcgcggc ctgccgacgc gtcgctacca
     1561 ggtatggacg gtattgcaca actttgattg tcgcgccgca gatgggac
//
LOCUS       DASQSL010000352         1280 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_97955, whole genome shotgun sequence.
ACCESSION   DASQSL010000352 DASQSL010000000
VERSION     DASQSL010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1280
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97955"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1280)
                     /locus_tag="VE844_03525"
     CDS             complement(<1..>1280)
                     /locus_tag="VE844_03525"
                     /inference="COORDINATES: protein motif:HMM:NF017076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE2 domain-containing protein"
                     /protein_id="HZC00451.1"
                     /translation="LFRHTIRVDPIPSLKQAAEIGVATLQIDPDGVVRRVKLSSPDLL
                     SFPVQIVRRYMTHRTREQGGVPIPSWKRWTGREVLINYLGPSRTIKTVSYYQALDYEH
                     MLPPGVFAGKIVLVGQSLNTVSEPEHMSPDTFLTPFSLVAERLSSGVEIQATIVANLL
                     QGDFIVECGATERTAVLLLIALIGSLMLLKFKPVNGLIATVVVASLVWLIAYRLFSKT
                     GMWLPVFPATMELGLVYAGHLVAWSRAAERERRQALEEMNRSLEQKVAKRTEEISAAH
                     QELTERHQQLEKAYQELARAEEQLIQSEKMASLGLLVAGVAHELNNPISFVHGNLEFI
                     EEYVGRLTGIIEAYGVLDRSAGGARRRGDEQSKAARLDNTLERLRELISSCKQGTERV
                     KKIVMDLRTFSRTDDIGLVQADLHQGIDSTLNLL"
BASE COUNT          286 a          379 c          339 g          276 t
ORIGIN      
        1 tccaggagat tcaaggtcga gtcgatcccc tgatgaagat cggcctgaac cagaccgatg
       61 tcgtctgttc gagagaaggt gcgcagatcc atgacgatct tcttgacccg ttccgtgccc
      121 tgcttacaac tgctaatgag ctctctcaac ctctccaggg tattatcgag tcgggccgct
      181 ttgctctgct catccccacg tcgacgagcc cctccagccg atctatcgag gactccatag
      241 gcttcgatga tcccggtgag gcgcccgacg tattcctcaa tgaactcgag attaccatga
      301 acgaagctga tcgggttatt gagctcatga gccacaccgg ccacaagcag ccccaaagag
      361 gccatctttt ccgactggat gagctgctcc tcggctctcg ccagttcctg ataggccttc
      421 tcaagttgct gatgccgctc ggtgagctcc tgatgggcag cagagatctc ctccgtccgc
      481 ttcgccactt tttgctccaa actccggttc atctcttcca gggcttgccg gcgctcgcgc
      541 tcggcggcac ggctccaagc tacaaggtgg cccgcataga ccaaaccgag ttccattgta
      601 gccggaaaaa caggcaacca catccctgtc tttgaaaaca gcctataggc gatgagccat
      661 actagactgg ccactactac ggtggctatc aatccattga cgggcttgaa tttgagcagc
      721 atgaggctgc caattagggc tatcaacagc aagacagctg tgcgctccgt tgccccacac
      781 tcgacgataa aatctccctg cagcagatta gcgacgatgg tagcctggat ctcgaccccc
      841 gagctcagcc tctcggccac caaagaaaac ggggtaagaa acgtgtcagg agacatgtgc
      901 tctggttcag agaccgtatt gagcgattgg ccgaccaata cgatcttgcc agcaaagaca
      961 ccgggtggca gcatgtgctc ataatcgagc gcctgatagt aggagaccgt tttgatcgtc
     1021 ctcgatggac ccagataatt aatcaggacc tccctcccag tccatcgttt ccagcttggg
     1081 atgggtacgc ctccctgctc tctagttcga tgagtcatat agcgtcggac gatctgcacc
     1141 gggaaggaaa gcaggtccgg ggaggaaagc ttgactcgcc tgacaacccc atcggggtcg
     1201 atctgcaggg tcgccacgcc tatctcagcg gcttgcttga gggaggggat gggatcgacc
     1261 cgaatcgtgt ggcgaaagag
//
LOCUS       DASQSL010000353         1240 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_140009, whole genome shotgun sequence.
ACCESSION   DASQSL010000353 DASQSL010000000
VERSION     DASQSL010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1240
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140009"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1014)
                     /locus_tag="VE844_03530"
     CDS             complement(<1..1014)
                     /locus_tag="VE844_03530"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HZC00452.1"
                     /translation="MQSDIDMRYVFGDYLLDTQRYELSYRNQPIKLRPKVFYVLSYLI
                     AHRDRVVSKDELLDQVWPNQFIGDGSLNACLMAVRKAVGDNGQAQRCIQTLHGRGYRF
                     IANVQEIIEEEPQEALGTLSTDTETIPPETPQAEPNHQTAPDIDPPPAVMSTPTAERR
                     QLTVMCCDLVDGTSLAEQLDPEVYRQVVRAYHQICAQVIERFDGYMSQYLGAGLMVYF
                     GYPLAHEDAPQRAVRAGLGILTACQRYNTQLEPDTGVQLVARVGIHTGLVVVGDSGDG
                     APQAHLALGHTPNIAARIQDLAAPHTVVVSASTYRLIRAHFRCEPLGVQRLRGVTQSL
                     MLHR"
BASE COUNT          266 a          361 c          364 g          249 t
ORIGIN      
        1 gcggtgcagc atgagggact gggttacccc acgcaggcgc tgtacgccca ggggttcgca
       61 gcggaagtgc gcccggatca gtcggtaggt cgaagcactc acgaccacgg tatgcggcgc
      121 tgccaggtct tggatacggg cggcaatatt cggggtgtgt cccaaggcga gatgcgcctg
      181 cggtgccccg tcgccactgt cgcccacgac caccaggccc gtatggatgc ccacgcgggc
      241 cacgagctgg acacccgtgt ccggctccaa ctgggtatta taacgctggc acgccgtcag
      301 aataccgagc cctgcgcgca ccgcccgctg tggcgcatcc tcatgcgcca gcggatagcc
      361 aaagtagacc atcagaccag cgcccagata ttgcgacata tacccgtcaa agcgctcgat
      421 gacctgcgca cagatctggt gatacgcccg cacaacctgg cggtacactt ccgggtcgag
      481 ctgctcggcc aggcttgtgc cgtcgacgag atcacaacac atgaccgtga gttgacggcg
      541 ctcggccgtg ggggtcgaca tcacggctgg cggcggatcg atgtccggcg cggtttgatg
      601 attgggttcg gcctgcggtg tttccggagg aatcgtctcc gtatcggtcg acagcgtccc
      661 caaggcctct tgtggctctt cctctatgat ctcctgcaca ttggcgataa agcgataacc
      721 gcggccatgc agcgtttgga tacaacgttg tgcttgtccg ttgtcgccca cggccttgcg
      781 caccgccatc aggcaggcgt tcaagctccc gtcgccaata aattgattgg gccacacctg
      841 gtcgagcaat tcgtctttcg acacgacgcg atcccgatgc gcgatgaggt agctcaggac
      901 gtaaaacacc ttgggccgga gcttgatcgg ctggttgcgg tacgagagtt cgtagcgctg
      961 agtatcgagc aggtaatcgc caaaaacgta acgcatgtct atgtccgact gcatgtgtac
     1021 atccatgtcg tggccaccaa aatcggtcct ccatcatagc atgaaaagac tacaaaaaga
     1081 ctacaaaaat gctaggaaac tgtcatgtcg tctggctgct gcgggcctat agttatgatt
     1141 gagtttaata gaattcaacc atctagctgg tctccagagc catcgatcag gaaggaaatc
     1201 aagcgatgaa gatgatcagg caattcagga ccttggaccg
//
LOCUS       DASQSL010000354         1098 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_57673, whole genome shotgun sequence.
ACCESSION   DASQSL010000354 DASQSL010000000
VERSION     DASQSL010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57673"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..244
                     /locus_tag="VE844_03535"
     CDS             <1..244
                     /locus_tag="VE844_03535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00453.1"
                     /translation="LWAAMLNDMGNARWAIGIRTKGTDIHQHLAAAVKFLRAALEVYT
                     REHFPPQWEKTQRNLTLALEALDGAQAKLPPRGQRP"
     gene            complement(600..779)
                     /locus_tag="VE844_03540"
     CDS             complement(600..779)
                     /locus_tag="VE844_03540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00454.1"
                     /translation="MIYHVQFTPQALEDLSRLDAAIARRIAEKIQWLAEHFDQIQPET
                     LTGPFASLFKLRVGD"
     gene            complement(776..976)
                     /locus_tag="VE844_03545"
     CDS             complement(776..976)
                     /locus_tag="VE844_03545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00455.1"
                     /translation="MKVADLTVDELQALIRKVVHEELQDIIADPDKGLELTGEIQARL
                     QSSLGSSDRIPFEEVKSRLNLA"
BASE COUNT          252 a          277 c          321 g          248 t
ORIGIN      
        1 gctctgggcg gcgatgctca atgacatggg aaacgctcgg tgggccatcg gtatccgtac
       61 caagggaacg gatatccatc agcacctggc cgcggccgtc aagtttctcc gggcggccct
      121 ggaggtgtac acccgagagc atttcccacc ccagtgggag aagacacaga gaaatctcac
      181 gcttgctttg gaagccctgg atggtgcgca agcaaagctg ccccctcgcg gacagagacc
      241 ctagacctcc gtgccgccta tacggctatc ttgtctcaat acaccaaagc acagagtgaa
      301 agcccgcgta ggttggggtg aggcacgaac cccaacatgt tgcggcggtg gggtttacgt
      361 tggggttcct tcatcacccc acctacgatt ggatggtgga atgaatgcgg tatcggcggg
      421 ccgatgtgac aggtgggact tatttcttca ccgtcaatct ggccgaacgg aagtgaatga
      481 agattgaatt aggtgcgcga tgcgcacgct cggaatcagg acttataaac tttgctgcga
      541 tggtcaataa catgaatcgt tatggtgtgt tgaaccggat cagatgtgta gagcacgcgt
      601 cagtcaccaa cgcggagctt gaacaggctc gcgaaggggc ctgtcagcgt ctccggttgg
      661 atttgatcga aatgctcggc gagccattgg atcttttcgg ctatgcgtct ggcgattgcg
      721 gcatcaaggc gggaaagatc ctcaagcgct tgaggggtaa attggacgtg atagatcaag
      781 cgagattcag cctgcttttc acttcctcga acggaatccg gtcggaggag cccagggacg
      841 attggagccg tgcttggatc tcgccagtca gctccagccc cttatcagga tcagcgatga
      901 tatcctgtaa ctcttcatgc acgacttttc tgatcagtgc ttgtaattca tcaaccgtga
      961 gatcggcgac tttcatgctg ttacctcttt atgtacggaa caggtcggga atgccctctt
     1021 attataccgg agggtgtcgg atcaaagaag agaagaaagc acaaacgggg tctggcccca
     1081 tatctgccat tgaggact
//
LOCUS       DASQSL010000355         1006 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_140020, whole genome shotgun sequence.
ACCESSION   DASQSL010000355 DASQSL010000000
VERSION     DASQSL010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140020"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(176..610)
                     /locus_tag="VE844_03550"
     CDS             complement(176..610)
                     /locus_tag="VE844_03550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015304483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HZC00456.1"
                     /translation="MSTEENKALSRQVRETMDAGELAAFDEYVAPDAVFHIAGNPAPL
                     GREEMRGLLEVFYSAFPDLQHTFEDQIAEGDKVVTRITFRGTHRGEFQGIPPTGNEVA
                     FPALDIDRFEDGKIVEHWANLDNLGLMQQLGVIPPPEQSEEA"
BASE COUNT          198 a          299 c          289 g          220 t
ORIGIN      
        1 gtctgcacag gctttgcaca aaaagtcggg gctaaacgcc agggatggca gttcgactct
       61 gaacgaacca ctaccccttg tggtcgctcg tgattcttgt gcaaggccgt ctgcacaaaa
      121 agtgggcgat ctgcaccaaa agtccccgta gccctcggtc ggttttaggt ggggcttaag
      181 cttcctcgga ctgttccggc gggggaatga cgcccagctg ctgcatcaag cctagattgt
      241 cgaggttggc ccagtgctcc acgattttgc cgtcctcaaa gcggtcgata tcgagcgctg
      301 ggaacgcaac ctcgttgccg gttgggggga ttccttgaaa ctcgcctcga tgagtgcctc
      361 gaaacgttat gcgggtcacg accttgtctc cttcggcgat ctgatcttcg aaggtgtgct
      421 gtaggtcagg gaaggctgag tagaacactt ccagcagtcc cctcatctct tcgcggccca
      481 gcggcgcggg attaccggcg atgtgaaaga cggcgtcggg ggcaacgtac tcatcgaagg
      541 ctgccaactc tccggcgtcc atcgtctcgc ggacctggcg gctaagagcc ttgttctctt
      601 cggtggacat agagcgtact tcctttcccc cgctttccct agcgggctag tcctttccca
      661 caccgccatg atgtcaccgc ccaaagcccg gcgcatcccc gacgggatcg ttgttgcgga
      721 cggctagtcg ggcgcgggta tcctgatggc gggttgggaa cctagccgac tttttgtgca
      781 gaaatccgag ttgcacaaaa agtcccccga aaacagcact ttatgtgcaa ggccgagtga
      841 ggcgcgattt ttggtgcaag gccctgtagc cgaagcctcc caactacttg ccttattcac
      901 ccaagtgcgg ggaagaggaa ttctcggaag tccatatcca gaaacctgca tagccccggt
      961 cctaacgagc catgatcgcc ctgctagacc ccccgcagtt ggaccg
//
LOCUS       DASQSL010000356         3065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_166231, whole genome shotgun sequence.
ACCESSION   DASQSL010000356 DASQSL010000000
VERSION     DASQSL010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3065
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166231"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(164..514)
                     /locus_tag="VE844_03555"
     CDS             complement(164..514)
                     /locus_tag="VE844_03555"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HZC00457.1"
                     /translation="MVFLAVVFGCVQEDVEKTAMKETGGNPKRGKVTIRLYGCGACHT
                     IPGVPGANGRVGPPLNRVARRAYLGGVLPNTPTTMSRWIQNPQEVDPRTAMPAMGVTE
                     RDVHDIVAYLYTLE"
     gene            complement(645..2441)
                     /locus_tag="VE844_03560"
     CDS             complement(645..2441)
                     /locus_tag="VE844_03560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015244328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HZC00458.1"
                     /translation="MPSRIEDYALIGDCETAALVARDGSIDWLCFPRFDSGACFAALL
                     GTPEHGRWLLAPVGNIRNIRRRYREGTLILETEYETDDGVVTLIDWMPPRTAVPDVMR
                     IVAGKRGQVPMRMELIIRFDYGSVVPWVRHMERGIRATAGPDTVYCRTDVELRGENLH
                     TVADFTVSAGQRIPFELSWCATYQHQPVPEGKDVAQNLKETEEWWRDWSDRCTYQGEW
                     RDAVLRSLIILKALTYAPTGGLVAAATTSLPEKLGGVRNWDYRYCWLRDATFTLYALM
                     AGGYTQEACAWREWLINAVAGKPSELQIMYGLAGERRLTELTLDWLPGYEGASPVRIG
                     NAACGQHQLDVYGEVMDTLYLARRAGLEPSENAWRVQRAMMRFLETNWDKPDEGIWEV
                     RGPRRHFTHSKVMAWVALDRAIKTVENLGLEGPVEDWLGLRQHIHDQICNEGFDAELN
                     SFVQYYGSKEVDASLLMLPLVGFLPATDPRMLGTVEAIQQRLMRDGFVDRYSTLSEVD
                     GLPSGEGAFLLCTFWLADNLALQGRYAEAREIFERLLDLRNDVGLLSEEYDPQTRRLV
                     GNFPQAFSHVGLINTACNLTTVRGPAEDRQKQ"
     gene            complement(2411..2743)
                     /locus_tag="VE844_03565"
                     /pseudo
     CDS             complement(2411..2743)
                     /locus_tag="VE844_03565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019873452.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="theronine dehydrogenase"
     gene            complement(2807..>3065)
                     /locus_tag="VE844_03570"
     CDS             complement(2807..>3065)
                     /locus_tag="VE844_03570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010321511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1732 domain-containing protein"
                     /protein_id="HZC00459.1"
                     /translation="QEMLLLAQKLDVAEELERLETHLAELRRILAQKGPIGRRLDFLI
                     QEMNREANTVASKSIHVETTRASVELKVLIEQMREQAQNIE"
BASE COUNT          637 a          936 c          829 g          663 t
ORIGIN      
        1 gtggctgtca tttcaggctc tccagataag ccgcgagggc tcgcaactcc tcaccgcgat
       61 ctattgtgcg tccggtcccc gcgggtcaag gaccgattgg ataccgtcgc acgcggggag
      121 tggcaggaga gcgagcagcg ctagtgatcg agcgctgggt tgtttactcc aaggtataaa
      181 gataggccac gatatcatgg acatcgcgct ccgtcacccc catagccggc atggccgttc
      241 tcggatctac ttcttgcggg ttttgaatcc atcgactcat agtggtaggc gtgtttggta
      301 gcacgcctcc tagataggca cgcctggcta ctctattgag cggcggacct accctgccgt
      361 tagcacctgg cacgccgggg atcgtatggc acgctccgca accatataga cgaatagtca
      421 ccttccctcg cttagggtta ccccctgttt ccttcatcgc tgttttttcc acatcttctt
      481 gaacgcaacc gaagaccaca gcaaggaaga ccataagtac accgatcagt ctgactggcc
      541 tcacttgagc cttgcgatga actctgcccc cttggacgaa ggcagtaagc aatcggtgcg
      601 agtttcatac ccacggctgg gctcccctgt tgtagcggaa gttgtcactg cttttgccga
      661 tcttcggccg gaccccttac tgtcgtcagg ttgcaggccg tgttgatcag ccccacgtgg
      721 gaaaatgcct gcggaaagtt ccccacgagc cgccgcgttt gcggatcgta ctcttcggag
      781 agcaagccga catcgttgcg caaatccagc aggcgctcaa agatctcacg agcctccgca
      841 tagcgtcctt gcagggcgag gttatcggcg agccaaaaag tgcatagcaa gaacgcacct
      901 tcgccggacg gtagtccatc cacttccgac aaagtggagt agcgatccac aaaaccatcc
      961 cgcatcaagc gttgctggat ggcttccacg gtgcccagca tcctcggatc ggtagccggc
     1021 agaaaaccca ccagtggaag catcagaagg ctcgcatcga cttctttcga gccatagtac
     1081 tgcacgaaag agttgagctc ggcatcgaag ccttcgttac aaatctgatc gtggatgtgc
     1141 tgacgtaagc cgagccagtc ttcgacagga ccttcgagtc ctagattttc taccgtcttg
     1201 atggcgcgat ccagcgcgac ccaggccatc accttggaat gggtaaagtg ccgtctcggt
     1261 ccccggacct cccagatgcc ttcgtcgggt ttgtcccaat tcgtctccaa gaatcgcatc
     1321 atcgcccgct gtacgcgcca agcattttca ctcggctcaa gcccggcacg gcgcgcgaga
     1381 taaagcgtat ccatgacctc cccatagaca tccaattgat gctggccgca ggccgcattg
     1441 ccgatgcgca ccggtgatgc gccctcatag ccaggtagcc aatccagtgt gagctcggtc
     1501 aagcgtcgct ctccggccag cccgtacatg atctgaagct ccgacggctt gccggcaacg
     1561 gcgttgatca accactcacg ccaggcgcag gcttcctgcg tgtaaccacc agccatgagg
     1621 gcgtagaggg taaaagtagc atcccgcagc cagcaatatc tgtaatccca gtttcgcacg
     1681 ccgcccaact tttccgggag cgaggtggtc gcagcagcca ctaatcctcc ggtcggtgca
     1741 taagtgaggg ccttgaggat gatcaaagag cgcaggacgg catcgcgcca ttcgccttga
     1801 tatgtgcacc gatctgacca atctcgccac cattcttcgg tttccttgag gttttgcgca
     1861 acgtcttttc cttctggcac gggctgatgc tgataggtcg cacaccagct caactcgaac
     1921 ggaatacgct gccccgcgga tacggtaaag tcggccacgg tatgcaggtt ttctccgcgc
     1981 agctcgacat cggtacggca atatacggtg tccggcccag ccgtggcgcg tattcctcgt
     2041 tccatatggc gtacccatgg gacgaccgac ccatagtcga agcggatgat cagctccatc
     2101 cgcatgggta cctgtccgcg tttccccgcc acgatacgca tgacgtccgg caccgcagtg
     2161 cgtggcggca tccaatcgat cagagtcacg acgccgtcgt cggtctcata ttcagtctcg
     2221 aggatgagtg tgccttcccg atagcgccgc cgaatattgc gaatgtttcc cacgggtgcg
     2281 agcagccaac gcccatgttc cggagtgcct agcagagcgg caaagcaggc tcctgagtcg
     2341 aagcgcggaa aacacagcca gtcaatcgac ccatcccgag cgacaagcgc cgcggtctcg
     2401 cagtctccga tcagcgcata atcctcgatg cgcgagggca tagtggctcc ctttcacaaa
     2461 gtgagagatc gatgaacgcc ttcacgtccc tgggctgagg ggtcagcgct tcctcccatc
     2521 gcgctaaggg cacgcgccga gttattagcc gctctagcca atcgagatcg gcacgggcca
     2581 atgcatcggc agcgactcta taatgtcggc gattggcgtt cactgaaccg aataccacgt
     2641 cattttctag caccatgctg cgattgagcg cggcaagatc cgcctctagc aagcgttctc
     2701 aggatgacag gcccgtgaga cacacgatac cccccggccc tgtacagtgc atggcgcatt
     2761 agcggctttc gtggattttt gggatgttgt gaaatgtact gaaacgctac tctatgtttt
     2821 gagcctgttc acgcatctgt tcgataagca ccttgagttc caccgaggct cgcgtcgtct
     2881 cgacatggat ggatttagag gccaccgtgt tggcttcccg attcatctct tggatcagga
     2941 aatcgaggcg ccggccgatc ggcccctttt gggccagtat ccgtcttagt tccgcaagat
     3001 gggtctctaa gcgttccaac tcttcggcga catcgagctt ctgggcaagc aatagcattt
     3061 cctgt
//
LOCUS       DASQSL010000357         1035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_17060, whole genome shotgun sequence.
ACCESSION   DASQSL010000357 DASQSL010000000
VERSION     DASQSL010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17060"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..222
                     /locus_tag="VE844_03575"
     CDS             <1..222
                     /locus_tag="VE844_03575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00460.1"
                     /translation="TIAVGGLAWWCGVALIVWGWALVFLLLLPMMGVLAPPFPVSWGG
                     VLAGVSWLVVGFGVFRAARGQTEQPQRER"
     gene            405..662
                     /locus_tag="VE844_03580"
     CDS             405..662
                     /locus_tag="VE844_03580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012842642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HZC00461.1"
                     /translation="MGIISWIVVGLIAGALAKLVLPGDDPGGIIVTAIIGMVGAVVGG
                     FVFGIFGGTGATGFNVWSIVVATVGAIVLLLIYRLIAETLS"
     gene            complement(848..>1035)
                     /locus_tag="VE844_03585"
     CDS             complement(848..>1035)
                     /locus_tag="VE844_03585"
                     /inference="COORDINATES: protein motif:HMM:NF017353.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HZC00462.1"
                     /translation="GSSGKDDKDNKDKGAMDRAKGRMKEAGGALTGEKGKKREGRSDQ
                     RKGRAKQKKGDLKDLLS"
BASE COUNT          187 a          285 c          306 g          257 t
ORIGIN      
        1 accatagctg tggggggatt ggcctggtgg tgcggagtag cactcatagt ctggggatgg
       61 gcattggtat tcttgctgtt gctacccatg atgggcgtct tggcaccccc atttccggta
      121 tcttggggag gggtattggc aggggtaagt tggctcgtgg tgggctttgg tgtgttccga
      181 gcggcgagag gacagaccga gcagcctcaa agagagcgct aaggcgacga acttcttaga
      241 actccgtcaa cgcgaagtag ttcgcacaat ctatcttcta ggtattccga tgaataaggg
      301 ctagcgactg gctcacctag gcacgtaagc ggctcaggta tatgatgatg gagtctactc
      361 cccactaggg gcagcccttc agagaggagc gctaaggaga acatatgggc atcataagct
      421 ggatcgtggt cgggttaatc gccggtgcgc tggccaagct ggtgctgccc ggagatgacc
      481 ccggcggcat tatcgtgact gccataattg ggatggtggg cgctgttgtg ggaggctttg
      541 tgttcgggat ctttggcggc acgggagcta cgggattcaa tgtgtggtct atcgtggtgg
      601 ctacggtggg agcgatcgta ctgctgctca tctaccgcct gatcgctgag acacttagct
      661 aatgtactca cctctctccg cgcaaggcag cagaagccac acacattagg atatcggctg
      721 cccaacttcg cgaaacccct cctgccgact tcgcacaatt caccttccac gcactcgggt
      781 aaataaggac ataagaaaag gggccgaggc tcttaggcgc cccgaccctt tcgcagatgc
      841 tcctcgttta cgagagtaga tccttgaggt cgcccttctt ctgcttggcc cttcccttcc
      901 tctgatccga gcgaccttcc ctctttttgc ccttctcgcc cgttagggca ccgccggctt
      961 ctttcatccg gcccttggcc cggtccatcg cccccttgtc tttgttgtct ttgtcgtcct
     1021 tgccgctgct gccgc
//
LOCUS       DASQSL010000358         5397 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_153927, whole genome shotgun sequence.
ACCESSION   DASQSL010000358 DASQSL010000000
VERSION     DASQSL010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 5397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5397
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153927"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..380
                     /locus_tag="VE844_03590"
     CDS             <1..380
                     /locus_tag="VE844_03590"
                     /inference="COORDINATES: protein motif:HMM:NF024952.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="2'-5' RNA ligase family protein"
                     /protein_id="HZC00463.1"
                     /translation="SVDASARIYAEAVADNLRAVSAELRLDQLGYWPGPRVLWLGAST
                     VPPALRRLQILLQQGIARTGMELDDRPFKPHMTLMRKVSPAPQLPTLEPIDWQIEQFA
                     LVESVTRSAGAVYRVLRLWELGG"
     gene            404..2617
                     /gene="rlmKL"
                     /locus_tag="VE844_03595"
     CDS             404..2617
                     /gene="rlmKL"
                     /locus_tag="VE844_03595"
                     /EC_number="2.1.1.173"
                     /EC_number="2.1.1.264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007039620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008990 - rRNA
                     (guanine-N2-)-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 23S rRNA
                     (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA
                     (guanine(2445)-N(2))-methyltransferase RlmL"
                     /protein_id="HZC00464.1"
                     /translation="MELLHFFATAPKGLEALLAQELIDFGAKAVKPKRAGVAFEGPLA
                     LGYRACLGSRVASRILLNLTAFKASSPEELYAGVRSLRWDEHLAPTSSFAVDFNAARS
                     AITHTHFGALKVKDAIVDQFRETHGQRPSVALTRPDVRINVHLEQNDAYLGLDLSGDS
                     LHRRAYREETVAAPLKENLAAALLLYTGWPALAASGAPLLDPLCGSGTLCIEAAFIAG
                     DIAPGLLRPYYGFMGWRGHDPKCWSELLDEAAARKQAGCTRMPKIAGYDADRNAVRIA
                     LGNIERAGLRGLVHAERREFQTARPLGQRAGLIITNPPYGERLDQDKGLPRLYADLGD
                     TLTHHFAGWRAAVFTGNPELSHRLRLSPEQTYTLYNGTLKCKLLIVELPRPSPEPAQQ
                     KSIGRMPIQRSASPTPPAKAVPSGAGTHVEMFANRLHKNLKRLGRWAERQGIDCYRLY
                     DRDLPEYALAIDLYQGERDWVHVQEYEAPATVDSTHAEARLQAALGVIPQLLEIPAEQ
                     MFLKLRRRQRGTAQYQNLGRAGEFYPIGEGGCRFLVNFTDYLDTGLFLDHRLIRAIIQ
                     ALAPDRRFLNLFGYTGTATVYAALGGAKDTTTVDLSTTYLDWTRRNLTLNGIDGDPHR
                     LVQADCLEWLSQVVASKPRPAYGLILLDPPTFSNSKRMRQTLDIQRDHVDLIVKTAKL
                     LEPRGVLIFSTNRQRFRLEADALRSLKAEDITAATIPLDFSRHPGIHQCWRITRE"
     gene            2628..3365
                     /locus_tag="VE844_03600"
     CDS             2628..3365
                     /locus_tag="VE844_03600"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017917391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HZC00465.1"
                     /translation="MPVLFISDLHLSHERPEKLALFFELLRGPARRAQALYILGDLVE
                     VWIGDDDTTPPHPEILAALADFSRTGRPLYVMHGNRDFLLGSRFEILTGAQLIADPSV
                     IDLYEVKTLLMHGDLLCTKDTAYQSFRRHVRAPDWQRRALALPLAERAALAGQLRADS
                     QSAMQQKAMAIMDVDPEAVEQTMIAHGVAQLIHGHTHRPAIHRFTLNGQAARRIVLGD
                     WYGAGEIVFYDEQGPNLIDVETCLARF"
     gene            complement(3373..3921)
                     /gene="ampD"
                     /locus_tag="VE844_03605"
     CDS             complement(3373..3921)
                     /gene="ampD"
                     /locus_tag="VE844_03605"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013033623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HZC00466.1"
                     /translation="MHLDAINGWLTGVRRLPSPNCDDRPAGTDIELLVIHGISLPPGQ
                     YGGGYIDRLFTNTLDPEVHPYFRAIGGLKVSAHVVIDRAGDLTQYVPFHRRAWHAGNS
                     HFEGRSACNDFSIGIELEGCDDEPYQAVQYRVLADLATLLMRVWPAIQGDRIVGHAEI
                     APGRKTDPGPAFDWGYFRSLLR"
     gene            3977..4849
                     /gene="nadC"
                     /locus_tag="VE844_03610"
     CDS             3977..4849
                     /gene="nadC"
                     /locus_tag="VE844_03610"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013333330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0019363 - pyridine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HZC00467.1"
                     /translation="MLAREPRVPLPETIDQDARRALAEDLGNGDLTAALIPQDSRIQA
                     QVITREPAILCGILWFNSIFRQLDERIAIAWQAADGDAIAPNQALCHLEGPSRALLSG
                     ERTALNFLQILSGTATLTRGYADALHGTSTRLLDTRKTIPGLRAAQKYAVRCGGGYNH
                     RLGLFDGLLIKENHIMAAGSIESAVKRAKALYPDRSVEVEVEDRDQLVQAIEAGAQIV
                     LLDNFTLEHLRESVTLNQGRVLLEASGGGFDRATLGEVAKTGVDYVSVGALTKHVRAI
                     DLSMRFLNNQETFL"
     gene            4846..5346
                     /locus_tag="VE844_03615"
     CDS             4846..5346
                     /locus_tag="VE844_03615"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin family protein"
                     /protein_id="HZC00468.1"
                     /translation="MRTIIHAVFAMTVLSLSIALGAAEKHPHATRNEHGHASKHANFG
                     RPGKADQVQRTIEVKALDTMRYDPQTFTVKAGETIRFVVTNVGRLKHEFIIGDPAEQR
                     AHAEMMRKMPGMEHEDPNALNLEPGETKTLIWQFGQAGVVEVACHVPGHYEAGMVAQV
                     KVGELK"
BASE COUNT         1142 a         1594 c         1563 g         1098 t
ORIGIN      
        1 gcagtgtcga tgcgtccgcc cggatctatg ccgaggcagt ggccgacaat ttgagggcgg
       61 tctccgctga attgcgcctg gaccaactgg gctattggcc gggacctcgg gtgctgtggc
      121 ttggagcctc aacggtccca ccggcgctca ggcgattgca gatcctgctt cagcaaggca
      181 tcgcgcgcac cggtatggag ctcgatgatc gcccttttaa gccccatatg accttgatgc
      241 gcaaggtatc gcctgcgccc cagctgccca ccctcgaacc tatcgattgg cagatcgagc
      301 agtttgcgtt agtcgaatcg gtaacccgct cggcgggggc ggtctaccgg gtgcttaggc
      361 tctgggagct tggcggatga gatagtcagc aaagacattg atcttggaac tacttcactt
      421 tttcgccacc gcccccaaag gtctagaagc cttgctggct caagaattga tcgatttcgg
      481 ggccaaagct gtcaagccaa aacgcgctgg ggttgccttc gaggggccgt tagcgctcgg
      541 ttaccgcgcg tgtctggggt cgcgtgtggc aagccgtatc ctactcaatt taaccgcctt
      601 taaagcctcc tctcctgagg aattgtacgc cggagttcga tccctccgct gggatgagca
      661 cctggctccc acaagctcgt tcgctgtcga tttcaacgcc gcgcgatccg ctatcacgca
      721 tacgcacttt ggcgctctca aggtgaaaga cgcgattgtg gaccagtttc gggagactca
      781 cggccaacgc ccctcggtgg cgctgacacg ccccgatgtg cgtatcaatg tccatctgga
      841 gcaaaacgat gcctatcttg gccttgacct ctccggggac agcttacacc ggcgggctta
      901 ccgggaagag acggtagccg caccgcttaa agaaaacctc gctgccgcac tccttctcta
      961 tacaggctgg ccggcactgg ccgcctccgg tgcgcccttg ctggaccccc tatgcggttc
     1021 aggcacgctc tgcatcgaag cggcgtttat cgccggggat attgccccag ggcttttgcg
     1081 cccctattac ggttttatgg ggtggcgggg gcatgaccca aagtgctggt ccgagctgct
     1141 cgatgaggcc gcagcccgca agcaagcggg ctgtacacga atgccgaaga tcgccggtta
     1201 tgatgcggat cgaaacgccg tgcggatcgc actcggtaat atcgagcggg cgggactgcg
     1261 gggcctagtg catgccgaac ggcgagaatt ccagacggcg cggccgttag gacagcgcgc
     1321 agggcttatc atcaccaatc caccgtatgg cgaacgcctg gatcaggata agggcttacc
     1381 gaggctctat gcggatctcg gcgataccct cacgcatcat tttgccggct ggcgggcggc
     1441 ggtttttacc ggcaatcctg aactcagcca tcgcttgcgc ctctctccag agcaaaccta
     1501 taccctctat aacggcacgc tcaaatgtaa gcttttgatc gttgagcttc cccggccaag
     1561 tccagagcct gctcagcaga aatctatagg caggatgcct atacagcgat ccgcttcgcc
     1621 tactcccccg gcgaaggcgg tcccaagcgg ggccggcacc catgtagaga tgttcgccaa
     1681 ccgcttgcac aagaatctca agcggctcgg acgctgggca gaacgccagg gtatcgattg
     1741 ttaccgactc tatgatcggg atctcccaga atatgccctg gccatcgatc tttaccaagg
     1801 agaaagagac tgggtccatg tgcaagaata tgaggcgcct gctacggtgg actccactca
     1861 cgctgaggcg cgattgcaag cggcgcttgg cgtgatccct cagctgctcg agatcccggc
     1921 cgagcagatg tttctcaagc tgcgccgccg ccaaagaggc acggctcagt atcaaaacct
     1981 cggcagggcc ggtgagtttt atccgatcgg tgaaggcggc tgtagatttc tggtcaattt
     2041 caccgattat ctcgacaccg gcctgtttct cgatcaccgc ctgatccggg ccataatcca
     2101 agcattggcg ccagatcgga ggttcttgaa tctgttcggt tacaccggca ccgccaccgt
     2161 gtatgcggcg ttaggcggtg cgaaagacac cacgaccgtg gacctgtcga ccacctatct
     2221 cgattggacc cggcgtaatc tcaccttgaa cgggatcgac ggggacccgc atcgcttggt
     2281 tcaggccgat tgtctcgaat ggctgtccca agtggtcgcg agtaaacctc ggcccgcgta
     2341 tggacttatc ctgctggacc caccgacctt ttctaattcc aaacgcatgc gccaaacctt
     2401 ggacatccag cgtgaccacg tcgatctgat cgtgaagacg gcaaagctct tggagcccag
     2461 aggcgtcttg atcttttcca ccaaccgcca gcgcttcaga ttagaggcgg atgcgctccg
     2521 gagccttaag gcggaggata ttacggcagc gacgataccg ctcgatttct cgcgtcatcc
     2581 cgggatccat cagtgttggc ggataacgcg ggagtaaacg ctgggctatg cctgtcctgt
     2641 tcatctccga tctccatctg agccatgagc ggcctgagaa actcgcgctc ttcttcgagc
     2701 tgcttcgagg ccccgcccgt cgggcccaag ccctctatat cttaggcgat ctggttgagg
     2761 tatggatcgg tgacgacgac accaccccgc cccaccctga aatcctggcc gcgctcgcag
     2821 acttcagtcg aaccggcaga ccgctttatg tgatgcatgg caaccgcgat ttcctcctgg
     2881 gttcacggtt tgagatcctg acgggcgctc aattgatcgc cgatccttcg gtgatcgacc
     2941 tctatgaggt caagacgctg ttgatgcacg gcgatctcct ctgcaccaaa gataccgcgt
     3001 atcagagctt ccgccgccac gtccgggcgc ccgattggca acgaagagcg cttgccctgc
     3061 cactcgccga gcgggccgcc cttgccggcc aattgcgcgc cgatagccaa agcgcgatgc
     3121 aacaaaaggc gatggcgatc atggatgtgg atccagaagc ggtagaacaa accatgatag
     3181 cgcatggagt cgctcagctc atccatggtc atacccaccg cccggcgatc catagattta
     3241 ccctgaacgg ccaagcagcc cggcggatcg tgctcggcga ctggtatgga gcgggcgaga
     3301 tagtattcta tgatgagcag ggacctaacc taatcgatgt cgaaacctgc ttagcccgat
     3361 tttgacagag acttatctta gcagcgatcg aaaatagccc cagtcgaagg ccggccccgg
     3421 atcggtcttg cgccccgggg cgatctctgc atggccgacg atccgatcgc cttggatcgc
     3481 gggccatact ctcatcagga gcgtggccaa atccgccaaa acccgatact gcacggcttg
     3541 ataaggctca tcgtcacatc cttcgagttc gatgccgatg gaaaaatcat tgcaggcgga
     3601 tcggccttca aagtgcgaat tcccggcatg ccaagcgcgc cggtggaaag gcacatattg
     3661 ggtgagatcg cccgcccggt cgatcactac atgggccgat accttaaggc cgccgatcgc
     3721 tctaaaataa gggtggacct cgggatccaa ggtgttggtg aataatcgat cgatatagcc
     3781 gccgccgtac tgacccggag gcaagctgat cccatgaatg accaaaagct cgatgtctgt
     3841 accggcgggc cggtcatcac agttaggcga gggcagccgg cggacgccgg taagccaacc
     3901 gttgatagca tcgaggtgca tgatagcgtt atgatcagac agtgattaat ctaagactta
     3961 ttcgagatac ctcaatatgc tcgctcgaga accacgcgta cccctacccg aaactatcga
     4021 ccaggacgcc cgtcgcgcct tagccgagga ccttggcaac ggggatctga ccgcggcatt
     4081 gatcccccaa gacagccgta ttcaggccca ggtgatcacc cgcgagccgg cgatcctctg
     4141 cgggatcctg tggttcaaca gcatcttccg gcagctcgat gagcggattg cgatcgcatg
     4201 gcaggccgcc gatggcgatg cgatcgcccc caaccaggcg ctctgccacc tcgaaggccc
     4261 gagccgagcc ctgctcagcg gtgagcgcac cgccctcaat tttctgcaga tcttatcggg
     4321 taccgccacc ctcacccgcg ggtatgccga tgcattgcac ggcacctcta cccgactgct
     4381 cgatacccgc aaaactatcc ctgggctgcg ggcggcgcag aaatacgccg tgcgctgcgg
     4441 cggtggttat aatcatagac tcggattatt cgatggccta ttgatcaagg aaaaccatat
     4501 catggcggcg ggctcgattg aaagcgccgt caaaagagca aaggcgctct atccggatag
     4561 gtcggtcgag gtcgaggtcg aggatcggga tcaactcgtt caggcgattg aagcgggcgc
     4621 ccagattgtg ttgttggata acttcacgct cgagcaccta cgcgaatcgg tgacgctcaa
     4681 ccagggccgg gtgctgctcg aggcgtccgg ggggggattt gatcgggcca ccttgggtga
     4741 ggtagcaaag accggtgtgg attacgtttc ggtcggggcc ttgaccaagc atgtgagagc
     4801 gattgatctg tccatgcggt ttctgaacaa ccaggagaca ttcttatgag aacgattatc
     4861 catgcagtat ttgccatgac cgtgctcagt ttgtctatcg cgcttggggc cgctgagaag
     4921 cacccgcacg ccacacgtaa tgaacatggc catgcctcca agcacgctaa ctttggccgg
     4981 ccgggaaaag ccgatcaagt ccagcgtacc atcgaggtca aggccttgga taccatgcga
     5041 tatgatcccc agacgttcac tgtaaaggcc ggcgagacga tccgttttgt cgtaaccaac
     5101 gttggccggt taaaacatga attcatcatc ggcgatccgg ccgaacagcg ggcgcacgcg
     5161 gagatgatga gaaagatgcc gggtatggag cacgaagatc ccaatgcctt aaacctcgag
     5221 cctggagaaa ccaagaccct gatctggcag ttcgggcaag ccggtgtggt tgaagtggcc
     5281 tgccatgtac cgggacacta tgaggccgga atggttgcac aggtgaaggt tggggaactt
     5341 aaataggaaa ggctgcataa aggccagcat ggatgcgtgc gacctctgag gtgaagt
//
LOCUS       DASQSL010000359         1374 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_153937, whole genome shotgun sequence.
ACCESSION   DASQSL010000359 DASQSL010000000
VERSION     DASQSL010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1374
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153937"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..321)
                     /locus_tag="VE844_03620"
     CDS             complement(<1..321)
                     /locus_tag="VE844_03620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HZC00469.1"
                     /translation="MRTPSANTKSSPSLVPVITATKKLWRQYHLTYDQTHHVAKAVRR
                     ALAIERPKARTRMVARLSREEERQLIAHAYRVQGTRGLLIKTLFQTGARVSEFVNIKA
                     NEVFF"
     gene            complement(497..1213)
                     /locus_tag="VE844_03625"
     CDS             complement(497..1213)
                     /locus_tag="VE844_03625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007917964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
                     /protein_id="HZC00470.1"
                     /translation="MNPPPATNPYKRHRFPAEIISHSVWLYYRFSLSYRDVEELMAER
                     GVTLSHEAVRYWCRKFGQAYANALRRRRPRPGDKWHLDEVFLTINKARHYLWRAVDQD
                     GHVLDILVQRRRNTVAAKKFFRKLLKGLTYVPRVMVTDQLKSYEAAKQEILPSVEHRQ
                     HRYLNNRAENSHQPTRQRERTMRRFKSAGHAQRFLAAHGPILSHFRPRRHRLRAREYR
                     QEMAHRWHIWREITATEAAA"
BASE COUNT          276 a          370 c          420 g          308 t
ORIGIN      
        1 aaagaacacc tcgttcgctt tgatgttcac gaactccgag actcgggcac ccgtctggaa
       61 cagggtcttg atgagcaatc ctcgggtacc ctgcacccga tacgcgtggg caatgagctg
      121 gcgctcctcc tcgcgggaga gccgtgcgac catacgcgtg cgtgccttcg gccgttcgat
      181 ggctaaggcc cgccgcacgg ccttggcgac gtggtgcgtc tggtcatagg tcaggtgata
      241 ttgccgccag agctttttag tggcggtgat gaccggtacg aggctgggtg atgatttcgt
      301 gttcgcggat ggagtacgca taagtcccta ctttgagtat actggagagg tcaattcgcg
      361 tcaaaagtgg tcgtttattt cgcgcttccg gcgttcggcg aaatgaaaat tcgacctttt
      421 aggatggtac tgtcaaacta accgattcca aggcgatcac agagataccg agggtgagtc
      481 gccagcaggt gttctcttat gcagccgcct ctgtagccgt gatctcccgc cagatgtgcc
      541 atctgtgggc catctcctgg cgatactctc gggcgcgaag gcggtgacgt cggggacgga
      601 agtgtgacag gatggggcca tgcgcagcga ggaagcgttg cgcgtgacct gccgacttga
      661 atcgccgcat ggtccgctcg cgttggcgcg tcggttggtg ggagttctca gcccggttat
      721 tgaggtaccg gtgctgccga tgttccacac tgggcaagat ctcttgtttg gcggcttcgt
      781 agctcttcag ttgatcggta accatcacgc gcggcacata cgtcaagccc ttcaacagct
      841 tgcggaagaa cttcttcgct gcgactgtat tgcgccggcg ttgcaccaag atgtccaata
      901 catggccgtc ttggtcgaca gcccgccaca ggtagtgacg cgctttattg atggtcaaga
      961 agacttcatc gagatgccac ttgtccccag gtctgggacg ccggcgacgt aacgcattcg
     1021 cataggcctg gccaaacttt cggcaccagt accgcacggc ttcgtgcgac agggtgacgc
     1081 cacgttccgc catcaactcc tcgacatcgc gatagctgag ggagaagcgg tagtacagcc
     1141 acacgctgtg gctaatgatc tccgcaggga agcgatgacg cttgtaggga ttggtagcag
     1201 gtggtgggtt catgctgtga gtatgccaca ctgcgccgaa acgggacagg atacccgctt
     1261 aatttgacag tacccaaaat acttcgtccc gggtttgcgg aatcgaatgg cgacgatacg
     1321 atgattggca tccgtataga agaaggcgag ccatcccgca cgtttcagca ggca
//
LOCUS       DASQSL010000360         1486 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_98067, whole genome shotgun sequence.
ACCESSION   DASQSL010000360 DASQSL010000000
VERSION     DASQSL010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1486)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1486
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98067"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(254..1270)
                     /locus_tag="VE844_03630"
     CDS             complement(254..1270)
                     /locus_tag="VE844_03630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018418421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZC00471.1"
                     /translation="MKLYGGIDLHSNNCVVVLLDEEDHVVYEKRLSNDLGYLLLELAP
                     YQGMIEGVVVESTFNWYWLVDGLMEAGYPVHLANTGAIVQYAGLKYTDDRSDARWLAH
                     LLRLRLLPEGYIYLEEERAVRDLLRKRSQLVRQKVTHILSIQNLMSRNKGMRLSADKI
                     RQLSDAEVEGLLPQADLARAVKSNLAVYRCLVEEIDGLEKVVKRRVKLRPNFRHLLTV
                     DGIGSILGMTIMLETGDIGRFERVGQFASYCRCVDSHKISNGKRKGSGNTKNGNNYLA
                     WAFIEAANFAIRYNPKVKRFYQRKKDKTNGMVALKAVAHKLARACYYILRDQEPFQVE
                     KAFG"
BASE COUNT          329 a          466 c          338 g          353 t
ORIGIN      
        1 aagcgtcgga cagggaagtc cgagcactga gggtggcaat cactgatgac gctgtcgatg
       61 acaggctcga tggcttggtc ccccgcagga gtaccttcca acccttcgct ggctcacggt
      121 cgaggcgtat ccgctaaaac ctgttacctt cacggactac cgaattaaag ggtgggacag
      181 cggccaatca gactctttgg ttctaagcca acccctattc gagcttcgct gtcccagcca
      241 aaccgttatt cgctcatccg aaggccttct ccacctgaaa gggctcttga tcccgtaaaa
      301 tgtaataaca ggcccgggcc aacttgtggg cgaccgcttt gagcgccacc atcccgttgg
      361 tcttgtcttt cttgcgttga tagaaccgct tcaccttggg gttatagcga atggcgaagt
      421 tcgccgcttc gataaaagcc caggctagat agttgttccc gttcttggta ttgccgctgc
      481 ccttgcgttt gccattacta atcttgtgac tatccacaca ccggcaatag gaggcaaact
      541 gacccacccg ctcaaagcgg ccgatatccc ctgtctccag catgatggtc attcccagaa
      601 tcgaaccaat gccatcgacc gttagcaggt gccgaaaatt tggccgcagc ttcacccgcc
      661 gtttcacaac cttctccagc ccatcaattt cctcaaccag acaccggtat accgcaaggt
      721 tgcttttcac cgcccgcgcc agatccgctt ggggaaggag cccctcgacc tcggcatcac
      781 tcaattgccg gatcttatca gcgctcagtc gcatcccctt gttgcggctc atcaggtttt
      841 gaatgctgag gatgtgcgtc accttctgcc gcaccagttg gctgcgcttg cgcaacaggt
      901 cccgcaccgc ccgttcctcc tccagataga tatatccttc gggtaatagc ctcaatcgca
      961 agagatgcgc taaccagcgg gcatcgctgc gatcgtcggt atacttgagc cccgcatact
     1021 gcacaatcgc ccctgtattg gccaagtgca ccgggtagcc tgcttccatc aaaccatcca
     1081 ccagccaata ccaattgaac gtcgattcca caaccacacc ctcgatcatc ccctggtacg
     1141 gcgcgagctc tagaagtaga taccccagat cattcgacaa ccgcttctca tagaccacat
     1201 ggtcctcttc gtccaacagc accaccacac aattgtttga atgcaggtca attccaccat
     1261 atagtttcat cgtcggcctc ctctattgag cgttcagttt gggtaattac atccttccca
     1321 aactgtaccg ctcgatggtg gtgccggcta gatgattatc agactgatat tttattcctg
     1381 ctggagttat acttacggga caggttacac tgtgaagata caggatgcct cgccaacccc
     1441 ggattaccgg atatagtcga cggagatgtc accaccccgc gcctct
//
LOCUS       DASQSL010000361         1008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_71484, whole genome shotgun sequence.
ACCESSION   DASQSL010000361 DASQSL010000000
VERSION     DASQSL010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71484"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(25..214)
                     /locus_tag="VE844_03635"
                     /pseudo
     CDS             complement(25..214)
                     /locus_tag="VE844_03635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780187.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003729 - mRNA binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
     gene            complement(215..433)
                     /locus_tag="VE844_03640"
     CDS             complement(215..433)
                     /locus_tag="VE844_03640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002765634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HZC00472.1"
                     /translation="MLRAYTAKYTKINAGYMGQLIEWPEVVTEGRTIEQCREMLQDAL
                     HEMITAYQQQEKEIPTGGALLEQIPVEI"
     gene            complement(587..>1008)
                     /locus_tag="VE844_03645"
     CDS             complement(587..>1008)
                     /locus_tag="VE844_03645"
                     /inference="COORDINATES: protein motif:HMM:NF013087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008171 - O-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HZC00473.1"
                     /translation="DKENEMLKVAEAFVAQYGLRDRVRMQPGDMLTDPFPAADLHLFS
                     AIYHHWPQDRCRVLAAKSFASLKPGGRVIIHERPYDDTRTGPLAVAAMTMAALLRGEA
                     GRYSARDYSSMLREAGFVEVEVKPTTGYWQIITGRKP"
BASE COUNT          191 a          289 c          273 g          255 t
ORIGIN      
        1 gcgcgtgaga tcaggacatg cccatcagaa tttaggcgtt aatccagctt gtttgcacag
       61 ctcgttggcg gtgattcggt cgataacacg atgtctttat gatgggcact gttttctcgc
      121 cgttcgtgta aattgagtgt tttccgcctt cccgcagcag gcagaagccg ccttcttcga
      181 aatacttgat gagatcacgg cgtttaaccg acattcaaat ctcgaccggt atctgttcca
      241 gcagggcgcc accggtaggg atctctttct cttgctgttg gtatgccgtg atcatctcgt
      301 gcaacgcgtc ttggagcatt tccctacact gctcaatcgt tctcccttcg gtgaccacct
      361 ccggccattc gattagttgt cccatgtagc cggcgttgat ttttgtatat ttggcggtat
      421 atgcccttaa catgcgctta tctcgcgtcc gctagaagaa ttctctctat actggccgct
      481 cagccaggca tcggtgcatc aaaccaattc cctcatgtcg atgcgatcgc cctgttggct
      541 tgtactcgat tgtagcggaa atgcggtgag ctgtctacca accccctcat ggcttgcggc
      601 cggtgatgat ctgccaatat ccggtggtgg gcttcacctc gacctcgaca aatcctgcct
      661 ccctgagcat gctagagtag tcacgggccg agtagcgccc ggcctctccc cgcaggagcg
      721 ctgccatggt catggcggcg acggcgagag ggcccgtacg ggtatcatcg taggggcgtt
      781 cgtggatgat gacgcgtccc ccaggcttca ggctggcgaa actcttggcg gccagcacgc
      841 ggcagcggtc ctgcggccaa tgatgataaa tcgccgagaa caggtggagg tccgctgccg
      901 ggaatgggtc agtgagcata tccccaggct gcatccggac gcgatctcga agaccgtatt
      961 gcgcaacgaa cgcctctgca accttaagca tctcgttttc tttatcaa
//
LOCUS       DASQSL010000362         1084 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_3099, whole genome shotgun sequence.
ACCESSION   DASQSL010000362 DASQSL010000000
VERSION     DASQSL010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3099"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            340..531
                     /locus_tag="VE844_03650"
     CDS             340..531
                     /locus_tag="VE844_03650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00474.1"
                     /translation="MQAKQVLHNLLQKIGSQMHKMRRTALAVNMMGALHGEVLTVTQL
                     GRSITSRAKEKHCIKRADR"
     gene            547..>1084
                     /locus_tag="VE844_03655"
     CDS             547..>1084
                     /locus_tag="VE844_03655"
                     /inference="COORDINATES: protein motif:HMM:NF033591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC00475.1"
                     /translation="MQAERLGLYCSLTQWLIGAKQCPVIIVDWSDLDECKRHFLLRAS
                     VPLRGRSLTLYEEVHTAKSKEKPAVHRRFLQCLQAMLPPNCRPIMVSDAGFRTPWFKQ
                     VEALGWDWVGRIRNRHQVQLGGKDAWIPCKALYDKATPPPKALGPARLTLSNPIGCQL
                     VLYKAKPKGRIHLNRFGKA"
BASE COUNT          253 a          289 c          306 g          236 t
ORIGIN      
        1 ggggttggcc aatcaacgtg cgatgggcac ggacatagta gaggagaaca ccatgaaggt
       61 taaaaccaag gttcgcggtg gatcgagagt ttgtgggcct gtatacgcct agcgtgagat
      121 ccttagcgtg agcttctagg aggggggtac tgtgtgctcc cctcctagtt ccgagggaac
      181 gggaacgtcg ccatttttcg cgaaacccga aatgggtcta atcctgaagt atccccacaa
      241 ataaaactgt tttatcagcc agttattaag aaaaggaacc tgcatgatgg ttgacgatct
      301 caccgattgg taaccatacc aataaaagga gatcacatca tgcaggcaaa acaagtatta
      361 cataacctcc tccagaagat cggttcacag atgcataaga tgcgtcgcac ggccctggcc
      421 gtgaacatga tgggcgccct tcacggggag gtgctcaccg tgacgcagct cggtcggtcc
      481 atcacgagtc gcgcaaaaga gaaacactgt atcaagcgag ccgatcggtg actgtctaat
      541 cgccgcttgc aggccgagcg cttaggcctt tattgctcgc tcacgcaatg gcttatcggc
      601 gccaagcagt gcccggtgat tattgttgat tggtccgacc tggacgagtg taagcgtcat
      661 tttctactgc gtgcctcggt gccgctgcgc ggtcggtcgc tgactttata tgaggaggtg
      721 catacagcca agagcaagga aaagcccgcg gtccatcggc gttttctgca atgcctccag
      781 gccatgctgc ccccgaattg tcgtcctatc atggtctccg atgcggggtt tcgcaccccc
      841 tggttcaagc aagtcgaagc cttgggctgg gactgggtcg ggcgcattcg caatcgacat
      901 caggtacaac tggggggcaa ggacgcgtgg ataccgtgta aggccttgta tgataaagcc
      961 actcccccgc ctaaggcgct aggcccagcg cgcttgacct tgagtaaccc catcgggtgt
     1021 cagttggtgc tctataaggc caaacccaaa ggccgcatcc atctcaaccg ctttggcaaa
     1081 gcct
//
LOCUS       DASQSL010000363         2000 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_71498, whole genome shotgun sequence.
ACCESSION   DASQSL010000363 DASQSL010000000
VERSION     DASQSL010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2000
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71498"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..439)
                     /locus_tag="VE844_03660"
     CDS             complement(<1..439)
                     /locus_tag="VE844_03660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011566022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HZC00476.1"
                     /translation="MAEEARQENKNRPNIVFVLIDDALLGVQNPVMPGLQNNVISQGV
                     KFSNTVSTLPLCGPGRATIQRGQYSHNTRIFGNSLPIGGWEKFQQQGMHRSTFATWIN
                     ERGYATGLFGKYLNNYRDRLIPPGWDRWYAWDGQKQGWQSVNDQ"
     gene            complement(1032..1181)
                     /locus_tag="VE844_03665"
                     /pseudo
     CDS             complement(1032..1181)
                     /locus_tag="VE844_03665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011950708.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(1737..>2000)
                     /locus_tag="VE844_03670"
     CDS             complement(1737..>2000)
                     /locus_tag="VE844_03670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00477.1"
                     /translation="TRTCIACVGQYHRNTLWGGQMHLYGSRNLVNERDFVEVWLELLG
                     YPFRLLHVLDRLRNTEHSLECLSNAPLRIVGDPCAIETLVEVR"
BASE COUNT          390 a          588 c          570 g          452 t
ORIGIN      
        1 cttggtcgtt gacagactgc cagccctgct tttgcccgtc ccaggcgtac cacctatccc
       61 aaccgggtgg gatgagccga tcccgatagt tatttaagta cttcccgaac agccccgtag
      121 cgtagccccg ctcgtttatc caagtggcga acgtggagcg gtgcatcccc tgctgctgga
      181 acttctccca acccccgatc ggcaagctgt taccgaagat gcgcgtgttg tgcgagtact
      241 ggccccgttg tatcgtcgcg cgtcccgggc cgcacaaggg caaggtggac acggtgttgg
      301 agaactttac gccctgactg atgacgttgt tttgcagccc cggcatcacg gggttctgca
      361 cgccgagcaa ggcgtcatct ataaggacga acacgatgtt cggcctgttc ttgttctcct
      421 gcctcgcctc ttcggccatg cccgcagtct accttcacct gtcaactagg tcacccagtg
      481 agtattatcg tccctattca cggaacgtcg tagaagagga attccgcgat cttcaggctg
      541 agagtactct cggaagttgc gttggtaagc ggactgcgtt ctcgttcagt ccgctgcttg
      601 cttgaggacg tattcaccgt caccctcgcc gatgacgaca aagtcgcatt ttccagaacc
      661 cggacggagg cgatgttgtg cttggcgaca cccgtctgaa gagggtggcg tacctccacg
      721 tggaccagga actccgagag cgcctccgtg acgaggccct taccccagta ctacctcccg
      781 agctagtagc cgacttctct ttggccgcat ttctcgaagc tcacgattgt gccggctacg
      841 cgccccccaa gagcaccgtc ctcttgatga cgctctcgtc ggccaggatt ttggtccagt
      901 tcggcatgaa cgcatccccg tccctagccg gaaaaggagc catacgggat ttgactccgg
      961 ctcccgctag tgctcgaaga atgtgggagg ctcgtcctta gttaccttcc gcagcagtac
     1021 gtttccccgc gtagcgcggc gttgagccgc tcgaaggttg cgtatatgcg ccatctccta
     1081 aaccaccagt aaacactctg ccaaggcgga acgtcgcggg gcaagagccg ccacgggcag
     1141 ccgctcttga gcacgtagaa tatgacgtcc aggatctcgc gggagatgtg gattttcggt
     1201 catcctcgct tattgggagc cgggacatgg agcttcaagc acccccattc ggctcggata
     1261 gatctgtggg gtagctcctt ttcatgccct agagcgtacg tcatcgacct accccgctcg
     1321 cttttcctaa caatttctag aagccccgtt ccccgaagtg cgcgttgagg acgctctccc
     1381 aagtgcgtga ggagaagtag aacccagtca tcggagccag tcgtaaccct aaacctggcc
     1441 tttaggcaag gggtgagagc ggtagacctt gcatcgggcc ggctagaggg ggtaggctgg
     1501 gataagcttg agggcggggt cttggcacac gcagcctcgg ggtccgtcgg agggggagta
     1561 gtagggtccc cgaagcaagg ctgcatgttg ttgggtcccg ccctctaagc catccgactc
     1621 tgaagctgtg ccctgttgct ctgggccgct ttagccgagc tctggttggg agtagaggta
     1681 ggtagagtgg cctcggccct tgctgacccc ttgtttcatg aatgccgtct tacgtttcag
     1741 cgaacttcca caagagtctc gatggcacac gggtcaccaa ctatgcgcag tggcgcattt
     1801 gagaggcatt cgaggctatg ttcggtattc cgcaagcgat cgagcacatg aaggagccgg
     1861 aaaggatatc cgagaagttc aagccatacc tctacgaagt ctcgttcgtt gacgaggttt
     1921 cgtgatccat acagatgcat ttggcctccc cacagcgtat tgcgatgata ttgacccaca
     1981 cacgctatgc atgtacgagt
//
LOCUS       DASQSL010000364         1182 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_126509, whole genome shotgun sequence.
ACCESSION   DASQSL010000364 DASQSL010000000
VERSION     DASQSL010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1182
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126509"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            243..491
                     /locus_tag="VE844_03675"
     CDS             243..491
                     /locus_tag="VE844_03675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00478.1"
                     /translation="MRAQVRAQEFDHVGLQRVDARQGPFQAVDGDPPLLQVDIGTLQQ
                     SDFGRTQPVAIRQQKERLVALVLNHGKQALEFLLGQEL"
     gene            complement(666..830)
                     /locus_tag="VE844_03680"
     CDS             complement(666..830)
                     /locus_tag="VE844_03680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00479.1"
                     /translation="MKDMVEELTATHEDVRYIRTTVSLLVRNDVAQDAAIKTLSARVA
                     RLEKKVGLAN"
BASE COUNT          211 a          339 c          352 g          280 t
ORIGIN      
        1 tggtcagctg ggcgtaccgg gtggtgttct gcacgttctt gtggcccacc caatcctgca
       61 cgaagcgcag ctctccccgt gcgtcgagca gatgcgtggc gatcgagtgc ttgaggctat
      121 ggaacttcca cttctccggc ggcaggccgg ctttcttccc ataggtctgc atggcgcacc
      181 acaacgtgcg ccgatcgatg ggcaccccac ggttggagat gaagagatag ggcgaggcgt
      241 tcgtgcgcgc gcaggtacgc gcgcaggagt ttgatcacgt cgggctgcaa cgggtagatg
      301 cccgacaggg accctttcag gcggtggatg gtgatccgcc cctgcttcag gtcgacatcg
      361 gtacgttgca gcagtccgat ttcggacgca cgcagcccgt ggcgatacgc cagcagaaag
      421 agcgccttgt cgcgcttgtc cttaatcacg gtaaacaggc gcttgagttc ctcttgggtc
      481 aggaactgta gtgtgccgga gccgcgccgg gtcctagggt tggaagattt tgaggtcgcc
      541 atatactgga cagaatacct gttcggtcca attctggcaa atccccctca cataagtatg
      601 cgacaaaccc caccatcagg cggggtcatt ttttatcgta ctgtctagtt tgcagataat
      661 aggggtcagt tggccaagcc gactttcttc tcgaggcggg cgacgcgagc gctgagcgtt
      721 ttgatggcgg catcctgcgc cacatcgttg cggaccagca ggctcaccgt cgtgcggata
      781 taccgcacat cctcatgcgt ggcggtgagt tcctccacca tatccttcat gatcccctgt
      841 cagttcacct ttcagcaagg cgacttgcgc atccgcatgc ttctgcgcct cggtgaagct
      901 gtggttgatc atggctgcga ggtcatcaag cgttgtcggt tttggtgggt gtttctttgt
      961 catatgtgtc caccataagc aacgccaggg cttcagtcaa ggtgtggtcc tgtggcagcc
     1021 ccgccttgca attcacaacc cattgttttt atactgtctt tgccgagttg tgatgtaccc
     1081 tccgagggag ggagtccaac tcaccccagc cccgggccgt cgcgcctggg gcgtctcttg
     1141 ccttggaaag tgagtcatcg catggctgag ccagtatcac cc
//
LOCUS       DASQSL010000365         1250 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_140108, whole genome shotgun sequence.
ACCESSION   DASQSL010000365 DASQSL010000000
VERSION     DASQSL010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1250
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140108"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(164..637)
                     /locus_tag="VE844_03685"
     CDS             complement(164..637)
                     /locus_tag="VE844_03685"
                     /inference="COORDINATES: protein motif:HMM:NF015438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HZC00480.1"
                     /translation="MGEVVSIHLVRQRDGAAEAVDRVMALTNYGIDGDWRSRQNRGGQ
                     LTLIEAEVLEEIGRIVGYPVAPGASRRQIVVRGVKLNELIGQRVRVGAVRLFVETPCD
                     PCARMEKTIGAGAWAALEGRGGVRCHVLAGGEICIGDPLIEEPFQEEVLGRAAAR"
     gene            complement(1000..>1250)
                     /locus_tag="VE844_03690"
     CDS             complement(1000..>1250)
                     /locus_tag="VE844_03690"
                     /inference="COORDINATES: protein motif:HMM:NF013595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00481.1"
                     /translation="IANLIGDAQVMSKWGQQSIDANPDMMKARRRARSLEPEWRFCFP
                     TAVDFDPETDRIIVAESQRNRLQIYRKVRDYVDFQANL"
BASE COUNT          260 a          392 c          339 g          259 t
ORIGIN      
        1 cagcaattgt cgttcctttc cgagcgtcta aatctacgcc acacacccgg ctgctggcat
       61 gcttcctccg ttaacggggg tagcgtatgc ctgagaggtc agcctggagc gactagggaa
      121 attgggccag cgctcgtgaa ggctggcgac ctggcagtca gcttcacctg gctgctgccc
      181 tccccaggac ctcctcttgg aatggttctt cgatgagggg atctccaatg cagatctctc
      241 cccctgccag cacatggcag cgcaccccac cgcgtccttc cagtgctgcc caggcgcctg
      301 ccccaatcgt cttctccata cgtgcacatg gatcgcaagg ggtttcgacg aagaggcgta
      361 cggcgccaac gcggacgcgc tggccaatca gttcgttgag cttaacgccg cggacgacga
      421 tttggcgacg actcgcccct ggcgctacgg gataacccac aatacgaccg atctcttcca
      481 gcacttcggc ctcaatcagg gtgagctgac caccacgatt ctggcgtgag cgccaatccc
      541 catcgattcc gtagttcgtc agtgccatca ctcggtcgac ggcttccgct gccccatctc
      601 gctgccgtac gaggtgaata gacacaactt cccccatgta tcctctccta tcgccgtggt
      661 gtgatacaag cccggctacc ctacaaagcc agggccgttc tttcccaaca aatgaccacc
      721 gcaaagatta gctggcgagc gcttcaaaaa agtcgggtat tctcactgtg acatgccggc
      781 tgccatttgc tgagagaaaa ttgctgcaga ggcgcaattt gaaggagatt actaagataa
      841 gacgtatacg atgggagtat ctccacagaa actgcggagt tcgtgtaaga gtcgcccctg
      901 cccgccccct ggctgaccga acaccgaagg aggcaggagg ggtcgacgca tgtttacgaa
      961 ataaacggca atcgctcact cacgaaacgg ccacgcccgt tacaggttcg cctggaaatc
     1021 gacgtagtcg cgaaccttgc ggtaaatctg caggcggttt cgctggctct cggccacgat
     1081 aatgcggtcg gtttccggat cgaaatcgac ggccgtcggg aaacagaagc gccattccgg
     1141 ctccaggctc ctggcccgtc gtcgggcttt catcatgtca gggttggcgt cgatgctctg
     1201 ctgtccccac ttggacatca cctgcgcgtc accgatgaga ttcgcgatcg
//
LOCUS       DASQSL010000366         3118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_98104, whole genome shotgun sequence.
ACCESSION   DASQSL010000366 DASQSL010000000
VERSION     DASQSL010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3118
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98104"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1069)
                     /locus_tag="VE844_03695"
     CDS             complement(<1..1069)
                     /locus_tag="VE844_03695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020464899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HZC00482.1"
                     /translation="MDNTQTHALVEKAWSGSILAELIDYIRIPNKSPAFDPHWQEHGY
                     MEEAIAQFERWARIQAIEGITVEVGRLSGRTPLLFIDIPGPSQEGVLLYGHLDKQPEM
                     TGWRSGLGPWEPVLEGDQLYGRGAADDGYALFAALTAMAALKAQRLPHARCVVIIEAC
                     EESGSFDLPAYIDALGERIGDPSLVICLDSGCGNYDQLWCTTSLRGLAGGVLTVEILT
                     EGVHSGDASGIVPSSFRILRQILSRLEDEHTGHILPQAFQVNIPAERQQQARIAAETL
                     ASAVFTKFPWQKGATPLSRDPYELILNRTWRPALSIVGAGGLPLPENAGNVLRPWTSV
                     KLSLRLPPTCDARLASSKLKTL"
     gene            1206..1967
                     /locus_tag="VE844_03700"
     CDS             1206..1967
                     /locus_tag="VE844_03700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013442853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HZC00483.1"
                     /translation="MAVLRAMLFYMGVSMALLVVYTPLALIMLPLPYRLRYRTMTSWT
                     HFALWWLEKTCKLNWRVEGLEHIPKGPAIIMCKHQSAWETMSLQLIFPPQVWVTKREL
                     LWLPLFGWCLAVLEPIAIDRKASRLALRRMIEQGTARLKAGRWIVVFPEGTRVAPGQK
                     RPYAPGGGMLAEKTGYPVVPVAHNAGLFWPRHSIIKHPGTIDLRIGPTIESKGKTTRD
                     IMAQVESWIETASDHLLASSTPLNRASRKAANGSA"
     gene            complement(1927..2793)
                     /gene="trxA"
                     /locus_tag="VE844_03705"
     CDS             complement(1927..2793)
                     /gene="trxA"
                     /locus_tag="VE844_03705"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HZC00484.1"
                     /translation="MNSLNPIIEANQDNFNSQVIERSKQLPVMVDFWAPWCAPCRVLK
                     PILEKLAEEYAGKFVLVTVNTDQNSRLALDYAIRSIPAVKLFRHGQVIEEFLGAQPER
                     VIRTMLERHLERASDRLRASASMARRRGDLPSAEQLLSQALEQDPENHRIHPELAQLL
                     LDLGDYDRAEAILKKLPANEQHEAPITALSIRLKFARIAQETPPESALKQAIAADPGN
                     ARARYQLSARQILKDQFEPALENLFEILRRGDRQFGDDAARKAILDIFILLGGTDPLV
                     KRYRSLLSSMLY"
     gene            2893..>3118
                     /gene="dapF"
                     /locus_tag="VE844_03710"
     CDS             2893..>3118
                     /gene="dapF"
                     /locus_tag="VE844_03710"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011238050.1"
                     /note="involved in lysine biosynthesis; DAP epimerase;
                     produces DL-diaminopimelate from LL-diaminopimelate;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HZC00485.1"
                     /translation="MEVPFTKMQGLGNDFVLFNGLRSPLCLTPEQVRRIADRRLGIGC
                     DQVLLLEPGQDPEADARYRIFNADGKEVEQC"
BASE COUNT          670 a          867 c          910 g          671 t
ORIGIN      
        1 gcagggtctt gagtttactt gaagctaacc tggcgtcaca agtcggtggc agacgcaaag
       61 acagcttgac tgaggtccag gggcgcagta cattgccggc gttttccgga agtggcaacc
      121 ccccggcgcc gacaatggat agggcgggcc gccaggtgcg attcaggatc aattcataag
      181 ggtctcggct taagggcgtg gccccctttt gccacggaaa cttggtgaag acggcgctag
      241 cgagcgtctc tgctgcgatc cgggcttgct gttgccgctc agcggggata tttacctgga
      301 aagcttgagg caggatgtga ccggtatgct catcctcgag gcggctcaag atctgcctta
      361 agatccgaaa gctcgagggc acgatcccac tcgcatctcc cgaatgcacc ccttcggtca
      421 ggatctccac cgtgagcacg cctcccgcca agccccgcag cgaggtcgtg caccagagct
      481 gatcatagtt tccgcagccg gaatcgaggc aaatgaccag gctcggatca ccgatgcgct
      541 cccctagggc gtcgatgtaa gcgggcagat caaaactgcc gctctcctcg caggcctcga
      601 tgatgaccac acagcgggca tgaggcaacc gctgggcttt gagggcagcc atagccgtca
      661 gtgctgcgaa cagcgcatag ccgtcgtccg cagcaccccg tccatagagc tgatcgccct
      721 cgagcactgg ctcccagggg ccaagaccgc tccgccagcc cgtcatctcc ggctgtttat
      781 ccaagtgccc atagagcagc acgccctctt gggagggacc tggaatatcg atgaacagaa
      841 gcggcgtgcg tccggataag cgccccactt ccacggttat gccttcgatg gcttggatcc
      901 gggcccagcg ttcgaactgg gctatggcct cttccatata gccatgctcc tgccagtgcg
      961 gatcaaaggc aggggatttg ttcgggatgc ggatgtagtc gatcagttca gcaaggatcg
     1021 agccactcca ggctttttcg acaagcgcgt gtgtttgcgt gttatccata aaacgggtta
     1081 caacggcgat gatgcgattg aggtcctctg taaaaagtaa acgcctgggc gtagcttaag
     1141 cgtgcccgag ccaagtagca tattaagtca tttcgaaact gagagaaatt ggaggatatc
     1201 agcccatggc ggtgttacgt gcaatgctgt tttatatggg ggtttctatg gccttgctag
     1261 tagtatatac cccactcgct ttaatcatgc ttcccctgcc gtaccggtta cgctatcgga
     1321 ccatgaccag ctggacccat tttgccctct ggtggctgga aaaaacctgc aagctgaact
     1381 ggcgtgtcga gggtctcgag catatcccca aaggtccagc tatcattatg tgcaaacatc
     1441 aatcggcctg ggagacgatg tcgctgcagc tcatcttccc gcctcaggtc tgggtgacca
     1501 aacgcgagct cctgtggctg cctttgtttg gctggtgtct ggccgtgctc gagcccatcg
     1561 ccatcgaccg caaggcgagc cgcctggccc tgcggcgtat gatcgagcag ggcaccgcac
     1621 gcctcaaggc gggacgttgg atagtcgtct tccccgaggg aacccgggtc gccccggggc
     1681 aaaaacgtcc ctatgcgccg ggcgggggga tgctggctga aaagaccggc tacccggtgg
     1741 tcccggtggc ccataacgcc ggcctatttt ggccgcgcca tagcattatc aagcatccag
     1801 ggaccatcga tctgaggatt ggcccgacca tcgagagcaa aggcaagacc acgagagaca
     1861 tcatggcgca ggtggaaagc tggattgaaa ccgcctcaga ccatcttctg gcctcgagca
     1921 ccccgctcaa tagagcatcg aggaaagcag cgaacggtag cgcttgacca gcggatccgt
     1981 tccaccgagc agaataaaga tatcaaggat agctttgcgg gccgcatcgt cgccgaactg
     2041 tcggtcccct cgacggagga tctcgaagag gttctcgagc gcaggttcaa attgatcttt
     2101 taggatctgc cgggcgctca attgataccg tgcccgagcg ttgccagggt cggccgcgat
     2161 agcctgttta agcgccgatt cgggtggggt ctcttgggcg atccgggcaa acttgaggcg
     2221 gatggaaagg gcggttatgg gtgcttcgtg ctgttcattg gcaggcaatt tcttcaagat
     2281 ggcctcggcg cggtcgtaat ctccgagatc caggagtagc tgagccaact ccgggtgaat
     2341 gcgatgattc tcagggtcct gttccagcgc ttgactcaat agctgttcgg cgcttggcag
     2401 atcgccgcgc cgtcgagcca tgctggctga ggcgcggagg cgatccgagg cgcgttcgag
     2461 atggcgctcc agcatcgtgc ggataacccg ctccggctgt gccccgagga attcctcgat
     2521 gacttgaccg tggcgaaaga gctttacggc agggatactg cggatggcgt agtcgagcgc
     2581 aagccttgaa ttctgatcgg tattgacggt aacgagcacg aatttacccg catactcttc
     2641 cgccagtttc tccaggatag gcttcaagac ccggcaaggc gcgcaccagg gcgcccagaa
     2701 atcgaccatg accggcagct gcttggatcg ctcgatcacc tgggaattga aattatcctg
     2761 gtttgcttca ataattgggt ttaaactatt cataattaca ataatttgta tgcgattctt
     2821 cgcattttag tttaaaatat tacatacaca tctcatttat agagtttata ccaataattt
     2881 tatcatcgaa taatggaagt gccatttacc aagatgcagg gcctgggcaa tgactttgtc
     2941 ctgttcaatg gcctgcgatc cccgctatgc ctaacacccg aacaggtacg caggatcgcc
     3001 gatcgacgtc tgggcatagg gtgtgatcaa gtgctattgc tcgagcctgg ccaagaccca
     3061 gaggccgatg cgcgttatcg gatcttcaac gcggatggca aagaggtcga acaatgcg
//
LOCUS       DASQSL010000367         1076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_153995, whole genome shotgun sequence.
ACCESSION   DASQSL010000367 DASQSL010000000
VERSION     DASQSL010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153995"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1024
                     /locus_tag="VE844_03715"
     rRNA            <1..1024
                     /locus_tag="VE844_03715"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          246 a          268 c          360 g          202 t
ORIGIN      
        1 agccgcggta atacgtaggg ggcaagcgtt gtccggaatt attgggcgta aagcgcgtgt
       61 aggcggtttc gcacgtccgg tgtgaaagcc cagggctcaa ccctggaagt gcactggata
      121 cgacggagct ggagtactga agaggagagc ggaattcccg gtgtagaggt gaaattcgta
      181 gatatcggga ggaacaccag tggcgaaggc ggagacctgg gccgatactg acgctgaggt
      241 gcgaaagcgt ggggagcaaa caggattaga taccctggta gtccacgccg taaacgatga
      301 gaactagccg ctggggagat tttgctcttt agtggcgtag ctaacgcgtt aagttctccg
      361 cctgggaagt acggccgcaa ggttgaaact caaaggaatt gacgggggcc cgcacaagcg
      421 gtggagcatg tggtttaatt cgatgcaacg cgaagaacct taccagcctt tgacatcccg
      481 cgctaacctg agagatcagg ggttcccttc ggggacgcgg tgacaggtgc tgcatggctg
      541 tcgtcagctc gtgtcgtgag atgttgggtt aagtcccgca acgagcgcaa cccttgtccc
      601 tagttgccag cggttcggcc gggaactcta gggagactgc cggtgacaaa ccggaggaag
      661 gtggggatga cgtcaagtca tcatggccct tatgggcagg gctacacacg tgctacaatg
      721 gctggtacaa agggtggcca acccgcgagg gggagccaat ctcaaaaagc cggtctcagt
      781 ccggatcgga gtctgcaact cgactccgtg aagtcggaat cgctagtaat cgcggatcag
      841 caccgccgcg gtgaatacgt tcccgggcct tgtacacacc gcccgtcaca ccacgaaagc
      901 gggcaacacc cgaagccggt gggctaaccc ttacgggagg cagccgtcga aggtggggct
      961 cgtgattggg gtgaagtcgt aacaaggtag ccgtagggga acctgcggct ggatcacctc
     1021 ctttctaagg atttggccga aagcgccgga gctagcctct ggaagtgctt cgtccg
//
LOCUS       DASQSL010000368         1133 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_3147, whole genome shotgun sequence.
ACCESSION   DASQSL010000368 DASQSL010000000
VERSION     DASQSL010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3147"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(43..927)
                     /locus_tag="VE844_03720"
     CDS             complement(43..927)
                     /locus_tag="VE844_03720"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HZC00486.1"
                     /translation="MVDMTTTQSLQMFLRALQGQNYSPKTLRAYGDDLHQFLAWVQNN
                     RVDWDTPTRMSRADIEGFMQYLSAQRMSGVTRVRKLAAIRKLFAFMAENKILAGNPAN
                     TVKGARREEKEPNILYKEQYKALLYEASDNIRDYAIIQTFLQTGIRLSELVNLRVDDV
                     DFAHRMLTVRQGKGKKDRQIPLVDEAVKALRNYLRYRNTEWIEDDEIFFLAKNGTSLN
                     VSTVKYIVAKYVKKAGIRKKVSVHTLRHTFGAHKADKHMSLATLQELMGHKKKETTLK
                     YIHLAKTNLRQEMVETAL"
BASE COUNT          235 a          323 c          295 g          280 t
ORIGIN      
        1 ggtgaatatc tgagacaaac tggctcagga aaagggaggg gtttacagtg ctgtctctac
       61 catctcttgg cgcaagttag ttttggcgag atgaatatac ttgagcgtcg tctccttctt
      121 cttatgcccc atcagctcct gcagggtggc caggctcata tgtttatccg ctttatgcgc
      181 gccgaaggtg tgccgcaggg tatgcacact cacctttttc cggatgccgg cctttttcac
      241 gtacttggca actatgtact taaccgttga gacgttcagc gatgtgccgt ttttggccag
      301 gaagaagatc tcatcatcct caatccactc ggtgttacgg taacgcaggt agttccgcag
      361 cgctttcacc gcctcatcca ccaagggaat ctgccggtct ttcttgccct tcccctgccg
      421 gacggtgagc atccggtgcg caaagtccac atcatcgacc cggaggttga ccagctcgct
      481 caaccggata ccggtctgca ggaaggtctg gatgatcgcg tagtcccgaa tgttgtccga
      541 ggcttcatat aacagcgcct tatactgctc tttatagaga atattcggct ctttctcctc
      601 gcgcctcgcc cccttcaccg tattggccgg gttgccggcg agaatcttat tctccgccat
      661 aaaggcgaag agtttgcgga tggcggcgag tttccggacg cgtgtgactc cggacatgcg
      721 ctgagcggag aggtactgca taaagccttc gatatccgcc cggctcatgc gggttggggt
      781 gtcccaatcc acccggttgt tctgcaccca tgccagaaat tgatgcagat catccccata
      841 cgcccgcagt gtctttggcg aatagttctg cccctgcagg gctcgcaaga acatctggag
      901 gctttgggtg gtggtcatgt ctaccataga tccatcatac ccctctcccc tcgcttcgcg
      961 aagccccaaa acctcctcag aaagcattgg ctataaacaa tcatttttcc attataagcc
     1021 aatgggtgac cggcgtcaac aagcgcgcgc ccggcggcgc actagctata atggcgggtt
     1081 atagccaatc caggtcaacc acgtgagagc agtgattcaa gggaaggtcc gag
//
LOCUS       DASQSL010000369         1112 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_44057, whole genome shotgun sequence.
ACCESSION   DASQSL010000369 DASQSL010000000
VERSION     DASQSL010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44057"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(22..>1112)
                     /locus_tag="VE844_03725"
     CDS             complement(22..>1112)
                     /locus_tag="VE844_03725"
                     /inference="COORDINATES: protein motif:HMM:NF025017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZC00487.1"
                     /translation="APFLADTRVRFLEIPPEQARRGKGHVLNAGYTAVTRSELAEPNP
                     ENVVVVVFDADTRVEPHFLRAVAPYFRDPTVAGVQSAVRMYNADQKLLTLWQHLEFAV
                     WGQVFCKAKDRLGSMTLGGNGQCVRFSALSSLGDEPWQTSSLTEDLDLSLRLLSKGWR
                     LRFCSSVAVWQEAVPRLGALVRQRSRWLQGHVICWQHLPALLRSRLPVFARLELLLFL
                     LLPIVFLPIGLTSIANWLHVLFSLFVGDWNYWNYDGDWDYWNTVSLLTWYVLGFGMAP
                     LVVVAWQQIDRPPLWRLLLHSHFFVLYSFVWFAASARVYLQVLLGRHAWFKTSRRERE
                     GAGAGGVKTKRAAAALRRRRHVDQEPIQ"
BASE COUNT          253 a          340 c          311 g          208 t
ORIGIN      
        1 caaagacgat gagtagcctc ctcattgtat tggctcctgg tcaacatgcc ggcgccgtct
       61 caaagcggca gctgcgcgct ttgtcttcac ccctcctgca cccgcaccct cccgttcgcg
      121 gcggctcgtc ttgaaccacg cgtgccgacc aagcaatact tgcaggtaga ccctcgcact
      181 cgctgcaaac cagacgaagg agtagagcac gaagaagtga ctgtgtaaaa gcaatcgcca
      241 taggggagga cgatcgattt gttgccaggc aaccaccact aatggcgcca ttccgaaacc
      301 gaggacgtac cacgtgagca agctcaccgt gttccaatag tcccagtctc cgtcgtagtt
      361 ccaataattc caatctccta cgaacagcga aaacaataca tgtagccagt tagcgatgct
      421 tgtcaggccg atgggaagga acactatggg gagcagcaag aacagtagga gctcgagtcg
      481 tgcgaaaact ggaagtcggc ttcgcagcag ggcgggcagg tgctgccagc agatcacgtg
      541 tccctgcagc cagcggctgc gctggcgtac gagcgccccc agtcttggca ccgcttcctg
      601 ccagactgcg accgaagaac agaagcgcag ccgccaccct ttgctgagta gccgtaagct
      661 aaggtcgagg tcctcggtca acgaagaagt ttgccaaggc tcgtcgccca agctgctcag
      721 agcactaaat cgcacgcact ggccgttacc tcccagggtc atgcttccta gacggtcctt
      781 ggctttgcag aagacctggc cccagaccgc gaactccaag tgctgccaca acgtcaagag
      841 cttttgatcg gcgttgtaca tgcggaccgc tgactggacc cctgcgaccg ttggatcgcg
      901 aaaatatggg gcgacagcgc gaagaaagtg cggctctacc ctagtgtcgg cgtcgaagac
      961 taccacgacc acattctcgg ggttaggctc cgcgagctcc gagcgcgtta ccgcggtgta
     1021 gccggcattc agaacatggc ctttgccgcg tcgcgcttgt tctggtggta tctccaagaa
     1081 cctgacccgc gtgtcggcca gaaacggtgc aa
//
LOCUS       DASQSL010000370         3331 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_44068, whole genome shotgun sequence.
ACCESSION   DASQSL010000370 DASQSL010000000
VERSION     DASQSL010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3331
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44068"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..215)
                     /locus_tag="VE844_03730"
     CDS             complement(<1..215)
                     /locus_tag="VE844_03730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00488.1"
                     /translation="MADAALRTPSTEGAEAAAAAAYAQEILDLLFGLLGDVIQLRQPE
                     IEPVLRGAIGIPQGRHDLLLKTLQAWG"
     gene            complement(223..1194)
                     /locus_tag="VE844_03735"
     CDS             complement(223..1194)
                     /locus_tag="VE844_03735"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015340841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008465 - glycerate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HZC00489.1"
                     /translation="MSKPKVVVTRRWPAEVEQTLEERYDTQLNLDNKPMSVAQLQEAL
                     CTADALLPTVSDQITAEVLSVDPLKTKILGNFGVGFNHIDLEAAKLRGLVVTNTPEVL
                     TDCTADLAMTLLFMTARRAGEGERHVRYRAWTGWRPTHMIATRLTGKVLGLIGFGRIA
                     RAVAHRAHFGFGMKILFQDPYPPAKQVAYALGAEQCATVEELLERSDFVSLHCPGGKE
                     TRHLINAERLARMKPHALLINTARGDVVDEEALVAALKNGTIAGAGLDVYETEPKVTE
                     ALLALENVVLLPHLGSATRETRVAMGMRVVENIEAFFAGKPPRDRVI"
     gene            complement(1196..2086)
                     /gene="sucD"
                     /locus_tag="VE844_03740"
     CDS             complement(1196..2086)
                     /gene="sucD"
                     /locus_tag="VE844_03740"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012709139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HZC00490.1"
                     /translation="MSILIDETIRVIVQGFTGQIGTFHAKEMMEYGTNIVGGVTPGKG
                     GTTHLGKPVFNTTKEAVEATGATASIIFVPAPFAADSIMEAADAGIHYCVAITDGIPA
                     QDMIRVKRYMRRYRAESRMILTGPNCAGTISPGKAMMGIMPGHIYRGGPVGVVGRSGT
                     LGYEAASQMKALGIGVSTSVGIGGDPINGSSFKDHLALFEEDPETRAVVMIGEIGGPQ
                     EAEAAHFAKDNMKKPVIGYIAGLTAPKGRRMGHAGAIISAFGESAAEKVEILQECGVT
                     VVPSPAEFGSTVAKVLAKVS"
     gene            complement(2109..3281)
                     /locus_tag="VE844_03745"
     CDS             complement(2109..3281)
                     /locus_tag="VE844_03745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020590765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate--CoA ligase subunit beta"
                     /protein_id="HZC00491.1"
                     /translation="MDIHEYQAKELLKGFGVSIPAGGLAYSPEQAVYRAKEIGGERWV
                     VKAQIHSGARGKAGGIKVCSTDNEIWDAAEHLLGRRLVTPQTGARGKVVNRLYIEAAT
                     GIGREIYLGMVLDRQSERVMVVASGEGGMEIEEIAVKRPESILRQSVEPAVGMLEFQA
                     RELAFGLRLPPGLLSQAVTTIMGAYRAFRDLDATMVEINPLVVTKDGRLLALDAKMAF
                     DDNALFRHPHISELRDKSQEDPREMAAADRGLSYVGLDGNIGCIINGAGLAMASMDMI
                     KHAGGEPANFLDIGGGASPERVAKAFNLVLSDEKVQTILVNIFAGINRCDWVAEGIVL
                     ALQKINLKIPLVVRLAGTNVEEGRKILKQSGLPIISAETLAEAAEKAVAAWKQAGK"
BASE COUNT          645 a         1093 c          911 g          682 t
ORIGIN      
        1 atcccccagg cctggagggt cttcaacaga agatcatggc ggccttgggg gatcccgatc
       61 gccccacgca gtaccggctc aatctcgggc tggcgcagtt ggatcacatc acctaagagc
      121 ccaaagagaa gatccaggat ctcctgggca tacgcggccg ctgctgctgc ttcggcccct
      181 tcggttgagg gagttctcag ggccgcatct gccatatttg ttttagatca cgcgatcgcg
      241 cggtggcttg cccgcaaaaa aggcctcgat attctccacg acccgcatcc ccatggccac
      301 tcgggtctcc cgggtagcac tgccgagatg cggcaacagc acgacgtttt ccagggccag
      361 gagtgcttcc gtgaccttgg gctcggtctc atagacatca agacccgccc cggcaatcgt
      421 gccgttcttc aaggcagcca ccagggcctc ttcgtccacc acatctccac gtgccgtgtt
      481 gatcagcaag gcatggggtt tcatccgggc cagccgctcg gcattgatga gatggcgcgt
      541 ctccttgccg cctgggcagt gcaacgacac aaagtcggag cgctcgagca gctcttcaac
      601 ggtagcgcat tgctccgcgc ccaaggcata ggcgacttgc ttagcgggcg gataggggtc
      661 ctggaacagg atcttcatgc caaaaccgaa atgggcccgg tgggccacgg cccgtgcgat
      721 ccgcccaaag ccgatgagac cgagcacttt accggtcagc ctggtggcga tcatgtgggt
      781 aggtcgccag ccggtccagg cccggtagcg cacatggcgc tcgccctcac cggcccggcg
      841 cgcagtcatg aacaacagag tcatggccag atcggcggtg caatcggtca atacctccgg
      901 ggtgttggtg actaccaggc cccgcaactt ggcggcttcg aggtcaatat gattgaagcc
      961 taccccaaag ttcccgagga tcttggtctt gagaggatct acgcttaaca cctccgccgt
     1021 gatctggtcc gataccgtcg gcagtaaagc atcggcggtg cagagcgcct cctgcagctg
     1081 cgccacactc atgggtttat tgtccagatt caactgcgta tcgtagcgtt cctcaagcgt
     1141 ttgctcaact tcggccggcc agcgccgggt aacgacaacc ttgggtttac tcatattagc
     1201 taaccttagc gaggaccttg gccacggttg agccgaactc tgcgggactc ggcaccacag
     1261 tgaccccgca ttcctgcagg atctccacct tttccgcagc actctcacca aaggccgaga
     1321 taatggcgcc cgcgtgcccc atacggcggc ccttgggcgc tgtgaggcct gcgatataac
     1381 cgatgacggg tttcttcata ttatctttgg caaaatgggc ggcttcagcc tcctgcggcc
     1441 cgccgatctc accgatcatc accactgccc tggtctccgg atcttcttca aacagcgcga
     1501 gatggtcctt aaacgaactg ccattgatcg gatcaccacc aatgccaacc gaggtcgaga
     1561 ccccaatgcc gagcgccttc atctgtgagg cggcctcata gccgagcgtt cccgatcggc
     1621 ccacgacacc gaccggcccc cccctataga tatggccggg catgatcccc atcatggctt
     1681 taccggggct gatggtgccc gcacaattgg gaccggtcag gatcatacgg ctctctgccc
     1741 ggtagcggcg catataacgc ttgacgcgga tcatgtcttg ggcgggaatg ccgtcggtaa
     1801 tagcgacaca ataatggatt ccagcatcag cggcctccat gatggagtcc gccgcaaacg
     1861 gggcgggcac gaagataatg ctcgcggtag cacccgtcgc ctcgaccgct tccttggttg
     1921 tattaaacac aggcttgcca agatgagtcg tgcccccctt acccggcgtc acgccgccga
     1981 cgatattggt gccatactcc atcatctctt tggcatggaa ggtgccaatc tggcccgtaa
     2041 acccctgtac gatcacccgg atcgtttcat ctattagaat gctcatactc tcaatccccc
     2101 gcaatacctt acttacccgc ctgcttccag gctgccaccg ccttctcggc cgcctcggcc
     2161 agtgtctccg cgctgatgat cggcaggccg ctctgtttga ggatcttgcg tccttcctcg
     2221 acattggtgc cggccagccg caccaccagg gggatcttca gattgatctt ctgtaacgcg
     2281 agcacaatcc cttcagccac ccaatcgcag cggttgatcc cggcgaagat attgaccagg
     2341 atggtctgga ccttctcgtc agagagcacc agattgaagg ccttggccac tcgctctgga
     2401 gaagcgccac cgccgatatc gaggaaattg gcgggttccc cgccggcatg cttgatcatg
     2461 tccatgctgg ccatggccag gcccgcaccg ttgatgatgc aaccgatatt gccgtcgagc
     2521 cccacatagc tcaagccccg atccgccgcc gccatctcgc gcggatcctc ttgggactta
     2581 tcgcgcaact ccgagatatg gggatgtcgg aacaacgcgt tgtcgtcgaa ggccatcttg
     2641 gcatccaggg ccaagagccg cccatccttg gtcacgacca aagggttgat ctcgaccatg
     2701 gtggcatcca gatcccggaa cgcccggtag gcgcccataa tggttgtgac cgcctggctg
     2761 agcagccccg gtggcagcct gagtccaaag gcgagctcgc gcgcctgaaa ttcgagcatc
     2821 ccgaccgccg gttccaccga ctggcgcagg atcgattcgg gccgcttgac cgcgatctct
     2881 tcgatctcca taccgccttc acctgaggct accaccatga cccgctcgga ttggcgatcc
     2941 agcaccatgc ccaagtagat ctcgcgcccg atcccggtcg ccgcctcgat atacagccgg
     3001 ttgaccacct tgccccgggc accggtctga ggggtcacga gcctgcgccc gagcagatgt
     3061 tcagccgcat cccagatctc gttgtcagtg gaacagacct tgatgcctcc ggccttgccc
     3121 cgtgcacccg aatggatctg ggccttgacc acccagcgct caccgccgat ctctttggcc
     3181 cgatagacgg cttgttccgg actgtaggcg agcccccccg cagggataga gacgccgaag
     3241 cctttaagta actctttcgc ttgatattca tggatatcca tacaggaccc ctgttgagtt
     3301 gtttattaac tgacctgact atcggccttt c
//
LOCUS       DASQSL010000371         1692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_98164, whole genome shotgun sequence.
ACCESSION   DASQSL010000371 DASQSL010000000
VERSION     DASQSL010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1692
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98164"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..140
                     /locus_tag="VE844_03750"
     CDS             <1..140
                     /locus_tag="VE844_03750"
                     /inference="COORDINATES: protein motif:HMM:NF013046.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acetoin utilization protein AcuC"
                     /protein_id="HZC00492.1"
                     /translation="AYAAERLCEIADRCCQGRILGLGGGGYNLRNIAVAWTAVVRAFL
                     R"
     gene            232..1638
                     /gene="gltX"
                     /locus_tag="VE844_03755"
     CDS             232..1638
                     /gene="gltX"
                     /locus_tag="VE844_03755"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008931741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009332 - glutamate-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HZC00493.1"
                     /translation="MTTVRTRFAPSPTGYLHIGGARTALFSWLYARKHKGVFVLRIED
                     TDRERSTEEAVRAILEGMAWLGLDHDEGPFFQTQRFDRYRVVIEQLLEQGHAYRCYCS
                     KERLEALRNEQMARKEKPRYDGRCRSLKAIPAQATEYVIRFRNPIDSTVVVEDLIHGR
                     VVFQNQELDDLIIARVDGMPTYNFTVVIDDMDMAITHVIRGNDHLNNTPRQINIFRAL
                     GVPTPAYAHVPMILGADGQRLSKRHGAVSVLQYRDQGYLPEALLNYLVRLGWSYGDQE
                     IFSREEMIERFDVSAINKSAAAFSPDKLLWLNQHYIKSTASAELAGRLPWYFAKLGID
                     TSMPPPLTEVVETLRERSKTLVEMAEKSRFFYQDFDHYDEAADKYLTRSVSEPLMVLR
                     HRLSNLAEWTAAAIHVQIREVAEQFHLKLSQIAQPLRIAMSGKAISPPIDITVQRVGR
                     ERSLSRLDRAIDYCLSQP"
BASE COUNT          381 a          430 c          470 g          411 t
ORIGIN      
        1 atgcctatgc cgccgagcgc ttatgcgaga ttgccgaccg atgttgccag ggccgtatct
       61 taggcttggg aggaggaggt tataatcttc gcaatatcgc cgtggcctgg acagcggtag
      121 tgagggcgtt tttacgctga gagtgctatc cctagtatgc gatgaattac tagggttcag
      181 ttgttacaat actcgtcccg agaatctctt ttttgagtct ccaaatcgcc tatgaccaca
      241 gttcgcactc ggtttgcacc cagtcctaca gggtatttgc atattggagg ggcgcggacc
      301 gctttattct cctggcttta tgcacgtaag cataaagggg tgtttgtact gcggatcgaa
      361 gataccgatc gggagcgttc taccgaagag gctgtccgtg ccatccttga aggtatggct
      421 tggttagggc tggatcatga tgaaggacct tttttccaga cccagcgttt tgaccgttat
      481 cgtgtggtca ttgaacaact gcttgagcag ggccatgcct accgctgtta ctgttcgaaa
      541 gaacggctcg aggctttgcg gaatgaacag atggcgcgga aagaaaagcc tcgttatgat
      601 ggccgctgcc gctcgctcaa ggcgatccct gcccaagcca cggaatacgt gatacggttc
      661 aggaatccaa ttgatagcac cgtggtcgta gaggatctca tccacgggcg ggtggtgttt
      721 cagaatcagg aactcgatga tctcattata gcccgcgtag atgggatgcc tacctataat
      781 ttcacggtgg tgatcgatga catggacatg gccatcaccc atgtgatccg cgggaatgac
      841 catctcaata atacgcctcg gcagatcaat atctttcgcg ccctgggcgt cccgacgcca
      901 gcctatgccc atgtccctat gatcctcggg gctgacggtc aacggctgtc caagcggcat
      961 ggcgccgtca gcgtgctgca ataccgcgac caggggtatt tgccagaagc cttgttgaat
     1021 tatctcgtca ggcttggatg gtcttacggc gatcaagaga tcttttcacg ggaggagatg
     1081 attgagcggt tcgatgtttc cgccatcaat aagtcagcag ccgcctttag ccctgacaag
     1141 ctcctctggc ttaatcagca ctatatcaag agcactgcaa gcgcagagct cgccgggcgc
     1201 ttgccgtggt attttgccaa gttaggcatc gatacttcaa tgcctccgcc cctcaccgaa
     1261 gtggtcgaga cactgcggga acgctcaaag acgctcgttg agatggccga gaaaagccgc
     1321 ttcttttacc aggacttcga ccactatgac gaagcggccg ataaatattt gacacggagt
     1381 gtatcggagc cgttgatggt gttgcggcat agattatcca atcttgccga atggacagcg
     1441 gctgcgattc atgtgcagat ccgggaagtc gccgagcagt ttcatcttaa actgagccag
     1501 atagcccaac ctttgcggat cgccatgagc ggcaaagcga tttcgcctcc tattgatatc
     1561 accgtgcagc gggtagggcg ggagagaagt ttaagcaggc tagaccgagc tatcgattat
     1621 tgcctatccc agccctgacg catgttccag gagcgtcatg gaaaacatac cgttagagat
     1681 gttacgcgta cc
//
LOCUS       DASQSL010000372         1381 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_84001, whole genome shotgun sequence.
ACCESSION   DASQSL010000372 DASQSL010000000
VERSION     DASQSL010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1381)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1381)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1381
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84001"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..200
                     /locus_tag="VE844_03760"
     CDS             <1..200
                     /locus_tag="VE844_03760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00494.1"
                     /translation="AGYTSLPCTPSVVAASGVTYYRCGSTWYTQAYAGGGVSYVTVAP
                     GRIPIFPVKGKAPVVTKLPPR"
     gene            242..1054
                     /locus_tag="VE844_03765"
     CDS             242..1054
                     /locus_tag="VE844_03765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00495.1"
                     /translation="MNNDRGKAECVENYTKRQEVYRRLQGLEQERRRVHTPEELEALE
                     REIRGYTDQLGALLVELHLQASLDCEEQQKKEEELIRSWPGRLKSDGYERVRIFTLGG
                     FWITVRARYYCRGCDRRSGKRYKGVYGGLVLLGIHEHCTPGLAATVSAWSALLSSFAE
                     VRQVLLEQGVKLDVKVVRKLAYRYAERARVLQQAGQIALAEGDNVQGRRVVVSADGGR
                     LRLRENKRGAKTKKGRTRDRGAWREPKLLIIYVVNARGKLETSFAPLIDGHL"
     gene            1067..>1381
                     /locus_tag="VE844_03770"
     CDS             1067..>1381
                     /locus_tag="VE844_03770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ISLre2 family transposase"
                     /protein_id="HZC00496.1"
                     /translation="MFHLLEDSLHSLAIDRADHVLFVADGAHWLWNRIPKLIGVLGLE
                     PQRVHLLIDFYHATEHLGKLAALRKNWSAQQRHAWIRTQRRRLWAGHVAKVVEAVQVL
                     CHD"
BASE COUNT          288 a          318 c          476 g          299 t
ORIGIN      
        1 ccgcgggtta cacgagcctg ccatgcaccc ccagcgtggt cgctgccagc ggcgtgacct
       61 attaccggtg tggttcaacc tggtacaccc aggcttatgc aggcggtggc gtctcctatg
      121 tgacagtggc tccagggcgc attcccattt tcccggttaa agggaaagca cctgttgtga
      181 caaaactccc ccctcgttga tactccctct gtgtcgaaag aaatctaatg gaatagggag
      241 catgaacaac gatcggggga aagcagagtg tgttgagaat tacaccaaaa gacaagaggt
      301 gtataggcgt ttgcaggggt tggagcagga gcggcgtcga gtgcatactc ctgaggaatt
      361 ggaggcatta gagcgggaga ttcgtgggta tacggatcag ttaggtgcgt tgctggtgga
      421 gctgcacctg caagccagct tggattgtga agagcagcag aagaaggaag aggaactgat
      481 acgctcctgg cctggacggt tgaaaagcga tggctacgag cgggtacgga tttttacact
      541 gggaggtttt tggatcacgg tccgggcccg ttactactgt cgtgggtgtg atcgtcggag
      601 tgggaagcgg tataaagggg tgtatggcgg tctggtgctg ttagggattc atgagcattg
      661 cacaccggga ttagccgcga ccgtgagtgc gtggtcggcg ttgctgagtt cgtttgcgga
      721 agtgcggcag gtgttattgg agcagggggt aaaactggat gtcaaggtgg tgcggaaatt
      781 ggcctaccgc tatgcggagc gggcgcgcgt gttgcagcag gcggggcaaa ttgcgttggc
      841 tgagggagat aacgtacagg ggcgtcgggt ggtggtgagt gcggatgggg gtcgcctgcg
      901 gttacgagag aacaagcggg gcgccaagac caagaagggg cggacccggg accggggagc
      961 ttggcgtgaa ccgaagctct tgatcatcta tgtggtcaat gcgcgcggga aactggaaac
     1021 gagttttgcc ccgttaatcg atggccatct ctaagggccg gaggcgttgt tccacctcct
     1081 cgaggactct ttgcactccc ttgccattga ccgggctgac cacgtcctgt tcgtggctga
     1141 tggcgcccac tggctatgga atagaatccc gaagttaata ggggtgctcg gtttggagcc
     1201 ccagcgcgtc catctcttga ttgacttcta tcatgccacg gagcatttgg ggaaactggc
     1261 cgccttacgt aaaaactggt cagcccagca acgccacgct tggatccgaa cccaacgccg
     1321 tcggttgtgg gcggggcacg tcgctaaggt ggtggaggcc gtccaagtgt tatgtcacga
     1381 c
//
LOCUS       DASQSL010000373         1757 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_3193, whole genome shotgun sequence.
ACCESSION   DASQSL010000373 DASQSL010000000
VERSION     DASQSL010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1757)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1757)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1757
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3193"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            114..959
                     /locus_tag="VE844_03775"
     CDS             114..959
                     /locus_tag="VE844_03775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00497.1"
                     /translation="MSQFSKMRHSRDQWKDKAKQRGKRERYERRERARMKAERDQLTH
                     ALKASETRVHELEAQLQGLALRPKVDVVHLALKLFLEARISFRAVSRVLALLAWALGI
                     QKAPCPQTIINWVIRLTIVRIDAARTLRGLPLDPAPFTNGLIWMIDISIGLGSGKILA
                     VLALDAHHHQLAAGAPALRHVYCLGVAVADAWTGETIAELLKRLIAQMGRPAAYLKDS
                     GSDLHKAAALLEDDGLGSPCLDDISHAAAGMLKRTYQHHPTFERFVSVCGRVSGKLKQ
                     TLLAC"
     gene            972..>1757
                     /locus_tag="VE844_03780"
     CDS             972..>1757
                     /locus_tag="VE844_03780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00498.1"
                     /translation="MRTKARFMNVHRLVTWADRVLGLSPPGGARRGSMLAKLRDALGD
                     LPECRTLIKRFRGDASALLACQAILKTHGLGVATFAQCEPLLDAMPTAAVRQEFRAYL
                     HYQLKTAKTLGLDQVGVPISSDTIESLFGVGKSHGVGETPDAARIALRLPAFCGLPTR
                     QEAEQVLEVSVARQHELTAAFTSLIQQRREVLSHPERLESLVREPDRPYVELIPSPKK
                     RSNHEVSINIKTIYGNDNGTLVAPSDESLAIENTAPPHFEQTVV"
BASE COUNT          340 a          551 c          519 g          347 t
ORIGIN      
        1 aaggtgttga ataaaagtcg tttgaggcta cgtcagtgcc attccatcct cggtccaacc
       61 tgaacttgac gccgtggcct caggtcatcg caggggttcc tgagggagtt atcatgagcc
      121 aattttccaa gatgagacac agccgggatc agtggaaaga caaagctaag cagcgcggca
      181 agagggagcg ctacgagcga cgagagaggg ctcggatgaa ggccgagcgc gatcagctta
      241 cccacgccct caaggcgtcc gagacccgcg tgcacgaact cgaggcgcag ctccaaggac
      301 tcgccctccg acccaaagtc gacgtggtcc acttggccct gaaactgttt ttggaggccc
      361 gcatcagctt tcgcgctgtc tctcgcgtcc tggccctgct cgcttgggct ctgggtatcc
      421 agaaagcacc ctgtccccaa accatcatca attgggtgat ccgactcacc atcgtgcgaa
      481 tcgatgcggc ccggacgttg aggggtttgc ccctggaccc tgcccccttt accaacggcc
      541 tgatctggat gatcgatatc agcatcggcc tgggctcggg caagatactc gccgtgttgg
      601 ccttggatgc ccatcatcac caactggcgg ccggcgctcc cgctctgcgt catgtctact
      661 gtcttggcgt ggccgtggcc gatgcctgga cgggggaaac gattgccgag ttgctcaaac
      721 ggctcatcgc ccagatgggt cgccccgctg cctatctcaa agacagtggc agtgatctgc
      781 ataaagcggc cgccttgctg gaggacgacg ggctgggcag tccgtgtctg gacgatatct
      841 cccatgccgc tgccggtatg ctcaagcgaa cctaccaaca ccatccgacc ttcgagcgct
      901 ttgtgtcggt ctgtgggcgg gtctcgggca agctcaagca aacgctcctg gcgtgctgag
      961 cgcctcccac tgtgcggacc aaggcccgtt tcatgaatgt gcatcgcttg gtcacctggg
     1021 ccgaccgcgt cctggggctg tcgccaccgg gcggggccag gcgcggctcg atgttggcca
     1081 aactccgcga cgccctgggt gacttgcccg agtgtcgaac gctcatcaag cggtttcgag
     1141 gcgatgcgag cgcgttgctg gcctgccagg cgattctcaa aactcacggc cttggggtgg
     1201 ccacgtttgc ccagtgcgaa ccgctccttg acgccatgcc taccgccgcc gtccgtcagg
     1261 agtttcgtgc ctatctgcac taccagctca agacggccaa gaccttaggg ctcgatcaag
     1321 tgggcgtgcc gatcagctcc gataccatcg aatcgctgtt cggcgtgggc aagagccacg
     1381 gggtcggcga gaccccggat gcagctcgca tcgcccttcg cttgccggcg ttttgcggcc
     1441 tgcccactcg gcaggaggcc gagcaagttc tagaggtcag tgtggcccgg caacacgagt
     1501 tgacggcagc gttcacctcc ctcatccagc agcgacgcga ggtgctctct cacccggagc
     1561 gccttgagag tttggtccgg gagcccgatc ggccttatgt ggagctcatc ccgagtccca
     1621 aaaagcgttc aaaccatgag gtaagcatca atatcaaaac aatttatgga aatgacaatg
     1681 ggactctagt cgcgccctca gatgagtccc tggccattga aaatacagca ccaccccact
     1741 tcgaacagac cgttgta
//
LOCUS       DASQSL010000374         1051 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_98219, whole genome shotgun sequence.
ACCESSION   DASQSL010000374 DASQSL010000000
VERSION     DASQSL010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98219"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            293..721
                     /locus_tag="VE844_03785"
     CDS             293..721
                     /locus_tag="VE844_03785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011565537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HZC00499.1"
                     /translation="MSIFPTKILVATDGSREAQLAATTAAELANSTNSELHVVHVGEL
                     RPTFLAQTEAEPAELQREAQRLLDEQLSRVEEAGGTVKEAHLRQGQADEEIVDLAESL
                     GIGLIVMGSRGRGRIRRALMGSVSDSVIRHAHCPVTIVRE"
BASE COUNT          263 a          288 c          303 g          197 t
ORIGIN      
        1 tctccagcac actataggcg cgacgatgaa cgggcgatgc tttcatcgcc cccatccacc
       61 tcggtgcatc tttattcacc acaagatgta gtgttgacta gaacgcgtcg ggccgaggtg
      121 caatggcaaa acccggcccg ataggcgcga gctatacagg atgctgcatc cgaccttcgc
      181 agaatctacc ttccacgcat tcgggtgaat agtctccgga cgcaagcgct gaacctcagc
      241 tcgtggcatc atggtgccca aggaaagggc ctagagcaag gaggttagcc cagtgagtat
      301 cttccccaca aagattcttg tggccaccga cggctccagg gaggcacagt tggccgcaac
      361 caccgctgcc gagctagcca acagcaccaa ctctgagcta cacgttgttc acgtcggaga
      421 gttaaggccg acctttttgg ctcaaacgga agcggaaccc gctgaactcc aacgcgaggc
      481 acagcggctg cttgatgaac agctaagtag agtcgaggag gcaggaggca ccgtcaagga
      541 ggcgcactta aggcaaggac aggcagacga agagatcgtc gacttggccg aaagcttagg
      601 cattgggttg atagtaatgg gcagcagggg tcgtgggagg ataaggaggg ctctaatggg
      661 cagtgtatct gactcggtga tccggcacgc ccactgcccg gtcacaatag tcagggagta
      721 agagagcgca acttccgata actgtgtcaa agccaacttc ttagaattca ccttctaggc
      781 actccggtga atagacttca gggcggtgcc ccgccgtaag attcatcgcc gtttcatcgc
      841 tatctgcttt cattcgggat aaggactggg atggtccgac gaaacgacag caaggaggtt
      901 cgatggctca acagtcgagc gcggggccga atcatctact catcatcacc gacgaccagc
      961 cccactacat gcagaacgcg aatttcacgc cgcacatagc agcgagaatt gcgaactacg
     1021 gcctgaagtg ggtccagggt tcgtgggcaa a
//
LOCUS       DASQSL010000375         1039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_17174, whole genome shotgun sequence.
ACCESSION   DASQSL010000375 DASQSL010000000
VERSION     DASQSL010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17174"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            292..651
                     /locus_tag="VE844_03790"
     CDS             292..651
                     /locus_tag="VE844_03790"
                     /inference="COORDINATES: protein motif:HMM:NF023363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3455 domain-containing protein"
                     /protein_id="HZC00500.1"
                     /translation="MKNDKAQTTQTTRRLVLAVAFTVSLLQPVYAADIVPPPVPPNLQ
                     VPAGNKAFREGHAVGTQNYICLPSDSSVAWTFFGPQATLFNDKDRQIITHFLSPNPDE
                     SGMARATWQHSRDTSTV"
     gene            655..912
                     /locus_tag="VE844_03795"
     CDS             655..912
                     /locus_tag="VE844_03795"
                     /inference="COORDINATES: protein motif:HMM:NF023363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3455 domain-containing protein"
                     /protein_id="HZC00501.1"
                     /translation="MAIASSSDLNFFESGAIPWLLLQVVGAEPGPTGGDKLTGTTFIQ
                     RLNTSGGIAPSTGCAQSTDVGKKAFVPYTADYFFYKAAQSE"
BASE COUNT          227 a          331 c          278 g          203 t
ORIGIN      
        1 cgctcaagga actcgccaac aatgccttac gtcgcgcatt ggtaactatt tttagattat
       61 ttgatgacac caagggtgtt aaaagtcctc cgcaacttcc accttgacag tgtttttcat
      121 atgggacagg actgagaaca gatatacaga tctatacagg acggaaacgg gcaccgtgtc
      181 gtcaagtgat cgctcatccg tttgcagcgg gtgggccgct gaggacgatt gctgaaggtt
      241 ctgtacgcgt cagccctata acccgcgccc caggcgtgaa aggagaatct catgaagaac
      301 gacaaggccc aaaccactca gaccacgcgt cgcctcgtgc tcgctgtggc attcacagtc
      361 tcgctgctgc aaccggtcta cgccgccgac atcgtgccgc cccccgtacc ccccaacctg
      421 caggtgccgg cggggaacaa ggcgttccgc gagggacacg ccgtcggcac ccagaactac
      481 atctgcctgc cttcagactc cagcgtcgcc tggacattct tcgggccgca ggcgaccttg
      541 ttcaacgaca aggataggca aatcatcacc cacttcctca gtcccaaccc ggatgagagc
      601 ggcatggccc gtgccacctg gcagcactcc cgggacacca gcaccgtctg agccatggcg
      661 atcgcttcct cctccgacct caactttttt gagtcgggtg cgattccctg gctcctgctc
      721 caggtcgttg gcgctgaacc cgggcccacc ggcggcgaca agctgacggg gaccactttc
      781 atccagcggc tgaacacctc gggcgggatc gcgccctcga ctggatgtgc ccagtcaaca
      841 gacgttggta agaaggcatt cgtgccttac acggccgact atttcttcta caaagccgcc
      901 caaagcgagt aggacgacga agttgagctg gggttgagcg aaattgtcgg ccgcacccac
      961 gctgccccgc gtataggaag catagctcgg ggtcacccat tagccggccc cgtgtcaata
     1021 ggcaaaatta cttttagca
//
LOCUS       DASQSL010000376         1424 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_29049, whole genome shotgun sequence.
ACCESSION   DASQSL010000376 DASQSL010000000
VERSION     DASQSL010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1424)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1424)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1424
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29049"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            405..>1424
                     /locus_tag="VE844_03800"
     CDS             405..>1424
                     /locus_tag="VE844_03800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014253206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00502.1"
                     /translation="MTRLPMQAFAAFIGLDWADATHAVCLQAAGSDTRESSMLEHTPE
                     AIDAWARALRHRFGGQPIAVCLELTTGPIVSALRTHDFLVLFPVNALTVAKYRQAFTP
                     SRAKDDPSDAELQLELLLKHRDKLQVLTPQGATMRTLDQLVGFRRRVVEDKVRLTNRL
                     TSALKNYFPQVLSWFSDKDTTIFCDFLSQWPTFKAVHQARRATLERFFRQHHVQTRVI
                     APRIQAIKSASPLTTDESVITPHVCLVRALVAQLRATLQAIEDFDRAIAQLAPTHPDF
                     ALFQALPGAGPVFAPRLLVAFGEQRDRYASASELQQYAGIAPATERSGNTCWVHWRLQ
                     CPKFLR"
BASE COUNT          287 a          477 c          371 g          289 t
ORIGIN      
        1 gagaaagctt atcactgtag gcgaaaaacc caattaatcc agcgctaaaa gacattgctg
       61 acaaagggat attgggggtg tgagcatacg tcatatacac agtagcaaac cgggccaaca
      121 catcctttat gccagtgcgg atataggtag accgtcctgc tttcggtgat actgaacaca
      181 gctggtaggt agctaccagt gaaagcagga acatgtgccc gcggattacg aatcaccagt
      241 gcgtagcatt cgatgctcat taactcaact tcgaatccgc gggtgcgctg gcgttcgtga
      301 acgaatgctc agggcctgcc gcaccagcgg ctctctatat tgccttcgca gaacgtcagc
      361 tcgccatctc gcttcccaca aggcttgtct cactggaggt gaccatgacg cgtctaccta
      421 tgcaggcatt cgctgcgttt atcggcctcg actgggcgga tgccacacac gcggtctgtc
      481 tgcaagcggc tggctccgac acccgagaat ccagtatgtt ggaacacacg cccgaggcga
      541 tcgatgcctg ggcgcgtgcg ctccgtcacc gcttcggcgg tcagccgatc gccgtctgcc
      601 tggagttgac cacaggtccc attgtttctg ctctacgtac ccatgacttt ttggtgctct
      661 tccccgtcaa cgcgctcacg gtggccaaat accgtcaagc cttcacgccc agtcgagcga
      721 aggatgaccc ctcggatgcg gaactccagc tcgagctcct gctcaaacac cgtgataaac
      781 tccaggtgct caccccgcaa ggtgccacga tgcgcacgct ggaccaactc gtgggattcc
      841 gccggcgcgt ggtggaagac aaggtccgtc tgaccaaccg cctcacgagc gccctaaaga
      901 actatttccc gcaggtcttg tcatggttct ccgacaaaga cacgaccatc ttctgcgact
      961 tcctcagtca atggccgacc ttcaaggcgg tccatcaggc ccgccgcgcc accctggagc
     1021 gcttctttcg ccaacaccat gtgcagactc gcgtcatcgc cccacgcatc caggcgatca
     1081 aaagcgccag cccgctcacg acagatgaga gcgtcatcac ccctcacgtc tgccttgtcc
     1141 gggcccttgt cgcccagctt cgtgccacct tgcaggcgat tgaggacttc gaccgcgcca
     1201 ttgcgcaact ggccccgacc catcccgact ttgccctctt tcaggcgctc ccaggcgctg
     1261 gtcccgtctt cgccccgcgt ctcctcgtgg cgtttggcga acaacgcgac cgctatgcct
     1321 ccgcctctga gctccaacag tatgcgggca ttgcgccggc caccgaacgc agcgggaaca
     1381 cgtgttgggt ccactggcgg ctccaatgcc cgaagttcct ccga
//
LOCUS       DASQSL010000377         1074 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_17189, whole genome shotgun sequence.
ACCESSION   DASQSL010000377 DASQSL010000000
VERSION     DASQSL010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17189"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..185
                     /locus_tag="VE844_03805"
     CDS             <1..185
                     /locus_tag="VE844_03805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00503.1"
                     /translation="LKLAAGCSALGYFDRVYGVGILSILLSSCCSVFRAFGLWSCRGG
                     HGDVPLLFCARESAGV"
     gene            218..>1074
                     /locus_tag="VE844_03810"
     rRNA            218..>1074
                     /locus_tag="VE844_03810"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          260 a          268 c          353 g          193 t
ORIGIN      
        1 agctcaagct cgccgccggg tgttccgctc taggatattt cgaccgagtc tacggcgttg
       61 ggatcctttc catccttttg agtagctgct gttcagtttt cagggccttc gggctctgga
      121 gctgccgggg tggccacggc gacgtgccac tccttttttg cgcccgcgag agcgcaggcg
      181 tctgatcttt gaaaactgca tagcgtgaaa tccaaaccat taagatagta agggcgtatg
      241 gtggatgcct tggcaccgaa agccgatgaa ggacgtggca agctgcgata agccgtgtgg
      301 agccgcaagc gggctatgaa gcacggatct ccgaatgggg aaacccggcg cgggtaatgc
      361 cgtgtcaccc ctgcctgaac acatagggca ggaggaggga acccggggaa atgatacatc
      421 tgagtacccg gaggaaagga aagaaagtct cgattccctt agtagtggcg agcgaaaggg
      481 gaatagccca aaccgaatac gtgaaagcct gtgggcgttg cgtattcggg gttgtagggc
      541 cgacatggct gtcccacagg gcggccgagg gagttacaaa tcgcgcgggt agtcgaacag
      601 gtctggaaag tccggccgta gcgggtaaga gccccgtaga cgaaactcga gcgactccct
      661 gttcggttcc tgagtagatc cggacacgtg aaacccggat cgaacccgcg gggaccaccc
      721 cgcaaggcta agtactaacg gtgaccgata gtgaaccagt accgtgaggg aaaggtgaaa
      781 agtaccccgc aaggggagtg aaatagtacc tgaaaccata cgcttacaag cggtcggagc
      841 ggccctttta gggctgtgac ggcgtacttt ttgcataacg ggccagcgag ttgctggtgc
      901 ctggcgaggt taagcacata catagcgagc cgaagcgaaa gcgagtctga acagggcgac
      961 aataataagt caggtgccgc agacccgaaa ccgggtgagc tatccatggc caggctgaag
     1021 cgggggtaag accccgtgga gggccgaacc gacctgggtt gaaaaccggg cgga
//
LOCUS       DASQSL010000378         1101 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_154118, whole genome shotgun sequence.
ACCESSION   DASQSL010000378 DASQSL010000000
VERSION     DASQSL010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154118"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..235
                     /locus_tag="VE844_03815"
     CDS             <1..235
                     /locus_tag="VE844_03815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00504.1"
                     /translation="RERGYLILDDTVIPKPFATAMESLAWVYSSRERKPVYGFARVWC
                     INPPGDLDTPRAERHALTFITPLTNGKEHDGAP"
     gene            219..>1101
                     /locus_tag="VE844_03820"
     CDS             219..>1101
                     /locus_tag="VE844_03820"
                     /inference="COORDINATES: protein motif:HMM:NF033579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZC00505.1"
                     /translation="MTEPHKRPTRHPTYKTAYRVKNWREYDQSLRNRGDITLWISQEA
                     IDTWTPPQTGQKGAPLVYSDLAIETALSLRLLFDLPLRQTEGFLRSILQLMSLDLPCP
                     DHTTLSRRNATVAVRQQLDRVSPRPLSLIVDSSGLKVCGQGEWHSQKHGEKKCKRWKK
                     LHIGVDDDGRIIASTVTESNEPDPSQVPSLLDQVDRRLYRFIGDGIFDQEPVYAAVER
                     HSSGARVIIPPRKDAVLSPTASTAPTQRDQHLLAIGRVGRFQWKRTSGYYAQSHAENA
                     FSRYKRTFGGVLRARRDE"
BASE COUNT          252 a          319 c          312 g          218 t
ORIGIN      
        1 cagagagcga ggctatctca ttctggatga cacggtcatt cccaaaccct ttgcgacggc
       61 catggagagt ctggcctggg tgtactccag ccgggagcgc aagcctgtct atggcttcgc
      121 gcgggtttgg tgcataaatc ctccaggtga tcttgacacc cccagagccg agcgtcatgc
      181 tttgacattc atcaccccac taaccaatgg taaagagcat gacggagccc cataaacgac
      241 ccacccgaca tcccacatat aaaaccgcct atcgtgtcaa gaattggcgc gagtatgacc
      301 agtcgttgcg taaccgaggc gatatcaccc tctggatcag ccaggaggcc atcgatacat
      361 ggacacctcc gcagaccggt cagaagggtg ctccactagt gtactcggac ctggccatcg
      421 agacggccct atcactacgg ttgctctttg acctgcccct gcgccaaacc gaagggtttt
      481 tgcgttcgat cttgcagctg atgagcttgg acctgccgtg ccccgatcac accacgttgt
      541 cccgacgcaa tgccaccgta gcggtccgac agcagctcga tcgggtgtca ccgagaccgc
      601 tatccctgat cgtggacagt agcggcttga aggtctgtgg tcaaggggaa tggcatagcc
      661 agaaacacgg ggagaagaaa tgcaagcgct ggaagaagct gcacattggc gtggatgacg
      721 acggtcgcat tatcgcctcc accgtgaccg aaagcaacga gccagaccct tcgcaagtgc
      781 cgtcgctttt agatcaagta gatcgccgtc tctatcgctt catcggagac ggtatcttcg
      841 accaagaacc ggtctacgcc gcagtagaac gccattcgtc gggagcccgg gtgatcatcc
      901 cgcctcgcaa ggatgcggtg ttgagcccca cggcatcaac cgcaccgacc caacgtgatc
      961 agcatttgtt ggcgatcggg agggtcggtc gatttcagtg gaaacggacg tcgggttatt
     1021 acgcgcagag tcacgctgaa aatgcctttt cgaggtacaa aaggacgttc ggaggcgttt
     1081 tacgggcaag gcgggacgag g
//
LOCUS       DASQSL010000379         1454 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_140189, whole genome shotgun sequence.
ACCESSION   DASQSL010000379 DASQSL010000000
VERSION     DASQSL010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1454)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1454)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1454
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140189"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(184..534)
                     /locus_tag="VE844_03825"
     CDS             complement(184..534)
                     /locus_tag="VE844_03825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00506.1"
                     /translation="MTRSGYCAPVKQAMAMRSSGHLLRRAGRKLPRGTIWVLVAYAAL
                     AAILTLVVGLPLPWGLLGAGGLLALVWVNTHPDDRHSGGAGAQYHGGGGVADFGGGVG
                     DGGGGGDGGGGGGG"
BASE COUNT          341 a          445 c          404 g          264 t
ORIGIN      
        1 tatccgctcc ttgtcacgtc acggaagtaa ggtatcccct cgcgacgagg agcgcatcac
       61 tcaaatgagt gatattccta gtactctagg ccaacttccg agaatcccca aaaggcgaag
      121 ttcgcagaat tcctattcca cgcactccgc tgaataaagg taacgagtag ggctaaggct
      181 actctaccct cccccaccgc ccccgccgtc tcctcctccg cccccgtctc ctacgccgcc
      241 gccgaagtct gctacgccgc caccgccgtg gtattgcgct ccggcaccac cggagtggcg
      301 atcgtcgggg tgcgtgttaa cccacacgag cgccaacagg ccgccggcgc cgaggagccc
      361 ccacggcagc ggtaacccca ccacgagggt caagatggcc gcgagcgccg cgtaggccac
      421 gagcacccag atcgtgcccc tcgggagctt cctgcccgca cgcctcagaa gatgcccgga
      481 tgagcgcatt gccatcgcct gcttcaccgg agcgcagtat ccgctccttg tcacgtcacg
      541 gaagtaaggt atcccctcgc gacgaggagc gcatcactca aatgcagtat ttattgctaa
      601 gttatatggc ctaattctcg agccgattaa ggagaacttc ttagaatgcc gaacaggcga
      661 acttcgcaga acgccgtacc tgcgaagttc atccgcgaag cccatagccc cagtccacac
      721 ggcccaggac cgcccgacac aaccctcgac cataagtaga gctaaaagct gaagactttt
      781 ccacgctgcc cccgtacaat agaaaaagga gcgtctttta caagacgccc ccctcaacgc
      841 cagcgttctc atttcccccc tccgggaacg ctggttgtct ttgacgctaa cacctttgca
      901 cgtcgaatac caggctcagc ctcacggcag taggccgata aacagagcgc atccccatag
      961 gcatccctaa aagcctcaac gaactgtttt tgcaactttt ttagctaaag gcagagaaaa
     1021 cctcttccac ctcgctggtg tgtaagcttg gctacggccc aggaccggcc cgatgcgaat
     1081 agaaaagccg gtgcgctgat cctcggaggg ggggatgagg gacgcccagc ttaacgcgaa
     1141 acgctaattg tagtgccgag gaggaccagg gtatatagcg caaatgaatg attttcatag
     1201 agggtgttgt gctttgataa gagcctagag gggaaatgat aggagtagga ggggaatggg
     1261 gggaccctcc ggtggcgtcc cccattgtgc gaaggtcagg gctggcattg cggcatggga
     1321 gcggggcaga gcgaagggcc ggaggaaagt agactaagga aactccgacc ccatgataga
     1381 agccgatgcg ccgagcacgg ggaggatgtg atagtgcttt gcagagcgtg cccgcccacc
     1441 gggggtagtc atgg
//
LOCUS       DASQSL010000380         1227 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_98252, whole genome shotgun sequence.
ACCESSION   DASQSL010000380 DASQSL010000000
VERSION     DASQSL010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98252"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1227)
                     /locus_tag="VE844_03830"
     CDS             complement(<1..>1227)
                     /locus_tag="VE844_03830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00507.1"
                     /translation="FSDPKVAHALQQFKSPHITAPTVADPLRLFVSGVIEGLRRTSST
                     IPFDLTTLMVFGCPSAWSDEQRLGYGRLLAQQVSGMQSMLVPESRAAFITMKEERQLT
                     QAEIREPILIVDLGSSTTDFTFVLNLDPAELSIGKHYPLGAACIEQQLLELALCTCPK
                     REAIQAWWQQSPSEYHRTVWKFREAKEDFFRSEDTWRQGRPMEVAVSYWIGDTERIKL
                     EINLTAAHFDAAIDTPLRALGERPIAWRDRFRADLEAASQRIHETIGAPPRIVVLTGG
                     AARMRFIEEIANEVFPEPTVVRQAPEPEHAISIGLAHAGSIRYRTQAFLKEIGEMINS
                     GQVQDVICSRMSSFAEAIAEVVTTDATQRFILPEFLEWRSSGEGKLKDIAERISARIE
                     AWQRSQDGQQRILRAL"
BASE COUNT          253 a          351 c          374 g          249 t
ORIGIN      
        1 ataagtgctc tgaggatccg ctgttgtcca tcttgcgatc gctgccaggc ctctatccga
       61 gcggagatgc gctcggcaat gtccttaagc ttaccctcgc cggaactgcg ccactccaaa
      121 aattccggca ggataaaccg ttgagtagca tccgtcgtca ccacctcagc gatagcctcg
      181 gcaaacgaac tcatgcggct acagatcacg tcttggacct gtccagagtt gatcatctcg
      241 ccgatctctt taaggaaggc ttgcgtgcgg tagcggatag atccggcatg ggccaggccg
      301 atggagatgg cgtgctcagg ttcaggggcc tgccgcacta ccgtgggttc agggaatacc
      361 tcattggcga tctcctcgat aaagcgcatc cgcgcggcac caccggtgag cactacaatt
      421 ctagggggtg cgccaatggt ttcatggatc cgctgggagg ccgcctcgag gtcagctcgg
      481 aatcggtcac gccaggcgat cggacgctca ccgagcgcgc gtaagggggt gtcgatagcg
      541 gcatcgaaat gtgcggcggt gagattgatc tcgagcttga tccgctcggt atcgccgatc
      601 caatagctca ccgccacctc catcggacgg ccctgacgcc acgtgtcctc ggagcgaaaa
      661 aaatcttctt ttgcctcccg gaatttccag acagtccggt ggtactcgct cggggactgc
      721 tgccaccaag cctggatcgc ttcgcgcttg gggcaggtgc agagcgcaag ctcaagcaat
      781 tgctgctcaa tgcaggcggc gcccagcgga tagtgcttgc caatcgacag ctcggcggga
      841 tcgaggttga gtacgaaggt aaagtcggtg gtggaggatc cgagatccac gatcagaatc
      901 ggctcgcgga tctccgcttg ggtcaattgt ctctcctcct tcatagtgat gaaggcggcc
      961 cgagactccg ggacgagcat agactgcatc cctgacactt gctgagcgag cagcctgcca
     1021 tagccaagcc gctgttcgtc cgaccatgcc gatggacacc cgaacaccat gagcgtggtg
     1081 agatcaaagg ggatggtgct gctagtgcgg cgcaggccct ctattacccc ggaaacgaat
     1141 aaacgcaatg gatctgcgac ggtcggagcg gtgatatggg ggcttttgaa ttgctgcagg
     1201 gcgtgcgcta ccttgggatc actgaag
//
LOCUS       DASQSL010000381         1008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_140206, whole genome shotgun sequence.
ACCESSION   DASQSL010000381 DASQSL010000000
VERSION     DASQSL010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140206"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            117..>1008
                     /locus_tag="VE844_03835"
     CDS             117..>1008
                     /locus_tag="VE844_03835"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HZC00508.1"
                     /translation="MRKLILTALLFVLCTACTTPAGRKEFLDAPTGYRPPLDTDEAGV
                     WMRMDSLEKSLKSSGLLVRDPELNNYIHGIVCRVAGSHCADIRVYVVRIPEFNASMAP
                     NGVMQVWTGLLLRAENEAQVAYIIGHELGHYLRRHSLQMWRDLRQKSSLFAYFNLLTL
                     VVGVPGYVHDITQLATLGSIFKFSRDSEREADQLGFELTTVAGYDSREAGKLWEALLK
                     ERDAAKDPTPWVFFSTHPPTKERIATLNRLADEFADKHKPEITGKEPYLATVGPWHGM
                     LLRDELQQRQFARSQVLLDRL"
BASE COUNT          215 a          272 c          287 g          234 t
ORIGIN      
        1 tcatgacggc gacattgaat ggtttaaccg tctggtcagc tatactggag atcttcgcag
       61 tgctgaaccc gcccgcaaaa ctatcaagaa cctgctggtt gacctgcccc tgtaatatgc
      121 gtaagttgat cctgacagcg ctgttatttg tgttatgcac agcttgcaca actccagccg
      181 gacgcaagga gtttctggat gccccaaccg gctatcgccc gcccctggat accgatgagg
      241 cgggagtgtg gatgcgcatg gatagtctcg aaaagagcct caagagctca ggtctgctgg
      301 tgcgggatcc ggagcttaac aattatatcc acggtattgt gtgtcgcgtc gccgggtcgc
      361 attgtgccga cattcgcgtt tatgtagtcc gcatccccga gttcaacgcc tccatggcgc
      421 ctaatggagt catgcaggta tggactggat tactcttgcg tgcagagaac gaagcgcagg
      481 tggcctacat cataggccat gagctcggcc actatctgcg cagacactct ctgcagatgt
      541 ggcgggacct gcggcaaaaa tcatccttat ttgcctattt taatctgctg accctggtgg
      601 tcggcgttcc tgggtacgtg cacgatatca cgcaactggc cacactgggc agcattttta
      661 agttctcacg ggatagcgag cgagaggccg atcagcttgg tttcgagttg accactgtgg
      721 cgggctacga ttctcgggaa gcgggcaagc tttgggaggc gctgcttaag gagcgggatg
      781 cggccaaaga tcccacccct tgggtgttct tctccaccca cccgccgaca aaagagcgga
      841 ttgccacgct caatcggctt gccgatgagt tcgccgataa gcacaagcct gaaatcacag
      901 ggaaggaacc ttacctcgct actgtgggac cctggcacgg gatgctgcta cgtgatgaat
      961 tgcagcaacg tcagttcgct cgtagccagg tgctgctgga ccgtttat
//
LOCUS       DASQSL010000382         1040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_3317, whole genome shotgun sequence.
ACCESSION   DASQSL010000382 DASQSL010000000
VERSION     DASQSL010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3317"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..192)
                     /locus_tag="VE844_03840"
     CDS             complement(<1..192)
                     /locus_tag="VE844_03840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015201226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HZC00509.1"
                     /translation="MRISLRRILLGSPLPSEAYVHQRLNKRKALAVFSSDALSSVAYA
                     TEEILLVLVTAGVAALTLSL"
     gene            576..731
                     /locus_tag="VE844_03845"
     CDS             576..731
                     /locus_tag="VE844_03845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00510.1"
                     /translation="MLHGFEVVTVQASIPLNLVQRWLGHAQLATTTIDAEAVGKEEWD
                     IAARMGQ"
     gene            728..>1040
                     /locus_tag="VE844_03850"
     CDS             728..>1040
                     /locus_tag="VE844_03850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00511.1"
                     /translation="MSENFRQLSPFHSHTGMTSIQAGAVIALPLLLLFIGVFLWSPGD
                     VNWFQSAFERSVKKLHMIHTMSRDLLASAEAERSAVMAETDEASHAFAEQSIQAAQNV
                     EK"
BASE COUNT          265 a          276 c          294 g          205 t
ORIGIN      
        1 cagcgaaagc gtaagcgccg cgacgccagc agtcaccagc acgagcagaa tctcttccgt
       61 cgcgtaagcc accgacgata gcgcgtccga agagaacacc gccagcgcct ttcttttatt
      121 caggcgttga tgcacatagg cttcggaggg caggggactg cctagcagga tacgacgcaa
      181 cgatatcctc acagcatgct ccacgaaatc aaagcaccac aacggggctc caggcgtgat
      241 tggacagtaa tggaacatgt tccattatcc ggcgataacg tctcgaaacc cacaatatgc
      301 ctcatggtac cgcccggcgt gatgatcatg agcgttagaa tggaatctat tgaggggtca
      361 ttcaccaggc ggagacggac ctaaggcgct ctgtgagtaa cagcatggca ctctgaagta
      421 ctataagaca cccgagctaa agattttgta aaaaccacgc cggatgtcgt aaagattttg
      481 taaaaagact ctaatataag gagttacggt gccacatgcg gcgatgcggt gatggacgag
      541 gcgggaatcg agggctatca tgccagtcga aggggttgct gcatgggttc gaagtagtga
      601 ccgtgcaggc cagcatccca ctcaacctcg tgcagcgctg gttgggacac gcccagcttg
      661 ctaccacgac gattgatgcc gaagccgtgg gcaaggagga atgggacatc gcggcgagga
      721 tggggcaatg agcgaaaact tccgacaact gagccctttt cactcacaca caggcatgac
      781 cagtatacag gcaggagccg tcatcgcctt gcccctgctc ctactcttta tcggcgtttt
      841 cctttggagc cctggggatg tcaactggtt tcaaagtgct tttgaacgct ccgtgaagaa
      901 gctccacatg attcatacca tgagtcgtga cctcctggct tccgccgagg cggaaaggag
      961 cgcggtcatg gctgagacgg acgaggcctc tcatgccttt gccgagcagt ctatacaagc
     1021 ggcgcaaaac gtggaaaaag
//
LOCUS       DASQSL010000383         1049 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_17208, whole genome shotgun sequence.
ACCESSION   DASQSL010000383 DASQSL010000000
VERSION     DASQSL010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17208"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(96..404)
                     /locus_tag="VE844_03855"
     CDS             complement(96..404)
                     /locus_tag="VE844_03855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00512.1"
                     /translation="MRCRRRSGSGCGWWSLRRRRRGGRTWGWSTLPACSAHPWKGGRI
                     IFAESLYLTEGEQWALDHIAKQELDTAVATAFFDDPGRLNRDILGDAAVAYLNTLSLE
                     "
     gene            complement(458..1003)
                     /locus_tag="VE844_03860"
                     /pseudo
     CDS             complement(458..1003)
                     /locus_tag="VE844_03860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015166165.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS982 family transposase"
BASE COUNT          230 a          311 c          289 g          219 t
ORIGIN      
        1 acggcagcaa gccccatgtg tctggatctc ataagccttc tcccattccg cgttatcatc
       61 gagcagagcg gagtcacgcc cgccgagcga caagatcact ccagagatag cgtgttcagg
      121 taggcgacag cggcatcccc cagaatgtcg cggttgagcc ggcccgggtc gtcgaagaag
      181 gcagtcgcta ctgccgtgtc tagttcctgc ttggcgatgt ggtccagcgc ccactgctcc
      241 ccttcggtca aatagagcga ctcggcaaag atgatccggc ctcccttcca cgggtgcgcc
      301 gagcaggcgg gcaaagtact ccagccccag gtccgcccgc cgcgcctgcg gcgcctcaac
      361 gaccaccacc cgcagccgct gccactcctc cgccgacatc tcacgccgcc agatcctcat
      421 ctagtggtga taggtgtcga tctccagtcg aacggcggct gcgatggcgg gaatgctcga
      481 tttgcgagat atttttgagt tggtcgttga cggtctcaac gagagaacgt ttgcgtaaca
      541 gcagcttatc taacaagggt aacaacgtgt ttttcatgtt cttacgcagt ttggtaatca
      601 attgcacgcc ctgttcccaa agctgttcaa agagcttttg ggagatataa cctcgatctc
      661 caaacagctt gccggacaac gcacgggcca attccagcac cgggttgcgg tcatccacat
      721 taccagccgt gattttgact gccagtagtt cgccgcagtc attgaccacc aagtggagct
      781 tgaagccata aaaccagtcc acgctggtct tgccacgttt agctagggct ttgaggactt
      841 tgtgtgacca gatgcggcgg ttgtggcaga cactgatctt ggtcgagtca atgaaactga
      901 tcccgctgca ttgcccaaag cgtgccctca gcagcacaca cagcgggagg agcgcaccgg
      961 gcatcaattc cacaaagcgc tgagagctga ccaacctcgg aaagtaatgt aacgggtgga
     1021 gtagccttta aggtgcggta gccggacag
//
LOCUS       DASQSL010000384         1406 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_3328, whole genome shotgun sequence.
ACCESSION   DASQSL010000384 DASQSL010000000
VERSION     DASQSL010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1406
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3328"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(122..>1406)
                     /locus_tag="VE844_03865"
     rRNA            complement(122..>1406)
                     /locus_tag="VE844_03865"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          252 a          472 c          367 g          315 t
ORIGIN      
        1 tcggccggcc tgagccgacc gccgtcccca cccagcaggg gtggcggagc gatcgtggcg
       61 atcaacctgg gagggtgtga acgctggcgc ctcaccgatg gcaccagctc cctctcccta
      121 gaaaggaggt gatccagccg caccttccgg tacggctacc ttgttacgac ttcgtcccag
      181 tcaccaatcc caccttcgac ggctgcctcc ttgcggttgg cccaccggct tcgggtgtta
      241 tcggcttcca tgacgtgacg ggcggtgtgt acaaggcccg ggaacatatt caccgccgta
      301 tgctgaccgg cggttactag caactccagc ttcacgtagg cgagttgcag cctacgatcc
      361 gaactgagac cggctttaag ggattagctc cacctcgcgg tttcgcagcc cgttgtaccg
      421 gccattgtag cgtgggtgta gcccaggacg taagggccat gctgacttga cgtcatcccc
      481 accttcctcc gagtttctct cggcagtccc gtgtgagtga tacaacacac agtaggggtt
      541 gcgctcgttg cgggacttaa cccaacatct cacgacacga gctgacgacc gccatgcaac
      601 acctgtggcc aggccccttg cggggcgccg acgtttccgc cggattcctg gtcatgtcaa
      661 gccttggtaa ggttcttcgc gttgcgtcga attaaacccc acgctccgct gcttgtgcgg
      721 gcccccgtca attcctttga gttttagcct tgcggccgta ctccccaggc gggacactta
      781 atgcgttagc tacggcactg gtggggttga taccaccaac acctagtgtc catcgtttac
      841 ggctaggact accggggtat ctaatcccgt ttgctccccc agctttcgcg cctcagcgtc
      901 aagaacaggc caggaagtcg ccttcgccac tggtgttcct ccggatatct acgcatttca
      961 ccactacacc cggaattcca cttccctctc ctgccttcga gtcgatcagt atcgagtgac
     1021 cctccccagt tgagccgggg gctttcacac tcgacttgaa cgaccgcctg cgcgctcttt
     1081 acgcccagta aatccggaca acgcttgcca cctacgtatt accgcggctg ctggcacgta
     1141 gttagccgtg gcttcttcct caggtaccgt catcatcttc cctgagaaaa gaggtttaca
     1201 acccgaaggc cttcatccct cacgcggcgt tgctgcctca gactttcgtc cattgggcaa
     1261 aattcccgac tgctgcctcc cgtaggagtc tgggccgtgt ctcagtccca gtctgggtga
     1321 tcgtcctctc agaccaccta ccgatcgtcg ccttggtgag ccattacccc accaacgagc
     1381 taatcggacg caggcccctc ccgaag
//
LOCUS       DASQSL010000385         1088 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_71673, whole genome shotgun sequence.
ACCESSION   DASQSL010000385 DASQSL010000000
VERSION     DASQSL010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71673"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..126)
                     /locus_tag="VE844_03870"
                     /pseudo
     CDS             complement(1..126)
                     /locus_tag="VE844_03870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009546755.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS982 family transposase"
     gene            258..>1088
                     /locus_tag="VE844_03875"
     CDS             258..>1088
                     /locus_tag="VE844_03875"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00513.1"
                     /translation="MIHKQLSNVGRCFKQIFSEQVLNALGKSTRFCQRVREITPYRLA
                     LGLIEVFSTMRVETIADVHRGFNALCERKVQYKPFHNQLVKEGFPIFTRNLCERLMEQ
                     LTVEVLRFTPKSPFAKFSHILVHDGTSFGIKSALKKVYPGRFTKTSPAAVELHVSMDL
                     LSEGLDLVTLTPDSESEVHHAPAPHTIAGGLFLGDRMFFNKPYLASIEAEGGFFVVKA
                     KGNLNPTIRRVYTPEGREIKRYRNQPLATLKPKMGRYKVLDLDVEWEGELKARLVVTW
                     N"
BASE COUNT          248 a          306 c          306 g          228 t
ORIGIN      
        1 cttggtcgag tcaatgaaac tgatcccgct gcattgccca aagcgtgccg tcaacagcac
       61 acacagcggg agtagcgcac ccggcatcaa ttccacaaag cgctgctagc tgaccagcct
      121 cggaaagtaa tgcaactggt ggagtagcac gtgcccatag gtaggatctt taaactcttt
      181 gataaataat gggaacttct gggtgtcccc tcgatcggat caaccctcaa gtgaatgatt
      241 cgatggggga gggcccaatg atacacaagc aactcagcaa cgtggggcgt tgtttcaagc
      301 agatcttctc ggagcaggtg ctcaatgcct tgggcaagag cacgaggttt tgccaacgtg
      361 tgcgcgagat cacgccctat cgactggcgc tcggactcat cgaagtcttc tccaccatgc
      421 gcgttgagac gattgccgat gtgcatcgcg gcttcaatgc attgtgtgag aggaaggtgc
      481 aatacaaacc tttccacaat caattagtga aggaggggtt ccctatcttc acgcgcaacc
      541 tctgcgagcg attgatggag cagctcacgg tcgaggtctt gcgcttcacg cccaagagtc
      601 cctttgccaa gttcagccat atcctggttc acgacggcac gtcctttggt atcaagtcgg
      661 cgctcaagaa ggtctatcct gggcgcttca ccaagacgag cccggccgcg gtcgagctgc
      721 atgtgagcat ggatctcttg agcgaggggt tggacctcgt gacgctcact cccgacagcg
      781 agtccgaagt gcatcacgcg cctgcgccgc acacgatcgc cgggggactc tttctcggcg
      841 atcggatgtt tttcaacaag ccctacctgg cctcgatcga ggcggaaggt ggctttttcg
      901 tagtcaaggc caaaggcaac ctgaatccta ccatccgtcg cgtctacacc cccgaggggc
      961 gcgaaatcaa acgctaccgc aaccaaccgc tcgcgacctt gaagcccaag atggggcgat
     1021 ataaagtgct cgatctcgat gtggagtggg agggcgagct taaggcacgc ttggtcgtga
     1081 cctggaac
//
LOCUS       DASQSL010000386         1573 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_84052, whole genome shotgun sequence.
ACCESSION   DASQSL010000386 DASQSL010000000
VERSION     DASQSL010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1573
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84052"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..686)
                     /locus_tag="VE844_03880"
     CDS             complement(<1..686)
                     /locus_tag="VE844_03880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZC00514.1"
                     /translation="MSTRARRWAFAGLVAAALLAIYMTSLRQGYEALLALLDLVSRTP
                     PAALDIRPAARRSEINFEVETRRYSADLYQPTGQVLAGIVFIPGAAPAGKEDPRVISF
                     ATIFTRCRFAVLVPDITALRELKLLPETARDVADALTYLLSRQDLAPQGRGGVVTSSV
                     GIGPTLLGVLEPSLPSRVRFFLSIGGYYDLPRLLTYFTTGHYQAHGVSLNDHPYEYGK
                     WVYALSNASRL"
     gene            complement(742..>1573)
                     /gene="prmB"
                     /locus_tag="VE844_03885"
     CDS             complement(742..>1573)
                     /gene="prmB"
                     /locus_tag="VE844_03885"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: protein motif:HMM:TIGR03533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008276 - protein methyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA];
                     GO_process: GO:0042273 - ribosomal large subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HZC00515.1"
                     /translation="AAELCYGHGTREPLDEAVYLVFSAAGIEFYCDDALLDRPLTEAQ
                     IQRAQAFIIARIKTRKPAAYIAREAWFAGLGFYVDERVLVPRSPIAELIEAGFSPWIK
                     PEKARRILDIGTGSGCIAIACALAFPEAQVDAVDVSPEALDVAQRNVDRYQLRDRIEL
                     VHSDLFEGLQDRRYDLIVSNPPYVPTHEIAELPIEYLHEPSPGLAGGHNGLEIVKRLL
                     AQVSTHLTEAGIVVVEVGDSEAALVSQYPHVPFLWLDFERGGEGVFLLQATEIKEFFG
                     "
BASE COUNT          351 a          455 c          469 g          298 t
ORIGIN      
        1 agccggctcg cattgctcag ggcatagacc catttgccat attcgtaagg gtgatcgttt
       61 agcgacacac cgtgagcctg gtaatgaccg gtggtgaaat aggtgagcag gcgcggcaga
      121 tcatagtagc cgccgatgga gagaaaaaat cgcacccggc tagggagtga aggttcaagc
      181 acgccgagca gggttgggcc gatcccaaca ctgctggtca ccacaccccc acggccttga
      241 ggcgcgagat cctggcgtga gagcagatag gtgagcgcgt cggctacatc gcgcgcagtt
      301 tcgggcaaga gcttgagttc ccgcaacgcg gttatatcgg gcaccagtac tgcaaaacgg
      361 caacgtgtaa agatggtcgc aaagcttata acacgcggat cctctttgcc ggcaggcgct
      421 gcccctggga tgaagacaat acctgcgagc acttgaccag tcggctggta aagatcggca
      481 gaatagcggc gcgtctctac ctcaaagttg atctcgctgc gtctggccgc tggacggata
      541 tcgagcgctg cgggtggggt gcgacttacc aggtccaaaa gtgcaagcag tgcctcgtag
      601 ccctggcgca aactggtcat ataaatggca agcagggcgg ctgccactag cccggcgaaa
      661 gcccaccttc gagcacgcgt actcatcggg tttgtcgatc aaattccctc ttgcccagag
      721 aacaggtagg tgtttctccg tttagccaaa gaattccttg atctcagtcg cctgcagcaa
      781 aaacaccccc tcacccccgc gttcgaaatc aagccataaa aagggcacgt gtgggtattg
      841 gctcaccagc gctgcttcgc tatcaccgac ctcaaccacc acaatccccg cttcagtcag
      901 atgcgtggag acctgggcca ggaggcgctt gacgatctca agtccgttgt ggccaccggc
      961 cagacccggt gacggctcgt gcaggtattc gatcggcagt tcggcgatct catgggtggg
     1021 gacatagggc ggattgctca cgatgaggtc ataacgacgg tcttgcagcc cctcgaacag
     1081 atcggagtga acgagctcga tccgatcgcg taactgataa cggtcaacgt tgcgttgcgc
     1141 aacatccagg gcctccggtg aaacatcgac tgcatcgacc tgcgcttcgg ggaaggccag
     1201 ggcacaggcg atcgcgatac agccgctgcc ggtaccgata tcgaggatcc gccgggcctt
     1261 ctcgggcttg atccagggtg agaaacccgc ctcgataagc tctgctatcg gggagcgcgg
     1321 caccaatacg cgctcatcga catagaatcc aagccccgca aaccaggcct ctctggcaat
     1381 ataggcggcc ggtttgcggg tctttatcct ggctatgata aatgcttggg cgcgctggat
     1441 ctgcgcctcg gtgagtggcc gatccagcag ggcatcgtcg cagtagaact cgatccccgc
     1501 tgcggaaaag accaggtaaa cggcttcatc taaaggttcc cgggtgccat ggccgtagca
     1561 gagctcggcc gca
//
LOCUS       DASQSL010000387         2441 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_193729, whole genome shotgun sequence.
ACCESSION   DASQSL010000387 DASQSL010000000
VERSION     DASQSL010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2441
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193729"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(134..349)
                     /locus_tag="VE844_03890"
     CDS             complement(134..349)
                     /locus_tag="VE844_03890"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: protein motif:HMM:NF014021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HZC00516.1"
                     /translation="MNQVVAFPPVTEELLQEAVQRILSVGSPEKIVLFGSWARGQARS
                     DSDLDLLIIEESDLPRQRRAGRYRRLY"
     gene            complement(421..1512)
                     /locus_tag="VE844_03895"
     CDS             complement(421..1512)
                     /locus_tag="VE844_03895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011478976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter ATP-binding protein"
                     /protein_id="HZC00517.1"
                     /translation="MSIEVQNISKRFGPFVALNNVSLDIPSGELVALLGPSGCGKTTL
                     LRIIAGLEVPDSGRILFHGEDATAQHARERGVGFVFQHYALFRHMTVFENVAFGLRVK
                     PRKGRPSEAKIRSRVHELLRLVQLDWLADRYPSQLSGGQRQRIALARVLAVEPKLLLL
                     DEPFGALDAKVRKDLRRWIRHLHDELHITSVFVTHDQEEALEVADRVVVLNAGQIEQI
                     GTPDEVYEQPATPFVYHFLGDVNLFHGRVHAGRASIGEIEVTLGDHQDARDAPALVYV
                     RPHDIEVDRKPNGEGGIEAIVRDVRQLGATVRLELERRDGGGLVEAQMSRDRYRDYEL
                     QSGEQVFIRPQNLRIYFKEGESTNCAKSV"
     gene            complement(1502..2389)
                     /gene="cysW"
                     /locus_tag="VE844_03900"
     CDS             complement(1502..2389)
                     /gene="cysW"
                     /locus_tag="VE844_03900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009522727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysW"
                     /protein_id="HZC00518.1"
                     /translation="MAETIALNISNYTHATAESGLVRRLLIGLALMFLGVFLWVPLIA
                     VFAEALSNGFTAYLAAFNDADAQAAIRLTLLTAAIAVPLNLVFGVAAAWAIAKFEFHG
                     KSLLITLIDLPFSVSPVISGLIYVLLFGLQGWLGPWLAAHDLKLIFAVPGIVLATIFV
                     TFPFVARELIPLMQEQGTEEEEAAVLLGANGWRTFWRVTLPNVKWGLLYGVILCNARA
                     MGEFGAVSVVSGHIRGLTNTLPLHVEILYNEYNFVAAFAVASLLTLLALVTLVAKSLL
                     EWKIRRHQALALKESIDEH"
BASE COUNT          569 a          733 c          685 g          454 t
ORIGIN      
        1 atacaacctt cgtctgaatg gggaagatat agagatcgag atttaaagat caagaaggtg
       61 ataacggagt atgttgaggc gctgggccgc ggaagcgacc ctcctctccc ctcttccgga
      121 gcggggaaaa ggctcagtaa agcctacggt agcgtcctgc ccgacgctgg cgcggcaagt
      181 cggactcttc aatgatcagc aaatccagat cgctatcaga tcgggcttgg ccgcgcgccc
      241 acgaaccaaa caagacgatc ttttccggcg atccaacgga caaaatccgc tgcacggctt
      301 cctggagcag ttcctcagta acaggaggaa acgcgacaac ctggttcatc aggcattcct
      361 tttcgatttc acttgctcct ctccaagcac cgcgcccggc tgcttaatat tattctacca
      421 tcagacagat ttcgcgcagt ttgttgactc accctcttta aagtatatac ggagattctg
      481 aggccggata aacacctgtt cccctgattg taattcatag tcccgatagc gatcccggga
      541 catttgcgcc tcaacaagac caccgccatc ccggcgctcg agctctagac gcaccgtggc
      601 cccgagttgg cggacatcgc gcacgatcgc ttcaatgcct ccttcgccgt tcggtttgcg
      661 atcgacctcg atatcgtgcg gacgcacgta gacgagcgca ggggcgtcgc gcgcatcctg
      721 gtgatcaccc agcgtgactt cgatctcgcc gattgaggcg cggccggcat gcacccggcc
      781 atgaaacagg ttcacatcgc ccaggaagtg atacacaaag ggggtcgccg gttgctcata
      841 gacctcgtct ggggtgccga tctgctcgat ctgccccgca tttaagacca ccacacggtc
      901 ggcgacctcc agggcctctt cttggtcatg ggtaacgaat acactggtga tatgaagctc
      961 atcatgcagg tgccggatcc agcggcgcag atccttgcgc accttggcat cgagcgcgcc
     1021 gaagggctca tcgaggagca ataatttagg ctccacggcg agtacccggg ccaatgcaat
     1081 gcgctgacgc tggccaccag agagttggga aggatagcgg tcagcaagcc agtcgagctg
     1141 cacgagcctg agcagctcat ggacccggct ccggatcttg gcctcggaag ggcggccttt
     1201 tcgcggttta acccggagtc caaaggccac gttttcaaac acggtcatat gtcgaaacag
     1261 ggcgtagtgc tgaaacacaa agccgacccc gcgctcgcgg gcgtgttgcg ccgtggcgtc
     1321 ttccccgtga aacaggatac ggccgctgtc gggcacctcc aggcccgcga tgatccgaag
     1381 cagtgtggtc ttaccacaac cggagggccc caagagcgcc acgagctccc cggaaggtat
     1441 gtccagactg acattgttca atgccacgaa ggggccaaaa cgcttgctaa tgttctgaac
     1501 ctcaatgctc atcaatgctc tcctttaagg ccagcgcctg atgacgccgg atcttccatt
     1561 ccaacaggct ctttgcgacc agtgtcacaa gcgctagcaa ggtcagcaag gaggctaccg
     1621 caaaggcggc gacgaagttg tattcgttgt acaggatctc gacatgcaac gggagggtgt
     1681 tggtcaaacc gcggatatgt ccggagacca ccgatacggc gccaaactcc cccatggcgc
     1741 gcgcattgca gaggataacc ccatagagca atccccactt cacattcggc agggtgacgc
     1801 gccaaaaggt acgccagcca ttggccccga gcaggaccgc ggcctcttct tcctcggtgc
     1861 cctgttcctg catcaacggg atcaactcgc gcgccacaaa cggaaaggtc acaaagatcg
     1921 tggcgagcac gatcccgggg acggcgaaga tgagcttgag gtcatgggcg gccagccagg
     1981 gtcccaacca gccttggagg ccaaacaaaa gaacgtagat caagcccgag atcaccgggg
     2041 atacggaaaa aggcagatcg atgagggtga taaggagact cttgccatgg aactcgaact
     2101 tggcgatggc ccaggcggcg gccaccccaa atacgagatt caagggcacc gcaatcgcgg
     2161 cggtcaacag agtgagccgg atggccgcct gggcatcggc atcgttgaac gcggcgagat
     2221 aggccgtaaa cccattgctc agggcctcgg cgaatacggc aattaagggc acccatagaa
     2281 acactcccaa aaacatgagc gccagcccta tcagcagccg acgcaccagc ccggattcgg
     2341 cggttgcatg cgtgtagtta cttatgttta aggcgatcgt ctcagccata agtacctctt
     2401 tttacctcgg ggcatagcac cgactacccc agcgctgcag c
//
LOCUS       DASQSL010000388         1386 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_84056, whole genome shotgun sequence.
ACCESSION   DASQSL010000388 DASQSL010000000
VERSION     DASQSL010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1386
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84056"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(321..>1386)
                     /locus_tag="VE844_03905"
     CDS             complement(321..>1386)
                     /locus_tag="VE844_03905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00519.1"
                     /translation="TAGARILKEATAQQMHSTAYTPDPRLLGAAYGFADMSDNGQRTL
                     GHTGYFPPMSGLLLLLPEQNLGVFVAYNSEGGRDLTNQHSGFQRAFFDHYYPAREVKP
                     IQPPADFAERAGRFVGLYRHASWPATTFQKVGGLVGEGTVEISDPGDGTLLLSIAGYE
                     QRFVEEEPLYFRQVDGQFGLVFSEDDQGRITHMYTDLMPQYTGVKLNWYETPGFNLPL
                     LLVCVLVFLSMIPVVLIRFIRNRRPSSDRKPASRGARVAYWIIVGICVLNLLFVVGMV
                     PGFNPPTELHGTQLIVKIVLGVGVLSAVLTVGALIYSVLAWKNSYWGIAARVHYTLVT
                     VAALAFVWFLNYWNLLGWRF"
BASE COUNT          315 a          408 c          387 g          276 t
ORIGIN      
        1 agtatggaac attacgaact ccgacggaat cccagctgcg aagaacccca aagcgagaac
       61 ggcaactacc aaccatgctc cgcgagcaag aaccagcgtc cgtccgcgca ggggtttgac
      121 ggtgatgggc gtagcctcag acggggttga agcaggcgta gggctcacgc gtacgctcct
      181 cgtgttttgt tgcggcgtcc tatttggata cactggcggt tcatcttcct gctatccaag
      241 gtctccatga tgccacgccc gtctgtcctt cgcccgcctt ggtactggtc tggctactag
      301 aggcttccga aacctatctg ctagaaccgc caacctaaga ggttccagta gttcaggaac
      361 cacacaaaag cgagcgccgc aaccgtcacc agcgtgtaat gcacgcgggc agcgatgccc
      421 cagtagctgt tcttccaggc cagcacactg tagatgagcg cgccgactgt cagcacggca
      481 gacaaaacac ccactcccag cacgatctta acgatcaatt gggtgccatg tagttccgtt
      541 ggcggattaa accccggaac cataccgacc acgaacaaaa ggttcagaac gcagatcccc
      601 acgatgatcc agtaagccac gcgggcgccg cgagaggcgg gtttccggtc actgctcggg
      661 cggcggttcc gaataaagcg gatcaatact acggggatca tggacaggaa taccaagacg
      721 cacaccagaa gcaatggcaa gttgaagccg ggcgtttcgt accagttaag cttcacacca
      781 gtatattgag gcatcaggtc ggtatacatg tgggtgatgc gcccctggtc gtcctcacta
      841 aagaccaggc cgaactgacc gtccacctgg cggaagtaga gcggctcctc ttcgacaaat
      901 cgctgctcat accccgctat ggacaggagc aatgtgccgt cgccgggatc gctgatttct
      961 actgtacctt cacccacgag ccctccgact ttttgaaagg tggtagccgg ccaactggcg
     1021 tgtctataaa gacccacgaa ccgaccggcc ctctccgcga aatccgctgg aggttgtatt
     1081 ggcttgactt cacgtgcggg atagtagtgg tcgaaaaacg ctctctggaa gccactatgc
     1141 tgattggtca ggtctctacc accctcgctg ttgtatgcca caaatacacc caggttctgc
     1201 tcgggcaaaa gcagtagcag accagacatc ggtgggaaat aaccggtatg cccgagcgtt
     1261 cgttggccgt tgtcgctcat atcggcaaag ccgtaagcgg cgcccaggag gcgcgggtcg
     1321 ggagtgtacg ccgtgctgtg catttgctgc gctgtggctt ccttcaggat gcgtgccccg
     1381 gcagtg
//
LOCUS       DASQSL010000389         1615 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_154237, whole genome shotgun sequence.
ACCESSION   DASQSL010000389 DASQSL010000000
VERSION     DASQSL010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1615
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154237"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(163..1377)
                     /locus_tag="VE844_03910"
     CDS             complement(163..1377)
                     /locus_tag="VE844_03910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015244411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS701 family transposase"
                     /protein_id="HZC00520.1"
                     /translation="MATIVDFPTVVKDALDIFGDLFANEPARRHFAEYLTGLITAENK
                     TVSGINREFVVTTDQSCLNRWLTEVSWDTKAFNDRRLEWLQRDPKRRYSSRGVIAIDN
                     TLVDHAGKLIEDVGWFWDHANERYVIAHDYLISNYVCPSGAPYPIEWRRFKKRDACEP
                     NVFKDHTELCIELIDDAMARGIPGDFTFDSYFTSAKVLNHIESQKRSYVGDLKLNRKV
                     VYEGREQALQAVARQIPWQAKKPVRVGNRRYWYFSKQMRIPDVKHPVRIVLFWRARGD
                     GPASKALVSNRLTWEVIRMVLVYRHRWTGTETLHRDGKQELGLGDCQVRSGEGHTRHV
                     YLVSAAYSLLMRSLHQSRPQEWARRVLTTIGEACGAVKGEQLGQLVDWIVDKLADDHW
                     SLAQIKAVLAQT"
     gene            complement(1344..>1615)
                     /locus_tag="VE844_03915"
     CDS             complement(1344..>1615)
                     /locus_tag="VE844_03915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00521.1"
                     /translation="QAWDAYVTHQFRHKKARKRRYGGGRKPHLLAIADKLFFILFDFK
                     VYPLLSFCKLGRLSYSGWHLSGSNPSANRAGRIPSWRPLSTFRPW"
BASE COUNT          366 a          465 c          427 g          357 t
ORIGIN      
        1 cagagactga atactttggg ggaatcacaa gcatcaagtg gatgtgatcc aattggatgc
       61 taaacgtctc gatttcaatg tcaggataaa acatctcgat gtcgaacaag cctttttcta
      121 ggtcctgcct gaacttttgc aatctgcccc aacacggcgc gatcaagttt gggcaagaac
      181 agccttgatc tgagcaagcg accaatggtc atcggcgagt ttgtcaacaa tccagtcaac
      241 cagctgcccc agctgttcac ctttgaccgc cccacaggct tcgccgatgg tcgtcagcac
      301 acgccgagcc cattcctgcg gacggctctg gtggagcgaa cgcatcagca gactgtacgc
      361 tgcgctgacg agatagacgt ggcgggtatg cccctcgccg ctgcgcacct gacaatcgcc
      421 gagtcccaac tcctgcttac cgtcccgatg caacgtctcg gtgcctgtcc agcggtgccg
      481 gtacaccaac accatgcgga tgacctccca cgtcagtcgg ttactcacca aggctttgct
      541 cgctggccca tcaccgcgcg ctctccaaaa caacacaatc cgtacggggt gcttcacatc
      601 aggaatccgc atctgtttgc tgaaatacca gtaacgccga ttgcccacgc gcacgggctt
      661 tttggcctgc cagggtatct ggcgcgccac cgcctgaagc gcctgttccc gtccctcgta
      721 gaccaccttg cggttgagct tcagatcgcc tacatacgac cgcttttgac tctcaatgtg
      781 gttgagcacc ttggcgctgg tgaaatagct atcgaacgtg aagtcgcctg gaataccacg
      841 ggccatggca tcgtcgatca actcgataca caactcggtg tgatccttga aaacgtttgg
      901 ctcacacgcg tctcttttct tgaaccggcg ccattcaatg ggatagggcg cgcccgaggg
      961 acagacgtag ttggagatca ggtaatcatg ggcgatgacg tagcgctcgt tggcatggtc
     1021 ccaaaaccag cccacgtctt caatcagttt gccggcatga tccaccaggg tattgtcgat
     1081 ggcaatcacc ccgcgcgagc tataacgcct tttggggtct cgttgcaacc actcgaggcg
     1141 ccggtcgttg aacgccttgg tgtcccagga gacctcggtg agccaacggt tcaagcagga
     1201 ctgatccgtg gtcacaacaa actctcggtt gatgccactg acggtcttgt tttcggcagt
     1261 gatcagaccg gtgaggtatt cggcaaaatg gcgtcgtgcg ggttcgttgg caaagaggtc
     1321 gccaaagata tccaaggcat ctttcaccac ggtcggaaag tcgacaatgg tcgccatgag
     1381 ggaatcctcc ccgcgcggtt agctgaaggg ttggaaccag agagatgcca tccactatac
     1441 gatagtctgc caagtttgca aaagctcagt aaggggtaga ctttgaaatc aaacagaatg
     1501 aagaacaact tatctgcaat cgccaacaga tggggtttgc gaccgccacc ataacgtcgc
     1561 ttgcgtgcct ttttatgccg gaactgatgg gtgacataag cgtcccaggc ctgtt
//
LOCUS       DASQSL010000390         2678 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_98348, whole genome shotgun sequence.
ACCESSION   DASQSL010000390 DASQSL010000000
VERSION     DASQSL010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2678
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98348"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..143
                     /gene="rpsO"
                     /locus_tag="VE844_03920"
     CDS             <1..143
                     /gene="rpsO"
                     /locus_tag="VE844_03920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012401401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HZC00522.1"
                     /translation="KTHPKDHHSRQGLLRMVNHRRKLLDYLKKCDLDRYRGLIAKLGL
                     RK"
     gene            230..2335
                     /gene="pnp"
                     /locus_tag="VE844_03925"
     CDS             230..2335
                     /gene="pnp"
                     /locus_tag="VE844_03925"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006748470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HZC00523.1"
                     /translation="MTIRKTFQFGAHTVALETGEIARQASGAVLASMGDTVVLVTVVG
                     NKDAVAGRDFFPLTVDYQERTYAAGKIPGGFFKREGRPTEKETLTSRLIDRPLRPLFP
                     KGFNQEVQIIATVLSLDPEIDPDIPALIGASSAVSLAGMPFNGPIGAARVGYKDGSYL
                     LNPTLSELETSDLDLVVAGTETSVIMVESQARHLSEEVMLGAVMFGHEQMQIVIKNIR
                     EFVREAGPTPWVWQPPEAQEALMNEVESRFRGPLSEAYAIAEKLKRRDRLVALRKEAL
                     ASFAQTEEGAESRWPEAEILAAFEKLEYRLVRSLILESGRRIDGRSGQEVRPIHIRVG
                     VFPRTHGSALFTRGETQALVITALGTERDAQIVDAIEGERKEAFMLHYNFPPYSVGET
                     GRIGSPKRREIGHGRLAKRGIQAVMPEPDAFSYVVRVVSEITESNGSSSMATVCGASL
                     SLMDAGVPIKAPVAGIAMGLIKEGERFVVLSDIMGDEDHLGDMDFKVAGSAKGITALQ
                     MDIKIEGITREIMGVALKQAKEGRLHVLDEMNAVIAKPRQEMSEYAPRIITLKIHPDK
                     IRDVIGKGGATIRAITEQTGATIDISDDGTVKIASTNNAAGQEACRRVEQITADVQVG
                     MVYEGRVAKLMDFGAFVTILPGKDGLVHISQISDERVENVSDKLREGDIVKVKVLEID
                     KQGRIRLSMKAVNSSISSR"
     gene            complement(2420..2620)
                     /gene="rpmE"
                     /locus_tag="VE844_03930"
     CDS             complement(2420..2620)
                     /gene="rpmE"
                     /locus_tag="VE844_03930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013034756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HZC00524.1"
                     /translation="MKSEIHPLYKEITVTCSCGNTFKTRSILARDLHIDICSACHPFY
                     TGKQKIIDTAGRVERFRRKYKI"
BASE COUNT          621 a          693 c          774 g          590 t
ORIGIN      
        1 ttaaaacgca tcccaaagac catcattccc gtcaggggtt gctgcgcatg gtaaaccatc
       61 gacgcaagtt gcttgattat ctcaaaaaat gcgatcttga tcgctaccgc ggactgatcg
      121 ctaaactcgg tctgcgcaaa taaggggtgg cacttcaagt agatctagga cccttcccct
      181 ctcaataaga caacatatca tcaagagttc acaagattct tattctcaca tgactataag
      241 aaaaaccttt cagtttggcg ctcatacggt cgcccttgaa accggcgaga tcgcccggca
      301 ggcctcaggt gcggtgttgg ccagtatggg tgacaccgtg gttttggtga cagtggtcgg
      361 caataaggac gctgtggccg gtcgagattt ctttccattg accgtggatt accaggaaag
      421 aacctatgcg gcgggcaaga tcccgggcgg cttctttaaa cgcgaaggcc gtcccacgga
      481 aaaggaaacc ttgacctcgc gcctcattga ccgcccccta aggccgctct ttcccaaggg
      541 atttaaccag gaggtgcaga tcattgccac cgtgctctcc ttagatcccg agattgaccc
      601 ggatatcccg gccttgatcg gcgcctctag cgcagtgagc cttgcgggca tgcctttcaa
      661 cgggccgata ggtgcggcgc gcgttggcta taaagatggc agctatctgc taaatcccac
      721 gctgagtgaa ctggaaacct cggatctgga tctcgtggtc gctggtaccg agacctccgt
      781 aatcatggtg gaatcgcagg ccaggcacct ctcggaagag gtgatgctgg gcgctgtcat
      841 gtttggccat gagcagatgc agatcgttat caaaaatatc cgcgagtttg tgagggaggc
      901 aggtccaacg ccttgggtat ggcagcctcc cgaggcgcaa gaagcgctca tgaacgaggt
      961 cgaatcccgt ttccgcggac ccttgagcga ggcctatgcg atcgctgaaa agttaaagcg
     1021 ccgggatcgc ctggtggcat tgcgtaaaga ggcgctagca agcttcgctc agaccgagga
     1081 aggcgctgaa tcgaggtggc cggaagcaga gatcctcgct gcttttgaga aactcgaata
     1141 ccgtctcgta cgcagcctga tccttgagag cggcagacgt atcgatggcc gcagcggtca
     1201 ggaggtgcgc cccatccata tccgtgtcgg ggtatttcct cgtacacacg gttccgcctt
     1261 gttcacccgc ggcgaaacgc aagcgttggt gatcacggcc ctgggcacag agcgtgatgc
     1321 ccagatcgtc gatgcgatcg aaggtgagcg taaggaagcc tttatgctgc attataactt
     1381 tccgccttat agtgtgggcg agaccggcag gatcggttct cccaagcgcc gagagatcgg
     1441 ccatgggcgt ctcgccaaac gagggatcca agccgttatg ccggagccgg acgcattctc
     1501 ttacgtagtc cgggtggttt cggagatcac cgagtcgaat gggtcgagct ctatggcgac
     1561 ggtatgcggt gccagcctct cgcttatgga cgccggcgtg cccatcaaag cacctgtggc
     1621 cgggatcgcc atgggcctta tcaaggaggg tgagcgcttc gtggtgctct ccgacatcat
     1681 gggggatgaa gatcatctcg gtgatatgga ctttaaggtg gcgggatcgg cgaagggcat
     1741 cacagcgcta cagatggaca taaagattga gggcattact cgggagatca tgggggtggc
     1801 cttgaaacaa gccaaagagg gccggctgca cgtcctcgat gaaatgaacg ccgtcattgc
     1861 caagccacgg caggagatgt cggagtatgc accccgtatc atcaccttaa agatccatcc
     1921 cgacaagatc cgggatgtca tcggcaaggg cggggcgacg atacgggcga tcacggaaca
     1981 gacaggcgcc acgattgaca tctccgacga tggtacggtg aagatcgcct ctaccaacaa
     2041 tgcggccggc caggaggcat gccggcgtgt cgagcagatc accgcggatg ttcaggtggg
     2101 catggtgtat gaagggcggg tagcgaaact gatggatttc ggcgcgtttg tcacgatcct
     2161 cccgggtaaa gatgggctgg ttcatatctc gcagatctcc gatgagcggg tcgagaatgt
     2221 cagcgacaaa ctaagggaag gtgacatcgt caaggtcaag gtattggaga tcgataagca
     2281 aggacgtata cgtctgagta tgaaggccgt caactcctca atctcttctc ggtgaatttg
     2341 acctgttagc tgcctaccac actaaaaaag gcgcttgtga ccctaagcgc ctctatcttg
     2401 aaagcaattt aaataattcc tatatcttat acttgcgccg gaacctttcc acccgccccg
     2461 ctgtatcaat aatcttctgt ttccccgtgt aaaacgggtg gcaggcagag catatgtcga
     2521 tatgtagatc tctagccaag atggagcgtg tcttgaatgt gttcccacaa ctacaggtaa
     2581 ccgtgatctc tttatatagg gggtgtatct ccgatttcat gtcagggttg ccttacaatc
     2641 actatgaaac tatttgtcag tagtgaatta tgcggccc
//
LOCUS       DASQSL010000391         1029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_126704, whole genome shotgun sequence.
ACCESSION   DASQSL010000391 DASQSL010000000
VERSION     DASQSL010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126704"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            46..>1029
                     /locus_tag="VE844_03935"
     CDS             46..>1029
                     /locus_tag="VE844_03935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013303422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZC00525.1"
                     /translation="MQAELLLSVQDLHVWFELRRWGFGRAGVVRAVDGVSFSLNQGEA
                     AAVVGESGCGKSTLARTILGLYHPVRGQVVFEGKRLDHLKSQGLRQYRSQVGYVQQDP
                     YGALPPFMTVQRILGEPLVVNKVRSRSERTRRIWKSLEEVKLSPVEEFLPKFPHMLSG
                     GQQQRLVIARAMVLQPRLLVADEPVSMLDASVRVEILELLRGLQRAYDLTLIYITHDL
                     STARYYVERILVMYAGRIVEQGEVEELLNNPLHPYTKALIAAIPDPTPENATTLQDVP
                     PGEPPSLVHPPAGCRFHPRCPAFIKGLCDVKEPPAFEPRSRHLVACWLYQGE"
BASE COUNT          211 a          278 c          324 g          216 t
ORIGIN      
        1 gggtcaagtg ctggctttat cctgcggttg aggacaaagg tggtcatgca agctgaactt
       61 ctcctttcgg tccaggacct gcacgtatgg tttgagctga ggcgctgggg atttggccgg
      121 gctggcgtcg tacgggcggt agatggtgtg agctttagcc tgaatcaagg agaggcggcc
      181 gccgtggtgg gagagagcgg ctgcggcaag tccaccttag ccaggactat cctgggactg
      241 taccacccgg tccggggtca ggtggtcttc gagggcaagc gcctggacca cttgaagtcc
      301 caaggattgc ggcagtacag gtcccaggtg ggttacgtac aacaggaccc ttacggagcg
      361 ctgccgccat tcatgaccgt gcagcgcatc ctgggggagc cgctggtcgt taacaaggtc
      421 aggagccggt cggagagaac gcggcgtatt tggaagtccc tggaggaggt gaaactaagc
      481 ccggtggagg agttccttcc caaatttccc cacatgctca gtggggggca gcagcagcgc
      541 ttggtcattg cacgggctat ggtattgcag cccagattac tggtggctga tgagccggtg
      601 tccatgctag atgcatcggt gcgggtagag atactggaat tgctacgagg cctgcaacgg
      661 gcctacgacc tcaccctgat ctacataacc catgaccttt caacagcacg gtactatgtg
      721 gagcgtattt tggtcatgta cgcgggcaga attgtggaac agggcgaggt ggaggaactg
      781 ctgaacaatc ccctccaccc atataccaaa gcccttattg ctgctattcc agaccccacc
      841 ccggaaaacg ctactacttt gcaagatgtc ccgccaggag aacctccaag tctggtccat
      901 cccccagccg ggtgcaggtt ccatccccgg tgtcccgcct tcataaaagg actttgcgac
      961 gtcaaggaac ctccggcctt tgagcctcgg tcacggcatc tggtggcatg ctggctgtac
     1021 cagggtgag
//
LOCUS       DASQSL010000392         1366 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_57925, whole genome shotgun sequence.
ACCESSION   DASQSL010000392 DASQSL010000000
VERSION     DASQSL010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1366
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57925"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(13..264)
                     /locus_tag="VE844_03940"
     CDS             complement(13..264)
                     /locus_tag="VE844_03940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006275802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0175 family protein"
                     /protein_id="HZC00526.1"
                     /translation="MTQVVIEFDPGALSALRKGPKEFAAEVKTAAVVQWYAEGRVSQS
                     KAAEILGISRAAFLEELFRRKISACQVTIEELLGEIRGV"
     gene            728..>1366
                     /locus_tag="VE844_03945"
     CDS             728..>1366
                     /locus_tag="VE844_03945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00527.1"
                     /translation="MREQLNSMPVGCSVPEPQGERVTICVPHEHPLLQLKDALDWAAI
                     TAVMVKHWREAGRNVDGGVGQPWPVGLYVPVLVLMRVQHLDTRAMERYLAYDAAARVF
                     LGWTSDPKPWVRDHSNIARAEASLGTEGWREVDELIVKHAVEWGFGDPRILSSDTTVQ
                     EPQIGYPNEPGILRGVAQRVHRALKKLAKCGVEGIEAGLEKTKEIVRQVKHHH"
BASE COUNT          297 a          374 c          402 g          293 t
ORIGIN      
        1 gacgaagcgg ggtcaaacac cgcgaatttc cccgagcaac tcctcgatgg tcacctggca
       61 cgcggagatc ttgcggcgaa acaactcctc caggaatgcc gcacggctga tgcccagtat
      121 ctccgcagct ttcgattgcg aaacccgacc ttctgcatac cactgaacga cggcggcggt
      181 ttttacctcg gctgcaaact ccttcggtcc cttgcgcagc gccgatagtg cccccggatc
      241 gaactcgata acgacttggg tcataaccat ttctccttaa aaaccaaacg atttcttccg
      301 cgctagcgcc ccttccaccc accgtttctc gtctgcgtgc tttggataaa gcgcggccaa
      361 gacctgcgcc agacgccaga atttcgggtc cctgctagta gtaagctggg ttgaggaaag
      421 aaatccagca aaatcttgtc aacggggaaa tagctgggtt tgccaaccca gcctacggcc
      481 ctacttgctg atcaccgctc cgacctgctg gttaaagtag cgtagggtca tttgcgaccc
      541 actttactat ttctctttct ctcttggcag ccctgcgtcc acgctatata gagcgtgtcg
      601 cagaaataga tgatcgcggg cacgcatttc taagtgaaag gagcagttca gccacctagg
      661 ggttgaaagc ttcccttctt tactgatact tcctgagtga tgaatgcgca aataatagga
      721 agccatcatg agagagcaac tgaattctat gcctgtgggt tgctcagtgc cagagccgca
      781 gggcgagagg gtgacgatct gtgtccctca cgaacatccg ctgctgcaac tcaaagacgc
      841 gctcgattgg gcagcgatta ccgcggtcat ggtcaagcac tggcgggaag ccgggagaaa
      901 tgtggacggt ggagttgggc aaccgtggcc ggtcgggtta tatgtgcctg tgttggtgtt
      961 gatgcgggtg cagcatctgg acacgcgcgc gatggagcga tacctcgcct acgatgcggc
     1021 agcgcgagtc tttcttggct ggacgagtga tccgaagccg tgggtgcggg atcactccaa
     1081 cattgcacgt gctgaggctt ctctggggac agagggttgg cgggaagtcg acgagttgat
     1141 tgtcaagcac gcggtggaat ggggctttgg cgacccgcgc atcttgtctt cggatacgac
     1201 ggtgcaggag ccccagatcg gctatccgaa cgaaccgggt atcctgcgtg gagtggcgca
     1261 acgggtccac cgcgcgctca agaaactggc taagtgcggg gtggagggta tcgaggcggg
     1321 ccttgagaag accaaagaga tcgtccgcca ggtcaaacat catcac
//
LOCUS       DASQSL010000393         3426 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_126730, whole genome shotgun sequence.
ACCESSION   DASQSL010000393 DASQSL010000000
VERSION     DASQSL010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3426
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126730"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..882)
                     /gene="rpsB"
                     /locus_tag="VE844_03950"
     CDS             complement(<1..882)
                     /gene="rpsB"
                     /locus_tag="VE844_03950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HZC00528.1"
                     /translation="MAEVSMRQMLEAGVHFGHQRRFWHPKMAPYIFGERNKIHIVNLE
                     KTLPLFNEAMNFLSKMAARKGTILFVGTKRAAQESVYTEAIRCGMPYVNRRWLGGMLT
                     NFRTIKRSLDRLQELQTMQQDGRLDRISKKEALTYRRELGKLEQSLGGIQQMSGLPDA
                     LVVIDVGHERIAIAEARKLGIPIVAVVDTNNSPEGIDYPIPGNDDANRAIQLYLKNAA
                     DAIAEGRISIPHELLTAADEFVEIDEDGEPVLKQAVQATERPVSTKKREAGKRATSKT
                     KVITPKTGMAKAHQEESS"
     gene            1044..1874
                     /gene="map"
                     /locus_tag="VE844_03955"
     CDS             1044..1874
                     /gene="map"
                     /locus_tag="VE844_03955"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018953114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HZC00529.1"
                     /translation="MPVSIKTPEEIDQMRTAGRLAAEVLTMIRPHVVAGVTTEELDRI
                     CHDYIVNTQCAIPAPLNYRGFPKSICTSVNHVVCHGIPGDKKLKEGDIINIDVTVIKH
                     GYHGDTSRMFFVGEPAIRARRLVEVCYECLQIGIDQVRPGAQLGDLGYAIQRHAETHG
                     FSVVREYCGHGIGSQFHEEPQVLHYGKPGTGLKLEPGMIFTIEPMINAGKRHVKLLPD
                     QWTVVTKDRSLSAQWEHTVLVTDTGVEVLTADEETNRRSAIDYRLAGPATIRSRRPAS
                     "
     gene            1831..>3426
                     /gene="glnD"
                     /locus_tag="VE844_03960"
     CDS             1831..>3426
                     /gene="glnD"
                     /locus_tag="VE844_03960"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: protein motif:HMM:TIGR01693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0018177 - protein uridylylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HZC00530.1"
                     /translation="MQDQQLFDREGLLHSLKAGQPPVVVYKGALARGDADLKERFARG
                     EPVKRLVAARAWLIDQVLRAAWETYGLSAKGLALAAVGGYGRGELHPGSDIDITLLID
                     PELEAGLHPRLESFLALLWDIGLEPGYSVRTLFQCQEQAAADVTIVTNLMESRLLAGE
                     ASLFEAMRKATGPQFIWPARQFFEAKLKEQTARHHKFHHTAHNLEPNIKEGPGGLRDI
                     QMIGWVAQRHFEPGPLHALVHHGFLTEDEYRTLDAGRSLLWRIRFALHILTSRREDRL
                     LFDYQRSVAKQFGFTDGEGGQLGVERFMKLYYRTVMELGRLNEMLLQLFQEAILDQDH
                     AISIQPLNARFQVRNDYIEACHDRVFRHYPFALLEIFLLLQQHPEIKGVRASTIRLIR
                     DHRYIIDDRFRKELKHRSLFMEILRQPQGCSDALQRMHRYGVLDAYLPVFGAVAGLMQ
                     FDLFHVYTVDVHTLFVVKNMEQLGCPERERALPLYTRLMAQIPKPELLYLSGLFHDIA
                     KGRGSDHSELGAQFASEFCLQHGL"
BASE COUNT          712 a          995 c          942 g          777 t
ORIGIN      
        1 cgagctttcc tcctgatgag ccttagccat gcctgtcttg ggagtgatca ccttagtctt
       61 ggatgttgcc cgcttccctg cttcccgctt cttagtgctc accggccttt cagtcgcttg
      121 caccgcctgt ttcaggacgg gttcgccatc ctcgtcgatc tcgacaaact catcggctgc
      181 tgtcagcagt tcgtgcggga tagagatacg gccttctgca atagcatccg ctgcattctt
      241 gagataaagc tggatggcgc gattggcatc gtcattgccc ggaataggat agtcgatccc
      301 ttcggggctg ttattggtgt ccaccaccgc tacgatgggg atgccgagct ttcgagcctc
      361 agcgatggct atcctttcgt gtccgacatc gatcacgacc agcgcgtcgg gtaaacccga
      421 catctgctga attccaccca gactctgttc cagcttaccg agttcacgcc tgtaagttaa
      481 agcctctttt ttacttatac gatcgagacg gccatcctgc tgcatagttt gtaattcttg
      541 cagccggtcg agcgatcgct tgatggtccg gaagttggta agcataccac cgagccaacg
      601 ccggttgaca tagggcatgc cacagcggat ggcttctgtg tatacacttt cctgagcagc
      661 ccttttcgtg cccacgaaca agatcgtccc ttttctcgcc gccatcttgc tcagaaaatt
      721 catggcttca ttaaaaagag gaagggtctt ctcaaggttg acgatatgga tcttattgcg
      781 ctccccaaag atgtacgggg ccatcttggg atgccaaaaa cgccgctgat gaccaaaatg
      841 cacgccggct tcgagcatct ggcgcatact gacctctgcc atgtgataat actccaaata
      901 gtgacttcgc gttgaacctc cacccacctc gtgcgtcaaa ttcgtgggta atggttgtga
      961 tttgccaaat aagcgcaggc tttataccat agaaggttaa ttgcaacaat ccgtagtagg
     1021 gttataatta cctattccga cttatgcctg tatccataaa aacgcccgag gaaatcgacc
     1081 agatgcgcac cgccgggcgc ttggccgccg aagtgctcac tatgatccgg ccccacgtgg
     1141 tcgcaggcgt cacgacggag gagctggatc ggatctgtca tgattatatc gtcaataccc
     1201 aatgcgccat tccggccccg ttaaactacc gcgggttccc caaatcgatc tgcacctcgg
     1261 tcaatcacgt cgtctgccac gggatcccgg gagacaagaa actcaaggaa ggagacatca
     1321 tcaacattga tgtcaccgtt atcaagcatg gctatcatgg ggataccagc cgcatgttct
     1381 ttgtcggtga acccgctatt cgggcccggc gtctggtcga ggtgtgctat gaatgcttgc
     1441 agatcgggat cgaccaggtg aggcctggcg cgcaactggg cgacctcggc tacgccatcc
     1501 aacgtcacgc cgagacccat ggtttttcgg tcgtgcgcga gtattgcggt catggcatcg
     1561 gcagtcagtt ccatgaagaa ccgcaggtgc tccattatgg taaaccgggg acgggactta
     1621 agctcgagcc gggcatgatc ttcaccatcg agcctatgat caacgccggc aagcgccatg
     1681 tcaaactgtt acccgatcag tggacggtgg tgaccaagga ccgcagtctc tcggcccaat
     1741 gggaacacac cgtgctggtg accgataccg gggtcgaggt gctgactgcc gatgaagaga
     1801 cgaatagacg atcagcgata gactaccgcc ttgcaggacc agcaactatt cgatcgcgaa
     1861 ggcctgcttc atagccttaa agccggtcag ccgccggttg tggtttacaa gggcgctctg
     1921 gcgcgaggcg atgccgatct caaagagcgc tttgcccgag gtgagccggt taaacgcttg
     1981 gtcgcagcgc gcgcctggct catcgaccag gtgttgcgag cggcctggga gacctacggc
     2041 ctatcggcca agggcctggc cctggccgct gtgggcggct acgggcgggg agaattgcat
     2101 ccgggatccg atatcgatat cactctcctc atcgatccgg agctcgaggc cggcctccac
     2161 ccacggcttg agtccttttt agcgctgctt tgggatattg ggcttgagcc tgggtacagc
     2221 gtgcgtaccc tcttccaatg tcaggaacaa gccgccgcag acgtcaccat cgtcaccaac
     2281 ctcatggagt cgcgcttgtt ggccggggag gcgtcgcttt ttgaggccat gcgcaaagcc
     2341 acggggcctc aattcatctg gcctgcgcgc caattcttcg aggccaagct gaaagagcaa
     2401 accgcccgcc accataaatt tcaccacacc gcgcacaacc tcgagcccaa tatcaaagag
     2461 ggccccggcg gcttaaggga cattcagatg atcggctggg tggcgcagcg gcactttgaa
     2521 ccgggcccgc tgcacgctct ggtgcaccac ggttttctga ccgaggacga ataccggacc
     2581 ctcgatgccg gacggtcgct gctctggcgt atccgttttg cgctgcatat tctgacgagc
     2641 cgccgggaag atcgcttgct gttcgattac cagcgcagtg tggccaagca attcggcttt
     2701 accgacggtg agggcggaca gttgggcgtc gagcggttta tgaagcttta ttaccggacg
     2761 gtgatggaat taggccggct caacgagatg ctgttacagt tattccagga agctatcctg
     2821 gatcaggacc atgccatcag catccaaccc ttaaatgccc gtttccaggt acgtaacgac
     2881 tatatcgagg cctgtcatga tcgcgtgttt aggcattatc ccttcgccct cctcgagatc
     2941 ttcttgttac tgcagcaaca ccctgagatc aaaggcgtgc gggccagcac catccgcttg
     3001 atccgcgatc accgttatat tatcgacgat aggttccgca aggagctcaa gcaccgcagc
     3061 ctgtttatgg agatcctgcg ccaaccccaa gggtgtagcg atgcgctcca gcgaatgcac
     3121 cgctacggcg tgctcgatgc ctatctgccg gtctttggcg cggtcgcggg actgatgcag
     3181 tttgacctct tccatgtcta tacggtcgat gtgcatacct tgtttgtggt gaagaacatg
     3241 gagcagctgg ggtgccccga gcgggaaagg gcgctgcccc tatatacccg ccttatggcc
     3301 cagatcccaa aacccgagct gctctatctc tcgggtctgt tccacgacat cgccaagggc
     3361 cgcgggagcg atcactccga gctcggggcc caattcgcta gtgaattctg cttacagcac
     3421 gggctc
//
LOCUS       DASQSL010000394         1163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_180842, whole genome shotgun sequence.
ACCESSION   DASQSL010000394 DASQSL010000000
VERSION     DASQSL010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180842"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..209
                     /locus_tag="VE844_03965"
     CDS             <1..209
                     /locus_tag="VE844_03965"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HZC00531.1"
                     /translation="GLQPVYFLSSSGLNCLLRTRDSAQTTATQLHLAGLANRAIAHPL
                     QVSQLLDQFNTYPTVTHALPAIID"
     gene            complement(253..597)
                     /locus_tag="VE844_03970"
     CDS             complement(253..597)
                     /locus_tag="VE844_03970"
                     /inference="COORDINATES: protein motif:HMM:NF024752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC00532.1"
                     /translation="MSSSRVPWRRSCLDLRSDPPGSRHDTYCLGDSELLVTLDPNNWI
                     GDKGYVGNNMLTPIKKPACRDLLDWEKEFNKQINKIRYVIEQVIAISRPGESCTPTIA
                     DPLRRLCQPSQR"
     gene            complement(506..976)
                     /locus_tag="VE844_03975"
     CDS             complement(506..976)
                     /locus_tag="VE844_03975"
                     /inference="COORDINATES: protein motif:HMM:NF025000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC00533.1"
                     /translation="MYHTTGLSQERIVDLCVEIDGEATREERAWPPILGLFTSLVVTL
                     TYLRRNRVQTELAETYAVSQSTISRAVSAITPLLGKLLRKYVPTADELHDLTQYIVDG
                     TLLPCWSWTAHPELYSGKHKTTGLNVQFACTLAEILPGPPIRSPRKPARYLLPG"
BASE COUNT          254 a          327 c          313 g          269 t
ORIGIN      
        1 gtggattaca accggtgtat ttcttgagct ctagtgggct gaactgcctg ctgcgcaccc
       61 gcgacagtgc ccagaccacc gcaacacagc tgcacctagc aggcctggcc aaccgagcta
      121 tagcacaccc actacaagtc agccagctgc tggaccaatt caacacctac cccaccgtca
      181 cccacgccct ccccgcgata atcgactgaa cattgagggt tattcagcag attgcgtaaa
      241 aatgcaggcc gactaccgct gagatggttg acacaaacgt cgcaaggggt cggcgatagt
      301 cggtgtgcat gattcgccag gtcttgaaat ggcgatgacc tgttcaatca cgtatcgaat
      361 tttgttgatc tgcttgttga actctttctc ccagtccagg agatcgcgac atgccggctt
      421 cttgatggga gtgagcatgt tgttgccgac gtatcccttg tcgccgatcc agttgttggg
      481 atccagagtc acgaggagct ccgagtcacc caggcagtag gtatcgtgcc ggcttccggg
      541 gggatcggat cggaggtcca ggcaagatct ccgccagggt acacgcgaac tggacattca
      601 gtcctgtggt cttatgctta ccggaataca actctggatg agcggtccac gaccagcacg
      661 gaagcagcgt gccgtccacg atgtactgtg tcaggtcgtg gagttcgtca gcggttggca
      721 catattttct gagtagcttt cccaatagtg gcgtaatcgc cgagactgcg cggctgatcg
      781 ttgactggga caccgcatag gtttccgcca gctcagtctg gacccgatta cggcgcaaat
      841 atgtcagcgt caccaccaga gatgtgaaca gtcccaggat gggtggccag gctcgctcct
      901 ctcttgttgc ttcaccatct atctccacgc acagatccac gatgcgttct tgggacagtc
      961 cggtggtatg atacatgcag gcggtccgtt tctgcgagtt tgagcgtggt actcaaattc
     1021 tctcagtaaa cgggccgccg tttatgtcga cacgccgcat gaaatgtcga ctaatccccc
     1081 tgaataaccc tcagtgatct ccagttgcgt gcgtgacacg gttcataaca caaaactgtt
     1141 agcatgagtg cgtgacgcaa tct
//
LOCUS       DASQSL010000395         1000 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_140278, whole genome shotgun sequence.
ACCESSION   DASQSL010000395 DASQSL010000000
VERSION     DASQSL010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140278"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..490)
                     /locus_tag="VE844_03980"
     CDS             complement(<1..490)
                     /locus_tag="VE844_03980"
                     /inference="COORDINATES: protein motif:HMM:NF017373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small-conductance mechanosensitive ion channel"
                     /protein_id="HZC00534.1"
                     /translation="MQELLNGIQASFIGVIGAIVTKVLRAVQFNEVAERAEIDTFIEK
                     AGVKSGPSAVVGGIVRWAVYLVFFLAAFTALGLPQVSTLINSLIAYLPKVVLAVIVLL
                     VGALAGKVMAGIVRGTLGSMGMGNPDLFANVARFAIIAFAVIAALDILEIAPTVVGAL
                     WIA"
     gene            complement(551..>1000)
                     /locus_tag="VE844_03985"
     CDS             complement(551..>1000)
                     /locus_tag="VE844_03985"
                     /inference="COORDINATES: protein motif:HMM:NF021098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YsnF/AvaK domain-containing protein"
                     /protein_id="HZC00535.1"
                     /translation="IGEEHQHPAGEMREEHQHPVTPQGDVTISRHEEELQIGKREVEY
                     GRVRLRKWVETEPVSEEVELRRETAFVEREPVNRPASGAAIGEEEVEMSLHREEPVVS
                     KETVEREQITVHPEEEIKEETVHGEVRREHVEVEDDSDDAEERRRRR"
BASE COUNT          193 a          334 c          244 g          229 t
ORIGIN      
        1 aagcaatcca cagagcaccg acgacagtgg gagcaatctc caagatgtcc agtgcggcga
       61 tgacagcaaa ggcaataatg gcaaagcgtg ccacgttggc gaacaggtcc ggattgccca
      121 ttcccatgga tcccaaggtg ccccggacaa ttccggccat gaccttacca gcgagtgcgc
      181 ccactagcaa cactatgacc gctagcacca ccttaggcag ataggcaatc aggctgttga
      241 tcagcgtcga cacctgggga agccccaggg cggtgaacgc tgccaggaag aagaccaggt
      301 agaccgccca cctcacaatg cctccgacca ctgccgaagg ccctgacttg acacccgctt
      361 tttctatgaa tgtatctatc tcggcgcgct cggctacttc gttaaactgg actgcgcgca
      421 gtactttggt gacaatcgcc ccgatgacgc cgataaatga agcctggatt ccgttcagca
      481 actcctgcat gaggtcctcc tccagtaatg agatcgggcg gggctttagg ccccgcccac
      541 tctgctagcc ttaccggcgt ctgcgtcgct cttcagcgtc gtcagaatcg tcctccacct
      601 ccacatgttc ccggcggact tcaccgtgta ctgtctcctc cttgatttct tcctctgggt
      661 gtacagtgat ttgctccctc tccaccgttt ccttgctaac tactggttcc tcccggtgga
      721 gcgacatctc cacctcctct tccccaattg ctgcccctga ggcgggccga tttactggct
      781 cacgctccac aaaggcagtc tcccggcgta gctccacttc ctcagagacc ggttccgtct
      841 ccacccactt gcggagcctg acccggccat actccacttc tcgtttgcca atctggagtt
      901 cttcctcgtg ccggctgatg gtcacatcgc cttggggagt tacgggatgc tggtgctctt
      961 cccgcatctc acctgcagga tgttgatgtt cctctcctat
//
LOCUS       DASQSL010000396         1639 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_3392, whole genome shotgun sequence.
ACCESSION   DASQSL010000396 DASQSL010000000
VERSION     DASQSL010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1639
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3392"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..333)
                     /locus_tag="VE844_03990"
     CDS             complement(<1..333)
                     /locus_tag="VE844_03990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018234088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase subunit E"
                     /protein_id="HZC00536.1"
                     /translation="MEHKATLSEHTRAVIDAWVAKYPPDRKQSAVLAALTEVQHENGG
                     YLTTALMDRIAAYLDMPPIAVYEAASFYSMFELKPVGRHSVSVCTNISCMLRGAEELV
                     QHIEKKLKI"
     gene            complement(333..1586)
                     /locus_tag="VE844_03995"
     CDS             complement(333..1586)
                     /locus_tag="VE844_03995"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012982124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HZC00537.1"
                     /translation="MPEIRNMTLNFGPQHPAAHGVLRLVLEMDGEVIERADPHIGLLH
                     RATEKLAESKPYNQSIGYMDRLDYVSMMCNEHAYVLAIERLLGIEPPIRAQYIRVLFD
                     EITRILNHLMWLGAHGLDIGAMTVFLYCFREREDLMDCYEAVSGTRMHATYYRPGGVY
                     RDLPATMPHYQPSQWRTQNEVERLNRARQGSLLDFIEDFANRFPACVDEYETLLTDNR
                     IWKQRTVGIGVVSPERALQLGFSGPLLRGSGVEWDLRKKQPYEVYDRLEFDIPVGVNG
                     DCYDRYLVRIEEMRQSAGIIQHCVEWLKNNPGPVIIDDHKIVPPRREEMKGDMESLIH
                     HFKLFTEGYCVPEGEVYAAVEHPKGEFGIYLISDGANKPYRLKIRAPGFAHLSSMDEM
                     VRGHMLADVVAIIGSQDIVFGEIDR"
BASE COUNT          346 a          486 c          454 g          353 t
ORIGIN      
        1 tatcttgagt ttcttctcga tgtgctggac caattcctcg gcgccgcgga gcatgcagga
       61 gatattggtg cagaccgaga cactgtgccg gccgaccggc ttgagctcaa acatcgagta
      121 aaaactcgcc gcttcataga ccgcaatcgg tggcatatcg aggtaggcgg cgattctatc
      181 cataagcgcc gtggtcaaat acccgccgtt ttcatgctgg acctcggtga gcgctgccaa
      241 taccgcggac tgcttgcggt cgggtggata tttcgccacc caggcatcga tcactgcgcg
      301 ggtgtgctcg gaaagtgttg ccttatgctc cattatcgat cgatttcgcc gaatacaatg
      361 tcctggctgc cgatgatagc caccacatcg gccagcatat gtccccgcac catctcgtcc
      421 atagacgaga gatgggcaaa cccgggcgca cggatcttga gccggtaggg tttgttggct
      481 ccatccgaga taagatagat cccaaactcg cccttggggt gctccacggc ggcatagacc
      541 tcgccctccg gcacgcaata gccctcggta aataatttga aatgatggat cagcgattcc
      601 atgtcgccct tcatctcttc acggcgggga ggtacgatct tgtgatcatc gatgatcacc
      661 ggtcccgggt tgttcttgag ccactcgaca cagtgctgga tgatacctgc cgattggcgc
      721 atctcctcga tccggaccag atagcgatcg tagcaatcgc cgtttacccc caccgggata
      781 tcgaattcca gccggtcgta cacctcatag ggttgcttct tgcgcagatc ccattctacc
      841 ccggagccgc gcaacagggg accgctaaac cctaattgaa gcgcgcgttc gggcgatacc
      901 acaccgatcc caaccgtgcg ctgtttccag atccggttat cggtgagcag cgtttcatac
      961 tcgtccacgc acgcgggaaa acggttggca aaatcctcga tgaaatcgag cagcgaccct
     1021 tgacgcgcgc ggttcaagcg ctctacctcg ttttgagtgc gccattgcga gggctgatag
     1081 tgcggcatgg tagcgggcag atcgcggtat acaccgcccg gccggtaata ggtcgcatgc
     1141 atgcgggtcc cggagacggc ctcatagcaa tccatgaggt cttcgcgttc ccggaaacaa
     1201 tacaggaata ccgtcatagc accgatatcc aagccatgcg cgcccagcca catcaggtga
     1261 tttaagatac gggtgatctc gtcgaacagc acccggatat actgagcccg gatcggcggt
     1321 tcaatcccga gcaggcgctc gatggccagt acatacgcgt gctcattgca catcatggac
     1381 acgtaatcga gccgatccat ataaccgatg ctctggttat agggcttgct ctcggccagc
     1441 ttttcggtgg cccggtgcaa gagcccaata tggggatcgg cccgctcgat gacctcgcca
     1501 tccatctcca gcaccagccg cagcacacca tgggcggccg gatgctgggg gccgaaattc
     1561 agggtcatat tgcgtatttc aggcatcgtg gctattcctg agcaagagta gggctagtct
     1621 cctggctctc gcggcggat
//
LOCUS       DASQSL010000397         1170 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_29133, whole genome shotgun sequence.
ACCESSION   DASQSL010000397 DASQSL010000000
VERSION     DASQSL010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29133"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            45..743
                     /locus_tag="VE844_04000"
     CDS             45..743
                     /locus_tag="VE844_04000"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HZC00538.1"
                     /translation="MADKGYVNSDLLWSPQELQARLGDAELRIVDVRPTHTLMQQGWI
                     PGALHFDLFGISLNDTAPEPLQAFMWTIEHLFESRGVNLNTPVVFYEDIAGMRAARGF
                     WFLEYLGHTDVHVLDGGFNAWKAAGLPISHDMQAPKATAFRSHPRPELHWSADDLHAH
                     LRDADLAIIDTRSDDEYLGKSVRAARGGTVPGAIHLEWTNNLDAQGAFKTGDELRAMY
                     EAKGITRDKACAPF"
     gene            complement(881..>1170)
                     /locus_tag="VE844_04005"
     CDS             complement(881..>1170)
                     /locus_tag="VE844_04005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00539.1"
                     /translation="ARRCSKWSWVEACLTGPQLESVLLHDTTSVERHFRQAQTRVATR
                     EGHRHKPPRQGAQAEIDVLGKYCFLLYTCRVLGQDHPAPALAPTTSLLPMH"
BASE COUNT          232 a          336 c          356 g          246 t
ORIGIN      
        1 ttcgttgcgt aaatcactcg tcggcaagga ggtgagcacg tcatatggct gataaaggct
       61 atgtcaactc tgacttgtta tggtcgcctc aagagctgca ggcgcgtctg ggcgatgctg
      121 agctgcgcat cgtcgatgtg cggccgaccc acaccctgat gcaacagggc tggattccgg
      181 gagcgctcca cttcgatctc ttcggcatca gcctcaacga tactgcaccg gagccgctgc
      241 aggccttcat gtggaccatc gaacacctgt tcgagtcgcg gggggtcaat ctcaacacgc
      301 cggttgtatt ctatgaggac atcgccggca tgcgtgcggc cagggggttc tggttcctcg
      361 aatacctcgg ccacaccgat gtgcatgttc tggatggcgg gttcaacgcg tggaaggctg
      421 cggggttgcc tatttcgcat gacatgcagg cccccaaagc cacggccttc cgcagccacc
      481 cacgtcccga gctgcattgg agcgccgacg atctgcatgc acatttgcgc gatgcagatc
      541 tggccatcat cgacacgcgt tcagatgacg agtacctagg caagagtgtc cgggccgccc
      601 gggggggaac ggtcccaggg gccattcacc tggagtggac caataacctg gatgcccaag
      661 gcgcttttaa gacaggcgac gaacttcggg ccatgtatga agcgaaaggc attacgcgcg
      721 acaaggcatg cgccccattc tgacaaggcg gctatcgctc ttcccatgcc tacctggcgt
      781 tgcgtctcct gggatatccc aggctacaca acttcatcgg gtcatggaag gagtgggggg
      841 atcggctgga tttgccgatc gaacagccta cagcattagc ctagtgcatc ggcaacagag
      901 atgttgtggg tgcaagtgct ggggctgggt gatcctgccc cagcactcgg catgtgtata
      961 agagaaagca atatttgccc agaacgtcaa tttccgcctg ggctccctga cgcgggggct
     1021 tgtgccggtg accctctcgc gtggccacac gggtctgagc ctgtctgaaa tgccgttcaa
     1081 cgctggtggt gtcgtgcaag agtacgcttt caagctgcgg gccggtgagg cacgcttcaa
     1141 cccatgacca ttttgagcac cttctggcag
//
LOCUS       DASQSL010000398         1921 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_126745, whole genome shotgun sequence.
ACCESSION   DASQSL010000398 DASQSL010000000
VERSION     DASQSL010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1921
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126745"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..659
                     /locus_tag="VE844_04010"
     CDS             <1..659
                     /locus_tag="VE844_04010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZC00540.1"
                     /translation="IGQKGGSGKTTLATALAVRAVQDGKSVALIDLDPQGTATKWAEL
                     RGQETPAIVSCQIFMLPKILAKANEGGADIAIIDTPGKIEQAAVEAAKVADLALIPLR
                     ATAFDLTALTELRNLLAIGGDPLSYVVINAAPPQGRRHEDAKAVIEGMHSLKVAPVHL
                     CQRNAYADATISGLTATEYEPEGKAAREIDALYSLTISVSQSLKSKKSHGKVKLATAS
                     "
     gene            628..915
                     /locus_tag="VE844_04015"
     CDS             628..915
                     /locus_tag="VE844_04015"
                     /inference="COORDINATES: protein motif:HMM:NF042903.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HZC00541.1"
                     /translation="MAKSSLQQLLNEAKSSAPTKASAKPATVPVEGEVAPKRITHKPG
                     EVNISAYFPAEVKSALRLVQAKTGKNVKQCLAEALADYFRKHNIPVTVPLE"
     gene            934..>1921
                     /locus_tag="VE844_04020"
     CDS             934..>1921
                     /locus_tag="VE844_04020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein"
                     /protein_id="HZC00542.1"
                     /translation="MTTKAAAMKDKPVLPPKEVDFQAKQLDLFRSFLCNSEDERDRLS
                     NTFDLWDSVPRYSVSRQAMDKMRKAGDFPQLMNIPFHYRGREFKAIIQPAWIQDKDNN
                     VKGYYPSANEELVEDALRKIAAEQNHGYFDKPNYRSGVVFTLHMLREELKKRGHTRSY
                     QEIVLSLKILARSSIEIATTDGKDGEGFTVNPYFSGLSAVSKTRLIDDPQAKWIVQFH
                     PLVTQAIDALTYRQFNYAQMMSHCTQLARWLYKQLSLKFTFASPMVSFEMRFSTVKRD
                     SALLEGYKQQRQAVVALDTAFEELKKGGVLALVKKSEIRGARSKLENVVYTLT"
BASE COUNT          480 a          549 c          498 g          394 t
ORIGIN      
        1 tgatcggcca aaagggcggt tctggcaaga ccacactggc aacggctctc gccgtccgcg
       61 ccgttcagga cggtaaaagc gtcgccctga tcgacctcga cccccaggga acagccacga
      121 aatgggcgga acttcgtgga caggaaaccc ccgccatcgt ttcgtgccag atttttatgc
      181 tcccgaagat cctagcgaaa gcaaatgagg gtggggcgga catcgccatc atcgatacgc
      241 cgggtaagat cgaacaggcc gccgttgaag ccgccaaagt cgcggacttg gccctgattc
      301 ccctcagggc aacggccttt gatctgactg cccttacaga actcaggaat ctcctcgcta
      361 tcgggggcga tccattgtct tatgtcgtca tcaacgccgc cccgccccag ggccgccgcc
      421 atgaggatgc aaaagccgta atcgagggta tgcattccct caaggtagct cccgttcacc
      481 tttgccagcg gaacgcctac gctgatgcca ccatcagcgg cctgacggcg acggaatacg
      541 agcccgaagg gaaggctgca cgggaaatag acgcccttta ttctctcaca atctcagtct
      601 ctcaatctct caagagcaag aaatctcatg gcaaagtcaa gcttgcaaca gcttcttaat
      661 gaggccaaat cgtccgcgcc gaccaaagca tccgcgaagc cggcaacggt tccagttgaa
      721 ggagaagtcg ccccaaagcg catcacccat aagccgggtg aggtcaacat atccgcctat
      781 tttccggcag aggttaaatc tgccttacgc cttgttcagg ccaaaaccgg caagaacgtc
      841 aaacagtgcc ttgccgaagc cctcgcggat tacttccgca agcataacat tcccgtgacc
      901 gtaccgctgg aataggatag ggaaggggag agcatgacga ccaaagccgc cgctatgaag
      961 gacaagcctg ttcttccgcc gaaagaagtg gattttcagg ccaagcagct ggatttgttc
     1021 cgttccttct tgtgcaacag cgaagacgag cgtgaccggc tttccaatac cttcgatctt
     1081 tgggatagtg tgccgcgcta ttcagtgtca cgtcaggcga tggacaaaat gcggaaggca
     1141 ggtgacttcc cgcaattgat gaatataccg ttccactatc gcggacgcga gttcaaggcc
     1201 attattcagc cagcttggat tcaggataag gacaataacg taaagggcta ctatccaagc
     1261 gccaacgagg aacttgtcga ggacgccttg cgcaagattg ccgccgagca gaatcacggc
     1321 tatttcgaca aacccaacta ccgcagcggg gttgtgttta cgctgcacat gctacgcgag
     1381 gaattgaaga agcgcgggca tacccgatcc tatcaggaaa tcgttttaag cctgaaaatc
     1441 ctcgcgcgaa gttccatcga gattgccact acagacggca aggacggcga aggcttcacc
     1501 gtcaaccctt atttttccgg cctatcggcg gtatcgaaaa ccaggcttat cgatgatcca
     1561 caagcaaaat ggatcgtcca gtttcatccc ttggttacgc aagccataga tgccctgact
     1621 tatcggcaat tcaactatgc tcagatgatg agtcactgca cgcagcttgc gcgttggctg
     1681 tataagcaat tgtctctcaa gttcactttt gccagcccca tggtgtcctt tgaaatgcgc
     1741 ttcagcaccg ttaaacgcga tagcgctttg ctggagggct acaaacagca acgccaggcc
     1801 gtcgtcgcgc ttgataccgc tttcgaggag ttgaagaagg gcggtgtact ggctctggtc
     1861 aaaaaaagcg agatacgcgg tgcccgctcc aaactggaaa acgtagttta caccctcacc
     1921 g
//
LOCUS       DASQSL010000399         1938 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_126760, whole genome shotgun sequence.
ACCESSION   DASQSL010000399 DASQSL010000000
VERSION     DASQSL010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1938)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1938)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1938
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126760"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            382..1023
                     /locus_tag="VE844_04025"
     CDS             382..1023
                     /locus_tag="VE844_04025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019458875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding negative transcriptional regulator"
                     /protein_id="HZC00543.1"
                     /translation="MYLPQHFEETRIEELHRLITEYPLGALVLNGPNGLDANHLPFEL
                     LRNAGERGHLLAHVARANPLWQEAKDGDEALVIFRAANAYISPNWYPSKHEFHRQVPT
                     WNYQAVHVHGRMRIRDDEQFIRGVVARLTHTNEARTGSEKPWKMTDASKEYIDQMLAA
                     IVGIEIEITKMIGKWKLSQNREERDRVNAAEELRKRGDQITSTAMLNAGAHKG"
     gene            1188..1769
                     /locus_tag="VE844_04030"
     CDS             1188..1769
                     /locus_tag="VE844_04030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00544.1"
                     /translation="MGKVLALLLIILLALASGAGYLFLTEKITAGERQIADGQRQLEQ
                     GQSALEEGKAKLEAGKAKLEAGKRELAEGKKEYKQAKDNPFVVLADKLLQGGKGFKEA
                     REQIAKGDKQVAKGDKQVATGEGQVTEGERRLDAGELELRRGREQLRLAKGARVACAV
                     GAAFFASLSIVLGFCWRRSLARLFMHTDAKEAR"
BASE COUNT          470 a          519 c          585 g          364 t
ORIGIN      
        1 ttcgttatgc gcgcgtgctg tggctacacc tcgaccaaat atttgatccc cgatagttca
       61 aaagtgtcac caaaagcgac gatgacccga cctcctttac ctcagtgggg agtgaagccg
      121 actcatctca acccatcctc aggccatcgc ctgccacggg ccatgatgcc gacatgcgtg
      181 acgtatcaga cctggatttg ggctatgatg atgaaaaatt ccgtctcagc cgccccaacg
      241 ggggatgaga cccacctgtc gcgcagggct cttgagaggg ttacgtggaa acaattccac
      301 atattcaata gttgggccgg caccacctca gcggctcagt ggcctcacca tcgttgcgtc
      361 ggaacatgtg aagggaacct tatgtacctc cctcagcact tcgaagaaac gcgcatcgaa
      421 gagcttcatc gcctcatcac ggagtacccc cttggcgcac tcgtcctcaa tgggccgaac
      481 gggctcgatg cgaatcatct gccctttgag ctcctccgga atgctggcga gcgcgggcac
      541 ctgctggccc acgtcgcgcg cgccaatccc ctgtggcagg aggccaaaga tggcgacgaa
      601 gcgctcgtca tcttccgtgc ggccaatgcc tacatctcac cgaactggta tccgagcaag
      661 cacgagtttc accggcaagt gccgacatgg aattaccagg ccgtccacgt ccacggcagg
      721 atgaggatcc gcgatgatga gcagttcata cgcggtgtcg tcgcacggct cacacacacc
      781 aacgaggccc gcactgggtc agagaagcct tggaagatga ccgatgcctc aaaggagtac
      841 atcgatcaaa tgctggcagc catcgtcggg attgagatcg agattacgaa gatgatcggc
      901 aagtggaagc tcagtcaaaa tcgagaagag cgagatcggg tgaacgcggc cgaagagctg
      961 cgcaagcgcg gcgaccagat cacgtccacg gccatgctca acgctggagc ccacaagggc
     1021 tgatgccgcc caacccgtcg cgacagctct gtcgtgagac cttgagcctt cacgagtcgg
     1081 cggaattccc cacgagcgta aaggacgtcg tgacgcgctt tggcgccatt agggcaaaat
     1141 ggcgtgtgaa tcaatggtta ggttcataaa atacagagag aaacatcatg ggcaaggtgc
     1201 ttgcgctgct gctcatcatt ctattggctc ttgcgtcggg ggccggctat ctgtttctca
     1261 ccgagaagat tactgccggg gaaaggcaaa tagccgatgg gcaaagacag cttgaacaag
     1321 gacagtccgc gctcgaggag ggcaaagcga agttggaggc cggcaaagcg aagttggagg
     1381 ccggcaagcg agagttggca gagggcaaga aggagtacaa gcaagctaaa gacaacccgt
     1441 tcgtggtatt agcggacaag ctgctgcaag gcggaaaggg cttcaaggag gcgcgcgagc
     1501 agatcgccaa aggagacaag caggttgcca aaggagacaa gcaggttgcc acaggagagg
     1561 gccaggttac cgagggggaa aggcgacttg atgccggcga gctggaactg cgccgaggga
     1621 gggaacagtt gaggttggcc aagggcgcac gcgttgcctg tgcggtcggg gcagcttttt
     1681 ttgcctcgct atcgattgtg ctcgggttct gttggaggcg atcactggcc cggctcttta
     1741 tgcatactga tgccaaagaa gcgcgatgag gtatgcgcgc ggtgaggcaa ttttgcgcgt
     1801 tatagcaatg cgatacgcgc ctcaattgat tgtctcacaa aacgaacgga tactgttggc
     1861 gaactcggaa gcgtcaaaat ttcgcctcgc atttcacttc tttgaaggca cttaggcttg
     1921 gaaaaagctc ggcggaaa
//
LOCUS       DASQSL010000400         1735 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_3420, whole genome shotgun sequence.
ACCESSION   DASQSL010000400 DASQSL010000000
VERSION     DASQSL010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1735
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3420"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..259
                     /locus_tag="VE844_04035"
     CDS             <1..259
                     /locus_tag="VE844_04035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00545.1"
                     /translation="PIVVDRTRQMRKTAIITEEVRLQFAMEAVDMHFSRCAALQEYIN
                     PTTLLNEALFVFAFFCATQRRGGYAVGPWLPVGGRLHSTRF"
     gene            complement(286..1575)
                     /locus_tag="VE844_04040"
     CDS             complement(286..1575)
                     /locus_tag="VE844_04040"
                     /inference="COORDINATES: protein motif:HMM:NF033540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS701 family transposase"
                     /protein_id="HZC00546.1"
                     /translation="MWPACRTAGDGFAIPQFTLDPSDVEGFMDELHGFHTAFRGCFAR
                     SEPREHFFHYMVGQFSDLERKSIEPMALQVEGGNVRAMQRGISEAVWDDVQMLRTYHR
                     LVDEDMGDPEGVVIFDESGFPKKGYNSVGVARQYCGTLGKVDKCQVGVFAAYASRHGY
                     ALVDKQLFLPEPWLTDAYARRRTRCQVPADRGFQTKPQFAAAMLRALRDEGVLPFKYV
                     VADCLYGNSPEFLDIVEEESPTISFVSIPADTRCWLPGPVMATKSYTSQGQRRTKRVV
                     AATAKEPLAVEAVAKSLHDCFWYRRHVSEGTKGPIEYEFTKRQVTLCRNGLPTKTVWL
                     VIKRTMGVPPSSWYYISNAPVSTRLPLFVWLSGLRWAIEQCFAEAKTELGMDQYEVRK
                     YPGWHHHMLTTMLAHFFLWHLQIRLGKKSTSSYGVTT"
BASE COUNT          377 a          512 c          477 g          369 t
ORIGIN      
        1 ccctatcgtg gtcgatcgta cacgacagat gcgcaaaact gccataatta ccgaggaagt
       61 gcgcctgcag tttgcaatgg aagctgtgga catgcacttc tcccgttgtg ccgccctgca
      121 ggaatatatt aaccctacaa cgttacttaa tgaggcgcta tttgtcttcg cctttttctg
      181 tgcgacacaa aggcgcggtg gttacgctgt tggaccctgg ctaccagttg gaggacgtct
      241 gcactcgaca aggttttgac gggcaatacc acctgtcgca ggctcctaag ttgtgacacc
      301 gtaagagctg gtgctttttt tccccaagcg tatctgcaga tgccagagga aaaagtgggc
      361 taacatggtg gtgagcatat gatgatgcca cccaggatat ttgcggactt catactggtc
      421 catgcccagt tcggttttcg cctctgcaaa gcattgttcg atggcccacc gcaggccact
      481 caaccagaca aacaggggta agcgcgtact cacaggggcg ttgctgatat agtaccaaga
      541 ggacgggggc acccccatgg tgcgtttgat cacgagccac acggttttgg tgggcaggcc
      601 attgcgacag agggtgacct gtcgcttggt aaactcatac tcgatgggcc cttttgtgcc
      661 ctccgagacg tgccgtcgat accagaagca atcgtggagg ctcttggcca cggcttcgac
      721 cgcaaggggc tccttggccg tggcggccac cacccgtttc gtccgcctct gcccttgaga
      781 ggtatacgac ttggtcgcca ttaccgggcc tgggagccaa cagcgagtat cggccggaat
      841 cgagacgaaa gagatggtgg gactctcttc ttcgacgatg tccagaaatt ctgggctatt
      901 gccatacaga caatcggcga cgacgtactt gaaaggcagc accccctcat cgcggagcgc
      961 ccgtaacatc gccgccgcga actggggctt ggtctgaaac ccgcggtcag cgggcacctg
     1021 acaccgggtg cgacggcgcg cgtaggcgtc ggtcaaccac ggctccggta ggaagagctg
     1081 cttgtccacc aaggcataac catgccggga cgcgtaggcg gcaaacaccc cgacctgaca
     1141 cttgtcgact ttccccaggg ttccacaata ctgccgcgcc acccccacgg agttatagcc
     1201 ctttttcgga aagcccgact catcgaagat caccaccccc tccgggtctc ccatgtcttc
     1261 atcgaccaga cgatggtacg tccggagcat ctgcacgtcg tcccagaccg cctcactgat
     1321 gccgcgctgc atcgcccgca cattcccgcc ctccacctgt agagccatgg gttcaatcga
     1381 tttgcgttcc agatcactga actggcccac catgtagtgg aagaaatgct ctcgtggctc
     1441 gcttcgcgca aagcaaccgc gaaaggcggt atgaaagccg tgcaattcgt ccataaagcc
     1501 ttcgacatca ctgggatcaa gcgtaaactg ggggatcgcg aagccgtccc cggcggtgcg
     1561 acacgctggc cacatcctct gcctcctggc tgttgactga tggtccggac gcagagtaca
     1621 tgccaaagag gctcatgtca acacgtaaac gtcgttgtag ggctacacgc cctggtacta
     1681 cagttgtcga gagttttgcc caagttaggt gagtttcata attacttgga aaaaa
//
LOCUS       DASQSL010000401         1358 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_193772, whole genome shotgun sequence.
ACCESSION   DASQSL010000401 DASQSL010000000
VERSION     DASQSL010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1358
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193772"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            70..1257
                     /locus_tag="VE844_04045"
     CDS             70..1257
                     /locus_tag="VE844_04045"
                     /inference="COORDINATES: protein motif:HMM:NF033550.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3 family transposase"
                     /protein_id="HZC00547.1"
                     /translation="MDVYGIEALLGLPEFRVVDQVIRPHELELHLERRDTYLVCPRCQ
                     GCCARIKAGRERCIRDLPILDRPVTLRLHLGRFKCPDCHHRPWERRETFGDRVKWTKR
                     LYDQVRQEFLHGCPCQELARRYGLSARTVFRWTFETSRGGRPRQRGRALGIDEYSRGK
                     GHRYNTIIVDLDSGRPITTLKGRRVKDVVAWFKSRPQAERDRVEVVGLDMSKSFFSAI
                     QEVFGDQVQVIDRFHVVQHAVSAVDTVLRSVQKQLELDEAKELKKLRRRWLKAANQLN
                     VDELIARANWRRRFPALREVIDWVQDLRTWFERKYDKPAREALLKLTERARESALEPL
                     QSVAGTLSRWFEPIVRYIRHRYTNGMTEGFNTKIKLIQRRAFGLRNEHNRKKRILADC
                     TRT"
BASE COUNT          319 a          334 c          406 g          299 t
ORIGIN      
        1 taattgacat gaacaggatt cctcccaacc ttctggaaac caatcgaccc agaaggagga
       61 accctgcgca tggatgtcta tggtatcgaa gccttgctcg gtctgccaga atttcgcgtt
      121 gtcgatcaag tcatccggcc ccacgagttg gaattgcact tggaacgacg cgacacgtac
      181 ctcgtttgtc cccgctgtca gggatgttgt gctcggatca aagcgggtcg agagcggtgt
      241 attcgtgatc tgcccatctt ggatcgcccc gtgactttaa ggctccacct gggccgcttt
      301 aagtgcccgg attgccacca tcggccctgg gagcgtagag agacgtttgg cgaccgggtg
      361 aaatggacca agcggcttta cgatcaagtg cgtcaggaat ttcttcacgg ttgcccatgt
      421 caagaactgg cgaggcgcta tggcctctcg gcgcgcacgg tgtttcgctg gacgtttgaa
      481 acaagccggg gcggacggcc aaggcagcgg ggtcgcgcct tagggattga tgaatactcc
      541 aggggcaagg ggcatcgcta caatacgatc atcgtggact tagacagtgg tcggccaatc
      601 accaccttga aaggccgacg ggttaaggac gtggtggcgt ggttcaaaag tcgcccgcaa
      661 gcggaacggg accgagtcga agtcgtaggg ttggatatgt cgaagtcgtt tttttcggcc
      721 atccaggaag tttttggcga tcaggtccaa gttattgacc ggttccatgt ggtccagcac
      781 gccgtgagtg cggtcgatac cgtgttgcgg tcggtgcaaa agcaacttga gctggacgag
      841 gcgaaagagc tgaaaaaact gcgcagacgc tggctgaaag cagctaatca actcaatgtt
      901 gacgagttga tcgcgcgggc gaattggcgt cggcgttttc ccgcgctccg cgaagtcatt
      961 gattgggtgc aggacttgag gacctggttt gagcgcaagt atgacaagcc ggcccgtgag
     1021 gctcttttga aactgactga gcgcgcgcgt gagagtgcgt tggaaccctt gcaaagcgtc
     1081 gcggggacgt taagtcggtg gtttgaaccc attgtgcgct acattcgcca tcgctacacc
     1141 aacgggatga ccgaaggatt caacaccaaa attaagctga ttcaacgccg cgcctttggg
     1201 ttgcgaaatg aacacaaccg aaaaaagagg atattagcag attgtacaag gacttagact
     1261 cggcctaaat gatggcaaag agccaagtaa gcctacgcga ttaccgtaaa tttacaccat
     1321 gctgcgatgc cactgtctta aaaacctagg ttttgtag
//
LOCUS       DASQSL010000402         1224 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_3425, whole genome shotgun sequence.
ACCESSION   DASQSL010000402 DASQSL010000000
VERSION     DASQSL010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3425"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(91..561)
                     /gene="tadA"
                     /locus_tag="VE844_04050"
                     /pseudo
     CDS             complement(91..561)
                     /gene="tadA"
                     /locus_tag="VE844_04050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012667364.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0008251 - tRNA-specific adenosine
                     deaminase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0002100 - tRNA wobble adenosine to inosine
                     editing [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
     gene            complement(583..1134)
                     /locus_tag="VE844_04055"
     CDS             complement(583..1134)
                     /locus_tag="VE844_04055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015211952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HZC00548.1"
                     /translation="MSILQKNVLITPEEYLEGEKYSEVKQEYVGGHVYAMVGASEPHN
                     QIAINLTTALKLHLRGGPCRVFMSDMKVRVRDAFYYPNVLVSCDRTDANKYYKTQPVL
                     VIEVLSPTTEEKDSREKRVAYQSLPSLQEYVLVAQDRMDVRSYRRTPEGWDLETCFEG
                     DRVKLDPVGLDIPIEAIYEEVWR"
BASE COUNT          260 a          387 c          295 g          282 t
ORIGIN      
        1 tggctttagc cttgccgtgc acgtcgcaag ctttgagccc tctgttgacc ttgccatagt
       61 ccatacctta tagagaaccc catttccttc cctacgccgg tcctcaaaaa ataggtgcaa
      121 taaccggctg cattcatctg cgagcacccc accctgtacc tcgacgtgat ggttaagccg
      181 atcggtgccc aggatctcaa atacactgcc cgctgcaccg cttttgggat cataggcgcc
      241 aaacacaatc cgctctactc gtgcgtggat gatagccccg gcgcacatca cgcaaggctc
      301 gagggtcaca tacagcgttg cacccggcag gcgataattg ccaaggtttc gggcggccac
      361 gcgcagggcc acgatctcgg cgtgcgccgt gggatcgtgc tcggcaatcg gccggttcca
      421 accctcacct accgcggcac cgttcagcac gagcaccgcc ccgaccggca cctcgccttg
      481 ctcggctgcc tgtcttgcaa gcccaagggc acagcccatc cagtatccgt cctcattcac
      541 cgatcgaact gtcctgagaa tagcgattgt gagaaaccaa gactaccgcc atacctcctc
      601 atagatcgcc tcgatgggga tatccaaacc gacaggatcc agtttgaccc gatcaccttc
      661 gaaacaggtc tccaaatccc agccctccgg ggtcctgcgg tagctgcgaa cgtccatgcg
      721 gtcctgagcc accaggacat attcctgaag gcttgggagc gactggtaag cgacccgttt
      781 ttctcggctg tctttctctt ctgtagtcgg tgataaaacc tctatgacca gcactggctg
      841 ggtcttgtaa tacttattag cgtctgtccg gtcacagctg accagtacat tcggataata
      901 gaaggcatct ctgacgcgca ccttcatatc tgacataaat acgcgacagg gaccgccgcg
      961 caggtgaagt tttaaggccg tggtgaggtt tatggcgatc tgattatgtg gctcgctggc
     1021 ccccaccatc gcatagacat gtcccccgac atactcctgc tttacctcac tgtacttttc
     1081 accctccaga tattcttcag gcgtgatcag cacattcttt tgcagtatcg acatgaaaat
     1141 acccttgtct tgatctggag actattccca ctcaatcgtc gcggggggtt tcccggagat
     1201 atcataggtc acgcgcgcga tccc
//
LOCUS       DASQSL010000403         1120 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_126801, whole genome shotgun sequence.
ACCESSION   DASQSL010000403 DASQSL010000000
VERSION     DASQSL010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126801"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1120)
                     /locus_tag="VE844_04060"
     CDS             complement(<1..>1120)
                     /locus_tag="VE844_04060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006424854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00549.1"
                     /translation="VFCQLPDHRKGDAEIPLKERTEGNLQRVYGIGRVPCDTSMREIL
                     DPLEPEHLRPAFNVGFRHLQRGKALEKMVFVQGHYLLALDGTGYFASNEIHCDSCLET
                     HHRNGTVTYSHQMLGAVLLHPDRREVIPLMPEAIIKQDGIEKNDCERNAAKRFVTKFR
                     QDHPNLKVIVTEDSLSSNAPHIETLNTHDMRYILGVKEGDHAFLFKHVAEAERAGRVT
                     YYERYDRQKGIHHRFRFVCGMPLNASHAALRVNFIECWETVKGKVQHFSWITDLRVNK
                     GTVYRLMQGARARWRIENETFNTLKNQGYHFEHNFGHGYEHLSVVFAELMMLAFLVDQ
                     VQQLCCPLFQAAWARWGSKRLLWEKMRALFYHYKLTSMQ"
BASE COUNT          253 a          307 c          305 g          255 t
ORIGIN      
        1 gctgcatgga cgtcaactta taatggtaga acaaggcgcg catcttttcc cacagcaagc
       61 gtttgctgcc ccacctggcc caggccgctt ggaacagcgg gcaacacagc tgttgcacct
      121 gatccaccaa aaacgccagc atcatcaact cggcaaacac caccgagaga tgctcatagc
      181 cgtggccaaa gttgtgctcg aagtgataac cttgattttt cagcgtgttg aacgtctcat
      241 tttcaatgcg ccagcgggct ctcgccccct gcatgaggcg ataaaccgtg cccttattga
      301 cgcgcaggtc cgtgatccaa ctgaaatgct gcactttgcc cttcaccgtc tcccagcact
      361 cgatgaagtt gactcgcagg gcggcatggg atgcattgag gggcatccca cagacaaagc
      421 gaaagcgatg gtgaatcccc ttttggcggt cataacgctc ataataggtg acgcgaccgg
      481 cgcgctccgc ctcggccacg tgcttgaaca aaaaggcatg atcaccctct ttgacaccca
      541 gaatatagcg catgtcatgc gtgtttaacg tttcaatatg tggggcattc gaactcaggc
      601 tatcttcggt gacgatgacc ttgaggttgg ggtgatcctg acgaaacttg gtgacgaagc
      661 gcttggcggc gttgcgttca cagtcgtttt tctcgatgcc atcttgcttg atgatcgctt
      721 cgggcatcaa tgggatgacc tcgcgccgat cggggtgcag caggaccgct cctaacatct
      781 gatgggaata cgtcacggtg ccatttcggt ggtgtgtttc cagacatgag tcgcaatgaa
      841 tctcattgga ggcaaaatag ccggtgccat cgagggccaa cagataatgg ccctggacaa
      901 agaccatctt ttcaagggct ttgccacgtt gaaggtggcg aaatcccacg ttgaaagcgg
      961 gtctcaggtg ttcgggctca agcgggtcga gaatctcgcg catcgacgta tcacacggca
     1021 cccgcccgat gccgtaaacg cgttgcaagt tgccctcggt gcgttccttc aatgggatct
     1081 cggcgtcgcc ttttcggtga tcaggaagtt gacaaaagac
//
LOCUS       DASQSL010000404         1748 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_98442, whole genome shotgun sequence.
ACCESSION   DASQSL010000404 DASQSL010000000
VERSION     DASQSL010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1748)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1748)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98442"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            439..1395
                     /locus_tag="VE844_04065"
     CDS             439..1395
                     /locus_tag="VE844_04065"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HZC00550.1"
                     /translation="MATSATPSVAFSPRSKELRFQSGKISRFLLRDRTLGYLFLAPAL
                     LVVLCLVAYPFINAVLLTFQAKTAGAPAKFIGLDNYRELLNNPVFWRTVFNTIFYTVA
                     AVALKFVFGLGMALVLNQERLFNNFYRSFLLIPWAVPTVISALNWRWIYDDASGLINN
                     VLVRFELIDETISWLADPNLAMFSVIAVVVWQGTPFFTMGFLAGLQSISKELYEAAEI
                     DGASVVQQFWHITIPCLSPIIVTVVMLSTILTSAGIQFVLILTAGGPADRTMIFPMLS
                     YAYALGGAQRLGMGATVSLFFFPAFVILIYFLTRRMLAEKEI"
     gene            1399..>1748
                     /locus_tag="VE844_04070"
     CDS             1399..>1748
                     /locus_tag="VE844_04070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00551.1"
                     /translation="MALTKTGSQRMVKGVGNAVLALMLLWTAIPFYWMLVTSLKHDKE
                     IYGYEATLVPEKPTLANYVTILRDTPYLTFLRNSTVVAVGSTVISLIIACLGAYAIAR
                     LNFPGRALLARLLV"
BASE COUNT          290 a          524 c          495 g          439 t
ORIGIN      
        1 cgcattgctc tgccagggga gtcatcaggc tatgcgtctc cagtcaaacc tctgagcccg
       61 tccaatggat gggacacctg ccacggaacc gcttgcagct gaaagccaat ccccactgat
      121 cccgccggat tttgcttgac actccactcc aacctacgtt accgttcact cagattatgc
      181 atagttattg accagatgtg gctcaggtcc ggccacgaat caggcatcgt ttttacagta
      241 gacccctcag tcgactcacg tcattgggag aggcgatgca gccgatgtgg ttccgtcaca
      301 gtaccttctg gcgggctcga ctgtaccccc ccttgatgtt ttgcagtgcc gctcatggct
      361 tccgctccgt gtatcgctcc cgtccaagtg tttctcagtc gttagtccct ttgatgcaaa
      421 ctagggagga tttgggacat ggctacgtcg gcgactccga gcgttgcttt ctcgccgagg
      481 agtaaagagc tgcgctttca gagtggcaag atctcgcgct tcctgctgcg ggatcgcacc
      541 ctcggctatc tgtttctggc cccggcgctg ctggtcgtct tgtgcctggt ggcatatcct
      601 tttattaacg cggtcttgct cacgttccag gcgaagaccg cgggggcccc ggccaaattc
      661 atcgggctgg acaattaccg ggaattgctg aacaacccgg tcttctggcg cacggtgttt
      721 aacacgattt tctataccgt cgccgcggtg gcgctgaagt tcgtcttcgg gctcggcatg
      781 gcgctggtgc tcaatcagga gcggctcttc aacaatttct atcgctcctt cctgctcatc
      841 ccctgggccg ttcccacggt gatctcggcg ttgaactggc gttggatcta cgacgacgcc
      901 agcgggctca tcaacaacgt cctcgtacgc ttcgagctga tcgacgagac catctcctgg
      961 ctggccgacc ccaatctcgc catgttctcg gtgattgcgg tggtggtctg gcaggggacg
     1021 ccctttttta ccatggggtt cctggctggc ctgcagtcca tttccaagga gctttacgaa
     1081 gcggctgaaa tcgatggtgc ctcggtggta cagcagttct ggcacatcac cattccctgc
     1141 ctgtcgccga tcatcgtcac cgtggtcatg ctgtccacga ttttgacctc ggcgggcatt
     1201 cagtttgtgt tgatcttgac ggccggaggc ccggcggatc gcacgatgat ttttccgatg
     1261 ttgtcctacg cctatgcctt ggggggtgcc cagcggttgg gaatgggggc gacggtctcg
     1321 ctgttctttt tccccgcctt cgtgatcctg atttactttc tgacacgccg gatgctggcc
     1381 gagaaggaga tctaagccat ggctctgacc aagaccggct cgcagcgtat ggtgaagggg
     1441 gtcggcaatg cggtgctggc gctcatgttg ttgtggaccg cgatcccttt ctattggatg
     1501 ctcgtgactt cgctgaagca tgacaaggag atttacggct acgaggcgac gctggtcccc
     1561 gagaagccga ccctggccaa ctacgtgacc attctgaggg acacccccta tctgaccttc
     1621 ctccgcaaca gcaccgtggt ggcggtgggt tccacagtga tctcgctcat catcgcctgc
     1681 ctgggggcct atgccattgc gcgcctcaat ttccctggac gggcactgtt ggcgcgcctc
     1741 ctcgtgtg
//
LOCUS       DASQSL010000405         2210 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_126816, whole genome shotgun sequence.
ACCESSION   DASQSL010000405 DASQSL010000000
VERSION     DASQSL010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2210
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126816"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            238..1056
                     /locus_tag="VE844_04075"
     CDS             238..1056
                     /locus_tag="VE844_04075"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020680220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HZC00552.1"
                     /translation="MDINSKVAVITGASSGIGKAVAHDLARRGIRALALVDRSDSVNT
                     IAQFINEAVGNGVHAEAFTGDVTDEAFRREVYDQMTAKYSVPTICVPAAGITRDGFAT
                     KIDKQTGKAVIYPLELFRLVVEVDLLAPIYWALEMVGRIAEDRSKRGLKRWEPEEGVQ
                     GTVIFIGSISSQGNKGQIAYSAAKAGLEGAAATLMIEAMYHGVRCGVIHPGFTDTPMV
                     RALSEGYIQEHVLPQTQLRRLIRPEEIADAICFMISNSAVSGELWADAGWHPTP"
     gene            complement(1089..2021)
                     /locus_tag="VE844_04080"
     CDS             complement(1089..2021)
                     /locus_tag="VE844_04080"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HZC00553.1"
                     /translation="MSGKQRSSSDIMCRDAHTALPVGEDGLLAERLQRTGINPYYADP
                     ARGFVLLHGDCRELLPLLKASGIMPNLIFADPPYHLSNGGITCHSGKRVSVNKGSWDK
                     SAGVREDHTFVLSWSSVCLDSLAPGGSLWISGTHHVIFSVGYGLQQLGAKILNVIVWE
                     KTAPPPNLACRYYTHSHELVIWAKRSEKDRHTFHYALEKEANGGKQQKDIWYRRNLSA
                     RGEELLPNHWRIAAPQKAEKRLGRHPTQKPLELLDRIIRCSSDPGGLVLDPFCGSGTT
                     GIAALGNQRRFVGIDLERDHLELAKRRALYFVST"
     gene            complement(2018..>2210)
                     /locus_tag="VE844_04085"
     CDS             complement(2018..>2210)
                     /locus_tag="VE844_04085"
                     /inference="COORDINATES: protein motif:HMM:NF016895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HZC00554.1"
                     /translation="HLAGIGITADIQRVVLDKDTWYRVKIGPIKSPAELESMRSRLVK
                     NKINFIITRTKTGTAAGRG"
BASE COUNT          512 a          559 c          620 g          519 t
ORIGIN      
        1 atcaccctgc ttccgcatgg tgtgtgctta gtatactgca taccatgtgc caatgcttgg
       61 cagagtaagc gaatgactga atgactaatt aagccattca ttcaaaaagg gttttataat
      121 gcccagataa taactgaggt cgaaaatgga gttgcatgat gatagcctag atgatttgtc
      181 tactatttct agatagtatg tcgagagttt taaaattaaa atgtaaggat ctcacttatg
      241 gacatcaata gtaaggtcgc ggttatcacg ggcgccagca gtggtatcgg caaagcagtt
      301 gctcatgatt tggcccggcg tggcattcga gcactggcac tggtagaccg aagcgatagc
      361 gttaacacga tcgcccaatt catcaatgag gcggtcggca atggtgtcca tgccgaggca
      421 tttactggtg atgtgaccga cgaggcgttt cgccgcgagg tatacgatca aatgaccgca
      481 aaatacagcg tgccgaccat ttgtgtgccc gctgccggga tcacgcgcga cggatttgct
      541 accaagatcg ataaacagac cgggaaggcc gtcatttacc cactggaatt gtttcgtctg
      601 gtggttgagg tagatttgtt ggcgccgatc tactgggcat tggagatggt cggccgaatc
      661 gccgaggacc gatccaaacg cggtttgaag cgctgggagc cggaagaggg tgtgcagggc
      721 acagttatct ttatcggctc gatatcctcc caaggcaata agggacagat cgcctactcg
      781 gcggccaagg ccggtctgga aggtgcagcg gctacgctga tgatcgaagc gatgtatcat
      841 ggtgtgcgtt gcggcgtgat ccaccccggc tttaccgata caccgatggt ccgagcgcta
      901 agcgagggat acatccagga gcatgtcttg ccacaaacac agttacgtcg gctgatccgt
      961 cccgaggaga tcgccgacgc catctgtttt atgatctcca attccgcagt cagtggagag
     1021 ctctgggccg atgccggctg gcatcctacg ccgtgatcct ccaatcggga cgaattagga
     1081 aagatcgttc atgtagatac aaaatagagc gcccgccgtt tggctaattc tagatgatcg
     1141 cgctccagat caatacccac aaatcggcgt tggttgccaa gggcagcaat acccgtagtg
     1201 ccgctgccgc aaaaaggatc taagactaaa ccgcccggat cggaggaaca gcggatgatc
     1261 cggtcgagaa gctctaaggg cttttgcgtg ggatgccttc ccaaacgctt ttccgctttc
     1321 tggggagccg cgatccgcca gtgattaggc aacaactcct cacccctagc acttaaatta
     1381 cggcgatacc agatgtcttt ttgctgcttg cccccattgg cttccttttc aagggcatag
     1441 tggaaggtgt gtcggtcttt ttcggatcgc ttggcccaga tcacaagctc atgggaatgg
     1501 gtgtaatagc ggcaggctag attgggaggc ggggccgttt tctcccacac aataacgttc
     1561 aagatcttcg ctcccagttg ctgtaaacca tagcctaccg agaagatgac atggtgggtc
     1621 ccgctgatcc agagagaacc gcctggggct agtgaatcca ggcaaacaga cgaccaggaa
     1681 agcacgaacg tatgatcttc acggacaccg gcgcttttat cccagctgcc cttgttgacg
     1741 gagacccgtt tgccgctatg gcacgtgatc cctccgttgg agaggtgata ggggggatcg
     1801 gcgaaaataa ggttgggcat gatgcctgag gccttgagca gaggtaagag ttcgcggcag
     1861 tcgccatgta acagcacgaa tcctcgtgca ggatccgcat agtaagggtt aatgccggtt
     1921 cgctgtaggc gctcggcgag gagcccatcc tcccctacgg gcaatgctgt atgtgcgtcc
     1981 ctgcacatga tgtctgatga actgcgctgt ttaccgctca tcctcttccc gcagcagtcc
     2041 cggtcttggt ccgagttatg ataaagttta ttttgttctt aaccagccgg ctgcgcatcg
     2101 attccagctc ggcgggactt ttgatcgggc cgatcttgac ccggtaccat gtatccttat
     2161 ctaggacgac ccgttgaata tccgcggtga taccgatccc ggctaaatga
//
LOCUS       DASQSL010000406         1009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_58012, whole genome shotgun sequence.
ACCESSION   DASQSL010000406 DASQSL010000000
VERSION     DASQSL010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58012"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            203..>1009
                     /locus_tag="VE844_04090"
     CDS             203..>1009
                     /locus_tag="VE844_04090"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HZC00555.1"
                     /translation="MIDADGHCYEPDSDLAKWMPKEIAHLAPNRVTDSSGYLHLLIEG
                     RLAARRRWGGGSDRSQVFASHIERSRPGMTDPLKRLPDMDEEGIDVAIIFGTSIALMV
                     NGMADKPLAAAVCHAVNRWLVEEYLAPDPKRLKGVGLIPVQDPPAAVKELEYLAQHRS
                     IVTAMLPTNVYGINLGHRMFDPIYTAAQEIGMPLSVHPQTEHDGQYGVWGVMGAGSER
                     MEKYSYVHMTAFPFELMIALMHLIGEGVFDRYPKLKIAFMEGACGWVPFWA"
BASE COUNT          213 a          285 c          298 g          213 t
ORIGIN      
        1 gctttttctt gcgaccttga gccgcgcctc tccgctgcag tttctcgctg tgctttgtcc
       61 atgaacaact gaaaggttga gtgagtggcg tgacatgcaa atgttgcacg agcagtggaa
      121 tcggttgcat tggcgggaga acccgattag gaagatggca aaatctcaga cacggcttgg
      181 aggaattatg gcgagaaatt tagtgatcga tgccgatgga cactgctacg agccggatag
      241 cgatcttgcg aagtggatgc cgaaagagat tgctcatctg gcgcccaatc gtgtgaccga
      301 cagttccggc tatttgcact tgctgatcga aggccggctc gccgcccgac gccgctgggg
      361 cggcggttcg gatcgcagtc aagtattcgc ctcgcatatc gagcgcagcc gtcccggcat
      421 gaccgatccg ttaaagcgcc tgcccgacat ggacgaagaa ggtatcgatg tcgcgatcat
      481 cttcggcacc tccatcgcgc tcatggtcaa cggcatggcc gacaaacccc tggcagccgc
      541 cgtgtgtcat gcggtcaatc gctggctggt cgaagaatac ctcgcgcccg atccaaagcg
      601 actgaaaggc gtcggcctga ttcccgtgca agatccaccc gcagccgtga aggaactgga
      661 atatctcgcg cagcaccgct cgatcgtcac ggccatgctg ccgaccaacg tttacggcat
      721 caatttgggc catcgtatgt tcgatcctat ttacaccgcc gcacaggaaa tcggcatgcc
      781 gctgtcggtc catccgcaaa cggagcacga cgggcaatac ggcgtctggg gtgtgatggg
      841 cgccggcagc gagcgcatgg aaaaatacag ctacgtgcac atgaccgcgt ttcccttcga
      901 gctgatgatc gcgctcatgc acttgatcgg cgagggagtc ttcgatcgtt atcccaaact
      961 gaaaatcgcc tttatggaag gcgcctgtgg gtgggtgccc ttttgggcc
//
LOCUS       DASQSL010000407         5318 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_126825, whole genome shotgun sequence.
ACCESSION   DASQSL010000407 DASQSL010000000
VERSION     DASQSL010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 5318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5318
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126825"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2748)
                     /gene="rpoB"
                     /locus_tag="VE844_04095"
     CDS             complement(<1..2748)
                     /gene="rpoB"
                     /locus_tag="VE844_04095"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012638887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HZC00556.1"
                     /translation="MAYSYAEKKRIRKSFGKRPTILEVPYLLAMQIESYRGFLQADAA
                     PEQRKNVGLHAALKSVFPITSYSGNAVLKYVSYRLSVPVFDVKECQVRGLTYGASLRV
                     KIQLVIYDKESGSSKAIKDIKEQEVYLGELPLMTDNGTFVINGTERVIVSQLHRSPGV
                     FFDHDRGKTHSSGKLLFSARIIPYRGSWLDFEFDSKDYTYVRIDRRRKIPATILLRAL
                     GYGTEEILGLFFETTTFRLAKGEGITMELVPSRLRGETLAFQIKDKEGKVLVEKDRRI
                     TLRHIKAIEKAGLKAIPIPVDYLIGKIVAKEVVDTSTGEIIIEANAELSLEAVERLLG
                     SNIKEIRTIYANEFDHGRYISDTLRIDPTHTPLEAQVEIYRMMRPGEPPTKEAAENLF
                     KSLFFSPDRYDLSPVGRMKFNRRIGRSATEGPAVLSKEDIVDVLRTLINIRNGNGTVD
                     DIDHLGNRRVRSVGEMVENQFRVGLVRIERAVKERLSLAESEGVMPQELINAKPVSAV
                     IKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVC
                     PIETPEGPNIGLINSLAVYAQTNAHGFLETPYRKVREGRATDEIEYLSAIEEGQYVIA
                     QANARLDAEGRLTDELVSCRHQNEFTLSAPDKVHYMDVSPMQIVSVAASLIPFLEHDD
                     ANRALMGSNMQRQAVPVLRAEKPIVGTGMERPVAIDSGVAVAAKRGGVVDAVDASRIV
                     VRVNDEETEPDEPGVDIYTLTKYTRSNQNTCINQKPLVKPGDRITRGDVLADGSSTDM
                     GELALGKNMLVAFMPWNGYNFEDSILLSERVVQEDKYTSIHIEELTCMARDTKLGPEE
                     ITADIPNVSESALAKLDGSGIVYIGAEVNPGDILAGKVTPKGETQLTPEEKLLRAIFG
                     EK"
     gene            complement(2866..3246)
                     /gene="rplL"
                     /locus_tag="VE844_04100"
     CDS             complement(2866..3246)
                     /gene="rplL"
                     /locus_tag="VE844_04100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HZC00557.1"
                     /translation="MAVSKEEILEAISKMTVLDVVELTEAMEQRFGVSAAVAMAPAAG
                     AAAAPAAPPVEEQTEFTVVMTSFGSNKVGVIKVIREITGLGLKEAKDLVEGIPATVKE
                     GISKDESESIKKKLVDAGANVEIK"
     gene            complement(3290..3820)
                     /gene="rplJ"
                     /locus_tag="VE844_04105"
     CDS             complement(3290..3820)
                     /gene="rplJ"
                     /locus_tag="VE844_04105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012638889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HZC00558.1"
                     /translation="MSLNLKQKQTIVADVANVAQQAQVAIAAEYSGLTVAEMTELRKA
                     ARNTGVYVRVVRNTLARRALENTHFACMREGLVGPLMLMFSPEDPGAAARVVETFTKS
                     NNKLVVKGVAMGGKLLDPSSIKSLANLPTRDQAIGLLIAVMKAPISRLVHTLAEPLAK
                     LARTLAAIREQKQVAA"
     gene            complement(3972..4664)
                     /gene="rplA"
                     /locus_tag="VE844_04110"
     CDS             complement(3972..4664)
                     /gene="rplA"
                     /locus_tag="VE844_04110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012638890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HZC00559.1"
                     /translation="MARLTKRAKVIREKLEPSKHYPLEEAFRLLKEVSTVKFDESVDV
                     AVNLGVDPRKSDQTVRGSTVLPRGTGKTVRVAVFAQGARAEVAREAGADRVGLEDLVA
                     EVKAGQINFDVVIASPDTMAVVGQLGPILGPRGLMPNPKVGTVTPDVAVAVRNAKGGQ
                     VRYKTDKAGIIHCPIGKVSFEIAALRENLEILIADLVKAKPSTAKGVYLEKITVSTTM
                     GPGIVVDRTAFA"
     gene            complement(4667..5101)
                     /gene="rplK"
                     /locus_tag="VE844_04115"
     CDS             complement(4667..5101)
                     /gene="rplK"
                     /locus_tag="VE844_04115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007226974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HZC00560.1"
                     /translation="MAKKIQAYVKLQVPAGQANPSPPVGPALGQHGVNIMEFCKTFNA
                     QTKNLEPGLPTPVIITVYSDRSFTFVTKTPPASVLLRKSLGISKGSSTPNTSKVGRIT
                     RAQLEVIARTKAPDLTAADLEAAVQTIAGTARSMGIETEGGI"
     gene            complement(5116..>5318)
                     /locus_tag="VE844_04120"
     CDS             complement(5116..>5318)
                     /locus_tag="VE844_04120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016356724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="KOW motif-containing protein"
                     /protein_id="HZC00561.1"
                     /translation="QEGTDKPRPKILFEVGEVVRVKEGPFADFNGVVEEVNYEKNRLR
                     LAVLIFGRSTPVDLEFSQVEKQ"
BASE COUNT         1141 a         1629 c         1317 g         1231 t
ORIGIN      
        1 cttctctcca aagatcgccc gcaacaattt ttcttccggg gtcagctggg tctccccttt
       61 gggggtgacc ttgcccgcca agatatcccc cgggttgacc tcggccccga tatagacgat
      121 cccggatcca tcaagtttag ccaaggcgct ctcactgaca ttggggatgt cggcggtgat
      181 ctcttccggt cctagcttcg tatcgcgggc catacaggta agctcttcaa tatggatact
      241 ggtatattta tcttcctgca cgacccgctc ggagagcagg atcgaatcct cgaagttgta
      301 accattccag ggcatgaacg cgaccagcat gttcttgcct aaggccaact cccccatatc
      361 cgtggaactc ccatcggcga gcacatcgcc ccgggtaata cgatcccccg gcttgactag
      421 gggcttttga ttgatacagg tattctgatt ggaacgggtg tacttggtaa gcgtgtagat
      481 atccaccccc ggctcatcgg gttcagtctc ctcgtcgttg acccgcacca cgatccggct
      541 cgcatccaca gcgtccacca ccccgccgcg cttggccgcc accgcaaccc ccgagtcgat
      601 cgccactggc cgttccatgc ctgtgccgac tataggcttt tcggcccgga gcaccggcac
      661 agcttggcgt tgcatgttgg aacccatcag cgcccggttg gcgtcatcgt gctccaggaa
      721 agggatgagg gatgccgcta ccgacacgat ctgcatcggc gatacgtcca tatagtgcac
      781 cttatccggc gcagacaagg taaactcgtt ctgatggcgg caggaaacca gctcatccgt
      841 gagcctgcct tcggcatcca ggcgcgcatt cgcctgggca atcacatact ggccttcttc
      901 gatggccgac aggtactcga tctcatcggt cgctcggcct tccctgacct tgcgataagg
      961 ggtctcgaga aagccatggg cattggtctg cgcatacacc gcaagcgaat tgatcaggcc
     1021 gatgtttgga ccttcggggg tctcgatcgg gcagacccgg ccataatggg tcggatgtac
     1081 atcgcggacc tcaaatccgg cccgctcccg cgtgagccca ccgggcccca gggccgagac
     1141 acggcgctta tgggtcacct ccgagagggg attgttctgg tccataaact gggacaactg
     1201 gctcgaacca aagaactcct tgatgaccgc agacaccggt ttggcattga tcaattcctg
     1261 gggcatcacc ccctcggact ctgccaggct caaacgctcc ttgaccgcac gctcgatccg
     1321 caccaaaccc accctgaact ggttttcgac catctcgccg acactgcgca cccggcggtt
     1381 acccagatga tcgatgtcat cgactgtgcc attaccatta cgaatgttga tcaaggtcct
     1441 taagacatcg acgatatcct ctttggacaa taccgccggt ccttctgttg cagaacggcc
     1501 gatacgccgg ttgaatttca tgcgccccac cggtgacaga tcatagcggt cagggctgaa
     1561 aaaaagactt ttgaagagat tctctgcggc ttccttggta ggaggctcgc ccggccgcat
     1621 catccgatag atctcgactt gcgcttccaa aggggtgtgc gtgggatcga tacgcaaggt
     1681 gtcggagata tatcggccat gatcgaactc gttcgcgtag atggttcgga tctccttgat
     1741 gttactgccc aacaaccgct ctactgcttc gaggctaagc tcggcattgg cttcaataat
     1801 gatctccccg gtcgaggtat cgacgacctc cttcgcaact attttaccga tcaggtaatc
     1861 taccgggatg gggatggcct tcaagcccgc tttttctatg gccttgatat gccgaagcgt
     1921 aatacgccgg tccttctcca ccagaacctt gccctcctta tccttgatct ggaaagccag
     1981 ggtctcgcct cgcagtctgc tcgggaccag ttccatcgtg atcccctcgc ccttggcgag
     2041 acggaaggtc gtggtctcaa agaacaaccc caggatctcc tccgtgccat accccagggc
     2101 gcgcaataag atcgtcgccg ggatcttcct gcgccggtcg atgcggacat acgtgtaatc
     2161 tttggagtcg aactcgaaat cgagccacga tcctcggtaa ggaatgatcc gtgccgagaa
     2221 cagcaattta cccgaagagt gcgtcttgcc gcggtcatgg tcgaaaaaga ccccgggtga
     2281 gcggtgcaat tgagagacga tcacccgttc cgtgccgttg atgacaaatg tgccattatc
     2341 ggtcatgagc ggcagttcgc ccaggtagac ttcctgttct ttaatatcct tgatggcctt
     2401 gctcgaaccc gactccttgt cgtagatgac caattgtatc ttgacccgta gcgatgcccc
     2461 gtaggtcaag ccgcgcactt ggcattcctt gacatcaaag acagggacgc tgagacggta
     2521 actgacgtat ttgaggaccg cgtttcccga atagctggtg ataggaaaca ccgatttcaa
     2581 tgcggcatgc aacccgacat tcttgcgctg ctctggagca gcatccgctt gcaagaatcc
     2641 ccggtaggac tcaatctgca tcgcgagcag ataagggacc tccaggatcg tcggacgctt
     2701 accaaaactc ttacggatcc gcttcttctc tgcgtacgaa taggccataa tcatcgattg
     2761 ctcgttgcgt taatgctgaa atagaacaaa aaggctggtg actcacgcca ccagccgtgc
     2821 gtttgaaata actaacagag ggtttgccaa gcgaagtagt ggtaactatt tgatctccac
     2881 attggcaccg gcatccacca gtttcttctt gatcgattcg gactcatctt tggagatccc
     2941 ttctttgacc gtagccggga tcccctccac cagatccttg gcctccttaa gcccaagccc
     3001 ggtgatctca cgaatcacct tgatcacacc taccttgtta ctgccaaaac tggtcatgac
     3061 tacagtaaat tcagtctgct cttcgacagg gggagcagcg ggtgccgccg cagcacccgc
     3121 tgcaggtgcc atcgccaccg ccgccgaaac gccaaatctc tgctccatgg cctcggtcaa
     3181 ttcgacaaca tcaagcacgg tcatcttaga gattgcctcg agtatttctt ctttagatac
     3241 agccattgct tttactccct aaattaaatt cgtaaccatc aatatagcgc taagcagcca
     3301 cctgcttctg ctcgcggatc gcagcgaggg tccgggcgag cttagcaaga ggttcggcaa
     3361 gcgtgtgcac cagccggctg atcggagcct tcatcactgc tataagcaag ccgatcgcct
     3421 gatcgcgcgt aggtaggtta gccagtgact tgatgctact cggatcgagc agcttgccac
     3481 ccatagccac ccctttgact accagcttat tattagactt ggtaaaagtc tccacgaccc
     3541 gcgccgccgc acccggatcc tccggggaga acatcaacat caaaggcccc accaatccct
     3601 cgcgcatgca cgcaaagtgt gtgttttcca gggctcttcg cgccaaggta ttacgaacca
     3661 cacgcacata aacgcctgtg tttcgggcag ccttgcgtaa ctccgtcatt tcggctacgg
     3721 tcaagccgct atactcggcg gcgatggcta cctgggcttg ttgagcaacg ttagccacgt
     3781 ccgccactat ggtttgtttc tgtttgagat taagactcac actgtcttct cctggtaagc
     3841 cacacataga tggaggttat tacctatacg gtgccttcac ccaggatgca aacgcctcgg
     3901 gcaacaccgt ctgcgcaggc caacctcctg attaagggtg ggggctaagt atacatcgca
     3961 agcgtatacc gctaagcaaa agcggtacga tccaccacga tccctggccc catcgttgta
     4021 gaaaccgtga tcttctcaag ataaacaccc tttgccgtac tcggcttggc cttgacaaga
     4081 tccgcgatca agatctccaa attttcgcgc aaggcggcga tctcaaacga caccttaccg
     4141 atcgggcaat ggatgatccc ggccttatcc gttttatagc gtacctggcc ccctttagcg
     4201 ttgcggacag ctacggccac atccggggtc accgtaccga ccttgggatt gggcatgagc
     4261 ccccggggtc ccaagatcgg tccaagctgc cctaccacag ccatggtatc cggggaagcg
     4321 atcactacat caaaattgat ctgtccggcc ttcacctcgg ccaccaggtc ttccaaacct
     4381 accctatctg cccccgcctc tcgcgccacc tctgctcgtg ccccctgggc aaacaccgcg
     4441 acccggacgg tcttgccggt tccacgcggc aataccgtcg agcctctcac ggtctgatcc
     4501 gacttgcgcg gatcgacccc cagattaacg gctacatcca ccgattcatc gaatttcacc
     4561 gtggaaacct ctttaaggag ccgaaacgcc tcctccaacg ggtaatgttt acttggctcg
     4621 agcttttccc tgatgacttt ggcacgcttg gtaagtcttg ccatcgctat atccctcctt
     4681 ctgtctcgat acccatgctt cgcgctgtac ccgcgatcgt ctgcaccgcc gcctctagat
     4741 cggcagccgt taaatcaggt gccttggtcc gtgcgatcac ttcaagttga gcgcgggtga
     4801 ttctgcctac cttgctggta ttcggcgtgc tgctaccctt ggagatccct aaagactttc
     4861 tcaataacac cgaggccggg ggagtcttag tgacaaaggt aaaactccgg tcggaataca
     4921 cggtaataat aaccggcgtg ggcagacccg gttcgagatt tttggtctgc gcattaaagg
     4981 tcttacagaa ttccatgatg ttcacgccat gctgccccaa cgcaggtcca accggcggac
     5041 ttggattcgc ctgacctgcg ggtacctgca actttacata ggcttggatc ttctttgcca
     5101 cacggaaata ctcccttact gcttttcaac ctgactaaac tcgagatcga ccggtgtaga
     5161 ccgtccaaag atcagtactg ccagacgcag gcgattcttc tcgtaattca cctcttcgac
     5221 tacaccgtta aaatcggcaa acggaccttc tttgacccgc acgacctcac ccacctcgaa
     5281 gaggatcttg ggacgtggtt tatcggtccc ttcttgga
//
LOCUS       DASQSL010000408         1040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_126827, whole genome shotgun sequence.
ACCESSION   DASQSL010000408 DASQSL010000000
VERSION     DASQSL010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126827"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..575)
                     /locus_tag="VE844_04125"
     CDS             complement(<1..575)
                     /locus_tag="VE844_04125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ISKra4 family transposase"
                     /protein_id="HZC00562.1"
                     /translation="MSPRGYSGPLQRAMTDFGADESFEKAVGKLKEHYGIEVPVSAVR
                     GVTLRHAAQMAVEEERSEVAELAAEGVERVIAAVDGSMIPIVQVAPPSEREPEEGRKR
                     RHLEWNEARLSLAHAQGCVTPHFAATLGDPDDAGDQLKHCAIQAGMGKNTAVHCVGDG
                     APWIADQIERVFGAQGGFLVDFYHLCDYVGAA"
     gene            complement(641..925)
                     /locus_tag="VE844_04130"
     CDS             complement(641..925)
                     /locus_tag="VE844_04130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00563.1"
                     /translation="MSKKSIDERLKAHPMLQGRIEAILDIVEDSAGKVARADEAERRM
                     IEEVRQLGNEALQGWAECKVEEQEGMVLRHGEAIKRNGKKNSTGTRRSAQ"
BASE COUNT          190 a          384 c          218 g          248 t
ORIGIN      
        1 gctgccccta cataatcaca cagatgatag aaatccacca gaaagcctcc ctgcgcgcca
       61 aagacccgtt ctatctgatc ggcgatccac ggggcgccgt cccccacaca gtgtaccgcc
      121 gtgtttttac ccatccctgc ctggattgca cagtgcttga gctggtctcc agcgtcatcg
      181 gggtcgccga gggtcgccgc aaagtgcggc gtcacgcatc cctgggcatg ggctaggctt
      241 aagcgggctt cattccattc taagtggcgg cgcttgcgcc cctcctcagg ctccctttcg
      301 ctcgggggcg cgacctgcac gatcggaatc atgctcccat caaccgcggc aatgaccctc
      361 tcaaccccct ctgcagccag ttctgctacc tccgaccgct cctcctctac cgccatctgc
      421 gccgcatgcc tgagggtcac cccccgtacc gcactgaccg gaacttcaat cccataatgc
      481 tctttgagct tgcctaccgc cttctcaaag gattcatccg ccccaaaatc ggtcatcgcc
      541 cgttgtaacg gccccgaata accccgcggg ctcacccccg cccctgacct aaacgggtat
      601 aacgtgcagc ccccctgaac caagatcggc tcaaccactt ctattgggcc gaacgtcgtg
      661 taccagtaga gtttttttta ccattcctct tgatggcctc cccgtgcctg agtaccatac
      721 cctcctgttc ttctactttg cactccgccc agccctgcag ggcttcgttc cccaactgac
      781 ggacttcctc aatcatccgc cgctcggctt catccgccct cgctaccttc ccagcgctat
      841 cttctactat atccaagatc gcttcgatac gaccctgcaa catgggatgg gccttcagcc
      901 gctcgtctat gctcttctta ctcatgggta gcctcctatc attgctcctc ccttctctac
      961 tacaattctg ttcacttgcc tagcccgtca gacatcagtt ttaattgcac ccgatgccaa
     1021 aggcttcttc aagcatgtcg
//
LOCUS       DASQSL010000409         3277 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_3476, whole genome shotgun sequence.
ACCESSION   DASQSL010000409 DASQSL010000000
VERSION     DASQSL010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3277
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3476"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..208
                     /locus_tag="VE844_04135"
     CDS             <1..208
                     /locus_tag="VE844_04135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00564.1"
                     /translation="EWHRISAGREAPGLTPMFIGTCAKFVYLATASRDDNAPNVIKVL
                     NSKFFTTYLLRLTNPDLIGIKRRT"
     gene            208..342
                     /locus_tag="VE844_04140"
     CDS             208..342
                     /locus_tag="VE844_04140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00565.1"
                     /translation="MRLTHLVNALALATKRVAQQVRAQGVQAFLRFVRLSLRSSLAAA
                     "
     gene            790..1434
                     /locus_tag="VE844_04145"
     CDS             790..1434
                     /locus_tag="VE844_04145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014705728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HZC00566.1"
                     /translation="MLQFELNAELRADLGKKASRRLRRAGQIPVVLYGAGKAPLALQL
                     NHNEMLQQLAQEAFYSHILTLRYGGSHDKVVLKDLQRHPYKTQVLHMDFLRVDESEKL
                     TMRVPLHFINEDKCIGIKQQGGIASHLMTEVEITCLPRHLPEYLEVDVTEVRVETSLH
                     LSDLKVPEGIEFVALVHGADPAVFSVHLPKGAHEEVEGETTAETAVTSTAPAKP"
     gene            1468..2049
                     /gene="pth"
                     /locus_tag="VE844_04150"
     CDS             1468..2049
                     /gene="pth"
                     /locus_tag="VE844_04150"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012637114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HZC00567.1"
                     /translation="MSTGIELLVGLGNPGPAYAETRHNAGFWFLYRLARRHALSFREH
                     ARFYGHVARLTLDGGSCWLLKPMIFMNRSGQGTAALANFYRIPPAHILVVHDELDLPP
                     GTVRLKHGGGSGGNKGLRDIIACLGDSGFSRLRLGVGHPGQRDQVTPYLLSRPPETDR
                     EAIVAAIESALELLPEILSGESAKVMNQLHRKT"
     gene            2052..3143
                     /gene="ychF"
                     /locus_tag="VE844_04155"
     CDS             2052..3143
                     /gene="ychF"
                     /locus_tag="VE844_04155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000506572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HZC00568.1"
                     /translation="MGFKCGIVGLPNVGKSTLFNALTRAGIAAENYPFCTIDPNIGRV
                     AVPDPRLSQLCAIAKPQKTVPAYMEFVDIAGLVAGASHGEGLGNQFLAHIRETQAIVQ
                     VVRCFEHEHVIHVTGRVDPLADIETINTELALADLETVWRALGRAGKRANVGDKEARI
                     AKALFERVWDWLNQGHPARTLALTDKDREHLKELQLLTLKPTLYITNVREEEIGGNRW
                     TREVEELALREGALSLRICAAIEAELVSLEDPEQHEYLEALGLEEPGLDRIIRAGHRL
                     LGLHTFFTRDSKEVRAWTVKVGATALEAAGIIHSDFERGFIRAEVIAFEDFIAYHGEQ
                     GAKEAGKWRLEGKDYVVQDGDVIYFRFNV"
BASE COUNT          693 a          900 c          974 g          710 t
ORIGIN      
        1 ggaatggcac aggatttcag ctgggagaga agcgcccggg cttacgccga tgtttatcgg
       61 cacttgtgct aagttcgtat atttagcgac tgccagtcga gatgataacg cgccaaatgt
      121 aattaaagtg ctcaactcaa aatttttcac cacatatctt ttgcgcttga caaaccccga
      181 cctcataggg attaagcgcc gcacttgatg cgcctgacgc acttagtgaa tgccttggcg
      241 ctggccacca agcgtgtcgc ccaacaggtg cgcgctcagg gcgtgcaggc attcctacgc
      301 tttgtgcgct tgagcttgcg ctcatcgcta gctgcggcgt gagtggatag aacgctttcg
      361 agccacgccc ttgcagttgc gactcgaata gccgcccccc ctgcgcaccg ccctaacgac
      421 caccgaggtc gtcgaaatgg gtctcggcag gggccctttg cgccgcggaa atcgtgccgt
      481 tgaaaaaagt agcttgagtg cctgggctac tcctcttatt ttggcggcta ctatcgcttg
      541 aaacatgcta aagggcagcg ggcgacaagt cacaatgggg aaaaaagaaa attaggctaa
      601 ctcatgcgtc agggctggct cggtcgtggg gaaaacctgg gttttgattt tggtggtaaa
      661 ataaagtggg gcaagcgggg caactatggc ggtattctca cctttgctcc gcttatcctt
      721 taagcaaaac agacgcttga gtgatgtttc caatgtttgt ggctcaaatc tttaggagaa
      781 caagcagaca tgctgcaatt tgaattgaac gccgagctgc gggccgatct cggcaagaag
      841 gcaagtcgcc gtctacgccg tgccggccaa atcccggtgg tcctgtatgg tgccgggaaa
      901 gcgcccctgg ccttacagtt gaatcacaat gagatgcttc aacagctggc ccaggaagcc
      961 ttctattccc atatcctgac cctccgctat gggggcagcc atgacaaggt ggtgctcaag
     1021 gatctacagc gccaccctta caagacccag gtgttgcaca tggacttcct gcgcgtcgat
     1081 gaaagtgaga agctgacgat gcgcgttcca ctgcacttta tcaatgagga caagtgtatc
     1141 ggtatcaagc aacaaggtgg tattgccagt cacttgatga ctgaggtcga gatcacctgc
     1201 ctgccgagac acctgccgga gtacctcgag gtggatgtga ctgaagtgcg tgtcgagacc
     1261 agtctacacc tctccgatct taaagtcccg gaagggatag aattcgtcgc gctggtgcac
     1321 ggcgccgatc cggcagtgtt ctccgtgcac ttgccaaaag gtgcccatga agaagtagag
     1381 ggagaaacca ccgccgagac ggccgttacc tcaacggccc ctgcgaagcc ctaaccttta
     1441 aggtcagcgc accttgcacg gctgtccttg tcgaccggga ttgaactgct ggtaggcctt
     1501 ggcaatccgg gtccggccta tgctgaaacc cggcacaacg ccggcttctg gtttttgtat
     1561 cggctggctc gccgacatgc gctcagcttt cgggaacatg ctcgattcta tggacacgtg
     1621 gcccgtttaa ccttggacgg cggtagctgc tggctgctca aaccgatgat ctttatgaac
     1681 cgcagcggcc aaggtaccgc ggcgcttgcg aacttttacc gtatcccccc cgcgcacatc
     1741 ctggtggtgc atgatgagct ggatctgccc ccggggacgg tccgtctcaa gcatgggggc
     1801 ggctccgggg ggaataaggg cctgcgggat atcatcgcgt gcctggggga tagcggattc
     1861 tcgcggctgc ggctgggtgt aggacatccc ggacagcggg accaggttac gccttaccta
     1921 ctgagccgcc cccctgaaac cgaccgggag gctatcgtgg ctgcgatcga gtcagcgctt
     1981 gagctgttgc cggagattct gagcggcgag tctgccaagg taatgaacca actgcatagg
     2041 aagacataaa ggtgggtttt aaatgcggta tcgttggcct gccgaatgta ggtaagtcga
     2101 cgcttttcaa tgcgctgacg agagccggca ttgcggcgga aaactatcct ttttgcacca
     2161 tcgatccgaa cataggccgg gtcgctgtgc ccgatccgcg cctctctcaa ctttgcgcca
     2221 tcgccaaacc tcaaaagacc gtccctgcct acatggaatt cgtcgatatc gccggactcg
     2281 tcgccggggc ttcgcacggg gagggcttgg gcaatcaatt cctggcccat atccgggaga
     2341 cccaggccat cgtgcaggtg gtgcgctgtt tcgagcatga gcacgtgatc catgtgacgg
     2401 gccgggtcga tcccttggcc gatattgaga ccatcaatac cgagcttgcg ctggcggatc
     2461 tggagacggt gtggcgggcc ttgggtcgtg ccggcaaacg ggccaacgtg ggcgataaag
     2521 aggcgcggat cgccaaggcc ttgttcgaac gcgtctggga ttggctcaat caagggcacc
     2581 cggcccgcac cttggcgctt accgataagg accgtgaaca cctcaaagaa ttgcagcttt
     2641 tgaccctgaa acccaccctc tatatcacca acgtccgtga agaggagatc ggtggcaatc
     2701 gctggacccg tgaggtcgag gagttggccc tgcgagaggg tgctctgagc ctgcggatct
     2761 gtgcggctat cgaagcagag cttgtgagcc ttgaggatcc ggaacagcac gagtatttag
     2821 aagccctggg gctggaagag cccgggctcg atcggatcat ccgtgccggt caccggctcc
     2881 tcggtctaca cacctttttc accagagatt ctaaagaggt ccgcgcctgg acggtgaagg
     2941 ttggggccac cgccttggag gccgctggca tcatccactc ggactttgaa cggggtttta
     3001 tccgcgccga ggtcatcgcc tttgaagatt ttatcgccta tcacggcgag caaggcgcca
     3061 aagaggcggg taaatggcgc ttggagggta aggattatgt agtgcaggat ggggatgtca
     3121 tatactttcg ctttaatgtc taggcgcttc gtccaaggag gggctcgtgt cttacgggga
     3181 cgttgccatc gctcctccag aacaagctcc gcaagcgctt cggtttagcg gagcgcgagc
     3241 tacatttaag tgagcacatc atcctcgccc acacctt
//
LOCUS       DASQSL010000410         1313 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_154402, whole genome shotgun sequence.
ACCESSION   DASQSL010000410 DASQSL010000000
VERSION     DASQSL010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1313
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154402"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1144
                     /locus_tag="VE844_04160"
     CDS             <1..1144
                     /locus_tag="VE844_04160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00569.1"
                     /translation="QCYPIAIDGTQKLVRNGQWQAEQWLERRRQRAEGEHVQQYVYVL
                     EANRVLHNGVTLPLLSEFLSYGEGDPDDHKQDCELKAFYRLAARLKAYFPRLPIVLLL
                     DGLYPNGPLMALGRQYQWQFMIVLPAKCLPLVWEEVEALKPRPPHYRKHQHWHGPQQQ
                     FGWVNDITSSYEGDRKSLLVHGVGCEETWQEVDPATSELIDKQPQPMWLSSQRLCHHT
                     VHERCNLGARQRWGIEVSMQVEKRQGYCYEHAFSHHWNAMQGYHYLMRLAHLLNALAL
                     ATKRVASQAHAGRPGVSALCARELCPSLAAPGVAAATACPSPATAARIAATLFEISPV
                     VCRNRPNSAWQGRFTPCLRASRKSLALYPALSSVGANRTAQKGTKQ"
BASE COUNT          287 a          389 c          376 g          261 t
ORIGIN      
        1 ccagtgctac ccgattgcca tcgatgggac gcagaagctg gtgcgcaacg gtcaatggca
       61 ggctgagcaa tggttagaac gtcgccgcca gagggccgag ggcgagcacg tccagcagta
      121 tgtctatgtg ctggaagcga atcgggtgct gcataatggg gtgacgctgc cgctgctgag
      181 tgaatttctc agctatggcg agggtgaccc ggacgatcac aaacaagact gtgagctgaa
      241 agccttctac cgcctggcgg cgcggctcaa agcctatttt ccacgcctgc ccattgtact
      301 cctgctcgac gggctctatc ccaatggccc gttgatggca ttaggtcgtc agtaccagtg
      361 gcagtttatg attgtcttgc ccgctaagtg tttgcccttg gtgtgggagg aggtcgaagc
      421 gctcaagccg cgcccgcctc actaccgcaa acaccagcac tggcacgggc ctcagcaaca
      481 gttcgggtgg gtcaacgaca tcacctctag ctatgagggg gaccgcaaaa gcctcctggt
      541 gcatggagtc ggctgtgaag aaacctggca agaagtcgat cctgccacca gcgagctgat
      601 cgacaagcag ccccagccta tgtggctgtc cagccagcgt ctgtgccacc acactgtcca
      661 tgagcgctgc aaccttggcg cgcgccagcg ctggggcatc gaagtgagca tgcaggtcga
      721 aaaacggcag ggttactgtt atgagcacgc cttctctcac cactggaatg ccatgcaagg
      781 ttatcattat ctgatgcgcc tagcgcacct gctcaatgcc ctggcattgg ccactaaacg
      841 ggtcgcaagc caagcgcacg ctgggcgtcc aggcgtttct gcgctttgtg cgcgagagct
      901 gtgcccatcc ctggctgcac ccggcgtggc tgcagcaact gcgtgcccat ctccggcaac
      961 tgcggctcga atagctgcca ccctctttga gatcagccca gtcgtctgcc gcaacaggcc
     1021 aaactcagcg tggcaaggac gctttacgcc ctgtctcagg gcatcccgaa aaagcctcgc
     1081 cctctacccc gctctcagct ctgttggggc taacagaact gctcaaaagg ggactaaaca
     1141 atgattgatg acagggggca gtggggaaaa cacaaagttg gccaactcat gcgtcagggc
     1201 tgcgggacaa aacgcaactc cccgagagta ggctatactc tttatcaggg ctcggcccat
     1261 gacgagtagc cggacaaaaa gtgcacataa gcagcttttt tcatctcatt ttc
//
LOCUS       DASQSL010000411         1053 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_154409, whole genome shotgun sequence.
ACCESSION   DASQSL010000411 DASQSL010000000
VERSION     DASQSL010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154409"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            219..833
                     /locus_tag="VE844_04165"
     CDS             219..833
                     /locus_tag="VE844_04165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00570.1"
                     /translation="MNSLNLARVGGGLAAILGGLLIVVGGLGGLLLAGFENRAAAAAT
                     GSYILFTILSLLGAILVLGGLVGLYARQSEQAGSLGLLGFLVAFLGTALAVGAFWAVT
                     FTEPAFAQVAPELLAQGPPGWLNFGFILSFALTSVGWLLFGVATLRAGVYTRAAAILL
                     IVGALISLVPLPLTEVILAVAIAWLGYELFMGRGDSAEQRARVR"
BASE COUNT          192 a          294 c          315 g          252 t
ORIGIN      
        1 acagtgctac acaggacaaa gcgagtttcc gagaagcccg tttgtcggaa actgggtttc
       61 cgcgaagaac ccttctcgga ttctcagtga atagggggac cctgtgacct agcgtaagta
      121 ttgcaccctg ggtgttgtct cgccccacac acatgcgcga cgttttgctt gatgagatca
      181 ttggctcgac aagactcact gcaaaggagc aaaacccgat gaacagcctg aacctcgcta
      241 gggtgggagg tggattggcg gctattcttg gtggcctgct aatcgtggtg ggaggcctcg
      301 ggggcttgtt gttggctggc ttcgaaaacc gcgccgccgc cgccgcaacg ggcagctaca
      361 tcctcttcac tatactgtcc ctgctcggcg caatactggt gctcggtggg ctggtcgggc
      421 tgtacgctcg ccagtctgag caagccggtt ctctagggct tttaggcttc ttggtggcct
      481 tcttgggcac ggcgttggca gtgggcgctt tttgggcagt aaccttcacg gaaccagcct
      541 ttgcgcaggt ggcccctgaa ctcctcgctc aaggcccccc agggtggttg aacttcgggt
      601 tcattctgtc gttcgcgctc acttctgtag gctggttgtt gttcggggtg gctacgctta
      661 gagccggggt ctacacgcga gcggctgcga tactgcttat agtcggtgcc ctcatcagtt
      721 tagtaccgct gccgctgacg gaggttatcc tcgctgtagc catagcttgg ctagggtatg
      781 aactcttcat gggaagaggc gattcagccg agcaacgcgc gcgagtgcgc tgactttccg
      841 agaacagcct cggctctttt catgcctccg agtttccgag aactcggttt agccgaagcc
      901 cagttgccga gaatgtactt aaccggaagc tcagtttccg agaaggctag ctctcggcag
      961 ctcggtggat agagctaacc ggcacttgag tcactaaagc gcttccgcta agtagtagcg
     1021 acctctcgga atcccagcct gcggcctcca acc
//
LOCUS       DASQSL010000412         1212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_154438, whole genome shotgun sequence.
ACCESSION   DASQSL010000412 DASQSL010000000
VERSION     DASQSL010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1212
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154438"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(316..>1212)
                     /locus_tag="VE844_04170"
     CDS             complement(316..>1212)
                     /locus_tag="VE844_04170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00571.1"
                     /translation="GVNEVFPQAEQRDDCFHALYELNKVRRRLEQRAYGAIAAEEEAH
                     HQLPKIPASDRKQRRCQRHRIARAHRHCQEAIVRFDRFEEAMREVQEGLECVDLEDGH
                     LRQAGEVKAMIEHAADSLQVLAPACHKVARYLRNRAAGLSRATGELNTRLGELAMTYT
                     LEAVALACMLWRWVFELQNDRRPWLRAEQHRQLLGAFAHLKYLLGPQLDALLDAVKAF
                     LDQRHRASSAIEGFNAALRPFLYVHKGVTQGFLELFRAYYNLRTRRWGPRQGTSAHQC
                     LTGQAVGDWLTLLGFPPSNTLH"
BASE COUNT          258 a          346 c          353 g          255 t
ORIGIN      
        1 agcaatggga gggatagcag ttttttggga aggagcaccc cttgtttgtc tttttccaat
       61 atgccttcag caatcagctt ctgcaccacg tagcgcaccg ctccttttga tttgtagccg
      121 agcaatttac acatctcccc atacgttggt aatcgtttgt ttttgttata aaaataccgc
      181 aacctggtga taataagcgg ggaccggtca aaatcctgag gttctgcttt acaccgatgt
      241 gcgaggacgg tcctgaacgg aagagggttc aggacgggat gatgctgccc gtttgaaagg
      301 cgttgagcct taggattagt gcagagtgtt cgagggcggg aagccgagga gcgtaagcca
      361 atcgcccacg gcttgaccgg tcaggcactg gtgagctgaa gtaccttggc gaggccccca
      421 gcgccgggtt ctaaggttat agtaggcgcg aaagagttcc aagaagcctt gtgttacccc
      481 cttgtgcaca tagagaaagg gacgcagggc cgcattgaac ccttcaatgg cgctggaggc
      541 ccgatggcgc tggtcaagga aggccttgac cgcatccaag agcgcatcca gctgaggacc
      601 cagcaaatac tttaggtgtg caaaagcacc gaggagttgc cgatgctgtt cggcccgtag
      661 ccagggacgg cggtcatttt gtagctcgaa cacccaccgc cagagcatgc acgccagcgc
      721 caccgcctca agagtgtagg tcatagccaa ctcaccaagc cgcgtgttca actcccccgt
      781 ggcccgcgat aagcccgcgg cccgattgcg caggtagcgt gccaccttgt gacaggctgg
      841 agcaaggacc tgcaaactgt ctgcggcatg ctcgatcatc gctttcacct cgccggcctg
      901 gcgaagatgg ccatcctcaa ggtcaacaca ctccagcccc tcctgtacct cacgcatggc
      961 ctcctcaaag cggtcaaacc ggacgatagc ctcttggcag tggcggtggg cgcgagcgat
     1021 tcggtggcgt tggcaccgcc gttgtttacg gtcgcttgcg gggatcttcg gtaactgatg
     1081 atgggcttcc tcttccgcgg cgatcgcacc gtaggcccgt tgctcgagcc ggcgccgcac
     1141 cttattgagc tcataaaggg catggaaaca atcatcgcgc tgctcggcct gcgggaaaac
     1201 ctcattgacc cc
//
LOCUS       DASQSL010000413         1043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_166410, whole genome shotgun sequence.
ACCESSION   DASQSL010000413 DASQSL010000000
VERSION     DASQSL010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1043
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166410"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            173..334
                     /locus_tag="VE844_04175"
     CDS             173..334
                     /locus_tag="VE844_04175"
                     /inference="COORDINATES: protein motif:HMM:NF024736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00572.1"
                     /translation="MEGDLRDDQGELIAPLLPSRKKRGRPRADDRRTLNGILGVLRSG
                     ARWKDLPKE"
     gene            388..702
                     /locus_tag="VE844_04180"
     CDS             388..702
                     /locus_tag="VE844_04180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00573.1"
                     /translation="MGADLAEIPRYTGPIRQAGLEPGLPRWQLRARQKGGEDIASGWK
                     GKGSTVHLLTEGHGLPLAFLVTAANVAEVTVGLKVVDRVRVPRPKGRPKQRPGRLAAD
                     KS"
BASE COUNT          238 a          274 c          327 g          204 t
ORIGIN      
        1 aagaaaaagt aaacgatatg aaaaaatatt tacctttcat actcatcaga gctattctcc
       61 tttttgcgac accggtaatt attggggcat ttttcctttc gtagaaccag tcccaaaatg
      121 attaaagatg gtctaaactt catcccgagt ctcgtgctgg gaggcttggg tgatggaagg
      181 agacctacgg gacgaccaag gggagttaat tgcgccactg ctgccctccc gcaagaagcg
      241 aggccgtcca cgagctgacg accgccggac cctcaatggc atcctcgggg tgttgcgctc
      301 cggcgcccgc tggaaagacc tgcccaagga gtagggcagt cgctctactg gccaccgacg
      361 cctccaggag gggcaggagc cagaggtatg ggagcagatc tggctgagat tcctcggtac
      421 actggaccaa tcaggcaagc tggactggag ccaggccttc cgagatggca gcttcgtgcc
      481 cgccaaaaag ggggagagga catcgcctct ggctggaaag gcaagggcag cacagtccat
      541 ctcctgacgg aaggccatgg cttgcccctg gcgtttctgg tgacggcggc caacgtggcg
      601 gaggtcactg tggggctgaa ggtggtagac cgggtgcggg tgccccggcc aaagggccgg
      661 cccaagcagc ggcccggccg tctggctgct gacaaaagct aggacagcgc ggagttctga
      721 caggggctgc gacgaggggg gattcaacct tccctacctt gccgagaatg acccaatggc
      781 cggggcaagc ctgggcgtcc cccagagacc cacgaggcca gcaagtatcg ctggaaggtg
      841 gagcggagtc acggctggct ggacaactgg cgtcggttgg tgactcggta tgactgctac
      901 acccaaagct atgttgcctt tctcaccatc gcctgtttta tggctgccct gtcaaggatt
      961 ttggattagg agatttttgg gactggttct tggatagtaa acgttaggag cagaaatatg
     1021 tccacatacg agcaggaaaa aca
//
LOCUS       DASQSL010000414         1446 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_44423, whole genome shotgun sequence.
ACCESSION   DASQSL010000414 DASQSL010000000
VERSION     DASQSL010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1446
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44423"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            32..985
                     /locus_tag="VE844_04185"
     CDS             32..985
                     /locus_tag="VE844_04185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008932293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HZC00574.1"
                     /translation="MQKLRAAVIGVGYLGRFHVQKFAALEDAGLVAVVDIDRIKAEDV
                     SRRVKAAAYTDYREILGHIDLVSIVVPTENHYPIARACLEAGIHVLVEKPMTRTLEEA
                     EHLIELAKSHGCVLQVGHLERFNPALLALRGTLNHPLFIESHRITQFRERGTDVSVVL
                     DLMIHDIDLILSMVDSPIVAIRPMGFPVLTEEIDIANARLEFANGCVAHVTASRVSRS
                     LMRKMRLFQPDSYISIDYLEHTIAICRRLYDQSRVRIVEEVRSFMQEDALMLEIRAFV
                     EAVKNGTPPVVSGEEGKRALAVALAITHAIRQKPVFQTGPV"
     gene            982..>1446
                     /locus_tag="VE844_04190"
     CDS             982..>1446
                     /locus_tag="VE844_04190"
                     /inference="COORDINATES: protein motif:HMM:NF012360.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-[acyl-carrier-protein]--UDP-N-
                     acetylglucosamine O-acyltransferase"
                     /protein_id="HZC00575.1"
                     /translation="MSGIHPTAIIDPSAALGGSIAIGPYAIVEAEVIIGDHCCIRAHA
                     VIKRYTHLGSRNQIHEHAVIGGDPQDLSFRPCISHVVVGDDNVLREGVTLHRATRAGN
                     ATRIGNHNFFMACAHVAHDCTVGDKVVLANGAALGGHVSVGDQAFISAFAAVH"
BASE COUNT          306 a          408 c          421 g          311 t
ORIGIN      
        1 gcggggcatt atccggtaag ggctaaccaa aatgcaaaag ctccgggccg cggtgatcgg
       61 tgtaggctat ctcggacgtt ttcacgtgca aaaatttgcc gcgcttgaag atgccggctt
      121 agtggccgtg gtcgatatcg atcggatcaa ggccgaggac gtgagcagac gagtcaaagc
      181 tgctgcctat acagactacc gtgagatctt aggccatatc gatctggtct ccatcgtggt
      241 gcctacagag aaccactatc cgatcgcgcg ggcctgcctg gaagcaggga tccatgtcct
      301 ggtggaaaag cccatgaccc gcacacttga agaggcagaa cacctcattg aactggcaaa
      361 gtcccacggc tgtgtactgc aggtgggcca tctggaacgg tttaatcctg cactccttgc
      421 gcttcggggc acactgaatc accccttgtt tattgaatcc catcggatca cccagttccg
      481 agagcgaggc accgatgtca gcgtggtact ggatcttatg atccatgaca tcgatcttat
      541 cctcagcatg gttgacagtc cgattgtggc gatccggcct atgggttttc cggtgctgac
      601 cgaagagatc gatatcgcca atgcccggct cgaatttgcc aatggctgtg tggcccacgt
      661 caccgccagc cgggtgagcc gcagcctcat gcgcaagatg cgcctgttcc agcccgacag
      721 ctatatctcc atcgattatc tcgaacacac gatcgcgatt tgccgcaggc tctatgacca
      781 gtcacgcgtt cgcatcgtcg aagaggtcag gagcttcatg caggaagatg cgctgatgct
      841 ggagatccgg gcctttgtcg aggctgtgaa aaatggaaca ccgccggtgg tatccgggga
      901 agagggcaag cgggcattgg cagtggccct ggctatcacc cacgcgatcc gccaaaaacc
      961 tgtgttccaa accgggccgg tatgagcggg atccatccta cggcgatcat tgacccttcg
     1021 gcagcgctgg gagggtccat agcgatcggc ccctatgcca tcgtcgaggc cgaggtcatc
     1081 attggcgatc actgctgcat tagggcccat gcggtgatta aacgctacac ccatcttggg
     1141 agccgcaatc agatccatga acacgccgtg atcggcggtg atccacagga tctctcgttt
     1201 aggccctgca taagccacgt agtggtcggc gatgataacg tgttgcggga gggtgtcacc
     1261 cttcaccgcg ccacccgagc aggcaacgcc acccgcatcg gcaatcataa tttctttatg
     1321 gcctgtgccc atgtagccca cgattgcact gtgggcgaca aggtggtact ggccaacggt
     1381 gctgcccttg gaggtcatgt atcggtgggc gatcaggcgt ttatctcggc gtttgcagcg
     1441 gtgcat
//
LOCUS       DASQSL010000415         1246 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_154444, whole genome shotgun sequence.
ACCESSION   DASQSL010000415 DASQSL010000000
VERSION     DASQSL010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1246
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154444"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..126
                     /locus_tag="VE844_04195"
     CDS             <1..126
                     /locus_tag="VE844_04195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015213505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HZC00576.1"
                     /translation="TLRQRLSRLVRETLSFSKKLTHHIGAIKYFICHDNLTRTAA"
     gene            225..1166
                     /locus_tag="VE844_04200"
     CDS             225..1166
                     /locus_tag="VE844_04200"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00577.1"
                     /translation="MPTLVWLYLTALLYYRTSGSCVALAEALRSVSHDRLTRMLQGDW
                     SGHTLLDVACRTLFVWERGFLIIDDTVIPKPYATGIEGLAWVFSSQERRPVYGFSLVL
                     LVWTDGRLRVPLGVRLWRKGGPSKYERALELLSHARNHLRCRPAYVLFDAWYPSKALL
                     KRIRDYGWYFVCRLKKNRRCHGHAVRHHRRHPYWTAMGWLSGGLKVLVVRYGAKYYAT
                     NRLTLSAAEVRRLYRVRSQIEEVIRVCKDQLGLTGCQARSERAQMHHLACCLVAFCVL
                     ERERQAQQLSVYKLKQQLSFQGRSLVLPTLEQLRSAA"
BASE COUNT          242 a          376 c          357 g          271 t
ORIGIN      
        1 acgttgcggc agcgcctctc gcgtctggtc cgtgaaacat tgtcattctc taagaaactg
       61 acccatcaca tcggtgcgat caagtatttc atctgccacg acaatctcac gagaaccgca
      121 gcatgacctg tgtagcacta ccctctaaat acctatcaga ggttacgcag aggcgatgag
      181 ataggataga gtttccatcc aaccatcacg aaggagggaa ctctatgcca acgctggttt
      241 ggctctacct caccgcactg ctctattatc gcacatcggg cagctgcgtg gccctggctg
      301 aagcgctaag aagcgtgtcg catgaccgct tgacgaggat gctgcagggt gattggtccg
      361 ggcacacact cctggacgtc gcttgtcgca cgctcttcgt ctgggaacga ggctttctga
      421 tcatcgacga tacggtgatc ccgaagccct atgcgacggg catagagggg ttggcctggg
      481 tcttctccag ccaggagcgc agacctgtat atggcttctc cctggtccta ctcgtctgga
      541 cggatggcag actccgggtc ccgctgggcg tgcggctgtg gcgcaaaggg gggccctcaa
      601 aatatgagcg ggccttggag ttgctcagcc atgcccgtaa tcacctgcgc tgtcgcccgg
      661 cctatgtgct ctttgatgcc tggtatccct cgaaagccct gctcaagcgc attcgtgact
      721 atggctggta ttttgtctgc cgtctcaaga agaatcgtcg atgccatggg cacgcggtcc
      781 gtcaccaccg gcggcacccc tactggacgg ctatgggttg gttaagcgga ggcctcaaag
      841 tgctggtggt cagatacggc gccaagtact acgccacgaa tcgcctcacg ctctcggccg
      901 cggaggtacg ccgcctctat cgcgtccgct cacaaattga ggaagtgatc cgcgtctgca
      961 aggatcaact tggcctcacc ggctgtcaag cccgctccga gcgggcccag atgcatcatc
     1021 tggcctgttg tctcgtcgcc ttttgtgtcc tggagcggga acgacaggcg cagcagctca
     1081 gcgtctacaa actcaagcag cagctcagtt tccaaggccg ctctctggtg cttccaacgc
     1141 tcgagcagct gagaagcgct gcgtaacctc tgcgtgctca taaaaagtcc actcgtcggc
     1201 gcgcccgtct cggttacggt ccgactcgac gcggagcagg gtgttg
//
LOCUS       DASQSL010000416         1316 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_154448, whole genome shotgun sequence.
ACCESSION   DASQSL010000416 DASQSL010000000
VERSION     DASQSL010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1316
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154448"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..236
                     /locus_tag="VE844_04205"
     CDS             <1..236
                     /locus_tag="VE844_04205"
                     /inference="COORDINATES: protein motif:HMM:NF024586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HZC00578.1"
                     /translation="GQVLREQTAHLVGLRAFHENVVNSMNSGLLITDMSGRVVSANRA
                     AERILLFSPDSSLDWFAQEVFGFLKIAEIVQKA"
     gene            345..1163
                     /locus_tag="VE844_04210"
     CDS             345..1163
                     /locus_tag="VE844_04210"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZC00579.1"
                     /translation="MHGLIFNFQDITAIRAMEVEIKRGEQLAAVGRLSAAIAHEIRNP
                     LASISGSIQLLRSALALDGSNQRLMDIIAREIERLNTIITDFLAYARPRPLQYAEVDI
                     HKLISGTLDLLRNGLPEGGAVTVRTEFAPNVPTMMIDPQGLRQVIWNLCLNAVEAMRH
                     QGTLTIRTVVQSPSKQPYRSYHESRPATQELVIEVADTGPGMPPEVKEKIFEPFYSTK
                     SGGTGLGLATVDRIIYNHKGRMAIESQLGHGTTIRIHLPLLSTIVEAGAIHDDY"
BASE COUNT          295 a          383 c          352 g          286 t
ORIGIN      
        1 cgggtcaagt gctgcgggag caaaccgctc acttggttgg gctccgtgcc ttccacgaaa
       61 atgtcgtcaa tagcatgaac agtggactgc tcatcacgga tatgagcggg cgagtcgtct
      121 ccgcgaaccg tgcggcagaa cgcatcctcc tgttttcccc agattcttcc ttagactggt
      181 ttgcccagga ggtcttcggc tttctcaaga ttgcggagat tgtgcaaaag gcttaagacg
      241 tagaccagga acttaaccgg actgaagggt tctttgagcg ccgcgacggg cagaagatca
      301 tcttaggcat ctcctattcg cctctacgcg atgaaaacgg cacggtgcat ggcctcattt
      361 ttaatttcca ggatattaca gccatccgcg ccatggaagt tgagatcaag cgcggcgagc
      421 aactggctgc ggtcggccgc ctgtcggccg ctattgccca cgaaattcgc aaccccttgg
      481 cctcgatcag cggatccatc cagctcctgc gctctgcgct cgctctcgat ggatcgaacc
      541 agcggttgat ggatatcatc gctcgtgaaa tcgaacgcct taacacgatt atcaccgact
      601 ttttggccta tgcccggcca cgaccgttgc agtatgcaga ggtggatatt cacaaactga
      661 tctccgggac tttggatctg ctccgcaacg gcttgcctga ggggggagcg gtgaccgtac
      721 gcaccgagtt cgcacccaac gtccctacaa tgatgatcga tcctcaggga ttgcggcaag
      781 tgatctggaa tctctgcttg aatgccgtgg aagctatgcg ccatcaggga acactgacga
      841 tccgtaccgt ggtacagtcc ccttcgaaac agccttatcg ctcataccat gaatcgcgcc
      901 ccgctactca ggagctggtc atcgaggtgg ccgatacggg gcccggaatg ccccctgaag
      961 tcaaagagaa aatctttgag ccgttctaca gcacgaagag cgggggcaca ggtctaggtc
     1021 tagcgaccgt ggaccgcatc atatataatc ataaaggtcg aatggccatt gagagccagt
     1081 tgggacacgg cacgacgata cgcattcacc tgcccctcct ctcaacgatc gtggaggcag
     1141 gcgctatcca cgatgattac tagaagccag ttcataacca cctacgctgc gccggtcctt
     1201 cgacaagctc gggtcggagg cgcaagaatc attcgtagtg cgcctatcgc accgcgagca
     1261 tagggtgatg aaacggctgc cagcattcct ctcccccctc tatcacttcg tcatca
//
LOCUS       DASQSL010000417         2922 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_84124, whole genome shotgun sequence.
ACCESSION   DASQSL010000417 DASQSL010000000
VERSION     DASQSL010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2922
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84124"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1392)
                     /gene="nuoG"
                     /locus_tag="VE844_04215"
     CDS             complement(<1..1392)
                     /gene="nuoG"
                     /locus_tag="VE844_04215"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008932001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_process: GO:0006120 - mitochondrial electron transport,
                     NADH to ubiquinone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HZC00580.1"
                     /translation="MSEDLVTIEVDSSPLKARKGVMLIEVTDAAGIYIPRFCYHKKLS
                     IAANCRMCLVEVEKAPKPLPACATPVIEGMKVWTRSALAQDAQRSTMEFLLINHPLDC
                     PICDQGGECELQDLAMGYGSDVSRYAEKKRVVKDKNIGPLVQTDMTRCIHCTRCVRFG
                     DEIAGLRELGATGRGEHMEIGTYIEKAMSSELSGNVIDLCPVGALTSKPFRYTARAWE
                     LRQHAGIAPHDSIGSNIYLHVQGNRIKRVVPRENEAINEVWIADRDRFSYEGLYSADR
                     LTVPRIKANGRWQEVDWDRALGFAIDGLKRVLGAQGPGQIGALASPQATVEELYLLQK
                     FMRGLRSNHIDHRLRQLDFTDQAEAPLFPWLGQTLTDLERVDAALLIGSYVRKEQPIA
                     NHRLRKAALRGGRVMVVNPLDHDFNLPISDKLIVPASHMVWALAGIAKALLDRSPEVG
                     FADPGMADLLKNVE"
     gene            complement(1397..2698)
                     /gene="nuoF"
                     /locus_tag="VE844_04220"
     CDS             complement(1397..2698)
                     /gene="nuoF"
                     /locus_tag="VE844_04220"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020396156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HZC00581.1"
                     /translation="MLNQVCFKTLEFPEPWTLENYLKLGGYGAWKKILADTIPKQIII
                     EEVKASGLRGRGGAGFPAGLKWSFMPREPRGQHYIVCNSDESEPGTCKDRDILRFNPH
                     ALIEGLAIAGYAIGATVGYNYLRGEFMDEPYERFEAALKEAYAEGLLGKNILRSGVDF
                     DLYSYLGAGAYICGEETALLESLEGKKGLPRFKPPFPANYGLYGRPTTINNTETLASV
                     PDIIRKGSKWFAELGKPPNNGGTKIFSVSGHVERPGNFEVPLGIPFVRLLDLAGGMWQ
                     GRKLKAVIPGGSSVPVLPGEIMMGLTMDYDSIAKAGSILGSGAVIVMDETTCMVKVLR
                     RIARFYYAESCGQCTPCREGTGWLYRMLTRITEGQGAPEDLEKLDSVASKIEGRTICA
                     LGDAAAMPVRSFIKHFRHEFEYYIEHGHSLVEGSDRVSKAA"
     gene            complement(2707..>2922)
                     /locus_tag="VE844_04225"
     CDS             complement(2707..>2922)
                     /locus_tag="VE844_04225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008316093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase subunit E"
                     /protein_id="HZC00582.1"
                     /translation="CMLRGAEELVQHIEKKLKIKTGNSTSDGRIYLKQEEECLAACCG
                     APMMMVDHIYYENLTVEKIDAILGALP"
BASE COUNT          592 a          913 c          807 g          610 t
ORIGIN      
        1 ctcgacattc tttaacaggt cggccatgcc gggatcggcg aaccccacct ccggggaccg
       61 atcgagcagc gccttggcaa tgccggccag cgcccagacc atgtgcgatg cgggcacgat
      121 aagcttgtcg ctgatcggga gattgaaatc atgatcgagc ggattgacca ccatgacccg
      181 gccaccgcgc aaagccgcct tgcgcaggcg gtgattggcg atcggctgtt ctttgcggac
      241 ataggaaccg atcaacaagg ccgcatccac ccgctctaaa tcggtgaggg tctgccctag
      301 ccaggggaag agcggcgcct cagcttgatc ggtaaaatca agctgccgta agcgatgatc
      361 gatatggttg cttctcagcc cacgcatgaa cttctgcaac aggtaaagct cctccacggt
      421 ggcctgaggg gaggccaggg caccgatctg cccgggaccc tgggccccga gcacgcgttt
      481 caggccgtct attgcgaaac cgagcgcccg atcccagtcg acctcctgcc agcggccatt
      541 ggccttgatc cgggggacgg tcagacgatc cgcactgtag agtccctcgt agctgaaccg
      601 gtcccgatcg gcgatccaaa cctcgttgat ggcctcattt tcccggggca ccacgcgctt
      661 gatgcggttg ccctggacat gcagatagat attggaaccg atcgaatcgt ggggggcgat
      721 cccagcgtgc tggcgcaatt cccaggcccg cgccgtgtag cggaagggtt tcgaggtcag
      781 cgcgccgacc gggcagagat cgatgacatt acccgacagc tccgagctca tggccttttc
      841 gatataggtc ccgatctcca tgtgctcccc gcgtccggtg gcgccgagct cccgaagccc
      901 tgcgatctca tcgccaaagc gcacgcagcg ggtacagtga atacaacggg tcatatcggt
      961 ctggaccagg ggcccgatat tcttatcctt gactacccgc ttcttctccg cgtagcggga
     1021 gacatcactg ccatagccca tggccaggtc ctgcagctca cactcgcccc cctggtcgca
     1081 gatcgggcaa tccagggggt gattgatgag cagaaactcc atcgtcgatc gctgtgcatc
     1141 ctgggccaag gcagaacggg tccatacctt catgccttca atgacaggtg tggcacaggc
     1201 gggcaggggt tttggtgcct tctccacctc gaccaggcac atccggcaat tggccgcgat
     1261 cgataatttc ttgtgataac aaaaacgcgg gatatagatg cctgccgcat ccgtcacctc
     1321 gatcagcatc acgcccttgc gtgccttcaa gggactgcta tccacctcaa tagtcactaa
     1381 atcttcgctc atgcgctcaa gctgccttac tgactcgatc agagccttcg accaggctat
     1441 ggccatgctc gatgtagtat tcgaactcgt gccggaagtg ttttatgaag ctgcgcaccg
     1501 gcatggccgc agcatccccc agcgcgcaga tcgtgcgccc ctcgatcttg ctcgcgacac
     1561 tgtccaattt ctccagatct tcgggggcgc cttgaccctc ggtgatccgc gtcagcatcc
     1621 ggtacagcca gcccgtccct tcccggcagg gcgtacactg gccgcacgat tccgcgtagt
     1681 aaaaccgggc gatccgccgc aataccttga ccatgcaggt ggtctcgtcc atcacgatca
     1741 ccgcccccga gcccagtatc gatcccgctt tagcgatgga gtcatagtcc atggtgagcc
     1801 ccatcatgat ctcgccgggc agcaccggca ccgacgagcc gcccgggatc acggccttga
     1861 gcttgcgccc ttgccacata cccccggcga gatcaagtaa ccgaacaaag gggatcccaa
     1921 ggggcacctc aaaattgccc gggcgctcga catgaccgct gaccgaaaag atcttggtgc
     1981 cgccattgtt agggggtttg ccgagctcag caaaccactt gctgcctttg cggatgatgt
     2041 ccggcaccga ggctaaggtt tcggtgttgt tgatggtcgt gggccgaccg tagaggccat
     2101 agttggcagg aaagggcggc ttgaacctcg gtagaccctt tttgccctcc agtgattcca
     2161 aaagggcagt ctcttcaccg cagatatagg cccccgcacc gagataggaa tagagatcaa
     2221 aatcaacacc ggatctcaag atgtttttgc ccaatagccc ttccgcatag gcttctttga
     2281 gggccgcctc gaagcgctcg tagggttcat ccatgaactc accgcgcagg tagttgtagc
     2341 ccacggtggc gccgatcgcg taccccgcga tcgccaggcc ttcgatcaag gcgtgtggat
     2401 tgaagcgcag gatatcccga tccttgcagg tccccggttc actctcatca gaattacaga
     2461 cgatgtaatg ctgaccccgt ggctccctgg gcataaagct ccatttgagt cccgctggaa
     2521 acccagcacc gccgcggccc cgcaatcccg aagccttgac ctcctcaatg atgatctgtt
     2581 tcgggatcgt atccgccagg atcttcttcc aggccccata gccaccgagc tttagataat
     2641 tttcgagggt ccagggctcg ggaaactcca gcgtcttgaa acagacctga ttgagcaatg
     2701 gatcattcat ggtagggcac ccagtatcgc atcgatcttt tcgaccgtga ggttctcata
     2761 gtatatgtgg tccaccatca tcatgggcgc accgcaacag gcggccagac attcctcttc
     2821 ttgtttgaga tagatgcgtc cgtcggacgt gctgttgccg gtctttatct tgagtttctt
     2881 ctcgatgtgc tggaccaatt cttcggcgcc gcggagcata ca
//
LOCUS       DASQSL010000418         1313 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_154461, whole genome shotgun sequence.
ACCESSION   DASQSL010000418 DASQSL010000000
VERSION     DASQSL010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1313
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154461"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..327)
                     /gene="trfA"
                     /locus_tag="VE844_04230"
     CDS             complement(<1..327)
                     /gene="trfA"
                     /locus_tag="VE844_04230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013221953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid replication initiator TrfA"
                     /protein_id="HZC00583.1"
                     /translation="MSDLDKALQSLGETIASKQERERANTPKEPAQVIRLPLWPESAR
                     GAPNDILRSALFAAIQGKGRAFLKQRLIVAYDGNQIKYTGEQLDQSDLDVWEHVLHLA
                     RQHPLGT"
     gene            complement(386..634)
                     /locus_tag="VE844_04235"
     CDS             complement(386..634)
                     /locus_tag="VE844_04235"
                     /inference="COORDINATES: protein motif:HMM:NF042903.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HZC00584.1"
                     /translation="MKKARAQLGTTGVFKAPSTVQPISTTEKRPDRVGRTAIPFWVPV
                     AARKQLRLLAAEMDTTQQELLTIALNDFFTKHGKPPIA"
     gene            complement(631..1275)
                     /gene="parA"
                     /locus_tag="VE844_04240"
     CDS             complement(631..1275)
                     /gene="parA"
                     /locus_tag="VE844_04240"
                     /inference="COORDINATES: protein motif:HMM:NF041546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family partition ATPase"
                     /protein_id="HZC00585.1"
                     /translation="MKTLVILAQKGGSGKTTLAVHMAVCAARQKRRTALIDIDPQSSA
                     FNWNESRDEGRKLDAAKAEAGQIPALLQQAKAGGIDLAIIDTAPHSDSAAAIAAQYAD
                     LVLIPCRPARFDLDAIASTVQIATVAKKSATVVINAAPRGKLAEEARAALERQGITVI
                     DTVLHQRAAYSHAVIDGRSVHEYEPDGKAAAEIDELYNHLTRLLGYKQARGKAA"
BASE COUNT          244 a          386 c          358 g          325 t
ORIGIN      
        1 cgtgcctaaa ggatgctgcc gcgccaagtg caagacatgc tcccatacgt caaggtctga
       61 ttggtctaat tgctccccag tgtatttgat ttggttgccg tcataggcga cgatcaggcg
      121 ttgcttgagg aacgcccgcc cctttccctg aatggcggca aagagtgcag accgcaaaat
      181 gtcattaggc gcaccccttg ctgactccgg ccataaggga agacggatca cttgggcggg
      241 ttctttcggc gtgttggccc tctcgcgctc ctgcttggac gctatcgttt cacctaggct
      301 ctgcaacgct ttgtcaaggt cgctcatcct ctctcccgtt atatatcacc gtataaccgg
      361 gttatacggt tctagggcag actcgctacg caatcggggg ttttccatgc ttcgtgaaaa
      421 agtcattcag ggcaatggtc aaaagttcct gctgtgttgt gtccatctcc gccgccaaaa
      481 ggcgaagctg tttccgtgca gcaacgggaa cccaaaacgg tatcgccgtt cgccctaccc
      541 tgtcgggccg tttctcggtc gtgcttatcg gctgaacggt cgaaggtgct ttaaaaaccc
      601 ctgttgtgcc tagctgcgct cgtgccttct tcacgctgct ttacccctcg cttgcttata
      661 acccaataac ctggttagat ggttatatag ttcgtctatc tctgctgccg ccttgccgtc
      721 tggctcgtat tcgtgaacgc tgcgcccgtc aatgacggcg tgactgtagg cggcacgctg
      781 gtgcaaaacg gtatcaataa cggtgattcc ctgacgctcc aaggccgctc gcgcttcctc
      841 cgccagcttc ccgcgtggcg cagcattgat gaccaccgta gcggatttct tggctaccgt
      901 ggcaatctgc acagtagacg ctatggcgtc caagtcgaac cgggcagggc ggcagggtat
      961 caaaaccaag tctgcatact gcgccgcgat tgccgccgcg ctgtccgagt gcggggccgt
     1021 gtcaataatg gcaaggtcaa ttcccccggc cttcgcttgt tgaagcaagg caggaatctg
     1081 cccggcctct gccttggctg cgtccagctt acgcccttcg tcgcggcttt cattccagtt
     1141 gaaggcgctg ctctgcgggt caatgtcgat taaagccgtg cggcgcttct gacgggccgc
     1201 gcacacggcc atatgaacgg ccagggtggt tttaccgctg ccgcctttct gcgcaaggat
     1261 aacaagggtc ttcatgagtt ctcgtcagtt gtgaccatat aaccgggtaa taa
//
LOCUS       DASQSL010000419         1295 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_166437, whole genome shotgun sequence.
ACCESSION   DASQSL010000419 DASQSL010000000
VERSION     DASQSL010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1295
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166437"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(252..1076)
                     /locus_tag="VE844_04245"
     CDS             complement(252..1076)
                     /locus_tag="VE844_04245"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC00586.1"
                     /translation="MAKLNLSRLEKPLRFDRISGLDTEQLDELEQRVSELLEKPWDTG
                     TGRPRELSLREALVVTSGYTRHNITEQVWADIFDVDQSTISRYITFLTPLIEQATAEF
                     RPSAEQAAEATRGAIALVDGTLWPCWSWAGERELWAGKYKTTGHGSLLVTTLAGRLTF
                     VSEPVPGNQHDMAKLKASECEMILKRAGDVIGDKGFIGTDYIITPVRKPEGRDLYMCE
                     HDYNNQISSLRAPVERAVANLKTWRILFTDYRRPLQTFLSSFRAAVGLYFFKESFS"
BASE COUNT          252 a          388 c          378 g          277 t
ORIGIN      
        1 gatgctgacg acgcgcgaga tcatcccgta gtcggccgca ccgccggtga ggagtcgttg
       61 gccggatcgt cagtaaggcg tcgcaggtca ccgccgtcgg cggacgtggc gtagaggtcc
      121 aggctcctcc caaggtcgct ctcgaagacg acgaatgcgc cgtcggcaga ccaggcgggt
      181 cgatgttccg tcgcgtcgtt ggaggtgagc tgccggagat ccgttccgtc ggcgtccacc
      241 gtgtaggtgg cttatgaaaa actctccttg aagaagtaca gcccgacagc tgcccggaac
      301 gaggacaaga aggtctgcag cggccttctg taatccgtaa aaagaatccg ccatgtcttc
      361 aggttggcga cggctcgctc gaccggcgca cgcagcgagc tgatctgatt attgtagtca
      421 tgctcgcaca tgtacaggtc acggccttcc ggcttgcgca ccggagtgat gatgtagtca
      481 gtcccaatga atcccttgtc accaatcaca tcgccggccc gcttgaggat catctcacac
      541 tctgaagcct ttagtttggc catgtcatgc tggttgccgg gcaccggctc ggacacgaag
      601 gtaagacggc cggcgagagt tgtgacgagc aaagacccgt gacccgttgt cttgtatttc
      661 ccagcccaca gctcacgctc accagcccag gaccagcatg gccataaggt gccgtctacc
      721 agggcgatcg cgcccctggt agcttctgct gcctgctcgg cagaaggcct aaactcagcg
      781 gtagcctgtt cgatcagcgg cgtaaggaag gtgatgtagc gcgagatcgt ggactggtcc
      841 acatcaaaga tgtccgccca cacctgctcg gtgatgttat ggcgcgtata cccgctggtg
      901 acgacgagtg cctcccgcag actgagctcc cttgggcggc ctgtgcctgt atcccatggc
      961 ttctcgagta gttcgctgac cctctgctcc agctcgtcga gttgctcagt gtccagtcca
     1021 gatatacgat cgaaccgcaa cggcttctcc agtcgtgaga ggttgagttt tgccacctcc
     1081 tttctatcgg ctggagaagc cgttgcccgt caattgatgc agcgtgtcgc agattttttg
     1141 acaatgaccc ctgactaaca acaactgggt tctgcataag cctcaaggtg tgggaagctg
     1201 cagatcgacc atcgtatccg cgtggcggtg cacgattttc caggctccca gataccgtcc
     1261 atggccttca cccataagcc aggggctcgg cttcc
//
LOCUS       DASQSL010000420         2068 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_71954, whole genome shotgun sequence.
ACCESSION   DASQSL010000420 DASQSL010000000
VERSION     DASQSL010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2068
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71954"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(117..1463)
                     /locus_tag="VE844_04250"
     CDS             complement(117..1463)
                     /locus_tag="VE844_04250"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00587.1"
                     /translation="MIVPIVAIPPSIELGLAPYRDLFPRIETYQHIKEYCTGLVVLEK
                     PSINPLAACLIDGPAQSSINKALTRSPWSGDALNERRLERIKPYHRGKGLTIGIIDST
                     FSHHPRGEKKIYGVYRYWDYVNGCYTYAMQLVTAAIATGERCDGFDYRIYHRFHQQAE
                     LAYLEHTRLPPDEPDRGKWLQRLIELLTYELHRRQHQTKPQLAAALIEQMAVSEVAPE
                     VYTVDSALFAPVMIEAIENQGKPWLADSEKTRLVFWQGQTLNCETFAQSRPDQAYRPV
                     TLNRHGQEKTFWVFSCVVRIKKYGKVRLAVIYDQPDRQGKPIYCFTRMLTWNAQKIVQ
                     VRCHRWDIEPLHEQIKQFLGAEDSQLQTEAGVRRHLTLVFVVNSLLKSLDLSQPIGDL
                     SMAEFQNVSPTFGQRCRRILLEVFHDLIQTIARWLKENQMTPSQIFEILFNRLLYV"
     gene            1558..1914
                     /locus_tag="VE844_04255"
     CDS             1558..1914
                     /locus_tag="VE844_04255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00588.1"
                     /translation="MYFAYAVYGLGPIEAHQLFELYRRRFGIETSYRQLHQVRARTSS
                     RNPALRLVLVGLALLIVNLWVLLRRTWVQVTRYGGRVRIVELTLERIADALVDNLKQL
                     LGVIPVFQVKAVLHAT"
BASE COUNT          450 a          583 c          539 g          496 t
ORIGIN      
        1 tagaaattta tgtatgcgga agacttgaag acactgggta atatgggcaa ggtcgtgctg
       61 gtactcatgg gcatgacgat cgccctaatt acacgacttt ttcacatagc aacaactcaa
      121 acgtagagta ggcgattgaa aaggatttca aagatctggc tcggcgtcat ctggttttcc
      181 ttcagccacc gggcaatggt ttgaatgagg tcatggaaaa cctccaacag gatgcggcga
      241 caacgttgac caaacgtggg cgacacgttt tggaactcgg ccattgacag atccccaatg
      301 ggttgactca ggtccaagga tttcagaagt gaattcacca caaacaccag cgtcaggtgc
      361 cgccggacgc cagcttcggt ttgcagttga ctgtcttccg cgccaaggaa ctgtttgatc
      421 tgctcatgca acggttcaat gtcccaacga tgacagcgca cctggacgat cttctgggca
      481 ttccaggtta acatccgggt aaaacaataa atcggtttgc cctggcgatc cggctgatcg
      541 tagatgaccg ccagccggac cttgccatat ttcttgatgc gcacgacaca gctaaagacc
      601 cagaacgtct tctcctgacc atggcggttg agcgtcactg gacgatacgc ctgatcgggc
      661 cgagactggg cgaacgtttc acagttgagg gtctgcccct gccaaaatac caaccgcgtc
      721 ttctcgctat cagctagcca cggcttgcct tggttctcga tagcctcaat catcaccggc
      781 gcaaataagg cgctatcgac cgtgtaaacc tctggggcca cttcggagac ggccatctgc
      841 tcaatcaacg ccgccgccag ttgcggcttc gtttgatgtt gtcgccgatg cagctcatag
      901 gtcagcagct cgatcaaccg ctgtagccat ttccctcgat cgggctcatc cggcggcagc
      961 cgggtgtgct ccaaataggc caactccgct tgctggtgaa accgatggta gatccgataa
     1021 tcaaacccat cacagcgctc ccccgtggcg atggccgccg tcactaactg catcgcatag
     1081 gtataacacc cattgacgta atcccagtac cgatagaccc catagatctt cttctcccct
     1141 cggggatgat gactgaaggt actgtcgata atcccgatgg ttagcccctt tccccggtga
     1201 tatggcttga ttctctccaa ccgccgctca ttgagggcgt ctcccgacca cggcgaccgt
     1261 gtcagcgcct tgttgatcga gctttgggcg ggtccatcga tcaaacacgc tgccagtggg
     1321 ttgatactcg gtttctccag caccaccaac ccagtgcagt attccttgat gtgttggtac
     1381 gtctctatcc ggggaaacaa atctcggtac ggggccaacc cgagctcgat gctgggtggg
     1441 atcgctacga tgggcacaat catctccttc ctctccgtct ctcactggaa tcgaacccca
     1501 tcatagacac tcacggctat ctttcgccag cccagttcac ccttaagtga aaaagtcgtg
     1561 tacttcgcct acgccgtcta tggcttgggg ccgatcgagg cgcatcaact ctttgagttg
     1621 taccggcggc gcttcgggat cgagacgagt tatcggcaac tgcatcaggt gagggcgcgc
     1681 accagttcgc gcaatcccgc cttgcgattg gtgttggtcg ggttggcgct gctcatcgtc
     1741 aatctttggg tactgctgcg ccggacgtgg gttcaggtaa cccgctatgg tgggcgcgtg
     1801 cgcatcgtcg agttgacgct cgagcgaatt gcagatgcct tggttgataa cctcaagcaa
     1861 ttgctcggag ttattcccgt tttccaggtc aaggcggtac ttcatgctac ttaagctatt
     1921 tcgtgatcta ctgattatga atagttatag gctaatatac gtccgtttgt caattaacca
     1981 ggcaatagct gtgagcaact ctcgaaatgt ccagacgtga ttggtcaacc cggccgccat
     2041 ggcgggggta cattgcctcc acctgggt
//
LOCUS       DASQSL010000421         1022 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_180993, whole genome shotgun sequence.
ACCESSION   DASQSL010000421 DASQSL010000000
VERSION     DASQSL010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180993"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(76..878)
                     /locus_tag="VE844_04260"
                     /pseudo
     CDS             complement(76..878)
                     /locus_tag="VE844_04260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611868.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
BASE COUNT          185 a          327 c          267 g          243 t
ORIGIN      
        1 tgctctactc accgatgtag ccattgcaac tcctcaggcc cgtatccctg gagttaacta
       61 gggcatgttt gcaaactaca accataggag ggttgccgct attacccaca tcgcccgata
      121 attggcacct cgcttctcat acctggtagc tagccgccgg aactgcttca gcgggttgat
      181 tagccgctcc accaggttac gctgcttgta gacctctcga tcaaaaggcc ctttccggca
      241 ctcattgcgt tagcgtggga tagtggttct gattccatgc tggcgggcat accgccggat
      301 ggcccggctg ctgtagccct tgtctccgac cacccgctgc ggtctcagcc ttggtctgcc
      361 cttaatgcct ttcaccgccc cctgggccat caactggggg aacaggggag cttcatggcg
      421 ctggcctggg gttagcatca gggttatcag cttgcctccc ccttcggccc gtagctgtac
      481 tttggtgctg aaacctcctt ggctgcggcc taaagcctcg ccctctgggt tttccccctg
      541 gctccgccag cgtgctgatg agcccgcacc atcgtgccat ccacataatg gagttcccag
      601 tttaccttcc cctggacatt ggcctgctgc tgtaccgcca tcaggactcg gtcccacaga
      661 ccattctggc gccaccgata gcaccggctg gctacagtgc gccagggacc gtagcgctcc
      721 gggaggtccc accagggcgc tccagtgcgc agcacccaga gaatgccatt aatgatggtg
      781 tgatgatcct tacccggcct tccagtagtt ggcttttggg gaggcaataa gggccgtagt
      841 tgttgccact gctgatcggt cagatcacct cgtcccatag cctctacccc ctccgctttt
      901 ggcagagagt ataactaccc ttttaaagtt tgcaaacagg ccctagctgt atttcctccc
      961 atagcgcaac aaaatccggg ttccctagcg aagcttgcct ggctggtaga gctaggggac
     1021 ag
//
LOCUS       DASQSL010000422         1510 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_140493, whole genome shotgun sequence.
ACCESSION   DASQSL010000422 DASQSL010000000
VERSION     DASQSL010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1510
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140493"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..186)
                     /locus_tag="VE844_04265"
     CDS             complement(<1..186)
                     /locus_tag="VE844_04265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00589.1"
                     /translation="MIPIDNLRPGSRPHPLASHNMSQRIVQNTYPEGLPDKPGVQVQY
                     HKPATARAVPVHGIEALL"
     gene            220..1140
                     /locus_tag="VE844_04270"
     CDS             220..1140
                     /locus_tag="VE844_04270"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HZC00590.1"
                     /translation="METVIRNATVVTGDVGRTVLYDHALAVRDDRIDAVGPSEEIIAA
                     YPEADIINGRGKAIFPGLINCHTHLLATLDRGLLEDFGFPTRLRFPVTAHSLLTKEEH
                     QVMAVLGALEALRSGTTSLLEISGNVAMYASPLERTGLRLVLAENINDVDESGVREGV
                     CKFSNKKLDSGLQRSADLIEKWHSTSEGRVTCFVAPHAPETCSPQLLKKSRDLAEKYG
                     TGYTIHLSQSRIELEVVKRTRSVSPTHYLFANDFLGPRLVAAHCRYVDASEIALLGQM
                     AVGISNNAAIAARLGPFGPRCFSSSPKTLL"
     gene            complement(1340..>1510)
                     /locus_tag="VE844_04275"
     CDS             complement(1340..>1510)
                     /locus_tag="VE844_04275"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rid family hydrolase"
                     /protein_id="HZC00591.1"
                     /translation="VKVTSFVTDLREAPASAEVRRKYFAGAFPASTQVQVAALGTPDL
                     KIEIEAIAVLPD"
BASE COUNT          334 a          420 c          428 g          328 t
ORIGIN      
        1 aagcaaggct tcgataccat gtaccgggac ggctctagca gtggccggct tatggtactg
       61 aacctgcacc cctggcttat cgggcagccc ttccggatag gtgttctgga cgatgcgttg
      121 ggacatatta tgcgacgcca gggggtgtgg gcggctaccg ggtcggagat tatcgattgg
      181 tatcaagcac attctcctgg tgaaccagca gtctgaccaa tggaaacggt aatcaggaac
      241 gctacagttg ttaccggaga tgtcggtcgt accgtcctct acgaccatgc cctggccgtc
      301 agagacgaca ggattgatgc tgtaggcccc agcgaagaga ttattgctgc ttatccggaa
      361 gccgacatta ttaacggtcg gggcaaggca attttcccgg gcctgatcaa ctgccacaca
      421 cacctcctgg ccacgctaga cagggggctc ctggaggatt ttgggttccc cacgcggttg
      481 aggttcccag taaccgccca ttcccttctg actaaagagg aacatcaggt catggcggtg
      541 ctaggcgcat tggaagccct tcgcagcggt acgaccagct tactggaaat ctccggaaac
      601 gtggcaatgt acgcttcacc cctggagcgg acgggcttgc ggctggtgct ggcggaaaac
      661 atcaatgatg tagatgaatc cggggtgcgt gagggcgtgt gcaaattctc caacaagaaa
      721 ctggattcgg ggctgcaaag aagcgctgac ttgatagaaa agtggcacag caccagtgag
      781 ggtcgagtaa cctgttttgt agcgccccat gcgccggaga cctgctcacc ccaattgcta
      841 aaaaagagcc gggatctggc cgaaaaatac gggaccgggt ataccatcca cctgtcgcaa
      901 agccgcattg aactggaagt ggtaaagcgc acccggagtg taagcccaac ccattatttg
      961 ttcgccaatg actttctggg gccccgactg gtggcggccc actgccggta tgtggacgcc
     1021 tcggaaattg cactactggg gcagatggcg gtgggcatct ccaacaacgc cgccatagcg
     1081 gcccgactcg ggccatttgg gccccggtgc ttttcttcca gcccgaagac tctcttgtaa
     1141 tactctgctt ccttgtcccg gtcctgcaca ttcagggcta tgcggcggat tcttggacgt
     1201 tccatgctga tctcctccag gcgtttctga ttttgaatga atcattagcc aagccggcaa
     1261 tcttgacaga taggggtaca actggacacc agcgtttgct gtcaccgaac ataccgaccc
     1321 atcttgaagg ccagtttctc tagtccggca gcacggcaat ggcctcaatc tcgatcttca
     1381 aatcgggagt acccagggcc gccacctgta cttgtgtgct ggcgggaaac gcccctgcaa
     1441 aatacttgcg ccgcacttca gcgctggctg gggcctccct cagatcagta acaaagctgg
     1501 tgactttaac
//
LOCUS       DASQSL010000423         1295 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_166470, whole genome shotgun sequence.
ACCESSION   DASQSL010000423 DASQSL010000000
VERSION     DASQSL010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1295
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166470"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(147..>1295)
                     /locus_tag="VE844_04280"
     CDS             complement(147..>1295)
                     /locus_tag="VE844_04280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00592.1"
                     /translation="KKNKWEQEIGPIKAFAWPWLLQGARLAELHGKKLALTRAGRDAL
                     GKPPAETLRAIWQRWLKAKLLDEFNRIDVIKGQHGKGKHALTATEGRRALIAEALKQC
                     PVGRWVEFDEFSRFTQAAGFEFEVTRDPWSLYISDPHYGSLGYTGFHDWHIVQGRYLL
                     CLLFEYAATLGMIDVAYIEPKSARRDYREIWGTDDLNFLSRYDGLIYFRLNPLGVYCL
                     GLTDNYQPSRREVRTVLTVLPGLQINVARGVLSTEEVLLLETWAEKESETLWRLDRDK
                     ALCAMEGGHSITELHEFLQVRDEQSLPETVEGFIATTERQARALKNTGTALLIECADA
                     EIADRIATHEGTKRLCLRAGERHLAVKVEAEEQFRKALHVLGYGMPRV"
BASE COUNT          257 a          390 c          364 g          284 t
ORIGIN      
        1 gtgggcataa tcaccagcgt gtcgcgcctc ttcagaacat tctcgatgac ctcgcgttgg
       61 aggggcttga actggtcgta gccaaagaca tttttgagaa gctcatccgg atcaggaacc
      121 gccatcatgc cgaaaggcct ctcctcttaa acgcgcggca tcccgtatcc caacacatgc
      181 agcgccttgc ggaactgctc ttcggcttcg accttgacgg cgaggtgacg ttcgccggca
      241 cgcaaacaca gtctcttcgt gccttcgtga gtggcgattc tatcagcgat ctcggcatct
      301 gcacactcga tgagcaaggc tgtgccggtg ttcttgaggg cgcgcgcttg ccgttcggta
      361 gtggcgatga agccttcgac ggtttcaggc agcgattgtt catcgcgcac ttgtaagaac
      421 tcgtgcagct cggtgatcga atggccgccc tccatcgcgc agagggcctt gtcgcggtct
      481 agccgccaga gcgtttccga ttctttttct gcccaggtct ccaacaacaa gacctcctca
      541 gtcgaaagca cccctctagc gacgttgatc tgtaagccgg gcagcacggt gagcacggtg
      601 cgcacctccc tccggctcgg ctggtaattg tctgtgagac ccaggcagta cacgcccagt
      661 ggattgagac ggaagtagat caacccgtcg tagcggctca aaaaattcag atcgtccgtg
      721 ccccatatct cgcgataatc acggcgcgca ctcttgggct caatgtaggc cacatcaatc
      781 attcccagcg tcgcagcata ctcgaagagc agacacagaa ggtagcggcc ttgcacgatg
      841 tgccaatcgt gaaagcctgt gtaaccgagg ctgccgtaat gcgggtctga gatgtacagg
      901 ctccacggat cgcgcgtgac ttcaaactcg aaacccgcgg cttgcgtaaa gcgagagaat
      961 tcatcgaact ccacccacct gccgaccggg cactgcttta gtgcttcggc aatcagggcg
     1021 cggcggcctt cggtggcggt cagcgcatgt ttgcctttac cgtgctggcc tttgatgaca
     1081 tcgatacggt tgaattcatc gagcagcttc gccttcaacc agcgctgcca gatcgcgcgc
     1141 aaggtctcgg cgggaggttt gccgagcgca tcgcgcccag ctcgggtcaa ggcgagtttt
     1201 ttgccgtgca gttcagcgag cctggccccc tgcaagagcc aaggccaggc gaaggccttg
     1261 atcggaccga tctcctgttc ccatttgttt ttctt
//
LOCUS       DASQSL010000424         2424 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_98585, whole genome shotgun sequence.
ACCESSION   DASQSL010000424 DASQSL010000000
VERSION     DASQSL010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2424)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2424)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2424
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98585"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            328..777
                     /locus_tag="VE844_04285"
     CDS             328..777
                     /locus_tag="VE844_04285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC00593.1"
                     /translation="MATQDDFARIRTEFIDPFQHDYEAIRPVVLFGATAAERSRQTGI
                     DRTTIADKAKRFVTGGMLGLADGRTQPTPSVGAIYPDGIAAYIIYLKQRYPPIHLREI
                     ERILWRKFAYKTNHHTLKRFLEPYETPLQLELDLTTFSSFDNAYEAR"
     gene            790..2112
                     /locus_tag="VE844_04290"
     CDS             790..2112
                     /locus_tag="VE844_04290"
                     /inference="COORDINATES: protein motif:HMM:NF012870.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HZC00594.1"
                     /translation="MAQEGWNKASIADCLKLSRTHVYTILRAFEQDGFAALEDHRTRP
                     PQHPGNQLNLPFFKEVLDLQHEYPRAGRFRIHGLLSAQRDEPPPSERTVGRAMAINRQ
                     LHGAPGPWQSARDDQKDEISLGPLPYRPEYPHHMWFTDIRYLVQLGGSWVYSICVLEG
                     YSRNILAGMVSPHQDLTAVLQILFAALSTYGRPQIIVSDNGSVFAAGDYLSILKALEI
                     EPRHIEKGKPWQNLIEAQFKVQLRLADFKFEQAQTLDEVQAAHADFIELFNTTPHWAH
                     RQRVDGRHTPVDVLGWRRGRLVEPKRLRQLFGRAAFLRTVNRYGFISVQRFYVYAESG
                     LSRKRVSIWIYEGELGIEYQQPIVARYRCDYDGRRGELQGVSEPRIYTTAFPSPQLEL
                     IELDDEQWVKFQRPPPKTYPKRTAMIGQQLSLLDLGTSALFLLALKAI"
BASE COUNT          560 a          682 c          667 g          515 t
ORIGIN      
        1 aggtgagggg tgccgatgaa gccgagaatg acgacccaga acaagaccta gggcgtgtgt
       61 cgcgaaaaaa gagggcgaac gggagcgagc ctgtggtaaa gatagctcag agcaagcatg
      121 cgattcccct tattggatca agtgctaagg gaaactttat cgcatgcttg ctcgacttta
      181 ctcgtcacgg ccatacgctc agattatgcc tcaacgttcc ctgagagatg ggagaactta
      241 tgactcatga gttaaggggt aattatagaa taaacagtca tttgggatgc caagtggagc
      301 tctcagaagc cgaaaggaaa cgctggcgtg gccactcagg acgattttgc ccgcattcgc
      361 accgaattca ttgacccctt ccaacacgat tacgaagcca ttcggcccgt ggtgctcttt
      421 ggcgccaccg ccgctgaacg tagtcgtcaa accggcatcg atcgcaccac cattgccgac
      481 aaagccaaac gctttgtcac gggcggtatg cttggccttg ccgatgggcg tacgcagcct
      541 acgccgagcg tgggggcgat ctatcccgat ggcatcgcgg cctatatcat ttatttgaaa
      601 cagcgctatc cccccattca cttgcgtgag atcgagcgga ttttatggcg taagtttgcc
      661 tataagacca accatcacac cctcaaacgg ttcttagagc cctatgagac gcctctgcaa
      721 ctcgagctgg acctgaccac gttttcctcc tttgacaatg cctatgaagc gcgctgaacg
      781 gtggtgcgca tggcccagga aggctggaat aaagcgagta ttgccgattg cctgaagctg
      841 tcgcgcacac atgtctacac gattcttcga gccttcgaac aagacggctt cgctgccctc
      901 gaagaccacc gcacaagacc gcctcagcac ccgggcaatc agctgaatct gccctttttc
      961 aaagaggtct tagacctgca acatgagtac ccgcgagccg ggcgctttcg catccatggt
     1021 ctgctgagcg cgcagcgcga cgagccgcca ccgagcgagc ggaccgtggg acgagccatg
     1081 gcgatcaatc gccaattgca tggggcaccc ggtccgtggc aaagtgcccg cgatgaccaa
     1141 aaggacgaga tcagcctcgg cccgctgcct tatcgccccg agtatcctca ccatatgtgg
     1201 ttcacggaca ttcgctacct cgtccaattg ggcggcagtt gggtctacag catctgtgtg
     1261 ctggaagggt attctcgcaa catactggcc ggcatggtct ctccgcatca agacctcacc
     1321 gccgtgcttc agattctctt tgccgccctg tcaacctacg gccggccaca gatcatcgtt
     1381 tcggacaatg gcagcgtgtt tgcggccggc gattacctgt cgattttgaa agccctggag
     1441 atcgagccac gccatattga aaagggtaag ccctggcaaa acctgattga agcacagttc
     1501 aaagtgcaac tacgcctggc tgatttcaag tttgagcagg cccaaacgct agacgaggtg
     1561 caagccgcgc atgccgattt catcgaactc tttaatacga caccgcactg ggcccaccgc
     1621 cagcgtgtcg atggccgcca cacaccggtg gacgtgctgg gttggcgccg gggacggctc
     1681 gttgagccca aacgcctgcg tcagctcttt ggccgggcgg cctttctgcg taccgtgaat
     1741 cgctatggct ttatcagtgt gcaacgcttc tatgtctatg ccgaaagtgg gctgtcgaga
     1801 aaacgcgtgt cgatctggat ttacgaaggc gaactgggca ttgagtacca acagccgatc
     1861 gtggcacgct atcgctgcga ctatgatggc aggcgcggcg agctgcaagg ggtaagcgag
     1921 ccgaggatct acacaacggc gtttccctcg ccccagctcg agttgatcga actcgacgat
     1981 gagcagtggg tgaaatttca gcggccgccg ccgaaaacct acccgaaacg gacagccatg
     2041 atcggacagc agctttcctt gctcgatctt ggcacctctg cgctgtttct actggcttta
     2101 aaagcgatat gaaaggtggg gaggtagggc ttcccaaata tgtacacagt gatgtggcca
     2161 agtccacgct caccctcatc aacaacagct tcacgatggg catacaagcg gcgcgcacgc
     2221 cgggcaaatt ccatcggggt caacggcatt tccatacctg tatctcctta gggtgagggc
     2281 gtttggtcgg taacgtggct gcaagtatag aagggtactc atcggggagc aaatcaagag
     2341 gtcgcgagtt ttatcaattg gtctaagcct ttatcacatc caaagataac ggttcctgga
     2401 agcgatctca gatatcttca aggc
//
LOCUS       DASQSL010000425         1031 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_181016, whole genome shotgun sequence.
ACCESSION   DASQSL010000425 DASQSL010000000
VERSION     DASQSL010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1031
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181016"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..664)
                     /locus_tag="VE844_04295"
     CDS             complement(<1..664)
                     /locus_tag="VE844_04295"
                     /inference="COORDINATES: protein motif:HMM:NF016257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA C-terminal
                     FtsZ-binding domain-containing protein"
                     /protein_id="HZC00595.1"
                     /translation="MNELRWILLLLGLAIIAGIYFWGTRACARRLSRKHRYSDDESLE
                     LSSMPREADNGLLDYTETLSDQPWLKEDEDQAADVGGAQAGRERAPYTYSSDGRIIVL
                     YLIAPSDQPYSGNAIHSAAGSVGMRFGDMGVYHYFGVGAMRSPRSLFCLADMLEPGSF
                     DLKQMENFETSGVVLFMQLPPPSFKRVAFDLMLNTAQRLLKRLHGELLDDYRKPLTAE
                     GIE"
     gene            complement(667..>1031)
                     /locus_tag="VE844_04300"
     CDS             complement(667..>1031)
                     /locus_tag="VE844_04300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012587383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZC00596.1"
                     /translation="TGVTLLARPPGKRNSTIHLLSGGEKALTALALIFAIFELNRAPF
                     CLLDEVDAPLDDANVVRLCRMLKSMASRVQFLFVTHNKITMEIAERLIGVTMQEPGVS
                     RLVAVDIEEAVAMAATGG"
BASE COUNT          231 a          309 c          285 g          206 t
ORIGIN      
        1 gttcaatccc ctcggcagtc aggggtttac ggtagtcgtc caggagttcg ccgtgcaggc
       61 gtttcagcaa ccgctgcgcc gtattcagca taagatcaaa cgccacccgc ttgaaactgg
      121 gcggcggtag ctgcataaac aacaccacgc ctgaggtctc aaagttctcc atctgtttga
      181 gatcaaagct ccccggctct aacatgtcgg caagacaaaa caggcttctg ggcgaacgca
      241 tcgccccgac cccgaaataa tgatacacac ccatgtcgcc aaagcgcatc cccacggacc
      301 cggcggcact gtgaatggcg tttcccgaat agggttgatc cgagggagcg ataagataga
      361 ggacaatgat acgcccgtcg ctggaatagg tatagggcgc ccgctcccgc cctgcttgag
      421 cgccccctac gtcagccgcc tggtcttcgt cctccttaag ccaaggctga tcgctcagag
      481 tctcggtata atcgaggaga ccgttgtcgg cctcgcgggg catggagctt agctccaagg
      541 attcatcgtc gctatagcgg tgcttccgac tcaagcgtct tgcgcatgca cgggtgcccc
      601 agaagtagat ccctgcaata attgccagcc cgagtaacag taggatccaa cgcagttcat
      661 tcatagtcaa ccccccgtag cagccattgc cacggcctcc tctatatcga cagccacgag
      721 ccttgacact ccaggctctt gcatagtcac accgatcagg cgttcggcga tctccatggt
      781 gatcttatta tgggtcacaa acaggaattg tacccggctt gccatcgatt tgagcatcct
      841 gcaaagacgc accacattgg catcatcgag cggcgcatcg acttcgtcga gcaggcagaa
      901 gggcgcccgg ttgagctcaa agatggcaaa gatcaaggcc agggcggtga gcgccttctc
      961 gccgcccgag agcagatgga tggtgctgtt gcgcttgcct ggaggacggg cgaggagggt
     1021 gacaccggtt t
//
LOCUS       DASQSL010000426         1300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_126974, whole genome shotgun sequence.
ACCESSION   DASQSL010000426 DASQSL010000000
VERSION     DASQSL010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126974"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..230
                     /locus_tag="VE844_04305"
     CDS             <1..230
                     /locus_tag="VE844_04305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007918112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00597.1"
                     /translation="YAPELNPAEGIWNYLKRVELKNLCCQSISHLNYELRKATNRLRH
                     KTKIILGCIRQPGFYYRFLHKSLKAPIYQIW"
     gene            241..723
                     /locus_tag="VE844_04310"
     CDS             241..723
                     /locus_tag="VE844_04310"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HZC00598.1"
                     /translation="MEKTLSSQATNWKEGRRLRAWELYQEGWKQSDIANALGVTQGAV
                     SQWLKRGREGGVESLRHQPPPGATPRLSPAQRDQLLKLLSQGAEFFGFQGDVWTQPRV
                     AILIRDRFGVSYDPSHVGRILKAGGWSSQKPVHRATQRNEEAIRLWKEERWPQVKKRR
                     "
     gene            738..1163
                     /locus_tag="VE844_04315"
     CDS             738..1163
                     /locus_tag="VE844_04315"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00599.1"
                     /translation="MVFADQSGFYLLPSKVRTYAPAGQTPIIRAPLSRDHLSAMGGIT
                     PEGKLYLMVQERAYRGVDVVGFLKHLARHITGKLLVLWDGAPIHRSRVVKEYLSNGAA
                     HRIHLEQLPGYAPELNPAEGIWNYLKRVELKKTGQLAIF"
     gene            1169..1273
                     /locus_tag="VE844_04320"
                     /pseudo
     CDS             1169..1273
                     /locus_tag="VE844_04320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004450378.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
BASE COUNT          306 a          375 c          391 g          228 t
ORIGIN      
        1 gctacgcgcc ggaactgaac cctgctgagg ggatctggaa ctacctgaaa cgggtggagc
       61 tgaagaacct ttgttgccaa agcatctccc atctcaacta tgagctgcgt aaggccacca
      121 accgcctccg gcacaagacc aagatcattc tgggctgcat caggcaacct gggttctatt
      181 accgattcct gcacaaaagt ctaaaggcac cgatttacca gatttggtag tctcagctcc
      241 atggaaaaga ccttgtccag ccaggctacc aattggaagg aaggccgccg tttgcgggcc
      301 tgggagctgt accaggaagg ctggaagcaa agtgatatcg ccaacgccct gggggtaacc
      361 caaggggccg ttagccagtg gctgaagcgt ggccgagagg gaggggtaga aagtttgcgc
      421 caccagccac ccccaggagc aacgccccgg ctgtccccag cacagcggga ccaacttctg
      481 aagctactgt cccagggggc ggaattcttc ggcttccagg gcgacgtctg gacccagccc
      541 agagtggcca tcctgattcg agaccggttt ggggtgtcat acgatccttc ccacgtaggc
      601 cgtattctga aggccggtgg ctggagtagc cagaagccgg tacaccgagc gacccagcgg
      661 aacgaggagg ccatccgact ctggaaggaa gaacgctggc cccaggtcaa aaaaaggcga
      721 tagaggaggg acggacggtg gtctttgcag accagtctgg gttctacctg ctgcccagca
      781 aggtgcggac ttacgctccc gcgggccaga cccccattat ccgggctccc ctgagccgag
      841 accacctgtc ggccatgggc ggcatcaccc cagaaggcaa actctacctg atggtccagg
      901 agagagctta ccgaggagta gatgtggtgg ggttcctgaa gcacctggcc cggcatatta
      961 ctggtaagct gctggtgctg tgggatgggg cgcccatcca ccggagccgg gtggtgaagg
     1021 agtacctgag caatggcgcc gctcaccgga ttcacctgga gcagttgccg ggctacgcgc
     1081 cggaactgaa ccccgctgag gggatctgga actacctgaa acgggtggag ctgaagaaga
     1141 ctggccagct ggcgatcttc taaacactat gctcattggt tacgcccggg tctcaaccca
     1201 tgaccaaacc ctcaatctcc aacaagacgc cctccaaaag gcgggttgca ccaaaatctt
     1261 cactacccga atgatgtaat tgccgaataa aaaggcaggg
//
LOCUS       DASQSL010000427         1067 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_111735, whole genome shotgun sequence.
ACCESSION   DASQSL010000427 DASQSL010000000
VERSION     DASQSL010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111735"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            360..911
                     /locus_tag="VE844_04325"
     CDS             360..911
                     /locus_tag="VE844_04325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00600.1"
                     /translation="MKSTGELAGKVRPRRSMCLPSLIWLVAAFLSVSSVTYPETVAGT
                     SGLQPGFILAVQDELISLRAEDASLKAIFEEIGHRMNIQVKAEIPETATANFACEQLP
                     LQEVLKRLGRYVNYGYVGRWEQGKWRISTITVHSLKVANRHGGPSVDGSQDLQDKRPR
                     PRLEMNIDPSKYLREKRQPPEAD"
BASE COUNT          249 a          295 c          299 g          224 t
ORIGIN      
        1 atcgcctgtg tttgaaaggg tttgcgctga ggatgtttgc catgtcattc cctcctctat
       61 atgccttcag ggggactcgg acgcgttgtc caccggtttc tacctgaacg cgagctaact
      121 tccgtagcgc ttcgtttcgc atggtcatcg gctagtaccc cctaacagat cagatggcag
      181 caaggccctc tggcgtatca ctggcattga aacacaaaaa cctcacaatc gtatgactca
      241 gggcacagcc tctcggatgc tgcgaactct cgtggctgtt atctgttcaa gcgtagccag
      301 catatgactt tgcccgcatg cacgagtggg tggacatagt gcggaaacag gaggccgctt
      361 tgaaatctac aggagagctc gctggtaaag tgcggcctcg gcgctccatg tgcctcccct
      421 ccctcatatg gcttgtcgcc gccttcctga gcgtgtcgag tgtgacctac cctgaaacgg
      481 ttgcaggcac ttcagggctc caacccgggt tcatcctggc ggttcaggac gagcttattt
      541 cactcagggc tgaagacgct tccttaaaag ccattttcga ggagatcggc catcggatga
      601 acatccaggt aaaagcggag atcccggaga ccgccactgc gaatttcgca tgtgagcagc
      661 tgccgctgca agaggtgtta aagcgccttg ggaggtacgt gaattatggc tatgtggggc
      721 gttgggagca agggaaatgg aggatcagca ccatcacggt ccattccttg aaagtcgcga
      781 accgccatgg aggacctagt gtagatggct cccaggatct gcaggacaaa cgcccaagac
      841 ctcgattgga aatgaacatt gacccgtcga agtatctgcg ggagaaacgg caaccacctg
      901 aggcagactg agcataccgc tctgcacgat tcaggtgcca ccacagcggc atcatacgct
      961 cacataaggg ggctgatgga agagcaatcg gttcagcaca cagcacactt ctccgagggg
     1021 ccggacgcgg cggctacctc gcccgaaaaa aaacatccct ggcaaga
//
LOCUS       DASQSL010000428         1154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_29304, whole genome shotgun sequence.
ACCESSION   DASQSL010000428 DASQSL010000000
VERSION     DASQSL010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29304"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..225
                     /locus_tag="VE844_04330"
     CDS             <1..225
                     /locus_tag="VE844_04330"
                     /inference="COORDINATES: protein motif:HMM:NF024980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HZC00601.1"
                     /translation="EAYGFRGEVWTCARIARVIEWEFGVSYHQDHVSRLLKAIEWTPQ
                     KPISHATQRNEREITHWRTKLWPELKKSAA"
     gene            245..754
                     /locus_tag="VE844_04335"
     CDS             245..754
                     /locus_tag="VE844_04335"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00602.1"
                     /translation="MDEAAFYLLAGVVRTYAPCGETPILKVFQTRDHLSVMSGITPAG
                     QLATRTRARALTGLDSVAFLRHLYWYFDSKLLVIWDGASIHRATEVKDFLADGWTKVI
                     HLECFPVYAPELNPDEGVWQHLKHVELRNVCCINFAHLSIELNLAIRRLRRRSDLIRS
                     FFAGAELDL"
     gene            complement(768..>1154)
                     /locus_tag="VE844_04340"
     CDS             complement(768..>1154)
                     /locus_tag="VE844_04340"
                     /inference="COORDINATES: protein motif:HMM:NF013753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00603.1"
                     /translation="SLKGRRALKTLLAANKRLNTAYMLKESFGQLWSYEREGWARRFF
                     ENWRASLKWQRLKPYEEFAEMIDRHWDGIAAYCKPENKVPLGFVEGLNNKIRVIQRRA
                     YGLRDEEYLRLKVLTCMLPALYRSLH"
BASE COUNT          242 a          315 c          326 g          271 t
ORIGIN      
        1 gaggcgtatg gatttcgtgg cgaggtctgg acctgtgcgc gtatagcgcg ggtcattgaa
       61 tgggagtttg gtgtgtcgta ccaccaagac catgtctcac gtttgctcaa agccattgaa
      121 tggacgcccc agaaaccgat cagccacgcg acccagcgca atgagcggga gattacccat
      181 tggcgtacca agctctggcc ggaattgaaa aaaagcgcgg cgtgagcggc ggctgatcgt
      241 ctgcgtggac gaagccgctt tctacctgtt ggccggagtg gtcagaacgt atgcgccgtg
      301 tggcgagacg ccgatcctca aggtcttcca gacgcgcgac catttgtcag tgatgagcgg
      361 cattacgccg gctggacagt tggccacacg gacgcgcgca cgtgccttga caggcttgga
      421 tagcgtagcc ttcttgcggc atctgtattg gtatttcgac agcaagctgc tggtgatttg
      481 ggacggcgcc agtatccatc gtgcaacgga ggtcaaagac ttcctggccg atggctggac
      541 aaaagtaatc catttggagt gcttcccagt ctacgcgccg gaactgaatc cggatgaggg
      601 ggtctggcaa catctcaaac acgtcgagct acgtaatgtt tgctgcatta atttcgctca
      661 ccttagcatt gaacttaatc tagcgatccg gcgattacgc cgacgatcgg atcttattcg
      721 atcatttttt gccggtgcag agttagattt gtgattaggg gaagctatca atgcagcgat
      781 ctatagagcg ccggcaacat gcaggttagg actttcaggc gcaggtattc ctcgtctcgc
      841 agtccgtatg cacgtcgctg gatgacgcgg atcttgttgt tcaacccttc aacgaaacca
      901 agcggaactt tgttctcggg tttgcagtag gcggcgatcc catcccaatg tcgatcgatc
      961 atctcagcga attcctcgta gggtttcagg cgctgccact tcaggctcgc tcgccagttc
     1021 tcgaagaacc gccgtgccca gccctcccgc tcatagctcc acaactgccc gaaggactcc
     1081 ttcagcatat acgccgtgtt cagtcgcttg ttcgctgcga gcagcgtctt caacgcccgg
     1141 cgacctttca acga
//
LOCUS       DASQSL010000429         2831 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_127022, whole genome shotgun sequence.
ACCESSION   DASQSL010000429 DASQSL010000000
VERSION     DASQSL010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2831
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127022"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..441
                     /locus_tag="VE844_04345"
     CDS             <1..441
                     /locus_tag="VE844_04345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016877257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5996 family protein"
                     /protein_id="HZC00604.1"
                     /translation="KEFRSRFIGKCSPVHFFWGSFDLAVTRFNGERAPERKDADSITR
                     EAYSHKCISHGFWCGGGAVKEPAFYTYAAPEPEGFSEAKIQPATAYYHQELKEFILPY
                     EVVRQSDAPEKTLLNFMQSTYEAGANLDNWNRVELERKVKATVG"
     gene            560..865
                     /locus_tag="VE844_04350"
                     /pseudo
     CDS             560..865
                     /locus_tag="VE844_04350"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
     gene            complement(937..2160)
                     /locus_tag="VE844_04355"
     CDS             complement(937..2160)
                     /locus_tag="VE844_04355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012606582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZC00605.1"
                     /translation="MEPMHKRVAGLDVHRMKHVVTVLIEEKDGTLTKVTRQFGGFKRD
                     LRELIGWLGEHRVELVVMESTAIYWKSVYASLSAAGIPALVVNARHVKNVPGRKTDVA
                     DSEWLAQLARFGLMRGSFIPPKDLRELRLVSRYRRKLSGMLAGEKNRLHKLLDDAGIK
                     LGGVVADIDGVSARRMVEGLIAGKSPGELATLGLGPLKDKREALEASMEGELSPRHRL
                     ILEAAYRHIRYLEDELAALDRYLIEAMQPYAWAGQLLQTLPGIDKISAAMILIEISDD
                     LTRFGTADRLASWAGLCPGNHESAGKRKSGKTRHGNPIVRYLLCEVANAARRTKSVFR
                     AKYDSLVLRRGHKKAIIALAHKLLRTIFFVLTPRQPYRDSGFDYEAASVAKNAPRWIR
                     ALKKFGYWPTVQPAA"
     gene            2468..2731
                     /locus_tag="VE844_04360"
     CDS             2468..2731
                     /locus_tag="VE844_04360"
                     /inference="COORDINATES: protein motif:HMM:TIGR01439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HZC00606.1"
                     /translation="MATIATTKMSSKGQVVIPEDIRKRLGLKAGSQFVVMAGKDAVIL
                     KASAAPSLDKFDELMVEARRQARRAGLKQANIRRVIAQARGHG"
BASE COUNT          621 a          788 c          820 g          602 t
ORIGIN      
        1 aaagagtttc gctcgcgctt catcggcaaa tgcagtccag tgcatttctt ttggggaagt
       61 ttcgatttgg ctgtcacgcg cttcaacggc gaacgagcac cggagcgcaa ggatgcagat
      121 tcgattaccc gcgaagccta ctcgcacaaa tgtatcagtc acggtttctg gtgcggcggc
      181 ggcgcggtca aagagcctgc gttttacact tacgccgcgc ctgaacccga aggattcagc
      241 gaagctaaaa ttcaacccgc gacagcttac tatcatcaag aattgaaaga attcatcttg
      301 ccttacgaag tggtgcggca gtcggatgcg ccggaaaaga ctttacttaa ttttatgcaa
      361 agcacctacg aagcgggcgc aaacctagac aattggaatc gcgttgagct agagcgcaaa
      421 gtaaaagcga cagttggcta aatcacaaag cgaaaaaggc aaatccccat gttctatatt
      481 ccgataatct tgggtagcac ccgcagagac aggcagagtc ccaaagtggc tcgcttcata
      541 cacgagcgga tgcgccgtta aacagataga gactgaaacg ctcgaccttc tcgcatacga
      601 ttttccaatc atggaggagc gtttgcggtt tcgtgatgat ccgccgcccg gcttgcgcga
      661 attcagcgag aagatcgctc gcgccgattc gcttgtcatc gtgacgccag aatacaataa
      721 cggctatccg ggcgtgttga aaaacgcttt ggattatctt ttgccggaat atcatcgcaa
      781 gccaatcgcc atcatcacgg tctcggcagg cgggttcggc gggttaaatt gtttggctca
      841 gttgcggctg gtcacgttac cgtgaaagcg tcccgtaatt tggacgagcg aaggcctcct
      901 gtggacagga tcaagaaaga agctttgcga tctggctcag gccgccggct ggacggtagg
      961 ccagtagccg aacttcttca gtgctcggat ccagcgggga gcgtttttcg ccacgctggc
     1021 cgcctcgtaa tcaaacccag aatcccgata cggttggcgg ggggtgagca cgaagaagat
     1081 ggttcgcaac agcttatgcg caagagcgat gatggctttt ttatgcccgc gacggaggac
     1141 aaggctgtcg tatttggcgc gaaagacgct tttcgttcgt cgggcggcgt tagccacttc
     1201 gcacaacagg tagcgcacga tggggttgcc atgacgcgtt ttaccgctct tgcgcttacc
     1261 cgcgctctcg tggttgccag ggcagagtcc tgcccacgag gccagccggt cggccgtgcc
     1321 gaaacgggtg aggtcatcgc tgatttcaat gaggatcatc gcggcgctga ttttgtcgat
     1381 gccgggaagg gtctgcagga gctgccccgc ccaggcgtag ggttgcatgg cctcaatgag
     1441 gtagcgatcc agggccgcca gttcgtcttc gaggtagcgg atgtgacggt aagcggcttc
     1501 gagaatcagg cggtgcctgg gggaaagctc gccctccatc gacgcctcca gcgcctcgcg
     1561 cttgtccttg agtgggccca gcccgagcgt ggccagttca ccgggcgatt tccccgcgat
     1621 gagcccctca accatccttc tggccgagac gccgtcgatg tcggccacta ccccgcccag
     1681 cttgataccc gcgtcgtcca gaagtttgtg caggcggttc ttctcgccgg cgagcatgcc
     1741 cgagagtttc ctccggtagc gggaaaccag acgcaactcg cgcaggtctt tgggcggaat
     1801 aaagctgccc cgcatcagcc caaagcgggc cagttgtgcc aaccactcgg aatcggccac
     1861 atcggtcttg cggccgggca cgttcttgac atgccgggca ttgaccacca gtgcgggaat
     1921 gccagccgcc gagaggctcg catacacact cttccaatag atggctgtgc tctccatcac
     1981 caccagttca acgcggtgtt cgcccaacca cccaattaac tcccgcagat cacgcttgaa
     2041 gccgccaaac tgtcttgtga ccttggtcag cgttccatcc ttctcttcaa tcaggacggt
     2101 gaccacgtgc ttcatgcggt ggacatcaag cccggccacc cgtttatgca tcggttccat
     2161 agtttctctc ctagggttag actcagaggt ggaagacggc gggcgtgccg gccggaaatg
     2221 cctggtgcca attctcgaca caggccactt taccgtgcgt cctgcaagcg aggctggcga
     2281 aacaatctgg ggtgcgagcc ggccaggcgg ggtccagtta ggcaacgggg taaaaccgcc
     2341 aaacgtacag cgacctctcg cccgctgtct cccattcctt atcatggcat aaattcgcaa
     2401 cggctttcat gctccggggc gagcagagaa ccgatcatga ctggttaggt aatttacgag
     2461 aatacccatg gcgactatcg caaccactaa gatgtcctct aaaggtcagg tagtgatccc
     2521 agaagatatc cgcaaacggt tgggcttgaa agcaggttca cagtttgttg ttatggctgg
     2581 caaggacgct gtcatcctga aggcaagtgc ggctccatcc ttagataaat tcgatgaatt
     2641 gatggtcgag gcacggcggc aagcacgccg ggcaggactc aagcaggcca atatccggcg
     2701 agtgatcgcg caggcacgag gtcatgggtg aaggtcgttc tggacacgaa cgtcctcatg
     2761 ttggcgatct tcttcggtgg cgcacctggg caaatcatca aagcttggcg tgatgggaag
     2821 atccagttgg t
//
LOCUS       DASQSL010000430         1163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_181052, whole genome shotgun sequence.
ACCESSION   DASQSL010000430 DASQSL010000000
VERSION     DASQSL010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181052"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            405..773
                     /locus_tag="VE844_04365"
     CDS             405..773
                     /locus_tag="VE844_04365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012385187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase family
                     protein"
                     /protein_id="HZC00607.1"
                     /translation="MPQLVEMDRHVSFFEQMEEQAGAVILINTFTVEPEEADQLLEAW
                     ATDAAYMKQQPGFISTQLHRGIGGSSVFFNYAVWESVEHFKRAFSNPEFQSKMADYPP
                     SAAASPHLVKKVAVPGICVD"
BASE COUNT          251 a          319 c          359 g          234 t
ORIGIN      
        1 tcggtacccc aacctatgta cgccctggcg ggtgagggcg tatagcctaa gagccagcga
       61 gtaactgtaa gcatgtacag ggaggccctg atcagggtct cccttttgcg tccggaggat
      121 gtcctgccga cggtacgatc caagtatgtt gccgcaccgt cgggtgtgat ggctgagcag
      181 ggcaagaaac gccttgggcg gccattcacc cgtaaagtca gaaagggcac cagggagttt
      241 ttcagcagac actctccccc tctcggcagt tcgatgaata gcttcaagaa cgctcggctg
      301 aggcatgcgt tcggtgttgt ctcgatgtag gctgtgcgta ttgtgggaaa gcagcttttc
      361 ggagggcaat agcgttccga acaaccgcga gggagtggag ttaaatgcca cagctggtcg
      421 agatggatag gcacgtgtcg ttcttcgagc aaatggagga gcaggccggc gcggtgatcc
      481 tgatcaacac gttcacggtc gaacccgagg aggccgacca actgctcgaa gcctgggcga
      541 cggatgcggc gtacatgaag cagcagccgg gcttcatctc cacgcagctt caccggggca
      601 tcggcggaag ttcggtgttc tttaactacg ccgtgtggga atcggtcgag cacttcaagc
      661 gagccttcag caaccccgag ttccagtcga agatggcgga ctacccgcca agcgccgcgg
      721 cgtcgcccca cctcgtcaag aaggtcgccg tgcccggcat ttgcgtagac tgagtttacg
      781 tagctagacc aagagggccg ggccttctaa ggggccccgg ccctctttag tgcccgaact
      841 tccgagaaga agcgagcctg ttgaaaaact ccttcgtgcg ccttttctga cgaccctcgt
      901 tcaggcgcca agaccctgaa tggaggccat gagatagcct tccggggcca gatagaggat
      961 gggaccgtta ctgtagaact gatgcgagct taaagaaagg agacgcaggg cggaccgctc
     1021 cgccggaggc tgcaccagag gcaaactttt cctgcgtttt ctggaaaaag acactgaccg
     1081 ttatggggtt cgtttcgccc aattccaaaa tccgcggggt tggacgcctc gctggagact
     1141 cataaggtct ctctgtgtac tac
//
LOCUS       DASQSL010000431         1337 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_181065, whole genome shotgun sequence.
ACCESSION   DASQSL010000431 DASQSL010000000
VERSION     DASQSL010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1337)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1337)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1337
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181065"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..697)
                     /locus_tag="VE844_04370"
     CDS             complement(<1..697)
                     /locus_tag="VE844_04370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00608.1"
                     /translation="MDSEFLDWALADFSGYVAADELYDGPFCILSAVANRRYKRILYE
                     VLDHDPNHDDIRVFLGRLKSALQARDLTLRGITTDGSALYPEPLAEIFSGVAHQVCQF
                     HVIKELTQGVLQAVAKERERLARSKPKLKRGRPSSKDKAARRGARKSKAIQEKISDLF
                     QDRYLFVKHRLKPSERKRLLFITRGLPQLRKLRELMEQVYALFDRRCCTQTALDKLTK
                     RRQRLNRFKHLGET"
     gene            complement(663..1154)
                     /locus_tag="VE844_04375"
     CDS             complement(663..1154)
                     /locus_tag="VE844_04375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00609.1"
                     /translation="MFGPGEYRPDPSEGITTPAELPPPEIVPYSRNDIRQPCPRCGHS
                     AYRDKQSHRTLHDLGNLDLWCPRDLIVTYSQHYCTKCRKYFNADLCDLAPAGSHYTHR
                     VIDLAVRIVVEDGLPYRPASWHLWRDHRVFVPFATIQNWVEAGGKKGVRAHGQRVSRL
                     GPG"
BASE COUNT          282 a          374 c          394 g          287 t
ORIGIN      
        1 gcgtctcgcc cagatgcttg aaccggttga ggcgctgcct ccgcttcgtg agtttgtcga
       61 gcgccgtctg agtgcagcag cggcgatcga acaaggcata gacctgctcc atgagctcac
      121 gcaacttgcg caactgcggt aagcctcggg tgatgaacag gagtcgtttg cgttcgcttg
      181 gcttcaggcg atgcttgaca aacaagtagc gatcttggaa caaatcactg attttctctt
      241 ggatggcttt gctttttcgg gcgccgcggc gtgcggcttt gtctttcgac gacggtcggc
      301 cgcgctttaa cttgggcttc gagcgggcta aacgctcccg ttctttggcc acagcttgca
      361 agaccccttg ggtgagctcc ttgatgacgt gaaactggca gacttggtgc gccaccccac
      421 taaaaatctc ggcgagcggt tcgggataga gagcggagcc atccgtggtg atgccccgca
      481 gcgtcaagtc acgcgcttgc aaggcgcttt tgagccgacc caaaaagacc cggatgtcat
      541 catggttggg atcgtggtct aagacctcat agaggatgcg cttgtaacgg cgattagcca
      601 cggcggacag aatacagaag gggccatcgt agagttcatc ggccgccaca tagcctgaaa
      661 aatcagccag ggcccagtcg agaaactcgc tgtccatgcg ctcgcacgcc tttttttccc
      721 ccagcctcca cccagttttg gatcgtggca aagggcacaa acacccgatg gtctcgccac
      781 aggtgccaac tcgccgggcg gtagggcaag ccgtcttcca cgacgatccg caccgccaga
      841 tcgatgacac ggtgggtata atgactaccc gctggcgcca gatcacagag gtcggcgtta
      901 aagtacttgc gacacttcgt acagtaatgc tgcgagtacg tgacgatcag atcacgcgga
      961 caccacaagt cgagattgcc caagtcgtgc agcgtccgat gagactgctt gtcccggtag
     1021 gccgagtgac cacagcgcgg acacggttgc cggatgtcgt tgcgactgta ggggacgatc
     1081 tcgggcggcg gcagctcggc gggcgttgtg atcccttcgc tcgggtcggg tcggtactca
     1141 cctggaccga acatcgtgtg gcccttctgg ctcaaatggt aagatccgaa ctatacgata
     1201 aacgcctggt gggagcaacc cggtatcctc gctatagtct caacgcttgc atgagaatac
     1261 gatgggcaat caatagagat ttcatgggga cttgatgtag cgatgtcggc tctataccgt
     1321 cagctgattc ataaacc
//
LOCUS       DASQSL010000432         1076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_98641, whole genome shotgun sequence.
ACCESSION   DASQSL010000432 DASQSL010000000
VERSION     DASQSL010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98641"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(286..663)
                     /locus_tag="VE844_04380"
     CDS             complement(286..663)
                     /locus_tag="VE844_04380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00610.1"
                     /translation="MNRLRRAGMWLLCTALSWGFVSLARAGAPSAAPVQPFEGQIRSV
                     KIDKCGLQPGSCEGSVILDRSGGAGDVVLAIKPGTWLKRGDQFVTIDELGVGNYVKVE
                     AIQIPGQELQQITVLGVGREGGD"
BASE COUNT          227 a          368 c          257 g          224 t
ORIGIN      
        1 tcaattcctg catgcggcct tggacccagc cgttgccagc aaagcccgca agggagagtt
       61 tgtcacatgt tttgaccact tcaacctgct acaaaccgcg ataaattgag cgactcgact
      121 ttggccatgt ttctcgacac cagactcagg agcgaaaccc ttcatacctg gcaagcgcca
      181 gacatggagt ctggatatga gtcattcagt caaaacatgg ggttagagta tcgggcgtga
      241 tggcacgagt ggctgcggtg gttcacgcag atcgccccac gccagtcaat cccctccctc
      301 tcgcccaacc cccagcaccg tgatctgctg gagttcctga cccggaattt gtatggcttc
      361 taccttcaca taattgccca cgccgagctc atcgatcgtg acgaattgat cgccgcgctt
      421 cagccaggtc cctggtttaa tggccaagac cacgtcccca gcccctcccg accggtccag
      481 gatgaccgag ccttcacagg accctggttg taagccacac ttatcgatct tgactgaccg
      541 aatctgcccc tcaaacggct gtactggtgc cgctgagggt gcgcctgccc gcgccagcga
      601 cacaaaaccc catgacagcg ccgtacacag cagccacata ccagctcttc gtaaccggtt
      661 catgtgatcc cctcccgcgc ttcacccacc atccacccag tcgtccctcc cgaaacgcga
      721 ccccgatggg gccccaagcc gctaggattg cctctactct ctctcgaacc ctccgggacc
      781 gtataccctc aagcactgtc cctcgacttg ggccatttct ctcagaacgt tcgaccagcg
      841 gaaacgtcct acacacaagg ctgttctgta tacgaacaga aggcgctgga ggaattcgtg
      901 atctcgacgc ttccaccaca cttcgcctcc ttccaagtca gggccggctc gcccttgcct
      961 gatccgcacg gagtttcttc ccaaatggcc aaagtcgagt gagaagcgtc acagcgtttc
     1021 tagactgcgg agtcctccgg ctgccgaccg ctactagcag cagctgtgtg tgcggt
//
LOCUS       DASQSL010000433         1667 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_193867, whole genome shotgun sequence.
ACCESSION   DASQSL010000433 DASQSL010000000
VERSION     DASQSL010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1667
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193867"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(233..1144)
                     /locus_tag="VE844_04385"
     CDS             complement(233..1144)
                     /locus_tag="VE844_04385"
                     /inference="COORDINATES: protein motif:HMM:NF017373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00611.1"
                     /translation="MQELLNGIQASFIGVIGAIIAFLPNLLAAIVLIIVGWLLGKLLG
                     AVVTRVLRVVRFNEVADRAEIDTFLEKAGVRAGPSAVVGGIVRWAVYLVFFLAAFTAL
                     GLPQVSVLINSLIAYLPKVVLAVIVLLVGALAGKVMAGIVRGTLGSMGMGNPDLFANV
                     ARFAIIAFAVIAALDILEIAPTVVGALWIAFLALIVGSVALAFGLGGREAASHLMLGR
                     MLRAEVEPGVEVTAGAYRKIGHHWLPVHDYRDPGGDSKGAQQPVDWPSSTDGSGAIPV
                     AGAEARGAEATGHGWNEAATGQPGTAW"
     gene            complement(1210..>1667)
                     /locus_tag="VE844_04390"
     CDS             complement(1210..>1667)
                     /locus_tag="VE844_04390"
                     /inference="COORDINATES: protein motif:HMM:NF021098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YsnF/AvaK domain-containing protein"
                     /protein_id="HZC00612.1"
                     /translation="VGIGEQHQHPAGEIREEHQHPVTPQGDVTISRHEEELQIGKREV
                     EYGRVRLRKWVETEPVSEEVELRRETAFVEREPVNRPASGAAIGEEEVEMPLHREEPV
                     VSKETVEREQISLHSEEEIEEETVHGEVRRERVEAEDDSEDAEERRRRR"
BASE COUNT          326 a          571 c          409 g          361 t
ORIGIN      
        1 cccgaggctg gtgatcctca tggcgcattg cctcaaagtt cttccgtacc tcagaatcac
       61 cccgctggct catacaatac ctaccaatcc tctcccatta gatgtgcaga ctcttgacag
      121 gcgcccgtgc tgggcatggg ctggctctag cagatgtccc gtccatgccc agggacgact
      181 gcagttggcg ctggactgac tatccagtca catcagagac tacccacggc ggctaccagg
      241 ctgtacctgg ttgccctgtt gctgcctcat tccatccgtg acctgttgct tcagctcctc
      301 gcgcttctgc acctgccact ggtattgccc ctgatccatc tgtactgctt ggccagtcaa
      361 ctggctgttg ggcaccttta ctatcccctc ctgggtctcg atagtcgtga acagggagcc
      421 aatggtgacc aattttccga taggctcctg ccgtcacctc gaccccaggc tcgacctcgg
      481 cgcgcagcat cctccccagc atgaggtggg atgctgcctc tctgccaccc aggccaaagg
      541 ccagcgctac gctgcccacg atcaacgcca ggaaagcaat ccacagagca ccgacgacag
      601 tgggagcaat ctccaagatg tccagtgcgg cgatgacagc gaaggcaatg atggcaaagc
      661 gtgccacgtt ggcgaacagg tccggattgc ccattcccat agaccccagg gtgccccgga
      721 caattccagc catgaccttc ccagcgagtg cgcccaccaa cagcactatg accgccagca
      781 ccaccttggg gagataggca atcaggctgt tgatcagaac cgacacctgg ggaagcccaa
      841 gggcggtgaa cgctgccagg aagaagacca agtagactgc ccaccgtaca atccccccaa
      901 ccactgccga tggtcccgcc ctaacaccag ctttttctag gaatgtatct atctcagcgc
      961 ggtcagctac ttcattaaac cggaccaccc gtagtactct ggtgacaacc gcccccaaaa
     1021 gcttgcccag cagccatccc acgatgatca gcacgatggc ggccagcagg ttgggcaaga
     1081 aggcgataat tgccccaatg acgccgatga aggaagcctg aattccgttt agcaactcct
     1141 gcatgaggtc ctcctccagc aatgaggtcg ggcggagcct aggccccgcc ccctcggcta
     1201 ctgcgagcct taccggcgtc tgcgccgctc ttcagcgtct tcagaatcat cctcggcctc
     1261 cacccgttcc cggcggactt caccgtgtac tgtctcctcc tcgatttctt cctctgagtg
     1321 taggctgatt tgctccctct ccaccgtttc cttactgact accggttctt cccggtggag
     1381 cggcatctcc acttcctctt caccgattgc tgcccctgag gcgggccgat ttactggctc
     1441 acgctctaca aaggcagtct cccggcgtag ctccacttcc tcagagacgg gttccgtctc
     1501 cacccacttg cggagtctga cccggccata ctctacctct cgtttgccaa tctgaagttc
     1561 ttcctcgtgc cggctgatag tcacatcgcc ttggggagtt acgggatgct ggtgctcctc
     1621 ccgtatctca cctgcaggat gttgatgttg ctctcctatc cccacat
//
LOCUS       DASQSL010000434         1233 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_111769, whole genome shotgun sequence.
ACCESSION   DASQSL010000434 DASQSL010000000
VERSION     DASQSL010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1233
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111769"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1233)
                     /locus_tag="VE844_04395"
     rRNA            complement(<1..>1233)
                     /locus_tag="VE844_04395"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          230 a          392 c          306 g          305 t
ORIGIN      
        1 gcgcctccgt tacagtttag gaggcgaccg ccccagtcaa actacccacc tagcagtgtc
       61 cctgacctgg atgacaggtc gaggttagaa cgccggagtg ttaagggtgg tatctcaccg
      121 ttggctcccc caagcccgaa agcctgggtt caaagcctcc cacctatcct gcgcataaca
      181 cgccagcatt cactactaag atgtagtaaa ggtgcacggg gtcttttcgt ctagtcacgg
      241 gcaaccggcg tcttcaccgg taccacaaat tcgcagtgcc cctcgttgag acagcgccca
      301 gatcattacg ccattcgtgc aggtcggaac ttacccgaca aggaatttcg ctaccttagg
      361 accgttatag ttacggccgc cgtttaccgg ggcttcagtt cgaagcgtcg ccttgcggct
      421 aacctctccc tttaaccttc cggcaccggg caggcgtcag accctatacg tcgtgttcga
      481 cttcgcagag tcctgtgttt ttagtaaaca gtcgcctggg cctctttatt gcaactcgtt
      541 cacgcacgcg accgcaagga tcgcgcacgc tactcgagca ccccttattc cgaagttacg
      601 gggccagttt gccgagttcc taaacgagtg ttctcacttg cgcctgagga ttttctcctc
      661 gcctacctgt gtcggtttgc ggtacgggta cccacttctc tccttagagg cttttctcgg
      721 cagcatggcg tcgtcggctt tgcggggctt gcgcccctcg acatggcccc tcagggaatg
      781 tgacccaccg gattttcctg gcggatcccc ctacagacct gaacctacac gtccaatcgt
      841 aggctcgctt agcctcctgc gtccccccat cgtgataacg tggaataggt agttccggaa
      901 tgttgaccgg atgtgcatcc gctacgcctt tcggcctcgc gttagctccc gactgaccct
      961 gagcggacga accttcctca ggaaacctta ggcttacggc ggggaagatt ctcacttccc
     1021 ttctcgctac ttatgccggc agggtcactt ctcaacgctc caccagtcct ctcggtctga
     1081 cttcgctgcg ttgagaacgc tcctctacca atatggaatc ccgcaggatt ccgtctattc
     1141 tacggcttcg gtcctgtact tgagccccgt tatattgtcg gcccagagcc gcttgaccag
     1201 tgagctatta cgctttcttt aaaggatggc tgc
//
LOCUS       DASQSL010000435         1275 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_17561, whole genome shotgun sequence.
ACCESSION   DASQSL010000435 DASQSL010000000
VERSION     DASQSL010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17561"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..499
                     /locus_tag="VE844_04400"
     CDS             <1..499
                     /locus_tag="VE844_04400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012631121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glucose/sorbosone dehydrogenase-like protein"
                     /protein_id="HZC00613.1"
                     /translation="ATGAVLPVTHPLFCNSPPELPIPCPEFVLEESFRESLDVERAFA
                     QFELHSSANKFDFSTNLGFRFIGDIFVAETGAFVPVTGAKQFAGYKVVRVNRRNGQVR
                     DFVVNTGETPEEIFDPENFNKPIDVKFKDGTMLIVDFGVYEPGLFLQQPGTGKVWRVS
                     QVSDD"
     gene            502..741
                     /locus_tag="VE844_04405"
     CDS             502..741
                     /locus_tag="VE844_04405"
                     /inference="COORDINATES: protein motif:HMM:NF021505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2231 domain-containing protein"
                     /protein_id="HZC00614.1"
                     /translation="MSRAACGAPPLHSRALPIALSAIGVLLLGISGWLGGELVYVHGV
                     FAFMRLRAPEGTYCRRRRKSLRSKGFMLKLRWRSS"
     gene            738..893
                     /locus_tag="VE844_04410"
     CDS             738..893
                     /locus_tag="VE844_04410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00615.1"
                     /translation="MNRPAPYTERLQFEVPTGDTADLDEVMIAEAMMHQTVEKAKEVA
                     GGGLNTG"
     gene            996..>1275
                     /locus_tag="VE844_04415"
     CDS             996..>1275
                     /locus_tag="VE844_04415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZC00616.1"
                     /translation="MYEPIDQARRWRGRLLDVADLGPQEALYRVVHSESGFHLKAYAD
                     HQAEGPVLLMVPAPIKRAYIWDLAPGASAVRHCLSNGIRVYLIEWERPV"
BASE COUNT          262 a          342 c          386 g          285 t
ORIGIN      
        1 tgccaccggc gcggtgctgc cggtgaccca tcctctcttt tgtaattcac caccagagct
       61 gccaatcccc tgccccgagt ttgtccttga ggaaagtttc cgcgagagcc tggacgttga
      121 gcgcgcgttc gcgcagtttg aactccattc gtcggccaac aagttcgatt tttcgaccaa
      181 tctggggttc agatttattg gcgatatctt tgtagcggaa acaggggcct tcgtgcccgt
      241 cactggcgcg aagcaattcg cgggttacaa ggtggttcgc gtaaaccgac gaaacggcca
      301 agtcagggac ttcgtcgtca atactggcga gacgcctgaa gagattttcg atcccgagaa
      361 ctttaacaaa ccgatagacg tgaaatttaa agacgggacc atgttgatcg tcgacttcgg
      421 cgtgtacgaa ccggggttgt tccttcaaca acccgggacg gggaaggttt ggcgcgtgtc
      481 ccaagtaagc gatgactgaa ggtgagtcga gccgcttgcg gcgcaccgcc gctccacagc
      541 cgagctttgc ccattgcgct ctcagcgatt ggcgttctcc tgctcggcat ttctgggtgg
      601 ctcggcggcg agctggttta tgtacatggg gttttcgcgt tcatgcgtct aagggcgcct
      661 gaaggaactt actgccgcag gcgccgcaag agtttaagat caaaaggttt tatgctgaaa
      721 ctgcgatggc gttcgtcatg aacaggccgg ctccctacac tgagagactg caattcgagg
      781 taccgaccgg tgatacggcg gatctcgacg aggtgatgat cgctgaggcg atgatgcatc
      841 agaccgtgga gaaggccaaa gaggtcgcgg gcggggggct gaatactgga taaacgttcg
      901 caacgaacta tttccctatt tccgctccag gagctacccc ccccttatcc agacctgatg
      961 gtaagtaggt cgttaggtgg ctaagaatgt ggaccttgta tgaaccgatc gatcaggcgc
     1021 gccgttggcg gggcaggctc ctcgatgtag cggacctagg cccgcaggag gcactctacc
     1081 gggtggtaca ctccgaatcg ggcttccatc tcaaggccta tgccgatcat caggctgagg
     1141 gcccggtgtt gttgatggtc ccagcgccga tcaaacgcgc ttatatctgg gatctggctc
     1201 caggagcgag tgccgtacgg cactgcctga gcaatggcat ccgggtctat ctcatcgagt
     1261 gggagcggcc agtcc
//
LOCUS       DASQSL010000436         1230 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_58309, whole genome shotgun sequence.
ACCESSION   DASQSL010000436 DASQSL010000000
VERSION     DASQSL010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1230
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58309"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..188
                     /locus_tag="VE844_04420"
     CDS             <1..188
                     /locus_tag="VE844_04420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00617.1"
                     /translation="FHHPGGHQRAFLMGLAHLYNLVPYQRRAQHAGQCGVEVEGGQVP
                     TADWFLNLRAPRSALMP"
     gene            1017..>1230
                     /locus_tag="VE844_04425"
     CDS             1017..>1230
                     /locus_tag="VE844_04425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00618.1"
                     /translation="MWKKELQRYDASGTPMFEVGFNKVSALANDHRGGVWVAIDKQLM
                     RLDRTGAVLLEVDPFSKPDKIEALVTD"
BASE COUNT          279 a          339 c          409 g          203 t
ORIGIN      
        1 ggttccatca tcccggtggc caccaacggg cgtttctcat ggggctggca cacctctaca
       61 atctggtccc ctatcagcgc cgggcccagc atgcggggca gtgtggcgtg gaagtggagg
      121 gcggacaagt gcccaccgca gactggtttc tcaatctgcg tgcgccacga agcgcactga
      181 tgccatgagt ggaaaactcc atcgcctgta caggcaggcg atgagccctt ggggcgtagc
      241 gtcggatgga tgcaatccga ggtgaaatag ctgcccctga aaggtacccg tgaggcgtga
      301 ggcaagccgc caagatgcgg ggcttggctg aagaggccca tggcgagtaa acgaagtggc
      361 gaaagaccta cgggaaaagg aacccctgcc tcaagacctt gcctgagggg gcagcgaccg
      421 catcccatgg tatggcagat tccaaaggat gaccgagact ggccagtctg gcatgccagc
      481 ctcaaggatg tcagcggtca acctgctata cccgctgatc ggtcgggata ccgcgaagag
      541 cgggatgggt cagatgtaag ccaccgccta aaggtcactg cagagggcat cagggtgaac
      601 gtgggaggcc catgcgggga ggggtgctgc cccccgatga agcccatggg cgtcgggggc
      661 gtcatagtac tcggagcgcg ggaaagccgc gtacatgggg aaggacgcca ggggattgac
      721 gtggttctgg tccaataact gcctagactc ccatgaatcg gggagcaatc catcgtcccg
      781 taagacgatc gaggcggcag cgaacgcgag gaacctgaca aacccagtgg taacgctggg
      841 agcggaagtc gccaatccct ggggagccgt gtgcggtgaa agtcgcatgc acggtttcga
      901 cgcgggggtg gggaaacggg ctcgtgagag caccgcgccc tgccccaagc gaccagatcc
      961 tcacctcagg aggcttccga tgagcggtaa cacccgctac cactaaatcc ggtggaatgt
     1021 ggaaaaaaga actacagcgc tacgacgcta gcggcacgcc gatgttcgaa gtcggcttca
     1081 acaaagtgtc tgcccttgcc aatgatcacc gaggcggggt gtgggtcgct atcgataagc
     1141 agctcatgcg cctggatcgc acgggtgcag tgctcttgga agtcgacccc tttagcaagc
     1201 ctgacaagat cgaggcatta gtcacggact
//
LOCUS       DASQSL010000437         1746 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_98714, whole genome shotgun sequence.
ACCESSION   DASQSL010000437 DASQSL010000000
VERSION     DASQSL010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98714"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(246..410)
                     /locus_tag="VE844_04430"
     CDS             complement(246..410)
                     /locus_tag="VE844_04430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00619.1"
                     /translation="MQSIGGLLRLATVALEALLSVEATAPSGFSLFSGVSFGLGHDHL
                     LIYRDHSDTG"
     gene            557..1585
                     /locus_tag="VE844_04435"
     CDS             557..1585
                     /locus_tag="VE844_04435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00620.1"
                     /translation="MRGWDKNWPSRLLHALPKRSWLKRLRRLGLDVLVPLWRHVASKS
                     EATQSRWQWTWAVDDSVFHKYGEQLGLVGRWWSGQQHRVLAGIDGLLLVVVIGDGKLV
                     VPVDFAVRRPDPIGVGGPCRDKLTWAREMIDARLLALSKRGLHLPAPIITADSWFSDS
                     KLMGHVRHRHQGTFLVEGKVNYTFTLADGRHVNGRNFLEGEWPWRTHPWEPRVCYVRL
                     QAQSPTYGAVTVVIVDEPGADRYYLLCLETTLSGPVLIRRWRRRHWIEFVFRVLKHLL
                     ATESCQVHSEDAYYGHLVLRLMASFVLFYTSRVGCKGRLTMEEIIFSLKHYWRFVDME
                     PLGLQSLS"
BASE COUNT          362 a          434 c          537 g          413 t
ORIGIN      
        1 agcgctgatg gatgaattga tcgccatcca agccgctgcg gccatggacg aggggctcgt
       61 cagcccggct catcttttgg tcctggcttt tccgaacttc aattttaacg agtatgggcg
      121 cggctttctg ctcaataccc catgaaagct attcattata aagagcttat agcaaacatg
      181 ggggtcaatt ttgatccttg aaacggcggg ctgaaatcga aacgcggtgg gacatggttt
      241 cctttctatc cagtatccga gtgatcgcga tagataagga gatgatcatg tcccaagcca
      301 aacgatacgc cagaaaacaa gctaaagcca gacggcgccg tcgcctcaac gctcaagagc
      361 gcctcgagcg cgaccgtcgc caagcgcaac aggccgccga tgctttgcat cacgccctcg
      421 aagagttggg cctgcctgag accttggtga gtgaaagcga aggccgctta cagagtcagc
      481 agaagctgtt aagtaaaatt gtgggcgtca tgtttcccgc tctttttggc tgtcgcaccc
      541 ctcagagctc tgtcgggtgc ggggatggga caagaactgg ccttcgcgtc tgttgcatgc
      601 tttgcccaaa cgctcctggc ttaagcggct gcggcgtttg ggccttgacg tattggtgcc
      661 gctttggcgt catgtggcga gcaaaagcga ggcgacccaa agtcgctggc agtggacctg
      721 ggccgtggac gactcggtct tccacaaata tggcgagcaa ctggggttgg ttgggcgctg
      781 gtggagcggt cagcaacacc gcgtgctcgc gggcattgac ggccttttat tggtggtggt
      841 tattggtgat ggcaagttgg tggtgccggt cgatttcgcc gtacggcgcc ctgaccccat
      901 tggcgtgggc gggccttgtc gggacaagtt aacctgggcg cgagagatga tcgatgcgcg
      961 cctgttggcc ttgagcaagc gcggcttgca cctgcctgcg ccgatcatca cggccgatag
     1021 ttggttcagt gactccaagt tgatggggca tgtccgccat cggcatcaag gcaccttctt
     1081 agtggaaggc aaggtcaact atacctttac cttggccgat gggcgccacg tcaacgggcg
     1141 caatttcctt gagggcgagt ggccttggcg gacgcatccc tgggaacctc gcgtgtgcta
     1201 cgtgcgttta caggctcaga gtcccacgta cggtgcggtc accgtggtga tcgtagatga
     1261 gcctggggcg gaccgttact acctactgtg tttagagacg acgctgagtg gcccggtctt
     1321 gattcgaaga tggcggcggc gtcactggat tgaatttgtc tttcgggtgc tgaagcacct
     1381 gttggcaact gagtcgtgcc aagtccacag cgaggacgcc tattatgggc atctggtgct
     1441 gcggttgatg gcgagctttg tcttgtttta cacctcgcgt gtgggctgca aaggccggct
     1501 gacgatggag gagattatct ttagcctgaa gcactactgg cgctttgtcg atatggaacc
     1561 tttgggatta caatcacttt catagggtag gatcggaaaa gccgcatggc tacaggctaa
     1621 agtcagagta cggaaaaccc aggctgtttg acgcccggat gcggtacgtc aaaaaaggcg
     1681 ggtttccgga atatatttac cgtcgaatta gtcaataata tagaatcatt atggagaatc
     1741 aatttg
//
LOCUS       DASQSL010000438         1262 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_44633, whole genome shotgun sequence.
ACCESSION   DASQSL010000438 DASQSL010000000
VERSION     DASQSL010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1262
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44633"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..532
                     /locus_tag="VE844_04440"
     CDS             <1..532
                     /locus_tag="VE844_04440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00621.1"
                     /translation="LRVPMDALAHRGAAVTLEDCECLGVRVSERTDGETVAKALTEIF
                     ATAGAPVAVIKDGGGDLSKGVGLWKERAGKPAVWTIDDLGHVLANALKAQFDNTRAFQ
                     RFVAIIHRGAARLRQTPLAFLMPPKLRTQGRFQGITRLGQWAEKILKALAGSGCAQDD
                     SLRAKLRSAMTGLASL"
     gene            554..1009
                     /locus_tag="VE844_04445"
     CDS             554..1009
                     /locus_tag="VE844_04445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00622.1"
                     /translation="MTAHRVAAVLTILKNQGLHPDTYRQCCQLAEQLPPRCKVKKRLL
                     NWLQRQLHIQRQLGIQPLLVSSDIIESLFGMFKHVTARGTQAEMNRTVLVLPILCGKH
                     EGQVLAHALAHTSHRDLQEWEKQNIPATLRQQRHAFFHANERDQKPGKL"
     gene            complement(1081..>1262)
                     /locus_tag="VE844_04450"
     CDS             complement(1081..>1262)
                     /locus_tag="VE844_04450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00623.1"
                     /translation="FKHSSGFTSSLYEFVSNCQEFSLVPLKELTKGTLRRALETIFRG
                     LDDTQGVKSPPQLPA"
BASE COUNT          287 a          355 c          355 g          265 t
ORIGIN      
        1 attaagggtg ccgatggatg cgctggccca ccgcggcgcg gcggtcaccc tggaagactg
       61 tgaatgtctt ggtgtgcgtg tcagcgaacg caccgatggc gagaccgtgg cgaaggcgct
      121 gacggagatt ttcgccaccg ctggtgctcc ggtggcggtg atcaaggacg gtggtggaga
      181 cctgagcaag ggggtagggc tgtggaagga acgtgcgggc aagcccgccg tgtggacgat
      241 tgacgatctc ggtcatgtcc tggccaatgc gctcaaagcc cagttcgaca acacccgagc
      301 ctttcagcgt tttgtggcga ttatccatcg gggcgcggcc cgtttgcgac aaaccccact
      361 ggcctttctt atgccaccca agctccgtac gcaggggcga tttcaaggga tcactcgcct
      421 gggccaatgg gctgaaaaga tactcaaggc cttggcggga agcgggtgtg ctcaagacga
      481 cagcctgagg gctaaacttc gctccgcgat gacgggcttg gcctccctat gaccgttcat
      541 cgagcgcttt gcgttgaccg cgcaccgcgt ggccgcggtc ttgacgatcc tcaaaaacca
      601 aggtctccat ccggatacgt atcggcaatg ctgccaattg gctgagcaac tgcccccgcg
      661 ctgcaaggtc aaaaagcgac tgctgaattg gttacagcgc cagcttcaca tccagaggca
      721 attaggcatc caacccttgc tcgtcagcag tgacattatc gagtccctct tcggtatgtt
      781 taaacacgtc accgcacgag gtacccaagc ggagatgaat cgtactgtct tggtgctgcc
      841 catcctctgc ggaaagcacg aggggcaggt cctcgctcac gcgttagccc acacctctca
      901 tcgcgatctt caagaatggg aaaaacaaaa tatacccgct acgctgcgtc agcaacggca
      961 tgcttttttt catgccaatg agagggacca aaaaccggga aagctatagc gcatatatga
     1021 cctgtgattt cgacagccta ggtccctcca ccccagtcct gtcccatatg gaaaacacca
     1081 tcaagctgga agttgcggag gacttttaac accctgggtg tcatcaagtc ctctaaaaat
     1141 agtttccaat gcacgacgta aggtaccctt ggtgagctcc ttgagcggca cgaggctgaa
     1201 ttcctgacag ttgctcacaa attcatagag actgctggta aaaccgctgc tatgtttgaa
     1261 ag
//
LOCUS       DASQSL010000439         3193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_154611, whole genome shotgun sequence.
ACCESSION   DASQSL010000439 DASQSL010000000
VERSION     DASQSL010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3193
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154611"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(53..532)
                     /locus_tag="VE844_04455"
     CDS             complement(53..532)
                     /locus_tag="VE844_04455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004580362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-archaeol synthase"
                     /protein_id="HZC00624.1"
                     /translation="MAIVTVLLLLGVANGAPILLNKLLDRRFVYPVDGGLRWRDGRPL
                     FGASKTVGGIIAAVAATALAAKWLGLSFGFGALFGALAMLGDLISSFVKRRRGLKPSS
                     MALGLDQIPEALLPTVAAAFYLELTLLDVVLIVALFFSLEVILSPLLFLLNIRKRPY"
     gene            720..1652
                     /locus_tag="VE844_04460"
     CDS             720..1652
                     /locus_tag="VE844_04460"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZC00625.1"
                     /translation="MTDSSYEIIIVGGGIQGAGIAQAAAAAGYRVLLLEKQAPAAGTS
                     SRSSKLIHGGLRYLESGQFRLVWEAIRERERLLRLAPDLVRYVPFLIPVYAKSLRRPW
                     QIRAGLCVYALLAGLKPQSRFHAIKKTAWRSLGGLRQEGLRAVFSYPDAQTDDTALTR
                     AVLASAAALGAHILYPARFISAARTSQGYRIEYVFNDQSYSCCAQVLVNAGGPWVNRI
                     QDRISPAPAKLEVELVQGTHLHFDQPLSSAIFYGESSRDHRPVFLYPGGRVPWWVPPR
                     PSLAVIRIRSNPCLRRSPTLRKPCSSIFPTIAGV"
     gene            1550..1942
                     /locus_tag="VE844_04465"
     CDS             1550..1942
                     /locus_tag="VE844_04465"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00626.1"
                     /translation="MFSGDPDQVEPLPEEIAYLKETLQFYFPHYSGRLIGSMAGLRVL
                     PQGSGKPFHRSRETVLVADENQRPHLIAVYGGKLTTYRTTAARIMRLMGKTLPRRTPI
                     AYTDRLPLLRSGGVSMRCERDKLTMEQK"
     gene            2050..>3193
                     /locus_tag="VE844_04470"
     CDS             2050..>3193
                     /locus_tag="VE844_04470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012475827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAFs-binding domain-containing protein"
                     /protein_id="HZC00627.1"
                     /translation="MTRPLCFVLMPLGQKPSPSGRLIDFDAVYQELIAPAIAAARLEP
                     LRADEEMTGGIIHKPMFEQLILCEYAVADLTTANANVFYELGLRHAVRPASTLLLFAK
                     DASQLPFDVALLRALPYALGPDGKPANSKADKTALADRLREARKAAADSPVYQLMEGF
                     PDIQRFKTGVFRERVQYSEALKKKLAAARKQGAEAVRAVEQALGNIADAEAGVVIDLF
                     LSYRAVKAWPDMIDLVPKMSSPLAATVMVQEQLGLALNRAGRGDEAEQVLLDLIARRS
                     PSSETYGILGRVYKDRWEETAKNGDTFLAQGLLSKAIDAYLKGFEADWRDAYPGINAV
                     TLMELKEPPDPKREKLIPVVAYAAERRIAGSKPDYWDHATRLELAVL"
BASE COUNT          663 a          957 c          926 g          647 t
ORIGIN      
        1 tgcctgcctg agatcacctt gcaccgattg caccgggcca cgtaagcggt gttcaatacg
       61 gccgcttgcg gatgttgagc agaaacaaga gcggcgaaag gatcacctcg agcgagaaaa
      121 acaaggccac gatcaggacc acatcgagga gggtaagttc taggtaaaag gccgctgcga
      181 cggtgggaag caacgcttcc gggatctgat cgaggcctag ggccatgctg ctcggtttta
      241 gcccgcgtcg tcgtttcaca aaactggaga tcagatcgcc gagcatggcg agggcgccga
      301 atagcgcccc gaaaccaaag gatagcccga gccattttgc tgccagggct gtcgccgcga
      361 cagccgctat gatcccccct acggtcttgg aagccccaaa cagcggccgt ccatcccgcc
      421 atcggaggcc accatcaacg gggtaaacaa agcgccggtc aagcagctta ttcagtagga
      481 tcggtgcacc attggctact ccaaggagca gcaaaaccgt aactatcgcc atctctccct
      541 atctctttac cgtatttggc ccggcggcct cgggtaaaac cctttacctg atcaaaagat
      601 atcattgaat gatatgattt agctaggctt tttgatcggg ttcacaggtg catggtttat
      661 cgcctcgagg cggccttgcg atcagcgcct caatcaccct tgctttgcaa gcagcccgca
      721 tgaccgattc gtcctatgag atcatcatcg tgggcggcgg gatccagggc gcgggcattg
      781 cccaggcagc cgcggcggcc ggctatcggg ttctgttact ggagaaacaa gcacccgcag
      841 cgggcacatc ctcgcgatcc agcaaactca tccatggcgg cctgcgctac ctcgagagtg
      901 gccaattcag gctggtatgg gaggcgatcc gtgaacgcga gcgcttgtta cgtctcgctc
      961 ccgatctggt ccggtatgtg ccttttctca tcccggtcta tgcgaagagc ctccgccgcc
     1021 cctggcagat ccgggcgggc ctgtgcgtct atgccctgct cgcgggactc aagccgcaga
     1081 gccgattcca tgctatcaag aaaaccgcct ggagaagctt gggtggactc cgccaggagg
     1141 ggctgcgcgc cgtgttttcc tatcctgatg cccagaccga cgatacggcc ttgacccgtg
     1201 cggtgcttgc ctcggcagcc gctctcgggg cacacatcct ttatccggcg cggtttatat
     1261 ccgccgccag gacgtcccag ggctatcgca ttgaatatgt ctttaacgat caatcctatt
     1321 catgctgcgc acaggtgctt gtgaatgcag gcggaccctg ggttaatcgt attcaagacc
     1381 ggatctcgcc cgctccagcc aagctcgagg tggaactagt ccagggtacc cacctgcatt
     1441 ttgatcagcc gttgagcagc gctatctttt acggtgagtc gtcgcgcgat cacaggcccg
     1501 tgtttttata ccctggaggc agggtaccct ggtgggtacc accgagacca tctttagcgg
     1561 tgatccggat caggtcgaac ccttgcctga ggagatcgcc taccttaagg aaaccttgca
     1621 gttctatttt ccccactata gcgggcgttt gatcggcagt atggccggcc tgcgggtgct
     1681 tccccaaggg tcggggaaac cctttcatcg ctcacgggag accgtccttg tggccgacga
     1741 aaaccagaga cctcacctca tcgccgtcta tggcggcaag ctcacgactt accggaccac
     1801 ggcagcccgc atcatgcgac ttatgggcaa aacgctacct agaagaacgc ccatcgcgta
     1861 taccgaccgg ttacctttgc tcaggagtgg gggagttagc atgaggtgcg aacgtgataa
     1921 actcacaatg gagcagaagt agatccgaaa gaccttgggt aataataatg aataatgaac
     1981 gtatcattac cagttgctgg gtgaccatcg cacgtaaatt ttgagaacca cggattcgga
     2041 gaccctgcta tgactcgtcc tctatgcttc gtcctcatgc ccctcgggca aaagccttcc
     2101 ccctccggta ggcttatcga tttcgacgcg gtttaccagg agcttatcgc gcccgcgatt
     2161 gcggcggcca ggctcgagcc cctgcgcgcc gatgaggaga tgaccggtgg gattatccat
     2221 aagcccatgt tcgagcagtt gatcctctgc gaatatgcgg tggcagacct caccaccgcc
     2281 aacgccaatg tcttctatga gctgggcctg aggcacgcgg tgcggccggc gagcacgctc
     2341 ctgctgttcg ccaaggatgc tagccaattg ccctttgatg tcgcgctgct gcgcgcgctg
     2401 ccctacgcgc tcggtcccga cggtaaacca gccaatagca aagctgacaa aacagccctg
     2461 gcggatcgcc tgcgcgaggc acgcaaggcc gcagccgata gcccagtata tcaattgatg
     2521 gaaggtttcc cggacatcca gcgcttcaag accggtgtgt tccgcgagcg cgtgcagtat
     2581 tcggaagcgc tgaagaagaa actggctgcc gcgcgcaagc agggggccga ggcggtgcgt
     2641 gccgtggagc aggcactggg caatattgcg gatgccgagg ccggagtcgt catcgacctc
     2701 ttcctctcct accgggcggt caaggcctgg ccggacatga tcgacctggt tcccaagatg
     2761 tcctctcctc tggccgcgac cgtgatggtg caggagcaac tggggcttgc cttgaaccgt
     2821 gctggccggg gtgatgaggc ggagcaggtg ctgcttgacc ttattgcccg acgcagtccg
     2881 agtagcgaga cctatggcat cctcgggcgc gtgtacaaag accgctggga ggagacggcc
     2941 aagaacggcg ataccttcct tgctcaaggt ctgctgagta aggctatcga cgcctatctc
     3001 aagggcttcg aggccgactg gcgcgacgcc tatcccggca tcaatgccgt caccctcatg
     3061 gaacttaaag aaccgcccga ccccaagcgg gagaaattga tcccggtcgt cgcctatgca
     3121 gctgagcgac gcatcgccgg aagtaagccc gattactggg atcatgccac gcgcctggaa
     3181 cttgccgtcc ttg
//
LOCUS       DASQSL010000440         1483 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_154629, whole genome shotgun sequence.
ACCESSION   DASQSL010000440 DASQSL010000000
VERSION     DASQSL010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1483
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154629"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..957)
                     /locus_tag="VE844_04475"
     CDS             complement(<1..957)
                     /locus_tag="VE844_04475"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020508006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HZC00628.1"
                     /translation="MNLNFLDFEQPIAELEAKIEELRLLNNGLNGDAGIDIKDEIQRL
                     CERSRDLTKSVFSDLSPWQISRLARHPQRPYTQDYVARIFTGFEELHGDRAFGDDPAF
                     VCGIARLEGKPIALIGHQKGRNTNENLHCNFGMPRPEGYRKTLRIMRLAEKFKLPLFT
                     FIDTPGAYPGIDAEERGQSEAIARNLMVMVDLKTPIISTVIGEGGSGGALAVGIADRL
                     LMLEYGTYSVISPEGCASILWKSADMAEKAAEAMGMTASRLFELGLIDEIVNEPLGGA
                     HRNIEAISETLKGVLITTLEKLEHSTLDELLATRYRRLMGIGK"
     gene            complement(1001..>1483)
                     /locus_tag="VE844_04480"
     CDS             complement(1001..>1483)
                     /locus_tag="VE844_04480"
                     /inference="COORDINATES: protein motif:HMM:NF013499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HZC00629.1"
                     /translation="LVAGLRTNTSKRGRMAVATLEDGSGRVEVVIYAETLQKYTELLV
                     KDRLLIVDGVCNIDELSGGLTLIAERIFDLDGARQAFAKRLVLRVDSVQAANGFIPEL
                     KDILDSYRRGPCLVAIDYHQPGAYACLTLGQDWRVYPTDALLDSLRSVLGEDCVRLEY
                     "
BASE COUNT          358 a          445 c          359 g          321 t
ORIGIN      
        1 tttcccgatc cccatcaaac ggcgataacg ggtagcaagt aactcgtcta gcgtagagtg
       61 ctcgagcttc tctaacgtgg ttattaaaac ccccttcagg gtttccgata tcgcttcgat
      121 attccggtgg gcgcccccca aaggttcatt gacgatctca tcgatgagac cgagctcaaa
      181 caggcgtgaa gccgtcatcc ccatcgcctc cgccgctttt tcggccatat ctgcactctt
      241 ccacaggatc gaggcgcatc cttcggggga gatcaccgag taggtgccgt actcgagcat
      301 taacagacga tcggctatgc caacggccaa ggctccccca gatccccctt ccccaatcac
      361 ggtcgagatg atcggtgtct taaggtccac catgaccata agattccgcg caatcgcctc
      421 gctctggcct cgttcttcgg catcgatccc gggataagcc cccggggtat cgataaaggt
      481 aaataaaggc aatttaaatt tttccgcgag ccgcatgatc cgcaaggtct tccgataacc
      541 ttcaggacgt ggcatgccga aattgcagtg gaggttctca ttggtgttgc gccccttctg
      601 atggccgatc aaggcaatgg gtttgccttc caagcgggcg atgccacaca caaaggccgg
      661 atcatcccca aaggcgcggt caccatgcaa ctcctcaaaa ccggtaaaga tccgagccac
      721 ataatcctgg gtatagggtc gctgcggatg gcgcgcaaga cgcgagatct gccagggact
      781 caagtcggaa aagaccgatt ttgtcagatc tctcgaacgc tcgcacaagc gttggatctc
      841 atctttgata tcgatcccgg catcgccatt gaggccgtta ttcaagagac gtaattcctc
      901 gatcttagcc tcaagttcag ctataggttg ctcaaaatcc aaaaaattta ggttcatacg
      961 tatttaattt aaggtgtgcc caaaaatcgc cttgtgtaac ctaatactcg agcctaacgc
     1021 aatcctcacc caacaccgat ctcaagctat ccaatagagc atcggtagga taaacgcgcc
     1081 aatcttgccc gagcgtcagg caggcgtaag ccccgggctg atgataatca atggctacaa
     1141 gacagggacc tcggcggtag gagtcaagaa tatccttaag ctcagggata aatccattgg
     1201 cggcttggac tgaatcgacc cgcaacacca gccgcttggc aaacgcctgc cgggcgccat
     1261 cgagatcaaa gatccgctcg gcgatgagag tgagcccgcc gctcagttca tcgatgttgc
     1321 acacaccgtc cacgatcaac agccggtcct tcaccagaag ttctgtatac ttttgcagcg
     1381 tctcggcata gatcacgacc tccacccgcc cgctgccatc ctccagggta gcgacggcca
     1441 tacgcccgcg cttgctcgta ttggtccgca aacccgccac cag
//
LOCUS       DASQSL010000441         1045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_58334, whole genome shotgun sequence.
ACCESSION   DASQSL010000441 DASQSL010000000
VERSION     DASQSL010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58334"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(182..490)
                     /locus_tag="VE844_04485"
     CDS             complement(182..490)
                     /locus_tag="VE844_04485"
                     /inference="COORDINATES: protein motif:HMM:NF016430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor"
                     /protein_id="HZC00630.1"
                     /translation="MDHGSRFNATEILEALRQHDRRTWEDLYNAQWEPLCAFIRVHLG
                     EALACRVDPEDIAQEVFCRAYSSITRFRGEARLETWLRSIAHHTITAIVRERSLERQP
                     "
BASE COUNT          216 a          299 c          316 g          214 t
ORIGIN      
        1 gtgtgtcgct cagcctgagt agtgtggttg ggctttcgtc ctgagccata attgagacct
       61 ccttgacgcg cccaaggatt accgccctgg aaggcggcgc ctcgatgccg tggcaagggg
      121 tggcccgcgt gaggcaaagg caaacggtca cgaagccccc catcgcgctc tggagcccgg
      181 ttcacggctg ccgctcgaga cttcgctccc ggacgatagc ggtaatggtg tggtgggcga
      241 tgctcctcag ccaggtttcc agtcgagcct cccccctgaa gcgtgtgatg ctgctgtacg
      301 cgcgacagaa cacctcctgt gcgatatctt ccgggtcgac cctacaggcg agggcttcgc
      361 ccaggtgcac acgaatgaag gcgcataacg gctcccattg agcgttatag aggtcctccc
      421 acgtccgacg gtcgtgctgg cgcaaggcct caagaatttc cgtggcgttg aagcgacttc
      481 cgtggtccat cagctacccc taaggcagct aggctctgct gacgaattcc ctcaccatcc
      541 gtagtgccat gatgtgtatg aagggtcaga aacatccggc accgtggctc gtcaccagtc
      601 acaacccaac gaaaccgttt catattattg aagaaacgcc ccgttgtcgc cagtcatacg
      661 tacgccccag cgtcgtagag gattggccgc tggcgatgtt gtcgagatgg gatgatcggc
      721 ggcacctcgg agcgtaagat taaaccggac ctctgtttct aagtgagcaa agaatatgcc
      781 agtaatgagc gtcgcagctg gccagagcac ctcggttctc agggggccga tcactcgagg
      841 aaccgcgtgt agatgacctc cagaagggtg agaggcttga aagccttcga gctgcggtga
      901 gcgacgtggc tcggctacct ttcttctcaa tatgaaagaa gggagatctc attctgagac
      961 gccacaagtc tgttcttccg ggggaatggg caacatgatc ccggtcgggc gttttcccaa
     1021 gcgggaatga gggccaacgc ggtgc
//
LOCUS       DASQSL010000442         1074 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_58337, whole genome shotgun sequence.
ACCESSION   DASQSL010000442 DASQSL010000000
VERSION     DASQSL010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58337"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(519..1043)
                     /locus_tag="VE844_04490"
     CDS             complement(519..1043)
                     /locus_tag="VE844_04490"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HZC00631.1"
                     /translation="MRAITNIELKRVLGVGAGRRAVDIQKTISIDAPVERVFALWANY
                     QNFPRFMSHVRQVQDLGNGRSRWVVTGPAGTTVEWDAVVTSYIPHQELAWQTEPDSIV
                     QHTGRVRFQSQADGGTTVNIHLSYNPAVGGLGHVVASLFGADPKRQMDDDLLRMKTFI
                     ETGKVPSDATWQRA"
BASE COUNT          218 a          316 c          313 g          227 t
ORIGIN      
        1 tggggctatg ctcataaaac cgtctgtcac agcaaaggcg aatatgcgcg tgatgaagac
       61 ggcgacggat tttgtgaagt gcacgtcaac acgatcgagg ggttctggtc attgctccga
      121 tcgtggtgac gtccacagcg gggaatcgcc caagaacggc ttccgctcta tctcggattc
      181 tttgagttca tccacaatgt tcgcaagcga ggaaaagcgc ttctcggatc tcttctctcg
      241 ttattgctga cttagctccc agaaacagct attgagcctt ccctttttct acgttcaatt
      301 cacatcgcag ggccgtatga ttccttctca ccccaccctc accctccccc gtcaaggggg
      361 agggggtcct gttggccctc ctgacaagat cggtgccgaa ccgtattgcc ctctcccatc
      421 gcgggggagg gggctgtggg ctcaacacgt cgctctaatg acttacccct gagagcccca
      481 gaaggggtga tggctggcac gataagcctt agagaatgct aggccctttg ccaggtggca
      541 tcagacggga ccttccccgt ctcgatgaag gtcttcatac gcaggagatc gtcatccatc
      601 tgccgtttcg gatcagcccc gaagagcgac gccacgacat ggccgaggcc cccgacggcc
      661 gggttgtaag acaagtggat gttgacggtc gtacccccgt cggcttgtga ctggaaacga
      721 acgcggccgg tgtgctgcac gatcgagtcg ggctcagtct gccaggctag ctcctggtga
      781 gggatatacg acgtgacgac agcatcccac tccacagtcg tgccggctgg gccggttacc
      841 acccagcgag agcggccatt gccgaggtcc tgcacttggc gcacgtggga catgaagcgc
      901 gggaagtttt gatagttcgc ccagagcgcg aagacgcgct cgacgggggc gtcgatgctg
      961 atagtcttct ggatatcgac ggcgcgtctg ccggcaccca cacccagcac gcgcttaagt
     1021 tcgatgttgg taatagcgcg catcagcatg ctcatacctg caaaaccaat ggcg
//
LOCUS       DASQSL010000443         1153 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_166566, whole genome shotgun sequence.
ACCESSION   DASQSL010000443 DASQSL010000000
VERSION     DASQSL010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166566"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(134..808)
                     /locus_tag="VE844_04495"
     CDS             complement(134..808)
                     /locus_tag="VE844_04495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00632.1"
                     /translation="MLVPFVGVVHRHLKAWSLGPVLQCLERFLDEPTLRTTLIQKPKA
                     FTRPQGLYSLPVTLKTFLMQCLAQDHSCRTAVATAKDRGWLPPHASPGTAAYCRARDA
                     LAAEGLQRTVEHTAEALSSRVSDDHLWRGRQVQVVDGTGIALPDTEANQEDYPQPSEQ
                     KPGCGFPVLRLVAFMSLATGAVSRYCIATLHDHEQRLFQALRAHLKEGEVVLGDRNFG
                     TFATLV"
BASE COUNT          260 a          307 c          346 g          240 t
ORIGIN      
        1 atggggggcg ataatggtgg ggagcgcgcc agcgcacgag ggcatcatct tgacccagac
       61 gtttgaccgt gtccccccca gctccgcggg actgatggcg acgaaagacg ccatcgaccc
      121 cttgacgctt gagctacacc agagtggcaa aggtcccaaa gttacggtcg ccgagcacca
      181 cctcaccctc cttgaggtgc gcgcgaagcg cttggaaaag gcgttgttca tgatcatgca
      241 gcgtcgcgat gcaatagcgg ctcaccgcac cggtggccag cgacatgaag gccaccagac
      301 gcaagacggg aaagccgcag ccgggctttt gctccgaagg ctggggatag tcctcttgat
      361 tggcctcagt atcaggcagg gcaatgccgg tgccatcaac gacttggacc tgtcggcccc
      421 gccacaggtg gtcatctgag acacggctgc ttagggcctc agcggtgtgc tcaacagttc
      481 tttggagccc ctcggcggcc aaggcatcac gggctcgaca gtaggcggcc gtaccgggcg
      541 aggcatgggg cggtagccag ccacgatctt tggcggtggc gaccgcggtg cgacacgaat
      601 gatcctgcgc gagacactgc atgagaaacg tcttgagcgt gacgggcagc gagtagagac
      661 cttgggggcg ggtaaaggct ttgggcttct ggatcagcgt ggtgcgcaac gtgggctcat
      721 cgagaaatcg ctcgaggcac tggaggacgg gtcccagcga ccaggctttg aggtgacggt
      781 ggaccacacc gacgaaagga actaacatga tatacctccg atgcgcaaag ggtgatggac
      841 actttgatct tttcgcattg gaggtttttt tgtgcttcga ggtcaagccc aaagagtcga
      901 gctcctgctg ccaattctaa ggtcttgaat gaaaaccgtt tggggctacg tcagtgccat
      961 tcgagtatac ccgaatggca ctgacgtata gacaatttta attttatcaa ctggttgtct
     1021 aatctcttag gttgaagatt ccgcccaagt caaaatgtaa atggtatgac caacctgctg
     1081 atccatacag tggttcttta acctcctaca gtgttgatca acattgcatt cagatccata
     1141 tccgatcaga atc
//
LOCUS       DASQSL010000444         1749 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_58354, whole genome shotgun sequence.
ACCESSION   DASQSL010000444 DASQSL010000000
VERSION     DASQSL010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1749)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1749)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1749
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58354"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(270..1580)
                     /locus_tag="VE844_04500"
     CDS             complement(270..1580)
                     /locus_tag="VE844_04500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1182 family transposase"
                     /protein_id="HZC00633.1"
                     /translation="MLTANPTTQSLVDDSPSSAAAPKPQPRLRCADRQTLLPAMLLED
                     LLAPEHLARTVWQFVQGLDLTPLLESIRSVEGRPGRPALDPKLLVALWLYATIEGIGS
                     ARAVAWLCANHHGFRWLCGGVEVNYHTLADFRVAHLDFLDELLTHSVATLMEQDLVDL
                     NRVAQDGLRVRASAGAASFRRRPTLERCLEEARAQVQRLRDEVANDPGEAARQQQKAR
                     ERAAREREERIHKAMEAKKKADNKEKARVSTTDPEATVMKMADGGFRPAYNVQFSTDT
                     NAQIIVGVEVATCGSDQGQMVPMVEQIYERYEQYPQDVLVDGGFVKHDDIDTVSAPEQ
                     GCTVYAPVPKPKEASKDRYAPRAMDSAAVAAWRQRMASAEAHAIYKDRAATAECVNAL
                     ARNRGLRQLLVRGIAKVKAIALWYAIAHNLLRAVSLRAALATHA"
BASE COUNT          313 a          558 c          500 g          378 t
ORIGIN      
        1 tattcattga gatctttatt gcttgcttct cttaagatca agcgcttgaa tttgttgaga
       61 aagcctagtt accggacaca acatgtaaat ccggccgcct gcgtttgagg ttaatgttac
      121 taagctcaga gcctgtgaaa aaattggctt tttcgtcctc taccgacacc tcgggcaggt
      181 gctggtcagg ctgcgggctt cggccacgct ctcagatccc ctttgccgac tccgcgggcc
      241 tgccttgacc ttccgcatcc tcttctctcc taagcgtgcg tcgccagcgc cgcgcgcaga
      301 ctcactgccc gcagcaggtt gtgcgcgatc gcataccaca gcgcgatcgc tttcaccttg
      361 gctatgccac gcaccaacag ctgacgcagc ccccggttgc gcgctagggc gttcacgcac
      421 tccgccgtcg ccgcgcggtc cttgtagatc gcgtgcgctt cggcactcgc catccgctgc
      481 cgccatgcgg ccacggccgc actgtccatg gcccgcggtg catagcgatc tttgctggcc
      541 tctttgggtt taggcaccgg cgcatagacc gtgcagcctt gctccggcgc actgacggtg
      601 tcgatgtcat catgcttgac aaagccacca tcgaccagca cgtcttgggg atactgttca
      661 taccgctcat agatttgttc gaccatcggc accatctgcc cctggtcgct gccgcaggta
      721 gccacctcaa cccctacgat gatctgcgcg ttcgtatcgg tgctgaactg gacgttgtag
      781 gccgggcgga aacccccgtc ggccatcttc atgacggtgg cctcggggtc ggtcgtcgag
      841 acccgggctt tctccttgtt gtcggccttt ttcttcgcct ccatagcctt gtggatccgt
      901 tcttcccgct cacgggcggc ccgttcccga gccttttgtt gctgccgagc cgcttctccc
      961 gggtcgttcg ccacttcatc ccgcaggcgc tgcacctgtg ctcgcgcctc ctccaggcat
     1021 ctctccaggg tcgggcggcg ccgaaacgaa gcggcccccg cactggcccg cacgcgtagg
     1081 ccgtcttggg ccacgcgatt gagatcgacc aggtcttgct ccatcaaggt ggccacactg
     1141 tgggtgagca gctcatccag gaaatcgagg tgcgcgacgc gaaagtcagc cagggtgtga
     1201 tagttgacct caaccccgcc acagagccag cggaagccgt ggtggttggc gcacagccaa
     1261 gctaccgccc gagcactgcc gatgccctca atagtggcat acagccacaa ggctaccaac
     1321 agcttgggat cgagtgcggg ccgtcccggc ctgccttcca ccgatcgaat gctctcgagc
     1381 agaggtgtca agtcaagccc ctggacgaac tgccagaccg tgcgggcgag gtgttcgggg
     1441 gccaacaagt cttccaaaag catggccggc agcagggttt gccgatcagc acagcgcaga
     1501 cgcggttggg gcttgggggc agcagcggag gatggcgagt cgtccactag ggattgggtc
     1561 gtcggattgg cagtcaacat cggaaaaagt ggagaaggaa aagattcgga ttcatactct
     1621 catgatacac cgaaaactta ttcggctgac gtgtagctag attatttcac aagctctgag
     1681 gcgaccttaa ggatctcggc acggtgagcc tcaaagtacg ctttggccct tctgtcatcg
     1741 accgcgtcc
//
LOCUS       DASQSL010000445         1003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_154670, whole genome shotgun sequence.
ACCESSION   DASQSL010000445 DASQSL010000000
VERSION     DASQSL010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154670"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1003)
                     /locus_tag="VE844_04505"
     CDS             complement(<1..>1003)
                     /locus_tag="VE844_04505"
                     /inference="COORDINATES: protein motif:HMM:NF033550.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ISL3 family transposase"
                     /protein_id="HZC00634.1"
                     /translation="LPLCGRQVILRLRPKRYRCRYCEGAVTTTERADWYDAKAGCTKT
                     YADFLLLELVNGTLQDVSQKHDVTYDSVRGVLKRYVKGEVDWSPIKALRLLGLDEISL
                     LKGHSDFVTLVSAHDEQGRPIVLAVLKGREKQTLVDFLKTIPTRLQDPIKEVCTDLYD
                     GFIHAAEEVLPQAQIVADRFHVAKLYRAAVDELRKTELKALKGVLTKEEYAGLKGVLW
                     ALRKRREHLAPEEHALLDRLFEASPLLRKAYTLREKLTRLFDKERSKKSGRRAIRRWM
                     AAVRESGLDCFDKFLATLENRMDLITNYFISRSSSGWVEGLNNKIKVLKRRAYGVKNL
                     "
BASE COUNT          196 a          284 c          288 g          235 t
ORIGIN      
        1 agatttttaa ccccataagc gcggcgcttg agcaccttga ttttgttgtt cagtccttca
       61 acccagccgc tcgatgaacg actgatgaag tagttagtga tgaggtccat tcggttttcc
      121 aaggtggcga ggaatttgtc gaaacagtcc agaccgcttt ctctgaccgc agccatccac
      181 cggcggatcg ctcggcggcc ggatttctta gagcgttctt tgtcaaagag gcgtgtcagt
      241 ttttcgcgca gggtatacgc cttgcgcagc aagggggaag cctcaaacaa ccgatcgagg
      301 agggcgtgct cttccggcgc caggtgctcg cgccgctttc gcaaggccca cagcacccct
      361 ttcagtccgg cgtattcttc tttcgtgagg acccctttga gcgctttcag ctcggtcttg
      421 cgcaactcgt caacggccgc gcgatagagt ttggccacat ggaagcgatc cgcgacgatc
      481 tgggcctggg gcaacacctc ttccgcggcg tggatgaagc cgtcatagag atcggtgcac
      541 acttctttga tcgggtcttg caatcgcgtg ggaatggtct tgaggaaatc gaccagcgtc
      601 tgcttctcgc ggcctttgag caccgccaac acgatgggcc ttccttgctc atcgtgcgcg
      661 ctgaccagcg tgacaaaatc ggaatgccct ttgagcagtg agatttcatc cagtcccagg
      721 aggcgtagag ctttgattgg gctccaatcg acttcgccct tgacgtagcg tttgagcacg
      781 ccgcgcacac tatcgtaggt tacatcgtgc ttttgcgaga cgtcttgaag ggtgccgttg
      841 accagttcga gtaggaggaa gtccgcatag gttttggtac aaccggcttt ggcatcgtac
      901 caatccgctc gctcggtggt ggtcacggcg ccctcgcaat agcgacaacg atagcgcttg
      961 gggcgcaacc gcagaatcac ttgccgacca cacagcggca gat
//
LOCUS       DASQSL010000446         1027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_140672, whole genome shotgun sequence.
ACCESSION   DASQSL010000446 DASQSL010000000
VERSION     DASQSL010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140672"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(196..420)
                     /locus_tag="VE844_04510"
     CDS             complement(196..420)
                     /locus_tag="VE844_04510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00635.1"
                     /translation="MRKTLLLLALAAVIVLAFASPALAQLPPTGGQLPTTGGQLPTTG
                     GPALVPVVFGLLSVVGLGLSTMAYLRRRRR"
BASE COUNT          199 a          303 c          306 g          219 t
ORIGIN      
        1 agagcaacga ggcggagtcc cctacggcgg gccgtcggac ctatgggcaa agtagaaact
       61 tgtgatgggg tcggcacgtt gcggacggta agctagaggc gacggcagcc ccctgctagg
      121 gggtaggcgc aagcttcaag cgcttctagc gaggggtagg aaggcgggta ggctacccct
      181 aactactagt aaagctcagc gcctgcgacg acgcaggtaa gccatcgtag aaagcccaag
      241 gcctactacg ctcagcaagc cgaaaacgac cggcacgaga gcgggaccgc cggtggtagg
      301 tagctgcccg ccggtggtag gtagctgacc accggtagga ggcagctgcg ccaaggcggg
      361 ggacgcgaac gccaacacga tcaccgcagc tagggccaac aaaagtagcg tcttcctcat
      421 gagtgctcct tagtatgttc gttggtagtg cgagtcttcg gggtgcgccg cccaccttcc
      481 tatgccgatg gcacacgcta ccatgccacg tacgttccca aaacgagtct gtgtaatttc
      541 tcatcacctt cttagtaccc tcttatgttc gggtggcaca ctgacagtag tggctctagc
      601 gtgctgcctc tcagtggcgc actagccgtc ctggccggac aactggtcct tcttggacac
      661 ctttcttcct tcacccagcg ttcttcatcc tttgtctggc cagactcctt tcgtcgccgg
      721 gccctttgtg cccggccttc ttcttcctct tcgtacagtg taggaaccgg aggggggtac
      781 ccttagattt ggtgacaggg gtgaccttcc aagagcatta actagaggca acggggcagc
      841 cgctactgat ggggggtagg cgtaaaaggc gattatcccg ttgacgcgat atgctcccgc
      901 cttgcctgtc accaagccta cagtggcgcc gcccgtccgc tggtgtccgt tcagctaatg
      961 gagcgcttac cggtcggggt ccagatcatc ttccgtcggc tgcattcctc gcaaaacctt
     1021 gttgtct
//
LOCUS       DASQSL010000447         1020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_193951, whole genome shotgun sequence.
ACCESSION   DASQSL010000447 DASQSL010000000
VERSION     DASQSL010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193951"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..255
                     /locus_tag="VE844_04515"
     CDS             133..255
                     /locus_tag="VE844_04515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00636.1"
                     /translation="MSSGKFYGGLRETLGLTKEEAGRLIAIHFHGAINRRPREA"
     gene            327..746
                     /locus_tag="VE844_04520"
     CDS             327..746
                     /locus_tag="VE844_04520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00637.1"
                     /translation="MDFDFPAPYDHEVPRRIGEARRQLSPEGVAVLERVIADESGDLE
                     AIIAAMESLPAPDRKVLVGISKVFAEAYDARIRESQGWVDLHRQLAGLIVRARELDPS
                     LGEGATLGEAIMVLKRHGEPLGISDEVLEIAVEMPEE"
BASE COUNT          190 a          282 c          318 g          230 t
ORIGIN      
        1 ttgtagattt ggtggcgctc ttctggcgcg aggtcctcca aggtttcacc aaccatgccc
       61 gagtaggact ccatcagggc gtccctgtcg tgctccaagc gcttcgaggt ctacgtcaac
      121 ggcgaagctg gcgtgagtag cggcaagttc tacggcgggc tccgtgagac tttggggctc
      181 accaaagagg aggcggggcg gcttatcgcc atccactttc acggggctat taaccgacgt
      241 ccgcgcgagg cgtaggtaaa ccgaccgggc cggggtatcc ttacccttgt gtaggagccc
      301 cggcccctaa gctgggagga ggatgaatgg acttcgattt ccccgcacct tacgaccacg
      361 aagtgccacg tcgcataggc gaggcccgcc gccagctctc acccgagggt gttgcagttc
      421 tggagcgcgt catagctgat gagagcgggg acctggaggc tattatcgct gcaatggagt
      481 cgctgcccgc ccccgacagg aaggtgttag tcggtatatc gaaggttttc gccgaggctt
      541 acgatgctcg aataagggag agccagggtt gggtggacct acaccgccag ctggcagggc
      601 tcattgttcg ggcgcgggag cttgacccgt ctctgggaga gggcgcaacc ttgggcgagg
      661 ctatcatggt actcaagcgc cacggtgagc cgcttggcat ctctgatgag gtacttgaga
      721 ttgccgtcga gatgccagag gaatagctgc cgccaactgg gccggggtcc ctagaggggc
      781 ttcggctctt ttttgtgtcc gcgtacttcc gagaacgctg ctttgaaact gtctgaaaag
      841 tctcggagga gtctgcgatg gtagccttat gagccaccca aacggtactt ttcggtccat
      901 cttggccttc gtatacctcc caaattcacg ctcgtagcat cgcccgcacc ccttttcaga
      961 cagtttcttt attggtcgta ggaaagcgcc cgtttgcagt gctttgaagc tattatcggt
//
LOCUS       DASQSL010000448         1144 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_140679, whole genome shotgun sequence.
ACCESSION   DASQSL010000448 DASQSL010000000
VERSION     DASQSL010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140679"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(81..515)
                     /locus_tag="VE844_04525"
     CDS             complement(81..515)
                     /locus_tag="VE844_04525"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00638.1"
                     /translation="MTDNHGYVLSPLPVAPVNATDMVLLPEGLKALKRVAKTVGLDLR
                     GAYLNLDAGFDSTHNRKCIFNAGMIPNIPENPRNRKRTKRGRKRLFNAAIHALRRRVD
                     RTFAWEDKFKRLLLRFEHLQQRHFGMKLMAYTLINVREFCGA"
     gene            complement(512..955)
                     /locus_tag="VE844_04530"
     CDS             complement(512..955)
                     /locus_tag="VE844_04530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00639.1"
                     /translation="MMRTTAKNPDITPIPVQLAGTEFNEFIFPHLSMPKRGPKCKIGY
                     HRLFNLILWVLYTGMPWKCVPILKGPTGRPEIHYTNVYRAFAKWADDGSLQQAFIASV
                     AHLSDEKKLDVRILHGDGTNTVAKKGETGLVTLVTNTRRARRSSP"
BASE COUNT          243 a          311 c          316 g          274 t
ORIGIN      
        1 tcctctccgt ttccgacccg attttaggcc cataggagag gctcatccat gctggttttc
       61 ttgtagaact ggttgcgagt ttaggcacca cagaactccc gcacattgat caaggtgtat
      121 gccatcaact tcatgccaaa atgtcgttgc tgcaggtgtt caaaccgcag gagcagccgc
      181 ttgaatttat cctcccacgc aaaggtccga tccacgcgcc tcctcaacgc atggatggcg
      241 gcattgaata atcgcttacg ccctcgcttg gtgcgcttgc ggttgcgggg attctctggg
      301 atgttgggga tcatgccggc attgaaaatg cacttgcgat tgtgcgtgga atcaaagccg
      361 gcgtcgagat tcagataggc tcctctcagg tccaaaccga ccgttttggc gaccctcttc
      421 aaggctttta gcccctccgg cagcaacacc atgtccgtcg cattgacggg agccaccggg
      481 agtggagaca acacatagcc atgattgtcg gtcatggcga tgaccttctc gcccttctgg
      541 tgtttgtaac cagagtaacc aatcccgtct cccccttttt ggccacggtg ttggtcccgt
      601 caccatggag tatgcgtaca tcgagcttct tctcgtccga gagatgggct acactggcga
      661 tgaacgcctg ctggagcgac ccatcatcgg cccatttggc aaacgctcgg tagacgttgg
      721 tgtagtgaat ttcaggcctg ccagtgggac ctttcagaat gggcacgcac ttccacggca
      781 tcccggtata gagcacccat aagatgaggt taaagaggcg atgatagcca attttgcact
      841 tcggaccccg cttgggcatc gagaggtgcg ggaagataaa ttcgttgaat tctgttccag
      901 ccaactgcac cggaatgggc gtgatgtcgg gatttttggc ggtggtacgc atcatgggcg
      961 ggcctcatgt gaagacggtt gattcgcacg ggagaagcct gatttctcca caggttacaa
     1021 gaggttaggc ccgtttgcaa aactcgcaat cagttcaatg gtagcgcggc ccgcgctata
     1081 ccaggcgcac gatcctcagc gtccagtatg ccaacggtat cggctgcccc tgaagatagg
     1141 gtta
//
LOCUS       DASQSL010000449         1072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_140684, whole genome shotgun sequence.
ACCESSION   DASQSL010000449 DASQSL010000000
VERSION     DASQSL010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140684"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..181
                     /locus_tag="VE844_04535"
     CDS             <1..181
                     /locus_tag="VE844_04535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC00640.1"
                     /translation="ERVQAVASQLQCDPSTVWRVCRRYEQTGMTGVVERTQRAGRPLR
                     ISPPAAGANCPTGLS"
     gene            186..1007
                     /locus_tag="VE844_04540"
     CDS             186..1007
                     /locus_tag="VE844_04540"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC00641.1"
                     /translation="MAKGLHITHWSSQDLAWQAITEKIVPAISAATIRRILHEVDLQP
                     HRTRYWKTARWDAEFKQRAEKVLWCYSNAYRLAQQGLWNVCVDEIPNYQVLERSPIRR
                     AIPGSIEQQEFEYTRHGTVNILVFLVVHTGYMEAIIVEKKDAAHYIQALERFRQRHRR
                     LKGVFLIQDGDPSHTAGDTQNYLADANTWWRPRFTPVHASWLNQAEILIHNFSHHYLK
                     PHSWHSRDAFIEHLRAACPEYNDRYAKPINGPGPITKCADGSKNMLTRLFHLRVN"
BASE COUNT          251 a          293 c          307 g          221 t
ORIGIN      
        1 cgaacgggtt caagcggtag cctcgcagtt gcaatgtgat ccgagcacgg tctggcgagt
       61 gtgccgccgt tatgagcaaa ccggtatgac cggtgtggta gaacggacgc agcgcgcagg
      121 ccggccactg cggatttccc cccctgcagc gggcgcaaat tgtccaactg gcctgtcttg
      181 agccggtggc gaaagggttg cacatcaccc attggtcgag ccaagatctg gcgtggcaag
      241 cgatcaccga gaagattgtg cctgctatca gtgcggcgac gattcgccgg attctgcatg
      301 aggtggattt gcaaccgcat cgcacgcgct attggaaaac ggcgcgctgg gatgccgagt
      361 tcaaacaacg ggccgagaaa gtgctgtggt gctacagcaa tgcctatcgc ttggcccagc
      421 aggggctgtg gaatgtctgc gttgatgaga tccccaatta ccaagtcttg gaacgctctc
      481 cgatccgccg tgcgattccc ggttcgatcg agcagcaaga gtttgaatac acacgccatg
      541 ggaccgtcaa catcctggta ttcttggtcg ttcacacggg ctacatggag gcgataatcg
      601 tggagaaaaa agacgccgcg cattatattc aggcgctgga acgtttccgc cagcgacacc
      661 gccgtttgaa aggcgtattt ctgattcagg atggcgatcc cagtcacact gcaggcgata
      721 ctcagaacta cctcgccgac gccaacacct ggtggcgtcc gcgctttacc ccggttcatg
      781 catcgtggct caatcaagcg gagatcttga tccataactt cagccatcat tatctcaagc
      841 cccactcatg gcacagtcgg gacgcattca ttgagcacct cagggcggca tgccccgaat
      901 acaatgaccg gtatgccaag ccaattaatg gacctggacc aatcacaaaa tgcgccgatg
      961 gttcgaaaaa catgctcaca cgactttttc acttaagggt gaactaggcc tggcgaaaga
     1021 tagccgtgag tgcctatgat ggaggttcga ttccagtgag agacggagag ga
//
LOCUS       DASQSL010000450         1448 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_127085, whole genome shotgun sequence.
ACCESSION   DASQSL010000450 DASQSL010000000
VERSION     DASQSL010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1448
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127085"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..247
                     /locus_tag="VE844_04545"
     CDS             <1..247
                     /locus_tag="VE844_04545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00642.1"
                     /translation="LVVEGDPRLFNQYSVILVNPARHKHVKQAEAVAFMDWLTSPEGQ
                     AAIGNFTSEGQALFHPNARPTPPPSPSPRSRGGKGWE"
     gene            254..1342
                     /locus_tag="VE844_04550"
     CDS             254..1342
                     /locus_tag="VE844_04550"
                     /inference="COORDINATES: protein motif:HMM:NF024138.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HZC00643.1"
                     /translation="MDIHFDLRWYLGQAQSEEVEPQLFRLLQAIEQGGSIRIAAEHCA
                     VSYRYAWGLMQKWQRLLGGPLVILERGRGAKLTPLGEKLLWAKRRITARLTPQFESLA
                     SELGVELRAALMREPQPPLRIYASHGLAIPLLRDRLNAQAISSRVDLQFRGSLESLRL
                     LAASKCDLAGFHLPEGPLGLRLAPHYRRWLDPEAHVLIHVVQRRQGLMMAAGNPEGIE
                     SISDLAEKRVRFVNRQLSSGTRLIFDHLLEQAGIAVDQIQGYTTEEFTHLAIAAIVAS
                     GAADVGFGIEAAAHRFGLYFMPMVRENYWFALNREALNLPAVADLLRLLRSPEFHDPV
                     AALPGYDPRAAGTVISVEHWMNEGLSGR"
BASE COUNT          286 a          421 c          438 g          303 t
ORIGIN      
        1 cctagtggtc gaaggcgatc cccggctttt caatcaatac agcgtcatcc tggtcaatcc
       61 ggcaaggcat aagcatgtga aacaggccga ggccgtggcc ttcatggact ggttgacctc
      121 tcccgaagga caggcggcga tcgggaactt taccagtgag gggcaggcgc tgtttcatcc
      181 caatgcaagg ccaacccccc ctccctcacc ctcccctagg tcaaggggag ggaaggggtg
      241 ggagtgaaga aggatggaca tccactttga tctgcgctgg tatctcggcc aggcacagtc
      301 cgaggaggtc gagccccaac tcttccggct cctgcaagcc atcgagcaag gcgggtcgat
      361 acggatcgcc gcagagcact gcgctgtctc ttaccgctat gcctggggac tcatgcaaaa
      421 atggcagcgc ttactgggcg ggcctctggt gatcctcgag cggggccggg gggcgaagct
      481 caccccgctt ggggaaaaat tgctgtgggc caagcgccgg atcacggcga gattgacccc
      541 gcaatttgaa agtctggcct cggaactcgg cgtagagctg cgcgctgccc ttatgcgcga
      601 gcctcagcca ccgttacgga tctatgccag ccacggcctc gctatccccc tcctgcgcga
      661 tcgcctgaat gctcaggcga tctcctctcg agtcgacctg cagtttcgtg gcagcctcga
      721 aagtttgcgc ctgcttgcag cttcaaagtg cgatctcgcc ggcttccatc ttccagaagg
      781 gccgctgggt ttgcgtttgg cgccccacta ccggcgctgg ctcgatccag aagcacacgt
      841 gttgatccat gttgttcagc gtcggcaagg gttaatgatg gctgcgggta atcccgaggg
      901 gattgaatct atctcggacc tcgcagagaa gcgcgtgcgc ttcgtcaacc ggcaactgtc
      961 ctcgggaacc cgcttgatct tcgatcatct ccttgagcaa gccgggatag cagtagacca
     1021 gatccaaggc tataccacag aagaattcac ccatctggcg atagcggcca tcgtcgcaag
     1081 cggggcagca gatgtgggat ttgggattga ggcggcggcc catcggtttg ggctttattt
     1141 catgcctatg gtcagggaaa attattggtt tgccttgaac cgcgaggctt taaacctgcc
     1201 agcggtcgcc gaccttttaa ggctacttcg cagccccgaa ttccatgacc ctgtggctgc
     1261 actgccaggc tatgacccgc gtgcagccgg gacggtgata tcggtcgaac attggatgaa
     1321 tgagggcctt tcaggccgat gatcaagggg cgcgtgtgaa tcatcgagtt cgatccgggg
     1381 gcactatcgg cgctgcgcaa gggaccgaag gagtttgcat atgtactggc attcgtcgcc
     1441 accgtatc
//
LOCUS       DASQSL010000451         1183 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_193956, whole genome shotgun sequence.
ACCESSION   DASQSL010000451 DASQSL010000000
VERSION     DASQSL010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193956"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1183
                     /locus_tag="VE844_04555"
     rRNA            <1..>1183
                     /locus_tag="VE844_04555"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          293 a          293 c          377 g          220 t
ORIGIN      
        1 ttggtcgggc gcaagctcgg ccgaagcggt gcgctgaacc caggtgagag caagggcatg
       61 acccagcgtg gtagttcgag cgcgttttgg ctatacgcgt ccaagccggt agggggagtg
      121 gacaggtaaa tccgtccgct cattcaaccc cgagaagcga atgagagcgg catctgctgc
      181 aattcgagcg agccaggctg gcaagaaaag tgtctagcga gatcaaaggt gcccgtaccg
      241 caatccgaca caggtaggcg ggtagagaat accaaggcga tcgggagaac cctcgttaag
      301 gaactcggca aaattgcccc gtaacttcgg gagaaggggc gcctcgcgac ccacactctg
      361 tgagggtcga tcgaggccgc agtgaaatgg cccaggcgac tgtttagcaa aaacacaggt
      421 ccgtgctaaa gcgaaagctg acatatacgg gctgacgcct gcccagtgcc ggaaggttaa
      481 gaggaggggt gcaagctctg aatcgaagcc ccggtaaacg gcggcagtaa ctataactgt
      541 cctaaggtag cgaaattcct tgtcgggtaa gttccgaccc gcacgaatgg cgtaacgaac
      601 ttgggcgctg tctcaacgag agatccggtg aaattttagt acctgtgaag atgcaggtta
      661 cccgcgacgt gacggaaaga ccccatggag ctttactgca ccctgacatt ggattggggt
      721 tcgtcttgtg taggataggt gggaggctga gaagctgggg cgctagcctc ggtggagcca
      781 acgttgaaat accacccttg ttgaatttcg gttctaaccg cgacccgtaa tccgggcgcg
      841 aaacagtgtc aggcgggcag tttgactggg gcggtcgcct cctaaagagt aacggaggcg
      901 cccaaaggtt ccctcaggct gaatggaaac cagccgaaga gtgcaaaggc ataagggagc
      961 ttgactgcga gacctacaag tcgagcagag acgaaagtcg ggcttagtga tctggtacct
     1021 ccgagtggaa ggggtatcac tcaacggata aaagctaccc tggggataac aggcttatct
     1081 cccccaagag tccacatcga cggggaggtt tggcacctcg atgtcggctc atcgcatcct
     1141 ggggctgaag taggtcccaa gggttgggct gttcgcccat taa
//
LOCUS       DASQSL010000452         1863 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_17661, whole genome shotgun sequence.
ACCESSION   DASQSL010000452 DASQSL010000000
VERSION     DASQSL010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1863
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17661"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            155..1666
                     /gene="ctaD"
                     /locus_tag="VE844_04560"
     CDS             155..1666
                     /gene="ctaD"
                     /locus_tag="VE844_04560"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009575355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HZC00644.1"
                     /translation="MNEKLPLYLLFSGAMFLFGGAQAMAFRFELFQPGIQLMDPLNFN
                     QFITVHGLIMVFGAVMPAFAGLANWLILMMIGAPDMALPRMNNWGFWVLPFAALLLIL
                     SLFVPGAPEAGWTLYPPLSIVGSSGKVEMGGDLLIFSVHLLGLSSILGSINIIVTILN
                     MRAPGMTLMKLPLFCWAWLITAFMIITCLPVLAGGVTMLLMDRHFGTSFFNAAGGGDP
                     VLYQHIFWFFGHPEVYIIILPAFGIMSHIVPAFARKPIFGYGSMVYALVAIAFLSLIV
                     WAHHMYTVGMPLAGNLFFMYATILIAVPTGVKIFNWISTMWQGSLSFEAPMLCALAFI
                     MIFSLGGFTGLMLGMAPADYQYHDTYFVVSHFHYIMGISAIYAILGAIYFWLPKWCGR
                     MYDEKLAQIHIWVSVIAVNVTFFPQFFLGLAGMPRRIPDYALEFADFNMISSLGAWVF
                     GASQLIFYYNVFKTLRGGVKVPEPKAWEGATGLEWTLPSPAPYHSFMTPPVIH"
BASE COUNT          340 a          519 c          508 g          496 t
ORIGIN      
        1 aattcctcaa tgcgcttctg ctgctccaga atgagttgca acaaacgctg caccagcggc
       61 gtctggtcag aactcgggat ctcggggaac ttgagagaac ggctttccat ggaattaagt
      121 atagcaatct accctgactt gatcgctacc tgggattaat gagaagttac cactttacct
      181 gcttttcagc ggcgctatgt tcctgttcgg cggcgctcaa gcgatggcct tccggttcga
      241 gctgttccag ccaggaatac agctcatgga tccgctgaac tttaaccaat ttatcaccgt
      301 gcacggcctg atcatggtct tcggggcggt gatgccggcc tttgccgggc tcgctaactg
      361 gctgatactg atgatgatcg gtgcccccga tatggcgctg ccccgcatga acaactgggg
      421 tttttgggtg cttccctttg ctgctttatt gctgatattg agcctatttg tcccaggagc
      481 cccggaggcg ggctggaccc tttacccgcc cttatccatt gtcggcagct caggtaaggt
      541 cgagatgggc ggcgacctgc tgatcttctc ggtccattta ttgggcttat cctccatcct
      601 cgggtccatc aatatcattg tcaccatcct caatatgcgc gccccgggga tgacgctcat
      661 gaaactgccg ctgttttgct gggcttggtt gatcaccgcg ttcatgatca tcacctgctt
      721 gccggtgctg gccggcggcg tcaccatgct gctgatggac cggcatttcg gcaccagctt
      781 ctttaacgcg gcgggcgggg gcgatccggt attgtaccag cacatcttct ggttcttcgg
      841 ccatcccgag gtctatatca tcatcctgcc agccttcggg atcatgtcgc atattgtccc
      901 ggccttcgcc cgcaaaccga tctttgggta tggttccatg gtctatgccc tggtggcgat
      961 cgccttcctg tccttgatcg tatgggccca tcacatgtat acggtgggta tgccgcttgc
     1021 cggcaatctc ttcttcatgt atgcgacgat cctgatcgcc gtgcccacgg gggtcaagat
     1081 attcaactgg ataagcacta tgtggcaggg ctcgcttagc ttcgaagcac cgatgctttg
     1141 cgccctcgct ttcatcatga tctttagcct cggtggtttt accggactga tgctcggcat
     1201 ggcgcctgcg gactatcagt atcatgatac ttacttcgtg gtatcgcatt tccactatat
     1261 catggggatc agcgcgatct acgctatcct cggggccatc tatttctggc tgcccaagtg
     1321 gtgcgggcgc atgtatgacg aaaagctggc ccagatccat atctgggtct cggtgatcgc
     1381 cgtcaacgtc accttcttcc cgcagttttt cctcgggctt gccggtatgc cgcgccggat
     1441 ccccgattac gccctggaat ttgctgattt caatatgatc tcgtcgctcg gagcctgggt
     1501 gtttggcgct tcgcagctga tattttacta taacgtgttc aagaccctgc ggggcggcgt
     1561 aaaggtccct gagccgaagg cctgggaggg agccaccggt ctcgagtgga ccctgccttc
     1621 cccggctccg taccacagct ttatgacacc tccggtcatc cattaggggg actagggcaa
     1681 taaagcgtgg aatgagagac aaatgggagt agtaatgacc cgatccccca aacgattggt
     1741 gaggaacagg gtgttggcca taagcctcgg cgtgcttgcc ggggttatct acctcgcctt
     1801 tattctattg tatatgtcta gaggataagg agcctgtatg tcggaacagc ggttgattag
     1861 acg
//
LOCUS       DASQSL010000453         1566 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_72202, whole genome shotgun sequence.
ACCESSION   DASQSL010000453 DASQSL010000000
VERSION     DASQSL010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1566
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72202"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..816
                     /locus_tag="VE844_04565"
     CDS             <1..816
                     /locus_tag="VE844_04565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005963792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase C-terminal beta-propeller
                     domain-containing protein"
                     /protein_id="HZC00645.1"
                     /translation="QDFIDKLFIANTHDTILCFSSRGKLYWLKVYELPQAGRTARGRP
                     IVNLLPLEEAERITAILPIRTFSEDCHVLMATRQGTVKKCELTEFSRPRPSGIIAIDL
                     SAGDRLVGVALTTGSQEVMLFSTSGKAIRFNEQEVRAMGRSARGVRGIRLASGHHVIA
                     LIVVELASTILAVTENGYGKRTPVEDYPRQGRGGQGVIAIQTSSRNGKLIGAVSVRDD
                     DEVMLISDRGTLVRTPASDISVVGRNTQGVTLISLGKGEKLVGVERIVDYDDN"
     gene            879..>1566
                     /gene="pheA"
                     /locus_tag="VE844_04570"
     CDS             879..>1566
                     /gene="pheA"
                     /locus_tag="VE844_04570"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018954050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HZC00646.1"
                     /translation="MLSEEKLKALRAGVDRIDAQLLELISQRAELAKEIAEAKGSEAD
                     KGGCYRPEREAQILRWVIAKNPGPLSDEEMARLFREIMSACLALQQPLTIAFLGPEGT
                     FTHAAALKHFGHSVQAQALNTIDDVFREVEAGNCYYGVVPVENSIEGVVNHTLDMFVY
                     SSLKICGEIELRIHHYLLGKTHGWEGIERVYAHQQALAQCRRWLNNNLPHAVREPVTS
                     NAEAARRASLE"
BASE COUNT          362 a          404 c          463 g          337 t
ORIGIN      
        1 caggacttca ttgataagct ctttatcgcc aatacccacg acactatcct gtgcttttcc
       61 agccggggga agctgtattg gttaaaggtc tatgaacttc cccaggcggg tagaaccgca
      121 cggggcaggc cgatcgtgaa ccttctgcca ctcgaggaag ccgagcggat cacagcgatc
      181 ctgccgatcc ggaccttttc cgaggactgc catgtgctta tggctacccg tcaaggtacg
      241 gtcaaaaaat gtgagcttac agagttttct cgtccacgcc caagcggtat catcgccatc
      301 gatctatcgg caggggaccg attggtcggt gtggctttga cgacgggcag tcaagaggtc
      361 atgctgttta gcacctcagg caaggccatc cgctttaatg aacaggaggt gcgggcgatg
      421 gggcgcagcg ctcggggagt gcgcggcatc aggctcgcct ctggacatca cgtcattgcg
      481 cttatcgtcg tggagctggc gagcacgatc ttggcagtta ccgagaatgg ttatggaaag
      541 cgtacgccag tcgaggacta tccaaggcag ggtcggggtg gtcagggggt aatcgcgatc
      601 caaacgagca gccgcaatgg taagctcatc ggtgctgtct cggtccgcga cgatgacgag
      661 gtgatgctga tcagcgatcg gggtacactg gtacgcacgc cggcctctga tatctcggtc
      721 gttgggcgca atacccaagg agtaacgctg atctcattgg gaaaagggga aaagttggta
      781 ggcgtagaac ggatcgtcga ttatgacgat aactgacgta ccgcgcataa gctaaaatta
      841 atctaatccc aataagtaaa atctatcgac taacgcccat gctcagtgag gagaaactca
      901 aggccctacg cgctggtgtt gataggatag atgctcagtt gctcgaactt atcagtcaac
      961 gtgctgagct agctaaggag atcgcagagg ctaaaggttc tgaggctgac aaaggcggtt
     1021 gctaccggcc cgaacgcgag gcgcagatcc tacgctgggt tattgcaaag aacccgggac
     1081 ccctttcgga tgaggagatg gcccgcctat ttcgggagat catgtcggcc tgcctggcct
     1141 tacagcaacc gctgaccatc gctttcctgg gccctgaagg aacctttacc catgcggcgg
     1201 cgctcaagca tttcggtcat tccgtccagg cccaggcgct caataccatc gatgatgtat
     1261 ttcgagaggt ggaagccggg aattgctatt acggcgtggt gcccgtggag aattccatcg
     1321 aaggggtggt gaaccacacc ttggatatgt ttgtatactc ctctcttaag atctgtggcg
     1381 agatcgaatt gcgcatccat cattatttgc ttggaaagac acatggatgg gaggggatag
     1441 agcgggtata tgcccaccag caggccctgg cacaatgccg ccgctggctt aacaacaatc
     1501 tgccacatgc agtacgggag ccggtcacaa gtaatgccga agcggcccgg cgtgcctccc
     1561 ttgaac
//
LOCUS       DASQSL010000454         1277 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_98841, whole genome shotgun sequence.
ACCESSION   DASQSL010000454 DASQSL010000000
VERSION     DASQSL010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1277
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98841"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..867
                     /locus_tag="VE844_04575"
     CDS             <1..867
                     /locus_tag="VE844_04575"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZC00647.1"
                     /translation="LSPVSAVVRAAHRITEGDLSKRLPVAHPKDEIGDLAATINGMLS
                     RLEKTLTRLQQTIDRQRRFVADASHELRTPLTSIHSYAQVLEEWALRDPQIGPESVAA
                     IKRESERMKGLVENLLELARGDEGMKLHLKDNNLTEVLQEAAESARAAVNGKVLIECP
                     SPKQRVQGVSAVFDRERLRQALSILLDNAVKYTPQGGRVSMRIVQEDASVGVEVSDTG
                     IGIPEEQIPHVFERFYRAEEARSTEGLGLGLSIARQIAEDHGGSIEARSKPREGSTFI
                     IRIPRGIPRSKG"
BASE COUNT          302 a          356 c          386 g          233 t
ORIGIN      
        1 ctctctcccg tgagcgcggt cgtgagggcc gcccaccgca tcacggaagg ggacctctcc
       61 aagaggctgc cggtcgctca ccccaaagac gaaatcggag atctcgccgc caccattaac
      121 ggtatgctct ctcgcctcga aaaaaccttg actcgcctcc agcaaacgat cgaccgacag
      181 cgccgcttcg tcgccgacgc cagccacgaa ttgcgtactc cgcttacctc catacacagc
      241 tatgcgcagg tgctggaaga gtgggcatta agagacccac agatcggacc ggagagcgta
      301 gcagcgataa aacgagagtc tgagcgcatg aagggactgg tagagaacct gctcgaactc
      361 gcccgcggcg acgaagggat gaaactacac ctcaaagaca acaacctcac cgaagtcctc
      421 caagaagccg cggagtcggc gcgtgcagct gtgaacggca aggtgcttat cgagtgcccg
      481 agtcctaagc agagggtaca gggggtaagt gcagtctttg acagagagcg tctgcggcag
      541 gcgctctcga tcctcctgga caacgcggtg aagtacaccc cacaaggggg gcgggtgagc
      601 atgaggattg tgcaagagga cgctagcgta ggggtagagg tttccgacac cggaatcggg
      661 atacccgagg agcaaatccc acacgtcttc gagcgtttct accgtgcgga agaagcccga
      721 tcgaccgagg gcttgggatt ggggctgtcg atagctcggc agatcgccga ggatcacggg
      781 ggtagcatag aggcgcggag caagcctagg gaaggatcga ctttcatcat acgcataccg
      841 cgaggcatac cacgctccaa ggggtgagct ttggtccctt caccacaatt acttccgaga
      901 acgtagcgcg ttgtccctgg cgaagcctcg cgaagctcag gcttggccta cggggggccc
      961 cctcatacgt gcttgaggtc ttattgggcg atgcggctga agcggcgata acccttacgg
     1021 tagtggaccg gggctatacg aacttcgcag agtttcccct ctgaaactgt ctgaaaagta
     1081 gctggggcaa ggtttcgact gcaaatccat tggtccgtaa cgacgaggat gatgctcgtg
     1141 cacccgtttt gtcgacccgt ggagccttgg ttcgaaaccc atcgagactt ttcagacagt
     1201 ttcgtagaga ctgtctgaaa attcgctata gcctccaaac tggagtctgt tagatcggca
     1261 gaagggacca agaaggc
//
LOCUS       DASQSL010000455         1194 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_166602, whole genome shotgun sequence.
ACCESSION   DASQSL010000455 DASQSL010000000
VERSION     DASQSL010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1194
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166602"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..437)
                     /locus_tag="VE844_04580"
                     /pseudo
     CDS             complement(1..437)
                     /locus_tag="VE844_04580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018740331.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            complement(587..>1194)
                     /locus_tag="VE844_04585"
     CDS             complement(587..>1194)
                     /locus_tag="VE844_04585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020460966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC00648.1"
                     /translation="VGLYLAPPAAAAVLCVDEKSGVQALDRTQPLLPMTFDKTEKRTH
                     DYVRHGTVNLFGALDVATGEVTGECYPRRGSEEFLAFMKTVAAKYVDRELHVVVDNLG
                     THFTAEVRDWLVDNPNITLHRTPVGASWMNQIEIWFGLITRQAIRRGTFSSVKQLVTT
                     IKNYIANWNADCKPFAWTADADTILAKVRWIESEVHKLTGH"
BASE COUNT          255 a          362 c          332 g          245 t
ORIGIN      
        1 gccgcagccg caggtggagc caggtacagg cccacgatgt cagcgacctt ctcggcaaaa
       61 tgggggtccc tcgaaagttt aaaggtgtcc tgtcgatgcg gcttgaggcg atgttcgcgc
      121 cataggtcgg ccacaaacac atgtgacacc tcgatgcctt cgtgtcgttt cagatacttc
      181 gccatctccc ggctcgacca ctgtgacaaa ccagtgtgct ccggtgggct cgttctgctc
      241 aaggcaagga ttcgagctcg aacccgttcg tcgtgcgctc tcggcttgcc cggatgtggt
      301 atgccgcgca agccctcgat acccgacgcc gcataccgca caggccataa ccgggcggtc
      361 ttatctgcga caccagccca gtcggcgatc tggaccgccg aatggccttc gtcccaccac
      421 agcaccagcc gagcccgcaa agcaagcaca gcattcaccg accgatctcg agtcagacag
      481 ctcaattcat cgcgctgatc agcagtcaat acaccacgtg gagcaggcat gagctgaata
      541 atctcacgca tcagtgatca acagactgcg acacgcttac gccacactag tgtcccgtaa
      601 gcttgtgaac ttccgattca atccagcgga ctttggcaag gattgtgtcg gcatcggcag
      661 tccaagcgaa aggtttacag tcagcattcc agttggcgat gtagttcttg attgtggtga
      721 cgagctgttt gactgagctg aaggttcccc ggcggatcgc ttggcgggtg atcagcccga
      781 accagatctc aatttggttc atccaggagg ctccgaccgg agtgcggtgc agggtgatgt
      841 tcggattgtc gacaagccaa tcccgcacct cagcggtgaa gtgcgtgcca aggttgtcca
      901 ccacgacatg aagttcgcgg tcgacgtact tggcagcgac cgtcttcatg aacgcaagaa
      961 actcctccga accgcgtcgg ggatagcatt caccagtgac ttctccagtc gcgacgtcca
     1021 acgcaccgaa caggtttact gtgccatgcc tgacgtagtc gtgagtccgt ttctctgttt
     1081 tgtcgaatgt catgggaagc agcggctgag tacggtccag tgcctgcacc ccggacttct
     1141 catcgacaca cagcaccgcc gcagccgcag gtggagccag gtacaggccc acga
//
LOCUS       DASQSL010000456         1179 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_98872, whole genome shotgun sequence.
ACCESSION   DASQSL010000456 DASQSL010000000
VERSION     DASQSL010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98872"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            406..>1179
                     /locus_tag="VE844_04590"
     CDS             406..>1179
                     /locus_tag="VE844_04590"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00649.1"
                     /translation="MAIMLTNTICWARFERAGLGRYSQGALSWMFRHAKLPWEKLFQM
                     SVAVILRRQGIKGGILVVDDSDKARSKTTRTIAHVHKLHDKASGGFIMGQNLVFLLLV
                     SEMITVPVGFAFYEPDPVQTRWAKQDRALKKQGVAKRQRPPKPPRHPAYPTKLELGLR
                     LLAQFKQYHPTITVKCVLADALYGSAAFVDTASAIFGGVQVISQLRSNQKVRSRNRTL
                     SVTQYFAHTLGVAQRYRIRGGEPVTMCVSSARLYVDAQGK"
BASE COUNT          223 a          336 c          348 g          272 t
ORIGIN      
        1 ttgaattggt catcaggaat cgttcggtca aagatgacca gttgccagac tatcccatca
       61 aggcatttgc cggacgcatt atgggtcgtt attctcgatt ctcaagtttt tagtgcttga
      121 cagatggcgt gaagcagggt agcggagtca gcccgtcaga ctctggttca agcgcctgcc
      181 tgagccttca tcatcccacg cactggcccg ctaccggcaa ttattttagg ctattggccg
      241 tcttttgtat cgttcgccat cgccccggag gttgccattt ttatcagcca gccgctaccg
      301 tttgtccgtg cctttgtaga ggacatcaat gccgccattc aggagcacaa cccgttatca
      361 ctgggcctgt cggccatcca gcgggggtgg ctgagttttt gcctgatggc gattatgctg
      421 accaacacga tctgctgggc gcggtttgag cgcgcgggcc tcgggcgcta ctcgcagggg
      481 gcgttgtcgt ggatgtttcg ccacgccaaa ctgccttggg agaagctgtt tcagatgagt
      541 gtggcggtga ttctgcgccg ccagggtatc aagggaggca ttttagtggt ggatgacagc
      601 gacaaggccc gctccaagac cacccgcacg atagcccacg tgcataagct acacgacaaa
      661 gccagcggtg gctttatcat gggccagaat ctggtgtttt tgctgctggt cagcgagatg
      721 atcacggtgc cggtcgggtt tgccttctat gagccggacc cggtgcagac ccgttgggcc
      781 aagcaagacc gggcgttaaa gaagcaaggc gtggccaaac gccagcgccc acctaagccg
      841 ccgcgccatc cggcctaccc gaccaagctt gagctgggct tgcgcttgct ggcgcagttc
      901 aagcagtatc atcccacgat cacggtcaaa tgtgtgttgg ccgatgcgct gtatggcagc
      961 gccgcctttg tggataccgc ctctgctatc tttggcggcg tacaggtcat tagccagttg
     1021 cgcagcaacc aaaaggtgcg ctctcgcaat cgcaccctct cggttacgca gtactttgcc
     1081 cacaccctcg gagtggctca acggtatcgc attcgtgggg gggagcccgt caccatgtgt
     1141 gtcagcagtg cccgcctgta tgtcgatgcc cagggcaag
//
LOCUS       DASQSL010000457         1054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_44784, whole genome shotgun sequence.
ACCESSION   DASQSL010000457 DASQSL010000000
VERSION     DASQSL010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44784"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1020)
                     /locus_tag="VE844_04595"
     CDS             complement(<1..1020)
                     /locus_tag="VE844_04595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008954583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HZC00650.1"
                     /translation="MKYENLLDAIGDTPIVRLNKLTRHLQCSLYAKLEFMNPGGSVKD
                     RIAKYMALGAEKCGAIAAGGTFIECTSGNTGMGLALFACARGYKTVFTVNDKQSREKI
                     NMLKAMGAEVIVCPTALAPDHPHHYVQAARKLAREIPNSFLCNQYDNPDNALAHYETT
                     GPEIWRDTEGRITHFVCGMGTCGTITGTGKYLKEQNPKVRVIGVDPEGSLFYDCFHHG
                     KLIEPHVYKVEGIGEDFFPKVLNWDYVDDMVQMSDKESFVMARKLARTEGIFAGGSSG
                     AAVTGALRVAETSRPEDLMVVILPDGGRQYLGKLYNDDWMRESQFIEAEIRLTVADIL
                     RSKKIK"
BASE COUNT          213 a          306 c          289 g          246 t
ORIGIN      
        1 ttttattttc ttggaccgga ggatgtcagc cacggtgaga cggatctccg cctcaataaa
       61 ctggctctcc cgcatccagt cgtcgttgta gagcttgccc aagtattgcc ggccgccgtc
      121 gggcagaatc accaccatga gatcctcggg tcttgaggtc tccgccaccc gcagcgcacc
      181 tgtcaccgcc gcacccgagg agccgccggc gaagataccc tcggttcggg cgagctttct
      241 ggccatgaca aagctctcct tgtcactcat ctggaccatg tcatcgacat aatcccaatt
      301 caaaaccttg gggaagaaat cctcgccgat gccctcgacc ttatagacat ggggctcgat
      361 gagcttgccg tgatggaagc agtcgtagaa caacgagcct tcggggtcca cgccgatcac
      421 ccggaccttc gggttttgct ccttgagata cttaccggtg ccggtgatgg tgccgcaggt
      481 gcccatgcca cagacgaagt gggtgatcct accctcggta tcccgccaga tctcgggtcc
      541 tgtggtctca tagtgcgcca aggcattgtc aggattatcg tactggttgc agaggaagga
      601 attggggatc tcgcgggcaa gcttgcgcgc ggcctgcaca taatgatgcg gatgatcggg
      661 cgcaagtgcg gtcgggcaga caatgacctc agcccccatg gccttgagca tattgatctt
      721 ttcacgcgat tgtttgtcat taaccgtgaa taccgtcttg taacctcggg cacaagcaaa
      781 cagagctaag cccatcccgg tatttcccga ggtgcattcg atgaaggtcc cgcctgcggc
      841 gatagcgccg catttctcag ccccaagcgc catgtacttg gcgatccggt ccttgaccga
      901 tccgcctgga ttcatgaatt cgagctttgc gtagaggctg cattggagat gacgcgtcaa
      961 tttattcagg cgcacgatcg gcgtgtcgcc gatggcatcg agcagatttt catatttcat
     1021 agagatctcc cggcacttta cgtcgcttgg ttat
//
LOCUS       DASQSL010000458         2417 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_154744, whole genome shotgun sequence.
ACCESSION   DASQSL010000458 DASQSL010000000
VERSION     DASQSL010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2417
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154744"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            276..674
                     /locus_tag="VE844_04600"
     CDS             276..674
                     /locus_tag="VE844_04600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014706864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZC00651.1"
                     /translation="MKRPPPTRGLRHVALHVQKLEACERFYVDLLGMQIEWCPDPDNV
                     YLCSGRDNLALHRLPEGRTASGPQRLHHIGFILSNPEVVDAWHEFLSANGVAIKAPPR
                     THRDGARSFYCEDPDGTVVQLIYHPPIAHT"
     gene            678..1619
                     /gene="hemC"
                     /locus_tag="VE844_04605"
     CDS             678..1619
                     /gene="hemC"
                     /locus_tag="VE844_04605"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004408824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HZC00652.1"
                     /translation="MSAPALRIVTRKSPLALWQAELVRKRLQALYPTLAIDLIGVHTT
                     GDKILDAPLAKIGGKGLFIKELEQRLLEGSADLAVHSMKDVTIDLPAGLAIPVILERE
                     DPRDAFISERYGSLDSLPHGARVGTSSLRRQCQLKAHRPDLEIRDLRGNVGTRLRKLD
                     QGEFDAIILAAAGVKRLDLHARIKDYLAPEIMLPAIGQGALGIECRAADEPVLELIQP
                     LDHSDTHLCVVAERAVSRRLYGDCQVPIAGHAELIEGKLFLRALVGRIDGSEIVHGQI
                     SGPQANAEELGIALAEDLLSRGAKTLLEELVQDAKGE"
     gene            1603..>2417
                     /locus_tag="VE844_04610"
     CDS             1603..>2417
                     /locus_tag="VE844_04610"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF014641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006780 - uroporphyrinogen III biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006782 - protoporphyrinogen IX
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HZC00653.1"
                     /translation="MQKENSSTRALAGLGVLVTRPAHQAEDLCRLIEAEGGRPIRYPL
                     IEIQPPQDLSRITPIFDRLQEFQIAIFISTNAVQHGMRLVRDRGLSLNPLAVVAVGHS
                     TAASLKELGVADPIVPYEASSEGILALKLFQPENITGRRVLIFRGEGGRELLAERLCE
                     RGAEVEYAEVYRRVKPPADRDTLMAYWGDRGEEIQIVLITSAEGLNNLLQMMGEAHRD
                     KELLATPLLVMSERIAALAQGLGFNPVVAKDTSDRGLVEALKAWWVGENTTPTL"
BASE COUNT          523 a          694 c          698 g          502 t
ORIGIN      
        1 aataccatta gtatcaaaga aaatagttac ccgtttcata gacaaatatg atccgggtct
       61 tgttggcctg cgccttcctg ggacgcccgc tccctactca tgctgccccg gcccagttga
      121 ccctgcactt cgtatttgcg agagatcacc attacctagg tacttctatc tagggcggtg
      181 tagttactga tatagcacaa agcgcattgt aactacgtaa gccctaattt aaagtatatt
      241 gtgaatttta ccagctgata aacgtgaaga cagtcataaa acgtccccct cctacccgtg
      301 gcttgcgcca tgtggccctc cacgtccaaa aactggaggc gtgtgagcgc ttttatgtgg
      361 acctcttggg gatgcagatc gaatggtgtc ccgatccgga caatgtctat ctctgctccg
      421 gcagggataa tctcgccctg caccggctcc ccgagggccg caccgcaagc ggtccacaac
      481 gcctccatca catcgggttt atcctgagca acccggaagt ggtcgatgcc tggcacgaat
      541 tcctcagtgc gaacggtgtt gctatcaagg ccccgccccg cacccaccgc gatggggcac
      601 ggagcttcta ttgcgaagat ccggatggca cggtggtgca actgatctat caccccccga
      661 tcgcccacac ctgagccttg tcagcgcctg cccttcggat cgtcacccgt aaaagcccgc
      721 tggcgctctg gcaggcggag ttggtccgca agcgcttgca agcgctctat ccgaccctgg
      781 cgatagatct gatcggagtg cacaccaccg gtgacaagat cctcgatgcg ccgcttgcca
      841 agatcggcgg caaaggttta ttcatcaagg aactggaaca acgtctgctc gaaggttccg
      901 ccgatctcgc cgtgcattcg atgaaagatg tgaccataga cttgcccgcc ggccttgcca
      961 ttcccgtgat cctggaacgg gaagacccac gcgatgcctt catttctgag cgttacggat
     1021 ccttggacag tcttccgcac ggcgcccgag ttggcacctc gagtctgcgc cggcagtgcc
     1081 agcttaaagc acatcggccg gatctcgaga ttcgggatct tcggggcaac gtaggcacgc
     1141 ggctcagaaa gctcgatcaa ggggaattcg atgcaatcat cttggcggct gccggggtca
     1201 agcgcctcga tctgcacgcg cgcatcaagg attatctagc gcctgaaatc atgctgcctg
     1261 ccatcggcca aggcgctctc ggcatcgaat gccgggcggc cgatgaaccg gtacttgagc
     1321 ttatccaacc attggatcac agcgataccc acctctgtgt agtggccgag cgtgctgtca
     1381 gtcgacgact ttacggcgat tgccaggtac cgatcgccgg tcatgcagag ctgatcgagg
     1441 gtaagctttt cctgcgcgcc ttggttgggc ggatcgatgg cagcgagatc gtccacggcc
     1501 aaatcagtgg tccccaagcc aatgctgaag agttgggcat agcgctcgct gaagatctgc
     1561 tgtcgcgggg agcaaagacc ctattagaag aattggtgca ggatgcaaaa ggagaatagt
     1621 tcgacacggg cattagcagg cttaggtgtt ctggtcaccc gtccagccca tcaggcggag
     1681 gacttatgcc gcttgattga agcggaaggc ggacggccga tccgctaccc cctaattgag
     1741 atccagcctc ctcaagatct gagccggatc actccgatat tcgaccggct ccaggaattt
     1801 cagatagcga tcttcatcag taccaatgcg gtccaacacg ggatgcggtt agtgcgagat
     1861 cgcggcctct cgctcaaccc gcttgctgta gttgccgtgg gccacagcac cgcggcaagc
     1921 ctcaaggaat tgggtgtggc cgatccaatc gtcccctacg aagccagcag cgagggaata
     1981 ttggcgctca agctgtttca gccggagaac atcaccggcc gccgtgtgct tatctttcgg
     2041 ggcgagggtg gccgggaact attggcagag cgcttatgcg aacgcggcgc agaggtcgag
     2101 tatgcggagg tttaccggcg ggtaaagcct ccggccgata gggatacctt gatggcctat
     2161 tggggagatc gcggcgagga gatccagatc gtcctgatca ccagcgctga ggggttaaat
     2221 aacctgcttc agatgatggg ggaagcgcac cgggataagg agctattggc taccccgctc
     2281 ctggtgatga gcgaacgaat agcggcgtta gcccagggac tcggattcaa cccggtggtt
     2341 gccaaggata caagcgatcg gggactagtc gaggccctca aggcatggtg ggtgggggag
     2401 aacacaaccc ctaccct
//
LOCUS       DASQSL010000459         2159 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_154745, whole genome shotgun sequence.
ACCESSION   DASQSL010000459 DASQSL010000000
VERSION     DASQSL010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2159
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154745"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            250..573
                     /locus_tag="VE844_04615"
     CDS             250..573
                     /locus_tag="VE844_04615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00654.1"
                     /translation="MKLARVFILLVILIAPLLTRAEGRYQVIPLLDSSGGFGPEKVVI
                     IDTVAGHMWIWTESPANPVDPGGRYLIYQGKLRPGNTMGEIIYKQEWGSGPGRKSDKS
                     MKKRR"
     gene            603..2102
                     /locus_tag="VE844_04620"
     CDS             603..2102
                     /locus_tag="VE844_04620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018618917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HZC00655.1"
                     /translation="MSIIDQSPNTSVSQRGSVLTEEAEAGFHRELGILDATALVAGSM
                     IGSGIFIVSADIARTVQSPGWLLLVWLLSGAITVLGALSYGELAAMMPRAGGQYVYLR
                     EAYSPLWGFLYGWTLFLVIQTGTIAAVAVAFAKFLGVLVPWVSAQHIVFQLGGLAPLS
                     TQRAVAIAVIALLTWWNCRGLYQGKILQDLFTLAKIGALILLILLGLWVGVHSPAGGL
                     SVNLAHFWGDAPISPGFLMLVGGAMVGALFSSDAWNNITFTAGEVKRPQVTLPVSLLL
                     GTGLVTLLYVLANLAYLSLLPLWGLEQGATVVERGIQYATDDRVGTAAGQQIFGSAGA
                     VIMAVAIMVSTFGCLNGLILTGPRLYFAMARDRLFFKRAGTLNGAGVPARGLWLQMLW
                     ASLLTLSGSYSNLLDYVIFAALLFYVLTVAALFVLRNQRPDAERPYKALGYPWLPGIY
                     IVAASAIMLDLLFVKPTYTWPGLLIVLTGIPVYVFWRRRVVAVQPPPHR"
BASE COUNT          435 a          573 c          600 g          551 t
ORIGIN      
        1 tcagtgatat cgccagcaac agatcaggcg tagtaaaatt ccaagttact ttagaaaaca
       61 gcaggatgct caagagcgta ctgttcaata accccggaga taaaaaggcg atggcattgt
      121 agacaataaa gatgattaaa aataaaggta ggctagataa catagttgtc tttccatgag
      181 aagatgggtt agatgcccgg tcaatataat aagagcccta ttttatcaag agaaagtcca
      241 ggaggatcga tgaaactagc gcgggttttt atattattag taattcttat cgcacctctg
      301 ttgacacggg ctgaaggacg ctaccaagtc atacctttgc ttgatagtag tgggggattc
      361 ggtccagaaa aggtggtgat catcgacacc gtggcgggtc acatgtggat ttggacagaa
      421 agcccggcca atcccgtgga tcccggtgga cgttatctga tctatcaggg caagttgcgc
      481 cctgggaata ccatggggga gatcatttat aaacaggaat ggggcagtgg acccgggaga
      541 aaaagtgata aatctatgaa gaagcgccgc taacactttc ccagctgaaa cagtgagagc
      601 ctgtgagcat catcgatcaa tcccccaata cctctgtttc ccaacgagga tccgtactca
      661 ccgaggaagc ggaggcgggt tttcatcgtg agttggggat cttggatgcc acggccttag
      721 tggcgggctc gatgatcggt tcggggatct tcatcgtctc ggcggatatt gcccgcactg
      781 tccaatcccc gggctggttg ctgctggtct ggctgctgag tggcgctatc acggtgctgg
      841 gcgcgctttc ctatggcgag ctcgcagcca tgatgccgcg cgcgggcggg caatatgtat
      901 atctccgtga ggcctattct cccctttggg ggtttctcta tggctggacc ttgtttctgg
      961 tgatccaaac cggcacgatc gccgcggtag ctgtggcctt tgccaaattc ctcggggtgc
     1021 tggtaccctg ggtgtcggcc cagcacatcg tgtttcaatt aggcggccta gccccccttt
     1081 ccacccagcg cgcggtagcc atcgctgtga tcgccctgct tacctggtgg aattgtcgcg
     1141 ggctgtatca aggcaagatc ctccaagatc tatttaccct ggccaagatt ggggccttaa
     1201 tcctcttgat cctgctcggt ctttgggtag gtgtccactc tcctgcaggg ggattgtccg
     1261 tcaatctcgc ccatttttgg ggagatgcac ccataagccc aggcttttta atgctggtag
     1321 gcggggccat ggtcggggct ttgttctcct ccgatgcctg gaacaatatt accttcaccg
     1381 ccggtgaggt gaagcggcct caggtcacct tgccggtaag tctgctgctc ggtaccgggc
     1441 tggtaaccct gctctatgtg ctcgccaatc tcgcctatct cagcttattg cccctttggg
     1501 gtttggagca gggcgccacg gtggttgagc gagggatcca gtatgcgacc gatgaccggg
     1561 tagggaccgc tgccggccag cagatctttg gttcggcagg ggccgtgatc atggccgtag
     1621 cgatcatggt aagtaccttt ggttgcctca atggcctgat cctgacagga ccgcggcttt
     1681 actttgcgat ggcccgcgat cgcttatttt tcaaacgtgc gggcaccctc aatggtgccg
     1741 gtgtacccgc ccgggggctt tggctgcaaa tgctctgggc ctccctcctt accctctccg
     1801 gcagctacag caatctgtta gattatgtga tcttcgcagc gctcttgttt tatgtgctga
     1861 cggtcgccgc tctgtttgtc ttgcgaaacc aacgtcccga cgcagaacgc ccctataaag
     1921 ccctgggtta tccttggctc cccgggatct atattgtggc cgcttcggcg atcatgctgg
     1981 atctcttgtt cgtcaagccg acctatacgt ggccggggct actgattgtt ttaacgggta
     2041 tcccggttta tgttttctgg cgccgccgcg ttgtcgcagt acaaccacct cctcaccgat
     2101 gatggcttgc ccacttccct cgactctcaa cacgtaatac aaacataacc atcccgttc
//
LOCUS       DASQSL010000460         6333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_72262, whole genome shotgun sequence.
ACCESSION   DASQSL010000460 DASQSL010000000
VERSION     DASQSL010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 6333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6333
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72262"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(42..1184)
                     /locus_tag="VE844_04625"
     CDS             complement(42..1184)
                     /locus_tag="VE844_04625"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015132011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZC00656.1"
                     /translation="MNLYLYLKHFPLYREQLTGGPEKAVHGLASGLAACGDQVTVLCE
                     GSENSLILSEEGYSIRCFATDQSLPAFTVSKHLKHYIAHQMKQSLVILNGNFHPSVFA
                     ISRLLRKHQLPYIVAPHDPYHPSIFRKKAHLKWPYWYLIERRLLRQAKAVQVLDIRHG
                     DWLRRLKVSTPVIEIPNGFAPDEVPAEPSLRWSKEGVATVFYLGRLDSHHKGLDLLID
                     AMAQLPNMFAVRLVMQGPDWGDRGSLEARVAQLQLGNRVSFLCADYDRSAPEIIVNYD
                     IFCLPSRFDGFGLSALEAMLAGRVLLVSKFSGIAPHVQASGCGVVVRPEAPSIQQGLR
                     ELLQRRSKWKDMGMAGRRYALTHLQWKTLACRARGYYQNLAAVGMC"
     gene            complement(2490..3872)
                     /locus_tag="VE844_04630"
     CDS             complement(2490..3872)
                     /locus_tag="VE844_04630"
                     /inference="COORDINATES: protein motif:HMM:TIGR03025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0032508 - DNA duplex unwinding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exopolysaccharide biosynthesis polyprenyl
                     glycosylphosphotransferase"
                     /protein_id="HZC00657.1"
                     /translation="MARIGILLLTDMLALLAAGVVGYLLWARPVSQQSLELYTDLLPL
                     LWLFPLGYAGMGLYPGFGVGAAETLRRLSYCTSFVFLVLAAGSFALKLPHYYSRMTFA
                     IVWGTSLAFVPLWRFLVLSVACRWRWWGEPTVLIGDGPWVQWAIRSLGNALSLGYRPV
                     AVLMPDGHQQEHLVEGVPVLGDGEMVPYLAQRGVRVALVEVNEHSFNGSTLSRFQRYF
                     RHVVVVRETQDLPVERVKVCNLGGVLGIEFTNDLLHWRNRCMKRLLDLTLGGLIFVLT
                     LPVMALGGCLVKLLSRGPLLFCQVREGLGGYPIKVWKLRTMYRDAEQRLQSFLATNPQ
                     LRQEWEARFKLANDPRIIPVIGTLLRRLSVDELPQLWNVIKGEISLIGPRPFPEYHLS
                     KFPPEFRELRRQVRPGLTGLWQVMIRSDGGIDVQQLYDAYYIRNWSTWLDLWILFRTV
                     RAVLFRNGAR"
     gene            complement(4029..4847)
                     /locus_tag="VE844_04635"
     CDS             complement(4029..4847)
                     /locus_tag="VE844_04635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WecB/TagA/CpsF family glycosyltransferase"
                     /protein_id="HZC00658.1"
                     /translation="MSGRWTVGVAANQGLTTVIPQVNILGVGVSAIAMTMALQTIEGW
                     IEQCEPHYVCITGVHGVMESQRDASLRQIHNRAGLVTPDGMPLVWLSWVMGFPHVERV
                     YGPELLLATCQYGAPKGYRHFFYGGAPGVAERLVLRLQAHIPELQVAGIESPPFRPLT
                     PDEEQAEAARINATRPDIVWVGISTPKQERWMARHVGRLVAPVLVGVGAAFDFHAGVK
                     RQAPRWIQRSGLEWLFRLATEPRRLWRRYLINNPWFLWLILHQFLGRRMYTLES"
     gene            complement(4844..5830)
                     /locus_tag="VE844_04640"
     CDS             complement(4844..5830)
                     /locus_tag="VE844_04640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012464561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HZC00659.1"
                     /translation="MTDRCKVLVTGAGGFIGHHLVSYLKRQGYWVRSVDLHYPQFAST
                     DADEFRLLDLRRWENCLQATHGVDEVYALAADMGGMGFISANHAAILHNNALINVHTL
                     EAARTNGVRRYLYTSSACIYPEYRQMAAEVTPLKEEDAYPAQPQDAYGWEKLIAERLC
                     LYYRGEYGLETRIVRFHNIFGPYGTWQGGREKAPAALCRKVAVAKLTGNPQVEIWGDG
                     EQTRSFCYIDDCITGLYKLMRSDYPAPLNLGQDRLVSINQLVDIIAEIAGIRIVKKHI
                     PGPQGVRGRNSDNTRLRQVLGWEPEVCLEEGLARTYPWIEGQVEKTKLMEAV"
     gene            complement(6057..>6333)
                     /locus_tag="VE844_04645"
     CDS             complement(6057..>6333)
                     /locus_tag="VE844_04645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017197207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="capsular biosynthesis protein"
                     /protein_id="HZC00660.1"
                     /translation="ILIDAPPMIPVSDAMLLSTMVDGVVLLVGAQTPKQLVWGARMRL
                     SYARARILGAALNRANIGLDHYRYDYWTYAEHNGPTVRKEVRLEDKQ"
BASE COUNT         1424 a         1880 c         1752 g         1277 t
ORIGIN      
        1 ctgatagcaa ggccctggtt taatggtcgc tgggtcttcc atcagcacat tcctaccgcg
       61 gccaaattct gataatagcc gcgcgcgcga cacgccagcg ttttccactg gaggtgcgtg
      121 agggcataac gtcgtccggc catccccatg tccttccact tcgaccgacg ctggagcaat
      181 tctcgtaagc cctgctgaat ggacggggcc tccggccgca cgacgacgcc gcagccactc
      241 gcctgaacat gcggtgcgat cccggagaat ttggagacta gcagtaccct gccagctaac
      301 atggcttcca gagccgataa tccaaagcca tcgaatcgcg atggcaggca aaagatgtca
      361 tagttgacaa tgatttctgg tgcagaccgg tcatagtcag cacataggaa ggacacgcga
      421 ttacccagtt gaagctgtgc cactctggct tcaaggcttc ctctatcccc ccagtccggc
      481 ccttgcatga ccaaacggac ggcaaacata ttggggagtt gtgccatcgc atcgatcagt
      541 aaatctaagc ctttgtgatg ggagtcgagg cggcctagat agaacactgt ggcgactccc
      601 tccttgctcc agcgtaatga aggttcagca ggcacctcgt ctggggcaaa cccatttgga
      661 atttcgatga caggagtgct caccttcaag cggcgcaacc agtcaccatg ccgaatatct
      721 aagacctgca cagctttcgc ctgtcgaagt aggcgtcgtt cgattaaata ccaataaggc
      781 catttgagat gtgccttctt gcggaaaatc gacgggtggt atggatcatg cggggcgaca
      841 atgtatggga gctgatgctt gcgcagaagg cgcgagatcg caaatacgct gggatggaag
      901 ttgccattga gaatgacaag gctctgtttc atttggtgag caatatagtg ctttaggtgc
      961 ttggagacgg taaatgctgg aaggctctgg tccgtggcaa aacagcgaat actgtagcct
     1021 tcctcagaca atataaggct attctctgat ccctcgcaca acacggtcac ctgatcccca
     1081 catgctgcaa gtccagaggc caggccatgc acggccttct cagggccacc tgtcaattgt
     1141 tcgcgataga ggggaaaatg cttgagatat agatataaat tcatcgcttg tatcccgtgc
     1201 tccattccca acctttccct ggcgtaggag tgaccggatg gcggcccgag aattgctgat
     1261 ctcggcggtc tcgagcagcg ctggtcgcgg ctccacattg ctgctctcga tgaggtcaag
     1321 tagccgccca gtaaccctcc cgtctcgcac tggcacgctg tagtgttgga ggcctagcgt
     1381 ctggagaaat tcatggatct ttgggctcac cgcaagaccg atgaccggta ttccttcaac
     1441 caaagctaga atagctgcat gtaacctaga agccatcaca gttgtctgtt cttgcagaaa
     1501 accgcgtaac tctgctagtg ctgaagggag ataaaggcta gcctcaggta acgacaagcg
     1561 cgctagtaca cgccttgctg gaacgacatc ctcgcctacc ccggttgtga agatctggac
     1621 gtgtgcggcg ttgacgaagt tgtgccggtg catccaagta gctatcgtgt gcactaagac
     1681 atcttcatag tgctgttgat cagcgcacca gcggtgtggc aaatgcatga cattgacagc
     1741 taaccttgat acttgaggcc gagacatatg ggaggtgagg ccccccctga gtgacatagc
     1801 aaagtctcca aagatgggca caggttgccc ccagatcatt gccacgcgtc ttgccgtagc
     1861 ggcgtctcgg gtggcaatga cgctacagga ccgaataaac tgcgcgatca tgcgctcccc
     1921 gcgcgccgac caggggcctt ccgcgctgca gccaagacag aaaaccggca aatagagctt
     1981 cctggctgcc catccgaccg cagcgagcga ttgtgggaag tggagatgtt catccgatag
     2041 cagggcccca ccccctacaa gaaccgctct cgcctgtgct atctctgaca gaagccgcca
     2101 aattcgtaga tgctgacggg ctggcctcaa ccaaggtttc aggaaggcat atgcgctggt
     2161 gcgccaggca tgtatcgtgg ttcgtgctgt cgaccattgc tccgccgggg cagacggtgg
     2221 gcgagcggct tgcagatgct gccgaatagg cgcaagactc ccgaggccgt aagcattaac
     2281 gagccagccg gcgctctgaa agaaatcctt aaccccctcg aaaatggcct gatctcccag
     2341 gttcccggta tcccattcgc cgaaggccgc gattttgggg gcctctgccg ctgtcttatg
     2401 ctgtataatg ctcaatgcat gaaatccctt ccattgtgct acgctagcct ccggcaatgg
     2461 cggacgcaaa ggccccatag ctctgacctt caacgagcgc cattcctgaa tagtacagcc
     2521 cggacggtgc gaaagagaat ccataggtcg agccaagtcg accagttccg gatgtaataa
     2581 gcgtcgtaca actgctgcac atcgatgcca ccatcgctac ggatcattac ctgccaaagg
     2641 ccggtcaaac cggggcgtac ctgccggcgt agctctcgaa attctggcgg aaatttgctc
     2701 aggtgatatt caggaaaggg ccgtgggcca atcaggctaa tctccccctt tatgacgttc
     2761 cacagttgcg gtaactcatc gacgctgagc cgacgcagca acgtcccgat gacgggaata
     2821 atgcgcgggt cattagcaag cttgaagcgt gcttcccact cctgacgcaa ttgagggttc
     2881 gttgctaaga aggattggag acgctgttcg gcatcgcggt acatcgtgcg cagcttccac
     2941 actttgatgg gatatcctcc caggccttca cggacctgac agaagaggag aggtccgcgg
     3001 ctaaggagtt tgaccaggca gccgcccaaa gccattactg gcaatgtcag tacgaaaatg
     3061 aggcccccca atgtgagatc cagcaggcgc ttcatgcagc ggtttcgcca gtgtaggagg
     3121 tcattggtga actcaatgcc caggacacca cccaaattgc agaccttcac ccgttcgacg
     3181 ggcaggtctt gagtttcgcg gaccaccacg acatgccgga agtaacgttg gaaacggctc
     3241 agagtggagc cattgaagct gtgctcattc acctccacca gcgccacgcg cacaccgcgc
     3301 tgggcaaggt atggcaccat ctctccgtcg ccaagcacgg ggaccccctc cacaagatgc
     3361 tcctgctggt ggccatccgg cattagcacg gccaccggcc gatagcccag tgagagggca
     3421 ttgccgagag atcgaatggc ccactgcacc catgggccat ccccaatcaa caccgtcggt
     3481 tcaccccacc agcgccagcg acaggctacc gacagcacca gaaagcgcca gagtggcacg
     3541 aacgctaaac tcgtacccca gacaatggcg aaggtcatac gcgaatagta gtgcggtaac
     3601 ttgagggcaa agctaccggc tgccagtacc aggaacacga agctggtgca gtatgagagc
     3661 cgtcgtaagg tctcggccgc tccgacgcca aagcctggat agagtcccat gccagcatac
     3721 ccaaggggga agagccagag caacggcagt agatcggtgt ataactctag ggattgctgt
     3781 gacaccggcc gtgcccacag taggtacccc actacgcccg ccgccaagag ggccagcata
     3841 tcggtcaata gtagaatgcc gatacgcgcc acatgaagcc accatggaga cctaagcctt
     3901 tgccaatgta acgtcagaga aaggaggctg gcaaccgatg aactcgcggc gggctctcgg
     3961 tttttcagcg ttggaggttg ctgcacatgc cacataaccg caggttcacc tcgtgttgtt
     4021 agccgctatc aggattccag cgtgtacatc cgcctaccca agaactggtg caggatcagc
     4081 cataggaacc acgggttgtt gatgagatat cgacgccaca gccgccgcgg ctctgtggcc
     4141 agacggaaca accactcaag cccgctgcgc tgtatccagc gcggcgcctg ccgtttcacg
     4201 ccggcgtgga agtcgaatgc cgctccgacg ccgaccagca ccggcgcgac tagccggccc
     4261 acatgtcgag ccatccatcg ttcctgcttg ggggtactaa tcccgaccca tacgatgtcc
     4321 ggccgcgtcg cattgatgcg cgctgcctct gcctgttctt cgtcgggagt cagcggccga
     4381 aaaggagggg actcgatccc ggcgacttgc agctcgggaa tgtgtgcctg caagcgcagc
     4441 actagccgct cggcgacccc gggcgcaccg ccgtagaaga agtggcggta gcccttcggg
     4501 gcgccgtatt ggcacgtcgc caacagcagc tctgggccat acacccgctc tacatgggga
     4561 aatcccatga cccaactgag ccagaccagc ggcatgccgt cgggcgtgac caggccggcc
     4621 cggttatgaa tctgccgtaa gctagcgtcc cgttggcttt ccatgacgcc gtgcacgcca
     4681 gtgatgcaga cgtaatgggg ctcgcactgt tcgatccagc cctcgatggt ctgcaaggcc
     4741 atcgtcatgg cgatggcact tacgcccact cccaggatgt tcacctgcgg tattaccgtg
     4801 gttagcccct gattggccgc cacgccaacc gtccagcgcc cgctcatacc gcctccatca
     4861 gcttggtttt ctccacctga ccttcgatcc aggggtaggt gcgcgccagt ccctcctcga
     4921 ggcagacctc cggttcccag cctagcactt gccgcagacg ggtgttatcc gagttgcgtc
     4981 cccggacgcc ttgaggcccc gggatgtgtt tcttgacgat acggataccg gctatctccg
     5041 caattatatc gacgagttgg ttgatagaca ccagacgatc ctggcctagg ttcagagggg
     5101 caggatagtc agaccgcatc agcttgtaga ggccggtaat acaatcatcg atgtaacaaa
     5161 acgagcgggt ctgctcgcca tcgccccaga tctccacttg agggttgcca gtcagcttag
     5221 ccacggccac cttgcggcat aatgccgccg gcgccttctc gcgtccgccc tgccaggtcc
     5281 cgtaggggcc aaaaatgtta tggaagcgta caatgcgggt ttcaaggcca tactccccgc
     5341 ggtagtagag gcagagccgc tcagcgatca gtttctccca gccataggcg tcctgaggct
     5401 gggctggata ggcatcttct tccttgaggg gtgtgacctc ggccgccatc tgccggtatt
     5461 ccgggtaaat acaggccgac gaggtataca ggtaccgtcg cacgccgttg gtgcgtgcgg
     5521 cctctagggt gtgcacatta atcagcgcat tgttgtgcaa aatcgcggcg tgattggcgg
     5581 agatgaaccc catgccgccc atgtcagcgg ccagggcata aacctcatcg acgccatgtg
     5641 tggcctgcag gcaattttcc cagcgtcgaa gatccaacag cctaaattca tcggcatcgg
     5701 tagaggcaaa ctgcggataa tgcagatcca cgctccgtac ccaatagccc tgacgtttga
     5761 gatagctgac caagtggtga ccgataaatc ctccagcgcc cgtaaccagc accttacaac
     5821 ggtcagtcat agaacacccc tcaagcaggg agttgcattc cttaacgtgt tggactactg
     5881 taaataaata gggggtgcgg gggtataacc tgttatagac aggtggaccc ctggtggcac
     5941 acaccgggtg tcagaagcaa tcccgctacg gaccattctc ccaaatgccc ccgtagaggg
     6001 gtgccgacct ctgccccccg tgcaaacggt actatttata cacaagtcca ctaccgttat
     6061 tgtttgtctt ccaatctcac ctccttccgt actgtggggc cgttgtgttc tgcataagtc
     6121 caataatcgt acctgtaatg gtccaatccg atattggccc gattaagcgc cgcgccaaga
     6181 atgcgagccc gcgcatagct gagacgcatg cgagcccccc aaacgagctg tttgggggtc
     6241 tgtgcgccga ctaacagcac cactccatct accatcgtcg acaacaacat ggcatcactc
     6301 accgggatca tcgggggcgc atcgatcagg atg
//
LOCUS       DASQSL010000461         1358 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_166620, whole genome shotgun sequence.
ACCESSION   DASQSL010000461 DASQSL010000000
VERSION     DASQSL010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1358
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166620"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            797..1240
                     /locus_tag="VE844_04650"
     CDS             797..1240
                     /locus_tag="VE844_04650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003883330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HZC00661.1"
                     /translation="MSLAMTKQEREAFLADVHVGVISIAELGRGPLTVPVWYAYDPGG
                     ELRLVTARTSRKGQLLARSGRFSLCAQTETAPYKYVSVEGPIVAVEDADLERDLRPLA
                     RRYLGPQMGDQYVESTASEHSDNVLVRMRPERWLTVDFAKEYELS"
BASE COUNT          281 a          361 c          401 g          315 t
ORIGIN      
        1 cacttttggg ttctcgattg caccgtaggt ggccgaaagt ggctgacgtg ctgatcaagg
       61 ccttatcgaa cataatatac tatgtcgcga tttctccagg gaagtcttcg gctttaatcg
      121 gcggctcccc cttgagcacc gtgacttgtt tggcgtcagc atctctcaag actccacaac
      181 gtggacatgt tcggtcatct tgtcgggttc ggccctggcc atcacgacct tcctcacact
      241 cccgggggat cgcatgatga ttcccctgaa tctacgtaga tgagcggctt gagggtgatg
      301 ccaccatcag gctcataggg acacatagcg cctgggcaac gtactatctc gttgttattg
      361 ctggaaattt ataatgcgat tatcctgggg actcgcctcg taggacaggt caagagcgtg
      421 cgtttcttaa caccagagat tgccgtgatg cacgctgtcg ggggaactgt gatgagaggg
      481 aaaacaaatc cttcaccgga gcgagactcg atttagacat tcattgcgat caaacgcagc
      541 ggcgaatggg gcctcgcagc atttcggaat acgagagtca ggcccatggg ccgtaacgct
      601 gggggcactt tggtctggtt ggtatcgaat tggttatgga agctgtttcg tccaaggaga
      661 tactaacctt gtctttgtca cgtccttagc ttgccatcta acatttggtt gcacaacacg
      721 gttcgcttcg ctcgccgcct gtgaaccgtg gcgttgggtg gcttgtgttg cccgacgttt
      781 caggggagaa gaacctatgt cactcgcgat gacaaaacag gagcgcgaag ccttcctcgc
      841 cgatgtccac gtgggcgtca tcagcattgc cgagctggga cgaggtccgc tcactgtgcc
      901 ggtctggtat gcatacgatc ccggaggcga actgcggctg gtgacggctc ggacctcacg
      961 caaggggcag cttctcgcgc gttccggcag attcagcctc tgcgctcaaa cagaaacagc
     1021 gccatacaag tacgtcagtg tggagggccc catcgtcgcc gtcgaggacg cggatctgga
     1081 gcgggacctc cgcccccttg ctcgtcggta tctgggtcct cagatgggcg atcagtacgt
     1141 cgagagcaca gcatcagagc atagtgacaa cgtgcttgta cggatgcgcc ctgagcgatg
     1201 gctcaccgtc gacttcgcga aggaatacga actctcatga gcgtctgggc atagatggtc
     1261 tgtccagccg gcgcaaatgg gtatgctcga cgacagggtt tcagaaagct ggctgtttgc
     1321 gggtgcttga cgactcccag tcgtcgaata caaagggg
//
LOCUS       DASQSL010000462         1036 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_72263, whole genome shotgun sequence.
ACCESSION   DASQSL010000462 DASQSL010000000
VERSION     DASQSL010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72263"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1036)
                     /locus_tag="VE844_04655"
     CDS             complement(<1..>1036)
                     /locus_tag="VE844_04655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015250508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HZC00662.1"
                     /translation="VCKTNHTARMTQAELEHHPHWRGFGKEAQAHPPMRGWLAAPLIG
                     HDSKNLGLIQLSDKYQGEFDETDEAILVQLAKLAAVAIENARLLVKLQESEERFCEIA
                     EMSGEWIWEQDPSGHYTYSSAAVKDILGYAPEEILGKPYYELSIEEDREHRLAEIPHT
                     ADIKERFFRFVSRYRHKDGHEVFTESTGAPILDGQGKLIKWRGVDHDIAWQRAKQAAE
                     AANRAKSEFLANMSHEIRTPINGIIGMTELALDADPTPEQREYLTLVKDSADSLLRLI
                     NDILDFSKIEAGKLDLEPVDFKLRDSLEGMIKTLALRAHKQGLELACHIPPEVPDRLV
                     GDNGRLFQIIV"
BASE COUNT          180 a          308 c          310 g          238 t
ORIGIN      
        1 tgacgatgat ctggaacagg cgcccgttat cgccgaccaa ccggtccggc acctcaggcg
       61 gaatatggca ggccagctcc agcccctgct tatgggcccg cagggccagc gtcttgatca
      121 tgccctcgag gctatcccgc agcttaaaat caaccggctc gaggtcgagc ttgccggcct
      181 cgatcttgga gaagtcgaga atgtcgttga tcagtcgtag tagggaatcg gccgaatcct
      241 tgaccaaggt caggtactcg cgctgttcag gggtgggatc ggcgtcaagc gccaactcag
      301 tcatgccgat gataccgttg ataggggtgc ggatctcatg gctcatattg gccaggaact
      361 cactcttggc gcggtttgcg gcttcggcgg cctgtttggc cctctgccag gcgatgtcgt
      421 ggtccactcc ccgccacttg atcagcttgc cttgcccatc caggatcggt gcgccggtgg
      481 attcggtgaa gacctcgtgc ccgtccttgt ggcggtagcg actgacgaac cggaagaaac
      541 gctccttgat gtcggcggta tgggggattt cggccagccg atgttcccga tcttcttcga
      601 tcgagagttc atagtatggc ttgccgagga tctcctccgg cgcatagccc agtatgtctt
      661 tcaccgctgc actgctgtag gtgtagtgcc cggaaggatc ctgctcccag atccattcgc
      721 cgctcatttc agctatctcg caaaaccgtt cttcgctttc ctgcagtttg accaggagcc
      781 gcgcgttctc aatcgccacc gccgccagct tggcaagctg caccaggatc gcctcgtcgg
      841 tctcatcgaa ctcgccttgg tatttatccg agagttggat aagaccgaga tttttgctgt
      901 cgtgtccgat aaggggcgcg gccagccagc cgcgcattgg cggatgggcc tgggcctcct
      961 tgccgaaacc gcgccaatgc ggatgatgct cgagctcagc ctgggtcatg cgggcagtgt
     1021 gattggtctt gcagac
//
LOCUS       DASQSL010000463         1128 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_58445, whole genome shotgun sequence.
ACCESSION   DASQSL010000463 DASQSL010000000
VERSION     DASQSL010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58445"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            942..>1128
                     /locus_tag="VE844_04660"
     CDS             942..>1128
                     /locus_tag="VE844_04660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00663.1"
                     /translation="MNGQRQKIQNEQLALAFMTEGGGEARRAVHEGFEPSVASHDLES
                     PARDDGLMEQICARDNVS"
BASE COUNT          279 a          270 c          358 g          221 t
ORIGIN      
        1 aaggcatgcg gaatgtcggt cgtaaacctt tttgaaaata gtttagaaac agtctacaaa
       61 acgaagagga tcttatccgt cgtgcgggaa tagacgttct ctctggctgg ctcgatgatc
      121 agggtcgcat gacggataag attagttgta ctgagtcgta ctgagcgatg cttctggatg
      181 tcgcggtgga gagagtgtga tagaagatgg cacggttcgt gccattatgg ggattctatc
      241 tttgccttcc ccctaaagcc gaaaccgcac gagaagagaa cgccgccaca cggtgatcgc
      301 cgcatgatca tatgccaaac agctctgtac atcaactgtg ccgtccccct cgcaccggtt
      361 gcggttacgc ttcccattct gcatgccata gccctctgcc atgcacgaca aggctcgtgc
      421 gccacatagc tgtcgcgaag cgatttagta gtgtgccgag catgtttggc agcttggagg
      481 tgcaaatcct ctacacaacc tgatggcggt gaagtgttag cgaagcgcaa gggcgtcgtc
      541 gcgaggcggg gtctgaaggc agcgtggagc aaagccatga cctgacggac agaaatcggg
      601 tatgaggcag tccgggtcgg acgagcgatc tactactcgc aaagtccata gccatcaagg
      661 acccgcgact gtagacgcgg caggtgtgtg gtgaaggcgg ccaatcttac ctcgggaggt
      721 ctgcatcgtg tctggggcgg acagagggcc aagctggact gaggaagccg taaggcgacc
      781 ctattgcggt gcagaagtca gcagacggca tagtagatca ggcagtcggg gcggctagtg
      841 aggcactcca aggtcgaaag acggagccaa ctgataggcc caaccgggaa cgctgattga
      901 aggcctgaac gatagagagc ggcgagtaga acaggattct catgaacgga cagcggcaga
      961 aaatccagaa cgagcagtta gcactggcct tcatgaccga gggcgggggt gaagcccgac
     1021 gcgcggtaca tgaagggttc gaaccgtctg tggcgagtca tgaccttgaa agcccggcaa
     1081 gagatgacgg tttaatggaa cagatttgtg cgcgtgacaa tgtcagtg
//
LOCUS       DASQSL010000464         2739 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_98914, whole genome shotgun sequence.
ACCESSION   DASQSL010000464 DASQSL010000000
VERSION     DASQSL010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2739
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98914"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1585)
                     /locus_tag="VE844_04665"
     CDS             complement(<1..1585)
                     /locus_tag="VE844_04665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00664.1"
                     /translation="MARSEILAQVFEQPTSPVHRRFEVCRAYFLNRLTAPAIAHRFGL
                     HVGTVQAIVRDFAANPDLDQFFRSTQPGRKTSPKREALSERALELRRQGRSVGQIRVQ
                     LSAEGHPVSESYLAAILRSQGFLPLRRRGRPPRPGAPARDGSEIPAIADIRELSLEAG
                     RTLPTQAAGLFLFLPLLLDSHFSQAVQAAGYPGTQQLPALQAMLSLLAPKLLGKRRVS
                     HVSDLGTDEGAGLFAGLNVLPKTTYATAYSYQTERLMNERLVDELTRRVPLKEPPLCF
                     NLDFHAIPFRGQKADLENHWVPKSHRGQPAVMAFVAQEAERRVMCYATANVVRAEADT
                     LVVKFADHWHTLTGHYPSRLLFDSRATTYANLSELTRRGVGFITIRRRGSAMLRRIRA
                     LPARQWHPCQVTQAKGKRRSVRYVQETVTLEGYQGELRQIVFDGLGHESPTFVLTNDL
                     PERLTARQVIQTYARRNHVEHSLGEKITFFHLDCLASEVRLNVDFDLTLTVVAAMLYQ
                     RLAARLKGFAKSTPHTLFRK"
     gene            complement(1798..2220)
                     /gene="tnpA"
                     /locus_tag="VE844_04670"
     CDS             complement(1798..2220)
                     /gene="tnpA"
                     /locus_tag="VE844_04670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008933371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HZC00665.1"
                     /translation="MREWQSLAHVKWECKYHVVIVPKYRRKVLFGHVRKRLGNIFRQL
                     CRQKEIELVEGHALLDHVHMVLSIPPKLSVAMAVGYLKGKSAIQIHREALNVKQGFTG
                     KHFWSRGYCVSTVGLDEQMIRAYVKNQEDLDRQEDLFN"
     gene            2524..>2739
                     /locus_tag="VE844_04675"
     CDS             2524..>2739
                     /locus_tag="VE844_04675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HZC00666.1"
                     /translation="MITEYVEALGRGSDPSSPLFRPVRNTVNGKLDEAMTTDGVYWLV
                     RHYARKIGIGDIEGLGVHSLRATAATNA"
BASE COUNT          575 a          746 c          819 g          599 t
ORIGIN      
        1 acttgcggaa gagggtgtgg ggcgttgatt tggcaaagcc tttgaggcgg gcggccaagc
       61 gctgatagag catagcggcg accacggtga gggtcaggtc gaagtccacg tttaagcgca
      121 cttcgctggc caggcagtcg aggtggaaga aggtgatctt ttctcccagc gaatgttcta
      181 cgtggttgcg acgggcatag gtttgaatca cttggcgggc cgtgagccgt tcgggcaggt
      241 cattggtcag cacgaaggtt ggggactcgt gtcccaggcc gtcgaagacg atttgccgca
      301 actcgccttg gtatccctcc aaggtcacgg tctcttgtac atatctcacc gagcgacgtt
      361 ttcccttggc ctgggtaact tggcaagggt gccactgtcg agctggcaat gcccggatcc
      421 gcctgagcat agctgaccca cgacggcgga tggtgataaa tcccaccccg cggcgggtca
      481 gttcgctgag gttggcatag gtcgttgccc gcgagtcgaa caacaagcgg cttggatagt
      541 gcccggtgag ggtgtgccag tgatcagcga atttcacgac tagggtatcc gcctcggcac
      601 gcaccacgtt ggcggtggcg taacacatca cgcgccgctc ggcttcttgg gcgacaaagg
      661 ccatcacggc gggctgtccc cggtgacttt tgggtaccca gtggttctcc aggtccgcct
      721 tttggccgcg aaaggggatg gcgtggaaat cgagattgaa gcataagggg ggctccttaa
      781 gcggtacccg gcgggtcaat tcgtcgacca agcgctcgtt catgaggcgt tcggtttgat
      841 aggaataagc ggttgcgtag gtagtcttgg gcaagacgtt caacccagcg aataatcccg
      901 ccccttcatc ggtgcccaga tcgctgacat gactgacgcg ccgcttaccc aatagcttgg
      961 gagctaacaa cgagagcatc gcttggaggg ctgggagctg ctgggtgcca gggtacccgg
     1021 cggcctgaac cgcttgtgag aagtggctgt cgagtaacaa gggtaggaac agaaacaggc
     1081 cggcggcctg agtcgggaga gtacggccgg cttccaggga gagctcacgg atatcagcaa
     1141 tcgccggtat ttcagaacca tcacgcgcgg gtgctcccgg ccgagggggc cgacctcgcc
     1201 gccgcagcgg taaaaaccct tggcttcgca gaatggctgc caagtaggat tcagagacgg
     1261 ggtgtccttc cgcactgagt tggacgcgga tttgccccac gcttcggcct tggcgccgga
     1321 gttctagggc gcgctcgctg agtgcctccc gtttgggcga agtctttcgt ccgggctgcg
     1381 tggaccggaa gaactgatcg agatccgggt tggcagcaaa gtcccggacg atggcttgca
     1441 ccgtgcccac atgcaagccg aatcggtgcg caatggccgg agcggtgagt cggttaagga
     1501 agtaagcacg gcagacctcg aaacgtcggt gaacagggct ggtaggttgc tcaaaaacct
     1561 gtgccagtat ctcggagcga gccatgctca attgagtgta atatagagta ggtttaccgc
     1621 tacaatgcct ctttatggac agactactcc cttaggatag ggcggtgatc agccactatt
     1681 cggggtacgg gtgacggcaa agagctaatt accacttgcg tgtctgccta tgtgctattt
     1741 tagtcacgaa ccacccgcat agcgggtggc ttgaggaaag cccctaaaag gggctattta
     1801 gttaaacaag tcctcttggc gatcgaggtc ttcctgattc ttcacgtaag cacggatcat
     1861 ctgctcatct aaccccaccg tacttacgca gtaccctctc gaccagaaat gcttgcccgt
     1921 aaagccttgc ttcacgttca gcgcctctcg gtggatctgt atcgctgatt tccctttcag
     1981 ataccctacc gccatcgcca cactcaactt cggcggtatg ctcaatacca tgtgcacatg
     2041 gtccagcagc gcatggccct ccaccagttc aatctccttc tggcgacata gctgtcggaa
     2101 tatgttccct aatcgtttgc gcacatgccc aaacaatacc ttgcgtcggt acttcggcac
     2161 gatcactaca tgatacttac attcccattt cacatgggct aagctttgcc actctctcat
     2221 gacgattcct cctcgcccct cggggcttac ctcgggagga atcgtctctt tttatcgcag
     2281 gaacggcata gccttttcaa gtctcaccgg cagaaccggt ggtttaccga actgcctaat
     2341 tatgcaacgg tcagtaagtg gaggccttat tcagggcgag gaagtcgaat gcccctggca
     2401 tggcgcccgc ttccatatcg ccacgggcaa ggtcaccctc aacccggcca cgaaagacgt
     2461 taccacatac aaccttcgtc tgaatgggga agatatagag attgaggttt aaagattaag
     2521 ggggtgataa cggagtatgt tgaggcgctg ggccgcggaa gcgacccctc ctctcccctc
     2581 ttccggccgg tacgaaatac cgtcaacggg aaacttgatg aggcgatgac cacggacggg
     2641 gtgtattggc tggtgcggca ttacgcacgg aaaattggca ttggcgatat tgaaggtttg
     2701 ggtgttcatt ccctgcgggc tacagccgcg acgaatgca
//
LOCUS       DASQSL010000465         1051 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_72278, whole genome shotgun sequence.
ACCESSION   DASQSL010000465 DASQSL010000000
VERSION     DASQSL010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72278"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..409
                     /locus_tag="VE844_04680"
     CDS             <1..409
                     /locus_tag="VE844_04680"
                     /inference="COORDINATES: protein motif:HMM:NF024908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC00667.1"
                     /translation="MDIRERVIENLDHESMRKTAKRFRVSEYFVYRLKQRYREAGTLA
                     PKPHGGGHGPLVDEAGGEFIRGVLAEAPDLTLNELCERYEGRFACKVSKSSMDRALRR
                     LDLTRKKRPSTTPSRRRNVSNSNGLPTPRSSPR"
     gene            430..768
                     /locus_tag="VE844_04685"
     CDS             430..768
                     /locus_tag="VE844_04685"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00668.1"
                     /translation="MDEMGAAVNLTPLYGRSPTGERVYGAQPTGPGKRISTVGALGLG
                     GLTSAMCFEGTLTGEVFLQFLDEFLVPGLKPGQIVILDNAKAHKVEGVRERIEGAGAR
                     VLYLPPIRLI"
     gene            780..926
                     /locus_tag="VE844_04690"
     CDS             780..926
                     /locus_tag="VE844_04690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00669.1"
                     /translation="MAWSKVKQFLRKAQARTVEALYEAIAQALQTLSPNDAKGFFKHV
                     GFCI"
BASE COUNT          247 a          256 c          333 g          215 t
ORIGIN      
        1 gatggatata cgggaacggg tcatagagaa tctggaccac gaatcgatga ggaagacggc
       61 caagcggttt cgggtttcag aatactttgt ctaccggctc aagcagcgtt atagagaagc
      121 gggcacgctg gcgcccaagc cccatggagg agggcacggg ccgctggtag atgaggccgg
      181 tggggaattc atccgtggag tgctggccga ggcgccggat ttaacgctca atgagttatg
      241 tgagcggtat gaggggagat tcgcttgcaa ggtcagtaaa tcctcgatgg accgagcatt
      301 gcgacggttg gatttgactc gaaaaaaaag accctctacg accccaagca gaaggaggaa
      361 cgtatccaac agcaacggac tgcctacacc gaggagctcc ccacgctgaa ggcagagcag
      421 atcatcactg tggatgagat gggggcggcg gtgaatctga cgcctctcta tgggcgctcc
      481 cccaccgggg agcgggttta cggagctcaa cccaccgggc cggggaagcg catcagcacg
      541 gtcggtgcgt tagggctcgg tggcttaacg agcgcgatgt gctttgaggg caccctgacc
      601 ggggaggtat ttttgcagtt cctggacgag tttctggtgc cggggctcaa gcccggccag
      661 atcgtgattc tggataacgc caaggcccac aaggtggaag gggtgcgtga acggattgaa
      721 ggggcgggtg cgcgcgtgct ttatctgccc cctattcgcc tgatttgaat cccatcgaaa
      781 tggcctggtc caaggtgaag cagttcctgc gcaaggctca agcgcgcacc gtggaagcac
      841 tctacgaggc gattgctcag gccttacaaa ctctttctcc gaacgatgct aagggcttct
      901 tcaagcatgt cggattttgt atatgatccg tatgggaact gctatagtta aaatcgcgcc
      961 tgcacccgct tgaaaaacaa gaacttggtt gaagttactt agaagaagaa ggcgcggtta
     1021 atggttcgat taccattgct caatgaccaa g
//
LOCUS       DASQSL010000466         1865 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_140851, whole genome shotgun sequence.
ACCESSION   DASQSL010000466 DASQSL010000000
VERSION     DASQSL010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1865)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1865)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1865
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140851"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(440..748)
                     /locus_tag="VE844_04695"
     CDS             complement(440..748)
                     /locus_tag="VE844_04695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019550282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GYD domain-containing protein"
                     /protein_id="HZC00670.1"
                     /translation="MPTYILLSTLTPEGRQTLHTNPDRLEEVNKEIADFGCKVVAQYG
                     VLGLYDFVSIIEAPDNETVTHLSIDLGSRGTVNIMTLPAIPTAQLREKLKGPKQMGRS
                     "
     gene            1277..1435
                     /locus_tag="VE844_04700"
     CDS             1277..1435
                     /locus_tag="VE844_04700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011787205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YqaE/Pmp3 family membrane protein"
                     /protein_id="HZC00671.1"
                     /translation="MDLIRIIAAVLLPPLGVFLQVGLGKHFWLNILLTLLGYIPGIVH
                     AVWVIAKK"
     gene            complement(1543..1647)
                     /locus_tag="VE844_04705"
                     /pseudo
     CDS             complement(1543..1647)
                     /locus_tag="VE844_04705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611868.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(1678..>1865)
                     /locus_tag="VE844_04710"
     CDS             complement(1678..>1865)
                     /locus_tag="VE844_04710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00672.1"
                     /translation="VPWNLPPLVNGCPRYRNHSGSSKLYGNEAGPFHYYTSKSVDTIR
                     GHYIPWQRLLAEVAIPT"
BASE COUNT          383 a          514 c          561 g          407 t
ORIGIN      
        1 ggacaaataa acgcatgcgt ctatcgggga aatcccgaaa aatgtccgga aatgtaattg
       61 ttcagggggt ggtgcgctca ggtgacagaa ggtggcgggc cttctgctct cacgggccag
      121 tcgctggatc gccccggcta agtgtaattt tccgttccac cccccccgtg cacctggtat
      181 actcatgccg ctctgaccat gccatgccgc ctctttgagg acctgaccac ctgttggggc
      241 acacgctaaa tcagtccaca cgagattggg acactctggt tcggctacag acccggccct
      301 ggtggggccg ccacaatccg cgtgtaccaa tgttctgtgg ttcgatttag cgggagggac
      361 gctgcgatga gacgccatag gtgattctca gtgtggcagt gacaggcccc agacatcagc
      421 tctcgccgcc ccccgccgat caggatcggc ccatctgttt tggtcctttg agtttctcgc
      481 gcagctgcgc cgtcgggatc gcgggcaggg tcatgatgtt gaccgtcccc cgcgagccca
      541 ggtcaatcga gagatgcgtg accgtctcgt tgtctggggc ttcgataatg ctgacaaaat
      601 catagaggcc taacacgcca tactgggcga cgaccttaca gccgaagtca gcgatctctt
      661 tgttcacctc ttccaagcga tcggggttgg tgtgcagggt ttgccgtccc tcgggagtca
      721 aggtgctcaa cagaatatat gtcggcatgg tcccctcctg gcgcagatca ccggtggccg
      781 gtacgtggga gcgcgcgcgg cgcctcagac ggtctggagc ggaatatagg cgtcgcatcg
      841 gatcccgtca aggaatgaaa gggtcatcca agcaattggg gtctcatctc ctgacggtat
      901 gcgggggcag agcaaagctt catgccgcac tgatgccaaa tccgctctga ggagatggtc
      961 aggagagccg tacaattttg ggatgctgct cgagctcgcg aaagggttgt aatgcaatgg
     1021 acccgcctct ttccagtacg gctttgatga gccagcatgg ttgcggcatc gtgggccacc
     1081 atgcaccaca aggaggcgag tcctacggca cagaaaatac gcgtactcgg gatcgacatc
     1141 gccaagctgg tgtttcacgt cgtcggtatg gatgacaccg gacatgtagt actccggagt
     1201 gggatagatt catggacctg catgcgatat catcacgtgt gggactatcg tggcgcagcc
     1261 aacggaggat ctcggcatgg atctgatccg catcatcgct gcggttttgc tgccgccgct
     1321 tggggtcttc ttgcaggtcg gtctgggcaa gcatttttgg ttgaatattc ttttgacact
     1381 gttggggtat atccccggaa ttgtgcatgc ggtgtgggtg attgcgaaga aataagctgc
     1441 ccgagcagat gaagacgggc cacgttccac acccgccatc aaccgctgtc acacccgaca
     1501 tggcacggcg ctgcgcgtgc ggtcctaggg cgtgtttgca aatcagagcc acagcacaat
     1561 cgccgcgatg aggagcatgg catggtagtt ggcagcccgc ttttcatacc gggtcgcaat
     1621 ccggcgacgc tgcttgaggc gattgatcgg tagtgcccca aaaaactctt cccgccgcta
     1681 agtagggatc gccacctcgg ccaacagccg ttgccacggt atgtagtgtc cgcgaatcgt
     1741 gtccacggat ttggacgtgt aataatgaaa tggacccgcc tcattcccgt acagcttcga
     1801 tgagccagaa tggttgcgat atcgtgggca accattgacc agaggaggca agttccatgg
     1861 cacag
//
LOCUS       DASQSL010000467         1374 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_166631, whole genome shotgun sequence.
ACCESSION   DASQSL010000467 DASQSL010000000
VERSION     DASQSL010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1374
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166631"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(251..493)
                     /locus_tag="VE844_04715"
     CDS             complement(251..493)
                     /locus_tag="VE844_04715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00673.1"
                     /translation="MSNCFKSALMRFGLWCAGLRGSTRIRVWLLGYPAMLKDLARDLN
                     PDRPGRYEPRVVKRRPKPFPRMQQPRQVLRQQLVRA"
     gene            complement(477..>1374)
                     /locus_tag="VE844_04720"
     CDS             complement(477..>1374)
                     /locus_tag="VE844_04720"
                     /inference="COORDINATES: protein motif:HMM:NF033592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC00674.1"
                     /translation="TFPECLLPWLPFPWRDCRGFLSIVRVIYGQLLSSRVSDEHLWRG
                     RQVHVVDGTGIALPDTEANQDAYPQPSEQKPGCGFPVLRLVAFMSLATGAVSRYRTGN
                     LHDHEQRLFQELRTHLKGGEVVLGDRNFGTFANLVLLKRQGAEGVFRRHQARGVGAKT
                     LKPLGQDDHLVRWSFIPRKQHPVWLDASVRLPSTCVVREVSFQVTQPGFRTKSVTLVT
                     TLLDAKSYPAWALAELYFRRWRMELWLRDIKITMDMDRLRTQTPARVRAELAMFLVGY
                     NLIRTVMFDAAKVGEVRLEQLF"
BASE COUNT          324 a          397 c          373 g          280 t
ORIGIN      
        1 gattacatgg ttttatgagg ctggaattcc aaccagagaa taatattagt cgcactgtca
       61 agctccatac agatcttgac taatatatta cggtataggt gaaggcatat tcagatcaaa
      121 gtcagatcag aaacagagca taaatgatca ctttcgccaa aattcacgat gactatcttg
      181 gcgcttagca tcgacctctt gatgtgaaag aacacctgca gggcttcctt tcatctcaac
      241 gcagagctca tcaggctctc accagctgct gccgcaacac ctgtcgaggc tgctgcatgc
      301 gggggaatgg tttgggacgg cgtttgacca cccggggctc atatcgaccc gggcgatccg
      361 gattgagatc gcgggctaga tccttcaaca tcgccgggta tcccaacagc cacaccctga
      421 tccgggtgct gcccctgagc cccgcgcacc acagcccgaa gcgcatcagc gccgatttaa
      481 aacaattgct caagccggac ctcgcccact ttggcggcat cgaacatgac ggtccgaatc
      541 agattgtagc ccaccaggaa catggccaac tccgcccgca cccgggcagg cgtctgggtg
      601 cgaagcctgt ccatgtccat ggtgatcttg atgtcccgca gccacaattc catccgccac
      661 cttctgaagt aaagctcagc cagtgcccaa gcgggatagc tcttggcatc caacagtgtg
      721 gttacaagcg tcaccgattt cgtgcggaaa ccaggctgcg tcacttgaaa gctgacttca
      781 cgcaccacgc acgtcgaggg caacctcacc gacgcatcga gccagacggg gtgttgtttt
      841 ctcgggatga aggaccagcg taccaggtga tcgtcttggc ccagaggctt gagggttttc
      901 gccccaaccc cgcgggcctg gtggcgacga aagacgccct cagcgccttg acgcttgagc
      961 aacaccagat tggcaaaggt gccaaaattg cggtctccga gcacgacctc accccccttg
     1021 aggtgtgtgc gcagctcttg gaagaggcgt tgttcatgat catggaggtt gccggtgcga
     1081 tagcggctca ccgcgcccgt cgccaacgac atgaaggcca ccaggcgtag aacgggaaag
     1141 ccgcagccgg gcttttgctc cgagggctgg ggataggcgt cttgattggc ctcggtatcg
     1201 ggcagagcaa tgccggtgcc atcgacgaca tggacctgtc gaccccgcca caggtgttca
     1261 tctgagacac ggctgcttag tagttgtcca taaataactc gtacaataga gagaaatcct
     1321 ctacaatctc tccatggaaa aggtagccat ggaagcaggc attcgggaaa agtt
//
LOCUS       DASQSL010000468         1405 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_127167, whole genome shotgun sequence.
ACCESSION   DASQSL010000468 DASQSL010000000
VERSION     DASQSL010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1405
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127167"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..210
                     /locus_tag="VE844_04725"
     CDS             <1..210
                     /locus_tag="VE844_04725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00675.1"
                     /translation="DPQGPERETADPGGALDELFPRGSEACVLVLKDEHGRLLAAQEV
                     KKRGEENVKSFLERFKKLVLDHVKV"
     gene            295..735
                     /locus_tag="VE844_04730"
     CDS             295..735
                     /locus_tag="VE844_04730"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC00676.1"
                     /translation="MMNAPSYLTFTRKCSRPAREIKRALVLLNSTDPTLDNSTLAQRF
                     GVSRATVDHVQRRYRRGGLERALHEAPRSGQPKKITQGEEAYITAIACSKPPAGQARW
                     TMQMIADRLVELRYLEAISEESVRLVLKKTHLTPGRKSIGVSAP"
     gene            723..>1405
                     /locus_tag="VE844_04735"
     CDS             723..>1405
                     /locus_tag="VE844_04735"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC00677.1"
                     /translation="MGTLSGDSLAKMEDVLDLYEAAPDPQRPRLGFDERPCQLIGQIV
                     APLPIKPGRVKREDNEYKRNGTAVVLLAYDPDSGRRFVEVRKRRTKADYADFMYRLVK
                     EHYANVKQIRLVQDNLNPHSYGSFYEHLEAQTAHWLKNKIEFHFTPKQGSWLNMAELE
                     LSALSRQCLDRRIESKEALAHEARAWEQQRHERGVKLSWSFTTTVAREKLKRHYDNLK
                     PKNYLGQALV"
BASE COUNT          333 a          390 c          409 g          273 t
ORIGIN      
        1 gatcctcaag gccctgaacg agaaactgcc gatccgggag gggctctcga tgagctgttc
       61 ccgcgtggct ctgaggcctg tgtgctggtg ctcaaggacg aacacggccg cctcctcgct
      121 gcgcaggaag tgaagaagcg cggcgaggag aatgtcaagt cgtttctgga gcgcttcaag
      181 aagctagtgc ttgaccacgt taaagtttag gattttattg ttggcaaggt tgtatatttc
      241 acctaaaaat ggagatcact aaggccaagc actgtacccc cctgaaactc tcagatgatg
      301 aacgcacctt cctatttgac tttcacgcgc aaatgcagcc gccctgcccg tgagatcaaa
      361 cgtgcgctgg tcctgctcaa cagcaccgat cccacgctcg acaactcaac ccttgctcag
      421 cgttttggcg ttagccgtgc gactgtggac catgtccagc gccgctaccg aagaggtggc
      481 ctggaacggg cgctgcatga ggcaccgcgc agtgggcaac ccaagaagat cacgcaaggc
      541 gaagaagcct acatcacggc cattgcctgc tcgaagccgc ctgcaggaca ggcccgttgg
      601 acgatgcaaa tgattgccga ccgcctggtt gaactgcgtt acctcgaggc gatctccgag
      661 gagagcgtgc ggctggtgct gaaaaaaacg cacttaaccc ctggcagaaa aagcattggt
      721 gtatcggcac cctaagcggt gactccctgg cgaagatgga agatgtactc gatctctacg
      781 aagccgcgcc tgacccccag cgtccgcgcc tgggctttga tgagcgtccg tgccaactca
      841 ttggccagat cgtagccccc ttaccaatca agccaggtcg ggtcaagcgc gaggacaacg
      901 agtataaacg caacgggacc gcggtggtct tgttggccta cgatccggat agcggccgac
      961 gcttcgttga ggtgcgcaag cgccgcacga aggccgatta tgctgacttt atgtaccgtt
     1021 tagtcaaaga acactacgcc aacgtaaagc agatccgtct ggtgcaagat aacctgaacc
     1081 cacacagcta tggctcattt tacgagcatt tagaggcgca gacggcgcat tggctcaaga
     1141 acaagatcga gtttcatttt acgcccaagc aggggtcgtg gctcaacatg gcggaattgg
     1201 agctttcggc gctgagtcgt cagtgcttgg atcgccgcat cgagagcaag gaggcgttgg
     1261 cgcacgaggc cagggcgtgg gaacagcagc gccacgagcg gggtgtgaag ctgtcgtggt
     1321 cattcacgac aacggtggcg cgggagaaac tgaagcgtca ctacgacaat ctcaagccta
     1381 aaaactacct tggtcaagca ctagt
//
LOCUS       DASQSL010000469         1436 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_154808, whole genome shotgun sequence.
ACCESSION   DASQSL010000469 DASQSL010000000
VERSION     DASQSL010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1436)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1436)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1436
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154808"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(192..938)
                     /locus_tag="VE844_04740"
     CDS             complement(192..938)
                     /locus_tag="VE844_04740"
                     /inference="COORDINATES: protein motif:HMM:NF018446.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022841 - potassium ion leak channel
                     activity [Evidence IEA];
                     GO_process: GO:0071805 - potassium ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM175 family protein"
                     /protein_id="HZC00678.1"
                     /translation="MLRRRLAQRRIGGEEGFSWRGQEVSRIEGFADAVFAFALTLLVV
                     SLEVPNTFDELLATMRGFFAFAISGWLLYSVWCDHYRFFRRYGLQDNLTMHLSSVLLF
                     VVLFYVYPLKFLFTALMDDLLGFSTQVGSSTRGVVEKIEPGQWPLLIALFSVGFVVVQ
                     LVFFLLYLRAYALRSLLKLDAYEASRTREELQGYLLLAGVGLVSIAIVLLGGEEAPTW
                     AGWVYLLCWPLMAIHGYIMARRRRKSASLS"
     gene            complement(1271..1436)
                     /locus_tag="VE844_04745"
                     /pseudo
     CDS             complement(1271..1436)
                     /locus_tag="VE844_04745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017944293.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
BASE COUNT          325 a          420 c          389 g          302 t
ORIGIN      
        1 aagtgctcta gttcgcttcg ttcaggttgg cgcaggccac cggcgacggt tctccggaag
       61 cgggggcgtg tacgttgacg tacttgggct tccctgagag caggccttcg agcttgttcc
      121 caacacgcta cagcttcaac cctttccttc cctaagagcc agttggtggc ctcggcagtg
      181 gaacccacca cctaggataa cgatgcgctc tttctcctgc gccgagccat gatgtagccg
      241 tggatagcca taagtggcca gcacagcaag tacacccacc ctgcccaggt gggcgcctct
      301 tccccgccca gcaggacgat agcaatggaa accagcccaa ctcccgcaag tagtaggtag
      361 ccctgaagct cctcgcgcgt tctagatgcc tcgtacgcgt cgagcttgag cagactgcgc
      421 aaggcgtagg ctcgtaagta cagaaggaag aagactaact gcacgacaac gaagcccaca
      481 ctgaagagcg ctattagaag cggccattgc cctggctcta tcttctcgac aacacctcgt
      541 gtggaagagc caacctgggt gctaaagcct agtagatcgt ccatgagcgc ggtgaagagg
      601 aactttaagg ggtatacgta gaaaagcact acgaacaaca gtacgctgct caaatgcatt
      661 gtgaggttat cttggaggcc gtatcgtctg aaaaacctgt agtgatcaca ccacacgctg
      721 tagagcagcc agccagagat cgcaaaggcg aagaaccctc gcatggtagc aagcagttca
      781 tcgaaggtgt tgggcacctc taaggacacc actagcagcg taagggcgaa ggcgaagaca
      841 gcgtcggcaa aaccttcgat acgtgacact tcctggcctc gccaggagaa cccttcttcg
      901 ccgccgatcc gtctttgcgc taatcttcta cgtagcacta cttagtgtct ttctcatgat
      961 cttcctttcc tcctatgtgt ttcctgctaa gggatcgttt tcgtagcgct tacctcaaaa
     1021 ctgctcttct cgcttctgcg cctaagcagc caggagagtg gttagctatc cccggtctac
     1081 aaggagggca caggtcgctg tcctgcgcct tcactacgcg gcgtaagcgg gccacgtaac
     1141 gagtacagca tactcctgtg cgaggggcgg gcgtatcact caaataggct atctttggtg
     1201 ttgcttgggc gttgcttgcg ggtagcgaac ttcggagaac tccgtcatta cgaagttcag
     1261 tctgccccat cacaccgcag gcaatccatt cgtcgcgcct gcgacgcagc gtagtagcag
     1321 aacaggtctc atcggcgatc ctctcatagg cgcagccgaa gaccaacaca tgcaccagct
     1381 tctcgaagac cgtccgatcc ggtatgcggg gccggtggca gccgagcgga tggtcc
//
LOCUS       DASQSL010000470         1054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_111886, whole genome shotgun sequence.
ACCESSION   DASQSL010000470 DASQSL010000000
VERSION     DASQSL010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111886"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            69..>1054
                     /locus_tag="VE844_04750"
     CDS             69..>1054
                     /locus_tag="VE844_04750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018281872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISNCY family transposase"
                     /protein_id="HZC00679.1"
                     /translation="MSVPFGSNALTLSEVAKQLRTAFEIFTDRRRGKNTHYTLVDAGL
                     SAFSVFFMQSPSFLERQRTMQDTQGKDNAQTLFGVHQVPTDNHIRSLLDAVDPAEVYP
                     MFPYIFKGLQQAGVVDSYRAVSNSLLLTLDGTRYFCSQKIHCPYCSTQHHANGQVTYF
                     HSVLTPVVVKPGCDKVIPLAPEFVRPQDGQAKQDCEINAAKRWLGRWGSEYAPLGVTV
                     LGDDLYCHEPFCREMLAQGFEFILVCKPESHPLLYEWIEFLDRDGSVKTQVRKRWTGN
                     RYEIDTYRYVSAVPLRDGDDALVVNWCELTTTTLDGQVVYHNAFATSHTVEDA"
BASE COUNT          218 a          274 c          321 g          241 t
ORIGIN      
        1 atcagcaatt ctcattttga ctttgagaag ctagagtagg tagggtctaa taaccgatag
       61 gtacttccat gagcgttccc tttggttcca atgcactgac cttgagcgag gttgcgaagc
      121 aactgcgcac ggcctttgaa atatttaccg accgacggcg agggaagaat acccattaca
      181 cgctggtgga tgcggggctg agtgcgttct cggtgttttt tatgcagagt ccgtcgtttt
      241 tggagcgtca gcggacgatg caggacacgc aggggaaaga caatgcccag acgctgttcg
      301 gggtgcatca ggtcccgacg gataaccaca tccgttcgtt acttgatgct gtggaccccg
      361 ccgaggtgta tccgatgttt ccctatatat tcaagggctt gcagcaggcc ggggtagtag
      421 attcctaccg agcggtgagc aacagcctgt tgctcacgct ggacgggacc cgctactttt
      481 gctcccagaa gattcattgc ccgtactgct cgacccagca ccatgccaac ggccaggtga
      541 cgtatttcca ttcggtgttg acgccggtcg tggtcaagcc tggttgtgac aaagtgatcc
      601 cgctagcccc ggagttcgtg cggccccagg atggccaggc gaagcaagac tgtgaaatta
      661 acgcggccaa gcgttggtta ggacgctggg ggagcgagta tgcgcccctg ggcgtgaccg
      721 tgctcggcga tgacctgtac tgccacgagc ccttttgccg ggagatgttg gcgcaaggat
      781 ttgaattcat tctggtctgc aaacccgagt cccatccgct gctttatgag tggatcgagt
      841 ttctggatcg tgatggcagc gtcaaaaccc aggtccgtaa acggtggacc ggcaaccgct
      901 acgagatcga cacctatcgg tacgtcagtg cggtgccgtt gcgggacgga gacgacgcct
      961 tggtggtgaa ctggtgtgag ctcacgacca ctaccctgga tggtcaggtg gtgtaccaca
     1021 atgcgtttgc cacctcgcat acggtagagg atgc
//
LOCUS       DASQSL010000471         2085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_3996, whole genome shotgun sequence.
ACCESSION   DASQSL010000471 DASQSL010000000
VERSION     DASQSL010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2085
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3996"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            260..1777
                     /locus_tag="VE844_04755"
     CDS             260..1777
                     /locus_tag="VE844_04755"
                     /inference="COORDINATES: protein motif:HMM:NF024793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZC00680.1"
                     /translation="MNRSQMYEEFYGFRERPFSLLPDPDFLYLSKKHDAALTLLTYSL
                     TNGNALSVIIGEVGTGKTTLIRYLLNHLDKDITVGLITNTHPAFEDLLQWILLAFDLS
                     SLGKSKVERHLIFRDFLEREHARNRRAVLIIDEAQNMSSECLGELVLLSNVSASYNQV
                     LQTVLIGQSGLREILQCPELENVRQHIGVDYHLKPLNREESHDYILHRLKVAGGKDPG
                     LFSADARDTIFRYSGGIPRLINLLCETALVYGFSEQRCTIDTALIEAVARDKKAGEIV
                     PLQDNLWNGSTGPSRSPVFSPADSVTQPYDVFLKHRDSTDSVVEEAFHAMPVQTPLSM
                     PSNRTAATAPKPTSPRQGKARQVALHFGLGLAVGLFGGYWLLSEKEDPRSAVASQVPD
                     EERPAVETADLDSTTERPVAVAELETMSTTALTVPTMVTPGTLPSAPPMLTERGTVRE
                     APGMGVATETALAEAPIELQAMTAKTLSSTSTIPAEERGGRGRESLPLRLRPGTR"
     gene            complement(1903..>2085)
                     /locus_tag="VE844_04760"
     CDS             complement(1903..>2085)
                     /locus_tag="VE844_04760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002636066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HZC00681.1"
                     /translation="TLGALIGAGGYGQPILTGIRLDDIDLILQGAVPAAVMALLVQGL
                     FELAERRLIPKGLRQG"
BASE COUNT          480 a          583 c          589 g          433 t
ORIGIN      
        1 gtatagcatt ccgttcaatt cccatcacag cgacatggag gcgtcgcggg tgatttacat
       61 ttcttggatc aggtgcatta agcatgtcgc tcaagtctgg ggcgttcaca ccgataacgt
      121 gtcaggagct acggcgtgcc ctgcaccgca cgtcagagga actagcctcc atgtggttgg
      181 aggatgccag agaaacggaa agcacaccgc agccatacct gaagccgtta tttttaaaca
      241 ttgctgtacc gagggaggtt tgaatcggag tcaaatgtat gaagaattct atgggttccg
      301 cgaaagacca ttttccctac tgcccgaccc ggattttctg tatctgagca agaaacacga
      361 cgccgcattg acgctgctta cctatagtct gacgaatggt aacgccctca gcgttattat
      421 cggggaagtc gggacgggta agactacctt aatccgctac ttgctcaatc atctggacaa
      481 ggacatcacg gtcggtctga tcaccaacac ccaccccgca ttcgaagacc tactgcaatg
      541 gatactattg gcgttcgacc tgagctctct cggcaagagc aaggttgaaa ggcaccttat
      601 ctttcgtgat tttcttgagc gagagcatgc ccggaaccgc cgtgcggtcc tgatcatcga
      661 cgaggcacaa aatatgtcct cggagtgcct gggtgagtta gtcctattgt ccaatgtgag
      721 tgcaagctac aaccaggtcc tgcaaacagt actgatagga caatcgggcc tgcgcgagat
      781 cttgcaatgc ccagagctgg aaaatgtccg gcaacacatc ggcgtggact atcacctgaa
      841 gcctttaaac cgggaggaga gccacgatta catcttgcac cgtctcaagg ttgcaggagg
      901 caaagacccg gggctattta gcgccgatgc ccgtgacacc atcttccggt atagcggcgg
      961 catcccgcgc ctcatcaatc tcttgtgcga gacagcgttg gtgtatggct tctccgaaca
     1021 gagatgtacg attgatacgg cgttgatcga ggcggttgcc cgggataaga aggcagggga
     1081 gatcgtccca ctgcaagata acctctggaa cggctcaaca gggccgtcgc gctcgcctgt
     1141 attctctccc gcggacagcg ttacgcagcc ttacgacgtt ttcctcaagc atcgcgatag
     1201 caccgattca gtggtagagg aggcatttca tgcgatgccg gtgcagactc ctctatcgat
     1261 gccgagtaac cgcactgcgg ccactgcacc aaagcccact tccccgcgcc aaggcaaggc
     1321 caggcaagtg gcactgcatt ttgggctagg gctcgctgtg ggactttttg gaggctattg
     1381 gctcctttct gaaaaggaag acccgaggtc tgccgtagcg agccaagtgc ccgatgagga
     1441 gcgccctgct gtcgagacag ccgatcttga cagtaccacc gagaggcctg tcgcggtggc
     1501 ggagcttgaa accatgtcta ccacggccct aaccgtgccc accatggtga ccccagggac
     1561 tttgccttct gctccaccga tgctgactga gcggggcacg gttagggagg cccctggtat
     1621 gggggtggcg actgagactg cacttgcgga ggccccgatt gaactccagg caatgactgc
     1681 aaagaccctg tcgtccacct cgacgatccc tgctgaagaa cgaggggggc gggggcggga
     1741 aagcctacca ttgcggttaa ggccgggaac acgctaacga gcatcatcag gcaggtctac
     1801 gggcgctatg acgaggctat tttagaggcg atccttcgcg acaaccccaa gatccaaaac
     1861 cctgacctta tcaaggtggg ccaagtaata cggctgccca gattacccct gccgtagccc
     1921 cttgggaatt agccgacgct cggccagttc gaataatcct tgtacgagca gcgccatcac
     1981 ggctgcagga acggcacctt gaaggatcaa atctatatcg tccaggcgga taccggtgag
     2041 gataggctga ccgtagcctc ctgcgccgat gagcgcgccc agggt
//
LOCUS       DASQSL010000472         1505 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_17779, whole genome shotgun sequence.
ACCESSION   DASQSL010000472 DASQSL010000000
VERSION     DASQSL010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17779"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..1248)
                     /locus_tag="VE844_04765"
     CDS             complement(106..1248)
                     /locus_tag="VE844_04765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC00682.1"
                     /translation="MDDWTCYCRNPKCVLYGQMAPQAWLRYRGWHRHATRFQCHACGA
                     LVSARTGTAYAGIRTEAHTYLLGATALAEGLSIRATGRLLDVDKDTVNHWLPVLGRHC
                     QHVMTYFFRNLHLHECQLDELWTFISKKAAQLTPLEKLAEVYGDAWVWMAFSPMYKLV
                     PAWVVGKRTLRHARRLVFRLKSATDGHIPFFTSDELPHYANALLDVYGVWVTPPRQGT
                     RGRFPNPRRCPPPDLCYAVVVKKREHGRVVHVTTRLVYGTMEQVEAALQASPVSRVIN
                     TYGVECNNLTVRQHSRRMGRKVNAFSRAPDYLEYQLTLAFAYYHFVVPHRGLRRRLPR
                     SLSTKGRNGSRKKWQPVTPAMAARLTDHVWTMDELLSLRVPPKHLW"
BASE COUNT          317 a          437 c          440 g          311 t
ORIGIN      
        1 tccttatgac cgcgggagac gcgaggaagc gctcccgtgc ggttcatcac acaggccctt
       61 ttgtcggtag tgtccctata acgggtacaa aagcgttggg cgtgatcacc acaggtgttt
      121 aggtggcacg cgaaggctca acaactcatc catcgtccag acatgatcgg tcagtctggc
      181 tgccatggcc ggggtgaccg gttgccactt cttgcgcgag ccgttgcggc ctttggtgga
      241 caggcttctt ggcaagcgtc gccgcagacc gcgatgcggc acgacgaagt gatagtaggc
      301 gaacgccagt gtgagctgat attctaggta gtctggggct ctggagaagg cattcacctt
      361 gcgccccata cggcgcgagt gttggcgcac ggtcaggttg ttgcattcca cgccgtaggt
      421 gttgatgaca cggctgaccg gtgacgcttg cagcgccgct tcgacctgtt ccatggtgcc
      481 gtacacgagg cgagttgtga cgtggacgac ccggccatgc tcccgctttt tgaccaccac
      541 ggcgtagcac aaatcaggcg gtgggcaccg gcgcgggttg ggaaagcgac cgcgcgtacc
      601 ttgacgcgga ggcgtgaccc aaacaccgta cacgtctagc aaggcattcg catagtgggg
      661 caattcatcg ctggtgaaga acgggatatg cccatccgtg gccgatttca gtcgaaaaac
      721 cagcctgcgc gcgtggcgca acgtgcgctt gcccaccacc caggctggca ccagtttgta
      781 cattggactg aaagccatcc acacccaggc atcaccgtag acttcggcta gtttctccag
      841 cggcgtcagt tgggccgcct tcttggaaat gaacgtccac aactcatcca attgacactc
      901 gtgcagatgc aagttgcgga agaagtaagt catcacgtgc tgacagtgcc gtcccaaaac
      961 tggtagccaa tgattgaccg tatccttgtc gacatccaac agccgtccgg tggcccggat
     1021 actcaggcct tccgccagag ccgtcgcccc gagcaggtac gtgtgagcct cggtgcggat
     1081 gcccgcgtag gccgtgcccg tgcgagcgga aaccagcgca ccgcatgcgt gacattgaaa
     1141 acgggtagcg tgccgatgcc agccccgata cctcaaccaa gcttggggcg ccatttgtcc
     1201 atacagcaca cacttcgggt tgcgacagta gcatgtccag tcgtccatcg cggcagaccc
     1261 tccgcagaac taatctgcga aggatatctg cctcattagt aggcgtgact aggaaaacag
     1321 tttgtacccg ttatagggac actacccaaa ttttcatttg aggccgtttg cggtatgatc
     1381 tcgctccatg atcaacagta catcatgagg gagtgagacg atggcggtga gcttcaaagg
     1441 cgcccatttc cccaaggaca tcattctcat aggcgtccgg tggtatgtcg cctacccttt
     1501 gagca
//
LOCUS       DASQSL010000473         1580 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_44864, whole genome shotgun sequence.
ACCESSION   DASQSL010000473 DASQSL010000000
VERSION     DASQSL010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1580
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44864"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(239..1168)
                     /locus_tag="VE844_04770"
     CDS             complement(239..1168)
                     /locus_tag="VE844_04770"
                     /inference="COORDINATES: protein motif:HMM:NF015397.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HZC00683.1"
                     /translation="MPPPDVLGGDPVLIRWMIDSLPFKHRYTSGVLSFAPGEIITPAM
                     EKAIMDGFERVAFAGLQPDQYSILWVRHQHAGHHELHFVTPRVELVTGKSLNIAPPGR
                     RTMFDVFRSMINARYGLADPEDVRRARDVSLPNHIARLKADGARKGKALQQDIRKAIT
                     ERVKQEVAAGRISDQDGVVRFLKGEGFTLNRQGKDYISVIEPSGSTKIRLKGVLYSQA
                     PFDAVRANLGQIEPIYDAPDPVKASVLADQLEGMVAARAEYHRNRYGTRPEQGGQPQE
                     SESLREYLRRNLGADALRPRRWQGYGYEPVLER"
     gene            complement(1258..>1580)
                     /locus_tag="VE844_04775"
     CDS             complement(1258..>1580)
                     /locus_tag="VE844_04775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00684.1"
                     /translation="AGGSMARSRIIQIRVDDAEYDVLAQKGAAVGGMSRLLRDHLGKI
                     QVRHRDDELQRLILLNRMNANLNMIAKWVNIHKSEAEAVQVQACLADVRREIGRLLMA
                     MDSR"
BASE COUNT          293 a          497 c          430 g          360 t
ORIGIN      
        1 cataacttta ataatatcag ctatatcaat atggatatcg ttaccgattt catcaatcac
       61 gtgttccaaa taccttgagc tttgcggaag gagcgggcta tgcacgcgac tggaggcaaa
      121 gcagcccccg gcagggtgat acggagcatg atttatcctg atctaatatc catttttaga
      181 gcagactgat ctcctaaggt ctgcttaggt cggatatccg tcatccggga aaggagcatt
      241 aacgctctaa caccggctcg tacccgtacc cctgccagcg ccggggcctc agggcgtcgg
      301 ctcccagatt acgcctcaga tattccctca gagattcgct ttcttgcggc tgtccgccct
      361 gttctggccg tgttccgtat ctgttccgat gatattcggc gcgcgcggca accataccct
      421 ccaactggtc cgcaaggacg gatgccttca ccggatcggg tgcgtcatag ataggctcta
      481 tttgccccag atttgcccgt acagcgtcaa aaggggcttg ggagtagaga acccccttga
      541 gacgtatctt cgtgcttcct gacggctcta tgacgctgat atagtccttg ccctgacggt
      601 tgagggtgaa accttcgcct ttcagaaacc gtaccacgcc gtcctggtcg ctgatgcgtc
      661 cggcggcaac ctcctgcttt acccgttcgg taatggcctt gcgtatgtcc tgctgcagag
      721 ccttgccctt cctggcgccg tccgccttca accgggcgat atggttcggc aggctcacat
      781 cacgggcgcg gcgcacatct tccgggtccg caagtccata tcgggcgttt atcatgcttc
      841 ggaacacgtc gaacattgtc cgccgtccag gcggcgcgat gttcaggctc ttgcccgtca
      901 ccagctccac cctcggtgtt acgaaatgca gctcatggtg tcccgcgtgc tgatggcgta
      961 cccacaagat gctgtactgg tccggttgca ggcccgcgaa cgccacgcgc tcgaaaccgt
     1021 ccatgatggc cttttccatt gccggcgtga tgatctcacc tggggcgaac gataacacgc
     1081 cgctcgtgta tcgatgcttg aacggcaggc tgtcgatcat ccaccggata agtaccggat
     1141 caccccccag cacgtccggc gggggcatcc ggcgcgttcc gtcagggctg tccgtcctgg
     1201 tcaggtagtc caccgcggga ccgccgccgc ctctcccgtg tcgagagaag ccgacaatca
     1261 ccggctatcc atcgccatga gcaggcggcc gatctcccgg cgcacatccg cgaggcaggc
     1321 ttgcacctga acggcttccg cttcgctttt gtggatgttc acccacttgg cgatcatgtt
     1381 gaggttggcg ttcattcggt tcagcaggat gaggcgctgg agttcatcgt cccggtggcg
     1441 cacctggatt tttccaaggt ggtcccgaag cagccgggac atgccgccaa ccgccgcgcc
     1501 cttctgagcg agcacgtcat attcagcatc atccacacgg atctgaatga tacgactgcg
     1561 agccatgctt cctcccgcca
//
LOCUS       DASQSL010000474         1531 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_17819, whole genome shotgun sequence.
ACCESSION   DASQSL010000474 DASQSL010000000
VERSION     DASQSL010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1531
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17819"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..457)
                     /locus_tag="VE844_04780"
     CDS             complement(<1..457)
                     /locus_tag="VE844_04780"
                     /inference="COORDINATES: protein motif:HMM:NF013707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HZC00685.1"
                     /translation="MAVIVNQLKLLAGGEAGDGVFAVSDMLALMFARAGLEVLTTQTY
                     SSRIRGGHINASVRVAERKLLSQGDELDLLIALDLETVELHRRAVRDGGIILYDNSQG
                     EIDLGDLEQRQITVFPIPARKIAREKLNAPIMKNIVMTGAALTTVNFDLD"
     gene            complement(532..1392)
                     /locus_tag="VE844_04785"
     CDS             complement(532..1392)
                     /locus_tag="VE844_04785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007505958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HZC00686.1"
                     /translation="MVTLELYNQNTVKSQWCPGCGDFAVIKALKEALVSLEVHPKDLV
                     ITAGIGCSGRAFAYLNGYSFHGVHGRALPLSTGIKLANEALKVLVLGGDGDGYAIGMG
                     HFPHAIRRNLDLTYVVMNNQTYGLTKGQASPTSDLGFRTTTTPAGNIEGAIDPMAIAM
                     SSGVTFLARGFSGNPKHLTKLFERAIAHKGFSLVDVLSPCVTYNRVNTYDWYREHSFY
                     LDEEPGYDPTDRQRAWEVLLRSDKMPLGVIYEGDRPTYEDLRPTNSREPIALQALNGI
                     DYSAVMEEFF"
BASE COUNT          343 a          441 c          422 g          325 t
ORIGIN      
        1 agtctaaatc gaagttgacc gttgtgagtg cggccccagt catgacgatg tttttcataa
       61 tcggtgcatt cagcttttca cgagcgatct tgcgggccgg aatcgggaag acggtaatct
      121 gccgctgctc cagatcaccg aggtcgatct ccccctggga gttatcgtaa agaatgatcc
      181 caccgtcccg gacggcgcga cgatgcaact cgacggtttc gaggtcgagg gcgatgagca
      241 gatccagctc atcgccttgc gagagcagtt tccgctcagc cacccgcacc gacgcgttaa
      301 tatgcccacc acggatgcga gaggaatacg tctgggtggt taacacctcg aggcccgccc
      361 tggcgaacat caacgctagc atgtcagaga cagcaaagac cccatccccg gcctcgccgc
      421 cagctaagag tttcagttga ttgacgatca ctgccacatc ctccctcctc agaaagcctc
      481 ggagcaggtg acttcttcgg ttcccccgag ggtttcgggt gtcgaccctg gttagaaaaa
      541 ctcttccatg actgcagagt aatcaatgcc attgagtgct tgcagggcga tgggctcacg
      601 tgagttggtc ggacgcaggt cttcatacgt cgggcgatca ccttcataga tcacgcctaa
      661 gggcatttta tcgctgcgca gcaagacctc ccaagctcgc tgccggtctg tcgggtcgta
      721 gcctggctct tcatcgagat agaatgaatg ctcgcggtac cagtcatagg tattcacacg
      781 gttatacgtc acgcacggac tcaagacatc caccagtgaa aagcctttat gagcgatggc
      841 acgttcgaac agtttggtca ggtgcttggg atttcccgaa aatccccgcg ccaggaacgt
      901 cacccccgaa gacatcgcaa tggccatggg atcgatcgcg ccctcgatgt tcccggcggg
      961 ggttgtcgtg gtccgaaagc cgaggtcact cgtcggcgaa gcctgcccct tcgtgagccc
     1021 ataggtttgg ttattcatga ctacataggt caggtcaaga ttgcggcgga tggcgtgtgg
     1081 gaaatgcccc ataccgatgg cgtacccatc tccgtcgccg ccgaggacga gcaccttcag
     1141 agcttcgttg gccagtttga tacccgtgga gagcggcaag gcacgtccgt gaacaccatg
     1201 gaaggaataa ccgttcaggt aagcaaaagc tcggccagag cagccaatgc cagcggtaat
     1261 gactaaatcc ttcgggtgca cttctaagct gacaagggcc tctttcagcg ccttaattac
     1321 cgcgaaatcg ccgcagcctg ggcaccattg ggatttcacg gtgttctggt tatacaactc
     1381 gagggtaacc atcggataaa cctccttcag tcaagcagtc gcgcaatgca taacagcgct
     1441 ggccgcgatc agtcgcatct gagggagcgg actgcgcgct tcctgccaag ccaggagcca
     1501 catatactgg cggcctcaag attctactat a
//
LOCUS       DASQSL010000475         1386 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_181376, whole genome shotgun sequence.
ACCESSION   DASQSL010000475 DASQSL010000000
VERSION     DASQSL010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1386
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181376"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            550..>1386
                     /gene="rho"
                     /locus_tag="VE844_04790"
     CDS             550..>1386
                     /gene="rho"
                     /locus_tag="VE844_04790"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014552090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HZC00687.1"
                     /translation="MNLAELKDKTVADLNMVAKELNVTGTSGLRKQELIFRILEAQTE
                     KNGLVFGEGVLEILPDGFGFLRAPSSNYLPGPDDIYVSPSQIRRFDMRTGDTISGQIR
                     PPKEGERYFALLKVEAINFENPELAKDKILFDNLTPLYPEKRVRLERPDGELSTRIMD
                     LLTPIGMGQRGLIVAQPRTGKTMLLQSIANSITANHPEMILMVLLIDERPEEVTDMQR
                     SVKGEVVSSTFDEPAQRHVQVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTIQP
                     ASG"
BASE COUNT          317 a          400 c          385 g          284 t
ORIGIN      
        1 gcgtctccgg ttctctcgct ggcgggagag tgatagtctc ctattatcgg cgttcgatcg
       61 cattagaatt gtgacttcgg cagagacaga ccgagcgccc cgctattctg tgccgcgcga
      121 tttccgtgtc catgcacgac cccttgggta atcccagtcg atcgatgatg actcgatgga
      181 tcacgagccc gtgtgttggt gcataccaat cccccggaaa ctctcccact cacagtgttg
      241 gccagtgtgt acccctccat ggttttctct actttggtga tgagcacaca acggctgaaa
      301 gtcagctcag accatgggta cacggaccgc agccgggggc tctggcgaac gcgaaccacc
      361 gccgctctgg cgcaaagaac tcgacatgac tcatccccca gtgactgaca acacctctat
      421 accgaccgtg agcactgtaa agtggtgtgc cccaggctgg ggcgaagaga tcctgtctat
      481 caagcaagtg tataacgaca gtaggtagcc tttatctata atcgatgttt gtgtggtgag
      541 gtaagaagaa tgaatttagc tgaattgaaa gacaaaaccg ttgccgacct gaatatggtc
      601 gcgaaagagc ttaacgtgac ggggaccagc ggcctccgca aacaggagct gattttcaga
      661 atcctcgaag cgcagaccga gaaaaatggg ctcgtctttg gagaaggtgt gcttgagatc
      721 ctgcccgacg ggttcggatt ccttcgagcc cccagctcca actacctgcc aggtccggat
      781 gacatctacg tgtccccctc gcagatccgt cggttcgaca tgcggacggg cgacaccatt
      841 tccggtcaga ttcgacctcc caaagaaggc gagcgctact tcgccttgct caaggtcgag
      901 gcgatcaatt tcgaaaatcc cgagctcgcc aaagataaaa tcctcttcga caacttaacg
      961 ccgctctacc ccgagaagcg tgtgcgcctt gagcgcccgg atggcgagct gtcgacgcgc
     1021 atcatggacc tgctgacgcc gatcgggatg ggacagcgcg ggttgatcgt ggcgcagccg
     1081 cgcaccggca agacgatgct cctgcaatcg attgccaaca gtattacggc caatcaccct
     1141 gagatgattc tcatggtcct gctcatcgat gagcgccccg aagaagtgac cgacatgcag
     1201 cgctcggtca agggcgaggt ggtgagctcg acgttcgacg agccggcgca gcgccacgtc
     1261 caagtcgcgg agatggtgat cgaaaaagcc aagcgtctgg tcgaacataa acgcgacgtg
     1321 gtcatcttgc tggatagcat cacccgtctg gcacgtgcct acaatactat tcaaccggcc
     1381 agcggc
//
LOCUS       DASQSL010000476         1252 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_72346, whole genome shotgun sequence.
ACCESSION   DASQSL010000476 DASQSL010000000
VERSION     DASQSL010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72346"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..400)
                     /locus_tag="VE844_04795"
     CDS             complement(<1..400)
                     /locus_tag="VE844_04795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015693578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HZC00688.1"
                     /translation="MPYCYHYPHPAVTTDVVLFTIQDERLEVLLIRRGSEPFKGRWAL
                     PGGFVDIDEDLLACAKRELEEETGVTGIYLEQLYTFGTPDRDPRERVISVTYYALVPR
                     ERLTIRAASDAEAVAWFPFQQLPPLAFDHDQ"
     gene            complement(469..>1252)
                     /locus_tag="VE844_04800"
     CDS             complement(469..>1252)
                     /locus_tag="VE844_04800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015005102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HZC00689.1"
                     /translation="RKTIDGYTEFVGIYGAKGLAYIKVNDRHRGCEGLQSPILKFLPD
                     EVLEGILLRTGADTGDLIFFGTDEAKIVNESLGALRIKLGQDLGLVQEGWRPLWVVDF
                     PLFEWNKEEHRWEALHHPFTAPKVNAPAELEVAPGTCLSRAYDMVLNGTEIGGGSVRI
                     HRREMQQSVFRLLGINEEEAQEKFGFLLEALKYGCPPHGGIAFGLDRLVMLMTGSSSI
                     RDVIAFPKTQTAACPLTSAPSNAADAQLRELGISLRKPPKIN"
BASE COUNT          277 a          369 c          360 g          246 t
ORIGIN      
        1 tttggtcatg gtcaaaagcg agcgggggga gttgctggaa aggaaaccag gccaccgcct
       61 ccgcatccga ggccgcacgg atcgtcagcc gctcccgcgg caccagggcg taataggtga
      121 cagaaatgac ccgctcccgc ggatcccgat cgggcgtgcc aaaggtatag agctgctcga
      181 gatagatgcc ggtgacgccg gtttcttcct cgagctcgcg tttagcacac gcgagcagat
      241 cctcatcgat atccacaaaa ccacccggca gggcccaacg tcccttaaaa ggctcggaac
      301 cgcggcggat caatagcact tccagccgct catcctggat ggtgaagagg acgacatcgg
      361 tggtaaccgc cgggtgcgga tagtgatagc agtaaggcat aggctgctta gtgtatgtct
      421 tacactaaaa gatagtgtaa gacatacact attgcaagag ggtagtctct aattgatctt
      481 cgggggctta cgcaagctga tcccaagctc gcgcaactgg gcatcggccg cgttgctcgg
      541 tgccgatgtc aggggacagg ccgcagtctg ggtcttggga aaggcgatca catcccgtat
      601 agaggaggag ccggtcatca gcatcaccag ccggtccagg ccgaaggcga tgcctccatg
      661 cggcgggcac ccatatttta aggcctcaag cagaaaccca aatttctcct gcgcctcttc
      721 ctcattgatc ccgagcagcc ggaatacaga ctgttgcatc tcgcgccggt gaatacgcac
      781 ggacccccca cctatctccg tgccattgag gaccatgtca taggcccgtg acaggcaggt
      841 tccaggcgcc acctcaagct cggctggggc gttgaccttg ggggcggtaa agggatggtg
      901 gagggcttcc cagcgatgct cctccttatt ccattcaaac agggggaagt cgacgaccca
      961 taaaggccgc cagccctcct gcaccagccc cagatcctgt cccagcttga tcctgagcgc
     1021 acctaaggat tcattgacga tcttcgcctc atcggtgccg aagaagatca gatcgcctgt
     1081 gtctgccccg gtgcgtaaca gaattccttc gaggacctca tcgggcagga atttcagaat
     1141 gggagattgc aagccttcgc acccacgatg ccggtcattg accttgatat aagccagccc
     1201 cttggcgccg tagatgccga cgaattcggt gtagccgtcg atggttttgc gc
//
LOCUS       DASQSL010000477         1169 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_44895, whole genome shotgun sequence.
ACCESSION   DASQSL010000477 DASQSL010000000
VERSION     DASQSL010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1169
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44895"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..285
                     /locus_tag="VE844_04805"
     CDS             <1..285
                     /locus_tag="VE844_04805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012527222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter substrate-binding
                     protein"
                     /protein_id="HZC00690.1"
                     /translation="FPSFPNTVPDLQELIAQDAKGDPPDKYKILGDFINNATNVGYPG
                     YASAAIDEVFSTFVIPTMFAKAARDELSPEEAIKAAEREMRRIFGKWEKV"
     gene            367..>1169
                     /locus_tag="VE844_04810"
     CDS             367..>1169
                     /locus_tag="VE844_04810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012527224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HZC00691.1"
                     /translation="MERRQRKGLINFFDRAAWLGPIMLAPAILYILALIAFPFCLALL
                     YSVSDVTTGSQTITFVGLDNFKGILESPTFHRALKNTFIFTFTSQILVMVLAQIMALA
                     LQQTFPGKPIVRFLLLLPWVSPIALGTIGWKWMYDSLYSVINWTLQALHIIGPNTWPY
                     WLGEPDLAMMAVILVHVWRMFPFATVILLAGLTSLPQEVLEAAAVDGAGFWRRLFQII
                     LPMLRPIMTVAVLFGVVFTFADMTVIYVLTRGGPYDSTHVLGSLAFFVG"
BASE COUNT          220 a          354 c          340 g          255 t
ORIGIN      
        1 ttccccagct tcccgaacac cgtacccgat ctgcaggaac taatcgcgca agatgccaaa
       61 ggtgacccgc cggacaagta caagatcctt ggggatttca tcaataacgc caccaacgtc
      121 ggctaccccg gatacgcctc cgccgccatc gacgaggttt tcagcacctt tgtcatcccg
      181 accatgttcg ccaaggccgc gagggatgag ctcagccccg aggaggccat caaggccgcg
      241 gagcgcgaga tgagacgcat cttcgggaaa tgggagaaag tctaacctca tctgcctccc
      301 tctcgcccgg agagaggcag ggtgagcggg cggggaaaac agccgagggg ggacgagggt
      361 gatcgcgtgg aacgcaggca acggaaaggg ctgattaatt tcttcgaccg ggcagcgtgg
      421 ctgggaccga tcatgctggc cccggccatt ctctacattc tggcgctgat cgcctttccg
      481 ttctgcctgg cgctcctcta tagcgtgagt gatgtcacga ccggcagtca aacgataact
      541 ttcgtaggat tggacaactt taaaggtatt cttgaaagtc ccaccttcca tagggccctc
      601 aagaacacct ttatcttcac cttcacctcc cagattctgg tcatggtgct cgcacagatc
      661 atggcgctcg cgttgcaaca aaccttcccc ggcaagccga tcgtgcgctt cctcctgctc
      721 ttgccctggg tgtcgcccat cgccctcggg accatcggct ggaagtggat gtacgattcc
      781 ctctatagcg tgatcaattg gacgctccag gccctgcaca tcatcggccc gaacacctgg
      841 ccttactggc taggtgagcc cgacctggcg atgatggcgg tgattctggt ccacgtgtgg
      901 cgcatgttcc cttttgccac ggtcatcctg ctggccggac tgacgtccct cccacaagaa
      961 gtgctggagg ccgccgcggt cgacggcgcg gggttttggc gacggctgtt tcagatcatc
     1021 ttgccgatgc tgcggccgat catgacggtg gccgtgctct tcggcgtggt ctttaccttc
     1081 gcggatatga cggtgatcta tgtgctgacc cgcgggggcc cgtatgattc aacgcacgtg
     1141 ttggggagtc tggcgttctt cgtgggtat
//
LOCUS       DASQSL010000478         1222 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_17831, whole genome shotgun sequence.
ACCESSION   DASQSL010000478 DASQSL010000000
VERSION     DASQSL010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1222
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17831"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..238
                     /gene="thiS"
                     /locus_tag="VE844_04815"
     CDS             <1..238
                     /gene="thiS"
                     /locus_tag="VE844_04815"
                     /inference="COORDINATES: protein motif:HMM:TIGR01683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HZC00692.1"
                     /translation="GSASFIGYNFIMTMQVTINGNVMKIQEGYTITHLVEQLAVKGRF
                     AVEVNEAIVPRSEYANYPLQAGDRVEVVRAIGGG"
     gene            263..1066
                     /locus_tag="VE844_04820"
     CDS             263..1066
                     /locus_tag="VE844_04820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009147802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HZC00693.1"
                     /translation="MLPASQILENDYLTVGGTTYRSRLLVGTGKYRDLEQTRLAIEAS
                     GAEIVTVAIRRTNIGQNRNEPNLLDVIPPNRYTILPNTAGCFDANAAIRTCRLAQELL
                     DGHNLVKLEIMGDEKTLFPDIPETLKAAEILIKERFKLMVYTNDDPIMAKRFEKMGCV
                     AVMPLAAPIGSGLGIRNPYTIRTIVENAQVPILVDAGVGTASDATIALELGCDGVLMN
                     TAIAQAKHPVLMASAMKKAVEAGRMAYLAGRIPRRAYASASSPIDDTFL"
     gene            1085..1177
                     /locus_tag="VE844_04825"
                     /pseudo
     CDS             1085..1177
                     /locus_tag="VE844_04825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014147263.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
BASE COUNT          291 a          301 c          347 g          283 t
ORIGIN      
        1 aggctcggca agctttatag gctataattt tataatgacc atgcaagtca ccattaatgg
       61 caatgtgatg aagatccagg agggctatac cattacccat ctggtcgaac agttggccgt
      121 caagggtcgg tttgcagtcg aggtaaatga agccattgta ccgcgcagtg aatatgcgaa
      181 ttaccccctt caggccggtg accgggtcga ggtcgttcgt gcgatcggcg gtggctagcc
      241 ctgtgatcta tactataagt tgatgttacc cgcctctcaa attctcgaaa atgattatct
      301 aacggtcggt gggaccacgt atcgatcccg gttattggtc gggacgggga agtaccgcga
      361 tctggaacag acgcggctag ccatagaggc gagcggggcc gagatcgtga ccgtggcgat
      421 ccggcggacg aatattgggc agaataggaa tgaacccaat ctcctcgatg tgattccacc
      481 caatcgctac acgatcctgc ccaataccgc cggttgtttc gatgcgaatg ccgctattcg
      541 cacctgccgg cttgctcaag agttgctcga tggccataat ctcgtcaagc tcgagatcat
      601 gggggatgaa aagaccctgt tcccggatat ccccgaaacc ctcaaagcgg ctgagatatt
      661 gatcaaagag aggtttaagc tcatggtcta caccaatgat gatccgatca tggcaaaacg
      721 ctttgagaag atggggtgtg tggcggtcat gccgctcgcg gcacccatcg gctcggggct
      781 tgggatccgt aatccttaca ctatccgcac gattgtcgag aacgcccagg tgccgatcct
      841 ggtggatgcc ggggtaggta cagcctcgga tgccaccatt gccctggaac taggttgtga
      901 tggcgtgctc atgaacaccg cgattgccca agctaagcac ccggtattga tggcctctgc
      961 catgaaaaag gcggttgagg ccggacggat ggcttatctc gcgggccgca taccgcggcg
     1021 ggcctatgcc agtgcttcat cacctataga cgacacattt ctctaagttg cgaaagagtc
     1081 gagtatgctg aaagcgctca agatagaacc agaattatgc accggctgtc tgcaatgcga
     1141 gctggcttgc tcctatgaga atgagggagt atttaacatt gagttgcaaa gattaacttt
     1201 gtggtaacga ggttagtttg tg
//
LOCUS       DASQSL010000479         1329 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_44917, whole genome shotgun sequence.
ACCESSION   DASQSL010000479 DASQSL010000000
VERSION     DASQSL010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1329)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1329)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1329
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44917"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          266 a          434 c          318 g          311 t
ORIGIN      
        1 caagctcctg cgaatctgca ttagtccatg ggaatgcgtt aatgtcggga tagaaatgca
       61 gcgcgcgcat ggttaggtca atgacttcca ctatatccac cgtttccggc gtcgtggcaa
      121 atggtcatta gaccctgcat cacgtttccg caagcccccc tgcgatcccg gacggtcgga
      181 tctcccgagt ccggttctga ccttggctta tactcttact gccttcccgg tacagcggaa
      241 gcttaaatgc tggcccatat acaccccaca ccctatcggt ttacaagtaa gtctcgatct
      301 gttcccaggc tacggatcat ccgttgcgtc cggctctgtg tccgggctgc gcctgttcca
      361 aacccgccaa gtgcccagag cccctttgca cggttcaagg tgttacctct cccgtcaggg
      421 tgtcttgcac cccgtcagca ggcgtgactc cgccttcatc gctcctacgg gctcatgcgc
      481 caatcctaaa ccctccccgc gcctcagaat taccctcgca cccggggtct ttacaggttg
      541 ctaccagccc ctgctgggag taggaccttc ccgacattat ctctgcgaat ctttcccaac
      601 gtgcctggac ccataccccg gcggccccca aggtgccttc actcgtttct tccctcaggg
      661 catcggcctt ccccgatctt gcagcgggtc ggcgctccac catgtcctgg acagccactt
      721 cagtccaggg ggtcttttcg gggctgcagc catttcgtca tgttcaggcc cgccagtttg
      781 cttgccaccc aggtggctcc caccgccgcg ccctttccag gcgtcgggca gccgtggctt
      841 ctacttctgg gcaccccaca gttcgttacc tccccgtggt ccagataggc tagccgtccg
      901 aatcgagcaa ttgacagcgg gaagacttgc actccccaag attcgcagcc ttgtcggctg
      961 caccgcaaga cctggccctg agtcctgcgc taattaagaa aagacaaatc aagtgcggac
     1021 gatctcaatc gctggtacga ttttctccct gatcgcttta cggtaaaagg tcatgtccaa
     1081 tgtatagaat ggaacatccc cagcgctcgc caaatgcaat gcgctagcag aatcagcgct
     1141 ggtttctttc atagtgtcgt agccctcgta ggctgggatg accaaaggga atcccagcaa
     1201 cagacctgaa acgctaggtt tcgttcctca acccagccta cacaggcttg tcgagcagtc
     1261 acaccgtcta tctatgatgt aatcgtctca aaggctactt gtaaacgagc gaactttggc
     1321 acaataaaa
//
LOCUS       DASQSL010000480         1290 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_194110, whole genome shotgun sequence.
ACCESSION   DASQSL010000480 DASQSL010000000
VERSION     DASQSL010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194110"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            160..1158
                     /locus_tag="VE844_04830"
     CDS             160..1158
                     /locus_tag="VE844_04830"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HZC00694.1"
                     /translation="MLLEKIVIPLLHTIGAEWHDSDLRVIHERVASAHVRSFLGGLLN
                     TSNRGHFGPMLLATTPLGQQHELGVLILAVTAAISGWNALYLGANVPAREIVAVVVQT
                     GALAVSLSITFPTNDPCLPEELRRLRHYLPDSVRLLVGGNGAWGYREVLDEIGAIQLG
                     SLRELCQELDALRAPTQALRPTTAQRVHFAPKQEGEGRVQGAVATVVTSEWIWEQDSS
                     GRYIYSNAVVKDLLGYEPEEVLGKHYLGLFTREYREHTTAEFPDSVDPSPKDRFFHLI
                     NRYHHKDGHEVITESTGEPVFDEEGNLIKWRGMDRDIRARERFEEALRGSERAKAE"
BASE COUNT          301 a          337 c          372 g          280 t
ORIGIN      
        1 cacaaaaaag gtataaaaac tgccgaccat gaaacctcct gtgcaaagtg atgaccccta
       61 tcccagcatg cctggcgctg agctacccca gcgtgttcgt gcgcgccaac ccgcaggaga
      121 gtgtatacga ctttctcggc aggggtacta ggcattctga tgctactcga aaaaatcgtg
      181 atccctttgc tgcataccat aggagccgaa tggcatgata gcgacctgcg ggtgatccat
      241 gagcgtgttg ccagcgcgca tgtgcgctca ttcttaggtg gcctgcttaa cacgagtaac
      301 agaggtcact tcgggcccat gcttctagcg acgactccct taggccaaca gcatgagctg
      361 ggcgtactga tactggccgt aaccgcggcc atcagtggtt ggaacgcact ctatctcggt
      421 gctaatgtcc cggccaggga gatcgttgca gtcgttgtcc agacaggtgc gcttgctgtt
      481 tccttgagta ttacctttcc cactaacgac ccgtgcctgc cggaggaact acgccggctg
      541 cggcactacc tgcccgatag cgtccggcta ctggtaggtg gcaatggtgc atggggatat
      601 cgggaggttc ttgatgaaat cggtgccata cagctgggct cgctacgtga gctgtgtcag
      661 gaattggacg ccttgcgggc gcccacccag gccctgcgcc caaccacggc tcaaagagtg
      721 cattttgctc ccaagcaaga aggggaaggg cgcgttcaag gagcagtagc tactgtggtt
      781 actagtgagt ggatctggga acaggactct tccgggcgtt acatctatag caatgcggtc
      841 gtcaaagacc tcctcggtta tgagcccgag gaggtgctcg gaaaacatta tttagggctc
      901 ttcacccgcg agtatcgaga gcatacaacg gcagagtttc ctgacagtgt cgatcctagc
      961 cccaaagatc gtttcttcca cctcataaac cgctaccatc ataaggatgg ccatgaggtc
     1021 atcacggaat ctactggcga acccgtattc gatgaggagg gtaatctgat caagtggcgc
     1081 ggtatggatc gcgatatcag ggcgcgcgag cgatttgagg aagcattgcg agggagcgag
     1141 agggctaagg cagaataaga tagggcgcac ttgtcaccac tagccgatgg ggagaataat
     1201 agagaataat aagaataatc gccgatttcc acggggcggg tagcacccca cttaaccgtg
     1261 gtcacgctgc cattgccatt attggttgtg
//
LOCUS       DASQSL010000481         1600 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_58498, whole genome shotgun sequence.
ACCESSION   DASQSL010000481 DASQSL010000000
VERSION     DASQSL010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58498"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            274..1389
                     /locus_tag="VE844_04835"
     CDS             274..1389
                     /locus_tag="VE844_04835"
                     /inference="COORDINATES: protein motif:HMM:NF016847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00695.1"
                     /translation="MQIPTTRVDKATFKQIFRDYGEAFWQRYGHYFDVNVRDVVDRML
                     GCGDLASGYSTYRCEHCHEVKRVAFSCKSSFCLSCCKVYIDEWVRHIGRTLYEGVPYR
                     HVVLTVPDVIRMPFFHDRSLLADLMKCGVQMLSEALSWFKKVSLQGGYVVVLETAGRA
                     GNWNPHLHILMTSGGVTPKNRWQAVNYFPYDELHKGWQYHLLTRLKVRVATPEMKQQI
                     DGLWQKYPNGLVAYLEEGQVPGGGQGLAYYLAKYVVSPPISLRRILGYDGQHVRYWYN
                     DHKSGKRKVTELPVLRFMGRMVQHILPKGFHRIRYDGLHATCKHQRVKSLLQRLWVAM
                     GRAIKGTYRVVTRPSTKSGCWPARVVIRCVALVVVVR"
     gene            1386..>1600
                     /locus_tag="VE844_04840"
     CDS             1386..>1600
                     /locus_tag="VE844_04840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00696.1"
                     /translation="MMLWQVWHPRYGVVYDEVEQIKRGRYDPGGVVLAGDDMACERRA
                     PEIQLEWSFIRMGETIRGDYDGCTWGV"
BASE COUNT          326 a          369 c          513 g          392 t
ORIGIN      
        1 ttgggataat ctgcggacga agaaagatgg agcagagcgc attatggatc gcctggcgat
       61 ccaaagcaaa atatgtgcgg ctctatgctg catccctaaa tcagcccgtc acacctctac
      121 tccattcctc ccttccgtaa cttgatcgta taggagtttc cttttttagt ttctgatccc
      181 gtcctgcagt ggggagctgg atgagtgtcg gtgtctctga gaagacgatg ttggggtaga
      241 ctcggacgtc tggccatgct attcgtgtcg attatgcaaa tcccaaccac acgcgtcgat
      301 aaagcgacct ttaagcagat cttccgcgat tacggggagg cattctggca acgctatggc
      361 cactacttcg acgtgaacgt tcgcgacgtg gtcgacagga tgctgggctg tggcgatctc
      421 gcctcgggct acagcaccta tcggtgtgaa cactgtcatg aagtgaaacg ggtggcgttt
      481 agctgcaaga gtagcttttg tctgtcgtgt tgcaaggtat atatcgacga atgggtgcgc
      541 catattggcc ggaccctcta tgaaggggtg ccctatcgtc atgtcgtgtt aacggtgccg
      601 gatgtgatcc gcatgccctt ttttcacgat cgttctttgt tagctgacct gatgaaatgc
      661 ggcgtgcaga tgctcagcga ggcgctgtcg tggttcaaga aggtctcctt acaagggggc
      721 tatgtggtgg tcttggagac ggcgggtcga gcgggcaact ggaaccccca tctacatatc
      781 ctgatgactt caggtggcgt gacgccgaag aatcgctggc aagcggtcaa ttattttccc
      841 tatgacgagc tccacaaggg gtggcagtat catctgttga cgaggttgaa agtgcgtgtg
      901 gccacacccg agatgaagca gcaaattgat gggctctggc agaagtatcc caatggattg
      961 gtggcgtatt tggaggaggg gcaggtccct ggcggtggtc aaggtctggc ttattacctg
     1021 gccaagtacg tggtgagccc gccgatctcg cttcggcgca tcctgggtta tgacgggcag
     1081 cacgtgcggt attggtacaa cgaccataag agcggtaagc gtaaagtaac ggagctgccg
     1141 gtgctcagat ttatgggccg catggtgcag catattttgc ccaaggggtt tcaccggatt
     1201 cggtatgacg gtctgcatgc gacgtgcaaa catcaacgcg tgaagtcgtt acttcagcgg
     1261 ctctgggtgg caatgggtcg ggcgatcaag ggcacctatc gggtcgtgac gcgtccgagt
     1321 accaagagcg ggtgttggcc agcacgggtc gtgatccgct gcgttgccct cgttgtggtg
     1381 gttcgatgat gctgtggcag gtctggcatc cccgttatgg ggtggtctat gacgaggtgg
     1441 aacagattaa gcgaggtcgc tacgaccctg gaggtgttgt gctggcaggg gacgatatgg
     1501 cttgcgagag gcgagcccct gagattcagt tggagtggtc gtttatacgg atgggagaga
     1561 ccatccgagg cgattatgat ggatgcactt ggggtgtcga
//
LOCUS       DASQSL010000482         1371 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_140957, whole genome shotgun sequence.
ACCESSION   DASQSL010000482 DASQSL010000000
VERSION     DASQSL010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1371
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140957"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            231..1181
                     /locus_tag="VE844_04845"
     CDS             231..1181
                     /locus_tag="VE844_04845"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HZC00697.1"
                     /translation="MTHLRWLVSWTALVVLGCLGAPSGEAQQPWCPSKYGPTDVLGAI
                     NEITPAKVLQATKLVREGKVYEMGVLLEKGVPAPRSRYWTQMIVRGVPFGVRGKNKLV
                     SIEEVVSGTYQIGTQLDGLGHIAVDNLFYNCLKGEEIVADWGVSKIGIENVPPVITRG
                     VLVDIAGYKGVPMLEGGYVITVEDVEGALKKQGDLKVEAGDVVIFHTGWLSLWMKDNK
                     KFSESEPGIGKAAAQWLIDRRVAMVGADNWALEVQPGEEKEESSPVHQMLIPHNGIYI
                     LENLVTEPLARDRGYEFMFVLTHSKTKGSTGANISPAAVR"
BASE COUNT          275 a          365 c          468 g          263 t
ORIGIN      
        1 agcagcatgc atacgatctc tctggccttc gaacgttctc tgccagactg cttgtccgcg
       61 tgtttttgac ttaaccaaca gagtcaattg tgacgcggtt tgggcagggt ccctgcaatt
      121 ttccttgaca cgcgctcgga gcgcatgcaa aaagcctctg cagggggcat ggcccgggac
      181 agcggcgata gagaggccac cggcgagagc acaggaggga ggacaggagg atgacacatc
      241 tgcgatggct cgtgagctgg accgccttgg tcgtattggg gtgcctgggg gcgcccagcg
      301 gggaggcaca gcaaccgtgg tgcccgtcga aatatgggcc caccgatgtg ctcggggcga
      361 tcaatgagat tacccccgcg aaggtcttgc aggccactaa gctcgtgcga gagggcaagg
      421 tctatgagat gggggtcctc ttggagaaag gggtacccgc gccgcgctcc cggtactgga
      481 cgcagatgat cgtgcgcggc gtgccgttcg gggtccgggg caagaacaag ctggtctcga
      541 tcgaggaggt ggtgtcgggc acgtatcaga ttgggaccca gctcgatggg ctcggccata
      601 tcgccgtgga taacctcttc tacaactgcc tcaaaggcga ggagatcgtg gccgactggg
      661 gggtgagcaa gatcggcatt gagaacgtgc ctcccgtgat cacccgcggg gtgctggtcg
      721 atatcgctgg ctataaaggt gtgccgatgc tcgagggggg ctatgtcatt acggtggagg
      781 atgtggaggg ggcgttaaag aagcaggggg acctgaaggt cgaggctggc gacgtggtga
      841 tctttcacac cggctggctg tcgctgtgga tgaaggataa caaaaagttt agcgagagcg
      901 aacctgggat cggcaaggcg gccgcgcagt ggttgatcga tcggcgggtg gcgatggtgg
      961 gggccgataa ctgggccctc gaggtgcagc cgggtgagga gaaagaggag tcgtccccgg
     1021 tccatcagat gctcatcccg cacaatggta tttacatcct ggaaaacctg gtcacggaac
     1081 ccttagcgcg ggatcggggc tacgaattta tgttcgtgct cacgcattcc aagaccaaag
     1141 gctcgaccgg tgcgaacatc tccccagcgg cggtccggta ggaacgggtg tagaggggga
     1201 ggcctctcgt catggaggct tcttcccagc ccagcacctg ccgcactatt cccgttgaca
     1261 cccctgctca accccactac actcgcgcct acctactttt gcgcacggtc gctgtgagag
     1321 agaggaggtg gaccatgtac cagcatatcc tcttagccgt cgcgctccag c
//
LOCUS       DASQSL010000483         2131 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_4157, whole genome shotgun sequence.
ACCESSION   DASQSL010000483 DASQSL010000000
VERSION     DASQSL010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2131
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4157"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..185
                     /locus_tag="VE844_04850"
     CDS             <1..185
                     /locus_tag="VE844_04850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00698.1"
                     /translation="QKFAAMQRVDVHLPTIDGRYLILLRYTQPDQDQRLLLSQMKMEL
                     PKQPLPKITSNATLTA"
     gene            complement(357..>2131)
                     /locus_tag="VE844_04855"
     CDS             complement(357..>2131)
                     /locus_tag="VE844_04855"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HZC00699.1"
                     /translation="GRSLEQERGYPWLQDVHPEDLDRCLRAYATAFDMHQLLRIEYRM
                     KRHDMVYRWLLDSVVPRYLPEGTFVGYIGGAIDITERKQAEASRDQLAAIVESSDDAI
                     IGKTLEGIITSWNSGAEKIFGYKASEVLGQPISILIPPGYPNEELQILERLKRGECSE
                     HYETVRIRKDGRLIDVSLSISPVMETTGKIIGASEIARDITEQKRAEEALLHAQKMEA
                     VGQLTGGLAHDFNNLLTIISGNLQMLEDSLGNDPLPRKLVQSARKAAGRGAELVRRLL
                     AFSRRQALQPQVVNLNEIVAGMIPLLHRTLAENVEIATVEATALWPALADPAQLETAL
                     LNIAVNARDAMHRGGKLTIETGNVVLDAAYPAHEAEITPGEYVMLAVSDSGTGMSAET
                     VKRAFEPFFTTKAAGEGTGLGLSMIYGFIKQSCGHVKIYSELGQGTTVKLYLPRSKSV
                     AKPVVRRHAFEVQHARSGETILVVEDEADVRELAVAFLTELGYRVFEAAEAQAALGLL
                     EREPTIDLLFVDLVLSGIINGVELAAEAKRRQPNLKVLYTSGYPKNPIVHNGRLDQGK
                     HLLTKPYTRDDLARAVRSLLDNLQ"
BASE COUNT          428 a          626 c          607 g          470 t
ORIGIN      
        1 accaaaaatt tgcggctatg cagagggtgg atgttcatct gcccaccatc gatggacgct
       61 acctcatcct gctacgctac acgcaacctg atcaggatca gcgcctcctt ttatcccaga
      121 tgaagatgga gttgcctaaa cagccactcc ccaaaatcac ctcgaatgcc actcttaccg
      181 cctaacccag aaatcaagct tgtagtgccg acctttgaag aggcgtgatc gcaaaatcaa
      241 taacttaccg atttttttga cctcgagttg cggaagtcgg gttatgatgt cgagacccag
      301 gtggctcagt aacgatttgt cacatcgtct ctggaagaaa acccgttaga tctcagtcat
      361 tgcaggttat ctaggaggct gcgtacggca cgggcgaggt cgtctcgcgt gtagggcttg
      421 gtcagcaggt gtttgccctg gtcgagtctg ccgttgtgga cgatggggtt tttgggatag
      481 cccgaggtgt acaacacctt gaggttgggt tggcgacgtt tggcttcggc cgcgagttcg
      541 accccattga tgataccgga gaggaccaga tcgacgaaca ggagatcgat agtaggttcc
      601 cgttcgagga gacccagggc cgcctgggcc tcggccgctt cgaagacccg ataacccagt
      661 tcggtcagaa aggccaccgc cagctcacgc acgtccgcct cgtcctcgac cacgagaatg
      721 gtctcgccgc tccttgcatg ctggacctca aacgcatgcc ttcgcaccac cggtttcgcc
      781 acactcttcg acctcggcag gtacagcttg acggtagtgc cttgcccgag ctcactgtag
      841 atcttgacat gcccacagga ttgcttgatg aaaccataga tcatggaaag cccgagaccg
      901 gtgccctcgc cggcggcctt ggtcgtgaag aacggctcga aagctcgctt gaccgtctcc
      961 gcggacatcc ctgtcccgga gtcactcacc gcgagcatga cgtattctcc cggggttatt
     1021 tcggcttcat gcgccggata cgctgcatcg aggaccacat tgccggtctc gatggtgagc
     1081 ttgccaccgc ggtgcatggc atcacgggca ttgaccgcga tgttgagtaa cgcggtctct
     1141 aactgcgcgg gatcggcaag cgccggccac agggcggtgg cctctaccgt tgcgatctcg
     1201 acgttttccg ccagggtccg gtgcaagagt ggtatcatgc ccgcgacgat ctcattcagg
     1261 ttgacgactt ggggttgcag ggcctgccgg cgggagaaag cgagcagccg cctcaccagc
     1321 tctgcgccgc ggccggccgc cttacgggct gactgcacga gcttccgtgg caagggatcg
     1381 ttcccgaggc tgtcctcgag catctggagg ttcccactga tgatggtgag gagattattg
     1441 aaatcgtgcg cgagaccgcc cgtcagttgt cccacagctt ccatcttctg agcatggaga
     1501 agggcctcct ctgcccgctt ctgctcggtg atgtcgcggg caatctcgga ggcgccaatg
     1561 atctttcccg tggtttccat gaccggcgaa atcgacaaag agacatcaat caaccgacca
     1621 tcttttcgga tccgcacagt ttcataatgt tcgctgcact cgccgcgttt gagtcgttcg
     1681 aggatctgca gctcctcgtt cggataaccg ggcggaatca ggatggagat tggctgcccc
     1741 aagacctcgg aagccttgta gccaaagatc ttctcagcgc ctgagttcca actggtgatg
     1801 atcccctcta aggtcttgcc aatgatggcg tcatccgagg attccacaat cgctgctaat
     1861 tggtctcgcg atgcttctgc ctgcttgcgc tcggtgatat cgatggcccc tccgatataa
     1921 ccgacaaagg tgccctccgg caaataacgc gggaccacgc tgtccaggag ccagcggtaa
     1981 accatgtcat ggcgtttcat ccgatactct atccgcaaga gttgatgcat gtcgaacgct
     2041 gtggcgtagg cgcgtaggca gcggtcgaga tcctccggat ggacatcctg tagccaagga
     2101 tagcctcgct cctgctccag ggagcggccg g
//
LOCUS       DASQSL010000484         3745 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_140995, whole genome shotgun sequence.
ACCESSION   DASQSL010000484 DASQSL010000000
VERSION     DASQSL010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3745
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140995"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..194
                     /locus_tag="VE844_04860"
     CDS             <1..194
                     /locus_tag="VE844_04860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00700.1"
                     /translation="EAIEACNFHYDKVLVPVTISCGVAEFHPEDTPESVLRRAEESLH
                     LAKDSGKNRCCGEVELAAA"
     gene            complement(223..1185)
                     /locus_tag="VE844_04865"
     CDS             complement(223..1185)
                     /locus_tag="VE844_04865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004513546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH:quinone reductase"
                     /protein_id="HZC00701.1"
                     /translation="MKAIQVHKLGDPEVMQLEELPDPEPGSREVVVCVKAIGVNPVDT
                     YIRAGIHGYHPELPYTPGTDAAGVVKAIGEGVRKVTVGRRVYIAGSVSGTYAEQALCK
                     ESRVYPLPEHLSFAQGAAVGVPYATAWQALFRRARAEPGDWILVHGASGGVGIAAVQL
                     ASASGMRVIGTVGTAQGRQLVADQGATHVLDHRDPDHFNELLALTDGRGVDVIVEMLA
                     NINLGKDLTVLAHGGRVVVVGSRGTIEINPRDTMSREAHILGMSLMNATDRDRFRIHA
                     ALAAGLANGTLRPVIQAEIPLSEAVRAHCEVIERGSSGKIVLVP"
     gene            complement(1248..1853)
                     /locus_tag="VE844_04870"
     CDS             complement(1248..1853)
                     /locus_tag="VE844_04870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013032815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00702.1"
                     /translation="MHTTNLLVSALLLIMVGFQGGAEQLSSGTQEPKATPQQDQQADD
                     AAMAQWRSYRGEEGDWVAQELAKHKVVTPTDNSDLIGKGQGSVYGAITSQDVKIWERE
                     TYKLAVEGSRIFHSADRLKSDIAVSCDMCHPDGSNNHPETYPKFQVQLGRVALLRDMI
                     NWCIEHPVRGKKLEPDSPEMRALEAYLYAQRKGVALQYGKR"
     gene            complement(1893..3017)
                     /locus_tag="VE844_04875"
     CDS             complement(1893..3017)
                     /locus_tag="VE844_04875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013032816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HZC00703.1"
                     /translation="MKRPSFKSVETKYYEEREALFRGLKNLDRRTFLKLSLAAAAAAA
                     AKGVGFNFHSFQPVRIAHAGVKPAEFTFAYISDSHLYKRELNDRFVRQLLRAVDDINN
                     LDPQPDFVLYGGDLAQLGEPLELELGAQILKNLKAPVKMMVGEHDWFLDMGEKWRTLF
                     GEPIYSFDHKGVHCVVLNSVIEDDFWTARGLSPKERMQTVAGLDNGVQSRFKVGAEQC
                     GWLEKDLQPYSNDTPIIVFSHSPLYKYYRPWNFWTDDAEAVQGILGRFNKVVVVHGHT
                     HQLLTNRIGNIHFHGMLSTAWPWPYAPQGLPALTVQMNRADPFDPNDALGDGSVRVHP
                     EGFVDKLYNLWNRNPVQVASAYLTSDGKLAVPPKPNLQSY"
     gene            complement(3036..>3745)
                     /locus_tag="VE844_04880"
     CDS             complement(3036..>3745)
                     /locus_tag="VE844_04880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013032817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HZC00704.1"
                     /translation="AFQRTFVFLNAPFDRFLAGEEGALSEEAKRGWAIFNGKGRCMSC
                     HQMNPSNPIGTNNRFHNIGVAARAQNFEALAWQALRALEKEALEKGDGIKAVDRLALE
                     TDLSELGRFMVTKDRADIGAFKTMQLRNVGITAPYMHDGSMETLWDVMDHYNKGGEPN
                     PFLDGGIEPLALSEDEIDAVVELMFTLTDERFAEQNKKAFEAQQRLAQTKRPLRDTDM
                     AERKVLPFERRVMGETK"
BASE COUNT          768 a         1100 c         1010 g          867 t
ORIGIN      
        1 gggaggcgat cgaggcttgc aattttcatt acgataaagt acttgtgcct gtcaccatct
       61 cgtgtggggt ggctgagttc catccagagg acacccccga gagtgttttg aggcgagcag
      121 aggagtctct tcacttagcc aaggactctg gaaagaatcg ttgctgtggt gaggtcgagc
      181 tggccgccgc ttagaagggc aatgagtggt gctacacttt tgctatggca ccaagacgat
      241 cttgcctgaa gaaccccgtt caatgacttc acaatgagcg cgaactgctt ctgagagcgg
      301 gatctctgct tgtatcaccg gccgtagagt gccatttgca agacctgcgg caagcgccgc
      361 atggatccga aatctatccc tatctgttgc attcatcaat gacatcccaa ggatatgggc
      421 ttcccggctc atagtgtcgc gtggattaat ctctattgtg ccacggctgc caactacaac
      481 cacccgccca ccgtgtgcca gcaccgtcaa gtccttaccg agattgatat tggccagcat
      541 ttccacgatc acatcgaccc cacggccatc ggtcagggca agtagctcgt tgaaatgatc
      601 cggatcgcga tggtcgagca catgggtggc gccctgatcg gccaccagct gccgtccttg
      661 cgctgtcccc accgtgccga tcaccctcat cccgctagcc gaggcaagct gcactgccgc
      721 gatccccacc ccgccgctgg cgccatggac caagatccag tcgcctggct cagctcttgc
      781 tcgccgaaat agtgcctgcc aggcggtggc ataggggacc cctaccgctg cgccttgggc
      841 gaatgaaagg tgttcaggca atggatagac tcgcgactct ttgcataatg cttgctcggc
      901 atacgtaccg ctaacagatc cggctatata gacccgcctg cccactgtta ccttgcgcac
      961 accctcgcct atcgccttca caacacccgc agcgtccgtg cccggggtgt agggaagctc
     1021 tggatgatag ccgtggatcc cggcacgtat ataagtatcg accggattga ctccaatggc
     1081 cttgacacac accacgacct ctctagagcc tggctctgga tccggcaact cctcaagctg
     1141 catgacttct ggatcaccca gtttatggac ctgtattgct ttcacatctt aatagccgct
     1201 tgcctgagct ggtgttatcc tctcccacga gggggctgtc catcatgcta ccttttgccg
     1261 tattgcagag ccacaccctt gcgttgcgca tagaggtagg cttctagggc gcgcatctca
     1321 ggggaatcgg gctcgagctt tttaccgcgc actgggtgct cgatacacca gttgatcata
     1381 tcccgcaaca gcgccacccg gcctaactgt acctgaaatt ttggataggt ctcaggatga
     1441 ttattagacc catcgggatg gcacatatca caggaaactg cgatatcgct ctttaaccga
     1501 tccgcgctgt gaaagatacg cgagccctcc acggccaatt tgtacgtttc tcgttcccag
     1561 atcttcacgt cctgcgaggt gatcgcaccg tagacagatc cctggccctt gccgatcaga
     1621 tcactgttgt cagtgggggt cactaccttg tgcttggcca gctcttgggc gacccagtca
     1681 ccctcctcac ctcgatagct cctccattga gccatcgccg catcgtcggc ctgctggtct
     1741 tgctgagggg ttgccttggg ttcttgagtg ccactgctca actgttccgc acccccctgg
     1801 aagccgacca tgatcaatag tagggcagaa acaagaaggt tagttgtgtg catgttttta
     1861 tcctccctca gtcaaagagt tcagtaaacg ggttagtagc tttggagatt aggcttgggc
     1921 ggcacggcca gcttgccatc gctcgtcaaa taggcgcttg cgacctggac cgggttgcgg
     1981 ttccacaggt tgtaaagctt gtctacaaag ccctcgggat ggacacggac ggatccatcc
     2041 cccagcgcat cgttaggatc aaagggatcg gcccggttca tctgcactgt caaggcaggg
     2101 agcccctgtg gtgcataagg ccatggccag gcggttgaga gcatgccgtg gaagtggata
     2161 ttgccgatac ggttggtgag caactggtgg gtatggccgt gtactaccac cactttgtta
     2221 aagcggccca ggatgccctg tactgcctcg gcatcgtcgg tccagaagtt ccagggacga
     2281 tagtatttat agagcggaga gtgcgaaaat acaatgatcg gggtgtcgtt ggaatagggt
     2341 tggagatcct tctcaagcca gccacactgc tctgccccga ccttgaagcg actctggacg
     2401 ccgttgtcga gccctgctac ggtctgcatc cgctcctttg gcgacaggcc acgcgccgtc
     2461 cagaagtcat cctctatcac actgttgagc acaacacagt ggacgccttt gtgatcgaag
     2521 gagtaaatgg gttccccgaa cagcgtgcgc cacttctcac ccatgtccag aaaccagtca
     2581 tgctcgccca ccatcatctt gaccggtgcc ttgaggttct tcaggatctg agcaccgagc
     2641 tcaagctcca ggggctcccc caattgggcg agatcacccc catagagcac gaagtccggc
     2701 tgcggatcca ggttattgat atcgtctaca gcgcgcagca actggcggac aaaacggtcg
     2761 ttgagctcgc gtttatacag atgcgagtcg gagatatagg caaacgtgaa ctctgcgggt
     2821 ttcacgccgg catgggcgat ccgcactggc tggaagctgt ggaagttgaa ccccacgcct
     2881 ttggcagccg cggcggcggc ggcggcgaga gagagtttaa gaaaggtccg gcggtcgagg
     2941 ttttttaagc cgcggaacaa cgcctcgcgc tcttcatagt atttggtctc cacactctta
     3001 aagcttggtc gtttcattga cttgtgcctc cacacttatt tggtttcacc catgacccgc
     3061 cgctcgaacg gtaacacctt gcgctcggcc atatctgtat cgcgcaaggg gcgcttggtt
     3121 tgagcgagcc tttgttgtgc ctcgaaggcc ttcttgtttt gctctgcaaa gcgctcatcg
     3181 gtcagggtaa acatgagctc gactacggca tcgatctcat cttcgctcaa ggccaatggt
     3241 tcgatgccac cgtccagaaa tggattcggc tcgccgccct tattatagtg gtccataaca
     3301 tcccacaggg tctccattga gccatcatgc atgtacgggg ctgttatccc cacattgcgc
     3361 agttgcatgg tcttaaaggc accgatgtcg gcgcggtcct tggtcaccat gaaccggccc
     3421 aactcagata aatcggtctc caatgccagc cggtccactg ccttgatgcc atctcctttc
     3481 tccagggctt ctttctccag ggccctaagc gcctgccagg ccagtgcttc gaaattttgc
     3541 gcacgcgcgg ccaccccaat attgtgaaat cggttgttag tgccaatggg gttcgatgga
     3601 ttcatctggt ggcagctcat acaacgcccc ttgccgttga agatggccca gccgcgtttt
     3661 gcctcttcag agagggcacc ctcctcgccg gccaggaacc gatcgaaagg cgcgttgagg
     3721 aatacaaacg tgcgctggaa ggcag
//
LOCUS       DASQSL010000485         5314 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_166703, whole genome shotgun sequence.
ACCESSION   DASQSL010000485 DASQSL010000000
VERSION     DASQSL010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 5314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5314
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166703"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3064)
                     /gene="gltB"
                     /locus_tag="VE844_04885"
     CDS             complement(<1..3064)
                     /gene="gltB"
                     /locus_tag="VE844_04885"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012282066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HZC00705.1"
                     /translation="MIKYVGHAAEGLYDPAYEHEACGVGFVVDMKGRKSHTIVTQALI
                     ILKNLLHRGACGCEENTGDGVGILIQMPHAFLARECARLGIELPAPGHYGAGVVFLPR
                     EPAEARHCQKVFETIIREEGQRVLGWREVPTDDSLLGPTARSAEPSFKQIVIGCGPHL
                     DEAAFERRLYVIRKRVEHAIRNSTLTERDLFYIPSLSAKTLLYKGMLTGNQIEAMFPD
                     IVDPAVESALALVHQRFSTNTFPSWPLAHPFRYIAHNGEINTLRGNINWMRAREALCK
                     SPLFGEDLKKIFPIVYEDGSDSACFDNVLEFLHMAGRPLPLAVLMMIPEAWSGHEFMS
                     DERKAFYEYHGSLMEPWDGPASIAFTDGTVIGAVLDRNGLRPSRYYVTKDGLVVMASE
                     VGVLDIPPENILLKERLHPGRIFLVDTREGRIIDDAELKAAFAREHPYREWLKQNLIP
                     LHDLPEPPHVHEPDHATVLRRQQVFGYTHEDLRFLLAPMAQTVEEPVGSMGTDTALAV
                     LSNRPRLLYDYFKQLFAQVTNPPLDGIREELVTQIETPLGPEGNLLHPTAANCRQIKL
                     KTPILDNKELARLRYMDLPGFRSITIPILFPVAEGGPGLERTLEEVCRKASQAIAEGY
                     TYIILSDRGVDQHLAPIPALLATAGVHHHLVRTGARTKVGLVVETGEAREVHHMALLI
                     GFGAGAINPYLAFETLDDLIRQEILNGIDHPTAVKHYIKALNKGVLKVISKMGISTIQ
                     SYRGAQIFEAIGLDKPFIDRYFTWTASRIGGIGLEVIAEEASLRHHHAYPERPVGKPE
                     LDWGGEYQWRRDGEYHLFNPETVAKLQHSTRSRQYQIFKEYTRGVDEQNVQRATLRGL
                     FEFKFAREPLPLAEVEPVESIVRRFATGAMSYGSISQEAHETLAIAMNRLGGKSNTGE
                     GGEDPARYHPDANGDSRRSAVKQVASGRFGVTSEYLVNADDLQIKMAQGAKPGEGGQL
                     PGPKVYPWIAKVRHSTPGVGLISPPPHHDIYSIEDLAQLIHDLKNSNPQ"
     gene            3171..>5314
                     /locus_tag="VE844_04890"
     CDS             3171..>5314
                     /locus_tag="VE844_04890"
                     /inference="COORDINATES: protein motif:HMM:NF013761.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HZC00706.1"
                     /translation="MPVLSATEYAIEEKVMERGYRLMAEAQRRARSWRDLHHWRDRFL
                     DRLMQDERFRVQALRFVDVLPMLEDDRALVWHLYDYFGEEGFPLTGLIKFGARHIHGK
                     RTNALIARAVRKGVETLARRFMGGANAREALTSARKLYDRGIGFSLDLFGEACVSETE
                     AKRYQQSYAQILNDLPAQLANWPPLRNRRNGWPERRLNLSLKLSSLYSQINPLDPEGS
                     IEGIAGRLRPLLAIARKRNAFVCIDMEHYELQAITLAGFKRLLMEPEWRDWPDVGLAL
                     QAYLKQTETDLQGLIEWVKTRGTPITVRLVRGAYWDRETVIARSRCWPMPVWESKTQT
                     DICYERCMRLLFEHHPHIKAAFGTHNVRSIALAMILAEEYGLVKDQFELQMLYGMAPS
                     LEDLIPEMGYLLRVYVPFGELLPGMAYLVRRLLENSSSQSFQRMSVSQRSAPDELLAS
                     PALKPQDSPSPPSSSEGRASTPEFANEPLHRFTDQAERSRFQEAIEHARGNLGVVYPL
                     LIDGKGIDTGDYLISVNPARPEEVVGRVARADQAQADQAVAGALRAFAAWAALSMAER
                     AEFLFRAAALLRSRRDGFAAFEIFEAGKTWSEADANVAEAIDYLEYYGRQAMHLGRPR
                     AKNMPGETNLHLYRPRGVGLIVPPWNFPLAITTGMLSAALVTGNTVILKPSSQTPVIA
                     ARFVALLQEAGLPPGVVQFLPGAGGTIGEYLV"
BASE COUNT         1068 a         1569 c         1591 g         1086 t
ORIGIN      
        1 cctggggatt ggaattcttc agatcatgga tcaactgtgc cagatcctcg atggaataga
       61 tatcgtggtg gggcggtggg gagatcagcc ccacccccgg ggtggaatga cggaccttgg
      121 cgatccaggg ataaactttg gggccgggga gctgaccgcc ttcgccgggt tttgccccct
      181 gggccatctt gatctgcaga tcatcggcat tgaccaggta ctcgctggtc accccaaagc
      241 gccctgaagc aacttgttta accgcgctgc ggcgagagtc accgttggca tcggggtggt
      301 agcgggccgg gtcctctccc ccttcaccgg tattcgattt gccacccagc cgattcatcg
      361 caatggccaa tgtctcatgc gcctcctgac tgatcgagcc atacgacatg gccccggtcg
      421 cgaatcgcct aacaatagac tccaccggct ccacttccgc aagcgggagt ggctctcgag
      481 caaacttgaa ctcgaacaag ccccgtaagg tggcccgctg cacgttttgc tcatcgaccc
      541 cccgggtgta ttccttgaaa atttggtact gacgggagcg ggtggaatgc tggagcttgg
      601 cgaccgtttc cgggttgaac aggtgatatt cgccatcgcg ccgccactga tactccccgc
      661 cccagtccag ttccggtttg cccaccggcc gctcggggta ggcatgatga tggcgcaggc
      721 tcgcttcttc tgcgataacc tcaaggccaa taccgccgat gcgcgaggca gtccaggtga
      781 aatacctgtc gataaagggc ttatcgagcc cgatggcctc gaagatctga gcaccccgat
      841 aggactggat ggtggagatc cccatcttgg agatgacctt gagcacccct ttatttaagg
      901 ccttgatgta gtgctttacg gccgtggggt gatcgatgcc gtttaggatc tcctgacgga
      961 tcagatcgtc caaggtctca aaggcgagat aagggttaat ggcgcctgca ccaaagccga
     1021 taaggagcgc catgtgatgc acttctctcg cctcgccggt ctcaaccacc agccccacct
     1081 tggtgcgcgc gcccgtgcgc accaggtgat gatgaacgcc ggcggtggcc agcaaggccg
     1141 ggatgggggc gagatgctga tcgacacccc ggtctgagag gatgatatag gtgtaacctt
     1201 cggcgatcgc ctggctcgct tttctgcaca cctcctcaag ggtacgttcg agcccaggcc
     1261 cgccctcggc cacgggaaaa agaataggga tcgtgatact gcggaaaccc ggcagatcca
     1321 tataccggag ccgcgccagc tccttattat cgaggatcgg ggtcttgagc ttgatctggc
     1381 ggcaattcgc cgcagtcgga tgcaatagat tcccttccgg acccaggggc gtctcgatct
     1441 gagtcaccaa ctcctcgcgg atcccatcga gcggcggatt ggtcacctgc gcaaagagct
     1501 gtttgaaata gtcatagagc agccgagggc ggttcgatag caccgcgagc gccgtatccg
     1561 tgcccatcga gccaaccggc tcctcgaccg tttgcgccat gggtgcgagc aaaaaccgca
     1621 ggtcctcatg ggtatagccg aacacctgtt gtcttctcag cacggtggcg tgatcgggct
     1681 cgtgcacatg gggaggctcg ggcagatcgt gaagtggaat cagattttgc ttaagccact
     1741 cccgataagg gtgttcgcgg gcgaaggcgg ccttgagctc cgcatcatcg atgatgcggc
     1801 cctctcgggt atcgaccaga aagatccggc caggatgcag gcgttctttg agcaggatat
     1861 tctccggtgg gatatccagc accccgacct ccgaggccat gaccacgagc ccatccttgg
     1921 tcacgtaata gcgcgaggga cgcaggccgt tgcggtccag gaccgcgccg atgaccgtgc
     1981 catcggtgaa ggcgatggag gctggcccat cccacggttc catcagacta ccatggtatt
     2041 cgtagaaggc cttgcgttca tcgctcatga attcgtgccc gctccaggcc tcggggatca
     2101 tcatgagcac ggcgagcggc aaaggacggc ccgccatatg caggaactcc aggacgttgt
     2161 cgaagcaggc cgaatcactg ccgtcttcgt agacgatcgg aaagatcttc ttgagatcct
     2221 cgccaaagag cggtgatttg cacaaggcct cccgcgcgcg catccagttg atattgccgc
     2281 gtaaggtgtt gatctcgcca ttgtgggcga tgtaacggaa gggatgtgcg agcggccagg
     2341 atgggaaggt attggtcgag aaccgctgat ggacgagggc gagcgccgat tccacggccg
     2401 gatcgacgat gtcgggaaac atcgcctcaa tctgattgcc ggtgagcatg cccttgtaga
     2461 gcaaggtctt ggcagagagg cttgggatat aaaagagatc gcgctcggtg agcgtcgagt
     2521 tgcggatagc gtgctctacc cgcttgcgga tcacatagag cctgcgttca aaggccgcct
     2581 cgtccagatg aggtccacag ccgataacga tctgtttaaa gctcggctcg gcagaacgtg
     2641 cggtcggccc gagcaaggaa tcatcggtcg gcacctcccg ccagcccagc acccgctgcc
     2701 cttcttcccg aataatagtc tcaaagacct tctggcaatg ccgagcctcg gcgggttcac
     2761 gcggcaggaa caccacgccc gccccatagt gcccaggggc aggcaattca atgccaagtc
     2821 ttgcgcattc acgggccagg aaggcgtgcg gcatctggat caggatcccc accccatctc
     2881 ccgtattctc ctcgcagcca caggctccgc ggtgcagcag atttttaagg atgataaggg
     2941 cctgggtaac aatggtatgt gacttgcgcc ccttcatatc gaccacgaag cctacgccac
     3001 aggcctcgtg ttcataggca gggtcataaa gaccttctgc agcatgccct acatacttta
     3061 tcatcgactc accccacact caggcataaa atggtgccat taaaaaatat ttagagaata
     3121 ggcaagtata tcgtcggctt tcgcacgtgt cacggataga gtatctccgt atgcctgtat
     3181 tatcagcgac tgaatatgcg atcgaggaaa aggtcatgga gcgcggctac cgtctcatgg
     3241 cggaagccca aaggcgcgcc cggtcctggc gtgatctcca tcactggcgg gaccggttcc
     3301 ttgaccggct gatgcaggac gagcgttttc gcgtccaagc gctccggttc gtcgatgtcc
     3361 tgccgatgct cgaagatgat cgcgcgctgg tctggcatct ctacgactac ttcggcgagg
     3421 agggattccc gctgaccggg cttattaagt tcggcgcgcg gcatattcac gggaagagga
     3481 ccaacgcgct gatcgccagg gcggtgcgca agggtgtaga aacgctggcc aggcgcttca
     3541 tgggtggggc caatgctaga gaggccttga caagcgcgcg caagctctac gaccgaggca
     3601 tcggcttcag cctggatctg ttcggggagg cctgcgtcag tgagacggag gctaagcgct
     3661 atcaacagag ctacgctcag atcctaaacg atctgcccgc ccagcttgca aactggccgc
     3721 cccttaggaa ccggcgcaac ggctggccgg agcggcgtct taacctctcg ctcaagcttt
     3781 cttccctgta ttcccagatc aaccccctcg atcccgaggg cagcattgaa ggcattgccg
     3841 ggcggttgcg gccgctcctt gcgatcgcgc gcaagaggaa cgcctttgtc tgcatcgata
     3901 tggagcacta tgagttgcag gcgatcaccc tcgccggttt caagcgtttg ttgatggaac
     3961 ccgaatggcg cgattggccg gatgtcggat tggcccttca agcctaccta aaacagacag
     4021 aaaccgatct tcaaggactc atcgagtggg taaaaacacg cggcacgccg atcacagtga
     4081 ggctcgtgcg cggcgcctac tgggatcggg agacggtcat cgcccgctcg aggtgttggc
     4141 ctatgccggt atgggagagc aagacgcaaa ctgatatctg ctatgagcgc tgcatgcgtc
     4201 tcttatttga acatcacccg cacatcaagg cggccttcgg tacccacaat gtccgcagta
     4261 ttgcgcttgc tatgatactg gccgaagagt atggattggt aaaagatcag ttcgagttgc
     4321 agatgctcta tgggatggcg ccttccttgg aagatttgat cccggagatg ggttatctac
     4381 tgcgggtcta tgtaccgttt ggcgagttgc tccccggcat ggcttatctg gtccgccggc
     4441 tgctcgagaa ttcatcgagc cagtcgtttc agcgcatgag tgtaagccag cggagcgctc
     4501 cagatgagct gctggcatcg cctgcgctca aaccccagga ttcaccttcc ccgccgtcct
     4561 cctcggaagg gcgggcatcc acccccgaat ttgccaacga accgctccat cgctttactg
     4621 accaggcgga gcgaagtcgc ttccaagagg cgattgaaca cgcgcgggga aacttggggg
     4681 tggtttatcc tttgctcatc gatggcaagg gtatcgatac cggcgattat ctcatctcgg
     4741 tgaatcctgc ccgtcccgaa gaggtcgtcg ggcgggtggc aagggccgat caagcccagg
     4801 ccgaccaagc cgtcgccggg gccttacgcg cctttgccgc gtgggcggcc ttgtcgatgg
     4861 ccgagcgcgc ggaatttttg ttccgcgcgg ctgccctcct ccgtagccgc cgggacgggt
     4921 ttgccgcctt tgagatcttc gaggccggca agacctggag cgaggccgac gccaacgtcg
     4981 ccgaggccat tgattatctg gaatactacg ggcggcaggc gatgcacctc ggccggccga
     5041 gagctaaaaa tatgcctggc gagaccaacc ttcacctcta tcgcccccgc ggtgtcgggc
     5101 ttatcgtacc gccctggaat tttccgctcg cgattacgac cggcatgctt tcagccgccc
     5161 tcgtcaccgg caacacggtg attctcaaac cctcctcgca gacaccggtc atcgccgcac
     5221 gctttgtggc gctgctccaa gaggcagggt tgcctcccgg cgtggtccag ttcctgccgg
     5281 gggccggggg cacgatcggc gagtatctgg tgca
//
LOCUS       DASQSL010000486         1123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_84370, whole genome shotgun sequence.
ACCESSION   DASQSL010000486 DASQSL010000000
VERSION     DASQSL010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84370"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..304
                     /locus_tag="VE844_04895"
     CDS             <1..304
                     /locus_tag="VE844_04895"
                     /EC_number="4.3.2.3"
                     /inference="COORDINATES: protein motif:HMM:NF016040.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050385 - ureidoglycolate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0000256 - allantoin catabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ureidoglycolate lyase"
                     /protein_id="HZC00707.1"
                     /translation="HLNRHIKSTQALIPLGGKACLVVVAPPTVNLDSPEDLTQVKAFI
                     NDGSCGVNIDLGTWHMAPLPLGPEVSLVNIQGERAGEDTEERSFEEKFDTVLEVIL"
     gene            342..>1123
                     /locus_tag="VE844_04900"
     CDS             342..>1123
                     /locus_tag="VE844_04900"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZC00708.1"
                     /translation="MRWITTLYGRRPDFQVFAALTLACMLVLGLGLMPSTHAPAHAGE
                     QPQKGGTVIWAVHESMPGFDMHYDTTYILAQPVAPIYNGLVTQDPYNNGKIIGDLAER
                     WEITEEGKRITFFLHKGVKFHDGSPFSCADAQYTMDKLADRKRTGPAFVSVVEEVYEA
                     SSCADDFTLVVSLKRPSAALLTLLSGAHMAMMKKGLAEAVDRKDTKFLIGTGPFKFKS
                     YNPGVDFQAERNPNYWKPGLPHLDGYRAVVMSDLTKIFASFRA"
BASE COUNT          242 a          330 c          318 g          233 t
ORIGIN      
        1 ccatctgaac cggcacatta agagcacaca ggcgctcatc cctctgggcg gtaaagcctg
       61 cctcgtggtg gtcgcgcccc ccacagtcaa tctcgacagc ccggaagacc tcacacaggt
      121 gaaagccttc atcaatgacg ggagttgtgg ggtcaacatc gatctcggca cctggcatat
      181 ggcccctctc cccttgggcc cagaggtcag cctggtgaat attcagggag aacgtgccgg
      241 cgaggataca gaggagcgtt catttgaaga gaagttcgac acggtgcttg aggttatcct
      301 gtaagaccat cacggaagat cgacttgaaa ggagatgcat tttgcgctgg atcaccaccc
      361 tttatggtag acggccggat ttccaggtct tcgctgccct taccctcgcc tgcatgctgg
      421 tgttggggct ggggctcatg ccgtcgacgc atgcccctgc gcacgccggt gagcaacccc
      481 agaagggggg caccgtcatc tgggccgtgc atgaaagtat gccaggcttc gacatgcatt
      541 atgacaccac ctacatcctg gcgcagccgg ttgccccgat atacaacggg ttggtcacgc
      601 aggacccgta caataacgga aaaatcatcg gtgatctggc tgaacgttgg gagatcacag
      661 aagagggcaa gcgcatcacg ttcttcctcc acaaaggcgt gaaatttcac gacgggtcgc
      721 ccttctcctg cgctgatgca caatacacta tggacaagct ggcagaccgt aaacggacgg
      781 gtccggcctt tgtctcggtg gtcgaagaag tctatgaggc ctcgtcatgc gccgatgatt
      841 tcaccttggt cgtgtccctc aagcgtccgt ccgccgccct gctgacactg ctgtcggggg
      901 ctcacatggc tatgatgaag aaggggctcg ccgaggcagt agaccgtaaa gatacgaagt
      961 ttctcattgg caccggccct ttcaagttca agtcgtacaa cccgggggtg gatttccaag
     1021 cggagcgcaa ccccaactac tggaagcctg gcctgcccca cctcgatggc taccgtgcag
     1081 tggtcatgtc ggatttgacc aagatcttcg cctccttccg cgc
//
LOCUS       DASQSL010000487         1795 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_44974, whole genome shotgun sequence.
ACCESSION   DASQSL010000487 DASQSL010000000
VERSION     DASQSL010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1795
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44974"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..273
                     /locus_tag="VE844_04905"
     CDS             <1..273
                     /locus_tag="VE844_04905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00709.1"
                     /translation="ACESFRYYILRLLESEMVLDGLFIDDFKGSPQVCDRTFGNLLRS
                     HQCFADRQTDWKFCHKYGFEPNDRQSYPPFDEKLRTKQACINTVYC"
     gene            332..1270
                     /locus_tag="VE844_04910"
     CDS             332..1270
                     /locus_tag="VE844_04910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020558428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HZC00710.1"
                     /translation="MTGVLVVAWALVTQPLLPRAPKAATVNIDPARLEVHVRMLSDTL
                     VPRDESHPHMLDRAAAYVRREFEQAGGTVSEQPYDVDGKTYRNVIALFGPDTAERIVV
                     GAHYDSVAADVPAADDNASGVAGLIELAYWLGATSPRMQIELVAYTLEEGQHFRTQRM
                     GSFVHARSLKQQGVPVRAMFSLEMLGFFSDAPNSQRHPYPLMELFYPTQGNFIAVVGK
                     LNQPMVVRRVKAAMQAASLLPVYSINAPRSVPGIDFSDHRNYWEVGYDAVMITDTAFY
                     RNPNYHTPRDTAETLDYQRMAGVVQGVYAAVLALAQ"
     gene            1665..>1795
                     /locus_tag="VE844_04915"
     CDS             1665..>1795
                     /locus_tag="VE844_04915"
                     /inference="COORDINATES: protein motif:HMM:NF012464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZC00711.1"
                     /translation="MTIYAYLRVSTDKQDVDNQRHRLLGYANNHKLVPLEFREDTASG
                     "
BASE COUNT          389 a          504 c          478 g          424 t
ORIGIN      
        1 gcatgcgaga gttttagata ctatatcctc cgtttgcttg aatctgagat ggtgctcgac
       61 ggcttgttta ttgatgattt caaaggatca ccacaagtct gtgacagaac ttttggcaac
      121 ctacttagaa gccatcagtg ctttgctgac agacaaaccg actggaaatt ctgtcataag
      181 tacggcttcg agccgaatga ccggcagagt tatccgccgt tcgacgagaa gctgcgaact
      241 aagcaggcct gcataaacac ggtgtactgt tgagtgccgc gatgctatgc gcaggcgatt
      301 gggttctagc ttgttactga gcttcctcgt tgtgaccggc gtgctggtcg ttgcctgggc
      361 gctggtgacg cagccgctat tgccgcgcgc gccgaaagct gcaaccgtca atatcgatcc
      421 tgccagactg gaagtacacg tacggatgtt gtccgacacg ctggtgccgc gagacgagag
      481 tcacccacac atgctggatc gcgctgctgc atacgttcgc cgcgaatttg aacaggcggg
      541 cggcacggtt tccgagcagc cctacgatgt ggatggaaag acctaccgca acgtcatcgc
      601 gctattcgga ccggataccg ccgaacgcat cgtggtcggc gcgcactacg actctgtggc
      661 tgcagacgtg cccgccgccg acgacaatgc tagcggtgtc gccgggctca tcgaactcgc
      721 ctattggctg ggcgcgacat cgccacgcat gcagatagaa ctcgtcgcgt acaccctgga
      781 agaggggcag cattttcgca cgcagcgtat gggaagcttt gtgcacgcgc gttcgctcaa
      841 acagcaaggt gttccagtgc gcgcaatgtt ctcgctggaa atgctgggct ttttttctga
      901 cgcgcccaat agccagcgtc atccgtatcc gctaatggaa ctcttctatc ccacgcaagg
      961 taatttcatc gccgtggtcg gcaagctgaa tcagcctatg gtcgtgcgac gcgtgaaggc
     1021 ggccatgcaa gctgcctctc tgctgccggt gtactccatc aatgccccgc gctcggtgcc
     1081 ggggatcgac ttctcggatc atcgcaacta ctgggaagtg ggttacgacg cggtgatgat
     1141 caccgacacg gcgttctacc ggaacccgaa ctatcacacc cccagagaca cagcggagac
     1201 gctggactac cagcgcatgg ccggggtggt gcagggtgtg tacgctgcag tgttggccct
     1261 ggcgcagtag catcgctgca cctcctgcca ttgaggcatt gttccacctg acttagagcc
     1321 caggttgacc ttttaatagt aatgggacaa ttatggaaag ctttccataa tttctccgtt
     1381 gctatgaaaa ggccaggtcg cactatttcc tttcttattc ctaattcttt atagcctcgc
     1441 tctgggcagg cgcctgcttc tatcctgacc ccagtccatt cgacgtacct ctcacgcagt
     1501 aaagcagatc tcgaccgctg ttcactcgtg tttcaccccc tcggaggctt ccatctatac
     1561 gaaaaaaacg ttgtttgtac tgtattgata ttcactttta actggcattt atttcggccg
     1621 atatgcatat taataaactc tgtaataaag tttactctgt aaaaatgacg atctacgcct
     1681 atctccgggt ctccaccgac aagcaggatg tcgataacca gcgccacagg cttttggggt
     1741 acgcgaacaa ccacaagctc gtgccgctcg aattccggga ggacaccgca agcgg
//
LOCUS       DASQSL010000488         1093 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_127262, whole genome shotgun sequence.
ACCESSION   DASQSL010000488 DASQSL010000000
VERSION     DASQSL010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1093)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1093)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127262"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(621..>1093)
                     /locus_tag="VE844_04920"
     CDS             complement(621..>1093)
                     /locus_tag="VE844_04920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00712.1"
                     /translation="AFYIQSTLGLLVQVLLALGLVGLYARQSDATGTIGFIGFLMAFV
                     GMFFASGLLWAALLADLGWALFGVSSLRARVYPLVVAILLVIGAVFSGIASFLVGSPG
                     SILMDEGAGAASVFNAVLYVGVGARLVLYAAIAWLGFTLIANRSQAARQPGPAN"
BASE COUNT          244 a          322 c          333 g          194 t
ORIGIN      
        1 aggcaaagcg caccagcgag gtcgacttcc gcaacaacct gtttgtgcct accggtgggg
       61 cgtcgctgag cgtggggccc gatgaccggg atgagctttt tctggggcaa ccgctactga
      121 ggcggtaggg gtgcgctagt cggcatcttc ccgaggctcc agtgctttgc ctcgtctacc
      181 agctctttgg gcaccgaata gcccttccgt acttcgcacc tacgcggtca aactaaagca
      241 acccagagac tcgatcttgt aggcgagcgt acatatgtcc gccgggcgtc cgacatggcg
      301 gtttgcagtg tacttgatct gtatcacatc gttgctgtag caacgcttgc tcggaagagt
      361 tgcgcatacg ttggtgcgtc cgtagcgcgt ctgggtcaac acgcacttag gctgccacaa
      421 gaagcttcct tcacagcgag ctgcgatgac atcgaactgg gtggcttgat ggacgcatga
      481 aggcgtgcct cgcacccaag gcgggagaga tagttgctac tgtcaagcgg ggaggtcaac
      541 agtgcggggc agtaagacca acatcactgc aatccgccgt caagagaagg gttgctcgtc
      601 tgagagacga tcttccaaat tcagttcgca ggcccaggtt ggcgggctgc ttggctcctg
      661 ttcgctataa gcgtgaagcc cagccaggct attgctgcgt aaaggacgag tctggcgccc
      721 acgcccacgt acagcaccgc gttgaagacg cttgcggcgc ccgcgccctc atccatcagg
      781 atgctaccgg ggctgcccac gagaaaactg gcgatcccgg agaacaccgc gccgatgacg
      841 agtaggatgg cgaccacgag cgggtacacc cgagctcgta agctggacac cccaaacaaa
      901 gcccacccca ggtcggcgag caaggctgcc cagaggagcc ctgaggcgaa gaacatgcca
      961 acgaaggcca tcaagaagcc gatgaacccg atagtgccgg tagcgtccga ctggcgggca
     1021 tacagcccga ccagccccaa cgccagcagc acctgaacga ggagtcctag cgtagattga
     1081 atgtagaagg caa
//
LOCUS       DASQSL010000489         1278 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_84376, whole genome shotgun sequence.
ACCESSION   DASQSL010000489 DASQSL010000000
VERSION     DASQSL010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1278
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84376"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..>1278)
                     /gene="proB"
                     /locus_tag="VE844_04925"
     CDS             complement(139..>1278)
                     /gene="proB"
                     /locus_tag="VE844_04925"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015839060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004349 - glutamate 5-kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HZC00713.1"
                     /translation="SRKDLVVGVKRIVVKIGSRVLTSKGEGLDFEVIDDLAEQISNLT
                     RAGKEVLVVSSGAVAAGIKELRLRDLPRAVAQKQAVAAVGQSHLIWAYERAFKQHRQR
                     VAQVLLTHEDLRQRARYLNARNTLLTLIRLGAIPVINENDTVSVEEINFGDNDTLSAM
                     VADLVQADILLILTDIDGLYTADPHTDATAQFLPEIPHITAAVEAMGGLTHHSLARGG
                     TFTKIQAAKKLAVSGIPTIIANGFRPNIVTSLIAGEPLGTLFHPERRLWRGRKRWIVT
                     TLRPRGSLTVDDGAKAAIVSKGKSLLPSGVLSVEGKFEFGDLVRCCDRTGDEFARGLV
                     NYPERDLRLIKGLHTSKIELTLGHKYCDEVIHRDNLVIWHDRETA"
BASE COUNT          276 a          357 c          360 g          285 t
ORIGIN      
        1 ccgcacaagc cccgggatat cgtctactga cacattcccc atgagagcat cccccacgta
       61 ggattttggt atgagacgat cggtgagtcg cgctcacatc acggtaagga tgatcggtac
      121 ggcggaggac acggcggcct atgccgtctc acgatcgtgc caaatcacca gattgtctcg
      181 atgaatcacc tcatcacagt atttgtggcc gagcgtgagc tcgattttcg aggtatgcaa
      241 tcctttaatc agccgtagat ctcgttcagg ataattgacg agcccacgag caaactcatc
      301 ccccgttcga tcgcagcaac gaaccagatc accgaactcg aatttcccct cgacgctgag
      361 gacgcccgac ggcagtaaac tcttgccttt ggaaacgatg gctgctttgg cgccatcatc
      421 cacggtgagt gaccctctag gtcgcagggt cgtgacgatc caacgtttgc gacctcgcca
      481 tagacgtcgc tctggatgaa atagtgtacc aagcggttcg ccagctatca gcgaagttac
      541 gatattcggc cggaatccat tggcgatgat ggttgggatg ccgctcacag cgagcttttt
      601 ggccgcttga atcttcgtga acgtcccgcc acgcgctagg gaatggtggg tcaggcctcc
      661 catggcctca acagccgccg ttatatgtgg gatttccgga agaaactgag ccgtggcgtc
      721 ggtatgtggg tcggcggtgt agaggccatc gatatcggtc aggatcagga ggatatcggc
      781 ttgaacaagg tctgccacca tcgcagacag cgtatcgttg tcgccgaagt tgatctcttc
      841 aactgagacg gtatcgtttt cgttgatgac ggggatcgcc cctaggcgga taagtgtaag
      901 gagggtattg cgcgcattca gatagcgtgc gcgctggcgc agatcctcat gggtaagtaa
      961 cacttgggcg acgcgttgtc ggtgctgttt gaacgcacgc tcataggccc aaatgagatg
     1021 gctctggccg actgctgcca cggcctgctt ctgcgcgacg gcgcgcggta ggtctcgaag
     1081 tctgagttct tttatgccag ccgcaacagc ccctgaagag acaacgagaa cctccttgcc
     1141 cgcgcgcgtg agattggaga tctgttcggc cagatcgtcg atgacctcaa agtcaagccc
     1201 ttctcccttt gaggtgagta cccgactgcc aatcttcaca acgatgcgct taaccccgac
     1261 aacaaggtcc ttccgcga
//
LOCUS       DASQSL010000490         1313 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_4269, whole genome shotgun sequence.
ACCESSION   DASQSL010000490 DASQSL010000000
VERSION     DASQSL010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1313
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4269"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(99..578)
                     /locus_tag="VE844_04930"
     CDS             complement(99..578)
                     /locus_tag="VE844_04930"
                     /inference="COORDINATES: protein motif:HMM:NF024752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC00714.1"
                     /translation="MRPQDPAEQTDCYSGKKKDQTVKNVLLVGAPLTILFLSDTYGGR
                     THDKPIADATPYPLPAGSGLLQDLGFLGFTLPGVDVLMPTKKPRGGELTVEEQLANQE
                     LHQRRLRIEHVNSSVKRCRIVKDRLRLWKKGIRDLVMELCCALHNFRVRLIPWQPMV"
     gene            complement(512..1111)
                     /locus_tag="VE844_04935"
     CDS             complement(512..1111)
                     /locus_tag="VE844_04935"
                     /inference="COORDINATES: protein motif:HMM:NF025000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC00715.1"
                     /translation="MAGVQFSDVQSRPMEFLDLTSLTLDEFEQVVPPFEAAFQAHMAH
                     WRLDGKPRTSRQFSVYKNCPLPTPEDRLFFLLTHLKTYSLQVVQGRLFGMGQSKANQW
                     IHVLLPALQAALRSLGDSPARSLSALAQRLGVSEADAVSLVESLEEAPPPVESISSPD
                     VAGEVSPLLPMTAPRDASCAPKTLLNRPIVIAARKKTRR"
BASE COUNT          287 a          378 c          387 g          261 t
ORIGIN      
        1 gttcctgaat cgaccaatgg cagtggctca gccaagctgt ggcggccgtg tacaccgacg
       61 atggcggcgg gattgacgga tcgttaagtt tattccgatt aaaccatcgg ctgccaaggg
      121 atcagacgca cccggaagtt gtgcagggca caacagagtt ccatcaccaa atcccggatg
      181 cccttcttcc acaaccgcag ccggtctttg acgatccgac accgcttcac actgctgttg
      241 acgtgctcga tccgtaaccg acgctgatgc agttcctggt tggccagttg ctcctccacc
      301 gtgagctctc cgccacgtgg tttcttcgtc ggcatgagaa cgtctacccc aggaagggtg
      361 aacccaagaa agcccaggtc ctgtaacaac ccactccccg ccggtaaggg atagggcgtg
      421 gcgtccgcga tgggcttatc gtgagtgcga ccgccatagg tgtcactgag aaagaggatc
      481 gtgagcgggg cacccaccag caagacattt ttcaccgtct ggtctttttt cttgccgcta
      541 taacaatcgg tctgttcagc agggtcttgg gggcgcacga tgcgtctctc ggtgccgtca
      601 tgggcaaaag gggggagacc tcaccggcta catctggaga ggagatggac tccacgggtg
      661 ggggcgcctc ctccagcgac tccaccaggc tcaccgcgtc agcttccgag acccccagcc
      721 gttgggccag agccgaaagg gagcgagccg ggctatcgcc gaggctgcgc agggcagctt
      781 gcagggccgg caacaaaacg tgaatccact gattggcttt gctctggccc atcccaaaca
      841 ggcgtccctg gaccacttgg agactgtagg tcttgaggtg cgtgagcaag aagaataagc
      901 gatcttcggg ggtgggcaag gggcaattct tgtagacgct aaactggcgt gaggtgcggg
      961 gtttgccatc gagtcgccag tgggccatgt gggcttggaa ggctgcctca aaggggggca
     1021 ccacctgctc aaactcgtcg agggtcaagc tggtcaaatc gagaaattcc atcgggcgag
     1081 actgcacatc ggagaactgg acacccgcca tgagacctgc ctcctgttac aatatggtgt
     1141 tgtcacaggt acatcatatc acaaatctca caaatcggga taaactcacg tgcccatctc
     1201 acccctctcg ttgtcgaccg cctgtcggca tcacaggtcg agaccctgat tgagcagatt
     1261 acaggtgacc cgatccttcc ggcagaggtg gtgcaacaga tcacggtaaa aac
//
LOCUS       DASQSL010000491         4469 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_17961, whole genome shotgun sequence.
ACCESSION   DASQSL010000491 DASQSL010000000
VERSION     DASQSL010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4469
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17961"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            272..2221
                     /locus_tag="VE844_04940"
     CDS             272..2221
                     /locus_tag="VE844_04940"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HZC00716.1"
                     /translation="MLLSGSSASGQDFRVQRQQFIQAREALRAGDLDYFYRIADQLKH
                     YPLYPYLQYDYLAPRLSQAPAREIGDFLDTYPDTVLNTGLRIAWLKILASQEQWHTFL
                     KYYTPQTDPLLRCYHLQAKLSTRSSTEVLHEVKALWLVGKPQPKECDPVFNYLLLKAP
                     QSEDLIWQRIGLAMTAGELSLVRQLSKRLDPAAQQWAALWLEMHEHPATVLARWQEPN
                     DQPITREILAHGITRLAKQDAGYAYNRWLAIKRRYQYTGSAIARVERALVLAGAAHDR
                     HRALQWLDKIDARIADAELQHARLRAALASRDWTRLVRWTEQEPAADMEELCWRYWRA
                     RALEETGAREIAQALYRSLANESDYYGFMAADRLGLPYALKQNGPVLTAQKEAAILAL
                     PPILRARELYLAGYLAEARAEWEYATTQLPPQQIRTAAALAAKRWGWYDRAIMVLGRA
                     KLYDELEVRFPTPFQKLVSYSAQAHYLEPATVYGFMRAESAFNAQARSPAGALGLMQL
                     MPATARYTAAKIGIGPISTAQVLQPEINVKLGTAYLRQMLDKFDGHLAMAAAAYNAGP
                     GRVTQWQPSLQCMPAELWIELIPFTETRKYVRNILFYTAIYQWRMGQRVKPLATRLAI
                     IAPKLDNGVAHLSCISRVSPLVTAD"
     gene            2231..3199
                     /locus_tag="VE844_04945"
     CDS             2231..3199
                     /locus_tag="VE844_04945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011330322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complex I NDUFA9 subunit family protein"
                     /protein_id="HZC00717.1"
                     /translation="MKLKTLTIVGGSGFVGSHLVNRLTKENYRVRVLTRQRERHRHLL
                     VIPTLELLEGDPNAPQVLTRHLAGSDAVINLVGILNERGDDGSGFQAVHVELPRKIVE
                     ACKTNGIERLLHMSALNADAREGPSHYLKTKGEGEDRVHEAAKEGLQVTSFRPSVIFG
                     PGDGLFNRFALLLKIAPFFFPLACPRVRFAPVYVGDVVEAFMRSLNDSATHGRRYDLC
                     GPHQYTLIELVEYTAKQLGLKRRIIPLNDKWSLTQAQVLERFPGKPFSLDNHRSLQMD
                     SVCTGGNGLADLGITPTSVEATVPGYLGKQSQRARYSLLRRFARRG"
     gene            3196..4455
                     /locus_tag="VE844_04950"
     CDS             3196..4455
                     /locus_tag="VE844_04950"
                     /EC_number="2.7.7.72"
                     /EC_number="3.1.3.-"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002690702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004810 - CCA tRNA nucleotidyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0001680 - tRNA 3'-terminal CCA addition
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional CCA addition/repair protein"
                     /protein_id="HZC00718.1"
                     /translation="MKIYQVGGAVRDKLLGRPVTDRDWVVVGAAPKDLEDRGYIRVGK
                     DFPVFLHPQTHEEYALARTERKIAPGYKGFVFHTSPEVTLEEDLRRRDLTINAMAEDP
                     EGHLIDPFGGQRDLESGILRHVSPAFSEDPVRILRVARFAARFGFQVAAETLSLMQQM
                     VRSGEVDALVPERIWAEFEKALGEARPRRFVEVLRECSALDALFPELERLFGVPQPAQ
                     YHPEIDTGLHILLVLEQAARLSQDTRVRFAALVHDLGKGLTPKEHWPHHPGHEQLGLT
                     LIEGLCERYRIPNDYRELACLVARYHGHCHRVQELRSSTLLKTLKALDAFRRPERFAQ
                     FLAACEADARGRTGFEEIPYPQAALFQNALEAANRVNTRELIERGFSGAALGQEIERL
                     RMRAIVQLLSSKKLLKTVPNTISNRGG"
BASE COUNT          926 a         1328 c         1248 g          967 t
ORIGIN      
        1 ttagcacaga cccctttata ccctcagtac cctacagaat gcaacttggt attacacgtt
       61 ccgcgagaag aagccctccc ttaatatcag gctccctcaa gctctcccat ccgtggcact
      121 gtgattctta catcgaactc atgttaattt aatcaaacca cgctaacgat acgtttctta
      181 tcactgcagc gtgtaaacta gactcaagaa aaatcaccaa accactatga tcgttcgtgc
      241 cttatccact ctcagtttac ttatagccgg catgctcctg tccggaagca gcgcctcggg
      301 ccaagatttc cgtgttcaac gccagcaatt tatccaagcc cgggaggccc tgcgtgccgg
      361 cgatctggat tatttctatc ggatcgcgga ccagctcaag cactatcccc tgtatcccta
      421 tctccagtac gactatctgg cgcctcgcct gagccaggcc ccagcgcgcg agatcggcga
      481 ctttctcgat acctatcccg acaccgtgct gaacacaggg ttacggatcg catggttgaa
      541 gatccttgcc agccaagagc aatggcacac atttctaaaa tactataccc cccaaaccga
      601 tcccctgctc cgctgctatc acctgcaagc caagctcagc acccgttctt ccaccgaggt
      661 gctgcacgag gtgaaggcgt tatggctggt aggtaaacct caacccaagg aatgcgatcc
      721 tgtcttcaac tatctgttac tcaaggcgcc acagagcgag gatctgatct ggcaacgcat
      781 cggtttggcg atgacggcgg gcgagcttag cttggttcga cagctgagca agcggctgga
      841 tcctgctgct caacagtggg cggcgctctg gcttgagatg catgagcacc ccgctactgt
      901 cttagcgcgc tggcaggaac cgaacgatca gcctatcacg cgtgagatcc tggcccacgg
      961 gatcacgcgc cttgccaaac aggatgcagg ctacgcctat aaccgctggc tggcgatcaa
     1021 acggcgttac cagtataccg gctcggcgat tgcccgggtg gaacgggcgc tggtcttggc
     1081 cggtgctgcc catgatcggc accgcgcctt acagtggctc gataagatcg atgcgcgtat
     1141 agccgatgcc gagctacaac acgcccgttt acgggcagcc ctggccagcc gggactggac
     1201 ccgtttggtg cgctggaccg aacaagagcc tgcggccgat atggaggagc tgtgttggcg
     1261 ctactggcgt gctcgcgcct tggaagagac aggcgcgcgt gagattgccc aggcgctcta
     1321 tcggagcttg gccaatgaat ccgattacta cgggtttatg gccgccgatc ggctcgggtt
     1381 gccttatgcc ttgaaacaaa acggcccggt gctcaccgct cagaaagaag cagcgatcct
     1441 tgcgctgccc ccgatcctcc gcgcccgaga gttatatctg gccggttatc tcgcggaggc
     1501 gcgtgctgag tgggaatatg ccaccaccca attgcccccc caacagatcc gcaccgctgc
     1561 agcccttgcc gccaaacgct gggggtggta tgaccgcgcc atcatggtcc tgggccgggc
     1621 aaagctttac gatgagctcg aggtgcgttt tcctaccccc tttcaaaaac tcgtgagcta
     1681 ttctgcccaa gcgcattatt tggaacctgc gactgtctat ggattcatgc gtgcagagag
     1741 tgcctttaat gcccaggcac gatcacctgc gggtgcttta ggactgatgc aactgatgcc
     1801 tgcgaccgca cggtatacgg cggcaaagat cgggatcggc ccgatcagca cggcgcaggt
     1861 gctccaaccc gagatcaatg ttaaactggg cacggcctat ttacggcaga tgctcgataa
     1921 gttcgacggc catctggcga tggcagcggc ggcttataac gcggggcctg gccgggtgac
     1981 tcaatggcag ccatccctac agtgcatgcc ggccgagctt tggatagaat tgatcccctt
     2041 taccgagacg cgcaagtatg tccgcaatat tctgttttat acggccatct accaatggcg
     2101 catggggcaa agagtcaagc ctttggctac acgccttgcg atcatcgcgc ctaagctcga
     2161 taacggcgtc gcgcatctca gttgcatttc acgggttagc cccctggtta cggctgatta
     2221 atttgagagc atgaaactca aaaccctgac tattgtgggt ggctcgggtt tcgtaggcag
     2281 ccacctggta aaccggctca ccaaggagaa ttaccgggtt cgggtattga cacggcagcg
     2341 ggagcggcac agacatctgc tcgttatccc taccctcgag ctcctcgagg gtgatcccaa
     2401 tgcgcctcaa gtgctcaccc ggcacttggc gggatctgac gccgtgatca acctggtcgg
     2461 gatcttgaat gaacggggtg atgatggcag cggtttccaa gcggttcacg tcgagcttcc
     2521 ccgcaagatt gtcgaggcct gtaaaacgaa tggcatagag cgcctgcttc atatgagcgc
     2581 gctcaacgcc gatgcaagag agggcccgag ccattacctt aaaactaaag gcgagggaga
     2641 agatcgggtg cacgaggcgg ctaaggaggg acttcaagtc acgagcttcc gtccttcggt
     2701 catctttgga cctggggatg gcctctttaa tcgcttcgcg cttctgctca agatcgcccc
     2761 gttctttttc ccgctggctt gccccagggt ccgctttgcg ccggtctatg ttggcgatgt
     2821 ggtcgaggcc tttatgcgat ccttaaacga ttcggccacc catggccggc gttatgatct
     2881 ttgcggaccg catcaataca ccttgattga gctggtggaa tacaccgcca agcagcttgg
     2941 gctaaagaga cgtatcattc ccttgaacga taaatggtcc ttgacccagg cacaggtgct
     3001 cgagcgcttt cccggtaaac ccttctcact tgacaatcat cgttccctgc agatggatag
     3061 tgtctgcaca ggcgggaatg ggcttgcgga cttgggtatt acccctactt ccgtcgaggc
     3121 tacggtcccc gggtatcttg gaaaacagag ccagcgggcg cgctacagcc tcttacgccg
     3181 tttcgcacga cgcgggtgaa gatctatcag gttgggggcg ccgtccgcga caaactcctg
     3241 ggccgtccgg tcacggatcg ggactgggta gtggttgggg cggcgcctaa ggatctggaa
     3301 gatcgaggtt acattcgcgt cggcaaagac ttcccagtct ttcttcaccc acaaacccac
     3361 gaagaatatg cacttgcgcg caccgagcgc aagatcgctc cgggctacaa aggattcgtc
     3421 tttcatacct ctccggaggt cacgctcgag gaggatctca ggcggcgtga tctcaccatc
     3481 aacgccatgg ccgaggatcc cgaaggccat ctgatcgatc cgtttggcgg ccaacgggac
     3541 cttgaaagcg gtatcttaag gcatgtttca ccggcgtttt cggaggatcc cgtgcggatc
     3601 ctgcgggtgg cgcgttttgc cgcgcgtttt ggcttccagg tggccgctga aaccctgagc
     3661 ttgatgcagc agatggtgcg atccggcgag gtcgatgccc tcgttccgga gcggatctgg
     3721 gccgaatttg agaaggcttt gggcgaagcg cgcccgcgac gcttcgttga ggtactacgc
     3781 gagtgcagcg ccctggacgc gctctttcct gagctcgagc ggctgttcgg cgtgcctcaa
     3841 cccgcccaat accatcccga gattgacacg gggctgcata tactcctggt cctggagcaa
     3901 gcggctcggc tcagtcagga cacccgcgtc cgcttcgctg cgttggtaca tgatctgggc
     3961 aagggcctca ccccaaaaga acactggccc caccaccctg gccatgagca gctcggcctc
     4021 acgcttatcg aggggctttg cgaacgctac cgtataccca acgattaccg cgagctggca
     4081 tgtctggtgg cacgctatca cggccattgt caccgggtac aggagttgcg ctcctccacc
     4141 ctgcttaaga ccctcaaggc cctggatgcc tttcggcggc ccgagcgttt cgcccagttt
     4201 ttggctgcct gtgaagccga tgcgcgtggc cgcaccggtt ttgaagaaat cccttatccc
     4261 caagccgctc tgttccaaaa cgcattggag gcagccaacc gggtcaatac ccgtgaactc
     4321 atagagcggg gcttttctgg ggcggccctc ggccaggaga tcgagcgatt acggatgcgg
     4381 gcgatcgttc agttactctc ttcaaagaag cttttaaaaa cagtgcctaa tacaatctcc
     4441 aaccgtggag gttaaagaac aaaatagcc
//
LOCUS       DASQSL010000492         1061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_4306, whole genome shotgun sequence.
ACCESSION   DASQSL010000492 DASQSL010000000
VERSION     DASQSL010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1061
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4306"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..316)
                     /locus_tag="VE844_04955"
     CDS             complement(<1..316)
                     /locus_tag="VE844_04955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00719.1"
                     /translation="MGIYNLIRAVMVRAALHAGLGPRQLSFTGAVQALNGFVPALVLA
                     EDAVQRVLLDALGVSVAAHRIGKRPNRVEPRAVKRRPKAHKLLSGVSIKFFSIVVMTL
                     EFG"
     gene            complement(827..>1061)
                     /locus_tag="VE844_04960"
     CDS             complement(827..>1061)
                     /locus_tag="VE844_04960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00720.1"
                     /translation="GLLANRCKAYTLPWCRQALGQGATPPPEPKSVAQWMQQWTGIDI
                     TRCPVCGHQPLERIPVPAVLGASPNRDPPVLHP"
BASE COUNT          222 a          299 c          317 g          223 t
ORIGIN      
        1 gaccaaactc gagcgtcatt accacaatgc taaaaaactt aattgaaaca ccactaagca
       61 gcttatgagc tttcgggcgg cgtttgacgg cccgaggttc cacccgattg gggcgcttgc
      121 cgattcggtg ggccgccacc gataccccta acgcatcgag tagaacacgt tgaaccgcgt
      181 cctccgctaa gaccaaagcc ggaacaaagc cgttgagcgc ctgcacggca ccggtgaagc
      241 tcagttgacg cgggccaagc ccggcgtgca gggcagcccg aaccatcacg gctcggatca
      301 aattgtagat acccacgggc ttacgcccgt ggcacttgct gaggaagttt tcgtttatat
      361 tgaggactgc atgccctcaa actccctgta aggatggcat tcacccacgc tcttatgagc
      421 atggtcctct gccatggttt gatagccact tgtaggatgt ctcaaaaacg aagagcatct
      481 tttccgtcgt acgggaggat gactcggtct ttgcccacga aactcagacg tatgacggaa
      541 aagatgcgtt gaactgagcc gcgttgccga tgtcttttgc tcgctatggg gattgaatca
      601 cagagatgag gctggatgaa tgctggtgat ggtgaagtcg ccctttggca gaggctgatt
      661 caggtgccgg catcgtgttg gcctgtgtgc aacccgttag ccttgcactg cagatgccca
      721 ctggcaaggc gcttacgcgc acttctgcaa tcgctactgc cagggggaat caacccgcag
      781 cggcaggctc tgtaatgggc gtctggcgtg cacacgcaag ggctgcttaa ggatgtagga
      841 ccggtgggtc tcggtttggg ctggcaccca gcaccgctgg caccgggata cgctcgaggg
      901 gttgatgccc acagaccgga cagcgcgtga tgtcgatgcc cgtccactgc tgcatccact
      961 gcgccacgct ctttggctca gggggtggtg tcgccccttg gcccagggcc tgtcgacacc
     1021 agggcaaggt gtaggctttg cagcggttag ccagcaagcc g
//
LOCUS       DASQSL010000493         2339 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_45013, whole genome shotgun sequence.
ACCESSION   DASQSL010000493 DASQSL010000000
VERSION     DASQSL010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2339
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45013"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(239..385)
                     /locus_tag="VE844_04965"
     CDS             complement(239..385)
                     /locus_tag="VE844_04965"
                     /inference="COORDINATES: protein motif:HMM:NF019984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00721.1"
                     /translation="MVRHFNRTLVAWAMRKYRRLKGHKTVRVYSSKESHPDNRVYSCT
                     GSAG"
     gene            complement(576..854)
                     /locus_tag="VE844_04970"
     CDS             complement(576..854)
                     /locus_tag="VE844_04970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00722.1"
                     /translation="MGKPAATDRPYLPSLSHSLTLDGLIHCKTEAQAQALKAELALRL
                     AECGLELHPAKTRIVYCKDGSPKGQYPNTQFDFLGYTFRARVVKNRKR"
     gene            complement(954..2036)
                     /gene="ltrA"
                     /locus_tag="VE844_04975"
     CDS             complement(954..2036)
                     /gene="ltrA"
                     /locus_tag="VE844_04975"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: protein motif:HMM:TIGR04416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZC00723.1"
                     /translation="MIGRLQESLRKKTYRFQPVRRVDIPKPKGGTRPLGIATVEDRVV
                     QTAMKLVLEPIFEADFHDCSYSYRPKRDAQMASLAIREDLYRHAWGVVEIDFQSYFTT
                     IPHDKLLTLIRQRVVDGSMLRMIKQSLKVGVVYQGRVEPTRVGVPQGSPIAPLYSNIY
                     LNLLDQVWHKRGYPEKLGATLHRYCDDAILVCRGNASQALEAFEAIARRMGLIINREK
                     TRITKLTEGFNFIGFHFVKPRSPNTGKWVNYIFPSKEAQRNIRRRIKYFTKRRAPMPP
                     DEFVRQINQAVRGWVNYYTHTNASQAFRALQRFINTRFRRYLTYRSKGRGFGWKKYPN
                     KRLYAMGIIYIGSGLIRYQSAPAHAL"
BASE COUNT          470 a          713 c          600 g          556 t
ORIGIN      
        1 atttattgcc ctccctggga gggcttcttc aaaccacccg ctatgcgggt ggtagctgat
       61 tgcgaagttc tccgctccat agccactacg aagtcggctg tcgtcttccc ggaaggtcac
      121 gtccagcacc caattgagcc gagtggcgag tagaccgggg gaattgcacc ccccgcctct
      181 cacagaacgg tgcgggagcc tctcgactca caccgctccc atcaagcaac cgctccaatc
      241 atcccgcgct gccagtgcac gaatagaccc ggttgtctgg gtgcgattcc ttcgatgaat
      301 agactcgcac ggtcttgtgg cctttcagtc gacgatactt ccgcatagcc caggcaacca
      361 acgtcctgtt gaaatggcgc accatcggat acagtgctga cggacagaaa cggccatagt
      421 attccagcca tcctcacagg atcgggttat acatccgacc aatgtctgcc aagctcagct
      481 ccattcggtt gcggaagttt cactttcgtg tcgtttgccg catggctttg agcgctgcgg
      541 cgctaatcgc gggcgtaaag cttacaaaca gaccgttacc gtttgcgatt cttcaccaca
      601 cgcgcccgaa aggtgtagcc gagaaaatca aactgcgtgt tcggatactg acctttgggg
      661 ctgccatcct tgcagtagac tatccgggtc ttagccgggt gcaattccaa gccgcactct
      721 gctagccgaa gggccagctc agccttcagt gcttgcgctt gtgcctccgt tttgcaatga
      781 atcagcccgt ctagggtaag ggaatggctc agcgacggta gatagggcct atctgttgct
      841 gcgggtttcc ccatcggcag tgcctcacta gcccgatcct gatcggttca ccatcccctt
      901 cccatcccac cgtacgttca gttttcccga gtacggcggt ccgacagtct tcgttacaag
      961 gcatgcgcag gtgcgctttg gtacctgatg agaccgctgc cgatgtagat gatccccatg
     1021 gcatacaatc tcttattcgg gtatttcttc cacccaaaac ctcggccttt actgcgatag
     1081 gtcaggtacc gtcgaaaacg cgtgttgatg aatcgctgta aggcacgaaa cgcctggctc
     1141 gcgttggtat gggtgtaata attcacccac ccacgcaccg cctggttgat ctgcctgacg
     1201 aattcatccg ggggcattgg cgcccgccgc ttggtgaagt actttatccg acgacggata
     1261 ttgcgctggg cctccttgct cgggaagatg tagttcaccc atttgccggt attggggcta
     1321 cggggtttca caaagtgaaa accgatgaaa ttaaaaccct cggtcaactt tgtgatccga
     1381 gtcttctcgc gattgatgat cagtcccatc cgccgcgcaa tggcttcaaa agcctctagg
     1441 gcttgagagg cattcccacg acagaccaag atggcatcat cgcagtaccg atgcagcgtt
     1501 gcgcccagct tctctgggta gccccgcttg tgccacacct ggtcgagcag gttcaaataa
     1561 atattgctgt agagcggtgc gatcggggaa ccctggggaa cccctaccct cgtcggctct
     1621 acccgcccct gatagaccac accgaccttg aggctctgct tgatcatccg cagcatgctg
     1681 ccatccacca cgcgttggcg aatgagcgtc aacagcttat cgtgagggat agtcgtaaaa
     1741 tagctttgga aatcaatctc cacgacgccc caggcgtgcc ggtagaggtc ctcccggatg
     1801 gccagcgagg ccatttgggc atcccgcttc gggcggtagc tgtaagagca gtcatggaag
     1861 tcggcttcaa agatgggctc gaggacgagc ttcatggcgg tctgcaccac gcggtcctca
     1921 accgtcgcga tcccaagcgg gcgtgtaccg cccttgggct ttgggatgtc tacccgccgc
     1981 accggttgga atcgataggt cttcttgcgt aggctttcct gcaatcgccc aatcatctcc
     2041 cccttcttgt ccgctcgaca caatcgcctc gatggtctct ccatctaccc caggtgcccc
     2101 ttggttcgcc ttgacttgtc gccaagcctc ccacaggaca tcctcgcgat ataccttatc
     2161 gtacagactg tagaacttca cctccttgtc ctgtttggcc ttgtaatata gggtcctctg
     2221 cagctgccga acttcatttg tttcgtttct agccatcagg caatcaaaac ctcctcaact
     2281 gcttcaaaca ccattgactg aagtagggtc ccttcccctc gggctgggtt atgctgtcc
//
LOCUS       DASQSL010000494         1096 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_58561, whole genome shotgun sequence.
ACCESSION   DASQSL010000494 DASQSL010000000
VERSION     DASQSL010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58561"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(284..730)
                     /locus_tag="VE844_04980"
     CDS             complement(284..730)
                     /locus_tag="VE844_04980"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZC00724.1"
                     /translation="MMAAEILWRTPGKMTQLEQRSLELLIEEVSDEFVPPLTTRSSTT
                     QAALASASGSASSSYFDELLMQHCLLLIECDQLQGFLSFRTFHRDFRLPQIGICIYVS
                     AISVRPAARGRGLARLLYQKLLGLPETFPAWILLRTRSTNTHHYNC"
     gene            771..>1096
                     /locus_tag="VE844_04985"
     CDS             771..>1096
                     /locus_tag="VE844_04985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00725.1"
                     /translation="MIRLMALRLTYLIVIRLVAWMVLLTRSAAGKDVESVVLRHQLAV
                     LRVRPRMYWGPGKSPHSSGHSPPPPDWPSRHAPNDPALAPPTGGTPMDHQPPPAWPTT
                     HPRRTGA"
BASE COUNT          225 a          332 c          314 g          225 t
ORIGIN      
        1 gccaggtggc gctcacaaac ctcgtcggga gatgtctccc ggccacctcg gtcaacatcc
       61 tgcgctgccc agctcattcg gtcgcgtatc gcgttctatg gtgtggcgtg gaggagtact
      121 gcgcccgcct ccgtgaacac caccgcagag gtataccgct atcatgacat cactcgggga
      181 agttgagctg gatgctgcta ccgcttgcgc ccaaggtaga tactgtcaac cccaggatct
      241 ctgtaatgag gaacggtaag gaggtgcttg aatccgaggc tatctagcag ttgtaatgat
      301 gcgtgttggt agaccgtgtg cgtagaagaa tccatgcagg aaatgtctcg ggaagcccca
      361 agagcttctg gtatagcagg cgagcaagtc cgcgtcctcg cgccgcagga cgaacggaaa
      421 tggcgctgac gtagatgcag attcctatct gcggcaggcg aaaatcacgg tgaaaggttc
      481 ggaaggaaag aaacccttgc agttgatcgc actcgattaa aagaagacaa tgttgcataa
      541 gcaattcatc aaagtagcta ctcgatgcgc tgccactggc actcgccagc gctgcctggg
      601 ttgtactgct tcgagtagtc agcggtggaa caaattcgtc tgatacttct tcgatgagta
      661 gttctaggct gcgttgttct aactgtgtca tcttcccggg cgtgcgccac aagatctcgg
      721 cagccatcat cactccccta taaggttcct atcaggagcg tagcgccggc atgatccggc
      781 taatggccct tcggctgacg tacctgatcg tgatccggct cgtggcctgg atggttctgc
      841 tcacgcggtc cgcagcgggc aaggacgtcg agagcgtcgt tctccgtcac cagctcgcag
      901 tgcttcgcgt cagaccccgg atgtactggg gacccggcaa atcgccgcac tcgtccggcc
      961 actccccgcc accgccggat tggccttctc gtcacgcccc taacgatcct gcgctggcac
     1021 cgccgactgg tggcacaccg atggaccacc agccaccgcc agcctggccg accacccatc
     1081 cccgccggac cggggc
//
LOCUS       DASQSL010000495         1058 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_111984, whole genome shotgun sequence.
ACCESSION   DASQSL010000495 DASQSL010000000
VERSION     DASQSL010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111984"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(512..>1058)
                     /locus_tag="VE844_04990"
     CDS             complement(512..>1058)
                     /locus_tag="VE844_04990"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HZC00726.1"
                     /translation="LTAPLAPVKVLRANIFAPPFHSGSFDAIMSIGVVHHTGDAHQAI
                     RALVELLRPGGQLFIQVYASRGPRRDRWNARLLRLTNRVPTRLLYACAYGLVALMYVP
                     VARHLMKVGLHYVTLVSYSPRRTFRRNVADTFDWHCAPYKSFHTQDELASLLQDCGLT
                     RITVTNPGYRGGITLLGEKPR"
BASE COUNT          228 a          273 c          326 g          231 t
ORIGIN      
        1 catgaggatc gcgaaatttg gtgaagcgaa agccttattt gtcggtccta acatataaat
       61 attgtgcttt cgtgccgttc atgtatttag gctagagacg atgccaagtc cttttgctta
      121 tacagccgga actattcagg agcacctatc ctccggcgac tcccctcgac agcagttctt
      181 aggactctta aataatggta ctgttgtata catctcataa tgcaccggtg taaagcccat
      241 aatatatcta tctttggaag ggtaaaagat tattgtgagt tgcctccaaa accttctgga
      301 cgtaaggttt gactggtcag gagatagtac ggcgggtgtg actcaatatc aatagcgtgt
      361 atacaatagc aaggatcttc gtcattttgg tgatgcaggg tggatcgagc cgcgaagtcc
      421 gtgcggagtg aagcccaccc cacctcgcag gttgtaggtg tttgtaatca cgggggttgg
      481 cgaggagtgg gtggatcctg cctaggtgtc gctatcgcgg tttttcaccg agcagcgtga
      541 tccccccgcg atagccagga ttggtcaccg tgatgcgcgt caacccacag tcctgcagga
      601 ggctcgccag ttcgtcctgg gtatggaatg acttatacgg cgcgcagtgc caatcaaagg
      661 tgtcggcgac gttgcgccgg aaggtgcgcc ggggcgagta ggacacgagg gtgacgtagt
      721 gcaggcccac tttcatgagg tggcgggcca cgggcacgta catcagcgcc acgagcccgt
      781 aggcgcaggc gtataagagc cgtgtcggca ccctgttggt caggcgcaag agccgggcgt
      841 tccagcgatc ccggcgcggg ccccggctcg catagacctg gatgaagagc tggccccccg
      901 gccgcagcaa ctccacgagc gcgcggatcg cctggtgtgc gtctccggta tggtgcacca
      961 ccccaatgga catgatggca tcgaagctgc ccgagtgaaa cggtggcgca aagatgttgg
     1021 cgcgtagcac cttcaccggg gccaggggcg cagtcaag
//
LOCUS       DASQSL010000496         1324 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_4326, whole genome shotgun sequence.
ACCESSION   DASQSL010000496 DASQSL010000000
VERSION     DASQSL010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1324
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4326"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..587)
                     /locus_tag="VE844_04995"
     CDS             complement(<1..587)
                     /locus_tag="VE844_04995"
                     /EC_number="5.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005010707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase"
                     /protein_id="HZC00727.1"
                     /translation="MPDLVIVESPAKAKTIEKILGKGYTVKASVGHVRDLPPKRLGVD
                     LQASFAPEYIVIRGKAKVLEELRASAKRAGKIYLAPDPDREGEAIAWHIAQELDGKKP
                     DTIYRVLFNEITPRAITAAMRNPGRIDEHKVNAQQARRILDRLVGYQISPLLWRKVRR
                     GLSAGRVQSVALRLICDREKEIEAFVPQEYWTVTVV"
     gene            complement(596..>1324)
                     /gene="dprA"
                     /locus_tag="VE844_05000"
     CDS             complement(596..>1324)
                     /gene="dprA"
                     /locus_tag="VE844_05000"
                     /inference="COORDINATES: protein motif:HMM:TIGR00732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HZC00728.1"
                     /translation="KVVAEQLARGLVARGVTVVSGLARGIDSVAHLGTLEGGGQTIAV
                     LGCGLSYMYPPENRRLAERISRQGAVVSEFPMQAKPDRLNFPLRNRTISVLSLGTVVV
                     EAGERSGALITAQWALDQGREVFAVPGNITAPTSRGTNRLIKMGAKLVEGVDDIIEEF
                     PYHAFSGRQAPVLDCEETTQADITLDERRLLALLDPVEPRHIDWLIERVHLPTSMVNA
                     LLLQLELAGRLTQLPGKLFLKALR"
BASE COUNT          263 a          421 c          358 g          282 t
ORIGIN      
        1 accacggtca ctgtccagta ttcctgcggc acaaaggctt cgatctcttt ttcgcggtcg
       61 cagatgagcc gcagggctac cgactgcaca cggccggcgc tgagcccgcg gcgcacctta
      121 cgccataaca atggactgat ctgatagccg acgagacggt cgagaatacg gcgtgcttgt
      181 tgggcattga ctttgtgctc atcaatgcga cccgggttgc gcatggcggc cgtaatcgcc
      241 cgtggcgtaa tctcgttaaa caggacgcgg tagatagtgt ccggcttctt cccgtcgagt
      301 tcctgagcaa tatgccaggc gatcgcctca ccctcccggt cagggtctgg ggccaggtaa
      361 attttccccg cccgcttggc actggcacgt aactcctcca ggacctttgc cttgccacgg
      421 atgacgatgt attcaggggc aaagctcgcc tgtaagtcta cgccgaggcg tttggggggt
      481 agatccctga cgtgacctac cgaggccttc acggtatacc ccttgccgag aatcttctcg
      541 atggtcttgg ctttcgccgg cgactcaaca atcaccaaat ctggcataga tctccctacc
      601 gcaaagcttt gagaaaaagc ttgcccggta actgcgtcaa tctccctgcg agctcgagct
      661 gtaatagcaa cgcgttgacc atgctcgtgg gcagatgaac ccgttcaatg agccagtcga
      721 tatgtcgcgg ctcgacggga tcgagtaagg ccaacagacg gcgttcatcc agtgtgatgt
      781 ccgcctgggt ggtttcttca cagtccagca ccggtgcttg cctaccactg aaggcgtggt
      841 acgggaactc ctcgataatg tcgtcaacgc cttcgaccaa tttggccccc attttaatca
      901 agcggttggt gccacgactt gtcggtgccg taatgttccc tggcacagca aagacctcac
      961 gcccttggtc caaagcccac tgggcggtga tcagtgcccc actgcgctcc cccgcttcga
     1021 cgacgaccgt gcccagcgac aagacgctga ttgtccggtt gcgcaatgga aaattcaacc
     1081 ggtccggctt tgcctgcatg ggaaactctg acaccaccgc cccttgacgg ctgatccgtt
     1141 cagccaagcg ccgattctcc ggcggataca tatatgataa gccacaccct agcacggcaa
     1201 tcgtctggcc gccaccctcc agagtcccca gatgggctac gctgtcgata ccgcgggcca
     1261 gcccgctgac gacggtcact ccgcgtgcaa ccaagcctcg cgctagttgc tcggcgacca
     1321 cctt
//
LOCUS       DASQSL010000497         1076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_127296, whole genome shotgun sequence.
ACCESSION   DASQSL010000497 DASQSL010000000
VERSION     DASQSL010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127296"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            248..499
                     /locus_tag="VE844_05005"
     CDS             248..499
                     /locus_tag="VE844_05005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008329283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00729.1"
                     /translation="MAVLNIRNLPDDVHARLRVRAAEAGRSMEAEAREILTIVCRADE
                     AKRPASILQDLVDELYGVDKPEGVVQSLLDERRREAQNQ"
     gene            496..873
                     /locus_tag="VE844_05010"
     CDS             496..873
                     /locus_tag="VE844_05010"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HZC00730.1"
                     /translation="MIALDASALLAFMFRESGHEQVAEVIEESCLSTVNLAEVLGRFV
                     RDGHNSAAVLTRLQSMAIELVPLSVSHAALIAEMLPKTQALGLSLGDRACLALAAARE
                     IPALTADQPWVKADIGIGIQLIR"
BASE COUNT          223 a          303 c          310 g          240 t
ORIGIN      
        1 cggcaaactt caaggcagag acgacccgat tggcgcaggg cttggttttt ccagagagcc
       61 cggtaggctg gactgagcct tgcgaagccc aacatcaata gatgcctcgc gctttaaccg
      121 ctgggctttt cagccagcct acaactttac cgaggccaag aacgtgtgca taagacgtgt
      181 gtgatccact gaccttcccc agggtggaat gattgacatc accgccaaca atgcctacat
      241 tgtgaccatg gcagtattga acattcgtaa tttacccgac gatgtgcatg cgcgcctccg
      301 ggtgcgagca gcagaggcag ggcgcagcat ggaggcggag gcccgggaaa tcctgaccat
      361 cgtatgccgc gcggatgaag ctaaacgccc ggcctccatc cttcaggacc tcgtcgacga
      421 gctttacggc gtcgacaaac cggagggtgt agtgcaatcc ttgctggatg aacgtcggcg
      481 cgaggcccag aaccaatgat tgcactggat gcttcggcac tcctggcatt catgtttcgc
      541 gagtcaggcc atgaacaggt tgcggaagtg attgaggaga gctgtctgtc cacagtcaat
      601 cttgctgagg tgcttggtcg tttcgttcga gacggccaca acagcgcggc ggtgttgacg
      661 cgattgcaat cgatggcgat tgaactcgtg cccttgtcgg tgtctcacgc tgcactcatc
      721 gcggagatgt tgcctaagac ccaggcgctg ggactttcgc tgggtgaccg ggcgtgcctg
      781 gcactcgcgg cggctagaga gatacctgca ttgaccgcgg accagccttg ggtcaaggcc
      841 gatatcggta tcggtatcca actgatccgc tgagtcttaa gcgcgttagt ttcttattcc
      901 atgtcagacc ccccgatatc ctcttctcgc aacacgcccc cgagccagtt gggctatatc
      961 ctcgcgcacg ccgcttgcat ttatctcgtg cgcgcagcgc tatgctcgct acggtttact
     1021 gatgatccta aatgacaggt actggttccg ttcaattcca aacgcatggg ggtaag
//
LOCUS       DASQSL010000498         1123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_29605, whole genome shotgun sequence.
ACCESSION   DASQSL010000498 DASQSL010000000
VERSION     DASQSL010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29605"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..270)
                     /locus_tag="VE844_05015"
     CDS             complement(<1..270)
                     /locus_tag="VE844_05015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00731.1"
                     /translation="MQALDLERFSLRGLLGNGATYEVYEAIDRETGQDVVLKRPWAQC
                     LRGGQHRSIDEQSARLIEAQRLLGGVAPHISRLVGYAGRGRHDSYF"
     gene            766..>1123
                     /locus_tag="VE844_05020"
     CDS             766..>1123
                     /locus_tag="VE844_05020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZC00732.1"
                     /translation="MLILRCSRQGAWTAMSIRQISAVTLAVRDMARAVAFYEAIGFER
                     LYGGGTATFTSYRLGETYLNLILTPSYTGQWWGRVIFRVDQVDALHAALAAQGMRPEL
                     PRDGAWGERYFHLKDPD"
BASE COUNT          223 a          320 c          354 g          226 t
ORIGIN      
        1 gaaataggag tcgtgccgac cgcgcccggc atagccaacc aggcgcgaga tgtgcggggc
       61 tacgccaccc aggaggcgtt gcgcctcgat caagcgggcc gactgctcat cgatagagcg
      121 gtgctggccg ccgcgcaaac actgcgccca gggccgtttc aggactacgt cttgaccggt
      181 ttcccggtcg atcgcctcat acacctcgta agtggctcca ttgccgagca ggccgcgtaa
      241 gctaaagcgt tcgagatcga gggcttgcat ggttatcggt catcacctcc agcctgacag
      301 agataggcag cgttgccacg cgtgtgcgct catcccaggc ggccttcttg atgaagctaa
      361 atcgatgtga cgttgtgagg tcataactct cactggaccc ataacgaagt gacacgtgcg
      421 attctaggcc aagtgtgatg ctgtgtcaat gctgattggc gctgggtttc tgtcctcctg
      481 cctgtgccat cgtccccctt cggagaactg acaaggggag gtataggtcc ctcccccctt
      541 gcgggggaag gataggcgcg aggcgttcac ccccacccgc cccctccctc atcaaggggg
      601 agggcaggtt ctaggtgcca aggctgccgc aatacctccc ccagtcagcc ttgagaggag
      661 gtgttagtaa aataaccctg cggaaaggga gcgcaaacgt gcagtgcacg ttcatcaccc
      721 tgcaagaaga catctcacgt ccgatggggt atcatgaggc tgactttgct aatcctacgg
      781 tgttcacgac agggagcctg gacggcgatg agtattcggc agataagcgc ggtgacactg
      841 gcagtgcggg atatggctcg tgcggtggca ttctacgagg ccatcggctt cgaacggctg
      901 tacggaggcg ggacggcgac gtttaccagt taccgtctgg gtgagaccta tctgaacctt
      961 attctcacgc catcgtacac gggccaatgg tgggggcggg tgatctttcg tgtcgaccaa
     1021 gtcgacgcct tgcatgcggc gttagcggcc cagggcatga ggcccgagct gccgagggat
     1081 ggcgcatggg gggagcgtta ttttcacctc aaggatcccg acg
//
LOCUS       DASQSL010000499         1249 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_141157, whole genome shotgun sequence.
ACCESSION   DASQSL010000499 DASQSL010000000
VERSION     DASQSL010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1249
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141157"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(61..603)
                     /locus_tag="VE844_05025"
     CDS             complement(61..603)
                     /locus_tag="VE844_05025"
                     /inference="COORDINATES: protein motif:HMM:NF024172.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00733.1"
                     /translation="MNSIRTRGKKSAPHRDPADPPRRRGNKRKGHGTYANDRPPIISV
                     ISRETGEQRFWVCDHADRRTCHELIAENLPPNSTRLYTDEWQGYHGSHAAHATVGHRA
                     REWARDDDGDGRREVHCNTCEGAGVALRTYLRVFRGVHKRYLHLYVATYEAIVNAKRV
                     TPQLIRRMCIGNPAAHTGYT"
     gene            complement(524..997)
                     /locus_tag="VE844_05030"
     CDS             complement(524..997)
                     /locus_tag="VE844_05030"
                     /inference="COORDINATES: protein motif:HMM:NF024170.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00734.1"
                     /translation="MIDFPIGELLDDSICLLWLERHLHPAGFTCPHCGSLSRRIFRAQ
                     GHFPAYRCRACEGYYTLLTGTVFATTRQRPATLVLLLRGIAKGEPTARLARELGLSRK
                     QLHTLRQRVQSNLNETAPTGVMTGTAFEADELYQNAGEKKRAPSRSRRPAPAARQ"
BASE COUNT          261 a          358 c          377 g          253 t
ORIGIN      
        1 ggacaaaaag gggatattgc tgaaacaaca cttggacaga caaaggcaaa aagctttggc
       61 tcatgtgtag ccagtatgcg ctgccgggtt cccgatgcac atccgtcgga tcagctgggg
      121 cgtgacgcgt ttggcattga ctatcgcttc atacgtcgcc acatagaggt gcaggtatcg
      181 cttatggacc ccgcggaaga cgcgtaggta ggtccgaagc gccacgcccg ctccctcgca
      241 ggtgttgcaa tggacctcac gtcggccatc cccatcgtca tcccgggccc attcgcgggc
      301 cctgtggccc acggtggcgt gggcagcgtg gctgccatga tagccctgcc actcgtccgt
      361 atagagccgc gtgctgttgg gcggaaggtt ctcggcaatc agctcatggc aggtgcgcct
      421 gtccgcatga tcacacaccc agaagcgctg ctcgcccgtc tcccgcgaga tcacgctgat
      481 gatgggggga cggtcgttgg cataagtgcc gtgccctttg cgcttattgc cgcgccgccg
      541 gggcgggtcg gcgggatcgc gatggggcgc gctttttttc ccccgcgttc tgatagagtt
      601 catccgcctc aaaggcggta ccagtcatca cgccggtcgg ggcggtctcg ttcaggttgc
      661 tctgaacacg ctgccggagg gtatggagct gtttgcgcga cagccccaac tcacgcgcga
      721 ggcgcgcggt gggctccccc ttggcaatcc cgcgcagcag cagcactagg gtcgccgggc
      781 gctgccgggt tgtcgcgaac accgtcccgg tcagcagtgt gtaatagccc tcgcaggccc
      841 gacagcgata ggccggaaaa tgcccttggg ctcggaatat gcgccgtgaa agagagccac
      901 agtgcggaca ggtgaacccg gccggatgga ggtgacgctc caaccagaga aggcagatgc
      961 tatcatcgag taattcacca atcgggaagt caatcatacg gcaatcttac cacgattggc
     1021 acgctgacta cacatgagcc ttgccctttt gccgtaagta tctacaaatg cagcgattta
     1081 tataagcaac aggtcttgca tagctgaggg cgagaaagtg tgactccaca agaagttacc
     1141 taccttagca acgcaaaaag ggcaaaagtc gagattagag gtggtaagga aatataaccg
     1201 catagtttta ctcgcaagtc tctccgtttt tttctgtttc cgaagccgt
//
LOCUS       DASQSL010000500         1878 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_18010, whole genome shotgun sequence.
ACCESSION   DASQSL010000500 DASQSL010000000
VERSION     DASQSL010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1878
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18010"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..535
                     /locus_tag="VE844_05035"
     CDS             <1..535
                     /locus_tag="VE844_05035"
                     /inference="COORDINATES: protein motif:HMM:NF025001.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HZC00735.1"
                     /translation="VVVPTKVPQMDLVPANLDLAGVEAELIGEIGWDRTLKDALDKIQ
                     DSYARILLDCPPSLGVLTTNALVAAEIVIVPLQCEYLALRALKQLQKIIAKVNRKANP
                     HLHTRILRTMYDGRTIHDREIFEEIARVGGEQVFQTFIKRTIKIADAAVEGEPIIRYA
                     TDSDAAQAYRKLAQEIA"
     gene            538..822
                     /locus_tag="VE844_05040"
     CDS             538..822
                     /locus_tag="VE844_05040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00736.1"
                     /translation="MATRRKHPNIKGKGVDVFFQEEEGAAPPGRSPQAPDVQEARRQR
                     TPEKREMVTFYLPPALVDKLDRVWIERRLKDRKVQKSHIVTEALEAYLKD"
     gene            1155..1499
                     /locus_tag="VE844_05045"
     CDS             1155..1499
                     /locus_tag="VE844_05045"
                     /inference="COORDINATES: protein motif:HMM:NF013561.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix protein, CopG family"
                     /protein_id="HZC00737.1"
                     /translation="MGRKILGFSVPPLLAEEFEEIAKQERRSKSELFREMLRFYQRYR
                     QQRAQVEDRWLEELIQEVKEEEARHPTSQEELLKEEAELAQYGAEQAKKLGIKSKDIN
                     RIIYESRKRRRA"
     gene            1579..>1878
                     /locus_tag="VE844_05050"
     CDS             1579..>1878
                     /locus_tag="VE844_05050"
                     /inference="COORDINATES: protein motif:HMM:NF024861.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HZC00738.1"
                     /translation="MERRYQLLISSAIVNELADVLRTDFHWEERRLRRRIRLVTRVGT
                     IITPYIALNVIPDDPDDDRILECAVAGRANLIVSGDRHLRRLRVYEGIPIIRPIDF"
BASE COUNT          460 a          524 c          487 g          407 t
ORIGIN      
        1 tgtcgttgtg cccaccaagg ttccccagat ggatctcgtg ccagccaacc tggacttagc
       61 tggtgtcgag gccgagctca tcggcgagat cggctgggac cgcaccctta aggatgcact
      121 tgacaagatc caggacagct acgcgcggat cctgctggac tgtccaccgt ccctcggggt
      181 gctgactacc aatgctctag tcgcggccga gattgtcatc gtgcccttgc agtgcgagta
      241 cctcgcgctc cgcgctctca agcagctcca aaagatcatc gccaaggtta accgtaaggc
      301 caatccgcac ctgcataccc gaattctccg caccatgtac gacggccgca cgattcacga
      361 ccgcgagatc tttgaggaaa ttgcccgcgt gggcggtgaa caggtcttcc agacctttat
      421 taagcgcacc attaaaattg ctgacgctgc ggtagaaggc gagcccatta tccgatacgc
      481 cacggactca gacgccgccc aagcctaccg gaagttggca caggagatcg cataaccatg
      541 gcaacaagaa gaaagcatcc aaatattaaa ggcaagggcg tggacgtctt tttccaagaa
      601 gaggagggcg ccgctccacc agggcgatct cctcaggcac cagatgtcca agaggcccgg
      661 cggcagcgga caccagaaaa gcgcgagatg gtcaccttct acctcccccc tgccctggtc
      721 gataaactgg accgtgtctg gattgagcgg cgcctgaaag accgaaaagt ccagaaatcc
      781 cacattgtca ccgaggcgct tgaggcctac ctcaaagact aacatctgaa aattttttca
      841 tcttaaaatt taaacatttt atgacctaaa tggtaaaatt gtatctatcc cctatggaga
      901 actattatct catccctgtg gctgacgaag agctcgttta tctgccggta ctcctcgcgc
      961 ggccgagcag ggataggtgc gaccatgctc tcacctaata tgtccacctt gcccgcctgg
     1021 ctgatctgtt tgcaggaacc aatcattcag gaagatgcct aactgatcgg ctgaagcact
     1081 gcttgacagg gtacacccat atgttacaat gggcgtactt tgtttaacat tgttaaatta
     1141 gggagtgtat gttgatgggt cgtaaaattt taggcttctc cgtcccccct ctcttagcag
     1201 aagagtttga ggagatcgcc aaacaagagc gccgctcgaa aagcgagtta tttcgcgaga
     1261 tgctccgttt ttatcagcgt taccgccagc agcgtgccca ggtagaggac cgctggctgg
     1321 aagagctcat tcaagaggtc aaggaagaag aggccaggca tcccacgagt caggaggaac
     1381 tcctaaagga agaagcggag ctcgcccagt acggcgctga gcaggccaaa aagctcggta
     1441 tcaagtctaa ggatatcaat cgcatcattt atgaatcccg caagcggcgg agagcttaga
     1501 gttgtcctcg acacgaacgt ttatatttcc gcctttgccc atcctgagcg gccgatctac
     1561 caagtctagc atcacgcgtt ggagcggcgt tatcagctct tgatttcttc agcgatagtg
     1621 aacgagcttg cggatgtact gcggaccgat tttcactggg aagaacgacg tcttcgccgc
     1681 cgaataaggc ttgtgacacg tgtggggacg atcatcaccc catatatcgc actcaacgtg
     1741 attcctgacg atcccgatga tgaccggatc ctcgaatgcg cggtggcagg aagggccaac
     1801 ctcattgtct caggcgatcg ccacctgcgc cgcctgcggg tctacgaagg aattcccatt
     1861 atcaggccaa tcgatttc
//
LOCUS       DASQSL010000501         1246 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_155070, whole genome shotgun sequence.
ACCESSION   DASQSL010000501 DASQSL010000000
VERSION     DASQSL010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1246
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155070"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(67..1086)
                     /gene="hflC"
                     /locus_tag="VE844_05055"
     CDS             complement(67..1086)
                     /gene="hflC"
                     /locus_tag="VE844_05055"
                     /inference="COORDINATES: protein motif:HMM:TIGR01932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HZC00739.1"
                     /translation="MRVLIVIAVLAIIGLIVLRQTVYVVDETEQVVITRFGEVRVVQT
                     TPGLSVKIPFVDVITRLDKRVLRIDAQPAALPDRDKQNLIIDLYARYRITDPVQFRKT
                     LQTETNARSRLADIVISTLRDRIALRDRFDIIGSSPSLDAQGAPVVDDEGITIVEARE
                     TRTEILNEVLEIVKQRTEGQEFGIEMIDVRIKRADFPESVADSIYTRMRAERNRIATR
                     FRAEGEEEDLKIRAGANREREVILAEAERQSSQIRGEGEAEAIRTLAQALNQDPDFFA
                     FRRSLEAYQKFLSQQDTIILSADAPLFRYLASPGAGQPEVRPVANPEDRPAGLPAADP
                     PPDQK"
BASE COUNT          254 a          348 c          366 g          278 t
ORIGIN      
        1 catttgaaga aacacagcaa tgagaggagg tgaaaagtat gtacgtctat aaagggccag
       61 aaaggactac ttctggtctg gcggagggtc ggcggcaggc agcccagcag gtcggtcttc
      121 cgggttggca acgggtctta cttctggttg gccggcaccg ggactggcta gataccggaa
      181 cagcggtgcg tcagcggaaa ggataatcgt gtcctgctga ctcaagaact tctggtaagc
      241 ctccaggctg cggcggaaag cgaaaaagtc cgggtcctgg tttagcgcct gggccagagt
      301 tctgatggcc tcggcctcgc cttcgcccct aatctggctg gattgccgtt ccgcttcagc
      361 caggattact tcgcgctccc ggttggcacc ggcgcggatt ttcaggtcct cttcctcgcc
      421 ctcagcccgg aaccgggtgg caatgcgatt gcgctcggcc ctcatgcggg tgtagatgct
      481 gtcggctacc gattccggga agtcggcccg cttgattctc acgtcgatca tctcaatgcc
      541 aaattcctgc ccctcagtcc gttgcttgac gatttctagg acttcattaa ggatttcggt
      601 gcgggtctct ctggcttcca caatggtgat tccttcgtcg tcaaccaccg gagcgccctg
      661 ggcgtccagg gatgggctgg acccgataat atcaaagcgg tcgcgcaagg caatgcggtc
      721 tcgcagggtg gagataacaa tgtcggccag acggctccgg gcgttggtct ctgtttgcag
      781 ggtcttgcgg aactggaccg ggtcggtgat gcggtagcgg gcataaaggt caataatcag
      841 gttctgcttg tcccggtcag gcagggccgc cggctgagca tcaatccgca agacgcgctt
      901 gtccagccgg gtgattacgt ccacaaaagg gatcttcacg ctcaagccgg gcgtggtctg
      961 cacaacgcgc acttcgccaa agcgagtaat aacgacctgc tcggtctcgt ccacaacata
     1021 aacggtctgg cgcaggacaa tcagaccaat tattgccagc accgctatta cgattaaaac
     1081 tctcatctag attctccata ccaccgctca ggttttaagg gctagggcca atcggcacag
     1141 gcgcaacttg cccctcttgg cctagaatca gcaccgattg agcctcgggt gataatacga
     1201 ttttggtgat cccggggagt acttcttcca tagcttccag gtagag
//
LOCUS       DASQSL010000502         1511 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_141184, whole genome shotgun sequence.
ACCESSION   DASQSL010000502 DASQSL010000000
VERSION     DASQSL010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1511
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141184"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..325
                     /locus_tag="VE844_05060"
     CDS             <1..325
                     /locus_tag="VE844_05060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00740.1"
                     /translation="DKNGERSYEVELYRLKGELLQRAEGRKQKAEIEAEAEAYFRQAL
                     EVARHQGAKSWELRTAMSLSRLWQRQGKKEEARKMLAEIYGWFTEGFDTSDLKEAKAM
                     LDSME"
     gene            432..848
                     /locus_tag="VE844_05065"
     CDS             432..848
                     /locus_tag="VE844_05065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00741.1"
                     /translation="MSTPIDTPAEEALTELAERFEHWRRTRPKGRARIPEDLWDQAVA
                     LSTVLSNGRVAQRLRLSPTDLRKQRIARQATSAIAGAETPPAFVDITPSLPWSTAVPG
                     ETEIELARPDGARMCIRARESTTPLVALVRMFLEAR"
     gene            848..1126
                     /gene="tnpB"
                     /locus_tag="VE844_05070"
     CDS             848..1126
                     /gene="tnpB"
                     /locus_tag="VE844_05070"
                     /inference="COORDINATES: protein motif:HMM:NF017528.4"
                     /note="TnpB, as the term is used for proteins encoded by
                     IS66 family insertion elements, is considered an accessory
                     protein, since TnpC, encoded by a neighboring gene, is a
                     DDE family transposase; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HZC00742.1"
                     /translation="MLQLTPQSRIFLAIEPVDFRAGIDRLAAFCRERLAQNPLEGAVY
                     VFRNRRSTALKLLVYDGQGFWLCYPAPVTGPIPMVAPRRDRGLALIRP"
     gene            complement(1202..>1511)
                     /locus_tag="VE844_05075"
     CDS             complement(1202..>1511)
                     /locus_tag="VE844_05075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008870863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00743.1"
                     /translation="GFQYLLNHWERLRQFLRVPGAPLDNNTLERALKLMIRQRRNSLF
                     YASPHSAYVASILTSVIATCARAGINALAYLVALQEHRSEVFRNPSAWLPWNYTEQMA
                     "
BASE COUNT          306 a          420 c          491 g          294 t
ORIGIN      
        1 ggacaaaaac ggggagcgta gctatgaggt ggagttgtat cgactcaagg gagagttgct
       61 tcagagggca gaaggcagaa agcagaaggc agaaattgaa gcggaggctg aggcctattt
      121 tcgccaggct cttgaggttg cccgccacca gggcgcgaag tcctgggaac tacgaacagc
      181 gatgagcctc agccgtctgt ggcagcgaca gggcaagaaa gaggaagccc gcaagatgtt
      241 ggcagaaatt tatggctggt tcaccgaagg cttcgatacg tcagacctga aggaggcaaa
      301 ggcgatgttg gacagcatgg agtgatggga agtaattgaa ttgtgtgctt ccggtgagcg
      361 tgcgtgacat ttgcaacgtt gtcgacctaa ggtagagacc catttcatga tctatctggg
      421 agatactacc gatgtcgaca ccgatcgata cgcctgccga ggaggcatta actgagttag
      481 ccgaacgctt tgagcattgg cgccgcaccc ggcccaaagg gcgcgcacgc attcccgaag
      541 acctctggga tcaggcagtc gccttaagca ccgtcttgtc caatgggcgg gttgcacagc
      601 gcctgcggtt aagccccacc gatctaagaa aacagcgtat tgcccgacag gcaacttcag
      661 caattgcggg cgccgagacc cctcctgcgt ttgtcgatat cacaccgtca ctgccttggt
      721 cgaccgctgt gccgggcgag acggagatcg agctcgcgcg gccggatggg gcgcggatgt
      781 gtatccgtgc tcgggagtca acgacgccgt tggtggccct ggtgcggatg tttctggagg
      841 cgcgctgatg ctgcagctga cgcctcaaag ccggatcttt ctcgccatcg agccggtcga
      901 tttccgcgcc gggattgacc ggctggctgc cttctgccgg gagcggctgg cgcaaaatcc
      961 cctggagggc gcggtctatg tgtttcgtaa ccggcggagc acggccctca aactgctggt
     1021 ctacgatggc cagggctttt ggctgtgcta ccctgcgcct gtcacagggc cgattccaat
     1081 ggtggccccg cgccgagacc gcggcctggc gcttatccgc ccgtgagctg cacatccttc
     1141 tctggaacgg ccatcccgag gccgccccta tggcggagga ctggcgccgg gttgcttagg
     1201 cctaggccat ctgctcggtg tagttccagg gcaaccaggc cgaagggtta cgaaagacct
     1261 ctgagcgatg ctcctgtaac gccaccagat aggcgagcgc attgatgccg gcccgcgcac
     1321 aggtggcgat cacgctggtg agtatactgg ctacgtaggc gctgtggggg ctcgcataga
     1381 agaggctgtt gcggcgctgg cggatcatca gcttcaaggc ccgctcgagg gtgttattat
     1441 caagcggtgc ccccggcacc cgcaagaatt gcctcagcct ctcccaatgg ttgaggagat
     1501 actgaaaccc t
//
LOCUS       DASQSL010000503         1458 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_194226, whole genome shotgun sequence.
ACCESSION   DASQSL010000503 DASQSL010000000
VERSION     DASQSL010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1458
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194226"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1381)
                     /locus_tag="VE844_05080"
     rRNA            complement(<1..1381)
                     /locus_tag="VE844_05080"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          271 a          483 c          366 g          338 t
ORIGIN      
        1 caaggcccgg gaacgtattc accgcagcgt tgctgatctg cgattactag cgactccgcc
       61 ttcatggggt cgagttgcag accccaatcc gaaccaggcg cgcttttttg ggattcgctc
      121 cccctcacgg gatcgcagcc ctctgtggcg cgcaatgtag catgtgtgca gccctggaca
      181 taagggccat gctgacttga cgtcatcccc accttcctcc gagttgtccc cggcagtccc
      241 cttagagtcc ccggcattac ccgctggcaa ctaagggcag gggttgcgct cgttgcggca
      301 cttaagccaa cacctcacgg cacgagctga cgacagccat gcagcacctg tgctagcccc
      361 ttacggacac gggctttcac ccgctttaac tagcatgtca aacccaggta aggttcttcg
      421 cgttgcatcg aattaagcca catgctccgc cgcttgtgcg ggtccccgtc aattcctttg
      481 agttttagcc ttgcggccgt actccccagg cggagtgctt aatgcgttag ctgcggcaca
      541 gagagggttg aagacctccc cacacctagc actcaacgtt tacggctggg actaccaggg
      601 tatctaatcc tgttcgctcc cccagctttc gctcctcagc gtcaggtaag gcccagaaag
      661 ccgccttcgc caccggtgtt cctcctgata tctgcgcatt tcaccgctac accaggaatt
      721 ccactttccc ctacctacct ctagctatcc cgtatcgaat ggcctctcgg ggttgagccc
      781 cgagctttca catccgacgt ggacggccgc ctacgagctc tttacgccca ataaatccgg
      841 acaacgcttg ccccctacgt attaccgcgg ctgctggcac gtagttggcc ggggcttctt
      901 ctgcaggtac cgtcaccgtg aggcttcgtc cctgctgaaa gaggtttaca acccgaaggc
      961 attcatccct cacgcggcgt cgctgcgtca ggctttcgcc cattgcgcaa gattccctgc
     1021 tgctgcctcc cgtaggagtc tgggccgtgt ctcagtccca gtgtggctgg ccacgctctc
     1081 acgccagcta tgcgtcaaag ccttggtagg ccgttacccc accaacaagc tgatacaccg
     1141 cgggctgatc cagaaccgcc ggagctttgc ctgctgcgtc atgcgacgct gcagggttat
     1201 ccggtattag cagcggtttc ccgctgttat cccagagtcc agggcacgtt gcccacgtgt
     1261 tactcacccg ttcgccactt tccaccacca ctccttacgg agcggtggct tctcgttcga
     1321 cttgcatgta ttaagcacgc cgccagcgtt cgtcctgagc caggatcaaa ctctccgtag
     1381 agatttgatg ctgttcagct cgaacaacta acgatcagaa gatcgaaagc gtcttgccga
     1441 atttattctg tggattac
//
LOCUS       DASQSL010000504         1058 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_181576, whole genome shotgun sequence.
ACCESSION   DASQSL010000504 DASQSL010000000
VERSION     DASQSL010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181576"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(262..588)
                     /locus_tag="VE844_05085"
     CDS             complement(262..588)
                     /locus_tag="VE844_05085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00744.1"
                     /translation="MTEEQPGDARTQAALNELQGLIKQHYPEATFTVTRSQDDPAAIH
                     LVTTVDAEDRGEVLDAVMERMMELQIAEELPIFVIPIRPRERMLAIRRAGAQSAQRKG
                     FQSPLL"
     gene            complement(585..986)
                     /locus_tag="VE844_05090"
     CDS             complement(585..986)
                     /locus_tag="VE844_05090"
                     /inference="COORDINATES: protein motif:HMM:NF017020.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEPN domain-containing protein"
                     /protein_id="HZC00745.1"
                     /translation="MIAPDYPFLDKAMESLIGAESEFLNSRYNNCANRCYYACFQAAI
                     VALQEAGIAPRGTTGQWSHAFVPAQFEGMLINRRKLYPTQLRGTLGHLYGLRQTADYD
                     EDPVTQTEANRALRRTRTFVQAMQERGGENR"
BASE COUNT          209 a          305 c          292 g          252 t
ORIGIN      
        1 cttcaagctg gcgtatcggc acaatctcct gcctgccagc gtatcgctct gtcccaacat
       61 ggaggagcat cctgagcggt ttgttggaga agacggcgtc cccaagggaa aaatcacgtt
      121 gccagtatga gggagcgtat tgcatagggt gccgggcggt gtgttaccgg cttcttcata
      181 ccgtattgct tatacttgcg tctgtaagct ggattacact gcggttgcct tgcgtacccg
      241 acacccaagc tcgttgccca tttacagcag tggtgactgg aaacccttcc gttgtgcgga
      301 ctgagcacca gcccggcgga ttgccagcat ccgctcccgg ggacggatcg ggataacaaa
      361 aatgggcagt tcctccgcaa tttgcagctc catcatccgc tccatcactg catctaacac
      421 ttccccgcga tcctccgcat cgacggtggt gaccaggtga atggcagccg gatcatcttg
      481 gcttcgcgtg acggtaaagg tagcctcagg gtagtgctgc ttgatgagcc cttgtaactc
      541 gttcagggct gcctgcgtcc tggcgtctcc gggttgttct tcggtcatct gttctcaccc
      601 cctcgttcct gcattgcctg cacaaaggtt cgcgtccgtc gtaacgcccg gttcgcctcg
      661 gtctgggtta ccgggtcctc atcataatct gccgtttgtc ggagcccgta gaggtgtccc
      721 aaggtgcccc gcaactgagt agggtaaagc ttgcgccggt tgatgagcat cccctcaaac
      781 tgggcgggga caaaggcgtg actccactgt cccgttgtcc cacggggtgc gatgccagct
      841 tcctgcaagg cgacgatggc agcctgaaag caggcataat aacaccgatt ggcgcagtta
      901 ttgtagcggc tgttcagaaa ctcactctcc gccccgataa ggctctccat cgccttatcc
      961 agaaaagggt agtcaggggc aatcatagcg gtattatacc acagaaggca gggatgctgc
     1021 ggaaatcgtt atgattccta gtctctcaca ttatttca
//
LOCUS       DASQSL010000505         1704 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_141217, whole genome shotgun sequence.
ACCESSION   DASQSL010000505 DASQSL010000000
VERSION     DASQSL010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141217"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            222..1604
                     /locus_tag="VE844_05095"
     CDS             222..1604
                     /locus_tag="VE844_05095"
                     /inference="COORDINATES: protein motif:HMM:NF013753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00746.1"
                     /translation="MSVQITVPITTAVIEANADCKMSGRYEDGALVITIDTQHQNHHQ
                     RLGIPKRTPLYWGKAYEYEVQELSALSWPIRYRVLAREGYYLDEEGKRVYFSTQTSGV
                     DSRRGVSEVLMRAAVVLLVIAGMGYRRVEWLLGVLFHVAVSKSSLQRWVREVAAHLPS
                     GDEIIERLHRQAPITEGHLDELFPRGLHHCVLVMKDEHGRILATEAVDKRDEESVKPF
                     LKRFQRLGISFHAFYIDGCKAYYNAIRAVFGQATLIQYDYFHILQNAWRHLRKWAVAH
                     RRRLKKRAHAVTTPWYKRKLEALAKDLWKHRFLLFKAEKRLTPAERQTLYGLLEADPK
                     VGRLRDFLGGIWRIFEDSQDESQAQEALEALKRRPLDPHCSKPFEKVLNFLEEHFAWM
                     TTFLRHQHVQRNSLAETGMRVLRRLEIEHDGFRSEKGREDFLRIYQAIRYLGWSIYDP
                     PDLSPRPAPG"
BASE COUNT          379 a          467 c          499 g          359 t
ORIGIN      
        1 gagcaaatgt tccgtaatac acaattacgg ccatggtggc gcgggtttca ccctgtcttg
       61 gggatgtgct gaggatgttt tagagcttgc gaagggagtc ttcccggcaa ttaccgggtg
      121 tgtcccactt atccaggacc gaggtgaccc tagcgggttg atttcattga aggatcgtgg
      181 tttcctccaa gggtgtattc atagagtgag gtcacgggca catgtctgta cagataaccg
      241 ttccgatcac caccgcggtc attgaggcaa acgccgattg taagatgagc ggccgctatg
      301 aagatggggc gttggtcatc acgatcgata cgcagcacca aaaccatcac cagcgtcttg
      361 gcattcccaa gcgtaccccc ctttactggg gaaaagcgta tgaatatgag gtacaggaac
      421 tgagcgcctt gtcttggcca attcggtatc gagtgctggc gcgcgagggg tactacctcg
      481 atgaggaagg caagcgtgtc tatttcagca cccaaacgag cggagtggac agccgccgcg
      541 gggtatcaga ggtgttgatg cgcgccgcag tggtgctgct ggtgattgca ggcatgggtt
      601 accggcgggt tgagtggctg ctgggggtgc tgtttcatgt ggcagtctcg aaatcttctt
      661 tgcagcgctg ggtcagggaa gtggcagccc acctgccaag tggagacgag atcatcgagc
      721 gcttgcacag gcaagccccc atcaccgagg gccacttgga cgaactcttt cctcgcggct
      781 tgcatcactg tgtgttggtg atgaaggacg agcatgggcg gattttggcc actgaggcgg
      841 tcgataagcg tgatgaggag agtgtcaagc cgtttttgaa gcgatttcag cggcttggga
      901 tctcgttcca tgccttctac atcgatgggt gcaaggccta ctataacgcc atccgagcgg
      961 tgtttgggca ggcgaccctg atccagtatg actacttcca tatcctccag aatgcctggc
     1021 ggcatcttcg caagtgggcg gtagcccacc ggcgcagact gaaaaagcgc gcccacgcgg
     1081 tcaccacccc ctggtacaag agaaaactcg aagcgctggc caaggacctc tggaagcatc
     1141 gctttctcct cttcaaggcc gagaaacggc tcacgcccgc ggagcgacaa accctctatg
     1201 gcctcttgga agccgatccc aaggtcggtc gactgcggga cttcctaggt ggcatctggc
     1261 gcatctttga ggacagccaa gacgagagcc aagcccagga ggctctggaa gcccttaagc
     1321 gtcgaccact cgatccccac tgttcgaagc cctttgagaa ggtgctgaat ttcttggaag
     1381 agcacttcgc ctggatgacc accttcttgc gccaccaaca tgtccagcgt aattcactcg
     1441 cagagaccgg tatgcgagtg cttcggcgac tcgagatcga acacgatggc ttccgttccg
     1501 agaagggacg cgaagacttc ttacgcatct atcaggctat cagatacctt ggctggtcca
     1561 tctacgatcc gcccgattta agccccagac ctgctcctgg ataagtggga cacacccaaa
     1621 aaaagaccct ctacgacccc aaacagaagg aggaacgtgt ccaacggcaa cgggctgcct
     1681 acaccgagga gctccccacg ctga
//
LOCUS       DASQSL010000506         1164 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_4407, whole genome shotgun sequence.
ACCESSION   DASQSL010000506 DASQSL010000000
VERSION     DASQSL010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1164
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4407"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            202..>1164
                     /locus_tag="VE844_05100"
     CDS             202..>1164
                     /locus_tag="VE844_05100"
                     /inference="COORDINATES: protein motif:HMM:NF033550.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3 family transposase"
                     /protein_id="HZC00747.1"
                     /translation="MDFQCIETLLGLPEFRVTGQIIRPHGLDLHLERRETSLVCPHCQ
                     GCCARIKEGRDRCIRDLPILDRPVTLWLHLRRFKCSDGPARPWEKRETFGDRVKWTKR
                     LYDQVRQEFLHGCPCQELASRYGLSARTGFRWTFEKSRGGRPRQLDRALGIDEYSRRK
                     GHRYNTIIVDLDSGRPITTCKGRRVKDVVAWFKSRPQAERDRVEVVVLDMSKSFFSAI
                     QEVFGDQVQVIDRFHGVQHAVSAVDTVLRSVQKQLELDESNELKKRRRRWLKSANQLN
                     VDELIARADWRRRFPELREVIDWVQDLRTWFERKYDKPAREALLK"
BASE COUNT          268 a          293 c          361 g          242 t
ORIGIN      
        1 ggagaaggtg cgcacacggt cttaaatatc cgaaaacgca taggaaccct aaaacgcgag
       61 ggagagactc ctcggctctt cgccatcttt gaggccagca tatgagattg ataataggta
      121 agctagagcg ggtattgaca ggcacaggat tcctcacaaa atactggaaa caccaactgt
      181 ccagacggag gaaccctgcg catggatttc cagtgtatcg aaaccttgct cgggctgcca
      241 gaattccggg tgaccggcca aatcatccga ccccacgggt tggacttgca cctcgaacgc
      301 cgagagacgt ccctcgtctg tccccactgc caagggtgtt gtgcgcggat caaagagggc
      361 cgagaccgat gtattcgtga cctgcccatc ttggatcgac cggtcacttt atggctgcac
      421 ctcagacggt ttaagtgctc ggatggtccc gctcggccct gggagaaaag ggagacgttt
      481 ggcgaccggg tgaaatggac caagcggctt tacgatcaag tgcgtcagga atttcttcac
      541 ggttgcccat gtcaagaact ggcgagtcgc tatggcctct cggcgcgcac ggggtttcgc
      601 tggacgtttg aaaaaagccg gggtgggcgg ccaaggcagc tagatcgcgc cttagggatt
      661 gatgaatact ccaggcgcaa ggggcatcgt tacaatacga tcatcgtgga cttagacagc
      721 ggtcggccga tcaccacctg taaaggccga cgggttaagg acgtggtggc gtggtttaaa
      781 agtcgcccgc aagcggaacg ggaccgagtc gaagtcgtgg tgttggatat gtcgaagtcg
      841 tttttttcgg ccatccagga agtttttggc gatcaggtcc aagtcattga ccggttccat
      901 ggggtccagc acgccgtgag tgcggtcgat accgtgttgc ggtcggtgca aaagcaactt
      961 gagctggacg agtcgaacga gctgaaaaaa cggcgccgac gctggctgaa atcagctaat
     1021 caactcaatg tcgacgagtt gatcgcgcgg gcggattggc gtcggcgttt tcccgagctc
     1081 cgcgaagtca ttgattgggt gcaggacttg aggacctggt ttgagcgcaa gtatgacaag
     1141 ccggcccgcg aggccctttt gaaa
//
LOCUS       DASQSL010000507         1283 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_72621, whole genome shotgun sequence.
ACCESSION   DASQSL010000507 DASQSL010000000
VERSION     DASQSL010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1283
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72621"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1201)
                     /locus_tag="VE844_05105"
     rRNA            complement(<1..1201)
                     /locus_tag="VE844_05105"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          186 a          436 c          344 g          317 t
ORIGIN      
        1 ggcttcgccg gcctagggaa cgctccgcta ccacgcgccc tttcgggcgc atccacagct
       61 tcggcacgtg gcttgagccc cgttacattt tcgccgcggg acagctgata gaccagtgag
      121 ctattacgct ttctttaaag gatggctgct tctaatccaa cctcctggtt gttgtggccg
      181 tcccacatgc tttcccactt agccatcatt tgggggcctt agccggcggt ctgggctgtt
      241 tccctctcga cgacggacct tagcacccgc cgtctgtctg ccgggctgca ctcatcggca
      301 ttcggagttc ggtagggttt ggtagggctt tgggcccccc tagcccttcc ggtgctctac
      361 ctccgacggt gaccgcctga cgatctacct caatagattt cgcggagaac cagctatttc
      421 cgggtttgat tggcctttca cccctagcca cagctcatcc ccgacttttt caacaggcgt
      481 gggttcggcc ctccagtgcg tgttaccgca ccttcagcct ggccatggct agatcactcg
      541 gtttcgggtc ttctgccggc gactgaacgc gctcttcgca ctcgctttcg ctgcgccttc
      601 gcctcgcggc tttagcttgc tgccaacaga aactcgcgga cccattatac aaaaggtacg
      661 ccgtcacggg acaagcccgc tccgactgct tgtaagcgtc cggtttcagg tctctttcac
      721 tcccctcgtc ggggtgcttt tcacctttcc ctcacggtac tcgtgcacta tcggtcgccg
      781 aggagtattt aggcttggag ggtggtcccc ccgtgttcgg acagggtttc acgtgccccg
      841 ccctactcga ggatccaatg ccaagctacg cctacggggc tgtcacccgc tttggctggc
      901 cgttccaggc cattcgactt gaagcagcag ggccactggc ctgctcccct ttcgctcgcc
      961 gctactcggg gaatctcgtt tgatgtcttt tcctccgggt actgagatgt ttcagttccc
     1021 cgggttcgcc tcccggccct atggattcag gccgggatct cccatgcggg aggggtttcc
     1081 ccattcggac acccgcggat caacgatcgc tcgcatctcc ccgcggcttt tcgcagcgtg
     1141 ccacgtcctt cttcgcctct cgacgccaag gcatccgtca ggagccctta ttcgcttgat
     1201 cgtttctcag cttaacccat gcgcggtgac gaggccgccg gccaggcgaa cctggtcgga
     1261 cgtacgcgtc cacacgcctg ggc
//
LOCUS       DASQSL010000508         1072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_18097, whole genome shotgun sequence.
ACCESSION   DASQSL010000508 DASQSL010000000
VERSION     DASQSL010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18097"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            205..>1072
                     /locus_tag="VE844_05110"
     rRNA            205..>1072
                     /locus_tag="VE844_05110"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          255 a          263 c          364 g          190 t
ORIGIN      
        1 gtaagcaaac gcagtttcgc tgaagcgccg ttctgttctg cagagcggtg cggaggcgga
       61 cagcccgtcg agtgtcagcg gatggtttac aaccatccac caacacaagt acgaaacaac
      121 gcaagagcca agtcagcagg cgctcgcgtt aaacagttgc gatccgccga cgcgcgcaag
      181 cgcggaggtg gaaaacagcg aatttaacat gagagtttga tcctggctca gaatcaacgc
      241 tggcggcgtg cctaacacat gcaagtcgaa cgcgaaaggg gcttcggccc tgagtagagt
      301 ggcgaacggg tgagtaacac gtgggtgatc tacctctgag tgggggataa cgttccgaaa
      361 ggagcgctaa taccgcatga cgtcctgggt ttgaagacct ggacaccaaa gtcggggacc
      421 gcaaggcctg gtgcttggag aggagcccgc gcctgattag ctagttggtg aggtcatggc
      481 tcaccaaggc gacgatcagt agccggcctg agagggcgga cggccacact gggactgaga
      541 cacggcccag actcctacgg gaggcagcag tggggaattg ttcacaatgg gcgcaagcct
      601 gatgacgcaa cgccgcgtgg aggatgaagg tcttcggatt gtaaactcct gttgcccggg
      661 acgaatggct ccgacctaac acgtcggagt gtgacggtac cgggtgagga agccccggct
      721 aactctgtgc cagcagccgc ggtaatacag agggggcaag cgttgttcgg aattactggg
      781 cgtaaagggc gcgtaggcgg tcgcctcagt cggacgtgaa atccccaagc ttaacttggg
      841 aactgcgtcc gatactgggt gactcgagtt cgggagagga atgtggaatt ccaggtgtag
      901 cggtgaaatg cgtagatatc tggaggaaca tcggtggcga aggcggcatc ctggaccggc
      961 attgacgctg aggagcgaaa gccaggggag caaacgggat tagatacccc ggtagtcctg
     1021 gccctaaacg atgaatgctt ggtgtggcgg gtatcgatcc ctgccgtgcc ga
//
LOCUS       DASQSL010000509         4302 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_72653, whole genome shotgun sequence.
ACCESSION   DASQSL010000509 DASQSL010000000
VERSION     DASQSL010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4302
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72653"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..269)
                     /locus_tag="VE844_05115"
     CDS             complement(<1..269)
                     /locus_tag="VE844_05115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00748.1"
                     /translation="MRYISHALLKSSNFNVLNINEFRLLTYNKAPFVKCPDVLSLMAL
                     IDDPGELLPHLPALRPPRLLDLAAGVLMGLMNTLHIQDELVTPHN"
     gene            408..1649
                     /locus_tag="VE844_05120"
     CDS             408..1649
                     /locus_tag="VE844_05120"
                     /inference="COORDINATES: protein motif:HMM:NF033550.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3 family transposase"
                     /protein_id="HZC00749.1"
                     /translation="MTIPIEQLLNIPGIRVLSVKYDEHKVTCQIESTQSYSICHTCGR
                     KATEFHEHGQELELRHLPLCGRQVILRLRPKRYRCLYCEGAVTTTEGADWYDAKAGCS
                     KAYAEFLLLELVNGTLQDVAKKHGVTYDVVRGVLKRYVKGDVDWRQLKVLRILGVDEI
                     SLLKGHSDFVTLVSAQDEQGNPIVLAVLKGREKKTLVDFLKTIPRRLQETITEVCTDL
                     YDGFIHAVEEVLPQAKIVADRFHIAKLYRAAVDQLRKIELKALKGVLTKEAYAGLKGV
                     LWALRKRRAHLAPEEHALLDRLFEASPVLRKAYNLREKLTRIFNKKHSKKSGRRAIRR
                     WMAQVKDSGLECFDTFLSTLEKRMDIITNYFISRSSSGWVEGLNNKIKVLKRRAYGVK
                     NLGNLFRRIWLDLKGYEAFAH"
     gene            complement(1844..3385)
                     /locus_tag="VE844_05125"
     CDS             complement(1844..3385)
                     /locus_tag="VE844_05125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012623483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HZC00750.1"
                     /translation="MDAELQTYPDFEIVPEDWKRTPPSVQQMILRLMQRLASLEREVS
                     TLRAENERLREQTRRSSRNSSQPSSGDAPSTPPRQRRKPSGKSRGAQPGHEGHQRKLY
                     PVEQCRNVTDHRPSECRACGMVLSGDDPHPYRHQVIELPEVQPRVDEYRLHQLSCPHC
                     GEMTRAQLPAEVPASGYGPRLVATVGLLSGPYRQSERQTQQALCDFYQVEVALGTINA
                     LRQEVSQAVAEPVTEAAEFAQAQEVAHADETGWAQGNSDGNNPQRRKAWLWVVVTSWV
                     TVFQVHLSRGQAAAKELLGEFAGYLVTDRWSGYGWWPLSRRQLCWAHLIREFQKIAER
                     GEESQRIGEGLLEQARRLFKWWHRIRDGTLTRAAFALAAAEIRAEVQRWLAEGTAYVP
                     AWGEKSARARTARTCRELLKVEEALWLFVSVEGIEPTNNAAERALRPAVIWRRISFGT
                     QSAEGSQFVARMLTVMLTLRAQQRPVLEYLTTACQAVRHGLPAPSLLPNLSLLEPEQH
                     FAIAA"
     gene            3556..4080
                     /locus_tag="VE844_05130"
     CDS             3556..4080
                     /locus_tag="VE844_05130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006894151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HZC00751.1"
                     /translation="MAKSERNIEKKEEKTLAPRTGGLVPFEEVDRWFDEINRRFDEFF
                     SRRWLSPFERLLPGLPELRAPFEGRMPRVDMIDRDTDIVIRAELPGIAKEDLNVSMTD
                     DAVTLRASIRHEEKEEKGEYYRREMSRGEFQRTLRLPAAVKGEQAKATFKDGILELVL
                     PKMEQAKRKTIRIE"
BASE COUNT          999 a         1221 c         1178 g          904 t
ORIGIN      
        1 tgattatgtg gtgttactaa ctcatcttga atgtgcaacg tattcatcag ccccatcagg
       61 acgccagcgg ctaggtcaag cagccgcggt ggtcgaagtg ctgggagatg tggcaggagc
      121 tcgcccgggt catcaatcag agccatgagg gatagtacat cggggcattt gacgaaaggg
      181 gctttattgt acgttagcaa ccgaaactca ttgatattca atacgttaaa attgctcgat
      241 tttaacaatg cgtgtgagat ataacgcaat agcaactcat tgaatatatt gttagggtct
      301 ttgggaattg ctgtgggatg ccccaatata ttgggtcttt gggaattgca gtgggatgcc
      361 ccaatatatt gtggtcattg aatcaaaatc atcccaagga gcaccccgtg acgataccga
      421 tcgagcaact gttgaacatc cccggaattc gcgtgctgag tgtcaagtat gacgagcaca
      481 aggtcacgtg tcagatcgaa tcaactcaga gctattcaat atgtcacacg tgtggccgga
      541 aagccacgga attccacgaa cacgggcagg aactggaact gcgtcatcta ccgctgtgtg
      601 gtcggcaagt gattttgcgg ttgcgcccca agcgctatcg ttgtctctat tgcgagggcg
      661 ctgtgaccac caccgagggg gcggattggt acgatgccaa agccggttgt agcaaagcct
      721 acgcggaatt tctcctactc gaactggtca acggcaccct tcaagacgtc gccaagaagc
      781 acggtgttac ttatgatgtg gtgcgcggcg tgctcaaacg ctacgtcaag ggcgacgtcg
      841 attggcgcca actcaaagtt ctacgtatcc tgggagtgga tgagatctcg ctgctcaaag
      901 ggcattccga ttttgtcacc ctcgtcagtg cccaagacga gcaaggaaat cccatcgtgc
      961 tggcggtgct caaaggacgc gagaaaaaga cgctggtcga tttcctgaag accatcccca
     1021 ggcggctgca agagacgatc acagaagtgt gcaccgacct ctatgacggc ttcatccacg
     1081 ccgtggaaga ggtgctgccc caggctaaga tcgtcgcgga tcgcttccac attgccaaac
     1141 tctatcgcgc ggccgttgac caattgcgca agatcgagct gaaagcgctc aaaggggtcc
     1201 tcacgaaaga ggcatacgcc ggactgaaag gcgtgctgtg ggccttgcga aagcggcgcg
     1261 cgcacctggc gccggaagaa catgcgctcc tcgatcggct gtttgaggct tcccccgtgc
     1321 tgcgtaaggc gtataacctg cgtgaaaaac tgacccgaat cttcaacaaa aaacattcca
     1381 agaaatccgg ccgccgagcg atccgccggt ggatggcaca ggtcaaagac agcggtttgg
     1441 agtgctttga cacattcctc agcaccttgg aaaagcggat ggacattatc accaattact
     1501 tcatcagtcg ttcatcgagc ggctgggtcg aaggattgaa caacaaaatc aaggtgctca
     1561 agcgccgcgc ttatggggtt aaaaatttgg gcaacctgtt tcggcggatc tggttggacc
     1621 tgaaaggtta tgaagccttc gcacattaat gaaaacacaa gatgttgtgg tgttaccacg
     1681 gtaattccca aagacccgat attcacctgc tgcgtatggg acgtcacccc cctttacctc
     1741 caatttatcc acgggacatc agcacccccg atatgggaca tcagcacccc aaaatatggg
     1801 acatcagcac cccaacaaat atcgtaaccg ttcacggggg agcttaagca gcaatagcaa
     1861 aatgttgctc tggttccaat agagagaggt ttggcagcaa cgagggggca ggcaggccgt
     1921 gccgtaccgc ctgacaggct gtggtcagat actccagcac cggtcgttgc tgcgcgcgca
     1981 aagtaagcat gacggtcagc atccgggcaa cgaactggct gccctcagca ctctgcgtcc
     2041 cgaagctgat tcgccgccag atcaccgccg ggcgcaaggc gcgctcggcc gcgttgttgg
     2101 tcggctcgat accttccaca ctcacaaaca gccagagagc ttcttcgact ttaagcaact
     2161 cgcgacacgt ccgtgcggtt cgcgcccggg cagacttctc cccccacgct ggcacgtaag
     2221 ccgtaccttc tgcaagccac cgctggacct cagcacggat ctcggccgcg gctaacgcga
     2281 acgccgcccg cgtcaaagtt ccatcgcgga tacgatgcca ccacttaaac aatcggcggg
     2341 cttgctccag caatccttcg ccgatccgtt gcgattcctc accgcgttcg gcgatctttt
     2401 gaaactcgcg gatcagatgc gcccagcaca actgccgtcg tgagagcggc caccacccgt
     2461 agccactcca ccgatcggtc accaggtaac cggcaaactc gcccagcaat tctttggccg
     2521 ccgcctgacc acggctcaga tgcacctgaa agaccgtcac ccaactcgtc accactaccc
     2581 acaaccaggc tttgcgccgc tgcggattgt tgccatcgct gttgccttgc gcccagcccg
     2641 tctcatccgc gtgcgctacc tcctgggcct gtgcaaactc agcagcctcc gtcaccggct
     2701 cagccactgc ctgagagact tcctgtcgca gcgcgttgat cgttcccaag gccacttcga
     2761 cctgatagaa gtcacacagc gcctgttgcg tttgccgttc gctctgacgg taggggccac
     2821 tgagcaatcc gacggtcgcc accagccgcg gcccgtaacc actcgcaggt acctcagcag
     2881 gcaactgcgc ccgcgtcatc tcaccgcagt gcggacaact cagttgatgc aaccgatatt
     2941 catccacccg cggttggact tccggcaact cgattacctg atgccgataa gggtgtgggt
     3001 cgtcaccgga caagaccatc ccgcaagcgc ggcactcact gggacggtgg tcggtgacgt
     3061 tacgacactg ctcgaccgga tagagcttcc gctgatgccc ctcgtggccg ggctgagcac
     3121 cgcgcgactt gccactcggc tttcgtcgct gccggggcgg cgtactcgga gcatctcccg
     3181 aggacggttg cgaactgttg cgcgaagagc ggcgagtctg ctctcggagc cgctcattct
     3241 cagcgcgcaa cgtgctgact tctcgttcca gcgaggccaa ccgctgcatc aggcgcaaaa
     3301 tcatctgctg gacactgggc ggtgtgcgct tccagtcttc gggcacaatc tcaaaatcgg
     3361 gataggtctg cagttcagca tccattgatc taaaactacc aaatcagatg gggtttttca
     3421 cggtgttttt ctaccccgtg aacggttaca atatttccac gtgccgctct ttcatccggc
     3481 ccgcagttac cgaaaccgat gagcggtgtt tttagatata ctgtttgaat ttagcctaca
     3541 agagagggta gtctcatggc aaaaagcgag agaaatatcg agaaaaaaga ggaaaagacc
     3601 ttggccccac ggaccggggg attagtcccc tttgaggagg tcgaccggtg gttcgatgag
     3661 atcaaccgta ggttcgatga attcttttca cgccggtggt tgagtccctt cgagcggctg
     3721 ctgccgggcc tacctgaact gcgggccccg tttgaggggc ggatgccgag ggtagacatg
     3781 atcgaccgcg ataccgatat cgtaattcgg gcggaactgc cggggatcgc caaggaagat
     3841 ttgaatgtgt cgatgaccga tgacgctgtg acccttcggg cgagcatacg gcatgaggag
     3901 aaagaagaga aaggggaata ttatcgccgc gagatgagcc gcggcgagtt tcaacggacc
     3961 ctacgcctgc cggcagcggt gaagggcgaa caagccaagg ccacgttcaa ggatggcatc
     4021 ttggaactgg tgctacccaa gatggaacag gccaaacgta agacgatcag gattgaataa
     4081 gtcccgcttt atctctgaat ctctgaacat taggtggtgc ggcgtgtata ccaaacgccg
     4141 cacccagcag cttcaacaat caattatatc aattatcggc ccgtgacctt ttggtcagcg
     4201 agcttccccc gcagttgtaa atttaccaca gagagaacgc ctcaatagag gcccgctttt
     4261 tttttaggat ctaggttggg atctgtcgcc tataggtatc ag
//
LOCUS       DASQSL010000510         2729 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_18109, whole genome shotgun sequence.
ACCESSION   DASQSL010000510 DASQSL010000000
VERSION     DASQSL010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2729
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18109"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            246..1673
                     /locus_tag="VE844_05135"
     CDS             246..1673
                     /locus_tag="VE844_05135"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00752.1"
                     /translation="MKKNAPTILQRRQQRKARHTANRQAQKRLRRLSDTPKSRGEALV
                     CELFKTIHHFFPDLFDQLRQMEDCRGKSDYTLAEIVLAGIALFLFQQGSRNALNNKRQ
                     EGRFRTHYQRLFKLRLPHLDTVHRVLCRLAEDQLEQLKQGLVKTLLEKKVLHKYRFLR
                     RWFVVAIDATGVMSFAEKHCEQCLHQTSKTGKITYFHTVLEAKLITPTGLAISLATEW
                     IANPPGEYDKQDCERKAFERLAAQLKQRYPRLPLCLTADGLYPYHGFFALCQANDWAF
                     IVTFKDGNLPSVWEEVQALQALNPLQHRHERRYRGQTRIEHTFHWLNDLDYRGHRLHW
                     LECVETLSHPPSVNQPTPSRFVHLTNLEVTATTVALLSRTGRGRWTIENEGFNTQKHH
                     GYALQHKYARVSWQAAKNYYHCLQIGHLINQLMILSTTFQTYLQGKMTCRHLGQAMMA
                     FLLYGHLRRHMLDRLAQRRCQIRLI"
     gene            1962..2432
                     /locus_tag="VE844_05140"
     CDS             1962..2432
                     /locus_tag="VE844_05140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00753.1"
                     /translation="MNPRGRTWLLLGAFISLAIAVLHVIIVFIGPPAYSFFGGERLAR
                     LAAAGSSSPAVMTLLLALVHGVFGIYGLSGAGLIRRLPLLFFVLLIIGGLYAFRGLSI
                     VNQTLQILADPGSLPLRVLFYSLVSLITGCAYIVGTVKGLGWLQDPEDPSKLST"
     gene            2479..>2729
                     /locus_tag="VE844_05145"
     CDS             2479..>2729
                     /locus_tag="VE844_05145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013031452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HZC00754.1"
                     /translation="MVEALDPEGRRLPIKLDSTSNGEFVPQPLGAQVRAANELAYACA
                     SNAAKRLSLPRRRFLKSICGAAAALLAMNEAYARFGKTGG"
BASE COUNT          607 a          814 c          697 g          611 t
ORIGIN      
        1 gcccgtccat cctactctcc caatcgtaag agcgtaaaag cgtctacgta ccgaattggc
       61 tggcaaccct ggaggtcaag acaatcccaa caattcagaa cattgataaa aactaatata
      121 gttcaattag ttaaagcata acctaaaaaa tatttttccg gctatttgac gcggcgctga
      181 ggggcagcat tgaggtgctg aaggcttcat cataggactt ttaggaatca tcttaggagc
      241 ccctcatgaa gaaaaacgcc cctactatcc ttcagcgccg acaacaaaga aaagcacgcc
      301 acacggccaa ccgtcaagct cagaaacgct taaggcgctt atccgatacc cccaagagcc
      361 ggggtgaagc cctggtctgt gagctgttca agaccatcca tcattttttc ccggatctgt
      421 ttgaccagtt gcggcagatg gaagattgcc gggggaagtc ggactatacg ctggcggaga
      481 tcgtgctggc ggggatagcg ctgtttctct ttcagcaagg ctcgcgcaac gccctcaata
      541 acaagcgtca ggaagggaga tttaggaccc attaccagcg gctgttcaag ttacggctac
      601 cgcacttgga cacggtacac cgggtgctat gtcggctggc cgaggaccaa ttggaacagc
      661 ttaagcaggg gttggtgaaa acgctgctag agaagaaggt gctgcataag taccgcttcc
      721 tgcggcggtg gtttgtggtg gcgatcgatg ccacgggggt gatgagcttt gccgagaagc
      781 attgtgagca gtgtctgcat cagacctcaa agacgggcaa aatcacgtat tttcacacgg
      841 tgttggaggc caagctgatc acccccacgg ggttagctat ctcgctggcc accgaatgga
      901 tcgccaatcc cccgggcgag tatgacaagc aggactgcga acgtaaagcc ttcgagcgcc
      961 tggcggccca gctcaagcag cgctatccac gcttgccgct ctgcctcacc gccgatgggc
     1021 tctaccccta ccacggcttc ttcgcgcttt gtcaggccaa cgactgggcg tttatcgtca
     1081 ccttcaagga cggcaatctg cctagcgtct gggaggaggt gcaggcattg caggcactca
     1141 accccctgca acaccgccac gagcggcgct atcgaggaca gacgcggatt gagcatacct
     1201 ttcactggct caatgacctc gactatcgcg gccatcggct ccactggttg gaatgtgttg
     1261 agacactcag ccacccccca tcggtcaacc aacccacccc gagccgcttt gtgcatctga
     1321 ctaatttgga agtcaccgcc accaccgttg ccctgctcag ccgcaccggc cgggggcgct
     1381 ggacgatcga aaacgaaggg tttaataccc agaagcatca cggctatgcc ctgcagcaca
     1441 agtatgctcg cgtcagctgg caggcagcaa aaaactatta tcactgccta caaatcggcc
     1501 atctgatcaa tcagctcatg atcctgagca ccacctttca gacctacctc cagggcaaaa
     1561 tgacctgccg tcacctcggg caggcgatga tggcgttcct cctctatggc catctccgcc
     1621 gccacatgct cgaccgactg gcccaacggc gctgccagat ccgcttgatt tagtcccacc
     1681 aggagatcgc ctgctccgca attcaggcgc cacccattat ccccaaagaa ggtgaacctc
     1741 atccaaaccc cacaatttgc atgttatccc ttcttcacgc cagccaatct tactgacgtt
     1801 gcctggctgg aggaaaacgg gataattgtg cctatgattg atcccctgct ttccctaact
     1861 caagataaga aggacgctct gaattgctga gcttgctacc gctgctggaa tcctgccatc
     1921 agcaatgcta tgcttaatac acttttggca agggaattct catgaaccca cgcggtagaa
     1981 cctggcttct cctaggggca ttcataagcc tggccattgc tgttctccac gtcattatcg
     2041 tttttatcgg tcctcccgcc tatagcttct tcggtggtga acggttagcc cggctggcag
     2101 ccgccggttc gtcttccccg gcggtgatga cactcctttt ggctctggtg cacggggtct
     2161 ttggtatcta cgggctctcc ggagcaggtc tcatccgccg cctacccctc ctcttcttcg
     2221 tcttgctcat catcggcggc ctctatgcct tccggggact ctccattgtc aatcagacct
     2281 tacaaatact cgctgatccg ggatctttac ccctgcgcgt cctgttttac tcgctggtgt
     2341 ccttgatcac cggttgcgcc tatatcgtgg ggacagtgaa aggcttaggc tggcttcagg
     2401 atccagaaga tccaagcaag ctttcgacgt gatcctttgt taaacggccg tttcgaactg
     2461 ggctataaat attataccat ggttgaagca cttgaccccg aaggccggcg cctacccatc
     2521 aagctcgata gtacctcaaa cggcgagttt gtcccccagc cgctgggagc ccaggtacga
     2581 gcggccaacg agcttgccta cgcgtgtgca agtaatgccg ccaaacggct tagtctcccc
     2641 cgccgcaggt ttcttaaatc gatctgcgga gcggcggcgg cgctgctggc gatgaacgag
     2701 gcttatgccc gctttggtaa aaccggtgg
//
LOCUS       DASQSL010000511         1084 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_127366, whole genome shotgun sequence.
ACCESSION   DASQSL010000511 DASQSL010000000
VERSION     DASQSL010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127366"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            82..693
                     /locus_tag="VE844_05150"
     CDS             82..693
                     /locus_tag="VE844_05150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007113980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1326 domain-containing protein"
                     /protein_id="HZC00755.1"
                     /translation="MTTTTQWNLSGNYFESCNCEVACPCVFLSAPTSGECTVLVGWHI
                     DQGSFGDINLNGLNAALAVHSPGNMVEVQWKVALYLDERASEQQKNALIQIFGGQAGG
                     HFGRIAEHIGEVVGVKSAAIDYQAEGKRRSLRIADVAAAEIEAIDGVAGSEVTISGNP
                     LSVVPGEPMVVARSSRLDYRDHGMNWELSNRNGFFSPFTYQGP"
     gene            706..>1084
                     /locus_tag="VE844_05155"
     CDS             706..>1084
                     /locus_tag="VE844_05155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017954044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2182 domain-containing protein"
                     /protein_id="HZC00756.1"
                     /translation="MQVASSLEAVLRRDRVIVLAGLIGVTVLAWAYMFYLAWDMQRSM
                     SVDSMEMGMSMASAQLRPWGAVDFALMFIMWAVMMTAMMVPTAAPMILTFATINRRRR
                     EQEQPFVPTGVFISGYLIVWSGFA"
BASE COUNT          223 a          273 c          344 g          244 t
ORIGIN      
        1 ttctaggcat cccaaagggt cgtatgtgca agggaattgg gttggcctag gaaatccgag
       61 cttgattgag gagacgtcaa catgaccaca actacgcaat ggaatctcag tggcaactac
      121 tttgagagct gtaactgcga ggtagcttgc ccctgcgttt tcctgagtgc tcctactagt
      181 ggagagtgta cggttctagt cgggtggcac attgaccagg gcagcttcgg ggatatcaac
      241 ctgaacgggc ttaatgcggc cttagcagtg cactctcccg ggaacatggt cgaggtgcag
      301 tggaaggtgg ccctctatct ggacgaacgg gccagtgaac agcagaaaaa tgccttgatc
      361 cagatttttg gtggccaggc cgggggccac ttcggcagga ttgctgagca cataggtgag
      421 gtggtgggag tcaagagcgc cgcgatcgat taccaggctg aggggaagcg acgtagcctt
      481 cgcatcgctg acgtggctgc ggctgagatc gaggccatcg atggggtggc cggcagcgag
      541 gtcactatca gcggcaatcc tctaagcgtc gttccggggg aacccatggt tgtcgcgcga
      601 tccagccgat tagactatcg cgatcatggg atgaactggg aactatcgaa caggaatggt
      661 ttcttctccc ccttcaccta ccagggaccg taggaagaac cggtgatgca agtcgcatcc
      721 tcattggaag cagtgctccg gcgagaccgg gtcattgtgc tggccggcct catcggagta
      781 acggtcctgg cttgggccta catgttctac ctagcctggg atatgcagcg cagcatgagt
      841 gtggactcca tggagatggg gatgagtatg gcttcggccc agctgcggcc ctggggcgcg
      901 gtagactttg ctctcatgtt tatcatgtgg gcggtgatga tgacagccat gatggtaccc
      961 accgccgctc ccatgattct taccttcgct accatcaacc gaaggcgtcg ggagcaggaa
     1021 caacctttcg ttcccactgg ggtgttcatc tcgggatacc tgatcgtttg gtctgggttt
     1081 gccg
//
LOCUS       DASQSL010000512         1004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_58620, whole genome shotgun sequence.
ACCESSION   DASQSL010000512 DASQSL010000000
VERSION     DASQSL010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58620"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            112..>1004
                     /gene="tssC"
                     /locus_tag="VE844_05160"
     CDS             112..>1004
                     /gene="tssC"
                     /locus_tag="VE844_05160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006412398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0033104 - type VI protein secretion
                     system complex [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system contractile sheath
                     large subunit"
                     /protein_id="HZC00757.1"
                     /translation="MNEQTEQAQETQTPAAVAASEAAPVSLLDSIVDETRVARSDSER
                     ARAKDLIGELVTEVLEGTVTVSKDVITTIEARIAEIDRLLSDQLNAVMHAQEFQQLEA
                     SWRGLNYLIMQSETSTSLKVRVMNVGKKDLIKDFKSASEFDQSAIFKKVYEEEYGSFG
                     GAPYAALIGDYEFSRHPEDMYLLDEMSHVAAAAHAPFIAAASPELFDWDSFTELAGPR
                     DLAKIFDTVEYAKWKSFRNSEDSRYVGLTMPHTLGRLPYGAANIPVEAFNFEEDVSGR
                     EHDKYLWTNAAYVLGTKLTDA"
BASE COUNT          238 a          288 c          296 g          182 t
ORIGIN      
        1 gcgcctgcag gagatcatgc agaacacgga aaagctacag gccctcggca aagagctcgg
       61 gcaccaggca ccggctgagt cggaagctca atcctgagcg gggagaacac catgaacgag
      121 caaacagaac aagcccaaga aacccagacc ccagcggcag tagcagcatc agaggccgca
      181 ccggtcagcc tattggacag tatagtggat gagacgcggg tcgcgcgttc ggacagtgag
      241 cgcgcgcggg ccaaggatct catcggagaa ctcgttaccg aggtgctcga aggcacagtc
      301 accgtctcca aggatgtgat cacaacgatt gaggcgcgta tcgccgagat cgaccggctc
      361 ttatccgacc agttaaacgc ggtgatgcat gcccaggagt ttcagcaatt ggaagcctcc
      421 tggcgcggtc tgaattacct catcatgcaa tcggagacca gcaccagtct gaaggtccgg
      481 gttatgaatg ttggcaagaa ggacctcatc aaggacttca agagcgcgtc cgagtttgac
      541 cagtcggcga tcttcaagaa ggtctacgag gaagaatacg gcagcttcgg tggtgctccc
      601 tacgcagcgc tgatcggcga ttacgaattc agtcgacacc ccgaggacat gtatctgctc
      661 gacgagatgt cccatgtcgc cgcggccgcc catgcgcctt ttatagcggc ggcctcgccg
      721 gaactatttg actgggacag cttcaccgag ctcgccggcc cccgcgatct ggcgaagatc
      781 ttcgatacgg tcgaatacgc caagtggaag tcgttccgca actccgagga ttcgcgctat
      841 gtcggcctga ccatgccgca caccttgggg cggctccctt acggagcggc gaatatcccg
      901 gtcgaggcct tcaactttga agaagatgtc agtggccggg agcatgacaa atacctctgg
      961 accaatgcgg cttatgtgct cggtaccaag ttgaccgatg cctt
//
LOCUS       DASQSL010000513         1288 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_99355, whole genome shotgun sequence.
ACCESSION   DASQSL010000513 DASQSL010000000
VERSION     DASQSL010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1288)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1288)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1288
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99355"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..738
                     /locus_tag="VE844_05165"
     CDS             <1..738
                     /locus_tag="VE844_05165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013032416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 family protein"
                     /protein_id="HZC00758.1"
                     /translation="LIAQDLVTIPGTEEARVAESPPYRRWNRAYIDTPGPYEQGLPSI
                     YYIAPPDPLRSQAEREAYIPGKAQLLFISVHEVWPGHFLQYLHSNRSASKFGQLFVSY
                     VFAEGWAHYAEELMWEAGLGHGDPQTHIGQLLTALMRNVRLLCALGLHTQGMTVAACE
                     RMFRELAYQDAANARQQAARGTFDPAYLNYTLGKLMIRKLREDWTTPRGGRQAWRIFH
                     DKFLAYGGPPIPLVRKAMLGAQAGPPL"
     gene            complement(745..1011)
                     /locus_tag="VE844_05170"
     CDS             complement(745..1011)
                     /locus_tag="VE844_05170"
                     /inference="COORDINATES: protein motif:HMM:NF015239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017111 - ribonucleoside triphosphate
                     phosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-triphosphatase"
                     /protein_id="HZC00759.1"
                     /translation="MALDNAVAVYLVDEIGKMECLSVRFIAAMRALLKSPMTLVATVA
                     LKGSGFIAEVKQRKDSLLWEVTRENRDGFPARILAWLDRRGLPE"
BASE COUNT          254 a          408 c          369 g          257 t
ORIGIN      
        1 cttatcgctc aggatctggt cacgatcccc gggaccgaag aggctcgtgt ggccgagtca
       61 cccccttacc ggcgctggaa ccgggcctat attgataccc ccggccccta tgagcagggg
      121 ttgccgtcta tctattatat cgccccaccc gacccactgc ggtcccaggc ggagcgcgag
      181 gcttatattc ctggcaaggc ccagttgttg ttcatctcgg tgcatgaggt gtggccgggc
      241 cacttcctcc aatatctgca ttcaaatcgc tctgcatcga agttcggaca gctctttgtc
      301 agctacgtct tcgcggaggg ctgggcgcac tacgccgagg agctgatgtg ggaggcgggg
      361 cttggccatg gcgatccaca gacgcatatt ggtcaactgc tcaccgccct catgcgcaac
      421 gtgcggctgc tctgtgcgct cggactgcat actcagggga tgaccgtggc agcgtgtgag
      481 cggatgttcc gggagctggc ctatcaagac gctgccaatg ccaggcagca agcggcgcgc
      541 ggcacctttg acccggccta tctcaactat acgctgggca agttgatgat tcgaaaactg
      601 cgcgaggact ggaccacccc gcgcggcgga cgccaagcct ggcgcatatt ccacgacaag
      661 ttcctggctt atggcggtcc gccgatccca ctggtgcgca aggcgatgct gggggctcaa
      721 gcggggccgc ctctttaaga gaggtcattc aggcaatcct cttcgatcga gccatgcgag
      781 gatccgggcg ggaaatccat cgcggttctc ccgggtcacc tcccacagca gactatcctt
      841 ccgctgcttg acctcagcga taaaaccgct gcctttgagg gcaacggttg caacgagggt
      901 catcgggctt ttgagcagcg cccgcatggc ggcgatgaag cgtactgata aacactccat
      961 ctttcctatc tcgtcgacca gatagaccgc cactgcattg tcaagcgcca aagcggggcc
     1021 accacctcgt caagggcggc tacatcgacg ccgtacctcc cgacgcagtg agccctgggg
     1081 aaatccacat gagcgatcac gcgctcttgg ccgtcgaagg tcaccagacg aaatccacgg
     1141 cgctccccat gttcgcggat ctcctcagtg aggaatcatc acaactcggc taccatccgt
     1201 tatcacgatg tgcttgccct gacgcgcgat ccaaaatccc aatttttcca aggtgcgaac
     1261 ggcatcgagg tgattcacgc cgggcaac
//
LOCUS       DASQSL010000514         1089 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_45184, whole genome shotgun sequence.
ACCESSION   DASQSL010000514 DASQSL010000000
VERSION     DASQSL010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45184"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            128..1015
                     /locus_tag="VE844_05175"
     CDS             128..1015
                     /locus_tag="VE844_05175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020718451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NmrA/HSCARG family protein"
                     /protein_id="HZC00760.1"
                     /translation="MANKQNVERLILVTGATGKQGGAVARSLLDRGFRVRGLTRDPQK
                     PDAQALDEQGAEVVQGDMEERSALERALEGAYGVFSVQNFWETGYDREVQQGNAVADA
                     AKAAGVEHFVYSSVGSAHRQTGIPHFESKWEIEEHVRQIGLPYTILRPTFFMQNWEWT
                     REMILGGTVAQPFDPDKPFQQVAVEDVGAFAAIAFENPDRWIGREVDLAGDEQSMTEI
                     AKTFGRVIGRDVSYYQVPWDQFEEQMGEEATLNFRWINDVGYEADIAALRQEYHELTT
                     FERYLRSHGWEGAKVPAGG"
BASE COUNT          255 a          275 c          347 g          212 t
ORIGIN      
        1 cgaacttact gcaaaacaag ccttgacgtc tgctaagttc gatgttaaac aataacggtg
       61 ttcaacatcg aacttagtca ggtacagtag cgtacgacaa cggtcagaga agggagaagc
      121 aagggacatg gccaacaagc aaaacgtaga acgcttgatc ttggtaaccg gggcgactgg
      181 caagcaggga ggtgcggttg cacgcagcct tctcgaccga ggctttcggg ttcgcggcct
      241 cacccgtgat ccgcaaaagc cggatgcaca ggctctagat gagcagggag ccgaggttgt
      301 gcaaggcgat atggaagagc gctccgcttt agagcgggcg ctcgaaggag cctacggcgt
      361 tttctctgtg cagaacttct gggagaccgg ctacgatcgt gaagttcagc agggcaatgc
      421 ggtcgccgat gcggccaagg cagccggtgt ggagcacttc gtctacagct cggtgggcag
      481 tgctcacagg cagacaggca tccctcactt cgagagcaag tgggagatcg aggagcatgt
      541 gcgccagatc gggcttcctt acacgatcct caggcccacc ttcttcatgc agaactggga
      601 gtggacgcgc gagatgatcc tcggaggcac tgtggctcag ccgtttgatc cggacaagcc
      661 gttccagcag gtggctgtcg aggacgtagg ggccttcgcc gccatagcct tcgagaaccc
      721 ggatcgttgg atcgggcgag aggtggatct tgccggggac gaacagagta tgaccgagat
      781 agccaagacc tttgggcgcg tcataggtag agatgttagc tactaccagg taccctggga
      841 tcagttcgag gagcagatgg gcgaagaggc taccctcaat ttccggtgga tcaacgacgt
      901 aggctatgag gcggacatcg ctgccttgcg gcaagagtac catgagctta ctaccttcga
      961 gcgctacctc cgcagccacg gatgggaggg tgccaaggtt cctgcaggag gttaggctgc
     1021 gtaggacaat tattgttttg gcgtaggtac cctcgcaacc tgcgtcaagt agataattgc
     1081 cgaataaac
//
LOCUS       DASQSL010000515         1375 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_181653, whole genome shotgun sequence.
ACCESSION   DASQSL010000515 DASQSL010000000
VERSION     DASQSL010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1375
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181653"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..766
                     /locus_tag="VE844_05180"
     CDS             <1..766
                     /locus_tag="VE844_05180"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZC00761.1"
                     /translation="TVLAPFGLNLRAEKPPFNDVRVRRAMSMAIDRQKQVDTLFEGHA
                     ILGWGVPYFYWKDELPSASDLGPYWQYRPEEAKKLLAEAGYPTGFETTLFYYEYFPQI
                     TSQIQLVQQDLKKNLNIEMKITKNDYTTYFGRYAEGKWDGTAWGFQTGYAVSRDERTY
                     HYMHSKSPKNYFRVNDPIIDDLATKLRQTPDRAEQRALTRKIVEREHDQVLRMWMPFD
                     AGFSIWQPYTRNIGGLDMRGNFGYGSSTLARLWLDK"
     gene            799..>1375
                     /locus_tag="VE844_05185"
     CDS             799..>1375
                     /locus_tag="VE844_05185"
                     /inference="COORDINATES: protein motif:HMM:NF040248.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC00762.1"
                     /translation="MYTYALRRLLLAIPVLLLSSVIVFGLMRVMPGDALTALMAESGN
                     VSERELQKLRKDLGFDLPYHEQYFLWVWQMVTFDPGYSIFTSEPISVALKQAIPVTVE
                     LALLGMGMGLLIAIPVGVLSATRQDKFADYMGRMVAISGLSLPDFWLGTLVITFAAIW
                     FAWIPPLGYTSLWEAPWENLQQFLLPAAVLGF"
BASE COUNT          284 a          396 c          394 g          301 t
ORIGIN      
        1 cacggtcctg gcgccatttg gcctcaacct ccgggcggag aaaccgccct tcaatgacgt
       61 gcgggtccgc cgggccatgt cgatggctat cgaccggcaa aaacaggtcg ataccctctt
      121 tgaagggcat gccattcttg gctggggggt gccgtatttt tactggaagg atgaactgcc
      181 ttccgcttcc gacctgggtc cctattggca gtaccgcccg gaagaagcca aaaaactcct
      241 ggcggaggcc ggctacccca ccgggtttga gacgaccttg ttctactatg agtacttccc
      301 ccagataacc tcccagatcc aactggtgca acaggatctg aagaagaatc tcaacatcga
      361 gatgaagatc acgaaaaacg attatacgac ctattttggt cgttatgccg agggcaaatg
      421 ggacggcaca gcctggggat tccagaccgg gtacgcggtg agccgcgacg agcggacgta
      481 tcactacatg cactcgaagt caccgaagaa ctatttccgc gtcaatgatc ccatcatcga
      541 cgatcttgcg actaagctac ggcaaacccc ggaccgtgcc gagcaacggg ctctgaccag
      601 gaaaatcgtc gagcgggaac acgaccaggt gctacgcatg tggatgccct ttgacgctgg
      661 cttctccatc tggcagccgt acacacggaa cattgggggc ctggacatgc gcgggaactt
      721 tggctatggc agttcgacgc tggcccgcct ctggttggat aaataacaga gaaaggacgc
      781 ggctctcgcg gaacaattat gtatacgtat gcgctccgtc gtctgctcct ggcgattccc
      841 gtgctcctgc tgtcctcagt gattgtcttt ggtttgatgc gcgtcatgcc tggagatgcc
      901 ctgacggcgc tgatggcgga gtcggggaac gtcagtgaac gggagttaca aaaactccgc
      961 aaggatctcg gattcgatct accctatcac gaacagtatt tcctgtgggt ctggcaaatg
     1021 gtcaccttcg acccgggcta ttcgatcttc accagcgagc ccatctccgt cgccctgaag
     1081 caagccatcc cggtcactgt tgaactggcc ttgctgggca tgggtatggg actgctcatc
     1141 gccatcccgg tcggagtcct gtcggcgaca cgccaggaca aattcgccga ttatatgggc
     1201 cgtatggtgg ctatctccgg gttgtcgctg cccgatttct ggctggggac cctggtcatc
     1261 accttcgccg cgatctggtt cgcctggatt ccaccgctgg gctacacgag tctgtgggag
     1321 gcaccgtggg agaatctgca acaattcctg ttgccggcag cggtgctggg ctttc
//
LOCUS       DASQSL010000516         1002 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_155184, whole genome shotgun sequence.
ACCESSION   DASQSL010000516 DASQSL010000000
VERSION     DASQSL010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155184"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..821)
                     /locus_tag="VE844_05190"
     CDS             complement(<1..821)
                     /locus_tag="VE844_05190"
                     /inference="COORDINATES: protein motif:HMM:NF014851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta galactosidase jelly roll domain-containing
                     protein"
                     /protein_id="HZC00763.1"
                     /translation="MCSRSFWRFLSQAACLSCRILALSVTLLLSVNGWGTSSKPVLIQ
                     RATSSSTSTFTAASGPLAAIPSSSLSLSGAWRFAIDPDTSGHARGWAEPEFDDSTWMA
                     VTVPHTWNVMPDHYSYDGIAWYRRSFMPPATARHGHLRLRFEAVFYVARVWLNGIYLG
                     EHEGGYTPFEFDVSGLAKPDRENLLAVQVDNRRAMNRLPADVEPDWSFDWWNYGGIVR
                     DVSLHISSRAFVAHQQITAVPRLVAADEADTATITAWVTVTNTSTEPLKGVLTGEA"
BASE COUNT          243 a          268 c          307 g          184 t
ORIGIN      
        1 gcctcgcccg tgagcacgcc tttcaatggc tctgtcgaag tattggtaac agtcacccag
       61 gcagtgattg tcgccgtatc agcttcgtcc gccgcgacaa gacggggcac agcggtaatc
      121 tgctgatggg caacgaacgc acggctggag atgtggaggg agacgtcgcg gacgataccg
      181 ccgtaattcc accaatcgaa cgaccaatcc ggctcgacgt cggctgggag gcggttcatg
      241 gcgcggcggt tatcaacctg aacggcgaga agattttctc tgtctggctt ggccaggcca
      301 ctcacatcaa attcaaatgg ggtgtacccc ccctcatgtt cgccgaggta gatgccattc
      361 aaccatacac gggcgacata gaagaccgct tcaaagcgca ggcgcagatg cccatgacgt
      421 gccgtggcgg ggggcatgaa gctccggcgg taccaggcta tgccgtcgta actgtaatga
      481 tctggcataa cattccacgt gtgtggcacg gttaccgcca tccacgtgga atcgtcaaat
      541 tcaggctcag cccatcccct cgcgtgtcca gaagtgtcgg ggtcgatagc aaagcgccat
      601 gcaccagaga gggagagtga ggacgatgga atggccgcga ggggaccaga ggcggcagtg
      661 aatgtcgacg tggaggaaga ggttgcccgt tgtatcaata ccggtttcga gctagtaccc
      721 cagccattta cgcttaaaag tagtgtgact gagagcgcca gaatgcggca gctgaggcaa
      781 gcggcttgcg ataagaagcg ccagaaactg cgggagcaca tataaccctc cttgacgcag
      841 aaaatgtgat ggccagacca aagccctgat cgtgcttgag ggcctccaga gcaaatcggg
      901 agcggagatt tacacagaac accaggtcag cctattgcag tattcctgat ggcgaccagc
      961 aatgcaaagg ggtagcgagg agctcacagc ctatgcgacg gt
//
LOCUS       DASQSL010000517         1012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_72744, whole genome shotgun sequence.
ACCESSION   DASQSL010000517 DASQSL010000000
VERSION     DASQSL010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72744"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(227..658)
                     /locus_tag="VE844_05195"
     CDS             complement(227..658)
                     /locus_tag="VE844_05195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011565883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp23/Gls24 family envelope stress response
                     protein"
                     /protein_id="HZC00764.1"
                     /translation="MSEQSTHDGQQQQESPLKTERGSTTIQDGVVSKVAGIAAQEVDG
                     IRMGGGATQAVGSIMSAVPGVSSGSQSQGVSVEVGEVEAAVDLSMTVEYGRVIHQIAE
                     AVRNNVIRRVENLVGLRVTEVNIAVNDIFFPQQEQQQQQQR"
BASE COUNT          181 a          349 c          243 g          239 t
ORIGIN      
        1 gtccaccccg ccgatcttct cgcccgcttg gtcgtagacc ccatagccag cgtagcgggc
       61 ctctatcgcg gtgaacctct cgcttctgtg ttcgcgatcc acggtgtata cctcctcgta
      121 taatgcttcg taccaaacaa acaacgatag ccctacgtat tgccccaccc gctctcccta
      181 ccgagaagcc ccgacccagt ggtgaatcga tcagttgatc ccctgtttac ctctgctgct
      241 gctgctgttg ctcttgctgc gggaagaaga tgtcgttgac ggcgatgttc acctcggtga
      301 ctctcagacc aactaggttc tcgactcgcc ttatgacgtt gttgcgcaca gcctcggcta
      361 tctggtggat gaccctaccg tactcgacgg tcatgctcag gtccaccgcc gcctctacct
      421 cgcccacctc caccgagacg ccctgactct ggcttccgct ggagaccccc ggcacggcgc
      481 tcatgatgct ccccactgcc tgcgtggcgc cgccgcccat tcggatgcca tctacctctt
      541 gagccgcgat cccggcgacc ttggagacga cgccgtcctg gatcgttgtg ctgccccgct
      601 cggtcttcag cgggctttct tgctgctgtt gcccatcgtg agtactttgt tcgctcatac
      661 tcttctctcc tcccactcag agatcaccgc tacaagttta gcgcccacgg aagacgatca
      721 ccatgatgga gactatcgct accaaaagcg ccaccaccac gatcataagc gcagtgaacc
      781 acaccgagta ccttctgtgc tcaacggata ccggtcttgt gcggactcta gcttagcgag
      841 ccttcgttaa ggccacacgc tacgtagtta aagtttggta aagagctagc ccggcatatg
      901 cgaacttctg ggaattctcc ttccacgcac tccggtgaat aaggcgctac tggtctgcct
      961 gctcccctcc aagcctttgt gccggaagcc ttctgctggc cgtggagcta cc
//
LOCUS       DASQSL010000518         2276 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_72746, whole genome shotgun sequence.
ACCESSION   DASQSL010000518 DASQSL010000000
VERSION     DASQSL010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2276
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72746"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(214..510)
                     /locus_tag="VE844_05200"
     CDS             complement(214..510)
                     /locus_tag="VE844_05200"
                     /inference="COORDINATES: protein motif:HMM:NF015365.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HZC00765.1"
                     /translation="MISRVDEAEVDEMWSFVGKKQEQRWLWHAIDHRTGEVLAYVFGR
                     RQDEVFLRLKALLEPFRITRFHTDYWGAYGRHLDPEAYHPGKRNTQNIERKHLT"
     gene            complement(476..841)
                     /locus_tag="VE844_05205"
     CDS             complement(476..841)
                     /locus_tag="VE844_05205"
                     /inference="COORDINATES: protein motif:HMM:NF024169.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1-like element transposase"
                     /protein_id="HZC00766.1"
                     /translation="MVLIPVSCPYCQSDQVTKRGKTDTGKQRYRCQNPECSHQSFLRD
                     PAYRGRLPAIKQQVIEMSLNGRGIRDTARVLKISTATVIQELKKRGDPRIRQHVPPAP
                     TEPRRRGHHDQSGRRGGSG"
     gene            complement(943..1350)
                     /gene="ssb"
                     /locus_tag="VE844_05210"
     CDS             complement(943..1350)
                     /gene="ssb"
                     /locus_tag="VE844_05210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013681691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HZC00767.1"
                     /translation="MASLNSVCLLGHLTRTPEVRYSANGTPVAALGLAVNNRIKRSDD
                     SWQDEPCFVDVVVFGHQAEACATYLHKGDPVLLEGRLRYRIWEDQQGNKRSKHEVIAF
                     RVQFLPKPGPRSDAEDRLSGAPIGAEGDDDVPF"
     gene            complement(1366..1509)
                     /locus_tag="VE844_05215"
     CDS             complement(1366..1509)
                     /locus_tag="VE844_05215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00768.1"
                     /translation="MTRFEAGHTCTLHALPEQFRIRYRTIGSGRGQPVAQLPTPSGAE
                     VMW"
     gene            complement(1780..>2276)
                     /gene="msrA"
                     /locus_tag="VE844_05220"
     CDS             complement(1780..>2276)
                     /gene="msrA"
                     /locus_tag="VE844_05220"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003549301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HZC00769.1"
                     /translation="GGCFWGVQDLICRYDGVLSTRVGYTGGNVPNATYRNHGSHAEAV
                     EVIFDPARISYRQILEFFFQIHDPSTRNRQGNDVGTSYRSAIFYTSDEQKRIAEDTIA
                     DVDASGLWPGKVVTEVVPAGDFWEAEPEHQDYLQRYPDGYTCHFVRPHWRLPIRTDKV
                     AKQA"
BASE COUNT          453 a          658 c          672 g          493 t
ORIGIN      
        1 ggtcatcggc atctgggggt ctgcgagcac ggcagaccag cccgcctttt tgtcctgaaa
       61 ccaatgtcgg tgatgtttta gatctggata tcatgtttca aacaggcagg ccgaattcat
      121 agcgattgac aaacagccca atgatgatgt cgtgcatctc gatagattcg aaaagcagat
      181 cgtcttgcgc accagacgct tgatacgtgt gcgtcacgtc agatgcttcc gctcgatgtt
      241 ctgcgtgttg cgcttgcccg gatggtacgc ttcgggatcg aggtgacgcc cgtaggctcc
      301 ccaatagtcc gtatgaaagc gtgtgatccg aaaaggctcc agtagagcct tcaaccgcag
      361 aaacacctca tcttgacgcc ggccaaagac atacgccaag acctccccgg ttcggtgatc
      421 gatggcatgc cacaaccacc gctgttcctg cttcttgccc acaaagctcc acatttcatc
      481 cacttccgcc tcgtcgaccc gactgatcat gatgtccacg tcgccggggt tcagtcggcg
      541 caggagggac gtgttgacgg atgcgagggt cgcccctttt ttttaactcc tgaatcaccg
      601 tggccgtgct aatcttcaac acgcgtgccg tatcgcggat gccacggcca ttgagactca
      661 tctcgatcac ttgctgtttg attgcgggta agcgcccccg ataggctgga tcgcggagga
      721 aggactgatg cgagcactcc gggttttggc accgatagcg ctgtttcccg gtatcggttt
      781 tgccgcgttt cgtgacctga tcgctctgac aatagggaca ggaaactgga atcagtacca
      841 tggtagccct ccttcgaaga gggcatcagc atggcatgca gagcagtgaa agtccagatc
      901 taaaacatca cccgcatgat gtaggcttgt cgacaggggc ggtcagaagg ggacatcgtc
      961 gtcgccctcc gcgccgatgg gcgcgcccga taggcgatcc tcggcgtcgg agcgcgggcc
     1021 gggcttgggc aggaactgca cgcgaaacgc gatgacctcg tgcttgctgc gtttattgcc
     1081 ttgctggtcc tcccagatcc gataccgcaa ccggccttcg agcaggaccg ggtcgccctt
     1141 gtgcaggtat gtggcgcagg cctcggcctg gtggccgaag accacgacgt cgacgaagca
     1201 gggctcgtcc tgccagctgt cgtcgctgcg cttgatgcgg ttgttcaccg ccagccccag
     1261 ggcggcgacg ggggtgccat tggcgctgta gcgcacctcg ggggtgcgcg tgagatgccc
     1321 cagtaaacag acggaattca gcgaggccat cagggtgtcc tcctctcacc acatcacctc
     1381 ggcgccggat ggcgtcggga gttgggccac gggctgaccg cgcccactgc cgatggtccg
     1441 ataccggatg cggaactgct cgggcaaggc gtgcagcgtg caggtgtgac ccgcttcaaa
     1501 ccgcgtcaaa atttccgtta cgctggtgga tagttaactc gatcgtatgt gcctacgtcg
     1561 gctcgacgcg cctccagggc caaatagctg tgggcgttcc gttccccgtg cgaaaaagac
     1621 aacgtccaca attttacaga gttacgatga tccgataagg tctgcttatc aagccaaata
     1681 cgtaatgaaa actttgacga ggtttgtacc gtgctacgta ccggcgctgt gcattgcatt
     1741 gcacacctcc taacgtgcga tttgctggac gatctgctgt taggcctgct ttgcaacctt
     1801 gtcggtgcga atcggcagtc tccagtgggg ccggacgaaa tggcaggtgt agccgtcggg
     1861 atatcgttgg agataatcct gatgctcggg ctcggcctcc cagaagtcgc ctgccggaac
     1921 gacttccgta acgaccttgc ccggccacag gcctgaagca tcgacgtcgg cgatggtgtc
     1981 ttcggcaatc cgcttctgct cgtcactagt gtagaagatc gcagatcggt agctggtccc
     2041 gacgtcgttg ccctggcgat tgcgcgtgct tgggtcgtga atttggaaga agaactcgag
     2101 aatctgccga tagctgatcc gcgctggatc aaagatgacc tcaaccgctt cggcatgtga
     2161 gccgtgattt cgatatgtag cgttcggcac gttaccgccc gtgtagccga cccgtgttga
     2221 cagaacgccg tcgtaacggc aaataaggtc ctgcacgccc cagaagcaac caccgg
//
LOCUS       DASQSL010000519         1883 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_99438, whole genome shotgun sequence.
ACCESSION   DASQSL010000519 DASQSL010000000
VERSION     DASQSL010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1883
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99438"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(115..187)
                     /locus_tag="VE844_05225"
     tRNA            complement(115..187)
                     /locus_tag="VE844_05225"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(152..154),aa:Lys,seq:ttt)
     gene            402..1853
                     /locus_tag="VE844_05230"
     CDS             402..1853
                     /locus_tag="VE844_05230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008932684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circularly permuted type 2 ATP-grasp protein"
                     /protein_id="HZC00770.1"
                     /translation="MLIDWNSYNIGAGYDELIQSRGLPRTAAEPLCRYLSSLGRSELQ
                     KRKNAADLAILTMGITFTVYTEGGSIDRTWPFDIIPRIISRHEWTRTEMGLKQRVTAL
                     NLFIDDLYHEQRIVKDGVFPAELLANSTNFHKQCMGVNPPYGVWAHICGTDLVRDRDG
                     TLYVLEDNLRIPSGVSYMLENRSVTKRVFPELFENYSIQPVDDYPSQLFDMLASLSPR
                     PAEYPAIGVLTPGIYNSAYFEHAYLAQQMGVELVEGSDLVVGDDDCVYMRTIDGFSRI
                     DVIYRRIDDLFLDPEGFGTQSLIGVPGLLRAWKKGNVGLANAPGAGVADDKVVYAFVP
                     KVIRYYLDQDPIIPNVPTYLCMNDKECSYVLANLDKLVVKPANASGGYGMLIGPHATQ
                     VQRDQFVRLIEHDRRNYIAQPTLSLSTVPTLCEEELEPRHVDLRPFILSGSESYVTLG
                     GLTRVALRKGSLVVNSSQGGGSKDTWVIDTEEE"
BASE COUNT          434 a          503 c          510 g          436 t
ORIGIN      
        1 cgcattcaac cgtgtggctt gtagccatag aggtctttgc tgcgctaagt ttgaccgagg
       61 ttagaccgct taaccttcct cttcctaact atgcctaacc cattgattaa tctgtgggcc
      121 gtgcaggagt cgaacctgcg accaacggat taaaagtccg ctgctctacc ggctgagcta
      181 acggcccata tgtttggctg cgatgatacc gaatacatcg acaagaaaaa agcggaaaat
      241 gaaatctatc gcgctaagat gctccctcca aacccggcta aaataatttt gcaaatcgat
      301 aggggtggtc ttattcttgc catatctcta aaaattgagg ctgaacgtct aagctgatac
      361 tatctgttgg gcggtgtaag tgctaaagca agaaaaaccc tatgttgatt gactggaaca
      421 gctataacat cggcgctggc tatgatgaat tgattcagtc gcgaggcttg ccccgcaccg
      481 cagcggaacc gctgtgccgc tatctgagtt cactcggtcg cagtgaactt cagaaacgca
      541 agaacgccgc agatcttgcc atcctgacca tgggcattac cttcacggtt tacacggagg
      601 gaggaagtat cgaccgtacc tggcccttcg atatcatccc gcgcattatc tcaagacacg
      661 aatggacacg cactgaaatg gggctcaaac agcgcgtgac ggcgctcaac ctgttcatcg
      721 acgatctgta ccatgagcag cgtatcgtca aagacggggt atttccagca gagttgctgg
      781 ccaattctac aaacttccac aaacagtgca tgggcgtcaa cccgccttat ggggtatggg
      841 cccatatctg cggcaccgat ctggtgcgcg acagggatgg caccttatat gtactggagg
      901 ataatctacg catcccctcg ggggtgtcgt atatgctgga aaatcgttcg gtgaccaaac
      961 gcgtgtttcc agagctgttt gaaaactata gcatccagcc ggtcgacgat tatccatcgc
     1021 aactattcga catgctagcc tcgctttcac cgcgcccggc agagtatccg gcgattggag
     1081 tgctgacccc ggggatttac aactcggcct atttcgagca tgcctatctg gcccaacaga
     1141 tgggggtgga actggtggaa ggtagcgatc tggtggtcgg cgacgatgat tgcgtctaca
     1201 tgcgcactat cgatggattt tcccggatcg atgtcatcta ccggcggatc gacgatctct
     1261 ttctcgaccc cgaaggtttc ggcacacagt ccctgatcgg tgtaccgggc ttattgcgcg
     1321 cctggaagaa aggtaatgta ggcctggcca atgcgccggg ggccggagta gccgatgaca
     1381 aggtggtgta tgcctttgtg cccaaggtta tccgctatta cctggatcag gatccgatca
     1441 ttccgaatgt gcccacttac ctctgcatga acgacaagga gtgcagttat gtgctcgcca
     1501 atctggataa gctcgtggtc aaaccggcca acgcctccgg tggctatggt atgctcatag
     1561 ggcctcatgc tactcaggtg cagcgagacc aatttgtgcg gcttatcgag catgatcggc
     1621 gcaactacat cgcccagcct acgctctcac tgtctaccgt gcccactctg tgcgaggagg
     1681 aactcgagcc gcgccatgtc gatctgcgcc cctttatcct gtcagggagc gagagctatg
     1741 tgaccctagg cggattgacg cgcgtcgcgt tgcgcaaagg atcgctcgtg gtcaactcct
     1801 cgcaaggggg cggcagcaag gatacgtggg tcatcgacac ggaggaggaa taactatgct
     1861 atcccgtgtg gccgagcagc ttt
//
LOCUS       DASQSL010000520         1169 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_155214, whole genome shotgun sequence.
ACCESSION   DASQSL010000520 DASQSL010000000
VERSION     DASQSL010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1169
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155214"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1054
                     /locus_tag="VE844_05235"
     CDS             <1..1054
                     /locus_tag="VE844_05235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005963011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HZC00771.1"
                     /translation="IRAEESPKPVLMERFKLTERQAEAILELKLRHLAKLEQITIRSE
                     QEQLSQERARLEQTLASKEHLQRLIRSELEDDAKRYGGTRRSPIVERAEAQAIDETTL
                     IPNEPVTVVLSEKGWVRAAKGHDIKAAELSYRAGDGFKAVAYGRSSQPAVFIDSTGRC
                     YSLPAHALPSARSLGEPLSGRLTPPDGACFEGILLGPPEALFLLASDAGYGFVAQLQD
                     LYAKNKVGKAVLSLPPGAKVLPPAHVFAFASDRLAVATTAGRLLVFPLAELPQLPKGK
                     GLKLIHIPPSRIALRQEYVAAVTVLPQGSALTVVSGQRHMTLKPADLEYYLGERGRRG
                     NSLPRGFQNVSQLKPA"
BASE COUNT          249 a          346 c          330 g          244 t
ORIGIN      
        1 catccgcgcc gaagaatcgc ccaagccagt gcttatggag cggtttaagc ttaccgagcg
       61 acaagccgag gccatcctcg agctcaagtt aaggcatctg gccaagctcg aacagatcac
      121 gatccgtagc gaacaggagc agttaagtca agaacgcgcg cggctggaac aaaccctagc
      181 ctccaaggaa cacctgcagc gcctgatccg cagtgagctc gaagacgatg ctaaacgcta
      241 tggcggcacc aggcgctcac ccattgtcga acgcgccgag gcccaagcga ttgacgaaac
      301 caccctgatc ccgaatgagc ctgtgacagt agtgctctct gaaaagggct gggtgcgtgc
      361 ggccaagggc cacgacatca aggctgccga attaagctac cgggcgggtg atgggtttaa
      421 ggcagtagcc tacgggcgca gcagtcaacc ggctgtattt atcgattcca ccgggcgctg
      481 ttattccttg ccggcgcatg ccttgccttc cgcccggagc ctgggagagc ccctgtcagg
      541 gcgcttgacg ccacccgatg gcgcatgttt cgaggggatc ctgttgggtc cgcccgaagc
      601 cttgttttta cttgcttccg atgcaggcta tgggtttgtg gcgcagcttc aagacttgta
      661 tgcgaaaaat aaggtgggca aggcggtctt gagcttgcca cccggggcca aggtattgcc
      721 cccggcgcac gttttcgcgt ttgccagcga tcggctcgcg gtggccacca cagcggggcg
      781 tttattggta ttccccctag cggagctgcc gcaactcccg aagggtaaag gactcaagct
      841 tatccatatc cccccttcca gaattgccct tcgtcaggaa tatgtggcgg ccgttactgt
      901 gctcccccaa gggagtgctc tcacggtggt ttccgggcaa cgacacatga cgctcaagcc
      961 cgccgatctc gaatactatc ttggcgagcg cggccggcgg ggtaattccc tcccacgggg
     1021 ttttcagaat gtctctcagt taaaaccagc ctaactaact ctcaactata tagtgtcgcc
     1081 ggcagacgtc tctgcgccgc cttaagcgac cattatcgcg catgggtact atggcataaa
     1141 tcctgccgat aaatctatta tagagtctt
//
LOCUS       DASQSL010000521         1949 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_155215, whole genome shotgun sequence.
ACCESSION   DASQSL010000521 DASQSL010000000
VERSION     DASQSL010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1949)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1949)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1949
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155215"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..158
                     /locus_tag="VE844_05240"
     CDS             <1..158
                     /locus_tag="VE844_05240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015143165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00772.1"
                     /translation="IVETVNDQLKNISQTEHSRHRSPFNFFVNLIAGLVAYTFREKKP
                     SLNIRLP"
     gene            complement(202..>1949)
                     /locus_tag="VE844_05245"
     CDS             complement(202..>1949)
                     /locus_tag="VE844_05245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017740246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HZC00773.1"
                     /translation="SPLHLCPPNSAMHIHTIQGAGHLSPFKGQAVSALEGVVTATRSK
                     GFYMQDPLPDADPATSEGIFVFTSSTPSVNVGDRVRVSGTVEEFRLGGEGGVNNLTIT
                     EISSPTVQVITSGNALPAPVMIGAGGRVPPNKVIEDDAVGSVETSGSFDVDTDGIDFY
                     ESLEGMRVQINNAVVVGPTSNFGEIPVVGDLGARATTRTMRGGIVIAADDFNPERVLL
                     DDALTSLPEVNVGDKFTRVEGVLDYSFGNFKLLPTAPVTTLTAGLTPETTVATATDQL
                     SVASFNVENLDPQDAPDKFRRLAEQIVHNLKSPDILGLMEVQDNNGAVNDSVVDANVT
                     FNRLISAIQATGGPGYQFRSINPVDDQDGGEPGGNIRVGFLFNPARVTFVDRPGGSST
                     STTTVVGGAQGPALSANPGCLDPLNPAFTRSRKPLVSEFLFDDHTLFIIANHFNSKGG
                     DQPLFGHHQPPARPSETQRRQQAQVVSDFVQAILARDSNANVVVLGDLNDFEFSDTLG
                     ILKSAGLTDIVETLPPEERYTYVFEGNSQVLDHILVSPNLAQNAVVEYDVVHVNAEFA
                     EQVSDHDPEVARIRF"
BASE COUNT          403 a          570 c          552 g          424 t
ORIGIN      
        1 cgatcgtcga gaccgtcaat gaccaactca aaaacatctc ccaaaccgag cattcccgcc
       61 atcgcagccc gttcaacttc tttgtcaatc tgattgccgg gctggtggct tatacgttcc
      121 gcgagaagaa accctccctt aatatcaggc tcccttaagc tctcccatcc gtggcactgt
      181 gattcttacg tcgaactcac gttagaaacg tatgcgcgcc acttcaggat cgtggtcgct
      241 cacctgctcg gcaaattctg cattcacgtg taccacatcg tattccacca ccgcattctg
      301 cgcgaggttc ggactgacca gtatgtgatc gagcacttgc gaattgccct cgaacacata
      361 ggtgtagcgc tcctcgggag gcagggtctc cactatatcg gtgaggcccg cgctttttag
      421 gatgccgaga gtatccgaaa attcaaagtc attgaggtcc cctaacacca ctacgttcgc
      481 atttgaatcc cgcgccaaga tagcttgtac gaaatcgctc accacctggg cttgttgccg
      541 gcgctgcgtc tccgatgggc gtgcaggcgg ctggtgatgg ccgaagagtg gctggtcacc
      601 tcccttcgaa ttgaagtgat tagcgatgat aaagagcgtg tgatcatcga acaggaattc
      661 actcacgagc ggtttacgac tgcgagtaaa agcgggattg aggggatcga ggcatccggg
      721 attggcactg agtgccggac cctgtgcgcc gccaaccacc gtggtggtgc tcgtggacga
      781 gccacccggg cggtccacga acgtcacccg tgccgggttg aacaggaagc ccacccggat
      841 attgcccccg ggttcaccgc cgtcctggtc atcgaccgga ttgatggagc ggaactgata
      901 cccaggccca cccgtcgcct ggatggcgga aatcagccgg ttgaaggtga cgtttgcatc
      961 caccacgcta tcgttgaccg caccattgtt atcctgcacc tccatcagtc cgaggatgtc
     1021 aggtgatttg aggttgtgta cgatctgctc cgccagccga cggaatttat ctggcgcatc
     1081 ctgagggtcc aggttttcca cgttgaacga agcgactgag agttgatctg ttgcagtggc
     1141 gaccgtggtc tcgggtgtca ggccagccgt gagtgtggtc acaggcgccg tgggtaacag
     1201 cttgaagttg ccaaagctgt aatcaaggac accctcaacg cgggtgaact tgtcgcctac
     1261 attcacttct ggcagagagg tgagcgcatc gtctaggagc acgcgctcgg gattgaagtc
     1321 gtccgcggcg atcacgatac ccccgcgcat ggtacgggtc gttgcacggg cgcccaagtc
     1381 accgacgacc ggtatctccc cgaagttgct ggtagggccc acgaccactg cgttgttgat
     1441 ctggacacgc atgccttcca ggctttcgta gaagtcgata ccatcggtgt ccacatcgaa
     1501 gctgccgctt gtctcgacac tgcccactgc atcatcttca atcaccttgt ttggcggcac
     1561 acgtccgcca gcgccgatca tcaccggtgc gggcaaggca ttgcccgagg tgatcacttg
     1621 taccgtagga ctcgagatct cagtgatcgt gaggttattc actcctccct cgcctcccag
     1681 tcgaaactct tctacggtgc cactgacccg tacgcgatcg cccacgttca ccgagggggt
     1741 ggaggaggtg aacacaaaga tcccttctga ggtcgccgga tcagcatccg gcagcggatc
     1801 ttgcatgtaa aagcccttgg aacgcgtggc ggtgacgaca ccctccagag cgcttacggc
     1861 ctggccttta aaaggtgaga gatgccctgc gccctggata gtgtggatgt gcatcgccga
     1921 atttggggga cagaggtgca atggcgaag
//
LOCUS       DASQSL010000522         1626 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_99446, whole genome shotgun sequence.
ACCESSION   DASQSL010000522 DASQSL010000000
VERSION     DASQSL010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1626
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99446"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..399
                     /locus_tag="VE844_05250"
     CDS             <1..399
                     /locus_tag="VE844_05250"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00774.1"
                     /translation="FSGAFYYREAVGYTLSATALKQLKVEGVSVEMVRALSALKGQRF
                     ETEGAFLQAVEQQLGAEALGQYRALLLKLGEGAGKFNAATYEAFLRQLLERVTVPIIL
                     IEDGASYHRSQAVEQFRQAHAERLTVHRLT"
     gene            656..787
                     /locus_tag="VE844_05255"
     CDS             656..787
                     /locus_tag="VE844_05255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00775.1"
                     /translation="MDTVAIFCTIDDFCQWFEPMFTLALTGRLRGELDKYGIASGDP"
     gene            850..1317
                     /locus_tag="VE844_05260"
     CDS             850..1317
                     /locus_tag="VE844_05260"
                     /inference="COORDINATES: protein motif:HMM:NF045340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretin N-terminal domain-containing protein"
                     /protein_id="HZC00776.1"
                     /translation="MGYTGLGWPGRARSRSRSRTQNSKTIIQKASELTGLAFLYDPEQ
                     VRGKISLHLPQEVSPEETLELLRSALSLHGYTLLRRENTIWIVPAAQAGHLEVVPLGY
                     AEAGELAYTLSQLAPEGVRVVPYYPTNSLILYGNPQAVKALIQTIKGKGEASQ"
BASE COUNT          355 a          437 c          487 g          347 t
ORIGIN      
        1 ttcagtgggg cgttttatta tcgcgaagcg gtgggctata cgctgagcgc aacggcgttg
       61 aagcagctca aggtcgaggg cgtgtctgtg gaaatggtgc gagcgttgag tgcgttgaag
      121 gggcagcgct tcgagacgga aggtgctttt ctgcaggcgg tagagcagca actgggagcg
      181 gaggccctcg gccagtatcg cgccctgtta ctgaagctcg gcgaaggggc gggcaagttc
      241 aacgcagcca cctatgaggc gttcttgcgc cagttgctgg agagagtcac cgtaccgatt
      301 atcctgattg aggacggtgc gtcatatcat cgcagccaag cggtcgagca gtttcgtcag
      361 gcgcacgccg agcgcttgac ggtccatcgc ttgacctaaa ttctcaccgc agttcaatcc
      421 gattgagaag ctgtggaaaa ataccaaaaa ggaggccacc catctgaagt atttcaaggc
      481 gtttgacgaa ctcagagcct cggtgctgac agcatttcgc aaatatcttg aggatgccac
      541 gcgggtcatt cgcgtgatga aaaaattacg ggctcaggcc agccttgcgt gaacggcttg
      601 ccaacagtga ccatgtaatt atttttctga aaagctatag agaagtcagg ttccgatgga
      661 tactgtagcg attttttgta cgattgacga cttttgtcag tggtttgagc ctatgtttac
      721 cctcgcgctg accggccggc tccgtggcga gctcgacaaa tacggtattg ccagcggtga
      781 tccttaggat ccttgtggtc cgtcacgaac cggccctcat gcgtttcttc ggtgtgttgc
      841 tattcctgct tgggatacac gggcctgggg tggcctgggc gggcgaggtc ccgttctcgt
      901 tcgagaacac agaactcaaa gacgatcatc cagaaggcca gcgagctaac gggccttgcg
      961 tttctctacg atccagagca ggtcagaggg aagatcagtc tccacctacc tcaagaggtc
     1021 tctcctgagg agacgctgga gctcttgcgc tccgctctgt ctctgcatgg ctatactctg
     1081 cttcgaaggg agaacactat ctggattgtg cccgcggccc aggccggtca tctggaagtg
     1141 gtgcctttgg gctacgccga ggcgggagag ttggcgtata cactgtccca gctcgcgcct
     1201 gaaggcgtca gagttgtccc gtattatccc accaacagcc tcatcctcta tggcaatccc
     1261 caggcggtga aggcgctgat ccagaccatc aaggggaaag gggaagcaag ccagtaggtc
     1321 ttacataatg ccccccagca gagctggagg ggacggctac cgcatagtcg accgacgacg
     1381 gctctatagc aacggcgcca ctgagcagag ccgcagtgga cgctcgtgaa gagccgaccg
     1441 ccgctcgtaa gacacggagt gggaagcaac tccactctca aaatcgaagg agaacaccag
     1501 ctatgcccgt gttcagtcaa tgcctcctgc tatcgcaaga ggcagatccc cctcccgtcc
     1561 cccaggggaa gcctggcggc tatcgccccc atagagggta tggacaaatg gacactctgt
     1621 cgtggt
//
LOCUS       DASQSL010000523         5079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_18238, whole genome shotgun sequence.
ACCESSION   DASQSL010000523 DASQSL010000000
VERSION     DASQSL010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 5079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5079
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18238"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..305
                     /gene="folK"
                     /locus_tag="VE844_05265"
     CDS             <1..305
                     /gene="folK"
                     /locus_tag="VE844_05265"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020159137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HZC00777.1"
                     /translation="LLSLLQAIENQQGRVRGATRWGPRTLDLDILIYGQAQIKAPELT
                     VPHPGIAERPFVLYPLAEIAPDLKIPGCGALQELLDRCPPKGLERLAPEGLIERHD"
     gene            298..1095
                     /gene="panB"
                     /locus_tag="VE844_05270"
     CDS             298..1095
                     /gene="panB"
                     /locus_tag="VE844_05270"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002710524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HZC00778.1"
                     /translation="MTKLSVASLQAMKRAGERIACLTCYDASFARLLDGSGIDVLLVG
                     DSLGMVLQGWETTLKVKLADMIYHCSHVSRGIERALVLGDMPFMSYASPSQALHNAAR
                     LMSEGGAQAVKLEGGAWLAETVRLLSERGVPVCAHLGLLPQSIHKLGGYRVQGRGAEA
                     AAQIQEDARILKEAGAVMLVLECVPRTLAAEITAALEGIPVIGIGAGSGCDGQVLVLY
                     DMLGISGKSPKFSKDFLASHNTIKAAIEDYVRSVKAGEFPAQEHGFD"
     gene            1095..1967
                     /gene="panC"
                     /locus_tag="VE844_05275"
     CDS             1095..1967
                     /gene="panC"
                     /locus_tag="VE844_05275"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015282302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HZC00779.1"
                     /translation="MQTLNQGAALRPIVARWRAHGASIALVPTLGNLHVGHLALVEQA
                     VRMADHTVVTIFVNPTQFVAGEDYEHYPRTLAQDSLLLSENRVDVLFTPTVKEIYPAG
                     LDKPTRVEVPMLDNILCGAFRPGHFTGVATVITKLLNLVQPTVAIFGEKDYQQLLVIK
                     RLVKDLCIPVEIRSVPTVRAPDGLAMSSRNSYLSAEERQRAPLLYQTLKAAAEAILRG
                     DTAFAAIEDRSMETLKAAGFKPDYFAVRRAEDLGLPEETPTDRRILAAAWLGQARLID
                     NIAVPRSALNLKSD"
     gene            2010..2390
                     /gene="panD"
                     /locus_tag="VE844_05280"
     CDS             2010..2390
                     /gene="panD"
                     /locus_tag="VE844_05280"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014704995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004068 - aspartate 1-decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HZC00780.1"
                     /translation="MYLTMLKAKLHRACVTHSELHYEGSCAIDARLLEAAGIREYEQI
                     HIYNVNNGERFSTYAIQAEPSSRIISVNGAAAHKASPGDRIIICAYANLDEKELADYH
                     PTLVYLDETNRIVRTGHAIPMQAA"
     gene            2457..3464
                     /gene="tsaD"
                     /locus_tag="VE844_05285"
     CDS             2457..3464
                     /gene="tsaD"
                     /locus_tag="VE844_05285"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017026798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HZC00781.1"
                     /translation="MRVLGIETSCDETGVAVYDSERGLLAHALYSQAALHAAYGGVVP
                     ELAARDHVRKTVPLIKEVLAQSQTAAKEIDGIAYTAGPGLIGALLVGASIGRSLAWAW
                     GVPAIGVHHMEAHLLAPMLEREHPEFPFIALLVSGGHTQLVEVMAAGRYRILGESLDD
                     AAGEAFDKIAKVLELGYPGGPALERFATQGRPGRFRFPRPMIRRPGLDFSFSGLKTCV
                     VNTLRGSDQDRQTRADIAWAFVDAVVETLFIKCRRALKLTGLKRLVAAGGVSANQKLR
                     RRLADLAVEAGVQVFYPRPEFCTDNGAMIAYAGCRRLAQGCSEPLGFQVRPRWSLKEL
                     E"
     gene            complement(3468..4049)
                     /gene="plsY"
                     /locus_tag="VE844_05290"
     CDS             complement(3468..4049)
                     /gene="plsY"
                     /locus_tag="VE844_05290"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010962179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HZC00782.1"
                     /translation="MSDSSSLAYLFGSISSAIVLCRIAGYPDPRRQGSGNPGASNILR
                     LYGKKAAAITLAGDLLKGLLPLLIGRALQVPEVILASLGVAAFLGHLYPIFFQFEGGK
                     GVATFIGILYGLAWPAGVAFMLVWIVIAATFRYSSLSALVATALSPVLVFITVPSYAY
                     LTATLLMAGFIFWRHQANIRKLLSGTERKIGSK"
     gene            4155..4511
                     /gene="folB"
                     /locus_tag="VE844_05295"
     CDS             4155..4511
                     /gene="folB"
                     /locus_tag="VE844_05295"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008733652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004150 - dihydroneopterin aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006760 - folic acid-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HZC00783.1"
                     /translation="MDIIYLNDLRIETVIGVYAWERQLKQTVVLDLEMGTDIRKAGET
                     DALEDTLNYKEVAKRVISYVETSRFQLVEALAEGIATLLLTEFRVPWLRLRLNKQGAV
                     RGVRDVGVIIERGSRG"
     gene            4514..5020
                     /gene="folK"
                     /locus_tag="VE844_05300"
     CDS             4514..5020
                     /gene="folK"
                     /locus_tag="VE844_05300"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018954165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HZC00784.1"
                     /translation="MARVYIGVGSNVDPEANIRRGIRLLRRAFGDLIVSPVYESPAVG
                     FAGNNFYNLVVGFDTALKPQALIQELHTIELQCGRERNAPRFSPRTLDLDLLLYGAWV
                     LHEEKLELPRRDILEYAFVLRPLADIAADLLHPVSGQRIEDLWQRFERNAQPLQPLNP
                     VSFFLETE"
BASE COUNT         1027 a         1392 c         1592 g         1068 t
ORIGIN      
        1 agctattgag cttgcttcag gccatagaga atcagcaggg gcgggtacgc ggcgcgacgc
       61 ggtggggacc gcgaaccctg gatctggata tacttatcta tgggcaggcg cagatcaagg
      121 cgcctgaatt gacggttcct catccgggga tcgccgagcg cccctttgtc ttatatccac
      181 tggcggagat cgcgccggat ctgaagatcc cgggatgtgg ggcgcttcag gagctgcttg
      241 accgctgccc gcccaaagga ttggagcggc ttgctcccga aggattaatc gagcgccatg
      301 actaagctct cggtcgcgag tttgcaagcg atgaagcggg cgggggaaag gatcgcctgc
      361 ctcacctgct atgatgccag ttttgcgcgt ctgctcgatg gatccggcat cgacgtccta
      421 ttggtcgggg attcgctcgg tatggtgctg caaggctggg agacgacctt aaaggtcaaa
      481 ttggccgata tgatctatca ctgcagtcac gtgagccgcg ggatcgagcg cgcgctggtg
      541 cttggggata tgccctttat gagttatgcc agcccctctc aggcgctcca taatgcggct
      601 cggctcatga gcgaaggcgg ggcgcaggcg gttaagctcg aaggcggggc atggctcgct
      661 gagacggtgc gtctgctctc tgagcgcggt gtcccggtct gcgcgcatct agggttattg
      721 ccccagtcga tccataaatt gggcggttat cgggtgcagg ggcgaggagc cgaggccgcc
      781 gcccagatcc aggaggatgc gcggatcctc aaggaggccg gggcagtgat gctggtgctc
      841 gagtgtgtgc cgcgcacgct cgctgccgag atcacggcag cccttgaggg gatcccggtg
      901 atcgggatcg gggcgggatc gggatgcgat gggcaggtgc tggtgctcta tgacatgctt
      961 gggatcagcg gtaaaagccc caagttctct aaagattttc tcgcctcgca taacactatc
     1021 aaggctgcca tcgaggatta cgtgcgctcg gttaaggcgg gcgagtttcc ggcccaggag
     1081 cacggattcg attagtgcaa acgcttaatc agggagctgc acttcgcccc attgtggcac
     1141 ggtggcgcgc gcacggggca agcatcgcgc tggtgccgac cctaggcaat ctgcatgtcg
     1201 ggcacctggc cctggtggaa caagccgtgc gcatggcgga tcacacggtg gtgacgatct
     1261 tcgtcaatcc cacccaattc gtggcgggtg aggattatga gcactatccc cgcaccttag
     1321 cccaagatag cctgctgctc tcggagaaca gggtggatgt gttgtttacc ccaacggtca
     1381 aggagatcta tcccgccggg cttgataagc ctacccgggt cgaggtcccg atgctcgata
     1441 atattctctg cggcgccttt cggcctgggc attttaccgg tgtggcgacg gtgatcacga
     1501 agcttttgaa cctggtgcag ccgaccgtcg cgatcttcgg tgaaaaggat taccagcaac
     1561 tcctggtgat aaaacgcctg gtcaaagatc tctgcatacc ggtggagatc cggtccgtgc
     1621 ccacagtaag ggctcccgat gggctggcga tgagctctag gaacagctat ttaagcgcag
     1681 aggagaggca gcgtgcaccg ttgctctatc aaaccttgaa agcggcggcg gaggctatcc
     1741 tgcggggcga taccgcgttc gctgcgattg aggatcggag catggagacc ctgaaagctg
     1801 ccggttttaa gccggattat ttcgcggtgc ggcgggcgga ggacttgggc ttacccgaag
     1861 agacgcctac cgatcgtagg atcctcgccg ccgcttggct aggccaggcg cgacttatcg
     1921 acaatattgc agtgccaaga tcggcattga accttaagtc cgattaggcc ataatttcta
     1981 tccaataact actggggcgc taagattcta tgtatctgac gatgttgaaa gccaaattgc
     2041 accgcgcgtg cgtcacccat tccgagctcc attacgaggg ctcgtgcgcg atcgatgcgc
     2101 gtctgctgga agccgccggg atccgcgagt acgagcagat ccatatctat aatgtcaaca
     2161 atggcgagcg ctttagcacc tatgcaatcc aggcggagcc gagttcccgc atcatctccg
     2221 tcaatggtgc cgctgcccac aaggccagcc cgggtgatcg catcattatc tgcgcctatg
     2281 caaacctcga tgagaaagaa ctcgccgatt atcaccccac cctggtctat ctcgacgaga
     2341 ccaaccggat cgttcgcacc ggtcatgcga tccctatgca ggcggcctga acctcacccc
     2401 caccccttcc ctccccttga ccccggggga gggcgaggga gggggtgatc cggtccatgc
     2461 gtgtcctggg gatagaaacc tcgtgcgatg aaaccggggt tgccgtgtac gattcggagc
     2521 gagggctttt ggcacatgcg ctctacagcc aggcggcctt gcatgcggcc tatggcggtg
     2581 tggtccccga gctcgccgcg cgcgatcatg tgcgaaaaac agtaccgctg atcaaggagg
     2641 tattggccca atcccagacc gcggccaaag aaatcgatgg catcgcctat accgcagggc
     2701 cggggctcat tggtgccctg ctggtggggg cgtccatcgg ccgcagcctg gcatgggcct
     2761 ggggcgtgcc ggccattggc gtacatcaca tggaggccca tttactcgcc cccatgctgg
     2821 aacgggaaca tccagagttc ccttttatcg cgcttttggt ctcggggggg catacccaac
     2881 tggtcgaggt catggcggcg gggcggtatc ggatcctcgg cgagtctttg gacgatgcgg
     2941 cgggcgaggc cttcgataag attgccaagg tgcttgagct gggttatccg ggcgggcctg
     3001 cgctcgagcg atttgccacc caggggcgtc ccgggcggtt ccgttttcca cggccgatga
     3061 ttcgaagacc ggggctcgat ttcagtttca gcggcttgaa gacctgtgtg gtcaataccc
     3121 tgcgcggatc tgatcaagac cggcaaaccc gggcggatat tgcctgggcc tttgtcgatg
     3181 ccgtggtcga gaccttgttt atcaagtgtc gcagggcgct caagctcacc ggactcaaac
     3241 gcttggtggc tgcaggcggg gtgagcgcca accaaaagct gcgcaggcgg ctggccgatc
     3301 tggccgtgga agcgggggtg caggtgtttt atccgcgccc ggagttttgt accgacaatg
     3361 gcgcgatgat cgcctatgca ggctgtcggc ggctggccca gggctgctct gagccgttag
     3421 ggtttcaagt gcggccgcgc tggtcgctta aggagttgga atagatatta ttttgagccg
     3481 atcttccgct ctgttccgga aagcagctta cggatattgg cttggtgccg ccagaagatg
     3541 aagccggcca tgagcagggt ggccgtcaaa taggcataag agggtaccgt aatgaagacc
     3601 aggaccgggc tcaatgcagt cgccaccagg gctgatagag atgaatagcg gaaggtggcg
     3661 gcgatcacga tccaaaccag cataaaggcc acgcctgccg gccaggcaag cccatataag
     3721 atgccgatga aggtagccac ccccttgccg ccttcaaact ggaaaaagat cggatagaga
     3781 tgcccgagaa aggcggctac tcccaggctg gcaaggatca cttcagggac ctggagcgcc
     3841 cggccgataa gcaggggtag aaggcctttt aacagatcgc ctgcgagcgt gatcgccgcc
     3901 gctttctttc catagagccg tagaatattg ctggcgcccg gattgcccga gccctgtcgg
     3961 cgcggatcgg ggtagcctgc tatccggcac agtacaatgg ccgaggagat tgagccgaat
     4021 aaataagcga ggctactaga atcagatata gaaacatgcg gctattggat gcgtttatac
     4081 ttgacaggtc aagggttcat cgggtttagt gtttgcttta tgaacaggct tatattaatt
     4141 ctacaacagc ggtcatggat attatttatc tcaacgatct acggatagag acggtgatcg
     4201 gcgtatatgc ctgggagcgt caattaaagc agacggtggt tttggatctc gagatgggca
     4261 ccgatatccg taaagcggga gaaacggatg ccctggaaga tacccttaac tacaaagagg
     4321 tcgccaagcg cgtgatctca tatgtggaaa ccagccgctt ccaattggtg gaggccctcg
     4381 cagaagggat cgccactctc ctgcttaccg aatttcgggt accctggttg cggttacggc
     4441 tcaataaaca gggcgcggtg cgcggtgtgc gggatgtggg ggtcatcatc gagcgcggca
     4501 gtcgcgggta acgatggcac gggtctatat cggtgtaggc agcaatgtcg atcccgaggc
     4561 gaacatccgc cgggggatcc ggttactgcg aagggccttt ggcgatctga tcgtctcgcc
     4621 cgtttatgaa agcccggccg tcggttttgc cggaaataat ttctacaatc tagtggtggg
     4681 cttcgatacc gctctcaagc cccaggcgct gatccaggag ttgcatacta tcgaactcca
     4741 atgcggccgg gaacgcaatg ctccgcgctt ttctccccgt accttggatc ttgacctctt
     4801 gctttacggc gcttgggtcc tccatgagga gaagctcgag ctgccccgcc gggatatcct
     4861 ggaatatgcg tttgtattgc gccccttagc cgatattgcc gctgatctgc tccatcccgt
     4921 gagcgggcaa cgcatcgaag atctctggca gaggtttgaa agaaacgctc aacccctaca
     4981 acccctaaac ccggtgagct ttttccttga aacggagtag ctatcccatg agctgcaggc
     5041 actaccctcc tcaacaaccg ctcctcaggt gggcggccc
//
LOCUS       DASQSL010000524         1290 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_141377, whole genome shotgun sequence.
ACCESSION   DASQSL010000524 DASQSL010000000
VERSION     DASQSL010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141377"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(304..474)
                     /locus_tag="VE844_05305"
     CDS             complement(304..474)
                     /locus_tag="VE844_05305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00785.1"
                     /translation="MEAYCSSCGAEVEAYELIECASCEQYFCEDCIDEGDMCFACTEA
                     DYEDGEDEEEDE"
     gene            complement(621..1052)
                     /locus_tag="VE844_05310"
     CDS             complement(621..1052)
                     /locus_tag="VE844_05310"
                     /inference="COORDINATES: protein motif:HMM:NF024697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4079 family protein"
                     /protein_id="HZC00786.1"
                     /translation="MTEWLPFLHPVWQSVGIALGFMAWRKGLALRRGRRAQVQATPHG
                     AQRSGHVRLGKCCLWLIGSGYLLGLGELCFVRGEPIIRSAHFYFATIALGLFGWGAVY
                     GFALLRSGSTPMERRDLHAFLMPLALLMMVGVGVLGLQLLP"
BASE COUNT          285 a          379 c          370 g          256 t
ORIGIN      
        1 cagcaaaggt agggacggca gcagagacat gaggccattg ccatcacgaa acgcgggcgt
       61 gcgatgtggg ggtatcgccg gtgccggcgc ttgcatttcg ctcctacggc tgaggacaca
      121 gccgctcgcc gatgcctccg gggtccgcga tgataatgta atgctgatga tcgggcgtca
      181 aagaccgcca atgtgggttt atggtttcat gggatgtacg acagtggaat gtaatagcgg
      241 ctggactcac ctcgtccaca aggctgatgt gcaaatattt ccacacccag cgctggggag
      301 tggttactca tcctcctctt cgtcctcgcc gtcttcgtag tcggcttctg tgcaggcgaa
      361 acacatgtcg ccctcgtcaa tacaatcctc acagaaatat tgttcacatg aggcacattc
      421 gatcagttcg taggcttcga cttctgcgcc acaggaactg cagtacgctt ccatctgact
      481 catctcctat gctgcaatac tggctataat tgactttttc ccctactgcg ggaggaattc
      541 ccgtcgattc ggccggttat tacttatacc gcacctgccc ctttgtcaag agtcgggggc
      601 agaattcgct aaccacatgg ttagggaagc aattgtaagc cgaggacccc cactcccacc
      661 atcatcaaga gcgccagagg catgagaaag gcgtggaggt cgcgccgctc catgggcgtc
      721 gaaccgctgc gcagcagggc aaacccgtac accgcccccc aaccgaagag gccaagggct
      781 atggtggcaa agtaaaaatg cgccgagcgt atgatcggct ctccacgcac gaagcagagc
      841 tcgccgaggc cgagaagata gccgctgccg atgagccaca ggcagcattt cccaagccgc
      901 acgtggcctg agcgttgcgc gccgtgcggg gtcgcctgaa cttgggcgcg gcggccccgg
      961 cgtaaggcta ggcccttgcg ccacgccatg aatcccaggg cgatgccgac gctttgccaa
     1021 acggggtgaa gaaagggtaa ccattccgtc atgcgcgctg atgcctccgg ccacgcaccc
     1081 tggggtgcgc tcgaacacgt ctcagcccta ttttgtgcgc acctcatgcc cgcaaacgtg
     1141 tacaataaaa gctcggcgag acaagatgca agtggtatcc ggcaattctc aggtgtagag
     1201 acagcggagg atcttatgcg cgagaatacg ctcaaaacga tctgggctcg tggtgaagcc
     1261 gtcgtcaacg gctggctctc cattccaagc
//
LOCUS       DASQSL010000525         2483 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_112092, whole genome shotgun sequence.
ACCESSION   DASQSL010000525 DASQSL010000000
VERSION     DASQSL010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2483
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112092"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..79)
                     /locus_tag="VE844_05315"
     CDS             complement(<1..79)
                     /locus_tag="VE844_05315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EPSP synthase"
                     /protein_id="HZC00787.1"
                     /translation="MDKLIISGGIPLNGEIPISGAKNAAL"
     gene            complement(132..362)
                     /locus_tag="VE844_05320"
     CDS             complement(132..362)
                     /locus_tag="VE844_05320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011633946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HZC00788.1"
                     /translation="MIEAAIPEARAIVESEDRIHFQATVISPAFSGLSMVKKHQLVYQ
                     ALGDCMQSEIHALSITTLTPEEWDSACKQAGD"
     gene            complement(398..739)
                     /locus_tag="VE844_05325"
     CDS             complement(398..739)
                     /locus_tag="VE844_05325"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HZC00789.1"
                     /translation="MLPATARTPVNPLLRQRRDNLWELSGDLDMGSVPHILDQAKHLF
                     KGKQGTITVVDLAEVRRIDSAGLALLVEWLRQAQRKGVSIHFENIPNQMRAIVTVCGL
                     DEILPASAFKA"
     gene            complement(681..1334)
                     /locus_tag="VE844_05330"
     CDS             complement(681..1334)
                     /locus_tag="VE844_05330"
                     /inference="COORDINATES: protein motif:HMM:NF017319.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZC00790.1"
                     /translation="MKRLYFTFFLLFGWWVVGFAAVPHEAQSLIKATSDKVIARIKTE
                     REALRADPKRLYNLVHELILPHFDFVRISQWVLGKHWRTANPQQRSKFIEEFRTLLVR
                     TYAMALLEYADRPIKFLPVHADPQGETVTIKTEVEGPGNQPVPMNYRLHIKGNEWKVF
                     DVSVDGVSLISTYRASFASEIRQGGLDALISSLETKNTRVTSNSTNTGKSPSKTTPR"
     gene            complement(1436..1522)
                     /locus_tag="VE844_05335"
     tRNA            complement(1436..1522)
                     /locus_tag="VE844_05335"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1486..1488),aa:Leu,seq:caa)
     gene            1840..2483
                     /locus_tag="VE844_05340"
                     /pseudo
     CDS             1840..2483
                     /locus_tag="VE844_05340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012746719.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
BASE COUNT          547 a          666 c          657 g          613 t
ORIGIN      
        1 gcaacgccgc atttttagca cccgagatag gtatctcgcc gttaagcggt atgccacccg
       61 atataatcag cttgtccatc gcatctttag ttgagagcgg gtggaataga tcccaagcag
      121 tcgggtgagt atcaatcccc cgcttgtttg cacgccgagt cccattcttc tggagtaagg
      181 gttgttattg acaaggcgtg gatctccgac tgcatgcagt cgcccagggc ttgatacaca
      241 agttgatgct ttttgaccat agataggcca ctgaaggctg ggctaatgac cgtagcctga
      301 aaatggatcc tatcttcgct ctccacgata gcgcgtgcct caggtatagc tgcttcgatc
      361 aagtgcttta tatcgtcggg tgtcataaaa gatcagatta agctttgaaa gcgctcgccg
      421 gtaggatctc atccaagccg catacggtaa cgattgcccg catctggttg gggatgttct
      481 caaagtgaat tgagacgccc ttgcgctggg cttgacgcaa ccattctacc aatagggcca
      541 agcccgcact gtcgattcgg cgaacctcag cgagatccac caccgttata gtgccctgct
      601 tacctttaaa gagatgcttg gcttgatcga gtatgtgtgg caccgaaccc atgtccaaat
      661 ccccagaaag ctcccagaga ttatctcggc gttgtcttag aaggggattt accggtgttc
      721 gtgctgttgc tggtaacacg cgtatttttg gtctcaagac tgctgattaa ggcatctaat
      781 ccaccttgcc ggatctcgga agcaaatgag gcccgataag tagatattag gctcacccca
      841 tcgacggata catcaaagac cttccactca ttacccttta tgtgcaggcg gtaattcatg
      901 ggcacaggtt ggttaccagg gccttcgacc tcggttttta tcgtcaccgt ttctccttgg
      961 ggatcggcat gtacaggtag aaattttata gggcgatcgg catactccag caacgccatc
     1021 gcataggtgc ggacgagtag cgtgcggaat tcctcgatga attttgatct ctgttgcgga
     1081 tttgctgtcc gccaatgctt tccaagcacc cactgcgaga tacggacaaa atcaaaatgg
     1141 ggaagaatca attcatgcac caaattatac aagcgcttcg gatctgcccg cagcgcctca
     1201 cgctcggtct tgatgcgcgc aatgacctta tcggaggtgg ctttgatcaa ggactgcgcc
     1261 tcatggggca cggcggcgaa accgactacc caccatccga acaacaggaa aaacgtaaaa
     1321 tacaagcgtt tcatagtggt tcaatctgcg cccggcatgg ggtcgggcga tacattggga
     1381 gatttcaaaa caatgctgcg atccagtggg ttgagaaaac attgatttcc caacttggtg
     1441 ccgagagaga gaatcgaact ctcacgaggt tgcccccacc agattttgag tctggcgcgt
     1501 ctaccagttc cgccatctcg gcaggatatc aacaatcacc tgtaagatag taagtataaa
     1561 aaatgcgggc agcaaaagga aattaaattt accttctggg aaaaattccg gttgcctggt
     1621 cataatctgc aagacatact ctctcatcac ctcaggccac actgctctgg taattattac
     1681 aagtgctctt gtaacttttt ccggtcgctt cttccgtctc gcgccaaaag gcgctctgat
     1741 agcgccgttt gttaaaggca taaaagatgc tgagccattg tgctagagcc gcaagcggag
     1801 tgtcacacat taaattaata acgacagtgg agcagtccca tccccacctt aatctatagc
     1861 ctgatccccg cacgcctcga tgccttgccg tggtcgcggt ggcattggcg ggtggtgatc
     1921 gcgctcggcg tcacctggat tctcgatgga ctcgaggtaa ccatcgtcgg atcgcttggc
     1981 ggtatcctgc agcgccctga caccctcgcc ctctcagcta tcgagattgg ctgggcgggt
     2041 tcaagctacg tcgccggcgc ggtgatcggc gcgctcgtct tcgggcgagc ggccgatcgg
     2101 ttcggccgaa aacggctgtt tctcatcacc ctcgcggtgt acctcttcgg cacggtattg
     2161 acggcattcg catttgactt tatgtcattc atcgcctgcc gtttcatcac cggccttggt
     2221 atcggcggcg agtacgcggc gatcaactcc gcgattgacg agttgatccc cgcgcgtgta
     2281 cgcggacaga cggatcttgc gatcaacggc acattttggg ccggcgcggc gctcggcgca
     2341 ggcgtgagtt tgctattgct cgatcccgca gtgctctgac ccgatctcgg ctggcgcatg
     2401 gccttcgcct tgggtgcgat cttgggtgtg gcgatcttac tggtgcgccg gtatgtgccc
     2461 gagagcccac gctggttgct gat
//
LOCUS       DASQSL010000526         1688 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_4600, whole genome shotgun sequence.
ACCESSION   DASQSL010000526 DASQSL010000000
VERSION     DASQSL010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1688
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4600"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..340)
                     /locus_tag="VE844_05345"
     CDS             complement(<1..340)
                     /locus_tag="VE844_05345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00791.1"
                     /translation="MAATKKDPVLVVLQLSGGNDYLNSVIPYNNPLYRDNRPAVGIPD
                     DQILHLDKDYGFHPSMAPLKKIWDEGKLAIMHGVGYANSPRSHFRSMDIWHTCEPDKV
                     GTEGWLGRVAR"
     gene            complement(373..>1688)
                     /locus_tag="VE844_05350"
     CDS             complement(373..>1688)
                     /locus_tag="VE844_05350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1800 domain-containing protein"
                     /protein_id="HZC00792.1"
                     /translation="KGYEATVEELLHPESQEPVDAYTLLRYQPAALLPGGQPPMGNVN
                     YMFYLVNTKRPLEEKMGLFWHHVFATGNSKVDNYDQMLEQINLFRQRGMGNYRELLVE
                     LAKNPTMIFWLDNNENHGYAVNENWGRELLELFSLGVGNYTEKDVREASRAFTGWTFE
                     TKIPRLPYGRFPWKFEYRPEDHDDGEKEFLGHRGRFNGEDIIDIIVQQPACGRFIARH
                     LYNFFVADEPQVPAWSIEPPRDPQAIDTLATTFRESNYDIRSVLRVLFNSDFFKKARF
                     QHMKSPAEVVVGTLRLVGGYEIPRPGYGELSMQPSYMGQDLLNPPSVEGWHTGKEWIN
                     SGSLMARINFVAELVGDPSLPGVRAIINRLKVKGTLTPEQLVDGCLDLLGPVEVGAES
                     RQELTDQAKEWGQLSWDNEVNSQLADKRVGEMLQLIVATREYQFA"
BASE COUNT          340 a          502 c          475 g          371 t
ORIGIN      
        1 cacgcgccac acgacccagc cagccttcgg tccccacttt atcgggctca caggtgtgcc
       61 agatgtccat ggagcggaag tgtgagcgcg gcgagttggc atagcccacg ccgtgcatga
      121 tggccagttt cccctcatcc cagatcttct tcagaggggc catcgacgga tggaagccgt
      181 agtccttatc gaggtgcaga atctggtcat cgggaatgcc cactgccggc cggttatcgc
      241 ggtacagtgg gttgttatat ggaatcaccg agttcaaata atcgttcccg ccggaaagct
      301 gcaggacgac caacacggga tcttttttcg ttgctgccat gtatattcct ccttcatgat
      361 aaggctcagg tgttatgcaa attgatactc tcgggtcgcc acaatgagtt gcagcatctc
      421 accaacgcgc ttgtcggcga gctgggagtt cacctcgttg tcccagctga gctggcccca
      481 ctccttggcc tgatcggtca gctcctgccg tgattcagca ccgacttcca cgggccccag
      541 cagatccaga cagccgtcga ccaattgctc gggtgtcagc gtgcctttga ctttgagccg
      601 attaatgatg gcgcggacgc ccggcagcga cggatcgcca accagctccg ccacgaagtt
      661 gatgcgcgcc atcaaggagc cgctgttgat ccactcttta cccgtatgcc agccttccac
      721 gcttggcgga ttgagcaggt cctgacccat ataggagggc tgcatcgaca gctcaccgta
      781 cccaggtctt gggatctcat agccgcccac taagcgcagc gtacccacca ccacctccgc
      841 cggggacttc atatgctgga aacgggcctt cttgaagaag tccgaattga acagcacgcg
      901 gaggaccgag cgtatgtcat agttcgattc tcggaaggtg gttgccaagg tgtcgatcgc
      961 ctgggggtcg cgtggtggct cgatcgacca ggcgggcacc tgtggctcat cggccacgaa
     1021 gaaattgtac agatgccgtg cgatgaagcg gccacaggcc ggctgctgca cgatgatgtc
     1081 gatgatgtct tcgccgttga agcggccgcg atgaccgagg aattccttct ccccgtcatc
     1141 atggtcttcg gggcgatact cgaacttcca ggggaagcgg ccatagggca ggcgtggaat
     1201 tttggtctca aaagtccagc cggtgaaggc acgtgaagct tcccggacgt ctttctcggt
     1261 atagttgcca acacccagac tgaacagttc gagcaactcc cggccccagt tctcgttgac
     1321 ggcgtagcca tgattctcgt tattgtccag ccagaaaatc atcgtggggt tcttcgcaag
     1381 ctcaactagc agctcgcgat aattacccat gccgcgctgg cggaacaggt taatctgctc
     1441 cagcatctgg tcgtagttat ccaccttcga attgccggtg gcaaacacgt gatgccagaa
     1501 cagccccatc ttttcttcca aggggcgttt ggtgttcacc agataaaaca tgtaattcac
     1561 gttccccatg gggggctgcc cgccgggaag caatgccgcc ggctggtacc gcagcagcgt
     1621 gtaggcatcg accggttcct gggattcagg gtgcaacagc tcttccactg tggcctcgta
     1681 ccccttcg
//
LOCUS       DASQSL010000527         1463 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_4608, whole genome shotgun sequence.
ACCESSION   DASQSL010000527 DASQSL010000000
VERSION     DASQSL010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1463)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1463)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1463
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4608"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..244
                     /locus_tag="VE844_05355"
     CDS             <1..244
                     /locus_tag="VE844_05355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00793.1"
                     /translation="LLLAVVWWYIVAGPILTSDELDPGMARYHFFRSLAIPALFFLSI
                     GISLVSVNAAVASWLLLFVADVMMWRLQRRRVRSST"
     gene            complement(777..1340)
                     /locus_tag="VE844_05360"
     CDS             complement(777..1340)
                     /locus_tag="VE844_05360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00794.1"
                     /translation="MVDRSSLRLSATLVVIGEVLFALVTLFHPGREDPNNHPAVSAEY
                     ASSASWTAVHFGQFVFMAVLLAGLLVLFFALNVGSGALRWVGRFGAVSVVVALALYGV
                     LQAVDGVALKHAVDAWTNAPEAEKATRFASAETVRWLEWGVNSYQNFMFAVSLILLAT
                     MIVGTARIPRAIGYLMGLAAIPNLVQS"
BASE COUNT          335 a          438 c          394 g          296 t
ORIGIN      
        1 gctgttgctg gcggtggtgt ggtggtacat cgtcgctgga ccgatactaa ccagcgatga
       61 gctcgaccct gggatggcca ggtaccactt tttcaggagc ttggcgatac ccgccctctt
      121 cttcctctcg atcggcatct cgttggtcag cgtcaacgcg gcggtggcct cctggttgct
      181 actgttcgtg gcggacgtca tgatgtggcg cttgcagcgg cgacgagtgc gttcctctac
      241 ctagcaccta gagggaacga acttccgaga accacctaca agcgaagtag ttcggagtag
      301 cttcattggg cattgctccg atcctataag tctggccttc acaggaccca taagacttgc
      361 ctgaggtatt atctgtttct tgtgtacgat gcgacgaacc cccctgagtt gtacataaga
      421 aaaccgctca gcataggacc gaggctatgc gacctgccga gaatttttgt tccacgcact
      481 tgggtgaata gagcttcggc aggcagcatg tactctacat aagaaacctt accggatagg
      541 gtcgggcctg tgcacaactt ccgagaaccg caccactcta ggaaactagt ctgtaagctt
      601 cagctaagta gtagtagcgg ccccgctcag gttggccttg ttccaggttg atccggctcc
      661 ttcatccgcc aggcgacgat gagaagccag atgctccacg caagcataag gggtaagccg
      721 acgaacgaga ggctcccggc taacaaggtg accgagaagc cctcggttcc gagcactcaa
      781 ctttgcacga ggttgggaat ggcggccaac cccatcaggt aaccaatcgc cctggggatt
      841 cttgctgtcc ccacgatcat ggtcgcgagc aggatgagcg acacagcgaa catgaagttt
      901 tgatagctgt tcacccccca ctccagccat ctcaccgttt cagcactggc aaagcgtgtt
      961 gccttctccg cctccggtgc gttcgtccac gcatcaaccg cgtgcttaag ggcgacccca
     1021 tccacggcct gaaggacgcc gtaaagcgcg agcgctacca ctaccgaaac ggcaccgaac
     1081 cgacccaccc acctcagtgc tccagatccg acattaagag cgaagaacag aacgagcagt
     1141 ccagcgagga ggacagccat aaagacgaac tgcccgaaat ggacagcggt ccaactagcg
     1201 ctgctggcat actccgcgga cacagcgggg tggttattgg gatcttcccg accggggtga
     1261 aagagggtca cgagagcgaa aagcacttcc ccgatgacca ccagcgtcgc tgacagacga
     1321 agcgagctgc gatcgaccat gatgatcctc ctgtgtgtat cccacctaat cctccaagct
     1381 atcacacaca gcctggctcc ttctcagcag ctccgtgaat atccttagaa gcggcaactg
     1441 agtttccggg aagcccgttc acc
//
LOCUS       DASQSL010000528         2162 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_29766, whole genome shotgun sequence.
ACCESSION   DASQSL010000528 DASQSL010000000
VERSION     DASQSL010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2162
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29766"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            131..1246
                     /gene="prpC"
                     /locus_tag="VE844_05365"
     CDS             131..1246
                     /gene="prpC"
                     /locus_tag="VE844_05365"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013219930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050440 - 2-methylcitrate synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HZC00795.1"
                     /translation="MTFKAAGLDDVVAGQTAIATVGKAGAGLTYRGYAIEDLAGQSTF
                     EEVAYLLLYGVLPNAYQLQSYQEALRRLRDLPPPLKTVLEQLPGDTHPMDVLRTGCSA
                     LGALEPEGPKRDAVAIAHRLFACLSSMLLYWYHFHQGNTRLAIDSDEETWAGHFLQLL
                     HGVKPPELHRKMLDAALVLYAEHEFNASTFTARVISSTLSDFYSAVTGAIGALRGPLH
                     GGANEEAMALMSQFATPDEAEAGILQRLADKEKIMGFGHRVYKVRDPRSPIIKRWARQ
                     LSEAAGDGRLYAIAERIEAVMWREKRLFPNLDFYSAVAFHRAAIPTPLFTPLFVFSRI
                     TGWAAHIIEQRADNRLIRPLAEYTGPPPRPYPPLAER"
     gene            1252..>2162
                     /gene="prpD"
                     /locus_tag="VE844_05370"
     CDS             1252..>2162
                     /gene="prpD"
                     /locus_tag="VE844_05370"
                     /EC_number="4.2.1.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008291406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047547 - 2-methylcitrate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0019629 - propionate catabolic process,
                     2-methylcitrate cycle [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate dehydratase"
                     /protein_id="HZC00796.1"
                     /translation="MPETFDPVLAAIADYVQDAVIESQEAYAMARLCLMDSLGCTLSA
                     LDDADCIKLLKPTVPGTLVPSGARVPGTGWALDPVEAAFHLGCLIRWLDFNDTWLAAE
                     WGHPSDNLGGLLAVADFISRQNRANNAPSFTVRDLLTALIKAYEIQGILALDNSFNRV
                     GLDHVLLVRIATAAVATHLLGGTKADILSALSNAWVDGGSLRVYRHAPNAGMRKSWAA
                     GDATSRGVRLAYLARRGEPGYPTALSATEWGFQEVFCKGKPISLSRPLGSYVIENILF
                     KVFPAEYHAQTAIEGALQLYPQVKDRS"
BASE COUNT          412 a          642 c          634 g          474 t
ORIGIN      
        1 tctgtaagcg aatcacccag ctcgaaccag ggggtcgggg gttcgagtcc ctccgggtac
       61 gccacgtaat tcaagcacga ttgacggcct accgggcgcc tgattgcata cgggtgtttc
      121 aggtgatgct atgacgttca aagctgcagg attagatgat gttgtcgccg gccaaaccgc
      181 cattgccacg gtgggcaagg caggagccgg tttgacctat cgcggttatg cgattgaaga
      241 cttggccggg cagtctacct ttgaagaggt tgcctatctc ttgctgtatg gcgtcttgcc
      301 caacgcctat caacttcagt cttaccaaga agcgttgcgg cgtctcaggg atcttccgcc
      361 accgcttaaa acggtgctgg aacaacttcc cggagatacc catcccatgg acgtgctgcg
      421 caccggctgc tcggcgttag gagcgctcga gccggaagga cccaagcgcg acgccgttgc
      481 cattgcccat cgtctgttcg cgtgtctgag ctccatgctg ctttattggt atcattttca
      541 ccagggtaac acgcgccttg ccatcgactc cgacgaggaa acgtgggcgg gccattttct
      601 gcaactgctc catggcgtga aaccacccga gctgcatcgg aagatgctcg acgccgccct
      661 ggttttgtac gctgaacacg agttcaatgc gtccacgttc actgcacgcg tgatcagctc
      721 gaccttgtcg gatttttact cagccgtgac cggcgccatt ggcgcattgc gcggcccact
      781 ccacggaggc gcgaacgagg aagcgatggc cctgatgtca caattcgcca cgcctgacga
      841 ggccgaggcc gggatcctgc aacggcttgc cgacaaggaa aagatcatgg gcttcggcca
      901 ccgggtttat aaggtccgcg atccccgctc tccgatcatc aagcgctggg ccaggcaact
      961 ctccgaagcg gcgggagatg ggcggcttta cgccatcgcc gaacgcatcg aggcggtcat
     1021 gtggcgggaa aaacgcttgt tcccgaatct cgatttctat agtgcggtcg cttttcatcg
     1081 ggcagctatc cctacccccc tgtttacgcc tttgttcgta ttttcccgga tcacgggctg
     1141 ggcagcgcat attatcgaac agcgggcaga caatcgactc atccgtcccc tcgccgaata
     1201 taccggcccg ccgccgcggc cgtatcctcc actggccgag cgctgaacag catgcccgaa
     1261 acgttcgatc ctgtactggc tgccatcgcc gactacgttc aagacgccgt catcgaaagc
     1321 caggaggcct atgccatggc gcgcctttgc ctcatggata gcctgggttg cactctatca
     1381 gccctcgatg atgccgattg cataaagctc ctcaaaccca ccgtgccagg caccctcgtg
     1441 ccgagcgggg cgcgtgtgcc gggaaccggg tgggccttgg atcccgtgga agcggccttc
     1501 catctcggct gtttgatccg ctggctcgat ttcaatgaca cctggctcgc cgcggagtgg
     1561 ggacatcctt cggataatct cggtggactg ttagcggtgg cggactttat cagtcgccag
     1621 aacagggcaa acaacgcgcc ctcttttacg gtaagggatt tgttgaccgc tctgatcaaa
     1681 gcctacgaga tccaggggat cttggccctg gacaatagct tcaatcgagt gggtctcgat
     1741 catgtcttgc tcgtgcgcat cgcaacagcc gcggtagcca ctcacttatt gggaggcacc
     1801 aaagcggata tcctgagcgc gctgtccaat gcctgggttg atggcgggag tctgcgcgtc
     1861 tatcggcatg ccccgaacgc cggtatgcgt aaatcctggg cggcgggtga tgcgacgagc
     1921 cgcggtgtgc gtctggctta tttggcgaga cgcggcgagc cgggctatcc tacggctttg
     1981 tcggcgactg agtggggatt tcaggaggtg ttttgcaagg gcaaaccgat ctccctgtcc
     2041 cgtcccttgg ggtcgtatgt gatagaaaat atcctgttta aggtatttcc ggccgagtac
     2101 catgcccaga cagccattga gggggctttg caactctatc cgcaggtcaa agaccgctcc
     2161 ga
//
LOCUS       DASQSL010000529         1647 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_155345, whole genome shotgun sequence.
ACCESSION   DASQSL010000529 DASQSL010000000
VERSION     DASQSL010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1647
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155345"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..476
                     /locus_tag="VE844_05375"
     CDS             <1..476
                     /locus_tag="VE844_05375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00797.1"
                     /translation="GNLGGQSELIQKLSSMPNVHLLGGKPVRALPAYTQHLDVCLLCY
                     KVNDYTKFIYPLKLHEYLASGRPVAGSPIRSLQEFAHIIRLARTTDEWSQALTDLLAP
                     AACSAEQVEARRAVARQYDWDRLVAIIARIFCDRLGPSYLHRFEKISPSEQVLCC"
     gene            730..>1647
                     /locus_tag="VE844_05380"
     CDS             730..>1647
                     /locus_tag="VE844_05380"
                     /inference="COORDINATES: protein motif:HMM:NF025104.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HZC00798.1"
                     /translation="MALVILANYLAFWLRFDGIIPQPQLELFAQMLPWLVAVRGLIFF
                     PFRLYEGIWRYTSTWDLRNIVAGVLTSTVAFYILSHWIFGIKEYPRSILIIDIGILIF
                     FMGGIRLTGRVYRGMGQVKREKRVLIYGVGDAGEMIVRDMKNNGAFYSYEPVGFVDDD
                     PSRIGQRIHGVSVLGTREDLPKVMLTAKPHEVLLAIPRLRPSIIREIVKALEPFKVPI
                     KTLSNPSDIRNGLHALNQIRNLAVEDLLDRAPVGLDLEPVRQLARGKRVLVTGAGGSI
                     GSELSRQIAAFEPEMLVLLDKSEAALYGID"
BASE COUNT          345 a          459 c          461 g          382 t
ORIGIN      
        1 ggggtaatct tggcggacag agtgagttga tccaaaagct ctcctcaatg cccaatgttc
       61 acctcttggg cggcaaaccg gtccgcgcgc tgccggctta cactcagcat ttggacgtct
      121 gcctgctgtg ctacaaagtg aatgactata caaagttcat ctacccgtta aagctgcatg
      181 aatacctggc cagcggtcgc cctgtggccg gttccccaat ccgttccctg caggagtttg
      241 ctcacatcat caggctcgcc cgaacgacag acgagtggtc acaggctcta accgacttac
      301 tggcccccgc tgcttgctcc gccgagcagg tcgaggcccg tcgagctgtg gcccgtcaat
      361 atgattggga ccggctggta gcgattatcg cccgtatctt ctgtgaccgg cttggccctt
      421 catatctaca ccggtttgag aagatctcgc ctagcgaaca ggtcctgtgt tgctagtagc
      481 ggacaacacc ctgacctctg agttccgaga aagacagctc gcatgagcgt cgtcctctat
      541 ttaacgggat gtttccgacg cattatgccg aagaagatga gactcacaag cgagtatctc
      601 aggccgttcc agtggctcct caagtctacc tggagctcaa agattctgcc cacaccgttc
      661 gggtgttggg cgtctagggt cgccctattg ctcctccgat accgccggcc gctcctcata
      721 ttactccata tggccttagt cattctcgcc aattatctgg cattctggct caggttcgac
      781 gggataattc cacagccaca actggagttg ttcgcgcaga tgctgccctg gctcgtagcc
      841 gtccgggggt tgatcttctt cccgtttcgg ctctatgagg ggatctggcg ctacaccagt
      901 acttgggatc tgcgcaatat tgtcgcgggg gtcctcacca gtacagtggc gttctatatt
      961 ttgagccatt ggattttcgg cataaaggaa tatcctcggt cgatccttat tatcgatata
     1021 ggaatactaa tctttttcat gggagggatt cgcttaacag ggcgggtcta tcggggaatg
     1081 gggcaggtca aacgcgagaa acgggtctta atctacggcg tcggggatgc cggggagatg
     1141 atcgtccggg acatgaagaa taacggcgct ttctacagtt atgagccggt cggcttcgtg
     1201 gatgacgacc cgtccagaat cggccagagg atccatgggg tcagcgtttt agggacgcgc
     1261 gaagacctcc cgaaggtcat gctcacggca aaaccccatg aagtgctgtt ggcgattccc
     1321 cgcttgcggc cgtccataat ccgtgaaatc gtcaaggccc tggaaccttt taaagtaccg
     1381 atcaaaacgc tgtccaaccc gagcgatatc cgaaacggcc tgcatgcctt aaaccagatt
     1441 cgtaacctgg cagtagagga cttgctggac cgagcgccgg tagggttaga cttagaaccg
     1501 gtgcgacagc tagccagggg caagcgcgtc ctcgtaactg gcgccggggg ctcgatcggc
     1561 tccgagctca gccgtcaaat cgcggcattc gagcccgaga tgctggtgtt gctggacaag
     1621 agcgaggccg cattgtacgg catcgat
//
LOCUS       DASQSL010000530         2129 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_181767, whole genome shotgun sequence.
ACCESSION   DASQSL010000530 DASQSL010000000
VERSION     DASQSL010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2129
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181767"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..376
                     /locus_tag="VE844_05385"
     CDS             <1..376
                     /locus_tag="VE844_05385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00799.1"
                     /translation="KGTVYYINDSNLQGFGFEPCAPNLLQWLLFLQNYLEACLLLTLS
                     KRKLSLVNIGNVCRVKAMAVDLLPYKEKYAIYLRCLENEKAALLQLRSPDALPRRGPS
                     LIPSATRLSAWQKVDKRAVGSN"
     gene            complement(373..885)
                     /locus_tag="VE844_05390"
     CDS             complement(373..885)
                     /locus_tag="VE844_05390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012505489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIA family hydrolase"
                     /protein_id="HZC00800.1"
                     /translation="MIASLVRDKARPIRLVLTDCDGVLTDGGVYYSERGEELKRFLIR
                     DGMGVERLKKLADVETGIVTGELSPSVKRRAEKLGIEECHLGVKDKAALVQSIAARRG
                     IPLSAIAYIGDDVNDLEAFSLVGLSACPQDALEVVKERADLVCCLKGGEGAFREFAEV
                     IVAARTSAAR"
     gene            complement(899..>2129)
                     /locus_tag="VE844_05395"
     CDS             complement(899..>2129)
                     /locus_tag="VE844_05395"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013220803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HZC00801.1"
                     /translation="GTLYFISDRTGWWNLYRWQQGMISPVVQMQAEFGVPLWQFREST
                     YAFASARQIICTYSQDGLSHLASIATASGKLEVIETPYTDIGSIRANSKQVVFLAASP
                     TEFASVVQMDLTSGTIQVLRRASAVDLDPGFVSVGEPIEFPTENNLTAYGFFYPPTHA
                     EFTGPPEERPPLLVISHGGPTSAAHNGLRLPIQYYTSRGFAVLDVNYGGSTGYGRAYR
                     QRLNGQWGIVDVDDCVNGALYLANQGTVDRNRLAIRGGSAGGYTTLAALTFRDAFKAG
                     ASHYGISDLETLARDTHKFESRYLDKLIGPYPERADLYRQRSPIHAVERLSCPMIFFQ
                     GLEDKVVPPNQAEMMVAALKNKGLPVAYLAYEGEQHGFRRAENIKRTLDAELYFFSRV
                     FDFELADPVEPVTIDNL"
BASE COUNT          480 a          632 c          572 g          445 t
ORIGIN      
        1 caagggaacg gtctactata tcaatgactc gaaccttcaa ggatttggtt ttgagccctg
       61 tgccccgaac ctcttgcagt ggctcctatt tttgcagaat taccttgagg cctgcctatt
      121 gctcacccta tcgaagagaa agctatcctt ggtgaatatc ggcaacgtct gccgcgtcaa
      181 ggcgatggcc gtggatctac tgccctataa ggaaaaatac gcgatctatc taaggtgttt
      241 agagaacgaa aaagccgccc tgcttcaact tcgatcccca gacgccctgc ctcgccgggg
      301 accctcactt attccttctg caacgaggct atccgcgtgg cagaaggtag ataagcgagc
      361 ggtgggctcc aattagcgag ccgcgcttgt acgcgcagcc acgatcacct ccgcaaactc
      421 cctgaaagcg ccctcaccac ccttaagaca gcagacgaga tcggcccttt ccttcaccac
      481 ctcgagggca tcctgcgggc aggcggacag acccaccaga gagaaggcct ccagatcgtt
      541 tacatcgtcg ccgatatagg cgatcgcgct caaaggtatc ccgcggcgtg cggcgatcga
      601 ctgcaccagg gcggctttat ccttaacccc gagatggcac tcctcaatcc ccaatttctc
      661 cgcacgtctt ttcaccgagg gcgatagctc accggtgaca atcccggtct ccacatcggc
      721 aagcttcttt aatcgctcta cccccatgcc atcgcgaata agaaatcttt tcagctcctc
      781 gccacgctcg gaatagtaca ccccgccatc ggtcagcaca ccatcgcagt cggtcaggac
      841 cagcctgata ggccgcgcct tatccctgac caggctggcg atcactggtg tccccccgct
      901 aaaggttgtc tatcgtcacg ggctcaaccg gatcggcaag ctcaaaatcg aacacccgtg
      961 agaagaaata gagctcggca tcgagggtgc gcttgatatt ctctgcccgg cgaaaaccgt
     1021 gctgctcgcc ttcataggcg agataggcga ccggcagacc tttgtttttc aatgccgcaa
     1081 ccatcatttc ggcctggttc ggcggcacca ccttatcttc cagtccttga aagaagatca
     1141 tcgggcacga caggcgctct accgcatgga tcggtgagcg ttgccggtag agatcggccc
     1201 gctcgggata gggaccgata agcttatcta aataacgcga ctcaaattta tgggtgtcgc
     1261 gagcgagcgt ctcgagatcg ctgatcccat aatgactggc accggcctta aacgcgtctc
     1321 ggaaggtgag ggcagccaag gtcgtgtagc ctccggcact gccgccccgg atggcgaggc
     1381 ggtttcggtc cactgtaccc tgattggcga gataaagggc gccgttgacg caatcatcga
     1441 catcgacaat gccccactgg ccgttcaggc gttgtcgata agcccggcca taaccggtgc
     1501 tgccaccgta atttacatcc aagaccgcaa agccgcggct ggtgtaatac tgaatgggga
     1561 gcctcaagcc gttatgggcg gcgctcgtag gcccaccatg gcttatcact aaaagcggcg
     1621 gcctttcctc gggcggtccg gtgaattcag catgggtcgg cggatagaag aaaccgtagg
     1681 ccgtaagatt gttctcggtc ggaaattcaa tgggttctcc aacggagaca aagccgggat
     1741 caagatccac ggcactcgct cgcctcaaga cctggattgt gcctgaagtg agatccatct
     1801 gcacgacgga ggcaaactcg gtcggcgatg cggctagaaa taccacctgc ttgctgttgg
     1861 cccgtattga tccaatatcc gtgtaaggtg tctcaatgac ttcaagcttg ccagacgctg
     1921 tagcaatgct cgcgagatga ctgagcccgt cctgcgaata ggtgcagatg atttggcggg
     1981 cagaggcaaa ggcgtaggtc gattctctga actgccacag cggcacaccg aattcggcct
     2041 gcatttgcac tacaggtgag atcatgccct gttgccaacg gtagagattc caccagccgg
     2101 tgcgatcgga gatgaagtac agtgtcccg
//
LOCUS       DASQSL010000531         1587 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_84579, whole genome shotgun sequence.
ACCESSION   DASQSL010000531 DASQSL010000000
VERSION     DASQSL010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84579"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(125..1135)
                     /locus_tag="VE844_05400"
     CDS             complement(125..1135)
                     /locus_tag="VE844_05400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC00802.1"
                     /translation="MVSARTGTAYAGIRTERTISLRGAVALAEGMGIRATGRLLDVDK
                     DTVNQWLPVLGRHCQGIMHDFFRHWHLRECQLDELWTFVAKKEDQLTRLEKLATVYGD
                     AWVWIAFSPVCKLVPAWVVGKRTLQDARRLVFRLKSATDGSIPFFTSDALPHYADALL
                     EGYGVWGTPPRQGTRGRLPKPRRYPPPDLCYAVVVKERARGRVVHVTTRIVYGTTEQI
                     EAALQASPVSHTINTYGVERNNLTVRQHARRMGRKVNAFSKDQDYLESQLTLAFAYYH
                     FVVPHRSLRQRLPHPIPTKGHNGSPKKWKPVTPAMAAGLTDHVWTMDELLSFRVPPDA
                     SW"
     gene            complement(1251..>1587)
                     /locus_tag="VE844_05405"
     CDS             complement(1251..>1587)
                     /locus_tag="VE844_05405"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00803.1"
                     /translation="GLKVLVVRYGAKYYATNRLRLPAAEVRRLYRVRSQIEEVIRVCK
                     DQLGLTGCQARSERAQQHHMACCLVAFCVLERERHDQHLSIYKLKRQLSFKGRSLALP
                     ALERIRGAA"
BASE COUNT          315 a          462 c          487 g          323 t
ORIGIN      
        1 tgcagccaag tgatgggtgt atatctgcgg gatccgccat tttgtcgcct tgaagtcttg
       61 ttttttggca gcctgcgggg aatggggtag tgtccctata acgggtgaaa gctccactgg
      121 gcgattacca tgatgcgtca ggtggtacac gaaagctcag caattcatcc atggtccaga
      181 catgatcggt caggccagca gccatggctg gggtcacagg cttccacttc ttgggcgatc
      241 cgttgtggcc tttagtgggg atagggtggg gtaagcgttg tcgcagactg cggtgtggga
      301 caacaaaatg gtagtacgca aacgcgaggg tgagttggga ctccaagtag tcctggtctt
      361 tggagaaggc attgaccttc cgtcccatcc gccgtgcatg ctggcgtacc gtcaggttgt
      421 tgcgctccac cccgtacgta ttgatcgtgt ggctgacagg cgaagcctgc aaggcggctt
      481 caatttgctc agtggtccca tagacaatac gagtggtcac gtggaccacc cgaccgcgtg
      541 cgcgttcttt gacgacgacc gcgtagcaca agtcgggcgg tgggtaacgg cgcggtttgg
      601 gcaaacgccc gcgtgtccct tgtcggggcg gtgtgcccca caccccatac ccctccaaca
      661 aggcgtcggc gtagtggggc agtgcgtcac tggtgaagaa cggaatggac ccgtcggtcg
      721 ccgatttcag ccgaaacacc agccggcggg cgtcctgtaa ggtccgcttg cccacgaccc
      781 aggcagggac cagtttgcac acggggctga aagcgatcca tacccaggca tcgccataga
      841 cagtggccag tttctccagc cgcgtcagct ggtcttcctt cttcgcaaca aatgtccaca
      901 actcgtccaa ctgacactcg cggagatgcc agtggcggaa gaaatcgtgc atgataccct
      961 gacagtgccg ccccaagact ggcagccact gattcacggt atctttgtcg acgtccaata
     1021 gccgtcccgt ggcgcggatg cccatccctt ccgccagggc taccgccccg cggagagaga
     1081 tggtgcgctc cgtccgaata cccgcatagg ctgtgcctgt acgcgccgat accaaagcac
     1141 gacaggctcg gcaacgccag cgtggagcct gccgatgcca atcatgccag gtgaattgtg
     1201 ctcgcggagc cacttggcca aagaggggac attgcggcat atgacagagg ttacgcagct
     1261 cctcttatgc gctccagggc cgggagtgca agggagcgtc ctttgaaact gagctgtcgc
     1321 ttgagtttgt atatactgag gtgctgatca tgtcgttccc gctccagcac gcaaaaggcc
     1381 acgaggcagc aggccatgtg gtgctgttga gccctctccg agcgcgcttg acagccggtc
     1441 aggcccagtt gatccttgca gacgcggatg acttcctcga tctgcgagcg cacccgatac
     1501 aaccggcgca cctccgcagc cggcaagcgc aggcgattgg tggcgtagta cttggcgccg
     1561 tatctgacaa ccaagacttt caggccg
//
LOCUS       DASQSL010000532         1170 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_58688, whole genome shotgun sequence.
ACCESSION   DASQSL010000532 DASQSL010000000
VERSION     DASQSL010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58688"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            509..1075
                     /locus_tag="VE844_05410"
     CDS             509..1075
                     /locus_tag="VE844_05410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00804.1"
                     /translation="MSEEFLGDRRKALEEEFFAKQNQRLLRQLRETMAAKATHEALAA
                     ASGITDAAVLAQLAAVDLSSETMAALALVPLVEVAWADGTLDAKERSALLAAAEHARL
                     SQDSASYQLLEAWLRERPSPKLLAAWKAYVAGLSRTLDVHGKAALKQDLLGRARVIAE
                     AAGGILGLGKRISSAEQAVLTELEHAFA"
BASE COUNT          243 a          329 c          375 g          223 t
ORIGIN      
        1 ataggagctc tcttctgcaa ggaacgggtg ttggttgctt cgttcaccct tgagggtgca
       61 tagatatgct gcggttatgg tagggagaaa gcgggactgt agcaagggtg tctatggtga
      121 tctatcgacg catcatggag cttgcaggag agaatttgca aacacgctct aaacctacca
      181 gaccgtagaa aggttcctcc tggttcacag acatcaatgc ttcttcggac atctgttggg
      241 taatctctcc ctgaactggc gaatcttctg gtgatccatg aagcttctgg cattctttca
      301 gcagacaaat cgggcagtag cgcgtaccac cgccagatct gactcaccct gtggccggaa
      361 gatgtgatgc gtgaatgccg cgacccagag taagatgttc ctcatgcagc cttcacgaaa
      421 gtgggtctac aggactgcgg gatcgggcca ccacgatgtc tcttggcagg cgtggatcgg
      481 ccctctcccg cgccgagagg agagacacat gagcgaggaa tttctgggcg accgccgcaa
      541 agcattggag gaagaatttt ttgccaagca gaatcagcgg ctcttgcggc agttacggga
      601 gacgatggcg gcgaaggcaa cacacgaagc actcgcggcc gcgtctggta tcaccgatgc
      661 cgcggtgctt gcgcaactgg cggccgtcga cctgagcagc gagaccatgg ctgccctggc
      721 tcttgtccca ctcgttgaag tcgcctgggc ggacgggacg ctcgatgcca aggagcgcag
      781 cgcccttctc gcggcggcgg aacacgcgag gctcagccaa gacagcgcca gctaccagtt
      841 gctcgaggca tggctcaggg aacggccatc cccgaagttg ctcgccgcct ggaaagccta
      901 cgtcgccggc ctctcaagga cgctggacgt ccacggcaaa gcagcgttga agcaggatct
      961 gctcggacgc gcccgtgtga tcgccgaggc agccggtggc atccttggcc ttgggaagcg
     1021 gatctccagc gccgaacaag ccgtgctgac ggagctggag cacgcctttg catgagggga
     1081 gcctgcggag ggcgagtcat ggccaagcag ggtgggttgg aggtctggcc ccgtcttcct
     1141 gtccacgaga gggccatgaa aaccgcgccg
//
LOCUS       DASQSL010000533         2593 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_4631, whole genome shotgun sequence.
ACCESSION   DASQSL010000533 DASQSL010000000
VERSION     DASQSL010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2593
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4631"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(110..523)
                     /locus_tag="VE844_05415"
     CDS             complement(110..523)
                     /locus_tag="VE844_05415"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015437844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HZC00805.1"
                     /translation="MMDKQEPVNLPKDQQPTLRIVPMPADTNYEGSIFGGWILSQVDI
                     AGSIVAIQRARGRVTTVAVNSVEFHEPVFVGDVISCYAEVVRVGRSSITVKVDVYAER
                     NPERVQVIQVTQAMLTYVALDKDLRPRRVLPEENA"
     gene            complement(525..2582)
                     /locus_tag="VE844_05420"
     CDS             complement(525..2582)
                     /locus_tag="VE844_05420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013033424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HZC00806.1"
                     /translation="MATEQKYKHWHSEVDGNGIVWLHLDQQGTTTNVLSSEVLRELKG
                     VLEELEATPDRQPRGLVILSAKPSGFIAGADVREIAAIQDADQALDLIRTGQSIFNRI
                     ESLPFPTLALIRGFCVGGGLELALACRYRVALNHPQTRLGLPEILLGIHPGFGGTMRL
                     TRLLGAPAAMDLMLTGRTVDARTAARLGLVDRAVPERHLKAVAIEMILESPKPHKLRF
                     FSRFMNFSWVRPAFAWYLRRQVAKRASPAYYPAPYTLIDLWQQHTDDPQRMLEEEAKS
                     VASLITRDTSANLVRVFFLQERLKSLGRSHDFSFRKVHVIGAGTMGGDIAAWCALQGF
                     EVTLQDRAPHYIAPALKRAYELFSKRLSDRRLKQAALDRLVPDQKGLGLPQADVVIEA
                     IIEDIHAKQTLCREIEPKLKPGALLATNTSSIRLETLGETLSRAERLVGLHFFNPVAK
                     MQLVEVVSSSNTDRELAADAAALVRRIDHLPLPVKSSPGFLVNRVLLPYMLESFEVLA
                     EGVTAGTIDRAAREFGMPMGPLALADTVGLDICLAVTEVLGRELGIAVPARLRELVAQ
                     GRLGRKTGRGIYDYRTGRAGQTLQNILAVAPSEEIQDRLVLRMLNEAVACLREGVVQE
                     ADLLDAGLIFGAGFAPFRGGPLHYAKTRGIEAIQARLGELERKHGERFRPDAGWSMLA
                     AAT"
BASE COUNT          572 a          820 c          696 g          505 t
ORIGIN      
        1 tctggacatt tcgagagttg ctcacagcta aattcgagcc tattcattat caaagtatta
       61 gcggatgagt accaaaccac attgacatag cactaatctc catgagcgct taggcgttct
      121 cctcgggcag caccctccgc ggcctcaaat ccttatccaa tgccacatag gtcagcatcg
      181 cttgggttac ctggatcacc tggacccgct cgggattacg ctccgcatag acatcgacct
      241 tgactgtgat cgagctccgg ccaacgcgta cgacctcggc ataacaactg atgacatccc
      301 ctacaaagac cggctcatgg aactccacag agttgaccgc cacggtggtc acccgccccc
      361 gtgcccgctg gatcgccacg atgctcccgg cgatgtccac ctgggagagg atccaaccgc
      421 cgaagatact gccctcatag ttagtatcgg ccggcatggg cacgatccgc agggtgggct
      481 gctgatcttt tggaagattc actggctctt gcttatccat catctcacgt cgctgccgcc
      541 aacatcgacc aaccggcatc cggcctgaag cgctcgccat gtttgcgttc gagctcgccg
      601 agccgcgctt gaatcgcctc tatgccccgg gtcttcgcat aatgcagggg acctcctcgg
      661 aaaggcgcaa acccggcccc aaagatcaga cctgcatcca acagatcggc ttcttggacc
      721 accccttccc ggagacacgc caccgcctca ttgagcatcc ttaacaccaa gcgatcctgg
      781 atctcctccg aaggggctac agccagtatg ttctggaggg tttgcccggc ccggcccgtg
      841 cggtaatcat agatccctcg gcctgtcttg cgtccaagcc ggccttgcgc caccaactcc
      901 cgtaagcgag ccggcaccgc gatacccagc tcgcggccca ggacctcagt gactgcaaga
      961 cagatatcga gcccaactgt atcggcaagc gctaacggtc ccatcggcat accaaactcc
     1021 ctagccgcac ggtcgatggt ccccgccgtt accccttcag cgagtacctc gaaggactcg
     1081 agcatatagg gaagcaggac ccgattgacc agaaatcccg gcgaactctt gacgggtaac
     1141 ggcaagtgat cgatacggcg taccaaagcg gcggcgtctg cggccaattc ccgatcggta
     1201 ttgctgcttg agactacctc cacgagctgc atcttagcga ccggattaaa gaaatgcagg
     1261 ccgaccaagc gctcagctcg gctgagcgtc tcacccaagg tttcgaggcg gatactcgag
     1321 gtattggtcg cgagcaaagc ccccggcttt aacttaggtt caatctcgcg gcaaagagtc
     1381 tgcttggcat ggatatcttc gatgatcgcc tcgatcacca catcggcctg cggcaggcct
     1441 aaacccttct ggtccgggac caagcgatcg agggcggctt gcttcaagcg gcgatccgaa
     1501 agacgcttgc tgaagagctc ataggcgcgt ttcaaggccg gcgcgatata gtgaggtgcg
     1561 cggtcctgca gggtcacttc gaacccttgc agggcgcacc aggcagcgat gtccccgccc
     1621 atggtaccgg ctccgatcac atgtaccttg cggaagctga agtcatggct gcggcccagg
     1681 gatttcaggc gttcctgcag gaaaaagacc cgcaccagat tggcggaagt atcacgggtg
     1741 atcagcgaag ctaccgattt tgcctcttct tccagcatac gctgcggatc atcggtgtgt
     1801 tgttgccaga gatcgatgag ggtgtaagga gcgggataat aggcgggaga agcgcgtttg
     1861 gccacctgcc gacgcaggta ccaggcaaaa gcgggccgca cccaagagaa attcataaat
     1921 cgtgagaaga accgcagctt atggggttta ggagactcca ggatcatctc tatcgctacc
     1981 gccttgagat gccgctcagg cacagcgcgg tcgacgagcc cgagcctcgc cgctgtgcgc
     2041 gcatccaccg tccggccggt taacatgaga tccatcgccg cgggtgcgcc aaggaggcga
     2101 gtgaggcgca tcgtccctcc aaaccctgga tgaataccca ataggatctc cggcaagccc
     2161 aagcgggtct gtggatgatt gagagccacc cggtaacggc aggcaagcgc cagctccaat
     2221 cccccgccca cacaaaaccc ccggatcagc gcgagcgtcg gaaaaggtaa agactcaatc
     2281 cgattaaaga tggattgtcc ggtcctgatt aaatcaaggg cctggtcggc atcctggatc
     2341 gctgcgatct cacggacgtc tgcgccagcg ataaaaccac tgggcttagc ggagaggatc
     2401 accagccccc gcggctgacg atctggagtc gcctcaagtt cctccaagac ccccttgagc
     2461 tcccgcaaca cttcactcga cagcacattc gtcgtcgttc cctgctgatc gagatgcagc
     2521 caaacaatcc cgtttccatc cacttccgag tgccaatgct tatatttttg ttctgtggcc
     2581 atggaccttc tcc
//
LOCUS       DASQSL010000534         1238 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_194334, whole genome shotgun sequence.
ACCESSION   DASQSL010000534 DASQSL010000000
VERSION     DASQSL010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1238
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194334"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(257..742)
                     /locus_tag="VE844_05425"
     CDS             complement(257..742)
                     /locus_tag="VE844_05425"
                     /inference="COORDINATES: protein motif:HMM:NF015365.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HZC00807.1"
                     /translation="MNPAVLQHLHPDQLEVEICRSEELAQRRGLTSELDEMWSYVGKK
                     ANPRWLWHAIDHHRGTLLAYVFGRRQDEVFLQLQALLEPFGIRRFYTDGWGAYERYIE
                     PERHAVGKQYTQKIESKHINLRTRIKRLVRRTICFSKTTTMHDLVIGLFINRYEFGRC
                     L"
     gene            complement(739..1026)
                     /locus_tag="VE844_05430"
     CDS             complement(739..1026)
                     /locus_tag="VE844_05430"
                     /inference="COORDINATES: protein motif:HMM:NF024169.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HZC00808.1"
                     /translation="MITQVLHCPYCHGTDIVRHGTTPEGKQRYRCRACPPRGHTFLLE
                     YSYPGQSQHVKHQIVEMAMNASGIRDTARVLHVSPTTVIKELKKRKLTCTR"
BASE COUNT          270 a          329 c          348 g          291 t
ORIGIN      
        1 gtaataccta cagcatgttc cgcaaccagg atagaagcgt ctacctcctg cagggcagcc
       61 cagctctcca gaagaatttg ctgggcaagc tctccaccca cttcatggaa cctgaggaaa
      121 tttatctcta gccggtccaa acggatttgt atgttggcac tgaactctgg caggagacag
      181 ctaacgttgg catcggctaa cggaggtgca acatacgtga taccgtggaa ggtgtttcag
      241 agctgttgat ttcatatcag aggcaccgcc caaactcata gcgattgatg aagagaccga
      301 tcacgagatc gtgcatggtt gtcgttttgg aaaagcaaat cgtgcggcgc acgagccgct
      361 tgatccgtgt ccgcagattg atatgcttgc tctcgatttt ctgggtgtat tgtttgccga
      421 ctgcgtgcct ctcgggctcg atatagcgct cgtaggcgcc ccacccatcg gtgtagaaac
      481 ggcggatccc aaaaggttcg agcaacgctt gtagctgcag gaagacctca tcctgccgtc
      541 tcccaaagac atacgctaac aatgtgccgc ggtggtgatc gatggcatgc cagagccagc
      601 gcgggttcgc tttcttgccc acatagctcc acatctcatc gagctctgac gtcaacccac
      661 gacgttgcgc aagttcctcg gatcgacaaa tctccacctc tagctggtcg ggatgcaggt
      721 gctgcaacac ggcaggattc accgggtgca ggtcagcttc ctttttttga gttctttgat
      781 gacggtggtg gggctgacgt gcaacacccg cgccgtgtcc cgtataccac tggcattcat
      841 ggccatctcg acgatctggt gtttgacgtg ctgggattga ccaggatagg aatattcgag
      901 gagaaacgta tgcccgcgag gcgggcatgc acgacatcga taccgttgct tgccttcagg
      961 cgttgtgcca tgcctgacaa tatcggtccc gtggcaatag gggcagtgca gcacttgcgt
     1021 aatcatggct ccctccctca cattggttta tctctttgag agggtagcag atctacagct
     1081 ctgaaacatc ttctgagggc tttacgtttg ccaatggcgc tgtcacagaa gggatcgtgc
     1141 ggcgtgggcc tgacagcggc tcggccgaag atgacgctgc aggagatatc tcaggtcagg
     1201 cgatgatgcg gggccaaagt actgtccatg aacgactg
//
LOCUS       DASQSL010000535         1238 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_99517, whole genome shotgun sequence.
ACCESSION   DASQSL010000535 DASQSL010000000
VERSION     DASQSL010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1238
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99517"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..940
                     /locus_tag="VE844_05435"
     CDS             <1..940
                     /locus_tag="VE844_05435"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC00809.1"
                     /translation="YRTVRAYHKGTLGWEYDAQGRLLPPLRTRVLLPTLRRSLVALLK
                     ATPRAYGWCRTRWSCATLAMTLQTKRGVVVSAETMRRWLHEIGWVWKRAKLVAKDDDP
                     QRVDRLARIRFVYERLHRGEAMVCADELDIHLLPKVGCAWMSKGTQLEVMTPGQNQKH
                     YLAGALDLATGTLHHCLGARKTTALFRDLLGVLDERYPAEQYTRLYVVVDNYRIHKAK
                     AVKQWLANHPRFTLLFLPTYCPRANPIERAFGDVHDCCTRNHQRKRLPELIADVEGHL
                     RLNGPWQYKLSDLYYAPAVTVAGENIIAEEQAKVAA"
BASE COUNT          260 a          360 c          374 g          244 t
ORIGIN      
        1 gtatcgcacg gtacgtgcct atcacaaggg cacgcttggc tgggaatacg atgcgcaggg
       61 gcggctcctg ccacccctgc gcaccagggt gctgctgccg acactgcgac ggtcgctcgt
      121 ggccctgctc aaagccaccc cacgggccta tgggtggtgc cgcacacgct ggagctgcgc
      181 cacgctggcc atgacgctgc aaaccaagcg aggggtcgtg gtctcggccg agaccatgcg
      241 gcgctggctt cacgaaatcg gctgggtctg gaagcgcgcg aagctggtag ccaaggacga
      301 cgaccctcaa cgggttgacc gcctggcccg catccgcttc gtgtacgagc ggttgcacag
      361 gggagaggcc atggtgtgtg cggatgaact ggatattcac ctgttgccca aagtggggtg
      421 cgcctggatg tctaaaggga cccaactgga ggttatgacg ccgggccaga accagaagca
      481 ctacttggcc ggggcactcg atttggctac cggcacgctg caccactgcc tcggggcgcg
      541 caaaaccacc gccctgtttc gtgatttgct cggagtcctc gatgagcgtt atcccgccga
      601 gcagtacacg cgactctatg tcgtcgtgga taactatagg atccataaag ccaaagccgt
      661 taagcaatgg ttggcgaacc atccgcggtt tactctgctc tttttgccga cctactgtcc
      721 ccgcgcgaac ccgattgagc gcgcattcgg cgatgtccat gactgttgca cccgtaacca
      781 tcagcgcaaa cggttacccg agctgatagc cgatgtggaa ggccatttgc gcttgaacgg
      841 cccttggcag tacaagctgt cagacctcta ctatgcgcca gcggtcaccg tagctggcga
      901 gaacatcatc gcagaggagc aagccaaggt cgctgcgtga gtgtaccaat gtcgtatgga
      961 ctgatttaga gacggctggc cttcccatcc ttgctccacg gagccaagtc ttcagcataa
     1021 tgagagcgag gaagaggagc agtgggtttc taagatgatg ggcgctggtg ctcaaagggc
     1081 caagcgttaa ttggtaccct ccctcaaata atacggcgag gaggcttgcg gcagcaaggc
     1141 agagactgca actaaccaac ctttctggga cggatagccc taagacgtcc ccggaaattt
     1201 ttgcgatctt gagcttcgcc cattggttca gcactgac
//
LOCUS       DASQSL010000536         1132 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_166847, whole genome shotgun sequence.
ACCESSION   DASQSL010000536 DASQSL010000000
VERSION     DASQSL010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166847"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..888)
                     /locus_tag="VE844_05440"
     CDS             complement(<1..888)
                     /locus_tag="VE844_05440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009107828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZC00810.1"
                     /translation="MESEDPYVGIDVSKDRLDIAVRPTEDTWSVANDASGIPEVVQRL
                     AQLHPKLVVLEATGGPQMPVAAALASAGMPLSMVNPRQVRDFARATGKLAKTDQLDAQ
                     VLAHFAEAVRPTPYPLPDAQTQELTALLTRRHQVVEMLTAEKNRLRTTRESVRQRVQD
                     HIRWLEQELADLDDDLEHTLRESPLWREKDNLLRSVPGIGRVVSITLLADLPELGNLS
                     RHQIAALVGVAPLNRDSGRFRGKRTVWGGRARVRAVLYMAALTATRYNPIIKAFYHRL
                     CGAGKARKVALTACMRKLLI"
BASE COUNT          227 a          332 c          341 g          232 t
ORIGIN      
        1 gatcaagagc ttgcgcatgc aagcagtcag agccactttc ctggctttgc ccgccccaca
       61 aaggcggtgg taaaaggcct tgatgatagg gttatatcgg gtggcggtta gagcagccat
      121 atagaggaca gcccgcaccc tggcccgtcc accccagaca gtccgtttgc cccggaagcg
      181 gccgctgtct cgattgaggg gggcgacacc taccagcgcg gcaatctggt ggcggctcaa
      241 attgcccagt tcaggaagat cagccagcag ggtgatggac accacccggc cgatcccggg
      301 gacgctacgc agcaggttgt ccttttctcg ccagaggggg ctctcccgca gggtgtgttc
      361 caggtcatca tccagatcag ccaactcctg ttccagccag cggatatggt cttgaacccg
      421 ctggcgcacc gattcccggg tggtccgcag ccgattcttc tcggcagtaa gcatctcgac
      481 gacctggtgc cgtcgggtca ggagggcggt cagttcctga gtttgggcat ctggtagcgg
      541 atatggcgtg ggtcgcaccg cctccgcaaa gtgggccaag acttgggcat ccagctgatc
      601 ggtcttcgcc aacttgccgg tagctctggc aaaatctcga acctggcggg gattgaccat
      661 ggacaagggc atcccagcac tagccagagc agcggccaca ggcatctggg gcccaccagt
      721 agcctccaat accaccagtt tcgggtggag ttgagccaac cgttggacta cctcagggat
      781 tcctgaagca tcgttagcca cactccaggt atcttcggtg ggacgcacgg cgatatccag
      841 tcggtctttg gagacgtcta ttcctacgta aggatcttca gattccaatg gctacctccc
      901 ttctggccct tccttgcaag atgcgggctg gtcaggccca ggcaactgtt cgggctcttc
      961 ccagagatga gctggcgacc caagcttttt tacggtcttg gcggaccagg gggcgagcgg
     1021 tctgccagcc caatgggtca atgctctcta actattggtt cactgtcaaa gatacagggg
     1081 gcaaggatat cgcctacggc tggaaaggta aagggagcac cgtacacctg gt
//
LOCUS       DASQSL010000537         1280 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_112108, whole genome shotgun sequence.
ACCESSION   DASQSL010000537 DASQSL010000000
VERSION     DASQSL010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1280
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112108"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..978
                     /locus_tag="VE844_05445"
     CDS             <1..978
                     /locus_tag="VE844_05445"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZC00811.1"
                     /translation="IDSLTFVGIVDESAQQAAMLAHQGDFHWVRNWGQYNAYVDHDQI
                     RTVLRTTRGHFQVWMNARNEPFDNVRVRQAITMGLDRNAAIAVLQDGHGSPGFLFSPG
                     SAWELDEAQGCAVPGWCVAEDMEAQRAEAKKILEEEGFDFNKTYLFTVESDNQVVARA
                     TFIQEQLRLLGIQTDFDLVETVAYRHQEQNGLWGDFLPRNATMVVDDPTAGLGTYLRC
                     ASVENRWSPGTPCDAKLEGMLDQVDSTADPVKRKAISDEIQLYVMNQYMYFPIYWEQE
                     AAAFWPEVRGYAHFPTPYGFVKFQHVWIDPAHKDDKGFQAESSGIPGGL"
BASE COUNT          271 a          365 c          378 g          266 t
ORIGIN      
        1 attgactcat taaccttcgt cggcatcgtg gacgagtcgg cccagcaggc ggccatgctg
       61 gcccatcagg gcgactttca ctgggtacgt aactggggcc agtacaacgc ctacgtggac
      121 cacgaccaga ttcgaacggt cctccggacg acccggggcc actttcaggt atggatgaac
      181 gcccgtaacg aacccttcga caatgtccgg gtgcgccagg ccatcacgat gggccttgac
      241 cgaaatgcgg ccatagcggt gctccaggac ggccacgggt cccccggctt cctgttttct
      301 cccggcagcg cttgggaact ggacgaggcc caagggtgcg ctgtacccgg ctggtgcgtt
      361 gccgaggaca tggaagccca gcgggctgag gccaagaaga tcttggagga ggaaggtttc
      421 gactttaaca agacctacct ctttacggtg gagagcgaca accaggtggt ggcccgggct
      481 acctttatac aagagcaatt gcggctgctg ggcatccaga ccgacttcga cctggtggag
      541 acggtggcct accggcacca ggagcagaat ggcctctggg gagatttcct ccctcggaac
      601 gctaccatgg tggttgacga ccccaccgcc ggattgggaa cttatctccg ctgtgcgtcc
      661 gttgaaaacc ggtggagccc aggtacgcca tgtgatgcaa agctggaggg gatgttggac
      721 caggtggata gtactgccga tccagtgaag cggaaggcaa tttccgatga gatccagtta
      781 tacgtcatga accaatacat gtatttcccc atctactggg agcaggaagc cgccgccttc
      841 tggcctgaag tgaggggtta cgcccatttc ccaacgccct atggctttgt gaagtttcag
      901 cacgtctgga ttgacccggc tcacaaagac gataagggat tccaggcaga gagctccgga
      961 atacccggcg gtctctagtc tgaacagcca tcgatgccag caagccatct gcccagcata
     1021 gtgagtggct tgctggcaaa tcccaagtcc tctattcgct gagccgagcg aactggctga
     1081 tcaaggtctg tggtaggtaa ttctctcccc tcgtgggagg gtgtccacct ttctctcggc
     1141 cttctcccaa ctgatcagga ggtaggcatg cgcagcattg atattcatgc ccatttaact
     1201 ccccagtgct tcctgcatgc catggctgct ggtaagctgt ggcacggcat aaagcctggc
     1261 actgtgagag tcaaccctag
//
LOCUS       DASQSL010000538         1614 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_181785, whole genome shotgun sequence.
ACCESSION   DASQSL010000538 DASQSL010000000
VERSION     DASQSL010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181785"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..286
                     /locus_tag="VE844_05450"
     CDS             <1..286
                     /locus_tag="VE844_05450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HZC00812.1"
                     /translation="TVREFLLYSGRGTISELPRFVGTPSQVADKMEAWFSSQACDGFV
                     VAATNMPGSYEDLTRLVVPELQRRGLFHQGYRGSTLRENLGLPLPAGGPR"
     gene            complement(403..>1614)
                     /locus_tag="VE844_05455"
     CDS             complement(403..>1614)
                     /locus_tag="VE844_05455"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HZC00813.1"
                     /translation="DGQRARAQFLITAVGLLSAHYVPDFEGLESFRGAWCHTGRWPKE
                     GLDLAGKRVGVIGTGASGVQLITEIAKEVSHLTVFQRTANYCAPLRNGSIDPETQRQI
                     KASYPEIFKRCGETAGSFVHKFDPRSALEVSPEERLEQYERLWAEPGFKKWLANFYDI
                     MLPGEANEDYAEFVRNKIRQRVKDPVVAEKLVPKDHMFGSKRIPCESGYYEVFNQDNV
                     LLVDVREAPIQRITRKGIKTTDAEYELDVIIFATGYDAVTGALNRIDIRGEGGQSLKD
                     KFANGPRTYMGISSAGFPNLFTINAASVGNFVRAAEPLVDWVSECIAYVRDNGYTRIS
                     AIHQAEEEWVKHVNEAGANILRTKADSWFVGANIPGKARALLTSPDSAPVMRAKRAEV
                     AANGYKGFLLQ"
BASE COUNT          328 a          469 c          455 g          362 t
ORIGIN      
        1 gacggttcgg gagttcctgt tgtatagtgg cagggggact ataagtgagt taccgcgctt
       61 cgtggggacc ccgagccagg ttgccgataa gatggaagcc tggttctcga gccaagcgtg
      121 cgacggcttt gttgtagcgg ccaccaatat gccaggttcc tatgaagatc taacacgatt
      181 agtcgtaccg gaactccaaa ggcgcggtct cttccaccag gggtatcggg gcagtaccct
      241 gcgggaaaac cttggcttgc ccctgcctgc tggtggccct aggtaactac cacttacatg
      301 gccagtgtat cgttagtcct agagacttgg gcggcagcct cactcgaggt ggtcgcctaa
      361 cgaagaagtg cgtcttctgc cacatcgtag aggcaggcaa gctcattgaa gcagaaaccc
      421 tttatatccg ttggctgcca cctctgcgcg cttagcccgc atgaccggag cactatccgg
      481 actggtaagc aaggctctcg ctttaccggg aatgttggct cctacaaacc aggagtcggc
      541 cttggtccgg agaatattgg ccccggcctc gttcacgtgc ttgacccact cctcttctgc
      601 ctgatgaata gctgaaatgc gggtatagcc attatctcgc acgtaggcta tgcactcact
      661 gacccaatcc accagaggct cagcagcccg gacgaagttg ccgactgagg cggcattgat
      721 ggtgaagaga ttggggaagc cggcgcttga aatgcccata taagtgcgcg ggccattggc
      781 gaatttgtcc ttcaacgatt ggcccccttc gccccggata tcaatccggt tcaacgcgcc
      841 ggtgacagcg tcatacccag tggcaaatat gatgacgtcc agttcgtatt cggcatctgt
      901 ggtcttgatt cctttacggg tgatgcgctg gatgggggcc tcgcgcacgt caaccagcaa
      961 cacattgtcc tggttaaaga cctcataata cccgctctcg cagggaatgc gcttggaccc
     1021 gaacatatgg tccttgggca ccagcttttc cgccaccact gggtccttga cgcgctggcg
     1081 aatcttatta cggacgaact cggcgtagtc ctcgttggcc tccccaggaa gcatgatgtc
     1141 ataaaaattg gccagccatt ttttgaaacc aggctccgcc cacagcctct cgtactgctc
     1201 caggcgctct tccggtgata cttccagggc cgatcgaggg tcgaatttgt gtacgaacga
     1261 gccggcggtc tcgccgcacc tcttgaatat ctccgggtag cttgccttaa tctggcgttg
     1321 ggtctcgggg tcaatggaac cattgcggag cggcgcacag taattcgccg tgcgctggaa
     1381 taccgtcagg tggctgactt ccttggcgat ctctgtgatt agctggacgc cgctggcgcc
     1441 ggtgccgatg acaccgacgc gcttgccggc taaatccaga ccctctttgg gccagcgtcc
     1501 ggtgtgacac catgcgcccc ggaagctctc cagtccctca aagtcgggaa cataatgcgc
     1561 cgacagcaga ccaacagcgg tgattaaaaa ttgcgcacgt gcccgctgac cgtc
//
LOCUS       DASQSL010000539         1246 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_99540, whole genome shotgun sequence.
ACCESSION   DASQSL010000539 DASQSL010000000
VERSION     DASQSL010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1246
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99540"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            17..1127
                     /locus_tag="VE844_05460"
     CDS             join(17..294,293..1127)
                     /locus_tag="VE844_05460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611896.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZC00814.1"
                     /translation="MSKQRSRYSAQFKFQLALEAAKGLKTLNELASEHNVHPNQISEW
                     KRRLLEGGSTIFSRDGAHSQREHQEREVELYEHIGRLKMELEWLKKTAAPASVEAKRA
                     MIDLGALPISIRRPCELVGLNRSTFYHAPATASAFTLRLMRLIDEQYTKTPFYGWPRM
                     TAYLRRLGLPVNHKRVQRLMRVMGLQAIYPKPRSSTVAKEHKIYPYLLGAVATCRPNQ
                     VWSADITYVRLATGFMYLVAIIDWWSRYVLAWQLSNTLDVAFCLEALERALVQGCPEM
                     FNTDQGVQFTSLAFTSRLERAGIAISMDGRGRALDNIFVERLWRTVKYEDIYLNDYVS
                     IPALAVGLDRYFMFYNHERPHQSLTYRTPAEAHGKR"
BASE COUNT          266 a          365 c          361 g          254 t
ORIGIN      
        1 gtggagggtc aacgcgatgt ccaagcaacg cagccggtac agtgcccagt tcaagtttca
       61 actggccttg gaagctgcga agggcttgaa gacgctcaac gagttggcca gcgagcacaa
      121 cgtgcacccc aatcagatca gcgagtggaa gcgccgcctg ctggagggag gcagcacgat
      181 tttcagccgc gatggtgctc actcccaacg cgagcaccaa gaacgggagg tggaactcta
      241 cgagcacatt ggccggctca aaatggaact ggagtggctg aaaaaaacag ctgcccgctt
      301 cggttgaggc taaacgggcg atgatcgacc tgggggctct ccccatcagc attcgccggc
      361 cgtgtgagtt ggtcgggttg aaccgctcca cgttctatca cgcacctgca acagcgtccg
      421 ccttcaccct ccggctgatg cgcctgattg acgagcagta caccaagacg cccttttacg
      481 gctggccgcg gatgacagcg tacttgcgac ggctgggcct gccggttaac cacaaacgcg
      541 tccagcgttt gatgcgggtc atggggctgc aggccattta ccccaaaccg cgtagcagca
      601 ctgtggccaa agagcacaag atctacccgt atctactggg cgcggtcgcg acgtgccgcc
      661 ccaaccaggt ctggagtgcg gatatcacgt atgtccgtct ggccacgggc ttcatgtatc
      721 tggtggctat catcgactgg tggagtcggt atgtgctggc ctggcagctg tccaatacgc
      781 tggatgttgc cttctgccta gaagcgctcg agagggcgtt ggtgcaaggc tgccccgaga
      841 tgttcaacac cgatcaaggc gtccagttca ccagtctcgc cttcaccagc cgcctggagc
      901 gggcggggat cgccatcagc atggatggtc ggggccgcgc cctggacaat atctttgtcg
      961 aacggctatg gaggacggtc aagtatgaag acatttacct gaacgactat gtcagtattc
     1021 cggcgctggc agtcggcctc gaccgctact tcatgttcta taaccatgaa cggcctcatc
     1081 aaagcttgac ctatcggaca ccagcagagg cccatgggaa gcggtagcga cgtcgtacca
     1141 cccatccacc ttatttttac ccactcgtgg tctcgacaat ggggtcaact tccagttgtg
     1201 gccaaaaact cctttatttt caagcacttt catggatact cggccg
//
LOCUS       DASQSL010000540         1884 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_84602, whole genome shotgun sequence.
ACCESSION   DASQSL010000540 DASQSL010000000
VERSION     DASQSL010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1884
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84602"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..187)
                     /locus_tag="VE844_05465"
     CDS             complement(<1..187)
                     /locus_tag="VE844_05465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00815.1"
                     /translation="MQLGIKQNDQAPFCLLTNPPIDPWEIGNALFGRLTQGLKAGLIA
                     VDWTQVGDFMILEATLVV"
     gene            complement(189..695)
                     /locus_tag="VE844_05470"
     CDS             complement(189..695)
                     /locus_tag="VE844_05470"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00816.1"
                     /translation="MAQDEGRFGRIDYPRRWWAPKPIRPTVPRQVVREFGYVFAAVGA
                     QWGRLTALILPTANTEMMSLFLAQVAQEFSDFFIVMLVDRAGGHTAQRVIVPENIRLL
                     PQPARRPELNPTEPIWEELREKTLPNQSFPSLDALENTLCAGLTQLAADPNRVRSLTD
                     FPYMRVTF"
     gene            complement(698..967)
                     /locus_tag="VE844_05475"
     CDS             complement(698..967)
                     /locus_tag="VE844_05475"
                     /inference="COORDINATES: protein motif:HMM:NF024980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HZC00817.1"
                     /translation="MVEQFLKQSEVGQVSTGLQIKAALETVVGHQVAKTTVYRVLRRH
                     QWRKVVPRPRHPQASAAEQEAFKKTSPSRSRLSSKSETRGTRARL"
     gene            complement(1691..>1884)
                     /locus_tag="VE844_05480"
     CDS             complement(1691..>1884)
                     /locus_tag="VE844_05480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00818.1"
                     /translation="DERIKQCTAPWRIRRWQVIRCALVNPKPAAEIALEVGLARQTVH
                     NLGRVAQGDRTPRLSRNGT"
BASE COUNT          411 a          511 c          586 g          376 t
ORIGIN      
        1 ccaccaccag agtggcttcc aagatcataa aatcgccgac ctgggtccaa tcaaccgcaa
       61 tcagccccgc tttgagtccc tgggttaaac ggccgaataa ggcgtttcca atctcccaag
      121 ggtcaatagg gggattggtg agcaaacaaa acggggcctg gtcattctgc tttataccaa
      181 gttgcatttt aaaaagtaac tctcatatag gggaagtcgg tcagggaacg gacgcggttg
      241 ggatcagcag cgagttgggt gaggcctgcg cagagcgtgt tctccagagc atcaagggaa
      301 gggaaagact ggttgggcag ggtcttctcc cgcagttctt cccagatagg ctcggttgga
      361 ttgagttccg gcctgcgggc aggttggggc agtaagcgaa tgttctcggg cacgattacc
      421 cgctgggcag tatgcccgcc cgcgcggtcc acgagcatga cgatgaagaa atccgagaat
      481 tcttgggcta cctgagcgag gaacaagctc atcatctcgg tattggccgt tggcaggatc
      541 aaggcggtca ggcgccccca ctgcgcaccc accgcggcaa acacgtagcc aaactcccgc
      601 acgacttggc ggggcacggt gggccggata ggcttgggtg cccaccaccg ccggggataa
      661 tcgatccgtc caaagcgccc ttcatcctgg gccatgatca taaccgggcg cgtgtcccgc
      721 gggtctcgct cttggaggag agcctcgacc tgctggggga agttttttta aacgcctctt
      781 gctcggccgc actggcctgc gggtggcgcg gtcgcggtac caccttgcgc cactgatggc
      841 gcctgaggac ccgatacacg gtggtcttag cgacctgatg gccaacgact gtctccaaag
      901 ctgctttgat ctggagtccc gtgctcacct ggcccacctc actctgcttc agaaattgct
      961 ctaccacagc ccgctcctgt tccaggctga ggtaggcatg ttgccgttgc cctctacccg
     1021 gagtctccag cgcactgggc ccgtggcgat tgtaggccgc cagtgtgtca cgaatgcgtg
     1081 aagatggctt tggctatctg aacgcaatgc tgtacgagag atgagggaaa ggcccctcgg
     1141 agccggcttg caggagcagg cttcaaacca ccctaagctg catgggccaa aagtccgtgt
     1201 ggtgagcgtt aggggaggcg caacatgatt gcgtcaggta tggattaagg agacgagcgc
     1261 aagcgaacca tcggtgaggt gtcgaaagca atcaaatgtc gtcaaaaccg aagactagcg
     1321 gtgctccagg ataagctcag aagaagacct gtttactgtc tgagcggcga ccggcataga
     1381 gatggcgtga ccttaatcta ggctcttgta gggaacgtga gaacctgtcg tcccgatgtt
     1441 aagggagaaa cgcaagtggt agccccacga gcgtgagagt accgatgcgg ggcacagggg
     1501 cggagtcgcc cgtaatagtg aggaaagtcc ggtaatggga ctggagcgaa ggggcggcat
     1561 tgtccagctt taaacgatag aacaaccagt aaggggaggg ttctgttgag taaagcaaag
     1621 ccgttcagcc ccctgggctg ttgcccgtcc aggcgcggct ggacaatagg agcggtatga
     1681 atcgcgaggt tcacgtaccg ttgcgtgaga gcctgggggt gcgatccccc tgggctactc
     1741 gacctaaatt gtgcaccgtt tgtcgtgcta accctacctc cagtgcgatt tctgcagccg
     1801 gcttaggatt gactagcgca cagcgaatca cctgccagcg ccggatacgc cagggcgctg
     1861 tacactgctt gatccgctca tcaa
//
LOCUS       DASQSL010000541         2445 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_141477, whole genome shotgun sequence.
ACCESSION   DASQSL010000541 DASQSL010000000
VERSION     DASQSL010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2445
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141477"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..874)
                     /locus_tag="VE844_05485"
     CDS             complement(<1..874)
                     /locus_tag="VE844_05485"
                     /inference="COORDINATES: protein motif:HMM:NF014066.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraB/GumN family protein"
                     /protein_id="HZC00819.1"
                     /translation="MYIIAFLVQGTALAVPAMDCRPLPAGVSQQTPKPRYGQGLLFKL
                     SRPGSQPSHVFGTIHLSDERLVTLPLEVARVLDASRSFTMEAVLDERAIIELSDHLFY
                     QDGTRLSDQLGAALFQRVARLLARQGIPELMAQTVKPWGAYVILSMPPSQQGLPMDMV
                     LMQRAQTRGASVYGLETVREQAETLGNMALTDQVALLKDVVCHYEAAQQLIAEMTSRY
                     LKRDLAGLMVLANRFKLGEEYTEFMDRLLFQRNRRMVKRMAARLAEGNAFIAIGALHL
                     PGDQGVLALLEQQGY"
     gene            complement(1026..1577)
                     /locus_tag="VE844_05490"
     CDS             complement(1026..1577)
                     /locus_tag="VE844_05490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005545650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZC00820.1"
                     /translation="MAANFWQGQKVRLRSIAPEDWAIFYDWNTDTEVAQYSSAVPFPT
                     STEAFKKWAAEAAMAGPKNDTFRWVIENLDGGLVGTIHTHNCIARWGTFQYGVAIQRE
                     HWRKGYAAEAILLVLGYYFRELRYQKATVDIYAFNEASLRLHERLGFKHEGRLRRMIY
                     TDGVYHDKLILGMTAEEFEGSQK"
     gene            complement(1610..>2445)
                     /locus_tag="VE844_05495"
     CDS             complement(1610..>2445)
                     /locus_tag="VE844_05495"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HZC00821.1"
                     /translation="QQAQNDFILASDLLATLIEYSDKAVRSNIYLPVGYAAWLDQPLE
                     FDAKQALAVAKEHQPALQLSRVDYESSELLKRGAAVEARPDVNITATIESIQDGSVYG
                     YKSYWESIGAIGDPDTLNQSYAITYNYPWGNRALRARYAQAKHRVEDSVLNKRETYNT
                     VAQGLNDALSGIQTARARIMRAEQNLNAARLAYNSLANRAAEGEINEFEVIINIQQLL
                     NAKRAKIAAIVDNKRAEANLLASQGLIARHYAGIIAPTALERHRLNILSKREDLQYFL
                     R"
BASE COUNT          500 a          710 c          685 g          550 t
ORIGIN      
        1 catagccctg ctgctccaac aatgcgagca cgccctgatc gccaggcaga tgcaaggcgc
       61 cgatggcgat aaaggcattg ccctcggcaa ggcgcgccgc catgcgcttg accatgcgcc
      121 ggttgcgttg gaacagcagc ctgtccatga actcggtata ctcctcaccc agcttaaagc
      181 gattggcaag caccatcagc ccggctaaat cacgtttgag atagcggctg gtcatctcag
      241 cgatcagctg ctgcgcagcc tcgtagtggc acaccacgtc tttaagcaac gccacctgat
      301 cggtcagcgc catattaccg agtgtctcgg cctgttctcg aaccgtctct aacccatata
      361 cgctggcgcc ccgggtttgc gcacgctgca tcaacaccat atccatgggc aggccctgtt
      421 gagagggcgg catgctgagt atcacatacg ccccccaggg cttgacggtc tgggccatca
      481 gctcgggtat cccttggcgg gccaagagac gtgcaacccg ctgaaacaag gctgctccca
      541 gttgatccga gagacgggtg ccatcctgat aaaacagatg gtcggataac tcgatgatcg
      601 cccgttcatc cagcacggcc tccatggtaa agctcctgct ggcatcgagc acgcgagcca
      661 cttccaaggg caaggtcacc aggcgttcat cgctcaagtg aatggtgccg aatacgtgac
      721 tgggctgaga tcccggccgg gacagcttaa acagcaagcc ctgtccataa cgcggcttgg
      781 gagtttgttg agaaacaccg gccggcagcg gtctacaatc catcgctggg acagcaaggg
      841 ctgtcccttg gactaagaag gcgatgatat acaaaaagat tctttttatg cgtgtcatag
      901 gtatatttgc aaggggtgtg tttccgcgcg gcgcacaaaa cgaagcgggt ccaggctgat
      961 atgataacgt atcctccaga attcgctacg ctccctccgg gctactagct tttcttattt
     1021 ttagcttatt tttgggatcc ttcgaactcc tccgccgtca tgcccaatat caatttatcg
     1081 tgataaaccc catcggtata tatcatccgg cgcagccggc cttcgtgctt gaaaccgagc
     1141 cgctcgtgaa gccttaagga ggcttcgtta aaggcgtaga tgtcgaccgt cgccttttga
     1201 tagcgcagtt cgcggaagta atagcctaat accaaaagta tggcctcagc cgcatagcct
     1261 ttgcgccaat gttcccgttg aatagccacg ccgtactgaa atgtccccca gcgggctata
     1321 cagttatggg tgtggatcgt ccctacaagc ccgccatcga ggttttcgat gacccagcgg
     1381 aaggtatcat tcttgggtcc ggccatggcg gcctccgccg cccatttctt gaatgcctcg
     1441 gtggaggtgg gaaaaggaac cgcggaggaa tactgggcca cctcggtatc ggtgttccag
     1501 tcgtaaaata tggcccagtc ttcgggcgcg atgctgcgca gacgcacctt ttgcccttgc
     1561 cagaagttag ccgccatagt gttcagtcct ccctctgcat ggccaacgcc tagcgcagga
     1621 aatactgcag atcctcgcgc ttggagagta tgttcagacg atggcgttca agggccgttg
     1681 gggcaattat acccgcatag tgccgggcga tcaggccttg ggatgcgagc agatttgctt
     1741 ctgcccgttt gttgtcgacg atcgcggcga tcttggcgcg cttggcattg agcagttgct
     1801 ggatgttgat gatcacctcg aactcattga tctcgccctc tgccgctcgg ttcgcgaggc
     1861 tattgtaggc caagcgcgcg gcattgaggt tctgctcggc acgcatgatc cgcgcccgcg
     1921 ccgtctggat accgcttaag gcatcgttga gcccctgcgc taccgtgtta taggtctcgc
     1981 gtttgttaag cacactgtcc tccacccggt gcttggcctg ggcatagcgc gcccgcaagg
     2041 cccggttacc ccacgggtag ttgtaggtga tggcatagga ctgattgagt gtatcggggt
     2101 cgccaatcgc accgatcgat tcccaatatg atttatagcc gtacaccgag ccatcctgga
     2161 tcgactcgat agtggcggta atatttacgt ctggtctggc ctcgaccgcc gcgccgcgct
     2221 ttaggagctc gctcgattca taatcgacgc ggctcagctg cagcgccggc tggtgctcct
     2281 tggccaccgc aagggcctgt ttggcgtcga actcgagcgg ctgatcgagc caggcggcat
     2341 agcccaccgg cagatagata ttactgcgca ccgccttatc ggagtattcg atcaaggtcg
     2401 cgagaagatc cgaagcgagg ataaagtcgt tttgcgcctg ctgct
//
LOCUS       DASQSL010000542         1175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_29798, whole genome shotgun sequence.
ACCESSION   DASQSL010000542 DASQSL010000000
VERSION     DASQSL010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1175
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29798"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            378..>1175
                     /locus_tag="VE844_05500"
     CDS             378..>1175
                     /locus_tag="VE844_05500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012586206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00822.1"
                     /translation="MWNPHKKRSEVRIVHNCGRAEDPQTAERLRNLARSILKKCDPEA
                     IVQHSDQWRLIDAWPYGALYGLEALWKRLGIADIIADQLRSREFDFAVERALFAMVAN
                     RACAPCSKLYCYEQWLREDVRIEGTDTLALHHLYRAMDMLEAHKEGIEQALYFRLADL
                     LHLDVELIFYDTTSLQFEIDEVDQGESEEDWVEGSIAAGSKVYQAPRKRGLSKNGRSD
                     APQIVIGLAVTRDGLPVRHWVFPGNTVDVTTVSQVKDDLKGWKLSRCV"
BASE COUNT          269 a          317 c          321 g          268 t
ORIGIN      
        1 gaatccattt acgagcgcat ttggtcctac gggtgtaacg aacatgtcat ctccctgccg
       61 gacaaaggaa ttgccatctt cagcgagacg aacaccaaca acacaatgtc ttgttgaggc
      121 tattggctgt ttgtagcccg actttgacac ctgcaagtac atttgagcca gtacgcccga
      181 atcgccctga ttgaattggt tgggattatc cggatcgaca tagatacatc acgctaaaat
      241 cctagataca tgtattttca gatttggctt gacattaagc attacaattc tttatcctta
      301 cgtacatgta cttgcgtgaa acccgtcaaa aacgagctga tggctccttc gtcactcatc
      361 ttcagctggc cgagagcgtg tggaatccgc acaaaaagcg ctccgaggtc cgcattgtcc
      421 acaattgcgg acgcgctgag gatccccaaa cagccgagcg cctgagaaac ctcgctcgca
      481 gtatcctcaa aaaatgtgat cccgaagcga ttgtgcagca ctctgatcag tggcgcttga
      541 tcgatgcctg gccctacggg gccctgtatg gcttggaagc gctctggaag cgactgggca
      601 tcgccgacat catcgcggac caactccgca gccgcgaatt cgatttcgct gtcgaacgcg
      661 ccctctttgc catggtggcc aaccgagcct gtgccccttg ctccaagctc tattgttacg
      721 aacagtggct gcgagaggac gtccgcattg agggcaccga taccctggct ctgcatcatc
      781 tctatcgcgc catggatatg ctcgaagccc ataaagaagg gattgagcaa gccctctatt
      841 tccgtctggc ggatttgctc catctcgatg tcgagctcat cttctacgat acgacctcct
      901 tacagtttga aatcgacgag gtggatcagg gcgagagcga agaggattgg gtggaaggga
      961 gcatcgccgc ggggtcgaaa gtctaccagg cgccacgtaa gcgcggcctg tcgaaaaatg
     1021 gtcgctctga tgcgccgcaa atcgtcatcg ggctggcggt gacgcgagat ggcttgccgg
     1081 tgcgccactg ggtgtttccg ggtaatacgg tggatgtcac gaccgtgagc caagtcaagg
     1141 acgatctcaa ggggtggaag ctgagtcggt gcgtg
//
LOCUS       DASQSL010000543         1335 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_181803, whole genome shotgun sequence.
ACCESSION   DASQSL010000543 DASQSL010000000
VERSION     DASQSL010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1335
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181803"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1199)
                     /locus_tag="VE844_05505"
     CDS             complement(<1..1199)
                     /locus_tag="VE844_05505"
                     /inference="COORDINATES: protein motif:HMM:NF037653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar diacid recognition domain-containing
                     protein"
                     /protein_id="HZC00823.1"
                     /translation="MINLEVAQEIANKTTEIIGFNVLITDDAGIVIGSGDQGRVGTFH
                     EASVEVVKRGVMAWHDVAAAERLEGVKPGVTVPVVLENRTVGTVGITGNPDEVKRFGM
                     VVKSQTEIMLREALHLRMALLQERALESLLQDIANYDQEIVEPAVLVARGEELGYDLT
                     LSRVAVVVDLARFARIADSHRYRTSDGRPELELQSLKMGVLRTIKEVFSSDQDLAASI
                     GTGRYGLLHCVWSAEDDAAALHQTRTLCCSLEESVKTRHDIDVNIGIGTLASSISGLK
                     MSYHDAWGALQLGKRLARDRHVFQASEFRVQDLLLTASYSSRERFLQALLHPMKNEAD
                     WEDLRRTILAWCESGYNLVSASRNMHIHKNTLLYRLSKIERISGQSLRENYRHAFAVY
                     LACLLDEL"
BASE COUNT          269 a          403 c          346 g          317 t
ORIGIN      
        1 agctcgtcca acagacatgc cagatagacg gcgaaggcgt gcctgtagtt ttctcttagg
       61 ctttgaccgc tgatcctctc tatcttgctc aagcggtaga gcagcgtgtt cttgtggatg
      121 tgcatgtttc tcgatgcaga gaccaagtta taacccgatt cgcaccaagc caggatggtc
      181 cgccgcaggt cttcccaatc ggcttcgttc ttcatcggat gtaggagcgc ctgtaaaaac
      241 ctctctcgac tactgtagct cgcggtcagg agcagatcct ggacgcggaa ctcactggcc
      301 tggaatacat ggcggtctct agctagccgc ttgccgagct gcagagctcc ccaggcatca
      361 tggtatgaca tcttcagccc ggagatcgag ctagcgagcg tgcctatacc gatgttgacg
      421 tctatgtcgt gtcgggtctt gacgctctcc tcaagagagc agcacagggt acgcgtctga
      481 tgcaatgcag ccgcgtcgtc ttcggcggac catacacagt gcagcagccc gtatcttcct
      541 gttccgatcg aagcggccaa gtcctggtcg ctggagaaaa cctccttgat agtcctgagt
      601 actcccatct tcagggactg cagctcgagc tcgggtctgc catcgctcgt gcggtacctg
      661 tgggagtccg cgatgcgagc aaaccttgct aggtccacaa ccactgctac tcggctcagg
      721 gttaagtcgt agcccaactc ttctccccga gccacgagca ccgccggctc cacgatctcc
      781 tgatcgtagt tggcgatgtc ctgtaacagg ctctccagag ctctctcctg taacagcgcc
      841 attctcagat gtagcgcctc tcgcagcatg atctcggtct ggctcttgac aaccatcccg
      901 aagcgcttga cctcgtcggg gttgccggtg atcccaaccg tcccgaccgt tctattctcc
      961 aataccacag gcaccgtgac ccccggcttg acaccctcta gcctttcggc ggcggcaacg
     1021 tcgtgccaag ccatgacccc tcgcttaaca acctcaaccg aggcttcatg gaaggtcccg
     1081 accctgcctt gatcgccgct gccaatgacg atgccggcat cgtccgtgat gaggacgttg
     1141 aatccgatga tctcggtcgt cttgttcgcg atctcctggg caacctcgag atttatcatg
     1201 gtcaaaacct cctcgcagac ctttattgta cttatagtac aaaatcacgg tgatggaagc
     1261 ccttattttt gtgggtagtc actaatgaga gatgcaacat ttgcggctag attgtatgca
     1321 gcgatggtgg caaga
//
LOCUS       DASQSL010000544         1574 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_4653, whole genome shotgun sequence.
ACCESSION   DASQSL010000544 DASQSL010000000
VERSION     DASQSL010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1574
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4653"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            109..1374
                     /locus_tag="VE844_05510"
     CDS             109..1374
                     /locus_tag="VE844_05510"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00824.1"
                     /translation="MESLPPALLDFISMFRPLLRTEVFDSFTYLLCGLLIGEAKHGTV
                     RASVFAPAHYQPQRLSDLFCCHKLSRQALMAQLTQGVLTTLYGGGLPTRLFWLADSTL
                     TERPFVRRVASVGLFHRAKRVIGRAKHLQGQCYVFAAHLYQTAQKHWASALVGALLYV
                     KGRSIPRLVGDLAQQLRLPAEVRQVWVVDRGIVSRPLVQSLERLDQYVLGRVRSNQVF
                     YFAPRRQPRRGRRRSYGQKCRVDKLIKRFPERLHHQTALLKVRGKARTVRIYDAEMLW
                     RGVWHDRPCPGHLIIVLVPGLRLKPWYLLTTDLELTPLEAVQAYGGRQQIEVNFDEVK
                     ELGLGQYQGRSGEGVRRWPVFLCIAHALLKLLATQALHIELPSLNWSWYKQENTVGQV
                     RRRLIEACRPRISRTKASDPTAEKMKKAA"
BASE COUNT          319 a          464 c          454 g          337 t
ORIGIN      
        1 actgtagttc ccggtttttg agagataaat aagcggcgca gagagcttgc tctttgcgcc
       61 gcagtcgttc atcgttgaag cggtcaacca caacgggaga aacgactgat ggaaagctta
      121 ccaccggccc tgcttgattt catctcgatg ttccgccccc tgttgcggac agaagtcttt
      181 gacagtttta cctacttgct gtgcggtctg cttatcggcg aagccaagca cggcacggtc
      241 cgcgccagcg tctttgcgcc agcccattat cagccccaac gcttgtcgga tttgttctgc
      301 tgccacaagc tctcgcggca agcgctgatg gcccagttaa cccaaggggt cttgactacg
      361 ctctatgggg gtgggctacc cacccgcctc ttctggctag ccgactcgac cttaaccgag
      421 aggccgtttg tccggcgggt ggcttcggtg ggcctgttcc accgcgccaa gcgcgtcatc
      481 ggtcgggcca aacacctaca aggccagtgt tatgtctttg cagcgcacct ctaccagacg
      541 gcccagaagc actgggccag tgcgctggtt ggcgccttgc tctacgtcaa agggcggtcc
      601 attccgcggt tggtcggtga tttagcccag cagttgcgct tacctgcaga ggtgcgtcag
      661 gtctgggtgg tcgatcgcgg catcgtcagt cgccccttgg tgcagtcctt agagcgctta
      721 gaccagtatg tgcttgggcg cgtgcgctca aaccaggtct tctacttcgc cccacgccgt
      781 caaccccgtc ggggccgccg ccggagctac ggccagaaat gccgggtaga taagttgatc
      841 aaacgctttc ccgagcgcct gcaccatcag accgccctcc tcaaggtacg tgggaaagcg
      901 cgcaccgtgc gtatttacga tgctgaaatg ctatggcggg gggtgtggca cgaccgcccc
      961 tgccccgggc acctgattat cgtgctcgtg ccagggctga ggttaaaacc ctggtatctg
     1021 ctcaccaccg atctggagct caccccgttg gaggccgtcc aggcctatgg cggacgccag
     1081 cagatcgaag tcaacttcga cgaggtcaaa gagttgggct tggggcagta tcaaggccgc
     1141 agtggcgaag gcgtacgccg ctggccggtc ttcttgtgca tcgctcatgc gctgttgaag
     1201 ttgctggcga cccaagcatt gcacatcgag ttgccctcgc tcaactggtc gtggtacaag
     1261 caggaaaaca cagtcggcca agtccgacga cgcttaattg aggcctgccg cccgcgcatt
     1321 tctcgcacta aggcgtcaga ccctaccgca gagaaaatga agaaagcggc ataatttcaa
     1381 caaattaatc ggcttaaaaa tcgggaacta cagctcatga ttacgggctt cagcgtagtc
     1441 gaagatccgg taagaacggc ctggagcggt tcaacgacca caacatcgga tggagcctgg
     1501 tcattcggca gactgatggc caatatggcg ggtccccata acccctcgga ttttgtccgg
     1561 aattggttaa aaaa
//
LOCUS       DASQSL010000545         1063 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_155393, whole genome shotgun sequence.
ACCESSION   DASQSL010000545 DASQSL010000000
VERSION     DASQSL010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155393"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..867)
                     /locus_tag="VE844_05515"
     CDS             complement(<1..867)
                     /locus_tag="VE844_05515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00825.1"
                     /translation="MGTATTQTRQDHTITVDFHDETTYFQLLGDGRAFVELVMAFILS
                     IGFQLKHKGFCRGGGCLTRHSHYVRVRLGGLTIWRIQCTRCKAVFTVLPHFVLRYRQM
                     RPEVARDALLATHGDLSLELCAVICHISPMALYRLVCALGQHSLVRVLTRCGLSLPTY
                     FLADEKHNHCLTEKVYLPTIVSGRVLWHLGYTEEASAAAFTKSYGVFQGAALQQESSY
                     RVRGVLTDGFDSTTKSLRTFFPRARLGNCLRHALTKLPKKLVAIAPPVRLALRTQFHT
                     LWYRARQRKGLRV"
BASE COUNT          239 a          298 c          330 g          196 t
ORIGIN      
        1 cacccgcagg cccttgcgct ggcgcgcccg gtaccacagc gtatggaact gtgtgcgtag
       61 tgccagacgg acaggcggcg cgatggccac gagtttcttc gggagcttgg tgagtgcgtg
      121 gcgcaggcag ttgcccaagc gcgctctagg gaagaacgtg cgcagactct tcgtggtgct
      181 gtcaaagcca tcggtgagca cccctcggac tcgataggac gactcctgct ggagcgccgc
      241 accttgaaac acgccgtagg acttagtaaa agccgcggca ctggcctcct cggtgtaccc
      301 cagatgccag aggacacggc cactcacgat cgtgggcaaa tagaccttct ctgtgaggca
      361 gtggttgtgc ttttcatccg cgaggaaata tgtgggcagg gacaggccac accgggtcag
      421 taccctgacc aaactgtgtt ggccgagtgc gcagacgagg cgatagagcg ccatcgggga
      481 aatatggcag atcacggcgc agagctccaa actcaggtca ccgtgtgtgg ccaacagggc
      541 atcgcgggcc acctccggtc gcatctggcg atagcgcaag acgaagtgcg gcagcacggt
      601 gaacaccgct ttgcacctcg tacattggat gcgccagatg gtgagaccac ccagccggac
      661 acggacataa tgggagtggc gggtcaggca cccgccgccg cgacagaacc ccttgtgttt
      721 caactgaaag ccgatagaga ggatgaaagc catcaccaat tcgacaaagg ctctgccgtc
      781 gccaagcagt tgaaagtagg tcgtttcatc atggaaatcg acggtgatag tgtggtcttg
      841 ccgcgtctgt gtggttgctg tgcccaatgt gtcaccccca gatcatcagg tgtcgtaagc
      901 tgatgagaca cactgggggt aacccgttga aatctcaaga ccatcgtgaa aggcgcagga
      961 cgtcaccacg taatccggtg gaatgtggaa actttcagac atccagggct gacgccggtg
     1021 attccacaag cgtgaagccg aacctcgcgg cttttttgcg caa
//
LOCUS       DASQSL010000546         1068 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_72956, whole genome shotgun sequence.
ACCESSION   DASQSL010000546 DASQSL010000000
VERSION     DASQSL010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72956"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            577..>1068
                     /locus_tag="VE844_05520"
     CDS             577..>1068
                     /locus_tag="VE844_05520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015253341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZC00826.1"
                     /translation="MDVIFTHGAGLDVHKKTVMACRVRPDPTGQQADGVMELQEFGTM
                     TADLLTLSDWLAEGGVTHVAMESTGEYWRPVYNLLEGNVTIFLVNAAHVKQVPGRKTD
                     KADARWLAKLMRYGLLQASFIPPVGQRDLRDLTRYRTKLVQERSREVNRVQGVLERAN
                     IKLA"
BASE COUNT          228 a          290 c          345 g          205 t
ORIGIN      
        1 tggacctgac gcgttacaaa gatttagtct caaaataccc ccttgacaac actatgagcc
       61 cctcgctgag cagtcccgaa accctccggt tttgaaaacc cgccgttgag ctgtctcata
      121 aaaccctggg atactgttgg cgaactcggg agggttgaaa attgcgtctc gcgtatgact
      181 tctttgaagg gccaagacta tggagatacc tatgcagaaa ggctggctta tgagggtaga
      241 aataggttcg ccaacagtag cccatgaact ggtaatcacc accgcgtatg aaaagggctt
      301 cgctattttc agcagagttg tcatgccccg cggggcacca agagccatga aaatggttat
      361 gtgctccccc cgctcgacgc acggggtaga atgtgcgcat ctgggctggc cgtgaggtcg
      421 tttcgatgtt ggtgccgcgc gcctgcagca gagttggacc cggatacccc caggcaccaa
      481 ggaatgtcgc cagcttcccc gcggaagcgg agcacgcaag atagcatcgt gatgtcgggg
      541 tgtcccgcca gcctgtccag cttctggagg tggctcatgg acgtgatctt cacccatggt
      601 gcggggctgg atgtgcacaa aaagacggtg atggcgtgcc gcgtgaggcc cgatccgaca
      661 ggccagcagg cggacggcgt catggagctg caggagtttg ggaccatgac agcagacctg
      721 ctgacgttgt ccgactggct ggccgagggc ggggtcaccc atgtcgcgat ggagagcacc
      781 ggcgagtact ggcgccccgt gtataacctc ttggaaggca acgtcaccat cttcttggtg
      841 aacgcggccc atgtgaagca agtgcccggg cgtaagacgg acaaggcgga tgctcggtgg
      901 ctggcgaaac tgatgcgcta tggcctgctg caggccagct ttatcccacc ggtagggcag
      961 cgcgacctcc gggacttgac gcggtatcgc accaagctgg tgcaggaacg tagccgcgag
     1021 gtgaaccggg tgcagggggt gttggagcgg gcgaacatca agctggcc
//
LOCUS       DASQSL010000547         1376 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_194357, whole genome shotgun sequence.
ACCESSION   DASQSL010000547 DASQSL010000000
VERSION     DASQSL010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1376
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194357"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(71..146)
                     /locus_tag="VE844_05525"
     tRNA            complement(71..146)
                     /locus_tag="VE844_05525"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(111..113),aa:Arg,seq:cct)
     gene            complement(197..1213)
                     /gene="dusA"
                     /locus_tag="VE844_05530"
     CDS             complement(197..1213)
                     /gene="dusA"
                     /locus_tag="VE844_05530"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012638415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002943 - tRNA dihydrouridine synthesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HZC00827.1"
                     /translation="MARHSKTSRTPCDPLKHWDRRVSIAPMMDWTDRHCRYFLRLISR
                     HILLYTEMVPTGALIYGDRDRFLAHDPAEHPLALQLGGSDPQELARCARMAETYGFDE
                     INLNVGCPSDNVQRGRFGACLMAEPELVACCLEAMNQAVSLPITVKTRLGIDHRDSYE
                     DLCNFISRVMAAGCKTFILHARKAWLKGLSPKENREIPPLRHEVVHQLKDDFPRLEII
                     INGGFTSLTQVEQQLQHVDGVMIGRAAYHNPYLLAAVDQRFYGDPRPSPSRAEILRQF
                     TLYVRQELSRGTALHHMTRHVLGLFQGQPGARRWRKHLSEQIHRTGIGFEALEQVAEQ
                     LTCA"
BASE COUNT          311 a          368 c          380 g          317 t
ORIGIN      
        1 catgactgta ttgcctatgt catctcccga ttgtccccgg aaggttttcg aggcaagcgg
       61 ctgattttat tggtgccctg gacaggaatc gaacctgtga ccttccgctt aggaggcgga
      121 cgctctatcc cctgagctac cagggcaagg tggtgggatg gttttcacac accctaaaac
      181 ctacctcact tggcgctcac gcgcaagtaa gctgttcggc gacttgttca agggcttcaa
      241 atcctatgcc ggtccgatgg atctgttcac ttaagtgttt ccgccaacgg cgcgcaccgg
      301 gctggccctg aaataacccc agcacatgcc gggtcatatg gtgcaaggct gtacctcttg
      361 atagttcttg tctaacgtac agggtaaact gccgcaggat ttcggcgcgg ctcggggagg
      421 gcctaggatc gccatagaaa cgctggtcga ccgctgccaa gaggtaggga ttgtgatagg
      481 ctgcacgccc gatcatgacg ccatcgacat gctggagctg ctgttccacc tgagtgaggc
      541 tggtaaaacc cccattaata atgatctcca ggcgcggaaa gtcatctttg agttggtgca
      601 ccacctcatg acgaaggggt gggatctcgc gattttcttt ggggcttaaa cccttaagcc
      661 aggccttgcg ggcatggaga ataaaggtct tacatccggc tgccatcacc cggctaataa
      721 aattgcagag atcttcatac gaatcccgat ggtcaatacc aagccgggtc ttgaccgtga
      781 ttggaaggct tacggcctgg ttcatcgcct ccagacaaca tgccacaagc tcgggttcgg
      841 ccataagaca agcgccaaag cggccacgct gcacgttatc gctcggacag ccgacattca
      901 ggttaatctc atcgaaacca taggtctccg ccatacgggc acaccgggcg agttcctgcg
      961 gatcgctgcc gcctagctgc aaggccaggg ggtgttcagc agggtcgtgg gccaggaatc
     1021 gatcgcgatc gccgtagatt agggcgcccg ttggcaccat ctcggtatag agcaggatat
     1081 gccgggagat cagccgcaga aagtagcggc agtgccgatc ggtccaatcc atcatggggg
     1141 cgatggaaac gcgccgatcc cagtgtttta atggatcaca cggagttcga gatgttttac
     1201 tatggcgggc cattactatt accatattat ctacaatgac caagatgaga tggttaggtg
     1261 ctgccctgat tgccacttat atgattgcgt tattcgcact cgatttaggc gactacctta
     1321 cgcttgagta cttgcaatca cagcacgcac atatcgaggc ttattatacg gcgcat
//
LOCUS       DASQSL010000548         2807 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_4680, whole genome shotgun sequence.
ACCESSION   DASQSL010000548 DASQSL010000000
VERSION     DASQSL010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2807
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4680"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..293)
                     /locus_tag="VE844_05535"
     CDS             complement(<1..293)
                     /locus_tag="VE844_05535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00828.1"
                     /translation="MKPLGVDDLLDTLIAELREQGRHLRELNLHVSSLGSCMGHGLEQ
                     VVKESVEEFAGQAFSHAERLVLRDETEVHTGLAIFAQRLEKVEIRGRRGRDSSR"
     gene            complement(368..>2807)
                     /gene="metH"
                     /locus_tag="VE844_05540"
     CDS             complement(368..>2807)
                     /gene="metH"
                     /locus_tag="VE844_05540"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020683780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HZC00829.1"
                     /translation="IAAEPDITRVPVMIDSSKWSVIERGLRCLQGKGVVNSISLKEGE
                     ERFIEHAKLVRRYGAAVIVMAFDERGQADTTERKFEICKRSYAILTDKVGFPPEDIIF
                     DPNILTVATGIEEHNDYALAYFEATRAIKHHLPYALVSGGVSNVSFSFRGNNVVREAI
                     HAAFLYHGIQAGMDMGIVNAGQLGIYQEIPTDLLERIEDVLFNHRLEATERLVEFAET
                     VKGEGAKAKQEDLAWRNAPVQERLSHALVKGITDYIEEDTEEARRQYERPLQVIEGPL
                     MDGMNVVGDLFGSGKMFLPQVVKSARVMKKSVAYLVPFIEREKQAGGSYRSQGKIVMA
                     TVKGDVHDIGKNIVGVVLQCNNFEVIDLGVMVTCETILETARKENAHLIGLSGLITPS
                     LDEMVNVAKEMERQDFTLPLLIGGATTSRTHTAVKIAPAYSCFTVHVKDASRAVGVAQ
                     SLVSADLKADFVARIRAEYEGVRERHKSRQTRTDWLSLHQARDNRFPIEWSRYTSPVP
                     KRLGIQVWRDYPLEELCHFIDWTPFFVAWELAGRFPRILEDPVVGTEARKLYRDALDL
                     LDQLIAEKWLTARAVIGLFPANTVGEDDIEIYTDDNRHGELLVIHTLRQQQKKPDGQP
                     NFALADFIAPKESGVADYIGAFAVTAGIGIEAVVERFEKDHDDYNAIMIKALADRLAE
                     ALAECLHERVRKEFWGYTPEENFDNAALIDERYQGIRPAPGYPACPDHTEKLLLWKLL
                     EAEEHSGIRLTESLAMYPAASVSGWYFSHPEARYFGLGKINEDQVHDYAKRKGMDVKA
                     VERWLAPNLGYEVE"
BASE COUNT          577 a          873 c          755 g          602 t
ORIGIN      
        1 cggcttgaat cgcggcccct tcttcccctt atttccacct tttcgaggcg ttgggcaaaa
       61 atagccaacc cggtatgcac ttcggtttca tcccgcagca ccaaccgctc ggcgtgagag
      121 aacgcttgtc cggcaaattc ctccacgctc tccttgacca cctgctccaa accatgcccc
      181 atgcagctgc ctaaggaaga gacatgcagg ttcaactccc gcaaatggcg cccctgctcc
      241 cgcaactcgg caataagcgt atcaaggaga tcgtccacgc ctaatggttt caatcgtctc
      301 ggtgctcgtg ttgttcatag gttgcatctc taaaacttga gggtctttgt cgtcaacaga
      361 acagggacta ctcgacttca taccccagat tcggcgccag ccaccgttcc acagccttca
      421 catccatccc tttacgcttg gcataatcgt ggacctggtc ctcattgatc ttgcctaggc
      481 caaaatagcg cgcctcgggg tgggaaaaat accagccgct gaccgaggcc gccgggtaca
      541 tcgccaggct ttcggtcaga cggatgccgg aatgctcctc agcctcgagc agcttccata
      601 gcaagagctt ctcggtatga tccgggcagg cgggataacc gggcgccggg cggatccctt
      661 gatacctctc gtcgatcaag gccgcattat caaagttttc ctccggtgtg tagccccaaa
      721 attccttgcg cacacgttcg tgtaagcatt cggccaaggc ctcggccagc cgatcagcta
      781 aggccttgat catgatggcg ttgtagtcgt cgtgatcctt ctcgaagcgt tccaccacgg
      841 cctcgatgcc aatgcctgcg gtaacggcaa aggcaccgat gtaatccgct acacccgact
      901 ctttgggcgc aatgaaatcg gccagggcaa aattcggctg gccgtccggc ttcttttgct
      961 gctggcgcag ggtatggatg accagcaact caccatggcg gttgtcatcg gtatagatct
     1021 cgatatcatc ttcgcccacc gtgttcgccg ggaagaggcc gatcaccgca cgcgcggtaa
     1081 gccatttctc cgcaatcaac tgatcgagca gatcgagcgc atcacggtag agcttacgcg
     1141 cctctgtgcc aacgaccgga tcctcgagga tacgcgggaa tcgcccggca agctcccagg
     1201 cgacgaaaaa cggtgtccag tcgataaaat ggcacagttc ttcgagtgga tagtcccgcc
     1261 agacctggat acccaaccgc ttcggcacgg gcgatgtata gcggctccac tcgatcggga
     1321 accgattgtc gcgggcttga tgcaggctca gccagtccgt gcgtgtctgc cggcttttgt
     1381 gccgttcgcg cacaccctcg tattcggccc tgatccgcgc cacaaaatcg gccttcaaat
     1441 cagcgctgac gagactctgg gccacaccga ccgcgcgcga ggcatccttc acatgcaccg
     1501 tgaagcacga gtaggccggt gctatcttga cggccgtatg ggtccgcgag gtcgtcgccc
     1561 cgccgattaa cagcggcagg gtaaagtcct ggcgctccat ctccttggcg acgttgacca
     1621 tctcatcgag cgaaggggtg atgaggccgg agagcccgat aagatgagcg ttttctttgc
     1681 gcgccgtctc gagaatggtc tcgcaagtta ccatgacccc gagatcaatg acctcgaagt
     1741 tattgcactg gagcacgaca ccgacgatgt tcttgccgat gtcgtgcacg tcgcccttga
     1801 cggtggccat cacgatcttg ccctggctgc gatagctacc gcccgcctgt ttctctcgct
     1861 cgatgaaggg gaccagatag gcgacagact ttttcatgac ccgcgcgctt ttgaccacct
     1921 gcggcaggaa catcttgccc gagccaaaca gatcgccgac cacattcatg ccgtccatga
     1981 gcggcccctc gataacctgg agcggccgct catactgccg gcgcgcctct tccgtatcct
     2041 cctcgatgta gtcggtgatg cccttgacca acgcatgact caagcgttcc tggaccggtg
     2101 cattgcgcca ggcgaggtct tcctgtttag ctttggcacc ttcacccttg accgtctcgg
     2161 cgaattcgac caggcgctcg gtcgcctcta gacggtgatt gaagagcaca tcttcaatgc
     2221 gctccaagag atccgtaggg atctcttggt agatgccgag ctggccggca ttgacgatgc
     2281 ccatgtccat gcctgcctga atgccatgat aaagaaaggc tgcatgtatg gcctcgcgca
     2341 cgacattatt gccgcgaaac gagaaggaga cattgctgac accaccagaa accagcgcat
     2401 acggcaggtg atgcttgatc gcacgggtcg cctcgaagta agccagggca tagtcgttgt
     2461 gctcctcgat gccggtcgcg accgtcagga tattgggatc aaagatgata tcctcgggcg
     2521 gaaaaccgac cttgtcggtg aggattgcgt aggaacgctt gcagatctcg aacttgcgct
     2581 cggtggtatc cgcttggccc cgctcgtcaa aagccatgac gatcaccgcc gcaccatagc
     2641 ggcgtacaag cttggcatgc tcgatgaatc tttcctcgcc ttccttgaga ctgatggaat
     2701 tgaccacgcc tttgccctgc aggcatctca aaccccgctc gatcacgctc cacttggagg
     2761 agtcgatcat caccggcacg cgcgtgatat caggctcggc agcgatg
//
LOCUS       DASQSL010000549         3190 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_155423, whole genome shotgun sequence.
ACCESSION   DASQSL010000549 DASQSL010000000
VERSION     DASQSL010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3190
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155423"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..350)
                     /locus_tag="VE844_05545"
     CDS             complement(<1..350)
                     /locus_tag="VE844_05545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_250223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZC00830.1"
                     /translation="MSYQVLARKWRPRRFEQMVGQTHVLRALINALDSKRLHHAYLFT
                     GTRGVGKTTVARIFAKALNCKRGISSNPCGECAACMEIDEGRFVDLIEVDAASRTKVD
                     ETRELLENVQYAPT"
     gene            complement(413..509)
                     /gene="ffs"
                     /locus_tag="VE844_05550"
     ncRNA           complement(413..509)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="VE844_05550"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            complement(543..633)
                     /locus_tag="VE844_05555"
     tRNA            complement(543..633)
                     /locus_tag="VE844_05555"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(597..599),aa:Ser,seq:gga)
     gene            820..2697
                     /gene="uvrC"
                     /locus_tag="VE844_05560"
     CDS             820..2697
                     /gene="uvrC"
                     /locus_tag="VE844_05560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018231780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HZC00831.1"
                     /translation="MPDPSSAHCTRDAGTALPFDGKAFCETLTNKCGVYRMFDKDGKV
                     LYVGKARHLKQRVLSYFGASAQSNPKIRALVAHIQAIEVTVTHTENEALILENNLIKE
                     LKPRYNIVLRDDKSYPYIYLSSDQEFPRLSFHRGARTGKGRYFGPYPSAGAVRDSLNL
                     LQKLFLIRSCEDSFFQNRTRPCLLYQIKRCTAPCVGFIDAPSYQDDVGHAVMFLEGRN
                     AEVIEHLVKRMEAAAAALEFERAARYRDQINHLKQIQQRQYISVGNRDLDVIACSARE
                     ERACVQVFFIRNGHNLGNKAFFLKNTQGSGVEDILSSFLSQYYLAVRTDRTIPAEILV
                     NHPVRDLGVLMEVFAQQSGRKIVIHSKVQGERARFLQMATENAEIALTQHLAGTKTQQ
                     QRLLALQTLLGLNHPIERMECFDISHTRGEATVAACVVFGPEGPITSDHRRFNIEGIE
                     PGDDYAAMHQAIGRRYSRMKREQGTFPDVLLIDGGLGQARQAREVLASLAITDMRIIG
                     VAKGPSRKPGLETLILSDQERSIRLPPDSPALHLIQQIRDEAHRFAITGHRQRRAKAR
                     TTSALEQIAGIGAKRRRQLIQHFGGLQGVAQAGIEDLRKVPGISKQLAIKIYTGFHDS
                     V"
     gene            2694..>3190
                     /gene="pgsA"
                     /locus_tag="VE844_05565"
     CDS             2694..>3190
                     /gene="pgsA"
                     /locus_tag="VE844_05565"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002684813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HZC00832.1"
                     /translation="MNIPNTLTLVRIALIPIFVIVFYLPIKWSHMATAVIFALAALTD
                     WLDGYLARRLGQTSALGAFLDPVADKLMVAVVLVFLLQQNPSPWLALPAAIIIGREIT
                     ISALREWMAELGVRARVAVSSLGKIKTTAQMVALITLLYREPIGGLPLYTVGFILLYV
                     AAVLTL"
BASE COUNT          658 a          936 c          906 g          690 t
ORIGIN      
        1 taagtagggg catattgtac gttttccaac agttcccggg tctcatcgac cttggtgcgc
       61 gaggcggcat cgacctcgat gaggtctacg aaccggccct cgtctatttc catgcaggca
      121 gcacattcgc cacacggatt agaactgatt ccgcgtttgc aattgagggc cttggcaaag
      181 atacgcgcta ccgtagtctt gcctacgcca cgggtgccgg tgaacagata ggcatggtgt
      241 aagcgcttgc tgtccagggc attgataagg gcgcgcagca catgggtctg gccgaccatc
      301 tgctcgaagc gccgtggtcg ccacttacgt gcgagcactt gataactcat accccacccc
      361 tgtaacccca tgccgctgtc tgccctcatt ctacccctaa aaaggaggcg gcccgcaccg
      421 atcacacccc agcgcccgct actattgcta ccgctgctcc cttccgggcc tgacggggtt
      481 cacaacttca cgtcgagggg ggacccgcac ggaccaccct tgaaaggtat cggccatctg
      541 tatggcggag agggtgggat tcgaacccac ggtacccttt tggagtacac agcatttcca
      601 gtgctgcacc ttcggccgct cggtcacctc tccagcttgg attaattctg ttggaccctg
      661 gcaaacaagg ttaaactaga atggggtatc gtgcaatcgg ttgcggtgaa tcaacccggg
      721 cagtggtcat tgaaggagcc tgcaggcgat tgcccggctg gcgccttgga tacgctttaa
      781 aatttgatcc caaggaggcg gaattgttac tctctgtata tgccagatcc ctcttcagct
      841 cattgtaccc gtgatgcagg gactgccctg ccgttcgatg gcaaggcgtt ctgtgagacg
      901 ctcaccaaca aatgcggcgt ttaccggatg ttcgataagg acggcaaggt cctgtatgta
      961 ggcaaggcgc gtcatctcaa acagcgggtg ctcagttatt tcggcgcctc ggcgcaatcg
     1021 aaccctaaga tccgcgcgct agtggcgcac attcaggcga ttgaggtgac ggtcacgcac
     1081 accgagaatg aggcgctgat cctggagaac aacctcatca aggagcttaa gcctcgctac
     1141 aacatcgttc tgcgggacga caagagttat ccctatatct atctctcaag cgatcaggaa
     1201 tttccgcgtc tgagttttca ccgcggcgcc cgcaccggca aagggcgata tttcggccct
     1261 tatccgagcg ccggcgcggt gcgggacagc ttaaatctct tgcagaaact atttctcatc
     1321 cgctcctgtg aagacagctt tttccaaaac cgcacccggc cctgtctgct ctatcagatc
     1381 aagcgttgca cagcgccttg cgtcggcttt atcgacgcgc cgtcctacca agacgacgtg
     1441 ggacatgcag tgatgttttt ggaaggcaga aatgcagagg tgattgaaca cctggtcaaa
     1501 cgcatggagg cagccgctgc cgccctggaa ttcgagcggg cggcccgcta tcgggatcag
     1561 atcaatcacc taaagcagat ccaacagcgc cagtacatca gcgtaggcaa ccgcgatctg
     1621 gatgtcatcg cctgtagtgc ccgtgaggag cgtgcctgcg tgcaggtctt ttttatccgc
     1681 aacggacata atctcggcaa caaggcattc ttcctaaaga atactcaagg cagtggagtc
     1741 gaggatattc tctcgagttt tctttcccag tattacctgg cagtgcggac cgaccgcacg
     1801 atcccggcgg agatcctggt gaatcatccg gtgcgcgacc tcggtgtgtt gatggaggtg
     1861 tttgcacaac agagcgggag aaagatcgtg atccactcca aggtccaggg cgaacgagcg
     1921 agatttttgc aaatggccac agaaaacgcc gagatcgcct tgacccagca ccttgccggt
     1981 accaagaccc agcagcagcg ccttctggcg ctccagacgc tcttgggtct caaccatccc
     2041 atcgaacgga tggagtgctt cgatatcagt cacacccggg gcgaggctac ggtggcggcg
     2101 tgtgtggtat tcgggccgga gggaccgatc acatcggatc accggcggtt taacatcgaa
     2161 gggattgagc cgggggacga ctacgcggcg atgcatcagg ccatcggccg ccgttacagc
     2221 cgcatgaaac gggagcaagg cacgttccct gacgtacttc tgatcgatgg cggcctgggg
     2281 caggcgaggc aagctcgcga ggtcttagcg tccttggcga tcacggatat gcgtatcatc
     2341 ggcgtcgcta agggaccttc ccgcaaaccc ggcttggaga ccttgatcct gtctgaccag
     2401 gaacggtcca tccgcttacc gccggattcg ccagcactgc acctgatcca acagatccgc
     2461 gatgaagccc atcgctttgc catcaccggt caccgccagc ggcgcgccaa ggctcgaact
     2521 acttccgcgc ttgagcagat cgcagggatt ggcgccaagc ggcgccgtca gctgatccag
     2581 cacttcggcg gactccaagg tgtagcccag gctggtatcg aggatctgcg caaggttcca
     2641 ggcatcagta aacaactggc tatcaagatc tatactgggt ttcacgacag cgtatgaata
     2701 tccctaatac gctgaccctg gtgcggatcg ccttgatccc gatctttgtg atcgtgtttt
     2761 atctccctat caagtggtcc catatggcca cggcggtgat ctttgccctg gcggcgctga
     2821 ccgattggct cgatgggtat ctcgcacgcc gcctgggcca aacctcggcg cttggggcat
     2881 tccttgatcc ggtggcggac aaactgatgg ttgccgtggt attggtgttt ttgctccagc
     2941 aaaacccgag cccctggctg gccttgccgg cagccattat catcggccgc gagatcacca
     3001 tctcggccct gcgcgaatgg atggcggaat tgggtgttcg cgccagggtg gctgtctcct
     3061 cgctcggcaa gatcaagacc accgcccaga tggtcgcctt gatcaccctg ttgtaccggg
     3121 aacccatcgg tggcctgccg ctctatacgg tagggtttat acttctgtat gtggccgcgg
     3181 tgcttaccct
//
LOCUS       DASQSL010000550         1569 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_84643, whole genome shotgun sequence.
ACCESSION   DASQSL010000550 DASQSL010000000
VERSION     DASQSL010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1569
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84643"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="VE844_05570"
     CDS             complement(<1..280)
                     /locus_tag="VE844_05570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006325129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HZC00833.1"
                     /translation="MDLPEIRHLIAFTTVLETGGFTKAAHALNLTQSALSHQIKTLEE
                     QLGVEVFARIGKRTVLTQAGEILLKHATVVLRELSDARQALLELRDPGR"
     gene            699..>1569
                     /locus_tag="VE844_05575"
     CDS             699..>1569
                     /locus_tag="VE844_05575"
                     /inference="COORDINATES: protein motif:HMM:NF013539.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HZC00834.1"
                     /translation="MIPLDDPRRPMYDEILKRPAFIRENLEALDGLVRATLPRDACRQ
                     WTRVLLTGCGDSFYAGLASELAFETWTALPVDVQPSLSGARYAIPAMATPAVVFSVSH
                     SGRVARTVETAALARSHGLDTVAVTGNPESPIAQGAQWVLAHRLQTSGQTPGVRSYTQ
                     AQLLLFLSAVYIGECRGVLSEGQAAALKDAMRSTADILDASLEETDRQTRLLAEMWSD
                     ASQYLLIGGGPSYATALFSAAKLVEACGVNAVAQELEEWAHIQFFLKAPRLPTLLIAP
                     PDRCLDRAVELAGI"
BASE COUNT          322 a          458 c          453 g          336 t
ORIGIN      
        1 cgcggcccgg gtcacggagt tcgagtaacg cttggcgcgc atcagataat tccctcagga
       61 ccacggtggc gtgtttcaac aggatctctc cggcctgtgt caagacggtg cgcttgccga
      121 tacgtgcaaa cacttcgaca ccaagctgtt cctctagcgt cttaatctga tggctaagag
      181 ccgattgtgt gaggtttaat gcatgtgcgg ccttcgtaaa accacctgtt tccaagactg
      241 tggtgaaggc gataagatgg cgaatctctg gaagatccac tcacatcctc ccatactgat
      301 aagatcatct agggaagctt cgagacaaga gagttcaata tcagaagaga aggttacacg
      361 atattggagt catccagatc ggagaaagcc tggtagcagt tgttatctta acatgcggac
      421 attacatctt ccatccttca ggtgccgctc cttcaggtgc cgctcctttc aatcctggga
      481 catcaaggcc gcgggtatgt ggggagcctg ccggctgaca gatggtcggc cgcccccgcc
      541 aggcgcatga ggccgggtcg agatgactat tggccatagc ctacgagcgt gatataaaga
      601 agcccaaccc aatagacgcc ttcgacagca attcctaggt atgccaatgg tgtggtcagg
      661 ctcacccatc tctctcgcag gcagaaggat acaacgcgat gattcctctg gacgatccac
      721 gacggccgat gtacgacgaa attctcaagc gtccggcatt catccgggag aacctggagg
      781 cgctggacgg gttagtccgc gccacactgc cccgcgacgc ctgtcggcaa tggacccgcg
      841 tgctcttgac cggctgtggc gattcatttt acgccggttt ggccagtgag cttgccttcg
      901 agacttggac agcactgccg gtggacgtcc agccctcgct ctcaggcgcc cgatacgcca
      961 ttcccgccat ggcaaccccg gctgtggtgt tcagtgtttc ccactcggga cgggtcgctc
     1021 gcacggtcga aacggcggcg ttggcccggt cccacggctt agacaccgtc gccgtgaccg
     1081 ggaaccctga gagcccaatc gcccagggag cacagtgggt cctcgcccat agattacaga
     1141 ccagtggcca aacccctggt gtgcgctcct atacgcaggc ccaactgttg ctgtttttat
     1201 cggctgtcta tatcggtgaa tgccgcgggg tgttgtccga ggggcaagcg gctgcgctca
     1261 aagatgcaat gcgctccacc gctgacatct tagacgccag tctggaggag accgaccgtc
     1321 agactcgtct cctggctgag atgtggagtg atgcctcaca atacctgctg atcggaggcg
     1381 ggccaagcta tgcgactgcc ctcttttcgg cggcaaaact cgtcgaggcg tgtggggtga
     1441 atgctgtggc gcaggaactt gaggagtggg cccatatcca atttttcttg aaggcgcccc
     1501 gcctgcctac gctcctcatt gcacctccag accgctgcct ggaccgtgcc gtggaattag
     1561 cggggatca
//
LOCUS       DASQSL010000551         1065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_18404, whole genome shotgun sequence.
ACCESSION   DASQSL010000551 DASQSL010000000
VERSION     DASQSL010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18404"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            429..620
                     /locus_tag="VE844_05580"
     CDS             429..620
                     /locus_tag="VE844_05580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00835.1"
                     /translation="MYRDEPLYQLNDLVWVDRGAGLWLRGEVISYRGGGLYRVGIEGH
                     GVRSVGERDLSPRRGDERG"
BASE COUNT          234 a          284 c          326 g          221 t
ORIGIN      
        1 acgacggata gtagtacaca tctacacggg cgagattcgc atgtttcagg tgaacgctgc
       61 gatggcgagt cttcagagtc ccagctctat ctcagtaaag cctgtacccc tttacaggcc
      121 cacgtttccc ctaaatctcg agattgcgtt tctcaggcga ttgtgtgctg caccgatgcc
      181 acggttgcct tgaacggaaa aagagtaaga aagcgctaga aaccgatcct agtggcgatc
      241 ctgaaggcgg atgtacctgc agtgatggac ggaattaacg tcagagttgc cgcaataacg
      301 tccccccggc taccatgcga ctgtggtggt gcacataact cacgcggtgt gggcggaacg
      361 gcgaagagaa gaagtcaggg aagcctgcaa gggatcttgc agcgactgtt tggagggtag
      421 tgaccgtcat gtaccgcgac gagcctctat accaactcaa cgatctcgtg tgggtagacc
      481 ggggagccgg gctatggctg cgaggcgagg tgatcagcta ccggggcggc ggtctgtacc
      541 gcgtggggat cgagggccac ggcgtacgta gcgtaggcga gcgcgatttg tcgccccggc
      601 gtggagacga acgcgggtaa cgcaaatttc tcatactatc tcgtactctt tacccgcaaa
      661 gatgcgaaat gttgaaaggc gatacgctcg tgcgagcgag cagaccgcta gggtcgctga
      721 aagcctcgca gtgcgccacg gctgccaaag gtaaaggatc atgtaccagc gtggatgcac
      781 ctgcatacat tcccgatgta ggaccaagca gccgatctag ctgactggga gagacccctt
      841 gaggaaagcg tagcatgccc acaacctcat ctttgttgta gtgccagctc tagaggatca
      901 ggcccggtct ctgcgcaact cttctatctg cctgtctatc tcgtccagcg ctagcccggt
      961 ggcggcttcc agccttgctc ggcgatggta ggctaggtta cgggcgaggg tacgcgcctc
     1021 ttccaagagc acgcgcatgt tgcgtagctc cgtgagttgg gattc
//
LOCUS       DASQSL010000552         1070 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_18441, whole genome shotgun sequence.
ACCESSION   DASQSL010000552 DASQSL010000000
VERSION     DASQSL010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18441"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(200..275)
                     /locus_tag="VE844_05585"
     tRNA            complement(200..275)
                     /locus_tag="VE844_05585"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(240..242),aa:Ala,seq:tgc)
     gene            complement(323..399)
                     /locus_tag="VE844_05590"
     tRNA            complement(323..399)
                     /locus_tag="VE844_05590"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(363..365),aa:Ile,seq:gat)
     gene            complement(574..>1070)
                     /locus_tag="VE844_05595"
     rRNA            complement(574..>1070)
                     /locus_tag="VE844_05595"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          235 a          332 c          288 g          215 t
ORIGIN      
        1 atccgaagca ctctcagcta gataattaat gtttgtgatc gacacgcact tcttccctcc
       61 gatcggcaag ccgatcgcaa agtagaagcc catgccgcca cggcatcgat ttctagaacc
      121 cattcacaat gtcaaagagg gcgaacatcg cccatatcag cgccgaagcg ccgaaccttg
      181 gtcttcatcc ctggaaagtt ggtggagcca gtcgggatcg aaccgacgac ctcaagcttg
      241 caaagctagc gctctcccaa ctgagctatg gccccccgaa gttgccaaag ttggcactgt
      301 ccgcgggggc accgctcagc ggtggtgggc cgagaaggag ttgaaccttc gacctcacgc
      361 ttatcaggcg tgcgctctaa ccacctgagc taccggcccc cgcagcacct gatccgacca
      421 taaggccgca ggcggcgtga gccagctcag gcatacagcc ccctaaaagg ctgttttcca
      481 ggatgaaggg acatgaggac ggcggctatg ttctttggac aggaggaagc agttccgaca
      541 acgagtgccg gcgctttccg ccatgatcct tagaaaggag gtgatccagc cgcaggttcc
      601 cctacggcta ccttgttacg acttcacccc agtcgctgac cctaccgtgg tcgcctgcct
      661 ccttgcggtt agcacagcgc cttcgggtaa agccaactcc catggtgtga cgggcggtgt
      721 gtacaaggcc cgggaacgta ttcaccgcgg catgctgatc cgcgattact agcgattccg
      781 ccttcacgga ctcgagttgc agagtccgat ccgaactgag acggcttttg gagattagct
      841 caccctcgcg ggtttgcagc ccactgtcac cgccattgta gcacgtgtgt agcccagcgc
      901 gtaagggcca tgaggacttg acgtcatccc caccttcctc cggcttatca ccggcggttt
      961 ctttagagtg cccaactaaa tgatggcaac taaagacgag ggttgcgctc gttgcgggac
     1021 ttaacccaac atctcacgac acgagctgac gacagccatg cagcacctgt
//
LOCUS       DASQSL010000553         1109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_127552, whole genome shotgun sequence.
ACCESSION   DASQSL010000553 DASQSL010000000
VERSION     DASQSL010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127552"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1109
                     /locus_tag="VE844_05600"
     CDS             <1..>1109
                     /locus_tag="VE844_05600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006766108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004352 - glutamate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0019551 - glutamate catabolic process to
                     2-oxoglutarate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-glutamate dehydrogenase domain-containing
                     protein"
                     /protein_id="HZC00836.1"
                     /translation="RANLNARAIVVLRAYAKYLRQTDSTFSQAYMEQALAHHPRIAKH
                     LIELFHARFDPKREGHAEAVSRLSAEIEEALEGVASLDEDRILRSFLGVIQASLRTNY
                     FQLDNQDSPKSYLALKLDPTLIPHLPKPRPRYEIFVYSAQVEGVHLRGGKVARGGTRW
                     SDRKEDFRTEVLGLMKAQMVKNAVIVPVGAKGGFVVKRPSAEGEAMRQEGIACYQIFI
                     RGLLDLTDNRLGDSVVPPPDVIRYEGDDPYLVVAADKGTASFSDIANAIAREYGFWLG
                     DAFASGGSAGYDHKQMGITARGAWVCVRHHFRGLGLDIQIQDLTVVGIGDMAGDVFGN
                     GMLQSEHIRLIGAFNHQHIFLDPRPDPKPSYAERRR"
BASE COUNT          217 a          333 c          340 g          219 t
ORIGIN      
        1 cgcgccaatc tgaacgcccg ggcgatcgtc gtgctccggg cctacgccaa atacctgcgc
       61 cagaccgatt ctaccttcag ccaggcctac atggaacagg ccctggccca tcatccccgc
      121 attgccaagc acttgatcga actcttccat gcccggttcg atcccaagcg cgagggacac
      181 gcggaggctg tatcgaggct ctcagccgag atcgaagagg ccttagaggg ggtagccagc
      241 cttgatgagg atcggatctt aaggagcttc cttggggtga tccaagcgag cttacggacc
      301 aactattttc aactggataa tcaagattcg cccaaatcct atctggcctt gaagctcgat
      361 cccaccctta tcccccactt gcccaagccc cggccgaggt atgagatctt cgtctattcc
      421 gcccaggtcg aaggcgtgca cctgcgcggc ggcaaggtgg cgcgcggcgg gacccgctgg
      481 tctgatcgca aagaggactt ccgcaccgag gtcttggggc tgatgaaggc gcagatggtc
      541 aagaacgccg tgatcgtgcc ggtaggggcc aagggcgggt ttgtggtcaa gcgcccctcg
      601 gccgagggcg aggcaatgcg ccaggagggc atcgcttgct accagatctt catccgcggg
      661 ctcctggatc ttaccgataa ccggctaggg gatagcgtcg tgcctccgcc ggatgtcatc
      721 cgctatgaag gcgacgatcc ctatctcgtg gtcgcggccg ataagggcac ggcgagcttt
      781 tcagacatcg ccaatgccat cgcccgtgaa tatggtttct ggctcgggga tgcctttgcc
      841 tctgggggat cggcgggcta cgaccataag cagatgggca tcacggcacg gggcgcctgg
      901 gtatgcgtga ggcatcactt taggggcctc gggcttgata ttcagatcca ggacctcacc
      961 gtggtcggta tcggcgatat ggccggggat gtgttcggca acggtatgct gcaatcagag
     1021 catatccgat tgatcggggc cttcaatcac cagcatatct tcctcgatcc caggcccgat
     1081 cccaagccga gctatgcgga acgcaggcg
//
LOCUS       DASQSL010000554         1012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_99612, whole genome shotgun sequence.
ACCESSION   DASQSL010000554 DASQSL010000000
VERSION     DASQSL010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99612"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..245)
                     /locus_tag="VE844_05605"
     CDS             complement(<1..245)
                     /locus_tag="VE844_05605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00837.1"
                     /translation="MRLASDYIHPTPRGGQCRVRIYLPEEEHDAPVVICSELPNNGGT
                     SVTHAAEQLAAEVIRSHRLPIPLVWIEHWPKESTDGG"
     gene            complement(557..>1012)
                     /locus_tag="VE844_05610"
     CDS             complement(557..>1012)
                     /locus_tag="VE844_05610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018660194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination/repair protein RecA"
                     /protein_id="HZC00838.1"
                     /translation="RALKFYSSVRLDIRRIGALKVGNDIVGNQTRVKIVKNKVAPPFK
                     TVEFDIMYGEGISKEGSLLDIGTENGVIQKSGAWFAYGDERIGQGRENAKQFLKENDE
                     VRERILGEVYEKLGLNRPASGPETQLEGVAQVAPGADGQRLEEPAEQVF"
BASE COUNT          193 a          302 c          283 g          234 t
ORIGIN      
        1 tctccaccgt cggtgctctc cttgggccag tgttcgatcc acactagcgg aatcggcaac
       61 ctatgagagc ggatcacctc tgcggctagt tgctctgcgg cgtgagtaac tgacgtaccc
      121 ccgttgttag gtagctccga acagataacc accggagcgt cgtgctcctc ttcggggagg
      181 tagatgcgaa cgcggcactg gccacctctg ggagttggat ggatgtagtc actggctagg
      241 cgcatcggtg tattgctccg gcagaaggat acacagagag cgatggtagc ccattaggga
      301 aagttgcggg aaacatcgct ggcaccgacc gcgagattca gatgggactc aaaagacctg
      361 ctaaacacaa cttttctacg tggtcggtat ttgtgaggac ggtcgataac ctaccgtctg
      421 cgggcagtat ttgttggaca tctgtggcga aaggcgtttc taacccgcac aaggttactt
      481 gtgtcaggac ttaagctcct ttatgaatca tcttgaacac ctttgtagcg gcaaaccgag
      541 tcctctacga tggcccctag aacacctgct cggcaggctc ctccaggcgc tgcccgtcgg
      601 cccccggtgc cacctgcgct accccttcta gctgcgtctc tgggccgctc gcgggtctat
      661 ttaagccaag tttctcgtag acctcgccga ggatacgctc gcgcacctcg tcgttctcct
      721 tcaagaactg cttggcgttc tcgcggcctt ggccgatgcg ctcgtcgcca taggcgaacc
      781 aggcgcccga cttctggatc acaccattct cggtgccgat gtcgagcaga cttccctcct
      841 tggagatgcc ctcgccgtac atgatgtcga actccaccgt cttgaacggc ggcgccacct
      901 tgttcttgac gatcttgacc cgcgtctggt tgccgacaat gtcgttgccg acttttaagg
      961 caccgatgcg gcggatgtct agacgcacgc tggagtagaa cttgagcgcc cg
//
LOCUS       DASQSL010000555         1739 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_155477, whole genome shotgun sequence.
ACCESSION   DASQSL010000555 DASQSL010000000
VERSION     DASQSL010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155477"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..198)
                     /locus_tag="VE844_05615"
     CDS             complement(<1..198)
                     /locus_tag="VE844_05615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00839.1"
                     /translation="MKGIMLSVVIGAVFVLAVGHAPADTGKGGPLAKVDPHLTVLYHE
                     YVSSLAQHGSAAFTPSNPLLRV"
     gene            complement(314..1648)
                     /locus_tag="VE844_05620"
     CDS             complement(314..1648)
                     /locus_tag="VE844_05620"
                     /inference="COORDINATES: protein motif:HMM:NF033540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS701 family transposase"
                     /protein_id="HZC00840.1"
                     /translation="MLPTGRSDGKEQAPPPFAIAQGDVEGFLYELRSFHDAFRSCFPR
                     REPREHFFRYMVGQFSRLERKSIEPMALAVNGGNVRAMQRFVSDDIWDEAQMRHIYHQ
                     LVYEDMGAPAGVVIVDESGFPKKGKDSVGVARQYCGTLGKVENCQVGVFAAYASPYGY
                     ALVDQQLFLPEPWFTAVYAERRTKCQVPENLAFQTKPELAGAMVRALFQEGVLPFKYV
                     VADCLYGNSADFLAAVETCWGVTYLVAIPADTRCWLHGPVMQTHSYRYRGQARTKRIV
                     TPKDSHPPTVEMIAKRLPETCWYRRTVSEGTKGPIIYEFTKRQVTLCREGIPDRAVWL
                     VLKRTVGAEPSYWYYISNAPLSTRLPTFVWLSGVRWAIEQGFEEAKTELGMDHYEVRK
                     YPSWHHHMLICMLAHVFLWHVKIRLGGKSPGLDPSPDADVIGGGPPVTEVCG"
BASE COUNT          370 a          550 c          479 g          340 t
ORIGIN      
        1 gacccgcagc agcgggttgc tgggcgtgaa cgcggcactg ccatgctgcg ccagggagga
       61 cacatactcg tggtacaaaa cggtcagatg ggggtcgacc ttggccagcg gtccgccctt
      121 gccagtgtcc gccggcgcat ggccaaccgc cagcacgaac accgccccga tcaccacgga
      181 gagcatgatg cctttcatgg tagctcccta ctgctgtcat ttgattcagc cctcggtctc
      241 ccgccgcttt ttgtgcgacc aatacgcccg atgattgcgc cgttggaccc aggcgatcaa
      301 ctcgatcacg tcttcaaccg catacttccg taacgggagg accacctcca ataacgtccg
      361 catctgggga agggtcaagg ccggggcttt ttccccccaa acggattttg acatgccaca
      421 gaaagacatg cgcgagcata cagatcagca tgtgatgatg ccagctggga tatttgcgca
      481 cttcatagtg atccatgccg agttcggttt tcgcctcttc aaaaccctgt tcgatcgccc
      541 accgcacgcc acttaaccac acaaacgtcg gcaagcgggt acttagcggg gcattgctga
      601 tatagtacca atacgacggc tctgccccta cggtgcgttt gagcaccagc cacaccgcgc
      661 gatccggtat cccctcgcga cacagcgtca cctgacgttt ggtaaattcg tagatgatgg
      721 ggcctttggt accttcagag accgtgcgcc gataccagca cgtctccggc aggcgtttcg
      781 cgatcatctc gaccgtgggc gggtggctgt ccttgggcgt cacgatccgc ttcgtccgcg
      841 cttgccctcg ataccggtaa gaatgggtct gcatcaccgg cccgtggagc cagcagcgtg
      901 tgtctgccgg gatcgccacc agataggtca ccccccagca ggtctcaacg gccgcaagaa
      961 aatccgcact attgccgtac agacaatcgg ccacgacgta cttgaacggg agtaccccct
     1021 cctggaagag cgcgcgcacc atggcgccag ccaactcggg cttggtctgg aaggcgaggt
     1081 tctccgggac ttggcacttg gtgcgacgct ccgcatagac cgccgtgaac catggctccg
     1141 ggaggaacag ctgctgatcc acgagggcgt agccatacgg cgatgcatag gccgcgaaca
     1201 cgccgacttg gcagttctcg actttgccta aagtcccaca atattgccgg gccaccccca
     1261 cagagtcttt gccctttttc ggaaagccgc tctcatccac aatgacgacg ccagcgggag
     1321 cgcccatatc ctcgtagacc agctgatggt agatgtggcg catctgggcc tcatcccaga
     1381 tatcatcgct cacgaatcgc tgcatggccc gcacgttccc cccattcacc gccagggcca
     1441 tgggttcaat cgacttgcgt tccagccgac taaactgccc caccatgtaa cgaaaaaagt
     1501 gctcgcgggg ttcacgccgt gggaagcagg agcggaaggc gtcatgaaag ctccgcaatt
     1561 cataaagaaa cccctcgaca tcgccctggg ctatcgcaaa tgggggaggc gcttgttcct
     1621 tgccatcact ccgaccggtc ggtaacatcg gctgcctcct atagagagat gaatactcca
     1681 aggcagcata ggagacgcat gtgatcgcgt caatgtagaa acgacgttgt agggttaag
//
LOCUS       DASQSL010000556         1244 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_99642, whole genome shotgun sequence.
ACCESSION   DASQSL010000556 DASQSL010000000
VERSION     DASQSL010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1244
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99642"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            129..1073
                     /locus_tag="VE844_05625"
     CDS             129..1073
                     /locus_tag="VE844_05625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_023075031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZC00841.1"
                     /translation="MQRKTGKATYRLRNWREYNAALIQRGSLTLWVSEEALGAWYDHA
                     HTGRRGAPRTYSDTAIMCMAWLSAVYRLALRTTQGLLSSVLKSLKVALPVPDYTTLCR
                     RRRSLAVSLPRRAKDEPLHVVVDATGVKVYGEGEWKVRCHGGSKRRTWRKLHVGVDEA
                     SGEIVAAVATSNDLSDGQLLSALLDQIDGQIAQVSGDGAYDTRDCYQAIETRKARAAI
                     PPRRGARIWQHGNSNTPPLARDENLRSIRRTGRGVWGKAIGYHRRSLAETAIFRIKTI
                     FGDRVHSRSFEAQGAEMLIRCRALNRMTHLGMPDSYAV"
BASE COUNT          280 a          335 c          363 g          266 t
ORIGIN      
        1 ggcatgttcc cacgctagcc cagcgacaaa gccccacctt ttaacacccc catttctgca
       61 atttctatta ccgcggggct ttgttgcaca aatagtcgcg caggcggtga gcttggtagt
      121 cttagggtat gcaaaggaag actggcaagg ccacgtaccg cctgcgcaac tggcgtgagt
      181 ataacgccgc gctcattcag cgcggaagtt tgacactgtg ggtgagcgaa gaggcgcttg
      241 gagcatggta tgaccatgca catacgggcc gacggggcgc cccgcgcacg tacagtgaca
      301 cggccattat gtgtatggcg tggttatcag cggtgtaccg actggcactg cggaccaccc
      361 agggattgct ttcttcggtg ctgaaatcac tcaaggtggc attgccggtg ccggattaca
      421 caaccttatg tcggcggcgc cgaagccttg cagtgagtct accgcgccgt gctaaagacg
      481 agcccttgca cgtggtggta gatgccactg gcgtcaaggt gtatggcgaa ggcgagtgga
      541 aggtcagatg ccatggtggg tctaagcgac gcacgtggcg taagctgcac gtcggtgttg
      601 atgaggccag tggtgagatt gtcgcggcgg tagccacgag caacgatctt agcgatgggc
      661 aactattgtc cgcgctgctt gatcagatcg acgggcaaat tgctcaagtc tcaggcgatg
      721 gcgcctatga cacacgcgac tgttatcaag cgatcgagac acgtaaagca cgggccgcga
      781 tcccgccccg gcgtggcgca cgcatctggc agcatggcaa ttcaaataca ccaccgctag
      841 ctcgcgatga gaatctgcga tccattcggc gcacaggccg tggcgtctgg ggaaaagcaa
      901 tcggctatca tcgacgcagc ttagccgaga ccgccatatt tcgtatcaag accatcttcg
      961 gtgatcgggt gcactcgcgc agctttgaag cacaaggcgc agagatgctc atccgctgcc
     1021 gcgccttgaa ccgcatgacc cacttaggta tgccagatag ttatgccgtg tgacgcacgc
     1081 ttcacatcaa gcagtctgcc ttgtccaaga tttatgcaac aaagcccata gccattatag
     1141 agatgaccca gggcgtccat ggtattagga tcatgtgcgc ataatctacc tcaatgagct
     1201 ttgaatgata ttttgcgccg cgatttacct gattatatga ggta
//
LOCUS       DASQSL010000557         7131 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_4773, whole genome shotgun sequence.
ACCESSION   DASQSL010000557 DASQSL010000000
VERSION     DASQSL010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 7131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7131
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4773"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1326)
                     /locus_tag="VE844_05630"
     CDS             complement(<1..1326)
                     /locus_tag="VE844_05630"
                     /inference="COORDINATES: protein motif:HMM:NF017591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase PhoX"
                     /protein_id="HZC00842.1"
                     /translation="MTRREPNNAVSECRDRIGEDTAHELAPWRHGKGEYFGNILRQCM
                     DRRGFLKGAGALGVSLVVAPVWFKLSQVKADQAPQLPDPGSRISFPPIQPSFEDQVIV
                     PKGYSYNLILRWGDPLFPGAPEFDLHQQTGAQQAQQFGYNCDFIGFFVLPELIHRGAL
                     RFGRPSAKTPHWFSRLYGYFSRLPSRQALLVVNHEYTTGGDMFPGYDKDNPTQDQVET
                     EIAAHGASIIEIKVQCNGSWEFVKNSSFNRRITGSSELEITGPLAGHSLLQTHQDPNG
                     RQVLGMLNNCAGGKTPWGTALSCEENFDQYFGNFATLKATDPAKAALYERLSPEDGET
                     ERKWERFDARFDAAQEPNEYARFGYVVEIDPYDPGFTPKKRTTLGRFKHEGAVPVLTR
                     DGRVAVYLGDDGRFEYVYKFITRGMFEPWDRPHNLALLDEGTLYVARFKP"
     gene            1448..1672
                     /locus_tag="VE844_05635"
                     /pseudo
     CDS             1448..1672
                     /locus_tag="VE844_05635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006669487.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
     gene            1887..2867
                     /locus_tag="VE844_05640"
     CDS             1887..2867
                     /locus_tag="VE844_05640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015436677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PstS family phosphate ABC transporter
                     substrate-binding protein"
                     /protein_id="HZC00843.1"
                     /translation="MLLAGVLSALPAAAKTLIHIDGSSTVYPVTEAVAEEFQKAKKGA
                     VNVTVGISGTGGGFKKFCRGETGISDASRPILKEEMEVCAQNGIKYIELPVAFDALTV
                     VVNKANTWVDHLTVAELKEVWEPEAQGKVQNWKEIRPGFSDVPLALFGAGADSGTFDY
                     FTEAIVGKAKSSRGDYTASEDDNVLVQGVSRDKNALGYFGLAYYVENKGKLKAVPIKL
                     EEGKPAVSPSIETVNNGTYQPLSRPIFIYVNDKSAKKPEVKEFVEFYLKHGGELSKEV
                     GYVNLPDKAYELALKNFQNHKLGTAFGGVAEVGVRVEDLLTREATLTAGQ"
     gene            2959..3915
                     /gene="pstC"
                     /locus_tag="VE844_05645"
     CDS             2959..3915
                     /gene="pstC"
                     /locus_tag="VE844_05645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016860212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HZC00844.1"
                     /translation="MHSASEHPQAAAALAVIPARSRFAHRPLRHWRERLVEAVLFLAA
                     FSAVATTLAIVFVLFYESLAFFEHVSFVDFLTDTQWTIMFTEKHYGILPLVSGTLVTS
                     GIALLVAVPLGTVIAIYLSEFAPYHLRETMKPLLELLGGIPTVVYGYFALLFVTPALQ
                     LMIPDLPGFNMLSAGIVIGIMIIPYVSSISEDAMRAVPMAMREASYAMGATRFQTALR
                     VVAPAAISGIMASYILGVSRAVGETMVVAVAAGQQPNFTWDPREPAATITAYIVQVAL
                     GDLPHGSLEYQSIFAAGLVLVLLTLVFNVLGHLLRKRFREAY"
     gene            3915..4838
                     /gene="pstA"
                     /locus_tag="VE844_05650"
     CDS             3915..4838
                     /gene="pstA"
                     /locus_tag="VE844_05650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008058276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HZC00845.1"
                     /translation="MAVGNVEQIRRLVARRKRWDLIFSLVGLLCMLVGVMTLLVLCAD
                     LVRDGIGRLDWGFFTSFPSRRAAQAGILSAWVGTSLVMLVTATAAIPLGIMAGIYLEE
                     YAPRNWVTELIEINVTNLAGVPSIVYGLLALGLFVYEFDLGQSILTAGLTLALLILPV
                     VIVATREAIRAIPRDIREGAYALGATRWQTVKDHIIPYSLGGILTGVIIGLARAIGET
                     APVITIGALTFIAFLPSPPVTSEYPYLSFDWLFSPFTVMPIQMFNWVSRPQAAFLENA
                     AAAGIVLIVMTLAMNAFAIWLRFRFRKRIKW"
     gene            4843..5691
                     /gene="pstB"
                     /locus_tag="VE844_05655"
     CDS             4843..5691
                     /gene="pstB"
                     /locus_tag="VE844_05655"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018150319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HZC00846.1"
                     /translation="MNETLNKLYFRPLAVSERNKAPTTQAHEVSKLKAEAKGLSFYYG
                     EVQALKAVDLPVAEHRVTALIGPSGCGKSTFLRAVNRMHDLYPGSRYEGEIRFYPDDI
                     DLLDKDVDPIEVRMRIGMVFQKPNPFPKSVFENVAYGLRVRGERNRHVLADKVEQALR
                     NAALWKEVKNRLADMAFNLSGGQQQRLCIARALATEPELLLFDEPTSALDPIAAASIE
                     ELIQELEARVTILIVTHNMQQAARVSDFTAFMYLGELVEFAPTKTMFTNPSDPRTENY
                     LTGRFG"
     gene            5717..6466
                     /gene="phoU"
                     /locus_tag="VE844_05660"
     CDS             5717..6466
                     /gene="phoU"
                     /locus_tag="VE844_05660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010638778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HZC00847.1"
                     /translation="MNSEQRTHTVKQYDEELTALRQLVLDMGALVKEQIAQAVAALER
                     GDIEAADLVIHRDHEVNDYDVKIDDETVALIARRQPVASDLRLLMSMIKTVADLERIG
                     DKAKKIGRMTLLFSQHATHPSNAGLLRDVSTMAKLALEMLQGALDALARLDVVAAVSI
                     ARGDQALDAEYQAALRRLITYMMEDPRVIGQAIDILFVVKALERVGDHAKNIAEYVIY
                     LVKGKDVRHASLEHLSEAARTGHTASTEPTA"
     gene            6823..>7131
                     /locus_tag="VE844_05665"
     CDS             6823..>7131
                     /locus_tag="VE844_05665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00848.1"
                     /translation="MPSLERYPGLQSPLEQSKKSQEKTRPLRDLRAQFETLDKLFGVE
                     TTLLPDGTLHVLQGQIVSRISPLGELEQIDLNLKASETGGEGESRRIPLIEPEVVVGD
                     R"
BASE COUNT         1433 a         2113 c         2099 g         1486 t
ORIGIN      
        1 gggcttgaac ctggcgacat aaagcgtgcc ttcatcgagc agggccaggt tgtgaggccg
       61 gtcccaaggc tcgaacattc cccgggtaat gaacttataa acatattcga aacgcccatc
      121 gtcacccaag tacaccgcta cccggccatc gcgcgtgagc acggggaccg ccccctcgtg
      181 tttgaagcga ccgagtgttg tgcgcttctt gggcgtgaag ccgggatcgt aagggtcgat
      241 ctcgacgaca tagccgaaac gggcatactc attcggttct tgggcggcat cgaagcgcgc
      301 gtcgaatcgc tcccatttgc gctctgtttc gccatcctca gggctgagcc gctcgtatag
      361 ggcggctttg gccgggtccg tagctttgag ggtggcaaag ttgccgaagt attgatcgaa
      421 gttctcctcg caactgagcg ctgttcccca cggggtctta ccacccgcac agttattcag
      481 catcccaagc acctgcctcc cgtttggatc ctgatgggtc tgtagcaggg aatggccggc
      541 gagcggacct gtgatctcga gctcggagct tccggtgata cgacggttga aggaagagtt
      601 cttcacaaac tcccaggagc cgttgcactg cactttgatc tctatgatcg aggcaccatg
      661 cgcggcgatc tcggtctcga cttggtcttg ggtaggattg tctttgtcgt atcctgggaa
      721 catgtcgccg cccgtcgtgt attcgtggtt caccaccagc agtgcttggc gcgaaggcag
      781 gcgtgagaag tagccataga gtcgtgagaa ccaatggggg gtcttggcac ttggccgacc
      841 aaaccgcagc gcccccctat gaataagttc cggcaacaca aagaaaccga taaagtcaca
      901 gttgtagcca aactgctggg cctgctgtgc cccggtctgc tggtggagat cgaattccgg
      961 ggccccgggg aagaggggat caccccagcg caggatcagg ttataggagt atccctttgg
     1021 cacaattacc tggtcctcga acgagggctg gataggaggg aagctaatcc gactgccggg
     1081 atcaggcaac tgaggagcct ggtctgcttt gacctggctc agcttaaacc atactggtgc
     1141 taccactagg cttaccccca gggcaccggc acccttcagg aagccgcgcc ggtccatgca
     1201 ctggcgcaag atattcccaa aatattcccc ctttccatga cgccaagggg cgagctcatg
     1261 tgcagtgtcc tctcctattc gatctcgaca ttcgcttacc gcgttgttag gctctcgtcg
     1321 tgtcataggc ttcttctctc aatatttact ttttgcactg ggtgcaggtt taggtgacaa
     1381 atagtctaga agttgcgaat gaagcgctta tgacaagacc gtgaaatttt tatgcatctg
     1441 tcctacttat gccaatcccc ggctgagccc cgatggccgt tccctctgct ggatcggctg
     1501 gtatcacccg aacctgccct gagacggcac cgagctttgg ctagctgaga tcgacgatga
     1561 cggccaagcc ggtcaggccc aaaggattgc tggtgggccg gaagaatcga tcttccagcc
     1621 cgaatggtct ccagacggga ctttatattt catctccgat cgcaccggct ggtgaaatct
     1681 ctaccgttgg caacagggca tgatctctcc tgtggtgcaa agagtgggat cggggcgcat
     1741 cggctcacgt gataacgcct ggaccgagcg cctggtgcat gaggtcataa aagcgtcaca
     1801 taacgccttt aaattattgg agttaacgat tgtaagggag atatggcatg aacccagaaa
     1861 cgattcgcag gtgaataagc accgccgtgc ttctcgccgg ggtgcttagc gcgctgccag
     1921 ccgccgccaa gacccttatc cacatcgacg ggtcgagtac cgtttaccca gtcactgaag
     1981 ccgttgcgga ggaattccag aaggccaaga agggggcggt taacgtgacc gtcgggattt
     2041 cgggcaccgg cggcggattc aagaagttct gccggggcga gaccggcatc tccgacgcct
     2101 ctcgccccat cctcaaggag gaaatggagg tctgcgctca aaacggcatc aaatacattg
     2161 agctgccggt ggccttcgat gccttgacgg tggtggtcaa caaggccaac acctgggtgg
     2221 accacctgac cgtggctgag ctcaaggagg tatgggagcc cgaggcgcag ggcaaggtcc
     2281 agaactggaa agagatccgc cctggcttct cggatgtgcc ccttgcgctg ttcggcgcgg
     2341 gggccgactc ggggacgttt gactacttca ccgaggcgat tgttggcaag gccaaatcga
     2401 gccgcggtga ctacaccgcc agcgaggacg ataacgtgct ggtacaggga gtgtcgcgcg
     2461 ataagaacgc gctcgggtat tttggcctcg cctattatgt ggagaacaag ggcaagttga
     2521 aggcggtgcc catcaagctt gaggagggca agccggccgt gtcgccctcg atcgagacgg
     2581 tcaataacgg cacgtatcag ccgctttccc gtccgatctt catctatgtc aacgataaat
     2641 cggccaagaa accggaggtg aaggaattcg tcgagttcta cctcaagcac ggcggcgagc
     2701 tgtccaaaga ggtcgggtat gtcaacctcc ctgataaggc atacgaactg gcgctcaaga
     2761 atttccaaaa tcataaactg gggacagcct tcggcggagt ggcggaggtc ggcgtgcgcg
     2821 tagaggacct cttgacacgg gaagcaactc tgacagcagg acagtgattg ctgatgcgtg
     2881 accggttaga catcaggggt cgtcgtccgg cgccccttgt tgttctggag tcccccaaga
     2941 taaatcggat cacgcgcgat gcacagcgct agtgaacatc cacaagcggc ggcagcgctg
     3001 gccgtgatcc cagcccgttc gcgctttgcc caccgcccgt tgcgccattg gcgcgagcgt
     3061 ctcgtcgagg ccgtgctgtt cctcgccgcc ttctccgccg tcgcgacgac gctcgccatc
     3121 gtcttcgtcc tcttctacga atcgctcgcg tttttcgagc atgtgtcgtt cgttgacttc
     3181 ctcaccgaca cccagtggac catcatgttc acggagaagc actacgggat tttacccctg
     3241 gtgagcggga ccctggtgac ctccggcatc gcgctgctcg tggcggtccc cctcggcacc
     3301 gtgatcgcga tctacttgag cgagtttgca ccctatcacc tgcgcgagac gatgaaaccc
     3361 ctcctcgagt tgctcggcgg catcccgacc gtggtctacg gctactttgc cctgctgttt
     3421 gtcacccccg ccctgcagct gatgatcccg gatctgcccg gtttcaacat gctgagcgcc
     3481 gggatcgtga tcgggatcat gatcatcccg tacgtcagct cgatcagcga ggacgcgatg
     3541 cgcgccgtgc ctatggcgat gcgcgaggcg tcttacgcga tgggcgcaac gcgctttcag
     3601 acagcgctac gagtggtggc accggcggcc atctccggga ttatggcctc gtatatcctg
     3661 ggtgtctccc gcgcggtcgg cgagacgatg gtcgtggcgg tggccgcggg ccagcagccg
     3721 aacttcacct gggaccccag agaacccgcc gcgacgatca ccgcctacat cgtgcaggtt
     3781 gccctgggcg acctgcccca cggcagcctg gagtatcaga gcatcttcgc cgccgggctc
     3841 gtgctggtcc tcctgaccct ggtgttcaac gtcctcgggc acctgctgcg caaacggttc
     3901 cgggaggctt actgatggct gtgggaaacg tcgagcagat ccgccgcctc gttgcccgcc
     3961 gcaagcgctg ggacctcatc ttttccctcg tggggttgct ctgcatgctg gtcggggtca
     4021 tgaccctgct cgtgctctgt gccgatctgg tgcgtgacgg tatcggtcgc ttggattggg
     4081 gcttttttac ctcgtttccc tcgcgccggg ccgcgcaggc cggcatcctc tcggcgtggg
     4141 tcggtaccag cctagtcatg ctggtgaccg ccacggcggc cattcccctc ggtatcatgg
     4201 cggggatcta cctcgaagaa tatgcgccgc gcaattgggt tacagaactc atcgagatca
     4261 acgtcaccaa tctcgcgggc gtgccctcca tcgtctatgg cctgctcgcc ttggggcttt
     4321 ttgtctacga gttcgacctc ggccagagca tcctcaccgc ggggctcacc ctcgcgctcc
     4381 tgatcctgcc ggtggtgatc gtggccacgc gcgaggccat ccgcgctatc ccgcgcgata
     4441 tccgcgaagg ggcctacgcc ctgggggcga cccgctggca aaccgtcaag gaccatatca
     4501 tcccctattc cctggggggc atcctcaccg gggtcatcat cggcctggct cgagccatcg
     4561 gcgagaccgc accggtgatc accatcgggg ccctgacctt catcgccttc ctgccctcgc
     4621 cgccggtcac gagcgagtat ccctacctct cgttcgactg gctattttcg ccgttcacgg
     4681 tgatgccgat ccagatgttc aactgggtct cgcgccccca ggcggcgttc ctggaaaatg
     4741 cggcggccgc tggcatcgtg ctcatcgtca tgacgctagc gatgaacgcc tttgccatct
     4801 ggctgcggtt tcgctttcgc aagcgcatca agtggtagcg cgatgaacga aacgctcaat
     4861 aagctgtatt ttcgcccgct cgctgtcagc gagcgcaaca aggcgccgac aacccaggcg
     4921 catgaggtga gcaagctcaa ggcagaggcc aagggcttga gcttttacta tggggaggtc
     4981 caggcgctca aggcggtcga tctgcccgtc gccgagcacc gggtgaccgc cctcatcggc
     5041 ccctcgggct gcggcaagtc gacgttcctc cgggctgtca accgcatgca tgacctctat
     5101 cccgggagcc gctatgaagg ggagatccgc ttctacccgg atgacatcga cctgctcgac
     5161 aaggacgtgg accccataga ggtgcggatg cgcatcggga tggtgtttca aaaacccaat
     5221 cccttcccca agtccgtgtt cgaaaatgtg gcctatgggc tgcgcgtgcg cggggaacga
     5281 aatcggcacg tgctcgctga taaggtcgag caggcgttgc gcaatgctgc gctctggaag
     5341 gaggtaaaga accgtttggc cgacatggcc tttaatctat cgggagggca gcagcaacgg
     5401 ctctgcatcg cccgcgccct tgctaccgag cccgagctct tgctcttcga tgaacccacc
     5461 tcggccctgg atcccatcgc cgcggccagc atcgaggaac tcatccaaga actcgaggcg
     5521 cgggtgacca tcctcatcgt cacgcacaac atgcaacagg ccgcgcgcgt ctcggacttt
     5581 acggccttta tgtacttggg cgagctcgtc gagttcgcgc cgaccaagac tatgttcacc
     5641 aacccttctg atccgcggac cgagaactac ttgaccggtc gtttcggata aggcaaagag
     5701 aagtctcgag ggcaacatga actcagagca acgtacacat accgtgaagc agtacgacga
     5761 ggagctgacc gcgctgcgtc agctcgtgct ggatatgggg gcactggtca aggagcagat
     5821 cgcccaggcc gtcgccgcat tggagcgagg ggatatcgag gcggccgacc tcgtgatcca
     5881 tcgcgaccac gaggtcaacg actatgacgt caagatcgac gatgagacgg tggcgctaat
     5941 cgcgcggcgg caaccagtcg cgagcgatct gcggctcttg atgtcgatga tcaagaccgt
     6001 ggcggatctc gagcgcatcg gcgataaggc gaagaaaatt ggccgaatga cgcttctgtt
     6061 tagccagcac gccacacacc cgtctaatgc cgggctgctg cgcgatgtgt cgaccatggc
     6121 gaaactggcc ttggagatgt tacaaggcgc actcgacgcg ctagcgcgcc tcgatgtggt
     6181 agcggcggtg agcatcgccc gaggggatca ggcactcgac gcggagtacc aggcggcctt
     6241 gcgccgcttg atcacctata tgatggagga cccgcgggtg atcggtcagg ccatcgacat
     6301 actcttcgtt gtcaaggcac ttgagcgcgt cggcgaccat gccaagaaca tcgccgagta
     6361 tgtgatctat ctggtcaagg gcaaggatgt gaggcacgcc agcctggagc atttgagcga
     6421 ggcggccaga accggtcaca cggcttctac ggaaccgacc gcttgagatg gtccaagcca
     6481 acaccactca caccgctgcc ctctccacac tgtcaagtgc tccatgattg ctgctacccc
     6541 gccttgatgc tcaagaggcc tctgactgcg gccttttgag tccatgccaa tgctggatgg
     6601 agtcctatcg ccagctcaac gtttgactct acaatctaac tttgggaatg gcgtatattc
     6661 tctcccgtgt ccctggatta atctttgaat gtagattttc acctgtatca aaaaccctcc
     6721 tatgtggcga ctccttccgc ttcctcccta aattgattag ggataaaaaa ctgtaatttt
     6781 tcaagtactt agccttggca acgtctgcta taatgggaaa atatgccaag tctcgaaaga
     6841 taccctggcc tacaatcacc attagagcag agcaaaaaaa gtcaggagaa aacaaggcca
     6901 cttcgagacc ttagagcgca gtttgagaca ctagacaagc tttttggcgt ggaaactacc
     6961 ctactgccgg atggaacgct ccatgttcta caaggacaga tcgtctcccg catatcgccg
     7021 ttaggagagc tggaacagat agacttgaat ctgaaagcga gcgagaccgg cggagagggc
     7081 gagagcagga gaataccgct gattgagcct gaggtggttg ttggcgatcg t
//
LOCUS       DASQSL010000558         1148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_73075, whole genome shotgun sequence.
ACCESSION   DASQSL010000558 DASQSL010000000
VERSION     DASQSL010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73075"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            160..555
                     /locus_tag="VE844_05670"
     CDS             160..555
                     /locus_tag="VE844_05670"
                     /inference="COORDINATES: protein motif:HMM:NF013842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 transposase-related protein"
                     /protein_id="HZC00849.1"
                     /translation="MSGYSVDLRERIVSAVGGGMSKAQAARTFSVSLSSVKRYVNKAK
                     RGQSLAPKKRPGSTPKLDEKARKLLAADLEERPYLTLQERCDYIETVTGLSVSRSTMC
                     RDIARIGSTRKKGDESPRSATSSRGRPGG"
     gene            555..1106
                     /locus_tag="VE844_05675"
     CDS             555..1106
                     /locus_tag="VE844_05675"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC00850.1"
                     /translation="MVAEEISAERLVFVDECGTHTSLAPIYGYAPRGERLSVSVPRNR
                     GKNTTLLSSMTTDGMGPSLAVEGTTTARVFETYVEKVLVPGLRAGQIVVMDNLSAHKP
                     RRVRQLIEERGCELIYLPPYSPDLNPIEEAFSKIKNLLRKVAARSKEALEEAMGWAIS
                     AVSLEDARGYFEHAGYRPTGHLL"
BASE COUNT          266 a          327 c          342 g          213 t
ORIGIN      
        1 tggcgaggtc tgagggtagc tgctgtaggc agcctcaccc ttcctcttct tcttgccctt
       61 attcaccgaa gtgcgtggaa ggggaatgca ccgaacttcg cctatacggc gttcttacag
      121 cacgttgcac cgatagtgac ccgatgagaa catggtcaca tgagcggtta ctcagtagac
      181 ctcagagaga ggatagtctc cgccgtagga ggtggcatgt ccaaggccca ggcagcccgc
      241 accttctccg tgagcctctc ctcggtcaaa cgttacgtca acaaggccaa aaggggacaa
      301 tcgctggctc cgaagaagag gcccggatct actccgaagc tcgacgagaa agccagaaag
      361 ctccttgctg ccgatcttga ggaacgtccc tacctcaccc tccaggaacg ctgcgactac
      421 atagagaccg tcacagggct ctcggtgagt cgctccacca tgtgtcgcga catagcccgc
      481 ataggctcca cgaggaaaaa gggggacgag tcgccacgga gcgcgacgag ttcgagaggg
      541 cggcctggcg ggtgatggtg gctgaggaga tctctgccga gaggttggtg tttgtggacg
      601 agtgcggcac gcacacctcc ttggcaccga tctacggcta tgctccaaga ggtgagcgcc
      661 tgagtgtgtc ggtgccgcgc aaccgcggga agaacaccac cctgctttcg agcatgacca
      721 ccgatgggat ggggccatcg ctggccgtag aaggaacgac caccgcccgg gtatttgaaa
      781 cctacgtaga gaaggtgctg gtgccaggcc tgcgtgcagg acagatcgta gtgatggata
      841 acctctctgc ccacaaaccc aggagggtga gacagctgat cgaggagcga ggctgtgaac
      901 tcatctacct gccgccttac tccccggatc tcaaccctat tgaagaagct ttcagcaaga
      961 tcaagaacct gctgcgcaag gttgcagcca ggagcaaaga agctttggaa gaagcgatgg
     1021 gctgggctat ctcagcggta agtctcgaag acgcccgagg ctacttcgag catgccggat
     1081 accgccctac gggtcaccta ctgtgaaacg cgctgtagag aactacatat cacactatcg
     1141 tcactgcg
//
LOCUS       DASQSL010000559         2211 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_99682, whole genome shotgun sequence.
ACCESSION   DASQSL010000559 DASQSL010000000
VERSION     DASQSL010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2211
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99682"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(136..981)
                     /locus_tag="VE844_05680"
     CDS             complement(136..981)
                     /locus_tag="VE844_05680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00851.1"
                     /translation="MRNLWLWVFSVWLMGCTTMPAVHTDLAFSHDPSKATGKLLLVID
                     DKGRLEQTANGESALEALSRHVKDGLRQRGYNVAAASDRGRTNAEITHLIEEKDTQDP
                     ILKDYSQVLAVKVHSAQKGKTPLGFSITFGDSDPRAQGFQKTNLTPISCTLLDAKDLR
                     EQASLTDYRSALNPQLDQGTIYAKDIQVVCHTLLAKLGVDRNMTEEDLPARSRLSKGS
                     QEEEPGSNESSTEETIARSRPSMESAKSEETVERSSDSQGRKQIKILNQGNTLILEFG
                     HNRRY"
     gene            complement(1007..1615)
                     /gene="ureG"
                     /locus_tag="VE844_05685"
     CDS             complement(1007..1615)
                     /gene="ureG"
                     /locus_tag="VE844_05685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007040946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019627 - urea metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreG"
                     /protein_id="HZC00852.1"
                     /translation="MQRQALRVGVGGPVGSGKTALVDALCKSMRDQYRIAVVTNDIYT
                     KEDAQFLIRSEALTADRIIGVETGGCPHTAIREDASINLVAVDEMIRRFPDLDLILVE
                     SGGDNLSATFSPELADLTLYVIDVAAGDKIPRKGGPGITRSDLLVINKIDLARYVGAS
                     LAVMERDARTMRGVRPFVFSNMKTGEGLAMIHDFIVRAGLLE"
     gene            complement(1635..>2211)
                     /locus_tag="VE844_05690"
     CDS             complement(1635..>2211)
                     /locus_tag="VE844_05690"
                     /inference="COORDINATES: protein motif:HMM:NF013858.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="urease accessory UreF family protein"
                     /protein_id="HZC00853.1"
                     /translation="QWVRDEADVAAWIEGQLTHVLGTLDIPVFARLYEAWGISGDHAA
                     LEYWSRFLLAARESAELLAEDRYLGMALARLLAELGIEEARPWQNCKQTSFATLFALS
                     VKHWDIDLREGAEAYAWVWCEHQVAAAVKLIPLGQTAGQRILLNLAEVIPEVIGAGLD
                     LTDDEKIGGVAPGLGIASALHEVQYSRLFRS"
BASE COUNT          471 a          657 c          573 g          510 t
ORIGIN      
        1 tcctcgatgg cgtaataggt cccctggaga ttaaataccg cgatctgcac ctcatcgaca
       61 ctgatgatcc gccgttctcc gggtttgaat tggtcagtgc gagccacatc gatccagtcg
      121 gacataaagg tctcctcaat accgcctgtt gtgaccaaac tccaagatca gggtattgcc
      181 ctgattaagg atctttatct gttttctacc ctgtgaatcg ctgctgcgtt cgacggtctc
      241 ctcggattta gcactttcca tggagggtct ggatcgcgct atagtctcct cggtcgagga
      301 ttcattagac ccaggctcct cctcttgact acccttggaa agcctagaac gagcaggcag
      361 gtcttcttcg gtcatgttgc ggtctacccc gagttttgca agcagggtgt gacagactac
      421 ttgaatatcc ttggcataga tagttccttg atcgagttgg gggttcagag cggacctata
      481 gtcggtgagg ctcgcctgtt cacgaagatc tttcgcatcg agtaaagtgc aggaaatagg
      541 ggtaaggttt gtcttctgaa atccctgggc gcgcggatcc gagtctccga aggtgattga
      601 aaagccaagg ggcgtcttgc ccttttgggc gctatgcacc ttgaccgcca acacctggga
      661 atagtccttt aagatgggat cctgcgtgtc tttttcttcg atcagatggg tgatttccgc
      721 gttggttcga ccccgatctg aggcagcggc tacgttataa cccctctgcc tcagcccatc
      781 cttcacgtgg cgagaaagag cctcaagcgc gctctcgccg ttcgccgttt gctcaagcct
      841 acccttatcg tcgatgacaa gtagcagctt accggttgcc ttcgatggat cgtgggagaa
      901 tgccagatct gtgtgcaccg cgggcatcgt tgtacagccc ataagccata cgctaaacac
      961 ccaaagccag agattccgca ttttaaagct cctcagagtg gtttttctat tccagtagcc
     1021 ccgctctcac gatgaaatcg tggatcatgg ctaagccttc gcccgtcttc atattggaaa
     1081 agacaaaggg ccggacgccg cgcatcgtac gagcatcgcg ttccataacc gcgagcgagg
     1141 cgccgacata acgggcgaga tcgatcttat tgatcacgag cagatccgaa cgggtgatcc
     1201 cgggtcctcc cttgcgcggg atcttgtcgc ccgcggcgac gtcgatcaca tagagcgtca
     1261 gatcggccag ctccgggcta aaggtagcgc tcaggttatc gccaccgctt tcgaccagga
     1321 tcaggtccag atcggggaaa cgccggatca tctcatcgac cgccaccaag ttgatcgagg
     1381 cgtcttcccg gatcgccgta tgcgggcacc caccggtttc aacgccgatg atgcggtcgg
     1441 cggtaagggc ctcgcttcgt atcagaaact gcgcatcttc cttggtgtag atatcatttg
     1501 tgaccaccgc gatccgatac tgatcccgca tggacttgca cagagcatcc accagcgcag
     1561 tttttcccga accgaccggt ccacccacgc ctacccgtaa tgcctgtctt tgcatgcctt
     1621 aaaccttaga tttatcagga acgaaataac cggctgtatt gcacctcgtg cagggcgctg
     1681 gcgataccga gccccggggc cacgcctccg atcttctcat catctgtcag atccagccct
     1741 gcgccaatga cttcaggaat tacctcggcc aggttcaaaa gtatccgctg tcccgccgtc
     1801 tgacccaggg gaatcaattt taccgctgct gcgacctgat gttcacacca aacccaggca
     1861 taggcctcag ccccttcccg aagatcgata tcccaatgct tgacgctcag ggcaaacagg
     1921 gtagcgaaac ttgtttgttt acaattctgc cagggccggg cctcttcgat cccgagctca
     1981 gccagcaagc gggctaaggc catacccaga taccggtctt cggcgagcaa ttcggccgat
     2041 tcacgggcag caagcaagaa gcggctccaa tactcgagcg cggcatgatc gccgctaatc
     2101 ccccatgcct catagagcct cgcgaatacc gggatatcga gggttccaag gacatgggtc
     2161 aactgcccct cgatccaggc ggctacgtca gcctcatcgc gcacccattg g
//
LOCUS       DASQSL010000560         1184 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_18543, whole genome shotgun sequence.
ACCESSION   DASQSL010000560 DASQSL010000000
VERSION     DASQSL010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1184
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18543"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..312
                     /locus_tag="VE844_05695"
     CDS             <1..312
                     /locus_tag="VE844_05695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008932684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circularly permuted type 2 ATP-grasp protein"
                     /protein_id="HZC00854.1"
                     /translation="GYGMLIGPHATQVQRDQFVRLIEHDRRNYIAQPTLSLSTVPTLC
                     EEELGPRHVDLRPFILSGSERYVTLGGLTRVALRKGSLVVNSSQGGGSKDTWIIDTEE
                     E"
     gene            315..>1184
                     /locus_tag="VE844_05700"
     CDS             315..>1184
                     /locus_tag="VE844_05700"
                     /inference="COORDINATES: protein motif:HMM:NF016086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-E domain-containing protein"
                     /protein_id="HZC00855.1"
                     /translation="MLSRVAEQLYWMARYIERAEDTARIINVHTHLLLDLPKGTAFGW
                     ESLIFIVGSEELFYQRYPTANEQSVVKFMLADPENSSSILSALHRARENLRTTRDSVP
                     REAWEKLNNLYLYVKNHVDEAIARRSRYAFLEHIIESSQIINGLLAGTMSHDYAYDFV
                     RIGRNIERTDMTTRIVDVCSANLLPKQTGDLTPFENIQWMSVLKSLSAYQMYRRHVHV
                     RVNGAGVLRFLLQDPNFPRSVYHCLGEVQHSLNKLPRNEAPLHSTLRLKRQVYEVDVR
                     DLTNQELHSFIDAL"
BASE COUNT          262 a          330 c          322 g          270 t
ORIGIN      
        1 ggctatggta tgctcatagg gcctcatgct actcaggtgc agcgagacca atttgtgcgg
       61 cttatcgagc atgatcggcg caactacatc gcccagccta cgctctcgct gtctaccgtg
      121 cctaccctgt gcgaggagga actcgggccg cgccatgtcg atctgcgccc cttcatcctg
      181 tcagggagcg agcgctatgt gaccctaggc ggattgacgc gcgtcgcgtt gcgcaaaggg
      241 tcgctcgtgg tcaactcctc gcaagggggt ggcagcaagg atacgtggat catcgacacg
      301 gaggaggaat aaccatgcta tcccgtgtgg ccgagcagct ttactggatg gcgcgttata
      361 tcgagcgtgc cgaagataca gcgcgtatta ttaacgtcca tacacacctg ctcttagatc
      421 tacctaaagg cacggccttc ggttgggagt cgctgatctt catcgttggc agcgaagagt
      481 tattctatca gcgttatcca acagccaatg agcaaagcgt agtcaagttc atgctcgccg
      541 atccggagaa ctcgagctcc atcctatctg cgctgcacag ggcccgggaa aacctgcgca
      601 ctacccggga tagcgtgccg cgtgaggctt gggagaagct caacaacctc tacttgtatg
      661 taaaaaatca tgtcgatgag gcgatcgccc ggcgttcccg ctatgcgttt ttggagcaca
      721 tcatcgaaag ctctcaaatc atcaacgggc tgttagcggg caccatgagt catgattacg
      781 cctatgactt tgtacgtatc ggccgcaata tcgagcgcac cgatatgacg acccggatcg
      841 tcgatgtatg ctccgctaac ctcctgccga agcagacggg tgatctgact ccctttgaaa
      901 atatccagtg gatgagcgta ctcaagtcct tatcggccta tcagatgtat cgccgccatg
      961 tccatgtacg tgtgaacggg gcgggcgttc tgcgtttttt gttgcaggat ccgaacttcc
     1021 cgcgatcggt ctatcactgc ctgggtgagg tacaacatag cctgaataaa ttgcctcgaa
     1081 atgaggcgcc gcttcacagc acgttgcggc tcaaacgcca agtctatgag gtcgatgtcc
     1141 gggacctgac caaccaagaa ctgcactctt tcatcgacgc gtta
//
LOCUS       DASQSL010000561         3496 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_84773, whole genome shotgun sequence.
ACCESSION   DASQSL010000561 DASQSL010000000
VERSION     DASQSL010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3496
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84773"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..390)
                     /locus_tag="VE844_05705"
     CDS             complement(<1..390)
                     /locus_tag="VE844_05705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011137081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HZC00856.1"
                     /translation="MKPIIAILGRPNVGKSTLFNRLTQGRDALVAEEPGLTRDRLYGI
                     GKTDDRSYVVIDTGGLYQGQKGLAELVTQQSLQAAREADAVIFLVDGQEGFTPQDEII
                     ASRLRSLDKPIQLAVNKTEGRDPAIAVA"
     gene            complement(406..1581)
                     /gene="bamB"
                     /locus_tag="VE844_05710"
     CDS             complement(406..1581)
                     /gene="bamB"
                     /locus_tag="VE844_05710"
                     /inference="COORDINATES: protein motif:HMM:TIGR03300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamB"
                     /protein_id="HZC00857.1"
                     /translation="MNGRILPCLISLVLTTFSGCGGVTDYMTEWVAGEEPAEPPAPLV
                     ELKPTLTIEALWSEDVGSGGPKQHLKLVPVAVGDRIFTADRKGYLRAIDATTGKRIWE
                     QDTDTAVSGGLGAGDALVLVGTSDGEVLALSQERGEILWKSTVSSEVLASPQAAEGTV
                     VARTLDGRLFGLEATSGARLWVYDRQVPVLTLRGTSAPVVVSGRVIAGFDNGSLVALD
                     LKTGKLIWETPLAQPRGRTELERMVDIDAEPVVFDETIYAATFQGRVAAISLDSGQVD
                     WDRDLSSYAGIGVDPDNVYLTDAQSHVWALDRYSGASVWKQDKLHGRAVTAPVPLGEY
                     IVVGDLEGYLHWMRKEDGRFAARIELDSSPITVPPLAMDHTLVALSSSGTLSAYRLH"
     gene            complement(1578..2234)
                     /locus_tag="VE844_05715"
     CDS             complement(1578..2234)
                     /locus_tag="VE844_05715"
                     /inference="COORDINATES: protein motif:HMM:NF021492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZC00858.1"
                     /translation="MDRYVAEDEQVEALKAWWKENGKAIIAGVIFGLLGLMGWRYWQG
                     SIKVQAEQASTAFQQLLSQVADNKKEAAEQQAKQILDQYEKSPYAAFAALMLAKIAVD
                     KNDLAQAKTHLQWALAHSTEPEIKRVARLRLVRLLLAEGNTDQAQSLLDEKDNMASLP
                     SYHELKGDLLLAQGKLEEARNAYLQALALGGTTGEQSSVVQMKLDELGEASPAPKQAP
                     "
     gene            complement(2244..3494)
                     /gene="hisS"
                     /locus_tag="VE844_05720"
     CDS             complement(2244..3494)
                     /gene="hisS"
                     /locus_tag="VE844_05720"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012638607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004821 - histidine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006427 - histidyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HZC00859.1"
                     /translation="MPADTPCWQYLEQAIHRVLDAYGYQEIRLPVLEYTSLFERSIGD
                     HTDIVEKEMYTFLDRNGDSLSLRPEGTAGCVRAGLENGLLYNPIQRLWYIGPMFRHER
                     PQKGRYRQFHQIGAEAFGMASPDIDAELILITARIWRALGLTDHLRLEINSLGTKESR
                     AVYRERLIDHFSEHQEALDEDSRRRLAVNPLRILDSKDPALQELIAAAPTLIKHLDKE
                     SAAHFDTLRSMLETAGIDYEVNPRLVRGLDYYTKTVFEWITDRLGAQGTVCAGGRYDG
                     LVEQMGGKPVPGVGFAIGLERVAAMLERGDNRFAKPPHIYLIASGEGSSLQALKLAEC
                     LRDALPGLRLLAHCGGGGFKNQFKHADKSKAKLALVLGPDELAQGAVGVKFLDEDLGQ
                     VTILQEDLVAYLRQALGDRGVFLD"
BASE COUNT          734 a         1072 c          943 g          747 t
ORIGIN      
        1 agccacggcg attgccggat cgcggccttc ggttttattg actgccagct gtataggttt
       61 atcgaggctc cgcaaccggc tggcgatgat ttcatcctga ggggtaaatc cttcctggcc
      121 atcaaccaag aaaataaccg catcggcctc tcgggccgcc tgcagggatt gctgtgtgac
      181 caactccgcg aggccctttt gaccctggta aagcccaccc gtatcgatga ccacatacga
      241 tcggtcatcg gtcttgccga tcccatagag acgatcgcgc gtcaggccgg gttcttctgc
      301 caccagggcg tcacggcctt gggtgagccg gttgaagagg gtcgatttac ccacgttagg
      361 acgccccagg atggcgataa tcggtttcat ttgataaaaa tctttttagt ggaggcggta
      421 ggcgctcagg gttcctgagg aactcaaggc caccagggta tgatccatcg ccaatggcgg
      481 gacggtgatc gggctgctat cgagctcgat ccgggcggcg aaccgaccat cttccttgcg
      541 catccagtgc aagtaaccct caagatcacc gaccacaata tactccccga gcggcacggg
      601 ggctgtcaca gcacggccat gcagtttatc ctgtttccag acagaggcgc ccgagtagcg
      661 atcgagcgcc catacatggc tctgtgcatc ggttaaatag acattatctg gatctacgcc
      721 aatcccggca taggatgaga gatcgcgatc ccagtcgact tgtcccgaat ccagggaaat
      781 agcggcgaca cggccttgaa aggtagcggc atagatagtc tcatcgaata ctacaggctc
      841 agcatcgata tccaccatgc gttcgagctc agtgcgtccc cgcggctggg ccaggggcgt
      901 ctcccagatc aatttgccgg tcttgagatc cagggccacg aggctgccat tgtcaaaacc
      961 ggcgatcacc ctgccgctaa ccactaccgg cgcgctggtg ccgcgcagcg tcagcaccgg
     1021 gacctgacga tcatacaccc aaagcctcgc gccactcgta gcctcaaggc cgaacaacct
     1081 gccatccagg gtgcgcgcta ctacggtgcc ctcggccgcc tgcggggaag ccaggacctc
     1141 acttgagacg gtagatttcc acaggatctc cccccgctcc tgcgacaagg ccagcacctc
     1201 cccatcgctg gtgccaacca gcacaagcgc atcgccagcc ccgagccccc cggaaaccgc
     1261 cgtgtcggta tcttgttccc agatccgctt gcccgtggtc gcatcgatag cacggagata
     1321 tcccttgcga tcagcggtaa agatccgatc gccgaccgct accgggacca gttttagatg
     1381 ctgcttaggc cctccgctac ccacatcctc cgaccacagg gcctcgatcg taagcgtggg
     1441 cttgagctca acgagcggtg ccggtggttc agccggctct tcacccgcca cccattcggt
     1501 catgtaatca gtgacccccc cacagcccga gaaggtggtc agcaccaggc tgatcaggca
     1561 aggaaggatg cgcccgttca tggagcctgc ttgggtgcgg ggcttgcctc gccaagctca
     1621 tccagcttca tttgcacgac agacgactgc tcacctgtcg tcccgcccag cgccaaggcc
     1681 tgtaaatagg cattacgcgc ctcttcaagc ttcccctggg cgagcagtag atcgcccttc
     1741 aattcatgat aagaaggcag cgaggccata ttatcctttt catcgagtaa ggattgggcc
     1801 tggtcggtgt tgccctcggc gagcagcaaa cgcaccagac gtagacgcgc tacccgtttg
     1861 atctcgggtt ccgtggaatg ggctaatgcc cactgcaggt gcgtcttggc ttgggcgaga
     1921 tcgttcttgt ccacagcgat cttggccaac ataagggcgg caaaggccgc atagggactt
     1981 ttttcatact gatcgaggat ctgcttggcc tgctgctcgg cggcttcctt cttgttatcg
     2041 gctacttggg agagcagctg ttggaacgct gtcgatgcct gttctgcttg gacctttata
     2101 ctgccttgcc agtatcgcca gcccatcaga cccagcaagc cgaagataac acctgcgata
     2161 atggccttac cattctcttt ccaccacgct ttcagagctt cgacttgctc gtcttcggct
     2221 acatatctat ccacgataat ctcctaatct agaaaaacac cgcgatcccc caatgcctgg
     2281 cgcaagtagg cgactagatc ttcttggaga atggttacct ggccgaggtc ctcgtctaag
     2341 aattttactc cgacggcacc ctgggcaagc tcatctgggc ccaacacaag cgccaatttg
     2401 gccttgcttt tatcggcgtg tttgaattgg tttttgaaac cacccccgcc gcaatgggcc
     2461 aagagacgta atcctggcaa ggcgtctcgc aggcactcgg caagttttaa tgcttgcagg
     2521 ctactcccct cgccagaggc gataagatag atatgcggtg gtttagcaaa cctattatcg
     2581 ccacgttcga gcatagctgc cacgcgctcg agccctatgg caaaacctac gccaggcacc
     2641 ggtttaccgc ccatttgttc caccagccca tcgtagcggc caccggcaca tacagtgccc
     2701 tgtgctccca aacgatcggt gatccactcg aataccgtct tggtgtaata atcgagtcca
     2761 cggaccaggc gcggattcac ctcataatcg atacccgccg tctctaacat cgaccgcagg
     2821 gtatcaaagt gtgctgccga ctctttgtcg aggtgtttga tcagtgtggg tgccgcggcg
     2881 atcagctctt gcaaggccgg atctttactg tcgaggatcc gcaagggatt gaccgccagg
     2941 cgtcggcggc tgtcctcgtc cagcgcctct tgatgttcgg aaaaatgatc gatgagccgc
     3001 tcacggtaca ccgcccggct ttcctttgtg cccagagaat tgatctcaag tcggagatga
     3061 tcggtcaacc caagcgcacg ccagatccgg gccgttatca agataagctc ggcatcgata
     3121 tcagggctgg ccatcccaaa ggcctcagcg ccgatctggt ggaactgccg gtagcggcct
     3181 ttctggggcc gttcgtgacg gaacatgggg cctatatacc agagcctttg gatcgggttg
     3241 tacagcaggc cattctcaag acccgcgcgc acacaccctg ccgtgccctc agggcgtaag
     3301 ctcaggctat cgccgttgcg gtccaggaag gtatacatct ccttctcgac aatatcggtg
     3361 tgatcgccga tggaacgctc aaagaggctg gtatattcta agacaggcaa gcggatctct
     3421 tggtaaccat aggcatcgag gaccctgtgg atagcctgtt caagatactg ccagcacggc
     3481 gtgtcagccg gcagaa
//
LOCUS       DASQSL010000562         1085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_18571, whole genome shotgun sequence.
ACCESSION   DASQSL010000562 DASQSL010000000
VERSION     DASQSL010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18571"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..321
                     /locus_tag="VE844_05725"
     CDS             <1..321
                     /locus_tag="VE844_05725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00860.1"
                     /translation="GYGDRALPLYWCTQAGEGNIGYEAQEGLLDQVRAWLPPAAKVML
                     LGDRFFGSPDLIRYCQRHGWGYRLRLKGNLLVDTGRVSTTTGELAQGVPPRGLYLTDV
                     LLTG"
     gene            385..759
                     /locus_tag="VE844_05730"
     CDS             385..759
                     /locus_tag="VE844_05730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00861.1"
                     /translation="MDAVPTRARVVDYGTRWPIESLFSDFKTRGFNLEQSHLVYAERL
                     ARLILILSLALHWAARSGRDDALKHPLPVEKKAQSTLDDIAPVVRRAARSQLSWFKRG
                     LRLLRYLAQRLMPLPRFYECPA"
     gene            complement(858..>1085)
                     /locus_tag="VE844_05735"
     CDS             complement(858..>1085)
                     /locus_tag="VE844_05735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014652242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginase family protein"
                     /protein_id="HZC00862.1"
                     /translation="FDVDTLDPGDAPGSGTLVRGGLSYREAHLAMEKIADAGGTRSLE
                     VVEINTALDVNNRTAELGVELILSALGKTIL"
BASE COUNT          235 a          316 c          299 g          235 t
ORIGIN      
        1 ggctatgggg atcgcgcatt gcccttgtat tggtgtaccc aagcgggaga agggaacata
       61 ggctatgagg cgcaagaggg gttgttagac caggtaaggg cgtggttacc gcccgcagcc
      121 aaggtcatgt tgttggggga ccggttcttt ggttcacccg atctcatccg ctattgccag
      181 cgacacggct ggggctatcg gttacggctt aaaggcaatc tcttggtgga tacgggccgg
      241 gtgagcacca ccacgggtga gttagcacag ggggtccccc cacgcgggct ctacctgacc
      301 gatgtgctgc tcaccggcta agaagtccca accaacctgg gcatactgca cgaagcgggg
      361 catgaggaag cgtggatcat cgccatggac gccgtaccca cccgtgcacg ggtggtggac
      421 tatggaacgc ggtggcccat tgaaagctta ttcagcgatt ttaaaacccg ggggtttaac
      481 ctcgaacaaa gccatctcgt ctatgccgag cgtctcgcac ggttgatcct gattctaagc
      541 ctggcgctgc attgggccgc tcgttcaggc cgggatgatg ccctaaaaca tcccctaccg
      601 gttgaaaaaa aagcccaatc caccctcgac gacatcgcac cagtggtgcg ccgagccgca
      661 cgtagccaac tttcttggtt caagcgcggg ttacggttgc tgcgctatct tgctcagcgc
      721 ttgatgcctt taccccgctt ctatgagtgc cctgcatgaa actgataggt ggtaaggaat
      781 tgctgcatga cgacgctcat cagcaacaaa cattttcgtt atccgaaatt cttgcaacac
      841 atccagttta tcggacatta aagaatcgtc tttcccaacg ccgacaggat caattcaaca
      901 cccagctccg ccgtgcgatt attcacatcc agcgcggtat taatctcgac tacttccagc
      961 gagcgcgttc cgccagcgtc ggcaatcttt tccattgcca gatgcgcctc gcggtaactg
     1021 agcccgccgc gtaccaacgt tcccgaaccc ggcgcgtcgc cgggatcaag cgtgtcaacg
     1081 tcgaa
//
LOCUS       DASQSL010000563         1038 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_45474, whole genome shotgun sequence.
ACCESSION   DASQSL010000563 DASQSL010000000
VERSION     DASQSL010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45474"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            127..576
                     /locus_tag="VE844_05740"
     CDS             127..576
                     /locus_tag="VE844_05740"
                     /inference="COORDINATES: protein motif:HMM:NF025469.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4277 domain-containing protein"
                     /protein_id="HZC00863.1"
                     /translation="MNEIPNIIMERVDDIPLLLQQMQQMDLPTLIDTHFPAHGNWYGL
                     SLGWVSTIWLSSILSRGAHRLSHVEPWVANRLFTLQTVSGQDVERLDFTDDRLDIVLR
                     RLSDDARWAQFESGLNQPTVRVYDLSTERIHVDSTTASAYASVSEGG"
     gene            613..>1038
                     /locus_tag="VE844_05745"
     CDS             613..>1038
                     /locus_tag="VE844_05745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00864.1"
                     /translation="MPQVKVMQAVLDPLGIPLATDVVSGERADDPLSVPCIARVQQRL
                     GRSGLLFVGDCKMAAHDTGAFIVLAGDYYLCPLPQGQLGEGELDEALERVWRGEQALN
                     SVFREREPGKPEFIAQGYEYEVPLSVEVEGKRREWTERRL"
BASE COUNT          199 a          273 c          335 g          231 t
ORIGIN      
        1 cagagcaacc agattaatgc cctatgaggc tctgtttgca gtgtgcaaga ctaggcccta
       61 gaaggcgtgt tactgccggt tcgcccaaat ttggaggtaa atcccagatt gcgttaagct
      121 ctgtgtatga atgagatacc caacatcatc atggagcgcg tcgacgacat tcctctgttg
      181 ctccaacaga tgcagcagat ggacctgccg acgttgattg acacccattt tcccgcccac
      241 ggcaactggt atggactcag tctgggctgg gtcagcacca tctggctcag ctccattttg
      301 tcccgaggtg ctcaccgtct gtcccatgtc gagccctggg tggctaatcg acttttcacc
      361 ctccagacgg tgagtggaca agacgtcgag cggctcgatt tcacggacga tcggcttgac
      421 attgtcctgc ggcggttgag tgacgatgcc cgatgggcgc agttcgaaag cggcctgaat
      481 cagcctaccg tgcgcgtgta cgacttgagc accgagcgca ttcacgtcga tagcacgacg
      541 gcgagtgcct atgcgagtgt gagtgaaggc gggtgatttc agtttggccc tagcaaggat
      601 taccgtccgg atttgccgca agtcaaagtg atgcaggcgg ttctcgatcc cttgggaata
      661 cccttggcca ccgatgtggt ctcgggtgag cgcgccgatg atcccctgtc tgtgccgtgt
      721 atcgcgcgag tgcagcagag gttgggccgc agtggcttgt tgtttgtcgg cgactgcaag
      781 atggcggctc acgacacggg cgcctttatc gtgttggcag gtgactatta tttgtgcccg
      841 ctgcctcagg ggcaactggg cgagggcgag ctcgatgagg ctctggagcg ggtgtggcgt
      901 ggtgagcaag ccctgaactc ggtctttcga gagcgagaac ctggaaagcc cgagttcatt
      961 gcccagggct atgagtacga ggtgcccctg agcgtggagg tcgaggggaa gcggcgggaa
     1021 tggacggagc gccgcctg
//
LOCUS       DASQSL010000564         1029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_29890, whole genome shotgun sequence.
ACCESSION   DASQSL010000564 DASQSL010000000
VERSION     DASQSL010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29890"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1029
                     /locus_tag="VE844_05750"
     CDS             <1..>1029
                     /locus_tag="VE844_05750"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HZC00865.1"
                     /translation="SVYLNPNEFSKHPEALQHLARVLALKGATILEKMQSDRQFVWLK
                     RQVPPEESATLRSLGLKGIGFVTESQRFYPKRALAGQVIGFVGTDETGLEGVEHSHES
                     TLAGEAVRVMLDRDARGRSIALRSETLGQLPQGQDLVLTLDERIQFIAERELRAQVRR
                     TGARGGVVVVMDPFTGEILALANEAVFDPTHFREASPKIWRERSITDTFEPGSTLKAL
                     LTAAALEERLVRPDDMFFGEQGSIQVAHSVIRDHEKFGWLTFREVIEKSSNVGTIKVG
                     QRLGKERYYDYLVRFGVGSQTGVDFPGEASGVLRPPQQWSEVSLASLSIGQELAVTPL
                     QLVTAFSAL"
BASE COUNT          210 a          286 c          334 g          199 t
ORIGIN      
        1 tcggtgtacc tcaatccgaa tgaattttca aagcatcccg aggcgttgca gcacctcgca
       61 cgtgtattgg cgctcaaagg agccaccatc ctggagaaaa tgcaaagcga ccgccagttc
      121 gtctggctca aacgccaagt accccctgag gaatcggcga ctctgcggtc gttgggtctg
      181 aaggggattg ggttcgtgac cgagagccaa cgcttctatc cgaaacgagc cctggcaggg
      241 caggtgatcg gctttgtggg caccgacgaa accggcctgg aaggggttga gcacagccac
      301 gagagcacgc tggcggggga agctgtgcga gtgatgctag accgggacgc gcgaggtcgc
      361 tccatcgcgc tgcggtctga gacgttgggg cagcttcccc aggggcaaga cttggtgtta
      421 acgctcgacg aacgcatcca attcattgcc gagcgagaat tgcgcgcgca agtccgccgg
      481 acgggtgcgc ggggtggggt cgtggtggtc atggacccgt tcacgggaga gattctagcc
      541 ctcgccaatg aggcggtatt cgaccccacg cattttcgcg aggcatcacc gaaaatttgg
      601 cgcgagcgta gcatcaccga tacgtttgaa ccgggctcta ccctcaaggc tctgctcacc
      661 gcggccgcgt tggaagaacg cctggtgcgg ccggacgata tgttcttcgg tgagcaaggc
      721 agcatacagg tggcgcactc cgtcatccga gaccacgaga aattcggctg gttgaccttt
      781 cgcgaggtga tcgaaaaatc cagcaatgtg gggacgatta aagtagggca gcgcctggga
      841 aaggagcgct actacgatta tctggtgcgg ttcggtgtcg ggagtcagac cggtgtggac
      901 ttcccaggcg aagcgtcagg cgtcttgcga cccccgcaac agtggtctga ggtgtctctg
      961 gcttcgctgt cgataggcca ggaattagcc gtgacaccac tgcagctcgt caccgccttt
     1021 tccgccctg
//
LOCUS       DASQSL010000565         1012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_4823, whole genome shotgun sequence.
ACCESSION   DASQSL010000565 DASQSL010000000
VERSION     DASQSL010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4823"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..888)
                     /locus_tag="VE844_05755"
     CDS             complement(<1..888)
                     /locus_tag="VE844_05755"
                     /inference="COORDINATES: protein motif:HMM:NF025079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4158 domain-containing protein"
                     /protein_id="HZC00866.1"
                     /translation="MATTVADYDWRGRTGARYRGRLRTALGIRPATAEDFKAVEEWLR
                     QDVVPWDHDARHLQDAMHAWYRSRLIEPPTEGRIARLVRSAVRTHETAICDGIAAKLL
                     PSTRQALDALIDSSLASDNQDADEGSDRRSTPFSALKTDPGRVSLQSVLRELEKLCQI
                     ETLELPDHLFAAIQPKILRQYRLRAAVEPPREVRRHPEPIRYTTLAAFCWQRRQEIID
                     GLVDLLIQIVHRISVRAEKKVVDELLGDLQKVRGKTTLLFKMAEAALEHPTGVIREVL
                     YPVVSEQTLSDLVKEYRSNG"
BASE COUNT          203 a          316 c          286 g          207 t
ORIGIN      
        1 accgttggag cgatactctt tgacgaggtc cgacagcgtc tgctcgctta caaccggata
       61 gagcacctcc cggatgaccc cggtggggtg ttccagggca gcttccgcca ttttaaacag
      121 gagggtggtc ttgccacgga ccttttggag gtcgcccaat aactcatcga ctaccttttt
      181 ctctgcccgc accgagatgc gatgcacgat ctggataagg aggtccacca gaccatcaat
      241 gatctcttgg cgccgctgcc agcagaaggc tgcaagcgtg gtataccgaa ttggctcggg
      301 gtgtcgacgc acctcacgag gcggctcgac cgcagcacgg aggcgatatt ggcgaaggat
      361 tttcggctgg atcgctgcga agagatggtc gggtaactcc agcgtctcaa tctggcacag
      421 cttctccaac tcacgcagca cactctgaag actgacacgc cccggatccg tcttcagggc
      481 gctgaaaggg gtactgcgcc ggtctgaccc ctcgtctgca tcctgattgt cgcttgcgag
      541 ggaagaatcg atcagggcat ccagcgcctg ccgtgtactt ggtagcagtt tggcagctat
      601 cccgtcacat atcgcggtct cgtgcgtgcg cacggcggaa cgcacaagac gcgcaatgcg
      661 gccctcggtt ggcggctcga tcagtcgact ccgataccac gcatgcatgg catcctgcaa
      721 atgtcgcgca tcatgatccc acggcactac atcctggcga agccattcct ctacagcctt
      781 gaagtcttcg gccgtagcgg ggcgtatacc tagggcggtt ctcaagcgcc cccggtaccg
      841 tgctcccgtg cggccccgcc aatcataatc cgcgaccgtt gttgccatcc ccctacgatc
      901 cttgcatgga ggtggaacct atgcaacggc actggagcga acaggaactc gaaacctatt
      961 ggtcgttctc ctcagaggag ttaacactca tcccgcaccg cgatgccggc ag
//
LOCUS       DASQSL010000566         1166 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_127614, whole genome shotgun sequence.
ACCESSION   DASQSL010000566 DASQSL010000000
VERSION     DASQSL010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1166
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127614"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1166
                     /locus_tag="VE844_05760"
     CDS             <1..>1166
                     /locus_tag="VE844_05760"
                     /inference="COORDINATES: protein motif:HMM:NF015714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HZC00867.1"
                     /translation="PLALALLAKPALRVPLCFMLGFLWALLRADLVLSRGLPPELEGE
                     TVTLEGRIVGLPRPGSRSLRFELDVSALHGLKRDWPSPGRVRLSWYQHPPELIPGESW
                     RLMVRLKRPYGFRNPGGFDYEAWLFQQKIRATGYVLESAHNTRLAGPHGEWINQWRGQ
                     LARKLADTLGQSPQTGLIVALAMGEQQGIAQDQWRIFSRTGTTHLVAISGQHIGLIAG
                     FAYFLGCGIWSRLGVTLLYLAAPRFGALMALFAAFLYAALAGFSIPIQRALIMVAVVM
                     TGIFISRRTPAFNLLLLALLVVLLLDPVAVMAAGFWLSFASVATILYAMSGRIRTPDR
                     WWRTSGRIHVAVAVGLTPIVLMLFGQNPLLGPLANAVAVPWVSFIVVPLVLLGA"
BASE COUNT          194 a          332 c          354 g          286 t
ORIGIN      
        1 cgcctttagc ccttgccttg ctggccaagc cagccttgcg tgttcccctc tgttttatgc
       61 ttggattcct gtgggcctta ctgagagccg atctggtact gtctcgagga ctgcctcccg
      121 agctcgaggg ggaaaccgtc accctggaag gcaggatcgt aggacttcct cgcccgggga
      181 gtcgtagcct gcgtttcgag ctggatgtga gcgcgctcca tgggcttaaa cgtgactggc
      241 cttcacccgg acgcgtgcga ctcagttggt accagcatcc acccgaattg atcccggggg
      301 aatcctggcg gcttatggta cggcttaagc gtccttacgg atttcgcaat ccgggagggt
      361 ttgattatga agcctggctg ttccagcaga agatccgggc caccggttat gtgctcgaga
      421 gtgctcacaa tacccgcctc gcaggaccgc atggcgagtg gataaaccag tggcgagggc
      481 agcttgcgcg caaacttgcc gataccttgg ggcagagtcc ccaaacaggg ctcatcgtgg
      541 ccctcgctat gggagaacag caggggatcg cccaggacca atggcgcatc ttcagccgta
      601 ccggcactac ccatctagtg gcgatctcag gccaacacat cggacttatc gcgggttttg
      661 cttatttcct ggggtgcggc atatggtcgc ggttaggggt tacgctgtta tatctagcag
      721 cacccaggtt tggggccctg atggcgcttt ttgccgcttt cctctatgcc gccctggccg
      781 gtttctcgat ccccatccaa cgggctttga tcatggtcgc tgtggtcatg accggtatat
      841 ttataagccg gaggacgccg gcgtttaacc tgttactgct cgccttatta gtggtgctcc
      901 ttcttgatcc ggtggcggtg atggcggcag gcttctggct gtcctttgcc tcggtggcga
      961 ccatcctcta tgccatgtca ggcaggatcc gaacccccga taggtggtgg agaacctccg
     1021 gcaggatcca tgtcgcagtg gccgttgggc tgacacccat tgtactcatg ttgtttgggc
     1081 aaaatcccct actggggccg ctagcaaacg cggtggcggt tccttgggta agctttatcg
     1141 tggtgccgct ggtgctgctt ggcgct
//
LOCUS       DASQSL010000567         1029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_4830, whole genome shotgun sequence.
ACCESSION   DASQSL010000567 DASQSL010000000
VERSION     DASQSL010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4830"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..333
                     /locus_tag="VE844_05765"
     CDS             <1..333
                     /locus_tag="VE844_05765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00868.1"
                     /translation="IADLSYREDAIKSAILARDGISAFCLGYNCENEVEDDLAVNGFR
                     YLPFVHLAPQGVRTYLFKILYTRDEAAEIMGDHFAPEVVEAWIQQLPVGNLTDIFGVD
                     EDIESTDF"
     gene            344..922
                     /locus_tag="VE844_05770"
     CDS             344..922
                     /locus_tag="VE844_05770"
                     /inference="COORDINATES: protein motif:HMM:NF012832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00869.1"
                     /translation="METGQTMSRKLLVLVGQPGVGKKFCTLRLNGNHPMDVEIVKTLT
                     TQPQRQIYDSLFYKTVDPEAFQKCMAAGDLLEHDAFAGHWYGLERTETEAVLKQKHGV
                     VSSTPSGVETLRSSGLPLIIAYLYPASKSLIEDNLRKKQEDPERLRLLQQSAAVFERL
                     PENAYDIAVAVKSLVDAERELEEKLATYMELH"
BASE COUNT          237 a          269 c          304 g          219 t
ORIGIN      
        1 atcgccgacc tgagctaccg tgaggatgcg atcaagtccg caattctggc ccgcgacggg
       61 atctcggcct tttgtctggg ctataattgt gaaaacgagg tggaagatga cctcgcagtg
      121 aacggtttcc gctatctacc atttgtgcat ctggcaccac agggcgtgcg cacgtatctg
      181 tttaagatcc tctatacgcg agatgaggcg gctgaaatca tgggagacca ctttgcgccc
      241 gaagtggttg aagcatggat ccaacaattg ccggtcggta acctcacaga catctttggg
      301 gtcgacgagg atatcgaaag cactgacttc taagaggaga gcgatggaga ccggtcagac
      361 gatgagccgc aagctcctcg tgctcgttgg ccagccaggg gtcgggaaga agttttgtac
      421 actgcggctc aatggcaatc atccgatgga tgtggaaatt gtcaagacgc tgacgacaca
      481 accacagcgg cagatctatg actctctgtt ctacaagacg gtggacccgg aggcattcca
      541 aaagtgtatg gcggcgggtg acttgctgga acatgatgca ttcgccggcc actggtacgg
      601 gctggagcgc actgaaacgg aggcagtgtt gaagcagaag catggtgtgg tctcgtccac
      661 gccttctggg gtggaaaccc tccggagcag tggactgccc cttatcatcg cctatctgta
      721 tccggcctcg aaatccctca tcgaggacaa tctccgcaag aagcaagaag accctgaacg
      781 cttgaggttg ttgcagcagt ccgcagccgt gttcgagcgc ttaccggaga atgcctacga
      841 tattgctgtt gcggtgaagt cgttggtgga cgccgagcgc gagctggaag agaagttggc
      901 tacctatatg gaactgcact gagaggcgct cgagccaacc caacccttga catcccatgc
      961 ctgcctgttc atactgtcag cgcgacgctt aaagcccctc tgcagaggct cttggccgca
     1021 taaggagct
//
LOCUS       DASQSL010000568         1076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_29908, whole genome shotgun sequence.
ACCESSION   DASQSL010000568 DASQSL010000000
VERSION     DASQSL010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29908"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1076
                     /locus_tag="VE844_05775"
     CDS             <1..>1076
                     /locus_tag="VE844_05775"
                     /inference="COORDINATES: protein motif:HMM:NF014581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /protein_id="HZC00870.1"
                     /translation="PERRELGNILVDAPTRGGKGLLAISQLLSWPYSSVIMDIKGELY
                     EATAAYLRQRGHKIMVVDPRGVGNQYDPLRGKSTERELYTVAKYLLYTEGERDPIFIE
                     RGIKMLTQLFLAGREENRQAGYDKYRLLPYALQLMNVPINQIAAHVHAVSPELATTFL
                     SGAYNAEKDYDEKKFLTSAWESADARLYSIRSDEILRCFDGSDFTGEEMITSKQPITV
                     YLRLPESQLLALVPVIRLLFQSLINACTDTYDNTPGRTAAEKGCYPVLFLIDEAGCAA
                     IPKLYEYAVTAVGRQISLWIAMQSIVQLEAIYGWAHAQELLENLDTKIFYRQGHATAK
                     YLEEELDKKSEFSRSQSSREGGYET"
BASE COUNT          250 a          312 c          293 g          221 t
ORIGIN      
        1 ccggagcggc gggaactcgg caacatctta gtggatgcgc cgaccagggg agggaagggg
       61 ctcctcgcga tctcccaact gctctcctgg ccgtattctt cggtcatcat ggatatcaag
      121 ggcgagctct atgaagcgac agcagcgtac cttcgccaac gcggacataa gatcatggtg
      181 gttgacccaa gaggcgttgg caatcagtac gatccgctgc gtggaaaatc gaccgagcgt
      241 gagctctaca cggtggccaa gtacctcctc tatacagaag gggagcggga tccgattttc
      301 atcgagcgtg ggatcaaaat gctcacccaa ctgttcctgg ccggccgtga ggaaaatcgc
      361 caggccgggt atgacaaata ccgcctctta ccctatgcct tacaactgat gaatgtgccc
      421 atcaatcaga tcgcggcgca tgtgcatgcc gtctcgccgg aactggcgac cacattcctc
      481 tccggcgcct acaacgccga gaaggactat gatgagaaaa agtttctcac ctccgcctgg
      541 gagtctgcag acgccagact ctattccatc cgatcagatg aaattctgcg ctgttttgac
      601 ggctcggatt tcaccggtga ggaaatgatc acctcgaaac aacccatcac cgtgtacctt
      661 cgcctcccgg agtcgcaact gttggcgctc gtgccagtga tccgcctgct ctttcaatcc
      721 ctcatcaatg cctgcaccga cacctatgac aacacacctg gacggaccgc tgcggagaaa
      781 ggctgttacc cggtactgtt tctcattgat gaggccggat gcgccgccat tcccaagctc
      841 tacgaatacg ccgtcacggc ggtgggtcga cagatcagtc tctggattgc catgcaatcc
      901 attgttcagc tggaggcgat ctatgggtgg gcccatgccc aggagcttct ggaaaatctc
      961 gacacgaaaa ttttctatcg gcaaggccat gccaccgcga agtatctgga ggaggagctg
     1021 gacaaaaaat cggagttctc ccgctcacag agtagccggg aggggggata cgaaac
//
LOCUS       DASQSL010000569         2719 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_194431, whole genome shotgun sequence.
ACCESSION   DASQSL010000569 DASQSL010000000
VERSION     DASQSL010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2719
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194431"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(52..999)
                     /locus_tag="VE844_05780"
     CDS             complement(52..999)
                     /locus_tag="VE844_05780"
                     /inference="COORDINATES: protein motif:HMM:NF024855.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RodZ domain-containing protein"
                     /protein_id="HZC00871.1"
                     /translation="MPTSETIERELTMGPGKSLQKAREALNLTPEEIAAALHLELDVV
                     DAIESEEYNKLPHVYMRGYIRAYARIVGLDPEPLVEAYNKLAAEAPMIQPWARQSPTP
                     ARSHDRPVKAVTYLVIAILGALLFIWWQNREAEIIPADLPLTPEEFPSEQSSFPQSPA
                     PAPNNGSSPSNEAVLPALPPTEEAKPAGPDATVPADTLTPSAPPAPEAVPGDATVGSA
                     PTVAQVPDPSQDKSRSLVLKPSQDSWMGIVDAKGAQLYHGLAKGGQTVSLQGEPPFKV
                     TLGNAQDINVLYNGKPMDIGAFSRGGVARFKVDDNGLYR"
     gene            complement(989..1762)
                     /gene="pilW"
                     /locus_tag="VE844_05785"
     CDS             complement(989..1762)
                     /gene="pilW"
                     /locus_tag="VE844_05785"
                     /inference="COORDINATES: protein motif:HMM:TIGR02521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis/stability protein PilW"
                     /protein_id="HZC00872.1"
                     /translation="MIAYKSAWFCSTVLIILAGCASTPVKDQEAEGSPADIYIQLGVA
                     HMQEGNYETAVVKLQKALAIDPKYPSAHSVLGLAYSQLGNKSRAEQHFKEALVLAPND
                     SGILNNYGQFLCQLGRPQEAEQMFTKAVQNPLYAAPENVHTNAGLCAARNKDFARAEQ
                     HLQKALRINRRLPIALLELAKLSYQLKRYLPARDYLERYTGVAPHTPQSLQLGIQIER
                     ELGNDNAVETYSQILKSKFPRSNESRQFMEGEENGQFAY"
     gene            complement(1759..>2719)
                     /gene="rlmN"
                     /locus_tag="VE844_05790"
     CDS             complement(1759..>2719)
                     /gene="rlmN"
                     /locus_tag="VE844_05790"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HZC00873.1"
                     /translation="MTNLSRSLREQLKAAACIEAPQVVTEQIARDGTRKWLLQLAGGN
                     CIETVFIPEPARGTLCVSSQIGCPLACSFCATGKQGFNRNLSVGEIIGQIWIAARALG
                     QHPKGPRRITNVVMMGMGEPLLNLDNVIGAIRIMLDDFAYGLSRRRVTLSTTGIIPKI
                     DRLKEECPVSLAVSLHAPTDALRNQLVPINRSYPLDEVLAACWRYAKATDSRITFEYV
                     MLEGINDSLECAAQLIKRLRGRPAKVNLIPFNPFPYTCYTRSEPEVIDRFRERLLAAG
                     IMTITRKTRGDDIDAACGQLVGKVAPRRAGHLHPITQGRGALL"
BASE COUNT          571 a          781 c          755 g          612 t
ORIGIN      
        1 agtggacacg ggaagtttcc ccagccgcca ggaaagatct aactacccgc cctaccgata
       61 caaaccattg tcgtccactt taaaccgggc caccccaccg cgagaaaatg cgcctatatc
      121 catcggcttt ccgttataca acacattgat atcttgggca ttgccaaggg taaccttgaa
      181 gggcggctca ccctgcagcg atacggtttg ccctcctttg gcaaggccgt gatagagctg
      241 ggcgcctttg gcgtcgacga tccccatcca agaatcttgg ctaggcttta acaccaggct
      301 acgggattta tcctgtgacg gatccgggac ctgagccaca gtcggcgcag atcccacggt
      361 ggcatcaccc gggaccgctt cgggtgcagg cggcgcagac ggcgtgaggg tgtctgccgg
      421 tacagtagcg tctggaccgg ccggcttagc ctcctccgtt ggaggtagtg caggcaaaac
      481 cgcttcattg ctcggggatg aaccattatt gggcgcgggg gccggcgact ggggaaagct
      541 cgactgttca gaggggaact cctccggcgt taaaggcaaa tcagccggta ttatctcagc
      601 ttcgcggttt tgccaccaga taaacagaag tgccccaagg atcgcaatca ccaggtacgt
      661 cactgccttt accggtcggt catgactgcg cgccggtgtg ggtgactggc gggcccaagg
      721 ctggatcatg ggggcttctg cggcaagctt attgtaggct tcgaccagtg gttcgggatc
      781 gagccctacg atccgcgcat aggcgcgaat gtatcctcgc atatagacgt gcggcagttt
      841 gttatactcc tccgactcga tggcatcgac tacatccagc tccagatgta gagccgccgc
      901 tatctcctcg ggtgtaagat tgagcgcctc ccgggccttt tgcagactct tgccgggccc
      961 catcgttagt tcccgctcaa tagtttcact agtaggcaaa ttggccattc tcctcccctt
     1021 ccatgaattg ccggctttcg ttggaacgcg ggaactttga tttcaggatc tgggaatagg
     1081 tctccacggc attgtcattg cctaattccc gttcgatctg gatcccgagc tggagactct
     1141 gcggcgtgtg gggagccacc ccggtatagc gctctagata atcacgcgcg ggcaagtaac
     1201 gcttaagctg gtaacttagt ttcgccagtt ccaaaagcgc gatgggcaat cttcgattga
     1261 tcctcagtgc cttctgcaag tgctgttcgg cacgggcaaa gtccttattt cgcgctgcgc
     1321 acaacccggc attagtgtgc acattctcag gtgctgcata gaggggattc tgcacggctt
     1381 tagtaaacat ctgctcggcc tcctgagggc gtccaagctg acagaggaac tggccataat
     1441 tgttaaggat ccccgagtca ttgggggcaa gcacaagcgc ttccttaaaa tgctgttcgg
     1501 cccgagattt atttccaagc tggctgtagg cgagtcctaa gacgctatga gcgctcggat
     1561 acttcggatc gatggcaagc gccttttgca atttaacaac cgccgtctca tagttaccct
     1621 cctgcatatg ggcaacgccc aactggatat agatatccgc tggactgccc tcggcctctt
     1681 gatctttgac cggcgttgag gcacatcctg ccaggattat tagaaccgta ctgcaaaacc
     1741 aagctgattt ataagcgatc atagtagggc ccccctccct tgagtgatag ggtgtagatg
     1801 tccggcgcgg cgtggcgcta ccttacccac caattggccg caggcggcat cgatatcgtc
     1861 tccccgggtc ttacgcgtaa tcgtcatgat ccccgccgcc aataagcgtt cgcgaaaccg
     1921 gtcgatgacc tcgggctcgg aacgtgtata acaggtgtaa gggaaggggt taaacgggat
     1981 cagattcacc ttggcgggcc gtccgcgcag ccgtttaata agctgagccg cacactcgag
     2041 gctatcgttg atcccctcca acatgacata ttcaaaggtg atgcggctat ccgtcgcttt
     2101 cgcgtagcgc cagcaggcgg ccagcacctc atcgagcgga tagcttctgt tgatcggaac
     2161 cagctgattg cgcagcgcat cggtgggagc atgcagcgac acagcgagac tcacgggaca
     2221 ctcttctttg agccgatcga tcttgggtat gataccggtg gtgctgagcg tcacccgccg
     2281 gcgcgacaga ccataggcaa agtcatccag catgatccgg atggccccaa tgacattgtc
     2341 gaggttcaac agcggctcgc ccatccccat catcaccacg ttagtgatcc ttcgtgggcc
     2401 tttagggtgc tgtccaaggg cgcgggcggc gatccagatc tgaccgatga tctctccaac
     2461 gctgaggttg cggttaaatc cttgtttgcc ggttgcgcaa aaactacaag ccagcggaca
     2521 accgatctga gaagagacac acaaggtccc ccgagccggt tccgggataa ataccgtctc
     2581 gatacagttc ccccctgcaa gctgcaaaag ccacttgcgg gttccgtccc gggcgatctg
     2641 ttcggtgact acctggggtg cttcgataca ggccgccgct ttcagctgtt cacgtaacga
     2701 tctactcaag ttagtcatg
//
LOCUS       DASQSL010000570         1154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_141699, whole genome shotgun sequence.
ACCESSION   DASQSL010000570 DASQSL010000000
VERSION     DASQSL010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141699"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(405..695)
                     /locus_tag="VE844_05795"
     CDS             complement(405..695)
                     /locus_tag="VE844_05795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00874.1"
                     /translation="MANYGDGARELAKKVREVICEEWEEGAGGSLESAVVHRRLLEEG
                     VEVPDYHMSAILNALRVGGLITVWLRPQRGEEGVRKHGDLLITGLSPELCDS"
BASE COUNT          256 a          338 c          329 g          231 t
ORIGIN      
        1 ggcgagcaat acgatctgtt catcgctccc gatggcagta tgtacacctt cgtccagatc
       61 aatccccccg agtctgtggc gtcggggttt aacctgcggg ggacggccaa gcgagtcgga
      121 gactgaaccg ctaagcgctc cgatacgaaa gctttacacc ggcagggcgg ggaaataggc
      181 gggggcggga ttgtgagccc cgccctgccc attcatgctt gctaattgct tgcagttgcg
      241 aacttccggg aacgtcactt ccacgcagtt gggtgaagct aagggcctat agcgttcgtc
      301 ataacggttg aaccggcatg cgatacccga gatactaaga agagagcgct ggtagccggt
      361 ccacgatcct atccgggtca atactattga ccgccgctgt agggtcagga gtcgcacagc
      421 tcagggctca aacccgttat caggaggtcg ccatgcttgc gcactccctc ctcaccacgc
      481 tgggggcgaa gccaaaccgt tatcagacca cccacccgca aggcgttgag gatcgcgctc
      541 atgtggtagt cggggacctc caccccctcc tccaagagcc gtcggtgaac gacggcgctc
      601 tccaaggagc ctcccgcgcc ttcttcccac tcctcgcaga tgacctcgcg caccttcttg
      661 gccagctctc gagcgccgtc tccgtaatta gccacagaac ataaaataaa gcgcgaggag
      721 ctattggtcc aaactctaga cagaacttct gagaatctct cttctacagc gtattgcagt
      781 gacattgaac cgggtagcgc gatggacgca tgaaggcgta cttggtgcgc aaggcgggag
      841 gcatagttcc cactgccaag cggggaggtc aatagagcgg gacagtgagg ccaacatcac
      901 tgcaatccgc tgtagaaact gtctgaaaag gggtgtgggc gacgctccga gcgtggattt
      961 gggaggtgta cggaaacaaa aatgctggtc tggaggcccg taaggctacc atcgcagact
     1021 cctccgagac ttttcagaca gtttccaggc gaacttcgca gaacgctcca acctgttcat
     1081 gactttgctc cccgtccggc caatcgctac catcaacgct gtggacgagt cgcgcttgct
     1141 agatgaggtt tgcc
//
LOCUS       DASQSL010000571         1749 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_141704, whole genome shotgun sequence.
ACCESSION   DASQSL010000571 DASQSL010000000
VERSION     DASQSL010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1749)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1749)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1749
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141704"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(61..918)
                     /locus_tag="VE844_05800"
     CDS             complement(61..918)
                     /locus_tag="VE844_05800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00875.1"
                     /translation="MKQNVSFFAGFIPSVDVKAVKAKARAYWFRDRQNAEQAQTMLQA
                     LWHEALTQSGHVRKYFDVLLDDDRQRLPWNIRQALVHVHEHGSTLFLHVASFLCRGVG
                     VPDKALSLHAKAVSCFNKGKAAKGLQFGRAFQLGRLGGNFLLVGACTSIRMEDKAAVR
                     PMIEAHQRLFGVGVLTSAGTDKGYYSGANRKYLGSVEGLKECCLQPPGLDTRTLSESD
                     AEPHARLVDRRAGIEPLIGHAKHGGQLGQSRMKTDDTTLAVGYAAIGGFNLRQLIRHL
                     LGKDIKPMG"
     gene            complement(919..1338)
                     /locus_tag="VE844_05805"
     CDS             complement(919..1338)
                     /locus_tag="VE844_05805"
                     /inference="COORDINATES: protein motif:HMM:NF017416.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00876.1"
                     /translation="MVLPDLKRTTAKGQWWLGRKLRLRIQLGALLLQWLYHLTDRQVE
                     WAIKDHAAYQLFCGQGLVNPWYVPDHTKIEECRSRLSPETQRQIANVVAVWATELGLA
                     DPSAMDLDSTVQEANIAYPSDAHLMVKMVLLVNNVWT"
BASE COUNT          363 a          484 c          518 g          384 t
ORIGIN      
        1 atcttcagga cttagaacag ggcgcccttt ccagacttcc tgcctctgtc ctacgctact
       61 ttatcccatc ggtttgatgt ccttgcctaa caggtggcgt atgagttgcc ggaggttgaa
      121 gcccccaatc gcagcatagc ctactgccag agtggtgtcg tcggttttca tgcggctctg
      181 accgagctgg cctccgtgtt tggcatggcc gattaagggt tcgatcccag cgcggcggtc
      241 tacaaggcgg gcgtggggct ccgcgtcact ctccgacagc gtgcgggtat ccagcccagg
      301 tggctggagg caacattcct tcagcccttc caccgagccc agatactttc gattggctcc
      361 gctgtaatag cctttgtccg tcccggccga ggtcaagaca cctacgccaa aaagccgctg
      421 atgtgcttcg atcatcgggc ggacggcagc tttgtcttcc atgcggatcg acgtacacgc
      481 accgacgagg aggaaattgc ctccaagacg accgagctga aaggcacgcc caaactgtaa
      541 ccccttggcg gccttgccct tgttgaagca gctcacagcc ttggcgtgca aggataacgc
      601 tttgtctggc acgcccactc cacggcacag gaagctcgcc acatggagaa agagagtgga
      661 gccgtgctcg tgaacgtgga ccaacgcctg acggatgttc cagggcagac gttggcgatc
      721 atcgtcgagc aggacatcga aatacttcct gacgtggcca ctctgggtca aggcttcgtg
      781 ccagagggct tgcaacatgg tctgtgcttg ctcagcgttc tgacgatcgc gaaaccagta
      841 ggctcgggcc ttcgctttga ccgctttgac atcgacgctc gggataaagc cggcaaagaa
      901 cgacacgttc tgtttcatct acgtccagac gttattgacc aggaggacca ttttcaccat
      961 caggtgggca tcggaaggat aggcgatgtt cgcttcctgg acagtggaat caagatccat
     1021 cgctgatgga tctgccaaac ccagctccgt ggcccagacg gcgactacat tggcaatctg
     1081 gcgttgcgtt tctggagaga gccgcgagcg acactcttcg atcttggtgt ggtcgggaac
     1141 gtaccaggga ttcacaagac cctgcccgca gaagagttgg taggcggcat ggtccttgat
     1201 ggcccattcg acctggcggt cggtgaggtg gtaaagccac tggaggagca aggcccccag
     1261 ctggatgcgc agccggagtt ttctgccgag ccaccattgg cccttggccg tggtgcgttt
     1321 caggtcgggc aggaccatag cggcgagggc ctgccaaggg atgacctagg ccagctggat
     1381 cagcggatgt gtgggtgaga cagcgatggt cactggatac ccgcagcagg gggtatcaag
     1441 cccggagaaa cagatgctca tggggaggcc ttcgcgtttg cctaggttgt cggtgtgtcg
     1501 gctgctgacg atgaaggcat catacttccc aaacaattgc aatccctctg cgctgtggtt
     1561 tgtgggctat cccaatttcg cgccagcgac tatttatccc gccttacgga tacgcttcga
     1621 tgccggcggc ggatatgggc aagagtgttt ttatcaatgc gctgatagtt gccaaagcga
     1681 gggagggacc caatactttt gtcgagagtt ttgcccaaat aattataaaa ctcacataac
     1741 ccattgaaa
//
LOCUS       DASQSL010000572         1101 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_45523, whole genome shotgun sequence.
ACCESSION   DASQSL010000572 DASQSL010000000
VERSION     DASQSL010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45523"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(210..629)
                     /locus_tag="VE844_05810"
     CDS             complement(210..629)
                     /locus_tag="VE844_05810"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HZC00877.1"
                     /translation="MLEENKALSRRFIEGYVQGDTDIVDELLDPDFVFYDPSSATGEV
                     HAEDMKASIEWIHSAFPDAQVTIEDQVAEGDKVVSRFTVSGTHRGEIMGAAPTGKVVT
                     HTGHQTDRFEGGKIVESWTNWDALGLLQEIGAIHSPE"
     gene            729..>1101
                     /locus_tag="VE844_05815"
     CDS             729..>1101
                     /locus_tag="VE844_05815"
                     /inference="COORDINATES: protein motif:HMM:NF033580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZC00878.1"
                     /translation="MTRLRGMKKSYSTDLTDAEWECIKPYVPAPSKRGRPRIHGSRII
                     LDAIFYVLRSGCPWRLLPRNFPPWCTVYHYFRRWSLDGTWERVNRTIRELLRATLGRN
                     PQPSAGIVDSQSAKTTGVGGEA"
BASE COUNT          235 a          343 c          293 g          230 t
ORIGIN      
        1 ccgcatcgcc tatgatcctc cgcatcggca ctcctccttc gggcggtacc ttgacgcaaa
       61 tgataccaga ctcgggacag ccgagggacc tattcacccg agtgcctaga gagactgttt
      121 gaaaattctc gactgcccca aaacctaagc tcatgaacca acaaaagggt tagatgagac
      181 tcatctcccg gctctttgtc aagcggcctc tactctggcg agtggatggc gccgatctct
      241 tggagcaagc cgagtgcgtc ccagttagtc cagctctcca cgatcttgcc gccctcgaag
      301 cggtcggtct ggtgcccggt atgcgtcact accttgccgg tgggagccgc acccatgatc
      361 tcgccccggt gggtaccgct aacggtgaag cggctcacta ctttgtctcc ttcggccacc
      421 tgatcctcga tggtgacctg ggcatcgggg aaagcgctat ggatccactc tatcgatgcc
      481 ttcatgtcct cagcatgcac ctctccagtc gcgctggaag gatcgtaaaa gacgaagtca
      541 gggtccagaa gttcatctac tatatctgta tcaccctgaa cgtacccctc gatgaagcgg
      601 cgtgagaggg ccttattctc ctctaacatg tgcgtgtcct ccttccctta ggcacccttc
      661 acccatgcta gcagtggaga cgggctgatg cgctctgcga atcgtctgtg ccacaaaaaa
      721 gtctgaatat gactaggctc cggggcatga aaaagagcta ctcaaccgat ctcaccgacg
      781 ctgaatggga gtgcatcaag ccctatgttc cggcacccag caagcgaggg cgaccgagaa
      841 tccacggcag ccgcataatc ctcgacgcca tcttctacgt cttgaggagt ggctgtccct
      901 ggcggctttt accccgcaac ttcccaccgt ggtgcaccgt ctaccactac ttcagacgat
      961 ggagtctcga tggcacctgg gaaagggtga accggaccat ccgcgagttg ctgcgcgcta
     1021 cgctcgggcg aaatccccaa cccagtgccg ggatagtgga ctcgcaatcc gcaaagacta
     1081 ccggggtggg cggagaagcg c
//
LOCUS       DASQSL010000573         2378 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_99754, whole genome shotgun sequence.
ACCESSION   DASQSL010000573 DASQSL010000000
VERSION     DASQSL010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2378
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99754"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..223)
                     /locus_tag="VE844_05820"
     CDS             complement(<1..223)
                     /locus_tag="VE844_05820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015005650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZC00879.1"
                     /translation="MNNHAVLSCRDLHKTFTEGGLAVSVLRGVDLAVQPGERVAIVGT
                     SGSGKSTLLHLLGALDQPTAGEIYVMGIRV"
     gene            complement(216..1463)
                     /locus_tag="VE844_05825"
     CDS             complement(216..1463)
                     /locus_tag="VE844_05825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013219522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HZC00880.1"
                     /translation="MFKPLELYIGLRYTRAKRRNHFISFISLISMVGMALGVTALITV
                     LSVMNGFEKELRERILGMTSHASVLKLGQPLHHWQGVAEVIQHHPRILGMAPFVRAEA
                     MLTHEGNVHGVIVQGILPDREPKVSIVGERMESGHLSTLEPQSYNIILGEGLAKTLRV
                     RVGDKVTLVAPQPNVTPAGVLPRLKRFTLSGIFKIGMHEYDMGLAFIHMEDAMRLFRT
                     GEGVTGIRLKLDDMFAAPRLSREIIRMLPGDYGVVDWTQYHVNFFRALKTEKTVMFVI
                     LALIVAVAAFNIISTLVMVVTDKQADVAILRTLGLTPRNIMGIFIVQGIVIGIFGTLL
                     GIIGGVWLATHVEIIVPAIEQFFQTQFLPADVYYISEVPSDMHWQDVIHIGLLAFGLC
                     LLATLYPAWRAARTEPAEVLRYE"
     gene            1538..2215
                     /gene="tsaB"
                     /locus_tag="VE844_05830"
     CDS             1538..2215
                     /gene="tsaB"
                     /locus_tag="VE844_05830"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018231639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HZC00881.1"
                     /translation="MKLLAIDTSTEACSAALAIDNAVTNTRFELAPQRHAELILPMVD
                     QLLREADLRVGELDGLAFGQGPGTFTGVRIAAGIIQGIALGAELPIVPVSSLAALAQG
                     LFSERGQAKVLAAIDARIGEVYWGAYQVDERGILMAVQAECVGKPDTVPVPVAGRWFG
                     AGTGWDSYGPILQERLGDRLLGIEPRRYPHAREVAVLGIEAFKAGHGVVQAEYALPAY
                     LRDQVVD"
BASE COUNT          525 a          685 c          683 g          485 t
ORIGIN      
        1 ttacacgtat tcccatgaca tagatctcac cggcagtagg ttgatccagc gcaccgagaa
       61 gatgcagcag ggtgcttttg cccgaacccg aggtgcccac gatcgccacc cgctcgccag
      121 gctgcaccgc cagatccacc ccgcgcagca cactcaccgc cagccctccc tccgtgaagg
      181 ttttatggag atcccggcag gacaacaccg cgtgattatt catagcgcaa gacctcagcc
      241 ggctcagtgc gtgcggcccg ccaagcgggg tacaaggtgg ccaacaggca caggccgaag
      301 gcgagtaaac cgatgtggat cacgtcctgc cagtgcatat cggaaggtac ttcactgata
      361 tagtaaacat cggcaggcag aaattgcgtc tgaaaaaact gctcaatcgc cggtacgata
      421 atctccacat gggtagccag ccagacaccg ccgatgatcc caagcaaggt gccgaagatg
      481 ccgatgacta tcccttgaac gataaagatg cccatgatgt tccgcggggt aagcccaagg
      541 gtccggagga tagcaacgtc cgcctgtttg tccgtaacta ccatgaccag tgtggagatg
      601 atattgaagg cggccacggc gacgatcaga gccaggatca caaacatcac ggtcttttca
      661 gtcttgagcg cgcgaaagaa attgacgtgg tactgggtcc agtcaaccac gccataatcg
      721 ccagggagca tcctgatgat ctcgcgactg agtctgggcg cagcaaacat atcatcgagc
      781 ttgagacgga tcccagtcac accctcgccg gtgcgaaaca gcctcattgc atcctccata
      841 tggatgaacg ccaagcccat atcatactcg tgcatgccga tcttaaagat cccactcaag
      901 gtaaagcgtt taagccgcgg caagaccccg gcgggggtta cgttaggttg cggtgcgacc
      961 agtgtcacct tatcccctac cctgaccctc aaggtctttg ccagcccttc acccaggatg
     1021 atgttatagc tttggggttc gagtgtgctt aaatgtccgc tctccatccg ctcacccacg
     1081 atggagacct tcggttctct gtcgggcagg atcccctgca cgatcacccc atggacattg
     1141 ccttcatggg tcagcatcgc ctccgcgcgc acaaagggag ccatacccag gatccgtgga
     1201 tggtgttgga tcacttcggc tacgccctgc caatggtgca ggggttgacc gagcttgagc
     1261 acgctcgcat gggaggtcat gccgaggata cgttcgcgca actccttttc aaagccgttc
     1321 attaccgaca gcaccgtgat aagcgcagtg acgcccaggg ccataccgac catcgagatc
     1381 aaggagatga aggagatgaa atggttacgc cgtttggcgc gggtatagcg caggccgatg
     1441 taaagttcga gcggtttaaa catggcggga gattatatcc gaaagtcgag agccaacgag
     1501 gtataatgac atttaacgtg ttgctatttc aaagcccttg aaactccttg ccattgacac
     1561 ctcaacggaa gcgtgctcgg ccgctttagc gattgacaac gcggtgacca atacccggtt
     1621 cgagcttgcg cctcagcggc acgccgaatt gatcctgccc atggtggatc aattgctaag
     1681 ggaggcagat ctccgtgtcg gtgagttgga tgggctcgct tttgggcagg gaccgggcac
     1741 attcaccggg gttcgaatag cggcgggtat tatccaaggg atcgcgcttg gggccgagct
     1801 gccgattgtt cctgtatcgt ccttagcggc cttggcgcaa gggctgtttt ccgagcgcgg
     1861 gcaagccaag gtactcgcgg ctatcgatgc gcgtatcggc gaggtctatt ggggcgctta
     1921 ccaggtggat gaacgtggaa tactgatggc cgttcaagct gagtgtgtcg gaaaaccaga
     1981 caccgtaccg gtgcctgtgg ccggccggtg gttcggggcg ggcacgggct gggatagcta
     2041 cggcccgatt ctccaggagc gcctggggga ccggctctta ggtatcgaac cccggcgtta
     2101 ccctcacgcc cgggaagtgg ctgtccttgg gatcgaagcc tttaaagccg gtcatggggt
     2161 cgtccaagcc gaatatgccc tgccggctta tctccgggac caggtggtcg attagctcca
     2221 tcggtcttac aagcgctcga tcccggtctc aatccggcca ccgggttcca acaccagcca
     2281 gcgataaccc gcctgctttc tatctttggc ataggctgca acgtttggtc ggaactgcac
     2341 gcaggtcgag ggagaaccga gcaactgcac cccattgc
//
LOCUS       DASQSL010000574         1114 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_45542, whole genome shotgun sequence.
ACCESSION   DASQSL010000574 DASQSL010000000
VERSION     DASQSL010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45542"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..482
                     /locus_tag="VE844_05835"
     CDS             <1..482
                     /locus_tag="VE844_05835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011565633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome BD quinol oxidase subunit I"
                     /protein_id="HZC00882.1"
                     /translation="RFAVKPVEFLRKLSVGALGFTALFTALNIIPNDASLIPQIGLVF
                     LDGESTEIPLGSMYPWKYIGLIGLMIVGFFVVALYLRATATGFHWGRASRWSQYALIA
                     CAVTVVLTMVTMGYTRETARRVDNNPGYLIYKCITLEQELTPETCPAEGLEVSGGAE"
     gene            479..628
                     /locus_tag="VE844_05840"
     CDS             479..628
                     /locus_tag="VE844_05840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00883.1"
                     /translation="MIELALLLQEGSTGDPTAIGIFRFFAGFFIIMSFYLGFLGFTYW
                     ISKDE"
BASE COUNT          206 a          322 c          349 g          237 t
ORIGIN      
        1 tccgcttcgc ggtcaagccg gtggagtttc tgcgcaagct gtccgtaggg gctctcgggt
       61 tcacggcgct gttcacggcg ctcaacatca tccctaacga cgcgtccctg attccccaga
      121 tcgggctggt gttcctggac ggggagagca cggagatacc gctcggcagc atgtacccct
      181 ggaagtacat cggccttatc gggctcatga tcgtcgggtt tttcgtggtc gcgttgtacc
      241 tgcgcgccac ggcgacgggc ttccattggg gcagggcgag ccggtggagc cagtacgcgc
      301 tcatcgcctg cgccgtgacg gtcgtgctga ccatggtcac gatgggctac accagagaga
      361 cggccaggag ggtcgataac aaccccggtt acctgatcta caaatgcatc accctcgagc
      421 aggagctcac gccggagacg tgcccggctg agggccttga ggtgagcggg ggggcagaat
      481 gatcgagctg gcgctgctgc tgcaagaggg gagcaccggt gacccaaccg cgatcggcat
      541 cttccggttc tttgccggct tcttcatcat catgagcttc tacctgggat tcctgggctt
      601 tacctactgg atcagcaagg acgaataaag ccggtcggct agtcggcatg acgcttccaa
      661 aagggaactc gtcggcgatg ctcccgggcg tctccacttc tcttggacgc gatccctgct
      721 agaactgaag cgctgctgcc cagctgaatt gctgacaagc aaattagggc aacaatatac
      781 ttgagatgcc ttggactgag cacgtcgtca cgccttcgac cttttgcgcc cttccaaact
      841 gagcgtaaag aagggtgaga ggggtttgat ttctgaaggc agcgagtcca aggtaggtat
      901 ggctttactc cggctctgat tcggggcttc gattaagatg tcaccgtgcg aattcgtgga
      961 tacatcgaca ctgactggcc gtctgtctgg cccatcttcc gggaggtcgt cgccgcgggc
     1021 gacaccttcg cttacgaccc tggatggtcg tccgagcagg cccagaacgt gtgggtggag
     1081 gctcctcccg gccgcacagt tgtagcctgc gacg
//
LOCUS       DASQSL010000575         1195 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_99769, whole genome shotgun sequence.
ACCESSION   DASQSL010000575 DASQSL010000000
VERSION     DASQSL010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1195
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99769"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..179)
                     /locus_tag="VE844_05845"
     CDS             complement(<1..179)
                     /locus_tag="VE844_05845"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HZC00884.1"
                     /translation="MNEKVYRTELTPVSFLRRSAYMFPDKEAVVHGDRRYTYQEFKER
                     VNRLASRLKDVGFQKG"
     gene            complement(791..1030)
                     /locus_tag="VE844_05850"
     CDS             complement(791..1030)
                     /locus_tag="VE844_05850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00885.1"
                     /translation="MQGKRSVIILSNHVAGALELVAGEASEVLLPRITQLIYAELLRG
                     FLAGLTTLLVAGVGEPALDACVADEEGEVHPFEVK"
BASE COUNT          233 a          343 c          335 g          284 t
ORIGIN      
        1 cctttctgga accccacgtc cttgaggcgc gaggctaggc ggttgacccg ctccttgaac
       61 tcctgatagg tgtagcgccg gtcgccgtgt acgacggcct ccttgtctgg aaacatgtag
      121 gcgctgcgcc tgaggaagct caccggtgtg agctccgtgc ggtagacctt ctcgttcatg
      181 taggtacccc ttccctttgt tcggtctcgg tttcccttat acccagtacg cagtataaat
      241 gccttctctc gctttccgct accgccgcgc cggttctgaa agtgccttcg ccttctatag
      301 ttaacgagca gggacacaaa atatccttgt ttttgacctc acgagatgct acactttttc
      361 tactctacag aagtgtatct tcagctagat cttctgctgc atgaagctcc cgcggtgatg
      421 aaccgggggc gatttctttg cctggaggca agttgtgcct accgctgaat accaagaaac
      481 tgccagatgc actttcttct cgatctcttc ggatatacga ggggtactga cggcgtggtg
      541 ggagaccagt tcttgccggt cttcttcttg aggcagatgc tattaccgat aatacactgt
      601 catggggttg tttcgtgacc ccccaccttc catggggttc gtttcgcgca aaacgctgaa
      661 gttggcaggg ccacaacccc catcatgggg caaggacgcc catacgaccc aagagaggta
      721 cgcttccctc ctgtgcgagg ccgactcggc cctcctcata gcctgccgca gcctcgaggc
      781 cgagcctata ctacttgacc tcgaaggggt gaacttcacc ctcctcgtct gcgacacacg
      841 cgtcaagcgc gggctcgccg acaccggcta ccagaagcgt cgtgagacct gcgagaaagc
      901 cgcgcaaaag ctcggcgtag ataagctgcg tgatgcgtgg gaggaggacc tcggatgcct
      961 ctccggcgac gagctcaagc gcgcccgcca cgtggttcga gagaatgatt acggaccttt
     1021 tcccctgcaa aagatgtgtt tcggtgggac tgatcttcgt ttagtgcccg ccgttatcgg
     1081 gtaccaaaat attgttgtaa gcgaccgttt gagacggagg tcatatggcg aacgagttgc
     1141 agggccgcaa ggttgcgatc ctggccgagg atggggtcga gcaagtcgag ctggt
//
LOCUS       DASQSL010000576         1855 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_84865, whole genome shotgun sequence.
ACCESSION   DASQSL010000576 DASQSL010000000
VERSION     DASQSL010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1855)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1855)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1855
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84865"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..194)
                     /locus_tag="VE844_05855"
     CDS             complement(<1..194)
                     /locus_tag="VE844_05855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00886.1"
                     /translation="MDALRTGTLNGPQRTYLNRQCVRSPALLDSTPMQLVTTNHMADQ
                     INHHHLDRLSGQAQTYSGEIR"
     gene            complement(167..802)
                     /locus_tag="VE844_05860"
     CDS             complement(167..802)
                     /locus_tag="VE844_05860"
                     /inference="COORDINATES: protein motif:HMM:NF017754.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZC00887.1"
                     /translation="MSTEAPPPREPLTFNAEAQHVLDMLEKTSAHLLLTGRAGTGKST
                     LLQHFRHTTSKKCVVLAPTGAAAVSVGGQTIHSFFGFRPGITLDSVRIRSSGTSSIYK
                     QLDVVVIDEISMVRADLLDCIEKFLRLNGRLPGTPFGGIQMVFIGDLYQLPPVVPEDE
                     QELFETVYASPYFFDAPAYAQADVQRVELTAVYASAIPFSPSCWTRFAPAR"
     gene            919..1176
                     /locus_tag="VE844_05865"
     CDS             919..1176
                     /locus_tag="VE844_05865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00888.1"
                     /translation="MNRVFALSMAMSRRAITPSAGALAPALRGLDRRVRKRHLLEFAQ
                     GLFDLQIGVGQGRPSPSACRFTSLKWFTMAFDPTTGKTPRT"
     gene            1461..>1855
                     /locus_tag="VE844_05870"
     CDS             1461..>1855
                     /locus_tag="VE844_05870"
                     /inference="COORDINATES: protein motif:HMM:NF016724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HZC00889.1"
                     /translation="MAAVSASPLRLAPRPYQDEAVAAVLHGAQHGLKRPLIALPTGTG
                     KTIVFALLIQQRPGRALVLAHRDELIEQAVEKLHWIDPEMEIGVVKAERDEHEASVVV
                     ASVQTLSRCQRLARLVPDFDTIVIDEAHHA"
BASE COUNT          355 a          545 c          559 g          396 t
ORIGIN      
        1 cgtatctcgc cgctgtaggt ctgggcctgc ccgctcaggc ggtccagatg gtggtggttg
       61 atctggtcgg ccatgtgatt ggtggtcacc agttgcatgg gggtgctgtc cagtagggcg
      121 gggctgcgca cgcactgccg gttgagatag gtgcgctgcg gcccgttcag cgtgccggtg
      181 cgaagcgcgt ccaacagctc ggcgaaaacg ggatcgcgct ggcgtagacg gcggtcagtt
      241 ccacccgctg cacgtctgcc tgggcatagg ccggggcatc gaaaaaatag ggactggcgt
      301 aaaccgtctc gaacagctcc tgttcgtcct cgggtaccac ggggggcagc tgatagagat
      361 cgccgataaa aaccatttga atgccgccaa agggggttcc cggcaagcgg ccgttgagcc
      421 ttaggaactt ctcgatgcag tcgagcaggt cggctctgac catggagatt tcatcgataa
      481 cgaccacatc gagttgcttg tagatcgagc ttgtgccact ggagcggatg cggacactgt
      541 cgagcgtgat accgggacgg aagccaaaaa acgagtggat ggtttgaccg ccgacactaa
      601 ccgcggccgc gccggttggt gccaggacga cgcatttttt ggatgtggtg tggcgaaaat
      661 gctggagcag ggtggatttg cccgtcccgg cgcgcccggt gagcaagaga tgcgctgaag
      721 ttttctccag catgtccagg acgtgttggg cctcggcatt aaacgtcaga ggctcgcgcg
      781 gtggcggtgc ttctgtcgac atgagcttcc cttttcaagt ggcgcagggg gcaggtgccc
      841 ctgccggttg atcgtctata tcgtaaacca tttcaggcaa ctgtgcttga atccgcctgt
      901 tgggcgccgt atacagtgat gaatcgggtg ttcgccttgt ctatggcgat gtcccgccgg
      961 gccatcaccc caagtgcagg ggcgctggcc cctgcgctga ggggtctaga ccgccgcgtc
     1021 cgtaagcgcc atctgctcga gttcgctcag ggcttgttcg acctccagat aggggtcgga
     1081 cagggtcgcc cctccccatc cgcttgcagg tttaccagtc tgaagtggtt tacaatggct
     1141 ttcgatccga ccacaggcaa gaccccaagg acatgaaaaa agccattccc ttcctttacc
     1201 cttcctggtt tttttcatgg ctatacaagt gctgccgcac gtgagatgtc tcacctggca
     1261 attcgctttg gcacgactta ccacgtacta ccgcacagaa ggacatcatt tgccacgaaa
     1321 tggcgccccg gttccatgaa aagcccatag tctcctcatg acgtcatgac cttcggcctg
     1381 tataatgaag cacaaagcgt gaatccaggc tgccgtttcc cgcttgcccc acatccgctg
     1441 ccatcgcaaa aggagctcgc atggctgccg tttcggcgag cccccttcgg cttgccccca
     1501 gaccttatca agacgaagcc gttgccgctg tcttgcacgg tgcacagcac ggtctgaaac
     1561 ggcctctcat cgcgctgccc accggcacag gcaaaaccat cgtgtttgcc ctcctcatcc
     1621 agcagcgccc gggccgtgcc ctcgtcttgg cccaccgcga tgaactcatc gagcaagcgg
     1681 ttgagaaact ccactggatt gatccggaga tggaaatcgg tgtggtcaaa gctgagcgcg
     1741 atgagcatga agcgtccgtg gtggttgcca gtgtgcagac cctcagccgg tgccagcgct
     1801 tagctcggct cgtgcccgat tttgacacca ttgtcatcga tgaagcgcac cacgc
//
LOCUS       DASQSL010000577         4215 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_84883, whole genome shotgun sequence.
ACCESSION   DASQSL010000577 DASQSL010000000
VERSION     DASQSL010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4215
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84883"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(322..903)
                     /locus_tag="VE844_05875"
     CDS             complement(322..903)
                     /locus_tag="VE844_05875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010304370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZC00890.1"
                     /translation="MAKLVGYARVSTSEQEVELQLDALRQAGCANEHIFIDKASGARS
                     ERPGLDACLRLLKPGDTLLVWRLDRLGRSMPHLVMLIEELLGKGIGFRSLCDGVIDTT
                     TASGELIFNLFSALAQFERRLIQERTKAGLSAARARGRKGGRKPISSDDPRVQMAKRM
                     YHNHAMSINRICRTLKISRATFYRYIALPDKTN"
     gene            1071..4088
                     /locus_tag="VE844_05880"
     CDS             1071..4088
                     /locus_tag="VE844_05880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032495017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3 family transposase"
                     /protein_id="HZC00891.1"
                     /translation="MPAEFLTAEQRRRYGHYNGEPSPDQLARYFHLDDADLVLINQRR
                     GDHNRFGFALQLCTVRFLGTFLNDPGDTPVNAKRYLAHQLGLDEPSDLAGYRAERTHW
                     RHIEEIQRRYGYRDFTDPGEHFRLVRWLYSRAWLSSERPSLLFDLATARLVERKVLLP
                     GVTVLERLVGRVQDRAARRLWRLLAAAPTSLQRAYLEGLLDVPEGGRQSHLDRLRRGP
                     NRVSAPALVGALHRLQAIRALGASDINLERFPPSRIQTLARYAAKTSAPMIARMPDER
                     RIATLLAFAKTFEITTLDDALDVFDFLMTDLLRDAKKTGEKERLRTLRDLDAAALELH
                     KACVILLDDAIPNAGLREVIFARVSRTRLQEASAQVATLARPADDRHQQELVGCYGRV
                     RGCWPLLLRTIAFQAIPAGQAVLRALDFLAANPSRRRLDYGRAPLEGIPRAWLRRIVD
                     ADGQIDRRAYTVCALERLQDGLQRRDIFVSGSQRWGDPRVKLLHGTRWEALRPQVCRA
                     LGHQETADQAIMTCTQQLHIAYRQTLANLSTNAAVRFEGPPGREELIVSNLDKLVEPP
                     SLIELRRQVTARLPRVDLPEVLLEVQAWTGFADEFFHLSEANARVSDLVISLCAGLMA
                     EACNIGLEPLIRLDHPALTRDRLGWVLQNYIRADTLIRANARLVDYQATLALAQAWGG
                     GEVASADGLRFVVPLRTLNAGPNRKYFGASRGVTYYNFTSDQFTGFHGIVIPGTLRDS
                     LFILEGLLEQQTSLRPVQLMSDTAGSSEIVFGLFWLLGFQFSPRLADMGGSRFWRIDR
                     QADYGVLDRISRHPVNTDRIRRHWDDMLRVAGSLKMGTVSASELMRSLLNTERPSTLA
                     RAIADLGRIPKTLHLLRLIDDEGYRRSILTQLNRGEGRHSLAREVFHGHRGELRQRYR
                     EGQEDQLGALGLVVNVLVLWNTVYMQAALDQLRAEGYQVNPDDIARLSPLGYKHFNFL
                     GRYSFNLAESVASGKLRPLRNPNDLNHLMGIFA"
BASE COUNT          851 a         1233 c         1214 g          917 t
ORIGIN      
        1 gggcctctca cgtggtcgga agcagtattt ccagagtccg ttccgcggtt ggattgagag
       61 acttaatgac gctatattcc tcgatcgtga tgatgccttc gatgtggtcc aggatggcat
      121 gcagtgggct ctccctaata actcaaagtt tacaggttgg tgatgaattc aagcagcgag
      181 tttcaatttt ttgatctcct tgagtgtttc ttgctgagtg gtgcgtttaa tttgttgggc
      241 gccgacgtcc caagcaaatt tctgcttgag aaggcccttg acgagcagcc ggacagaaag
      301 tgtacataag cagcagggat actaattggt cttgtcgggt agggcgatat accggtagaa
      361 agtagcgcgt gaaatcttga gcgtccggca tattcggttg atgctcatag cgtgattatg
      421 gtacatccgc ttagccatct gaacgcgggg gtcatcactg ctgatcggtt tacgaccacc
      481 tttccgcccg cgtgctctcg cagccgataa acccgctttg gttcgctctt gaatcagccg
      541 ccgctcaaat tgagcgagcg ccgagaagag attgaagatc aactctcccg aggcggtggt
      601 cgtatcgatg actccgtcac agagcgagcg aaaaccgatt ccctttccga gcaattcctc
      661 aatcagcatc accaagtgcg gcatcgaacg gccgagccga tccagccgcc acaccaagag
      721 agtatcaccc ggtttgagta gccgaagaca cgcatcgagg cccggtcgtt cggaccgagc
      781 gccagacgct ttgtcaataa agatgtgttc attggcacac cccgcctgcc tcagcgcatc
      841 cagttgaagt tctacctcct gttcactggt gctgactcgt gcatagccga ctagctttgc
      901 catctgatcc ccggctgatc gatcgccatc tcatttttat ggcctacact tggattaatg
      961 agactttaat tcatgagatg gaaaaatgct acgactacaa caccgaatcg gcccatctga
     1021 agcggctgca cccatcgtct caccaaacga tcgtttgatg agagcttctc atgcccgctg
     1081 aatttttaac tgccgagcag cggcgtcgct acggccatta caacggcgag ccatcaccag
     1141 accaacttgc ccggtatttt catctagatg atgccgatct agtgctgatc aaccagcggc
     1201 gcggggatca taaccggttc ggattcgcgc tgcagctatg tacggtgcgc tttcttggta
     1261 cctttctcaa cgatcccggc gacacaccgg tgaacgccaa gcggtatctc gcacaccagc
     1321 tcgggctcga tgaaccatcc gacctggcag gctaccgagc agaacgcaca cattggcggc
     1381 acatcgaaga aatccaacgc cgctacggct atcgcgactt tactgacccg ggcgagcatt
     1441 tccgcctggt gcgctggctc tatagccggg cgtggctgag cagtgagcgg ccgagcctac
     1501 tctttgacct ggcgacggct cggttggtgg aacgtaaggt gttgctgccc ggcgtgacgg
     1561 tgctggagcg gctagtaggt cgagtccagg accgagccgc ccggcggctg tggcggttat
     1621 tggctgccgc gcccacgtcg ctacaacgag cttacttgga ggggcttttg gacgtgcctg
     1681 agggcggtcg ccagagtcat ttggaccgac tgcgccgcgg tcccaaccgg gtgagtgcgc
     1741 cagcgttggt gggagcacta caccggctgc aggcaatccg tgcactgggc gcgagcgata
     1801 ttaacctgga gcggtttccg ccgagccgca tccagacgct cgcgcgctat gcagccaaaa
     1861 cctccgcccc aatgatcgcc cgcatgcccg acgagcggcg catcgccacc ttgctggcgt
     1921 ttgccaaaac ctttgagatc accaccttgg atgacgccct cgatgtattc gactttctca
     1981 tgacagacct cctacgcgac gccaagaaaa caggcgagaa ggagcggcta cgaaccctgc
     2041 gcgatctgga tgcggcggcg ttggaattgc acaaggcctg tgtgatcctg ctcgacgacg
     2101 cgatcccgaa cgctggcctt cgcgaggtga tttttgcgcg tgtctcacga acacgtttac
     2161 aggaagcctc ggcccaagtg gctaccctgg ctagacccgc agacgaccga caccagcagg
     2221 aactggttgg ctgctatggt cgggtgcgcg ggtgttggcc gctgctgttg cgcaccatcg
     2281 cttttcaagc gatcccagcc ggtcaggcgg tgttgcgggc attggatttt ttagccgcga
     2341 accctagccg gcgccgactc gattatggca gggcgccgct ggaagggatc ccgcgcgcct
     2401 ggttgcgccg catcgtcgat gcggatgggc agatcgaccg ccgcgcctat accgtatgcg
     2461 ccttggagcg actccaagac ggtttgcagc gccgcgacat atttgtcagc gggagccagc
     2521 gctggggcga tccgcgcgtc aaactcctgc atggtacgcg ctgggaggcg ttgcggccgc
     2581 aggtctgccg cgcgctgggt catcaagaga cggccgatca agcgatcatg acttgcaccc
     2641 agcagctcca catcgcgtat cggcagacac tggccaatct gtcaactaat gccgctgtac
     2701 gctttgaagg tccgccgggg cgggaagagc tgatcgtatc gaacctggac aagttagtgg
     2761 agccgcccag tctgatcgaa ctccgtaggc aggtcacggc gcggctgccg cgcgtagacc
     2821 tgccggaagt attgctggag gtccaggctt ggaccggctt tgctgatgag tttttccacc
     2881 tcagcgaagc caacgcccga gtgagcgatt tggtgatcag tctctgtgcc ggactcatgg
     2941 ccgaagcctg caatatcggc ttggaacctc tgatccggtt ggaccatcct gcactaacac
     3001 gggaccgtct cggctgggtg ttgcagaact atatccgcgc cgatactctg attcgcgcta
     3061 acgcgcggct ggtcgattac caggcaacac tcgcgctcgc ccaggcctgg ggcggtggcg
     3121 aggtcgcctc agccgatggg ttgcggttcg tggtgcccct ccgcaccctc aacgctggcc
     3181 cgaaccgcaa atacttcggt gccagtcggg gtgtgacgta ttacaacttc acctcggacc
     3241 agttcaccgg ctttcacggc attgtcatcc ccggcacgct gcgcgactca ctgtttatct
     3301 tagaggggct gctggaacag caaaccagcc tacgaccggt tcaactgatg tcggataccg
     3361 ccggaagtag tgagatcgtg tttggtctgt tctggttatt gggctttcaa ttcagccccc
     3421 gtcttgccga catgggcggc agccggttct ggcgcatcga tcgtcaagcc gattacggcg
     3481 ttctggatcg catttctcgc caccccgtga ataccgaccg aatccgccgc cactgggatg
     3541 atatgctgag ggtagcaggt tctctaaaga tgggcacggt cagtgcctca gaattgatgc
     3601 gctccttact caacaccgaa cggccgtcga cgctggcccg tgcgatcgcg gacttaggcc
     3661 gcattcccaa aacactccac ctgctgcgcc tgatcgacga cgaagggtac cgccgaagta
     3721 ttctaaccca gcttaatcgt ggcgaagggc gccacagcct ggcccgagag gtctttcacg
     3781 gccatcgcgg cgagctacgc caacgctacc gcgaaggtca agaagatcag ctcggcgcac
     3841 tcggcttggt tgtcaacgtg ctggtgctat ggaatacggt gtatatgcaa gcagcgctcg
     3901 accaactccg tgccgagggt taccaggtaa acccggacga catcgcgcgg ctgtcaccac
     3961 tcggttataa gcactttaac ttcctggggc ggtactcatt caatttggct gagtccgtcg
     4021 ccagcggcaa gctacggcca ttgaggaacc cgaacgatct caaccatctg atgggtattt
     4081 ttgcctgatc gaatgatggg cttatgtaca ctttctgtcc ggctgctcgt caagggccaa
     4141 aataagatta tttaccagag gccgggaatt gctgtgaaac gttcacattt cattttgaaa
     4201 caatctaagc ctttc
//
LOCUS       DASQSL010000578         1333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_182090, whole genome shotgun sequence.
ACCESSION   DASQSL010000578 DASQSL010000000
VERSION     DASQSL010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1333
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182090"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1333)
                     /locus_tag="VE844_05885"
     CDS             complement(<1..>1333)
                     /locus_tag="VE844_05885"
                     /inference="COORDINATES: protein motif:HMM:NF024904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZC00892.1"
                     /translation="TGLLGLKDLRSRIDTEASALFSPRGSNPLINKAITEYEEARREV
                     RTLSVKSSDWIRLKKERDEVHSELDKIAQDLQIQRRERERLMRIQRNLLLIGRRAEYL
                     KELHDLGEVPALPEEAKEERRAIVRDREQAEADLKAVQTKILKLQDELRSLEIPYKVL
                     DHAARIEDLYQQVQSYRGALRQLPALEAERQSAQNQALARLGEIQPDLPLEHVDRLRL
                     GRSDLAKIRHLIAEHSKRSTVLEGLQAQCLDKQQSLSEAERQLAEFPIRRDLSQLEAA
                     LEAVTAEGNLEHRLIKSGLAYEAEQTHLMDQIASLWRGALDRFERLAVPLRTQVQQFE
                     QEAAEITSERRLIEERIATLSRDRQTLASQQAVLVATGEVPSHEQLELARQRRDQGWQ
                     LIRQGYIDKTADVSKRASDYDPDCPLPEAFEHTITRTDRLADLLRTDSMRIT"
BASE COUNT          224 a          399 c          388 g          322 t
ORIGIN      
        1 ggttatgcgc atggagtcag tgcgcaacag atccgccagg cggtcggttc gagttatagt
       61 gtgttcaaag gcctcgggca gcgggcagtc aggatcgtag tcagaggccc gcttagaaac
      121 atcggcggtc ttgtcgatat agccctggcg gatgagctgc cagccttggt cgcgccgttg
      181 gcgcgccaat tccagttgtt cgtggcttgg gacctcaccc gtcgctacca gcacggcttg
      241 ctgactcgcc agggtctgcc gatcccggct caaggttgct atccgctcct cgatgagacg
      301 acgttcgctc gttatctcag ccgcctcctg ctcaaactgc tgcacttgcg ttcgcagtgg
      361 caccgctaga cgctcaaacc gatccagagc gccccgccag agcgaggcga tctggtccat
      421 caggtgcgtc tgttccgcct cgtaggcgag cccagatttg ataagcctgt gctccagatt
      481 gccctctgca gtcacagcct cgagtgcggc ctcaagttga cttaagtctc gacgtattgg
      541 aaactcggcg agttgtcgtt cggcttcact gagggactgc tgtttgtcaa gacattgcgc
      601 ttgcaagccc tcaaggacgg tggagcgttt gctgtgctcg gcaatgagat ggcgtatttt
      661 agccagatcg gatcggccaa ggcgcaggcg gtccacgtgc tctaagggaa gatccggctg
      721 gatctcgccg agtcttgcca gcgcctggtt ttgcgcgctc tgccgctctg cttcaagcgc
      781 aggcaattgc cgcaatgcac ctcggtagct ctgcacctgt tggtagaggt cttcgatacg
      841 cgcggcatgg tccagcactt tatacggtat ctcgaggctt ctgagctcat cctgaagttt
      901 caggatcttg gtttggaccg ctttgagatc ggcttccgcc tgctctcgat cgcgcacgat
      961 cgccctgcgc tcctctttcg cttcttcggg aagcgccggc acctcgccga gatcgtgcaa
     1021 ttccttgaga tactcggcgc ggcggccgat cagcagcaga ttgcgctgaa tgcgcataag
     1081 gcgctccctc tcgcgccgct gtatctggag atcctgcgct atcttatcga gctcgctatg
     1141 cacctcatcg cgttcttttt taagcctgat ccagtcgctg ctttttaccg agagcgttct
     1201 gacctcgcgc cgggcctcct cgtattcggt gatcgccttg ttgataaggg gattgctgcc
     1261 acgggggcta aacaatgcgc tggcttcagt gtcgatgcgg ctgcgcagat ccttaagccc
     1321 caaaagaccc gtg
//
LOCUS       DASQSL010000579         3703 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_141794, whole genome shotgun sequence.
ACCESSION   DASQSL010000579 DASQSL010000000
VERSION     DASQSL010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3703
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141794"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..386
                     /locus_tag="VE844_05890"
     CDS             <1..386
                     /locus_tag="VE844_05890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013219259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HZC00893.1"
                     /translation="IAAEAAATIYRLERLASNIEDELDNTTRFLVIGRYSTPLSGHDK
                     TSLIFSTPNTAGALYNMLATFAEHRISMMRIESRPSRRGMWDYLFFVDIEGHAEDQGV
                     ARALRELEARASMLKLLGSYPRAVM"
     gene            396..1499
                     /gene="hisC"
                     /locus_tag="VE844_05895"
     CDS             396..1499
                     /gene="hisC"
                     /locus_tag="VE844_05895"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002685186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HZC00894.1"
                     /translation="MAYDFLSLAAPGVRDLQAYQPGKPIEALEREYGLCAVVKLASNE
                     NPLGPGKLARQALHHAARESLGRYPDGSGFLLKRALAHRLGVEMNQITLGNGSNDVLE
                     LVARTFVTPADEVIFSEHGFAVYPLVTQAIGAKAIVTRALEFGHDLKAMEQSVAERTR
                     LIFIANPNNPTGTWVEATALRQLLDAVPLHVLVVVDEAYFEYVDTPGYPDGVAWIAHY
                     PNLIVTRTFSKIHGLAGLRVGYGISHPALAELMNRVRQPFNVNSLALAAAQAALEDEE
                     HIARSFSINKTGLEQLVDAFKNLGLGFIPSVANFISVDLERPGIEIYESLLRKGVIVR
                     PVANYGLPHHLRVTVGLEHENARFIEALSQVLS"
     gene            1499..2425
                     /locus_tag="VE844_05900"
     CDS             1499..2425
                     /locus_tag="VE844_05900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002685812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004665 - prephenate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0008977 - prephenate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006571 - tyrosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase/arogenate dehydrogenase
                     family protein"
                     /protein_id="HZC00895.1"
                     /translation="MPIKRLTIIGVGLIGGSLARALKRARACAEIIGCDVTGAEKAAA
                     SGMTDSFYTEIGAAVKDAEMVVIAVPLGAMAGVFQQLREYLDDHTILTDVGSVKGQVV
                     EEARRFLGPHWPRFVPGHPVAGTEKSGIEASFAELFAGHWVILTPLAETEATAIERVT
                     ELWEQAGAQVETMEVTRHDEVLAATSHLPHVLAYSLVQTLAKMEPAGAVFRFAAGGFA
                     DLTRIASSSPELWHDIVFANREAVLHLIERFHQELGAVTEAIRTHDSHTLMDSFSRAK
                     VARDAFTAGRQQYPARTVDRVRKADDCLCRSP"
     gene            2410..>3703
                     /gene="aroA"
                     /locus_tag="VE844_05905"
     CDS             2410..>3703
                     /gene="aroA"
                     /locus_tag="VE844_05905"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008932236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HZC00896.1"
                     /translation="MPITLIINPGGGLQGRLRVPGDKSVSHRAIMLGAIAEGRTELHG
                     FLEGEDTLATLAAFQAMGVAIDRPAPGHVRIQGVGLRGLKPPSQPLYLGNSGTSMRLL
                     AGLLAGQAFDSVLTGDASLSKRPMQRIVEPLSRMQAQLQCTAASTPPLSIIGGRSLRG
                     ITYVMPVASAQVKSCLLLAGIYAEGRTCLIEPGPTRDHTERMLERFGYPLVPLENGVC
                     IDGSGRLQGAAIRVPADLSSAAFFLVGATIARDADLMLEQVGVNLTRTGVIDILRLMG
                     ADLSLTNPRDEGGEPVADIRVRTSRLHGIEIPKPLVPLAIDELPVLFVAAACAEGVTV
                     VKGAQELRYKESDRIQTMACGLRALGIHAQATEDGMIIEGGTLTGGSIDSQGDHRVAM
                     AFAMAALSASDPIEIRDCENINTSFPRFAEMAHGVGLDI"
BASE COUNT          717 a         1051 c         1131 g          804 t
ORIGIN      
        1 cgatcgcggc tgaagcggca gccacgatct atagattaga gcgccttgcg agcaacatcg
       61 aagatgagct cgataatact acccgattcc tcgtgatcgg gcgctattca acgccactca
      121 gtggtcatga caagacctca ctgatcttct ctacaccgaa cacagccggt gcgctctata
      181 atatgctggc cacctttgcc gaacatagga tcagcatgat gcggatcgaa tcacggccct
      241 cgcggcgcgg tatgtgggat tatctcttct ttgtggatat cgaaggtcat gccgaggatc
      301 aaggggtggc tcgcgccttg cgggaattgg aggcgcgcgc ctcgatgctg aagctattag
      361 gctcctatcc ccgggcagtg atgtagggct ttaacatggc gtatgatttt ctctcactcg
      421 ccgcccccgg cgtcagggat ctgcaagctt atcaaccggg gaaacccatc gaagcgttgg
      481 agcgcgaata tggtctctgc gctgtagtca aactcgcctc gaatgagaat ccactgggac
      541 cggggaagtt ggcgcggcag gccctacacc atgccgctcg ggaatcgctc ggccgctacc
      601 cggatggcag cgggttccta ttaaaacgcg ccttggccca ccggcttggt gtggagatga
      661 accagatcac cctgggcaac ggctccaatg atgtcttgga acttgtggcc cgtaccttcg
      721 taacgccggc cgatgaggtc atattttccg agcatggatt tgctgtctat cccctggtga
      781 cccaggccat aggcgcgaaa gcgatagtga cgcgggcgtt agagtttggc catgatctca
      841 aggcgatgga acagagcgtt gcggaacgaa cacggctcat ctttatcgcc aatcccaata
      901 atcctacggg aacctgggtg gaagcaacgg cactgcgcca acttttggac gccgtgcctt
      961 tgcacgtgct ggtggtggtc gatgaagcct acttcgaata tgtggacacc ccgggctacc
     1021 cagacggtgt agcctggatc gcgcattatc ccaatctgat tgttacccgt accttctcca
     1081 agatccatgg ccttgcagga cttcgggtag gttatgggat ctcgcaccca gcgctcgccg
     1141 agcttatgaa ccgggtgcgg caacctttta acgtcaatag tctagcgctg gcagccgcgc
     1201 aagccgcgct cgaggacgag gagcacattg cccgcagctt ctctattaac aagacgggcc
     1261 tggagcaact agtggacgcc tttaaaaact tggggcttgg gtttatcccc tcggtagcca
     1321 attttatctc ggtggatctc gagcgtcccg gcatcgagat ctatgagtct ttactgagaa
     1381 aaggcgtgat cgtgcggccg gtggcgaact acgggctgcc tcatcacctg cgggtgacgg
     1441 ttggactgga gcacgagaat gcgcgcttta tcgaggccct gagccaggtg ctaagctgat
     1501 gcccatcaag cgccttacca ttatcggagt tggtcttatc ggcggctcgc tggcccgtgc
     1561 gctcaagcgc gctcgggcct gtgccgagat catcggctgc gatgtgacag gcgcggagaa
     1621 ggccgctgca tcagggatga ccgatagttt ttatacagag atcggcgccg ccgtcaagga
     1681 cgcagagatg gtggttattg ctgtacccct tggggctatg gccggggtgt ttcagcaatt
     1741 acgggaatat ctcgatgatc atacgatact aaccgatgtg ggcagtgtca aaggccaggt
     1801 cgtggaagaa gcacgccgtt ttttaggccc gcattggcct cggttcgtgc cgggacatcc
     1861 ggtggccggc accgaaaaga gcgggatcga ggcctcgttt gccgaattgt ttgccgggca
     1921 ctgggtgatc ctgacaccgc tggccgagac cgaggccaca gccatcgaac gggttaccga
     1981 gctctgggag caggcgggtg cccaggtcga gactatggag gttacacgtc acgacgaagt
     2041 cctggcggcg accagtcact tgccgcatgt cctcgcctat tccctggtgc agaccttggc
     2101 caagatggaa cccgcgggcg cggtgtttcg ctttgccgcc ggggggttcg ccgatctcac
     2161 ccggatcgcc tcgagtagcc cagagctttg gcacgatatc gtgtttgcta atcgtgaggc
     2221 ggttctccac ctcatcgagc gcttccatca ggagcttggg gctgtaaccg aggccattcg
     2281 cacccatgac agccataccc ttatggacag cttcagccga gcgaaagtgg cccgtgatgc
     2341 attcaccgcc ggccggcaac aatatcccgc caggactgta gatcgagtga gaaaggcaga
     2401 tgactgtcta tgccgatcac cttgattatt aatcccggcg ggggattgca aggacggctg
     2461 cgggttccgg gcgacaagtc agtctctcac cgcgccatca tgctgggtgc gatcgcagaa
     2521 gggaggaccg agcttcacgg ttttttagag ggcgaggata ccctggcgac gcttgcggcc
     2581 tttcaggcga tgggggtcgc catcgatcgg ccggcccctg gccacgtgcg gatccagggc
     2641 gtcggtcttc gcggtctcaa gccgccctcg caaccgctct atctcggcaa ttcagggacc
     2701 tccatgcgcc ttttagccgg tttactcgcg ggtcaagcat tcgatagtgt gttgaccggc
     2761 gatgcctcgc tttctaagcg tcctatgcag cggatagtcg agcccttatc acgtatgcag
     2821 gctcagcttc aatgcaccgc cgccagcacg cctcccctct ctatcattgg cggccggtcg
     2881 ctgcggggca tcacgtatgt tatgccggtg gccagcgccc aggtaaaatc gtgcctcttg
     2941 ctcgccggga tctatgctga gggccgcacc tgcctcatcg agcctgggcc gacacgggac
     3001 catactgaac gtatgttaga gcgcttcgga tatcccctcg tgccactcga gaacggcgta
     3061 tgtatcgatg gcagtgggcg cttgcagggt gctgcgatcc gggttccggc cgatctctct
     3121 tcagcggcgt ttttcctggt cggggccacg attgcgcgag acgctgatct gatgctcgag
     3181 caggtgggag tcaatctcac ccgcacaggg gttatcgata ttctgcggct gatgggcgcc
     3241 gatctgagcc tcactaatcc gcgcgatgag ggtggcgagc ctgtggctga tatacgggtg
     3301 cgcaccagcc gactgcacgg cattgagatc ccaaagccgc tggtgccgct ggctatcgat
     3361 gaactccccg tgctctttgt tgcggccgct tgcgcagagg gtgtaaccgt ggttaagggt
     3421 gcgcaagaac ttagatacaa ggaaagcgac cggatccaga ccatggcctg cgggttgcgc
     3481 gcccttggca tccacgctca ggctaccgag gatgggatga ttatcgaagg cggaaccttg
     3541 accggcggct ctatcgatag ccagggcgat catcgggtgg ctatggcctt tgcgatggcc
     3601 gcgctgtctg ccagcgatcc tattgagatc agggattgcg aaaacataaa tacctccttc
     3661 cctcggtttg cggagatggc gcacggcgtt ggcttggata tat
//
LOCUS       DASQSL010000580         4499 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_18710, whole genome shotgun sequence.
ACCESSION   DASQSL010000580 DASQSL010000000
VERSION     DASQSL010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4499)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4499)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4499
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18710"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            27..4424
                     /locus_tag="VE844_05910"
     CDS             27..4424
                     /locus_tag="VE844_05910"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008954544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HZC00897.1"
                     /translation="MTLNCFHPAVTHWFKGSFLSPTPCQEQAWPVIRAGQSTLIAAPT
                     GSGKTLAAFLVAIDDLVRQAENGTLVEATQVVYISPLKALSNDIQRNLEQPLRGILEH
                     FRQQNPGGIDIRTMVRTGDTSQADRQTMRKRPPHIVVTTPESFYILLTSEGGRRMLST
                     TRTVIVDELHAVAGNKRGAHLALSLERLDALVASRVLRIGLSATQRPIIEIARFLVGG
                     CAAGEPPCTIIDTGYSRARDLAIELPRSPLQAVMSNEVWQEVYDRLAGLILAHRTTLV
                     FVNTRRMAERVTRHLSERIGGQHIATHHGSLAREHRLQAEQRLKAGRLRALVATASLE
                     LGIDIGEIELVCQLGSTRAIATVLQRVGRSGHGIGGLPKGRLFPLSRDDLIECVALLD
                     AVRRGELDCLTIPKQPLDVLAQQIVAIVAGEEWSEEALYRLVRRAYPYRDLIREDFKA
                     VVRMLAEGFSTRRGRRGAYLHQDAVNKRLRARRGARLIAITSGGAIPELADYEVRQVP
                     TDTFVGSVNEDFAIESLAGDIFQLGNTSWRVLQVEGRGVVRVQDAHGQPPTIPFWFGE
                     APARTAELSTAVSRLRAAVEAQLTSGRSIETVQAWLSQEIGGIAPAAAHQILDYLASG
                     RAALGVMPTQDTLVMERFFDESGGMQLVLHAPFGSRLNRAWGLALRKRFCRKFNFELQ
                     AAATEDAVVLSLGEMHSFPLTDVWQYLNSATVREVLIQALLDAPMFTVRWRWNATVSL
                     AVLRCWSGKRVPPRLQRIQAQDLLGLVFPDQQACIENLAGAREIPDHPLVHQTLYDGL
                     TEAMDIDGLEKLLKEIECGKKRLVARDLTEPSPLAQEILTAKPYAFLDDAPLEERRTQ
                     VVMSRRWLDPDTVSDLGRLDPVAIERVKREAWPAPESADELHEALVLLGFVTEEEAAT
                     QLCGRRTVIEAQEWLGELISERRATVLEIGAGLPKLWVVAERLPQLLAVHALASMSPP
                     IGVPQEYAQTHWSRAAALVELVRSRLEGSGPVTAAQLGSSLGVTEGALMPALLALEGE
                     GFALRGSFTEHVLELQWCERRLLARIHRYTLKRLRQEIEPVSQADFMRFLFCWHHLGV
                     SEPLAGPQALNAVLEQLAGFIAPAAAWEADLLPARVSDYQPDWLDSACLSGRVIWRRL
                     TPLPKNGFTKGSSTGPIRTTPIALLSRAWAWWQASVPADPTERPLTPAAQRLAHCLHD
                     RGASFFQDFVDTLGLLKAQVEEALAELVNKGMVSSDSFAGLRSLLAPAPRRGSFKGYK
                     RRPIASSIEDAGRWALVESTRRDACAAGEQESQGQVAGMEAIAWTLLRRYGVICRQLL
                     EREPALPPWRELLKVYRRLEARGEIRGGRFVAGMSGEQFALPEAVGALRDIRRQPKEN
                     KLISITGADPLNLVGIVTPGARVPALVTNRILYRDGVPIALQLGREVRLLDRGAQQED
                     EWALKQALIRRSRKGPAYTSTAHRPLLAI"
BASE COUNT          841 a         1274 c         1442 g          942 t
ORIGIN      
        1 ctttgtgacc ctggctttgt gattgaatga cactcaactg cttccatccc gctgtcacgc
       61 attggttcaa gggaagtttt ctatccccaa ccccctgtca agaacaggcc tggcctgtga
      121 tccgggcagg ccagtctacc ctcattgcgg cgcccacggg gtctggtaag accctggcgg
      181 ctttcttggt ggccattgat gatctggtgc gtcaagcgga aaacggtacg ctggtggagg
      241 ctacccaggt ggtctatatc tcaccgctca aagcattgag caatgatatt caacgtaacc
      301 tggaacagcc gcttcgaggt atcctggagc acttcaggca gcaaaaccct ggggggattg
      361 atatccgtac gatggtgcga accggcgata cttcccaagc ggatcgccag accatgcgca
      421 aacgcccgcc tcacatcgtc gttaccaccc ccgaatcgtt ttatattctg ctgacaagcg
      481 aaggcggacg gcggatgtta tccaccaccc gtaccgtgat cgtcgatgag ctccatgccg
      541 ttgcaggcaa caaacgcggc gcccatctcg ccttgagctt ggaacgcttg gatgcactcg
      601 tggcaagccg ggtcttgcgc atcggtctct cggccaccca gcgccccatt atagagatcg
      661 ctcggtttct ggtaggagga tgcgcagccg gcgaaccgcc gtgcacgatc atcgataccg
      721 gctatagccg agcgcgagat ctggcaatag agctgccgcg ctcgccctta caagccgtga
      781 tgtccaatga ggtgtggcag gaggtctatg atcgcctcgc tgggcttatc ctggctcatc
      841 ggactacgct ggtgtttgtc aatacccggc gcatggcgga gcgtgtgacc cggcatttaa
      901 gtgagcggat cggcgggcag catatcgcta cccatcatgg cagcctggcg cgcgagcaca
      961 ggctgcaggc agagcaaagg ctcaaggccg gtcgattgcg agcgttagtg gcgacggcct
     1021 cactcgagct tgggattgat atcggtgaaa tagagctggt gtgccagctt gggagtaccc
     1081 gtgctatcgc caccgtgttg cagcgcgtcg ggcgctcggg gcatgggatc ggcggcctgc
     1141 caaaggggcg attgtttccc ttgagccgcg atgatctcat cgagtgtgtg gcgctcctcg
     1201 atgccgttcg ccggggcgaa ttggattgcc tgaccatccc aaaacagccg ctggatgtgc
     1261 tggcccagca gatcgtggcg atcgtagccg gtgaggagtg gtctgaagag gcgttatata
     1321 ggttagtccg ccgggcctat ccctaccggg atctgatccg agaggatttc aaggcggtgg
     1381 tgcgcatgct ggcagagggc ttcagcaccc ggcgggggcg gcggggcgcc tatttgcatc
     1441 aagatgcggt taacaaacgc ctgcgggcgc ggcgcggcgc gcggctcata gccattacct
     1501 ctggcggtgc gatcccagag cttgcggatt acgaggtccg gcaagtgccc accgatacct
     1561 ttgtagggag cgtgaatgag gacttcgcca tcgagagtct cgccggtgat atctttcagc
     1621 tgggcaatac ctcctggcga gtcctgcagg tggagggtag gggggtcgtg cgggtccaag
     1681 atgcccacgg tcagccgcct acgatcccgt tctggtttgg cgaggctccc gcacggacgg
     1741 cagagctttc taccgcggta tcgcgtttgc gggcggcggt tgaggctcag ctcacctcag
     1801 gaaggtcgat agaaaccgtc caagcgtggc tgagtcaaga aatcgggggg atcgcaccgg
     1861 ctgccgctca ccagatccta gactatcttg ccagcggccg agccgcctta ggtgtcatgc
     1921 caacccagga tacgcttgtt atggagcggt tcttcgatga atcgggcggc atgcagctgg
     1981 tactgcatgc tccgttcggt tcacggctca accgggcctg ggggctcgcc ttgcgcaagc
     2041 gtttttgccg taagtttaat tttgagctgc aagccgctgc gacggaggat gccgtggtgc
     2101 tctcgctggg ggagatgcat agctttccgc ttactgatgt ctggcagtat ctgaactcgg
     2161 ccactgtccg cgaggtgctg atccaggcgc tgctggatgc gccgatgttc acggtgcgtt
     2221 ggcgctggaa cgcaaccgtt tctctggccg ttctccgctg ttggtcaggc aagcgggttc
     2281 cgccaaggct tcagcggatc caggctcagg atctgttggg cttagtgttc ccggatcaac
     2341 aggcgtgtat cgagaatctt gccggggcac gcgagatccc ggaccatccc ctggtccatc
     2401 aaaccctcta cgacggcttg accgaagcca tggacatcga tggcctggag aagctgctca
     2461 aggagataga atgcggcaag aaacgcttag ttgcgcgcga tctcaccgaa ccctcaccgc
     2521 tcgcgcaaga gatattgacg gccaagccgt atgcttttct cgatgatgcg ccgcttgagg
     2581 agcgccgcac ccaggtggtg atgagccggc gctggctgga cccagacacc gtctccgatc
     2641 tgggccggct tgatccggtg gccatcgagc gcgtgaagcg agaggcttgg cccgcacccg
     2701 agtcggccga tgaactgcac gaggctttag tgttgttagg atttgtcacg gaagaggaag
     2761 cggccactca gctatgtggc cggaggacgg ttattgaggc tcaggagtgg ctcggtgagc
     2821 tcatctccga gcgccgggcc accgtgttgg agatcggtgc cggtcttccc aagctctggg
     2881 tggtagcgga gcgcttgccg cagctattgg cggtccatgc gctggcgtcg atgtctccgc
     2941 cgatcggggt gccgcaggaa tatgctcaaa cccattggtc gcgggcagcg gcgctcgtgg
     3001 aattggtgcg cagtcggctc gagggctcag ggccggtgac tgctgcccaa ctcggaagct
     3061 ccctgggtgt gactgaaggc gcgctgatgc cggctctgct ggcgctcgag ggagagggct
     3121 ttgccttgcg cggaagtttt accgagcatg tgcttgagct tcagtggtgt gagcggcggc
     3181 tgctcgctcg tatccatcgc tataccctaa agcgtctgcg ccaggagatc gagcccgtct
     3241 cacaggccga tttcatgcgc tttttattct gctggcatca cctgggtgtt tctgagccgc
     3301 tcgcaggtcc gcaggccctt aacgctgtac ttgaacaact ggcgggtttt atcgccccgg
     3361 cggctgcttg ggaggccgat ctcctgccgg cacgggtgag cgactaccag ccagactggc
     3421 tggatagcgc ctgtctatcg ggacgggtga tatggaggcg gctgaccccc ctacctaaaa
     3481 atggttttac caagggatcg agcaccggac cgatccgcac tacaccgatc gccttactta
     3541 gccgcgcctg ggcttggtgg caggcaagcg tgcctgccga tccgaccgag aggccgctga
     3601 ccccggcagc gcaacgcctg gctcactgtc ttcacgatcg aggtgcatcc tttttccagg
     3661 acttcgtcga taccctggga ttactgaaag cacaggtaga ggaagccctg gcggaactgg
     3721 tcaacaaagg gatggtaagc tccgatagct tcgccggact gcgatcgttg cttgcgcctg
     3781 cccctagacg cggctcgttc aagggatata agcgccggcc gattgcctct tctatagagg
     3841 atgcaggccg ctgggcgttg gtggagagca cacgccgtga tgcatgtgcc gccggtgaac
     3901 aggagagtca ggggcaggtg gcggggatgg aagcgatcgc ctggaccctc ctgcgccgct
     3961 atggtgttat ctgccggcag ctgttggagc gggaaccggc actgccgccc tggcgtgagt
     4021 tactcaaggt ctaccgccgc ctcgaggcgc gtggagagat ccggggtggg cggtttgtgg
     4081 cggggatgag tggggaacaa tttgccttgc cggaagcagt aggggcctta cgggatattc
     4141 gccggcaacc taaggagaat aaactcatct caatcactgg ggcagatccc ttgaatctcg
     4201 taggcatcgt tactccaggc gcacgcgtcc ctgccctggt caccaatcgg atcctctatc
     4261 gggatggcgt gcctattgcc cttcagcttg gccgtgaggt acggttattg gaccgaggag
     4321 ctcaacaaga ggatgaatgg gccttgaaac aagccctgat ccgccggtcg cgaaaggggc
     4381 ctgcttacac gagcactgcc cacagaccat tgcttgccat atagcaagag ttcaaaaaat
     4441 accctctaga gaaagataaa aacgatgaag atcgttatca cgccggattc tttcaaaga
//
LOCUS       DASQSL010000581         1485 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_45632, whole genome shotgun sequence.
ACCESSION   DASQSL010000581 DASQSL010000000
VERSION     DASQSL010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1485
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45632"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..618
                     /gene="rfaD"
                     /locus_tag="VE844_05915"
     CDS             <1..618
                     /gene="rfaD"
                     /locus_tag="VE844_05915"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017377933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008712 - ADP-glyceromanno-heptose
                     6-epimerase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HZC00898.1"
                     /translation="IPFLYASSAAVYGWGAVFCEGREYEAPLNVYGYSKLLFDQYVRR
                     RLPEIQSQVVGLRYFNVYGPREQHKEAMASVAYHLNRQLITEGEVRLFAGSDVYAGGE
                     QRRDFVYVADVVAVNLWFMKHPNLSGIFNVGTGRSQSFNDLAQAVLAWHGRGTIAYIP
                     FPEHLRGCYQSFTEADLSALREVGYGGHFRPVEEGVKAYLDWLNA"
     gene            615..>1485
                     /locus_tag="VE844_05920"
     CDS             615..>1485
                     /locus_tag="VE844_05920"
                     /EC_number="2.4.99.12"
                     /EC_number="2.4.99.13"
                     /inference="COORDINATES: protein motif:HMM:NF016311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HZC00899.1"
                     /translation="MRSAYTLLLYLATPFLFLRLGWLGFRNRGYRQGWSERLGFVRLP
                     SSSRPRLWIHAVSVGEVQAATPLVHALRRQCPDLEILLTTTTPTGAERVRRQLAGQAF
                     HCYLPYDLPGAIGRFLKRVQPLAVIIMETELWPNLLHLCKRFNIPVILANGRLSRRSM
                     QGYQRLPGLTRTMLADIAAIAAQTRDDADRFIRLGADPARVSVIGNLKFDVRLPADIY
                     DRAKLLRRALGEQRPIWITASTHEGEEAIVLDALDKLLVLEPAVLVLLAPRHPERFDH
                     VFELCQKRGLKIIR"
BASE COUNT          271 a          436 c          424 g          354 t
ORIGIN      
        1 atcccatttt tatacgcctc aagcgcggcg gtctatggct ggggcgctgt attttgtgag
       61 gggcgcgagt acgaggcgcc gctcaatgtc tacggttact ccaagttact attcgaccag
      121 tatgtacgcc gccggctccc agaaatccaa agccaggtgg tgggtttacg ctatttcaat
      181 gtctatggtc cccgggaaca gcacaaagaa gccatggcga gcgtggctta tcatcttaat
      241 cgacagttga tcaccgaggg cgaggtccgg ctatttgcgg ggagcgatgt atatgccggt
      301 ggcgagcagc gccgcgattt cgtttatgta gccgacgttg tcgctgtcaa tctctggttc
      361 atgaagcatc ccaacctgtc cgggatcttc aatgtgggca ccggtcgcag ccagagtttc
      421 aatgatctcg cccaggcggt acttgcctgg cacggtcgtg gaaccattgc ctatatccct
      481 ttccccgagc atctacgcgg ctgttatcag agctttaccg aggccgatct cagcgccttg
      541 cgtgaagtgg gttacggggg ccactttcgc ccggttgaag aaggtgtcaa ggcgtatctg
      601 gactggctga acgcttgaga tcggcctata ccttgctcct ctacctggct acccctttcc
      661 tattcttgcg tttgggctgg ttaggtttcc gcaaccgagg ttaccggcaa ggctggagcg
      721 agcgtttggg ctttgtccgc ctgccttcct ccagccgtcc tcgcctctgg atccatgcgg
      781 tctcggtggg cgaggtgcaa gcggccacac cgctcgtgca tgcgttacgg cgacagtgtc
      841 cggatctcga gatcctgctg accacgacca cgcctacagg tgcggaacgc gtgcgtcggc
      901 aactggccgg tcaagccttc cattgttacc tgccctatga tctgccgggc gccatcgggc
      961 gatttctcaa aagggtccaa ccccttgcag tgatcatcat ggagaccgag ctctggccga
     1021 atctcctgca tctttgtaag cgcttcaata tccctgtgat cctggccaat gggcggcttt
     1081 cgcggcgttc catgcagggt tatcagcgct tgccgggcct cacccgcact atgcttgcgg
     1141 atatcgccgc gatcgccgct cagacacgcg acgacgccga tcggtttata aggcttgggg
     1201 ccgatcccgc ccgggtgtcc gtcattggca atctcaaatt cgatgtcagg ctgcccgccg
     1261 atatctacga ccgagcaaag ctactccgtc gcgcgctcgg tgaacagcgt ccgatctgga
     1321 tcactgccag cacccacgaa ggcgaagaag cgattgtgct cgatgccttg gacaagctgt
     1381 tagtcctgga accggctgtg ctcgtgttgt tggcgccccg ccatcccgaa cgttttgatc
     1441 acgtttttga actctgccaa aaaagaggct tgaagattat caggc
//
LOCUS       DASQSL010000582         2720 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_18716, whole genome shotgun sequence.
ACCESSION   DASQSL010000582 DASQSL010000000
VERSION     DASQSL010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2720
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18716"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..373
                     /locus_tag="VE844_05925"
     CDS             <1..373
                     /locus_tag="VE844_05925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013031290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HZC00900.1"
                     /translation="AMEGGSAASSPADGSASGRVIYFDYDRDEIRPEFRHIIESLVNH
                     LANHPNTVVTLEGHTDERGSREYNLALGEKRALAVHRQIGLMGADAGHARTVSYGEER
                     PAALGHDEHSYGLNRRVEIIY"
     gene            384..1289
                     /gene="ybgF"
                     /locus_tag="VE844_05930"
     CDS             384..1289
                     /gene="ybgF"
                     /locus_tag="VE844_05930"
                     /inference="COORDINATES: protein motif:HMM:NF024915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system protein YbgF"
                     /protein_id="HZC00901.1"
                     /translation="MLTKRLCALLLVPVLGLLSTGNYVIAQEEAPVIELQREDPGTAL
                     SRSERLSSHRALLDLQNQIAGLEREIKRLRGELEEQTHRLEQLGKRQRDHYLDIDQRL
                     QTLEGGKVARKPAESGAPSSTAAPLETLPSSTPEDTRPGAATDMGKTPGPAAKLPSAA
                     PPAKSTTTLATAAPPEHEAYQQAFDLLKSGRYDESLTAFDDFLIKYPNGNYADNAQYW
                     LGETYYVRRHFEPAIIEYEKLIQNYPKSQKLTHALLKIGYSYHELGQIDKAKATLEDL
                     KNRYPDTTAARLAEERLQRITFERP"
     gene            1358..2026
                     /gene="queE"
                     /locus_tag="VE844_05935"
     CDS             1358..2026
                     /gene="queE"
                     /locus_tag="VE844_05935"
                     /EC_number="4.3.99.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013028662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HZC00902.1"
                     /translation="MSEALLPIRAQTVRITEIFFSLQGETNRVGLPTVFIRLTGCPLR
                     CRYCDTAYAFYGGKTLSIDTILAEVSRYRTDFVTVTGGEPLAQRSCLMLLKQLCDAGY
                     RVSLETSGALDISKVDQRVMKIVDLKTPGSREERKNRYENLRALSPTDQLKIVICDRR
                     DYQWAKAKMEQYGLAEYCEVLLSPSSGQMDPALLADWILQDRLRVRFQIQLHKYLWGD
                     TPGR"
     gene            2016..2702
                     /gene="queC"
                     /locus_tag="VE844_05940"
     CDS             2016..2702
                     /gene="queC"
                     /locus_tag="VE844_05940"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012273759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HZC00903.1"
                     /translation="MDANKAIVLISGGLDSSTTLAVAQAEGYACYGLTVDYGQRHRSE
                     LDAARRVAKRLGVRDHKVIRLDLGTIGGSALTDPALAVPTSPTAGIPITYVPARNTVL
                     LGLALGWAEVLEAWDIFIGVNAIDYSGYPDCRPEFIESFESTARLATRAGVEGRLFRI
                     HTPLIYLSKAQIIEEGIRLGLDYSITVSCYQADEAGRACGLCDACRLRAEGFKAAGVP
                     DPTCYSSCVW"
BASE COUNT          597 a          794 c          787 g          542 t
ORIGIN      
        1 cgctatggag gggggttcgg ctgcctcatc cccggccgat ggctccgctt cagggcgggt
       61 tatctatttc gactatgata gggatgagat caggccggag ttccggcaca tcatcgagtc
      121 cctggtcaac catcttgcca atcatcccaa cacggtagtg acgctggaag ggcacaccga
      181 tgagcgcggt tctcgagaat ataacctcgc cttgggggaa aagcgtgctt tggcggtcca
      241 ccgacagatc gggctcatgg gggccgacgc gggacatgcc cgaacggtga gctatgggga
      301 ggaacggccc gctgcgcttg gccatgatga acactcctat gggcttaatc gccgggtcga
      361 gatcatttat taggagtagg attatgctga caaagcgcct ctgcgcctta ttattggtac
      421 cggtgctggg cctgctatcc accgggaact atgtcatcgc ccaggaggag gcgccggtga
      481 tcgagttaca acgcgaggac ccaggaaccg ctcttagccg tagcgagcgt ttgtcaagcc
      541 accgcgcgct gctcgatctg caaaaccaaa tagccggcct cgagcgagaa atcaagcgct
      601 tacggggaga gctcgaagag caaacccatc gcttggagca actcggtaaa cgccagcgcg
      661 atcactacct ggatatcgat cagcgtctgc aaaccctcga gggcggcaag gtagccagaa
      721 aacctgccga gtcgggcgct ccatcctcta cagcggcacc gcttgaaacg ctgccatcga
      781 gcaccccgga ggatacaagg ccaggcgcgg ctacagacat gggaaaaacc ccggggccgg
      841 cagcaaagct gccaagcgca gcgccaccgg ccaaaagcac cacgaccctc gctacagccg
      901 ccccgccgga gcacgaggcg tatcagcagg cctttgactt actcaaatca ggccgctatg
      961 acgaatcctt gacagccttc gatgacttcc ttatcaagta tcccaacggc aattacgccg
     1021 ataacgcgca atattggcta ggagagacgt actacgtgag gcgtcacttc gagcctgcta
     1081 taatagagta tgaaaagctc attcaaaatt atccaaagag ccaaaagctg acgcacgcgc
     1141 tcctcaagat cggctatagc taccatgagt tgggccagat cgataaggcc aaggcgacgc
     1201 tcgaggatct caagaaccgc tatcccgaca cgaccgctgc gcgtctcgcc gaagaacggt
     1261 tgcagcggat cacgttcgag cggccgtaag ggttatctca acatccataa atcggacgcc
     1321 ttgggtccag aggccgggcg tctttccaga cataaggatg agtgaagcgc tccttccaat
     1381 ccgggcacag accgtccgca ttacggagat cttcttttcc ttacaaggag aaaccaatcg
     1441 agtcgggcta cccaccgtat ttatacggct tacgggttgt ccgttgcgat gccggtactg
     1501 cgacaccgcg tatgcctttt atggtgggaa aacgctgtcg attgatacga tcctcgcgga
     1561 agtctcccgc tatcgcaccg actttgtgac tgtgaccggc ggggaacctt tggcgcagcg
     1621 atcgtgcctt atgctgctca agcagctttg tgacgccggc taccgggtct cgctggagac
     1681 cagtggcgcc ttggatatct ccaaggtcga ccagcgggtc atgaagatcg tcgacctaaa
     1741 gactccgggt tccagggaag agagaaagaa tcgctatgag aatctccgtg cgctctcgcc
     1801 tacggatcag ctcaagatcg tgatctgcga tcgccgagat taccaatggg ccaaggccaa
     1861 gatggagcaa tatggcttgg ccgagtattg cgaggtcttg ctctcgccca gcagcgggca
     1921 gatggatccg gctcttctgg ccgattggat cctacaggat agacttaggg tccgctttca
     1981 gatccaactc cacaagtatc tatggggtga tacacctgga cgctaacaag gccattgtcc
     2041 tgatctcggg gggcttggat tccagcacca cgctcgccgt tgcccaagca gagggctatg
     2101 catgctatgg gttgaccgta gattacggtc aacgccatcg ctcggagctc gatgcagcgc
     2161 gacgtgtagc aaagcgactc ggggtccgcg atcacaaagt gattaggctc gatctgggta
     2221 ccattggtgg ctcggcactg acagatcccg cgcttgctgt cccaacgtcg ccaaccgccg
     2281 gcatccccat cacctacgtc ccggcccgca ataccgtatt actgggcttg gcgctcggct
     2341 gggccgaggt cctggaagca tgggacatct ttatcggcgt caatgccatc gactactccg
     2401 gctatcccga ttgccggccg gaattcatcg aatctttcga gagcacggct cgactggcga
     2461 ctcgtgccgg tgtcgaaggc cggctgttta ggatccatac accgctcatt tatctcagta
     2521 aggcccagat catcgaggag gggatacggc tcggactcga ttattcgatc acggtttcct
     2581 gctaccaggc cgatgaagcg gggcgcgcct gcggcctctg cgatgcctgc cgcttgcggg
     2641 ccgagggctt caaagccgcc ggcgtcccgg atccgacctg ctactcttcg tgcgtttggt
     2701 gaggaacttc aggccgggga
//
LOCUS       DASQSL010000583         1580 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_29947, whole genome shotgun sequence.
ACCESSION   DASQSL010000583 DASQSL010000000
VERSION     DASQSL010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1580
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29947"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..322
                     /locus_tag="VE844_05945"
     CDS             <1..322
                     /locus_tag="VE844_05945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007918191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HZC00904.1"
                     /translation="VPRVIITDQLKSYGAAKREMLPRVEHRQHRYLNNRVENSHQPTR
                     QRERRMQGFKSPGHAQRFLAAYGPIAQHFRPRRHLLPAPQYRQEMEKRFHTWQEITRL
                     QTAA"
     gene            complement(459..788)
                     /locus_tag="VE844_05950"
     CDS             complement(459..788)
                     /locus_tag="VE844_05950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00905.1"
                     /translation="MAERRSMASALTPEKIAFLKGDPPEPHPSVEEPSPQSIPEKVRR
                     ASPAPAPVGRERVTVTVRLEPDVVAALVQASAERKVKRLHPHSQQDIVGDALKLWLRD
                     AGFWPPR"
     gene            complement(788..1447)
                     /locus_tag="VE844_05955"
     CDS             complement(788..1447)
                     /locus_tag="VE844_05955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020472288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZC00906.1"
                     /translation="MLIAMVNSKGGVGKSTLAVHFAAWLHDSGHRVILLDCDLQRSSS
                     QWIAEAEQGVRVEVYHSEDEVIEQAPILQREADIVIADGPAGLKELTRALLLVADMAL
                     IPCGPSVLDLRAASEAIRVVKQAQSIRGGTPEAKLILNKVQPRYRLSRELQDASRSFD
                     IPAASHAVGLRQAYADAVGQGTVVWRMGTAAKTAAEELNALFLELVPKRDLRVVQGGR
                     R"
BASE COUNT          312 a          479 c          467 g          322 t
ORIGIN      
        1 cgtgccgcgg gtcattatca ccgatcagct gaaaagctat ggcgcggcga agcgcgagat
       61 gttgcccagg gtggagcacc gccagcatcg ctatctcaat aatcgggtgg agaactccca
      121 ccagcccacc cgccagcggg agcgccggat gcagggcttc aagtcgccgg gtcacgccca
      181 acgcttcctt gctgcgtatg gaccgatcgc gcagcatttt cgcccgcgac gccacctgct
      241 ccccgccccc caataccgtc aggagatgga aaaaagattc cacacctggc aggaaatcac
      301 gcgccttcag accgccgcat aagagtaatg atccaggcag tcatacacct tcatgcgagt
      361 tgctcatgtc gacaggcaac aagttgacaa tgccgtccct gacaagcttt tcctcccctg
      421 tcgctattgt tggtgggaga ggacatctga ggtgtgttct atcgaggcgg ccaaaatccc
      481 gcatcccgaa gccagagctt aagggcatcg ccaacgatgt cttgctggga gtgggggtgg
      541 aggcgcttga ctttgcgctc ggcggaggct tggaccaagg ccgcgaccac gtcaggctca
      601 aggcgcacgg ttaccgtgac ccgctccctt cccacgggcg ccggagccgg agatgccctt
      661 cgcaccttct ccgggatgct ctgcgggctc ggctcctcca cgctcgggtg cggctccggt
      721 gggtcgccct tgaggaaggc tatcttctca ggggtaagag cactggccat acttcgccgc
      781 tccgccatca gcgccgccct ccttggacga ctcgcaggtc acgttttggc acaagctcga
      841 gaaagagcgc attgagttct tctgcggctg tcttagccgc cgttcccatg cgccagacga
      901 ccgttccctg ccctaccgca tcagcgtatg cctgcctgag gcccacggcg tgcgaagcgg
      961 cgggaatatc gaagctccgc gacgcgtcct ggagttcacg gctcaagcgg tagcgtggct
     1021 gtaccttgtt gaggatgagc tttgcttcag gcgtgccgcc tcgaatggac tgggcttgct
     1081 tgacgacgcg aattgcttcg gaggccgctc gcaggtcgag gacggatgga ccacacggga
     1141 tgagggccat atcagcgacc aagagaagcg cccgggtgag ttctttcagc ccagctggcc
     1201 catctgcgat gacgatatct gcctctctct ggaggatggg cgcctgttca atgacttcgt
     1261 cctctgagtg atagacttcc actctcaccc cttgttctgc ctcggcaatc cactgcgagg
     1321 acgagcgctg cagatcgcag tcaaggagga tgacgcggtg gccactgtcg tggagccacg
     1381 ccgcgaaatg gaccgcaagc gtcgacttac caacgccgcc tttgctgtta accatggcaa
     1441 taagcatggc aggcattatg agagcagagg ggaaagcctg caagcttttt ttcaagtatg
     1501 taagcttgca agcaagcttg cttgcctata agctttccgc tcaatttatc ggagtttgta
     1561 gcaggttgaa atggtcaaag
//
LOCUS       DASQSL010000584         1248 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_84897, whole genome shotgun sequence.
ACCESSION   DASQSL010000584 DASQSL010000000
VERSION     DASQSL010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1248
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84897"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..190
                     /locus_tag="VE844_05960"
     rRNA            <1..190
                     /locus_tag="VE844_05960"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            376..>1248
                     /locus_tag="VE844_05965"
     rRNA            376..>1248
                     /locus_tag="VE844_05965"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          290 a          304 c          408 g          246 t
ORIGIN      
        1 tcgcgccagc ggcatcgctc ggtagccatg tgcggaaggg ataaccgctg aaagcatcta
       61 agcgggaagc cccccccaag atgaggtctc cctgaaggcc cctcgtagac tacgaggttg
      121 ataggcggga ggtgtacgca ccgtaaggtg ttcagctgac ccgtactaat cggccgttcg
      181 gcttggccat cctctccagc tcagatgcag tactcgtcag gcagtgcccc taagtcggtg
      241 agaaccccta gatcggggct cacttacttg ggggcgttcg tgatctttgt tcacggctaa
      301 gaaggctctt tgacaactga acagcgggtg tttaagacgg tcagcgcatc ttaaggaacc
      361 tgttttgcag caggtttttc ggagagtttg atcctggctc agaacgaacg ccggcggcgt
      421 gcttaacaca tgcaagtcga acgcgaaagc ctgggcaact gggcgagtag agtggcgaac
      481 gggtgagtaa gacgtgagta acctaccctc gagtggggaa taactcctcg aaaggggatc
      541 taataccgca taagaccacg acttcttcgg gagttgaggt caaaggtggc ctcatcgatt
      601 agagcgtttg ggcacacatt ctgatttcgt cgggagaatg tgtgccccag cgctttgtca
      661 gtgaagctat cgcttgagga ggggctcgcg gcccatcagc tagttggtag ggtaatggcc
      721 taccaaggcg acgacgggta gctggtctga gaggacgacc agccacacgg gaattgagat
      781 acggtcccga ctcctacggg aggcagcagt ggggaatctt gggcaatggg ggaaaccctg
      841 acccagcgac gccgcgtggg ggatgaaggc cttcgggttg taaacccctg ttcggtggga
      901 cgaacatttt cccatcaata gtgggaaaat ctgacggtac caccagagaa agccccggct
      961 aactccgtgc cagcagccgc ggtaatacgg agggggcgag tgttgttcgg aattactggg
     1021 cgtaaagggc gcgcaggcgg cttggcaagt cgagtgtgaa atacctcagc ttaactgagg
     1081 aatggcgctc gaaactacct cgctagaggg cgggagaggg aagtggaact ctcggtgtag
     1141 gggtgaaatc tgtagatatc gagaggaaca ccggtggcga aggcggcttc ctggcccaca
     1201 tctgacgctg aggcgcgaaa gcgtggggag caaacaggat tagatacc
//
LOCUS       DASQSL010000585         1208 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_166988, whole genome shotgun sequence.
ACCESSION   DASQSL010000585 DASQSL010000000
VERSION     DASQSL010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1208
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166988"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..250)
                     /locus_tag="VE844_05970"
     CDS             complement(<1..250)
                     /locus_tag="VE844_05970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015756229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HZC00907.1"
                     /translation="MKKSGAEIFVECLLQEGVDAIFGHPGGVVLKIYDVLMDAPIRHM
                     LMRHEQSAVHAADGYARATGRPGVCLATSGPGATNCVTG"
     gene            complement(495..728)
                     /locus_tag="VE844_05975"
     CDS             complement(495..728)
                     /locus_tag="VE844_05975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012546280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF465 domain-containing protein"
                     /protein_id="HZC00908.1"
                     /translation="MTTDENALIEHLKQTNPEFRQLMEEHLRYERQLEEFNKLRYLTS
                     QQEIEKKHVQKLKLHGKDRMAEILKEHKSRLTK"
     gene            complement(754..>1208)
                     /locus_tag="VE844_05980"
     CDS             complement(754..>1208)
                     /locus_tag="VE844_05980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00909.1"
                     /translation="QAMQRAVLGVDTLEALAMKALYSQYPVCSVLDARKGEVFGAIFR
                     VSAGGPRRLTPNLVMPPEAFCANITEPTLLLGTGVDVYREIWDRHLGELAIFAPPWLG
                     MPCSVEVGALAFTQATVGSGGPGAVLTPVYVRASEAEVNWSRQHDDDP"
BASE COUNT          256 a          382 c          323 g          247 t
ORIGIN      
        1 agccggtcac gcagttagtc gcaccgggac cggatgtggc caggcacacg cccgggcgcc
       61 ccgtggcacg ggcataccca tcggcagcat ggaccgcact ctgctcgtgc cgcatgagca
      121 tgtggcggat gggggcgtcc atcaacacat cgtaaatctt caagaccacg ccacccggat
      181 ggccaaagat ggcgtccacc ccttcctgca gcagacactc gacgaagatc tctgctccac
      241 ttttcttcac cgcacattac ctcctcagac ccttcaccgt cgctaatcgg cgccctcaca
      301 ccccgcctac gacaaagccc tggagcactt ggtatgcgca gccgacatga ccgctcctgg
      361 atctgatacg atacgcgcta gcaggctact gggcgtttag gcaccccgat ctcagggctt
      421 ttgaaggcgg gctcgaggca attgtaaaac cctagcaaac agccctgctg aagtcaactg
      481 aaaaaagcgt ccatctattt ggtcagacgg gatttatgct cctttaaaat ctccgccatg
      541 cggtccttgc catgcagctt gagcttctgc acatgcttct tctcgatctc ctgttggctg
      601 gtcaagtagc ggagcttatt gaactcctca agttgccgtt cgtaccggag gtgttcctcc
      661 atcagctggc ggaattcggg gtttgtctgc ttgaggtgtt cgatgagggc gttttcatcc
      721 gtcgtcatgt gatgtttacc tccctcacag ccattacggg tcatcgtcat gctggcggga
      781 ccagttgacc tctgcttccg aagcgcgcac atagaccggg gtgagcacag caccaggccc
      841 gccagaaccg acagtcgctt gggtgaatgc cagcgccccc acctcaacac tgcacggcat
      901 ccccagccat gggggcgcga aaatagccaa ctcgccaaga tgtctatccc agatttcccg
      961 atagacatcg actcccgtcc cgagcaagag ggttggttcg gtgatattag cacagaatgc
     1021 ctcgggaggc atgacaaggt taggggttag gcgacgaggg cccccggcac tgacccgaaa
     1081 gatcgcaccg aacacctccc ccttgcgagc gtcgagcaca gaacacaccg gatactggga
     1141 atatagcgct ttcatggcca aggcttcgag ggtatcgaca cccagcacgg cgcgttgcat
     1201 cgcctgtc
//
LOCUS       DASQSL010000586         2294 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_84904, whole genome shotgun sequence.
ACCESSION   DASQSL010000586 DASQSL010000000
VERSION     DASQSL010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2294
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84904"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..706
                     /gene="cysE"
                     /locus_tag="VE844_05985"
     CDS             <1..706
                     /gene="cysE"
                     /locus_tag="VE844_05985"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018954500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009001 - serine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HZC00910.1"
                     /translation="AARTTLEVLTTSAGLHAIWLHRVSHRLWDLGLKWPARLLSHVSR
                     WFTGVEIHPGATIGRRLFIDHGMGIVIGETSEIDDDCSLYHGVTLGGTTWNKGKRHPT
                     LHNNVVVGAGAKILGPITVGANARIGSNAVVVKDVPPGATVVGVPGHVAAPKDDKSKR
                     REAMAKRIGFDAYGTTKDTPDPIANAIDSLLDHIHSMETQIEAMQKAMQEHGIAIPKG
                     GDRSAETHLPTETHLL"
     gene            854..1357
                     /locus_tag="VE844_05990"
     CDS             854..1357
                     /locus_tag="VE844_05990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010181280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcription factor"
                     /protein_id="HZC00911.1"
                     /translation="MRLTTKGRYAVTAILDLALHQEQGPVALAAISLRQGISLAYLEQ
                     LFARLGKKALVKSARGPGGGYRLGRPAGAISIAEVISAVDESVDATRCGGLKNCQGDQ
                     RCLTHDLWEDLSIQIYSFLSQITLAELVARRSVRAVSERQDSQVIHISVPRTRTVREE
                     RGVRSEE"
     gene            1435..1758
                     /locus_tag="VE844_05995"
     CDS             1435..1758
                     /locus_tag="VE844_05995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000301573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HZC00912.1"
                     /translation="MGIILTERAASHVKRFLAKHGTAMALRVGVKPTGCSGYAYVVEP
                     AASIGEEDTVFESQGVKVVVNAKSLGYLTNTELDYTREGLNEGFKFYNPNVKATCGCG
                     ESFNV"
     gene            1777..>2294
                     /locus_tag="VE844_06000"
     CDS             1777..>2294
                     /locus_tag="VE844_06000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006162013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HZC00913.1"
                     /translation="MAIPHSQSMEALVNRTYEAGFYTDLESDTAPPGLNEDIIRLISD
                     KKQEPEWLLEWRLAALRHWLTMTEPKWATVQHPPIDYQAISYYSAPRSKNDGPKSLDE
                     VDPKLLETYEKLGIPLRERELLAGVAVDAVFDSVSVATTFKEKLAEAGVIFCSFSEAV
                     QRHPDLVRQYLGT"
BASE COUNT          513 a          622 c          688 g          471 t
ORIGIN      
        1 cgcggcccgc actaccctcg aggtgctgac gacttcggca gggcttcatg ccatctggct
       61 gcaccgggta agccacaggc tctgggatct tggcctgaag tggcctgccc gcctgctatc
      121 ccatgtgagc cgctggttca caggggtcga gatccatccg ggggccacga tcgggcggcg
      181 gctctttatc gatcatggca tgggcatcgt cattggggag acctccgaga tcgacgatga
      241 ttgctcgctc tatcatggcg tgactctggg cggcaccacc tggaacaagg gcaagcgcca
      301 tccgacctta cacaataatg tggtggtcgg ggcaggcgct aagatccttg gacctattac
      361 ggtcggcgcc aacgcccgga tcggctccaa tgcggtcgtg gtcaaggatg taccgcctgg
      421 ggccacggtc gtgggtgtgc ctgggcatgt agcggccccc aaggatgaca agtcaaaacg
      481 gcgcgaggcg atggccaaga gaataggctt cgacgcctac ggcacgacta aagacacgcc
      541 ggaccccatc gccaacgcta tcgattcgct gctggatcat atccattcga tggaaacgca
      601 gatcgaagcc atgcaaaagg ctatgcagga acacggcata gctatcccta agggtggcga
      661 ccgatcggcg gaaactcacc tacctacaga gacgcacctt ctttagctct ataaccaagc
      721 ttgcaactaa ggaatagagg ctggccgttg ccgagtttca gggaacctta agaaacaata
      781 gttgactaaa atagtcagct atgtaatgct gcaggtgcga aataattctt ccggtacata
      841 aggcgatact accatgcgat tgaccactaa aggccgctat gcggtgacag caatattgga
      901 cctcgccctt catcaggagc aggggcccgt tgcgctcgcc gccatctccc tacggcaagg
      961 gatctcttta gcctatctcg agcagttgtt tgcgcgcttg ggcaaaaagg cgctggtcaa
     1021 aagcgcgcgc ggcccgggtg ggggttatcg cttggggcgt ccggccggcg ccatatccat
     1081 cgccgaggtg atcagcgcgg tggatgaaag cgtcgatgct acccgctgcg gcggactcaa
     1141 gaactgtcag ggcgatcagc gctgtttgac ccacgatctg tgggaggatc tgagtatcca
     1201 gatctatagc ttcttaagcc agatcacgct ggcggaactg gtcgcgcggc gcagtgtgcg
     1261 cgctgtctcg gaacgccaag atagccaggt gatacatatc tctgtcccgc ggacacgtac
     1321 agttcgtgag gagagagggg tgaggagtga ggagtaacag gtgatacata tttctgtccc
     1381 gcggagcgtg cagcgctccg cttcactaaa taaacgtcat gagggggttg aaagatggga
     1441 attatcttga cagaacgcgc ggcctcgcat gtgaagcgct ttcttgccaa gcacggtacg
     1501 gccatggccc tgcgggtggg tgttaaacct accggttgtt ccggctatgc ctatgtggtc
     1561 gagccggctg caagcatagg ggaagaggat acggtgtttg aatcacaggg tgtgaaggtg
     1621 gtggtgaacg ccaagagcct gggttatctc accaacaccg aactcgatta tacccgtgag
     1681 ggcttaaatg aaggcttcaa attctataac cccaatgtta aagccacctg tggttgcggt
     1741 gaaagcttta acgtttaatc gataggaggc tctccaatgg caatccccca ctctcaatcc
     1801 atggaagcat tggtcaaccg gacctatgag gcgggctttt ataccgatct cgagtcggac
     1861 accgccccac ccggcttaaa cgaagacatc attcgcttga tctccgacaa aaagcaggag
     1921 cccgagtggc tactggaatg gcggctggcg gcccttcgtc actggctgac gatgacggag
     1981 cccaagtggg ctacggtgca gcatccgccg atcgactatc aggctatctc ttattattcg
     2041 gcccccaggt ccaagaacga tggaccgaag agcctggatg aggtagatcc caagctgctt
     2101 gagacctatg aaaaactcgg gatccccttg cgcgagcggg agttgctcgc cggggtcgcg
     2161 gttgatgcgg tgttcgacag cgtctctgtc gcgaccacct ttaaagagaa gctggcagag
     2221 gcaggcgtca tcttctgctc cttctcggag gccgtgcaaa ggcatccgga tctggtgcgg
     2281 caatacctcg gaac
//
LOCUS       DASQSL010000587         5320 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_73194, whole genome shotgun sequence.
ACCESSION   DASQSL010000587 DASQSL010000000
VERSION     DASQSL010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 5320)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5320)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5320
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73194"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..622)
                     /locus_tag="VE844_06005"
     CDS             complement(<1..622)
                     /locus_tag="VE844_06005"
                     /inference="COORDINATES: protein motif:HMM:NF019977.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase N-terminal domain-containing
                     protein"
                     /protein_id="HZC00914.1"
                     /translation="MRYRVVHKTDYTYAQPVALGHNETHLRPRSFESQRCLSHQLEIE
                     PQPELFSEREDFFGNRVSYFSIQHSHSRLSVTATSEVELQERVRPPAGAASRPWEETA
                     ARLKRECTSEVLDARPYVLDSPLASPSAEIARYAAVLFPPGRPLIEAVRELMERIHRD
                     FVYDPESTMVATPLSVVFEHRRGVCQDFAHLAIACLRSQGLAARYVS"
     gene            complement(624..1235)
                     /locus_tag="VE844_06010"
     CDS             complement(624..1235)
                     /locus_tag="VE844_06010"
                     /inference="COORDINATES: protein motif:HMM:NF016086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-E domain-containing protein"
                     /protein_id="HZC00915.1"
                     /translation="MICKDALDEVITTLAAFSGLMTETMIRGQSWLFLDMGRRLERAM
                     ALIAILRATVLVQHSASMDVPLLEAVLRQSASLITYRRRYHAVPELQAVFKLLITDVS
                     HPRALAYQLVRLQAHVESLPKGSQGHLGTEKQLLREAANALSLAHTGALNHFEDGKAL
                     RQALDPVLARIGQGLSQCSDTITQSYFADVHGLQQLLTHEAGS"
     gene            complement(1210..1419)
                     /locus_tag="VE844_06015"
     CDS             complement(1210..1419)
                     /locus_tag="VE844_06015"
                     /inference="COORDINATES: protein motif:HMM:NF016086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-E domain-containing protein"
                     /protein_id="HZC00916.1"
                     /translation="MPAVLAAIFDPDRFGTVVYDLHTAMQVAYAVRDRLDHDAWRVTH
                     TIRRHLQRLAELRRGPVGDLQGCAG"
     gene            complement(1430..3160)
                     /locus_tag="VE844_06020"
     CDS             complement(1430..3160)
                     /locus_tag="VE844_06020"
                     /inference="COORDINATES: protein motif:HMM:NF025761.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circularly permuted type 2 ATP-grasp protein"
                     /protein_id="HZC00917.1"
                     /translation="MADSTASDLLATQYCPPAGAYDELCTGAGQVRAHWQYLTQALGA
                     LGPVELERRSEEVRRLLREYGVTYHVYGDPQGKERPWDLDPIPLLISSQEWAGIESGL
                     VQRAEVLNLVLKDIYGPRELIKKGLIPLELIYAHRGFLRPCAGIRSNRAYELTLYAAD
                     LARGSDGRVCVLSDRTQAPSGLGYALANRVVISRILPSLFRDAQVHRLALFFHSLRIT
                     LVALSPEREEEPHIVVLSPGPLNETYFEQGYLASYLGYPLVQGDDLSVVNGRVWLRSL
                     QGLEPVDVILRRVDDHYCDPVELLPDSRLGVPGLVEATRRGAVAVVNPLGSSVLENPG
                     LDAYLEAIAHYFLGQALELPSVPTWWCGNPEGQSHVLANLDKLVIKPIYRGFGTRPVF
                     GPLLSAKERMIWSERIRLHPHAYVGQELIHLSSTPALLDSRIVACQTLLRSFLVARAD
                     GYVVMPGGLTRIAPDRGPCIISNQTGAISKDTWVLASEPEKQVSLRIPQARPAALNPH
                     RILASGAANNLFWLGRYTERAEQNLRLLRTVLDIGNNALEFGEGHQRACTGELLRTRE
                     AHKYPCVRER"
     gene            complement(3246..4205)
                     /locus_tag="VE844_06025"
     CDS             complement(3246..4205)
                     /locus_tag="VE844_06025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002690706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-E domain-containing protein"
                     /protein_id="HZC00918.1"
                     /translation="MLLSRVAERLYWMGRLLERAEDTARIVNVNAHLLLDLPKGTAFG
                     WEPLLFIIGAEELFYHHYQKADETSVVKFMLVDRDNPSSILSSLHCARENLRTTRDIV
                     PRKAWEKLNDLYQYAKDPIEHTRRARYAFLTRVIEGSQLISGLLAGTMSHDQAYDLVR
                     IGRNLERTDMTSRIIDIRSANLVVKHTGGLIPFASIQWMSVLKSLSAHQMYRRHVHAR
                     VNGTAVLRFLLQDPRFPRSVYHCLGEMQQSLNNLPHHEVPWRHVVRLRRQVHDAKIEA
                     LIDEGLHEFIDGLQIALGKLHDRIQASYFLTEAPGPKSSSMAA"
     gene            complement(4208..4387)
                     /locus_tag="VE844_06030"
     CDS             complement(4208..4387)
                     /locus_tag="VE844_06030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00919.1"
                     /translation="MTEYKWYVDCTSTFKYYLGKETNVLTYLCINDPERTYVPVNLDQ
                     RIVKPTTPIIEGAGE"
     gene            4667..>5320
                     /locus_tag="VE844_06035"
     CDS             4667..>5320
                     /locus_tag="VE844_06035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018953198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HZC00920.1"
                     /translation="MAAKTLYDKLWDAHVVRHYEDGTALIYIDRHLLHEVTSPQAFEG
                     LKLAGRTPWRLDANLAVSDHNVPTIDRKHIRDPISRLQLETLDANCREFGIPQFSIQD
                     IRQGIVHVIGPEQGFCLPGMTVVCGDSHTSTNGALGALAFGIGTSEVEHVLASQCLIL
                     KRSKNLLVQVDGQLGFGVTAKDLILAIIGAIGTAGGTGYTIEFAGEAIRALSMEERMT
                     "
BASE COUNT         1050 a         1565 c         1654 g         1051 t
ORIGIN      
        1 cgcttacgta ccgtgccgcg agaccctggc tgcggaggca agcgatggcg aggtgggcaa
       61 agtcctggca gacaccacgg cggtgttcga acactaccga gagcggggta gccaccatgg
      121 tggattctgg gtcatagacg aaatcgcgat ggatgcgctc catcaattcg cggacggcct
      181 caatcagtgg gcgtccgggt gggaataaca ccgcggcata gcgtgcgatc tcggcggagg
      241 ggctcgcgag cggtgaatcc agtacatacg gacgggcgtc gagaacctcc gaggtgcact
      301 cccgctttaa ccgagccgct gtctcctccc agggacggct tgctgcaccc gcgggcggcc
      361 gcacgcgttc ttggagttcc acctcactgg tcgcggtgac cgataaccgg ctgtggctgt
      421 gctgaatgga gaaatatgag acccgattgc cgaagaaatc ttcccgctcg gagaagagct
      481 caggctgagg ctcgatctcc aactggtggc tcagacaacg ctgggactcg aagctgcgtg
      541 gacggaggtg ggtttcgtta tggcccaggg cgaccggttg cgcataggta tagtcggtct
      601 tgtgcaccac ccggtagcgc atctcaggat ccggcttcgt gcgttagcag ttgctgcagg
      661 ccgtgcacgt cggcgaaata gctctgcgtg atcgtgtcgg agcactgcga gagcccctgg
      721 ccgatccggg ccaatactgg atcaagcgcc tggcgcaacg ccttgccgtc ctcgaagtgg
      781 ttcagtgccc cggtgtgggc gaggctcaat gcgttagcgg cctcccgcag cagctgtttt
      841 tccgtgccca ggtggccttg ggagcctttc ggcagcgact cgacgtgcgc ttgcaggcgt
      901 acgagctgat aggcaagcgc gcgcggatgg ctcacgtcgg taatgagcaa tttgaagacg
      961 gcttggagct ccggcaccgc atgataacgg cggcggtagg taatgagact tgcactctgg
     1021 cgcaagacgg cttcaagcaa aggcacgtcc atggacgccg aatgctgcac aagcacggtg
     1081 gcgcgcagga tagcgatcag ggccatagcc cgctccaggc gccggcccat atcgaggaat
     1141 aaccagctct ggccccggat catggtctcc gtcataagcc cggagaacgc cgccagggta
     1201 gtgatcactt catccagcgc atccttgcag atcaccgaca gggccccgcc tgagctcggc
     1261 gaggcgctgc aggtgtctgc ggatagtgtg ggtcactcgc caggcgtcat gatccagacg
     1321 gtcgcggacg gcataggcca cctgcatggc cgtatggaga tcgtagacca cagtcccaaa
     1381 gcgatcgggg tcgaagatcg cggccaggac tgccggcacc ccctccggat catcgttcgc
     1441 ggacacaggg atatttgtga gcctcgcgag tccgtagcag ctcgcctgtg caggcgcgct
     1501 gatgtccttc gccgaattcg agtgcattgt taccgatgtc gagcacggtc cgcaggagcc
     1561 ggagattctg ctcggcccgc tcggtatagc gtccaagcca gaacaggtta ttggctgcac
     1621 cacttgccag tattctgtgc gggttcaatg ccgctggccg cgcttgaggg atccgcaggc
     1681 tcacctgttt ctccggctcg gaggccagca cccaggtgtc cttgctgatg gcgccggtct
     1741 ggttagagat gatgcaggga ccgcgatccg gcgcgatgcg ggtgagacct ccgggcatca
     1801 ccacgtaacc gtccgcgcga gccacgagaa aactgcgcag cagcgtctga caggccacga
     1861 tcctcgagtc gaggagcgcc ggggttgacg acaagtggat caattcttgg cccacgtagg
     1921 cgtgcggatg caggcgtatg cgttcgctcc agatcatccg ttccttcgca ctcagtaacg
     1981 gcccgaacac cgggcgggtg ccgaaccctc ggtagatcgg tttgatcacg agcttatcga
     2041 ggttggcgag gacgtgactt tgcccctctg ggttcccgca ccaccaggtc ggtaccgatg
     2101 gcagctcgag cgcttgccca aggaagtaat gcgcgatcgc ctctagatac gcatcgagcc
     2161 ccgggttctc aagcacgctg ctgccgagcg gattgaccac agccacggct ccccggcgcg
     2221 tggcctcgac cagccccggt acccccaggc gcgaatccgg gagaagctca accggatcgc
     2281 aataatgatc atcgacgcgc cggaggatga catccaccgg ctcaagaccc tgtagtgaac
     2341 gcagccatac ccggccatta accacactga gatcatctcc ttgcaccagg gggtatccca
     2401 ggtagctcgc gagatacccc tgctcgaagt aggtctcgtt gagcggaccc gggctcagca
     2461 ccacgatgtg cggttcctct tcccgctctg gactgagcgc cacgagggtt atgcgcaggc
     2521 tatggaagaa cagtgccagg cggtgaacct gggcatcgcg gaacaggctc ggcaggatac
     2581 gtgagatgac cacccggttt gcgagcgcat acccgagtcc cgagggtgcc tgggtgcgat
     2641 cgctcaacac gcatacacgc ccatcggacc cccgcgcgag atcggcggca tagagcgtca
     2701 actcgtacgc ccggtttgag cgaataccgg cgcaaggccg cagaaaacct ctatgggcat
     2761 agatgagctc tagagggatc aggccctttt ttatgagctc gcggggacca tagatatctt
     2821 tgagcaccag gttcaagacc tcggcgcgct gaaccagccc ggattcgatg ccggcccact
     2881 cttggctact gatgagtagt gggatgggat cgagatccca gggacgctcc ttcccctgag
     2941 ggtccccgta aacgtgatag gtgacaccgt actcgcgtag caagcgccgg acctcttctg
     3001 agcgccgctc aagttccacc ggcccgagcg ccccgagcgc ctgggtcaaa tactgccagt
     3061 gggcacgcac ctgacctgcc cccgtgcaca gctcgtcgta ggcacccgca gggggacagt
     3121 actgggttgc gagaagatcg gatgcagtac tatccgccat cagatccacc tcggcggtag
     3181 tgggtcttat ggtttacgat gacacgtata gccatatcat gatcctcggc tgagaacagc
     3241 gcgcctcaag cagccatgga gcttgatttg ggccctgggg cttcggttag aaaatagctt
     3301 gcctgtattc gatcgtgcag tttgccaagc gcgatctgta gtccatcgat gaactcgtgg
     3361 agtccctcgt cgatgagcgc ctcgatcttg gcatcgtgta cttggcgcct gaggcggacc
     3421 acgtggcgcc aggggacctc atggtgtggg agattattga gactttgctg catttcgccc
     3481 aggcagtggt aaaccgaccg cggaaagcgc gggtcctgca gcagaaagcg caggaccgcc
     3541 gtgccgttca cccgcgcatg gacatggcgg cgatacatct gatgggccga taaggacttc
     3601 agcacgctca tccactggat gcttgcaaac gggatgaggc cgcctgtgtg cttcactacg
     3661 agattggccg agcggatatc gatgatccgg ctggtcatgt cggtgcgctc cagattgcgg
     3721 ccgatccgca caagatcata ggcctggtcg tggctcatgg tgccagcaag caagccgctg
     3781 ataagctggc tgccctcgat gacgcgggtg agaaacgcat aacgcgcgcg ccgggtgtgc
     3841 tcgatcgggt ccttggcgta ttgatacagg tcgttgagct tctcccaggc cttccgcggc
     3901 acgatatcgc gggtggtgcg caggttttcc cgggcgcagt ggagcgatga gagaatcgag
     3961 ctcgggttgt cccgatcgac cagcatgaat ttcaccacgc tggtctcgtc ggccttctgg
     4021 tagtggtggt agaacaattc ctcggctccg atgataaaga gcagcggctc ccagccaaag
     4081 gccgtgccct ttggcagatc caacagcaga tgcgcattga cgttgacgat gcgcgcggtg
     4141 tcttccgcgc gctcgagcaa gcgccccatc cagtaaagcc gctctgccac gcgcgatagc
     4201 agcatcctca ttcccctgcg ccctcgatga tcggggtggt cggtttgacg atccgctggt
     4261 cgagattgac cggtacatat gttcgctccg ggtcattgat acagagatag gtgagcacgt
     4321 tggtttcctt gccgagatag tatttaaacg tgcttgtgca atccacatac cacttgtact
     4381 ctgtcaataa tattaatctg ctgggatgcc cgccctagac tgcctcccct gctcttagta
     4441 attataaggc ggcgtacagc ttatgagaat cctttcgtat gaatcgcttg gtcggatcat
     4501 cttcccgtat ccacggcagg atggtcggtt tggtgcaaaa tggcggtcga ttgcacgagg
     4561 tcggggcacc atgagtacac tatccagcgc caactgaccg tggtcattga aaaccagcgt
     4621 ggtatataat aactcaagcc tcaagcttag agattgaatc attccgatgg cagctaagac
     4681 cttatacgac aaactctggg acgcccatgt ggtccgccac tatgaggatg gcacggcctt
     4741 gatctacatc gatcggcatc tcctccatga agtgacctca ccgcaggcct tcgagggact
     4801 gaagctggcc gggcgcacgc cctggcgcct ggacgccaat ctggccgtgt ccgatcacaa
     4861 cgtgcctacc atcgaccgta aacatattcg agatcccatc tcccggctgc agctcgagac
     4921 cttggacgcc aattgccggg agttcggcat tcctcagttt agtatccagg atatccgcca
     4981 ggggatcgtt catgtgatcg ggccggagca aggattctgc ttgccgggga tgacagtggt
     5041 gtgcggtgac tcacatacct ccaccaacgg ggcgctgggg gcgctggcct ttgggattgg
     5101 gacctcggag gtggaacatg tgcttgccag ccagtgtctg atcttaaaac gatctaaaaa
     5161 cctgctcgtg caggtcgacg gccagcttgg cttcggggtg accgccaagg acctgatcct
     5221 cgccatcatc ggcgcgatcg ggacggccgg gggcaccggc tataccatcg agtttgcggg
     5281 ggaggctatt cgggcgctct ccatggaaga gcggatgacg
//
LOCUS       DASQSL010000588         1542 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_99811, whole genome shotgun sequence.
ACCESSION   DASQSL010000588 DASQSL010000000
VERSION     DASQSL010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99811"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1476
                     /locus_tag="VE844_06040"
     CDS             <1..1476
                     /locus_tag="VE844_06040"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZC00921.1"
                     /translation="HLSSWDLVDGRMVIVPGIASKWELSNDGKTTTFTIREGAKFHDG
                     TEITAEDVLWTFQHGMGPQAKEYSKSSPGINYSTLMDRIEQTGPDQVSVTTKVPTPEL
                     AVYISENEGGATQGQVMPKRANLHTQQDMEADDSNPIGAGPGKVVDHIPLQSIKFERF
                     EDFYYQPENGFPTDKRYKFTELELHQIPEEATRAAAMQAGEADIARVSLATRQQVEDG
                     GGRLVFSGESAIIESHLWGCWKPDYPCSDIRVRQALNYAIDKELMRDRLFGPEVMEIK
                     GWWVVTPSTIGYSPELAPFPYDPDKARQLLAEAGYKTPTNPSGKDFGKLIINTYEDPV
                     IPNLIESAQLTGDLWRRELGLDVEVRVMDKEIFTQTRTLTFEEFDGTVSWVAQNTRLD
                     ATGVARQYFLDLQKGGPSTRVHSDPKLFALMEETVASSITDQERIEEIFNSTYRQLQE
                     EAYQISVGYINAPWGVGPRIVAWEPYRVAEYASAMHTIILK"
BASE COUNT          376 a          406 c          453 g          307 t
ORIGIN      
        1 cacctcagct cctgggatct tgtggatggg aggatggtga tagtccctgg cattgccagc
       61 aagtgggaat tatccaatga tggcaagacc acgacattta ccataaggga gggagccaag
      121 ttccacgacg gaacagagat aacggcggag gatgttttgt ggaccttcca gcatggcatg
      181 gggcctcaag ctaaggagta ctccaagagc tcgcccggca tcaactattc caccttaatg
      241 gaccggatag agcagacggg gcctgaccag gtcagtgtaa ccaccaaggt tcccacccct
      301 gagttagcgg tttacatttc tgagaatgag gggggagcta cccaaggcca agtcatgccc
      361 aagcgggcga acctgcacac tcagcaggat atggaggctg atgactccaa tcctatcggt
      421 gccggccccg gcaaagtggt ggatcacatc ccgttgcagt caattaagtt cgagcggttc
      481 gaagacttct actatcagcc cgagaacggc ttccccacgg ataaacggta taaattcaca
      541 gagttggagc tacatcagat cccagaggaa gctactcggg ccgcggctat gcaggctgga
      601 gaagcggata tcgctcgtgt tagcctggcg acgcgccagc aagtcgagga tggcggtggg
      661 cgcctggtgt tcagtgggga atccgcaatt atcgaatccc acctgtgggg ctgctggaaa
      721 cccgactacc cttgctccga catacgggtc cgccaggccc tcaactacgc cattgataag
      781 gaactgatgc gggaccggct ctttgggcct gaggtgatgg agataaaggg gtggtgggtt
      841 gttaccccca gcaccatcgg gtacagccca gagctggccc ccttccccta tgaccctgac
      901 aaggctcgcc aactgctggc agaagcaggt tacaagactc caaccaaccc ttcgggcaag
      961 gacttcggga agttgattat aaacacctat gaagacccgg tgatccccaa cctgattgag
     1021 tcagcgcaac tgaccggcga tctctggagg cgggagctgg ggctggacgt ggaagtgagg
     1081 gtgatggata aagagatatt tactcagacc cgcaccctta ccttcgagga attcgacggt
     1141 acggtctcgt gggtcgccca aaacaccaga ttagatgcga cgggagtcgc gcgacaatac
     1201 ttcttggatc tacagaaggg aggaccatca acgagggtgc acagcgaccc caagttgttt
     1261 gccctgatgg aagagaccgt agcctcgagc atcactgatc aggagcggat cgaggaaatc
     1321 ttcaatagca cgtaccggca gctccaggaa gaggcttatc aaatatctgt gggctatatt
     1381 aatgctccct ggggtgtggg accccgtatc gtggcctggg agccctaccg ggtggccgag
     1441 tatgcttcgg ccatgcacac cataatcttg aagtagccgt ttcgccggtt cccggggatg
     1501 actaacgtgt gtgattcata gagatcgcaa ttcacaacta ag
//
LOCUS       DASQSL010000589         1664 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_141825, whole genome shotgun sequence.
ACCESSION   DASQSL010000589 DASQSL010000000
VERSION     DASQSL010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1664
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141825"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..258)
                     /locus_tag="VE844_06045"
     CDS             complement(<1..258)
                     /locus_tag="VE844_06045"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC00922.1"
                     /translation="MVAAEVDPKRLVFVDEMGVHTSLASLYGYSRKGERVHLQVPRNR
                     GKNTTLLASITLSGMGETMAVEGSTDREVFDAYVEHVLAPTL"
     gene            complement(276..653)
                     /locus_tag="VE844_06050"
     CDS             complement(276..653)
                     /locus_tag="VE844_06050"
                     /inference="COORDINATES: protein motif:HMM:NF013842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 transposase-related protein"
                     /protein_id="HZC00923.1"
                     /translation="MKAYSKDLREKIVDAIGRGMPKAQAARTFGIGISTVKRYASKAQ
                     RGEPLEPGKAPGKRPKMDERLSKLLKEDLKERPFATLRERCDYVKAISGLSVSRSTMC
                     RAIARIGSTRKKGDKAPQSETNS"
     gene            727..1059
                     /locus_tag="VE844_06055"
     CDS             727..1059
                     /locus_tag="VE844_06055"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family protein-serine/threonine
                     phosphatase"
                     /protein_id="HZC00924.1"
                     /translation="MEEDAVVAIDVESTGLVQVNETLLTRIPPNMFVTCFYAILDPES
                     ATLSYANAGHDLPYLRRRGGDCEELRARGMPLGLMPGMGYEQKQIVLERDDSALFYSD
                     GLVEAPRP"
     gene            1067..1225
                     /locus_tag="VE844_06060"
     CDS             1067..1225
                     /locus_tag="VE844_06060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00925.1"
                     /translation="MFGFPRLRALVAEHGEERSLGNFLMEELYSFVGEGWEQEDDITL
                     LPLERSAT"
     gene            1408..>1664
                     /locus_tag="VE844_06065"
     CDS             1408..>1664
                     /locus_tag="VE844_06065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00926.1"
                     /translation="MKNTAFAGFLSLVRSSPVVDVFVVNVVFKQQKRENDGSQKQERG
                     RMGDTRDLQLVRVEINLEEFPVFLPRKAMRRGSYAFERTIEG"
BASE COUNT          345 a          439 c          491 g          389 t
ORIGIN      
        1 caaggtaggc gccaagacgt gctctacgta agcatcgaag acttctcggt cggtggagcc
       61 ctcaacggcc atcgtctcgc ccatcccgct aagggtgata gaggccaaaa gcgtggtgtt
      121 tttgccgcga ttgcgtggaa cctgcaggtg cacgcgttcg ccttttcgag agtaaccata
      181 cagggacgcg agggaggtgt gcactcccat ttcatctacg aacaccagcc gcttggggtc
      241 gacctccgcg gccaccataa cccgccaggc tgcccttacg aattcgtctc gctctgtggc
      301 gctttgtccc cctttttgcg cgtggaacct atccgagcta tggcacggca catggtggag
      361 cggctcacag aaagtccgct tattgccttt acatagtcgc aacgctcccg aagggtggcg
      421 aacgggcgct ccttgaggtc ctctttgagg agcttgctga gtcgctcatc catcttgggt
      481 cgtttgccgg gtgccttacc tggctccagg ggttcccccc tttgggcctt ggaggcgtaa
      541 cgcttgacgg tcgagatccc aatcccgaag gtgcgcgccg cctgggcctt gggcatgcct
      601 cgtccgatgg cgtccacgat cttctcacgg aggtctttgg agtacgcttt catcgcttca
      661 tgttgacatg cagcccatcc tcatcgcaac acgctgtatg ggtccaacct gtcatatttg
      721 gaaaacttgg aagaagacgc ggtggtagcc attgacgttg aatctacggg actggtccaa
      781 gtcaacgaga cgttgctaac tcgcatccct cccaacatgt tcgtcacctg cttctatgcc
      841 atcctcgacc cagagagcgc aaccttgagc tacgcaaacg ctggccacga cctgccctac
      901 ctccgccgcc gtggtggcga ttgcgaggag ctaagggcta gggggatgcc cctaggtttg
      961 atgccgggga tgggctacga gcagaagcag atcgtcttag agagggacga tagcgccctg
     1021 ttctacagcg acgggctagt agaggcccca cgaccctaaa ggcgagatgt tcggcttccc
     1081 gaggcttcgt gccctcgtcg ccgagcacgg tgaggagcga tcattaggga acttcctcat
     1141 ggaggagctc tactccttcg taggggaggg ctgggagcag gaggacgata tcacactgct
     1201 gccgctggag cgctccgcga catgaagcag aacttccgag aattccatac tttccacgca
     1261 cttggatgaa tacggacatc gtggaagtaa aaatgtcctc ttctcttgca gggaaatctg
     1321 cccgtgttgg ggtttggggg gtagcaatat tggggtttag gggatagttt cgtccttcca
     1381 tgttggggtt taggggatag tttgtagatg aaaaatacgg cttttgcagg atttttgtct
     1441 cttgtaagga gctcccctgt tgttgatgtt tttgttgtta atgttgtatt taaacaacag
     1501 aaaagggaaa atgacggtag ccaaaaacaa gagaggggga ggatgggcga cacccgagac
     1561 ctgcagctgg tcagggtcga aattaacctt gaagaattcc cagtattttt gcccaggaag
     1621 gccatgcgca ggggatccta tgcctttgag cgtacgatag aggg
//
LOCUS       DASQSL010000590         6876 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_73203, whole genome shotgun sequence.
ACCESSION   DASQSL010000590 DASQSL010000000
VERSION     DASQSL010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 6876)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6876)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6876
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73203"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..436
                     /locus_tag="VE844_06070"
     CDS             <1..436
                     /locus_tag="VE844_06070"
                     /inference="COORDINATES: protein motif:HMM:NF013842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS630 transposase-related protein"
                     /protein_id="HZC00927.1"
                     /translation="GLESMRAYSMDIRERVIEDLDQDSMRKTAKRFRVSDYFVYRLKR
                     RYKEAGTLAPKLHGGGHGPLVDEGGGEFIRGVLAEAPDLTLNELCERYEGRFGRAVSK
                     SSMDRALRRLNVTRKKRPATTQSKRASVSNKSVRPIGRDYRP"
     gene            824..1069
                     /locus_tag="VE844_06075"
     CDS             824..1069
                     /locus_tag="VE844_06075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010653609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HZC00928.1"
                     /translation="MNDRNRLQWRCRRGIRELDLLLRRFLEQGYDRLSHEDKRMFEYL
                     LDQNDPDLLGWLMGNSDPPQENTRRLVADIRATVLNG"
     gene            1062..2090
                     /locus_tag="VE844_06080"
     CDS             1062..2090
                     /locus_tag="VE844_06080"
                     /inference="COORDINATES: protein motif:HMM:NF013720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein"
                     /protein_id="HZC00929.1"
                     /translation="MDSFEWRQFLCEQGARFDGGRVIDFGDPALERAQVFQGNIIADL
                     SHYGLIEVTGKDAETFLAAQFTSDIRQISESASQLSAWCIPQGRVLAVFRIFQRAGAY
                     YLLLPGELLEVILRRLRMYILRSDIRLADASSTLVRIGLSGPALPGFLAEAFKELPAN
                     PNQCLQNGAYTLLCLPGSSARFIVISDPGAAKKLWLDRQENAIPTGAGPWTLLEILAG
                     IPSVHPKTTEAFLPQMLNLEALGGLCFSKGCYPGQEIIARLQYRGQLKRRMYLGLANT
                     TLIPEPGDEVVSGDSEETQRVGTVVAAERHPQGGAALLAVLEIGAAQGKLCLYEPGGP
                     ALILQSLP"
     gene            2179..2919
                     /locus_tag="VE844_06085"
     CDS             2179..2919
                     /locus_tag="VE844_06085"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007801747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HZC00930.1"
                     /translation="MAIKTPSEPSSEETRIAARCAEMIAQIETEARSTADYTGRSRFD
                     SRVLAAIKRVPRHEFVPASEKDMAYLNIALPIGHGQTISQPYIVALMTDLLALEPDAV
                     VLEIGTGSGYQAAVLAQMVRQVYSVETIPAIAAKAKARFTRLGFTNIEVRVGDGYYGW
                     PEHAPFDGIVVTAAAPQIPPLLVEQLKPGGRLVIPLGRPLDRQDLTLAEKSEDNQLSL
                     RSVLPVAFVPFQQGRSIEPVEQEGENSW"
     gene            2913..3344
                     /locus_tag="VE844_06090"
     CDS             2913..3344
                     /locus_tag="VE844_06090"
                     /inference="COORDINATES: protein motif:HMM:NF037928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host attachment protein"
                     /protein_id="HZC00931.1"
                     /translation="MVKRWIVVAESSRARIFTMEGPLAPLRELEDLSHPEARLPGREL
                     KSDRTRVFRGRGQENHPGEPNVEPKQQEAIQFARQISERLEQARTKGELEGLVLIAPP
                     AFLGLLRQNLSAATEKHLIKSIDKNLVQMSEREIREYVVEG"
     gene            complement(3376..5406)
                     /gene="uvrB"
                     /locus_tag="VE844_06095"
     CDS             complement(3376..5406)
                     /gene="uvrB"
                     /locus_tag="VE844_06095"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012638323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HZC00932.1"
                     /translation="MNKRLELDSPYPPAGDQPEAIKQLVEGLRAGLAHQTLLGVTGSG
                     KTYAIAHVIHAVQRPTLILAPNKTLAAQLYGEMRGFFPNNAVEYFVSYYDYYQPEAYV
                     PASDTYIEKDATINEHIEQMRLSATKALLERRDTIIVATVSSIYGLGDPSEYHSMVLH
                     LVRGDALDQRFLLRRLAELQYTRNDVELQRATYRARGDIIDIFPAESEREAVRVELFD
                     DTIESLAYFDPLTGELLRRVPRLTIYPKSHYVTRREVVLDAIEQIKADLSVRLEELRK
                     ANKLVEAQRLEQRTRFDLEMMLEIGYCTGIENYSRYLSGRRPGEPPPTLFDYLPKQAL
                     LVVDESHVTIPQLGGMYRGDRSRKETLVEYGFRLPSALDNRPLRFDEFERLSPQTLYV
                     SATPGPYELEYSGQIVEQVVRPTGLIDPKVEIRPAATQVDDLLSEIHRRVAVRERVLV
                     TTLTKRMAEDLTDYLAEHGIRVRYLHSDIDTVERVEIIRDLRLGRFDVLVGINLLREG
                     LDIPEVALVAILDADKEGFLRSERSLIQTVGRAARNIKGQAILYAEHMTGSIERALAE
                     MERLRHKQMEYNRVHGITPRGIEKAVTDVMEGAYREPGATYRYTVAEEAPEYRTLSPE
                     TALRKIKQLEEKMYRHARDLEFEEAAKLRDEIARIRTACLGGPALGVSQEIR"
     gene            5484..6674
                     /locus_tag="VE844_06100"
     CDS             5484..6674
                     /locus_tag="VE844_06100"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020161987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HZC00933.1"
                     /translation="MHVKLADRALTIKPSPTLSVSARAAALKAAGKAIISLAAGEPDF
                     DTPEPIKAAAIQAIQEGFTKYTAVEGTPGLRRAIAAKLKRENTLDYTPEQILVSAGCK
                     HSIYNLLMALLNPGDEVIISAPYWASYPDMVKLTGAEPVIIKTGLEDNFKINQAQLEA
                     AITPKTRLLILNSPSNPTGEYYTREALLKLGEVLLEHPGIVIASDDIYEHILWHAQPF
                     ANILNACPTLYDRTVVLNGVSKAYAMTGWRIGYAAGPKPLIQAMADLQSQSTSNPTSI
                     AQIAAQAALEGDQGSVREQCKVFKQRHDFVYTRLNQLKGVKCLPAQGTFYVFPTMEGV
                     IAGIDGVDEDIALAEYFLEKAGLAMVPGSAFGAPGYMRLSFATSLDNLKRAMDRLEGL
                     LGKG"
     gene            6763..6838
                     /locus_tag="VE844_06105"
     tRNA            6763..6838
                     /locus_tag="VE844_06105"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6796..6798,aa:Asn,seq:gtt)
BASE COUNT         1518 a         1932 c         2012 g         1414 t
ORIGIN      
        1 ggggttagag tccatgagag cctactcgat ggatatacgg gaacgggtca tagaggatct
       61 ggaccaggac tcgatgagga agacggcgaa gcggtttcgg gtttcggact actttgtcta
      121 ccggctcaag cggcggtata aagaagcggg cacgctggct cccaagctgc atgggggagg
      181 gcacggcccg cttgtggatg aggggggtgg ggaattcatc cgtggagtgc tggccgaggc
      241 gccggattta acgctcaatg agttatgtga gcgatatgag gggagattcg ggcgcgcggt
      301 cagcaaatcc tcgatggacc gagcgctgag gcggttaaat gtaacacgaa aaaaaaggcc
      361 tgctacgacc caaagcaaaa gagcgagcgt gtccaacaag agcgtgcggc ctatcgggag
      421 ggattaccga ccttaaaggc ggaggaggcc atcactctgg atgagagggg agcggctacg
      481 aatctcacgc ccctgggggg gcgttcgctg ccgggggagc gggtgtacgg ggccaagccc
      541 acggcgccgg ggaagcgcat cagcacagca ggcactacaa actctctctc caacagatgc
      601 caaaggcttc ttcaagcatg tcggattttc tatatgatcc atccgggaac cgctatacat
      661 ggcgatggaa ttaagccagc aattctcatt ttggcggagc cctagccagt cttgggtttg
      721 ggagccagcg tagcctggat agagcgaaac gggatccggg ataatacggt acatggtata
      781 ctgcttaggt aacaccgcac ttaaccggta ggggagggga tagatgaacg atcgtaaccg
      841 gctccaatgg cgttgccggc gaggtatacg cgagctcgat ctgctgttaa ggcgctttct
      901 tgagcaagga tacgaccggc tttctcatga agacaagcgg atgtttgagt atctgctcga
      961 ccagaacgat ccggatctct taggctggtt gatggggaat agcgatcctc ctcaagaaaa
     1021 cacgcggcgg cttgtcgctg atattcgagc aacggtatta aatggatagt tttgaatggc
     1081 gacagtttct ctgtgagcag ggcgcacggt ttgacggtgg gcgggtaatc gatttcggcg
     1141 atcctgcctt agagagagcg caggtcttcc aagggaacat catcgccgat ctgtcccatt
     1201 atggtctcat cgaggtcacc ggcaaagacg cagagacctt cctcgctgcc caattcacca
     1261 gcgatatccg gcagatctcg gagagcgcga gccaactgag cgcctggtgc atacctcaag
     1321 ggcgtgtgct tgccgttttc aggatattcc agcgtgcggg ggcgtattat ctgctgttgc
     1381 ccggcgaatt gctggaggtg atcctgcgcc ggttacggat gtatatcctg cgttcggaca
     1441 tcaggctcgc tgacgccagc agcaccttgg tcaggatcgg cctgtcgggt ccggcgctgc
     1501 caggattctt ggcagaggca tttaaggaac tcccagcaaa ccctaaccag tgcctccaga
     1561 acggagccta caccctgctc tgtctgcctg gctcctctgc ccgctttatc gtcatcagcg
     1621 acccaggcgc tgccaagaaa ctttggctcg atcggcaaga gaacgctatc cccaccgggg
     1681 cagggccatg gacactgctc gagatcctgg caggcatccc gagcgttcac cccaaaacca
     1741 ccgaggcctt tctacctcag atgctcaatc tcgaagcgct cggggggctc tgcttcagta
     1801 aaggttgcta tcccgggcag gagatcatcg cccggcttca ataccgaggc caactcaaac
     1861 gccggatgta tctagggctc gcaaacacaa cgcttatccc tgaacctggc gatgaagtag
     1921 tcagcggtga tagcgaagaa acccagaggg tcggcaccgt agtcgctgcc gagcgccatc
     1981 cccagggcgg ggccgcgctc ttggcggtgc tcgagatcgg cgccgctcag ggtaagctct
     2041 gcctctatga gccaggcggt ccagccctta tccttcaatc ccttccttga aagagagcgt
     2101 gatagtcgat acggcttaat aattttaaaa taggtatata atcatcggta aacagctgcc
     2161 ggcacacggg tagcatttat ggctataaaa acaccatcag aaccaagttc agaggaaacg
     2221 cgcatcgccg cacgctgcgc ggagatgatc gcgcagattg aaaccgaagc gcgatcaacg
     2281 gcggattata ccggccgatc ccggtttgat tcgcgggttt tagcggcgat aaaacgggtc
     2341 ccgcgccatg aatttgtgcc cgcttcagaa aaggatatgg cctatctcaa tatcgcactt
     2401 cccatcggtc atggacagac gatttcccag ccttatatcg tggccttaat gaccgatctg
     2461 ctcgcgctcg agccagacgc ggtcgtgctc gagatcggta caggctcggg ctaccaagct
     2521 gcggtgcttg cccagatggt gaggcaggtc tattcggttg agaccatccc ggccatcgct
     2581 gccaaggcca aggcgcgctt cacgcgcttg ggcttcacca acatcgaggt gcgcgtgggt
     2641 gacggttact acggttggcc ggaacatgcc ccgttcgacg ggatcgtggt cactgctgcc
     2701 gcccctcaga tcccgccttt gctggtcgaa caattgaagc ccgggggccg gttggtgatc
     2761 ccgctcggtc gcccactgga tcgccaggat ctcaccttgg ccgagaagag cgaggataat
     2821 caactgagcc tgcgctcggt attgcccgtc gcctttgtgc catttcaaca ggggcgctca
     2881 atcgaaccgg tggaacaaga gggggaaaat tcatggtaaa aaggtggatc gttgtcgcag
     2941 agagcagccg agcgcggatc ttcacaatgg aaggaccgct tgctccactg cgtgaattag
     3001 aagacttatc tcatcccgag gcgcggctgc ctggcaggga attgaaatca gaccgcaccc
     3061 gagtgttcag aggccgcggc caggaaaacc atcccgggga acccaacgtg gaacccaaac
     3121 agcaagaggc tattcagttt gcacggcaga tcagtgagcg gctggaacag gctcgcacca
     3181 aaggggaact tgaagggtta gtgcttatcg cgcctccggc ttttctcggg ttgttgcggc
     3241 agaacttgag cgccgctacc gagaagcacc tgatcaagag catcgataaa aatctggtac
     3301 agatgagcga gagggagatc cgcgagtatg tagtagaagg ttaggaggct ctatcgtgct
     3361 cacactgtgc aagatttacc ttatttcctg agaaacaccg agcgcgggac cacccaggca
     3421 ggcggtgcgt atccgcgcga tctcgtcccg cagcttagcc gcctcttcaa actccagatc
     3481 ccgagcgtgg cgatacatct tctcctccaa ctgcttgatc ttccggaggg cagtctcagg
     3541 tgacaaggtc cggtactcag gcgcctcctc cgccaccgtg taacggtagg tggcgcccgg
     3601 ttcgcggtaa gccccctcca tgacgtcggt caccgctttt tcgatgcccc gcggggtaat
     3661 gccatgcacg cggttatatt ccatctgctt gtggcgcagg cgctccatct ccgcaagcgc
     3721 ccgctctatg gaaccggtca tatgttcagc atagaggatc gcctggcctt tgatattccg
     3781 cgctgcccgg cccaccgtct ggatcagcga acgctcggag cggagaaacc cctctttgtc
     3841 ggcatcgagt atcgccacca gcgcgacctc ggggatgtcg agcccttcgc gcaacaggtt
     3901 gataccgacc aggacatcaa acctgcccaa tcggagatca cggatgatct caacccgctc
     3961 taccgtatcg atatccgagt gcaggtaacg gacgcggatc ccatgctcgg cgagataatc
     4021 ggtgagatcc tcggccatgc gtttggtcag ggtcgtgacc aggacccgct cacggacggc
     4081 cacccgccga tggatctccg atagcagatc atcgacctgg gtcgccgccg gccggatctc
     4141 gaccttgggg tcaatcaggc ccgtaggccg caccacctgt tcgacgatct gcccggaata
     4201 ctcgagctca taaggacccg gggtggcaga cacatagagg gtctgggggg agagccgctc
     4261 gaattcgtcg aaacggagcg ggcggttatc aagcgccgag ggcaggcgaa aaccatactc
     4321 cactaaggtc tccttgcggg agcgatcgcc gcggtacatg ccgccgagtt gggggatagt
     4381 gacatggctt tcatcgacca ctaaaagggc ctgcttcggc aggtaatcaa ataaggtggg
     4441 tggcggttct ccgggacggc gcccggaaag atagcgggaa tagttttcga tcccggtgca
     4501 ataaccgatc tccaacatca tctccagatc gaaacgggtg cgttgctcca ggcgttgggc
     4561 ctcgaccagt ttgttggctt tcctaagttc ctcaaggcga acactcagat ccgctttgat
     4621 ctgctcgata gcatcgagca cgacctcacg gcgcgtgaca tagtgcgatt tgggatagat
     4681 ggtcaagcgc ggtacccgcc gcaatagctc cccggtcaac ggatcgaaat aggcaagcga
     4741 ctctatggta tcgtcgaaga gctccacccg caccgcctca cgctccgact cggccgggaa
     4801 gatatcgatg atatcgcccc gggctcgata ggtcgcccgc tgcagttcca catcattgcg
     4861 ggtatactgc agttccgcga ggcgcctcaa gagaaaccgc tgatccaagg catcgccgcg
     4921 taccagatgc agcaccatgc tgtgatattc ggacggatcg cccaggccat agatcgagga
     4981 taccgtcgcg acgatgatgg tgtctctgcg ttccaacagc gccttggttg cagacaggcg
     5041 catctgttcg atatgctcat tgatggtagc gtctttttcg atgtaggtat ccgaagcagg
     5101 tacataagcc tcaggttgat aataatcgta atacgagacg aaatattcga cggcgttgtt
     5161 gggaaaaaag ccgcgcatct cgccgtataa ctgggcggcg agggtcttgt taggcgcgag
     5221 gatcagggtc gggcgctgaa ccgcgtggat aacgtgcgcg attgcgtagg tcttacccga
     5281 tcccgtgacc ccaagcaggg tctgatgcgc aaggccggca cgcaaacctt ccaccaactg
     5341 tttgatcgcc tccggctgat cgcctgcagg tggatacgga gagtcaagct cgagacgctt
     5401 gttcatgagg ggttctgcta aagctcaagt tcaagtatag tacaccgcca tttttgattt
     5461 gcgctaacag tgaggtagta aaattgcacg tgaaactcgc cgatcgggct ttaacgatca
     5521 agccctctcc aaccttaagt gtctcggcgc gggctgctgc gctcaaagcc gcaggcaaag
     5581 ctatcatcag tctcgcggcg ggtgagcccg atttcgacac gcccgagcct atcaaggccg
     5641 ccgccatcca ggccatccag gaaggtttta ccaaatatac cgccgtcgag ggtaccccag
     5701 gcttaagacg ggccatcgcc gccaagctca agcgggagaa cacgctcgac tatacgcctg
     5761 aacagatcct ggtctcggca ggctgcaagc acagtatcta taatctcttg atggccttgc
     5821 tcaaccccgg ggatgaggtg atcatctccg ccccttactg ggcctcctat cccgatatgg
     5881 tcaaactgac gggggccgaa ccggtgatca tcaagaccgg ccttgaagat aatttcaaga
     5941 tcaaccaagc acagcttgag gcagccatca cccccaagac gcggcttctg atcctcaata
     6001 gtccctccaa tcctacgggg gaatactata ctcgggaagc gctcttgaag ctcggtgagg
     6061 ttctgctcga acacccgggt atcgtgatcg cctcggacga tatctatgag catatcctat
     6121 ggcatgcaca accatttgca aatattctga acgcctgtcc cacgctctat gatcgcaccg
     6181 tagtgctgaa cggggtctcc aaggcctatg ccatgaccgg ctggcgtatc ggctatgccg
     6241 caggtcccaa gccgctcatc caggccatgg cggatctgca atcacagagc acctccaatc
     6301 ccacctctat tgctcagatc gctgctcaag cggcgctcga aggcgatcag ggatctgtac
     6361 gcgagcaatg caaggtattc aaacagcggc atgattttgt ttacacccgt ttgaatcagc
     6421 taaagggggt gaaatgcctg cccgcccaag gcacatttta tgtcttcccc actatggaag
     6481 gtgtgattgc cggcatcgac ggcgtcgatg aggatattgc gctggccgag tattttctgg
     6541 agaaagcagg cttggctatg gtgccgggat cggcctttgg cgcaccgggc tatatgcggc
     6601 tgtcgtttgc cacgagcctc gataacctca agcgtgcgat ggatcggtta gagggcttac
     6661 taggtaaggg ctgatccccg atggcatagc gcgattgccc tggatggcga agaggaaatt
     6721 attgacctaa accaccagtc tcagtactat tacctctcct tttccccggt agctcagccg
     6781 gtagagcaag cggctgttaa ccgctgggtc gggggttcga gtccctcccg gggagccatg
     6841 ggcatggtca ccgacgttca cccagggtca gccgct
//
LOCUS       DASQSL010000591         1522 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_18739, whole genome shotgun sequence.
ACCESSION   DASQSL010000591 DASQSL010000000
VERSION     DASQSL010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18739"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..389)
                     /gene="pabB"
                     /locus_tag="VE844_06110"
     CDS             complement(<1..389)
                     /gene="pabB"
                     /locus_tag="VE844_06110"
                     /EC_number="2.6.1.85"
                     /inference="COORDINATES: protein motif:HMM:NF016593.4"
                     /note="para-aminobenzoate synthase component 1; catalyzes
                     the formation of 4-amino-4-deoxychorismate from chorismate
                     and L-glutamine; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component I"
                     /protein_id="HZC00934.1"
                     /translation="MQRPRISPIPYSIDTSYRFAALARTPWSIFLDSGRPHSDQGRYD
                     IFAAEPYLTMRTRGPYTEIRGRDSLEEVSEENPFQLVKRYLGEPAPSNTDLPFSSGAM
                     GYFAYDLGRSLEQLPVVAENDIGLPEMA"
     gene            complement(392..1438)
                     /locus_tag="VE844_06115"
     CDS             complement(392..1438)
                     /locus_tag="VE844_06115"
                     /inference="COORDINATES: protein motif:HMM:TIGR03123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HZC00935.1"
                     /translation="MRADRFIGWDLGGAHLKLAQIDASGQLIDVRQLPCPIWRGIEYL
                     DRALEEASHAIQAEQPCHALTMTAELADIFTDRLQGMQVLVEHFGAHVSVGRIRIFAG
                     KAGWLAIAKSKEHATSIASANWLASASYAARKCARGIVVDIGSTTTDIIEFRDGRIWY
                     RGYSDGERLRTGELVYTGVLRTPVMAVVQWVPFEGEWQTLASEQFATLADVYQLTGQL
                     AAVTPPVSFETADGAGREPLDCARRLARMVGRDVGAADLAQWRTLAHYIARRHLSLIR
                     ESVERMLSRGVESHDLPLIGAGVGRFRVRELAAQLGCQYIDFSELVEGAQELTNYAAV
                     CAPAAALAYLAMSS"
BASE COUNT          325 a          463 c          432 g          302 t
ORIGIN      
        1 gccatctccg gcaggccgat gtcgttttcc gcgaccaccg gcagttgctc gagagaccga
       61 ccgagatcat aggcaaaata gcccattgcg ccgctactaa aaggcaagtc agtgtttgaa
      121 ggggccggct ctcctaaata ccgtttcacg agctgaaatg ggttttcctc cgagacctcc
      181 tcgaggctgt cacggccgcg tatctctgta tagggcccgc gggtgcgcat ggtgagataa
      241 ggttcggcgg cgaagatatc atagcgtccc tgatcactgt gaggccggcc gctatcgaga
      301 aagatagacc agggtgttcg cgccagtgcg gcaaaccgat aggaggtgtc gatactataa
      361 gggatcgggc tgatccgggg acgttgcata cttaagaaga cattgccagg taagccaagg
      421 ccgccgcagg cgcgcataca gccgcatagt ttgtgagttc ctgagcgccc tctacaagct
      481 cagagaagtc gatatactga caacccaact gggcggcaag ttcacgcacc cgaaaacggc
      541 ctacgcctgc accgatcagg ggcagatcat ggctctctac accgcgcgat agcattcttt
      601 ctaccgattc tctgatgagg ctaagatgcc tacgtgcaat ataatgggcc agcgtgcgcc
      661 actgcgccaa atctgcggca cccacatcgc gccctaccat cctcgcgagc ctacgggcgc
      721 agtcgagagg ctctcgcccc gctccatcgg cagtctcgaa gctcacaggc ggcgtaaccg
      781 cagcaagctg gccggtcaat tgatagacat ccgcgagggt agcgaactgt tcggaggcca
      841 aggtttgcca ttcgccttca aagggaaccc actggacgac tgccatcacc ggggttctca
      901 gcacccccgt gtacaccagt tccccggtgc gcaggcgttc cccatcgcta tagcctcgat
      961 accaaatcct cccgtctctg aactcgatga tatcggtggt agtgctccca atgtctacca
     1021 cgatcccacg cgcgcacttg cgggcagcat agcttgcgct tgccagccaa ttggctgagg
     1081 cgattgaagt agcgtgttcc ttgctcttgg cgatagcaag ccatccggcc ttgcctgcga
     1141 agatccggat tctgcccaca ctgacatgcg cgccgaagtg ctctaccagg acctgcatgc
     1201 cttgcaggcg atccgtgaag atatccgcca attctgccgt catggtcagc gcatggcagg
     1261 gctgctccgc ctggatcgca tgactggctt cctccagggc acggtctaag tattcgatcc
     1321 cgcgccagat gggacagggc aactgccgga catcaatgag ttggccgctc gcgtcgatct
     1381 gagcaagttt caagtgcgcc ccgccgaggt cccagccgat gaaacgatca gcgcgcatgg
     1441 agtagcgtca ccttccaggt tcgtcggtaa acaagcatct tgggtggggg cggtaaacgt
     1501 caactgcggc gttagcatag cc
//
LOCUS       DASQSL010000592         1007 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_194479, whole genome shotgun sequence.
ACCESSION   DASQSL010000592 DASQSL010000000
VERSION     DASQSL010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1007
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194479"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            789..>1007
                     /locus_tag="VE844_06120"
     CDS             789..>1007
                     /locus_tag="VE844_06120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00936.1"
                     /translation="MRKLMLLAALLAMLAVAAIPAIAQVTQESEQEGEAADLDQTFTI
                     TNDGSNGSQCVGIQGVGNTGNAQNLTDVI"
BASE COUNT          231 a          276 c          307 g          193 t
ORIGIN      
        1 atcctcgctt tcgctcggtg tcgggttttc atctgggacc cgacacttgc ccacggaaac
       61 ctgacattca aaccgatcaa atggcgggtt gtgccaacgt gtgagctgaa ccggagagcc
      121 acgagagtgc gaaacactat ggcacgtgcc tcgccacggc cggaccctcc gacacggttc
      181 cctccgcggt ccgcggccac ctagccgcta atcgaaggtt tcgtgggaag cagggcactg
      241 ttagactgaa gaccggcgcc cgtgccgcgg tcgagaggtt gaagaccgca agcgagcgtg
      301 aggcggtaac acgcgggcgc cggaactaca ttcttcgcct tcagctgtgc cgggtcaaac
      361 gaactgcgcg gtcgtccttc tccttaccca tctgacaagg tgccactggt aggggagata
      421 cttgctcgag gcacttcata tccggcaacc ggccccgaac gttacggagt gttaagagct
      481 ggctataaat tattaactta tgaacctcga tgtagcgcta ggggttttca acgaaccaaa
      541 agaagtatag tatttagata agtgaagatc ctggacggat aaggaggggg gctcccgatc
      601 cgcaagtcag taaaagaaga gccgggcgat cctttctagg gagggggtgg tttagctagc
      661 ccggcccagg agccgttcta ctctgtcctg ctaggtcctg gcggagatcg tgtcccgacc
      721 tggaggtcgc gtagatccgg gatctaaagc gtacaaaaag aagacgagta catggagggg
      781 gaaactacat gaggaagttg atgttgttgg cggcgctttt ggcgatgctc gccgtagccg
      841 ctataccggc catcgcccag gtgacccagg agtccgagca ggaaggcgag gccgccgacc
      901 tcgatcagac gttcaccatc accaatgatg gtagcaacgg tagccagtgc gtaggcatcc
      961 agggtgtcgg caacaccggc aacgcccaga acctgaccga cgtcatc
//
LOCUS       DASQSL010000593         1863 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_194485, whole genome shotgun sequence.
ACCESSION   DASQSL010000593 DASQSL010000000
VERSION     DASQSL010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1863
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194485"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            353..1111
                     /locus_tag="VE844_06125"
     CDS             353..1111
                     /locus_tag="VE844_06125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005438063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC00937.1"
                     /translation="MYHTTGFSQEQITDLCAAIHSKTPDEKKTWPPILGLYKSVTVAL
                     TYMRRNRVQDELAETYGVSQSTISRAVTTVIPLLGEILGEYVPTADEFDGRTQYIVDG
                     TLLPCWSWAAHPELYSGKHKTTGMNVQVACTLSGDLAWISDPIAGNRHDSYCLNESGA
                     LVTSDPGNWIGDKGYVGNDMLTPIKKPKCRDLLDWEKEFNTQINKIRYFIEQVIANFK
                     TWRIMHTDYRRPLSAFAQTISAVVGLHFFKLACE"
     gene            1500..1769
                     /locus_tag="VE844_06130"
     CDS             1500..1769
                     /locus_tag="VE844_06130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00938.1"
                     /translation="MVQLVRQGLDMSLRSVQVWGELARQLVPTTLSPPANLAMISLVY
                     DVFEKLLAAQREVVDELVATQRQLAHHLFDTTATVSTVDDDIALR"
BASE COUNT          392 a          566 c          532 g          373 t
ORIGIN      
        1 tcgtacgttg gcggatcttg tccattgaac tgtcccgtct cccgagtgcc gtagtgcctc
       61 tacgggagag cagtgcaggc aagtcccggg ccgtacgcga ggtcgtcgtg gttggtccac
      121 cacacctgct tcgcgcgttc ctctcgagtg aatcgtgatg tccatggcag tcacgctagg
      181 tgcggctccg gggccgacgt ttttcgattc caggatgaat gcttactcga ccctgagagt
      241 tattcaggac gttagttaat cggcgcgcgc tcggcgtgtc gccacaaaag acgatccatt
      301 tctagagaga attgggttac cacactcaat cactcagaaa cggaccgtcg gagtgtatca
      361 taccacaggg ttctcccaag agcagattac ggacctgtgc gccgcgattc acagcaagac
      421 gccggacgag aagaagacct ggccgcctat ccttggtttg tacaagtccg tgactgtcgc
      481 gctgacgtat atgcgccgta atcgcgtcca ggacgagctg gcggaaacct atggggtgtc
      541 gcaatcgacg atcagccggg cggtcacgac ggtgatccca ttgctcgggg agatactcgg
      601 ggagtacgtg ccaacggctg acgagtttga tggacggacg cagtacatcg tggacggtac
      661 cctgctgccg tgctggtcat gggctgcgca tccggagttg tactccggca agcacaagac
      721 cactgggatg aacgtgcaag tcgcgtgcac gctgtccggc gatctcgcct ggatctccga
      781 cccgattgcc ggaaaccgcc acgactctta ctgcttgaat gagtctggtg cccttgtcac
      841 gtccgatccg ggcaactgga tcggcgacaa gggatatgtc ggcaacgaca tgctaactcc
      901 catcaagaag cccaagtgcc gcgacctgct ggattgggag aaagagttca atacgcagat
      961 caacaagatc cgctacttca tcgaacaagt catcgcaaat tttaagacgt ggagaatcat
     1021 gcacaccgac taccggcgac ccctaagcgc gttcgctcaa accatttcgg cagtagtcgg
     1081 gctccacttc tttaagctgg cctgtgaata accctcctag ttgaagcaac atcttctgcc
     1141 ggacggcaga ctatccctgc gagacatcct tggccggcta ccgtcgccat ccaataaaca
     1201 tttaattgac atttcgctga aagttactaa agacatccgc ccaatgccca cgagccgtta
     1261 catagtgtca ttgtgctgtg gtgcaggtca ccctcgcttt ctcgtggcgg cggttgcgcc
     1321 ctgcgcggat ggcgagaacg gttggtacgc gaaggcatat ccagcatccc tgagaccgag
     1381 accccgggag caccgagatg cccactcaga ccaaaaacgg ccggcaggtc gacgccgcag
     1441 ggaccaccac tgcgcaggcc cgcgccgcca ccgaggcaac ccaccagccg gttgacttga
     1501 tggtccagct cgtacgccaa ggactggaca tgtcactcag gtccgtccag gtgtggggcg
     1561 agctggcccg ccagctcgtc cccacgacgt tgagcccccc cgccaacctg gcgatgatct
     1621 ccctggtcta tgacgtgttc gagaagttgc ttgcagctca gcgcgaggtc gtcgacgagc
     1681 ttgtggctac ccagcgtcaa ctcgcacacc atttgttcga cactacggcg accgtctcca
     1741 ccgtggacga cgacatcgcc ctccggtagg cgacctcagc gggcacctca ggaaccggcg
     1801 gcgtaccggc ttgtggcgct aagccgacga tttggagtat gcgcccgagg gaccgccaat
     1861 ttt
//
LOCUS       DASQSL010000594         1013 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_45722, whole genome shotgun sequence.
ACCESSION   DASQSL010000594 DASQSL010000000
VERSION     DASQSL010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1013
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45722"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            151..>1013
                     /locus_tag="VE844_06135"
     CDS             151..>1013
                     /locus_tag="VE844_06135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003286035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00939.1"
                     /translation="MKNASEKPPIFSASQTHAVDVPLAVNQAPAAVPAPAEVADLGQP
                     ELYINRELSLLEFNRRVLELAKDESIPLLERLKFLCICSTNLDEFFEIRVAGLKQQVA
                     YGSVQRGPDNLTPAEQLRRISETAHGLVKEQYEVLNTLLIPKLAAEGIRFLKRSEWTA
                     RAASWIKRFFNRELLPVISPIGLDPAHPFPRILNKSLNFIVTLEGKDAFGRNSGIAIV
                     QAPRSLPRLIHIPEQPSDGPHDFVFLSSIIHAHVGDLFPGMHATGCYQFRVTRNSELL
                     VDDEEVDDLLRA"
BASE COUNT          216 a          306 c          263 g          228 t
ORIGIN      
        1 ggcggcaaca ggggttcgaa tccccttggg gacgccattc taccctggga tgtgatgcat
       61 aaaagcgcgt atttctgcat atgaatctta caaaaatctg acaagtttag tattttgggt
      121 ttatctttct ttttaacagg cgttgaaccc atgaaaaacg ctagcgaaaa gcccccgatc
      181 ttctcggcct cacagactca tgccgtcgat gtccccctgg ccgtgaacca agccccggcc
      241 gctgtgccag cgcccgccga agtcgccgat ctcggccaac ccgagcttta catcaaccgg
      301 gaattgagtc ttttggagtt caaccgccgc gtgctcgaac ttgctaagga tgagtccatc
      361 ccgttgctcg aacgcttgaa gtttctctgt atctgcagca ccaatctcga tgaattcttc
      421 gagatccggg tggcgggtct caaacagcag gtggcctatg gatcggtgca acggggaccg
      481 gacaatctca ccccggccga gcaactccgc cgcatcagcg agacggcgca tgggctcgtt
      541 aaagagcagt acgaggtgtt gaacaccctt ctcatcccta aactcgccgc cgaagggatc
      601 cgctttctca agcgctcgga atggacggcg agagcggcaa gctggatcaa gcgcttcttc
      661 aaccgcgagt tgctcccggt aataagtccc atcggtctcg atccggccca tcccttcccc
      721 aggatcctga ataaaagcct caattttatc gtgacgctcg agggcaaaga cgccttcggg
      781 cgaaatagcg ggatcgctat cgtccaggcg ccccgttcct tgccacgcct cattcatatt
      841 cccgaacagc ctagcgacgg cccgcatgat ttcgtgttcc tctcctcgat catccatgcc
      901 catgtaggcg atctgtttcc ggggatgcac gcgaccgggt gctatcagtt ccgggtcacg
      961 cgcaatagtg aactcctcgt cgatgacgaa gaggtcgatg atctcttgcg ggc
//
LOCUS       DASQSL010000595         1663 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_84976, whole genome shotgun sequence.
ACCESSION   DASQSL010000595 DASQSL010000000
VERSION     DASQSL010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1663
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84976"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            229..1254
                     /locus_tag="VE844_06140"
     CDS             229..1254
                     /locus_tag="VE844_06140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018280523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZC00940.1"
                     /translation="MQQDVSVVGIDLAKRTFHVVGMDATGQILFRKRLSRDALMPFIR
                     QLPPVVIGMEACGGAHYWARRFREHGHTVKLMAPQFVKPYVKSHKNDTRDAEAIGEAV
                     TRPTMRFVPVKGLAQQDIQSLHRARERLMKVRTALINELRGLLSEYGIVLPTSVRKFR
                     TAFIAKLEAERSKRTELSHELFTHLFDEFLEVEKRLVYYDEKLTTMGRTHPECQRLLP
                     IPGIGPLTATALVAAVSDAEQFHTGRQFAAWLGLVPRQHTTGGKARLLGISKRGDGYL
                     RKLLVHGARAVIQWVGSKTDRRSQWIRQLVERRGKNRTAVAVANKHARIVWVLLSRQQ
                     DYRPVTT"
BASE COUNT          369 a          461 c          499 g          334 t
ORIGIN      
        1 agtatcgtca agagatggcc caacgattcc aaagctggca tgaaattacc ggcttggttc
       61 ctgcagcgta agcgtcaggc caatcgcggt tgtccatctg catacctggt catagtcttg
      121 aagcgcgtta atttaatgga atggacccgc ccctatgggg atcggctttg ataagccaca
      181 atgccctcaa agaacagtgc gatcattgcg ccctaggagg cgagtccgat gcaacaagat
      241 gtgagcgttg tcggtattga tctggcgaag cgtacgtttc atgtcgtggg catggatgct
      301 accgggcaga tcctcttccg taagcgcctc tcccgggatg ccctgatgcc ctttatcagg
      361 cagttgcccc cagtagtaat tggtatggag gcctgtggcg gtgcgcatta ttgggcacga
      421 cggttccgcg agcatgggca tacggtgaag ttaatggcgc cccagtttgt caaaccttat
      481 gtcaagtccc ataagaacga tactcgggac gctgaagcca tcggggaagc ggtgacacgg
      541 ccgacgatgc gctttgtccc ggtgaaaggg ctcgcccagc aagatatcca gtccctccac
      601 cgcgcccggg aacgcctcat gaaggtgcgc actgccttga tcaatgaact ccgaggcctg
      661 ctcagcgaat acggcatcgt gttgcccacc agtgtgcgca agtttcgcac agcctttatc
      721 gcgaagcttg aagcggagcg gtccaaacga acagagctga gtcacgagct ctttacccat
      781 ctctttgacg agtttctcga ggtagagaaa cggcttgtct attacgacga gaagctcacc
      841 accatgggac gaacccatcc cgagtgccaa cggctcctgc ccatcccggg gattggccca
      901 ctgacggcca cggcgttagt ggccgcagtg agcgatgccg agcagttcca cactgggcgt
      961 cagtttgccg cctggctcgg cttagtcccg cggcagcata ccaccggggg caaggcacgt
     1021 cttttgggaa ttagtaagcg cggggatggc tacctacgca aactcctggt gcatggagcg
     1081 cgggcggtta tccagtgggt cgggagcaaa acagatcgtc ggagtcagtg gatacggcag
     1141 ttggtcgagc gccgtggcaa aaaccggacc gccgtggcag tggccaataa acacgcccgc
     1201 attgtctggg tgctgctgag tcgccaacaa gactatcgcc ccgtgaccac ctaaagacac
     1261 cccacgcggg cagcccgtgg gcaacgccgt cgacaagcgc accgttcaaa gtctgcacac
     1321 gagggcttgc gccgtctgct cgggttgaga gggagagcct accacacgat gcgaggggtg
     1381 atcgaggtga tgacacgatc ggtcagaccg gcttctccag actctgacgt ggtcaagggc
     1441 cgcgaaggcc gataatttga tcaggaggag aagcgcacat tgcatcaggg cccgaaggcg
     1501 agcagaggcc ttcacaaggc cgcatatatg actgcatctg ttcctatctg cgtgtcattc
     1561 aagagacctt gacgttgcag gcgggtccat atatgacaac gccacagtgg ctaataatct
     1621 cggccggaaa ccgatggcgc ttatacaagt tgggtggtgg att
//
LOCUS       DASQSL010000596         1286 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_4986, whole genome shotgun sequence.
ACCESSION   DASQSL010000596 DASQSL010000000
VERSION     DASQSL010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4986"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(135..>1286)
                     /gene="ltrA"
                     /locus_tag="VE844_06145"
     CDS             complement(135..>1286)
                     /gene="ltrA"
                     /locus_tag="VE844_06145"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006419932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZC00941.1"
                     /translation="YAQHLEANLTSLLHRFKSGTYYAPPVRRVYIPKDDGKASRPLGI
                     PSFEDKVLQRAVAMVLEAVYEQDFRDCSYGFRPKRSPHQALEAFRNQVMEMRGGWVIK
                     IDIKSYFDTISHRQLRVILDQRVRDGVIRRTIDKWLKAGVLEHGEVTYSETGVPQGSG
                     VLAILSNLYLHEVLDTWFEDVVKPRLEGDAVLYRFADDALILCARENDAKRVMRVLAK
                     RFEKYGLTLHPEKTGVTRFTRPPRGGQPRRRRDVTTWPGSVDLLGFTLYWAKSRRGNW
                     GVKRKTATDRLSRALKRINTWCRENRHAQVGWQHQKLAQKLRGHYGYYGMSTNSRRLA
                     QFRYGVIRIWRKWLSRRSQRSNIRWDRFHEFLKHHPLPQVKIVHSALKS"
BASE COUNT          263 a          387 c          356 g          280 t
ORIGIN      
        1 ttataaaaac tgtccgaagt attgatcacc aaaaagcacg gggtcgggta gaccagagaa
       61 gttacccgct ctggcctccc ccagatccgg acgtgccgga ctacggcatc cggctcctca
      121 gaactctaga tttgctatga tttcagcgcg ctgtgcacga tcttgacctg gggcagcgga
      181 tggtgcttta ggaactcgtg gaaccgatcc catcggatgt tactccgctg agaccgccgg
      241 cttagccatt ttcgccatat tcggatcacg ccgtagcgaa actgggccag acgccgactg
      301 ttcgtgctca ttccataata gccgtagtgg ccacggagtt tctgcgccag cttctgatgt
      361 tgccacccga cctgggcatg tcgattctcc cggcaccacg tattgatccg cttcagggct
      421 cggctcagac gatctgtcgc cgtcttgcgt ttgacccccc agttaccccg acgtgacttc
      481 gcccagtaga gggtaaagcc aagcaggtca accgaccccg gccatgtggt gacatctcgt
      541 cgccgacggg gttgcccacc gcggggtgga cgcgtgaacc gagtcacgcc ggtcttctcc
      601 ggatggagcg ttaagccgta cttctcgaac cgcttcgcca acaccctcat cacccgtttg
      661 gcgtcgttct cacgcgcaca caggatgagg gcatcatcgg caaagcgata gagtaccgca
      721 tccccttcga ggcgtggttt gaccacgtcc tcgaaccagg tgtcaaggac ttcgtgcagg
      781 tagagattgg acaatatcgc taacaccccg gagccttgtg ggaccccggt ttccgagtag
      841 gtcacctctc catgttccag cacgccggcc ttgagccatt tgtcgatcgt acgtcgaatg
      901 acgccgtcac gtacccgttg gtccaggatg actcggagtt gacggtgcga aatcgtatca
      961 aaatagctct tgatatcgat tttgatcacc cagccgcccc gcatctccat gacctggttc
     1021 cggaaggcct caagggcttg gtgaggggag cgtttgggcc gaaacccata tgagcagtcc
     1081 cgaaagtcct gctcgtagac tgcttccaac accatcgcca ctgcccgttg gagcactttg
     1141 tcctcaaagg agggaatgcc aagtgggcga gatgccttgc cgtcatcctt cgggatgtat
     1201 acacgccgaa ctggcggtgc atagtaggta cccgacttga aacggtgcaa caaagaggtc
     1261 aggttggcct ccaggtgctg cgcgta
//
LOCUS       DASQSL010000597         1237 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_155718, whole genome shotgun sequence.
ACCESSION   DASQSL010000597 DASQSL010000000
VERSION     DASQSL010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1237
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155718"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..979
                     /locus_tag="VE844_06150"
     CDS             <1..979
                     /locus_tag="VE844_06150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00942.1"
                     /translation="WAEVLKQGQDQGLSLGVVVKDAAKGIEAGVNEVFPQAEQRDDCF
                     HALYELNKVRRWLEQRAYRAIAAEEAHHQLPQIPASDRKQRRCHRHRIARAHRHCQEA
                     IVRFDRFEEAMQEVQEGLECVDLEDGHLRQAGEVKALIEQAADSLQVLDPACHKVARY
                     LRNRAAGLSLATGELNTRLHELATTYSLGAVAVACMLWRLVLELQNDRRPWQRAQQHR
                     QLLGAFAYLKYLLGPQLDTLLNAVKALLEQRHRASSAIEGFNAALRPFLYVHKGVTQG
                     FLELFRAYHNLKTRRWGPHQGTSAHQCLTGQAVGDWLTLLGFPPSNTLH"
BASE COUNT          271 a          354 c          350 g          262 t
ORIGIN      
        1 ctgggccgag gtactcaagc agggccagga ccaagggttg agcctgggcg tcgtggtcaa
       61 ggacgcggcc aagggcattg aagccggggt caatgaggtt ttcccgcagg ccgagcagcg
      121 cgatgattgt ttccatgccc tgtatgagct caataaggtg cggcgatggc tcgagcaacg
      181 ggcttaccgt gccattgctg ctgaagaagc ccatcatcag ttgccgcaga tccccgcaag
      241 cgaccgtaaa caacggcggt gccaccgcca ccgaatcgct cgtgcccacc gccactgcca
      301 agaggctatt gtccggtttg accgctttga ggaggccatg caggaggtgc aggaggggct
      361 ggaatgtgtt gacctggagg atggccatct tcgccaggcc ggcgaggtga aagcgctgat
      421 cgagcaggcc gcagacagtt tgcaggtcct ggatcccgcc tgtcacaagg tggcacgcta
      481 cctgcgcaat cgggccgctg gcttatcgct ggccacgggg gagttaaaca cccggctgca
      541 tgagttggct acgacctaca gccttggggc ggtggcggtg gcgtgcatgc tatggcggct
      601 ggtacttgag ttacaaaatg accgccgccc ctggcaacgg gcccaacagc atcggcaact
      661 cctcggcgct tttgcatacc taaagtattt gctcggtcct caacttgata cgctcttgaa
      721 tgcggtcaaa gctctcctgg agcagcggca ccgagcttcc agtgccattg aaggattcaa
      781 tgctgccttg cgtccctttc tctatgtgca caagggagtg acacagggtt tcttagagct
      841 ctttcgcgcc taccataatc tcaaaacccg gcgctggggt cctcaccaag gcacttcagc
      901 tcaccagtgc ctgaccggtc aagccgtggg cgattggctt acgctcctcg gcttcccgcc
      961 ctcgaacacc ctgcactaac ccctaaggct caacgccttt caaacgggaa gcttcatccc
     1021 gtcctgaacc ccctccgttg atggctattt ttgcccaccc cctcgaaaag gtaaaaaata
     1081 gcctgattca atgcaaactt atgttcaggg taaccgttca gaacgtgaac ttagcagtga
     1141 agtaaaagga gatagagtta tgaataagcc cattttatta gcagcaacgg cagttttcgc
     1201 aagcatagtt atgctcccaa gtgaagtata tgcagat
//
LOCUS       DASQSL010000598         1006 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_127673, whole genome shotgun sequence.
ACCESSION   DASQSL010000598 DASQSL010000000
VERSION     DASQSL010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127673"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..751
                     /locus_tag="VE844_06155"
     CDS             <1..751
                     /locus_tag="VE844_06155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00943.1"
                     /translation="SQAEAPIVFFEQGERLIASQEVHGNTFNGNLFLRFGLPFDSQLE
                     LGIPYLYIDRGVVTEVDFSARAERDDHGSGFGDLRFGLAKGLLRGRNGWPNLIGRVTW
                     DTDLGETSDDGFSLGGGFNELQGSLTMIKRQDPLVFIGGASYGTTFEKEGINPGDTVG
                     FLVGALLGASPETSLRIVLNQTFVNEQEVGDRALRGSDAVIGTLSFGASSIIGRGKFL
                     SLSAGIGLTDEAPDYSVGISLAVRFDIPTRF"
BASE COUNT          208 a          280 c          280 g          238 t
ORIGIN      
        1 aagccaggca gaggcaccga tcgtcttctt cgagcaaggg gagcgattga ttgcatccca
       61 agaagttcac ggcaatacct tcaacggcaa tctctttctg cgcttcggtc tacccttcga
      121 ctcacaattg gaactcggta tcccttatct atacatagat cggggggtgg ttacagaagt
      181 agattttagc gcacgtgccg agagggacga tcatggctcg ggattcggtg atctccgctt
      241 cggcctggcc aaggggttgc tgcgcgggcg caacgggtgg ccgaatctca tcggtagggt
      301 gacatgggat acggacttgg gcgaaacctc cgatgatggc ttttcgcttg gcggcggctt
      361 caacgagctc cagggctcgc tcactatgat caagcgccag gatccgctcg tattcatcgg
      421 cggcgcctcc tacggaacca ccttcgaaaa ggagggtatc aacccgggcg acactgtcgg
      481 cttcttagtc ggggcgctgc taggcgccag ccctgagact tcgctgcgca ttgtgctcaa
      541 tcagaccttc gtcaacgagc aggaggtcgg ggatagggcc ctccgcggat ccgatgcggt
      601 gatcggaacg ctgagctttg gggcctcctc gatcatcggc cgcgggaagt ttctcagcct
      661 ctcagccggg attggtttga ccgatgaggc tccggattac tcagtgggga tttctttagc
      721 ggtgcgcttc gatatcccca cccgcttcta gcgaccctcc gtttagcagc aaacctaagc
      781 atctgtaaca aaataacctt tttcttccat gttaggtctg gacttcagct ggataaaatc
      841 caggccagac tatgatacct tgcggaacta cggggctatc gccgcatgag actgtccgaa
      901 ccatttcacc ttcagtatgg tttctcccat ccaatttcca aaccgtttga actgagcgac
      961 taaccgattg gcggtaggag ttgttcgtga gcctaactca aatccc
//
LOCUS       DASQSL010000599         1689 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_194491, whole genome shotgun sequence.
ACCESSION   DASQSL010000599 DASQSL010000000
VERSION     DASQSL010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194491"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            64..582
                     /locus_tag="VE844_06160"
     CDS             64..582
                     /locus_tag="VE844_06160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010112707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HZC00944.1"
                     /translation="MSAGYAADPIPGELTMTLKLSSTAFSHNSEIPKRYTCDDADLSP
                     PLGWSDLPAGTQSLALIVDDPDAPDPAAPKMTWVHWVLYNIPPTATGLAEGIKSKDLP
                     AGTREGMNDWKRTGYGGPCPPKGRHRYFHKLYALDVLLPDLGKATKVKLEEAMKGHIL
                     GQAELIGTYQRS"
     gene            712..>1689
                     /locus_tag="VE844_06165"
     CDS             712..>1689
                     /locus_tag="VE844_06165"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HZC00945.1"
                     /translation="MVPKQQYILGSADTSEIVILGCDVLPRHARLTVTGKGPRVEAIE
                     GAPVAVNGQSIGSPVYLHDGDWLALGTTLFQIMIQPVGLEVSTAGVPAEAQSRILTIG
                     RLPECDLHIPSPLVTREHARMLWEAGHWVLEDLGSTNGTFVNGERLAGRVTVYPRDCI
                     EIATFAFIFTGHTLEPVDITGRVRIEVHDLVKEVRDRASGKPRRLLDQISLVIEPGEF
                     VGIFGTSGSGKSTLLDALSGRRSPSGGKVLYNGTDLYESFDLFRAAIGYVPQQDIVHR
                     KIAVARALGYTARLRLPADTSAREIDAHISRVLERVGLAEKAALPIDTPE"
BASE COUNT          351 a          476 c          499 g          363 t
ORIGIN      
        1 aaaccaatgg ctattagatc tatgcttgcg ggcgcgctgt tgataatcac gttgtcggcg
       61 ggaatgagcg caggctatgc tgccgatcct ataccaggag aacttaccat gacactgaag
      121 ctgagctcaa cggccttttc acataatagc gagatcccca agcgctatac gtgtgacgat
      181 gcggatctct ccccgcctct cggctggtca gatctgcctg ctggaaccca gagtctggcg
      241 ctcatcgtcg atgatccgga tgcgcccgat ccggccgcgc caaagatgac ctgggtgcac
      301 tgggtgcttt acaacattcc acccacagcc acaggccttg cagagggtat aaagtctaaa
      361 gacctccccg ctgggacgcg ggagggcatg aatgactgga aacggacagg ctatggtggc
      421 ccttgccctc ccaagggccg tcaccggtat ttccacaagt tatatgcgct cgatgtgcta
      481 ttgcccgatc ttggcaaggc tacgaaagtg aagttggaag aggcgatgaa ggggcatatc
      541 cttggccaag cggaactcat tgggacctat cagcgcagct agcagtgcct catctccgta
      601 ggtcttctat ccacttgagc acctcgatgg aaaagagagg caactattct agccgctacc
      661 cactatatag aattccgtag ctcctacagt cgcaaagggg tgggtgtagc cttggtcccc
      721 aagcagcaat atatcctagg cagcgcggat accagtgaga tcgtgatcct aggttgcgac
      781 gtattacccc gccatgcacg ccttaccgtg accggtaaag gacctcgggt agaagcgatt
      841 gagggggcgc ctgtggcagt caatgggcaa tccatcggca gcccagtgta cctgcatgat
      901 ggggattggt tggcgctggg aacgacgctg tttcagatca tgatccaacc cgttggcctc
      961 gaggtgagca cagcgggagt ccctgccgag gctcaatctc ggatcttgac gatcggccgt
     1021 ttacctgaat gtgatctcca tataccctct cccttggtca cccgtgaaca cgcccgcatg
     1081 ctttgggaag ctgggcattg ggtcttggaa gacttaggca gcaccaatgg taccttcgtc
     1141 aatggcgagc ggctggccgg gcgcgtcacc gtgtacccac gcgattgcat cgagatcgcc
     1201 acctttgcgt ttatatttac cggccacacc ttggaacccg tggacatcac cggacgggtc
     1261 cgtattgagg tgcacgatct cgttaaagag gtgcgcgatc gggcctcggg caaaccgagg
     1321 cgtttgctgg atcagatcag cctcgtgatc gagcccggtg agttcgtggg gatcttcggc
     1381 accagcggat cgggcaagtc gaccttgctc gatgcgcttt ccggtcgccg ttcgccttcc
     1441 gggggaaagg tgctttataa cggtaccgat ctctatgagt cctttgatct cttccgggcg
     1501 gcgatcgggt atgtgcccca acaagacatt gtccaccgca agatcgcggt agcgcgcgca
     1561 cttggctata ccgcacggtt gcgcctgccc gcggatacct cggcgaggga gatcgacgcg
     1621 catataagcc gggtgctcga gcgggtgggt cttgccgaga aggcggcgct gccgattgat
     1681 acgcccgaa
//
LOCUS       DASQSL010000600         1461 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_182137, whole genome shotgun sequence.
ACCESSION   DASQSL010000600 DASQSL010000000
VERSION     DASQSL010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1461
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182137"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..713
                     /locus_tag="VE844_06170"
     CDS             <1..713
                     /locus_tag="VE844_06170"
                     /inference="COORDINATES: protein motif:HMM:NF023367.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3459 domain-containing protein"
                     /protein_id="HZC00946.1"
                     /translation="IPGPQFVVFTQNHDQVGNRMLGERLSQLVSFEAAKLAAGTVLLS
                     PFIPLLFMGEEYGETAPFAFFISHLDQELVDAVRRGRHEEFASFAWQGEPPDPQDEGT
                     FQSAILNYQLRQQGHHQAMLSFYRELIRLRKDHPALASLSKEDMEVWGLEKQRILLIR
                     RWCQDEEMVIVLHFGHEQGSALLPLLPGRWLKQVDSAEERWRGPGGFAPEELQSDGEA
                     KLTLPPESLVLYGQWGER"
     gene            940..1326
                     /locus_tag="VE844_06175"
     CDS             940..1326
                     /locus_tag="VE844_06175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015280328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HZC00947.1"
                     /translation="MAGSSDTYHEPLEKLSSTTQDMHRALVSLQEELEAVDWYQQRAD
                     ACEDTELRAILIHNMREEIEHAAMVLEWLRRRHPDFERHLRTYLFQQKPIMEIEAIDT
                     AINGNATPSAGIPHGNRLTVGTMQGA"
     gene            1330..>1461
                     /locus_tag="VE844_06180"
     CDS             1330..>1461
                     /locus_tag="VE844_06180"
                     /inference="COORDINATES: protein motif:HMM:NF016349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0042742 - defense response to bacterium
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="encapsulin"
                     /protein_id="HZC00948.1"
                     /translation="MDDLNRQLAPFGVEIWQRIDEAAVNAARDVLTGRRFLEVDGPYG
                     "
BASE COUNT          312 a          418 c          452 g          279 t
ORIGIN      
        1 cgattccggg gccccaattc gtggtcttca cccagaacca cgatcaggtc ggtaaccgca
       61 tgctcggcga acgcttgagc caactggttt cctttgaggc ggccaagctc gcggccggga
      121 ccgtcctgct gtcgcccttc atcccactgc tgttcatggg cgaggagtac ggcgagacag
      181 ctccctttgc atttttcatc agccatttgg atcaggaatt ggtcgatgcc gtgcggcgtg
      241 gccgtcacga ggagtttgcc agctttgcct ggcagggtga gcctcccgac ccacaggacg
      301 aagggacctt ccagagcgct atactgaact accagctacg ccagcaggga caccaccagg
      361 cgatgctgtc gttctacagg gaactcatcc gcctccgcaa agaccatccc gccctcgcct
      421 cactgagcaa ggaggacatg gaggtgtggg gcttggagaa acagaggatt ctgctgatcc
      481 gccgttggtg ccaggacgaa gagatggtca ttgtgctcca ctttggccat gagcagggat
      541 cagccctctt gcccctacta cctggacgat ggcttaaaca ggtggactct gccgaggagc
      601 gctggcgtgg ccctgggggt tttgcgccgg aggagctgca gagcgacggc gaggcgaagt
      661 tgacgctgcc ccctgagtcg cttgtgttat atggacaatg gggtgagcgt tgagacaggc
      721 ggatcggtcc gcggcctgcc ttgccacatg gcctcgagac gctaggtagc tgcaggcagg
      781 gcatgcgagt cgggggcaag gcaccatgcc aaggccttcc ccggcctcta ctgtctgtgt
      841 gtgccagttg tcacatatca tccatgcatc ttgttcctca agatgggcag atatactccc
      901 ggagaatggg cacatatgag ttaaaggaga atcatcgcta tggcgggaag cagtgatacc
      961 tatcacgaac cactggagaa gctctcctcc acgacgcaag atatgcaccg cgccctggtc
     1021 tccctacagg aagaattaga agcggtggac tggtaccagc agcgcgctga tgcctgcgaa
     1081 gataccgagc tgagagccat cctcatccac aacatgcgcg aggaaatcga gcatgcagcc
     1141 atggtcttgg agtggttgcg gcgacgtcat cctgactttg agaggcacct acgcacctac
     1201 ctcttccagc agaagccgat tatggagatc gaggccatag acacagccat caacggcaac
     1261 gcgacgccga gcgctggcat accacatggc aaccggctga cggtcgggac gatgcaaggg
     1321 gcataagaca tggacgatct gaatcggcag ctagcgccgt ttggggtgga gatctggcag
     1381 cgcatcgacg aagcagccgt gaatgcagcc cgcgacgtgc tgacggggcg gcgattcctc
     1441 gaagtcgatg gaccttacgg g
//
LOCUS       DASQSL010000601         1236 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_182162, whole genome shotgun sequence.
ACCESSION   DASQSL010000601 DASQSL010000000
VERSION     DASQSL010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1236
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182162"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            130..>1236
                     /locus_tag="VE844_06185"
     CDS             130..>1236
                     /locus_tag="VE844_06185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00949.1"
                     /translation="MDKRFVIPFGFALMLTMAVIGTLALFNLTDLSPAEASINDTFND
                     TQVNLDPLKVSSAPSRLTITDNAVTVDPNDPGALTRLEARFTLGATGSELNNGVDTIV
                     LTFDEDFQVPPSIDRNNVSISATQVTGTGEVPGSANIAVAPQVVTVDFVGTENNEPEI
                     TITVPDMDPGDNTGGNGIAAGATVTVIFSQAAGIRNPTEGDAGGYFARISTSKETAPV
                     ETDVIIPFIVELDTAADPRNTEVTLVGRGFRNATTTTFWRDANGDGNRDPGELDICSA
                     LTGDDDVATCTFTVTNPPFAPSFGTDCDIAATDGDGLENCNYINAIDGRNNRSTQLNQ
                     TDVDQQIFELEGEVTASPSTGDPGDTLTIQLRDFP"
BASE COUNT          286 a          386 c          320 g          244 t
ORIGIN      
        1 ttaactaaat tgaggagtgg tgcgccccga gcgcactgct gaccagggag acggcctatg
       61 tagcaaggct aaatttccaa cctgagaaca gtctttgaaa tggatactcc tgaaaggata
      121 aatgattaga tggacaaaag attcgtgatc ccctttggct ttgctttgat gctgaccatg
      181 gctgtgattg gcacattggc cctgttcaac ctcactgacc tctccccagc tgaagccagc
      241 atcaatgaca ctttcaatga cacccaggtt aatcttgacc cgcttaaggt aagcagtgcc
      301 ccgtctaggc tcaccataac ggacaatgct gtgacggtcg atcccaacga cccaggggcc
      361 ctgacccgcc tggaggccag gttcaccttg ggggccaccg gctctgaact caataacggt
      421 gtagacacta tcgtcctgac gtttgacgaa gatttccagg ttcccccttc gattgaccgg
      481 aacaacgttt ccattagcgc cacccaggtg accggcactg gcgaagtccc tggttctgcg
      541 aacatcgcgg tagcgcctca ggtggtgacc gtagacttcg ttggcaccga gaacaacgag
      601 ccggagatca ccattaccgt gccagacatg gaccctggcg acaacaccgg cggtaacggt
      661 attgccgccg gcgccacggt gaccgtcatc ttctctcagg cggctggtat ccggaacccc
      721 accgaaggcg atgcaggcgg ctacttcgct cgcatttcca cctctaaaga gaccgcccca
      781 gtagagactg atgtcatcat tcccttcatc gtggagctgg atactgccgc cgaccccagg
      841 aacactgagg tcaccctggt gggcagaggc ttccggaacg ccaccaccac caccttctgg
      901 cgggatgcca atggcgacgg caaccgggac cccggcgaac tggacatttg tagcgccttg
      961 acgggcgacg acgacgtggc gacctgtacc ttcaccgtca ccaacccgcc gttcgcaccc
     1021 agcttcggca ctgactgtga tatcgcagct accgacggtg atggtctcga aaactgtaac
     1081 tacatcaacg ccatagacgg ccgcaacaac agatccactc aactcaatca gactgatgta
     1141 gaccagcaga tcttcgagct cgagggtgag gtaaccgcca gccccagtac gggcgaccct
     1201 ggagacactc tcactattca gctccgggac ttcccc
//
LOCUS       DASQSL010000602         1166 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_127688, whole genome shotgun sequence.
ACCESSION   DASQSL010000602 DASQSL010000000
VERSION     DASQSL010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1166
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127688"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            294..827
                     /locus_tag="VE844_06190"
     CDS             294..827
                     /locus_tag="VE844_06190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009626001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HZC00950.1"
                     /translation="MIHIQALIDDAKCFETVRALRWPDGVRCPTCDSSELTKQGRDDT
                     QPERQRYLCKSCRRHFDDLTDTVFAGPHQPLRVWILCLYFMGLNLSNAQMAKELDLHP
                     SDVHQMTCQLRQGLVAKKPSPTLTDEGECDEVYIVAGHKGKPDAVAKKGGADGADGSR
                     ASGDGARLRPRSRRFSG"
     gene            797..1166
                     /locus_tag="VE844_06195"
                     /pseudo
     CDS             797..1166
                     /locus_tag="VE844_06195"
                     /inference="COORDINATES: protein motif:HMM:NF033547.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT          262 a          318 c          333 g          253 t
ORIGIN      
        1 cagcccgcca tcggaggtca ctcgcgatcc ccgaacatcg acctgcaagg agcggttgaa
       61 ggataactga aatggctcgt ggtattgctc acccattggg gatgaccctc ccgaaggcca
      121 tcttcaggct ggaacccgca tgaatcttcg cgttggaggg cagtataaat caggcttggt
      181 gatttcaagg ctcaattcgg attccaggga gttgacagcg ctccctcttg taaggggccc
      241 tcgctttgta ttgggctctt gtgtcgtctc gtccaatggg cgatactggc gcgatgatac
      301 acattcaagc cctcatcgac gacgccaaat gctttgagac cgtccgtgcg ctacgctggc
      361 cagacggcgt tcgttgtcca acctgtgaca gctctgagct caccaaacaa ggtcgtgacg
      421 acacccagcc cgagcgtcag cgctacctgt gcaagtcctg tcgccgccac ttcgatgatt
      481 taaccgacac ggtctttgct ggtcctcatc aaccccttcg ggtctggatt ctgtgcctgt
      541 acttcatggg cctgaacctc tcgaatgctc aaatggccaa ggaactcgat ctccacccgt
      601 ctgacgtgca tcagatgact tgtcagttgc gccaaggtct tgtcgccaag aaaccgtcgc
      661 cgaccttaac agacgaggga gaatgtgacg aggtctacat cgttgctggc cacaaaggca
      721 agcctgatgc ggtcgcaaaa aagggcggcg cggacggcgc agacggctca agggcaagcg
      781 gggacggggc acgcttgcga ccgagaagcc gccgattttc gggatgatcc agcgtggcgg
      841 agatgtgatc attcggatgc tggaaaacgt ccaacaaatg acgatcaagc cgctgatcca
      901 agcgacgatt gcaccgggca cgtgtgtgta cacggatgag tacgacatct atagccgttt
      961 ggaccagtgg agcgacgagc ataagagcgt ctgccatggc aatggtgaat atgcccgaga
     1021 tgacgacgac gatggccttt atgaagtgca tgtcaacact atggaaggct tttggtcact
     1081 gctgaggtcg tggttgcgtc cgcatcgcgg catctcgcaa gacaacttac cactgtatgt
     1141 aggattcttt gaatttgtgc acaacg
//
LOCUS       DASQSL010000603         3824 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_194508, whole genome shotgun sequence.
ACCESSION   DASQSL010000603 DASQSL010000000
VERSION     DASQSL010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3824)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3824)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3824
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194508"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..396
                     /locus_tag="VE844_06200"
     CDS             <1..396
                     /locus_tag="VE844_06200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008192306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HZC00951.1"
                     /translation="AEDARIEDRNHFEALVPRIYELGGQLPKSMVDFHNISACPPASL
                     PTDPTDIKAMLNVLVEAERCAVRGYTRICDVTLGKDHRTYELSAAILHEEIEHESWFS
                     ESLGEDPSGHALRRSGENSPYVSKFLGAR"
     gene            469..1473
                     /locus_tag="VE844_06205"
     CDS             469..1473
                     /locus_tag="VE844_06205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018393435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HZC00952.1"
                     /translation="MTRRNFIKYGSATAVSGVGLAAVVAGRPPNDPVRVRAQLPSDHA
                     PAHDANMTVGEVNHAANGFDPTKMLYAWDYGKVSTLPTGQTLREYRLTAVDKDIEIAP
                     GVKFPAWTYNGRIPGPTLRCTEGDRVRIHFANGGSHPHSIHFHGIHPAEMDGVDPIPV
                     GQSFVYEFDAAPFGLHLYHCHVFPLKRHLHKGLYGGFVVDPKQGRSPARELFMLMNGF
                     DTDFDGENDVYAVNTVGFHFMHHPVPIGLGELVRVYLVNMLEFDLINGFHLHANFFDV
                     YRTGTRLQTNEYTDTIILGQAERAILEFRINYPGRYMFHAHISEFAELGWVGLFEVRP
                     "
     gene            1542..2684
                     /locus_tag="VE844_06210"
     CDS             1542..2684
                     /locus_tag="VE844_06210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012873583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal transporter"
                     /protein_id="HZC00953.1"
                     /translation="MSLLFVFLALLIYGSPRLRPQGFGLPPVERIEITRIVLPHPELI
                     VLTAVNTGPEPVTIAQVRVDEAYWRYEIQPTATISRLRSAAIRIPYPWVEGERHEVSL
                     VTATGASFSAEIPVATQTPVADHRSLLQLALIGFYVGVIPVGLGLMWHPFMRDLSRTK
                     TDAVLSLTIGLLVFLCVETTKDGLEIAARVPEAFSGQALFTAGALFAYLLIQRIGLRR
                     RALEPSEAAGRLRVSYLLAFGIGLHNLAEGLAIGAAYGAGQVALGAFLIVGFTLHNIT
                     EGIGIAAPVAHDRPGFFAFLWLALIGGAPAIAGAWIGGFVYSDLAAALFLGIGLGAIV
                     QVIAQVARLLLSHSSRYGMVIAAWPNLVGLALGLGIMYGTSVLVAV"
     gene            2681..3664
                     /locus_tag="VE844_06215"
     CDS             2681..3664
                     /locus_tag="VE844_06215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013249736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase"
                     /protein_id="HZC00954.1"
                     /translation="MMATGFLYDPAFLEHDTGFGHPERRERLSVTMDHLQKQSWFAER
                     LKRITPKPAAITWIQQIHEPNYIERARATCAAGYRYLDSLDVSISQRSFDIALLAAGG
                     ALELADRLMAGEIDNGFALLRPPGHHAELGMALGFCLFNNVAILARYLQKQYGLDKIL
                     ILDWDVHHGNGTQHTFEEDPSVLYVSLHQYPFYPGTGAYSETGIGKGAGATLNCPMSA
                     GATDTDYQAAFTERILPKLNRFKPEAVLISAGFDAHAEDPLAQICLSTECFGWMSARM
                     MEVAETHAGGRLLSLLEGGYNLHALPLCIAKHLTVLANVEDATPVTRRDNG"
BASE COUNT          744 a         1118 c         1082 g          880 t
ORIGIN      
        1 gccgaggacg cgcgaatcga ggaccgcaat catttcgaag ccttggtgcc tcgcatctat
       61 gagttgggag gccaactacc gaaaagcatg gtggatttcc acaatatatc ggcctgtcca
      121 ccggcttctt tgccgactga cccgaccgat atcaaagcga tgctcaatgt cttggtcgag
      181 gccgagcgct gcgccgtacg cggttacacg cgcatctgtg acgtgactct cggtaaagac
      241 catcgtacct acgaactatc ggccgcgatc ctccacgagg agatcgagca tgagtcctgg
      301 ttttccgagt ccctgggaga agacccaagc ggccatgccc tgcgcaggtc cggggagaac
      361 tcaccttatg tcagcaagtt cctcggagct cggtaggcca gaggagaacc gcgggggcgg
      421 gcataagcct gctcccgccg atgttccgcg agcttttacc agcacatcgt gacccgtcgc
      481 aatttcatca aatatggttc agccacagcg gtgagtgggg tcggccttgc cgcggtggtg
      541 gcgggacgcc cgccaaatga cccggttagg gtgcgcgcac aactgccaag cgatcacgcg
      601 cccgcgcatg atgcgaacat gacagtcggc gaagtcaacc atgccgcaaa tgggtttgat
      661 cctacgaaaa tgctctacgc ttgggattat ggcaaagtga gcaccctacc taccggtcag
      721 accttgcgcg agtaccgtct cactgcagtc gataaggaca tcgagatcgc ccctggcgtt
      781 aagttcccgg cctggactta caacggcaga atcccgggcc ctacgctgcg ctgcaccgaa
      841 ggagatcggg tgcgcatcca ttttgctaac ggcggatcgc atccgcattc catccatttc
      901 cacgggatcc accccgcgga gatggatggc gtggacccca tcccagtcgg ccaatcattt
      961 gtctacgagt tcgacgctgc gccgtttggg ctacatcttt atcactgcca tgttttcccc
     1021 ctcaagcgcc acctgcataa agggctttat ggcggatttg tcgtcgatcc taagcaaggc
     1081 cgttcgccgg cgcgcgagct gttcatgctg atgaacggat tcgatactga ttttgacggc
     1141 gagaacgacg tatacgcggt caacacggtg ggcttccatt ttatgcacca tccggtgccg
     1201 atcggtcttg gcgagctcgt gcgcgtttat ctcgtcaata tgttggagtt cgacctcatc
     1261 aacggcttcc atttgcacgc caacttcttc gacgtttatc gcaccggcac aaggctgcag
     1321 accaacgaat acaccgatac gatcatcttg gggcaggctg agcgcgcgat cttagaattt
     1381 cgaatcaatt atccgggtcg atacatgttc catgcccata tcagcgaatt cgcggaactc
     1441 ggctgggtcg gtctttttga ggtgcggccc tgagcgtttc ggcgactgat acgcacggag
     1501 ccggctggtc aacgcgccgc cttagggcgg tcgtatttcc gttgagcctg ctcttcgttt
     1561 tcctggcgct gttgatttac ggcagtcctc gccttcgccc gcaggggttt ggtctgccgc
     1621 ctgttgagag aatcgagata acgcgcatcg tcttacccca tcccgagcta atcgtgttga
     1681 cggcggtcaa cactggaccc gaacccgtca cgatcgccca ggtccgggta gatgaggcct
     1741 attggcgcta tgaaatccag cccacagcga ctatctcgcg cctgcgctcg gcggccatac
     1801 gtattcccta tccctgggtc gagggcgagc gccatgaggt cagcttggtc actgctaccg
     1861 gtgcgagttt ttccgcggaa atccccgtgg cgacgcaaac gcctgtcgct gaccaccgat
     1921 ccttactgca actcgcgttg atcggttttt atgtgggcgt gatcccagtg gggctaggcc
     1981 tcatgtggca tcccttcatg cgcgatctga gccgcacaaa aacggacgcc gttttatccc
     2041 tgacgatagg cttgctcgtt ttcctttgcg ttgagactac gaaagacggt ttagagatcg
     2101 ccgcgcgcgt gcccgaggct tttagcggcc aggcgctatt caccgcaggt gcgttgttcg
     2161 cttacctctt gatacagcgc ataggcttaa gaaggcgtgc gttggagcca agcgaagccg
     2221 cagggcggct tagggtctct tatctgctcg cgttcggcat aggcctacat aacctggccg
     2281 aggggcttgc gatcggcgcc gcctatggcg ccggccaagt ggctttgggc gcttttctga
     2341 tcgtcgggtt cacgttgcat aacatcaccg agggcatagg catcgccgcg cctgttgccc
     2401 atgatcgccc cggctttttt gcgtttcttt ggctcgcgct tatcggtggg gcgccggcca
     2461 tcgccggcgc ttggatcggt ggattcgttt acagtgatct ggctgcggca ctattcttgg
     2521 gcattgggct aggggcgatc gtgcaagtga tcgcccaggt ggcaagattg cttttgagcc
     2581 atagctcgcg ttacggcatg gtcatcgcgg catggccaaa cctggtcggc ctggcattgg
     2641 gtcttgggat catgtatgga acttcggtgt tagtcgccgt atgatggcta ccggcttcct
     2701 ttacgatccg gcgttcctcg agcacgatac cggctttggt cacccagaac gccgcgagcg
     2761 cttatcggta accatggatc atctgcaaaa acagtcctgg ttcgccgagc gtctcaaacg
     2821 catcactcca aagccggccg cgatcacatg gatccagcag atccacgagc caaactatat
     2881 cgagcgggcc agggccacat gtgcagcagg ctaccgctat cttgattccc tcgatgtcag
     2941 tatctcacag cggtcttttg atatcgctct acttgctgca ggcggcgccc tagagctcgc
     3001 agatcgcctg atggcaggcg agatagataa cggctttgcg ctgctccgcc cacctggaca
     3061 ccatgccgag cttggcatgg cgctcgggtt ttgcttgttc aacaacgtgg cgatcctggc
     3121 gcgctatctc caaaagcagt atggacttga caagatcctg atcctcgact gggatgttca
     3181 tcacggcaac ggcactcagc ataccttcga agaagatccc tccgtgctct atgtgagcct
     3241 ccaccagtac cctttctatc ccggcacagg agcctattcg gagacgggca ttggcaaagg
     3301 cgcaggcgcg accctgaact gtcccatgtc agcgggtgcg accgatacag actaccaagc
     3361 ggccttcacc gagcggatcc tgcccaagct caataggttt aaaccggagg ccgtgcttat
     3421 ctcagcggga ttcgatgccc acgcggaaga cccgctcgct cagatctgtc ttagcactga
     3481 atgctttggg tggatgagcg cgcgcatgat ggaggtagcg gaaacgcacg cagggggtcg
     3541 tctcctctcg ctacttgagg gtggatacaa tctgcacgcg ctaccgcttt gtattgcgaa
     3601 acacctgacc gtattggcca atgtagaaga cgcaacgcca gtcactcgac gcgataatgg
     3661 ctaggatgcc ttttatcgga ctgacgacag cgggggaatc ccgtacagtg tctgtaggtg
     3721 ttagtattac cccaataggt gacactatag cctgtctcgt atgactttca cttttattac
     3781 tatccgatcg tgtcctgggg gttctactct tctgactctt ccat
//
LOCUS       DASQSL010000604         1155 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_29997, whole genome shotgun sequence.
ACCESSION   DASQSL010000604 DASQSL010000000
VERSION     DASQSL010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29997"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(555..753)
                     /locus_tag="VE844_06220"
                     /pseudo
     CDS             complement(555..753)
                     /locus_tag="VE844_06220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007917126.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
     gene            815..>1155
                     /locus_tag="VE844_06225"
     CDS             815..>1155
                     /locus_tag="VE844_06225"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC00955.1"
                     /translation="MNRSPHDWKEARRLQAWRLKPQGWAQRQIATALGVSEGAVSQWM
                     RRARQGGPEALRHHPSPGAPRRLTADQLAQLPALLERGPEAYGFRGQLWTRSRIAAVI
                     QLTFGISYHPR"
BASE COUNT          232 a          350 c          317 g          256 t
ORIGIN      
        1 agaacattcc ctgggaacct ttcagccctt gtctttattg accttctgtc gaaagccttt
       61 ttctcgcgaa agagctgatc ttttacgaaa tcctaaatga tcaattgctg ctgagaaaac
      121 atctaggctc catatagaac ctatggtctc gtcttcatcg acaacaaaat caaatagata
      181 gacttctcgc gtaactttct ggtccgctgc tactcacggg cctaccaggg gccgggtttc
      241 tggtaccagg actggcgccg gagcaccccc attggcaatc tcagtcaaaa tgaaatccaa
      301 gatggtcaaa gcttggtggc tcaccatcgg tttcggtgaa gcgggtgacg cttgcctcat
      361 tacggccttc ttccccgatg gccggcacac ctctcccatt cgataggcat tgataattac
      421 tgagacttcc tcctcagcct acccatccag tatgctcgcc ttaatgcatc ttgaactgct
      481 cacctggtag aaaagtaggc aagggctcct gcgcgcggcg cttatgcggc catgcccgaa
      541 cgcgtaattt cctgtcagat ttggaagcgt tgccgcatct cctgacggta tgcgggggcc
      601 gagagtcggt agcgtctggg gcggaaatgt gaggtaacag gcccataggc cgcgagggag
      661 cgctgggcat ggcctggaga tttatttgaa ccgctgcatc cgttgctcgc gccggcgcgt
      721 ctgctggtgg gaattttccg cgcgattatt cagatattac tgacccggac gttaatcgct
      781 aaagcctcac catttttgtg gtagactgcc atgcatgaac cgttcacctc acgactggaa
      841 ggaagcccga cggttgcaag cctggcgcct caagccgcag ggctgggcgc agcgccagat
      901 cgccacggcc ctgggggtca gcgagggggc ggtcagccag tggatgaggc gcgcccgcca
      961 gggaggaccg gaggccctcc ggcaccaccc ctcacccggc gcccctcggc gcctgactgc
     1021 cgaccaactc gcgcagctgc ctgccttgct ggaacgcggt cccgaagcgt atggtttccg
     1081 ggggcaactc tggacccgca gccgcattgc tgccgtgatt cagctcacct ttggcatctc
     1141 ctaccatcca cgcca
//
LOCUS       DASQSL010000605         1572 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_182184, whole genome shotgun sequence.
ACCESSION   DASQSL010000605 DASQSL010000000
VERSION     DASQSL010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1572
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182184"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            269..901
                     /gene="folE"
                     /locus_tag="VE844_06230"
     CDS             269..901
                     /gene="folE"
                     /locus_tag="VE844_06230"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013220659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HZC00956.1"
                     /translation="MNKPLMDILAEGHYAANLDAVPGESYDTEFESLVQKMLLHLGED
                     PGREGLERTPQRVAKAMDFLTSGYRMSVEDVVKDSLFSEDSDEMIVVKDIEFYSLCEH
                     HMLPFVGKTHVGYLPREQVIGLSKIARIIDVFARRLQLQERLTNQVATALMEVLKAKG
                     VGVVMEASHFCMIMRGVQKQNSLTVTSAMLGSFRADTRTRAEFLELIKRS"
     gene            958..1245
                     /locus_tag="VE844_06235"
     CDS             958..1245
                     /locus_tag="VE844_06235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013105445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HZC00957.1"
                     /translation="MNKRELTQFVAKATKLSETQAGKTISAVLEGIKKALGKGESVSL
                     VGFGSFGVRKRAARSGRNPRTGKPLKIPAAKVPVFRPGKGLKEVAKGKSGK"
     gene            1302..>1572
                     /locus_tag="VE844_06240"
     CDS             1302..>1572
                     /locus_tag="VE844_06240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018299528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00958.1"
                     /translation="MKIQRYCKSLLLLELLKGLAITGRHLFTKKITVFYPEEKTLQSG
                     RFRGLHALRRYPNGEERCVACKLRPISGEPALSVTGVSLASPCSVE"
BASE COUNT          387 a          408 c          475 g          302 t
ORIGIN      
        1 gatcgcccag gtctcgccgt cgcgttggtc ctcggccgcc agcagccggt ggcttactga
       61 acagcttagt taaattcaag tcaatcctaa atcaaagtat tagtggatga gcaccaaaaa
      121 cagcggcaag gaataaaatc agaaactaag ccgacaggga gtggcgaagc tcaagagatt
      181 tattgaggct agttcaaacc aacaactggg ctagcccatg gcattgggaa aggggcaact
      241 caagagcgga gaaggcggag aaaaagagat gaataagcca ctgatggaca tactggccga
      301 gggccactat gcggccaacc tcgacgcggt acccggcgaa agctacgata cagaattcga
      361 gtccctggtg caaaagatgc tgcttcacct cggcgaagac cccgggcgcg aggggctcga
      421 gcgcacgccc caacgagtgg ccaaggcgat ggatttcctc accagtggct accgaatgtc
      481 agtggaggat gtcgtcaagg attccctctt ctcagaagac agcgacgaga tgatagtggt
      541 caaggatatc gagttttact ccctctgcga acaccatatg ctccctttcg taggtaagac
      601 ccacgtcggt tatcttcccc gggagcaggt gatcggtctc tccaagattg cccgtatcat
      661 cgatgtattt gcgcgtcgcc tccagctcca ggaacgtctg accaaccagg ttgctacggc
      721 gcttatggag gtgctcaagg ccaagggcgt gggcgtggtg atggaggcga gtcacttctg
      781 catgatcatg cggggggtgc agaagcagaa tagtctcacg gtgacgagcg cgatgttggg
      841 aagcttcagg gcggatacgc ggacccgcgc tgaattcctg gaattgataa agcgctccta
      901 attgggctta caacccctac tttgagtaga agataacgtg atccgaaggg aggacctatg
      961 aataagcgtg aacttaccca atttgtcgct aaggcgacta agctgtcgga aactcaggca
     1021 gggaagacca tcagtgcggt gctcgagggc atcaaaaagg ccttgggcaa gggagagagc
     1081 gtgagcctcg tcggttttgg gtcattcggg gtacgcaagc gagcggcccg gagtggacgc
     1141 aacccaagga caggcaagcc cctcaagatc cccgcggcca aggtgcctgt ctttcgcccc
     1201 ggcaaagggc tcaaggaggt tgcgaaggga aaatcgggca aataaccggg gttggtcatc
     1261 gatcccatca acgcggaggg caggtcgtgt ccaagctagc actgaagatc caacgctact
     1321 gcaagagctt gctgctgttg gagcttctca aagggctcgc aatcacgggg cggcacttgt
     1381 tcacgaagaa gatcacggtc ttctatccgg aggaaaagac gctacaatcg gggcgttttc
     1441 gcggcctcca tgcgctgcgg cgctatccga acggagaaga gcggtgtgtc gcctgcaagc
     1501 tccggcctat ctcgggtgaa ccggcccttt cggtcaccgg tgtctcacta gcatcgccat
     1561 gctccgttga aa
//
LOCUS       DASQSL010000606         3185 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_182193, whole genome shotgun sequence.
ACCESSION   DASQSL010000606 DASQSL010000000
VERSION     DASQSL010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3185
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182193"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..259)
                     /locus_tag="VE844_06245"
     CDS             complement(<1..259)
                     /locus_tag="VE844_06245"
                     /inference="COORDINATES: protein motif:HMM:NF024940.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC00959.1"
                     /translation="MRKSLSPSERGFNARDWQHLSQVLTQAVEARLFRRIQAVLLVAE
                     GRTFVETAHITGLSRQAVYKLVHRYLQSHQVESLHDRPHPGR"
     gene            complement(290..2758)
                     /locus_tag="VE844_06250"
     CDS             complement(290..2758)
                     /locus_tag="VE844_06250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018005583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase-like activity of phytase family
                     protein"
                     /protein_id="HZC00960.1"
                     /translation="MLSVKIRSTRHKLTATALTIVLLNVGSNMPTSAADQLVGRAVLP
                     VATFSHGPTSGQYLGPGPINGQTVPFEHKQPVQGFSAVLSNGDSTFMVMSDNGFGSLE
                     NSADYQLRVYRIRPHFKTKEGGSGGIAVLGHIELHDPDEKIPFAITNHFTKQRLLTGA
                     DFDIESMQRAPDGTLWFGDEFGPFLLHTDAKGKVLEAPIPLPDLANPGKEIRSPQNPF
                     NEEASALRVMNAMRTHAQGHHNHKTPVFSPWHVMIDDGNPAIKTGDREEPPVGSGLAQ
                     ASSEIFNVKSIQQAGYPVVTWTVNDKARMLELMGLGVNGIISDRPDLLLQTAQAFDVN
                     QDGTPGDFIGADGLIDLTKFDAQGHRGGRDLRPENTLPAMEVALDHLMTTLETDIGIT
                     RDGISMLDHDPHVEAAKCRRADGAPYELVNQRLVKDLTLSELQSTFICDKIIRDPAFQ
                     KNDLALSPVSVAFAALHGLMHPYVMPTVQQLFDFVKFYQKYYKNSAGNRHPHAALRAQ
                     NAAKVRFNIETKINPRAELVARTVGPLKFASALANMIVANKLEERADIQSFDFRTLLV
                     VQKKYPAIRTVYLFGDFPIYPNDPTNPNSDNGTNLQDENGTNTPWLAGLFWPYRVTQI
                     DHPFLAQRSGGFEGMALSLDRTTLLPLLEKPLVEGELNTLLIRPFDLTTKSYTGTQYK
                     YLLDPRGRAIGDFIMYSKDHGLVIEHDDTQGDLKGFKAVFNIKLGAPGEAVQKDLLVD
                     LLDLHDPDGLSLVGSQPGDVGLGFSFAFSFVTIEDIVVFDRKHIGVLNDNNFPFSVGR
                     HVGSGEPDDNEFIIIRLSECTKLF"
     gene            complement(2783..>3185)
                     /locus_tag="VE844_06255"
     CDS             complement(2783..>3185)
                     /locus_tag="VE844_06255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012643000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alkaline phosphatase PhoX"
                     /protein_id="HZC00961.1"
                     /translation="NPDHYTFFAGFDPSQASSIANPDNLIFDDEGNLWIATDGQIKVE
                     DFGWNDGVFAVPTEGLERGFLRQFLSAVPGAEVCGPEFSGDNRSFFCNIQHPGEEGGL
                     PNKTSSWPDGKDPPRPSVIAVRHTLGRKIGR"
BASE COUNT          700 a          839 c          908 g          738 t
ORIGIN      
        1 gccgtccggg gtgtggtcga tcgtgcaggc tctcgacttg atgcgactgc aaatatcgat
       61 ggactagctt gtaaactgct tggcggctca aaccagtgat gtgagctgtc tcaacaaacg
      121 tccgaccttc agcgaccagg agcaccgctt gaatgcgacg aaagagacgt gcctcaactg
      181 cttgggttaa tacctgtgag agatgttgcc agtcgcgcgc attaaaccca cgttcagatg
      241 gactcagtga tttcctcatg agcccaggtt attatcaaag agccatttgt caaaataatt
      301 ttgtacattc acttagtctg atgatgatga attcattgtc atcaggttcg ccgctaccca
      361 catgacggcc cacgctgaaa ggaaagttgt tgtcgttcag cacaccgatg tgcttgcgat
      421 cgaataccac gatgtcctcg atggtgacga acgagaaggc gaaactaaac ccaaggccta
      481 catcccctgg ctgacttccg actagggaga ggccatctgg atcgtggagg tcgagcagat
      541 ccaccagcag atctttctgg accgcctccc ctggagctcc aagcttaata ttgaagactg
      601 ccttaaagcc tttcagatcg ccctgggtgt cgtcatgttc gatgacgagg ccatggtctt
      661 tgctatacat gatgaaatca ccaatagcgc gaccacgcgg atcgagcagg tacttatact
      721 gagtgccggt gtagctcttc gtggtcagat cgaaggggcg gatcagcagt gtatttaact
      781 caccctcaac caagggtttt tccaggagtg gcagcaaggt cgtgcgatcc aggctcaatg
      841 ccataccctc gaacccacca ctgcgctggg cgaggaacgg atggtcgatt tgggtaacgc
      901 ggtagggcca gaaaaggcca gcgagccagg gtgtgttggt cccgttttca tcctgcaggt
      961 tagtgccatt atcggaattg ggattggtgg ggtcattcgg atagattggg aaatccccaa
     1021 acagataaac agtgcggatc gcgggatatt ttttctgtac taccaataag gtacgaaagt
     1081 caaaactctg aatgtccgca cgttcttcta gcttgttcgc cacaatcatg ttggccagcg
     1141 cgcttgcgaa ctttagggga ccaacggtac gtgccaccaa ctccgctcgt ggattgatct
     1201 tagtctcgat attgaagcgc accttagcgg cattttgagc gcgcagtgcc gcgtgcggat
     1261 ggcggttccc cgcactgttt ttatagtact tttggtagaa tttaacgaag tcaaacagtt
     1321 gctggaccgt cggcatcaca taaggatgca tgagcccatg caaagcagcg aaggccactg
     1381 agaccgggga cagtgctaga tcgttcttct ggaaagcggg gtcacggatg atcttgtcgc
     1441 agatgaaggt agattggagt tcagagagcg tcagatcctt tactagcctc tgattgacca
     1501 actcataagg ggctccatcg gcgcggcggc acttggcggc ttcgacgtgg gggtcatggt
     1561 cgagcatcga gataccatct ctggtaatgc caatatcggt ttctagcgtt gtcatcagat
     1621 ggtctaaggc cacttccatc gccggcaagg tattttccgg acgcagatcg cggccgccgc
     1681 gatggccctg ggcatcgaat ttagtgaggt cgatcaggcc gtctgcgcca atgaaatcac
     1741 ctggggtgcc atcctgattc acatcaaacg cctgcgcggt ctgcagcagc agatcaggtc
     1801 ggtctgaaat aatgccgttg accccgagcc ccatgagttc cagcatgcgg gccttgtcat
     1861 taacggtcca ggtgacgacc ggatatcccg cctgctggat ggatttgacg ttgaagatct
     1921 cgctcgaggc ctgcgctagc ccagaaccca cagggggctc ttcccggtcc ccggttttga
     1981 tggcggggtt cccgtcatca atcatgacat gccaggggga gaagaccggt gttttgtgat
     2041 tgtggtgccc ttgtgcatgg gtacgcatgg cgttcatcac ccttagggca ctcgcttcct
     2101 cgttaaaagg attctggggc gagcggatct ccttaccagg attggcaaga tcaggcagtg
     2161 ggatcggcgc ctccaggact ttgcctttgg catcggtgtg caggagaaag ggaccaaact
     2221 cgtcgccgaa ccagagcgtt ccatctggcg cgcgctgcat agactcgata tcgaaatccg
     2281 caccggtcag taggcgttgt ttagtgaaat gattggtgat agcgaagggg atcttctcgt
     2341 ccgggtcatg gagctcaatg tgtcctaaca cagctatgcc cccactgccg ccctccttag
     2401 tcttgaaatg cgggcggatt cggtataccc gtaattgata gtccgcggaa ttttccaggc
     2461 tgccgaaccc gttgtccgac ataaccataa aggtgctatc cccattgctc agcaccgctg
     2521 aaaagccttg cacaggctgt ttatgttcaa agggcacggt ttgcccgtta atcggtccgg
     2581 ggccaagata ctgaccggag gtggggccat gggagaaggt agcgaccgga agtactgcac
     2641 gcccgaccag ctggtcggca gcgctggtcg gcatgttgga gcctacatta aggagcacga
     2701 tggttaaagc ggtggctgtc aacttgtgcc tagtagaccg aattttcacg gataacataa
     2761 ctttcctccc ttcaaggcgc gctcaacgac cgatctttct ccccagggtg tgtcgcactg
     2821 caatcacact aggcctcggc gggtctttcc cgtccggcca ggagctggtc ttgttgggca
     2881 gcccgccctc ttcacctggg tgctggatgt tacagaagaa gctgcggtta tccccggaga
     2941 actcgggccc acagacctca gcgcccggaa cggcactcag aaactggcgc agaaatccgc
     3001 gctcaagacc ttctgtcggc actgcaaaga cgccgtcgtt ccacccgaag tcttcgacct
     3061 tgatctgccc gtcggtggcg atccagaggt taccctcgtc atcgaagatg aggttgtcag
     3121 gattggcgat ggagctggcc tggctcgggt cgaaaccggc gaagaaggtg tagtggtctg
     3181 gattc
//
LOCUS       DASQSL010000607         1315 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_99940, whole genome shotgun sequence.
ACCESSION   DASQSL010000607 DASQSL010000000
VERSION     DASQSL010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1315
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99940"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..313
                     /locus_tag="VE844_06260"
                     /pseudo
     CDS             1..313
                     /locus_tag="VE844_06260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018216018.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="integrase core domain-containing protein"
     gene            complement(503..>1315)
                     /locus_tag="VE844_06265"
     CDS             complement(503..>1315)
                     /locus_tag="VE844_06265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018657034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZC00962.1"
                     /translation="GAQLRRLRETRGITAGEAGSAIRASHAKISRMELGRVGFKERDV
                     AELLTFYGISDAQQREAFLALARRAKVPGWWHQYSDIVPSWFEMYLGLEQASSVIRMY
                     APQFVPSLLQTRQVARTIIQLDYPSASADDIERRVTLRITRQEIFAQPNAPNLWAVID
                     EAALWRSDGHSAMRAQIQHLIKMAELPNVTLQVIPIRSGAHAAAGGPFTILRFSEPDL
                     PDIVYLEHLTSALYLDKIQDVEHYLMVMDRLCVQDKSPAETTKFLRNILQEL"
BASE COUNT          269 a          393 c          383 g          270 t
ORIGIN      
        1 aagcggtaca gcggattcct actcgttgcc cgcgggcgaa ctgcttcgcc gaacggttcg
       61 tgcgcaccct cagagccgaa ttcaccgacc gcatgttgat cttcagtcag cgacacctgc
      121 gtgtggtgct caccgagtgc gttcgccacg acaacggtcg acgactgcac cgtgcccgcg
      181 aacttcgccc accacaaccg gatcacccgt ggcggacctc aaccatgaac ggatcaaacg
      241 tcgtacggtg ctcggtggct tgatcaacga gtacgaacgc gggtggcgtg aagctgctgc
      301 tcagcgcagg tagcccactt tcggaacccc acaggtatcc gcgccgcggt cggacactgc
      361 atcgcccacc tctagatcaa ctagaaccgg gaggtactgg caccgcactc gaatcctacg
      421 actcaactgt gtcagttctt gataacgctc cgaggtgtac gaattttcgt ggtggagcac
      481 aaagtcttga ctggctctgc attcacagct cttggaggat gttccttaaa aacttggttg
      541 tttcggcggg ggatttgtcc tggacgcata atcgatccat gaccatcaag taatgctcca
      601 catcttggat cttgtccagg taaagggcgc tggtcaggtg ttcaaggtag acgatgtccg
      661 gcaggtcggg ttcggagaac cgcaagatcg tgaacggacc acctgccgcg gcgtgtgcac
      721 cagaacggat cggtatcact tggagtgtga cgttgggcag ctcggccatc ttgatcaaat
      781 gctgaatctg tgcccgcatg gcggaatgtc catctgagcg ccatagcgcc gcctcgtcga
      841 tcacagccca caggttgggc gcattgggtt gggcaaaaat ttcctgacgt gttatccgca
      901 gtgtgacccg gcgttcgata tcgtcagcgg atgcgctggg atagtcgagc tggatgatgg
      961 tgcgggccac ctggcgggtt tgcagcaagc tgggcacgaa ctgtggcgca tacatgcgga
     1021 tgaccgaact agcctgctcc aagccgaggt acatttcgaa ccaactcggc acgatgtcac
     1081 tgtactgatg ccaccaaccg ggcaccttcg cccgccgagc caacgccaga aacgcttctc
     1141 gttgctgtgc gtcgctaata ccgtagaagg tgagcaactc tgccacgtcg cgctccttga
     1201 agccaacccg ccccagttcc atacggctga tcttggcgtg ggacgcccgg atcgcggagc
     1261 cggcttcccc ggcagtgatg ccacgcgttt cacgaagccg acgtagctga gcgcc
//
LOCUS       DASQSL010000608         1052 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_194519, whole genome shotgun sequence.
ACCESSION   DASQSL010000608 DASQSL010000000
VERSION     DASQSL010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194519"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..924)
                     /locus_tag="VE844_06270"
     CDS             complement(<1..924)
                     /locus_tag="VE844_06270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00963.1"
                     /translation="MKSDGYERVRIFTLGGVWITVRARYYCRACDRRSGKRYKGVYGG
                     LVLLGIHDHCTPGLAATVSAWSALLSSLAEVRQVLLEQGMNLGVKVVRKLAYRYAERA
                     RVVQQAGQIALAEGDKMQGRRVVVSADGGRLRLRENKRGAKTKKGRTRYRGAWREPKL
                     LIIYVVDAHGKLKKSFAPLIDGHLQGPEALFRLLQAYLQSLEIHQADHILFIADGAHW
                     IWGRIPKLVATLGLDPQRVHLLIDFYHATEHLGKLAALRKNWSAQQRPAWIRTQRRRL
                     WTGHVDKVVEAIQVFGRGRNSKAMMTERDYFV"
BASE COUNT          225 a          354 c          240 g          233 t
ORIGIN      
        1 aacaaaataa tcccgttccg tcatcatcgc tttgctgttt cgcccgcgac caaacacctg
       61 gatggcctcc accaccttat cgacgtgtcc cgtccacaac cgacggcgtt gggttcggat
      121 ccaggcgggg cgttgctgag ctgaccagtt tttacgtaag gcggccagtt tccccaaatg
      181 ctccgtggca tgatagaagt caatcaagag atggacgcgc tgggggtcca aaccgagcgt
      241 tgccaccaac ttcgggattc taccccatat ccagtgggca ccatcggcta taaacaggat
      301 gtgatcggcc tggtgaattt caagggactg taaataggcc tggagcaatc ggaacaatgc
      361 ctcaggccct tggaggtggc cgtcgatcag gggggcaaaa ctctttttca gtttcccatg
      421 cgcatcgacc acatagatga tcaaaagctt cggctcacgc caagctcccc ggtaccgagt
      481 ccgccccttc ttggtcttgg cgccccgctt gttctcgcgt agccgcaggc gacccccatc
      541 cgcactcact accacccgac gcccctgcat cttgtctccc tcagccaatg caatttgccc
      601 cgcctgctgc accacacgcg cccgctccgc atagcggtag gccaatttcc gcacgacctt
      661 cacgcccagg ttcataccct gctccaacaa cacctgccgc acttccgcca acgagctcag
      721 caacgccgac cacgcactca cggtcgcggc taatcccggt gtgcaatggt catgtatccc
      781 taacagcacc aggcctccat acaccccttt ataccgcttc ccactccgcc gatcacaggc
      841 acgacagtag taacgggccc ggaccgtgat ccaaacaccc cccagcgtaa aaatccgtac
      901 cctctcgtag ccatcgcttt tcaaccgtcc aggccagcat cgtatcagtt cctcttcctt
      961 cttctggtgc tcttcacaat ccaaactgag gtagtgtttt aattctgttg ggttacaatt
     1021 ttaaggaggc gggagattga tgactcattt tt
//
LOCUS       DASQSL010000609         1116 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_127717, whole genome shotgun sequence.
ACCESSION   DASQSL010000609 DASQSL010000000
VERSION     DASQSL010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127717"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..236)
                     /locus_tag="VE844_06275"
     CDS             complement(<1..236)
                     /locus_tag="VE844_06275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00964.1"
                     /translation="MGDGKLVVPVDFAIRRPDPTGPGGPCRDKLRWVQVMLDGRVAAL
                     RRRRVELSPPMVVADSWFSGSVSFRATLISSSSR"
     gene            379..783
                     /locus_tag="VE844_06280"
     CDS             379..783
                     /locus_tag="VE844_06280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011638781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HZC00965.1"
                     /translation="MIKDVDLHRDLEGLPMLKERYGHPSDEESQKSFARLADYRDGGI
                     FATHFSGSSGWERHPNGDEVVQILEGATRFDIIVEDVLQALELSAGMMVVVPKGCWHR
                     FESETGVKVMTITPTPTQHTHVDDPRTEVGHN"
BASE COUNT          264 a          295 c          328 g          229 t
ORIGIN      
        1 caccgcgagc tggaggaaat caaagtggcg cgaaagctga cagaaccgct aaaccagcta
       61 tcggccacga ccattggcgg ggacagctcc acacggcgtc ggcgcaaggc cgccacgcgc
      121 ccgtccagca tgacctgcac ccagcgcagt ttgtctcggc aaggtccccc tgggcctgtg
      181 gggtcgggcc gacggatggc aaagtccacg ggaacgacta acttgccatc acccatccca
      241 tcggggatag gaggatttat ccaaaaaatt ctgtatgacg taatagttgt tgagtagatt
      301 atcttactga tatagccttc aacaagagat actgtattct attagaaagc gattgtttca
      361 taggaaaagg gataaagcat gattaaagac gttgatttac accgcgatct cgaaggcctc
      421 ccgatgctca aagagcgcta tggtcaccca agcgatgagg agtcgcaaaa atcatttgcc
      481 aggctcgcag actatcgtga cggtggcatt ttcgccacgc attttagcgg tagcagtgga
      541 tgggagcggc atccgaacgg ggatgaggtc gtgcagattc ttgagggggc cacacgattt
      601 gacattatcg tcgaggatgt cctgcaggca cttgagttgt cggcaggcat gatggtggtc
      661 gtgcccaagg ggtgttggca tcgattcgaa tccgagaccg gcgtgaaagt gatgaccatc
      721 acgccaacac ccacgcaaca tacccatgtt gatgatccaa ggacggaagt cgggcataac
      781 tagagtcctt gcacaggtgt tgtctttcga tcgaatgggg aaaatgcgtc tcggcttgca
      841 gaacgaaaag ggtcaccgcc tatacagtcc acaaccgggg acgtttttcg tcaactgctg
      901 accgggcagg agaatgctct tgggagccat gaggcgcaac aagccctgtt agtggaaacc
      961 cggccacttc gcccagctgg caccccagcg tccgctgcag tgtgcggtga ggccctcggt
     1021 gtccgcgggc tttttccctg gcatggccgg cacgtcggac agggctaggc tcgctgaatt
     1081 tcgcacatga ggccgtccca ctccgtggag ccgatt
//
LOCUS       DASQSL010000610         1638 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_99972, whole genome shotgun sequence.
ACCESSION   DASQSL010000610 DASQSL010000000
VERSION     DASQSL010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1638
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99972"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            86..1627
                     /gene="atpA"
                     /locus_tag="VE844_06285"
     CDS             86..1627
                     /gene="atpA"
                     /locus_tag="VE844_06285"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012639836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HZC00966.1"
                     /translation="MQISAVEISELIKEKIQHYELPTEARTEGTVISLTDGIARLHGL
                     SDVMQGEMIEFPGKVYGLALNLERDTVGAVIMGAYEHIKEGDVVRCTKRILEVPVGRV
                     LLGRVVDALGNPIDGKGPIATAETLPLEKIAPGVIARLSVSQPVQTGLKAIDAMVPIG
                     RGQRELIIGDRQTGKTALAIDTIINQKGTGIKCIYVAMGQKASSINTVVHKLNEHGAM
                     EHTVVVAASASESAAMQHIAPYAGCTMGEYFRDRGEDALIIYDDLTKHAWAYRQISLL
                     LRRPPGREAYPGDIFYLHSRLLERASRLNSAEVEKRTEGRITGKTGSLTALPIIETQA
                     GDVSAFIPTNVISITDGQIYLETDLFNAGIRPAINAGLSVSRVGGAAQTQVIKKLGGG
                     IRLALAQYRELAAFAQFASELDKATRKQLERGQRVTELMKQKQYSPMSVAEMAVSLYA
                     VDQGYLDDVAIPQIVAFEEALLSFVKAEKVDLNRLINETGDYNDDIDNRLKAAVEEFK
                     LNHAW"
BASE COUNT          359 a          450 c          496 g          333 t
ORIGIN      
        1 ccgtacgcgg acgtttgcaa caattggcaa gccaactagc ttgaacagtt ttgaatctat
       61 tattttattg acgtgagtgt gacccatgca gatcagtgcg gttgaaatca gcgagctaat
      121 caaagagaag atccaacact atgagcttcc gaccgaggca cggacggaag ggacagtcat
      181 cagtctaacc gatgggattg cccgcttaca cggtttgagc gatgtgatgc aaggggaaat
      241 gattgaattc cctggcaagg tctatgggtt ggcgctcaac cttgaacgcg atacggtcgg
      301 tgccgtgatc atgggcgcct atgagcatat caaggaaggc gatgtggtcc gctgcaccaa
      361 gcggatcctg gaggtgcctg taggtcgggt gctgctcggg cgggtggtgg acgccctggg
      421 caaccccatt gacggcaagg ggccgattgc tactgctgaa accttgccct tggagaagat
      481 cgcccctggc gtgatcgccc ggctctcggt gagccagccg gtccagaccg gacttaaagc
      541 catcgatgcc atggtgccga tcggacgcgg ccagcgcgag ctcatcatcg gcgatcgcca
      601 gaccggcaag accgcgctgg ctatcgatac catcatcaat cagaagggca cgggtattaa
      661 atgtatctat gttgccatgg gccaaaaggc ttcctcgatc aataccgtgg tgcataagct
      721 caacgagcac ggcgctatgg aacataccgt ggtggtggcg gcgagcgcct cggagtcggc
      781 ggcgatgcag cacatcgctc cctatgcggg gtgcacgatg ggtgaatact tccgcgatcg
      841 gggcgaggat gcgcttatta tctacgatga tctcaccaag cacgcgtggg cgtatcggca
      901 gatctcgctg ctactgcggc gtccaccggg ccgtgaggcc tatcctggcg atatcttcta
      961 tctccattcg cgcctcttgg agcgggcctc gcgtctcaat agcgccgagg tcgaaaagcg
     1021 cacggagggc aggatcacag gcaagaccgg ctcgctcacg gcactcccca tcatcgagac
     1081 ccaggccggc gacgtatcgg cctttatccc gaccaacgtg atctcgatca ccgatggcca
     1141 gatctatctc gagaccgatc tgttcaatgc cgggatccgc ccggcgatca acgccggtct
     1201 gtcggtttct cgcgtcgggg gagcggccca aactcaagtc atcaagaagc tcggcggcgg
     1261 tattcggctc gcgctggctc agtatcgaga attggctgcc tttgcccaat ttgcttccga
     1321 gctcgataaa gccacccgca aacagcttga acgcggtcag cgggtgactg agctcatgaa
     1381 acagaagcag tattcgccca tgagtgtggc ggagatggcg gtcagcctct atgccgtcga
     1441 tcagggctat ctcgatgatg tggcgatccc ccagatcgtt gcctttgaag aggcactctt
     1501 gagctttgtg aaggccgaaa aggtggacct caaccgcttg atcaatgaga ccggtgacta
     1561 taacgatgac atcgataacc ggctcaaggc ggcggtagag gagttcaagc tcaatcatgc
     1621 ctggtaagcc gagaaggg
//
LOCUS       DASQSL010000611         1690 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_18934, whole genome shotgun sequence.
ACCESSION   DASQSL010000611 DASQSL010000000
VERSION     DASQSL010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1690
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18934"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            797..>1690
                     /gene="proB"
                     /locus_tag="VE844_06290"
     CDS             797..>1690
                     /gene="proB"
                     /locus_tag="VE844_06290"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005958545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004349 - glutamate 5-kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HZC00967.1"
                     /translation="MNQTRKALAQTRRWVVKIGSALATNNGQGLRLDSIDVWAAQAAQ
                     LCRAGYEIVLVTSGSVAEGVVRLGWKARPHTLDELQAAAAVGQMGLVQAYEACFQKQG
                     LRTAQILLTHEDFFDRKRYLNAWSTFRTLLSLGVVPLVNENDTVATDEIRFGDNDTLA
                     GLVANLVEARLLVILTDQEGLFERDPRKDPTAKLVTEARAGDPSLAVMAGRGGAWGRG
                     GMQTKLGAAALAARFGTTTIIASGQAPEVLVRIAQGEQIGTRLTPTQEPLTARKQWTP
                     RKQWLAGGIRPRGKLMLDEGAV"
BASE COUNT          383 a          465 c          516 g          326 t
ORIGIN      
        1 caggtacccc catggggagt gcgcacttca aagaacagat tgcgaagacg ctgagcagaa
       61 aggtgagtgg cgagaatgtg gcaggcccgc caaggcttaa gccatgtagc aagcgtagaa
      121 tgcgctccac gcaccattta atgagcagga atgagtgagg gtatttatcc cgtggatcag
      181 gtgggtgata agctcgccag ccttcgcagg attatcttcg gcagtgaatt gaattacata
      241 gggtatttgc ctaagctggg gagaatcaag aaacgaggaa taaaaggtag aaaagaagat
      301 agaaaagggg gccaggctcg attttttcgg gtataccgcg cttcatgccc cgacgccctc
      361 gcattcacct ggccggtgtg ccgctacaca gtgcccagcg tggccaaaac cgcgaggcct
      421 gtctctatcg gtgaagatga ctccttggcc taccctcacc ggctgggcga agccctcaaa
      481 gaaagcggtt gcgttctgca cgcctacgtg ctcctaagca atcctgggca tttgctgctg
      541 acttcaccgc acccaagaca tcccccggct catcatctcg tcagggcgag gctacgtggg
      601 gtacatcaac aaaacctatc accgcaccgg cacgctgtgg gacagccgct acacgtcctc
      661 acgggtgcaa gaagacacct actgactgct gtgccaacgc tatatcgagc tcaaccccgt
      721 acgtgccgcc atggtggacg acccggcgcg ctaccgttgg agcagctacc ctgattcagg
      781 aaaatgagca aacaccatga accaaacccg taaagccctc gctcaaaccc gccgttgggt
      841 ggtcaagatc ggcagtgcct tggctacgaa caacggtcag gggttaagat tggattctat
      901 cgatgtgtgg gcggcacagg cggctcagct ttgccgagcg gggtatgaaa tcgtgctggt
      961 gacctcggga tcggtcgccg agggggtagt acggcttggc tggaaggcgc gcccccatac
     1021 tctcgacgag cttcaggccg cagccgcagt aggccagatg gggctagtac aggcgtacga
     1081 ggcatgtttc caaaaacagg gtctgcgtac tgcccagatc ctgctcaccc atgaagattt
     1141 cttcgatcgg aaacgctatt tgaacgcatg gagcaccttc cgtaccttgc tctcacttgg
     1201 ggtggtgccg ctggtcaatg aaaatgatac cgtagccacc gatgagatcc ggtttgggga
     1261 taatgatact ttggcgggcc tggtggccaa tctcgttgag gcgaggctcc tcgtgatcct
     1321 caccgatcaa gaagggcttt ttgagcgcga tccgcgcaag gaccctacgg cgaagcttgt
     1381 cacagaggca cgcgcaggcg atccttcgct tgcggtgatg gcgggcaggg gaggcgcatg
     1441 gggtcgtggc gggatgcaga ccaagcttgg ggcggctgcg ctcgcagccc gattcggcac
     1501 aacgaccatt atcgcctctg gccaggctcc cgaggttctt gttcggatcg ctcaggggga
     1561 acagataggc acacgactca ccccgactca agagcctctg accgctagaa agcaatggac
     1621 ccctagaaaa caatggctgg cgggtgggat ccggccgcgg ggtaagctca tgctggatga
     1681 aggggcggtg
//
LOCUS       DASQSL010000612         1281 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_167075, whole genome shotgun sequence.
ACCESSION   DASQSL010000612 DASQSL010000000
VERSION     DASQSL010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1281
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167075"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            200..394
                     /locus_tag="VE844_06295"
     CDS             200..394
                     /locus_tag="VE844_06295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016740347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YezD family protein"
                     /protein_id="HZC00968.1"
                     /translation="MSPATGHSGDASELQSERLTDKIFRALSGIRYGSVEIVVHEGRV
                     VQIERTEKLRLDPASSDKRR"
     gene            512..997
                     /locus_tag="VE844_06300"
     CDS             512..997
                     /locus_tag="VE844_06300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00969.1"
                     /translation="MRNSVLWLALGSMAAYDFPVIAAATDEPLPAAVQERLEALELKV
                     RTLEWQLEVEQETKAADKAKQTATVSAGADGFALKSTDGASQLKLRGLLHADSRWFFE
                     GESPSNDDTFLLRRVRPIIEGTDFNIFDFRLTPDFAGGRTVIQDAYVDARFLPWLQLY
                     F"
     gene            1073..>1281
                     /locus_tag="VE844_06305"
     CDS             1073..>1281
                     /locus_tag="VE844_06305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008953865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00970.1"
                     /translation="MLSVANPLTAWAGVTLLNVSYDPTRELYQEINAAFAKHWTTKTG
                     EQITIQQSHGGSGKQARAVIDGLEA"
BASE COUNT          296 a          359 c          359 g          267 t
ORIGIN      
        1 attccgcgac tgtattaagg ctatgagtaa gcgagccagg caaactctct tatagataaa
       61 agttatatat ttttaattta atattctttc tagttaaaag aatgtcctga tatagttcgt
      121 tctgtctgat agccagcgcc gcatacagtg aggattgtag caagacaacc gctttatcgt
      181 ggttaggaga aaacaaaaga tgtcacccgc aaccggacac tccggagatg ccagcgagct
      241 gcagtccgag cggctgacgg ataagatctt ccgcgctcta agcgggatcc gttatggctc
      301 tgtggagatc gtcgttcacg agggacgagt ggtgcagatc gagaggaccg agaagctgcg
      361 cctcgacccg gcgagttccg ataaaaggag ataacggagc gattatcatc cgttttcaac
      421 gctgaccagg cgactggagg cttaatcgat taactgaatc taagcgagct gaccggacca
      481 ccggaggttc ttgtgagaag gagtgttttc catgagaaac tctgtcctat ggctcgcact
      541 cggaagcatg gcggcatacg acttcccagt gattgcagcg gcaacagatg agcccttacc
      601 cgctgccgtg caggagcgcc tggaggcgct cgagctcaag gtccgcaccc tcgagtggca
      661 gctcgaggtt gagcaggaga ccaaggcggc tgacaaggcc aaacagactg ccaccgtctc
      721 tgcaggtgcc gacggctttg ccctgaaatc tactgatggg gcctcccaac tgaaactccg
      781 cgggctgctg catgctgaca gccgctggtt cttcgagggc gagagcccaa gcaacgacga
      841 taccttcctg ctccggcgcg tccgtcccat catcgagggg acggacttca acatcttcga
      901 ctttcgcctc acgccggact tcgcgggcgg ccggacggtc atccaggacg cttatgtgga
      961 tgcccgcttc ctgccgtggc tccagctcta tttttaaccc ctacagatca tagcgaggag
     1021 aaatgccatg tttacgaaac acgtcttgtt agcgctgact ttaacgatct tcatgttatc
     1081 ggtcgctaac ccgctgacgg cgtgggccgg cgtgaccctg ctcaatgtct cctatgatcc
     1141 cacgcgcgag ctctaccagg agatcaacgc ggccttcgcc aaacactgga cgaccaagac
     1201 cggcgagcag atcaccatcc agcagtccca cggcggctcg ggcaaacagg cgcgcgcggt
     1261 gatcgacggg ctagaggccg a
//
LOCUS       DASQSL010000613         2628 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_85145, whole genome shotgun sequence.
ACCESSION   DASQSL010000613 DASQSL010000000
VERSION     DASQSL010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2628
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85145"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1694
                     /locus_tag="VE844_06310"
     CDS             <1..1694
                     /locus_tag="VE844_06310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020564812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyridine nucleotide-disulfide oxidoreductase"
                     /protein_id="HZC00971.1"
                     /translation="LSHGCAIRAERLRAQAMNEVPNFQSLLQAWGGVTLFYRKGMRDA
                     PSYRQNHEEIEKAMEEGIAWAQGMEPREAIPDSYGHLRAVRFEKLAPENGRWVSAGEV
                     VEVPLKSLFIAAGTSPNTIYESEHPETFEMDGLFYQRHEPVWDDGEINLRSVKDTKWP
                     KIGRPAPLTSYHRNGRYISFYGDNHPVYAGNVVKAMASAKDGYPYVVKLFEHKLNALD
                     PLKQKERDQALLAFQQKLDQELLATVVAVNRLTPTIIEVIVKAPMQARKFCPGQFYRV
                     QNFESLAPTVEGTVLAAEGLALTGAWVDKERGLISLIALEMGSSSKLCAQWKPGDPIV
                     VMGVTGTPTDIPSGKTVLLAGGGLGNAVLFSIGKALRAAGNQVIYFAGYKHPQDVFKV
                     KEIEEASDVIVWSVDKAPGVERIPTTRPQDKSFVGNILEAMLAYARGELGDTPIHLDD
                     VEHLIVIGSDRMMAAIKEARHGVLKPYLMHRHVAIGSINSPMQCMMKGVCAQCLCKHV
                     DPNTGEEYFVYSCYNQDQELDRVDFTHLNARLRQNSVQEKLSALWLDHLLEKGQR"
     gene            1691..2482
                     /gene="thiD"
                     /locus_tag="VE844_06315"
     CDS             1691..2482
                     /gene="thiD"
                     /locus_tag="VE844_06315"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013220188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HZC00972.1"
                     /translation="MKGRVLTIAGSDSGGGAGIQADIKTVTALGGYAATAITALTAQN
                     TVGVYGVVGIDPAFVASQIEVVLDDIGADCIKTGMLYSQAVVNAVCDVLEAKAAAMPL
                     VVDPIRVAKDGTVLLHDTATATLKRRLLGLTTVLTPNVPEAQVLTGVAIHDPEQMIEA
                     ASMLLISGPKAVLIKGGHLAGEKVYDVLVSHTGSKVFESPRIDTRHTHGTGCTLASAI
                     ATGIAQGMDIHAAVVRARNYVFEAIRHAPGLGQGQGPLNHNPWRD"
BASE COUNT          584 a          740 c          772 g          532 t
ORIGIN      
        1 tcttaagcca cgggtgcgcg atccgggccg aacgtctacg cgcccaggcg atgaatgaag
       61 tacccaattt ccagtctttg cttcaagcct ggggcggcgt caccctgttc taccgtaagg
      121 ggatgcgaga cgcgccttcc tatcgccaga atcatgagga gattgaaaag gcaatggaag
      181 agggtattgc ctgggcccag ggcatggagc cgcgcgaggc tatcccagac agttacggcc
      241 atctgcgggc agtgcggttt gaaaaactgg cgccagaaaa cggccgctgg gtgagcgcgg
      301 gtgaggtggt cgaagtgccg ctcaaaagcc tcttcattgc tgccggcacc tcacccaata
      361 ccatctatga gagcgagcat cctgagacct tcgagatgga cggcctgttt tatcagcgcc
      421 atgaaccggt atgggatgac ggcgagataa acctacgatc ggtcaaagac acgaaatggc
      481 ccaagatcgg tcggcccgct cccttgacct cgtaccatcg gaatggccgg tatatctcgt
      541 tttatggaga taaccatccg gtctatgctg gcaatgtggt caaggccatg gcgagcgcca
      601 aggatggata tccttatgta gtaaaattgt ttgagcataa actgaacgcg cttgatcctc
      661 tcaaacaaaa agagcgcgat caggcacttt tggccttcca gcagaagctc gatcaagagc
      721 tgctcgccac ggtagtcgcg gtcaaccgct taacgccaac catcatcgag gtgatcgtca
      781 aggccccgat gcaggcgcgc aaattctgtc ccgggcagtt ttaccgcgtg cagaactttg
      841 aatccctggc gccgaccgtt gagggcacgg tgctcgcagc agaaggcttg gcgctcactg
      901 gggcctgggt cgataaggaa cggggactga tctcgctcat cgcacttgag atgggcagtt
      961 cctcgaagct ctgtgcccag tggaaacccg gcgatccgat tgtggtgatg ggggtcacgg
     1021 gcacgcccac cgatattccg tcgggcaaaa ccgtactgct tgccggtggg ggtttaggca
     1081 acgccgtcct gttctcgatc ggcaaggcat tgcgggctgc aggtaaccag gtcatctatt
     1141 tcgccggcta caaacacccc caagacgtgt tcaaggtcaa agagatcgag gaggcctcgg
     1201 atgtgatcgt ctggtccgtg gataaggccc ccggggtcga aaggatccca accacccgcc
     1261 cacaagacaa gagctttgtc ggcaatatct tggaagccat gctggcctat gcccgaggtg
     1321 agctcggcga taccccgatc cacctcgacg atgtcgagca cctgatcgtc atcggttcgg
     1381 atcgcatgat ggcggcgatc aaagaggcgc gtcacggggt actaaaaccc tatctcatgc
     1441 atcggcatgt cgctatcggt tccatcaatt caccgatgca atgcatgatg aaaggggttt
     1501 gcgcccaatg cctgtgcaag catgtggatc ccaacaccgg cgaggaatac tttgtctact
     1561 cctgttataa ccaggaccag gagttggacc gcgtcgattt tacccatctc aatgcccgct
     1621 tgagacaaaa ttcggtgcag gagaaactgt ctgcgctgtg gctggatcat ctgctggaga
     1681 aaggccagcg ttgaaaggtc gggttctcac catcgccggc tccgattcag ggggaggagc
     1741 ggggatccag gccgacatca agacggtgac ggcgctcggc ggttatgcag caacggcgat
     1801 caccgcactg acggcacaga acacggtggg cgtttacggt gttgtcggca tcgatcctgc
     1861 ctttgtcgcg agccaaatcg aggtcgtgct cgatgacatc ggcgcggatt gcattaaaac
     1921 cggtatgctt tatagccaag cggtggtcaa cgccgtgtgc gacgtgctgg aagcaaaagc
     1981 ggccgccatg cccttagtgg tagacccgat tagggtcgcc aaggacggta cggtattgct
     2041 gcacgatacc gctaccgcaa ccctaaaacg gcggctgcta gggcttacca ccgtgctgac
     2101 ccccaatgta cccgaggccc aggtattgac aggagttgct atccacgatc ctgagcagat
     2161 gatcgaggcg gcctcgatgc tcctgatctc aggccccaag gccgtgctga tcaaaggggg
     2221 acatctcgct ggggaaaagg tctatgatgt attggtcagc cacacagggt cgaaggtgtt
     2281 tgaaagcccg cgcatcgaca cgcgccatac ccacggcacg ggctgcaccc tggcttcggc
     2341 tatcgccacc ggcatcgccc aggggatgga catccacgct gccgtggtcc gggcccgcaa
     2401 ttatgtcttt gaggcgattc gccatgcgcc tggcctaggt cagggacagg ggccgttgaa
     2461 tcataatccc tggagggatt gaccaggact agcccaacgc ctggatcact ttgcaaaatc
     2521 gggcttaggg ttctccctct gttcccagca aagcatgctc attcaaccaa cgctctaaca
     2581 ctacaacctc aagctccgcc actctgcgga tgcgattatc attggtga
//
LOCUS       DASQSL010000614         1300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_141955, whole genome shotgun sequence.
ACCESSION   DASQSL010000614 DASQSL010000000
VERSION     DASQSL010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141955"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(251..895)
                     /locus_tag="VE844_06320"
     CDS             complement(251..895)
                     /locus_tag="VE844_06320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00973.1"
                     /translation="MSRRTASWLAWSLAALSMVMFLASVAFFVLTRAAQAEAPSSLVP
                     SRSIIDLLVSVPFLAFPLVGALIASRRPHNPIGWICLAVGLLWMLLGLFDYYGVYGLA
                     KPDTVPFPVVIYALVEWLWLPTVGLLAIYLLLLFPDGRLPSRRWRPLAWLSGAVIVLL
                     GINSVLAPGELTDLEGVRNPFGLEGAPWVASAGIVILLLLPLCMLASASSLVLR"
BASE COUNT          344 a          389 c          386 g          181 t
ORIGIN      
        1 ggttgatcag gatgtcgacg tcgtagaggc gataacggag gacggcgaag ccaacagcga
       61 tcgggacagc tgtgaagctc actaacgccg cccgctgtag gagacctaac cactacggcg
      121 tgcttgccgc aaactaggcc actgaggagg taaacgagct aaccatggtg atcaggtaga
      181 gcaagccaac caccgaagcg gcaaaggcta tccactttat ctgttctcgc tcctcgcccc
      241 aagagcgccg ttagcgcaac accaaactcg aagccgaggc cagcatgcac aaggggagca
      301 gcaggagaat gactatccct gcactcgcca cccaaggggc tccctctagc ccgaaggggt
      361 tgcgcacccc ctcaagatca gtcaactctc cgggggcgag gacgctattg atgccgagca
      421 agacgatcac agccccagag agccaggcca gaggtcgcca cctccttgag gggagccgac
      481 cgtcggggaa cagcaggagc aggtagatgg cgagcagccc cacggtgggc agccacagcc
      541 attcgaccag cgcgtagatc accaccggga acgggactgt gtcaggcttg gcaaggccgt
      601 acacgccata gtagtcgaac aggccaagga gcatccacaa taggccgact gccaggcaga
      661 tccagcctat ggggttgtga ggacgcctgg aggcgatcag ggcacccact agggggaagg
      721 ccaagaaggg cacggaaacc aacaggtcaa tgatggagcg actcgggacc aagctgctgg
      781 gggcctccgc ctgcgcagct cgggtgagga caaagaacgc gacgctggct aagaacatga
      841 ccatagagag agcggcaagc gaccaggcaa gccaggaggc agtgcggcgg ctcatcccat
      901 tgcctccctg cccctgcagt tctcttgctc ccgctgtcac aacaccactc tacagcacta
      961 ccgtctctaa agcgttacga acaccgttgc gaggaagggc agtggcgaac ttccgagaag
     1021 cccgaacggg cgaagttcgc agaactcctc acaaacgaag gtccggaata caccttctaa
     1081 aggcaaaaag tactgcaacc ggagcagaac ggagccgaac tgagcaggaa agttgaagct
     1141 ccagaatcgc cgaaaacccc gtaaacaagc gggattcgct cacagaccag gacggcatag
     1201 gaactgtgta gacgcattcc taaaccgcga gtcggaggtt cgaatccttc caggcgcact
     1261 cagcattctt ccaatgaggt cgcaggactc gccaccgaac
//
LOCUS       DASQSL010000615         1987 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_100006, whole genome shotgun sequence.
ACCESSION   DASQSL010000615 DASQSL010000000
VERSION     DASQSL010000615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1987)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1987)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1987
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100006"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..864
                     /locus_tag="VE844_06325"
     CDS             <1..864
                     /locus_tag="VE844_06325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAzo13 family transposase"
                     /protein_id="HZC00974.1"
                     /translation="STRHLADALRRQGHVVSHHTVARLLDALDYSLQGNRKTREGRSH
                     PDRDAQFDHINQHVRAFQKRGQPVVSVDTKKKEGIGDFKNAGREWHPKGEPEKVRSKD
                     FPDKALGKGIPYGVYDLRANTGWVSVGIDHDTAQFAVETLRRWWQHMGTRVYPKAKEL
                     LVTADAGGSNGYRPRLWRVALQELADDIGLRISVCHFPPGTSKWNKIEHRMFCHITEN
                     WRGKPLVSRAVTVNLIGGTKTRTGLTITAELDVNTYPTGIKVLDEELAAVRIKKDKFH
                     GDWNYTLLPRT"
     gene            complement(840..>1987)
                     /locus_tag="VE844_06330"
     CDS             complement(840..>1987)
                     /locus_tag="VE844_06330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="ISNCY family transposase"
                     /protein_id="HZC00975.1"
                     /translation="VPTDNPIRSLLDAGDPAEVYPMFPYIFKGLQQAGVVDSYRAVSN
                     SLLLTLDRTRYFSSQKIHCPYCSSQQHANGSVTYFHSVLTPVVVKPGCDKVIPLAPEF
                     VRPQDGQAKQDCEINAAKRWLGRWGREYASLGVTVLGDDLYCHEPSRGRYWRRDLNSS
                     WCANPSPIRCCIEWVEFLERGGSVKTLVRKRWTGKRHEIDTYRYVGAVPLRDGDDALL
                     VNWCELTTTTPDGQVVYHNAFATSHAMEQANVVEVVAAGRSRWKIENENNNTLKTKGY
                     HFEHNYGHGQQFLSSLLATLILLAYGLHTLLEWMDDKYPLLRQKLPSRQRLFNDIRAL
                     TTYLCFDSWDALLVFMLSDFSHPPRICRKITFPILRPIRLYVLGNRV"
BASE COUNT          463 a          543 c          569 g          412 t
ORIGIN      
        1 agtacccgtc atctggccga tgcgctcagg cgccaggggc acgtggttag tcaccacact
       61 gttgcccgat tgcttgatgc gctggactac agcctacaag gcaatcggaa gacgcgtgaa
      121 ggccgttctc atccggatcg cgatgcccaa tttgaccaca tcaatcaaca cgtgcgggcg
      181 tttcagaaac gcggtcaacc ggtggtctcg gttgacacta aaaagaagga agggattggc
      241 gatttcaaga atgccgggcg ggaatggcat cccaagggcg agccggagaa ggtgcgcagc
      301 aaggattttc ctgacaaagc gcttggcaaa ggcattccgt atggtgtcta tgacctccgt
      361 gccaacacgg gctgggtgag tgtgggaatc gaccatgata cggcccagtt tgctgtcgaa
      421 acgctacgtc gctggtggca acacatgggc actcgggttt atcccaaggc taaagagttg
      481 ctcgtgacag cggatgcggg cggcagtaac ggctatcgcc cccgattgtg gagggtagcc
      541 ttacaagagt tggctgacga catcggatta cgcatctccg tgtgccactt tccaccgggc
      601 accagcaaat ggaataagat cgagcatcgc atgttctgtc atatcaccga gaactggcgt
      661 ggcaaaccac tcgtgagtcg ggcggtcact gttaatctca tcggcggtac caaaacacgg
      721 actggtctga cgatcacggc cgagctggat gtgaatacat acccaacagg gatcaaagtc
      781 ttagatgagg aactcgccgc tgtccggatc aaaaaagata aattccatgg tgactggaac
      841 tacaccctat tgccaagaac atagagcctt ataggacgta aaatcggaaa agttattttg
      901 cgacagatgc gaggagggtg cgagaagtcg ctcagcatga aaacgagcag cgcgtcccaa
      961 ctgtcgaagc ataaataggt ggtcagtgcg cggatgtcgt tgaacaggcg ctgtcgtgaa
     1021 ggcagcttct ggcggagcaa cgggtacttg tcatccatcc actccagcag tgtatgtagc
     1081 ccataggcga gcaggatgag ggtggctaac aaagacgaga ggaactgttg gccgtgaccg
     1141 tagttatgct cgaagtgata gcctttggtt ttcagggtgt tgttgttctc gttttcaatc
     1201 ttccaccggc tgcgcccggc ggcaaccacc tccacgacgt tagcctgctc catcgcatgc
     1261 gaggtggcaa acgcattgtg gtacactacc tgaccgtccg gggtagtggt tgtgagctca
     1321 caccaattca ccagcaaggc gtcgtctccg tcccgcaacg gcactgcacc gacataccga
     1381 taggtgtcga tctcatggcg cttgccagtc caccgtttac ggaccagggt tttaacgctg
     1441 ccgcctcgct ccaaaaactc gacccactca atacagcagc ggatgggact ggggtttgca
     1501 caccaggatg aattcaaatc cctgcgccaa tatctccctc tcgagggttc atggcagtac
     1561 aggtcatcgc cgagcacggt tacgcccaag gaagcgtact ccctccccca gcgtcccagc
     1621 caccgcttgg ctgcgttaat ttcacagtct tgcttcgcct ggccatcctg gggccgcacg
     1681 aattccgggg ccagcgggat cactttgtca caacccggct tgaccacgac cggcgtcagc
     1741 accgaatgga aatacgtcac cgagccgttg gcgtgttgct ggctcgagca gtacgggcaa
     1801 tgaatcttct gcgaggaaaa gtagcgggtc ctgtccagcg tgagcaacag gctgttgctc
     1861 accgctcggt aggaatctac taccccggcc tgctgcaagc ccttgaatat atagggaaac
     1921 atcggataca cctcggcggg gtctcccgca tcaagtaatg agcggatggg attatccgtc
     1981 gggacct
//
LOCUS       DASQSL010000616         1155 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_18961, whole genome shotgun sequence.
ACCESSION   DASQSL010000616 DASQSL010000000
VERSION     DASQSL010000616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18961"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1155)
                     /locus_tag="VE844_06335"
     CDS             complement(<1..>1155)
                     /locus_tag="VE844_06335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00976.1"
                     /translation="EVHAIIDKVAKPTSAEDRDRLHAACLGNPLILTYLLNTFKRSPG
                     TSVNDVLAEPASYAGDIDKYYAAALSVPLQDFQTRALLALLCRAVPTIPIRWLQSWPE
                     RATLEDLYQHTLAPFVRVEDENLYFIHNSLIAFLKSETRSKLPGADHAADERAYHATL
                     ADRSRGLPCANPLGRAHVLHLLRAGRGPELLTVLTSSWLREALDAFLPYALLRPLLLA
                     GLEAAWTLCEYGHVVRFVLLEHELGQRTARMEAGELADRLLRLDLPDVALSQVRSGGR
                     LLVDDKVALGFAQSLWYYADSKGSQAFKTAARTLYSQVKPIAFVYHGEPIDISRHHDY
                     YSVLRAWSEVAPFFETTQEIVKQVNDLKFTSGEPREEVSHASVKCGLLYG"
BASE COUNT          242 a          325 c          352 g          236 t
ORIGIN      
        1 ccccgtacag gagcccgcac ttgacggatg cgtgactcac ctcttctctg ggctcaccgc
       61 ttgtaaactt aaggtcattc acttgtttga caatctcctg cgtggtttca aagaacggcg
      121 cgacctcact ccacgcacgg agcactgagt aataatcgtg atgccgactg atatctatag
      181 gctccccgtg gtacacaaag gcgatcggtt tcacctgtga atagagggtt cgtgccgcgg
      241 tcttgaaggc ttgagaaccc ttgctgtcgg cgtaatacca caggctctgg gcaaaaccta
      301 gggcgacctt gtcgtctaca aggagcctgc cgccgctacg cacctgggat agggcgacgt
      361 ctggcaggtc gagacgcagc aagcgatcgg ccagctctcc cgcttccatg cgggctgttc
      421 tttgaccgag ttcgtgttcc aagagcacga atcgaaccac atgcccgtac tcgcatagcg
      481 tccaggcggc ctctagtccc gcgagcagca aagggcgtag gagcgcatag ggcagaaaag
      541 catcgagtgc ttctcgaagc cacgatgaag tcagaacagt cagtagctca ggcccgcgtc
      601 ccgcacgaag caggtggaga acgtgggctc ggccgagcgg attcgcgcac ggcaagcccc
      661 tcgaacgatc cgctaaggtt gcgtggtacg cccgttcatc tgcggcgtgg tctgcccctg
      721 gcagctttga gcgggtctcg gacttcagga acgcgatgag gctgttatga ataaagtaaa
      781 ggttttcatc ctccacgcgc acgaatggcg caagggtgtg ctggtataag tcctcgagag
      841 ttgcgcgctc tggccacgac tggagccagc gaatcgggat cgtcgggact gctcgacaga
      901 ggagtgccaa gagcgccctg gtctggaagt cctggagagg aacggagaga gctgccgcat
      961 aatacttgtc aatgtcgccg gcgtagcttg caggttctgc aagcacatca ttcacgctgg
     1021 tgcccggaga tcgcttgaag gtgttcagga ggtacgtcag gatcagagga ttgcctaggc
     1081 acgccgcatg gagccgatcc cgatcctcgg ccgatgttgg cttggccact ttgtcgatga
     1141 tcgcgtgcac ttcag
//
LOCUS       DASQSL010000617         3585 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_5091, whole genome shotgun sequence.
ACCESSION   DASQSL010000617 DASQSL010000000
VERSION     DASQSL010000617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3585)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3585)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3585
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5091"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(387..1364)
                     /locus_tag="VE844_06340"
     CDS             complement(387..1364)
                     /locus_tag="VE844_06340"
                     /EC_number="1.3.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018233085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HZC00977.1"
                     /translation="MSIEAHDQKMLAIEFCGLQFNTPLVLLSGCVGFGEEYTRVVGFS
                     NRDAGAICLKGTTLEPRLGNLPHRIAETPAGMLNAIGLQNPGARAVVDRILPKLDFTE
                     TRFIANVSGSTVEEYREVTRIFDDSPIDAIEINISCPNVKEGGVAFGNDPEMSARVVE
                     VCRAVTHKPIITKLSPNQTDIAKNARRCIEAGTDALAVINTVMGMAIDIGSRRPIIGN
                     NQGGLSGPAIKPIALLKVQQVYQQIAKPHGIPIIGQGGIVSTGDALEFLIAGASAVGI
                     GTALFYDPLVCPKINAGIVEYLKRHGFNHVSELVGTLELNTPSSGICTG"
     gene            1367..1831
                     /gene="trmL"
                     /locus_tag="VE844_06345"
     CDS             1367..1831
                     /gene="trmL"
                     /locus_tag="VE844_06345"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020485736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008175 - tRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HZC00978.1"
                     /translation="MFHVVLYQPEIPQNTGNIIRLCANTGAYLHLIHPLGFALEDKYV
                     RRAGLDYHEWVSVMQYRTFDDFKAQVQPPRLFALSTKGRRHYTEIVYQAEDTFLFGPE
                     TRGLPAALLNRLGTDQVLRIPMRPHNRSLNLSNAVAIVVYEAWRQLGFIDAR"
     gene            complement(1851..2864)
                     /locus_tag="VE844_06350"
     CDS             complement(1851..2864)
                     /locus_tag="VE844_06350"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012972195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HZC00979.1"
                     /translation="MRSHLPPILVAGAGSWGTALAILLARNGQRTYLWGRNPAHIADL
                     ERDYQNRRYLPGVVFPQNLWPVSDLDQALQSTHDLILAVPCAGLREVLALLSQTSSAR
                     QWRIAWACKGFEPGTHKLIHEVIEEMLGRRQPMAAISGPNFAHEVAAGLPAAVTVASP
                     DAEFARDLVTRLHRGAFRAYTSDDIIGVEVGGAVKNVLAIAAGVADGLEFGANTRAAL
                     ITRGLVEMIRIGTALNGRRETFMGLAGLGDLVLTCTDDRSRNRRLGLALAKGQTVEQA
                     TASIGQVVEGIRTAYEVDFLACKQGIEMPITEQVARLLKGECQPREAVQALLAREPKQ
                     ELG"
     gene            complement(2875..3375)
                     /gene="secB"
                     /locus_tag="VE844_06355"
     CDS             complement(2875..3375)
                     /gene="secB"
                     /locus_tag="VE844_06355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013816993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0051262 - protein tetramerization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HZC00980.1"
                     /translation="MTDKKEALGPEKTAQAKVAGQLAIQKIYAKDISFEAPNSPQVFL
                     GEWKPQVDVQLANHTTSLGNDVHEVVLTVTITVQSESKTSYLVEVQQAGIFSITGFPP
                     QHLAAVLATLCPNILFPYAREAVSDLVTRGGFPQLLLAPVNFDTLYAQELQHQQKAAA
                     QKELIH"
     gene            complement(3399..>3585)
                     /locus_tag="VE844_06360"
     CDS             complement(3399..>3585)
                     /locus_tag="VE844_06360"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HZC00981.1"
                     /translation="LSQRMKELDKFRDRPIILCCQMGDTSSGAGIALMKAGITKLYRL
                     RGGILAWQNLNLPLTKG"
BASE COUNT          775 a         1065 c          960 g          785 t
ORIGIN      
        1 cggcttctcc tgtaggggta aagaatgcta ccgctatgag ctgattttag catgtagtga
       61 ttgaactttc agaacaggac ctggcggact ttgtgcaaag agcaggggtg tggctgttgt
      121 ttttcaaacg gctactggct atatttttat ccaacatctg atttatcgag atcaactttg
      181 actgcgacgg taacccagca taatgtatga tgaccccgac ataccgggcg tgcgcctgcc
      241 gttatttggg ctctttggga attgccgtga aaacgagacc gggttcaaca cccctcccaa
      301 tattttcaac ggcttagcgg gacaagcaag aggttttgca gccgattcca cggcaattcc
      361 caaagagcca taaaaactac cccttctcac ccggtacata tcccagaact cggtgtatta
      421 agctccaagg taccgaccag ctcggagaca tggttgaatc catgccgttt cagatactcg
      481 acgatccccg cgttgatctt cgggcagact aaggggtcat aaaacagcgc cgtacctatc
      541 ccgacagcgc tggcgccggc gatcagaaat tccagcgcat cgccggtgct gacgatgccc
      601 ccctggccga tgatggggat cccatggggt ttggcgatct gctgatacac ctgctgcacc
      661 ttgagcagcg caatcggctt gatcgcaggc ccggagagac cgccctggtt attaccgatg
      721 atgggccggc gggatccaat atcgatcgcc atccccatca cggtattgat gacggccagg
      781 gcatcagtgc ccgcctcgat acagcggcgg gcattcttgg caatatccgt ctggtttgga
      841 gagagcttgg tgatgatcgg tttatgggta accgcccggc atacctcgac cacccgcgcc
      901 gacatctcgg gatcgttacc aaaggcgaca ccgccctcct tgacgttggg acaggagata
      961 ttgatctcga tggcatcaat gggcgagtcg tcgaagatcc gcgtgacctc tcggtattcc
     1021 tccaccgtgg accccgagac attagcgatg aaccgggtct cggtaaaatc gagcttaggc
     1081 aggatcctat cgactacagc ccgggcgccg ggattttgca ggccgatggc gttgagcata
     1141 ccggccgggg tctcggcgat ccggtgcggt agattgccaa gcctcggttc tagcgtcgtg
     1201 cctttgaggc aaattgcgcc tgcgtcgcgg ttggaaaaac ctaccacccg ggtatattct
     1261 tctccgaaac ccacacatcc agataacaat acgagcggtg tattgaattg cagaccgcag
     1321 aactcgatgg ccagcatttt ttgatcatgg gcctctatag acattgatgt tccatgtagt
     1381 cttgtatcag ccggagatcc cccaaaacac cggcaatatt atacgcctgt gcgccaatac
     1441 cggcgcctat ctgcacctta tccatccgct cgggtttgcg ctcgaggata aatacgtgcg
     1501 ccgcgccggg ctcgattatc acgagtgggt gagcgtcatg cagtaccgaa cgttcgacga
     1561 tttcaaggcc caggtgcaac cgccccgatt gtttgctcta tccaccaaag gacggcggca
     1621 ctataccgag attgtttacc aagccgaaga caccttcctg tttggaccag agacccgcgg
     1681 cttgccggca gcgttgctca atcgactcgg aacggaccag gtactgcgta ttcctatgcg
     1741 cccccataac cgcagcctca atctctccaa tgccgtggcc atcgtcgtct acgaggcttg
     1801 gcggcaattg ggtttcatag acgcccgatg acccccgatt aagccgttca tcaaccaagc
     1861 tcctgcttag gctctcgcgc aagcagggcc tgcaccgcct cccggggttg gcattcacct
     1921 ttgagcaggc gtgccacctg ctcggtaatg ggcatctcaa tcccttgttt acacgccagg
     1981 aaatcgacct cgtaagccgt gcggatcccc tcgaccacct gaccgataga ggcggtcgcc
     2041 tgctcaaccg tctgaccttt ggccaaggcc agtcccagac gccgattgcg ggatcggtca
     2101 tcggtgcacg tgagcaccag atcgcccaag cccgctaaac ccatgaaggt ctcgcgccgc
     2161 ccatttaggg ctgtaccgat gcggatcatc tccaccaaac cccgggtgat caacgccgcc
     2221 cgtgtgttag cgccgaattc gagcccatcg gccacacccg cagcgatcgc caatacgttc
     2281 ttgaccgcac cccctacctc gacaccgatg atgtcatcac tggtataggc ccgaaaagct
     2341 ccccggtgca gtcgggtcac gagatcacgg gcaaattctg catccggcga ggccacggtc
     2401 acggcggccg gcagaccggc agccacttca tgcgcgaaat tcggtcccga gatcgccgcc
     2461 atcggctgcc tcctccccag catttcctca atcacttcgt ggatcagctt atgggtgccg
     2521 ggctcaaagc ctttgcaggc ccaggcgata cgccattgcc tggccgacga ggtctggctc
     2581 aataacgcta ggacctcccg caagcccgca caggggacag cgaggatgag atcgtgggtg
     2641 ctttgtaagg cttgatccaa atcagacacc ggccaaaggt tttgagggaa taccaccccc
     2701 ggaagataac gccggttttg ataatcgcgc tcgagatcgg caatatgggc cggattgcgt
     2761 ccccacagat aggtccgctg gccattacgc gctaacaaga tggcgagcgc cgtcccccaa
     2821 gatcctgcac ctgccaccag gatggggggt aagtgtgatc tcatgaacta ggtatcaatg
     2881 gatgagctcc ttctgcgccg cagccttctg ctggtgctgc aattcctggg catagagggt
     2941 atcgaaattg accggcgcca gtaagagttg cggaaagccg ccgcgggtaa ccagatccga
     3001 caccgcctct cgggcataag gaaagaggat gttggggcat agggtggcga gcacagcggc
     3061 gaggtgctga ggcggaaagc cggtaatact aaagataccc gcctgctgga cctctaccag
     3121 ataactggtc ttactctcgg attgcaccgt gatggtgacc gtcaacacga cctcgtgcac
     3181 atcgttccct agcgaggtgg tatgattggc cagttgcaca tccacttgcg gcttccattc
     3241 tcccaaaaat acctgcggtg aattcggcgc ctcaaacgat atatctttgg catagatctt
     3301 ttggatcgca agctggcccg ctaccttagc ttgcgccgtt ttctcaggtc ctagagcttc
     3361 tttcttgtca gtcatcggtt tatcctaatt taaggctatt atcccttggt caatggaaga
     3421 ttcaggttct gccacgccag gatcccgcct cttaggcgat agagtttagt gataccggcc
     3481 ttcatcaaag cgatcccagc cccgctcgag gtgtctccca tctggcagca caggatgatc
     3541 ggccggtccc gaaatttatc taactccttc atgcgttgcg ataac
//
LOCUS       DASQSL010000618         1403 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_155837, whole genome shotgun sequence.
ACCESSION   DASQSL010000618 DASQSL010000000
VERSION     DASQSL010000618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1403
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155837"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..372
                     /locus_tag="VE844_06365"
     CDS             <1..372
                     /locus_tag="VE844_06365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012606384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3 family transposase"
                     /protein_id="HZC00982.1"
                     /translation="KAIKTAFLARYLHEEALRREIHEGLNVVENWNSTNGFIFYGKSG
                     EIATNRLDDQELSVLSLHLLQACLVYINTLMLQDILADPAWMGGMTAEDFRALSPLVY
                     THVNPYGTFALDMDARLPIAA"
     gene            472..1080
                     /locus_tag="VE844_06370"
     CDS             472..1080
                     /locus_tag="VE844_06370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015205632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HZC00983.1"
                     /translation="MTATSQTSFSVKTSPKKPTNAERRSREYLTPHEVDQVIAAARKV
                     GRHSSRDATLILLMYRHGLRVAEAVSLRWDAVNLRAGLLHVHRIKHGQPAVHPLRGPE
                     LRALRQLRRDYPDTPYLFISERGGPLTARAVHHSVLRAGEIAGLKFPIHPHMFRHACG
                     FYLANKGIDTRAIQQYLGHCNIQHTVRYTALTPHRFTQFWDD"
     gene            1161..>1403
                     /locus_tag="VE844_06375"
     CDS             1161..>1403
                     /locus_tag="VE844_06375"
                     /inference="COORDINATES: protein motif:HMM:NF028174.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase dimerization domain-containing
                     protein"
                     /protein_id="HZC00984.1"
                     /translation="MADATPEPETIEKLGNAAFFSIAMVAGMQLELFTPLGSGPMTAE
                     QLAEALGVGVTRLTPLLYALVAADLLTVEDGRFANTP"
BASE COUNT          315 a          395 c          377 g          316 t
ORIGIN      
        1 aaagcgatca agaccgcgtt tctggcgcgc tatctccacg aggaggccct cagacgagag
       61 attcacgaag ggctcaacgt cgtggagaac tggaacagca ccaatgggtt catcttctat
      121 ggcaagagcg gtgagattgc gacgaatcgg cttgatgacc aagagttgtc ggtgctctcc
      181 ctccatctgc tgcaagcctg tttggtgtac atcaacaccc tcatgcttca ggatattctg
      241 gccgaccccg cgtggatggg aggcatgaca gcagaagatt ttcgagccct ctcccccttg
      301 gtgtatacac acgtcaatcc ttacggcacc tttgcattgg atatggacgc acggctgccg
      361 attgcggctt gagggcaggt gccgtttcac gtatgctgac ttgaccgaaa acacctgact
      421 tcggtcgaac tcagcatacg acctctagag attatgcggg agagcggcga gatgacggca
      481 acctcccaaa catcattttc ggtcaagaca tcacccaaga agccgaccaa tgctgaacgg
      541 cgctcacggg aatatctgac cccacatgaa gtcgaccaag tcattgctgc tgcccgcaaa
      601 gtcggccgtc attctagccg tgatgcgact ctcattctct taatgtaccg ccatggtttg
      661 cgggtggccg aagcggtgtc gctgcgttgg gacgccgtca atctccgggc aggtcttctg
      721 catgtccacc ggatcaaaca tggacaacct gctgtccatc ccttacgcgg tcctgaactt
      781 cgagctttac ggcagttacg ccgagactat ccggatacac cctatctctt tatctctgaa
      841 cggggtgggc cactgaccgc acgagcggta caccatagtg tgctgcgggc gggagagatt
      901 gcaggcctga agtttccaat tcatcctcat atgttccggc atgcctgcgg attttacctt
      961 gccaataaag gcatcgatac ccgcgcgatc cagcagtacc tgggacactg caatattcaa
     1021 cacaccgtgc gttacacggc cttgacccct caccggttta cccagttttg ggatgattga
     1081 ggccacggta tcgtgtgcga cgcgtcgctc ataggcatcc gttccgtgtc aaccagtcac
     1141 ctgtcgaaga ggagtggacg atggcagacg ctacccccga acccgagacg attgaaaaac
     1201 ttgggaatgc ggcgtttttt agcatcgcca tggtggcggg gatgcaacta gaactgttta
     1261 cgccactagg gtcagggcca atgactgctg aacaattggc agaggctttg ggcgtgggag
     1321 tcacaagact tacccctctc ctatacgctc tagttgcagc agacttactg acggttgaag
     1381 atggacggtt tgctaacacc ccg
//
LOCUS       DASQSL010000619         1880 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_73405, whole genome shotgun sequence.
ACCESSION   DASQSL010000619 DASQSL010000000
VERSION     DASQSL010000619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1880)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1880)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1880
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73405"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            323..1836
                     /locus_tag="VE844_06380"
     rRNA            323..1836
                     /locus_tag="VE844_06380"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          463 a          453 c          603 g          361 t
ORIGIN      
        1 tgatggctga cggcgcttca agatagtcca agactgtctg gtattctaag gggacacact
       61 aaatcggatt actgattcct gcacaaaaaa ctaaaggcaa tagattgaaa acaaatgttc
      121 tttatcctat aataatttaa agagcgtcca gccaagctat cgggctggag tcttggactg
      181 ggaggcggtg gagaagacgg aagaaatttg aaataccgat aaaccccctt gacagggttt
      241 tctggtctca gtgtacttaa cttagcacgc tcaaatcagg gcgtgggtga gcactttaac
      301 agttgaatag tggaaggaat atattttaga gagtttgatc ctggctcagg gtgaacgctg
      361 gcggcgcgcc taatgcatgc aagtcgagcg tgccctggtg gcttcggcca tcagggaaag
      421 cggcagacgg ctgagtaacg cgtgagtaac ctaccctctg gtggggtata gccgcgagaa
      481 atcgcggtta atcccgcata agatctccag gccttggttt ggagatgaaa gccttcgggc
      541 gccggaggag gggctcgcgt cctatcaggt agttggtgag gtaacggccc accaagccga
      601 tgacgggtag ctggtcttag aggacgacca gccagagggg gactgagaca cggcccccac
      661 tcctacggga ggcagcagca gggaatcttg ggcaatgggc gaaagcctga cccagcgacg
      721 tcgcgtggag gaagaaggcc ttcgggctgt aaactccttt tccaagggaa gagtaaggac
      781 ggtaccttgg gaataagctc cggctaacta cgtgccagca gccgcggtaa tacgtaggga
      841 gcgagcgtta cccggaatca ctgggcgtaa agagcgcgta ggcggctggg taagtctctt
      901 gtgaaagctc ccggcttaac tgggagaggt caagggatac tacctggcta gagggcagta
      961 gaggaaagcg gaattcccgg tgtagcggtg aaatgcgtag atatcgggag gaacaccagt
     1021 ggcgaaagcg gctttctggg ctgtacctga cgctgaggcg cgagagcgtg gggagcaaac
     1081 tggattagat acccaggtag tccacgccct aaacgatgga tgctaggtat agggggtatc
     1141 gacccctcct gtgccgcagc taacgcgata agcatcccgc ctggggacta cggccgcaag
     1201 gctaaaactc aaaggaattg acgggggccc gcacaagcgg tggagcgtgt ggtttaattc
     1261 gatgctaagc gaagaacctt accagggctt gacatgcttg tagtagaaac ccgaaagggc
     1321 aacgatcccg gggtaactcg ggaagcttgc acaggtgctg catggctgtc gtcagctcgt
     1381 gccgtgaggt gttgggttaa gtcccgcaac gagcgcaacc cttgtcgcta gttacactct
     1441 ctagcgagac agcctcccac aaggaggagg aaggtgggga tgacgtcaag tcatcatggc
     1501 ccttatgtcc tgggccacac acacgctaca atggccggta caatgggtcg ccaaagcgtg
     1561 agctggagcc aatcccagca aagccggcct cagttgggat tgcaggctgc aacccgcctg
     1621 catgaacgcg gaatcgctag taaccgcagg tcagcattac tgcggtgaat acgttcccgg
     1681 gccttgtaca caccgcccgt cacgtcatga aagctggcaa cacccgaagc cggtgggcca
     1741 accgcaagga ggcagccgtc gaaggtggga ctggcgattg ggacgaagtc gtaacaaggt
     1801 agccgtaccg gaaggtgcgg ctggatcacc tcctttctaa ggagcagttg gcagccgtgg
     1861 gctgcgcgga tggtgggtgg
//
LOCUS       DASQSL010000620         1099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_5125, whole genome shotgun sequence.
ACCESSION   DASQSL010000620 DASQSL010000000
VERSION     DASQSL010000620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5125"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(441..857)
                     /locus_tag="VE844_06385"
     CDS             complement(441..857)
                     /locus_tag="VE844_06385"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HZC00985.1"
                     /translation="MSAEENKDLARRSWESLSERNPDLIEEFYPPDLVWHAPDQDIRG
                     YEEARQYVSTFFDAFPDINITLEDVIAEGDQAVTRYTIRGTHRGETEEFGPPTGRQME
                     VEGITIHRIEGGKIVEEWERYDNLSVMQQLGLVPEQ"
BASE COUNT          227 a          313 c          304 g          255 t
ORIGIN      
        1 ctgccggatc tcgtcctctg ctgccatagc tggcctactc tttccccgcc ttctctaagg
       61 cggatcgctc gcttacactc caactctatc ccggcctcta ggaaaaagga agacccgcta
      121 caagcgatcg gttgaaaaac cctgggtcga gggcgggttt ccgagaagag gtcaaagaga
      181 ctgtctggaa aatagctaga gggcacttga gtgtccgtgt ttggtggcac ccaaggcggc
      241 aaaacaggga ttctggctcc gtttcaacca ctcgtgggag cccagagtag tacctatccg
      301 gaatttccag acagtttcag agcatcagtt cccggaaact aggcttccag cattggggat
      361 tcccggaacc cctatgggca taaaaagagg gccggggctg ctaagcgccc cggcccgaca
      421 agtagctaac tgtcggcctg ctactgttcg ggaacgagcc cgagttgctg catgacgctc
      481 agattatcgt agcgttccca ctcctcgact atcttgccgc cttcaatacg gtgtatggtg
      541 atgccttcaa cctccatctg cctccccgtg ggaggaccaa actcctctgt ctctcctcgg
      601 tgggtgccgc gtatggtgta gcgggtgacg gcctggtcac cctcggctat cacatcctcg
      661 agagtgatgt tgatgtcggg gaaggcgtcg aagaacgtag agacatactg cctagcttcc
      721 tcgtagcctc ggatgtcttg atcaggtgcg tgccagacca aatcgggagg gtagaactct
      781 tctatgaggt ctgggttccg ctcgctcagg ctctcccagg aacgccgcgc taggtccttg
      841 ttctcttctg ccgacatcgg cctcctcctt tctcccgcgc tccccggcgg gttagttaac
      901 actttgatta atggccgcaa ataacgaaga tgtcaagggt tggagcggga ttgcctctat
      961 tcactgagct gccgagaagg gggattctcg gaaacccaat ctgtgccacc actcattctt
     1021 gatctatatg taggggaaat cgtatgcgca gcggaccggt actatgccga gtgcacgaac
     1081 aactttccgg tgtacggag
//
LOCUS       DASQSL010000621         1040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_182290, whole genome shotgun sequence.
ACCESSION   DASQSL010000621 DASQSL010000000
VERSION     DASQSL010000621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182290"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            171..>1040
                     /locus_tag="VE844_06390"
     CDS             171..>1040
                     /locus_tag="VE844_06390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019864682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HupE/UreJ family protein"
                     /protein_id="HZC00986.1"
                     /translation="MHLILFILLVIQRSIICLGLILVSSASLAHKPSDSYLTLVIDEA
                     TIKGQWDIALRDLDYAIGLDMNGDGAITWGELRARHPAIAAYALAHLQIASGDRTCLL
                     QAREHLVDHHTDGAYAVLRFTAACPREMRNLTVDYRLLFDLDPQHRGLLNISHQGQTH
                     TAIFSPDHSVQPIELATLTAWREFLTYGREGVWHIWIGYDHILFLLSLLLPAVLKREA
                     HRWQAVTGFRPALVEVVKVVTAFTVAHSITLSLAVFGIFTLPSRWVESAIATSVILAA
                     LNNLYPILSERRWM"
BASE COUNT          195 a          324 c          268 g          253 t
ORIGIN      
        1 ggaacctccg cgatgcgttt ccgttcgtag cgcggacgca ccagccgttc acacccggta
       61 ccgtggacga tcgcactcgc aattaatagc ggttcaaggt ggctgcctct gacggtgatt
      121 gcacctcttc agaggcagcc caacctgctt tagactaagt ggtgcggcct gtgcacctta
      181 ttctgttcat cttgctagtg atacagcgct ctatcatctg tcttggcttg atcctagtct
      241 cttccgccag cctcgcacat aagcccagcg acagttacct tacgctcgtt attgatgagg
      301 ccactatcaa aggccaatgg gatatcgcgc tgcgcgatct cgattatgcc attgggctcg
      361 atatgaacgg cgatggtgcc atcacctggg gcgaattgcg cgctcgccat ccggcgatag
      421 ccgcttatgc cctcgcccat ttgcaaatag ctagcggtga tcggacatgt ttgctgcaag
      481 cccgggagca cctggtcgac caccataccg acggcgccta tgctgtgctc agatttaccg
      541 cagcctgccc aagagaaatg cgaaatctga ccgtagatta ccgcctattg tttgatctgg
      601 atccgcaaca ccggggactg ctcaatatta gccaccaggg ccaaacccac accgctattt
      661 tcagtcctga ccacagcgtc cagcctatcg aactcgctac actcactgcc tggcgagagt
      721 tccttaccta tggacgggag ggcgtctggc acatttggat cggctatgac catatcctgt
      781 ttttgctgag tctcttgctg cccgcggtcc tcaagcgtga ggcccatcga tggcaggccg
      841 tcaccggttt ccgcccggcg ctcgttgagg tcgtcaaggt cgtcaccgct tttaccgtgg
      901 cccattcgat caccttgagc ctcgcggttt ttggtatttt caccctgcct tcgcgctggg
      961 tggaatcggc gatcgcgacc tccgtcatcc tcgcggcact gaacaatctc tacccgattc
     1021 tatccgagcg gcgctggatg
//
LOCUS       DASQSL010000622         1306 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_100061, whole genome shotgun sequence.
ACCESSION   DASQSL010000622 DASQSL010000000
VERSION     DASQSL010000622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100061"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(249..671)
                     /locus_tag="VE844_06395"
     CDS             complement(249..671)
                     /locus_tag="VE844_06395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013964926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper family protein"
                     /protein_id="HZC00987.1"
                     /translation="MKSGVKLIAFICIAGIAGCSAARPVLYPNEHLRAIGPEMARRDI
                     AECQSLAEAAGSSPNQSKGGEVARNTIGGGALGAATGAVGGAVVGSAGSGSAIGAASG
                     AAAGLLRGLFSRSEPNQVYVAFVNQCLQERGYKVIGWE"
BASE COUNT          307 a          405 c          334 g          260 t
ORIGIN      
        1 agcatgtggc ttacgtgcaa aagcacaacg agctggtcga ggcacttgcg caaaccgaac
       61 aactcttcat cgccctgtat taacacacac cgagacctta tgccgcattc aggcaatcat
      121 gcctgcctga aaggagcgga agacgatggc gagagtcact ctgaattaac acgcgcctaa
      181 gcagactgcg gcatacagac gacagacagt ggctaaaaca cccttgtgga ggagtatgag
      241 tgcggacatt actcccagcc gatcacctta tacccacgct cttgcaagca ctggttcacg
      301 aacgcaacat acacctggtt gggctccgat cggctgaaga gcccacgcaa gagccctgcg
      361 gctgcgccgc tggcggcacc aatggccgag ccactccctg ccgagcccac cacagcccca
      421 ccgaccgctc cggttgccgc accgagggct ccacctccga tcgtatttct ggcaacttca
      481 ccacccttac tctggttcgg gcttgatccg gccgcctccg ccaaggactg gcactcagcg
      541 atatcccgcc tggccatctc cggcccgatg gctcgcaaat gctcgtttgg gtagagtaca
      601 ggcctggcag cggagcagcc tgctatgccg gctatacaaa taaacgcaat cagcttcact
      661 ccactcttca tccatatgtc tccttgtagt ctgcctttga atccagcact gcttattggg
      721 gaaatgttgg gaaccctcat ctaatcaata accttcctct ttcttctgac gtctacatcc
      781 gcgccagccc acgtgtgata ctggtttcag ctatccgcta aaatcgactc ccgcaccgca
      841 ttcaaccgta agagccgcat tccaccgtgt ggcctgtagc cagcgtacta gccaaggcca
      901 ggagcagagt ctcaaacgga caccagcgct ctctgatctc ggcattacca aggtcaatcc
      961 tcccgctggc agaagcttgc gcaggttcca gagaagaact ttgagcgccg tcttgaggag
     1021 gcacggcgcg agcaatcgcc agcgtgctgc ctatccatcc gcgaatcgaa agctgctttt
     1081 ttcaatgtta acatatccgc cgtaaacata ccgaggggaa tgctatgccg gacaggaaag
     1141 cgtatatgcg cagctacatg cgccagaggc gcgctgaggc tacagccagt gccacagggc
     1201 aggctgagga gcggctaagg gaaataatgc gccaggagat ggaggcaatc tccaagccga
     1261 ggtacgaggc gctggaggca cttattcaat ccctggtggt tatgtt
//
LOCUS       DASQSL010000623         6503 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_100082, whole genome shotgun sequence.
ACCESSION   DASQSL010000623 DASQSL010000000
VERSION     DASQSL010000623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 6503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6503
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100082"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(29..1678)
                     /gene="aepX"
                     /locus_tag="VE844_06400"
     CDS             complement(29..1678)
                     /gene="aepX"
                     /locus_tag="VE844_06400"
                     /EC_number="5.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020202800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050188 - phosphoenolpyruvate mutase
                     activity [Evidence IEA];
                     GO_process: GO:0019634 - organic phosphonate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate mutase"
                     /protein_id="HZC00988.1"
                     /translation="MNKPEVIRRSKCARLHELIASPQLDFLMEAHNGISARIVEEAGF
                     KGIWASGLALSAQYGVRDNNEASWTQVVEMLEFMSDITQIPILLDGDTGYGNFNNLRR
                     LVKKLEQRGIAGVCIEDKRFPKTNSFIASERQPLADIDEFCGKIKAGKDSQSDPDFCI
                     VARVEALIAGWDLSEALRRAESYHAAGADAILIHSKLSRPDQIVAFANEWAGRAPLVI
                     VPTKYYSTPVEVYRKAGINLVIWANHMIRTAVAGMQSVAQAIHDNESPVHMEDHIATV
                     DEIFRLQGAEELQEAEKRYIAPNQPAPQAVVLAASRGQELDRLTHTRPKVMVPIGGKP
                     LLRRLVDEFKKQGINTITVVAGYKPEAIDVLGIRLLLNPAYEHTGQLASLNCARAGFG
                     EDMVVLYGDLLFRSYILRDLLDRREEIVVVVDSTATPPASGRPDYAYCSSPDDRLWLN
                     RDVDLLQISPEARLGSKAPSGRWIGMLRARGRGSQWLSEALDRLREPGDFKHLNLPDL
                     LNHLIAQGKPVKVLYIHGHWLDVNSLDDLDRAGDFAQGQSK"
     gene            complement(1671..2408)
                     /locus_tag="VE844_06405"
     CDS             complement(1671..2408)
                     /locus_tag="VE844_06405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016872846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocholine cytidylyltransferase family
                     protein"
                     /protein_id="HZC00989.1"
                     /translation="MKALILAAGRGQRLGKESNDRPKCLLRFKGRSLLERHLHCLRQL
                     GIEEVVIAVGYQAQCIHEELKARGISASTVYNPDYTQGSIVSLWALREHMVEEDLLLM
                     DADVLYDRRMLKRLITTPFPNCFLLDRVFEAGDEPVKLCVRADQLVEFRKHLSHELVY
                     DFCGESVGSFRFSKAMAARLAERACYYLEHGWRDQPYEEAIRDLLRATPHEFGFEDIT
                     GLPWIEIDFPEDIRRAEHEILPKLLDE"
     gene            complement(2416..2712)
                     /locus_tag="VE844_06410"
     CDS             complement(2416..2712)
                     /locus_tag="VE844_06410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00990.1"
                     /translation="MGLADQSSCRLEYQLYRDDGDHKPETHALALTPGTLVIFNGDKL
                     YHRITPLRRGERRIALTLQYVTDVQMAPLLRFVSTMKDAIAYFGFRSLFQRGAA"
     gene            complement(2678..3136)
                     /locus_tag="VE844_06415"
     CDS             complement(2678..3136)
                     /locus_tag="VE844_06415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00991.1"
                     /translation="MNWQSELHNTLAALDREKLKAEFKSQNEFLVIEHFLPRSVLEAF
                     IACLPALEPKIHRNYILRHKKGGSISRFDLDRLAPVFGEFYRLPEWHAWLNEFTEGDL
                     LLCPISDPHTYALYYYTEPEDHMGWHYDTSYYQKALYRLDGSCRSIELQA"
     gene            3200..3811
                     /locus_tag="VE844_06420"
     CDS             3200..3811
                     /locus_tag="VE844_06420"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HZC00992.1"
                     /translation="MNLSRFRPFTGSSIGILVLAWAGLATAPAQETKRPLETEKEQLE
                     LERQRLELEKKQLELQRKQLQMEEAAREELQLKETEKAITMKLEGDVLFDFDKAEIKP
                     EAERTLDQVGTVIGQFPEGKVLIEGHTDSKGSPDINLELSKRRAEAVKDWLVKKKGVP
                     ESIITSRGSGETKPVAPDTNPDGSDNPQGRQQNRRVEITVEKT"
     gene            3814..4500
                     /locus_tag="VE844_06425"
     CDS             3814..4500
                     /locus_tag="VE844_06425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012912032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protocatechuate 3,4-dioxygenase"
                     /protein_id="HZC00993.1"
                     /translation="MKSEHPIQGRRQFLQCLAFGAWALTVRGTFAEELTRTPRQTEGP
                     FYPNTLPLDTDNDLLIVNDSITPAVGEITHLTGRALSPVGEPIRNAVVEIWQVDNNGI
                     YLHTKSPNREQRDENFQGFGRFLTSSTGEYYFRTIKPVPYTFGIKRTPHIHFIVKKGE
                     KRMLTTQVYVKGHPLNEQDFVFQGIPSVARGSVLVDFKPIKDSPIGELAAHFDIVISN
                     TPEGPSEDRF"
     gene            4535..5530
                     /locus_tag="VE844_06430"
     CDS             4535..5530
                     /locus_tag="VE844_06430"
                     /inference="COORDINATES: protein motif:HMM:NF013507.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kelch repeat-containing protein"
                     /protein_id="HZC00994.1"
                     /translation="MRTVLVILILGVLLGAYLFYVRGVGVQPELGAPQAIERQGGTRT
                     YAWTQKAEMPTARTEVTAAVLDGKVYVIGGFDGFSRTVATVEVYDSATDDWRSAPDLP
                     EARHHAVAVTVGDTLYVIGGFTGTGFEPKAEVFALKVQGAWQRVAALPEARGALAAAV
                     VDNRILAVGGVGPQGLANDLFIYEPVTDVWTKKTPAPTRRDHLAAGTLGGLLYVAGGR
                     EKSLSKNLSTVEVYDSASDTWRAGPGMPTARGGVAGAVFDGLFVVAGGEQPSGTFSEV
                     EAFDPVSNHWLSLPPLPTPRHGLAAAAVGNTLYIIGGGKRPGLSVSGSNEALEVR"
     gene            complement(5596..6078)
                     /gene="tsaA"
                     /locus_tag="VE844_06435"
     CDS             complement(5596..6078)
                     /gene="tsaA"
                     /locus_tag="VE844_06435"
                     /inference="COORDINATES: protein motif:HMM:TIGR00104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HZC00995.1"
                     /translation="MERGGLKIMTNDPITLQPIGYVRTDIADADIPRRRSQILSELIL
                     LESYTEALDGIEEYSHLFVLFWMHRVNIQEYRAKIHPRGRKELPLTSVLATRGRNHPN
                     PLDLAVVELLERNANRLKVRRLDAFNGTPIIDIKPYDPYDVFPDIRVPDWWHRLRQQA
                     "
     gene            complement(6165..>6503)
                     /locus_tag="VE844_06440"
     CDS             complement(6165..>6503)
                     /locus_tag="VE844_06440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC00996.1"
                     /translation="SMEILGRVTRGLAAYIYSIDYSPEKKRISIKFVKSPQEPLIDRI
                     LTFSNIQQFSDEKNWDEIEDSGYLDLLIGLDEYPERSGVKYVVHTDQREIIFVTDRQP
                     VLREVSTERG"
BASE COUNT         1456 a         1803 c         1804 g         1440 t
ORIGIN      
        1 gcggcttcga cgaagtcgct ggcctggatc atttcgattg tccctgcgca aaatccccag
       61 cccggtcaag atcgtcgagc gaattgacgt ccagccagtg tccatgaatg taaagcacct
      121 tcacgggctt accttgggcg atcagatgat ttaaaaggtc cggcagattc aggtgcttga
      181 aatcgcccgg ttctctcaat ctatccaggg cctctgaaag ccattgggat cctcggcccc
      241 gtgcccgcag catgccgatc cagcggcccg agggcgcttt cgagccgagc ctggcttcag
      301 ggctgatttg cagtagatcg acatcccgat tgagccacaa gcggtcatcg gggcttgaac
      361 aataagcata gtcagggcgg ccactggccg ggggtgtggc cgtggaatcg acgaccacta
      421 cgatctcctc gcgccgatcc aggagatccc tcaagatata gcttctgaac aagagatctc
      481 catacagtac gaccatatct tcgccgaatc cagcgcgcgc acagttgagc gaggcaagct
      541 gcccggtatg ctcgtacgcc gggttgagca gcagccggat ccccagcaca tcaatcgctt
      601 cgggtttgta gccagcgacg accgtaatgg tgttgatacc ctgcttcttg aactcatcga
      661 ccaagcgccg aagtagcggt ttgcctccaa ttggcaccat gaccttggga cgggtgtgag
      721 tcaagcggtc cagctcctgc ccccggcttg ccgcaagcac caccgcctgg ggcgccggct
      781 gattcggtgc gatataacgc ttttcggcct cctggagctc ctctgcgcct tgcaagcgga
      841 agatctcatc gaccgtggca atatgatctt ccatatgcac cgggctttca ttgtcatgga
      901 tagcctgggc gacgctctgc atgccggcca cagccgtgcg gatcatgtgg ttcgcccaga
      961 tcactaagtt tatcccggcc ttgcggtata cctccaccgg cgtactgtag tatttggtgg
     1021 gcacgatgac cagcggggcg cgaccggccc attcgttggc aaatgccacg atctgatcgg
     1081 gccgggataa tttactgtgg atcaggatgg catccgcccc cgcggcatga taggactccg
     1141 cccggcgcag ggcctcgctc agatcccagc ccgcgatcaa ggcctcgacc cgggccacga
     1201 tgcaaaaatc cggatcggac tggctatcct tgccggcctt gatcttgccg cagaattcat
     1261 cgatatcggc gagcggctga cgttcactgg cgatgaagct attggtcttg gggaagcgct
     1321 tgtcctcgat acagaccccg gcgatcccgc gctgttccag cttctttacc aagcgccgca
     1381 ggttattgaa attgccataa cccgtgtcgc cgtccaaaag tatcgggatc tgggtaatat
     1441 ccgacatgaa ctccagcatc tccaccacct gggtccagct cgcttcatta ttgtcgcgca
     1501 ccccatattg cgccgacagc gcgagtccac tcgcccagat ccctttaaag cctgcctcct
     1561 ccacgatgcg ggcgctgatg ccattgtgcg cctccatgag gaagtcaagt tgcggggatg
     1621 cgataagctc atgcagtcga gcgcactttg agcggcgaat gacttcaggt ttattcatct
     1681 agaagtttgg gcaggatctc gtgctcagca cgccggatat cttcagggaa atcgatctcg
     1741 atccagggca gaccggtgat gtcctcaaat ccaaactcat gaggggtagc tcggagtaaa
     1801 tcccggatcg cctcttcgta aggttggtca cgccacccgt gttctaggta atagcaagcc
     1861 cgctcggcga gccttgcggc catggccttg gaaaatcgga aggatccgac tgactcccca
     1921 cagaaatcat aaaccagttc atgactcagg tgcttgcgaa attccaccag ttgatcggcg
     1981 cgaacacaga gcttgaccgg ctcatcgccc gcctcaaata cgcggtctag aaggaaacag
     2041 tttgggaagg gggtcgttat taaccgtttg agcatacggc ggtcgtagag gacatcggca
     2101 tccattaata gcagatcctc ctcgaccata tgctccctta aggcccagag actgacgatg
     2161 ctcccttgcg tataatcggg attgtacacc gtgctcgcgg agataccccg tgccttcagc
     2221 tcctcatgaa tgcattgcgc ctgatatccg acggcgatga ctacctcctc aataccaagc
     2281 tgccgtaggc aatggaggtg gcgttcgagc agcgagcggc ctttgaatcg aagcaagcat
     2341 ttgggccggt cgttgctctc tttacccaat cgctgccctc tacctgcagc taatatcaat
     2401 gctttcatgg attgttcagg ccgcacctcg ctgaaacagg cttctaaaac cgaaataggc
     2461 gatagcgtct ttcatagtag agacaaaacg cagcaaggga gccatctgaa catccgtgac
     2521 atattgcagg gtgagggcaa tgcgcctttc acctctcctc aagggtgtga tccgatggta
     2581 cagtttatcg ccgttgaata tcaccaaggt accgggagtc aatgccagcg catgggtctc
     2641 gggcttatga tctccatcat cgcggtaaag ctgatactca agcctgcaac tcgattgatc
     2701 ggcaagaccc atcaagacgg tataacgcct tttggtaata agaggtgtcg taatgccaac
     2761 ccatgtggtc ctccggttcc gtgtaataat aaagcgcata ggtatgggga tcacttatcg
     2821 gacagaggag cagatccccc tcggtgaatt cattcaacca ggcgtgccat tccggtaatc
     2881 gataaaactc tccaaacacg ggggcgaggc gatcgagatc aaaccggctg atactgcccc
     2941 ctttcttgtg ccggaggatg tagtttctat ggatcttggg ctcaagcgct ggaagacaag
     3001 cgatgaaagc ctccagtacc gagcggggca ggaaatgctc gatcaccaga aattcgttct
     3061 gagacttaaa ttcggctttg agtttttctc ggtccagggc agccaaggtg ttgtgaagtt
     3121 cagattgcca gttcatactt tgattatttt atttggctga gatccgaaag tgtagtatag
     3181 ctaatcttag gtgattatta tgaatctatc acgatttcgt ccatttaccg gatcatcgat
     3241 cggcatactg gtgctggcgt gggcgggctt ggccactgcg cctgcgcagg aaaccaaacg
     3301 cccccttgag acagaaaagg agcagcttga gctcgagaga cagaggctcg agctggagaa
     3361 gaagcagttg gagttgcaac gtaagcaact gcagatggag gaagccgcgc gggaggagct
     3421 tcagctcaag gagactgaaa aggccatcac catgaaactc gaaggcgacg tgctttttga
     3481 tttcgacaaa gccgagatca aacccgaggc agagcggact ctcgaccagg tggggaccgt
     3541 gatcgggcag ttccccgagg gcaaggtgct catcgaagga cacaccgatt ccaaaggctc
     3601 gccggacata aatcttgagc tttcaaaacg gcgtgcggag gcagtaaaag actggctagt
     3661 gaaaaagaaa ggcgttcccg aatcgatcat cacgagccgc ggctctggtg agaccaagcc
     3721 agttgcgccg gacacaaatc ccgacggcag cgacaacccg caaggccgac agcagaaccg
     3781 gcgcgttgag atcacggttg aaaagacgtg agcatgaaat ccgagcatcc aatccaaggt
     3841 cgtcggcagt ttctacaatg ccttgcgttc ggtgcttggg cgttgaccgt tcgcggaacg
     3901 tttgccgaag aactgactcg aacgccacgg cagactgaag gcccgttcta tccgaacacg
     3961 ctccccctgg acactgacaa cgacctgctg atcgtcaacg actccatcac gcccgctgtg
     4021 ggagagatca cgcacctcac tggacgggct cttagtccgg tgggagaacc gatccgcaat
     4081 gcggtcgttg aaatctggca ggtggataat aacggcatct atctgcacac taaaagcccc
     4141 aatcgcgagc aacgcgacga gaatttccag ggctttgggc gtttcctcac cagttcaacg
     4201 ggcgaatatt acttccgcac catcaagccc gtgccttaca cctttgggat caaacgcacg
     4261 ccgcacatcc acttcatcgt caagaagggc gaaaagcgga tgcttacaac acaggtgtat
     4321 gttaaaggtc atccgctgaa tgagcaggat tttgtttttc aaggcatccc aagcgtggca
     4381 cgcggatccg tcctggtcga tttcaagccg atcaaggatt caccaatcgg ggaattggcg
     4441 gcccatttcg acatcgtgat cagcaacacg ccagagggcc cgtccgaaga tcgattctaa
     4501 ctcagctaat cgcaggcttt acgatggaga gaagatgaga actgtactgg tcattctgat
     4561 cctcggggtc ctcctgggcg cttatctgtt ctatgtccgc ggggtaggtg tgcaaccgga
     4621 gctcggtgct cctcaggcaa tcgaacgcca aggtggcaca cggacgtacg cgtggacgca
     4681 gaaggcggag atgccgaccg cccgcacgga ggtcaccgcg gccgtgctcg acggcaaggt
     4741 gtatgttatc ggaggatttg atggattttc aaggactgtc gctactgtag aggtctatga
     4801 ctcggccacg gatgattggc gtagtgcccc cgacctgccc gaggcccgac atcatgcggt
     4861 ggcggtcacg gtgggagaca cgctttatgt catcggcggg tttacgggta ccgggttcga
     4921 gcccaaagct gaggtgttcg ccttgaaggt gcagggagca tggcagcggg tggcggcgct
     4981 cccggaggca cgcggcgcac tcgcggcagc cgtcgtcgat aatcgcatcc tcgcggtggg
     5041 cggtgtcggt ccgcaggggc ttgccaacga cctctttatc tacgaacccg ttacggacgt
     5101 ctggaccaaa aagacgcctg cacccacccg gcgtgaccat ctggccgcag gcacgctggg
     5161 tggtcttctc tatgtggccg ggggtcgcga aaaatcgctc tctaagaacc tctctaccgt
     5221 agaggtctat gactcggcga gcgatacctg gcgtgcgggg cctggtatgc cgactgcgcg
     5281 gggcggtgtg gcaggggcgg tcttcgatgg gctgtttgtg gtggcgggcg gtgagcagcc
     5341 cagtggaacg ttcagtgagg tggaggcttt cgatccagtc tctaatcact ggctctccct
     5401 gccacctcta cccacacctc gccatggcct cgccgccgct gcggtcggga acaccctcta
     5461 tataataggc ggtggaaaga ggcccggtct ctctgtctcg ggcagcaacg aggccctgga
     5521 ggtccgctga gactggccgc caatagcctc tgggcatggc gaaagatctt gcagttgcta
     5581 tacaacaggc agcctttagg cttgctgcct taaccggtgc caccagtcgg gtacgcgaat
     5641 atcggggaag acatcatagg gatcataggg tttaatatcg atgatggggg tgccattgaa
     5701 ggcgtctaag cgccggactt taagccgatt ggcatttctt tccagcaatt cgaccaccgc
     5761 cagatccagc ggattgggat gattgcgccc gcgtgtggct agcacactgg tgagcggcaa
     5821 ttcttttctg ccgcgaggat gtatcttggc tcggtactcc tgaatattta ccctgtgcat
     5881 ccaaaacagt acaaacagat gagaatactc ttcaatgcca tctaaagctt ccgtataact
     5941 ttccagaagg ataagttcag agaggatttg tgaacgtcgg cgggggatat cggcatcggc
     6001 tatatccgtt cttacataac cgatgggctg gagggtaatg gggtcgttcg tcatgatctt
     6061 gagacccccg cgttccacat caggacgcag ccttgttccg tacggttctc ttcggtcttc
     6121 tcaatgcaac attctctcta taggctatta cgctactgca agacctaacc cctctccgtg
     6181 ctcacttccc gcagtactgg ctgccgatcc gtgacgaaaa taatctctcg ctgatcggtg
     6241 tgcaccacat actttactcc tgatctttct gggtattcat caaggccaat aagcaaatca
     6301 aggtacccac tatcctcgat ttcatcccag ttcttttcgt ctgagaactg ttgaatgttc
     6361 gagaatgtta ggatccgatc aattaatggt tcctgtggac tcttaacaaa cttaatactg
     6421 atccgtttct tttcggggga atagtcgatg ctgtaaatat aagcggccaa acccctcgtt
     6481 actctcccta agatctccat tga
//
LOCUS       DASQSL010000624         1423 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_19036, whole genome shotgun sequence.
ACCESSION   DASQSL010000624 DASQSL010000000
VERSION     DASQSL010000624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1423
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19036"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(109..1223)
                     /locus_tag="VE844_06445"
     CDS             complement(join(109..803,803..1223))
                     /locus_tag="VE844_06445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611722.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC00997.1"
                     /translation="MPKKKYLVDLSTGERETLHQLVRRGKHSSRKVTRARILLLAADG
                     STDGQIIAALKTACATVERTRKRFVEEGLACLNERPRRGAQRKLTGKQEAHLVAVACS
                     TPPEGHARWTLKLLAGKVVELGLAVSITRETVRQVLKKNELKPWLKEQWCIPEVSAEF
                     VACMEEVLDLYAEPDDERRPVVGFDETSKQLIAETRVPLPAKAGHLARYDYEYSRHGI
                     RNLLLFCEPLRGYRHVAVTEQRTMQDFARQMRWLVDDGYPEADVIRVVLDNLNTHKPA
                     ALYETFAPAEARRILRKLEFHHTPKHGSWLNIAEIELSVFSRQCLDRRIGDEETLTRE
                     IEELEEERNAARTKIAWRFTTADARQKLHRLYPSTSD"
BASE COUNT          265 a          431 c          398 g          329 t
ORIGIN      
        1 ccacggcacg gcagatgccc cgtaacgaaa tccgctccac cagtaagcgt tcaatcaata
       61 gagtttattt cgattaggct gcaagtgccc atagagccta gtagtccgtc agtctgaagt
      121 tgaagggtaa aggcgatgta acttctgccg tgcatctgcg gtcgtaaaac gccacgcgat
      181 tttggtacgg gcggcattgc gctcctcttc caattcctcg atttctcgcg tgagcgtttc
      241 ttcgtcaccg atgcgcctgt ccagacattg acggctgaag acgctcaact cgatctcggc
      301 gatgttcaac caactgccat gcttcggcgt gtggtggaac tccaacttcc gcaggatacg
      361 gcgcgcttct gcgggcgcga atgtctcgta cagcgcagcc ggcttatgcg tgttcaggtt
      421 atcgagcacg acgcggatca cgtctgcctc cgggtagccg tcatccacca gccatctcat
      481 ctgccgggcg aagtcttgca tagtgcgctg ttcagtgacg gccacatggc ggtagccccg
      541 caacggctca caaaacagca agaggttgcg tataccatgg cggctgtact cgtagtcgta
      601 gcgtgcgagg tgtccggctt tcgctggcag cgggacgcgc gtctcggcaa tcagttgttt
      661 actcgtttca tcgaacccga cgaccggacg ccgctcgtca tccggttcag catacaagtc
      721 cagcacctct tccatgcagg cgacgaactc ggcgcttact tcgggaatgc accattgctc
      781 tttgagccac ggcttgagtt cgtttttttg agcacctgtc gcacggtctc gcgagtgatc
      841 gagacagcca atcccaactc gactactttg ccagccagca atttgagcgt ccagcgcgca
      901 tgtccttccg gcggcgtgct gcacgcaacg gcgacaaggt gcgcctcttg cttccctgtg
      961 agcttgcgtt gtgcgccgcg gcgagggcgc tcattcaagc atgccaaccc ctcctcgacg
     1021 aaacgcttgc gcgtgcgctc gaccgtagcg cacgcggttt tgagcgcggc gataatctgc
     1081 ccgtcggtcg agccgtctgc cgccagcagc agaatgcgtg cgcgcgtgac tttgcgcgac
     1141 gaatgcttgc cgcgcctgac gagttggtgc agagtttcgc gctcgccggt tgataaatcc
     1201 acgaggtact ttttcttggg catatctggt tcacctccat tcgtcgggct aaaccagact
     1261 ataccctctc aaggagctga tcctcaaaac cttctggacg gaccactagg tgaggacccg
     1321 cttgctgggt aaggagtgtg acgttccatg ctcctttcga cgtcgtcggc gacgtccgct
     1381 accggtttgt catcgacatg gcttcgctca aggcgtgact aat
//
LOCUS       DASQSL010000625         3137 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_182335, whole genome shotgun sequence.
ACCESSION   DASQSL010000625 DASQSL010000000
VERSION     DASQSL010000625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3137)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3137)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3137
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182335"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..462)
                     /locus_tag="VE844_06450"
     CDS             complement(<1..462)
                     /locus_tag="VE844_06450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018268084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HZC00998.1"
                     /translation="MDKAKPFDISKRQVWEAYKRVRANQGAAGVDGQSIAAFEEDLEN
                     NLYKLWNRLASGSYFPPPVRRVDISKRDERDGTRPLGIPTVSDRVAQGVAQAYLEPEL
                     EKYFHPDSYGYQRGKSAIDAVRVARQRCWRYDWVLDLDIRSYFGSIDWELLM"
     gene            complement(597..1859)
                     /gene="ltrA"
                     /locus_tag="VE844_06455"
     CDS             complement(597..1859)
                     /gene="ltrA"
                     /locus_tag="VE844_06455"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019910324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZC00999.1"
                     /translation="MVDKVYKRKNLELAWSKVKSNAGAAGIDGQSIEAFEAQLDEQLD
                     RMHAELRDGTYQPLPVRQQLIPKAGQPGKYRPLGIPSIYDRVCQQALLNRLEPIFEPV
                     FDDASFGYRRGRSTKDALRKVWGEIAEGSEWIVDADLKNFFGLVDHDKLLTLVNQRVS
                     EGRVLRLIDQMLKAGCIAEGKWLETGQGTAQGGVVSPILSNILLTPFDWEMRKRGYRL
                     TRYADDWVVTCRTRVEAQRALVDAKKILTALGVTLNEEKTHIVHVSHGFEFLGYKIKR
                     GSRPLALASSKIRSGTREGDLYAYPREKSIQHFKEQVRNRTRRKAPVDTQTLIADINP
                     VIRGWGQYFCKAHVRKLFARLDRWILRRIWSHRFKRWRCRGWKQLPERCLYGEMGLVR
                     LVYLIPSLNLRRKRILVKAGCRKTARPV"
     gene            complement(2044..2196)
                     /locus_tag="VE844_06460"
     CDS             complement(2044..2196)
                     /locus_tag="VE844_06460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01000.1"
                     /translation="MEDLSVTSGGLARFLDGTGISDPISESEVGSEAGRVVGQSSSTS
                     SGMKVT"
BASE COUNT          602 a         1064 c          751 g          720 t
ORIGIN      
        1 catcaggagt tcccagtcaa tgctgccaaa atagctccgg atgtcaagat cgagcaccca
       61 gtcataacgc caacagcgtt gacgtgcaac cctgactgca tcaatcgccg atttccctcg
      121 ctggtaccca taagagtcag gatggaaata cttctccaac tccggctcca ggtacgcctg
      181 ggccacccct tgagccaccc ggtccgagac cgtcggaatt cctaacggcc tcgtcccgtc
      241 tcgttcatcc cttttggaga tgtcgacccg acgcacgggc ggcggaaagt aactccccga
      301 cgccagccga ttccagagct tgtagaggtt gttttctaaa tcctcttcaa acgccgcaat
      361 cgattgcccg tctacaccgg ccgctccttg gttggctctt acccgcttat acgcctccca
      421 cacttggcgt ttggaaatat caaatggctt cgccttatcc aacagattcc tcccatcgct
      481 ggttgaccta tcaataaagc cgaacaatgt tgccccttca ctccagctcc attaccgagc
      541 cttcctcgct gtcgggtcgg aggaggcgca cttgcgtgct ggcctccgtc cgccactcaa
      601 actggacgtg cagttttcct gcatccagct ttcaccaaga tgcgctttcg gcgcagattg
      661 agtgaaggaa tcagatagac taagcgcaca aggcccatct ccccatagag acaccgttcc
      721 ggtagctgtt tccagccccg acagcgccag cgcttgaatc gatgcgacca aatgcgccgc
      781 aggatccaac ggtcaagacg ggcgaagagc ttgcggacgt gagctttgca aaagtactgc
      841 ccccagccgc gaataaccgg attgatatca gcgatcagcg tctgtgtatc cacaggcgct
      901 ttgcgtcgcg tgcgattgcg gacttgctcc ttaaagtgct ggatcgattt ctcgcgcgga
      961 tacgcgtaga gatcaccctc tcgggtgcca ctacgaatct tgctggacgc cagcgcaaga
     1021 ggccgactgc cccgcttgat cttgtaccca agaaactcaa aaccatgtga cacatgaacg
     1081 atgtgcgtct tctcctcgtt cagcgtcacc cccagcgccg tcagaatctt cttagcatcg
     1141 accaaggccc gctgtgcctc aacacgggtg cgacacgtca ccacccagtc gtcggcatag
     1201 cgcgtcagcc gatagcctcg ctttcgcatt tcccagtcaa acggagtcag tagaatgttg
     1261 ctcaagatcg gggagacaac cccgccttga gccgtgccct gcccggtctc cagccacttg
     1321 ccctcggcaa tacaccccgc cttgagcatt tgatcaatca gtcgcagcac tcgaccctct
     1381 gagacgcgct ggtttactag ggtaaggagc ttgtcatgat ccaccaaccc aaagaaattc
     1441 ttcagatcag cgtccacaat ccactcgctc ccttcagcga tttcgcccca aaccttgcgc
     1501 agagcatcct tcgtcgatct ccctcgccga tatccgaagc tggcgtcatc gaatacgggt
     1561 tcaaagatcg gttcaagccg attcagtagc gcttgttggc ataccctgtc gtagatagag
     1621 gggatgccta gcgggcgata cttacccggc tgcccggcct tcgggatcag ttgctgacgc
     1681 accggcaggg gttggtaggt accgtctcgc agctccgcat gcatacgatc gagttgctca
     1741 tccaactgtg cctcgaacgc ttctatgctt tgcccatcga tcccagccgc cccggcgttg
     1801 ctcttcacct tcgaccaagc taactccaag ttcttgcgct tgtagacttt gtctaccaat
     1861 gagtgaacct tcctctctcc ggtcggattc aaccactcgg tgagtctcct gggactatga
     1921 cttctgggtc tttcactaaa ggaacttgtc cgcgtcatcg tctttactca tctcacgttc
     1981 gtatcgtctc caaccctctc agccagccgc cttccccagc acactccgct gccgcttccg
     2041 cggtcacgtg actttcatcc cgcttgaggt actactcgac tgtccgacta ctcgcccggc
     2101 ctcgcttccc acttcgctct cgcttatagg gtcacttatc ccggtgccat ccaggaaccg
     2161 ggcgagtcct cctgaggtca cgctcagatc ttccataccg tgccatccgc aaacaccttg
     2221 atacggtggg tgaatgagaa cgccttcgcc ccctgagtcg gggctcgacc ttgccccacc
     2281 tttggccgac cggttcatca acggggtggc cccctcgatt acggcccggt atttctcctc
     2341 atgcctttcg gatcccacct cgcgatggac accctgccct ccggagtacc ccaagaagct
     2401 ggctccaggt ccgccttggc cgtctccgac tttcgccttc gtgcccgttt aggcttcacc
     2461 ataccttcct tctttccccg gccagcgagg cattaccccc gctttcggat atggcgcccc
     2521 tcatccaagc gccagaggga ctttaaccct cctgatctgg gcgctgccca gcacacacta
     2581 cgacccgatc cgccacccgg gtgcctacgc cgccacttcc cactcacggt tatagacgac
     2641 gcctcctcga cgaggtttcc tcgccgggca ccacgggctt ctccagttga cccatcctcc
     2701 ttcgtaccat gtcgccgctg ataccccgcc ggtgaggacc gtcgtatcgg actcctttcg
     2761 aacggccctt gctgccttcg cacgttatag agcgtctcgg ccaccggaat agcgtgtaac
     2821 gaggctacct ctacgttcac tgcacggtgc aacctggtac tttgccaata ctttatttca
     2881 agtacgttgt cggagggctc cgccgtcttg ctctcgcgcc acggcgcctc ccaggctacg
     2941 aggcctgagt cttttagcct cggtcggact tccaccgact ggagaatgtg cccttcactg
     3001 gacacggcca ccggccatct tctaagataa atcgctacca ctatgcgcgc tgttgccatc
     3061 gggagattgg tcacgagcag tttagtctgt ttggggctgt cgttacgccg ccgtcgactg
     3121 aggatcacgg tgacatc
//
LOCUS       DASQSL010000626         1300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_5158, whole genome shotgun sequence.
ACCESSION   DASQSL010000626 DASQSL010000000
VERSION     DASQSL010000626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5158"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..205
                     /locus_tag="VE844_06465"
     CDS             <1..205
                     /locus_tag="VE844_06465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01001.1"
                     /translation="PAFVSVFDLRKTISFFKKLRKATPMDFIALLARPLAKDSSNDPY
                     HLNFRYFIDEVNRLSHCNRVHSD"
     gene            complement(202..684)
                     /locus_tag="VE844_06470"
     CDS             complement(202..684)
                     /locus_tag="VE844_06470"
                     /inference="COORDINATES: protein motif:HMM:NF024752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC01002.1"
                     /translation="MERPQDPTEQTRCYSGKKKCHTVKNVLLINAALTILFLSETYAG
                     STHDKRMADATPYPLPPGSRLLQDLGFLAFTLDQVEIIMPTRKPRGRALTRVQKTANR
                     CIARRRVRIEHVNSSVKRCRIVHDTSRLRKAGVRDGMMEVCCALHNFRVRLTPWQPMV
                     "
     gene            complement(600..1154)
                     /locus_tag="VE844_06475"
     CDS             complement(600..1154)
                     /locus_tag="VE844_06475"
                     /inference="COORDINATES: protein motif:HMM:NF025000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC01003.1"
                     /translation="MGSLRFIDIQARPTEVLDLTSLTVDEFQQLSPPFEAAFQAHMAR
                     WRLDGRPRTARPYTTYKNCPLPTPEDRLLFILVYLKTYPLQVVQGRLFGMGQSKAHQW
                     IHVLLVVLQATLRTLGEAPTRSLTDLAKRIGVAEAKAAPPALTSPLLDTMAPNGVLSA
                     PRIRLSKRAVIAARKNATRSKTSY"
BASE COUNT          251 a          389 c          384 g          276 t
ORIGIN      
        1 gccagcgttt gtctccgtgt tcgatctccg aaaaacaatc agttttttca aaaagctacg
       61 taaagccacc cccatggatt tcatcgcgct tctggctcga ccgcttgcca aagactcctc
      121 taacgatccc tatcatctca acttccgcta ttttatcgat gaggtaaatc gtctttcgca
      181 ttgcaataga gttcattccg attaaaccat cggttgccac ggtgtgagac gcacgcgaaa
      241 gttatgcagg gcgcagcaga cttccatcat gccatcgcga acgcccgcct tccggaggcg
      301 gctggtgtcg tggacgatgc ggcaacgctt gacgctgctg ttgacgtgct caatgcgcac
      361 gcggcggcgg gcgatacacc gattcgccgt tttctgcacc cgtgtgagag cccggcctcg
      421 cggcttccgg gtcggcatga tgatctccac ctgatcgagc gtgaacgcca ggaagcccag
      481 atcctggagc aagcggctgc ctgggggcaa gggatacggc gtagcatccg ccattcgctt
      541 gtcgtgcgtg ctgccggcat acgtctcact cagaaagagg atcgtgagcg ccgcgttgat
      601 cagtaggacg tttttgaccg tgtggcattt tttcttgccg ctataacagc gcgtttgctc
      661 agtcggatcc tgggggcgct caatacgccg ttcggtgcca tcgtgtccaa aaggggggag
      721 gtcagcgccg gcggtgccgc cttggcctcg gctaccccga tgcgcttggc gagatccgtc
      781 aaggaccggg tgggggcctc cccgagcgtg cgcagcgtcg cctgcaagac caccaagagg
      841 acatgaatcc actgatgggc tttgctctgg cccatcccga acagccgccc ctgcacgacc
      901 tggagcggat aggtcttcag gtagaccagg ataaacaaga gccgatcctc gggtgtcggc
      961 agggggcagt tcttgtacgt ggtgtacggc cgggcggtgc gtggccgtcc atcgaggcgc
     1021 cagcgggcca tatgagcttg gaacgcggcc tcaaagggtg ggcttaactg ctgaaactcg
     1081 tccaccgtga gactcgtcaa atcgaggacc tctgtcggcc gggcctgaat gtcgatgaac
     1141 cgtaaactcc ccatgactgt gccctccctt cttcggaggc acaggatacc gcaaatcgag
     1201 attaactcta atatgtccct tcccccctgg tggggggcaa gaatgttcgg caccaatctt
     1261 ggtaggaggg ctcaccagga ccccctcccc ctcgacgtgg
//
LOCUS       DASQSL010000627         1128 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_194572, whole genome shotgun sequence.
ACCESSION   DASQSL010000627 DASQSL010000000
VERSION     DASQSL010000627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194572"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..551)
                     /locus_tag="VE844_06480"
     CDS             complement(<1..551)
                     /locus_tag="VE844_06480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01004.1"
                     /translation="MPVGSTLLTEVGRLISQSRVIATAVQGRLDRVIQSARSRLVAMH
                     EVIKPLMGQIVHWLTTGKVAANKIVHVGIPQARAIVRNKAGKKTEFGLAYLISRLGGG
                     YVFGERIAANADERQMPLKALAGYRAIFGPKATPELVVYDRGGDSTPTRQKLALAGVK
                     DIGIQPKGKRPWSVAEAVRDQVR"
     gene            602..802
                     /locus_tag="VE844_06485"
     CDS             602..802
                     /locus_tag="VE844_06485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01005.1"
                     /translation="MYSLWTVVATTMLQRLKALKTLLGLYLNRRQAKALLEQVQASDL
                     NDEARDRISQILRLMLRLPKDS"
BASE COUNT          230 a          361 c          301 g          236 t
ORIGIN      
        1 ctgcggactt ggtcccggac tgcctcggca accgaccagg gtcgtttccc cttgggctga
       61 atcccaatat ctttgacacc ggctagagcc agtttctggc gcgttggggt cgaatcgcca
      121 ccgcggtcgt agaccaccaa ctccggtgtc gcttttggac caaatatcgc tcggtagccc
      181 gcaagggcct tgagcggcat ctgcctttcg tccgcattgg ccgcgattcg ttcgccaaat
      241 acatagccgc cgcccaagcg gctgatcaga taggccaagc caaactccgt cttcttgccg
      301 gctttgttgc gcacgatggc ccgcgcttgc ggaatgccca catgcacgat tttgttcgcc
      361 gccactttgc ccgtcgtgag ccagtgcacg atttgaccca tcagcggctt gatcacctcg
      421 tgcatggcca ccagcctgga gcgggcactt tgaatcaccc gatccaaacg cccctgcacg
      481 gctgttgcga tgacacggct ctgactgatc agccttccca cttcggtcaa gagtgtgctt
      541 ccgacaggca tgcttgactt ctcattttgt atccgttaca tcagacacct aatctcgacc
      601 gatgtactcg ctctggacgg tggtggccac cacgatgctt caacggctca aagctctcaa
      661 aaccctgctg ggcctctacc tgaaccgacg acaagcgaag gcgttgcttg agcaagtcca
      721 agccagcgac ttaaacgatg aggctcgaga ccgcatcagc caaatccttc gattgatgct
      781 caggcttccg aaggactctt gatccgggtc atcttcatct cccattccct tgcaggcccg
      841 cccccaccac cacaccaagc caaggatcgg ggtcaatcgg ccaacacctg acgctgtcat
      901 ccgcgcgacg cgcggtgatc ggctgggctt gacaagctgc caagcaaccg ttacatctac
      961 ccatcacggt gccaagcgtc gatctgagtc tcgaaggatg aagggtgaag ccgtcagcgg
     1021 aaaacgtgac cctgagtcgc gaagaggtcg agagcctgat ggctcaggtg catcagagta
     1081 atttgccagc ggcggtggcg aggcgtctgg aagagatcgc ccgcacat
//
LOCUS       DASQSL010000628         1123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_85278, whole genome shotgun sequence.
ACCESSION   DASQSL010000628 DASQSL010000000
VERSION     DASQSL010000628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85278"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..323)
                     /locus_tag="VE844_06490"
     CDS             complement(<1..323)
                     /locus_tag="VE844_06490"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC01006.1"
                     /translation="MEGLLMDAYRAGKPATFSPEQIVKLIAVACEPPQHSGRPITRWS
                     SRELAAKMVKRGIVKRIARSTISQLLKEAKIKPHLSRYWLNAQPEDEAVFDAQVRAIC
                     ALYRQA"
     gene            complement(232..729)
                     /locus_tag="VE844_06495"
     CDS             complement(232..729)
                     /locus_tag="VE844_06495"
                     /inference="COORDINATES: protein motif:HMM:NF024776.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC01007.1"
                     /translation="MINLFYTFFIETSQHLLNHWIAGSRQVLALLGAGGKRRPPPAVI
                     DPVPGGRVLLSERQGRLLEALVRRSSAPQRLVKHAQMILLLAAGKRFNQVARALGVLR
                     QTVYKWGKRWWTQARRLAEVEGQACPDHVLSRVVGRVTDGRLSGWQTRHLQPRADRQA
                     DCRSL"
     gene            complement(873..>1123)
                     /locus_tag="VE844_06500"
     CDS             complement(873..>1123)
                     /locus_tag="VE844_06500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01008.1"
                     /translation="YRIRGGEPVTMRVSSARLYVDAQGKKRFVLALKYEGQVIAHALA
                     HTSHRDLKNGKNKIYPLRCVSNGMLFFMPMRDQKSGKL"
BASE COUNT          231 a          355 c          305 g          232 t
ORIGIN      
        1 gcctggcgat agagcgcaca aatagcgcgc acctgggcat caaagacggc ctcgtcctcc
       61 ggctgagcat taagccagta gcgactcaga tgcggtttga tcttcgcttc ctttaacaac
      121 tgactgatgg tgctgcgcgc gatcctcttc acaatccccc gtttgaccat cttagccgcc
      181 aactcccgcg aactccagcg cgtgatcggc cggcccgagt gctgcggggg ttcacaggct
      241 acggcaatca gcttgacgat ctgctcgggg ctgaaggtgg cgggtttgcc agcccgatag
      301 gcgtccatca gtaacccttc caacaaccct gctcagcacg tgatcggggc acgcctgccc
      361 ctccacttcg gccaaccgcc gcgcttgtgt ccaccagcgc ttaccccact tgtagacggt
      421 ctgacgcagc acccccaagg cccgcgccac ttgattaaac ctcttgccgg cagcgagcag
      481 taaaatcatc tgggcgtgtt tgaccaatcg ctgcggcgca ctcgagcgtc tcaccaacgc
      541 ttccaacaag cgcccttgcc gctcactcaa caggaccctc cccccgggca ctgggtcaat
      601 caccgcgggc gggggcctgc gcttgccccc cgcgcccagc agcgccagca cttgccggct
      661 gccggcgatc cagtggttca gtaggtgctg actggtctca ataaagaagg tataaaagag
      721 attgatcata aaggttcctg ggcaaaatga tgactacccc agcgggcctg gcactgagct
      781 agcgcagggt gttcgtttgt gcgaccacca gcagtgtata cgaatttctc ggcagggata
      841 ctaggctgtc gaaatcacag gtcatatacg cgctatagct ttcccgattt ttggtccctc
      901 attggcatga aaaaaagcat gccgttgctg acgcagcgta gcgggtatat tttgtttttc
      961 ccattcttga gatcgcgatg agacgtgtgg gctaacgcgt gagcgatgac ctgcccctca
     1021 tacttaagag cgaggacaaa gcgtttcttg ccctgggcat cgacatacag gcgggcactg
     1081 ctgacacgca tggtgacggg ctccccccca cgaatgcgat acc
//
LOCUS       DASQSL010000629         1312 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_142058, whole genome shotgun sequence.
ACCESSION   DASQSL010000629 DASQSL010000000
VERSION     DASQSL010000629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1312)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1312)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1312
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142058"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            159..1100
                     /locus_tag="VE844_06505"
     CDS             159..1100
                     /locus_tag="VE844_06505"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01009.1"
                     /translation="MPELMWLYLTAMLYYRTIASCVALSEALRTVSHDRLTRLLHADW
                     SGHTRLELACRTLFVWERGYLIIDDTVVPKPFATTIEGLAWVFSSQERKPVYGLSLVL
                     LVWTNGTLRVPLGVRLWHKGGPSKYALALELLGYARNRLRCRPAYVLFDAWYPSKVLL
                     KRIHDYRWYFVCRLKKNRRFNGYAVRHHRRHPYWAESGWLTGGLKVLVVRYGAKYYAT
                     NRLTLSAAEVRRLYRVRAQIEEVIRVCKDQLSLTGCQARSERAQLHHISCCLVAFCVL
                     ERERHDQQLSIYQLKRRLSFQGPAYALPALERLKRAA"
     gene            complement(1058..>1312)
                     /locus_tag="VE844_06510"
     CDS             complement(1058..>1312)
                     /locus_tag="VE844_06510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01010.1"
                     /translation="INRKWPFILADRLHAEITIGFDVKNNTCGLLAVGRFGADIRPFL
                     KTSRQKEQLQSSQVKKYLCEVLCDDRSYAARFRRSRAGNA"
BASE COUNT          268 a          371 c          377 g          296 t
ORIGIN      
        1 tccgcatgga tcgggccagc aggagaggta tgagggacat tggcgtgcct ccatatgggg
       61 cgacgacttg gggtgtgcct ccttaaaggt caggggttac gcagaggcgg tgagatagaa
      121 tagagttctc gtccaaccgt cacgaaggag agaactccat gccagagctg atgtggctct
      181 acctcaccgc gatgctgtac tatcgcacaa tcgcaagttg cgtggccttg tcagaggcgc
      241 tgagaactgt gtcacatgac cgtttgacaa gattgctgca cgctgactgg tccgggcaca
      301 cacgcctgga actggcctgt cgcacgcttt ttgtctggga acgggggtat ctcatcattg
      361 atgacacagt cgttcccaag ccctttgcca ccacgattga gggcctcgct tgggtcttct
      421 ccagccagga acgcaagcct gtatatggcc tctccctagt gttgttggtc tggacaaatg
      481 ggacgctccg cgtcccgctg ggtgtgcgcc tgtggcacaa gggcggcccc tcgaagtatg
      541 cgctcgccct ggagttgctc ggctacgccc gcaatcgcct gcgctgtcgc cctgcctatg
      601 tcctgtttga cgcctggtat ccttcaaagg tgctgctcaa gcgcattcac gactatcggt
      661 ggtatttcgt gtgccgcctc aagaagaatc gccggttcaa tgggtacgcg gttcgccacc
      721 atcgacggca tccctactgg gcggaaagcg gctggttgac aggcggtctg aaggtcttgg
      781 tcgtcagata cggcgccaag tactatgcca ccaaccgcct gacgctgtcc gcggcggaag
      841 tccggcggct gtatcgcgtt cgcgcccaga tcgaagaggt gatcagagtt tgcaaggacc
      901 aactcagcct gacgggctgt caagcgcgct ccgagcgggc ccagctccat catatcagtt
      961 gctgcctagt ggccttttgt gtgctcgagc gggaacggca tgatcagcaa ctcagtattt
     1021 accaactcaa gcgccggctc agtttccaag gtcctgctta tgcattacca gccctggagc
     1081 gtctgaaacg agctgcgtaa ctcctgtcat cacacaggac ttcacagaga tacttcttga
     1141 cctgcgaaga ttgcagctgt tccttctgcc gagatgtctt gaggaaaggc cgaatatctg
     1201 caccaaaacg acctacggca agtaacccac aggtattgtt cttgacatcg aagccgatgg
     1261 tgatctccgc gtgcagacga tctgctaaaa taaatggcca cttacggttg at
//
LOCUS       DASQSL010000630         1550 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_19071, whole genome shotgun sequence.
ACCESSION   DASQSL010000630 DASQSL010000000
VERSION     DASQSL010000630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1550
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19071"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..392)
                     /gene="minD"
                     /locus_tag="VE844_06515"
     CDS             complement(<1..392)
                     /gene="minD"
                     /locus_tag="VE844_06515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008405202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HZC01011.1"
                     /translation="MDGRAIVVTSGKGGVGKTTVTANLGSVLAQSGGKVCLIDADIGL
                     RNLDVVLGLENRIVYHVVDVIAGRCQLKQALIRDKRNENLYLLPASQSDDKNAVEPEQ
                     MRQLCQDLKKEFDYTLIDCPAGIEQGFR"
     gene            complement(469..1215)
                     /gene="minC"
                     /locus_tag="VE844_06520"
     CDS             complement(469..1215)
                     /gene="minC"
                     /locus_tag="VE844_06520"
                     /inference="COORDINATES: protein motif:HMM:TIGR01222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004857 - enzyme inhibitor activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HZC01012.1"
                     /translation="MAQEKRRFLHTQQAKVVFKGVGQEVRVILDPLAPYSEIERELEE
                     HLERSGRFFAGAAVTLEVGTRQLRDDQLQQIRQTLSTYGLTIAEIRASLADSVRPSPP
                     LPLASPPPISTAAAPIATRHERLPEDEELPRNNARLIRGPLRSGQRVYAEDNLVVFGD
                     VNPGAELIAGGDIVVMGVLRGVAHAGVPDNSAAVIAALSLKPTQLRIGYFISRSPEFQ
                     EKQDSGPEIARVDAEQIVIDSFPRRLLGAS"
BASE COUNT          311 a          481 c          446 g          312 t
ORIGIN      
        1 ttccgaaaac cctgttcgat gccggcagga caatcgatga gcgtgtaatc gaactccttc
       61 ttgagatctt gacacagttg ccgcatctgc tcaggctcga cggcgttttt atcatcgctc
      121 tgcgaggccg gcagcaggta caggttttcg ttgcgtttat cgcgaatgag ggcttgtttc
      181 agctggcagc ggccggcgat gacgtcgacg acatggtaga cgatacggtt ttccagaccc
      241 aacaccacgt cgaggttgcg caagccgatg tccgcgtcga tcaaacacac cttgccccca
      301 ctctgcgcca agacagagcc gaggtttgcc gtaacggtcg tcttccctac gccccctttg
      361 cccgaagtaa caacaatagc ccgaccatcc atgcgcctaa tccccctctc ccgcgccgtc
      421 gccctgcggc ccgccggggt tcccgccgct gagcggccag acttccgcct acgaggcacc
      481 gagaagccgc ctaggaaagc tatctatgac gatttgttcg gcatcaactc ttgcgatttc
      541 agggccggag tcctgcttct cttgaaattc gggtgagcga ctaatgaagt agccgatccg
      601 tagctgggtg ggtttcaagc tgagggcggc gatgaccgcc gcgctattgt ctggaacccc
      661 agcatgggcc accccccgca gcacccccat caccacaata tcaccccccg cgatcaactc
      721 tgctccggga ttgacgtcgc cgaagacgac gaggttatcc tccgcgtaga cgcgctgccc
      781 agaacgcaag gggcctctga tgaggcgcgc gttgttgcgt ggaagctcct catcctccgg
      841 caggcgttca tgacgagtcg caatcggcgc ggccgccgtg gagatcggag gtggtgatgc
      901 gagggggaga ggaggggagg gccggacact gtcggccaaa ctggcgcgga tctcggcaat
      961 ggtgagaccg taggtggaga gcgtctgtcg gatttgctgg agctggtcat cgcggagttg
     1021 gcgcgtcccc acttcgagtg tgaccgccgc ccctgcgaag aatctccccg agcgctcgag
     1081 atgctcctcg agctcacgct caatctcact atacggtgcg aggggatcga ggatcacacg
     1141 gacctcttga cccaccccct taaagacgac cttggcctgt tgggtgtgta ggaatcgacg
     1201 cttctcctgg gccatcgcac cgtttccatt gcctcagcct gagcagacca ctcacccgat
     1261 gtggctgctc attctatccg tttggcggag attgtcaaga ggctctatca ctcgtaaaaa
     1321 caagaatata cccgcaaaca ctcgaatgaa aagagcgtct tcttttttta ggaaaacgca
     1381 cagccctaag aaatcgacaa taccccgatg gagagccccg cagtcgccgc tccggcgaca
     1441 caacgctttg ccccctcaac gggggccgat aagggtaggc atcaggcaag gcgccctttt
     1501 ctccctggca ggggaggatt caggtgtggg gtgagcctca ggtgtccccc
//
LOCUS       DASQSL010000631         1797 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_155893, whole genome shotgun sequence.
ACCESSION   DASQSL010000631 DASQSL010000000
VERSION     DASQSL010000631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1797
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155893"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            101..>1797
                     /locus_tag="VE844_06525"
     CDS             101..>1797
                     /locus_tag="VE844_06525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015171266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HZC01013.1"
                     /translation="MPHTSNTIQKTPLPPQGRWQFWIDRGGTFTDIVAQSPEGRLLSL
                     KLLSENPEQYADAALAGIRRLLGLAQDQPIPAEQIEVVKMGTTVATNALLERQGERTL
                     LLITRGFRDSLRIGYQNRPQIFARRIVLPELLYERVAEVTERVNAAGEVQVPLCLESA
                     QKALVEAYREGIRAVAIVFMHSYGYPDHERQVASLARALGFTQISASHEVIPLMRLIS
                     RGDTTVVDAYLSPLLQRYVAGLMRELGGTRLMFMQSNGGLARAHFFQGKDAILSGPAG
                     GIVGAVKICEAAGFHKVISFDMGGTSTDVALYQGEYERSFETVVAGVRLRVPMMRIHT
                     VAAGGGSIVHFDGARFQVGPDSAGADPGPACYRRGGPLTVTDCNVLLGRIQPEFFPQI
                     FGPNHAGPLDREIVQARFAALGQDIARATGKHLPPVEIAEGFVTIAVENMANAIKTIS
                     IGRGYDVTEYTLCAFGAAAGQHACQVADALGIKRIVCHPLAGVLSAYGIGLADQRLIK
                     EQAMEVALSQAALPSLAAALETLVLEGRTALLAQGMITEAQIHTVKKLRLRYAGSDTA
                     "
BASE COUNT          344 a          525 c          558 g          370 t
ORIGIN      
        1 gatttctaca cgcccattat ggctaattgt tatgaaaagc accaggatat ccgagagatt
       61 cgccaaagtt ggaacaacac cctttagcgt gtcaagtgcg atgcctcaca cctctaatac
      121 gattcagaag acaccgttac ctccccaagg ccgctggcag ttttggatcg accgtggagg
      181 caccttcacg gatatcgttg cccaatcgcc cgaaggacgc cttttgagcc taaagcttct
      241 atcggagaac ccggaacagt atgccgatgc agcgttggca gggatccggc ggctgctcgg
      301 cctcgcccaa gatcagccca tccccgccga gcagattgaa gtggtcaaga tgggcacgac
      361 cgtcgccacc aatgccctgc tcgagcgcca gggcgagcgt accttactgt tgatcacacg
      421 tggcttccgc gatagcttgc gtatcggtta tcagaaccgg cctcagatct ttgcccgccg
      481 tatcgtgtta ccggaactgc tctacgagcg cgtggccgag gtgaccgagc gtgtcaatgc
      541 tgccggcgag gtgcaggtgc cgctttgtct tgaaagcgcg cagaaggcgc tggtcgaagc
      601 ctaccgtgag ggtatccgtg cggtggctat cgtcttcatg catagctacg gctatcccga
      661 tcatgagcgg caggtagcct cactcgcccg ggcgctcggc ttcacccaga tctccgcttc
      721 ccatgaggtg atcccgctga tgagactgat cagtcggggc gataccaccg tagtcgatgc
      781 ctatctatct ccccttttgc agcgctatgt ggctgggctt atgagggaac tcggcggaac
      841 gcggttgatg ttcatgcaat cgaatggggg actggctcgg gcgcattttt tccaaggcaa
      901 ggatgccatc ctctcagggc cggccggtgg catcgtaggg gccgtcaaga tctgcgaagc
      961 cgcaggcttc cataaggtca tcagcttcga tatgggcggc acatccaccg atgtggccct
     1021 ctatcagggc gaatacgagc gcagcttcga aaccgtggtc gccggtgtgc gtctgcgcgt
     1081 gccgatgatg cgtatccaca cggtggcggc ggggggcggg tcgatcgtgc attttgacgg
     1141 cgcccgattt caagttgggc cggactctgc cggcgccgat cccggacccg cctgctaccg
     1201 ccgcggcgga ccgctgacgg tcaccgattg caatgtgctt ttgggcagga tccagccgga
     1261 attttttccc cagatcttcg gtccgaatca cgctgggccg cttgatagag agatcgtgca
     1321 ggcgcgtttt gcagccttgg gccaagacat tgccagggcg acgggcaaac acctcccacc
     1381 cgtggagatc gcggagggat ttgtgaccat cgcggtcgag aacatggcca atgcgatcaa
     1441 aacgatctct attgggcgcg gctacgatgt taccgagtat acgctttgtg cctttggcgc
     1501 ggcggcgggt cagcatgcgt gccaggtagc ggacgcattg ggcatcaagc ggatagtctg
     1561 ccacccgttg gcgggtgtgc tctcggccta cggtataggg cttgccgatc agcggctgat
     1621 caaagagcag gccatggagg tggcgctctc ccaagcggcg ctcccaagcc tcgcggcggc
     1681 gctcgaaaca ctggttctcg agggacggac cgccctgctg gcgcagggga tgatcaccga
     1741 ggcacagatc catactgtca agaaactgcg gctgcgttat gcgggcagcg atacggc
//
LOCUS       DASQSL010000632         2414 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_85296, whole genome shotgun sequence.
ACCESSION   DASQSL010000632 DASQSL010000000
VERSION     DASQSL010000632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2414
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85296"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            82..363
                     /locus_tag="VE844_06530"
     CDS             82..363
                     /locus_tag="VE844_06530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013033262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HZC01014.1"
                     /translation="MSSPERAALIRARLEEAFHPSDLAVIDESHKHRGHAGAARGGGH
                     FNVTIVSNAFTGCPLLKRHRLIYEALSDLMKSEIHALSIKAWAPGEYPP"
     gene            360..1490
                     /gene="dapE"
                     /locus_tag="VE844_06535"
     CDS             360..1490
                     /gene="dapE"
                     /locus_tag="VE844_06535"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009014 - succinyl-diaminopimelate
                     desuccinylase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HZC01015.1"
                     /translation="MSSTLELAMELIRRPSVTPVDAGCQALIAARLARLDFAIEPLPF
                     GNVENLWARRGETKPVLVLAGHTDVVPPGPLEAWQSDPFKPEIRDGRLYGRGAADMKG
                     GLAAMVTAVERFVARYPGHSGSIAFLLTSDEEGPAVNGTAKAIEALQARGELFIDWCL
                     IGEPTGEKTLGDVIKNGRRGSLNGTLRVKGVQGHVAYPMRADNPIHRVIPALSELCAT
                     IWDRGNQAFPPTSFQISNIHAGTGADNVIPGDLELLFNFRFSTESTAQSLQQRVVDIL
                     DRRGVNYSCDWCLSGEPFLTGDGRLLQATRQTIRAITGLETQTSTSGGTSDGRFIAPL
                     GVEVTELGPLNATIHKVDECVPVNDLDTLSRIYEQVISLLLC"
     gene            complement(1600..>2414)
                     /locus_tag="VE844_06540"
     CDS             complement(1600..>2414)
                     /locus_tag="VE844_06540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018049885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="inositol-3-phosphate synthase"
                     /protein_id="HZC01016.1"
                     /translation="HEEVVRLLREAGAEVLVNYLPVGSEEATRFYADCALEAQVAFVN
                     NIPVFIASDPAWAKRFEDKRLPLIGDDVKSQLGATILHRTLTDLFKRRGVKLEHTYQL
                     NTGGNTDFLNMLNCHRLASKKRSKTEAVQAVAAERLAEEDIHIGPSDYVAWQKDNKVC
                     FIRMEGRLFGDVSMNLELRLSVEDSPNSAGVAIDAIRCAKLALDRGKSGVLHAPSAYF
                     CKHPPLQYTDDEAYRLTEAFIQGGLGEPHEVPERKDKHFPLTAGNKLSSSAS"
BASE COUNT          513 a          698 c          659 g          544 t
ORIGIN      
        1 ctgggcaaac gcggatcctt acctcgaggc cggtgtctat aaacgggtca cggtcaaacc
       61 cttcaaaaag gtattcccct agtgtcttcg ccagagcgag cagccctcat ccgggccagg
      121 ctggaagagg cattccatcc ctccgatcta gcggtgatcg acgagagcca taaacatcga
      181 gggcatgcgg gtgcggctcg gggaggcgga cactttaacg tcactattgt ctccaacgcg
      241 tttacaggct gtcccctgct caaacgccac cgcctgattt acgaggcttt aagcgatctc
      301 atgaagagcg agatccatgc cttgagcatc aaggcctggg caccgggtga atatcctcca
      361 tgagttccac cctcgagctc gcgatggagc tgatccggcg cccttccgtc accccagtgg
      421 atgccggttg tcaagccctg attgccgcaa ggcttgcgcg cttggatttc gctattgagc
      481 cgctgccctt cggcaatgtc gagaacctct gggccagacg tggagagaca aagcctgtgc
      541 tggtcctggc cggccataca gatgtggtcc ctccgggtcc tttagaagct tggcagtccg
      601 atccatttaa gcccgagatc cgcgacggcc gtctctacgg acgcggggct gcggatatga
      661 agggcggtct cgccgctatg gttacggccg tcgaacggtt tgtagcccgc tatcctggtc
      721 attcgggctc catcgcgttt ttgctcacca gtgatgagga gggccccgca gtcaacggca
      781 ccgccaaggc gattgaggcc ttgcaagccc ggggtgagtt gttcatcgac tggtgcctga
      841 tcggtgaacc caccggtgaa aaaaccttag gtgatgtaat taaaaatggc cggcgtggct
      901 cactcaatgg cacgctcagg gttaaagggg tccaaggcca tgtggcctat ccaatgcggg
      961 cagacaaccc gatccaccgg gtgatcccgg cgctttcaga gctctgcgcc acgatctggg
     1021 ataggggtaa tcaagccttt ccgcccacca gctttcaaat ctcgaacatt cacgccggaa
     1081 ccggggccga taatgtgatc ccaggtgatc tggaactcct gtttaacttt cgcttttcga
     1141 ccgaatcgac cgctcaatcc ttacaacagc gcgtcgtcga catcctggat cggcgcgggg
     1201 tgaactatag ctgtgattgg tgcttgtcgg gcgaaccctt tctgaccggc gatggccgct
     1261 tgctccaggc aacccgccaa acgatacgtg cgatcacggg cctggagacg caaacttcca
     1321 cttcgggagg cacctccgac ggccgcttta tcgcccccct cggtgtggag gtgaccgaat
     1381 taggcccctt gaatgcgact atccataaag tggatgagtg tgtccctgta aatgacctcg
     1441 ataccctctc gcggatctat gagcaggtga taagtcttct gctctgctaa accctattct
     1501 ccaccttcta gtgcatcctt ttctgtcata cttgtatagc atcggattat tgctatacat
     1561 gattcatgag atctgttcat gttatttttg caagacgcct taggaggccg aggaagaaag
     1621 cttattgccc gccgtcaaag ggaagtgttt atccttacgt tcaggcactt catggggttc
     1681 tccaagaccg ccctggataa atgcctcggt caggcggtaa gcctcatcat ccgtatactg
     1741 caagggcggg tgtttgcaga aataggccga tggggcatgc aataccccac ttttgccgcg
     1801 atcaagcgcg agcttagcac agcggatagc gtcgatggcg acgccagcgg agtttgggga
     1861 atcctcgacc gaaagcctca gttccagatt catggacaca tcgccgaaca gccttccctc
     1921 catgcggata aagcagacct tattgtcctt ttgccaggcg acatagtcgc tcgggccgat
     1981 atggatatcc tcctcggcca gccgttcagc agcaaccgcc tgaaccgcct cggttttcga
     2041 tcgcttcttg gaggctaagc ggtggcagtt cagcatattg agaaaatccg tattaccccc
     2101 ggtgttcagc tgatacgtat gttccagctt gacaccgcgc ctcttgaaca gatccgttaa
     2161 ggtccgatga aggatcgtag cccccagttg agatttgacg tcatcgccga taagaggcag
     2221 gcgcttgtct tcgaaccgtt tagcccaggc cggatcactg gcaataaaga cagggatatt
     2281 attgacaaag gcgacctgcg cttccaaagc acaatcggca tagaagcggg tagcctcttc
     2341 cgatcccacg ggcaggtaat tcaccaggac ctctgccccg gcctctcgca gtaagcggac
     2401 cacctcttca tggg
//
LOCUS       DASQSL010000633         1239 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_194599, whole genome shotgun sequence.
ACCESSION   DASQSL010000633 DASQSL010000000
VERSION     DASQSL010000633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1239
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194599"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..206
                     /locus_tag="VE844_06545"
     CDS             <1..206
                     /locus_tag="VE844_06545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01017.1"
                     /translation="FSSSRAKAGSEIGEDHFGIRLAIDGETGGILTAPGQNKAAGGQG
                     SAVRRAGAGLLGTHPMALTTYWY"
     gene            complement(264..977)
                     /locus_tag="VE844_06550"
     CDS             complement(264..977)
                     /locus_tag="VE844_06550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007921337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
                     /protein_id="HZC01018.1"
                     /translation="MRSATPNPYKHHRFPGEIINHAVWLYFRFPLSHRDVEELLFVRG
                     VIVSYEAIRKWCRKFGQQYANQLRRRRPRPGDKWHLDEVFITINKERHYLWRAVDQDG
                     TVLDILMQRRRDKHAAKKFFRKLLKGCQYVPRVLITDKLKSYGAAQRESLPSVEHRQH
                     HYLNNCAENSHQPTRQRERRMRGFKSPGQAQRFLSAYGPMAQHFRPRRHRLSAPEYRH
                     EMRKRYQVWGEITGVELAA"
     gene            1089..1239
                     /locus_tag="VE844_06555"
                     /pseudo
     CDS             1089..1239
                     /locus_tag="VE844_06555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014286547.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
BASE COUNT          257 a          331 c          389 g          262 t
ORIGIN      
        1 tgttctcctc ctcacgggcg aaggctgggt ctgagatagg tgaagatcac ttcggtatac
       61 ggctggctat cgacggtgag actggcggca tcctcacagc gcccggtcag aataaagcgg
      121 caggaggtca agggtcggcc gtccgccgtg cgggcgctgg cctcctgggt acacacccga
      181 tggcattgac aacttattgg tactgacatc gtcgtgaggc aacaaaggga tatgagcaga
      241 ggagcttcgg acgcactcca ccctcaggca gccagctcta caccggtgat ctccccccac
      301 acctgatatc ttttgcgcat ttcgtgacgg tattcaggtg cagacaagcg atgccggcgc
      361 ggtcggaagt gttgggccat aggaccatag gcggagagaa accgttgtgc ctgtcctggg
      421 gacttgaagc ctcgcatgcg ccgctcccgt tggcgtgttg gctgatggga gttctccgcg
      481 cagttattga gatagtggtg ctgccggtgt tcgacactgg gcaggctctc ccgctgtgcc
      541 gccccatagc ttttgagttt atcggtgatg agcacccgtg ggacgtactg gcatcctttg
      601 aggagcttgc ggaagaactt cttggccgcg tgcttgtccc gtcggcgttg catgaggata
      661 tcgaggacag tgccgtcctg atccacggcc cgccacagat agtgacgttc cttgttgatc
      721 gtgatgaaca cctcatctaa atgccactta tcgcctggcc gaggacgccg gcgacggagt
      781 tgattcgcat actgctgccc gaacttccga caccacttgc ggatggcttc gtacgacacg
      841 atgaccccgc ggacgaacag gagttcttcc acatcccggt ggctgagagg gaagcggaaa
      901 tagagccaga cggcatggtt gataatctca ccggggaacc gatgatgttt gtagggattc
      961 ggcgtcgctg agcgcatcat ggcagcttcc cacaagatgc tgactggttg agaagaccag
     1021 actcctctct gcaggaactg cggaggtggg acgagtatgc cacgtcgagc tgaggctgta
     1081 taggggacac aacggttaag ttgtcaatgc cgaagggcga gtggtactat ctgtaccgca
     1141 cggtggacaa gtatgggaag accatagacg ttgtgctgac caagcagcgc gatgagaaag
     1201 cggccaagcg gtttctgacc aaggccatcc gccgtcatg
//
LOCUS       DASQSL010000634         1871 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_167179, whole genome shotgun sequence.
ACCESSION   DASQSL010000634 DASQSL010000000
VERSION     DASQSL010000634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1871
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167179"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(325..1656)
                     /locus_tag="VE844_06560"
     CDS             complement(325..1656)
                     /locus_tag="VE844_06560"
                     /inference="COORDINATES: protein motif:HMM:NF017416.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01019.1"
                     /translation="MIAQTFDEVFSPQWINTHLSHPTHGLIILRQLIPWQPIIDGLVP
                     FYNLKKGRTGCALRTLIAVSILARLRLLSDRQVIAHIQENRYMQYFCHVPEQHLRTFM
                     PPSTLCRFRKRLGQQGISHIEDEVFTCLKQADVIETDMMLMDATVLQSPILYPTDVRL
                     LYKAFDKMARLATEGHLEPWWDTAHLKRRWRAYHLDRGQHRPYLEEFYTLLQPALAGL
                     QERLALRQAPCDNHQEKVLQARWRRLIEVLTLLHEQTQQKLAGQRHIENRLVSLDDLD
                     ARPLQKGKSHPKTEFGTTLQMTFNRQGFLITTDNFIGQPNEKTLYPETLERFRRRMET
                     YPGGAVTDLGYRSAKNRKLHHQDIDYVFMGKSSDVDEAQQAACRAARSATEGFIAVAK
                     NLRGFGQSLYRGLLGAPIWSRLNQCAYNLKKFLQLYRQEALSEATLMKLRL"
BASE COUNT          382 a          474 c          572 g          443 t
ORIGIN      
        1 gttatctgcc tagcatgact cgttttcaaa ttcccaaata tccaaaacat aactgacatc
       61 gtggcttctc catagatgct ggccgaatag ctacttagta tctgctgatt ttcccctgca
      121 ttgagagatc gcggggttat ccatagggca agtctgaggt caaatcggat cgcatgatga
      181 cacgttgagg gagccaagac gcaactctgt cagttccgcc cctttgttgg ctgatgggat
      241 ggcgcacagg taacgtcgtc ggccagaggc ctctttggga aggagccctt gaacggaccc
      301 gagtgcgctc acagcctcga tggcttagag gcgcagcttc atcagcgtcg cttctgacag
      361 ggcctcctgt cggtaaagct gaagaaactt tttcagattg taagcacact ggttgagtcg
      421 gctccagata ggggccccga gcaggccgcg gtagaggctt tgcccaaagc ctcgcaggtt
      481 cttggccacg gcaatgaagc cttcagtggc cgagcgcgcc gcgcgacacg ccgcttgctg
      541 ggcctcgtcc acatccgagc ttttgcccat gaagacatag tcaatgtcct ggtggtggag
      601 cttgcggttt ttggcactgc ggtagcctaa atccgtcacg gcgccgcccg gataggtctc
      661 catgcgcctt cgaaagcgct ccagcgtttc aggatagagc gtcttttcat tgggttggcc
      721 aatgaagttg tccgtggtga tcagaaagcc ttggcggtta aacgtcatct gaagggtggt
      781 gccaaattcg gttttgggat ggctcttgcc cttctggagg gggcgggcat cgaggtcatc
      841 gagcgagacc aagcggtttt caatgtggcg ctggcccgct aatttctgtt gggtttgctc
      901 atgcagaagc gttaacacct caatcaagcg gcgccatcgg gcctggagca ccttttcttg
      961 gtggttgtcg cagggcgctt ggcgcaacgc caagcgctct tgaagaccgg ctagagccgg
     1021 ctgcaagagg gtgtagaatt cctccagata ggggcggtgc tggccccggt cgaggtggta
     1081 agcgcgccag cgcctcttga ggtgcgcggt gtcccaccag ggctcgaggt ggccctcggt
     1141 ggcgagcctc gccattttat caaaggcttt gtagagcagc cgaacatcgg tgggatagag
     1201 gatggggctt tgcaacacgg tggcatccat cagcatcatg tcagtctcga tgacatcggc
     1261 ttgcttgaga caggtaaaga cctcgtcttc aatgtgcgag atgccttgtt ggcctaggcg
     1321 ttttcggaag cggcacaggg tcgagggagg cataaaggtc ctgaggtgtt gctccggaac
     1381 atgacaaaag tactgcatgt agcggttttc ttggatgtgt gcgatcacct gtcgatcgct
     1441 gagcaggcgc agtcgcgcca ggatggagac ggcgattagg gtgcgtaagg cgcagccggt
     1501 acgacctttt ttgaggttgt agaacggcac gagaccgtca atgatgggct gccaagggat
     1561 gagttgacgc aggatgatca ggccatgcgt cggatggctc aggtgggtat tgatccactg
     1621 gggcgaaaac acctcgtcaa acgtctgtgc tatcatggta gggacctctg ttgggggtgt
     1681 cgatcaacgt caatttcgac atgatctcac ccattagctc gactttggcc atttggagtc
     1741 tttgaaaaaa caccagcaga cagcgtaagc tgaggaaaaa ctgcttcgcc aaaaggagtc
     1801 ttttccatgc tgaccctgcc tgccgtgttg tcgcctctga ttgtagagtt tgcaccgctc
     1861 ttttccaagc c
//
LOCUS       DASQSL010000635         2461 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_142091, whole genome shotgun sequence.
ACCESSION   DASQSL010000635 DASQSL010000000
VERSION     DASQSL010000635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2461
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142091"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..616
                     /locus_tag="VE844_06565"
     CDS             <1..616
                     /locus_tag="VE844_06565"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01020.1"
                     /translation="QSVRSRLHQTKRPQHKFVTHLLGLLLMLPGHATFRNLSRYSPYH
                     ERTFARWYGSTFDWVLLNQAAITEVVPSEHEQALVMDASFVPKSGTHTYGLDRFWNGS
                     HSRAEKGLEISTLAWLDITDNCAYALSVEQTPTSAETSDPEATRMDVYLDQLSRVVQA
                     HDLRFLRYVVTDGAYSKQKFVAGVRALELHQIGKLRADAHLRYL"
     gene            683..1195
                     /locus_tag="VE844_06570"
     CDS             683..1195
                     /locus_tag="VE844_06570"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01021.1"
                     /translation="MSRFERLGTEDEHIVLYHHVLNHVQLKRNLQVVVVVHSQRKRYA
                     VLFSTDVDLESQRLYRYYKARFQVEFLFRDAKQFTGLSDCQARSKAKLDFHFNASLSA
                     VTFAKLEARHQNGHGDQAFSMASLKRRAFNQHLVNRICEHLANGQSLDKSSPDYEALC
                     NYGIIAEEAA"
     gene            1344..>2461
                     /locus_tag="VE844_06575"
     CDS             1344..>2461
                     /locus_tag="VE844_06575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01022.1"
                     /translation="MSRSILSLPPEQLTSFDLDAFIAHAEALNEQNRQTFTTPFPKAS
                     SRWLSHYAFTPHPIVFTSQGDVDGGLSWLVGVTLDLSFTRSLCATSYGTRGGSCYDPA
                     SLVFLEVAAKVDQYVDYAQFCRDLHDSDKGRRYRQLAGLHGPVADEDDLCHFRYRMGE
                     AVIDQITAVAVDLLHRFGLIKGELLSTDGQLEPSYARYKGCTYACQDCRALPIDDAGQ
                     QALREQFRSGAKRLQLTCPFPDVVQKVRDATAKSGTPRDPKMAVLELEVLSNTATSAS
                     DRQQVAVLLGLPPEQVPPVRLKWCHLQRAPQGELLASCPKVPSDLQAKVGYHIDTQDP
                     SKKERVFGYCHLQTTDLNRELGLELPLGNPTYAADAHEG"
BASE COUNT          532 a          789 c          636 g          504 t
ORIGIN      
        1 ccaaagtgta cggagtcgtc tccatcaaac caagcgaccg cagcacaagt ttgtcaccca
       61 tttgttgggg cttctgctca tgctccctgg acacgctacc tttcgcaatc tgagtcgcta
      121 cagcccctat cacgagcgca cctttgcacg gtggtacggc agcacctttg actgggtctt
      181 gctcaaccag gccgcgatta ccgaggtcgt cccctctgag catgagcagg ctttggtcat
      241 ggacgccagt ttcgtgccca aaagtggcac gcacacctat ggcctcgatc gcttttggaa
      301 cggcagccac agccgggccg aaaaaggact tgaaatctca actttggcct ggctcgacat
      361 caccgacaac tgcgcctacg ctctcagcgt ggagcagaca ccaacaagcg ctgagacgtc
      421 tgatccagag gccacccgca tggatgtcta tctggaccaa ctgagccggg tggtccaggc
      481 gcatgacttg cgcttcctgc gctatgtcgt caccgatggt gcttacagca aacagaaatt
      541 cgttgccggt gtgcgagcct tggagctcca tcagattggc aagttgcgag ccgatgccca
      601 tctgcgctat ctctagcagg gccctaaacg cccagggcca ggtcgtcaaa agacctacga
      661 tggcaaagtc aactggagcg atttgtcgcg ctttgagcgc ctgggtaccg aagacgagca
      721 catcgtgttg tatcatcacg tgctcaacca tgtgcagttg aagcgcaacc tccaggtggt
      781 ggtcgtggtc catagccaac gcaagcgcta tgccgtgctt ttcagcaccg atgtcgacct
      841 ggagtcccag aggctctacc gctactacaa agcgcgtttc caggtcgagt ttctctttcg
      901 cgacgccaaa caatttaccg ggttgagcga ttgccaagcc cgctccaaag ccaaactcga
      961 ttttcacttc aatgccagtt tgagtgcggt gaccttcgcc aagctcgaag cgcgtcacca
     1021 aaacggccac ggcgaccaag cgttttcgat ggccagtctc aagcgtcggg ccttcaatca
     1081 gcacttggtc aatcgcattt gtgagcactt agccaacggg cagagtttgg acaaatccag
     1141 cccggattac gaagcgcttt gtaactatgg catcattgcc gaagaggccg cctaaattct
     1201 gtccgaagta ttgatattag gtagttgaag aattatgagc cttgtattat cggcgtttgc
     1261 gagggatcac atgcaaaatc aaccagcaag aggcatcata gcaggaccta tcaacaaccc
     1321 tcttttcgtc aggaggacct gctatgagcc gatccatttt atcgcttccc ccggagcaac
     1381 tcacgtcctt tgacctcgac gcctttatcg cccatgccga ggccctcaat gaacaaaatc
     1441 gacagacctt caccacaccc tttcccaaag cctcgagccg ctggctatcg cactatgcat
     1501 tcacgcccca tcccattgtc tttacgtctc aaggcgatgt cgatggcggc ctcagttggc
     1561 tcgtcggcgt caccctggac ttgagcttca cccgctccct gtgtgcgacg tcctatggca
     1621 cccgaggggg ctcttgctac gaccccgcca gcctggtgtt cctcgaagtg gccgccaaag
     1681 tcgatcagta tgtcgattac gcccagtttt gccgcgatct gcacgacagc gacaagggac
     1741 ggcgctaccg gcaactcgcc ggtctgcatg gccccgttgc ggacgaggac gatctgtgcc
     1801 acttccgcta ccgcatgggc gaggccgtca tcgatcagat caccgccgtc gccgtagact
     1861 tgcttcaccg ttttggcctg atcaaaggcg agctgctcag caccgatggc caactcgaac
     1921 cgtcatacgc ccgctataaa ggctgcacct acgcctgcca ggactgtcgc gctttgccga
     1981 tcgacgacgc tgggcagcaa gccctgcgcg agcagttccg aagcggcgcc aaacgcctcc
     2041 agctcacctg cccgtttcca gacgttgtcc aaaaggtgcg cgacgccacc gccaaatccg
     2101 gcacaccccg agaccccaag atggccgtgc tcgaactcga ggtgctcagc aatacggcga
     2161 catctgcctc ggaccgacag caggtggctg tactgctggg actgccaccc gaacaggtgc
     2221 cacccgtgcg gcttaaatgg tgccacctcc aaagggcacc ccaaggtgag ctgctggcca
     2281 gctgtcccaa ggtgccctcg gacctccagg ccaaggtcgg ctaccatatc gacacccagg
     2341 acccatccaa gaaagaacgc gtctttggct actgccatct ccaaaccacg gaccttaacc
     2401 gtgaactcgg cctggagcta ccccttggca accccaccta tgcggccgat gcccatgagg
     2461 g
//
LOCUS       DASQSL010000636         1008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_30105, whole genome shotgun sequence.
ACCESSION   DASQSL010000636 DASQSL010000000
VERSION     DASQSL010000636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30105"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            276..>1008
                     /locus_tag="VE844_06580"
     CDS             276..>1008
                     /locus_tag="VE844_06580"
                     /inference="COORDINATES: protein motif:HMM:NF012610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HZC01023.1"
                     /translation="MDLRLNRKSQLPLHIQLKAQLTHLVQAGQLAPGAQLPTVRQLAG
                     FLRINRNTVAKVFADLAREGYLSSEPGRGTFVSRAQAAVEQTAVRMRALSTLVDEAIH
                     KARQLGFSPEELSTALYVRTQTAVGQVHARKVPVLFIECNRPQLKRFSAQLQAALPLR
                     ITPLLVAELARKAQHSPAFLQRYGLVVTTFFHVHETQSLLAKSAIEVVGLLAEASLET
                     LMRLTTLPEGTKVGVACYEWIGTENV"
BASE COUNT          216 a          297 c          291 g          204 t
ORIGIN      
        1 catcatgttc acgttgtaag ctctgcttaa gcgtgtctgc aggctcggta atgaggggta
       61 gaggtttgtg catcgcctgc tctcctattg accgctgaaa ccctcggcaa ggatagcagc
      121 acgatgcact ctgttcaatc aaaacgcata taagatggct atcttcggaa cacccacagg
      181 ctgtcttgtc ccgggccttg acgaaaaaaa ctccttgaca aaatctcgcc tatattgtcc
      241 tattatcata ggacaatcgg ccaaggtaga gatccatgga cctgcgactg aaccgcaaga
      301 gccaactccc ccttcatatt caattgaagg cccaactgac ccacctggtt caggccggcc
      361 agttagcgcc gggggcacag ttgccgacgg tgcggcaatt ggctgggttc ctgcgcatca
      421 accgcaacac ggtggcgaag gtcttcgccg atctggcgcg cgaaggctac ctgtcctctg
      481 agcctgggcg ggggacgttt gtctctcggg cgcaagcagc agtggaacaa acggccgtga
      541 ggatgcgggc gctatcgacg ttggtggatg aagccattca caaggctagg cagctagggt
      601 tcagcccgga ggagctgtcg acggccctct atgtccgaac ccagacggcc gtggggcaag
      661 tccacgcccg caaagtaccg gtgctcttca tcgagtgcaa ccgaccccaa ctgaagcgtt
      721 tcagtgccca actgcaggcg gcgttgcccc tccgaatcac ccccctgctc gtcgctgagc
      781 tcgcgcggaa agcgcagcat agcccagcct ttctccagcg ctacggtctg gtagtcacga
      841 ccttctttca cgtccacgaa acccagagtc ttctggccaa gagcgctatc gaggtggtgg
      901 ggcttttggc cgaggcgagt ctggagaccc tgatgcggct caccacgctg ccagagggca
      961 ctaaagtcgg cgtggcctgt tatgaatgga tagggacgga gaacgtca
//
LOCUS       DASQSL010000637         1357 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_112358, whole genome shotgun sequence.
ACCESSION   DASQSL010000637 DASQSL010000000
VERSION     DASQSL010000637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1357
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112358"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(343..>1357)
                     /locus_tag="VE844_06585"
     CDS             complement(343..>1357)
                     /locus_tag="VE844_06585"
                     /inference="COORDINATES: protein motif:HMM:NF033592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC01024.1"
                     /translation="SDEHLWMGRQVHVVDGTGIALPDTEANQDAYPQPAQQKLGGGFP
                     VLRLVAFMSLATGAVSRYSLGNLHDHEQRLFQELRTHLQIDDVVLGDRNFGTFANLVL
                     LKRQGADGVFRRHQSRGAGVDTLKRLGQDDALVRWRALHHYRPPWLDALVDLPETIVV
                     REVTFQVTPPGFRTKSVTLVTTLLDAKTYPAWALAKLYLKRWRMELWLRDIKITMDMD
                     RLRTKTPARVRAELAMFLVGYNLIRTVLFDASKVSEARLEQLSFKSALVRFGLWCARL
                     GHGIQVVAWLREYTGILSDLARDLNPERPGRYEPRVVKRRPKKFPRMQQPRQVLREKL
                     LTA"
BASE COUNT          306 a          377 c          385 g          289 t
ORIGIN      
        1 ttggcacagc gatgtatggg ttgggtatgc ctgaatggca ctgacgcagt tataagtccc
       61 tttatcatca tatgcttacc cgattttcca gtctcggttt ttgggtcaaa gtaaaatatt
      121 attttcattg acaagtgccg agcaaggcag atatgagctg gtgtctcatg acgtcgatca
      181 ggacaggttc agacaggtcc aacacaggtt cacagcagat tcagaacgca cttctccctt
      241 cgcctaccct agaacctgac agactcggtt tggcgctttg agattgaccg actcatgtca
      301 aacaacaact acgtgtggac ctttgatctc cactcagagt catcaggctg taagcagctt
      361 ttcccgcaag acctgtcgtg gctgctgcat acggggaaac ttcttgggac ggcgtttgac
      421 cacccggggc tcatagcgcc cagggcgctc ggggttgaga tctcgcgcca ggtcgctcaa
      481 tatccctgtg tattcccgta gccacgctac cacttggatg ccgtgcccga gtcgagcgca
      541 ccatagcccg aatcgcacca gcgccgattt aaaactcagc tgctcaagcc gtgcttcgct
      601 caccttggag gcatcgaaca ggaccgtacg gatgagattg taacccacca gaaacatcgc
      661 caattccgcc cgtacacgag cgggggtttt ggtgcgcagc ctatccatgt ccatcgtgat
      721 cttgatgtcc cgcagccaca gttccatccg ccaccttttt aagtaaagct tagccaatgc
      781 ccaagccgga taggtcttgg catccaacag ggtggtcacg agcgtcaccg atttggtgcg
      841 gaagccgggt ggagtcacct gaaaggtgac ttcacggacc acaatcgtct cgggtaagtc
      901 caccaatgca tcgagccatg gggggcgata atggtggaga gcgcgccagc gcacgagggc
      961 gtcatcttga cccagacgct tgagggtgtc cacccccgcg ccgcgggact gatggcgacg
     1021 aaagacgcca tcggcacctt gacgcttgag caagacaaga ttggcaaagg tgccgaagtt
     1081 acggtcgccg agcacgacgt cgtctatttg caggtgagtg cgaagctctt ggaagagacg
     1141 ctgttcatga tcatggaggt tgccgaggct atagcggctc accgcgccgg tggccagaga
     1201 catgaaggcg acgagacgca aaacgggaaa gccaccgccg agcttctgct gtgcaggctg
     1261 aggataggcg tcttgattgg cctcggtatc gggcagggca atgccagtgc catcgacgac
     1321 atggacctgt cggcccatcc agagatgctc atctgag
//
LOCUS       DASQSL010000638         1171 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_100239, whole genome shotgun sequence.
ACCESSION   DASQSL010000638 DASQSL010000000
VERSION     DASQSL010000638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1171
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100239"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..480
                     /locus_tag="VE844_06590"
     CDS             <1..480
                     /locus_tag="VE844_06590"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZC01025.1"
                     /translation="SAEFEIQKTIGRFANSFDLKDWELMKSVLCDKVIVDYSDLRGDP
                     AQEVDSDTYVQSRKEALANLHTHHLIGNFETEFSQNSAKVRASSTIFRRSEDRVFNTH
                     AIYEFGLIKTVGTGWLIDSIKQSVLWNEGDSTVHKAAIGTAHKSLNRTPDNPGEVEC"
     gene            520..>1171
                     /locus_tag="VE844_06595"
     CDS             520..>1171
                     /locus_tag="VE844_06595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012917965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HZC01026.1"
                     /translation="MKYSKTELAALLTIDQFPRSASYDPEWVLDNLMGPNALWLTEAL
                     SQVMALTPGMRVLDMGCGRAISSIFLAKEFGLQVWATDFWIDASDNWQRVSAAGVTHQ
                     VFPIHAEAHALPFADGFFDALLSLDAYHYFGTDDLYLGYYSRFVRPGGQIGIVVPGLQ
                     REFTDGLPEHLIPYWVWECWSFHSPQWWRSHWEKTGQVEVTRADLIPDGWKHWLKWQ"
BASE COUNT          257 a          329 c          338 g          247 t
ORIGIN      
        1 tctgcggagt tcgagatcca gaagaccatc ggtaggtttg ccaacagctt cgatttgaag
       61 gactgggagc tgatgaagtc ggtattgtgc gacaaggtaa tcgtcgacta ctctgatctc
      121 cgtggcgatc ctgcgcaaga agtcgattca gacacctatg tccaaagccg gaaggaggca
      181 ctggcgaacc ttcatacgca ccacctcatc ggcaacttcg agaccgagtt ttcacagaac
      241 tccgccaagg taagagccag cagcaccatc tttcgcaggt ctgaggatcg agtatttaat
      301 acgcatgcca tctacgaatt tggcttgata aagaccgtag ggacgggctg gttaatcgac
      361 agtattaagc agtcagtgct gtggaatgag ggtgacagca cggtccacaa ggcggcaatc
      421 ggtacagctc acaagtcgct caaccggacg ccagacaacc ctggtgaagt cgaatgttag
      481 gtgcgcataa gtccacctac tctcctgtga agggcagcga tgaaatatag caaaacagag
      541 cttgcggcac tgctgaccat cgaccaattc ccccgctcag catcctatga ccctgagtgg
      601 gtgctcgaca atctgatggg gccgaatgcg ttgtggttga ccgaggcgtt gagccaggtg
      661 atggccctca cgcccgggat gcgtgtgctt gacatgggct gtggacgggc catcagctcc
      721 attttcctcg ccaaggaatt cggcctgcag gtctgggcga ccgacttttg gatcgatgcc
      781 agcgacaatt ggcaacgtgt atccgcggcc ggggtcacgc atcaggtctt tcccattcac
      841 gccgaggcac acgcgctccc cttcgccgac ggcttctttg acgccttact cagtctggac
      901 gcgtaccact attttggcac cgatgacctc tacctggggt actactcccg gttcgtccgc
      961 cccggggggc agatcggcat cgtcgtcccc ggcctgcagc gtgaattcac ggacggcctc
     1021 cctgaacacc tcatcccgta ctgggtgtgg gagtgttgga gtttccatag ccctcagtgg
     1081 tggcgaagcc attgggagaa aaccggccaa gtcgaggtga cgcgcgccga cctgatccct
     1141 gatggctgga agcactggct gaaatggcaa g
//
LOCUS       DASQSL010000639         2148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_85358, whole genome shotgun sequence.
ACCESSION   DASQSL010000639 DASQSL010000000
VERSION     DASQSL010000639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85358"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            16..>2148
                     /locus_tag="VE844_06600"
     CDS             16..>2148
                     /locus_tag="VE844_06600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011629864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HZC01027.1"
                     /translation="MAALSILLLFFLGAWVLAFIKAPLWTWTVATGVGLTILTLGGYL
                     APGLPQFVWVLWLVVALLNVSVVRQQLLMALLLGFYRRHLPTMSATEREALEAGTVWW
                     EAELFSGHPNWERLLDLPSPRLSEKEQSFLDGPVEALCQMLNDWEITYKRRDLPPKVW
                     EFIKSKGFLGMIIPERYGGLGFSAQAHSAVIAKISSRSGSAAVTVMVPNSLGPAELLL
                     HYGTETQKNYYLPRLADGRELPCFALTNPFAGSDASSIPDRGVVCYGEYAGKQVLGMR
                     VTWEKRYITLAPIATVLGLAFQLHDPEHLLGDKEYIGITLALIPTNHPGVEIGRRHYP
                     ARQAFQNGPTTGQNVFIPMDMVIGGHERLGQGWRMLMERLAVGRSISLPALASAIIKF
                     CARTTGAYARVRKQFKVPIGKFEGVEEALARIAGAAYAVEAARRVTACALDQGHEPAV
                     ISALLKYQSTERQRQVVNDAMDVHGGRTICEGPRNYLSNSYLAVPVVITVEGANILTR
                     SLIVFGQGVIRCHPWLLKEIEAAQTADRKQGLSLFDTALCGHIAHLVNNLGQALWHNL
                     TLGRFVPVPAGNPLNRWYQQLGRVSVSFALVADAALLLLGGELKRREKLSGRFADLLG
                     EMYFMSCVLKRFEDEGRPAQDLPLVEWVCHNALYTIQYQLAGILYNLPSKPAAWLLRR
                     VVFPLGLNQRPASDQLGHAVASILLEPSE"
BASE COUNT          406 a          578 c          636 g          528 t
ORIGIN      
        1 cttggagaat aagtaatggc tgcattgagt atcctattat tattttttct aggggcttgg
       61 gttttggctt ttattaaagc tccgctatgg acttggacag tagccactgg ggttggttta
      121 acgatcttga cgctaggcgg atatctggcg cccgggctac cccaatttgt ctgggtccta
      181 tggttggtag tggccctgct caatgtatcc gtcgtgcggc agcagctatt gatggcgctt
      241 ctgctcggct tctatcggcg ccatttgccg acgatgtcgg ccaccgagcg agaggccctg
      301 gaggccggca ccgtatggtg ggaagcggag ctcttttcgg gccaccccaa ctgggagcga
      361 ttactcgatc ttccctcccc tcgcctttcg gagaaggaac agtcgtttct ggacggccct
      421 gtggaagcgc tttgccagat gctcaatgac tgggagatca cctataaacg gcgggatctg
      481 cccccaaagg tatgggaatt catcaaaagc aagggatttc tcgggatgat catccccgag
      541 cggtacggtg gcctcggctt ttcagcccag gcccattccg cggtgatcgc caagatctcc
      601 tcccgctcag gcagcgccgc cgtcacggtg atggtgccga attcattggg acctgccgag
      661 ctgttgctac actatggtac cgaaacccag aagaattact atctgccgcg gctggccgat
      721 ggccgggagc tcccctgttt tgccctgacc aatccctttg cgggttccga cgcctcgtct
      781 atccccgatc ggggggtggt ttgctatggt gaatatgcgg gtaaacaggt gttggggatg
      841 cgggtgacct gggagaagcg ctatattacc ctggctccga tcgcgacggt cttggggctt
      901 gcgtttcagc tccatgatcc cgagcatctg ttaggggaca aagaatatat cgggatcacc
      961 ttagccctga tccccacgaa ccatcccggt gtagagatcg gccgccgcca ctatcctgcc
     1021 cggcaggcct ttcagaatgg cccaaccaca ggtcaaaacg tatttattcc catggacatg
     1081 gtgatcggcg ggcatgaacg gctcgggcag ggctggcgga tgctgatgga acgcttagcg
     1141 gtaggccggt ccatctcttt gcctgccttg gcttcggcta taatcaagtt ctgcgcgaga
     1201 actactggag cgtatgcacg tgtgcgtaaa caattcaagg ttcccatagg caagttcgag
     1261 ggtgtggagg aagccttggc acggatcgca ggggcggcct atgccgtcga agcagcccgc
     1321 cgtgtaaccg cctgtgcctt ggatcaagga cacgaacctg ccgtgatctc ggcattgctc
     1381 aagtatcaat ctaccgagcg tcagcgccag gtggtcaacg acgccatgga tgtgcatggc
     1441 ggccggacta tctgtgaagg tcctcgcaac tatctctcca atagttatct ggcggttccg
     1501 gtagttatta ccgttgaagg ggccaatatc ttaacacgca gtctgattgt cttcggccag
     1561 ggggtgatcc gttgtcatcc ttggctactg aaggagatag aggcagcgca gacggccgat
     1621 cgaaaacagg gtttgagctt atttgatact gccttgtgtg gccatatcgc gcacttggta
     1681 aataatctcg gccaggcgct ttggcataat ctgacattgg gccgttttgt cccggttcct
     1741 gctggtaacc ccttaaatcg gtggtaccag caactcgggc gtgtcagtgt ctcctttgcc
     1801 ttggtggccg atgcggcgct gctgcttttg ggcggtgagc ttaaacggcg tgagaagctt
     1861 tcgggacgtt tcgctgatct cttaggtgag atgtatttta tgagctgtgt gctcaagcgc
     1921 ttcgaggatg aagggcggcc ggctcaggac ctgcctttgg tggagtgggt atgccacaat
     1981 gccctctata caattcaata ccaactggcc ggcatccttt ataatcttcc ttctaagccg
     2041 gccgcttggc tactgcggcg ggtggtattc ccgctgggct taaaccagcg cccggccagc
     2101 gatcagctgg gccatgccgt ggcctcgatc ctcctggaac cctccgag
//
LOCUS       DASQSL010000640         1154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_73555, whole genome shotgun sequence.
ACCESSION   DASQSL010000640 DASQSL010000000
VERSION     DASQSL010000640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73555"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..312
                     /locus_tag="VE844_06605"
     CDS             <1..312
                     /locus_tag="VE844_06605"
                     /inference="COORDINATES: protein motif:HMM:NF013508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HZC01028.1"
                     /translation="QPLTITVTVTNNSVPQHVGLKDFFPHEMELVSVTPSQGSCGSGH
                     RHNAVECALGELHSGGSATVEIVLLPTVPGTSTNRALGGGKHSPENPDEATITVKPAA
                     G"
     gene            596..>1154
                     /locus_tag="VE844_06610"
     CDS             596..>1154
                     /locus_tag="VE844_06610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01029.1"
                     /translation="MKKHQSSSKRLLLIAAAVVAILVVIAAPVLAATNEDRRAADAFA
                     HLLGLNDAEALAEYLGLENEENEPCGPACSYYADNFAEAIGFGSAEELAEELGLEDSE
                     EQSAEDELAQILYDSENLRQLATAVGFDGPDALAEELQVPRSELAQALRDRSHLEALA
                     ELEELAEFEGFDENEFPQLLQAYSDD"
BASE COUNT          271 a          307 c          346 g          230 t
ORIGIN      
        1 cagccgttaa ccataaccgt cacggtaacc aacaactccg tcccccaaca cgtgggactc
       61 aaggacttct tcccgcacga gatggagcta gtctcggtga cgcccagcca ggggagctgc
      121 ggttccggtc accgtcacaa cgccgtcgag tgcgccttgg gcgagctgca tagcgggggc
      181 tcagccacgg ttgagatcgt cttgctccct acggttccgg gaacctcgac gaacagggca
      241 ctcggtggag ggaagcactc gcccgagaac ccagacgagg cgaccatcac ggtgaagccg
      301 gcggcagggt agaccggagc tcgctagcct aagctttgct tttgagtagc ccgaacccta
      361 cttggggtca cctcgaatca tcctttaggg cggcccgaat catcctttag gaggatgttg
      421 ctttcagtag caaggagcga taatttgctc agtattgtta agacccaaag aaggaggtaa
      481 gtagtttgaa gaagtttgac gacgaactga ggctctgggc tcagagcgtt gcacacgttt
      541 agccgacatt tcagtgggta acatccgcgc gagaatgata aaggagggat agaagttgaa
      601 gaaacatcag tctagttcaa agagattgtt gctgatagca gcagcggtgg tggcgatcct
      661 ggtagtgatt gccgctcccg ttctggcggc aactaacgaa gataggaggg cagccgatgc
      721 ctttgcccac ctactaggcc ttaacgatgc cgaagcgctt gctgagtatt tgggcttgga
      781 gaatgaggag aacgagcctt gtggccccgc atgctcctac tacgctgaca acttcgccga
      841 agccataggc tttggtagcg ccgaagaact tgccgaggag ttgggcctgg aggacagcga
      901 ggaacagagc gccgaggacg agcttgccca gatcctctat gactctgaga acctgagaca
      961 gctcgccacg gcagtaggct tcgatggccc cgatgcgctt gccgaggaac tgcaggtacc
     1021 aaggagcgag cttgcccaag ctcttcgaga ccgaagccac ctagaggccc ttgctgagtt
     1081 ggaggagcta gcagagtttg aaggcttcga tgagaacgag tttccccaac ttcttcaagc
     1141 ctactctgat gacc
//
LOCUS       DASQSL010000641         1199 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_142134, whole genome shotgun sequence.
ACCESSION   DASQSL010000641 DASQSL010000000
VERSION     DASQSL010000641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142134"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..913)
                     /locus_tag="VE844_06615"
     CDS             complement(<1..913)
                     /locus_tag="VE844_06615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020161161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6513 domain-containing protein"
                     /protein_id="HZC01030.1"
                     /translation="MAEHILFLTGKLAGKSLKQVLESMQPAGFTYEIVNIGLSVAALM
                     TAEMIHRRLHDPRGADRILVPGLCTGDLEIPAQRLGVPIVRGPKDLKDLPAFFGQGGK
                     PPDLSRCDIRIFAEIVEAPYMDVEAILHQASLYKADGADVIDVGCIPGVAFPHLHETV
                     VALIEHGYQVSIDSLEPEDLVCGSKAGAQYLLSLKESTLWIAEEVESTPVLIPEQPGD
                     MASLYRAIEAMQRENRSFIADPILDPIHFGFTASIGRYQELRHRYPAIEIMLGTGNLS
                     ELTDADTSGMHALMAGIMSELRITHLLT"
BASE COUNT          277 a          342 c          322 g          258 t
ORIGIN      
        1 tggtcaagag atgggtgatg cgcaattccg acatgatccc ggccatcagc gcatgcatgc
       61 ctgaggtatc ggcatcggtc agctctgaga gattccccgt tcccagcatg atctcgatcg
      121 cggggtagcg gtggcgcaat tcctggtaac gcccgatcga ggcggtaaag ccgaaatgaa
      181 tagggtccag gataggatca gcgataaagc tcctgttttc cctctgcatc gcctcaatgg
      241 cccgatacaa ggacgccata tccccgggct gctcaggtat gagcaccggc gtggactcga
      301 cctcctcggc gatccacagg gtactctcct tgaggctcaa gagatactgc gccccggcct
      361 tgctgccaca cacgaggtcc tcaggctcca aagaatcgat actgacctga tacccgtgct
      421 cgatcaaagc taccacggtt tcgtgtaagt gcgggaaagc cacgcccggg atacaaccga
      481 catcgatcac atcggcccca tcggccttgt atagggaggc ctgatgcaga atagcctcga
      541 catccatgta gggggcctcg acgatctcgg caaagatgcg gatatcgcag cggctgagat
      601 caggcggctt accgccttgc ccaaagaagg ccggcaagtc cttaagatcc ttcggacccc
      661 gcacgatggg gaccccaagc ctttgggccg ggatttccag atccccggta caaagccccg
      721 gcaccaggat gcgatcggcg ccgcgcggat cgtgcaggcg gcgatggatc atctcggctg
      781 tcatcaacgc ggccacgctg agaccgatat tcactatctc ataggtaaag ccggccggct
      841 gcatcgattc cagcacttgc ttgaggcttt tccccgcgag ttttccagtc aaaaataaga
      901 tatgttcggc cacgagatcc ttggttatcc agtctatgat gacggtgagt tgggaacggc
      961 aggccgctct aatagctcct gctcatgagg gcgcacagtg aggaattggc agtgtgagtt
     1021 cacccgcgga acattaatag aacccggtta gctcgtcaaa tcacccacca cttctacttc
     1081 ttgatcatgg gcgtcagcaa gtagatacag gggtattggt acctatgacc tgaattcaaa
     1141 ctttcaaaaa atcatgtgaa atttttcaca ttttttgtga accatcttat cgtccgatc
//
LOCUS       DASQSL010000642         1000 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_142141, whole genome shotgun sequence.
ACCESSION   DASQSL010000642 DASQSL010000000
VERSION     DASQSL010000642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142141"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(93..>1000)
                     /locus_tag="VE844_06620"
     CDS             complement(93..>1000)
                     /locus_tag="VE844_06620"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HZC01031.1"
                     /translation="SVKRSSSLGFLIASYNRPAKRETGSFSAWVTSTGQRMRRGPLGA
                     ALRCHDRSLAGVHDACGRIVAFPQEDQRIHDGLWPDDTSRIRHHIAAVSFHTNMDFSR
                     ECARIEKHEAERRTHMRKLWVKAWITLDGVFDADTMDYWWQNTNSPERMRYITEEYAN
                     GDAYLLGRVTYEMLWPGWSQQTTGDGPGPILNRMHKYVVSTTLSKAPWKESTIISGNV
                     VEEIAKLKQQPGKDIIIDGSARLVQSLMGTDLIDEYRFLVQPFIMGRGRRFFPDGTPP
                     TKLRLVESTALSFGSLALVYQPDKK"
BASE COUNT          189 a          306 c          275 g          230 t
ORIGIN      
        1 tgggtacgtc ggcaccccgg ccggcttccg ctcattgtgt ctgggcacaa accgcgccaa
       61 gacctcctgg gtcttgccga ctttcgatgc ggttattttt tgtctggctg gtagacaaga
      121 gcaagggagc caaaactgag agctgtgctt tcgacaagcc tcagcttcgt cggaggcgtc
      181 ccgtccggga aaaaccgcct tcccctgccc atgatgaagg gctggactaa gaaccgatac
      241 tcatcgatca gatccgttcc catcagcgat tggaccagcc tcgcgctgcc atcgataatg
      301 atgtctttgc ccggctgctg cttcagtttg gcgatttctt ccaccacatt ccctgagatg
      361 atggtggatt ctttccaggg agctttcgag agcgtggtcg agaccacata tttgtgcatc
      421 cggttgagga tcggcccggg accatcgccg gtcgtctgtt gggaccagcc cggccagagc
      481 atttcgtagg tgacccgtcc caggaggtac gcatcgccgt tcgcgtactc ctccgtaatg
      541 tagcgcattc tctcggggct atttgtgttt tgccaccagt aatccatcgt atctgcgtca
      601 aagacaccat ccagggtgat ccacgctttt acccagagct ttcgcatgtg agttctcctt
      661 tccgcttcat gcttctctat gcgcgcacac tcgcgcgaga aatccatatt agtatgaaac
      721 gacacggctg cgatgtggtg acgaatccgg gatgtatcat cgggccagag accgtcgtgt
      781 atccgctggt cctcctgcgg aaaggctacg atcctgccgc aagcatcgtg aacgccggcg
      841 agcgaccggt cgtgacacct cagcgccgcc cctagtgggc cacggcgcat ccgctgtccc
      901 gtgctcgtga cccaggcgga gaacgacccc gtctcccgct ttgccgggcg gttgtacgac
      961 gcgatgagaa accctaagga actactccgc ttcaccgaag
//
LOCUS       DASQSL010000643         1136 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_30133, whole genome shotgun sequence.
ACCESSION   DASQSL010000643 DASQSL010000000
VERSION     DASQSL010000643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1136
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30133"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(136..>1136)
                     /locus_tag="VE844_06625"
     CDS             complement(136..>1136)
                     /locus_tag="VE844_06625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007146290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZC01032.1"
                     /translation="GALLLPTLALTFGGEDGWRYAIGSTGAIALVYAWIYYLGARDTP
                     EGSTYFKPNKHGGLEVTSRGDLFCYFIMNIPLYVALGMLASKLTGLGLLSAGAVKLID
                     GALVSLFVYQSYCIYRVNAKIFVQPTPRLYRYKFKQVAILSLAYFVTFGSELAVFSML
                     PLFFMDTFKLSQVAAGMVAAPFGLVVLFMRPLGGWVSDRFGRKRTLVTVMIGLACGYA
                     LMSQISATWPLPLAVAACITCALFVHLGTGSVFAIVPLIQRRLTGQIAGMAGAYGNVG
                     GVMFLTVLAAVEPHTFFLTIAGTAVVVLGAVLCLDEPKGTIAEVLPDGTVQLIEVS"
BASE COUNT          264 a          349 c          331 g          192 t
ORIGIN      
        1 ccgcaatacc tttggtcttg agctgccgcg agtggggcag ccgcaggcca tgaaagtctt
       61 cattcgtggg cttctgccct tggtctgaga actgaccggc actgacttcg agttgggcac
      121 ccatcaggcg cggattcagc tcacctcgat caattgcacc gttccatcag gcagcacctc
      181 ggctatcgtg cccttcggtt catcgaggca caggacggcg cccaagacca ctacggcggt
      241 gcccgcaatg gtgagaaaga aggtgtgcgg ctcgactgct gcgagcacgg tgagaaacat
      301 cacgcctcct acattaccat aggccccggc catccctgcg atctgaccgg tgagccgccg
      361 ctggatgagc ggcacgatag cgaacacgct gccggtgcca agatgcacaa acagcgcaca
      421 ggtgatacac gcggcgactg cgagcggcag cggccaggtg gcgcttatct ggctcatgag
      481 ggcataaccg caagcaagcc cgatcatgac ggtcacgagc gtgcgcttgc ggccaaagcg
      541 gtcgctcacc caccccccga gcggccgcat gaacagcacg accagtccaa agggggccgc
      601 gaccatacct gctgccacct gggagagctt gaaggtatcc ataaagaaga ggggcagcat
      661 ggagaacacc gcgagctcag aaccgaaggt cacgaagtag gcgaggctca agatcgccac
      721 ttgcttgaat ttgtaacggt acaacctcgg tgtcggttgc acaaagatct tcgcattcac
      781 ccggtagatg cagtagctct ggtacacaaa gagactcacc agagctccat cgataagttt
      841 gaccgcccca gccgacaaga gcccgagccc cgtgagtttg ctcgcaagca taccgagggc
      901 gacataaagc ggtatgttca tgatgaaata acagaaaaga tcaccccggc tcgtgacctc
      961 cagcccaccg tgcttgttgg gcttgaaata ggtcgagcct tcgggggtat cgcgcgcacc
     1021 caggtaataa atccacgcat agaccagggc aatcgcgccc gtcgatccga tggcgtaacg
     1081 ccatccgtcc tcgccaccga atgtgagcgc cagcgtgggc agtagcagcg ctccgg
//
LOCUS       DASQSL010000644         1600 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_73562, whole genome shotgun sequence.
ACCESSION   DASQSL010000644 DASQSL010000000
VERSION     DASQSL010000644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73562"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(100..1467)
                     /locus_tag="VE844_06630"
     CDS             complement(100..1467)
                     /locus_tag="VE844_06630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007920573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01033.1"
                     /translation="MRTLPPKMVQALAPFAPLFSKRVWQHAQLLLIGAILAPGRRTVS
                     SALRAMGLDQYKQFHRYHRVLSRARWSSVEASRILLGVLLEAFVGEDRLIVGIDETLE
                     RRYGRKISARGVYRDPVRSTHEEFVKSSGLRWVCVMLLVEVPWASRVWALPFLSALAP
                     SERYAAKRGERHKKITEWAWQLLLVLRRWHPQREIVAVADRAYASLKLLDQCRKLSNP
                     ITFITRLRLDAALYEPAPPRRPGQIGRPRLKGERLPNLSEVAKDPKTIWKSTKIANWY
                     GSGERTVEIASQTAVWYSTGLFAVPVRWVLIRDPEGGFKTQALLCTDLDADPEEILRW
                     FMMRWQLEVTFQEMRRHLGFETQRQWSDMAIQRTTPALFGLFSLVTLFAHRQMKQAAG
                     TLRRQTAWYHKAHPTFADALALVRKELWSQEERTFYGSPSSTDTVKVPRAFVERLTEA
                     VCYAA"
BASE COUNT          327 a          497 c          474 g          302 t
ORIGIN      
        1 agcggctcgc tcggaacatg ggagtcgctc aacaggaacg agcatgcagc cgtctaaccc
       61 ctttattcac ccaagtgcgt ggagctcgac tttagccatt cacgctgcgt agcaaaccgc
      121 ttcggtgagg cgttccacaa aggcccttgg gactttcacc gtgtcggtcg atgaaggcga
      181 cccgtaaaaa gtccgctcct cctgggacca caactcttta cgcaccaacg caagcgcatc
      241 ggcgaaggtc ggatgagcct tgtggtacca agccgtctga cgccgtaagg tgcccgctgc
      301 ctgcttcatc tggcgatggg cgaacaaggt gaccagcgag aacaaaccaa acagcgccgg
      361 tgtggtgcgc tgtattgcca tatccgacca ctgtctctgc gtctcgaatc ccaggtgcct
      421 gcgcatctcc tggaaggtca cctctagctg ccagcgcatc ataaaccaac gcaggatctc
      481 ctccggatcg gcatcgaggt ctgtgcacag cagggcctgg gttttgaacc ctccttcggg
      541 atcacggatc aggacccagc gcaccggcac ggcgaacagc ccagtggagt accaaacggc
      601 cgtctgagaa gcgatctcga ccgtgcgctc tccgctgccg taccagttgg cgatcttggt
      661 tgacttccaa atggttttcg ggtctttggc cacctcggaa aggttgggca agcgctcgcc
      721 cttgaggcgt ggtctcccta tctggcccgg gcgccgtggc ggagccggct cgtagagggc
      781 agcatccaag cgcaagcggg ttatgaaggt gatcggattg gagagcttgc ggcattggtc
      841 gagtagtttg agcgacgcgt aggctcgatc ggctacggcc acgatctccc gctgcgggtg
      901 ccaccgccta agtaccaaga gtagttgcca ggcccattcg gttatcttct tgtgccgttc
      961 accccgcttg gcagcgtagc gctcggaagg agccaaagcc gagaggaaag gcaaggccca
     1021 tacccgagaa gcccagggga cctccaccaa cagcatcacg catacccatc tgaggccgct
     1081 gctcttcacg aactcttcgt gggtggaacg caccggatca cggtagacgc ccctggctga
     1141 gatcttcctg ccgtagcgtc gctccagggt ctcgtcgatg ccgacgatga gacggtcttc
     1201 ccctacgaac gcctctagaa gcactcctaa caagatgcgg ctggcctcca cgctcgacca
     1261 gcgagcgcgg ctgagcaccc gatggtaacg gtggaactgc ttgtattggt ccaagcccat
     1321 cgcccgcaag gcagagctga ctgttcgccg acccggagcg aggatcgcgc cgatcaaaag
     1381 cagctgagca tgctgccaaa cgcgctttga gaagagtggc gcaaaggggg ccaacgcctg
     1441 taccatcttg ggcggtaggg tacgcacctt gagatcaccc ctctttggac ggactggtga
     1501 cgagcgtacc ctaccccttt cgctcccgaa tggctaaagt cgagctcctg aaggtagccg
     1561 agaaacctac taccggtggc gttcgggctg gccagcccag
//
LOCUS       DASQSL010000645         1102 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_182511, whole genome shotgun sequence.
ACCESSION   DASQSL010000645 DASQSL010000000
VERSION     DASQSL010000645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1102
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182511"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..216)
                     /locus_tag="VE844_06635"
     CDS             complement(<1..216)
                     /locus_tag="VE844_06635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01034.1"
                     /translation="MPSDLLFCLACGEVGSNYSYLLRALLSPWRPMRAGAHADGHTSW
                     LRNGITPAPSPVNAGSITTMPDVGADHI"
BASE COUNT          260 a          314 c          303 g          225 t
ORIGIN      
        1 aatatggtcc gcgccgacat caggcatcgt agtgatactg ccagcattga cgggcgacgg
       61 cgctggcgtg atcccgttcc gtagccagga cgtgtgtccg tcagcgtgag cgccggctcg
      121 catcggacgc cacggtgaca gcagcgcgcg aagcaggtac gaatagttcg agcccacctc
      181 cccacaggcc aaacaaaaca gcaggtcaga cggcatggcg aaccggttac tgacgaacca
      241 ttcctagacc acatatcgca ggcgaatcct gttgggatcc cgccgccacg gacgaaggtc
      301 gcagcgacga agcccggctc tggtggtctc atctttggtc tcattcgcgt gcattcgtct
      361 acgttcatag gcattcagat caatgcagcg atgcgggtca cggacgtcaa cggtattccc
      421 gaactgttat cccacctcct gaaaatcgga aggccgacgg ttcgaccccc ttggccaccg
      481 tacactacct gcacaaaagg taacttcacc agatgattgg aaaagttggg atgcgctcag
      541 tctgcacacc agtcctccct ctgatgactc agcccgactt aaccaacggt gatttctggg
      601 catatgcggc acacgggacg ccgcactcgg taaaacgcaa taggcccagc ttgcacaacg
      661 gtgactaact gagcggatct aacaagataa cgaccgccac ttatatacga agctcacaca
      721 aagtgaccag cacctctttt cggcagccta atgggttatt actttgcgcg gcagggaccc
      781 gtacattcac ctcgtggggt gcagcgagcg aggggcgctg gtgggcgggc cagaggttgg
      841 agaaattgcc agaagggttg ctgtccaact agcaagcatc gtcatcagta tacaggcgaa
      901 tcttcgccgg tacgtcgtgg tcatcaccaa ccctaacgca cccaggaaac ggtttattga
      961 actgagatga gggaaaatgg tcaacggcga cggatcctcg agtctttgcc tgggagcttc
     1021 ttttgatttc gatctgcata tgcatgaact gtgtcgatta atcgcgcgcc agagtttctg
     1081 tagattaccc gccgagcatg tg
//
LOCUS       DASQSL010000646         1118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_5310, whole genome shotgun sequence.
ACCESSION   DASQSL010000646 DASQSL010000000
VERSION     DASQSL010000646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1118
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5310"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..627
                     /locus_tag="VE844_06640"
     CDS             <1..627
                     /locus_tag="VE844_06640"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZC01035.1"
                     /translation="EVARWLKNHPRLRTIPLVAVTALAMVGDRDKVLAAGFDGYIAKP
                     ISPDTFVGEVEKFLQFEQGSTPLPSLQSTVKAAPLQSTGATILVVDNTPVNIALARSI
                     FEPCRYTVITATGISEGLSRARQTSPDLILSDVNMSGGTGYDFIKLVKADPQLHAVPF
                     IFITSTFVDASDQARGLALGAAKFILRPIEPRPLLAAIEDCLRAEKRE"
     gene            630..>1118
                     /locus_tag="VE844_06645"
     CDS             630..>1118
                     /locus_tag="VE844_06645"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZC01036.1"
                     /translation="MATIVVVDDRALNRKFLVTLLGYAGHRLLEASDGVEGLEIVRAQ
                     RPDPVIVDLVMPTMDGYDFVRQLRAEPAIAQTRVIFYTAAYLQAETYALARACGVHHI
                     ITKPAEPQVVLKSVTEALDLAVTLPQPLSPEEFHQEHLRVITDKLFKQVEALEREVAE
                     RKR"
BASE COUNT          224 a          352 c          317 g          225 t
ORIGIN      
        1 gaggtggccc gctggctcaa gaatcatccg cgcctgcgga cgattcccct tgtcgcggtc
       61 acggccctgg ccatggttgg tgaccgcgac aaggtactgg cggccggctt cgacgggtac
      121 atagccaaac ccatatctcc ggacacgttt gtgggtgaag tggagaagtt cctccagttt
      181 gagcagggct cgacgcctct cccgtccctg cagtcaactg tcaaggctgc gccgctgcag
      241 agcacgggtg cgaccatact cgtggtggac aatacgcctg tcaacatcgc acttgcacgc
      301 agtatattcg agccctgccg ctacaccgtg atcaccgcga cagggatcag tgaaggactc
      361 tcccgtgccc gccagacctc tcctgacctg attctatccg atgtgaacat gtcgggcgga
      421 accggctacg actttatcaa gctcgtcaaa gccgaccccc aattgcacgc ggttcccttc
      481 atcttcatca cctctacgtt cgtagatgcc agcgatcagg caaggggtct tgccctcggt
      541 gcggccaagt tcattttacg ccccattgag ccacgacctc tgctagccgc aatcgaggac
      601 tgcttacgag cggaaaagcg agaataagca tggccacgat tgtggtggtg gatgaccgtg
      661 ccctcaaccg caaattcctg gtgaccctgc tcggatacgc aggtcatcgt ctgctcgaag
      721 ccagtgacgg ggtggaggga ttggagatcg tgcgcgccca acggcctgac ccggtgatcg
      781 tggacctggt tatgcccact atggatggct acgacttcgt ccgccagttg cgtgccgagc
      841 ccgcgatcgc tcagacccga gtcatttttt ataccgccgc ctacctgcaa gctgagacgt
      901 atgcgctggc gcgggcctgc ggtgtgcacc atatcattac gaagcccgcc gagccacaag
      961 tggtgctgaa aagtgtcacc gaagctctgg acctggccgt gactcttcct cagcccctct
     1021 cgcccgaaga gtttcaccag gagcacctcc gtgtcatcac cgacaagctc ttcaaacagg
     1081 tggaagccct ggaacgagaa gtggccgagc gcaagcgg
//
LOCUS       DASQSL010000647         2151 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_155998, whole genome shotgun sequence.
ACCESSION   DASQSL010000647 DASQSL010000000
VERSION     DASQSL010000647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2151
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155998"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(93..443)
                     /locus_tag="VE844_06650"
     CDS             complement(93..443)
                     /locus_tag="VE844_06650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012499353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HZC01037.1"
                     /translation="MTDCLFCKMVAGVIKPDTVYEDQDILAFKDIHPRAPLHVLVVPK
                     IHIPTLNDLKPEHAELVGKLFLAAHAIAKQHGYAEMGYRTVLNCNADAGQSIFHIHLH
                     VLGGRAMGWPPFPS"
     gene            complement(481..1896)
                     /locus_tag="VE844_06655"
     CDS             complement(481..1896)
                     /locus_tag="VE844_06655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018952698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HZC01038.1"
                     /translation="MDLSNTLSGQGLARKGFINLIESFALVVSLWFAPYSEAALPWSV
                     GDQRLPSLAPMLGQVTPAVVNIATEGRVQMRRNPLLEDPFFRFFFDFPDQPLERKTQS
                     LGSGVIVDAERGLVITNNHVIANAVQIAVNLRDGRKLEAKLVGADPETDIAVIKVSPT
                     ERLIALSMADSNQLKVGDFVVAIGNPFGLGQTVTSGIVSALGRSGLGIEGYEDFIQTD
                     ASINPGNSGGALVDLNGRLVGINTAIFSQTGGNIGIGFAIPINMARQVMEQLVKHGEV
                     KRGFLGAQLQDLDPELAEAFGLSQHQGAVLVSVIAGSSAEKAGLKPGDVITAINGRPI
                     YTASAVRNEIGLLRVGEQVKLEILRNGKPMQITASVSGQTETAAHATDIRNRRLAGVT
                     AGDIPKGAPEYGHLEGVMVFKVERGSHAWRSGLRDGDIIISVNRVPVTDVKGFLKLVN
                     KLRSGILLQVQRGDMALFIMM"
BASE COUNT          486 a          632 c          539 g          494 t
ORIGIN      
        1 acagtcaatc actaaaagca gcccgagtaa tgcgcgtgtg ggtagttcca tggttgtggc
       61 tcctcactcc tcactcttca cccctgctgg agctagctgg gaaacggtgg ccagcccatg
      121 gcgcgtcccc cgagtacatg caagtgaata tgaaagatcg actgacctgc atcggcattg
      181 caatttaata cggtcctata gcccatttca gcatagccat gttgcttcgc gatcgcgtgg
      241 gcagctagaa atagcttacc cactaattcg gcatgttcgg gcttcagatc attcaaggtt
      301 gggatatgga tcttgggaac gacaaggaca tgtaagggcg cccgcggatg gatatcctta
      361 aacgccaata tgtcctgatc ttcataaacg gtatcgggct tgataacacc cgccaccatc
      421 ttacaaaaca gacaatcggt catgttgtcc tcacctctca aggaagactt aaggtacccg
      481 ctacatcatg ataaacaggg ccatatcgcc ccgttgcacc tgtaacagga tcccagatct
      541 cagtttgttg acaagtttaa gaaacccttt gacgtctgtg accgggacac ggtttaccga
      601 aatgatgata tcgccgtctc gaagcccgct tcgccaggca tggctgcccc gttccacctt
      661 aaaaaccata acgccctcta ggtggccata ctcgggcgcg cctttgggta tatccccagc
      721 cgtgacaccg gccaggcgcc ggtttcggat atccgtggcg tgagcggcgg tttcggtctg
      781 ccccgagacg ctggcagtga tctgcatagg cttgccgttg cgcaggattt cgagcttaac
      841 ctgttcgccc acacggagca acccaatctc atttctgacg gcactggctg tataaatagg
      901 cctcccattg atcgcggtga tcacatcgcc cggtttgaga cccgcctttt ccgccgatga
      961 gccggcgatg acactgacca atacggcgcc ttgatgctgg gataatccaa acgcctcggc
     1021 gagctccgga tccagatcct gcaattgagc ccccagaaaa ccacgcttta cctcgccatg
     1081 ctttaccaat tgctccatca cctgacgggc catgttaatg ggtatggcga aaccgatccc
     1141 aatatttcca ccggtttgag agaagatggc ggtgttgatc ccgaccaggc ggccgttgag
     1201 gtccaccagc gctcccccgg aatttccggg attaatcgag gcgtcggtct gaatgaaatc
     1261 ctcatagccc tctatgccaa gaccgctgcg tcccagcgca ctgacgatgc ctgaggtcac
     1321 cgtctggcca agtccgaagg gattacctat agccaccacg aaatcgccga ccttgagctg
     1381 attggaatcg gccatggaaa gggcaatcag ccgctcggtc ggggagacct taatcacggc
     1441 aatatccgtc tcagggtcgg cgcccaccag tttagcctcg agctttcggc catcgcggag
     1501 attgacggcg atctgaacgg cgttggcgat cacgtggttg ttggtgatca cgagcccccg
     1561 ctcggcatcc acgatcacgc ccgagccgag actttgggtt ttgcgctcga gcggttggtc
     1621 cggaaaatca aagaaaaacc tgaaaaaggg atcctcgagc aggggatttc gcctcatctg
     1681 gacacggccc tcagtggcaa tattcactac cgccggtgtg acctgcccca gcatcggtgc
     1741 tagactcggt aaccgctgat cccccacgct ccatggcagg gcggcctcgc tgtatggcgc
     1801 aaaccaaagg ctgactacca acgcgaagct ctcgatgagg ttaataaagc ccttccgtgc
     1861 caagccttgc cctgacaatg tgttgcttaa atccattcaa tcaaccccct acttttatac
     1921 agctgctctt acggtaccga ataaaggtat ctttgtcgat actgcctttg aagagacccc
     1981 tttttcgtgg ggacgcgtat gtttcccttc caaaaaagaa atcccgtgaa ctataaagct
     2041 tcacgggatt tctgcactga tttaagcgat tgagccgctt aactctcagg ttttacatca
     2101 tgtccatatc gccgcccatg ccggggcgtc ctcctggcat catcttttcc t
//
LOCUS       DASQSL010000648         1043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_142203, whole genome shotgun sequence.
ACCESSION   DASQSL010000648 DASQSL010000000
VERSION     DASQSL010000648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1043
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142203"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1043
                     /locus_tag="VE844_06660"
     rRNA            <1..>1043
                     /locus_tag="VE844_06660"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          257 a          268 c          342 g          176 t
ORIGIN      
        1 gagattcggg cgccgtgagg cgtaccacct ctcaccaaac tccgaatgcc accccgggca
       61 atctgggagt cagactgtgg gtgataagat ccatggtcaa gagggaaaca gcccagaccg
      121 ccagctaagg accctaagtg ctagctaagt gggaaacgat gttcgagcgc ctagacaacc
      181 aggaggttgg cttagaggca gccacccttg aaagagtgcg taacagctca ctggtcaagt
      241 gttcgagcgc ggaaaatgta acggggctca agctatccgc cgaagctacg ggtgtatatt
      301 tatatacgcg gtaggagagc gttcctatgc ctgcgaagca gcggggtaac ccagccgtgg
      361 atgcttcaga agtgagaatg ccggcgtgag taacgaaaga ggggtgagaa tcccctccac
      421 cgattgtcca aggtttcctg agcaacgttc ttcggctcag ggtcagtcgg gacctaaggc
      481 gaggccgaaa ggcgtagtcg atggccaacg ggttgatatt cccgtaccac gtcgcgtccg
      541 ttacgaccga tggggggacg aggaaggcta ggggaacccc gccgacggtt gagcgggggt
      601 aagcatgtag ccagggctcc cagggaaatc cgggggcccg ccacggtgag gtgcgatgcc
      661 agctggccgg aaggccggcg agtccctgaa gccatgcctc cgagaaaagc ctctagggag
      721 gacagttcgt gcccgtacca aaaccgacac aggtggacaa gtagagaata ctaaggtgat
      781 cgagataacc atcgttaagg aactcggcaa aattgccccg taacttcggg agaaggggcg
      841 ccccggtagg gtgaagtcct tcgcggacgg agcccgaggg ggccgcagtg aatcggtcca
      901 agcgactgtt taccaaaaac acaggtctct gctaagtcgc aagacgacgt ataggggctg
      961 acgcctgccc ggtgccggaa ggttacgtgg agaggttagc caccttcggg tggcgaagct
     1021 ttgaaactaa gccccggtaa acg
//
LOCUS       DASQSL010000649         1134 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_182558, whole genome shotgun sequence.
ACCESSION   DASQSL010000649 DASQSL010000000
VERSION     DASQSL010000649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1134
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182558"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(93..236)
                     /locus_tag="VE844_06665"
     CDS             complement(93..236)
                     /locus_tag="VE844_06665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01039.1"
                     /translation="MTEPAKPQTPVEAVLRILDAKQCRRHRWIALFSSVVVSVQMREG
                     CVP"
     gene            complement(269..>1134)
                     /locus_tag="VE844_06670"
     CDS             complement(269..>1134)
                     /locus_tag="VE844_06670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01040.1"
                     /translation="GISEHTLKSCLKKLREEQLIIYGGRQNYGGRMGFTARSLQRQII
                     LRGDRNRLSKKLQQIDYKALLFGETLEDAATFPLSSGDVDHLMGHRIDHQMAHQIDHR
                     FDTPMNHQTTTSRDQPFRSSSFKKELLQDLVLEGSFFDLNAYSLMPFLDRFNTSEEVQ
                     DFLDMVNACIAASKEGRGKPIQNPHGFLFAQLRAGYINPPEGYKSRRVLAQELRNRQL
                     EEELTTLQQLKAREEQLRFELFQAQLSEEDRNRLEREARAKVNPGLGLSISRQLEVHK
                     DAILRQWFEQR"
BASE COUNT          226 a          314 c          318 g          276 t
ORIGIN      
        1 aacggggctg gcatgggcag gcctcctgtc agccattcgg tgcgatgtcc gcgagccggc
       61 tagatgccgc cgcaatggct cgactgcggg tgtcacggca cgcacccttc cctcatttgc
      121 acgctgacga ccacactcga gaacagggcg atccaccggt gtcggcggca ctgcttggcg
      181 tctaagatac gcagcaccgc ctctacgggc gtctgcggct tagcaggctc ggtcatggtg
      241 cggtgcctcc tgctcagcgc agcggtctct atcgctgctc aaaccattgt ctgaggatag
      301 catctttgtg cacttcgagt tgacggctaa tactgaggcc aagaccgggg tttaccttcg
      361 cccgggcttc ccgttcaaga cggtttcgat cctcctcgga cagctgtgct tggaagagtt
      421 caaatcggag ttgctcttcg cgcgccttga gttgctgcaa tgtcgtcaac tcctcctcga
      481 gctggcggtt tcggagctcc tgggcgagga cccggcggct cttatagccc tccggggggt
      541 tgatgtagcc ggcacgcagc tgtgcgaaaa ggaatccgtg cggattctgg atcggtttcc
      601 ctcgcccctc ctttgatgcc gcgatgcagg cattaaccat gtctaggaag tcctgtacct
      661 cctccgaggt gttgaaccga tcgaggaaag gcatgaggga ataggcgttc agatcgaaaa
      721 aactcccttc aaggaccaaa tcctgtagta gctctttttt aaaactacta ctacgaaagg
      781 gttggtcacg agatgtagtc gtctggtgat tcatcggggt atcgaatcgg tgatcgattt
      841 ggtgagccat ttggtgatct attcgatggc ccattaggtg atcaacgtca ccagaagaga
      901 gaggaaaggt tgcggcatct tccagagtct cgccaaagag taaggccttg tagtcgatct
      961 gttggagctt tttcgataac ctgtttctgt ctcccctcag gataatctgc cgctgcaagg
     1021 atctcgcggt aaagcccatc cgcccgccat aattttgccg gccaccatag ataattaact
     1081 gctcctctcg caacttcttg aggcagctct taagcgtatg ctcagagatt ccag
//
LOCUS       DASQSL010000650         1458 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_142232, whole genome shotgun sequence.
ACCESSION   DASQSL010000650 DASQSL010000000
VERSION     DASQSL010000650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1458
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142232"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(171..>1458)
                     /locus_tag="VE844_06675"
     CDS             complement(171..>1458)
                     /locus_tag="VE844_06675"
                     /inference="COORDINATES: protein motif:HMM:NF033559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC01041.1"
                     /translation="SQYFWDQMDCVEMVALRAVEDDLTRTVVTELGIELDTLFYDTTN
                     FFTYIASTNDRSTLAQRGHSKQKRHDLRVFNLALLVCRAGQIPSCSCVYEGNRVDVTA
                     YPESLTHIRERLEALSLSLKDITLVYDKGNHSKSNQALVDEAPFGYVASLVPAHHPEL
                     LAIPVSHYRPLTGNRLGLIPGLRLTSEIWGKQRTVLLFISEQLRAGQRRGLQQHLAKR
                     VRELAEWQAQLAKPRSGPRTRASAQKRIEQLLTGQYLKQVLRVDYDPERQGAQRLQYR
                     IDEAALRRLETEVFGKRLLITDRHEWSDEEIVLAYRGQSHVEGTFRLLKDNEHLAVRP
                     QYHWTDQKVHVHFLCLLGLLLARVIEYEAHRLGYRQGLSGLLELLGTIRLAMVLQPAL
                     TQGKRPRCTWQLEQTDPDAWRLFCHLVPPKPPFVYT"
BASE COUNT          302 a          422 c          450 g          284 t
ORIGIN      
        1 ctatcgagat aaagggtgcg ccataatcac tgttccggta tggaaaccaa ctcatgccta
       61 tatattaccg cttgcctaag caagtccgac agactcctag cgcgagttta ctggatatgg
      121 cgtgcaattt tgcggtaact atttgtagca aaagaatttt cggtagggca tcacgtatac
      181 acaaacggcg gcttaggagg tacgagatga cagaacagac gccaagcgtc agggtcggtt
      241 tgctcaagct gccaagtgca acgagggcgt ttgccttggg tgagggcggg ttgcagcacc
      301 atggccaagc ggatagtgcc caatagctcc agtaacccgg acagcccctg gcgatagccg
      361 aggcgatggg cttcgtactc gatgacccgg gccaacagca agcccagcag gcagaggaaa
      421 tgcacgtgca ccttctggtc ggtccagtgg tactgaggcc gaacggcgag gtgctcgttg
      481 tccttaagca ggcgaaaggt gccctccaca tgactctggc cgcgataggc caacacgatt
      541 tcctcatccg accactcatg gcggtcggtg atcagcaggc gcttgccgaa gacctcggtc
      601 tccaggcgcc tcagggcggc ctcgtcgatt cggtactgca agcgctgggc gccctggcgc
      661 tcagggtcat agtccaccct cagcacctgc ttgaggtact ggccggtgag cagctgctcg
      721 atacgctttt gggctgaggc tcgggtgcgc ggtcccgagc ggggcttggc cagttgagct
      781 tgccactcgg ccagctctcg cacccgcttg gccaagtgct gctgcaggcc gcggcgctgg
      841 ccagcgcgga gctgctcgct gataaacaac agcaccgtgc gctgcttccc ccagatctcg
      901 gaggtcagcc gcagccctgg gatcagcccc aagcggttgc cggtgagcgg ccgatagtgg
      961 ctgaccggaa tcgccagcag ctccggatga tgggccggga ccaaggaagc cacataccca
     1021 aagggcgcct catcgaccaa ggcttggttg ctttttgagt gattgccctt gtcatagacc
     1081 agtgtgatgt ccttgagcga caacgacagc gcctccaggc gctcgcggat gtgcgtcagc
     1141 gactcggggt aggcggtgac atcgacccga ttgccttcat agacgcacga gcacgacggg
     1201 atctggccgg cccggcagac caacaacgcc agattaaaca cccgcagatc atggcgcttt
     1261 tgcttggaat gtcctcgttg cgccagggtg gaccggtcat tcgtggaagc gatataggtg
     1321 aagaagttgg tggtgtcgta aaacagggta tccagttcaa tgcccagttc ggtgaccacg
     1381 gtgcgggtca agtcgtcttc gaccgctcgc agcgcgacca tctccacaca gtccatctga
     1441 tcccagaagt attgggag
//
LOCUS       DASQSL010000651         1929 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_85464, whole genome shotgun sequence.
ACCESSION   DASQSL010000651 DASQSL010000000
VERSION     DASQSL010000651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1929)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1929)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1929
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85464"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(520..1632)
                     /locus_tag="VE844_06680"
     CDS             complement(520..1632)
                     /locus_tag="VE844_06680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015067164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZC01042.1"
                     /translation="MPQSTTLYVGLDVHQESIAVAYIANAHHAEVIYLGSIGTRQCDI
                     DRLIRQLQSKSKELVFVYEAGPCGYWLYRYLTKRGHVCWVVAPSLIPKKAGDRVKTNR
                     RDAIQLARLMRSGDLTPVHVPQVEDEAIRDLSRAREDVLHDLKTAKHRLKAFLLRHDI
                     RYTGRATWGPAHLRWLSEVVCPTPAQQIVFQEYVHAVTEHTERLQRLERELQEHIQTW
                     RLRPVVDALQALRGVQFTVAVTVIAELGDLARFDKPSQLMNYLGLTPSEYSTGDHRRQ
                     GAITKTGNAHARRALIEGAWAYRYPAKVSRHLQLRLEKLPQPIQAISWKAQVRLCKRY
                     RQLIARGNHANRVVVAIARELSAFMWAIAQQIPVTP"
     gene            1748..>1929
                     /locus_tag="VE844_06685"
     CDS             1748..>1929
                     /locus_tag="VE844_06685"
                     /inference="COORDINATES: protein motif:HMM:NF021524.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2254 family protein"
                     /protein_id="HZC01043.1"
                     /translation="MNVAFILGKECTLIQDIEFAVDQLVEVAVRALSPGTNDPFTAMR
                     CIDRLAEALCQLAERR"
BASE COUNT          362 a          519 c          618 g          430 t
ORIGIN      
        1 gatgtagcca cctcgctgga ctcgagtttc tttaagtagg ctggctaatt gttggtcacc
       61 ttcagttgag cttcaaattg gcgtggctga acgcgagtgt cattagatgc cacttcaagc
      121 gccaaagccg cgtgctgatc agtgggtgaa cttaacacgg actgcgggct aacccaggca
      181 agccagctga cagcccaagc tcgctcctcc tgcagctgat ttccagcgtt gatatgactt
      241 ccgttgtcaa gccgtggcag cagcgtttct tacgttatca tccgtctttt ctcctggtca
      301 tcggaaggga cggagccagt aatgacgacg gtggatcacg ctgatatccg tggattggct
      361 accaccttac ttgcgtccgt cgggtgccag cctcgatcta ggcccgaggg tttcttgcag
      421 cctcataacg ctgacgaggg ttacaccaca ccggggctgc gccccttcca atgagcaagt
      481 cggttacggg tagtgccggg tccattgatg cttcagtggc tagggagtca cagggatctg
      541 ttgcgcaatg gcccacataa aggcgctcag ttcccgggcg atggcgacca cgacacgatt
      601 ggcgtggttg ccgcgtgcga tcagttgtcg atagcgtttg cacagccgca cctgcgcctt
      661 ccaactgatg gcctggatgg gttggggcag cttttcgagc cgcaattgga ggtgccggct
      721 gaccttagcc ggatatcggt aggcccaggc accctcaatc agggcacggc gtgcgtgcgc
      781 gttgccggtt ttggtgatgg ctccttggcg gcggtggtct cccgtggagt attccgaggg
      841 tgtcagcccg aggtaattca tcagctggct gggcttgtcg aagcgtgcga ggtctcccaa
      901 ctccgcaatg acggtgaccg cgacagtgaa ctggacacca cggagggcct gcaaggcgtc
      961 aaccacaggc cgcaggcgcc aggtctgtat gtgctcttgg agttcccgtt cgaggcgctg
     1021 gaggcgttcg gtgtgttcag tgacggcgtg cacgtattcc tggaagacga tctgttgggc
     1081 cggtgtggga cagacgacct cactgagcca gcgcagatgg gctggccccc aggtggcgcg
     1141 gcccgtatag cggatgtcgt ggcgcaggag aaaggctttg aggcgatgct tggctgtctt
     1201 gagatcgtgc aggacatctt cacgggcccg actcaggtcg cggatggctt cgtcctcgac
     1261 ctggggcaca tggactgggg tgaggtcgcc cgagcgcatc aggcgggcca attggatagc
     1321 gtcacgacgg ttagttttga cccgatcgcc tgcctttttg gggatcagcg atggggcaac
     1381 gacccagcag acatgacctc ttttcgtgag atagcggtag agccaatacc cacacgggcc
     1441 agcttcatag acgaagacca gctctttact tttggactgc agctgccgga taagccggtc
     1501 gatgtcgcac tggcgcgtgc cgatggagcc cagatagatg acttcagcgt ggtgtgcgtt
     1561 agcaatgtat gcgaccgcga tggactcttg gtggacatcc agtccgacgt aaagggtggt
     1621 agattggggc atggctgacc tccgagttcg tgtgcatgct ttcgcatgct gtggcactgg
     1681 cttcaggcaa gctaacccac gatagaaccg gggggcagcc tacccatcgg aagtcatgat
     1741 gtctaagatg aatgtggcat tcatcctggg taaagaatgc accctgatcc aagacatcga
     1801 gttcgccgtg gatcaattgg tcgaggtggc ggtacgggct ctctctcccg gcaccaatga
     1861 cccgttcacg gccatgcgat gcattgatcg gctggcggag gcactctgtc agttggctga
     1921 gcgcaggtt
//
LOCUS       DASQSL010000652         1199 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_142246, whole genome shotgun sequence.
ACCESSION   DASQSL010000652 DASQSL010000000
VERSION     DASQSL010000652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142246"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            233..451
                     /locus_tag="VE844_06690"
                     /pseudo
     CDS             233..451
                     /locus_tag="VE844_06690"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
     gene            485..910
                     /locus_tag="VE844_06695"
     CDS             485..910
                     /locus_tag="VE844_06695"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HZC01044.1"
                     /translation="MFVSPEVATKLASRISEEELTNRELEILTLLAEGKSNKLIAREL
                     NISEGTVKTHVKSILEKLDATSRTEAVAVAARTDHALITDHTCLKTIGPLSKGVGIAL
                     PQEGDRSPALVLFPYPTFTGYLLAAPTAILPTVPKYSSA"
     gene            1013..>1199
                     /locus_tag="VE844_06700"
     CDS             1013..>1199
                     /locus_tag="VE844_06700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01045.1"
                     /translation="MFELVLKRPLPPVSQKLQPVSQKLRGRLLRHLVTPLVAAAVVFF
                     GLGSYWSIEPAVFDIREM"
BASE COUNT          278 a          324 c          327 g          270 t
ORIGIN      
        1 cacccaagca gaaactgcag ccagtaatag cagtggcagc gtgatcacgg ttaagtgcgg
       61 tgctaccatg tatcaggata acctgaaata tttggcgggc attattgcct tcactttggt
      121 gtatttcgct gcggcaaagt tcgggctgtg actggcttct ggtgttcaga ataacgtcac
      181 gcctggccgc ccgcggggat agccttggcc atgatcctat aacggccgcg aggcgctcga
      241 gcagtggcgg agacaccgcc cggatatcac tttaatggat ctgcgcatgc ctgagatgtc
      301 gggtgtagag gccattgacg caatccgtga agaagatgct aggaccttga ttatcatact
      361 cgcgacctac gatagtgatg aggatatcta ccatgggatg caagcgggcg ccagggctta
      421 catcctgaag gacgcgcacc gtgaggagct tttagagtgc atccggcgcg tctgtcgcgg
      481 ccagatgttt gtctcgcccg aggtcgccac gaagctggcc agccgcatca gtgaagaaga
      541 actcaccaac cgggaactcg aaatcctcac gctccttgcc gaaggcaaga gcaacaagct
      601 tattgcccgg gagttgaata tcagcgaagg aactgtcaag acccatgtca agagcatcct
      661 ggagaagttg gatgccacga gccggactga ggcggtagcg gtcgcggcgc ggactgatca
      721 cgctttgatc actgatcaca cctgcctgaa gactattggt cctctctcga aaggggtagg
      781 cattgcccta ccacaagagg gggatcgctc tcccgcttta gtcctgtttc catatccaac
      841 ttttaccgga taccttttgg ccgctccgac ggccatactt cctactgtac cgaagtactc
      901 atcggcttag cagagtatct gaacatattt tcaggatcgc gccgaagcca atcgatcttc
      961 ggcgcaggaa acactattgg atcaaacacc acaacacaac ggaggctacc gtatgtttga
     1021 gctcgtgctt aaaagaccac taccgccagt ttctcaaaaa ctgcagccag tttctcaaaa
     1081 acttcgcggc cgcctgttga ggcatctcgt taccccactc gtggcggccg ctgttgtctt
     1141 ttttggactg ggatcgtatt ggagcatcga accggccgtc tttgacatcc gggagatgg
//
LOCUS       DASQSL010000653         1152 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_85479, whole genome shotgun sequence.
ACCESSION   DASQSL010000653 DASQSL010000000
VERSION     DASQSL010000653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1152
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85479"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..661)
                     /locus_tag="VE844_06705"
     CDS             complement(<1..661)
                     /locus_tag="VE844_06705"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018232681.1"
                     /note="with component II, the glutamine amidotransferase,
                     catalyzes the formation of anthranilate from chorismate
                     and glutamine; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HZC01046.1"
                     /translation="MINVERFSRLAQEGYNRIPVMRVILADLDTPLSAYMKLARGGYS
                     YLFESVQGGEQWGRYSIIGLPARTVLRVRGHRITVERDGEIVEQTTSLDPLGWIAAFQ
                     QRFRVPWVEGLPRFTGGLVGYFGYDTVRYIEPKLGPGPQSDPLGCPDILLMVSEEVLV
                     FDNLSGKLYLIAHVDPSERDAYTCGPARLDELADRLFGSLASVVSVNPRQISEADFVS
                     GY"
     gene            complement(665..>1152)
                     /locus_tag="VE844_06710"
     CDS             complement(665..>1152)
                     /locus_tag="VE844_06710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008931353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HZC01047.1"
                     /translation="LTGDEGEPELRLFQQAFELFSAIYMENTSQRSRLYPGVRTGLDY
                     LLETRRKLGCITNKRGRFTEPLLKSLGIYDAFALVVSGDSLPKKKPDPLPLLHAAHVL
                     GVAPEDALMIGDSINDVEAARAAGFRIVCVRYGYNNGDNIEEAYPDGVVDSLAELPTY
                     I"
BASE COUNT          278 a          355 c          295 g          224 t
ORIGIN      
        1 tgtatcctga gacaaaatct gcctccgaga tctggcgtgg attcacggac accaccgaag
       61 ccaaactgcc gaataatcta tccgcaagct cgtccaaacg cgctggccca catgtgtaag
      121 catcacgctc cgaaggatcc acatgagcaa tcaaatacag tttgccgctc agattatcga
      181 atactaaaac ctcctcggag accatgagca ggatatccgg acagccaagc ggatcgcttt
      241 gcggtccggg ccctagcttc ggttctatgt aacggacggt gtcatagcca aaatacccga
      301 ccagaccccc cgtgaagcga ggcagcccct ccacccacgg gacccgaaaa cgctgttgga
      361 aagcggcgat ccatcccaag ggatcgaggc ttgtggtctg ctcgacgatc tccccgtccc
      421 gctccacggt gatccggtgc ccccgaacac ggagcacggt gcgggcgggc aacccgatga
      481 tggaataacg gccccactgc tcaccgccct ggaccgattc aaacagatag gaataccctc
      541 cccgcgcaag cttcatatag gcgctcaaag gtgtatcgag gtccgcgagg atgacccgca
      601 tcaccgggat ccggttataa ccctcttggg cgagacgtga gaagcgttcg acgtttatca
      661 tcgattagat ataggtaggc aattcggcca gggagtccac caccccatca gggtaggcct
      721 cttcgatatt atcgccatta ttatacccat agcgcacaca cacgatccta aagcctgccg
      781 cgcgtgccgc ctcgacatca ttgattgagt caccgatcat caaggcatcc tctggcgcca
      841 cacccaacac gtgcgccgca tgcagcaacg gcagcggatc cggttttttc ttcggcaagc
      901 tatcaccgct caccacgagg gcaaaagcgt cgtagatccc gagcgatttc aataagggct
      961 cggtaaatcg cccacgtttg ttggtaatgc agccgagttt ccggcgggtt tcaaggagat
     1021 aatcgagtcc ggtgcgtaca ccgggataaa gccggctgcg ctggcttgtg ttctccatat
     1081 agatcgcgga aaaaagttca aaggcctgtt gaaacagcct gagctccggc tccccctcat
     1141 caccggtcaa tg
//
LOCUS       DASQSL010000654         1757 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_112410, whole genome shotgun sequence.
ACCESSION   DASQSL010000654 DASQSL010000000
VERSION     DASQSL010000654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1757)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1757)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1757
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112410"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            243..482
                     /locus_tag="VE844_06715"
     CDS             243..482
                     /locus_tag="VE844_06715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01048.1"
                     /translation="MPHYVEKYFLNASREVGLKVEPRADGLWRIEHLLADLRFGGQGD
                     MAVALNPQGGKMGSPSGLVRKTAILAFQPSDLCLG"
     gene            complement(991..>1757)
                     /locus_tag="VE844_06720"
     CDS             complement(991..>1757)
                     /locus_tag="VE844_06720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01049.1"
                     /translation="QMKETSPRRYWSHSVLFLIGIIAIGSGTATALYSWLSLKPKIAA
                     MTGELRESLELADQTLTTVDKGDQLLSRSVEAMKSGGNLVALLPETFTQLKEVLQQAS
                     NTALFTGRAAKEAEEGLTGLALPDPQTEQSARALKSTARQMRELAGVVDKMGGASDVL
                     AADIRNLSEELSGIAPRLKSDAGLLASTRQRLQGLHQAVVYFDPPTMAMLSGFGISGL
                     YFVIGLVSLTLAFALRTPAPLRAEGEGNDERSRRVA"
BASE COUNT          394 a          510 c          490 g          363 t
ORIGIN      
        1 taacgaccgt ggcccagttg catgccgcct caaaccgttt acccgagaaa tacggcaact
       61 cctatatctg aagacaatac cattatagat gaggaaacgt tgtaaaccgt gaccaaattg
      121 aaaatatcaa tcccgacaaa ctcaaggaat acgagcaagc taccgggatt gcacttgtcc
      181 aggcccatat ggatttctct agctttcagc gtgctaacgt ggaggccgag gagctcaggc
      241 tcatgccgca ctacgtggaa aagtatttcc taaatgccag ccgcgaggta ggacttaagg
      301 tggaaccgag ggccgatggg ctttggcgca ttgagcattt actcgctgac ctgcgcttcg
      361 gtggccaggg tgacatggcg gtggccctca atccccaggg cggcaagatg ggatccccaa
      421 gcggcctggt tcgcaaaacc gccatcctgg ctttccagcc aagcgacctg tgccttgggt
      481 aagccctgac gctgcatgga ctccaaggcc cccgcataag gccggcactc cctggcacgt
      541 aggcccccaa ccaagctttg ccaaccaggg cgatctcggt actctttctg agtgtcgcat
      601 taagctgcac aatgggtagc gcatgcatcg gagcaacggg aaagttttcg gtcttcgagc
      661 cgacggtgga attgacattc ggtagaaagg atgcgcttgc ctttacgtca agactgagag
      721 cggaccggct cgggtactca gtaatgggat aggcgtccac cagagtcgca ccgactttct
      781 cgagccggac gccctgctga atctaaactt cgtcctcagc ccggagggaa ttcgagagtc
      841 caatcgtaat cccaagtaga atggaaatcc attttgccat cttgaacctc cgcacgaacc
      901 cctggcgatt tccggcaatc gcaatgcccg gtggggctac cgctccgaac aaaatcgctc
      961 gctcgagtct agaagcgaac aaaatggatg ctaggcaacc cgtctcgacc tctcgtcgtt
     1021 tccctcacct tcggcacgca agggcgcagg agtccgtagg gcgaaggcta gcgtaagaga
     1081 gaccagcccg ataacaaagt acaagccact gatgccgaag cccgatagca tcgccatggt
     1141 gggtggatcg aaataaacca cggcttgatg cagtccctga agacgctggc gcgtggacgc
     1201 gagtaggccc gcatcggact tcaaccgagg tgcgatgccc gagagctcct cggaaaggtt
     1261 tcggatgtcg gcggcgagca cgtcggaggc gccgcccatc ttatcgacga ctcccgcaag
     1321 ctctcgcatt tgtcgggcgg tgctctttag cgcccgggcg ctctgttcgg tctgtggatc
     1381 gggcagggcg agtccggtca acccttcctc cgcctccttc gccgctcttc cggtaaagag
     1441 ggcggtattc gaagcctgtt gcagtacctc tttcaattga gtgaacgttt ccggaagaag
     1501 agcaactagg ttccctcctg acttcatggc ttccaccgag cgcgacagga gctgatcgcc
     1561 tttgtccacc gtcgtcaacg tctgatcagc aagctccagg ctttcccgaa gctcgcccgt
     1621 catcgcggca attttcggtt tcagcgacaa ccaggagtag agggctgtgg cggttcccga
     1681 tccgatcgct ataatgccga tgaggaaaag aacgctgtga ctccagtatc tgcgcgggga
     1741 tgtctctttc atctgaa
//
LOCUS       DASQSL010000655         1469 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_182600, whole genome shotgun sequence.
ACCESSION   DASQSL010000655 DASQSL010000000
VERSION     DASQSL010000655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1469
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182600"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(32..1219)
                     /locus_tag="VE844_06725"
     CDS             complement(32..1219)
                     /locus_tag="VE844_06725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01050.1"
                     /translation="MLPIIRVPEILAKGMESFRKIFCRAEGFEHICRFITGLILSPNK
                     TLQGIYDLQVWEGEVPSRRAMHEAVFESGWDGAAFIEHHRAEVAHAYQGRGRPVILLD
                     WTLSHHERGPKIYAVTKSYDYVERRTALFQTVVTAGVSNREWIDGLEVVVQDPKDLKA
                     EAAYLKATAKESYEQMGEARERLVELLHYRIHQLQYRKRTEIAVEVVRQLEAEGQFPQ
                     AHYAFDKGVLTLELTRLIESRGKHWVSEVEVSRHIQWQGHWRRVDEVGAELRHHHPES
                     FRPVKVSCRNGEERVFFAFTKVVRLKRYGRKRLVIVHEQEDLTDAPRFLLTDALHWES
                     GRVIQSWSYALASEVFHEKGQAGMGLGVSSGTQGGSGHTPLPLELRSAVVGPTRTCRR
                     VEI"
     gene            complement(1253..>1469)
                     /locus_tag="VE844_06730"
     CDS             complement(1253..>1469)
                     /locus_tag="VE844_06730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01051.1"
                     /translation="VSTFGLKPLDRPELPQDVKSLRARMWTLATQLAQHNGLGECILP
                     CSNKGCGYLVGLHDLEGYREKWANGGR"
BASE COUNT          306 a          490 c          337 g          336 t
ORIGIN      
        1 ggttttcttc ccggcggcaa acgcgtatct ttcagatttc gactctgcgg caggtgcgcg
       61 ttggaccaac gactgcgcta cgcaactcaa gcggaagtgg cgtatgaccg cttcctcctt
      121 gcgtacctga gctgactcca agccccatac ctgcttggcc cttctcatga aagacctcgg
      181 aagcgagagc gtaactccag ctttgaatca cgcgcccgct ttcccaatgt aaggcatcgg
      241 taagcaaaaa acgcggggca tcggtcaagt cctcttgttc atgcacgatc accaggcgct
      301 tgcgcccata ccgcttcagc cgcactacct tggtgaaagc aaagaacacc ctctcctcgc
      361 cattgcggca gctcaccttc accggccgga agctttctgg gtggtggtgc cttaactcgg
      421 ctcccacttc atccacgcgc cgccagtgac cctgccactg gatatgccgc gagacttcta
      481 cttcactgac ccaatgctta ccccgacttt caatcaaacg cgtcaattcc agcgtcaaca
      541 cccccttatc aaaggcataa tgggcctgcg ggaactgacc ttcggcttcc aactggcgta
      601 cgacctccac cgcgatctcg gtccgtttgc ggtactgcag ttgatggatg cgatagtgca
      661 acaattccac caagcgctcc cgtgcctccc ccatctgttc atagctctct ttggctgtcg
      721 ctttcaaata ggccgcctcc gctttcaggt ccttcgggtc ttgaaccacg acctcaagcc
      781 catcgatcca ttcgcggttg gatacccccg ccgtcactac cgtctgaaac aaggccgttc
      841 gtcgctccac gtaatcgtaa ctcttggtga cggcataaat cttgggaccc cgctcgtgat
      901 gggaaagcgt ccaatcgagc aaaattaccg ggcgacctcg cccttgatag gcgtgagcca
      961 cttcggctcg gtgatgctca ataaaggcgg ccccgtccca ccctgactca aaaaccgctt
     1021 catgcatcgc ccgccggctc ggcacctccc cctcccatac ttgcagatca taaatccctt
     1081 ggagggtctt gttggggctg aggatcaagc ccgtaataaa ccggcagata tgttcaaacc
     1141 cttccgcacg acaaaagatc tttctaaagc tttccatccc cttggccagg atctccggca
     1201 cccgaataat cggcagcatg gctccaccct atctttttct atctcacccc tcttatcttc
     1261 ctccattcgc ccatttttcc ctataacctt ccaagtcgtg taggcccacc aaatacccgc
     1321 agcctttgtt cgagcaggga agaatgcact cgcctagacc attatgctgg gcaagctggg
     1381 tggccagtgt ccacatccgc gcgcgcaggc tcttcacatc ctggggtaat tcggggcggt
     1441 cgagcggctt caaaccgaac gtagatacg
//
LOCUS       DASQSL010000656         1655 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_182641, whole genome shotgun sequence.
ACCESSION   DASQSL010000656 DASQSL010000000
VERSION     DASQSL010000656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1655
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182641"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1195
                     /gene="der"
                     /locus_tag="VE844_06735"
     CDS             <1..1195
                     /gene="der"
                     /locus_tag="VE844_06735"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HZC01052.1"
                     /translation="KGLAELVTQQSLQAAREADAVVFLVDGQEGLTLQDEIIASRLRS
                     LDKPIQLAVNKTEGRDPAIAVAEFHTLGLGLPVPISSAHNQGLDTLIEDLFASLPTHS
                     TVGEDEAAGSEIGVKIAIIGRPNVGKSTLVNRMLGEERVLVYDEPGTTRDSIAIPFKR
                     DQRSYTLIDTAGIRRRSRITETIEKFSVIKTLQTLDKAEVAIVVIDAVGSITDQDTAL
                     IGMVLDSGRALVIAVNKWDGLPAEQRRQVKNDVDRKLRFVDFARLHYISALHGSGVGE
                     LFASIEEAHRSAFIEVSTATLTRILQQAVENFPPPLVRGRRIKLRYAHLGGHSPPSVV
                     IHGNQIESIPSSYRRYLERSFGEALALQGTPVRIAFKQGENPFKGKGNPLTQRQLAKR
                     KRLMR"
     gene            1310..>1655
                     /locus_tag="VE844_06740"
     CDS             1310..>1655
                     /locus_tag="VE844_06740"
                     /inference="COORDINATES: protein motif:HMM:NF013046.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01053.1"
                     /translation="MVLASNGGAVAAGLAALENGVAGSLSSGPHHARCGSEAGFCTFN
                     GLVIAASEALAAGVGSVLILDLDAHCSGGTASLIAGEPRIWQIDVSVSGYDSYSSSNR
                     IRLDIVGKSRDYL"
BASE COUNT          355 a          444 c          504 g          352 t
ORIGIN      
        1 aaagggcctc gcggagttgg tcacacagca atccctgcag gcggcccgag aggccgatgc
       61 ggttgttttc ttggttgatg gccaggaagg acttaccctt caggatgaaa tcatcgccag
      121 ccggttgcgg agcctcgata aacctataca gctggcagtc aataaaaccg aaggccgcga
      181 tccggcgatc gccgtggctg aattccatac gctcggactg ggtctgcctg ttcctatttc
      241 gagcgcgcat aatcagggct tggatacctt gatcgaggat ctgtttgcct ccttacccac
      301 tcactcgact gtgggcgaag atgaagcggc cggatccgag atcggcgtaa agatcgccat
      361 catcggcagg cccaatgtgg gcaaatcgac cctggtcaat cgcatgctag gcgaagagcg
      421 ggtcctggtt tacgacgagc caggcaccac ccgcgacagc attgccatcc cctttaagcg
      481 cgaccaacga tcctacacct tgatcgacac ggctgggatc aggcgccgct ctcggattac
      541 ggaaaccatt gagaagttta gcgtgatcaa gacgctgcaa acgcttgaca aagcggaggt
      601 cgcgattgtg gtgatcgatg cggtcggatc tattaccgac caggacactg ctctgatcgg
      661 catggttctc gatagtgggc gcgctttggt gatcgcggtg aataaatggg atgggctgcc
      721 cgccgagcag cggcgacagg tgaagaatga tgtcgaccgc aaacttcgct ttgtcgactt
      781 cgcccgccta cactacatct ctgcactcca tgggagcggg gtgggtgaac tgtttgcctc
      841 catcgaggag gcgcaccgtt cggccttcat cgaagtctca accgctacct taacccggat
      901 cctgcaacag gctgtggaga actttccgcc gcctttggtg agggggcggc ggatcaagct
      961 gcgctatgcg catctgggag gtcacagtcc accgagtgtg gtgatccatg gcaatcagat
     1021 cgagtcgatc ccgagttctt atcgccgtta tttggaaaga tctttcggtg aggccttagc
     1081 acttcaaggt acaccggtac ggatagcgtt caaacaaggg gagaatccct ttaaaggcaa
     1141 gggaaatccc ttgactcaaa ggcaactcgc caagcgtaag cggctcatgc gctagagaaa
     1201 atagaggaat aaaataccag tctgaccgct atttttcgca gcacagacag gacttcctcg
     1261 gggactggcc gagtcgcaag gcttctcatg ggatggtggg ctgtggccga tggtcttggc
     1321 gtccaacggt ggtgccgtcg ctgcgggact ggctgcgctt gagaatgggg tggccggctc
     1381 gctttccagt ggcccccacc acgcccgctg cggaagcgaa gcaggcttct gcacgttcaa
     1441 cggcttggtg atagcggcta gcgaagctct agcggctgga gtggggtcag tgctgatcct
     1501 tgatctggat gctcattgta gcgggggaac tgcctccctg atcgcaggcg agcctcggat
     1561 ctggcaaatt gacgtgtcgg tgagcggtta cgacagctat tcgagttcca accgaatccg
     1621 gctggacatc gtcgggaaga gtagggatta cctaa
//
LOCUS       DASQSL010000657         1537 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_85532, whole genome shotgun sequence.
ACCESSION   DASQSL010000657 DASQSL010000000
VERSION     DASQSL010000657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1537
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85532"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            241..1443
                     /locus_tag="VE844_06745"
     CDS             241..1443
                     /locus_tag="VE844_06745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018493107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent formate dehydrogenase"
                     /protein_id="HZC01054.1"
                     /translation="MAKIVCVLYDDPVGGYPKSYARDDIPRIERYPDGQTVPTPKKID
                     FKPGALLGSVSGELGLRKFLEEQGHTLVVTSDKDGPDSVLERELPEAEIVISQPFWPA
                     YLTAARIAKAPKLKLAITAGIGSDHVDLQAAIERGLTVAEVTYCNSISVSEHVVMMIL
                     SLVRNYIPSYQWVVNKGWNIADCVSRSYDLEGMEVGTVAAGRIGLAVLRRLKPFDVKL
                     HYTDRHRLPQDVEKELDLTYHPNVESLVRVCDVVTINCPLHPETEHMFNDQLISKMKR
                     GAYIVNTARGKICDRDAIARALESGQLAGYAGDVWFPQPPPKDHPWRTMPHHGMTPHT
                     SGTSLSAQARYAAGVREILECWFEGRPIRNEYLIVDKGKLAGAGAHSYSTGDATGGSE
                     EAARFKKG"
BASE COUNT          356 a          414 c          448 g          319 t
ORIGIN      
        1 tccatcttcc gtgatctcga tctccggtca cgcttcgata ccttgataag cactatctat
       61 tgagcaattc acccaaacga ttggactgac cacattcttg caccggaaaa tcttgtacac
      121 ccagctgctc aaggtatgtt ccgccgagat gaacaatagc ctctgagagg ctattgaatg
      181 gcaagggtgg gccgatgacg gcccacttta tcctctttta taaccatagg tgaaaaagaa
      241 atggctaaaa ttgtttgtgt gctttacgac gaccctgtag ggggctaccc gaaatcctat
      301 gcccgtgatg atattccaag gatcgaacgt tatcccgacg gccagacggt gccgacccca
      361 aagaagatcg atttcaagcc gggggcgctc ttgggcagtg tctccgggga actcggattg
      421 cggaaatttc ttgaggaaca gggacacacg ctggtcgtaa cctccgacaa agatggtccg
      481 gactccgttc tcgaaagaga gttgccggag gcggagatcg tgatctcgca gccgttctgg
      541 cctgcctatc tgacggcagc aaggatcgcc aaagcgccaa aactgaagtt ggcgattacc
      601 gcggggatcg gctcggatca cgtggatctt caggccgcga tcgagcgggg gctcacggtg
      661 gccgaagtca cctactgcaa cagcatcagc gtatccgagc acgtggtgat gatgatcctg
      721 tccctggtgc gcaattacat tccgtcctac cagtgggtcg tcaacaaggg ctggaatatc
      781 gccgactgtg tctcaaggtc ctacgatctg gaaggaatgg aagtgggaac ggtggccgcc
      841 ggacgcattg ggttggcggt tctaaggcgg ctgaagcctt ttgatgtcaa gctgcactac
      901 acagaccggc accggcttcc gcaggatgtc gaaaaggagc tggatctgac ctatcatccg
      961 aacgttgagt cgctggtgcg tgtctgcgat gtggtcacga tcaactgccc gctgcatccc
     1021 gaaacggaac acatgttcaa cgaccagctc atcagcaaga tgaagcgtgg cgcctatatc
     1081 gtcaacaccg cacgcggcaa gatctgtgac cgggacgcga tcgcacgggc gctggagagc
     1141 gggcagcttg ctggatacgc gggcgatgtc tggttcccgc agccgccacc gaaggatcac
     1201 ccgtggcgga cgatgccgca ccacggcatg acgccgcata cctcaggaac gagtctatcg
     1261 gcacaggcgc gctatgctgc cggggtgcgc gaaatactgg agtgctggtt cgagggtcgt
     1321 cccattcgca atgaatacct gattgtcgac aaagggaaac tggccggggc aggtgctcat
     1381 tcctacagca ccggcgacgc caccggtggc tctgaggaag cggcgcggtt caagaaagga
     1441 taaggcctct ggggagtttc gtaattcaaa gttatgaaag ctaacattat agttaagcct
     1501 atggaagacc gctttcttgt cacctgcccc tacagca
//
LOCUS       DASQSL010000658         1222 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_142306, whole genome shotgun sequence.
ACCESSION   DASQSL010000658 DASQSL010000000
VERSION     DASQSL010000658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1222
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142306"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            113..511
                     /gene="gcvH"
                     /locus_tag="VE844_06750"
     CDS             113..511
                     /gene="gcvH"
                     /locus_tag="VE844_06750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005958658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HZC01055.1"
                     /translation="MSQIPEDLRYTKSHEWARLLDDSSVQVGITDYAQHALGDMVYID
                     LPKLGNSYAAKAECAVVESVKSASDLYCPVAGEIVEVNEALNEHPEIVNQDPYGQGWI
                     FRLRPNDVKDLDKLLEAKAYAAEIAAEEEE"
     gene            526..1026
                     /gene="tpx"
                     /locus_tag="VE844_06755"
     CDS             526..1026
                     /gene="tpx"
                     /locus_tag="VE844_06755"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012970133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA];
                     GO_function: GO:0016684 - oxidoreductase activity, acting
                     on peroxide as acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HZC01056.1"
                     /translation="MATITLKGNPIHTNNELPAVGTKAPDFVLVDGDLNNVNLATYQG
                     KKKLLNIVPSLDTPVCALSTKRFNEAAKGRGDVVFLMISADLPFAMKRFCGAEGTANV
                     IPLSLMRSHKFAEDYGVLIEDGPLAGITARAVVVLDAGDKVIYTQLVPEIAQEPDYDK
                     ALAALL"
BASE COUNT          294 a          314 c          351 g          263 t
ORIGIN      
        1 cgaggaaagc ggttgaaggc cgcagtggtc aaaccgcctt ttgtgaggaa tgggcaatcg
       61 tgcctggctg gtttttaata gcatagtgta gaaattgcaa agagagaggg gaatgagtca
      121 gatacctgaa gatcttagat acaccaagag ccatgaatgg gcccggttac tcgatgatag
      181 cagtgtgcag gtcgggatca cggactatgc ccaacacgcc ttaggcgata tggtctatat
      241 cgacttgcct aagcttggga acagttatgc agcaaaggcc gaatgcgccg tggtcgaatc
      301 ggtgaaatca gcctccgatc tctattgccc cgtggccggt gagatcgtcg aggtgaacga
      361 ggccttgaac gagcaccccg agatcgtgaa tcaggacccc tatggccagg gctggatctt
      421 tcgcctgaga cccaacgatg tgaaggacct tgataaactc ctcgaggcta aagcgtatgc
      481 ggcagagatt gccgccgaag aggaagagta gaaaggagat aaacgatggc aaccatcacc
      541 ctcaaaggca acccaatcca caccaataat gagcttcctg ccgtggggac taaggccccc
      601 gattttgtat tggtggatgg cgatctcaat aacgtgaacc ttgccaccta ccagggcaag
      661 aagaagctgc tcaatatcgt gccgagtctt gatacgccgg tctgtgccct ctcgaccaag
      721 aggttcaacg aggcggcgaa ggggcgaggt gatgtggtct ttttgatgat ctcggcggat
      781 ctgccctttg ccatgaagcg cttctgcggg gcggaaggca ccgccaatgt tatccccctt
      841 tcgctgatgc gctcccacaa gtttgcggag gactatgggg tcctcattga agacggcccc
      901 ttagctggga tcaccgcccg cgctgtggta gtgctggatg ctggcgataa ggtgatctat
      961 acccaactcg tgcccgagat cgcacaagag cccgattacg ataaggccct ggcggcgctc
     1021 ttatagtcca cctttgctac acactttatc accgacaccc cctccctcac cctccccctt
     1081 ccagggggag gaaaggggtg gtgggggctg gcataaaatt cgcttaagcc ttcctcaggg
     1141 ggaggggatt attcccattt atccaaggtc taataaaggt ggctgaggct aatcagccga
     1201 gagaattcag cgtctgaatc tt
//
LOCUS       DASQSL010000659         3777 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_142341, whole genome shotgun sequence.
ACCESSION   DASQSL010000659 DASQSL010000000
VERSION     DASQSL010000659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3777
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142341"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            320..814
                     /locus_tag="VE844_06760"
     CDS             320..814
                     /locus_tag="VE844_06760"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017365510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HZC01057.1"
                     /translation="MSKPVIALVVAMDRQGVIGAKGKLPWHLPADLKHFRAITWGKPI
                     VMGRKTHESIGRLLPGRENIVVSRTLGFESPGCVVVRSVVEVLMHTREAPEVMVIGGA
                     ALYAETLPLAHRIYLTEVHAKFDGDTYFPPYNRAAWREQQRIDHPVDELNPYPYSFVL
                     LERP"
     gene            complement(972..2564)
                     /locus_tag="VE844_06765"
     CDS             complement(972..2564)
                     /locus_tag="VE844_06765"
                     /inference="COORDINATES: protein motif:HMM:NF014036.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HZC01058.1"
                     /translation="MPAKTLSPRFSIHAFLAIAAIVLPIVTLLPLGLLWLWQQDLLME
                     WLLVLAVFAGGSWLMLWILNRKSAVMLRDKPEVEPSPLWPEGSLPVWDRVTEIADRLD
                     PADYPLDHPTKLLELAQQTIEGVARHYYPASKNAPLEIAIPYLLVIIERVSQDLRKLL
                     DHIPFSHALTIHDLMRGHGLTSFARRCYDAYRWGSLAINPVGAVLRELRALTAHQILK
                     YPTEELKLWLLQSYVKKVGYYAIELYSGTLTLSDKPTTDYITRYSQKDLERSEEKPLE
                     EPLRLLVLGQVKSGKSSLVNALFGEMRAMTDVLPLTAGFTPYLLERDGVEQMLILDSA
                     GYAGPTEGQGLDKTEAEIVRSDLIVLVCSAISAARHPDRQLLQRILDLFQSHPELNAP
                     PILVILSHIDRLRPVREWAPPYNIVQPQRPKEQAIRKAMEATAEDLGVGLSDIIPVSL
                     QTGHGYNIEEGVIPAILVRLDRAQQVKYLRCLREQRREDYWNRLREQAWKAGRIVLDA
                     SARIAAETAKKLGDKITKRLRK"
     gene            complement(2579..>3777)
                     /locus_tag="VE844_06770"
     CDS             complement(2579..>3777)
                     /locus_tag="VE844_06770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019867711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HZC01059.1"
                     /translation="NTKDLRDALADAVFKPRISDEKLAERVEAIKRTLPIPVIWLLGK
                     AQSGKTSLIRALTGRDDTEIGNGFQPCTRTARLYDFPDTEQCFIRFLDTRGLGEVNYD
                     PTEDMQLFMQQAHLLMVVIKAMDHAQQAVLEALRAILKVHPEWPVIVVQTTLHEGYPS
                     PETPHLEPYPYAQLPWPETVPTDLARSLLKQREWFTGIEARFVAVDFTLPEDGYIPVN
                     YGIDALWAAIEVALPLGLRGMFQATEHWQPLRDIYAEAAHPHILAYAVLAGGSEVIPF
                     PMVSAPFVLSVQAKMIQAIASIYNQKLTRQRYAEITSTLGLGYLLRWGGRQLIKLVPA
                     YGTAISSIYTAAVTYALGKALCAYFSSMRKGEVLDRAVFERIYADELKSGRALLTRYM
                     QALRSK"
BASE COUNT          806 a         1042 c         1065 g          864 t
ORIGIN      
        1 acatctcatc taaagttttt caataagctc tatttatatc aatgacctac atatgggaca
       61 ggactgagtc gacgtatccc gcctgcctta accgtgtagc tcttatgcgc ctctatctgt
      121 tgacaacccc actccgaaca gtacagtggc gttggggtga atgacataac tcctccttcc
      181 ttctaggggg taggttattc tctttgaaac aggttatgtt gctcaataag agtcagcgat
      241 ttccgacacg aggactttga actgatcggc taccggtacc atccggcaat acctgcgccc
      301 attgcagtat aattgatcta tgtcgaagcc tgtgatcgcg cttgtggtag cgatggaccg
      361 ccagggagtc atcggcgcca aggggaaact accttggcat ttgcccgcgg atctgaagca
      421 tttccgagct atcacctggg gcaaacccat cgtgatgggc cgcaagaccc atgaatccat
      481 cggccggctg ttgccaggga gagagaatat cgtggtgagt agaaccctgg gttttgaaag
      541 cccagggtgt gttgttgtga ggagtgtcgt agaggtgctc atgcataccc gagaggcgcc
      601 agaggtgatg gtgatcggcg gggcggcgct ctatgccgag accttgcccc tggcacatcg
      661 gatctatctc accgaggtgc acgcgaagtt cgatggagat acctattttc caccctataa
      721 tcgtgcagct tggagagagc agcagcgcat agatcatccc gtcgatgagc tgaatcccta
      781 tccctatagc tttgtgctgc tcgaacgtcc ttgagccccc gcttctcggt acgcactata
      841 attgtagttg tgactcagat ttgctgtttg atgagaggaa atcaggagta atcagggtcg
      901 ggaacatttt cccctatgtc gcagacttag taatgattgt gctattctcg ggtttcgcta
      961 cgcacccggg cttatttacg gagacgcttt gttatcttat cacccagctt cttcgcggtt
     1021 tccgctgcga tacgcgcgct cgcatcaagg acaattctgc cagccttcca ggcctgttcg
     1081 cgcaggcggt tccaatagtc ctctcggcgc tgctcgcgca ggcagcgcag atatttcacc
     1141 tgttgcgcgc gatcaagcct caccaggatc gccggtatca caccttcctc gatattgtac
     1201 ccgtgtccag tttgaaggct tacggggatg atgtcactca agcccacccc caagtcctcg
     1261 gcagtcgcct ccatggcctt gcggatcgcc tgctccttgg ggcgttgagg ctggacgatg
     1321 ttgtagggag gggcccattc gcgcaccggg cggaggcgat cgatgtggct tagaataacc
     1381 agaattggcg gcgcgttcag ttctggatgg ctctggaaca gatcgaggat cctctggagc
     1441 aactgccggt cggggtggcg cgcggcgctg atggcggagc atacaagcac aatgaggtcg
     1501 ctgcgcacga tctcggcctc cgttttgtct agcccctgcc cctccgtggg cccggcatag
     1561 ccagcactgt ccaggataag catctgctcc accccgtcgc gctctaacag atacggggtg
     1621 aatccagcgg tcagtggcaa gacgtcggtc atagcccgca tctcaccgaa cagggcgttt
     1681 accaagctcg atttaccgct cttcacctgg cctaatacca atagtcttaa aggttcctca
     1741 agaggcttct cctcgctgcg ctcgagatcc ttttgagaat accgagtgat gtagtcggtt
     1801 gtaggcttat cgcttaacgt gagcgtgccg ctgtaaagct caatggcgta gtaacccacc
     1861 ttctttacat aactctgcag tagccagagt ttgagctctt cggtgggata tttgaggatc
     1921 tggtgcgcgg tcagggcgcg cagttcgcgt aacactgcac ccactggatt gatggccaag
     1981 gagccccatc ggtacgcgtc atagcacctg cgtgcgaagc ttgtgaggcc gtgcccacgc
     2041 atgagatcat ggatagttag ggcgtgactg aaggggatgt gatctaagag ttttcgcaga
     2101 tcttgactga cccgctcaat gatcacgagc aaatacggga tagcgatctc gagaggcgcg
     2161 tttttcgatg cggggtaata gtgtcgtgcg acgccttcga tcgtctgctg agccaattcc
     2221 agcagcttgg taggatggtc gaggggatag tcagcgggat cgagcctatc agcgatctcc
     2281 gtgaccctgt cccagactgg caggctaccc tctggccaga gggggctcgg ctcgacctca
     2341 ggtttatctc tcaacataac ggcgctttta cggttcaaga tccaaagcat cagccagctg
     2401 cctccagcga agaccgcaag caccagcagc cactccataa gaagatcctg ctgccacagc
     2461 cacaacaagc ccaggggcag aagggtcaca atgggcagta cgatagcggc tatcgccaaa
     2521 aacgcgtgga tcgaaaatct tggagacaag gtctttgcgg gcatgggtag aaaacctttt
     2581 acttagaccg gagcgcctgc atatagcgag tcaataacgc gcgtccactc ttcaattcat
     2641 cggcatagat cctctcaaat actgccctat cgagtacttc acccttcctc atggagctga
     2701 aataggcgca cagcgcctta cctaaggcat aggttaccgc ggccgtatag atcgatgaga
     2761 tcgctgtccc ataggccggg acgagcttga tcagctgtct accgccccag cgcaacagat
     2821 accccagccc cagggtgctt gtgatctcgg catagcgctg ccgggtgagt ttctgattat
     2881 agatagaggc aatggcctgt atcatcttgg cctgtaccga gagtacaaac ggggcactga
     2941 ccatgggaaa cgggatcacc tctgagccgc ctgctaaaac ggcatacgcc aggatatgcg
     3001 gatgggcagc ctcggcatag atatcccgca ggggctgcca gtgctcggtg gcctggaaca
     3061 tcccgcgcaa tcccagcggt aaagccacct cgatcgctgc ccagagcgca tcgatcccat
     3121 aattgaccgg aatgtatcca tcttccggca aggtgaaatc cacggccaca aagcgggcct
     3181 cgatgccggt aaaccattcc cgttgtttga ggagtgagcg cgcgagatcc gtgggcacgg
     3241 tctctggcca gggtagttga gcgtaagggt agggttcgag atgaggggtc tcggggctcg
     3301 gatagccctc atgcagggtc gtctggacta cgatcacggg ccactccgga tggactttga
     3361 ggattgcccg cagggcctcc aagaccgcct gttgcgcatg atccatggcc ttgatcacga
     3421 ccatgagcag atgggcctgc tgcatgaaca actgcatgtc ctcggtagga tcgtaattca
     3481 cctcccctaa gccgcgcgtg tccagaaagc ggatgaagca ctgctctgtg tccgggaagt
     3541 cataaaggcg cgcggtgcgt gtgcagggtt ggaaaccatt cccaatctcc gtatcatcgc
     3601 gtcccgtcag ggcacggatc aacgaggttt tgcctgactg ggccttgccc aggagccaga
     3661 tcaccgggat cggcagtgta cgttttatgg cctcaaccct ttccgccagt ttctcatcgc
     3721 ttatcctcgg tttgaagact gcatcggcta gggcgtcgcg gagatctttg gtgtttg
//
LOCUS       DASQSL010000660         3903 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_85591, whole genome shotgun sequence.
ACCESSION   DASQSL010000660 DASQSL010000000
VERSION     DASQSL010000660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3903
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85591"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..958
                     /locus_tag="VE844_06775"
     CDS             <1..958
                     /locus_tag="VE844_06775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c-type biogenesis CcmF C-terminal
                     domain-containing protein"
                     /protein_id="HZC01060.1"
                     /translation="DPISREGFLLGNNLILLTAAASVLLGTLYPLALDALGLGKISVG
                     PPYFNTLFAPLMVVLGLLLGLGTLSRWKQQPFWSLLRRLGLGFALCLAVAVTVPFLIG
                     HGQLIQVAAGLLAAFWVVLTGLIGIRERLVHRRTLGGMVRALPRAFVGMSLAHGGLAM
                     AIIGVTLSSMYGTERDVKLTLGESAEVGGYRFVLDAVDDLEGPNYRAVEARVSVYRGE
                     ERITELRPQKRTYRVQTMPMTEAGIDAGLFRDLYVALGEPLGEKSWSMRLQFKPYVRW
                     IWFGGLMMALGGVLAATDRRYRLAPRQSEVSARAGAVTATAP"
     gene            965..1504
                     /locus_tag="VE844_06780"
     CDS             965..1504
                     /locus_tag="VE844_06780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013219867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbE family thiol:disulfide interchange protein"
                     /protein_id="HZC01061.1"
                     /translation="MLRFVLPLGLFIILVGLLAIGLKQDPRLVPSPLIGKPAPELNLP
                     RLTGEGAPLLRQDLLGKVTLVNVWASWCAACRDEHAILLRLARERTLPILGLNYKDRR
                     EDALAWLAKLGDPYTDIAFDTEGRAAIDWGVYGVPESFLVGPEGVIHYKHVGPLSWEI
                     VQEKLVPLIQRLTPSRGGG"
     gene            1510..1968
                     /locus_tag="VE844_06785"
     CDS             1510..1968
                     /locus_tag="VE844_06785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002808858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein"
                     /protein_id="HZC01062.1"
                     /translation="MRYGFGSLILWLALAAFAKEPAVFNFDTPAQEQRFQQLAQELRC
                     LVCQNQSLADSHADLAGDLRREIYAMLREGKTTQEIIDFMVQRYGNFVRFRPPVDIKT
                     YALWFGPLLLLFAGGWLLARRLRQQSQSPSPELSPEQRHRIDALLEDNNS"
     gene            1965..3194
                     /gene="ccmI"
                     /locus_tag="VE844_06790"
     CDS             1965..3194
                     /gene="ccmI"
                     /locus_tag="VE844_06790"
                     /inference="COORDINATES: protein motif:HMM:TIGR03142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcmI"
                     /protein_id="HZC01063.1"
                     /translation="MTVFWIIAGVMASLALAFLLVPLLRQRGPVDSHPESAELSVHRQ
                     RLHELHDEFGRGTLTEAQFESAKRELAAAAAVDLTPALNPARQFRRHWALAGSITVVL
                     PVFALSVYEFLGARQEVTLQLTADQEAELQARPLRQSIERLEARLAAEPNDGEGWRLL
                     GRSYLALGEYTQAVNALSRAHTLLAEDPELLLDYAQALAQSQGDRLQGAPTQLIRRTL
                     TLAPEHPRALWLGAVAALQEGTRAEAKDYLERLVPHIEPGSEAEQLVRAQLAELQETP
                     DSGKREEATAAVSPQPRVEIQVSLDPKLAANVSPTDTVFIFARAVQGPPMPLAVVRKH
                     VKDLPVTVVLDDSKAMAPELRLSKFTEVVVGARVSRAGDPLPRSGDLEGFSNSAIKLA
                     DLLSIQPVIISIDRVVP"
     gene            complement(3248..>3903)
                     /locus_tag="VE844_06795"
     CDS             complement(3248..>3903)
                     /locus_tag="VE844_06795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01064.1"
                     /translation="ALPPKQVIILEVAKDSFLRQAAKDGNDGASPRLRLKGGYGEKTR
                     VVVEFDLAHINPDEVKSAVLELHIAKTDEEWGRYGQPVDVHPLPSDFAEGNGLGAGVS
                     LAFKTSGQGPGVTWKCAIDGEIANLQPDCDPLWVGGRGANGKFAEATAAPIVHTNAMM
                     GKVIWGVTADVKAGISQWLIKKKINGWRTGRVEYYSREGAREAGNMELAPRLVITLK"
BASE COUNT          713 a         1191 c         1111 g          888 t
ORIGIN      
        1 tgatccgatc tcccgcgagg gttttttatt gggtaataat ctgatcctgc tcacggcggc
       61 tgccagcgtg ctgttaggca cactctatcc cttagccctg gatgcgcttg ggctcggcaa
      121 gatctcggtc ggtcctccct acttcaatac cctatttgcg ccgcttatgg tggtgttagg
      181 cttgctgctt ggactcggca ccctgtcccg ctggaagcaa caaccgtttt ggagcctcct
      241 gcgccggctc gggctcggct ttgccctctg tttagcggtt gccgtcaccg tgccgttttt
      301 gatcggtcac ggccaactca tccaggtagc cgcaggtctc ctagccgctt tctgggtcgt
      361 cctgacgggt ctcatcggga tccgcgagcg gctggtgcac aggcgcacgc tgggcggtat
      421 ggtgcgtgcc ttacctaggg cctttgtcgg catgtcgctc gcccatggag gattggctat
      481 ggctatcatc ggcgttactc tgagctccat gtatggaacc gagcgcgacg tcaagcttac
      541 gttgggcgag tctgccgagg tcggcggtta tcgctttgtg ctcgatgccg tagatgatct
      601 agaagggccc aattatcgag cagtcgaggc ccgggtctcg gtgtaccgcg gagaggaacg
      661 gatcacggag ctgcggcccc aaaagcgcac ctaccgggtg cagaccatgc ctatgacaga
      721 ggctggtatc gatgcgggtt tgttccggga tctctatgtg gcgcttggtg agccgcttgg
      781 ggaaaagagc tggagcatgc gtttgcagtt caaaccgtat gttcgctgga tctggtttgg
      841 cggcttgatg atggcgttag gtggcgtact ggctgccacc gatcgccgct accgcttggc
      901 tccacgccag agcgaggtaa gtgccagagc gggcgcagtg accgcgacag ccccttgaag
      961 acgcatgctc cgctttgtcc ttccgcttgg tttattcatt atcctggtcg ggctgctggc
     1021 gatcggcctc aagcaagacc cacggcttgt accctcaccc ttgatcggca agcctgctcc
     1081 tgagcttaat ttaccccgcc tcacggggga aggtgcaccg ctgctgcgtc aggatctgct
     1141 gggcaaagtg accctcgtca atgtctgggc gagttggtgt gccgcttgcc gcgatgagca
     1201 tgcgatctta ctgcgcctgg cccgtgaacg gaccttgccg atccttggtc tcaactataa
     1261 agaccgccgt gaggacgccc tggcgtggct tgccaaactc ggtgatccgt ataccgacat
     1321 cgccttcgat accgaggggc gagcggctat cgattggggg gtctacggcg tccctgagag
     1381 ctttctggtc ggtccggaag gcgtcattca ttacaaacac gtcggtccgc tttcttggga
     1441 gatcgtccaa gagaagctcg tgccgctcat ccagagactc accccaagcc gaggaggagg
     1501 ttaacgaata tgcgttacgg gtttggatca ttgatccttt ggctcgctct ggcggctttt
     1561 gccaaggaac ctgccgtgtt caactttgac acgcccgccc aagagcagcg tttccagcaa
     1621 ttggcccagg aactccgctg cctggtctgc caaaaccagt cgcttgccga ttcccatgcc
     1681 gatcttgctg gggatctgcg gcgcgagatc tacgcgatgc ttcgtgaggg caaaaccact
     1741 caggagatca tcgacttcat ggtgcagcgt tacggcaatt tcgtgcgctt ccgcccgccc
     1801 gtggacatca aaacctatgc cctgtggttt ggccctctgc tgctcttgtt tgcgggcggg
     1861 tggctgctcg cccgcaggct gcgccagcag agccaatcgc catcgcccga gttatccccc
     1921 gagcaacggc atcgcattga cgccctactt gaagacaata attcatgacc gtcttttgga
     1981 tcattgcagg ggtcatggca agcttggccc tggccttttt gcttgtacct ttgttgcgtc
     2041 aacgcgggcc agtcgattcc catcccgagt ccgctgagct ttcggtccat cggcagcggc
     2101 ttcacgaact gcacgatgag ttcgggcgag gcacactgac agaggcccaa ttcgagagcg
     2161 ctaagcgcga attagcagcc gcagcagccg tggacctcac gccagcattg aatccagccc
     2221 ggcaattcag gcggcattgg gcgcttgcag ggagcatcac cgtggtattg ccggtgttcg
     2281 ccttgagcgt atacgagttc ttaggcgccc gccaagaggt cacgctgcag ttgactgcgg
     2341 accaagaagc ggagctacaa gccaggccac tgcgacaatc tatcgaacgg ctcgaggcac
     2401 ggctcgccgc tgagcctaac gacggcgagg gctggcggtt gctagggcgt tcttacctgg
     2461 ccctagggga atacactcag gctgtcaacg ccttaagccg cgcccatacc ttgctggcag
     2521 aggatcccga gttattgctc gattatgccc aagccctcgc ccaaagccaa ggagatcggc
     2581 tgcaaggagc ccccacccag cttatccggc ggacgcttac cttagctccc gagcatccgc
     2641 gggccttgtg gctaggggct gtcgcggctt tacaggaggg cacacgcgcc gaggccaagg
     2701 attacttgga acgcttggtt cctcatatcg aacctggcag cgaggcagaa cagctggtgc
     2761 gggcccagct tgcagagttg caagaaaccc ctgacagtgg caagcgtgaa gaggcaacgg
     2821 ccgctgtgtc tcctcagccc cgcgtcgaga tccaggtctc gcttgaccca aaactagccg
     2881 ccaacgtctc gccgaccgat actgtcttca tatttgcccg cgccgtgcag gggccgccca
     2941 tgcctctcgc cgtggtgcgt aagcacgtga aggatctgcc cgtgaccgtg gtcctggatg
     3001 attcaaaggc aatggcccca gagttgcggt tatcaaaatt caccgaagtg gtggtaggcg
     3061 cccgcgtctc tcgcgccggt gatcctctgc ctcgcagcgg cgatctcgag ggtttctcca
     3121 acagcgctat aaagcttgcc gatctcctct ctattcagcc ggtgatcatt agcattgatc
     3181 gcgtggttcc ttaaccgctt cgccacccca tccctaccct cccccttggt gagggtaggg
     3241 atggggttta tttaagcgtg atcacaagcc ttggcgccaa ctccatattt ccggcttctc
     3301 gcgcgccctc tctggaatag tactcaacgc gccctgttcg ccacccgttt atcttctttt
     3361 ttataagcca ttgacttatg ccagccttta catccgcggt gacaccccag atcaccttgc
     3421 ccatcattgc attggtatgg acgataggag ccgcggttgc ttcagcaaat tttccgttcg
     3481 ctcctcggcc tcctacccag agggggtcgc aatccggctg cagattggcg atctcgccat
     3541 ctatagcaca cttccacgta accccagggc cttggccgct ggttttgaag gcaagactca
     3601 ctcccgcacc taggccattg ccctctgcaa aatcactggg caaggggtgc acatcaaccg
     3661 gctggccata cctaccccat tcttcatcgg tctttgcaat atgcaattcg agcacagccg
     3721 actttacttc atcagggtta atatgagcca gatcaaactc cacgacgacc cgggtcttct
     3781 cgccataacc tcccttaagc cgcagccggg gactggcacc atcattgccg tcctttgctg
     3841 cctggcgcaa gaagctatct ttagcaacct ccaagatgat cacctgctta gggggcagcg
     3901 cgc
//
LOCUS       DASQSL010000661         1078 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_182725, whole genome shotgun sequence.
ACCESSION   DASQSL010000661 DASQSL010000000
VERSION     DASQSL010000661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1078
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182725"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(189..674)
                     /locus_tag="VE844_06800"
     CDS             complement(189..674)
                     /locus_tag="VE844_06800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015141235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HZC01065.1"
                     /translation="MQPNIGVTNEHSKGVVQLLTVLLADEYVLYTKTRHYHWNVVGPQ
                     FHELHEFFEEQYKELNEVVDDMAERMRALGGHAIGTLAEFAQHTRLKEHPGQYPEAQE
                     MLSNLLADHEMVSRQLRSDAETCAAEYQDQGTHDFLIGLVLRHEKMAWMLRGFLEGKS
                     A"
BASE COUNT          206 a          345 c          278 g          249 t
ORIGIN      
        1 tccgtagcca tgtcctcctc cttgtgcggc ctccgcggca gacctgccag attcatgtct
       61 gaacggtata ttgtcgggga gcattacgct cgccgtgaag gggtgctgaa cggttgccat
      121 ccgccttcaa gttcgcattt agccctcccg tcaggcgccc ccccagcgag cttttctccc
      181 cggtcaggtt acgcggactt gccttcgagg aacccccgca gcatccacgc cattttttcg
      241 tggcgcagca cgaggccgat caagaaatcg tgggtgccct ggtcctggta ctccgccgca
      301 cacgtctccg cgtcgctgcg cagctgccgg ctcaccattt cgtggtcggc caacaggttg
      361 gacagcatct cctgcgcctc cggatactga cccggatgtt ccttgagccg agtgtgctgg
      421 gcaaactccg ccagcgtgcc gatggcgtgc cccccaagcg cccgcatccg ttcggccatg
      481 tcgtccacga cctcattcaa ctccttatac tgctcttcga agaactcatg taactcatgg
      541 aattgcgggc cgaccacatt ccagtggtaa tgtcgcgttt tggtatagag gacatactca
      601 tccgccagga gcaccgtcag aagttgtacc acgcccttgg aatgctcatt tgtgacgccg
      661 atattgggct gcattgccta tcctcccttt gctaatgaga tgtgagtcgc acggtcaaag
      721 gctctttcag ccccagagat gattctttag gtaataaccg aaaccactgc ccccctgggc
      781 attttttctc aggagtgata acattctgtg gctacacgac acgcgtatcg ccacagatct
      841 cctctgtgtg taacacgccc ctacaggttt ctagctctcc gcaacaacac aggtgaaacg
      901 agtccgatct tccgcaccat caaaggtccg atcataagca ggatggcctc gtgagcagga
      961 tggcctcgtg gtgcagctga caggcatagt ggcatcacag tgtaacagcg agcccgtcac
     1021 aggcgaccag tccgctctcg ttccgtggat cgctctattg gccggctcct atcgcggc
//
LOCUS       DASQSL010000662         2025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_73709, whole genome shotgun sequence.
ACCESSION   DASQSL010000662 DASQSL010000000
VERSION     DASQSL010000662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2025
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73709"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..591
                     /locus_tag="VE844_06805"
     CDS             <1..591
                     /locus_tag="VE844_06805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013031937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04283 family arsenosugar biosynthesis
                     glycosyltransferase"
                     /protein_id="HZC01066.1"
                     /translation="HEIIVVDGGSHDRTLALARPLVDRVCVSPPGRARQMNTGAALAR
                     GEVFIFLHADTRLPEAADRWLTQALQPSDKRWGRFDVRLSGERFMFRVIETLMNLRSR
                     LTGIATGDQAIFVHRRLFQAIGGFPEIELMEDIALSKCLKRLSPPLCLQPWLITSSRR
                     WERHGVWTMIVRMWLLRLAYWLGVPPARLARHYAKR"
     gene            578..1246
                     /locus_tag="VE844_06810"
     CDS             578..1246
                     /locus_tag="VE844_06810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013031938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04282 family arsenosugar biosynthesis
                     glycosyltransferase"
                     /protein_id="HZC01067.1"
                     /translation="MQSAEGTLVVFARAPVPGEVKTRLIPLLGAQAAADLYRQLLEYA
                     VATACRSTFSTIELWCTPNPDHPVFEKLRKTYSVSLHPQLGTDLGVRMHTALREALSR
                     SFFAAVIGTDSPSLTIDDVNEAYRALSSGYDAVLGPAEDGGYVLIGVRQVCESLFAGI
                     IWGGDAVARETRARLQALNWRWHELPPRWDVDLPEDVERLYRFSIFQNGAPTAPETAP
                     KDRR"
     gene            complement(1185..>2025)
                     /locus_tag="VE844_06815"
     CDS             complement(1185..>2025)
                     /locus_tag="VE844_06815"
                     /inference="COORDINATES: protein motif:HMM:NF015094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AarF/UbiB family protein"
                     /protein_id="HZC01068.1"
                     /translation="QQIFLYGFFHSDPHAGNFLAMPKSRIAFIDFGLVEQISEAERQS
                     LARLFWATLQEDYEQVAALWLEMAPAGANADPGGFRRGLEKILWKQLNQPYERVRIGE
                     MFLQMVQNGARHGLKLPSELFLLFRTLAEIEGLLRLLHPGFNVIAHCREFAQEQEAAA
                     REPAQMARAARDEAQQWIGTVWRLPHELEDLLKRMMAGRFSVDFVHQGLDYLVGEMDR
                     SSNRLTVGLIVAALIIGSSLIILAGKGPMLWDLPIFGLAAFAIACLLGLFLVLLVLRS
                     GKY"
BASE COUNT          417 a          603 c          595 g          410 t
ORIGIN      
        1 cacgaaatca tcgtggtcga tggaggcagc catgaccgca cattagcact ggccaggccg
       61 ttggtggata gggtgtgcgt tagcccaccg ggccgcgctc ggcagatgaa taccggggcc
      121 gcccttgcca ggggcgaggt ctttatcttc ctgcacgccg atacccgctt gccggaagca
      181 gccgatcgct ggcttacaca agcgctgcaa ccgagcgata aacgctgggg gcgcttcgat
      241 gtgcggctgt cgggggagcg ttttatgttt cgagtgatag agacactcat gaacctgcgc
      301 tccaggctca ccgggatcgc caccggcgat caagcgatct tcgtgcaccg caggctgttc
      361 caagcgatcg gtggttttcc cgagatcgag ctcatggaag atatcgccct ctcaaaatgc
      421 ctcaaacgcc tgagcccccc gctttgcctg caaccgtggc taatcacctc gagccgccgg
      481 tgggagcggc atggcgtatg gactatgatc gttcgcatgt ggctattgcg tctggcttac
      541 tggcttgggg tgccacctgc gaggcttgcg cgtcattatg caaagcgctg aggggacctt
      601 ggtcgtattc gcccgggccc ctgtgcccgg cgaggtcaaa acccgcctga tccccctgct
      661 cggggcccaa gcggcggccg atctataccg gcagttgcta gagtatgccg tagccaccgc
      721 ttgccgttca accttcagca cgatcgagct ttggtgcacc cccaacccgg atcatcccgt
      781 ttttgagaaa ctgaggaaaa cctatagtgt ttcactccac ccacagctcg gtacggatct
      841 gggcgtacgc atgcataccg ccctccggga ggctctaagc cgttccttct ttgcggctgt
      901 gatcggcacg gatagccctt ccctgacgat cgacgatgtc aatgaggcct atcgagcgct
      961 aagcagcggt tatgatgcgg tcctgggccc cgctgaagac ggcggttatg tgcttatcgg
     1021 tgtgcgccag gtgtgtgagt cgctttttgc tgggatcatc tggggcggtg acgccgttgc
     1081 cagagagacg cgagcgcgtc tgcaggcgct gaactggcgc tggcatgagt taccaccgcg
     1141 ctgggatgtg gatctacccg aagacgtgga acggctctat cgcttcagta ttttccagaa
     1201 cggagcacca acagcaccag aaacagcccc aaaagacagg cgatagcaaa tgctgccagg
     1261 ccgaagatcg gcagatccca gagcataggg cccttgcccg ccaggatgat gaggctcgaa
     1321 ccaatgatga gcgcggcgac gatgagacct acagtcaagc ggttgctcga acgatccatc
     1381 tccccaacca ggtagtccaa tccctgatgc acgaaatcga ccgaaaatcg gcccgccatc
     1441 attcttttta gcagatcctc caactcatgg ggcagacgcc acacagtgcc tatccactgt
     1501 tgcgcctcat cgcgcgctgc gcgggccatc tgagcgggtt cccgggccgc ggcctcttgt
     1561 tcttgagcga actcgcggca gtgggcgatg acattaaacc cgggatgcaa gaggcgtaag
     1621 aggccttcga tctcagccag ggtccggaac agcaaaaaca gttcgctcgg caacttgagc
     1681 ccatggcggg cgccattttg gaccatttgt agaaacatct caccgatccg gacccgttca
     1741 tagggctgat tcaattgttt ccacaggatc ttttccagcc ctcttcgaaa tccgccagga
     1801 tcggcgttgg cgccggcagg ggccatctcc agccaaaggg cagcgacctg ctcgtagtct
     1861 tcctgcaggg tagcccaaaa aagccgggcc aaggattgac gctcagcctc cgagatctgt
     1921 tcgaccagcc cgaaatcgat gaaagcgatc cggcttttag gcatcgccag aaaattgcct
     1981 gcatgggggt ccgagtggaa aaatccatag aggaagatct gttgg
//
LOCUS       DASQSL010000663         1657 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_156146, whole genome shotgun sequence.
ACCESSION   DASQSL010000663 DASQSL010000000
VERSION     DASQSL010000663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1657)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1657)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1657
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156146"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..815
                     /locus_tag="VE844_06820"
     CDS             <1..815
                     /locus_tag="VE844_06820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011633312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HZC01069.1"
                     /translation="NPNQHRSHALLYGQDPGITARIFLARTLWVLGEVEQAETLALEA
                     IGMARELDHPFTLAFTLAVLSWVYSTFRNANRTLELADEAIAVSTQYSFELSLAWATT
                     VQGWALAENGQEEGVGKLTSGLSAVRATGESVTTIDMLSLLAEIYLRKKRFSEGLAAI
                     EDAQKTAVTQEELFWQAELFRLKGELLLGQSDQSLNEAEQCFCKALEIARNQHAKMLE
                     LRAATSLARLWKKLNQLDEAKSILSSVYSSFTEGFRSPDLIEAKTVLEQLIE"
     gene            complement(900..>1657)
                     /locus_tag="VE844_06825"
     CDS             complement(900..>1657)
                     /locus_tag="VE844_06825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011633313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HZC01070.1"
                     /translation="GWKDRIYFLDFRMVGAVGADFREHLMLLLMALWQEDAGFLTDVT
                     LMMTGAIDRSDLDVFRFQAEIGEVMAKYRTAALAEMQIGPILQEMSEIALRYGVPLPA
                     SLTLTTKALAQVQLATAELDPELDPFEVAGKFLMRWIVKSLSTTLDPKTLVYRSQKLK
                     VRATRVIEAVERLLGARPGQKLEVNFRAATLESTLRQAGRRLALGLTAGAAGLATGLT
                     ALSTGVPGWVPVTFGVIGGVLTVGLLIDLVRQH"
BASE COUNT          366 a          471 c          476 g          344 t
ORIGIN      
        1 ataatcccaa tcaacaccgc tcgcatgcct tactctacgg ccaggacccc gggataaccg
       61 cgaggatttt cctggccagg acactctggg tgttaggtga ggttgaacaa gctgaaacgc
      121 tggcgctgga ggccattggc atggcgagag agttagatca cccctttact ctggctttta
      181 ccttagccgt cctttcctgg gtctattcaa cctttcgaaa cgcgaataga acgctggagc
      241 ttgcggacga agcgatcgca gtttcaactc aatactcatt tgaattgagt ttggcgtggg
      301 cgacgaccgt tcagggatgg gctttggccg aaaatgggca agaggaaggt gtaggcaagt
      361 tgacaagcgg gctttccgct gttcgggcca caggcgaaag tgtcaccacc attgatatgt
      421 tgtctttact tgcggaaata tatttacgaa aaaaacgctt tagcgaaggc ctggccgcta
      481 ttgaggatgc tcagaagact gccgtaaccc aggaagaact tttttggcaa gcggaattgt
      541 tccgactgaa aggcgagctc ctgctcggac aatccgacca atcactcaat gaagcagaac
      601 agtgtttttg taaagccctg gagattgcac ggaatcagca tgcgaaaatg ctcgaactga
      661 gagccgccac cagcctcgcc aggctctgga aaaaactgaa tcaattggat gaggctaaaa
      721 gcatcttgag ttccgtttac tctagtttca cagaaggctt cagaagccca gatctgattg
      781 aggccaaaac agttcttgaa cagcttattg agtgacaaac ggattgattg acgttatgag
      841 ccacgttatt gggctaactg acggcgaagg tcctggcttt ggccctgatc gtcgagcgtt
      901 cagtgctgcc gcaccaagtc gatgagcagc ccgacggtga gcacaccccc gatcacaccg
      961 aaggtcacgg gaacccaacc gggcacccct gtcgataggg ccgtgaggcc ggtggcgagc
     1021 ccggccgctc ccgccgtcag tccgagcgcc agccggcgtc cagcctggcg aagggtgctt
     1081 tcgagcgttg ccgcccggaa gttcacctcg agcttttggc cggggcgggc tccgaggagg
     1141 cgttcgaccg cctcgatcac gcgcgtggcc cgcactttca gcttctgcga tcggtagaca
     1201 agggtcttcg ggtcgagcgt ggtgctcagg ctcttgacta tccatcgcat caggaacttc
     1261 ccggccacct cgaagggatc aagctccggg tcgagctctg ccgtcgcaag ctgtacctgc
     1321 gcgagcgctt tggtggtgag tgtgagcgat gccggcagcg gcaccccgta gcgcagcgcg
     1381 atctcgctca tctcctgcag gatcggcccg atctgcatct cggcaagggc ggcagtgcga
     1441 tatttcgcca tcacctcccc aatctccgcc tggaaccgga aaacgtccag gtcgctgcgg
     1501 tcgatggcgc cggtcatcat cagcgtgacg tcggtgagga aaccggcatc ttcctgccac
     1561 aaggccatca gcagaagcat cagatgctcg cggaagtcgg cccccaccgc tccgaccatc
     1621 ctgaaatcga ggaagtagat gcggtccttc cacccca
//
LOCUS       DASQSL010000664         3889 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_5466, whole genome shotgun sequence.
ACCESSION   DASQSL010000664 DASQSL010000000
VERSION     DASQSL010000664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3889)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3889)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3889
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5466"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            265..1311
                     /locus_tag="VE844_06830"
     CDS             265..1311
                     /locus_tag="VE844_06830"
                     /inference="COORDINATES: protein motif:HMM:NF021646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01071.1"
                     /translation="MINLVLFIPGFLSPKARWAEADSAVDIALPALELLLARASHTRE
                     AIGEGSYEAALCKLFGIEPKAYGDLPIAALTHLIDFEGDHAGVWIRADPVYLRPDLGK
                     LLLFDSSAFHIEKEEAETLIREINPILGQQGQPLSFGKDWTRWYLRLPRAPRIETYPP
                     STVTGQHIDPYIPAGPERRDWHRLFNETQMLLHSAKVNQAREARGEPPINSVWFWGSG
                     ALPATPKVHWTKVWSSEPLAQALAKFCGRPYAVPTAVRDCLEEGTAGGDVLVVLHKAR
                     SLSEDSSRWYEYIMDLERNWFAPSLENLKAGRLASLTILTAGDSFTVTRSRLRHFWLR
                     RKGISVYHTLRDVP"
     gene            1383..3233
                     /locus_tag="VE844_06835"
     CDS             1383..3233
                     /locus_tag="VE844_06835"
                     /EC_number="4.1.1.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009148487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004611 - phosphoenolpyruvate
                     carboxykinase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0017076 - purine nucleotide binding
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (GTP)"
                     /protein_id="HZC01072.1"
                     /translation="MTITHDGKKRTNNKRLLAWVDEIAALCKPDTIYWCDGSQEEYDR
                     LCEELVQKGTFIRLNPDKHPNSFLARSQPSDVARVEDRTYVCSDTQEGAGPTNNWVAP
                     GEMRATLKGLFDGCMQGRTMYIIPFSMGPLGSHISHIGVEISDSAYVAINQRIMTRMG
                     QAALDVLGAEGEFVPCVHSVGAPVQPHQEDVPWPCNDTKYIVHFPENREVWSYGSGYG
                     GNALLGKKCFALRIASVMARDQGWLAEHMLILGVESPDGEKTYVSAAFPSACGKTNFA
                     MLIPPKAFNGWKVTTIGDDIAWIKPGKDGKFYAINPESGYFGVAPGTNMESNPNAILT
                     LKENSIFTNVALTDDGDVWWEGMTKEPPKHLIDWKGNDWTPASGTPAAHPNARFTAPA
                     RQCPSIDPNWENPNGVPISAFIFGGRVSKNFPLVFQAYDWEHGVYLAATMGSEATAAA
                     VGQADMRRDPMAMLPFCGYNMADYWKHWLKIGRQSVATPPLIFRVNWFRKDEQGKFIW
                     PGYGENMRALKWIVERCRGRSRGVESPLGWVPPYEELIWEGLSFSEERFYEIMDIDRE
                     KARQEANDQQELFTRFGEHLPREMELERELLLSRLYRSPPVWELRLARGA"
     gene            3298..>3889
                     /locus_tag="VE844_06840"
     CDS             3298..>3889
                     /locus_tag="VE844_06840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012258815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /protein_id="HZC01073.1"
                     /translation="METWVYHFEQGNRTLLSLLGGKGTGLAEMSCAGLPVPPGFTITT
                     AACKAYYLHDKLFPEGMWSQSKAALKVVEEKTGKRFGDSANPLLVSVRSGAPVSMPGM
                     MDTVLNLGLNSNTLQGLAQLTGDERFAWDAYRRFVQMFGEIVLGAPKEKLDRAMEQLK
                     AQFNTKRDADLPVRAWRLLVDRFKEIIFGETRQEVPE"
BASE COUNT          858 a         1050 c         1149 g          832 t
ORIGIN      
        1 agtctctgac caagaaatgg aaacgctcaa catagaacga aacgactttc atggtgagtg
       61 gaactatacg attaggccga gactttgatg aaactttatt tatttacgtc ccctaagctc
      121 atggaaagct gttctttcaa actatccgag ataccggcat cggacagact ccactggtcc
      181 agagactgct gcaaatcatt ttggagcaac agaggcgaat cgagcggtca ctaaccaccc
      241 gcagagcagg tgattagtga ttaaatgatt aatctagtcc tcttcatccc gggtttcctc
      301 agtcccaagg cgagatgggc tgaggctgat tcggcggtgg atatagcgct tccggcttta
      361 gagctgttac tggcccgagc ttcgcatacg cgggaagcaa ttggggaagg ttcctatgaa
      421 gctgcgcttt gtaaactctt cgggatcgag cccaaagcct atggcgatct gccgattgcg
      481 gctctgacgc atctcatcga ctttgaaggg gaccatgcgg gcgtatggat ccgtgccgat
      541 ccggtgtatc tccgccccga tctcggtaaa ttgctgctgt tcgatagcag cgcttttcac
      601 attgaaaaag aggaggcaga aaccctcata cgggagataa atccaatcct aggacagcaa
      661 ggccagccgc tcagcttcgg taaggactgg acccgctggt atctgagact tccgcgagca
      721 ccccggatcg agacctatcc gcccagcaca gtgacggggc agcacatcga cccgtatatt
      781 cccgcgggtc ctgagcgccg tgattggcat cgcctgttca acgagacgca aatgctattg
      841 cattcagcca aggtcaacca agcacgggag gcgcgcggtg aaccgccgat caatagcgta
      901 tggttttggg gcagcggggc gctacctgca actcccaagg tgcattggac caaggtttgg
      961 agtagcgaac ctctggccca ggctttagcc aagttttgcg gtcgccctta tgctgttcca
     1021 acggcggtga gggattgttt agaggaggga acagccggtg gtgatgttct cgtggtcttg
     1081 cacaaggcgc ggtccctaag cgaggatagc tcccgttggt atgagtatat aatggactta
     1141 gaacggaact ggtttgcgcc ctcgctagag aacctcaagg caggacgctt ggccagcctt
     1201 acgatcctca cagccgggga tagcttcacc gttactcgct cgaggttgcg acatttctgg
     1261 ttgaggagaa agggaatcag cgtctatcat acattacgtg atgtgccttg agggggctaa
     1321 aaatttcctt aaaagtattt tcattttata tataattatt catttatagc ggagttgcat
     1381 ctatgacaat cactcacgat ggaaaaaaga ggactaataa caagaggctt ttggcctggg
     1441 tcgacgaaat cgccgccctg tgcaagccgg acacgatcta ttggtgcgat ggatcgcaag
     1501 aagaatatga cagactgtgc gaagaactgg tgcaaaaggg cacgttcatt cgcttgaacc
     1561 ccgacaaaca ccccaatagt ttcctcgctc gatctcagcc cagcgatgtg gcccgggttg
     1621 aggaccgcac ctacgtctgc agtgacaccc aggaaggcgc ggggccaacc aacaactggg
     1681 tggcgcccgg tgagatgcgg gcaacgctca agggcttgtt tgatggctgc atgcagggac
     1741 gtactatgta tatcatcccg ttcagcatgg gtcccctggg ttcccacatc tcgcatattg
     1801 gtgtcgagat cagcgattcg gcgtatgtgg ctatcaatca gcggatcatg acgcgcatgg
     1861 gtcaagccgc tctcgatgtg ctcggcgcgg agggtgaatt tgtcccgtgc gtgcattccg
     1921 tgggcgcccc cgtgcagccc catcaagagg acgtgccctg gccttgcaat gacaccaagt
     1981 atatcgtgca tttcccggag aaccgcgagg tctggtccta tggcagcggc tatggcggca
     2041 atgcgctgct tggcaagaag tgctttgccc tgcgtatcgc ttcggtgatg gcccgtgacc
     2101 agggttggct cgccgagcac atgctgatcc tgggcgttga atcgcccgac ggtgaaaaga
     2161 cctatgtatc ggcggctttc ccaagcgcct gtggcaagac caacttcgcc atgctgatcc
     2221 cgcctaaggc gtttaacggc tggaaggtca cgacgattgg ggacgatatt gcctggatca
     2281 agccggggaa ggatggcaag ttctacgcca tcaatccaga atccggctac ttcggcgtgg
     2341 caccggggac caacatggaa tccaacccca acgccatatt gacccttaaa gagaacagca
     2401 tcttcaccaa tgtagccctg accgacgatg gcgatgtctg gtgggaaggc atgaccaagg
     2461 aacccccaaa acacctcatc gattggaagg gtaacgattg gacccccgct agcggtaccc
     2521 cggcggcgca tccgaatgcc cgtttcacgg cccccgcacg ccagtgcccc tccatcgatc
     2581 ccaactggga gaacccgaac ggtgtgccga tcagcgcctt catctttggc gggcgggtca
     2641 gcaagaactt ccccctggtg ttccaggcct atgactggga gcatggtgtg tatctcgcgg
     2701 cgactatggg gtccgaagcg accgcagcag ccgtgggaca ggcggacatg cgccgcgatc
     2761 cgatggcgat gttgccgttt tgcggctaca acatggccga ttattggaag cactggctta
     2821 agatcgggcg ccagagcgtg gccaccccac cgctcatctt ccgggtcaac tggttccgca
     2881 aggacgagca gggcaagttt atctggcccg gatacggtga aaacatgcgt gcgctcaaat
     2941 ggatcgtaga gcgctgccgt ggccgcagcc gcggtgtcga aagccccctg ggctgggtgc
     3001 cgccctacga agagctgatc tgggaagggc tgagcttttc cgaagagagg ttctacgaga
     3061 tcatggatat cgatcgggaa aaggcgcgcc aggaggccaa cgaccagcaa gagcttttca
     3121 cccgctttgg tgagcatctg ccacgggaga tggagctcga acgcgagctt ttattgtcgc
     3181 gtctttatcg ctcaccgccg gtttgggagc tgaggctggc gcgcggcgcc tgatgatccc
     3241 ctgctgagaa agccggccac gtggccggct ttttttagaa ggagggagac aggggttatg
     3301 gagacctggg tctatcattt cgagcagggt aaccgcacgc tgctctcact ccttggcggc
     3361 aaagggacag gtcttgcgga gatgtcgtgc gcgggtttac cggtaccgcc gggctttacc
     3421 attactaccg ccgcctgcaa ggcctattat ctccacgata agctgttccc tgagggcatg
     3481 tggtcgcaaa gtaaagccgc gctcaaggtg gtcgaggaaa agacgggcaa acgctttggc
     3541 gactcggcca atcctctcct ggtctccgtt cgatcagggg cgcccgtgtc catgcctggg
     3601 atgatggata ccgtgctcaa tctgggtttg aactcgaata ccttacaggg cttggcccaa
     3661 ctcaccggcg atgaacgctt tgcctgggat gcttaccggc gtttcgtgca gatgttcggc
     3721 gagatcgtgc tcggtgcgcc taaggaaaag ctggaccgtg ctatggaaca gctcaaggcc
     3781 caattcaaca ccaagcgcga tgcggacctg ccggttaggg cctggcgcct actcgtggat
     3841 cgattcaagg agatcatctt tggcgagacc cggcaagagg tgcccgagg
//
LOCUS       DASQSL010000665         3106 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_100494, whole genome shotgun sequence.
ACCESSION   DASQSL010000665 DASQSL010000000
VERSION     DASQSL010000665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3106
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100494"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..864
                     /locus_tag="VE844_06845"
     CDS             <1..864
                     /locus_tag="VE844_06845"
                     /inference="COORDINATES: protein motif:HMM:NF017964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amylo-alpha-1,6-glucosidase"
                     /protein_id="HZC01074.1"
                     /translation="SHDAISHEDGALAEAPVALAEVQAYVYAARRGLARTARQLGHLA
                     EADTWERQAAEIHQRFNRDFWLSEEDTYALALDRDQRPCRVVSSNVGHCLFAGIADAD
                     KAQRVITRLFRDDMFCGWGIRTLSAQARRYNPMSYHNGSVWPHDNALIGLGCTRYGAT
                     DRAGQLLTGLFNASTKMAHRRLPELFCGFPRLLHPNPVPYPVACKPQAWSAGSVFLLL
                     QAALGLGIDGWTDCVTFDRMILPQGVNRLDIRKLRVRNGWIDLTIIRDHSGTAVKMIG
                     KQGTAEIVVRH"
     gene            complement(904..1974)
                     /locus_tag="VE844_06850"
     CDS             complement(904..1974)
                     /locus_tag="VE844_06850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020648328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PA0069 family radical SAM protein"
                     /protein_id="HZC01075.1"
                     /translation="MPGSTPHKGRGASFNPHPRYLAERREAFDDGWTETDGKPPPLST
                     TVTVEQARTIITRNDSPDVPFTASINPYRGCEHGCIYCYARPTHAYLDLSPGLDFESK
                     LFAKTNAPERLRQELRKPGYRCEFIALGANTDPYQPIEREYRITRAIIEVLAECHHPL
                     AIVTKSSLIERDLDLLAPMAGKNLIEVFISITTLDHTLARRMEPRTTAPKRRLETLRR
                     LSHAGIPTGVMFAPVIPILNDSEMERVLEAAAEAGARFAGYVIVRLPHEIKDLFKQWL
                     EDHQPLKAQHVMNRIRDLREGKENDPQFGSRMSGTGIYAQLIRRRFELACKRLGLNRS
                     KHTLDATQFRPPAMHGDQITLF"
     gene            2169..>3106
                     /locus_tag="VE844_06855"
     CDS             2169..>3106
                     /locus_tag="VE844_06855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013032717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HZC01076.1"
                     /translation="MLTVTSRRPKVDPQFILDPFEPAYLSLYRLGEFQARVAAGLQEL
                     VDCCACPRNCHVNRLENQARVCHSGRYARVGSAFPHFGEENCLRGWNGSGTIFFSLCN
                     LRCVFCQNWDISQAAVGPECTAEEIADRMLGLQAHGCHNINFVTPEHVVPQVLEAIAA
                     AMPRGLKVPIVYNTSAYDSVASLKLLDGIVDIYLPDFKFWNRESARRLAKAKDYPDRA
                     REAIKEMHRQVGPLRFGPDGLARRGLLVRHLVMPGQTEEVAAICQWLAEEVSADTYIN
                     LMGQYRPEYQVGTKSKDGSVQYLEINRGPYAQEMEKA"
BASE COUNT          636 a          900 c          897 g          673 t
ORIGIN      
        1 tctcacgacg ccatctcgca cgaggacggc gccctcgccg aagcgcccgt ggctctcgct
       61 gaggtccagg cctatgtcta tgcagcccgc cgtggcctcg cgcgcaccgc ccggcagctc
      121 ggccacctgg ccgaagccga cacctgggag cggcaagccg ccgagatcca tcaacggttc
      181 aatcgcgatt tctggctgtc cgaggaagat acctacgcgc tggcgctgga tagggaccag
      241 cgtccctgcc gggtggtcag ctccaatgtc ggtcactgcc tgttcgcagg tatcgccgac
      301 gcggacaagg cccagcgcgt catcacgcgc ctgttccgcg acgatatgtt ctgcggctgg
      361 gggatccgca ccctctccgc ccaggctcgc cgctacaatc cgatgagcta tcacaacggc
      421 tccgtgtggc cccacgacaa cgccctcatt ggtctgggat gcacgcgcta tggcgccacc
      481 gatcgcgccg gacagctttt gaccggcctg ttcaatgcca gcacgaagat ggcccatcgc
      541 cgtctgcccg agctgttttg cggctttcct cgattgctcc accccaatcc tgtaccctat
      601 cccgtcgcct gtaaaccgca agcctggtcc gcagggagtg tctttctgtt actgcaggcc
      661 gccctgggcc tgggtatcga cggctggacg gactgcgtta ccttcgaccg catgatcctg
      721 ccccaggggg tcaatcgcct cgatatccgt aagctgcggg tccgtaacgg ctggatcgac
      781 ctcaccatca tccgcgacca ctcgggcacc gctgtcaaga tgatcggtaa gcaaggaacg
      841 gccgaaatcg tcgtgcggca ctagggttct tgtaccccat gaaacttcag gctaccaatc
      901 cccttaaaac aatgtgattt gatcgccatg catcgctggt ggccgaaact gtgtggcatc
      961 cagtgtatgc ttggatctat tcaaacccag ccgcttgcaa gcaagctcga aacgtcgacg
     1021 gatcagttgg gcatagatcc ctgtaccgct catccggctc ccaaattggg ggtcgttctc
     1081 cttcccctcg cgcagatcgc ggatacgatt catgacatgc tgtgccttga gcggttgatg
     1141 atcctccagc cattgtttga acaaatcttt gatctcatgg ggaaggcgca cgatcacata
     1201 accggcaaaa cgcgcacccg cctctgcggc cgcttcaagt acccgctcca tctcgctgtc
     1261 attgaggatg gggatcaccg gtgcaaacat tacgccggta gggatccctg catggcttag
     1321 acgtcgcaat gtctcaaggc gccgcttggg ggctgtagtc cgcggttcca tacggcgcgc
     1381 aagcgtatga tccagggtag tgatagaaat aaacacctcg atgaggtttt tcccggccat
     1441 gggcgccaat agatcgagat cccgctcgat cagggaagat ttcgtgacaa tggcaagcgg
     1501 atgatggcat tccgccagga cctcgatgat cgcgcgggtg atacggtact cgcgctcaat
     1561 gggttgatag ggatccgtgt tcgcacctaa agcgataaat tcacagcggt aaccgggctt
     1621 gcgcagttcc tgtctcaagc gttctggagc attggtcttg gcgaagagct tgctctcaaa
     1681 atcgagaccg ggcgatagat ccagataggc atgggtcggc cgggcatagc aatagatgca
     1741 accgtgctcg caaccccggt aaggattgat ggaggcggta aacggcacat ccggtgagtc
     1801 gttgcgagtg atgatcgtgc gtgcctgctc caccgtgaca gtggtagaaa gcggcggtgg
     1861 ctttccatcc gtctcggtcc agccatcgtc gaacgcctca cggcgctcgg ccagataacg
     1921 cggatgggga ttgaaggagg cgccacggcc tttgtgggga gtggatcctg gcatggtagt
     1981 agcccaacag tgtcttgact attactgatt ataacgtgag atcgggccag atgccgtttc
     2041 cagcgcagac gcaacaggcg atgaggagca caaataccaa tttgcttttt agcctatcca
     2101 ggagtaaggt tagtcaagag tcataatggt aaggtatgtt gaatctctac gcataatagc
     2161 tggctgttat gttaactgtg acttccagga ggcctaaggt cgatccgcag tttatcctcg
     2221 atccattcga gccagcttat ctctccctct atcgcttggg tgagttccag gcgcgggtag
     2281 cagcaggttt acaggagctt gtcgattgct gtgcctgtcc gcgcaattgc cacgtcaacc
     2341 gtcttgagaa ccaagcccgg gtctgtcata gcggacggta tgcacgggtc gggagcgctt
     2401 ttccccattt tggtgaggaa aactgcctgc gcggctggaa tggctcgggg acaatctttt
     2461 tcagcctgtg caacctgcgc tgcgtgtttt gccaaaactg ggatattagc caagcagccg
     2521 taggtcccga gtgcacagcc gaggagatcg ccgatcgaat gctcggactg caggcccatg
     2581 gttgccataa catcaacttt gtgacccccg agcatgtcgt cccgcaagtc ttagaggcga
     2641 ttgctgcggc catgccgcgg gggcttaaag tccctattgt ctacaacacc agcgcctatg
     2701 attccgtcgc ttcacttaag ctgctcgatg ggatcgtcga tatctacctg cccgacttca
     2761 aattctggaa ccgggaaagc gcgcgtcgcc tggccaaggc caaagattat cccgatcgcg
     2821 ctcgcgaggc cattaaagag atgcaccgcc aggttgggcc actgcgtttt ggtccagatg
     2881 gacttgcacg ccgcggtttg ctggttcgcc atctggtgat gccagggcaa acggaggagg
     2941 tggcagctat ctgccaatgg ttggcggaag aagtatctgc cgatacctat atcaatctca
     3001 tgggccagta ccgtcctgaa taccaggtgg ggactaagag caaggatggc tcggtgcagt
     3061 acctcgagat caaccgtggt ccctatgccc aggaaatgga gaaggc
//
LOCUS       DASQSL010000666         1321 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_100495, whole genome shotgun sequence.
ACCESSION   DASQSL010000666 DASQSL010000000
VERSION     DASQSL010000666.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1321
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100495"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            152..451
                     /locus_tag="VE844_06860"
     CDS             152..451
                     /locus_tag="VE844_06860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01077.1"
                     /translation="MTGLHRTPLTTSQKIECVAKALAGPEDSGGITGLSREYGVSRPT
                     VYAAKGAASEVLGEHFEAPESDPRVWVKVDSAQLRRTVVALRVMAPNALCVRLRI"
     gene            448..>1321
                     /locus_tag="VE844_06865"
     CDS             448..>1321
                     /locus_tag="VE844_06865"
                     /inference="COORDINATES: protein motif:HMM:NF013068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01078.1"
                     /translation="MIPIIYPGVRLSYGKVQSIAAEAEARAAAFNTKADLSGVRAGAL
                     DELFSQGEPVLGGVDLDRGYLFGLALRETRGGEDWAEVLKQGQEQGLSLRVVVKDAAK
                     GIESGVREVFPQAEQRDDCFHALYELNKVRGRLEQRAYSAIAAEEEAHYRLPKLPASD
                     RKRRRCQRHRIARAHRHCQEAIARFDRSEVAMHEVQEALECVDLTDGHLRSAEEVKAI
                     VVHAATTLQSLEPACHKAARYLRNRAAGLSLATGELNSQLLALATTYSLAAVALACML
                     WRLVFELQNERHPWQ"
BASE COUNT          277 a          353 c          445 g          246 t
ORIGIN      
        1 gactggtcat tctgctttac acactgagtc aaaggaatcg atggctggaa cttgagggtc
       61 ggtgatggag caaggtgagg tgggaagccg ttagatgggt gctataagat gatagggttt
      121 accgaccgct atcaacctca aggagcagcc catgactggt ctacaccgta ccccgctaac
      181 gacttcccag aagattgagt gtgtcgcaaa agcgctcgca ggaccagaag actccggtgg
      241 gataacgggg ctgagccgtg aatacggagt ctctcgcccg acggtgtatg cggccaaggg
      301 ggcggcctcg gaggtattag gcgagcactt tgaggcgcca gaatccgatc cccgggtgtg
      361 ggtcaaggta gactcagcgc aattgcggcg cacggtggtg gcattgcggg taatggcgcc
      421 caatgcgctt tgcgtccgat tgaggatatg atcccgatta tatatcccgg cgtgcgactt
      481 tcctacggga aggtccagag tattgccgcg gaggctgaag cgcgggcggc ggccttcaac
      541 accaaagcag acttatcggg ggtgcgtgcc ggggcgctcg atgagctgtt tagccagggg
      601 gaaccggtct taggcggagt ggatctcgac aggggttacc tgtttggttt ggcgttgcgc
      661 gagacgcgcg gtggcgagga ctgggccgag gtgctcaaac agggccagga gcaggggttg
      721 agcctaaggg tcgtggtcaa ggacgccgcg aaggggatcg aatccggagt gagggaagtc
      781 ttcccgcagg ccgagcaacg cgatgattgt ttccatgccc tttatgagct taataaggtg
      841 cgggggcggc tcgagcagcg ggcttacagt gccattgctg ccgaagaaga agcccactat
      901 cggttgccga agctccccgc aagcgaccgt aaacgacggc ggtgccaacg ccaccgaatc
      961 gcgcgcgccc accgccactg ccaagaggcc attgcccggt ttgaccgctc tgaggtggcc
     1021 atgcacgagg tccaagaagc gctagaatgt gtcgacctca ctgacggcca tctgcgcagt
     1081 gccgaggagg tcaaggcgat cgtggtgcat gcggccacca ccttgcaaag ccttgagccc
     1141 gcctgccaca aggcggcacg gtatctgcgc aatcgcgccg caggattatc gctggcaacg
     1201 ggagaattaa acagccagct gctggcgctg gccacgactt attccctcgc agcagtggca
     1261 ctggcatgta tgctatggcg gctggtcttc gagttacaga atgagcgcca cccctggcaa
     1321 c
//
LOCUS       DASQSL010000667         1029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_46215, whole genome shotgun sequence.
ACCESSION   DASQSL010000667 DASQSL010000000
VERSION     DASQSL010000667.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46215"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..328)
                     /locus_tag="VE844_06870"
     CDS             complement(<1..328)
                     /locus_tag="VE844_06870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="IS982 family transposase"
                     /protein_id="HZC01079.1"
                     /translation="MAIDITALYCCLDDFCKVFEDWEAHRLIPSRTTRQRTGKLSRSE
                     MLFIMVLFHLSPFRHFKAFSHYGIGQQHRACFRELPHYDRFVGLMPRLFAPLMVLLHS
                     LSGAQTG"
     gene            complement(448..>1029)
                     /locus_tag="VE844_06875"
     CDS             complement(448..>1029)
                     /locus_tag="VE844_06875"
                     /inference="COORDINATES: protein motif:HMM:NF033520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS982 family transposase"
                     /protein_id="HZC01080.1"
                     /translation="LHSLSGEETGVYFGDSSKRAVCHNRRIHRHKVFDGLAARGKTSM
                     GWFFGFKLHVVINHKGQIMAVTITPGNTADSTVLDAMTRHLAGKLYADKGYIGQDLFK
                     TLWQRGLHLITGIRRNMRNYLMPLADKIMLRKRFVIETVLDTLKSEMGLEHSRHRSPV
                     NAMVHILSCLIAYAFRPGKPSISLKGQQIEAYP"
BASE COUNT          206 a          274 c          333 g          216 t
ORIGIN      
        1 tgccggtctg ggcgccgctc aagctatgca gcaggaccat caatggcgcg aacagccgcg
       61 gcatcaggcc gacgaaacgg tcgtaatggg gaagctcacg aaagcaggcg cgatgctgct
      121 ggccgatccc ataatgggag aacgccttga agtgtctgaa gggcgagagg tgaaacagca
      181 ccatgatgaa cagcatctca gagcgcgaca gcttgccggt gcgttgccgt gttgtccgcg
      241 acgggatcag ccggtgcgct tcccagtctt cgaacacttt gcagaagtca tcgagacagc
      301 aatacagcgc cgtgatatcg atggccattg agggggctct ccggaagcgg ctttgacgat
      361 cagttttggc agaccgatgc tgtcaatccc ggcatctttt gggaatcccc tcacccctta
      421 tccatagttc gggttattta accccaacta tggataagcc tcgatctgct ggccttttag
      481 cgagatggag ggtttgccgg gccggaaggc gtaggcaatc aggcaggaga ggatgtgaac
      541 catggcgttc acgggcgacc tgtggcgtga atgctcaagg cccatctcgg acttgagggt
      601 atcgaggacg gtctcgatga cgaagcgctt gcgcagcatg atcttgtcag ccaagggcat
      661 taggtagttt cgcatgttcc ggcggatacc agtaatgagg tgcaggccgc gctgccagag
      721 tgtcttgaac aggtcctgac cgatatagcc tttgtcagcg tagagcttgc cggctaggtg
      781 tctggtcatc gcatccagca cggtgctgtc ggcggtgttg ccgggggtga ttgtcacggc
      841 catgatctgg cccttgtggt tgatgacgac gtgcagcttg aagccgaaaa accaccccat
      901 gctggtcttg ccgcgcgccg ccaggccgtc gaagaccttg tggcggtgga tgcggcgatt
      961 gtggcagacg gcgcgcttgc ttgaatcccc gaagtagacg ccggtctcct cgccgctgag
     1021 gctgtgcag
//
LOCUS       DASQSL010000668         1082 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_73768, whole genome shotgun sequence.
ACCESSION   DASQSL010000668 DASQSL010000000
VERSION     DASQSL010000668.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73768"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..994)
                     /locus_tag="VE844_06880"
     CDS             complement(<1..994)
                     /locus_tag="VE844_06880"
                     /inference="COORDINATES: protein motif:HMM:NF020032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01081.1"
                     /translation="MRIGLIMFRHPPDRESPIMPEVIRLLSEWGATVDPIYPEEQLTD
                     LDRVQVDHDLYVLKSGTELALCLGGALHVAGAALLMRDKIVATRALQAAGMPVPETYV
                     TAHAEQLVPLLDQGPLIVKPYRGSQGRGIQVISQPDELSQLVLGPDPVFAQRYHKPHG
                     PDLKIYRIGDQTFGVKRVWPARTYQEKLGEPFDLSPELQEITWRCGEAFGISLYGLDV
                     ILSDGQPYVVDASSFPGFKGVPDAPVHLANYIYSMVGRVLNYPLHVGGGAVKTEEGEV
                     ACYEGSDHWSWSDWLWLGGAVAAGFRLRGGFRGPYPGHSGPSEPAGAVQSTSGGQ"
BASE COUNT          220 a          335 c          295 g          232 t
ORIGIN      
        1 gctgtccacc agatgtactt tgtactgccc cagccggttc agatggtcca ctatggcctg
       61 ggtacgggcc acgaaaacca cctcgtagcc tgaagcctgc agcaactgcc ccgccaagcc
      121 acagccaatc cgaccaggac caatgatcac tgccttcata gcatgccacc tccccctcct
      181 ctgttttcac tgctccccct cccacatgga gggggtaatt caacacgcgc cctaccatgg
      241 agtatatgta gttggccagg tgcactgggg catcgggtac ccctttgaac ccaggaaagc
      301 tggaagcatc taccacgtag ggttgcccat cgctcaagat aacgtctaac ccatagaggc
      361 tgatcccgaa agcttctcca cagcgccagg ttatctcttg caactccggg ctaaggtcaa
      421 agggctcacc tagcttttcc tggtacgttc gcgctggcca gacccttttg accccaaaag
      481 tctggtcgcc aatgcggtaa atcttgaggt cgggtccgtg gggtttatgg taacgctggg
      541 cgaacaccgg atccggaccg aggaccaact ggctcaactc atcgggctgc gaaatcacct
      601 ggatgcccct tccctgggag ccacggtagg gcttgacgat cagcggtccc tggtctaaga
      661 gggggactaa ctgctctgcg tgggctgtta cataagtctc gggtactggc attccagctg
      721 cctgtaaggc ccgggtggcg acgatcttgt cccgcatgag gagggcggct ccagccacgt
      781 ggagcgctcc ccccaggcac aacgccagct ccgtccctga cttcaggacg tacaggtcat
      841 ggtccacctg gacacggtca aggtcggtga gctgctcctc agggtagatt gggtctacag
      901 ttgctcccca ctccgaaagc aagcggatca cttccggcat gattgggctc tcgcggtccg
      961 gcgggtggcg aaacatgatc aggccaattc tcattgctct cacccctctc tggtctgttg
     1021 gataacgtaa tcggccagtc gttcgttggc attgggcacg ccagtataat tgggaaactc
     1081 at
//
LOCUS       DASQSL010000669         1012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_142451, whole genome shotgun sequence.
ACCESSION   DASQSL010000669 DASQSL010000000
VERSION     DASQSL010000669.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142451"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(308..433)
                     /locus_tag="VE844_06885"
     CDS             complement(308..433)
                     /locus_tag="VE844_06885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01082.1"
                     /translation="MERLERIKAVVRAGMAFLEDRAKGLKLKDLLNLGTTGGKLP"
     gene            complement(433..663)
                     /locus_tag="VE844_06890"
     CDS             complement(433..663)
                     /locus_tag="VE844_06890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01083.1"
                     /translation="MTLADDDLIHGARICVRHADGGERMHQAIHCPLCGAPITAHYEL
                     FAHVHYVSTLWAPRTSPATRRPRLTCRPRSAS"
BASE COUNT          198 a          298 c          308 g          208 t
ORIGIN      
        1 tacaatctcg agggcgtgcg ctggcgggac cagcagacgg aggccagtga gacccatgac
       61 atccgccacg tcttcgtcat gaccggggcc gtgccgaaca cccgctggct tgaggggtca
      121 tggttacaga actcagccgt ctggggcggc tgatgaatct cctgcccatc ttgcacctat
      181 tgcttgacac aggctacagt gatccaagaa aataatcccg gtatttggac tccggaaagc
      241 cgagatcctg tgtggcgtct acgtccagaa aaaccccgga atctttagtt gcatcactgt
      301 agccgtctca tggcagcttc ccgcccgtag tccctaggtt gagaaggtcc ttaagcttca
      361 agcccttcgc ccgatcttcg aggaacgcca tccccgcgcg cacgaccgcc ttgattcgct
      421 ccaagcgctc catcaacttg cgcttctcgg cctgcaggtc agacgcgggc ggcgggtcgc
      481 cggggaggtc cgcggggccc agagggtcga gacgtagtgg acgtgggcaa acagctcata
      541 gtgcgcggtg atgggcgctc cgcagagggg gcagtggatc gcctggtgca tgcgctcccc
      601 cccgtcagca tggcggacgc agatgcgcgc cccatggatg agatcatcat ctgccagtgt
      661 cacgtcgctg gtcttcatga cgcaattgcg tgatggctag ataactatgc gcttcggccc
      721 tgttttcgtc atgaaagtac ttttggagct tgcccaacct attgcaaacc aggcagtaag
      781 ccgatgctgc gcagctctgg attgtagggc aactcagtgg aaaagacggc ggaagttgcg
      841 gagggcctca tgtgcgtcgc cgggcttaca gagcttaacg gagatgttcg gtgggatgta
      901 cctagtaccc caagcaccca tgactctcgc ctgaggtccg ggagacctga cctgtgccgc
      961 tgtctctact ccacgctcag ctgtgagagc atggcgatcc cgtcagggta gg
//
LOCUS       DASQSL010000670         1286 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_142469, whole genome shotgun sequence.
ACCESSION   DASQSL010000670 DASQSL010000000
VERSION     DASQSL010000670.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142469"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(339..531)
                     /locus_tag="VE844_06895"
                     /pseudo
     CDS             complement(339..531)
                     /locus_tag="VE844_06895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012628063.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
     gene            complement(619..>1286)
                     /locus_tag="VE844_06900"
     CDS             complement(619..>1286)
                     /locus_tag="VE844_06900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011628202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HZC01084.1"
                     /translation="VLIPKWRQVTVFEGEHVERGEVVVDGATDPHDILRLKGVHALTH
                     YFVNEVQDVYRLQGVKINDKHIEVIIRQMLRKVEIGDPGDTSFLQGEQVDRERVLEQN
                     EKMEKEGKQPAQWQQLLLGITKASLATESFISAASFQETTRVLTEAAVTGKKDELRGL
                     KENVIMGRLIPAGTGFASHSARRKVGQPPHAVTPDLREFERAQLEPEAYREAVLEEQS
                     RSA"
BASE COUNT          239 a          395 c          365 g          287 t
ORIGIN      
        1 gttcagtggc cgttttggag gtacggaggc gtgcacgcgc gcgagcgggc ttaggccagg
       61 cctggtgaaa gaccggcgtg gtcgagaagg aaggttcggg gccgctcagt ggggcggccc
      121 tcgcgcaggg gatgggcagg ggtgggaggc atacgtccct gcattggccg gcggtatcct
      181 tgccgctccg acgcctgtgg cgttgaggaa tagagatgta gtccggatga agcgaaacgg
      241 aatccggaaa aagcttattc ccttggtccc agcttccacc tcgtttcatc cgggctactt
      301 gcttaccgat tttctaacct cgagttgcgg aagtcggatt agaaccgctt gtcaatgccc
      361 gcctgcttca gcgccgcgtt cgcggtatgc cgcgacttga tcaccgcatc gacttgggaa
      421 ccttttccca gtgattgggc tgtaccagat ctcgtgatcg cctcgccccc tctgtacata
      481 aatgaattcc acacacgacg cctcggcaat gccgccgact gtctccacca tgctacggcc
      541 ctatgaaccc atcgccaccc ttcccgtgcg ggtcgaaaac ggcgtcgtgc aggtccggga
      601 cagccgctag gactgagttt acgcgctccg gctctgctcc tcgagcacag cctcgcgata
      661 agcctccggc tcgagctgtg ctcgctcaaa ttccctcaga tcgggcgtca cggcgtgcgg
      721 tggctgaccg accttgcggc gagcagaatg agaggcgaaa cctgtaccgg ccggtatgag
      781 ccggcccatg atcacgttct cctttaatcc tcgcagttca tcctttttac ctgtgaccgc
      841 agcctctgtc agcacccgcg tggtttcctg gaaggaggcg gcagagatga acgattccgt
      901 agccaaggag gccttggtga tacccaacag caactgctgc cattgcgccg gctgcttacc
      961 ttccttctcc atcttttcgt tctgttccaa gacccgctct ctatcgacct gttcgccttg
     1021 caggaaggag gtatcgccgg gatcgccgat ctcgacctta cgcaacatct gccggataat
     1081 gacctcgatg tgcttatcgt tgatcttgac cccctgtaag cggtagacgt cctggacctc
     1141 attgacaaaa tagtgcgtca aggcatgtac gcccttaaga cgcaggatgt catgcggatc
     1201 ggtggctcca tcgacgacca cctcgccgcg ttccacatgc tcgccctcaa atacggtgac
     1261 ttggcgccat ttggggatca atacct
//
LOCUS       DASQSL010000671         1972 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_100570, whole genome shotgun sequence.
ACCESSION   DASQSL010000671 DASQSL010000000
VERSION     DASQSL010000671.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1972)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1972)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1972
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100570"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(107..1153)
                     /locus_tag="VE844_06905"
     CDS             complement(107..1153)
                     /locus_tag="VE844_06905"
                     /inference="COORDINATES: protein motif:HMM:NF016214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HZC01085.1"
                     /translation="MDTLTHALSGALLARITAPRATRPDLPSVGARMLAGFFAAAFPD
                     IDFALRLIDTLTYLNAHQGITHSIVLLPVWGFIVAWILAHLMPRYPWQAFYGVALLGL
                     GVHIAEDVITAYGTQLLAPLSDWRYAIPLSFVIDPYFTGILIMGFAALFIWPKRRLAS
                     ILSLLSLIAYIGLQAVLRERALEFGANYANSQGLDSAVSVALPQPLSPFRWKVIVRQG
                     SRYHEALIDLDGQPPAKSPFIPKTWIGKLAAFYEPQATVIWQQHARFGNEHEPLVHSA
                     WAAPALAPFRRFAQFSVFDHLERRGKAICVWFVDLRFTLPGMTPSFRYGACRGDRDDG
                     NWRLARFKGAFFID"
     gene            complement(1205..1843)
                     /locus_tag="VE844_06910"
     CDS             complement(1205..1843)
                     /locus_tag="VE844_06910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013646885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HZC01086.1"
                     /translation="MPYGPEINKRPAGLTADRIVDTALALAEQRSWEAMRLYDVAVAV
                     GITLDDIRHDFREKEDLVDAWFDRADQAMLKAAEQPEFLSLPTRQRLHRLIMTWLGAL
                     APHRRVTRQMILGKLEPGHIHIQIPAILRISRTVQWMREAAHRDPVYLRRALEEAGLT
                     TIYLMTFCYWLQDDSPDSIRTREFLERRLAMAETLSHWVFGWCPRQLAGARP"
BASE COUNT          466 a          556 c          578 g          372 t
ORIGIN      
        1 acgcgaggat cgcccagagc agggtgatag cgccgagaag aaaggttacc atagatttaa
       61 agccaaggga gtggatatat taaaccgcca cctctcgaat gtgtcctcaa tcgatgaaga
      121 acgcgccttt aaagcgcgcc agacgccagt ttccatcatc cctatccccc cggcaagccc
      181 catagcggaa cgaaggggtc attcccggca aggtaaagcg cagatcgacg aaccaaacgc
      241 agatcgcttt tcctcgccgc tctaaatgat cgaacacaga aaactgcgca aaccgccgga
      301 aaggcgctaa ggccggcgct gcccaggcac tgtgcacgag cggttcatgc tcattaccaa
      361 agcgggcatg ctgttgccag atcacggtgg cttgcggttc atagaaggcg gcgagtttgc
      421 cgatccaggt tttcgggata aagggtgatt tagcgggggg ctgaccatcg aggtcgatca
      481 gcgcctcatg gtagcggcta ccctggcgca cgataacctt ccagcgaaac ggtgataaag
      541 gctgtggcaa ggctacgctc accgcactat ccaaaccctg gctgttagca tagttcgcgc
      601 caaactccag cgcacgctcg cgcagcaccg cttgcagacc gatgtaggct attaagctca
      661 gtaggctcaa aatagaggcg agccgccgtt tcggccaaat aaagagagcg gcgaaaccca
      721 taatgaggat cccggtaaaa tagggatcga tgacaaagct gagcggtatg gcatagcgcc
      781 aatccgagag cggcgcgagc aactgggtgc cgtaggcggt gatcacatcc tcggcgatat
      841 gaaccccaag cccaagcaga gcgacaccgt aaaaggcttg ccagggataa cgcggcatca
      901 agtgggccag aatccacgca acgataaatc cccagaccgg caaaagcact atggaatgcg
      961 tgatcccttg atgggcattg agataggtca aggtatcgat aaggcgtagg gcgaaatcga
     1021 tatcgggaaa ggccgcggca aaaaagcctg cgagcatgcg cgcccctacg ctaggcaaat
     1081 cagggcgggt tgcccttggc gcagtgatcc gcgcgagcaa tgcgccgctc agagcatggg
     1141 taagggtatc cactatttcg gtcgcggcgt ttgcttgtgt cttcctcgac agctcggatc
     1201 ggtattacgg ccgggcaccg gccagctgcc gcgggcacca tccaaacacc cagtgggaca
     1261 gggtctccgc catagccagg cgccgctcca gaaattctcg ggtgcggatt gagtcgggtg
     1321 aatcatcctg cagccagtaa cagaaggtca taagatagat cgtcgtaaga ccggcctctt
     1381 cgagcgcgcg tctgagatag acggggtctc ggtgggcagc ctcgcgcatc cactgcaccg
     1441 tgcggctgat gcgcaggatc gccgggatct ggatatgtat atggccgggc tcgagcttgc
     1501 cgaggatcat ctgccgcgtc acccggcggt gcggagccaa tgcccccaac caggtcataa
     1561 taagccggtg caaacgctgg cgggtaggca ggctaagaaa ctccggttgc tctgccgctt
     1621 tcaacatcgc ctgatcggcg cgatcgaacc acgcatccac cagatcctct ttctcccgga
     1681 agtcatggcg tatgtcatca agggtaatac ccacggctac cgccacatcg tagaggcgca
     1741 tcgcctccca tgagcgctgt tcggcgagcg ccagggcagt atcgacgatc cggtcagcgg
     1801 tcaggccggc cggccgtttg ttgatttcag gtccatatgg catagaaagc ctccagttta
     1861 gccaggtcca ggtggcttcg cgagcgctca agccaccgta tgttttgttt tgaatcttta
     1921 ctgtctgtag attagattat agccctagtg cagattcagg cgaccttttt tg
//
LOCUS       DASQSL010000672         1432 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_142474, whole genome shotgun sequence.
ACCESSION   DASQSL010000672 DASQSL010000000
VERSION     DASQSL010000672.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1432
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142474"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1432)
                     /locus_tag="VE844_06915"
     rRNA            complement(<1..>1432)
                     /locus_tag="VE844_06915"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          263 a          457 c          346 g          366 t
ORIGIN      
        1 cagtaaagct ccacggggtc tttttgccct gccgcgggta acctgcatct tcacaggtat
       61 ttcaatttcg ccggatccct cgttgagaca gcgcccagat cgttacgcca ttcgtgcggg
      121 tcggaactta cccgacaagg aatttcgcta ccttagtacc gttatagtta cggcagccgt
      181 ttaccggggc ttcaattcag agcttgcacc cctcctctta accttccggc actgggcagg
      241 cgtcagcccc tatacgtcag ctttcgcttt agcagagacc tgtgtttttg ctaaacagtc
      301 gcctgggccg tttcactgcg gcctcgatca gcctctcacg caaggtgagt actgcgaggc
      361 accccttctc ccgaagttac ggggtcaatt tgccgagttc cttaacgagg gttcttccga
      421 tcgccttggt atgctctacc cgtctacctg cgtcggtttg cggtacggtc gcctttgatc
      481 tcgctagacg cttatcttgc aggatcggct cagtcgaatc agctttcgcc tttcattcgc
      541 ttctcggagt tgatgagagg acggatttgc ctgtcctctc cccctaccag cttagacgca
      601 catagccaaa agtgcgctca acctaccgtt cccggtcacg ccttcgctct caagctcgct
      661 tctcgccggc tgccttgacg gcaaagccgc ctcagcgcac cggcatccac gagcaaggca
      721 ccttgcggtg caaacggtct cgggtggtat cggaatatca accgattgtc catcgcctac
      781 ggctttcgcc ctcggcttag gcccgactaa ccctgagcgg attaaccttc ctcaggaaac
      841 cttagacata cggcgtgcgc gtttctcacg cgcatttcgc tactcatgcc ggcattcgca
      901 cttccgtcca ctccagccgt cctcacggtc gaccttcact gctgacggaa cgctccccta
      961 ccaccgtcgc gaacccgaag gtacgcaacg atccgaagct tcggtatcag acttgagccc
     1021 cgttggatct tcggcgcgga atcacttgac cagtgagcta ttacgcactc tttaaatggt
     1081 ggctgcttct gagccaacat cctggttgtc tgagcaactc cacatccttc cccacttagt
     1141 ctggattttg ggaccttagc tgtcggtctg gactgttttc cttttgacca cgaagcttag
     1201 ccctcgcagt ctgactcccg gggtatgtga atcgtgggat tcggagtttg attgggtttg
     1261 gtaagcggga agccccctag cccattcagt gctctaccct cacgactgaa cccccgaggc
     1321 tagccctaaa gctatttcgg ggagaaccag ctatctccga gttcgattgg catttcaccg
     1381 ctacccacag gtcatcccct agcttttcaa cgctagtggg ttcggtcctc ca
//
LOCUS       DASQSL010000673         1210 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_100577, whole genome shotgun sequence.
ACCESSION   DASQSL010000673 DASQSL010000000
VERSION     DASQSL010000673.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1210
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100577"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..242
                     /locus_tag="VE844_06920"
     CDS             <1..242
                     /locus_tag="VE844_06920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008588750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HZC01087.1"
                     /translation="DGPMLQVHGSSNLIQTLLANDLVDEFWLKVFPVTLGKGKRLFGE
                     GTIPAAFTLTDSKISPSGVIIASYRRDGEVKLGSF"
     gene            422..847
                     /locus_tag="VE844_06925"
     CDS             422..847
                     /locus_tag="VE844_06925"
                     /inference="COORDINATES: protein motif:HMM:NF025292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin-like domain-containing protein"
                     /protein_id="HZC01088.1"
                     /translation="MTSNPLVGTWRLISWENRGLDGEVVYPLGEDAVGYIMYTPDGYM
                     FVAIMRSDRAKFAAEDLLSGSMEEKAYAAGTYVSYCGRYEFRGDTVIHHVELSLFPNW
                     VGVEQERLIEVRGDRLTISTRPMLFGGAQRSAHLIWERV"
     gene            complement(908..>1210)
                     /locus_tag="VE844_06930"
     CDS             complement(908..>1210)
                     /locus_tag="VE844_06930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01089.1"
                     /translation="ERGYVSSRKLHMGCKAAVCRTPFGARIVAGRRALKEPQYAWDYA
                     SVRLAEKALVYAEFSTHPRDGIIGVDDLERDSYPAAEPPDYLRRWRYTTEGRMERF"
BASE COUNT          261 a          332 c          346 g          271 t
ORIGIN      
        1 aagatggccc gatgctgcag gtacacggaa gcagtaatct tattcagacg ttattggcaa
       61 atgatctggt cgacgagttt tggttaaagg tattccctgt tacgcttggt aagggcaaac
      121 ggttatttgg cgaggggacc atacccgcag ccttcacact tacggactca aagatatcac
      181 cgagcggcgt gattattgct tcttatagaa gagatggcga agtcaagcta ggctcttttt
      241 gacctagagt cttctctgtc ccatcaacca ataagagagc cgtttacgac actaactaca
      301 ctagggcctg tctgaagaat catttcgaga gctccggaac ctcccacagt agccacctga
      361 ccacacgcga agatagtgga gcattgtagt gacggaaagt gttggacctg gagagataga
      421 catgacatcc aatcctctcg ttggcacgtg gaggctcata tcctgggaga acaggggcct
      481 cgacggtgag gtcgtctacc cgctcggaga ggatgccgtg ggatacatca tgtacacccc
      541 cgacggatac atgttcgtag ccatcatgcg ctctgaccgt gcgaagtttg ccgcggaaga
      601 tcttctcagc gggagtatgg aggagaaagc atacgccgcc ggcacctacg tctcatattg
      661 cggccggtac gagtttcggg gagacacggt catccatcac gtggagctca gcttgtttcc
      721 caactgggtt ggtgtcgagc aggaacgtct gatcgaagtt agaggggatc gattgacgat
      781 tagcacacgt ccgatgttgt tcgggggcgc acaacggagt gcccacctta tctgggagcg
      841 tgtctgaaca ctctcggagt tgcaggctgc tgtaggcgga gtgcatagcc tctccggcta
      901 catcccatca gaacctctcc attcgccctt cggtcgtgta cctccacctg cgtaagtagt
      961 ccgggggttc cgctgccgga taggagtcac gctcgagatc atcgacgccg atgatgccgt
     1021 ccctcgggtg agtgctgaac tcggcgtaga caagggcctt ctccgccagc cggacgctgg
     1081 catagtccca ggcgtactgc ggttctttca gagcccgtct ccccgccacg atcctggccc
     1141 cgaacggagt ccggcagacg gccgctttgc agcccatgtg gagtttcctg ctgctcacgt
     1201 agccccgctc
//
LOCUS       DASQSL010000674         1066 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_73830, whole genome shotgun sequence.
ACCESSION   DASQSL010000674 DASQSL010000000
VERSION     DASQSL010000674.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1066
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73830"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1066
                     /locus_tag="VE844_06935"
     CDS             <1..>1066
                     /locus_tag="VE844_06935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011682697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydratase activase-related protein"
                     /protein_id="HZC01090.1"
                     /translation="NMYSQTPVFSAYFEALGVKAENIIYSDYTSEQLYKEGAKRGAID
                     PCFPSKVGIPHVHNLLYVHHKKNPLDFIFFPMIDSLTTDLHGVQDSRACPTVTATPEA
                     VKAAFIKEGDLFAEMGVKYFPTFVRLTEPQLFARQMFEQFKDIFGLSEEENWRAVQEG
                     YKALDHYNNVILRGTAREVLNQLVAEQRLGIVLLARPYHHDPGVNHEILEEFQKQGYP
                     VFAQDSLPIDPDTLEQLFGEEVRAGIINHPMDVSDVWKNSYSENTSRKVWAAKYVARH
                     PNLVALELSSFKCGHDAPIYSVVEEIVEDSGTPYFCFKDIDENKPTGSIKIRVETISY
                     FLKRYREDMVARKTKQISIEE"
BASE COUNT          241 a          303 c          313 g          209 t
ORIGIN      
        1 aacatgtact cgcaaacccc cgtcttcagc gcctatttcg aggcgttggg ggtcaaggcg
       61 gagaacatta tctactccga ctacacctcc gagcaactct acaaagaagg ggccaaacgc
      121 ggcgccattg acccctgctt cccgagtaag gtcggcatcc cccacgtgca taatttgctc
      181 tatgtgcatc acaagaaaaa cccgctggat ttcatcttct ttccgatgat cgattcgctc
      241 accacggacc tgcatggcgt ccaagatagc cgcgcctgtc cgacggtgac ggcgaccccg
      301 gaggcggtca aagcggcctt tatcaaagag ggggacctgt ttgccgagat gggagtgaag
      361 tacttcccca cctttgtcag gctgaccgag ccccagctct ttgcccggca gatgttcgag
      421 caattcaagg acattttcgg cctgtccgag gaggagaact ggcgggcagt ccaggaaggc
      481 tataaggcgc tggatcacta caacaatgtg atcctgcgcg gcacggcgcg tgaggtgttg
      541 aaccagcttg tggcagagca gcggctgggg atcgtgttgc tggcccggcc ctatcaccat
      601 gatccggggg tcaaccacga gatcttggag gagttccaga agcagggcta cccggtgttt
      661 gcccaggatt cgctgcccat cgaccctgac accctggagc agttgttcgg cgaggaggtc
      721 cgagccggga tcatcaatca tccgatggac gtctcggacg tctggaaaaa ttcgtacagc
      781 gagaacacca gccgcaaggt ctgggcggcc aagtatgtgg cgcggcatcc caacctggtg
      841 gcactggagc tttcgtcctt caagtgcggg cacgacgcgc ccatctattc ggtggtggag
      901 gagatcgtcg aggactccgg gacgccgtat ttctgcttta aagacatcga cgaaaacaaa
      961 cccaccggat cgatcaaaat ccgcgtcgag acgatcagct acttcctgaa gcgctaccgt
     1021 gaggacatgg tggcgaggaa gaccaagcag atcagtattg aggagc
//
LOCUS       DASQSL010000675         3579 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_5566, whole genome shotgun sequence.
ACCESSION   DASQSL010000675 DASQSL010000000
VERSION     DASQSL010000675.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3579
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5566"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(153..374)
                     /locus_tag="VE844_06940"
     CDS             complement(153..374)
                     /locus_tag="VE844_06940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017928217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3072 domain-containing protein"
                     /protein_id="HZC01091.1"
                     /translation="MTDKQTQEQAPKGNMLKDPDQWTTGEEPMTGAQRSYLKTLSEEA
                     GEPFDEHLTKAQASKRIEELQQKAGRGVD"
     gene            complement(694..1161)
                     /locus_tag="VE844_06945"
     CDS             complement(694..1161)
                     /locus_tag="VE844_06945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020481907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HZC01092.1"
                     /translation="MSEVLVGIISDTHGLVRLEAVRALKGSELLIHAGDIGNPQVIEQ
                     LHEIAPTFVVRGNNDRGAWAAGLPVTQVVEVGELLFYVLHEISQLDVDPAVAGFAAVV
                     SGHSHQPSIQFRDGVLYLNPGSAGPRRFSLPVAVARVHVSGRQMRPEIVELRV"
     gene            complement(1361..2575)
                     /locus_tag="VE844_06950"
     CDS             complement(1361..2575)
                     /locus_tag="VE844_06950"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009788130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004024 - alcohol dehydrogenase activity,
                     zinc-dependent [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase"
                     /protein_id="HZC01093.1"
                     /translation="MKAVVFYGIGDIRLEDVPEPKIQEPSDAIVRLTASAICGTDLHM
                     VRGTMTGMKPGRILGHEGVGIIEEIGPNVRNLKMGDRVVIPSTIGCGVCSYCRDGYYA
                     QCDKANPNGPQAGTAFFGGPQMSGPFNGLQAERARIPYANVGLVKLPDEVSDDQAILL
                     SDIFPTAYFGAELAEIEDGDTVAVFGCGPVGQFAIASAKLLGAGRIFAVDSIPSRLEM
                     ARDQGAEIINFEQEDPIEAIRGLTGGIGIDRAIDAVGIDAVHPHQGPAAQKAKQQEQE
                     FKEELQKIAPETHPQGDNWHPGDAPSQALMWAVEAVAKAGTLSIIGVYPPTMQVFPIG
                     KAMNKNLTIKMGNCNHRRYIPQLVDMVRSGVIDPMIVLTQQEPLTSVIDAYKAFDTRQ
                     PGWVKVELKPSA"
     gene            complement(2941..3366)
                     /locus_tag="VE844_06955"
     CDS             complement(2941..3366)
                     /locus_tag="VE844_06955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013034087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2267 domain-containing protein"
                     /protein_id="HZC01094.1"
                     /translation="MNSIGVDVFDTTLQKTSVWLNGVMEEMGWEDRHRAYSVLRAVLH
                     ALRDRLIVDEAVNLGAQLPMLIRGFYYEGWRPEGRPFKYRHKEEFFAQVAKTLPGMEQ
                     AELERAVRAVFKVLSSQVTGGEIAQVRDQLPAEVRELWS"
     gene            complement(3396..>3579)
                     /locus_tag="VE844_06960"
     CDS             complement(3396..>3579)
                     /locus_tag="VE844_06960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01095.1"
                     /translation="AHAADGPERAEPSVSALGNEDLCGRQPNRPQLMRLSLGVSKERR
                     FRVSSPAEENKAHEAG"
BASE COUNT          779 a         1061 c          915 g          824 t
ORIGIN      
        1 gacgcgattc atacggatca ccagcaaaga ccgaacgcgg ttcagggcag agagcaacaa
       61 gacgtgggaa caagtcaaac gcaaccaccg gcgggagggt gacattgaag ccctctacgc
      121 tctccgtgtt cagctatgtt gcatccgtgc tgctaatcga cgccccgccc ggccttctgt
      181 tgtaattcct cgatgcgttt cgacgcttgc gctttggtga gatgctcatc gaagggctcg
      241 ccggcctcct cggaaagcgt cttgagatag gagcgctgcg cgccagtcat gggctcttcg
      301 ccggtggtcc attggtcggg gtctttgagc atgttgccct ttggggcctg ttcttgggtc
      361 tgcttatcgg tcatggtatt acctgctacc tagtcagaga acgggtgcct acaaagtcac
      421 ggacacctct aacagtggac agaccgcgga cctcagagtt cttaggagcg tccattcagc
      481 cgcggcggta taggtataag agaggggtac cccttgaagc agtcatcatt ccatagggta
      541 tggcgcgtgg tgcctcctcg gtggcaggct cagcgaccct cgagctcgaa agagatcttc
      601 gcgttgacac gatagtaggt gatccgatcg ttgtcgacgg tcgcttccag cccgccaccg
      661 cgcagaagaa cttccgtacg cgcagttgga gtctcacacc cgtagctcta ctatctcggg
      721 ccgcatctgg cgccccgaca cgtgaacccg ggcgacagcc accggaaggc tgaaccgccg
      781 aggacccgca ctacccggat tgaggtagag gaccccgtcg cgaaactgga tcgagggctg
      841 atgcgagtga cccgacacca cagcggcgaa gccagcgacc gccgggtcga cgtcaagctg
      901 ggaaatctcg tgcagcacgt agaacaggag ttcgccaacc tcgaccacct gtgtgactgg
      961 aagacccgct gcccacgccc ccctgtcgtt attgcctcgg accacgaaag tcggagcgat
     1021 ctcatgcagc tgctcgatca cctggggatt gccgatgtcc ccagcgtgga tgagaagctc
     1081 ggaccccttg agagccctga cagcctcaag tcgaaccaga ccgtgtgtat ccgagatgat
     1141 gcccacaaga acttcgctca tggctccgca gagacctcaa gccgcctaac gctgcgtatc
     1201 acccggcccg cgtgtgacat tcagaggaac catactagac tcgcttcgcg ggctcgggtg
     1261 catgctgaag ttggatgcgg tcacctgtcg caatttgagt atcctgttct actgctcctg
     1321 ctttggaagc agtaaactac tgagattagg agcaggttgc ctaagcagaa ggcttgagtt
     1381 ccactttaac ccatcccggc tgacgggtat caaaagcctt gtaggcatca attactgagg
     1441 taagcggctc ttgttgggtg agcacgatca tgggatcgat gacaccgctt ctaaccatat
     1501 cgaccagttg tgggatatat cttcggtgat tgcaattgcc cattttgatc gtgaggtttt
     1561 tattcatcgc cttaccaata gggaatacct gcatggttgg cggataaacg ccaatgatgg
     1621 aaagggtgcc ggcctttgcc actgcctcga cagcccacat taatgcttga gacggcgcat
     1681 cgccaggatg ccagttatct ccctggggat gagtttccgg agcgatcttc tgaagctcct
     1741 ccttgaattc ctgttcttgc tgcttcgctt tttgcgcggc cgggccttgg tgaggatgga
     1801 cagcatcaat gccgactgca tcaatggcac gatcaatacc gatgccgcct gtcaggcccc
     1861 ggattgcctc gatcggatcc tcctgctcaa aattaattat ctctgccccc tgatcacggg
     1921 ccatctctag acgcgaggga atcgaatcga ccgcaaaaat acggccagcg cccaacaatt
     1981 tggcacttgc tattgcaaat tgaccaacag gtccgcagcc aaaaaccgct accgtatctc
     2041 cgtcctctat ctcagcaagc tccgccccga aataagccgt cggaaagata tccgatagca
     2101 gaatcgcttg atcatcactg acttcatcag ggagcttcac gagtcccaca ttggcgtaag
     2161 ggatgcgagc gcgctcggcc tgcaatccat taaatggccc actcatctga ggtccgccaa
     2221 aaaatgcggt ccctgcttgt ggcccattcg ggttggcttt atcacattgc gcgtagtaac
     2281 catcgcggca gtaggagcag acgccgcagc cgatggtgga aggaatcaca acgcggtccc
     2341 ccatcttaag gttacgcacg tttggcccga tctcctcaat aatcccgacc ccctcatgtc
     2401 caaggatcct ccccggtttc atgccagtca tcgtgcctcg caccatgtga aggtccgtgc
     2461 cgcaaatagc gctcgccgtt aaccgcacaa tcgcatcact cggctcttgt atcttaggtt
     2521 ctggaacgtc ttccaaacgg atatcaccaa tcccataaaa aactactgct ttcattggta
     2581 cctcctccgc aattcgttga atcacttgtt gggaaatgtg atggcattaa acaatgccca
     2641 ttttttcaac acatgactgc actttgctgc aactatgttc cgatgctatc agataatctg
     2701 tgcctgctgc gtttgcgttt tggtctacgc catcaatttt caggatttgc tggttgaacg
     2761 ctggagtata ccgcacgcgg gacaggatga aactgagaca ctgagactac gctgaaattg
     2821 ggcgtgaaaa cgttcgcaca atcctctcag cgtccgatca ggagcttgtt ccagtaacgc
     2881 tgttgcaggc gcttggctta gcgtacgttt tgattctatt gatagtggaa acccaacccc
     2941 tcaactccag agctcgcgga cctctgccgg caattgatct cttacctgag ctatttcacc
     3001 cccggtgacc tggctggaca acaccttgaa taccgctcga actgctcttt ctaactcagc
     3061 ttgctccata cccggcaggg ttttcgcaac ttgcgcgaaa aactcctcct tgtgccgata
     3121 cttaaatggc ctgccttctg gccgccagcc ttcgtaatag aatccccgga tgagcatggg
     3181 aagctgtgcc cctaagttga ccgcttcatc gactatcagg cgatcacgga gcgcatgcaa
     3241 aacggcccgc aagaccgaat aggccctatg gcgatcctcc cagcccattt cctccatcac
     3301 gccattcaac catacagagg ttttctgtaa ggtggtatca aagacgtcta ctccaatgga
     3361 attcatgatg tacctccaag tttgttgtta acccctcacc ctgcctcgtg agctttgttc
     3421 tcctccgccg ggcttgaaac tctgaatctc ctctctttgc tgacgcccaa cgataggcgc
     3481 atcagctgcg ggcgattcgg ctggcgcccg cacaaatctt cattccctag cgcactcacg
     3541 gaaggttccg cccgctccgg cccgtcggct gcatgcgcg
//
LOCUS       DASQSL010000676         1059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_142526, whole genome shotgun sequence.
ACCESSION   DASQSL010000676 DASQSL010000000
VERSION     DASQSL010000676.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142526"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(217..441)
                     /locus_tag="VE844_06965"
     CDS             complement(217..441)
                     /locus_tag="VE844_06965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01096.1"
                     /translation="MAGVRNPSIHNALLDLLGKPSAECSAMCIPTAMYGHPYVPPAST
                     WQFTSGREPENRMVDRGWKSMGVQPSHYDA"
     gene            complement(511..>1059)
                     /locus_tag="VE844_06970"
     CDS             complement(511..>1059)
                     /locus_tag="VE844_06970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020463260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HZC01097.1"
                     /translation="RYSINVTLDGCCDHRTQLTDDALHRYWAERLAQADALLFGRVTY
                     AMMEAAWRLPAHTSEPPDGMPDWMVPFARTIDAAKKYVVSRTLERVDWNAELVRGDLR
                     EAVQHLKQEPGNGLFVGGLTLPRALAAMGLIDAYEFVVHPMIAGHGPTLFAGLPKHLD
                     LRLVHRREFGSGAVAMRYEPAS"
BASE COUNT          219 a          329 c          298 g          213 t
ORIGIN      
        1 cctgtggcac cctgttggag aaatatcctg ccaggcaaag tccagctata tgggacacat
       61 catggccctg tgccactctt ggtgatcctg atctggcaca tgtttgtaca gccgttggca
      121 aggaatattg cctaatgcac ctcgtgcgat gagctatagc cttggatcaa gcgatactgc
      181 aggggacaat cttgccaagc cctgtgcaag tatgtgtcag gcatcataat gcgagggctg
      241 cacgcccatg gatttccacc cccgatcgac catacggttt tctggttcgc gtccgctggt
      301 gaactgccag gtagaggcag ggggaacgta gggatgtccg tacatcgcgg tgggaatgca
      361 catggcgctg cactcagcac taggtttccc cagcaggtcg agcagcgcat tgtggatgct
      421 ggggttcctg acgccagcca aggtgagcag ctactgcaag ctgttccgcc ttgctggtgg
      481 aacgggagcc gcaaggctca gcgtgtcccg ttagcttgct ggctcatacc gcatcgccac
      541 cgcccccgaa ccaaactccc gccgatgaac aagcctcaag tcgagatgct tcggtagacc
      601 cgcgaacaac gtcggtccgt ggccagctat catggggtgg acgacgaact cgtacgcatc
      661 gatcaatccc attgccgcca acgctcgtgg gagcgtcagc ccacccacga agagcccatt
      721 ccccggctcc tgcttgaggt gctgaacggc ctcccgcaga tcgccgcgca ccagttcggc
      781 gttccaatcc acccgctcga gggtacgcga aacgacgtac ttctttgccg catcgatcgt
      841 ccgcgcaaac ggcaccatcc aatcgggcat cccatcaggt ggctcgctcg tgtgcgctgg
      901 cagccgccac gctgcttcca tcattgcgta ggtcacccga ccaaaaagca gggcatcggc
      961 ctgcgcgagg cgttcagccc agtagcgatg caatgcatcg tccgtgagtt gcgtgcgatg
     1021 atcgcaacat ccatccaatg tgacattgat cgaataccg
//
LOCUS       DASQSL010000677         1251 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_19532, whole genome shotgun sequence.
ACCESSION   DASQSL010000677 DASQSL010000000
VERSION     DASQSL010000677.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1251
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19532"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1188
                     /locus_tag="VE844_06975"
     CDS             <1..1188
                     /locus_tag="VE844_06975"
                     /inference="COORDINATES: protein motif:HMM:NF014801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY-family carbohydrate kinase"
                     /protein_id="HZC01098.1"
                     /translation="LYRAIAWQCRRTVNLCRELSAHSGLIKSRTGLFLDPYFSAPKIR
                     WILDNVVEARRQVENGEAIFGTVDSWILWNLTGGRVHATDPSNAARTLWFNIHSLDYD
                     DDLLRIFGLPRSLFPQVKDSAGPFGPTAEEVTGRPIPIMGILGDQSASLFAQEGVWEH
                     VVKNTYGTGLFLMTSTGEKVPASGRLVNTIAWKLGERCTYALEGSMLVGGSCLQWLKD
                     QLQLIGSFSEAEKMAASLDFNEGVYFVPALVGLGAPAWDPDARGLFMGLTQNTTRQHL
                     ARAALEAMAYQTRDVMEELKRVVPTHPFRSLRVDGQGARVDLLMQFQADILNMPVERP
                     AFLEATALGAAGVAGLAAGVWTKDEFFRLRKVDRIFIPRMGESTREVLYRGWKKAMAM
                     AAA"
BASE COUNT          245 a          345 c          400 g          261 t
ORIGIN      
        1 ctttatcgcg ccattgcctg gcaatgccgg cggacggtga acctgtgtcg agaattgtct
       61 gctcattcag gactgattaa gagcaggacg gggctgttcc tggatcccta tttctccgca
      121 cccaagatta gatggatcct ggacaatgtg gtggaagcca ggcggcaggt agagaacggg
      181 gaggccatct ttggcacggt ggacagttgg atcctttgga acctcaccgg cgggcgagtc
      241 cacgccacgg acccgagcaa cgccgcgcgc accctgtggt tcaacatcca ttccttggat
      301 tacgacgatg atctcttacg gatcttcggc ttgccgaggt ccctatttcc tcaggtcaag
      361 gacagcgccg ggccgttcgg tcctactgct gaggaggtca ccggccggcc gatcccgatt
      421 atggggatcc tgggcgatca aagtgcgtcc ctgttcgccc aagaaggcgt gtgggagcat
      481 gtggtgaaga acacctatgg aacgggactg tttttgatga cgtcgacggg ggagaaggtc
      541 cccgcttcag ggcggctagt gaacaccatt gcctggaaat tgggcgaaag atgcacctac
      601 gcgctggaag gcagcatgct ggtcggcgga tcgtgtctgc aatggctgaa ggaccaactt
      661 caactcatcg gctccttttc cgaggcagaa aagatggccg cttcattgga ctttaacgaa
      721 ggggtctatt tcgtccccgc cctggtgggg ttgggcgcgc ccgcttggga tcctgacgcc
      781 cggggcctgt tcatgggcct gacacagaac acaacgcgcc agcatctggc acgggccgcc
      841 ttggaagcta tggcctatca aacgcgcgat gtgatggagg aactgaaaag agtggtcccc
      901 acccatccct tccgctctct gcgggtggat gggcaaggcg cacgggttga tcttttgatg
      961 cagttccaag cggacattct caatatgcct gtggaaaggc ctgctttttt agaagccacc
     1021 gctctaggag cggcgggagt ggccggcctc gccgccggtg tctggaccaa ggacgaattc
     1081 ttcaggctga ggaaggtgga ccgtatcttt atcccacgaa tgggggaatc cacccgggag
     1141 gtcctctatc gcggctggaa gaaagccatg gccatggcgg ccgcctaagg cgagcagcgt
     1201 gcgcacctct tggtctgtgg tctgcgcgca gtcgcggccc cgatgatagc g
//
LOCUS       DASQSL010000678         1788 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_194749, whole genome shotgun sequence.
ACCESSION   DASQSL010000678 DASQSL010000000
VERSION     DASQSL010000678.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1788
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194749"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..209
                     /locus_tag="VE844_06980"
     CDS             <1..209
                     /locus_tag="VE844_06980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01099.1"
                     /translation="ICLMIAAKPVQALARQYQQASMTSIGRGFESALAVDSARCEEDG
                     TEIALFVCLGYGGREQVRLEKPPF"
     gene            269..478
                     /locus_tag="VE844_06985"
     CDS             269..478
                     /locus_tag="VE844_06985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014816483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dodecin family protein"
                     /protein_id="HZC01100.1"
                     /translation="MAEASVARITEISAKSTQGFEDAIRIGLSRAQKTLRNVTSAWIK
                     EQRVIVDSDRLSYQVNMEVTFVLDE"
     gene            1123..>1788
                     /locus_tag="VE844_06990"
     CDS             1123..>1788
                     /locus_tag="VE844_06990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01101.1"
                     /translation="MIHSMPIKTLLTTTFDSLVMQLSSLLARGTRLLERFVHAQPTPA
                     TTMAFERELSELLREVGRRIMAWTRNRLEPKADSEAPLRVSFEGRLYRRRRQHPHVVG
                     TFFGPVILWRRLYEPFGHRGRSIHPLELRLGIEAGLATPALAERVGDCATDPTQNEVL
                     ELVQRDHGVSWSCTSLRNLLGCLREGMAPHREGAQVEQVLGWIEQARASKGRFRPTLS
                     VGRD"
BASE COUNT          401 a          493 c          503 g          391 t
ORIGIN      
        1 aaatttgcct gatgatagcg gcaaagccag ttcaagcgct tgcacgccag tatcaacaag
       61 ctagcatgac cagcataggc agaggcttcg agagcgctct agcagtagat tcggcacgct
      121 gtgaggaaga tggtacggaa attgctctct tcgtatgcct aggatatggt ggcagagaac
      181 aagtacgact ggagaagccg cccttctgat atacatggag gcaaaaatca ggaggtatgg
      241 acctgcaacc catgcagagg agtgagacat ggcggaagca agtgttgctc gaatcactga
      301 aatttcagct aagtcaacgc agggttttga agatgccatt cgcattggat tgagtcgggc
      361 tcaaaagaca ctgcgcaacg taacatcagc atggattaag gaacagcggg tcatcgttga
      421 cagtgacagg ctcagctatc aggtcaacat ggaagtcact tttgtcctcg atgaataaca
      481 cccacacagc caaaggaggg ttctatacat ttcaggcccg caaagattcc agcagttacc
      541 ttggcgatcc tattgctcat ggcgtccttt gtattcgcct aggccgtcca aaaatgccgt
      601 ttttgggcta aattccagga ccggtccgtg ggcccggcca tttcccccga agcggctgta
      661 tttactgggt tttttgattc agacaaggcg atccaaaaaa tgggtaatgc tgctaggccg
      721 atttggacgg cctagtattc gcctccagtc atgaagccaa gcagcagagc acggacgcca
      781 tgcaggacca gtccagttcg acgacatctg caacagtggt gacaggtgac aaggatagtg
      841 ggaccttcac cattttgtcc caaagacggt aaactcttag aactccaagc ctctgagctc
      901 gactttatcc atttggtata cgaagtattg tcaataaaca cttgaggttt cgagggtgtg
      961 atcgcgctat tccccgcggc atgcaccgtc cggcagtagg aatcgacgtc gccatgtgag
     1021 cctggcgtct ggtcgtcgtg aatggggttg gctcgaaggg acacttttgg tgaaatgata
     1081 gaagtcttca tctctatcat ttcaccaagt cggagcccct ccatgatcca ttctatgcca
     1141 atcaagaccc tgctgacaac gacctttgac tctctcgtca tgcagctttc gagcttgctc
     1201 gcccggggca cccggctcct tgagcgattt gtccacgcgc aaccaacacc tgcaaccacc
     1261 atggcgtttg aacgcgagct cagcgagctg cttcgcgagg tgggacgacg gatcatggcg
     1321 tggacccgca accgactcga gcccaaagca gacagcgagg ccccgttgcg agtgtcgttc
     1381 gagggccgtc tctatcgccg ccgccgccaa catccgcacg tggtgggcac gttctttggt
     1441 cccgtgatcc tttggcgtcg cctctatgag ccctttgggc atcgaggtcg ctccatccat
     1501 cctctcgagc tgcgcctggg gatcgaagcg ggcttggcca ccccggctct agccgagcgc
     1561 gtgggcgatt gcgccaccga ccccacccaa aacgaggtgc tcgagctggt ccagcgagac
     1621 cacggcgttt cgtggtcatg tacctccctt cgcaacctcc tggggtgtct gcgtgagggg
     1681 atggccccgc atcgagaagg tgcccaggtg gagcaggtgt tgggctggat cgagcaggcc
     1741 cgcgcctcta aggggcgctt tcggccgacc ctatcagttg ggcgcgac
//
LOCUS       DASQSL010000679         2052 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_85721, whole genome shotgun sequence.
ACCESSION   DASQSL010000679 DASQSL010000000
VERSION     DASQSL010000679.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2052
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85721"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..973)
                     /locus_tag="VE844_06995"
     CDS             complement(<1..973)
                     /locus_tag="VE844_06995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011633312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HZC01102.1"
                     /translation="MTNDRVSAWLENLGLGIYRDSFQQNAIDWDVLPELSEGDLEALG
                     VLLGHRKKLLRAIAQLSQSAEVMDREPIPISVVLERQPFPSERNQAERRHLTVMFCDL
                     VDSTPLSRHLDPEDLQEVVRRFLDICSQAIGRFEGYIAKYMGDGMLVYFGYPHAHEND
                     AERAVHSGLAILDAVKALNQDDPNQGFEIAARIGIATGQVVVGEVMGQETAKERSVFG
                     ETPNLAARLQALAKPNLLLIDPATKRLAGNEFEFAEHGTFSLKGFETPVQAWRVLSIR
                     LSASRFEAHRSSQLANFVGREYEVSLLYGRWREAVSGEGQAVLLRGEA"
     gene            complement(1057..1227)
                     /locus_tag="VE844_07000"
     CDS             complement(1057..1227)
                     /locus_tag="VE844_07000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01103.1"
                     /translation="MSNVSKRPFFRRTERWLVGLVMAAMAYMLEKAVLRSIRRGRGKP
                     KPPNKRTDGEER"
     gene            1631..>2052
                     /locus_tag="VE844_07005"
     CDS             1631..>2052
                     /locus_tag="VE844_07005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011955176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HZC01104.1"
                     /translation="MMINGKLVLVSGASSGIGAATAKVMAKAGGRVALLARRKEVLDQ
                     VAAEITSAGGQAWTYSVDLADADAVAAVAKQITEELGTPDIIINNAGAGRWLFVDETS
                     PAEAVQMMAVPYFAAFNVTHAFLPAILGRNSGHIVNISS"
BASE COUNT          472 a          560 c          567 g          453 t
ORIGIN      
        1 cggcctcgcc gcgcaggagc actgcctgtc cttcgccgct gacggcttcg cgccaacgac
       61 cataaaggag tgagacctcg tattccctgc ctacaaagtt ggctaactgg ctggatcgat
      121 gggcttcaaa ccggctggcc gacaacctga tgctcagaac ccgccaggct tggacgggtg
      181 tttcgaaccc tttaagagaa aaggtgccat gctctgcgaa ctcgaattca tttcctgcaa
      241 gacgtttcgt cgcagggtca atgagcagca gattgggttt tgccagcgct tggaggcgag
      301 cagcaagatt aggggtttcg ccgaaaactg acctttcctt ggcggtttcc tgacccatga
      361 cttcgccgac cacgacttgg ccagtggcga tcccaattcg tgcagctatc tcaaaccctt
      421 gattgggatc atcttgatta agcgccttca ccgcatccag aatagccaat ccggaatgta
      481 ccgctcgttc tgcatcgttt tcgtgggcat gggggtaccc aaaatagacc agcatcccat
      541 cccccatgta ttttgctatg tagccctcaa accgaccgat cgcttgactg catatgtcta
      601 aaaaacgtcg gacgacctcc tggagatctt cagggtccaa gtggcgagat aggggtgtcg
      661 agtccaccag atcacaaaac atcacagtca gatggcgacg ttctgcttga tttcgttctg
      721 aagggaatgg ttgcctttct agaacgacgg aaatgggtat aggctccctg tccatcactt
      781 cagcgctctg tgagagctga gcgatagcgc gtaagagttt ttttcgatgt cccagtaaaa
      841 cgcccagcgc ctcgagatcg ccttcactga gctcgggaag tacatcccaa tcgatagcat
      901 tttgctgaaa tgaatcacgg tatatcccga gaccaaggtt ttccagccat gctgatacac
      961 gatcgttcgt catggttaaa ccgtacaaca ggttgccggc aaggtcaaaa aaccggtccc
     1021 ggatgccccc acgtcgacta gagcgaaacg tccgtgtcag cgctcttcgc catcagtcct
     1081 tttgttcggg ggcttcggct tcccccgccc gcgcctgatc gaacgcagca cggctttttc
     1141 gagcatgtag gccatggctg ccatcaccaa gcccaccaac catcgctccg tacgccggaa
     1201 gaaaggccgc ttagaaacat tgctcacgat gtcatttctc aataaccctg ggcaccaccc
     1261 caaagtgggc gaagcggttg gctacgcgac aagctgcgtg ggtactacca atactatggt
     1321 atccgtggta actacgagcg gttaagcgac ttcttctatc aagtgcagcg tatcctcttc
     1381 aaaatgctca atcgccgcag acagcgcaag agctataatg gacaaggatt cgctgcgcta
     1441 ctggaacact accggctcct gcgaccgcgg atctgcccaa gcttctgagc tatacttggg
     1501 atgacgtgtg cgaagcgagt aatatggaag agcccgatgc ggaaaatctg cacgccggga
     1561 tctgtgaggg gacggctggg caactggccg tcctacctcg atggcacgaa agtgcatgag
     1621 gattaactcg atgatgatca atggcaagct agtgctggtg agtggggctt caagcggaat
     1681 cggcgcagct accgcgaaag tgatggcgaa agctggagga cgtgtggcgc ttctcgctcg
     1741 gcgcaaggag gtcttggatc aggtggccgc cgagattacc tccgccggtg ggcaagcctg
     1801 gacatactcg gttgacttgg cggatgcgga tgcagttgcg gcggtggcga agcagattac
     1861 ggaagaactg gggacgccgg acatcatcat caacaatgca ggggcaggca gatggctttt
     1921 cgtcgatgaa acgagtcctg cagaagcggt tcagatgatg gcggttccct attttgcggc
     1981 cttcaacgtg acgcatgcgt ttctaccggc catactcgga cgaaacagcg gtcatatcgt
     2041 gaatatcagt tc
//
LOCUS       DASQSL010000680         1046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_142561, whole genome shotgun sequence.
ACCESSION   DASQSL010000680 DASQSL010000000
VERSION     DASQSL010000680.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142561"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            167..838
                     /locus_tag="VE844_07010"
     CDS             167..838
                     /locus_tag="VE844_07010"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZC01105.1"
                     /translation="MILAPTSAVKIAWRWLVLGLLLVQGCQSLPPAALAEKHLRRGNE
                     SLKAGRPEEAIAAYQRALQADPKLPGAHTNLGNALRRAGQIDQAILQYQEALRLAPHD
                     SYARANLGSAYAERGELDLAIAEYQEALRLTPNLVLAHAGLGFLYADRGKLDLAITHY
                     QEAARLVPDHPIIIHSLAALLEQAGRLADALEQWERYLQLVPNAPDRREVEWHIRHLR
                     ISLKR"
     gene            850..>1046
                     /locus_tag="VE844_07015"
     CDS             850..>1046
                     /locus_tag="VE844_07015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008875184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01106.1"
                     /translation="MATSNPLESTLKQEAVGRKTTEPGKTLVSLGSVVAALAASSCCV
                     LPPVFFFLGISGAWIRACLQS"
BASE COUNT          202 a          328 c          301 g          215 t
ORIGIN      
        1 cggtattacc ccccgtacgg ttactacccc tatactccat acgatgccta tggctcgtac
       61 tacggatccc actactgtta cgatcccaag acccatacct actacctctg ctaggcaggg
      121 gtcactggct cgtcgggcgc accggcgcgt taattggagc tgaccgatga ttctggcgcc
      181 cacgtctgct gtgaaaatag cttggaggtg gctggtgctg gggttgttgc tggtccaagg
      241 ttgtcaatcc cttcccccgg ccgctctggc cgagaagcac ctccgccgag ggaatgaatc
      301 cctcaaggca ggcagacccg aggaggcgat tgctgcctat cagcgggccc tccaggccga
      361 tccaaaactg cctggcgctc acacgaacct ggggaatgcg ctgaggcgcg ccgggcagat
      421 cgatcaagcg atcctgcagt atcaagaggc tctccgcctc gctccacatg actcctatgc
      481 ccgtgccaac cttgggtctg cctatgctga gcgaggcgag ctcgatctgg ctatcgcgga
      541 atatcaggag gccctccgcc tcactccgaa tctggtcctt gctcatgcgg gccttgggtt
      601 cctctatgcg gatcgcggga agcttgatct ggcgatcacc cattaccagg aggccgcgcg
      661 gcttgtgcca gatcacccga tcatcatcca ctccctcgct gccctattgg agcaggcagg
      721 ccggctcgcg gacgcgctcg agcaatggga acgatacctc caactcgtcc caaatgcgcc
      781 cgaccgccgg gaggtcgagt ggcatatccg ccaccttcgg attagcctca aacgctaaaa
      841 ggaatcgtca tggccaccag taacccattg gagagcacct tgaagcagga ggcggttgga
      901 agaaaaacga cggaaccggg caaaacgctg gtatcgctcg gcagcgtagt agccgcgctt
      961 gcggcctctt cgtgctgtgt cctcccgccg gtcttttttt tccttgggat cagcggagcg
     1021 tggattaggg cgtgtttgca aagtag
//
LOCUS       DASQSL010000681         1036 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_85768, whole genome shotgun sequence.
ACCESSION   DASQSL010000681 DASQSL010000000
VERSION     DASQSL010000681.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85768"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..835)
                     /locus_tag="VE844_07020"
     CDS             complement(<1..835)
                     /locus_tag="VE844_07020"
                     /inference="COORDINATES: protein motif:HMM:NF033592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC01107.1"
                     /translation="MLSALNRVDLQAIFDRDGYESRRRALPGARLVKVLVVYQMIHTE
                     KLRGLIRTLTEHAGLQAALGGTVALNTLSNGIAQRDVGQMVEAWMRVLQTYGPWLKRM
                     DRKFARLAVVDASLIKLSLLAYSWAEYRKQTGAAKMHAVLDWARGIPQQLVVTTGKVH
                     DLRGATPLYWARHWTYIFDRAYLGFDFLTTLLEAGAHFVVRFKEGVDYHILDRFAVPQ
                     APATAGFRLTSDWTISLPGWEGVVLRLVSYRLPDGKLIRVLTDRFDLCALSIAQLYKE
                     RW"
BASE COUNT          240 a          321 c          272 g          203 t
ORIGIN      
        1 tccatctctc tttatacaac tgcgcgatac tgagtgcgca cagatcaaag cgatcggtca
       61 agacccggat caacttccca tcgggcaacc gataactgac caatcgcaag accacgcctt
      121 cccagcccgg caagctgatt gtccagtcgc tggtcaagcg aaagcccgcc gtggctggtg
      181 cttgcggcac cgcaaagcga tccaggatgt ggtagtcaac cccctcttta aaacgcacca
      241 cgaagtgcgc ccccgcttcc agcagggtag tcagaaagtc aaagccgagg taagcgcgat
      301 caaagatata cgtccagtgc ctggcccagt acagtggcgt ggcccctctc agatcgtgca
      361 ctttgccggt agtgacaacc agttgttgtg ggatgccacg cgcccaatcc aggaccgcat
      421 gcatcttggc cgcccccgtc tgcttgcggt actcagccca gctgtaagcg agcagcgaga
      481 gcttgattag actcgcatcg accaccgcga ggcgggcgaa ctttcggtcc atccgcttca
      541 gccacggccc gtaagtctgc aagacccgca tccaggcctc gaccatctgc ccgacatccc
      601 gctgggcaat gccattggac aaggtattga gggccactgt cccgcccagc gccgcttgca
      661 acccagcgtg ttcggtgagg gtccggatca gcccgcgcag tttctcagtg tggatcatct
      721 gatagacgac cagcactttg accaggcgcg caccgggcag cgcacggcgg cgcgattcat
      781 aaccgtcacg atcaaagatc gcttgcaagt cgacgcggtt cagggcagag agcaacaacg
      841 tgatgactgt gatagactcg atcaggcgaa tcctccttga ggactgtatt tggaaatgtc
      901 agtctacccg acacgcggag gattcgccta gcggctacat ctaccataaa gcttttcaat
      961 aaactctttt catatcaaca gcctacatat gggacaggta gcttctcaat aacctcgggc
     1021 aagttggcaa tgccat
//
LOCUS       DASQSL010000682         1128 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_142619, whole genome shotgun sequence.
ACCESSION   DASQSL010000682 DASQSL010000000
VERSION     DASQSL010000682.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142619"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            198..1124
                     /locus_tag="VE844_07025"
     CDS             198..1124
                     /locus_tag="VE844_07025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012873275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01108.1"
                     /translation="MVDVDTFLTILYVMVDDFCKASLPPESRPGPQAALSRSEVVTLA
                     MFGQWQGFGSERGFYRFAQRHLRTAFPQLPTREQLNRQMRQHHEAVVAFFRFLVQRLV
                     AQHCVYEALDSTGVPTRDAKRRGAGWLPGLADIGWSNRLGWYEGFHLLIAVNPVGVIT
                     GFGFAPASTKDQPLADTFFALRRQPHPQLPSVGAPARGPYVVDKGFEGQANQARWWQA
                     YGAQVICPPKRNRRTPWPKALRRWLAGVRQVVETVYDKLFHTFRLDRERPHDLSGFWT
                     RLAAKIALHNFCIWLNEHLGRPRLAFADLVDW"
BASE COUNT          189 a          338 c          346 g          255 t
ORIGIN      
        1 agggtgtgat cgctccattc ctaagacata gctcttaaca tccctattcc cagaattcgc
       61 tttcagccca gggggctctt cgccttgttt gaggcccgac ttaaacgctt ggtgtgaatt
      121 aacaactatc ggtacaacgg aaggtgcctt tggcctgtag aattgctcta tcttccccaa
      181 gatcaggagc aatggctatg gtcgatgtgg acaccttcct cactattctt tacgtcatgg
      241 tagacgattt ttgcaaggcc tccttgcccc ctgaatcacg tcctggaccg caggccgcgc
      301 tgagccggag cgaagttgtg accttggcca tgttcgggca atggcagggc tttggcagtg
      361 agcgcggctt ttatcgcttt gcgcagcgtc acctacggac ggcctttccg cagctgccca
      421 cgcgggagca gctcaaccgc cagatgcggc agcatcacga ggcggtggta gccttttttc
      481 ggttcctcgt gcagcgcttg gtggcccagc actgcgtcta tgaagccctc gacagcaccg
      541 gggtgccgac gcgggatgcc aagcggcgcg gggcgggctg gttgcccggc ctggccgata
      601 tcggctggag caaccgcctg ggctggtatg aagggttcca tctgttgatc gcggtcaacc
      661 cggtgggggt gattaccggc tttggctttg ccccggccag taccaaagac caacccctgg
      721 ccgatacctt ctttgccttg cgccgccagc cccatcccca gctgccgagc gtgggagccc
      781 ctgctcgtgg tccctatgtc gtcgataagg gctttgaggg ccaggcgaac caggcgaggt
      841 ggtggcaggc ctacggcgcc caggtgatct gtccgcccaa gcgcaaccgt cggaccccct
      901 ggcccaaggc cctgcgtcgc tggctggcgg gcgtccgaca ggttgttgag acggtctatg
      961 acaagctgtt tcataccttt cgcttggacc gggagcggcc ccatgatctc agtgggtttt
     1021 ggacccgttt ggcagccaag atcgcgctgc ataacttctg catatggctg aatgaacacc
     1081 tgggccggcc gcggctggcg tttgcggact tggtggattg gtaatctc
//
LOCUS       DASQSL010000683         1872 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_142620, whole genome shotgun sequence.
ACCESSION   DASQSL010000683 DASQSL010000000
VERSION     DASQSL010000683.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1872)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1872)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1872
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142620"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(161..706)
                     /locus_tag="VE844_07030"
     CDS             complement(161..706)
                     /locus_tag="VE844_07030"
                     /inference="COORDINATES: protein motif:HMM:NF033558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HZC01109.1"
                     /translation="MIERLLLERISLRGICRAVGVGLKWLLGFIVTCFEALPEHLYVQ
                     PITCNPDVLVQRLEVEADEMSSFVQKKANKQWIWLAMDAKSRQVIAFHIGDRSRKSAK
                     RLWAKIPLGYRKQATFYTDQYVVYEGVIPAAQHKAISKLARKTNHIERFNNTLRQRVS
                     RLARETLSFSKKLANHIGAIK"
     gene            complement(731..1672)
                     /locus_tag="VE844_07035"
     CDS             complement(731..1672)
                     /locus_tag="VE844_07035"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01110.1"
                     /translation="MPALIWLYLTALLYYRTSATCTALAEALQTVSHDRLTRLLQANW
                     SGQTLLELAFRTLFVWERGYLIIDDTVIPKPFATAIESLAWVYSSQECKPVYGFSLVL
                     LIWTDGTLRIPLGIRVWHKGGPSKYALALELLSYARNRLRCRPAYVLFDAWYPSKALL
                     RRIGDYGWYFVCRLKKNRRFNGQALRTYRRHPYWAETGRLTGGLKVLVVRYGAKYFAT
                     NRLTLPAVEVRRLYQVRSHIEEVIRVCKTQLGLTGCQARSERAQQHHFTCCLIAFCVL
                     ERERHDRGLTIYKLKRQLSCHGRMVVLPALEQLRQAA"
BASE COUNT          433 a          536 c          511 g          392 t
ORIGIN      
        1 tcaaagggcg ggactaactg cccaaactcg ttcactgtga gactggtcaa atcgagcacc
       61 tctgtcgggc gcatccgtag atcggcgaag cgtaaagctc ccatagctgt ggcctccttt
      121 catcggaggc ccagcatacc ataaatcgaa attaactcta ttatttgatc gcgccgatat
      181 gattggcgag tttcttggag aaagacagtg tctcacgtgc caaacgtgac acccgctgcc
      241 gtagcgtgtt gttgaaacgc tcgatgtggt tggttttgcg ggccaatttg ctaatagctt
      301 tgtgctgggc ggcgggaatg acaccttcgt acaccacata ctgatcggtg taaaaggttg
      361 cctgcttacg atatcccaaa ggaatcttcg cccacagacg tttggcgctt ttgcgactgc
      421 gatccccgat gtgaaaggca atcacctgac ggctcttggc gtccatcgcg agccaaatcc
      481 attgcttgtt ggccttcttc tgcacaaagc tactcatttc gtcggcttcc acctccagtc
      541 gctgaaccag cacgtccgga ttgcaagtga tcggttggac atacaaatgc tcgggcaatg
      601 cctcaaagca ggtgacaata aagcctagta accacttgag cccgaccccc acagcgcggc
      661 atataccccg cagggaaata cgttcaagca ataagcgctc aatcagggca cgtttgtcat
      721 cagacggagg ttacgcagct tgtctgagct gctctagagc tggaagcaca accatacgac
      781 cgtggcaact gagctggcgc ttgagtttgt agatcgtgag gcctcggtca tggcgttccc
      841 gctccaggac acaaaacgcg atcagacaac aggtgaaatg atgctgctga gcccgttcgg
      901 agcgggcttg acagccagtc aagccgagtt gagtcttaca gactcgaatg acctcttcaa
      961 tgtgcgagcg gacctgatag agtcggcgca cctccacggc cggcagcgtc aggcgattgg
     1021 tggcaaagta tttggcgccg tatctgacga ctaacacctt caggccccca gtcagccgac
     1081 cagtctccgc ccagtaagga tggcgccgat aggtccgaag ggcttggcca ttgaaccgcc
     1141 ggttcttctt gagccgacag acaaagtacc atccgtagtc gccaatgcgc ctcagcagcg
     1201 ccttggatgg ataccaggcg tcgaagagga catacgccgg gcgacagcgc aagcggttgc
     1261 gggcatagct gagcaactca agcgccagcg catacttcga cggcccgcct ttgtgccata
     1321 cgcgaatgcc cagcgggatg cggagcgtcc catcggtcca gatcagcagc acgagggaga
     1381 agccatacac cggtttgcac tcctgactgg agtacaccca ggcgaggctc tcaatggccg
     1441 tcgcaaaggg cttaggaatg accgtatcgt cgatgatcag atagccccgc tcccagacga
     1501 agagggtgcg aaaagccagc tccaggagtg tttgcccaga ccaattggct tgcaacagtc
     1561 ttgtcaagcg gtcatgtgac acggtttgca acgcctcagc caaagccgtg caggtggccg
     1621 acgtgcgata atacagcaag gcggtgaggt agagccaaat cagcgctggc atcgagttct
     1681 ctccttcgtg gtggttggac gagaactcta ttctatctca ccgctcctgc gtaacccctg
     1741 taatgcgaca ttgcctgact gctcgccgcc tcggccgagt tcaggacgta ggcgcctacc
     1801 gctgttcgaa ttcgaaaacg acgacctcat catccgaaaa cgccacaagt ccgaccttgt
     1861 ctgtctcgta tt
//
LOCUS       DASQSL010000684         1231 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_156359, whole genome shotgun sequence.
ACCESSION   DASQSL010000684 DASQSL010000000
VERSION     DASQSL010000684.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1231
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156359"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..681)
                     /locus_tag="VE844_07040"
     CDS             complement(<1..681)
                     /locus_tag="VE844_07040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HZC01111.1"
                     /translation="MISTIIDSSVTPVGTLTGLFLRYLLLLRAFALSGLILSLAAAYY
                     ILGIMPPIVPITSVIVALGAFTLFSWWRMKAGVPIPDRAILVQLLIDILALTVVLYFT
                     GGSVNPFVSLFLLPVTVASATLRPNATWLIAAAAAFCYTGLMFIHLPAPQWGHVDHHH
                     FAFHLWGMWFGFVLSAAIVAYFVARMGNTLRAHDRELARAREQALQANQLVALGALAA
                     GTAHQLGTP"
     gene            798..1007
                     /locus_tag="VE844_07045"
     CDS             798..1007
                     /locus_tag="VE844_07045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01112.1"
                     /translation="MPLITMTQRPVTLFSGYFAFGEAFLPVKIIGILTILLGIVVITL
                     STLKRAILPRSYLRQVNLLTFSPGQ"
     gene            complement(985..>1231)
                     /locus_tag="VE844_07050"
     CDS             complement(985..>1231)
                     /locus_tag="VE844_07050"
                     /inference="COORDINATES: protein motif:HMM:NF021445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphatidylglycerol lysyltransferase
                     domain-containing protein"
                     /protein_id="HZC01113.1"
                     /translation="WFNLGIAPLSDLEAHPLAPLWHRVGRLMYRQSEHFRDLESLRRY
                     EERLNPVWRPKYLASPGGLNTLRILRNITRLIARGRK"
BASE COUNT          305 a          331 c          350 g          245 t
ORIGIN      
        1 cggggtgccg agttggtgag cggtaccggc ggcaagtgcg ccgagcgcaa ccaattgatt
       61 ggcctgtagt gcctgttcac gcgctctggc cagttcccgg tcgtgggcgc gcagcgtgtt
      121 ccccatcctg gccacgaaat aggcgacgat ggccgcgctt aggacaaaac caaaccacat
      181 gccccacaga tgaaacgcga aatggtgatg atccacatga ccccattggg gggcgggcag
      241 gtggatgaac atcagcccgg tatagcaaaa cgccgccgct gctgcgatca accaggtagc
      301 gttgggcctt aaggtggccg aggccaccgt aactggtagc aaaaacagag agacgaaggg
      361 gttcaccgaa ccaccagtga aataaagcac caccgtgagc gccagtatat cgatcagaag
      421 ttgaaccaat atcgcccgat ccggtatggg cacgccggcc ttcatacgcc accagctaaa
      481 gagtgtgaag gcgccaaggg ccacaatcac actggtgatg ggcacgatag gcggcatgat
      541 cccgagtata taataagcag ccgcgagcga taggatgagc ccgctcaggg caaaggcacg
      601 aagcagcaag agatagcgca aaaaaaggcc ggttaacgtg ccaacgggtg tcacactaga
      661 atctatgatc gttgaaatca tgagagattc cgagaatgcg cttgccggta aacgattgac
      721 caaacttcaa ggtaaatata attcatggta ggttcggcgt aaaatgcctc tgtccctatt
      781 cttcattcgt tgtcggcgtg cccttgatca cgatgaccca acgtccggtg accctcttca
      841 gtggctattt tgcctttggt gaagcgttcc ttccagtcaa gatcatcggg atcttgacga
      901 tcctgctggg catcgtcgtt attacccttt ccaccctaaa aagagcgata ctgccaaggt
      961 cttacctgcg acaggttaat ctcctcactt tctcccccgg gcaataagtc tagtgatgtt
     1021 acgcaatata cgcagggtgt tgagcccacc tggcgaggcg aggtactttg gtcgccatac
     1081 aggattaagc ctctcctcgt aacggcgcag gctttcgaga tcgcggaagt gttcgctctg
     1141 gcggtacatg agcctaccga cgcggtgcca caggggcgcc aggggatggg cctcgagatc
     1201 tgaaaggggc gcaatgccca gattaaacca g
//
LOCUS       DASQSL010000685         1289 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_167414, whole genome shotgun sequence.
ACCESSION   DASQSL010000685 DASQSL010000000
VERSION     DASQSL010000685.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1289
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167414"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            251..517
                     /locus_tag="VE844_07055"
     CDS             251..517
                     /locus_tag="VE844_07055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01114.1"
                     /translation="MGDYAHCSVSRGTEERGIRFTLHAFGGGYRILVEEWGKGEDRAL
                     WLAPLEEEEESYIGLFSEEEIRERFPYLLAALEMPDSVRAASRP"
     gene            777..1154
                     /locus_tag="VE844_07060"
     CDS             777..1154
                     /locus_tag="VE844_07060"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PPOX class F420-dependent oxidoreductase"
                     /protein_id="HZC01115.1"
                     /translation="MNVEKLAQFSNQKYLNLVTYRKSGTAVSTPLWFIEDRGVLYVRT
                     PAKSGKVKRLRNNPHVRVVPSDRHGNPKGVWIDGQARIVDCTEAERANQLVHRKYGWR
                     KKLIELWYKRNPEKRVTIAVYVV"
BASE COUNT          270 a          323 c          429 g          267 t
ORIGIN      
        1 aaattctgtt ttgcagcaca aacgcgaaaa cccgaaagaa gcctggcggt gaggaaggtt
       61 gggcctcttc gtggccccgg ctctttggtg accgtatact ttccccgcgt aggttttcgg
      121 gggaaagggt ggcgtggcgt actgtccgaa ttgcgggacg gagaacggag agggggcgag
      181 ggccggtgcc tggtccaagg ggggcgagtt cctcggcgag acgcgcctcg cccgaggggg
      241 cggaggagtg ttgggcgatt acgctcactg ctccgtgagc cggggtaccg aggagcgcgg
      301 gatccgcttc acgctgcacg cgttcggcgg gggctaccgg atcctcgtgg aggagtgggg
      361 aaagggggag gatcgggcgc tctggctggc gccgctggag gaggaagaag agtcgtacat
      421 aggcctcttc tccgaggagg agatccgcga gagattcccc tacctgctcg cggccctcga
      481 gatgcccgac agcgtgaggg cggctagccg gccttgacga gcttgggtct cttgcggccc
      541 tggctttttc gggagggggt tgcggtacga ggatcggttg actcccttat ccttgatgac
      601 gctgacgaat ttgaagttat gctaatgttc gccatgaaca gcttgtgaga gccgaagagt
      661 cggttcttgc tttgattagc ctgcgctgtt cacaaccgat aggatgagct tgctggcgcg
      721 tatgacttgt agggactggt cccgtattta taagcgatgt cgtaggaacg cgattgatga
      781 atgttgagaa actggcacag ttttcgaacc aaaagtatct caatcttgtc acatacagaa
      841 aaagtggcac cgcggtttcg acacccttgt ggttcattga ggaccgtggc gtgctatacg
      901 tacgcacgcc cgcaaagtca ggcaaagtca agcgattgcg caacaacccg cacgtacgcg
      961 tagtgcccag tgacaggcac ggaaacccaa agggtgtgtg gatcgacggc caagcccgca
     1021 tcgtggattg cactgaagcg gaaagggcta accaacttgt ccaccggaag tatggctggc
     1081 gaaaaaagct tatagagctt tggtacaagc gcaatccgga gaagcgggtg acaatcgctg
     1141 tttacgtagt atgaataatc ccggctgccc agaagaagtc ttctcggaaa cctgcatgca
     1201 gcgtcgcacc tgcgcattgt ggcctttcct attcgtcagg ggcgggcgac cacgatggct
     1261 tcggatccac aacgcgggca cttggtgcc
//
LOCUS       DASQSL010000686         1390 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_156403, whole genome shotgun sequence.
ACCESSION   DASQSL010000686 DASQSL010000000
VERSION     DASQSL010000686.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1390
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156403"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..860)
                     /locus_tag="VE844_07065"
     CDS             complement(<1..860)
                     /locus_tag="VE844_07065"
                     /inference="COORDINATES: protein motif:HMM:NF013087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008171 - O-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HZC01116.1"
                     /translation="MIENLYGEARKAEAGDLADHSELSIVAELANLASPYAVRVAATL
                     RLADLIEAGMNRLDDLAVAAGANPEALSRLMRYLTCRGVFAELEPGIFSMTKSARVLT
                     SKHPMQVRAWFDLDGPAAGRMDVSFTGLLDAVRTGAPAYPKIFGRPAWEDLEDDIDIA
                     SSFGALMASRAASFAPDVVNCYDWNDISHVVDVGGGTGLLLARLLQAYPAMTGTLVDL
                     PAMASVAKATFEAAGLAHRASAVEGNIFDSLPAGGQLYLLASILHDWNDQEATKILRR
                     CAQAAGAGHR"
     gene            complement(915..>1390)
                     /locus_tag="VE844_07070"
     CDS             complement(915..>1390)
                     /locus_tag="VE844_07070"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HZC01117.1"
                     /translation="GGRTIFCDTARVLADVSHATRTLWEQLTLTYRVTNESHYGGTVT
                     SPLIVKHPVRRFPTMRYLEPAPHNIDYLNRPVVEFHHVPVGYLAEIEQTLRDALYDPR
                     HCYAHSWVEGDFVVADNYTLLHGREPYASECGRHLRRVHVLGNPPLRNTALRAYP"
BASE COUNT          290 a          401 c          416 g          283 t
ORIGIN      
        1 attcgatggc cagcaccagc tgcctgcgcg caccggcgca ggatcttggt agcctcttga
       61 tcattccaat cgtgcaggat actggcgagc agatacagtt gcccgccggc aggtagcgag
      121 tcaaagatgt tcccctcgac agccgacgcc cggtgagcga gtcctgcggc ctcgaacgtc
      181 gctttagcaa ctgaagccat ggcaggtagg tcgaccagcg tgccagtcat ggctggatag
      241 gcctgcagga gtctggcgag aagtagcccg gtgccgccgc cgacgtccac cacgtgagag
      301 atgtcattcc agtcataaca attgaccacg tcaggggcaa acgatgctgc acgggaagcc
      361 atcagtgcac caaacgagct ggcaatatcg atatcgtctt cgagatcttc ccaggccgga
      421 cgaccaaata tcttcggata cgctggtgcg ccggtacgca ccgcatcgag taacccggta
      481 aaagagacgt ccatccggcc ggcggccggt ccgtcgagat caaaccaggc gcgtacctgc
      541 atcggatgct tgctggtaag cacacgagcc gatttggtca tcgagaagat tcccggctcc
      601 agctcggcga acaccccccg gcaagtgagg taacgcatca atcgactgag tgcctcaggg
      661 ttcgccccgg ctgcaaccgc aagatcatcc agtcgattca tcccagcttc gataaggtcc
      721 gccagccgga gtgtggccgc cacgcgcacc gcgtacggcg aggcgaggtt ggctagctca
      781 gccactatgg atagttcgct atgatctgct aagtctccgg cttctgcttt ccgggcctcg
      841 ccatagagat tctcgatcat tgtcttccct agttgctctc ggtcatttga ttttccttag
      901 ttgctgttgt gtgatcaggg gtatgcacgc aacgcggtat tcctcagcgg ggggttaccg
      961 aggacatgga ctcgtcgcag gtggcgtcca cactcgctgg cgtagggctc ccggccgtgg
     1021 agcaaggtat agttgtcggc aacgacaaaa tccccttcga cccaggagtg ggcgtagcag
     1081 tggcgcggat catacaacgc atctcgcagc gtctgttcga tctctgcgag gtatccgacc
     1141 ggcacatggt ggaactcgac caccggccgg ttgaggtaat cgatgttgtg aggagcaggc
     1201 tccagatatc gcatggtagg aaacctacga actgggtgtt taacaatgag cggtgacgta
     1261 acggtgccac cgtagtgaga ctcgttggtg actcggtaag tcaacgtcag ctgttcccac
     1321 aatgtccggg ttgcatggga gacgtccgca agtactcggg ccgtgtcgca gaagatggtc
     1381 cgtccaccgt
//
LOCUS       DASQSL010000687         2085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_5733, whole genome shotgun sequence.
ACCESSION   DASQSL010000687 DASQSL010000000
VERSION     DASQSL010000687.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2085
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5733"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..258)
                     /locus_tag="VE844_07075"
     CDS             complement(<1..258)
                     /locus_tag="VE844_07075"
                     /inference="COORDINATES: protein motif:HMM:NF024170.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01118.1"
                     /translation="MSPVRLRAGLHYPRSVGEFQSCFSTDADCLDYLDWLRWPEGFIC
                     PRCGHAGGWAVADGRYKCSRCGGRTSVTAGTLFDRRRTPLTV"
     gene            728..970
                     /locus_tag="VE844_07080"
                     /pseudo
     CDS             728..970
                     /locus_tag="VE844_07080"
                     /inference="COORDINATES: protein motif:HMM:NF025000.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
     gene            1038..1670
                     /locus_tag="VE844_07085"
     CDS             1038..1670
                     /locus_tag="VE844_07085"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC01119.1"
                     /translation="MNRCPCWSWADAPELYSGKHKTSGHAHQFVCDLFGNLMHISDPL
                     PGNTHDAKAMHQTGLNELLGDDNAIGDKGYIGTGITTPYREPAGGELLDWQKEFNTSI
                     NKTRYVIERAIAHFKTWQCMHTDYRRPERTYATAFNAVRALHFFNYVSHKPQWLPLLA
                     LRSSTDWGWLRGTRSCRRSRCQAPDTPVGTCQLDRTTGAMIFSNTAGPLR"
     gene            1906..>2085
                     /locus_tag="VE844_07090"
     CDS             1906..>2085
                     /locus_tag="VE844_07090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01120.1"
                     /translation="MTNTLVIDKYHLERAGERELINTAVVEIVYDSFSTRYIEPIHHK
                     HHDEANSVAMWPFGSR"
BASE COUNT          487 a          640 c          562 g          396 t
ORIGIN      
        1 caccgtcagc ggcgttcgcc ggcgatcgaa cagagtccca gccgtcaccg acgtccggcc
       61 gccgcatctc gagcacttat agcgaccatc agccacagcc cacccgccag catgcccgca
      121 ccgcggacag atgaagccct cgggccagcg cagccagtcc aggtagtcca gacagtcggc
      181 atcggtcgag aagcaagact ggaactcccc cacagacctc gggtagtgca gacccgcccg
      241 gagccggacc ggactcatgc ccccagcata gtccggtcag atgaatagcc ccaagtgccg
      301 ttatgcatac cgagggcagt ggcaagttgc atccgaagct tccgacttag tgtccggtgg
      361 agcagttcac cgcggatgtg cgttgcaact actgaccgat ggtgagctcg gtcgtgtcca
      421 gatcgacatc ggagaggtgc gcccgaggac ctcgcctttc gcaaatcgag tacgaggatc
      481 aagcacgtag cgcgtcgtct cgtgcctccc ttgcttggcc atggctccct cttgtgccac
      541 gccctcgcag tttaacaaca agatcaacga aaaagcgcgg atcccatgcg aaatgatcga
      601 aggagtgagg tttatgcaga agccttttaa aggggtgaat gtttcggcgt gtcgtaacca
      661 gtagggcaat ggtcccaacg ggagaatttg aaggctacgc caatagtctt cacacccgga
      721 gggaccattg cccggccagg ctactacggg actcactccc gagcaattcg acgagctcgt
      781 caaccgtgtc ggccagcgcc tggtttggga ttgcggacag ggcaggtcca aagaactgac
      841 gcttcgccaa gcagtgaaag cggtcgtgac ctacttccgt accaacgtca cacaggaagt
      901 gatcgccgaa ctgctgttcg ttgatcaatc cacgatctcc agaacgatca gtgatctgga
      961 agaaatcatc gccgaggcac tcgacgagtt cgtccccgag ctacccgagg agatcgaggg
     1021 tcgagtcgca gtggtcgatg aatcgctgtc cctgctggtc ctgggccgat gcgccagagc
     1081 tgtactccgg caagcacaag accagcggcc acgcacatca gttcgtctgc gacctcttcg
     1141 ggaacttgat gcacatctcc gacccactgc ccggcaacac ccacgacgcg aaggccatgc
     1201 accagaccgg cctgaatgaa ctcctcggcg atgacaacgc catcggcgac aaaggctata
     1261 tcggaaccgg catcaccacc ccgtaccgcg aaccagccgg aggagagctc ctcgactggc
     1321 aaaaagaatt caacacctca atcaataaga ctcgctacgt catcgaacgc gcgatcgctc
     1381 atttcaagac ttggcagtgc atgcacaccg actaccgcag acctgagcgc acctacgcca
     1441 cagcattcaa cgccgtccga gcactccact tcttcaacta cgtttcgcat aagcctcaat
     1501 ggctgccctt gctggcgctg aggtcctcga cggactgggg ctggctccgc gggacccgat
     1561 catgccgcag atcgagatgc caggcacctg acactccagt cggtacttgc cagcttgata
     1621 ggaccactgg cgcgatgatc ttctcgaaca cagctggccc tttgcgctga gtacatactc
     1681 agtgtgtgga ccggtatgct cttaatcgga tgtgggtctt cgacaagcca cacccttgtc
     1741 ggtcacgttg cctcaatcac tcaaaacacc atttagcaga atacggagtg cactaagacg
     1801 agtcgtatat tattcggcgc agttagattt atagcggaac gttgcgacga atacgtctcg
     1861 atagccgagc ttttctgggt cgaatggagt aactgcggaa acgccatgac gaatacgctc
     1921 gtcattgaca agtaccatct cgagagggct ggcgagcgtg aactcatcaa cacggcggtc
     1981 gtcgagatcg tatatgatag tttctccacc cgctacattg aaccgattca ccataagcat
     2041 catgacgaag ctaactccgt cgcgatgtgg cccttcggga gtcgg
//
LOCUS       DASQSL010000688         1297 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_100713, whole genome shotgun sequence.
ACCESSION   DASQSL010000688 DASQSL010000000
VERSION     DASQSL010000688.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100713"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(762..>1297)
                     /locus_tag="VE844_07095"
     CDS             complement(762..>1297)
                     /locus_tag="VE844_07095"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HZC01121.1"
                     /translation="PAILQGQLLFLPLFLVILTLTDGLGEELAWRGFALPRLLTHHNA
                     LVASLVLGVLWGLWHLPLAWTEGATMYQQPIWLFLMDIMATSVLFTWVFLHTRGSVLI
                     AMLFHGATNLFLVSPDVASTGDLGLPVLAMVAKWVLVAIVLLVAGPSLVGGPRPEALP
                     RTSATSAPTVGVAHTTT"
BASE COUNT          277 a          362 c          386 g          272 t
ORIGIN      
        1 cacctattac cgttagagtg tactgctgac gtactgctga caaagccccc gacgttcgtg
       61 tcgggggctt tcctttttta cgagttttgc aggcaaaata tggagccgac gagcggactc
      121 gaaccgctga cctgctcatt acgagtgatc ggtcacgtgt tgcagaggtt tgcctagggt
      181 tgcaaatccc gcatttctag gcggctttct ctgctccggg ttgctgcatg ttgcaccgta
      241 ttgcgttccc ggtggtatca gagtggtatc aataaaggca tagctgcctt acgatcgtgc
      301 tcggttgtgg gcatgtacct gaaggacgtc cagcacctcg cgagataagc gagaatccag
      361 cctctcctcg accgctactc tcgctggatg ccttcggtag gccgcaacac cgccgacagc
      421 ataactatgc gtttggctag cgtcggcgct taccggtgag cgaaggagct acgcagaaaa
      481 cctgcgtggt ccgctcgctg tctaccgtgg cagttgagca ttcacgatcc cgtacatcga
      541 ttcagcacta caacatgtag gattcggtca tcaggtgtag attcgcccta aggagcgagc
      601 cttgtggctt tgaggccacg ttttctatgg acgatcctgt atgcagactt ccgagaattc
      661 acctttcacg caatccggtg aataggggag gttgacgtgc tctttaagga acacgtcact
      721 gccaaaaccg caccaaccct cgcggaagtg ttcttctcgc cttatgtagt ggtgtgtgcc
      781 actccaaccg ttggggccga cgtcgccgag gttcgcggca gcgcttccgg gcgggggcca
      841 cccacgagac ttgggcctgc taccaagagc acgatggcta ccagcaccca cttcgcaacc
      901 atcgcaagca cggggagtcc caagtcgccg gtgctagcta cgtccggaga gacgaggaac
      961 aggttggtcg ccccgtgaaa gagcatggcg atcagaacgc ttccgcgggt gtgcaggaag
     1021 acccaggtga acaggaccga cgtcgccatt atatccatga ggaacagcca gatgggttgt
     1081 tggtacattg tggctccctc cgtccaggct agggggaggt gccatagacc ccagagcacg
     1141 ccaaggacta gactggccac aagggcattg tggtgggtga gcagccgcgg gagggcgaac
     1201 cctcgccagg caagttcctc gcccaagccg tcggtgaggg tcagtatcac caagaagagg
     1261 ggcagaaaaa gcaactgtcc ctgaaggatc gcaggcg
//
LOCUS       DASQSL010000689         1754 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_156423, whole genome shotgun sequence.
ACCESSION   DASQSL010000689 DASQSL010000000
VERSION     DASQSL010000689.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1754
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156423"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            257..1669
                     /locus_tag="VE844_07100"
     CDS             257..1669
                     /locus_tag="VE844_07100"
                     /inference="COORDINATES: protein motif:HMM:NF033540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS701 family transposase"
                     /protein_id="HZC01122.1"
                     /translation="MGERLQGCWERFRGCFKTRTRDGSAYGLAYLSGVLRMETNRHFA
                     GIGRETGVSGQNLQHFMSASAWSGQAVCQQVEAELKATPELVRGGVLLVDESAEEKAS
                     AKSAGAGRQYNGRLGKVEMSQVGVLLSYVNLKVAQGFWSWIDGRLFLPEAWFGVDREA
                     LGKRLGIPKGRGFKTKVELAWEMIEAAITHGVPFEIVGFDTLYGRSGWLRAQLRNAGA
                     LYMAEVPVDTELYLEKPLLGIPERLSKCGRPPSKVQVLSGEAVRVDSLRAQVPWQNLR
                     LRTTERGELCDPFAARRVWTVYEGEAVEEWLVLRREANGKYSYALCNAPADKPLEHLA
                     EWKCQRYFIERSNQEAKSELGWDELQAQKYPAWEHHLALTVLASWFVAQTKFEWARDY
                     PRDPKLLQPLGTDQLPALSVANVRLLLRAVMPLQRLSVKQATDLAIEHLLNRTRSRKS
                     RLKKQRLAKEPVAYHGLAQM"
BASE COUNT          388 a          424 c          583 g          359 t
ORIGIN      
        1 gaagcgcttt gggagtagga ttaaactatg ttctaagcct cgaaagatta taagtcttct
       61 ctcaatctct taaaacaaca tggcgttatt atcttgccaa tgtcacattt ggagaagtcc
      121 atagagagcc atggctaggg gtggaggaga ttataggtta aagagctatt ctgatgattt
      181 tttgaggttg gaggatagcg atgagtaaaa aaagacccgg cggtggtggg gcttaccgaa
      241 gaaagccgta aggcggttgg gcgaacgatt gcagggttgt tgggaacggt ttcgaggctg
      301 tttcaagacg cgcacccgag acggtagcgc ctatgggcta gcctacctga gtggggtgtt
      361 acggatggag acgaaccgac actttgcagg gataggtcgg gaaacggggg tgagcggcca
      421 gaacctgcag cacttcatga gcgcgtcggc gtggtcaggg caggcggtat gccagcaggt
      481 ggaggcggag ttgaaagcca cccccgagct tgtgcgcggg ggtgtattgt tggttgacga
      541 gagcgcggag gagaaagcga gtgccaagag cgccggggcg gggcggcaat acaatgggcg
      601 cttgggcaaa gtggagatga gccaggtagg ggtgctgctg agttacgtca acctcaaggt
      661 agcgcagggg ttttggagtt ggatagacgg gcggctgttt ctgccggaag cgtggtttgg
      721 ggtggatcgg gaggcgttgg gtaagcgtct gggtataccg aaaggtcggg gtttcaaaac
      781 caaggtggaa ctggcctggg agatgatcga agccgccatc acccacggag tgccttttga
      841 gatcgtaggg tttgacacct tgtatgggcg cagcggctgg ctgcgcgccc agctgcgcaa
      901 tgccggggcg ctgtatatgg cggaggtgcc ggtagacact gagctctatc tggaaaaacc
      961 cctcctgggt atccccgagc gcctctcaaa gtgtggtcgc cccccatcga aggtgcaagt
     1021 gttgagtggg gaagcggtgc gggtggatag cctgcgcgcg caggtcccct ggcagaacct
     1081 ccggctcaga accaccgaac ggggggagct atgcgacccc tttgccgccc gccgggtatg
     1141 gacggtgtat gagggtgaag cagtggaaga gtggctggta ctgcgccgag aagcgaatgg
     1201 caaatactcc tatgcgttgt gcaatgcccc ggccgataag cctttggaac atctggccga
     1261 gtggaagtgc caacgctact tcatcgagcg ttccaaccaa gaggccaaat cggaactggg
     1321 gtgggacgag ttgcaggcgc agaaataccc cgcctgggaa catcatttgg ctttgaccgt
     1381 tctggcctcc tggttcgtgg cgcagaccaa attcgagtgg gcccgagact atccgcgtga
     1441 ccctaagttg ctacaacctc tgggaacaga tcagctgccc gccctttcgg tcgccaatgt
     1501 gcggctcctt ctgagagccg tgatgccgtt gcaacgcttg agcgtgaaac aagccaccga
     1561 cttggctatt gaacacctgc tcaatcgcac ccgctcgcgc aaaagccgac tgaaaaaaca
     1621 gcgccttgca aaagaacccg tggcctacca tggcttagct caaatgtgac attggcaagg
     1681 tacttcttcg agcgtaaccc ggaggcttac tccgtgattg tcgctccggt gctatggcca
     1741 gatccatcac ccca
//
LOCUS       DASQSL010000690         2864 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_85813, whole genome shotgun sequence.
ACCESSION   DASQSL010000690 DASQSL010000000
VERSION     DASQSL010000690.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2864
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85813"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1940)
                     /locus_tag="VE844_07105"
     CDS             complement(<1..1940)
                     /locus_tag="VE844_07105"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZC01123.1"
                     /translation="MLTNTFTPHVGGVARSVQGFTEEFRRRGHRVLVAAPVFKNTPKN
                     EQDVVRFPAVQYFNGSDFSLPVLEPVRLVSLLRRFHPEVVHSHHPFLLGGAALRIAAA
                     RKLPLVFTHHTMYDKYTHYAPGDSPRLKRFVVDLVTGYCNLCDTVVAPTKTVADLLRE
                     RGVQTPIAVIPSGVDMALFKDGDGSVLRKRLGIPLDAFVIGHVGRLTVEKNLAFLSEA
                     VARCLEQHARACFLLVGMGPLSEQIRAIFKSRGLGSRLYSVGCLERFELAHAYQAMDV
                     FAFASHTETQGLVLAEAMASGVPVVAVDAPGAREIARDGYNGRLLRRDNLERFVSALL
                     GIAALSPEAKRRMVENTRLTAAELDIRQSASETLELYRSLIGVTPSVKRLEDSLWARA
                     CGSLKGEWQMLRNLLLAVGESLRPNLVWEVGPTGHVVSLEEDPIPSEAPPKNTPPPLE
                     RQRSARPSLRARFFGWFWASLLRLQCATWRKRFEGMDQLDQILREGHKVLFSFWHGKY
                     VPLFALLRGRPACVFTSQSTRGEVIAEICRRFGYDCVQVPVRGNRPALELMQRALAHH
                     QNGGIAVDGPLGPYHRVKRGAIKLASLVGYVVVPASVCARRKRVMKHRWDRLELPGLF
                     TRVGFAIGGPMEIPPDLSVEEI"
     gene            complement(2043..2216)
                     /locus_tag="VE844_07110"
     CDS             complement(2043..2216)
                     /locus_tag="VE844_07110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01124.1"
                     /translation="MQRQVNWIAALIGIFVWLLFRTVAPKLGIGWPWSSFGGVVLGVM
                     VYFALEDYWPKQR"
     gene            2356..>2864
                     /locus_tag="VE844_07115"
     CDS             2356..>2864
                     /locus_tag="VE844_07115"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HZC01125.1"
                     /translation="MPETSVDNHLENQAGPGLARRLGLTVLILYGVGDILGAGIYALV
                     GKVAGIAGSAAWISFILSGILALVTGLSYAELSSRIPRSAGAAAFSARAFKNPLIPGL
                     VGILVLTSGITSSATVSLAFYGYLNEFIGLAQLPAAIGLLALINLVSFLGIHHSVRTN
                     NILTAIELFG"
BASE COUNT          628 a          893 c          761 g          582 t
ORIGIN      
        1 tttatctctt ctacagagag atccggcggg atctccatag ggccgccgat ggcaaatccg
       61 acccgcgtaa aaagaccggg taactccaac cgatcccagc ggtgcttcat cacccgttta
      121 cgccgcgcac acacggaggc aggcaccacc acgtagccca ccagggaggc gagcttgatg
      181 gcgccccgtt tgacccggtg gtagggcccg agcggcccat ccacggcgat acccccgttt
      241 tgatgatggg ccagggcacg ctgcatgagc tctagggccg gtctgtttcc acgtacggga
      301 acctgtacac agtcatagcc aaagcggcgg cagatctcgg caatgacctc accgcgcgtc
      361 gattggctgg tgaaaacaca ggccggtcgg ccccgtagca gggcaaaaag cggcacgtat
      421 ttgccatgcc aaaagctaaa gagcaccttg tggccctctc ttaggatctg atccagctga
      481 tccatgccct caaagcgctt tctccaggtg gcgcactgga gccgtaacag ggaggcccaa
      541 aaccacccaa aaaatcgagc ccgtaagctc ggacgagcgc ttctctggcg ctccaagggc
      601 ggtggggtat tcttgggtgg agcctctgat gggattggat cttcttccaa ggagacaacg
      661 tgtccggtag gcccgacttc ccaaacgaga tttgggcgca gcgactctcc gacggcaagg
      721 agcaggttgc gcagcatttg ccactctccc ttcaagctgc cgcaagccct cgcccacaga
      781 ctgtcttcga gacgcttcac cgaaggggta actccaatca atgatcgata gagctcaagc
      841 gtctcggaag cggactgcct tatatccaat tcggccgccg tcaagcgggt attttctacc
      901 attctgcgtt ttgcctcagg cgagagcgcg gcgatcccta agagcgccga gacgaatcgc
      961 tcgaggttat cacgccgcag cagtctgccg ttgtagccgt cgcgcgcgat ctcacgcgcg
     1021 ccgggcgcat ccacggccac cacgggcacg cctgaggcca tggcttccgc cagtaccagc
     1081 ccctgggtct cggtgtgaga ggcaaaggcg aacacatcca tcgcctgata ggcgtgcgct
     1141 aactcgaagc gttccaggca ccccaccgaa tacaggcggg aacccagtcc gcgcgactta
     1201 aagatagccc ggatctgctc gctcagggga cccatgccga ccaatagaaa gcaggcccgc
     1261 gcgtgctgct caaggcatcg cgctacagcc tcgctcagga acgcgagatt cttctccacc
     1321 gtcaaccgtc ctacatggcc gatgacaaag gcatcgaggg gtatccccag gcgcttacgt
     1381 aagaccgatc catcaccgtc tttgaacagc gccatatcca ctccgctcgg tatcaccgcg
     1441 atcggcgttt gcaccccgcg ctcacgcagc agatcggcca ccgtcttggt cggcgcaacg
     1501 acggtatcac acagattgca ataaccggtc accagatcca cgacaaaacg cttgagccgc
     1561 ggtgaatccc cgggcgcata gtgggtatat ttgtcgtaca tggtatgatg ggtgaaaacc
     1621 aggggcagct ttctcgccgc tgcaatgcgc aacgccgcac cgcccaagag aaacgggtga
     1681 tgcgagtgaa ccacctcggg gtgaaacctt cgcaggagag acaccagccg gaccggctcc
     1741 agcacaggga gtgaaaagtc gctgccgttg aagtactgca ctgccgggaa gcgaactaca
     1801 tcctgttcat ttttaggcgt attcttgaac accggggccg cgaccagcac ccggtgccct
     1861 cttcgccgga attcctcagt gaaaccctgc acactccggg ctacgcctcc cacatggggc
     1921 gtgaaggtat tggtcagcat caagatattc atttttaagg atttaccgat tgttataatt
     1981 gtgtatcccc cacgcgtccc tccacgcatt ataaggaaat tttacccgcg ttagtgtggt
     2041 tttcaccgtt gtttgggcca ataatcctca agcgcgaaat acaccattac cccgagcaca
     2101 acacctccaa aactcgacca tggccaccca atcccaagct taggcgccac cgtcctaaac
     2161 agtaaccata cgaagatccc gatcagtgcc gctatccagt tgacctgccg ttgcattttc
     2221 acctcctgct aagccagcct agttcggtag taggttgata ttctcaagcc cttggtttag
     2281 tttttgcact tatcaaatcg caaaaccggc tggggatcaa gttaaaatgg ccaaagggag
     2341 gatcatcccc aatcaatgcc cgagacgagt gtcgataatc acctagaaaa ccaagctggc
     2401 cctggccttg cgcgccggct gggcctcact gtcttaatcc tctatggtgt gggcgatatc
     2461 ctgggcgccg ggatctacgc tttagtcgga aaagtggcag ggatcgcggg ctccgcggcc
     2521 tggatctcgt tcatcctctc cggcatcttg gcgctcgtga ccggcttaag ctacgccgag
     2581 ctgagttccc gcattccgcg cagcgcaggg gcggctgcct tctccgctcg tgcttttaag
     2641 aatcccttga tcccgggcct agtaggcatc ctggtattaa ccagcggcat cacctcttcg
     2701 gctacggtat cgctcgcctt ttacggctat ctcaatgaat ttatagggct agcgcaacta
     2761 ccggctgcga tcggtttact tgcgctcata aacctggtga gctttcttgg catccaccac
     2821 tccgtccgaa ccaacaacat tctcacggcg atagaactgt tcgg
//
LOCUS       DASQSL010000691         2006 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_59357, whole genome shotgun sequence.
ACCESSION   DASQSL010000691 DASQSL010000000
VERSION     DASQSL010000691.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59357"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..685)
                     /locus_tag="VE844_07120"
                     /pseudo
     CDS             complement(1..685)
                     /locus_tag="VE844_07120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012674962.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase"
     gene            complement(702..>2006)
                     /gene="speA"
                     /locus_tag="VE844_07125"
     CDS             complement(702..>2006)
                     /gene="speA"
                     /locus_tag="VE844_07125"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF003763.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008792 - arginine decarboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006527 - arginine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HZC01126.1"
                     /translation="DQSKFGVSIPELIALVQRLKEENLSDALVLLHFHLGSQLADIQI
                     VKQAVKEITQVYAQLLKRGMPVQYLDVGGGLGVNYEAGYADDEGSINYTLQEYANAVV
                     YSVKEVCDDEQVAHPTLVSESGRAITAHHSVLIVEVLGAYRKDEIMDTFTPATEDNSA
                     VHELFEVLSRVQTAARQNGQRISELLEAYHDAVEKRQEAHTMFGLGYLPIEQKALAER
                     LYWSICKAIQEQVQRLEAESVPQELRALDDHLVDQYLCDFSVFQSILDHWSIGQGFPI
                     MPIRDLQERPKRRAMIVDLTCDSDGKVSHYVSSNPDKRFLEVPDLNEREPYYFGFFLM
                     GAYQDIMGDSHNLFGRVAEAHVYADAEEPGGYYIEKIIPGTSVQEMLALVQYFPNDLH
                     RRMNNLIRQKIEAGMIRPKAGVELLEQYMQCFAQSTYYNPVE"
BASE COUNT          433 a          578 c          554 g          441 t
ORIGIN      
        1 tccccggcgt gggctcgaag ccagtgcggt tcaccgccac cacataacag ccattagcta
       61 cagcatgggc gcgcagctat agttcccagg ccgtgtgctg tcgctcacca agcctctctt
      121 tttcctcagg gtgccagccg atcgccgtag gatagaacag gatctccgca ccctgcaaag
      181 ctgtcagccg ggccgcctca gggtaccact ggtcccagca taccagcacg ccgagtgtgc
      241 cccctgctgt tgaaaaggat ctgaatccca gatcgcctgg ggtaaaataa aatttctcaa
      301 aataccgcgg atcatcgggg atgtgcatct tgcgatactt gccgagatag ccgcgtttgc
      361 cgtcgatcac cgccgctgtg ttgtggtaaa gacccgctgc acggcgttca aagaggctta
      421 cgatcacacc gatctcgagc tctgcggcga gtgcgccgaa ggcctgggtc gtggggccgg
      481 gcaccgattc ggcaagacgg aaattttcat gatcctcggt ctggcaaaaa tagcgcgagc
      541 gaaacaattc gggaaggcag acgatcgcgg cgccctggct ggctatctcg cgggtcatcc
      601 ggagcgcttt tttgagattg acctccaggt cctcctcaca gcgcatctga acgagcccta
      661 tatggaccct gcgggttacg tccataagta gattcccctc gctattcgac aggattgtaa
      721 taggtgcttt gagcgaagca ctgcatgtat tgttcgagta gctcgacgcc ggccttgggg
      781 cggatcatac cggcctcgat cttctgccgg atcaggttat tcatacgtcg gtgtaagtcg
      841 ttcgggaagt attggacgag ggcgagcatc tcctggacag aggtgccggg gatgatcttc
      901 tcgatataat atccgcccgg ttcttccgca tcggcataga catgggcctc ggccacccgc
      961 ccgaacagat tgtgcgaatc gcccatgata tcttgatagg cccccatcaa aaagaaaccg
     1021 aaataatagg gttcccgctc gttcagatca ggtacctcca gaaaccgctt gtcggggttt
     1081 gacgacacat agtgcgaaac cttaccatcg gaatcgcagg tcagatcgac gatcatggcc
     1141 cgccgtttgg gacgttcctg cagatcccgg atcggcatga ttgggaatcc ctgaccgatc
     1201 gaccagtgat ccaggataga ctgaaacacc gagaagtcgc agagatattg atccaccagg
     1261 tgatcatcga gcgcccgtag ctcttggggg acagactccg cttcaaggcg ctggacctgt
     1321 tcctggattg ccttacagat agaccaatac agccgctctg ccagggcctt ttgctcgatg
     1381 ggcagatagc ccaagccgaa catggtgtgc gcttcctgac gtttctcgac ggcgtcatgg
     1441 taagcctcca agagctccga gatccgctgt ccattttgtc tcgcggcggt ctgtactcgg
     1501 ctcaagacct cgaataattc gtgaactgca ctgttgtctt cggtggcggg ggtgaacgtg
     1561 tccatgatct catctttacg ataggccccg agcacctcga cgatcaggac cgagtggtgg
     1621 gcggtgatgg cgcgcccgct ctcggagacc agcgtagggt gggcgacttg ttcatcgtcg
     1681 cacacctcct taaccgaata aaccactgcg ttagcatact cctggagcgt ataattaatg
     1741 ctaccctcat catccgcata gcccgcctca taattgacgc caaggccacc gcccacatcc
     1801 aggtattgca ccggcatgcc gcgcttgagg agctgagcat acacttgcgt gatctccttg
     1861 accgcctgct tgacgatctg gatgtcggcg agctgactgc ccagatgaaa atgcagtaac
     1921 accaaggcat cggagaggtt ttcctccttc aggcgttgta ccagggcgat caattccggg
     1981 atagagacac cgaatttgga ttgatc
//
LOCUS       DASQSL010000692         1121 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_167443, whole genome shotgun sequence.
ACCESSION   DASQSL010000692 DASQSL010000000
VERSION     DASQSL010000692.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1121
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167443"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            642..>1121
                     /locus_tag="VE844_07130"
     CDS             642..>1121
                     /locus_tag="VE844_07130"
                     /inference="COORDINATES: protein motif:HMM:NF013124.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZC01127.1"
                     /translation="MGREREMVEVERELAMTRLLTITGAGGSGKTRLALEVARDLLEA
                     YPNGVWLVELAPLSEEALVPKAVAEALEVPERPGEPLTDTLAEILRDRQLLLILDNCE
                     HLLEATARLVDKLLDACPRLRIMATSREATGVEGEIRWLVPPLSVPEPQGTPSSEELE
                     "
BASE COUNT          252 a          319 c          343 g          207 t
ORIGIN      
        1 agcttgccca atgtgcatgg aaaggaacta gtcgtggacg atggtgttag gcggatacga
       61 gggtacaatt gacaccactc tgacaccacc gggaacgcaa tacggtgcaa cgcacagcaa
      121 cccggagcag taaaagccgc ctaaacatca gggttttgca atcccctgca acactctgca
      181 acgcatgatg gatcactcgt aatgagcagg tcaggggttt gactccgcgc gtcggctctc
      241 tactttttct caatttgcag gtgaaacgca ggacgaaaca agagacttgg cgacagtgcc
      301 gggcccattt acgctaaccg tgtactaacc tgcttaggaa agggtgattg tcccttctgt
      361 gtatgggccg ccacggcgca ctcatgcgtg ttacgcaacg acacaccaga ccgacagcta
      421 cgttgacgca ccagaccgat tgctacaata atgccggacg gatgtacgaa cgccgcgata
      481 agaacagggt tctgcgtcga ggcaggaacg caaggccacc ggattcttcc ttttaggcga
      541 gtggccggac aacagaagcg ggatactctt tgagcaccgg tagaacacac caaactcgga
      601 gcacccctct tcacaacctc cctgctctga ggagcagctt cgtgggccgt gagcgagaga
      661 tggtggaggt cgagcgtgaa ctggccatga cacggctctt gacaatcacc ggcgcaggcg
      721 gctctggaaa gacgcgcttg gccctggagg tggcccgcga tctcctcgag gcctacccga
      781 acggggtgtg gctggtagag ctcgctcccc tctctgagga ggcgctggtg ccgaaggcgg
      841 tggcggaagc cttggaggtg ccagagcgtc ctggggagcc gctgactgat acgctggcag
      901 agatcttgcg agataggcag ctgctcctca tcctggacaa ttgcgagcat ctccttgagg
      961 ctaccgcccg gcttgtggac aagctgctcg acgcgtgccc gcgcttgcgg atcatggcaa
     1021 cgagtcgcga agccacagga gtggaaggag agattaggtg gctcgtccct ccgctctcgg
     1081 tgcccgagcc ccagggcacg ccctcatcag aggagctaga a
//
LOCUS       DASQSL010000693         1310 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_73969, whole genome shotgun sequence.
ACCESSION   DASQSL010000693 DASQSL010000000
VERSION     DASQSL010000693.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1310
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73969"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..647
                     /locus_tag="VE844_07135"
     CDS             <1..647
                     /locus_tag="VE844_07135"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZC01128.1"
                     /translation="RLMKARTALVNEIRGLLNEYGIILPQGVTKFRAAVVSKLEDEQA
                     KLTVMSSEMFRQLYDEFLALEKRLESYDEKLAAIGQAHPECQWLQTIPGVGPVSATAL
                     VAAIGDVTQFKNGRQLAAWLGLVPREHSTGGKPRLLGISKRGNIYLRKLFVHGARATL
                     RWVETKTDDRSQWLRALMARRGKNRAAVALANKNARIAWALLAHNQEYSVRPAA"
     gene            complement(988..>1310)
                     /locus_tag="VE844_07140"
     CDS             complement(988..>1310)
                     /locus_tag="VE844_07140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018420509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HZC01129.1"
                     /translation="IRRHGVPEKITIDGSEANAAAIRSYNKEYGTAISIRQVKYLNNM
                     VEQDHRSVKRVTRPMLGFKSFAAAQAALVGIELMHMLKKGQMVVVEGAEGLTAADQFY
                     ALAA"
BASE COUNT          275 a          375 c          387 g          273 t
ORIGIN      
        1 agcggctcat gaaggcccgc accgccttgg tcaatgagat ccgcgggctg ctgaatgaat
       61 acggcattat tctgccccaa ggcgtcacga agtttcgtgc agcagtggtg agtaagcttg
      121 aagacgaaca ggcgaaactc acggtgatga gttcggagat gtttaggcag ctctatgacg
      181 agtttctcgc cctggaaaaa cggttggagt cttacgacga gaagctcgcc gccatagggc
      241 aagcccatcc cgaatgccaa tggctacaga ccattccagg ggtcgggccg gtcagtgcca
      301 cagcgctcgt cgcagctatt ggcgacgtaa cccagttcaa gaatggccgc cagttggcgg
      361 cctggctggg attggtcccg cgggaacact ccacgggcgg caagccacga ctcctcggaa
      421 tcagcaaacg tggaaatatc tatctgcgca aattgttcgt ccacggcgcg cgcgctaccc
      481 tgaggtgggt cgaaaccaag accgatgaca ggagtcaatg gctcagagcc ctcatggccc
      541 ggcgagggaa gaaccgggcg gccgtcgcgt tggccaataa aaacgcccgg attgcctggg
      601 ccctcctcgc ccacaaccag gagtacagcg tcaggccggc agcatagact gctgggtgcc
      661 cgctattatt ctgttatcaa gcacgactct gcacaataca aggtgcacca ctgagctgat
      721 gagatgatag gtcagaccgg cttctccaga ctctgctttg cgacatggcc cccgaggccg
      781 cggctgtatt gaggaggaga agcgcacatt gcatcagggc cggaagggct gatcaccccc
      841 ttcgctcaac aggccggata tatgacggca tctggcctct tccgtgtggc cgttcgactg
      901 tctcttgaca ccggcggcgg gtccatatat gtcacaaatt ttcgtgtgga gacgctttga
      961 ggtgagttga cgctgtcggt agggtgatta ggcggccagg gcgtagaact ggtcggctgc
     1021 cgtgaggccc tctgctccct ccaccaccac catttggccc tttttgagca tgtgcatgag
     1081 ctcgatcccg accagtgcag cttgggcggc cgcaaacgat ttgaagccaa gcatgggacg
     1141 tgtgacccgc ttcacactgc ggtgatcctg ctcgaccata ttattcaagt atttcacttg
     1201 gcgaatgcta atcgctgtac cgtattcctt gttgtagctg cggatggccg ccgcattggc
     1261 ctcactccca tcgatcgtaa tcttctcagg cacgccgtgg cggcgaattg
//
LOCUS       DASQSL010000694         1248 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_156441, whole genome shotgun sequence.
ACCESSION   DASQSL010000694 DASQSL010000000
VERSION     DASQSL010000694.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1248
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156441"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1248)
                     /locus_tag="VE844_07145"
     CDS             complement(<1..>1248)
                     /locus_tag="VE844_07145"
                     /inference="COORDINATES: protein motif:HMM:NF033559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC01130.1"
                     /translation="ISPRVFTPDKLNDDALGRTLDRLYGDGVTELYSLISATAAKRLG
                     LGPTSGHLDTTSFHVDGHYNSDSEPDAKVVHITQGDSRDHRPDLNQVMLELIVEHQAG
                     IPVLMQPLSGNHSDAKGFGQTVSDHIGQLQTTHGLTYLVADSALYSEDNLGLLRDARV
                     KWITRVPATLSQAQEALAQAEPDTMTPLKPGYRYHTLSATYGGTDQRWLLIASDARRL
                     QAQQTVRKRWRKQSEKELKAFNKLCRCSFACEADAPQALSAFEQRLQYTACHGATSRS
                     TPRYDKPGRPKAEDVPKDVIYQIEGALASPLASHAKLVTQESCFILATNDLDEERLPP
                     LALFDHYQGQQRVERGFRFLKSPEFLASSLYLKKPERIMALLMVMTVCLMVYAALEYR
                     IRQALKTHEATFPNQKGQRVQNPT"
BASE COUNT          243 a          324 c          406 g          275 t
ORIGIN      
        1 gtgggattct gcacgcgttg ccccttttga ttggggaagg tggcctcatg cgttttgagc
       61 gcctggcgaa tgcggtattc caaagcggca taaaccatca aacacacggt catgaccatc
      121 aacagagcca tgatgcgttc aggctttttg aggtagaggg aggaagcgag aaactcaggg
      181 cttttgagaa atcggaagcc gcgctccacc cgctgttggc cctgatagtg gtcaaagaga
      241 gcgaggggtg gcaagcgctc ttcatcgaga tcgttggtgg ccaggataaa acaactctcc
      301 tgcgttacta acttggcatg agaggcgaga ggcgaggcga gcgccccttc gatctggtag
      361 atgacgtctt tgggcacgtc ctcggccttt ggccgcccgg gcttgtcata gcggggtgtc
      421 gagcgactcg tggccccgtg gcaagcggtg tattgcaagc gttgctcaaa ggcgctgaga
      481 gcctgcgggg catccgcttc acaggcaaaa gagcaccgac aaagcttatt gaaggctttg
      541 agttccttct cactttgttt gcgccagcgc ttcctcacgg tttgttgggc ctgaaggcgc
      601 ctggcgtcag aggcaatgag caaccaacgc tggtcggtgc cgccgtaggt ggcgcttaag
      661 gtgtgatagc gatagcccgg ttttaagggg gtcatcgtgt cgggctctgc ctgggccaac
      721 gcctcctgag cttggcttaa cgtggcggga acacgtgtga tccacttgac ccgggcatcg
      781 cgtagtaggc ccaggttgtc ttcactatag agggcgctat cggccacgag atacgtcagg
      841 ccatgcgtgg tttgcaactg cccgatatga tcgctcacgg tctggccaaa gcctttggca
      901 tcgctgtgat tgccgctgag gggctgcatc aacacgggaa tgccggcctg atgctcgacg
      961 atcaactcca gcatgacttg gttgaggtcg ggccggtggt cacggctatc accttgggtg
     1021 atgtgcacga cttttgcgtc gggctcactg tcgctgttgt agtggccatc gacatggaaa
     1081 ctggtggtat cgagatggcc agaggtcggc cccaggccca ggcgtttggc agcagtggca
     1141 gagatgaggc tgtagagttc cgtcacgcca tcgccataga gccgatccaa ggtgcggccc
     1201 agggcatcat cgttgagctt gtctggcgtg aacacacgcg gcgaaatg
//
LOCUS       DASQSL010000695         1308 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_30380, whole genome shotgun sequence.
ACCESSION   DASQSL010000695 DASQSL010000000
VERSION     DASQSL010000695.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1308
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30380"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(857..1093)
                     /locus_tag="VE844_07150"
     CDS             complement(857..1093)
                     /locus_tag="VE844_07150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01131.1"
                     /translation="MDTPQELSRWACGFCGATAAELSSPQLPPLGGQIVIRTHVLDVH
                     EVLLADLEGSSQIGATWTLPDGRVWMREIRSEEA"
BASE COUNT          286 a          378 c          346 g          298 t
ORIGIN      
        1 gccccagaca accccataaa ccaatattga taaaaatatt ttcatataga gcattattaa
       61 tgtgataatt acacctaggc ttgtcaggtg cctttgagta tcatgggtaa acggaccgca
      121 cagaggaggg aagcgatgca gaaatgtcgt cctagactca taacagcggt ggtgctggtg
      181 ctcatcagtg cttagacgat gacagcactg gcgaatagct cagccccaga ggtgccgccg
      241 gagatcccga ctccccaagt caccttcacc ttcgcggggg tgatctacaa taacccgcca
      301 gcctggacct gccgcagcca aatcgtaaat gcgtgtctga tctgtacgaa tacgagcggc
      361 gatgtcagca caatgcaagt gatgagcctc gttatgagcg gacatgagtg gttaaccttc
      421 actattccaa tcggcggtga agttcggagc tgtggaaaca tcatcttcct gcctgtgttc
      481 cccaactgag gactattggt cattctcgtt ccagcaggcc cacccatccg catagatggt
      541 ggcgtgcccc aggaccatcg gacctggcgc gcgcgtcggt tactgggcaa tgggtcttga
      601 ctcgcgcctt gatattccgg tgttgcgccg ttcgttcatg tcgagcaggc atcatcatct
      661 tggcttcccc ttctgatcac tttcccggtc cgatatccca gcctatgagg ctggcaggtg
      721 cagcctgcca tctagtcacg gggtgacccc agttcacagg tggccagtct gcacattttc
      781 accttttgtt attacgccct cactgacctc tcttgcgatc gtgacggaga gggaaggctg
      841 atgcaacgaa gagtgtttaa gcctcttctg accgtatttc acgcatccac acccgcccat
      901 cagggagggt ccacgtcgcc ccgatctggc tggagccttc caggtccgca aggagaacct
      961 catggacgtc cagcacatgg gtccggatca caatttgccc gccaagcggt gggagctgcg
     1021 gtgatgagag ctccgccgct gtagctccgc agaatccaca agcccaacgt gagagttcct
     1081 ggggcgtgtc catatgatat ccctcctgac aggtatgggt gaacgtttat gtatcgatga
     1141 caattggaca gactcaacag acagagaagg cattgaacac aattcctccg atgggtgcaa
     1201 gttcttctgc ccccgagggg cctcgtgccg ctgtatacgc gccgttcccc cggcaccacc
     1261 gtcctgcaag ctgttgatgt cgctaccctg gtgagctagc agccgacc
//
LOCUS       DASQSL010000696         1551 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_142734, whole genome shotgun sequence.
ACCESSION   DASQSL010000696 DASQSL010000000
VERSION     DASQSL010000696.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142734"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(236..931)
                     /locus_tag="VE844_07155"
     CDS             complement(236..931)
                     /locus_tag="VE844_07155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012385321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HZC01132.1"
                     /translation="MIDLYYWPTPNGHKITVFLEETSLTYQIIPVNIGKGDQFNPPFL
                     KISPNNRIPAIVDHNPMDGGAPMSVFESGAILLYLAEKTGCFLPVDLRGQFEVLQWLF
                     WQVGGLGPMAGQNHHFVQYAPEKIPYPIQRYVNETSRLYAVLDRRLTEQEFIAGEYSI
                     ADMAAYPWVVPHKQQQQNLDDFPNMKRWFAAIRTRPATVRAYEIGRRISDQPVVTEES
                     RSILFNQSAKTVR"
     gene            1034..>1551
                     /locus_tag="VE844_07160"
     CDS             1034..>1551
                     /locus_tag="VE844_07160"
                     /inference="COORDINATES: protein motif:HMM:NF037015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HZC01133.1"
                     /translation="MYKRIRLFVLTGIIFSLNSIPFAPRAAQAAGSVIISSPNQGATI
                     TGPVRISGIYTNAYSVAISFNAGQIYDVHMEDSDANESGTWYYDWTPAGFSGNVEIRV
                     RATNIDDRYWIWAPVRTVNVSIAAQQPPVVAIVSPGDGATAHGIMPITVAASDPQGLA
                     SVQVRIDWWSWQT"
BASE COUNT          346 a          426 c          412 g          367 t
ORIGIN      
        1 gtcaaccata agcttttgat ttaacaatat cttttatcaa gagtaagtat tcatataaga
       61 acttgacctg cagcccattt cagcttcgct attactgggc caagatacca acacacgcaa
      121 accagaataa tgcctgcccc ggaccaggcc aggccctctt gaagtcaacc atgctagctc
      181 cttcgagctc ttgtcaggag agcagtataa gggagctgta ttacaccgtt catcatcagc
      241 gcacggtctt cgcactctga ttgaacagaa tcgatcgtga ctcctcggtg actaccggct
      301 gatcgcttat ccttcttccg atctcataag cacgaacggt ggccggacgg gtgcgaatcg
      361 ctgcaaacca tctcttcatg ttcggaaagt cgtcgaggtt ctgttgttgc tgcttgtggg
      421 ggacgaccca cggataggct gccatatcgg cgatggagta ctccccggcg atgaattcct
      481 gctcagtaag ccgccgatcg agcacggcat acagccggga agtctcattg acatagcgct
      541 ggatcgggta cggaattttc tcgggcgcgt actggacaaa gtggtggttt tgcccggcca
      601 tggggcccag tccacccacc tgccagaaga gccattgcag cacctcgaac tggcctcgca
      661 gatctactgg cagaaagcac ccggttttct cggcaaggta gaggaggatg gcgccagact
      721 cgaaaactga catcggagca ccaccatcca tagggttgtg atcaacgatt gccggtatgc
      781 ggttgttggg tgagatcttc agaaagggtg ggttaaattg atcgcctttt ccgatattga
      841 ccgggatgat ctggtaagta aggctggtct cttcaagaaa cactgtgatc ttgtgaccat
      901 tgggggtagg ccagtagtag agatcgatca tgtatccatt ctcctatctg taaagtaagt
      961 gactgggttg ttccgtgcag gactattcct gcctgcatcg gtattaatat ccacctcaga
     1021 aaggatgcta tcgatgtata aacgtattcg gctgtttgtt ctcacaggca ttattttctc
     1081 tttaaatagt attccatttg ccccacgagc agcgcaagcg gccggctcgg tcataatcag
     1141 tagcccgaac cagggtgcta cgattaccgg tcctgtccgt atctccggga tctacaccaa
     1201 cgcctatagc gtggcgatca gcttcaatgc cggccagatc tacgatgtcc atatggagga
     1261 cagcgacgcc aacgagagcg gcacctggta ctacgattgg acccccgctg gtttctccgg
     1321 caacgtcgag atccgcgtgc gtgccaccaa catcgacgat cgctactgga tttgggcgcc
     1381 ggttcgcacg gtcaacgtga gcatcgccgc ccagcagccg cccgtcgtcg cgattgtcag
     1441 ccctggcgat ggggcaaccg cccacggcat catgcccatc actgtcgcgg cctccgatcc
     1501 ccagggcctt gcttcggtgc aggtccgcat cgattggtgg agttggcaga c
//
LOCUS       DASQSL010000697         2396 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_194820, whole genome shotgun sequence.
ACCESSION   DASQSL010000697 DASQSL010000000
VERSION     DASQSL010000697.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2396
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194820"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            35..967
                     /gene="era"
                     /locus_tag="VE844_07165"
     CDS             35..967
                     /gene="era"
                     /locus_tag="VE844_07165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009616454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HZC01134.1"
                     /translation="MSSIDGCSPHESRCGLVAIVGRPNVGKSTLLNCVLGQKLSITSR
                     KPHTTRYQIVGVKTTGGVQAVYIDTPGLDGRRDRALSRYMNREAMRALAEVDVIVFMI
                     EALRWIEADRYVLDQIRSTAQPVILAINKVDTVTDKSRLLPFLQELGARLEFAEWIPI
                     SARRSTHIAVLEQAISSRLPLGPHVFPEEQITDRDERFFAGELIREKLMRKLGQEVPY
                     QLSVVVDCFEEKEHVLVIAATIWVERRGQKRIVIGKEGALLKAVGHEARKDMEQLFGK
                     QVFLQTWVKIKEHWSDDARALRELGYSGDSPHAR"
     gene            957..1691
                     /gene="recO"
                     /locus_tag="VE844_07170"
     CDS             957..1691
                     /gene="recO"
                     /locus_tag="VE844_07170"
                     /inference="COORDINATES: protein motif:HMM:TIGR00613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HZC01135.1"
                     /translation="MRVELHPAWVLHQRAYQETSLLLEVFSSQQGRIGLIAKGAKRPR
                     SRLRGILQPFHPLLIAWSGRGDIGTLTQAEPDGPSFTLVGRRLVSGFYLNELLMRLLH
                     RHEAHAALFKSYCEALRLLSRPGAEEPVLRIFEKRLLEAIGYGLVLDHEVASKASIEA
                     ERAYYYQQDKGPWSIPPPCVPAIEIRGQTLIALACERIEDPIALREAKLLMRFVLKPH
                     LGGKPLQSRELFRPVSPPSDKTRSIR"
     gene            complement(1645..2109)
                     /locus_tag="VE844_07175"
     CDS             complement(1645..2109)
                     /locus_tag="VE844_07175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019142508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2269 domain-containing protein"
                     /protein_id="HZC01136.1"
                     /translation="MDYLLMKWLHIVSATLLFGTGLGTAFYLFSANRTRDVHAIAVVA
                     RYVVLADWLFTTPSVILQPITGFVLAHEAGFSLTSTWIVWSLGLYLLAGACWLPVVWL
                     QIRMRDLARCADRDGTPLPPRYWRYARLWTALGFPAFFSVLIVFYLMVAKPA"
     gene            complement(2109..>2396)
                     /locus_tag="VE844_07180"
     CDS             complement(2109..>2396)
                     /locus_tag="VE844_07180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013032306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX-like family protein"
                     /protein_id="HZC01137.1"
                     /translation="YPIAQSLELLEAVGLTGTLALTTLYAASLLDIALGVATLIYPRA
                     WLWGLQLGVVLLYSLIITLCLPGFWLHPFGPLLKNLPILAILLALFYLEER"
BASE COUNT          525 a          655 c          748 g          468 t
ORIGIN      
        1 gtaagagtga ggcgtgaagg gtgaggggtg aggagtgagt tcaatcgatg gctgttcccc
       61 ccatgagagc cgctgtggtc ttgtcgctat tgtcggccgc cccaatgtag gcaagtctac
      121 cttattgaat tgtgtgcttg ggcaaaagct cagcattacc tcgcgtaagc cgcatacgac
      181 ccgctatcag atcgtaggcg tcaaaaccac cggtggtgta caggctgttt atatcgatac
      241 gcccggtctc gatgggaggc gcgatcgcgc cttgagccgc tacatgaacc gcgaagctat
      301 gcgggcgctt gccgaggtcg atgtgattgt gttcatgatc gaggcgcttc gctggataga
      361 ggccgatcgc tacgttctag accagatccg atccacagca caacccgtta tcctggccat
      421 caacaaagtg gatacggtga ctgataagtc gcggctcctg cctttcttac aggagttggg
      481 cgcaaggctg gagttcgccg agtggatccc catctctgca cgtaggagta cgcatatcgc
      541 tgtcttggaa caggcgatca gctcccggtt accgctggga ccccacgtgt tccccgagga
      601 acagatcacc gatcgcgatg agcggttttt tgccggtgaa ctcattcgtg aaaaactgat
      661 gcgtaaactt ggccaagaag tgccctatca gttgagtgtc gtcgtagact gttttgagga
      721 gaaagaacat gtgctcgtta tcgcggcgac gatctgggtc gaacgccgcg gccagaaacg
      781 catcgtgatt ggcaaggaag gcgcactact caaggccgtc ggtcacgagg cgcgtaagga
      841 tatggagcag ctctttggca agcaggtgtt tctgcaaacc tgggtcaaga tcaaagagca
      901 ctggtccgac gatgcgcggg ccttgcggga actcggttat tccggtgatt ctccccatgc
      961 gcgttgaact acaccctgcc tgggtattgc accagcgtgc ctaccaggag accagcctgc
     1021 tgctcgaggt gttctcttct cagcagggcc gcatcggctt gatcgccaag ggcgccaaac
     1081 ggccgcgctc gcggctgcgc gggatactgc agccgtttca ccccctgctc atcgcgtggt
     1141 cagggcgtgg ggatatcggc accctcaccc aggctgagcc ggatggacct tcgtttaccc
     1201 tggtggggcg gagattagtg agcggctttt atcttaatga gctcttgatg cgtctgttac
     1261 accggcatga agcccatgcc gccttattca aaagctactg cgaagccctg cgcctgctga
     1321 gtaggccagg ggcggaggag cctgtgctca ggatctttga aaagcggttg ctcgaggcga
     1381 tcggttatgg tttggtcctc gatcacgagg tggcttccaa ggcctcgatt gaggctgaac
     1441 gggcctatta ctatcagcag gacaaaggcc cctggtcaat accacccccc tgtgtaccgg
     1501 cgattgaaat tcggggccag accttgatcg ccttggcctg tgagcggatc gaagacccca
     1561 tagcactgcg ggaagcgaag ttgttgatgc ggtttgtgct caagccccac ctcggcggta
     1621 agccgctcca aagccgcgag ctattcaggc cggtttcgcc accatcagat aaaacacgat
     1681 caatacgctg aaaaacgcgg ggaaaccgag cgccgtccaa aggcgggcat aacgccaata
     1741 ccggggaggt aggggggttc cgtcgcgatc ggcgcaacgc gcgagatcac gcatccggat
     1801 ctggagccat acgaccggca gccaacaggc gcctgcgagg agataaagcc ccagggacca
     1861 gacgatccag gtgctcgtga gcgaaaaacc ggcctcgtgc gccaggacga atcccgtgat
     1921 cggctggagg atgacgctgg gcgtcgtaaa caaccagtcg gccagcacta cgtaacgcgc
     1981 gaccacggcg atggcgtgga catcccgggt ccgatttgcg ctgaacagat aaaaggcggt
     2041 gccgagcccg gtgccaaata gcagtgtggc cgagacgata tgcagccatt tcatcagtag
     2101 gtaatccatc agcgctcctc gagatagaag agggccaaga ggatagccag tatcggcagg
     2161 ttcttgagca gcggtccgaa ggggtgcagc cagaagcccg gcaaacagag cgtgatgatg
     2221 aggctataga gcagcaccac gccaagttgc agtccccaaa gccaagcgcg cggatagatc
     2281 agggtcgcca cgccaagggc gatatcgagc agactcgccg catagagcgt ggtaagcgcg
     2341 agggtgccgg tgaggccgac tgcctcgagg agttcgaggc tttgcgcgat aggata
//
LOCUS       DASQSL010000698         2918 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_5795, whole genome shotgun sequence.
ACCESSION   DASQSL010000698 DASQSL010000000
VERSION     DASQSL010000698.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2918
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5795"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(513..1502)
                     /gene="trfA"
                     /locus_tag="VE844_07185"
     CDS             complement(513..1502)
                     /gene="trfA"
                     /locus_tag="VE844_07185"
                     /inference="COORDINATES: protein motif:HMM:NF018714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid replication initiator TrfA"
                     /protein_id="HZC01138.1"
                     /translation="MPPIDLSQADIIRDPGLREAAISLGLKLSARVPDPAPAPVVPAR
                     VVQFPLFPSDTRPVSNDMARSALFSCIQGKDRRFVKDALLATVEGREIRFTGEQLNQD
                     DHDLLMQMVFMAQYKPLGSWVMAPAYSILQALGRQCGGKQYRELRTDIARLAASMVII
                     RDTATAREKFGHHLIAKAEQDEKSRHWIYRLDPDLRSLYGEMSHTLIDWEQRMALKGK
                     DLARWLQLYIRSHAKPYPVKVATLRDLSGSRAKALKNFRAKLRVALDDLVTIGELSRW
                     EIQPRDLLFVDRGRAISGSQRRHLGRKQHGLRAAEFCLRRPKTRTQSSRAART"
     gene            complement(1545..2741)
                     /locus_tag="VE844_07190"
     CDS             complement(1545..2741)
                     /locus_tag="VE844_07190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008483964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC01139.1"
                     /translation="MDWETLYCPNRRCRLYGDPLPQSRLVKNGSSHGQPQALCRACGQ
                     SVTVRYGTAYWDLNAEPAIFEMAIRALAEGNSLRSTARIVQIDKDTACDWLDRAARHC
                     RKVLLSLWRDLPVTECQLDELWSFVHTKEPHLVMAKRVCETYGDAWIWMAFAPVWRLV
                     LAFVVGKRTQESANLLLHRVAHVTAQRLPLFTSDQLPEYRTALLHVYGQWVQPARNGN
                     RGRFPEPRRVPPPDLLYAQVVKHRRRGHVVGVTTKAIFGKPDAIAVRLAALPTSTTIN
                     TSYVERENLTLRQHNRRLTRKTNGFSRELTWLEKQLWLSLAYYHLVLPHDSLRRHLRA
                     PESTRGQGSKRRWKPVTPAMAAGITDHVWPTQELLSYRVPAAFLDKLQGFDHLFQPIK
                     DTRQGS"
BASE COUNT          612 a          849 c          865 g          592 t
ORIGIN      
        1 tggcttcgca acgacggcat aactgcagca gcacagaggc cgctgcacga cgagatcaag
       61 atgcaaggag cgtcgctcaa tttatcgcag tttgtagaag cgtaaaaaca tgataccgag
      121 ctgaggaaag taatgaccaa gcaaccatag gattcagcta acttactgaa atatataacc
      181 ttgtctcatt tgcacaccaa aaatatggtt aggcaagaaa atcaataggt taggaggact
      241 tacacgttat ctggaagatg ctcgccacac gtttgccccc ccactacaaa ctgcgataaa
      301 ttgagcgttc agggttggga tttcttccta gcaccgaaag agagaaaaaa gcaagcacca
      361 gcgcgcagga ttagtaacga ttaaagaacg attaggggca gcgtgagttg gccagaagca
      421 attgaatttg cggcattgta gagattattt ggcaaggcga tggctgctct aagtccgata
      481 tgcggctgct ccaggtacgc tacgccgctg ctttaggtcc gagcggcgcg gctgctctgg
      541 gtccgtgttt tcggccgacg caggcaaaat tcagctgctc taagtccgtg ttgttttcgc
      601 cccaggtgcc gcctttggct cccgctgata gcccggccac ggtcgacgaa tagcagatcg
      661 cgcggttgaa tctcccagcg cgagagttcc ccgatggtca ccagatcgtc gagcgccact
      721 cggagcttgg cgcgaaagtt cttgagcgct ttcgcccggc tgccgctcag atcgcgcagt
      781 gtcgccacct tgaccgggta gggcttcgcg tggctgcgga tatagagttg cagccagcgc
      841 gccaagtcct tgcccttgag cgccatgcgc tgctcccaat cgatcagggt atgcgacatc
      901 tcgccgtaga gggagcgcag gtcgggatcg agccgatata tccaatggcg gcttttctcg
      961 tcctgctcgg ccttggcgat caaatgatgg ccgaatttct cgcgcgccgt ggccgtatcg
     1021 cggatgatga ccatgctggc cgcgaggcgc gcgatatcgg tacgcagctc ccggtattgc
     1081 ttgccgccac attgccggcc caacgcctgc aggatgctgt aggccggggc catgacccag
     1141 gagccgagcg gcttgtattg cgccatgaac accatctgca tcaaaaggtc atgatcgtcc
     1201 tggttgagct gctcacccgt gaagcggatt tcccggccct cgaccgtggc caggagcgcg
     1261 tccttgacga agcgccggtc cttgccctgg atgcagctaa agagcgccga gcgcgccatg
     1321 tcgttcgaca cgggccgtgt atcgctcggg aacagcggga attggacaac ccgggcggga
     1381 acgacgggcg cgggcgccgg atcgggcacc cttgcgctca gcttgaggcc caggcttatg
     1441 gcggcctcac gtaatccggg atcacggatg atatcagctt gtgacaggtc gataggaggc
     1501 atgggctgcc ccttatgtgg agtgctaaat tccagtagtg tccctcaact gccttgacgg
     1561 gtgtccttga ttggttgaaa caagtggtcg aagccctgca gcttgtccag aaaggcagcc
     1621 gggacccgat acgacaggag ttcttgggtc ggccagacat gatccgtgat cccagccgcc
     1681 atcgctggcg tcactggctt ccagcgccgt ttcgatccct ggcctcgggt ggattcaggg
     1741 gcccgcaggt gccgccgcaa gctgtcgtgg ggcagcacca gatgataata cgccaaggac
     1801 agccagagtt gtttttccag ccaggtcaac tccctgctaa agccattggt cttgcgtgtc
     1861 agtcgcctgt tgtgctggcg caacgtcagg ttctctcgct ccacatagct ggtgttgatg
     1921 gttgtgctgg tgggcagcgc cgccaggcgg acggcgatgg cgtcgggctt gccaaaaatc
     1981 gccttggtag tcacccccac gacgtgtcct cggcggcggt gtttgacgac ctgagcatag
     2041 agcaaatccg gcggcgggac gcgtcgcggc tcggggaaac gccctcgatt cccgttgcga
     2101 gccggttgca cccactgtcc atagacgtgc agcagggcgg tgcgatactc gggcaactgg
     2161 tcgctggtga acaacggaag cctctgagcg gtaacgtgcg cgacacggtg cagcaacagg
     2221 ttcgcactct cctgggtgcg tttgccgact acaaaggcca gcaccagccg ccagactggc
     2281 gcaaaggcca tccaaatcca cgcatcgcca taggtttcgc acacccgctt ggccatgacc
     2341 aggtggggct ccttggtatg gacaaagctc cacaactcat cgagttggca ttcggtgacg
     2401 ggcaagtccc gccacagaga cagcaggacc ttccgacaat gccgagccgc ccggtccaac
     2461 cagtcacagg ccgtatcctt gtcaatttgc acaatccggg cggtgctccg cagcgaattg
     2521 ccttcggcca aggcccggat cgccatctcg aatatcgccg gttcggcatt caaatcccag
     2581 tacgccgtcc cgtaccgcac cgtcacgctc tgcccacaag cccgacacaa cgcctgtggc
     2641 tggccatgac tggagccatt tttgaccagc cggctttgag gaaggggatc tccatacaat
     2701 cgacagcggc gattcggaca ataaagcgtc tcccagtcca tcgtatcctc ccggagcact
     2761 gtatcagcag tccgttgagg atacggtcag acagggtcat caggctatct catcaaggca
     2821 gttgagggac actaccgaaa atagcccctc gatttttatc cgcggtggtg agcagcactc
     2881 atgagctact gctggcgaag tctgaaagac gtgtgatt
//
LOCUS       DASQSL010000699         1221 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_156478, whole genome shotgun sequence.
ACCESSION   DASQSL010000699 DASQSL010000000
VERSION     DASQSL010000699.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1221
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156478"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..194)
                     /locus_tag="VE844_07195"
     CDS             complement(<1..194)
                     /locus_tag="VE844_07195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015787559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HZC01140.1"
                     /translation="MNPDWHSGNAADDGRHTRGWILGHFIDSSEGVRSTKDVEIKWAT
                     HPTGEKRTAWTKDDQRTTMVL"
     gene            complement(191..>1221)
                     /locus_tag="VE844_07200"
     CDS             complement(191..>1221)
                     /locus_tag="VE844_07200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015103127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HZC01141.1"
                     /translation="LTCPEWLDLDCLLLGPNDRLTLAGTASGDEASLDGQAVDSAVQR
                     LVETLALSVRLTNMPLYQLQDVDIKERHIAGTVSVAPFVEYALTMDLLESELIDAISA
                     GFSTRRGLLPLRDRYLPDTDSVLDLSDRMCAGGVLALCAIARPASLRGGADYLLIVQE
                     RSGVVLNAARKLAVIPKGFHQPLTDIREDTPVGATLQREMEEELFGREDIDNTVTDLR
                     SIDPMHPSRLSEPMRWLTGIPGALRMECTGFGLNLVSGNYEFASLIVIDDEDFWRQYG
                     GRIEANWESSTVRRYSSLDSSLLTELIGEVAWSNEGLFALLQGLRRLSQIGGHRVNLP
                     AIEWEIRS"
BASE COUNT          236 a          358 c          361 g          266 t
ORIGIN      
        1 aggaccatgg ttgttctttg atcatctttc gtccacgcgg tacgtttctc tcccgtgggg
       61 tgggttgccc atttgatttc tacgtctttt gtcgatcgga ctccttcgga gctgtcgatg
      121 aagtggccga gtatccaacc gcgggtgtgc cgtccatcat cggcagcgtt cccgctgtgc
      181 cagtcagggt tcacgatcgt atctcccatt cgatcgccgg caggttcact cggtgcccac
      241 caatctgtga gagccgccta agtccttgca gcagtgcaaa cagcccctcg ttgctccagg
      301 ctacctctcc gatcagctcg gtcagtaagg agctgtccag gctggagtag cgacgtacgg
      361 tcgatgactc ccagttggct tcaatccggc caccgtactg acgccagaaa tcttcgtcat
      421 cgatgacgat cagggaggcg aactcgtagt tcccgctgac gagattcaac ccgaaaccgg
      481 tgcactccat cctcagcgca ccaggaatcc cggttaacca cctcatcggc tcggacagcc
      541 gacttgggtg catcgggtcg atgctgcgta aatcggtgac cgtgttgtcg atgtcctcac
      601 gcccgaagag ctcttcctcc atctctcgtt gcagcgtggc gccgaccggg gtgtcctctc
      661 ggatgtctgt caacggttga tggaaccctt tagggatgac agcgagttta cgcgcagcgt
      721 tgagcacgac cccggaacgc tcttgcacga ttagaaggta gtcagcgcca ccgcgaagac
      781 ttgctgggcg ggcgatcgcg cacaatgcga gaactccacc cgcgcacatg cggtcggaga
      841 ggtcgagaac ggagtctgtg tcgggaaggt acctgtcccg aaggggcagc aggccgcgcc
      901 gagtggagaa accagccgag atcgcgtcga tcagctcgct ttccagcaga tccatagtga
      961 gggcatattc cacgaatggt gcgacactga cagtgccggc aatgtgacgc tctttgatat
     1021 ccacgtcctg gagctggtac aaaggcatat tcgtgagcct tacgcttagc gccagtgtct
     1081 cgacgagtct ttgtaccgca gaatctacag cttggccatc cagcgatgct tcgtcgcccg
     1141 atgcggtacc ggcaagggtg agccggtcgt ttgggcccag gagcaggcag tcgagatcga
     1201 gccattctgg gcaggtgagg a
//
LOCUS       DASQSL010000700         1061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_142754, whole genome shotgun sequence.
ACCESSION   DASQSL010000700 DASQSL010000000
VERSION     DASQSL010000700.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1061
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142754"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..363)
                     /locus_tag="VE844_07205"
     CDS             complement(<1..363)
                     /locus_tag="VE844_07205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005440591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01142.1"
                     /translation="MDAKPIVLKVLLQQRHLQTHRAFCREYDRVAAKADPTLRGGWPS
                     KAQFYRWLSGELVGLPYPDHCRILERMFPDWKVDQLFQTNDGGIDFVPEPPSLAKAPT
                     VQPVSQIKSNNSTGQSEHL"
     gene            565..1044
                     /locus_tag="VE844_07210"
     CDS             565..1044
                     /locus_tag="VE844_07210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013227703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01143.1"
                     /translation="MAIPRGYRFDIAFDSAFPQGLVLIGDVAPDNEYQTREDNPAGRP
                     VRQKIDQVTGQRQWNATVTDPDEPTAKRASFEITLIAAIQPVPTTTEVLPGMRPIQLD
                     GLTAEPRVAGNGEFKYQSYIYRATGFTATASAAGTRPAPSIKPSGAAGSGEQPGKAA"
BASE COUNT          247 a          313 c          312 g          189 t
ORIGIN      
        1 aagatgttca ctttgaccag ttgagttatt tgatttgatt tgtgaaactg gctggactgt
       61 cggcgctttc gccaacgagg gtggttcggg tacgaagtca attccgccgt cgttagtctg
      121 aaataattgg tcgactttcc aatcgggaaa cattctctcg aggatgcgac agtgatcggg
      181 ataaggaagt ccaaccaatt caccggaaag ccaccggtag aactgcgcct tgctcggcca
      241 ccctccccgt agagtcggat ccgcttttgc ggcaaccctg tcatactcgc gacaaaaagc
      301 acggtgagtt tgcaggtggc gctgctggag cagcaccttc agcacgattg gcttggcgtc
      361 caacagtggt gaccttcctt cggggccagg gcgagacgag actatcacat tcgcgagact
      421 gcgcgagacc agaggaggac cagatgttcg agaagagacg attgacgagg tccagaacag
      481 acctgacctg gccgaatcta gtgatgtcgc ccgcagacca gggcgacgac cacacagaca
      541 gccaagccag aggagcaaag gttcatggca atccccaggg gataccgatt cgacatcgca
      601 ttcgacagcg cgtttccgca aggcctggtg ttgattggtg acgtcgcacc ggacaacgaa
      661 tatcagacgc gcgaggataa tcctgccggt cgacccgtgc ggcaaaagat tgatcaggta
      721 acgggtcagc gacagtggaa cgccaccgta accgacccgg acgagcccac cgccaagcga
      781 gcctcgttcg aaatcacctt aatcgcagct atccaaccgg ttccgaccac cacagaagtc
      841 ctgccgggca tgcgtcccat ccagctggat gggctgacgg ccgaaccccg agtcgccggc
      901 aacggcgaat tcaagtatca gtcctacatc taccgggcca ccggcttcac cgcgacggcc
      961 agcgctgccg gaactcggcc ggcaccgtcg atcaagccga gcggtgccgc cgggagtggt
     1021 gagcagcccg gcaaggccgc atgagtctcg cgatgagccg c
//
LOCUS       DASQSL010000701         1862 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_100756, whole genome shotgun sequence.
ACCESSION   DASQSL010000701 DASQSL010000000
VERSION     DASQSL010000701.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1862
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100756"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            63..1421
                     /gene="dnaB"
                     /locus_tag="VE844_07215"
     CDS             63..1421
                     /gene="dnaB"
                     /locus_tag="VE844_07215"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013779630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HZC01144.1"
                     /translation="MQTSELALHKLPPQNIEAEQCVLGAILLENDSLLKALEVLKPAH
                     FYRDAHRKIFEAILDLFERSEPIDLLTVSEALRKRSQLEEVGGATYLATLLETIPTAA
                     NIRYHARMVRENAILRSLINVSTEVIAECYEHTEDVEELLDRAERMIFEISEQRVNAA
                     FANLKELLKDSIRYTEQLYERHELITGLPTGFRDFDQLTAGLQPSDLIIIAARPSMGK
                     TAFALNIARNAGVRLREPRQAVAIFSLEMSKEQLAMRMLCAEARIDSSRLRRGYLDKQ
                     EWGRLVNAANELSDMPVFIDDSPGLSALDIRAKARRLQAEHGLGLIIIDYLQLLRGRG
                     RIENRQQEISEISRSLKALAKELRVPVVALSQLSRAVEQRGDRIPQLADLRESGAIEQ
                     DADLIVFIYRDEVYNKDTNQKGIAKLIIGKQRNGPIGDVDLTFLKEYARFETLERRRE
                     PI"
     gene            1605..>1862
                     /locus_tag="VE844_07220"
     CDS             1605..>1862
                     /locus_tag="VE844_07220"
                     /EC_number="2.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014794816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-guanine transglycosylase"
                     /protein_id="HZC01145.1"
                     /translation="MPFRFDILARDPRTQGRLGRIVTPHGELTTPVFMPVGTQASVKT
                     VTPEELLACGAEIVLANTYHLYLRPTHTLIRDLGGLHRFMHW"
BASE COUNT          399 a          547 c          544 g          372 t
ORIGIN      
        1 cgaagtggcc gtgaccaagg aagcataacc ggggagccga cgcaactgtc ggaggcatgt
       61 gcgtgcagac atccgagctg gcgcttcaca agttaccacc gcagaatatc gaggctgaac
      121 agtgtgtgtt aggtgcgatc ctactcgaaa acgactcgtt gctcaaagcc ttagaagtcc
      181 tgaagccggc gcatttctac cgtgacgccc atcgcaagat tttcgaggct attttagacc
      241 tgttcgagcg tagtgagcct atcgatctat taacggtgag cgaagcgctg cgcaagcgca
      301 gccaactgga ggaagtgggg ggcgcgacct acctggcgac gttgctagag acgatcccaa
      361 ccgcggcaaa tatccgttat cacgcacgca tggtgcgcga aaacgccatt ctgcgcagtc
      421 tcatcaacgt ctctactgaa gtcatcgcgg agtgctatga gcatactgag gacgtcgaag
      481 aactcttgga tcgcgccgaa cgtatgatct tcgagatctc ggagcaacgg gtcaatgccg
      541 cctttgccaa cctcaaggaa ttgctcaaag atagcattcg ctacaccgag cagctctacg
      601 aacgccatga gctgattacc ggcttgccca cggggttccg tgatttcgac caattgaccg
      661 caggcctgca accctccgat ctcatcatca ttgccgcgcg tcccagcatg ggaaaaaccg
      721 ccttcgccct gaacatcgcg cgcaacgccg gtgtgcgtct gcgcgagcca cgccaggcgg
      781 tggccatttt cagcctggag atgtcgaaag agcagctggc catgcggatg ctgtgtgctg
      841 aggcgcgtat cgattccagt cgcctgcgtc ggggatatct cgacaaacaa gagtggggac
      901 gtctcgtgaa cgcggccaac gagttatctg atatgccggt gttcattgac gatagtccgg
      961 ggctttcggc tctggacatt cgggccaaag cgcgacgttt acaggccgaa cacggactcg
     1021 gtttgatcat catcgactat ctgcagctcc tgcgcggtcg tgggcgcatc gagaatcgcc
     1081 agcaggagat ctccgagatc agtcgctcgt tgaaggcgct tgccaaagag ctccgggtcc
     1141 cggtcgtggc gctttctcag ctcagccgag cggtggagca acgtggcgac cgcattccgc
     1201 aactggcgga tttacgggaa tcaggtgcga ttgagcagga tgcagacctc atcgtgttca
     1261 tttatcgcga cgaggtctac aacaaggata cgaaccaaaa gggcatcgcc aagctgatca
     1321 tcggaaaaca acgtaacggg ccgatcggtg atgtggatct cactttcctc aaggagtacg
     1381 ccagattcga aacgctggag aggcgtagag agccgatcta ggaggcgccg cgtgctctcg
     1441 gccgtgtgcc ttctctgcag taggggcgct tcacaccggg gtgatgtctt gccgcccgaa
     1501 ggctgtcacc ggccgcaccc ccctgtctgc catgggggtg cagccggcat tggcagcaga
     1561 accgtgaagg gtgcccgcgc gcgcatggat ctgagcctgt gactatgcca tttcgctttg
     1621 acatccttgc acgcgacccg cgaacacagg gccgactcgg gcgcatcgtc accccccacg
     1681 gcgagctcac caccccggtg tttatgcctg tgggtacgca agcctcggtc aaaaccgtca
     1741 ccccggaaga actgttagcc tgtggtgcgg agatcgtcct ggccaacacc tatcacctct
     1801 atctgcgacc aacccacacg ctcatccggg atctcggcgg cctgcaccgt tttatgcatt
     1861 gg
//
LOCUS       DASQSL010000702         3422 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_182891, whole genome shotgun sequence.
ACCESSION   DASQSL010000702 DASQSL010000000
VERSION     DASQSL010000702.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3422
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182891"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(193..1584)
                     /locus_tag="VE844_07225"
     CDS             complement(193..1584)
                     /locus_tag="VE844_07225"
                     /inference="COORDINATES: protein motif:HMM:NF013235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="HZC01146.1"
                     /translation="MSGPKAKPKREVIKHSAAIQIENNITLLQRRAWNVLLYNAYNEL
                     LSEEEHHIRVREVMEVLEFDSKNEAYLKEALEALVSCKVKWNMLDKDGEMEWGVAALL
                     ASAVIKNGVCSYAYSPPLRKRLYNPRMYARLSLSLQNRFSSKYAHTLWEVCADYLGTA
                     REHGETPFIPLEKFRKLVGLSEEMFPQFKRLNDKVIKHAMDEINQVSDLRVTVEYQRQ
                     NRKVTALKFKVRRVLMLPASRQAHLFPDLEDIPVVVKLLTDAGLAHRDAFEVWQEGFG
                     IVEPDKRPADVGENPEEAFTRYVREKIDLLNQRRETGKLSNPSGFLLTAIKKNYGNAK
                     LEQEEKGRARKRREREVQHLEEQKQQVTREMDDALQEVVDQMLDAVPDLLSEAVEALK
                     AERRMPLYNGRKTPQENYRASPVVRITVGQWLESRFPERFAKARQPFVERLDSFEANI
                     DALDDRKVAVTAG"
     gene            complement(2223..2564)
                     /locus_tag="VE844_07230"
     CDS             complement(2223..2564)
                     /locus_tag="VE844_07230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01147.1"
                     /translation="MAKATSPKKTNELLATIQRSASSPATTSPDVPQGPVQPTESEQG
                     TKVLIYFRPEDRKLIRDLSAFLAGQGLRVNDSLVIKSVLRAVRPGDELIAAYHEAIKI
                     DRRRKRPQASQ"
     gene            complement(2591..3154)
                     /locus_tag="VE844_07235"
     CDS             complement(2591..3154)
                     /locus_tag="VE844_07235"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HZC01148.1"
                     /translation="MTIALLAKKGGVGKSTLAILLHEAFRQAGKTVAVRDWDAQGTSN
                     KALDLIGGQKAHAETRYEMLIYDTPPSLVHQATRSAVQHADIALVVTTPSPADLWEAE
                     DAVRFVQTTNPGTIVRVVFNKVRKGTLLSRIVPESAKQVSVPTMGVMLSARECYQHAL
                     GKGWKALDSAAREEVLQLTVALLSLQT"
BASE COUNT          733 a          993 c          871 g          825 t
ORIGIN      
        1 actgagagta tttaaggcca cagcaggtga cgaaacgtcg tccacaggtc gtgtagtcac
       61 aggaaatcac gaggtgagct gctctcaaca ttcgagactc attggtctac cactaaatcc
      121 gatggaatgt gagttttttg accgtacggc cgaaggaggc caccgcgtgc cccccgccta
      181 tatgagtgcg gctcacccgg ctgtcacagc gaccttccgg tcgtcgagtg cgtcgatatt
      241 ggcctcgaag ctgtccagcc gctccacgaa cggctggcgg gccttggcga agcgttcggg
      301 gaagcgggat tccagccact gccccacggt gatccgcacc accggactcg cccgatagtt
      361 ttcctgcggg gttttgcggc cattgtacag aggcatccgc cgctcggcct tcagcgcctc
      421 caccgcctcg ctgagcagat cgggcacggc gtccagcatc tggtctacca cctcctgcag
      481 ggcgtcatcc atctcgcgcg tgacctgttg cttctgctct tccaggtgct gcacctcccg
      541 ttcccgccgt ttccgggcgc ggcctttctc ctcctgctca agctttgcgt tgccatagtt
      601 cttcttgatt gcggttagca gaaaccccga cggattgctc agcttgcccg tctcacggcg
      661 ctggttcagc aggtcgatct tctcccgcac atagcgggta aaggcttcct cggggttctc
      721 gcccacatcc gcggggcgct tgtccggctc gacgatgccg aacccctcct gccagacctc
      781 gaacgcatcg cggtgggcca gcccggcgtc ggtgagcagc ttcaccacca cgggtatatc
      841 ctccagatcg gggaacagat gggcttgccg cgaagcgggc agcatcagca cccggcggac
      901 tttgaacttc agcgccgtga ccttgcggtt ttggcgctgg tactcgactg tcaccctcag
      961 atcggacacc tgattgattt cgtccatggc gtgcttgatg accttatcat tgagccgctt
     1021 gaactgaggg aacatctctt cactgagacc aaccagcttc ctgaacttct caagagggat
     1081 gaacggagtt tccccgtgct cgcgtgcggt tcccaggtaa tcggcgcaca cctcccagag
     1141 tgtgtgcgca tacttgctgg aaaatcggtt ctgcaggctc aggctgaggc gggcgtacat
     1201 cctggggtta tacagccgct ttcgcagcgg agggctatag gcataggagc acacgccatt
     1261 cttgatcacc gccgatgcca gcagcgccgc aaccccccat tccatttccc cgtccttatc
     1321 cagcatgttc cacttgacct tacagcttac aagcgcctcc aaagcctcct tgagatacgc
     1381 ctcgttcttg ctatcgaact ccaggacctc catcacttcc cttacccgga tgtggtgttc
     1441 ttcctcggag agcaattcat tgtaggcgtt atagagcagc acattccagg cgcggcgctg
     1501 caggagggtg atgttgttct cgatctggat ggcagcactg tgcttgatga cctccctctt
     1561 cggtttcgcc ttgggtccgc tcatggccgc tctgtccctc ccagtttcca ccgcatggag
     1621 catatggaaa agtccccgct cagtcaaaat aaatggggac ctattctccc atatctgcat
     1681 accctcctgg aacatctttg tttttcaatg gctccaatga ctttcccgat tccaccccat
     1741 aaacggggac ctttcacccc ataaacgggg acctttccga aaatttcttg tttttcaatg
     1801 accccataaa tggggacctt tcctttaaag ggctatcctc caccccataa atggggacct
     1861 ttcaccccat aaatggggac ctttcacccc ataaatgggg acctttccgc tcggaaacgc
     1921 agagccagcg cgcctttcca gccgcctaaa atatttaaaa cttttaaaaa agaacgacga
     1981 cgttatgaga aggccatgga tggggaggcc tgcgctggtt cgcggttcat gtctatacct
     2041 cttccccggc gctgcagtga ttgcgacatg acctcgacga attgtttcat ggatggggga
     2101 gtcctcagcg gatggtagta tccgcgagga caggaaggtt atacctcagc tgtaagcaaa
     2161 aaggtaggga aaaatatact acgtatacaa taaatatatc ctatatagta tatacaatat
     2221 agctattgcg aggcttgggg cctcttgcgc cgccggtcga tcttgatcgc ctcatggtaa
     2281 gcagcaatca gttcgtcacc cggacggact gcccggagta cactcttaat gaccaggcta
     2341 tcattgacac gcagtccttg cccggcaaga aaagcggata aatcccggat cagcttgcga
     2401 tcttcggggc gaaagtagat gagcacctta gtcccctgct cgctttccgt gggctgcaca
     2461 ggcccctggg gcacgtcagg cgaggtggtg gctggtgacg atgcagaccg ctgaatcgtg
     2521 gctaataatt cgttggtttt cttaggcgag gttgcttttg ccatatagta tatactttat
     2581 ataaattata ttacgtctga agcgaaagga gggcaaccgt gagctgtaag acctcctcac
     2641 gggccgcgct atcgagcgct ttccagcctt tacccagggc atgctggtaa cattcgcgag
     2701 cggagagcat cacgcccata gtgggcacac tgacctgttt ggcactctct ggcacaatac
     2761 gactcagcaa ggtacccttg cgcaccttgt taaagaccac acgaactatt gtacctggat
     2821 ttgtcgtctg aacaaagcga actgcatcct cggcttccca gagatcagca ggtgagggcg
     2881 tggtcaccac cagggcaata tcggcatgct ggactgccga cctcgtggcc tgatgtacca
     2941 agcttggcgg cgtatcataa attagcattt cgtagcgtgt ctctgcgtgg gctttctgtc
     3001 ctccgatcaa atcgagcgct ttgttgctgg tcccctgcgc atcccaatca cgcaccgcca
     3061 ccgttttccc agcttggcga aaggcttcat ggagaaggat ggccagcgta ctcttcccga
     3121 cccctccttt ttttgccagg agcgcaatag tcatgattgt cgcgcacgcg caatagttaa
     3181 catatattat atatacttta tatcatttaa aggcaatata tacaatagca gatgacatga
     3241 gaggtgtcaa agacaccacg taagattacc cgcgtttccg tcataaatct cgccaaaatt
     3301 tcctgggtca tcgctgcttt tagcgagatg gagtgagagc agggagtcta ggatctatcg
     3361 taaatttcca tcctggagct aatttctgaa aatcgcctat caagaaacca attacttacg
     3421 gc
//
LOCUS       DASQSL010000703         1444 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_182900, whole genome shotgun sequence.
ACCESSION   DASQSL010000703 DASQSL010000000
VERSION     DASQSL010000703.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1444
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182900"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            198..389
                     /locus_tag="VE844_07240"
     CDS             198..389
                     /locus_tag="VE844_07240"
                     /inference="COORDINATES: protein motif:HMM:NF025180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC01149.1"
                     /translation="MISSFVEHFSELQDPRIERKKLHALMDILVLTVCAVASGAEGWE
                     GIAEFGPGSSWSGCGDSFP"
     gene            386..913
                     /locus_tag="VE844_07245"
                     /pseudo
     CDS             386..913
                     /locus_tag="VE844_07245"
                     /inference="COORDINATES: protein motif:HMM:NF033564.0"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
     gene            1008..1127
                     /locus_tag="VE844_07250"
                     /pseudo
     CDS             1008..1127
                     /locus_tag="VE844_07250"
                     /inference="COORDINATES: protein motif:HMM:NF033564.0"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
BASE COUNT          333 a          368 c          443 g          300 t
ORIGIN      
        1 aaaacagatt tatcttgaaa acgtaatact tatcaaggct tatcacaaca cccgtcctct
       61 cgccccacag ggttatgtcg ggcgttacag tggagacttg agactatgaa tagagatcgc
      121 tgtcagggca aacgcattaa aaatgcttta caaacagtag ggtaatagat tctcattgga
      181 tttttttgga gagtccgatg attagcagtt tcgtagagca tttctcggag ttgcaagacc
      241 cccgaatcga gcgcaagaag ctccatgcgt tgatggacat tctggttctt actgtctgtg
      301 cggtggccag tggagcggaa ggctgggagg ggattgcaga atttgggccc ggctcaagct
      361 ggagtggctg cggcgattca ttcccctgaa aaacggcgtg ccttcccatg actgtattgc
      421 ctatgtcatc tcccggttgt ccccggaagg ttgtcggcgt tgctttatga gttggaccga
      481 gggggtaggg gagaagaccg cgggcgaagt gatcgcggtg gatggcaaaa ccgcccgtgg
      541 ctcgcgggat cgggcgaaga accgcaatcc gctgcacacg gtcagcgctt gggcgaacgc
      601 caaccggctg gtgctcgggc aggaagcgac cgaggagaag tcgaatgaga tcaccgccat
      661 cccgaagctg ttggcattgc tggacctgca cgggtgcatc gtaaccatcg atgcaatggg
      721 ctgccaacga gccattgcgg agagaatcgt cgatcagggc ggtgactacg tgctgggact
      781 caaggggaat caaggttcgt tgcacgaggc ggtggaagag tacttcacga ccgcccaagc
      841 cgccgacttc aagaacgttc cgtacagcta caccgaggag gttgacaacg aacatggccg
      901 attggagatt cgacggtact ggataaccga ggatctttgc cccctgccgc gaacggaact
      961 ctggaaggga ctgcgcgagt cacggcctgg tggaacggga gtgctgggtg ggcgaaaccc
     1021 ggagcatcga gcgacgctac ttcatcaact ccatcgccgc ggacgccaag cagtttgccc
     1081 ctgcggtgcg ggggcactgg agcgtggaaa accgtctgca ctggcggcta gatgtggtgt
     1141 ttcgagaaga tgaaagccgc ctccgcaagg gcaacgcacc ccatcatgac ggcaatctga
     1201 cacctatgcg tgaatctgtt tcagaaggag ccttccaacc tcagtctcaa gaagaagcgc
     1261 ctgaaggccg cctggagtga tgatttccgc ggtaaggtat tgtttgccta aaaattttaa
     1321 tgcgtttgcc ctggcccgcg cacgacctaa atctcgatcg gcaggtcgcc atcaaagagt
     1381 acttaccgat cgagaccgcg gtgcgcgagg gggccgtttt tatttatccg ctcacatccg
     1441 agcg
//
LOCUS       DASQSL010000704         3171 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_182911, whole genome shotgun sequence.
ACCESSION   DASQSL010000704 DASQSL010000000
VERSION     DASQSL010000704.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3171
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182911"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1768
                     /locus_tag="VE844_07255"
     CDS             <1..1768
                     /locus_tag="VE844_07255"
                     /inference="COORDINATES: protein motif:HMM:NF016251.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HZC01150.1"
                     /translation="ARMRARDFIGAASEYLRLAQASRAPASHKYALHAAEAYLAGRRV
                     DEAKQLLIRLQIPADEVDLNSWKKLLWARVALLKNDPREALAILDTLRGVKVPTSFRK
                     AFHHYRAEAYSIKGDFLKVAHEHILLHALLTDPNEQRKNQHAIWEAVNSLKLATLSRR
                     LPAELNTLRGWMELAIIIKSPHPDSLAFKQSLDHWQQRFPDHPATQEILANLIEISPN
                     LYPEVKRIALLLPLTGKFAEAATAIQDGFITAWYNDSNTNRRPLVNVYDTNTPSIDEV
                     YQTAVDEGADLVVGPLEKPTIEALVRRDSLPVTTLALNQLDLSPAGIPSWTPKHDKLY
                     QFSLSPEDEARQIAERAWLDGHMRAIALTPESEWGKRVFKAFEQRWETLGGQLLTHRS
                     YTPNKENYSLLAREVLQTVGSKPLIAEARAAAGGEHSEPRPRRDADFVFLAGFPGEIR
                     QIQPDLVSHSRGTLPVYSTSHVYSGVINRSIDSPLNGIIFGDMPWILSPSPEDSTELR
                     DTVLRNWPKTARTYPRLYAFGIDAYHILPQIELLRAHAFARFVGETGRLRMDQYGRIH
                     RQLSWARFANGMPTLLGENPPR"
     gene            1765..2154
                     /locus_tag="VE844_07260"
     CDS             1765..2154
                     /locus_tag="VE844_07260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008111406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HZC01151.1"
                     /translation="MISARTQHSRQRGQWAEAITAAYIKAQGLRELKRNYRCPAGEID
                     IIMQYQTTLVFVEVRYRANDRYGHALETIIPRKQRRLLKAAWHYLQTRPRTARLPARF
                     DVVTVGGEQEKPTLEWIKGAFEASFHA"
     gene            2199..2810
                     /locus_tag="VE844_07265"
     CDS             2199..2810
                     /locus_tag="VE844_07265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012077201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HZC01152.1"
                     /translation="MDPIEYVKQICNANRQVIEESSEVLAPSIVQAAQQLSRCLLNEH
                     KILTCGNGGSAAQAQYLAAKMLSRYEMERPGLPSIALTADASTLTSIATDYQFADIFA
                     KQIRALGQANDIVVVISTSGESDTIINAIDAAHDREIGVVLLNGADGGRAARILTEED
                     IELRVPSWSTARIQEVHLMIIHCLCDLLDRQLLGLEEITSDAL"
     gene            2800..>3171
                     /locus_tag="VE844_07270"
     CDS             2800..>3171
                     /locus_tag="VE844_07270"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HZC01153.1"
                     /translation="MHYNPYLYVVLLLLSLGILPGCGLFIAGGVATGAVIAHDSRTTG
                     TLIEDEAIELKASKAIAEDEELASSAHINVTSYNTKVLVTGEVPTEALQERVIAIVRT
                     IEKVQDVYDEITLAKPSSLGSR"
BASE COUNT          726 a          928 c          850 g          667 t
ORIGIN      
        1 ggctcggatg cgggcgcgag atttcatagg cgcagccagc gagtacctgc gtctggccca
       61 agcgtcccga gcgcccgcga gtcataagta tgctttacac gccgctgaag cctatctggc
      121 aggccgccgt gtcgatgagg ctaaacagct tctgatcagg ctccagatcc cggccgatga
      181 agtggatcta aacagctgga aaaagctgct ctgggcccgt gtcgccttgc tgaagaacga
      241 tccccgcgag gctctagcca tcttagatac gctccgcggt gtcaaggttc ctacctcctt
      301 cagaaaggca tttcatcact atcgcgcgga ggcttacagc atcaagggcg attttttgaa
      361 ggtggcccac gaacatatct tgctacacgc tctgcttacc gatccaaatg agcagcggaa
      421 aaatcagcac gcgatctggg aagccgtcaa tagcctcaaa ctcgctaccc tctcgcgccg
      481 cctgcccgcc gagttgaata ccctgcgcgg ctggatggaa cttgccatca tcatcaaatc
      541 accgcacccg gactcccttg ccttcaagca gtccctcgat cactggcagc agcgtttccc
      601 cgatcatcct gctacccagg agatcctggc aaacctcatc gagatcagtc cgaacctcta
      661 ccccgaggtt aaaaggatcg cgctcttatt accgctgaca ggcaaatttg ccgaggcggc
      721 cacggctatc caggatggct ttatcaccgc ctggtataat gattcgaaca ctaatcggcg
      781 gccgcttgta aacgtctatg ataccaacac cccaagtatc gatgaggttt atcaaaccgc
      841 ggtcgatgaa ggtgccgatc tcgtggtcgg ccccttggag aagccgacca tcgaagcgtt
      901 ggtgagacga gatagcctgc cggtcactac ccttgcgctc aatcaactcg acctctcccc
      961 tgccggcata ccgtcgtgga ccccaaagca cgacaaatta tatcaattta gcctgtcacc
     1021 ggaggatgaa gcgcgacaga tcgccgagcg ggcctggctc gacggccata tgcgagccat
     1081 cgcccttacc cccgagagcg aatggggcaa gcgggtattt aaggctttcg agcagcgctg
     1141 ggaaaccctg ggtggccaac tgctcacgca tcgcagctac acgcctaaca aggagaatta
     1201 ttcgctgctg gccagggaag tgttgcagac ggtaggaagt aaaccgctta tagccgaagc
     1261 gcgcgcggca gcgggggggg agcattccga accccggcct cgccgagacg ccgactttgt
     1321 cttcctggcc ggttttcctg gggagatacg acagatccag ccggatctcg tatcccatag
     1381 ccggggcacc ctccctgttt actccacctc gcatgtctat tcgggggtga ttaaccgatc
     1441 catagatagc cccttaaacg gtatcatctt cggtgatatg ccttggatcc tcagcccatc
     1501 gcccgaagat tctacagagc ttcgcgatac cgtcctgcgc aattggccaa aaaccgcgag
     1561 gacgtatccg cgattatatg cctttggcat cgatgcctac catatcctcc cccagatcga
     1621 actcttgcgc gcccacgcgt ttgctcgctt cgtaggggag acaggccgtt tgcgaatgga
     1681 ccaatacggc cgcatccatc ggcagctgag ctgggctcgc tttgccaatg gcatgcccac
     1741 cctcttagga gagaaccccc cacgatgata agtgcccgga cccagcattc ccggcaacgg
     1801 ggccaatggg ctgaagcgat caccgccgct tatatcaagg cgcagggctt acgtgaatta
     1861 aaacgcaact accgctgccc cgcgggggag attgatatta tcatgcaata ccaaacaacg
     1921 ctggtttttg tggaggtccg gtatcgggcc aatgaccgct atggccatgc gctagagacc
     1981 attataccgc gtaagcagag gcgcctctta aaggcggctt ggcattacct ccaaacccgc
     2041 ccccggacag cgaggctgcc cgctcgattc gatgttgtca cggtgggtgg agaacaagaa
     2101 aaacccacgt tggaatggat caaaggcgcc ttcgaggcgt cttttcatgc gtgagcgctg
     2161 catgtcctag atttcaatgc tccttggacg aataacccat ggatccgatc gaatacgtca
     2221 aacagatctg taacgctaat aggcaggtta tcgaggagag tagcgaagtg ctcgctccat
     2281 cgattgtcca ggcggcccag cagttatcgc gctgtttact caacgagcat aagatcctga
     2341 cctgcggaaa cggtggctcg gccgcccaag cgcaatatct tgctgccaag atgctgagcc
     2401 gttatgagat ggaaaggcca ggattgccat ccatcgcctt gacggcggat gcttcgaccc
     2461 tgacctccat agctaccgat tatcagtttg ccgatatctt cgccaagcag atccgggctt
     2521 taggccaagc taacgatata gtagtggtta tttcgaccag cggtgaatcc gatactatca
     2581 ttaatgcaat cgatgctgcc cacgatcggg aaataggcgt cgtgctattg aatggcgccg
     2641 atggtgggcg tgccgcccgg atcctaactg aagaggatat cgagctgcgg gtgcccagct
     2701 ggtcgacggc gcggatccag gaggtccatc tcatgattat ccattgcctg tgcgatctct
     2761 tggatcgcca gctcctgggg ttggaggaga tcacctcaga tgcactataa tccatacctg
     2821 tatgtcgtgt tgctactctt atcattgggt attctgccag gatgcggcct ctttatagcc
     2881 ggcggtgtgg ccacaggagc cgttatagcc cacgatagcc gcaccacagg taccctgatc
     2941 gaggacgaag ccatcgagct caaagcaagc aaggctatcg ccgaagatga ggaactcgcc
     3001 tcatcggccc atattaatgt aaccagctac aataccaagg tattagttac cggagaggtg
     3061 cctacggaag cgctgcaaga acgggtgatc gctattgtgc gcacgatcga gaaggtgcaa
     3121 gacgtatatg acgagatcac ccttgccaaa ccgagctctc tgggttcccg c
//
LOCUS       DASQSL010000705         1057 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_100776, whole genome shotgun sequence.
ACCESSION   DASQSL010000705 DASQSL010000000
VERSION     DASQSL010000705.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100776"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..466)
                     /locus_tag="VE844_07275"
     CDS             complement(<1..466)
                     /locus_tag="VE844_07275"
                     /inference="COORDINATES: protein motif:HMM:NF026010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01154.1"
                     /translation="MSHISRTLAGAYRANWRDPSGRQRAKTFPTKKAARQFLAEIDSS
                     MTRGLYVDPHAGRTLFTDHATKWLDSHNTEVTTAARDVSVMRTHVLPQWGSWPLNKID
                     HAAVQAWVTEVGRRRSPDVVAKCYRPIIEVSGQTSFKPFPKSTAGRRTVPLPL"
     gene            complement(468..716)
                     /locus_tag="VE844_07280"
     CDS             complement(468..716)
                     /locus_tag="VE844_07280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013871634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC01155.1"
                     /translation="MATNVIPLDMASFDSSDPISLKDLPGPETYTVLEVAARLGIGRC
                     MAYELVRQGIIPVKRLGRRWIVPRARFHVWLNEYSQGA"
     gene            complement(853..>1057)
                     /locus_tag="VE844_07285"
     CDS             complement(853..>1057)
                     /locus_tag="VE844_07285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004986821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="replication initiator"
                     /protein_id="HZC01156.1"
                     /translation="TYGRLRRWAHMLGFGGHFATKSCRYSTTRTALKTARRQWRRAHH
                     YAGVLNTTLLTTPMRKPPSSSAH"
BASE COUNT          214 a          295 c          330 g          218 t
ORIGIN      
        1 acaacggaag ggggaccgta cgccgaccgg ctgtgctctt gggaaagggt ttgaagctgg
       61 tttggccgct aacttcgatg atgggtcggt aacacttggc gacgacatca ggtgatcgcc
      121 gcctgccaac ttccgtcacc cacgcctgca ccgctgcatg gtcgatctta ttgagtggcc
      181 agctccccca ctgcgggaga acatgggtcc gcatgaccga cacatcgcgg gctgcggtcg
      241 tgacctccgt gttgtggctg tcgagccact ttgtggcatg gtcagtgaac agtgtccgcc
      301 cagcgtgtgg atcaacgtag agaccgcgcg tcatcgatga atcgatctcg gcgaggaact
      361 gccgcgccgc cttcttcgtc ggaaaggtct ttgcacgctg ccgtccggat ggatctcgcc
      421 aattcgcgcg ataagcaccg gccaaggtgc ggctgatatg ggacatctca agccccttgg
      481 gagtactcgt tgagccagac atgaaaccgc gcacgaggca caatccaccg gcgacctaac
      541 cgcttgacag gaatgatgcc ctggcgtacg agttcataag ccatgcatcg accaatgcca
      601 aggcgggccg caacctcaag gactgtgtac gtctcaggtc cagggaggtc cttcagcgag
      661 atcggatcac tggaatcgaa actcgccata tcaagtggaa tgacgttggt tgccactgtt
      721 aaagctcctt tcaagctacg gattgggtca agcattcttg cttagcgatt cgccgttgtt
      781 cacgggcttg agcggcagcg gtcagagcaa gccaccggtc tccagtactg cggtagccga
      841 ttccggcgaa agtcagtgcg ccgacgacga gggtggtttc ctcatcggtg tggtcagtag
      901 tgtggtgttc agcacgccgg cgtagtgatg ggcgcgacgc cattggcgac gagccgtttt
      961 gagtgcggtt cgggttgtgg agtagcggca agatttagtc gcgaaatgtc cgccgaaacc
     1021 gagcatatga gcccaacggc gcagccgccc ataggtg
//
LOCUS       DASQSL010000706         1234 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_182942, whole genome shotgun sequence.
ACCESSION   DASQSL010000706 DASQSL010000000
VERSION     DASQSL010000706.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1234
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182942"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            46..1095
                     /locus_tag="VE844_07290"
     CDS             46..1095
                     /locus_tag="VE844_07290"
                     /inference="COORDINATES: protein motif:HMM:NF024799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HZC01157.1"
                     /translation="MQEMLTRGKFLKVTGSGLAGMAVLGVAGCAGGAGGGQGGSKGAT
                     IGLSLETLESPFWVAARDAIREEAKARGWTVKEAVADGDPNRQTQQVQTFVSQQVDGI
                     ILIPKDEDTAMPMIQSADQAGIHIVLFNRAPAQIDDRSTTITANDYDITVDTSEYLVQ
                     QAEKTPPPGGGQHQAMILIGDLGDPNAVERRDGFLDTVGKHPDLIEVVAKVPTQWDLE
                     VARSGSVNALQANPDVSLIFTSSDFLFPSLIQAMKGAGKYHKSGEEGHVILAGFDGDA
                     RAYKMLQDKYLDATGVQDVFFESKKSIEAIAMDLEGKNPPVEITDKGFVIHQDNLAEK
                     EGEMWGAQIAKGELG"
BASE COUNT          293 a          321 c          401 g          219 t
ORIGIN      
        1 agattaggtg gcgcatccaa gcctaaggaa aaacggggaa ggtagatgca agagatgttg
       61 acacgaggga agtttctgaa ggtcaccggg agcgggttag ccgggatggc cgtgctcgga
      121 gtagcggggt gcgccggcgg agccggcgga ggtcagggtg gttccaaagg cgcgacaata
      181 ggcctgtctt tggagacttt ggagtctcca ttctgggttg ccgcccgcga cgcgatcagg
      241 gaggaggcca aggcccgggg atggacggtc aaggaggcgg ttgcagacgg ggaccccaac
      301 cgtcagactc agcaagtaca gaccttcgtt tcccagcaag tcgacggcat catattgatc
      361 cccaaggatg aagacacggc gatgccgatg atccagagcg cggatcaagc cggcatccac
      421 atcgttctgt tcaaccgggc accagcgcag atcgatgaca ggtctaccac gatcacggcg
      481 aacgactacg acatcaccgt cgataccagt gagtatctcg tccagcaggc ggagaagacg
      541 ccgccgcctg gcggcggaca gcaccaggca atgatactca taggggatct gggcgacccg
      601 aacgcggtcg aacgccggga cggttttctg gataccgtgg gcaagcaccc ggatctcatc
      661 gaggtggtgg cgaaggttcc gacgcagtgg gacctggagg tggcccggtc cggatcggtc
      721 aatgccctcc aagccaaccc tgacgtaagc ttaatcttta ctagctccga cttcttgttc
      781 ccgtccttga tccaggcgat gaagggagcc gggaagtatc acaagagcgg tgaggaggga
      841 cacgtgatcc tagccggttt cgacggggac gccagagcct acaagatgct gcaggacaag
      901 tacctggatg ccaccggggt tcaggatgtg ttcttcgagt cgaagaagtc catcgaggcc
      961 atcgcgatgg atctcgaagg caagaacccg ccggtcgaga tcacagacaa gggtttcgtc
     1021 attcatcagg ataacctcgc cgaaaaagag ggcgagatgt ggggagccca aatagcgaag
     1081 ggcgaattag gatagcagag gctagaccct cacgtgagca accgaagaag gacgtgagca
     1141 tgtggcagtg ttgagcaacc ttcgagagcg actttcattc agacggatct tgctgtccga
     1201 gtacctagtg ctctaccttt gcgtgatcta cttc
//
LOCUS       DASQSL010000707         2068 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_85912, whole genome shotgun sequence.
ACCESSION   DASQSL010000707 DASQSL010000000
VERSION     DASQSL010000707.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2068
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85912"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            255..2000
                     /locus_tag="VE844_07295"
     CDS             255..2000
                     /locus_tag="VE844_07295"
                     /inference="COORDINATES: protein motif:HMM:NF033559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC01158.1"
                     /translation="MIDKIIRLIKVERVDDIPVLLAQVQKMQVPALLDQFFPTHGHWK
                     GELSFGEVVAVWLTFVASQGDHCLSHVQPWVEEHLDTLAASLDKSIRPLDFSDDRLAA
                     MLDAFSEAETWGDFETALNGVVLRVYELESDRIRIDSTSAKTYAGVSEDGLFQFGLSC
                     DHRPDLPQVKISLSALDPLGLPLTTTVVSGRCADDPLYVPEIKRVQQTLGAGGKTYIG
                     DCKMGALQTRALVAGSGDYYVCPLAGKQMPAEELEKLLSPVFSGAQGLEQVYHPQTET
                     PEQPRLIAEGYEVRVELEAELGGQPVQWQERRLVVRSVAHAARQAENLDERLRQAVAE
                     IGQLNERKQGKKLLDAEELKAAAHQIMERRRVAGIVKVETETTTRQTNKRKYGAREAE
                     IRVESQSTISAQIETQAVKEAKQRLGWRVYATNHGMLALVAVIMAYRGQYLIERCFGR
                     FKGKALSLTPLFLQTESRVEGLIRLLSLALRLLILVEFVVRRRLEKAQSKVAGLYPGQ
                     ATRATASPTAELILRAFQGISLTVVEIAGQVRALLSPLSNLHQRLLKLLGLSADIYVR
                     LIQHFLKPALNLSEP"
BASE COUNT          452 a          520 c          647 g          449 t
ORIGIN      
        1 gctgctacgg catagtactc gggcaagtaa gcggatctct ataatgatcc aggtgcctct
       61 gggtagagat tcgaggattt ttctctgctc ttcttctggg agttccgtca tggtcctccc
      121 tccttaggta gaggtaggcg cactcgagaa aaagcgggcc aaagcataat aaccgaaacc
      181 gaaacataaa tcttatagtt cgcttaaacc aaaagcgact tctgagaatt gaaaacgtcg
      241 ggtaatcttg acgtatgatt gacaagatta tccgcctgat taaagtcgaa cgagtcgacg
      301 acatcccggt gttgttggct caagtgcaaa aaatgcaagt tccggccctc ctcgatcagt
      361 tctttccgac ccatggccac tggaagggcg aattgagctt tggcgaggtg gtcgccgtgt
      421 ggttgacctt tgttgcttcg cagggcgatc actgtctctc gcatgtccag ccctgggtgg
      481 aagagcatct cgacacgctg gcggcctctt tggacaagag cattcgcccg ctggacttca
      541 gcgatgatcg gctggcggct atgcttgatg cattctctga ggcagagacc tggggcgatt
      601 ttgaaaccgc actcaatggt gtggtgctgc gcgtctatga gttggagagc gatcggatcc
      661 ggatcgatag cacctcggcc aagacctatg caggagtgag cgaggatggg ttgtttcagt
      721 ttggtctgag ctgtgaccat cgccccgact tgcctcaagt caagatcagt ctctcggcgc
      781 tcgacccgtt gggattgccg ctgacaacga ccgtggtgag tgggaggtgt gccgatgacc
      841 cgttgtatgt gcctgagatc aagcgggtgc agcaaacgct cggggccggc ggcaagactt
      901 acatcggcga ctgtaagatg ggggcgctgc agacacgcgc cttggtcgct gggagtgggg
      961 attattatgt gtgtcccttg gccggcaaac agatgcccgc agaggaactg gaaaagctgc
     1021 tgtcgccggt cttcagcggc gcgcaaggac ttgaacaggt ctatcatccg cagacggaaa
     1081 cgccagaaca acctcggctg atcgccgaag gctatgaggt gcgtgttgag ctggaggcag
     1141 agctgggcgg tcaaccggtg cagtggcagg agcggcggct ggtggtgcgc tcggtggctc
     1201 acgctgcgcg tcaagcggag aacctcgacg agcgactccg gcaggctgtg gctgaaatag
     1261 gccaactcaa tgaacgcaaa caaggcaaga aactccttga cgccgaggaa ttgaaagcgg
     1321 ccgcccatca gatcatggag cgccgtcgcg ttgcgggaat agtcaaggtc gaaaccgaga
     1381 ccacgacgag gcaaactaac aagcgcaagt atggcgcgcg cgaggccgag atcagagtcg
     1441 agagccagag cacgattagt gcgcagatcg agactcaggc cgtcaaagaa gctaagcagc
     1501 gcctggggtg gcgtgtctat gcgactaatc atgggatgct ggcgctggtg gccgtgatca
     1561 tggcttatcg ggggcagtat ttgattgaac gttgtttcgg gcgcttcaaa ggcaaggcct
     1621 tgtcgctgac gccgctgttt ttgcaaaccg agagccgggt ggagggcttg atccggttgt
     1681 tgagcctggc cttgaggctg ttgatcttgg tggaatttgt cgtccggcgg cggttggaga
     1741 aagcccaaag caaggtcgca ggactctatc caggtcaggc cacgcgcgcg actgcctccc
     1801 caacggcgga attgatcttg cgggcatttc aaggcatcag cttgaccgtc gtggagatcg
     1861 ctggacaggt gcgcgcactg ttgtcgccgc tgagtaatct gcatcaacgc ttgctgaaac
     1921 tgctcggctt gtcggctgat atatacgtgc gactgattca gcattttcta aaaccggctc
     1981 tcaatttgag cgaaccgtga gttaacagtt ccagcgtgca agcttccaat cggcggcatg
     2041 tagaggatct ccccttcaat cagctcaa
//
LOCUS       DASQSL010000708         1190 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_142842, whole genome shotgun sequence.
ACCESSION   DASQSL010000708 DASQSL010000000
VERSION     DASQSL010000708.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142842"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            95..1153
                     /gene="rpoD"
                     /locus_tag="VE844_07300"
     CDS             95..1153
                     /gene="rpoD"
                     /locus_tag="VE844_07300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007913240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HZC01159.1"
                     /translation="MVVLGEQLHLPHKLTLLQIINHPKLRAAIDAGLNLELMAQVSEA
                     MDENIAKIRAKTINLSLDSRLLPMDAVDVLKDHTLSQLEEAMNQLGGCAQFQTMDPLL
                     LTYFDRIKAESARAQTHLTEANLRLVVSIAKKYRGRGLALLDMIQEGNIGLLRAVEKF
                     DYRKGYKFSTYAHWWIRQGVTRAIADQGRSIRMPVHMIEITNKLMLQQRRLLQEYGRE
                     PTLEEIGLAMDMGPEKVEEILKLSRVPVSLETPIGEEDSHLEDFIEDVSAPAPADVAI
                     SHLLKEEIQEVMKSLTEREARVLQLRFGLEDGRSRTLEEVGREYGVTRERIRQIEAKA
                     LRKLRHPTHSRKLRDFIE"
BASE COUNT          291 a          298 c          359 g          242 t
ORIGIN      
        1 ggagcaggaa cttgcggggc gagaaggcca gccaacccag ccctgggaaa tcattgttgc
       61 cctgctacgc cgtctggttg ccgctatgcc attgatggtg gtgctggggg aacaactaca
      121 cctaccgcat aagctaacgc tattgcagat aatcaaccat cccaagctac gggcggccat
      181 cgatgctgga ttgaacctgg agttgatggc ccaggtgtct gaagcgatgg atgagaatat
      241 agcgaaaatt cgagcgaaga ccatcaacct gtctctggat agccggctgc tacctatgga
      301 tgcggttgac gtgctgaagg accataccct gagtcaatta gaggaggcga tgaaccagct
      361 cggtggttgc gcccagtttc agacgatgga cccgttgtta ctgacctact tcgatcgcat
      421 taaagccgaa agcgctcgag ctcagaccca ccttaccgaa gctaacctgc ggctagtggt
      481 cagtattgcc aagaagtata ggggccgggg cctggcgctg ctggatatga tccaggaagg
      541 taacattggg ctgctccggg ctgtggaaaa gttcgattac cgtaagggat acaagttcag
      601 cacctacgcc cactggtgga tacgccaggg tgtcacccgc gccattgccg atcaaggccg
      661 gagcattcgc atgccagtgc acatgataga gatcactaat aagctgatgc tacagcagcg
      721 ccggttgctt caggagtacg gtcgggaacc cacgctggaa gaaattgggc tggccatgga
      781 catgggcccg gagaaggtgg aagaaatcct aaagctctct cgggtaccgg tatcgctgga
      841 aacccccatt ggagaagaag attcccatct ggaggatttc atcgaggacg tgagtgcgcc
      901 cgctccggca gatgtggcca tctctcatct tttaaaggaa gaaatccagg aagtgatgaa
      961 aagcttgacc gaacgggagg cccgggtgtt gcaactacgg tttgggctgg aagatgggcg
     1021 gagccgtact ctggaagagg ttgggcggga atatggggtt acccgagagc gcatccggca
     1081 gatagaagct aaggcgttac gtaagctgcg tcatcccact cactcccgta agctgcggga
     1141 ttttatagag taaccgcagc cacgagaagc actctatttc tcgtgctgcc
//
LOCUS       DASQSL010000709         5099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_30427, whole genome shotgun sequence.
ACCESSION   DASQSL010000709 DASQSL010000000
VERSION     DASQSL010000709.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 5099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5099
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30427"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..279)
                     /locus_tag="VE844_07305"
     CDS             complement(<1..279)
                     /locus_tag="VE844_07305"
                     /inference="COORDINATES: protein motif:HMM:NF023236.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3329 domain-containing protein"
                     /protein_id="HZC01160.1"
                     /translation="MSQDILRLAGLYLAAGAVGLIVGQISLLLWIVTLLYVIWQHRNL
                     HRLLRWLQHRKQFEPPEVPGIYEVLCREIDFWRERHKKRKKKLADYIKQ"
     gene            complement(306..992)
                     /gene="phoB"
                     /locus_tag="VE844_07310"
     CDS             complement(306..992)
                     /gene="phoB"
                     /locus_tag="VE844_07310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011638217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon transcriptional regulator
                     PhoB"
                     /protein_id="HZC01161.1"
                     /translation="MMAAILIVDDEPAIRQMLRFALAGAGFSCLEAENAEEAQASITR
                     GPPNLILLDWMLPGISGLDLARRLKRDPETQGIPIIMLTARGEEFDKIKGLGVGADDY
                     VTKPFSVRELIARIKAVLRRSPAKESQASLEVNGLRLDIDTHRVTVGEAPLDLSPTEF
                     RLLHFFITHPERVYSRGQLLDHIWGNNVYIEERTVDVHIRRLRKALAPQGHDKFIQTV
                     RSIGYRFSTQ"
     gene            1219..2622
                     /locus_tag="VE844_07315"
     CDS             1219..2622
                     /locus_tag="VE844_07315"
                     /inference="COORDINATES: protein motif:HMM:NF019042.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OprO/OprP family phosphate-selective porin"
                     /protein_id="HZC01162.1"
                     /translation="MFEGRLTPILGAGLMGWTALASLPVKAANEAMMELLKVLRENGT
                     LSEETYEQLQSAAKADDESNTQGQAEVKSAAQNLPKIETKGKLEWSTPEGDFKWRLGG
                     RIHADTAFYDNDTSTTGEPTGLDDGVDFRRARLVTEATLWRNWQLKFEYDFADDGGVD
                     SGLRDAYLRYLFWGSQPYITVGQFKEYFSLESWSSSNDITFIERALPSRAFSPPDARR
                     LGVGVSTYGQDLWTLSAGVYGKNASGEDIGGVEIEDDPDPLVFVGRLTFSPLHTETRV
                     VHLGVSGSWLDSGNNLVEFRERPEAAIGAERLIDTGEFDVDTLTRYGVEALAIYGPFS
                     VQGEYLLAHVDRDLPGEPDVSFPGWYVYGSWILTGESRTYDFVESRFKNPKPKGIVGK
                     GGIGAWEIAARYSTLDLNDEDIDGGEEENVTVGLNWYPTPVFKFMANYVKVLDIEGGE
                     FNDAEPDIFQLRAQAYW"
     gene            2869..3168
                     /locus_tag="VE844_07320"
     CDS             2869..3168
                     /locus_tag="VE844_07320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019465781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HZC01163.1"
                     /translation="MFMIRKFILALSLLAPTLVFAGNPVDINTADAAALAEVIKGVGP
                     AKAQAIVAYREKHGPFKSVYDLTLVLGIGTKTIENNRDNLTVGVSEAPEAAPSAQ"
     gene            3231..4760
                     /locus_tag="VE844_07325"
                     /pseudo
     CDS             3231..4760
                     /locus_tag="VE844_07325"
                     /inference="COORDINATES: protein motif:HMM:NF019410.4"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1631 family protein"
     gene            4842..>5099
                     /locus_tag="VE844_07330"
     CDS             4842..>5099
                     /locus_tag="VE844_07330"
                     /inference="COORDINATES: protein motif:HMM:NF019410.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1631 family protein"
                     /protein_id="HZC01164.1"
                     /translation="MRAEWGVWLERAKELQVGDTLTLHKGLGNAQCLELTWIGEDHHP
                     YVFADPQGKKACSMSLQALAMQLRSGTITLGDESLSAVDRAL"
BASE COUNT         1229 a         1404 c         1357 g         1109 t
ORIGIN      
        1 ttgtttaata taatcggcga gctttttttt gcgtttttta tgccgctccc gccaaaagtc
       61 gatctctctg cagaggacct catagatgcc aggcacctcg ggcggctcga attgcttgcg
      121 gtgctgcagc caacggagca agcggtgcag gttacggtgc tgccagatca cataaaggag
      181 tgtcactatc cacaacagca agcttatctg gccgacgatt aaacccacgg cgcctgccgc
      241 taaatagaga cccgccaagc gtaagatatc ctgagacaca gaagtgacta tatttataaa
      301 ggaacttact gtgtggagaa ccgataacct atactcctga cggtttgaat aaatttatca
      361 tgaccttggg gagcaagggc cttcctcaac cgccggatat gcacatcgac ggtacgctct
      421 tcaatgtata cattattgcc ccagatgtga tcaagtagct gcccgcggct atagacccgc
      481 tcaggatggg tgataaagaa atgcagcagc cgaaactcgg tggggctcag atccaagggc
      541 gcttctccca cggtgacccg atgggtatcg atatccagcc gtagcccgtt gacttcaagg
      601 gacgcttggg attctttcgc ggggctacgc cggagcaccg ctttaatgcg cgcaatcaat
      661 tctctgacgg agaaaggctt ggtgacataa tcatctgccc caaccccgag tcccttgatc
      721 ttatcaaatt cctcaccgcg cgctgtcaac atgatgatgg gaataccctg ggtctccgga
      781 tcacgcttga gccggcgcgc cagatcgagg ccactgatcc caggaagcat ccaatctaaa
      841 agaataagat tgggcggacc ccgcgtgatc gacgcttggg cctcctcggc attctctgcc
      901 tccagacagg aaaagcctgc acctgcgagg gcaaaccgca acatctgcct gatcgcaggc
      961 tcatcatcca cgattaagat agccgccatc ataggaccta tccgcttttt tagctaatat
     1021 taaatattaa gccactgata ttacaggggt gtgacacacc ctattgttgt gcgtatacaa
     1081 cataatatac ctaaattagg caaattcgta ggtatttata atacactcta tcgggttgtt
     1141 ttgtcataaa aatgtaacag ttgctgttta atctttttaa ttacaagact aagactaatt
     1201 ccataaggag aataattcat gtttgaaggt agactgaccc cgattctagg ggcaggcctg
     1261 atgggctgga ccgcgctggc ctccctgccc gtgaaggcag cgaacgaggc gatgatggaa
     1321 ctgcttaagg tgttgcgcga gaacggcacc ctcagcgaag agacctatga acagctgcaa
     1381 agcgcggcca aggccgatga tgaatccaat acccaaggcc aggccgaggt caaatcagcc
     1441 gcgcagaacc tacccaagat cgagaccaaa gggaagctcg agtggtcgac tccggaaggc
     1501 gatttcaagt ggcgcctcgg tgggcgtatc cacgcggata cggccttcta cgacaacgac
     1561 acgagcacta ccggggagcc caccggtctc gacgacggtg ttgactttcg gcgcgcccgg
     1621 ctggtcaccg aagccaccct gtggcggaac tggcagctta agttcgagta cgattttgcc
     1681 gatgatggcg gagtcgactc aggcctgcgg gatgcttatc tccgctatct cttctggggt
     1741 tcccagccct atatcacggt gggccagttc aaggaatact ttagcctgga gagctggagc
     1801 agctccaacg acatcacctt catcgagcgg gccctgccca gtcgggcctt cagccctccg
     1861 gatgcgcgtc ggctcggggt gggggtgagc acctacggcc aggatctctg gacgctctca
     1921 gcgggcgtct atggcaagaa cgcctcgggc gaagatattg ggggcgtgga gatagaggac
     1981 gaccccgatc ccctggtctt tgtcggccgc ctcacgtttt cgcccctcca tacggaaacg
     2041 cgcgttgtgc acctgggcgt ttcaggctcc tggcttgact cgggcaacaa ccttgtggag
     2101 ttccgcgagc ggcctgaggc ggctattggt gccgagcggc tgattgacac cggcgagttt
     2161 gatgtcgata cgttaacccg ctacggggtg gaggctctcg ccatctacgg ccccttctct
     2221 gtgcagggcg agtatctcct cgcccatgtc gaccgggatc tgcccggcga gcctgacgtg
     2281 agcttccccg gctggtacgt gtacggaagc tggatcctga cgggtgaatc gcggacgtat
     2341 gatttcgtgg aaagcaggtt taagaatccc aagcccaagg gcatcgtcgg caagggcggc
     2401 atcggcgcct gggagatcgc ggcgcgctac agcaccctgg acctgaacga cgaggacatt
     2461 gatggcggtg aagaagagaa cgtcacggtg ggattgaact ggtaccctac gcccgtcttc
     2521 aagttcatgg ctaactacgt gaaggtcctg gacatcgaag gtggggaatt caacgatgcc
     2581 gagcccgata tcttccagct ccgcgcccaa gcgtactggt agcaagccac cattctcctt
     2641 tttacttata ctcgctgttt aagcctcacc tgcagagtgg ggctttttat ttgcggtcgc
     2701 tcatccctct cctcaagatt aagcagcaat ggccgaaata ataagtaccc gtgcaatagt
     2761 atcccagtat ttcaatgtgc tctctctaaa agcagcctgc atctgatgcc tgagaatata
     2821 tgcacgggta cttagaagca catttaaaaa tttttaagga gattttttat gtttatgata
     2881 aggaaattta tcctggctct ctcccttctg gcaccgactt tggtattcgc tggaaacccg
     2941 gtcgatatca ataccgctga tgccgccgca ctggccgagg tgatcaaagg ggttggaccc
     3001 gccaaagctc aggctattgt cgcctaccga gagaaacatg gcccgtttaa gtcggtgtac
     3061 gatttaacac ttgtcttggg gattggtacc aaaaccattg aaaataaccg ggacaatctg
     3121 accgtagggg tctcagaggc tcctgaagct gccccgagtg cccaataaat ttcaatctta
     3181 atatcgcccc tcccctgtgg ggaggggtct ccctccaaag tgcacctgct atgtcggtac
     3241 aagctcaaac caagacccct actcagcttg tcatctcaaa atgcaaagaa ttggtcgcgc
     3301 ggcaacttgg caccttactt aaagacagtt ttcagcaggc cgatcagcgc ttgttctcat
     3361 gtgctcggga tgccaaaagc aatgccgagc aaagggattt ttttgatgcc agctcagcct
     3421 taaaaaaaga acagccacgc cttgaatcgg agatcattca tgccacgctg gcgtaaatgg
     3481 atcgggcggc agaaccagcg gatgcaaatg atagggcccc tgtaaaggat gagacctcag
     3541 gattttctct gttagacacc ggggagctgg aaaggctaat tgcggtcgcg cgatgcgtct
     3601 caaaggcaga gacgctccac aagatcctct tgcaccaact cgggcaacgc tttacccatc
     3661 tgctcgcggc agacgtagac aaaaacgctc tccctgcagg accggctgct atctgtgaag
     3721 ccttctccag cgtcctagcc agccttaacc tgaactggtc actgctgaag gagatctatg
     3781 aggtgctgga aaacaggctg atcccgcgtt tgggtgatct gtatgcaaac ctcaatgagc
     3841 tgctgatcca acaggggatc ctgccaaccc tggaacaggg ccgaccgctg ccccggcaaa
     3901 atccacctat tcgccggacc ccgcctggac cgagtatcaa ccagactacc tcacccgagc
     3961 tacaggcacc taggcgatcc gagcagcttg gcgcagagcc ccccgattat ggcccaggga
     4021 ggattgcacg cgatagccac gccggcaata ttacccaggg cgcctatcag gcagctcaaa
     4081 ccttatgggc cttacaacag catatccaag ctagcgcttt caatcagacc gcgggattta
     4141 tacgctcgcc cgacaccctg gaaatgcccc ttatgagccc tccaagcggg acagcatcac
     4201 ccttttatga caccactgag attgcaagtg cgattgacgc gcttgaacct gagccaccga
     4261 gctatcaagc cggcagtccc accattaagg ataggctgct ctcggtattg gccggtcaaa
     4321 atagcggtca gccacaaaag cgcctgggcc agccgcaaag catggctatc gatatggcag
     4381 ccgatctatt agggtcaatc gatcaggatc ccctgctcac taacaccgtg aaatcccaga
     4441 tccggagact tcagtttcct atttgtaagg ttgcgctctc agaacctagt ttcttaagca
     4501 ccggatccca ccccgtgcgt caggtgctga atcaactggc tcagttgcat acaggtccgg
     4561 gaaacacagc aaatctggag cagctcaggc ttgttatcga tcggtcgata gagaagatta
     4621 cccatcgatc cggtcaagac ctgggggtct ttgccgaggt tttagaggaa cttaatcagc
     4681 tggcagccgt aaatgatcgc cagtaccgag agaacgtgga gcgactggtt aaggaatgcg
     4741 agcaacagca agcgtttctc aaggcaagac ggaaggacgc cggaaactcc tcggatccgg
     4801 accggactgt acagcttata tcgcaagacc tctcaccagc catccgtgca gaatggggag
     4861 tctggttaga gcgtgctaaa gaattacagg taggagatac cctcaccctt cacaaaggtc
     4921 tcggcaacgc ccaatgcttg gaattgacgt ggatagggga agatcatcat ccttacgtgt
     4981 ttgccgatcc gcagggcaag aaggcctgtt ccatgagctt acaggcactg gcgatgcaac
     5041 tgcgcagtgg aacaattacc ctaggggatg agagcctctc ggctgtggat cgcgccctg
//
LOCUS       DASQSL010000710         1020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_182966, whole genome shotgun sequence.
ACCESSION   DASQSL010000710 DASQSL010000000
VERSION     DASQSL010000710.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182966"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(58..285)
                     /locus_tag="VE844_07335"
     CDS             complement(58..285)
                     /locus_tag="VE844_07335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01165.1"
                     /translation="MLKLDEVVKLVRVVAETREVEIGCDECFERLDSFAETELSGVDA
                     RAAMPLVGDHLEKCADCRNKFEALLTALRST"
     gene            complement(339..953)
                     /locus_tag="VE844_07340"
     CDS             complement(339..953)
                     /locus_tag="VE844_07340"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HZC01166.1"
                     /translation="MKERTNKQWLMELRGPNPGEALADLYDLLVRGLRAAFGGYGGGI
                     EANFGDFAQEALIRITGNLDSFRGESRFTTWAQKIAMNVALTELKRRRWRDVSLQDLF
                     ARREAADRGPADTQLTPEQLASQNMVLGELRRMVDEELTDRQREAVVAVLLEGMPISE
                     VAKRMGTNQNALYKLLHDARRKLKREMEAAGLSPQEVLATFEEG"
BASE COUNT          190 a          348 c          259 g          223 t
ORIGIN      
        1 ctagcttaag gcggtgacaa gaaatgaggg atggagcatg attttacagc ctgcgctcta
       61 cgtactacgc aaagcagtta gaagcgcctc gaacttgtta cgacagtctg cgcacttctc
      121 aaggtgatcg ccaaccagcg gcatcgcagc tctggcatcc actccggata gctccgtctc
      181 cgcaaagcta tccaaccgct cgaaacactc gtcgcagccg atctctacct cgcgggtctc
      241 ggctacaacc ctcaccagtt tgacgacctc gtcaagcttc agcatcacag aactccagcc
      301 tcgcttctac ctgctagacc caccgtaccc accggatctt acccctcctc aaatgtagcc
      361 agcacttctt gtggcgagag acccgcggcc tccatctccc ttttcagctt tctgcgggcg
      421 tcatgcagta acttgtagag ggcgttctgg ttagtgccca tgcgctttgc cacctccgag
      481 atgggcatcc cctccagtaa caccgccacg accgcctccc gttgcctgtc ggtcagttct
      541 tcgtcgacca tccggcgcaa ctctcccaac accatgttct gggatgccag ctgttcgggg
      601 gtcagctggg tgtctgctgg cccgcggtcg gccgcctcgc gccgggcaaa caggtcctgc
      661 aaggacacgt cgcgccaccg cctgcgcttg agctcggtga gggcgacgtt catggcgatc
      721 ttctgcgccc aggtggtgaa acggctctct cccctgaagg aatccaggtt gcccgttatt
      781 ctgatcagcg cctcctgggc gaagtccccg aagttggcct ctatgccacc gccgtaaccc
      841 ccgaaggctg ccctcagccc gcgcacgagc aggtcatata ggtccgcgag cgcctcgccg
      901 gggttcggtc cccgcaactc catgagccat tgtttgttgg tacgttcttt catataaggc
      961 cgatactatc ccgtttttct acccaccgta gcaccgatcc tgtggagaag caggtacatc
//
LOCUS       DASQSL010000711         1227 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_156563, whole genome shotgun sequence.
ACCESSION   DASQSL010000711 DASQSL010000000
VERSION     DASQSL010000711.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156563"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..795)
                     /locus_tag="VE844_07345"
     rRNA            complement(<1..795)
                     /locus_tag="VE844_07345"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            complement(1050..>1227)
                     /locus_tag="VE844_07350"
     rRNA            complement(1050..>1227)
                     /locus_tag="VE844_07350"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          202 a          408 c          336 g          281 t
ORIGIN      
        1 cccgcttcag cctgcccatg ggtagctcgc tcagtttcgg gtctaccgcc tctgactgga
       61 tcgccctatt cggactcgct ttcgctgcgg ctccgctcat cgcttaacct cgccagggac
      121 gagtaactcg ccggctcgtt atgcaaaaag cacgccgtca cacccgaagg tgctccgacc
      181 gcttgtaggc acgcggtttc aggtactatt tcactcccct tctggggtac ttttcacctt
      241 tccctcacgg tactagttca ctatcggtca ccaggtagta cttagccttg cagggtggtc
      301 cccgcgggtt cagaccgcgt ttcacggcag cggtcctact caggtactcg atcgacaggt
      361 cagtgctctt tcacctacgg gacgattgcc ctctgtggtg cgaggttcca ctcgacttcg
      421 gctaaagcct gacttggtaa ctgtcgccgg atcggacacg atccggacac gagccctaca
      481 acccccggca tgcaacgcgt gtccgcttac acatgccagg tttaggctgt tcccctttcg
      541 ctcgccacta ctcggggagt ctcggttgat ttcctttcct cgaggtactg agatgtttca
      601 gttccctcgc ttgcccccgc tgcgcctatg tattcagcgc agggtgacac cgcattaccg
      661 gtgccgggtt tccccattcg ggaatccgcg ggtcaaaggc tgttcagcac ctcaccgcgg
      721 cttatcgcag ccgtccacgc ccttcttcga ctcctgatgc caaggcatcc accgtgtgcc
      781 cttactatct tgacggtgat cgttgatgtg gccggcgcac cgcgagcggc cgccggcatc
      841 aacggtgatc ttccgttgtt tggccaactg tgcagttttc aaggtccggc gagggcgcaa
      901 ccggggggac ttcccggctg gtctctcaaa actcagcagt gcaaggccag gcgccgaagc
      961 acccgggcct ccaggtccgg tcgacgtttc gggacgtccg ccggccatga ggccgaaacg
     1021 gacgggctca tccgtgatga gctccctaga aaggaggtga tccagccgca ccttccggta
     1081 cggctacctt gttacgactt caccccaatc gctgacccca ccttcgacgg ctgcctccca
     1141 atagggttag cccaccggct tcgggtgttg ccaactttcg tggtgtgacg ggcggtgtgt
     1201 acaaggcccg ggaacgtatt caccccg
//
LOCUS       DASQSL010000712         1653 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_74104, whole genome shotgun sequence.
ACCESSION   DASQSL010000712 DASQSL010000000
VERSION     DASQSL010000712.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74104"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(266..1567)
                     /locus_tag="VE844_07355"
     CDS             complement(266..1567)
                     /locus_tag="VE844_07355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019140423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HZC01167.1"
                     /translation="MTLWFLIIGALLILMALIGSVLKRLPLSTGVIYLLIGFALGPEG
                     LALIQLEPLASSQLLKLIAEVAVLVSLFSVGLKLRVHPYDRTWHLPVRLAVIAMLATI
                     ALLALVGAIALDLPLGAAILLGAILAPTDPVLASDVQVQNPGERDRVRFSLTGEGGLN
                     DGIAFPFVMLGLGLLGLHDLGPYGVRWLAVDVVWAIAAGLGSGWLCGFLVGRLVIHLR
                     REYSEALGLEEFLALGLIAFAYGFALLIQSYGFLAVFAAGLALRRIEHVTSGVKPIEI
                     IVEVANPEAEREVATHPDKAPVYMTQALLSFNSQLERIVEVGVVLLLGSLLSARYWAF
                     DALWFAPLLFLVIRPVSVALGLIGSPTPKSHRRLIAWFGIRGIGSLYYLMYAIQQRLA
                     PELAEYLASLVLTVVAASIIVHGISATPLMEHYYYRRKVNS"
BASE COUNT          411 a          494 c          452 g          296 t
ORIGIN      
        1 gtccggttaa ttactagacc tattgcaaaa atacactatt ccctccccct cgatagagga
       61 agggtgaagg aggggatgaa tgaatcaagg tcttcccctt catccctcct ctcccacaga
      121 ggggagagag agttttgcaa gagatctaat ttttagcgtg ctcgtacaaa ctaaaaaacc
      181 tattatttgc tcactcaacg ccttatcctt gtttgtaagc gggcggggct cctctgggcg
      241 tttgcccgga acggggtgct tatcctcagc tattcacctt acgccggtaa taataatgct
      301 ccatcagcgg cgtcgccgag ataccgtgca cgatgatcga cgcggcgacg acagtgagca
      361 ccagggaagc gagatattcc gctagttcag gcgcaagcct ttgctgtatg gcatacatca
      421 gataatatag cgaaccaatg ccgcggatgc cgaaccaagc tatcaaccgg cggtgcgatt
      481 tgggcgtagg cgatccgatc agccccagcg ctactgaaac cggccggatc accagaaaca
      541 agagcggcgc gaaccaaagc gcgtcgaatg cccaatagcg ggccgataac aaactgccca
      601 ggagcagtac gacccctacc tcgacgatac gttctagctg tgagttgaag ctgagcagcg
      661 cctgcgtcat gtagacgggc gccttgtccg ggtgagtggc gacctcccgt tccgcctcgg
      721 ggttcgccac ctcgacgatg atctcgatag gctttacgcc gcttgtaaca tgttcgatcc
      781 ggcgcagagc gagacccgcc gcgaacacgg caagaaagcc gtagctctga atcaaaaggg
      841 cgaagccgta agcgaacgcg atcagcccca gcgccagaaa ctcttctaac cccaacgctt
      901 cgctgtattc gcggcgcaga tgaatcacca agcggccgac cagaaaaccg cacagccagc
      961 cgctgccaag accggctgcg atggcccaga cgacgtcgac ggcaagccaa cgtacgccgt
     1021 aggggcccag atcatgcaga cctagaagcc ccagcccgag catgacgaag ggaaaggcga
     1081 tgccatcgtt caggccgccc tcgccggtca gactgaagcg cacgcgatcc cgctcgccgg
     1141 ggttctgcac ctgaacatcg gatgccaaca ctggatcggt cggcgccaat atcgcaccca
     1201 ggagaatagc ggctcccagc ggcaggtcca gtgcgatggc gcccactagg gcgagcagcg
     1261 cgatcgtcgc caacatagcg atgacagcca gccttactgg cagatgccag gtcctatcgt
     1321 aaggatgcac gcgtagcttg agcccgacgc tgaagagtga gacgagcacg gcgacttcag
     1381 caatcagctt gagaagctgc gagctcgcca ggggctcgag ctggattagc gccaagccct
     1441 caggtcctag cgcaaatccg atcaacaaat aaataacacc cgtgctcaat ggcaggcgtt
     1501 tgagcaccga tccaatgagc gccatcagaa tcaatagcgc cccgatgatc aaaaaccata
     1561 aagtcatccg tctggctcca taaaaattgg ccctgcacgc taacccgcgg catttttcgg
     1621 ggtacgtttc actcctcggt aggtaatagg agt
//
LOCUS       DASQSL010000713         1255 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_156602, whole genome shotgun sequence.
ACCESSION   DASQSL010000713 DASQSL010000000
VERSION     DASQSL010000713.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1255
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156602"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(242..547)
                     /locus_tag="VE844_07360"
     CDS             complement(242..547)
                     /locus_tag="VE844_07360"
                     /inference="COORDINATES: protein motif:HMM:NF024806.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZC01168.1"
                     /translation="MDTLIQHLNTRPGDPQDQALHRLADTLAKEPNNIKALFELGTAY
                     ERRGMYEQAILEYRKALKVDADFVEAIEHLAFLLEKLNRDHEASPLWERILSLKKHV"
     gene            complement(801..>1255)
                     /locus_tag="VE844_07365"
     CDS             complement(801..>1255)
                     /locus_tag="VE844_07365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01169.1"
                     /translation="DASLIGWHIGAETMVIPCAFYGFVNRTTKVTLQVDQAQLEVGRA
                     ITYEGDSYVIHSVFEADGHYRANVGLAHLHPTRSASRLKTVPPHPPALEGKAPQDSRR
                     DTRESALQTSLQTAEAKLQDLLRERDEVLKRIEDAIQQLDRIHQHART"
BASE COUNT          206 a          358 c          399 g          292 t
ORIGIN      
        1 ttgggtgcag gtccccagcc cgtctaccca ccagtagcca tgcctgggtg agctgagggg
       61 actccgacaa ggcgcgaggt ttcggtcaat acgcccaagg ccaatggtca gcgcatgcgt
      121 ggagcgatgc tggctcgccg cgatgaaccg ctccttctta tacaccacct gcggcatgag
      181 gtcaacggct gaccccggtc ggtgcacgcg ggtgtggggc aatgggcagt gtgtggaggg
      241 gttacacgtg ttttttgagc gacagaatgc gttcccagag gggtgaggcc tcgtggtctc
      301 gattcagctt ctcgagcaag aaggccaggt gctcgatggc ttccacaaaa tccgcatcga
      361 ccttgagtgc cttgcgatac tccagaatgg cttgttcgta catcccccgt cgttcgtacg
      421 cagtccccaa ttcgaagagg gccttgatgt tgttcggctc cttggcaagt gtgtctgcca
      481 gccggtgcag cgcctgatct tggggatcgc ctggacgcgt gttcaggtgc tggatgagcg
      541 tgtccacggg tgggctggtg gtcgggcgct ccgcccgtaa gcgtgtgatc tcgctttcga
      601 gctccgcgat gcgcttctca gcctcctgat gcttgtgctc aagttgcagc ttttcctgtt
      661 tgagttgtga gaccagctat gctgtcaggc gaatcttctc ctcgagctcc tgaaacttct
      721 ctggaaacat gggtacgtgg cccctccgcc aaagggttgc cctgtgagat cacgcgcatc
      781 acgggtgtga cgactctacc ctacgtcctt gcgtgctgat gaatgcggtc gagctgctgg
      841 atggcatcct cgatccgctt gagaacctca tcgcgctccc gcagcaagtc ctggagtttg
      901 gcttcggctg tctgcaggga ggtctgcaag gcagactccc gcgtgtccct tctgctatct
      961 tgcggagctt taccctccaa tgcggggggg tgaggtggga cggttttcag gcgcgaagcg
     1021 gagcgtgtgg ggtggaggtg cgccaggccg acgttggctc ggtagtgccc gtcggcctcg
     1081 aacaccgaat gaatcacata gctatcgcct tcataagtga tcgcccgccc cacctcgagt
     1141 tgggcttggt ccacctgcag ggttactttg gtcgttcggt tgacgaagcc gtagaacgcg
     1201 cacgggatga ccatggtctc agccccgata tgccagccga tgaggctcgc gtctt
//
LOCUS       DASQSL010000714         1372 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_5964, whole genome shotgun sequence.
ACCESSION   DASQSL010000714 DASQSL010000000
VERSION     DASQSL010000714.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1372)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1372)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1372
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5964"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            164..778
                     /locus_tag="VE844_07370"
     CDS             164..778
                     /locus_tag="VE844_07370"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HZC01170.1"
                     /translation="MIERTNEQWLAELREPNPDEALADLYNLLVRGLRLGLGNYGGSV
                     DANAEDFAQEALIKITGNLDSFRGESRFTTWAQKIAMNVALTELKRRRWRDVSLQDLF
                     ARREGSDRGPADPHLTSEQLALQNTVLGELRRMIDEELTDRQREAVVAVILEEMPISE
                     VARRMGTNQNALYKLLHDARRKLKRQMEAAGLSANEVLAVFDEG"
     gene            831..1058
                     /locus_tag="VE844_07375"
     CDS             831..1058
                     /locus_tag="VE844_07375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01171.1"
                     /translation="MLKRDDVVKLVRVVAETREIEIGCDECFEQLDSFVEAELSGVEA
                     SGAMSLVRDHLDKCADCRSTFEALLRTLRST"
BASE COUNT          294 a          371 c          430 g          277 t
ORIGIN      
        1 gggtccttac tggccctcgt ctataagacc actcaaggac ccgatttctt accccctcgc
       61 accacgtgtg tcgtcccaac cagttctgct ccaccgatgt acctgctctt ccgcgtgatc
      121 ggtgctacgg tgggtagaga aagcgggaga gcatgggcct tacgtgatag aacgcacaaa
      181 cgaacaatgg ctcgcagagt tgcgggaacc gaaccccgat gaggcgcttg cggatctata
      241 caacttgctc gtacgcgggt taagactagg cctgggaaac tatgggggta gcgtagacgc
      301 caacgccgag gactttgccc aggaggcgct gatcaagata acgggcaacc tggactcctt
      361 taggggagag agtcgtttca ccacctgggc gcagaagatt gccatgaatg tcgccctcac
      421 cgaactcaag cgcaggcggt ggcgcgacgt gtcgctgcag gacctgttcg ccaggcgtga
      481 ggggtcagac cgcgggccag ccgaccctca tctaacctcc gaacagctgg cgttgcagaa
      541 cacggtactg ggagagttgc gccgcatgat cgacgaagaa ctgacagata ggcagcgaga
      601 ggcggtggtg gcggtgatac tggaggagat gcccatctcg gaggtcgcca ggcgcatggg
      661 caccaaccag aacgctctct acaagctgct gcacgatgct cgcagaaaac tgaagaggca
      721 gatggaggcc gcgggcctct cggcaaatga agtgctggcg gtgttcgacg aagggtaaga
      781 tccgaagggt atagcgagtc tagcggttag aagtgaagag gagttttgcg atgctgaagc
      841 gcgatgatgt cgtcaaactg gtgagggtcg tagccgagac gcgcgaaatc gagatcggtt
      901 gcgacgagtg cttcgagcag ttagatagtt ttgtggaggc ggagctttcc ggagtggagg
      961 cgagtggtgc gatgtcgctg gttcgcgatc acctcgacaa gtgcgcggac tgtcgtagca
     1021 cgtttgaggc gcttctaaga accttacgca gtacgtagag cgcaggctgt ggagccgtta
     1081 ctcaatcccc gatctatcgt cgccacctta agcttgacct ctactgcaat gacgctgtgc
     1141 cctcgtcctg ctcgctcact accgtgggcg gtactggatc gacctgaggg gtataagata
     1201 cttccaggcc gaggactccg ctgggtagtg cgcggagcct cgcattccaa tatgacactc
     1261 aagggcatgt tgaccaacgc ctcttggagt acggcgctcg tcagcgtatc ctctctgttc
     1321 atcgttcacc ccgttgcctc tatggacgct cctcattggg ctgcagcacc tc
//
LOCUS       DASQSL010000715         1012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_5971, whole genome shotgun sequence.
ACCESSION   DASQSL010000715 DASQSL010000000
VERSION     DASQSL010000715.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5971"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(111..>1012)
                     /locus_tag="VE844_07380"
     CDS             complement(111..>1012)
                     /locus_tag="VE844_07380"
                     /inference="COORDINATES: protein motif:HMM:NF021926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FIST C-terminal domain-containing protein"
                     /protein_id="HZC01172.1"
                     /translation="DSRAVGQRVAQDLLPHLSLATIGLFVFPDGMSVALDSFFAANFD
                     NFFAGLEENLPSDRFLPLWGGGAGNDFNVKVPTYQYCDDEVVSDGVSYVLLSGKAQAG
                     WAMSHTCIPIGGARTVTRGEGNIIYEIDGKPAAEVLKEYLPEDALAEDLDWVPYSVSL
                     ALCFRAPSYVKDEEYVIRGIPAVKMADGSITVQTEVKEGTSVWFSSRDKQKVATGLDR
                     MAAQIKHQLGGEKPKLVFQFDCATRGKMMFREHEKLELLKRFRHSVGPEVPWAGFYAF
                     GEIGPVEEHNNRNLYTSVVLALS"
BASE COUNT          221 a          304 c          278 g          209 t
ORIGIN      
        1 acagacaagt cggagccgta gaacgaacgg tgaagagggc gaggccacct acctgttcgg
       61 ggtaagcttc tccttcgtca aacgctacgc caggatggtc tcttcgatag tcaactcagg
      121 gcaaggacga ccgacgtgta tagattacgg ttgttgtgct cctctaccgg accgatctcc
      181 ccgaaagcat agaaacccgc ccatggcacc tccgggccaa cagaatggcg aaaccgcttg
      241 aggagctcga gcttctcgtg ctcgcggaac atcatcttgc ctcgagtggc acagtcgaac
      301 tggaacacga gtttgggttt ctcaccacca agttggtgct tgatctgagc ggccatccga
      361 tcgagcccgg tagcgacttt ctgcttgtct cggctcgaga accagacact cgtgccctcc
      421 ttgacctccg tttgtacggt gatcgatccg tcggccatct tcactgcagg tatgcctcgg
      481 atgacgtact cttcgtcctt cacgtagctg ggagccctga aacaaagcgc aagcgatacg
      541 gagtaaggca cccagtccaa atcctcagcg agggcatcct ccggcagata ctccttgagc
      601 acttctgcgg cgggtttacc gtctatctcg tagatgatgt ttccctcgcc ccgcgtcacc
      661 gtacgcgcgc cccctatagg gatacaggtg tggctcatgg cccaaccagc ctgtgcctta
      721 cctgagagca gcacgtagga aactccgtcg gagactactt cgtcgtcgca atactggtag
      781 gttggtacct tcacattgaa gtcgttgcct gctcccccac cccacagtgg gaggaatcgg
      841 tcgctcggga ggttttcctc cagccctgca aagaagttat cgaagttcgc agcaaagaag
      901 ctatccaagg ccactgacat accatccggg aagacgaaca ggccgatggt agcaagagac
      961 aggtgaggca gcaggtcctg ggcgacccgc tgcccaacag cgcgtgagtc gg
//
LOCUS       DASQSL010000716         1371 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_19817, whole genome shotgun sequence.
ACCESSION   DASQSL010000716 DASQSL010000000
VERSION     DASQSL010000716.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1371
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19817"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1371)
                     /locus_tag="VE844_07385"
     CDS             complement(<1..>1371)
                     /locus_tag="VE844_07385"
                     /inference="COORDINATES: protein motif:HMM:NF013235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="HZC01173.1"
                     /translation="AKREVIKHSAAIQIENNITLLQRRTWNALLYNAYDELETKEEHA
                     IPVKKLAGLVGYDSHDMGYLKEAALAMLRCIVQYNVLGKDGSSERWGAMALLAQVDIQ
                     KGLFSYAYSPELRRRLHNPAMYARLDLNMQKQFASKHALALWELCADYLGSGRDYGES
                     PVIPLAEYRKLMGIADDMYPLFKLFNKRVIKEPIEEINRVSDFLVSVNYRRSGRKVKA
                     LKFKIRRITILPGAVAGQGKLFPAEDMPLVVRLLKDVGLSSSDAWDIYQRGWAFVVDD
                     VIRPVDPGGDAEVAFVRYIREKIHLLKRRQASGKVDNSTGFLLEAIRQNYANPEYTAE
                     KQREADRKNQQARREREKQAKALAQQKADLEQARDKELDQLSSRVAAELPCILEQAAA
                     ELLAESFGFRQFYDRDKSALENYQARKAVQMLLNPFLERHAPARFEGVKRNYALRIAA
                     IDVQIAA"
BASE COUNT          265 a          399 c          381 g          326 t
ORIGIN      
        1 gcggcaatct gtacgtcgat ggcggcgatc cgcagcgcgt agtttcgttt gacgccctca
       61 aaacgcgcag gcgcgtgccg ttccaggaag gggttaagca acatttgcac ggccttccgg
      121 gcctggtagt tttccagcgc cgacttgtcc cggtcgtaga attgccggaa cccaaaactc
      181 tcggctagca gttcagcggc tgcctgctcg agaatgcagg gcaattctgc cgccacccgg
      241 ctggacaatt ggtccagctc tttgtcacgg gcttgttcca gatcggcttt ttgctgggcg
      301 agagcctttg cctgtttctc ccgttcacgc ctggcctgtt ggttcttcct gtcggcctcg
      361 cgctgttttt ccgccgtata ctcaggattg gcgtagttct ggcggatggc ttccagcaga
      421 aatcccgtgc tgttatccac cttgcctgag gcctggcgcc tcttgagcaa gtgaattttc
      481 tcacggatgt accggacaaa agccacttct gcatccccgc cgggatctac aggccggatc
      541 acgtcatcca ccacgaaggc ccagccgcgt tggtagatat cccatgcgtc acttgaggac
      601 aagcccacat ccttgagcag cctcacgacg aggggcatgt cctcagcggg gaaaagcttc
      661 ccttgcccgg cgacggctcc agggagtatg gtgatgcggc ggattttgaa cttcagggcc
      721 ttgaccttcc gcccgctccg ccgataattg acggagacga ggaaatcgga gacacggtta
      781 atttcctcga tgggttcttt gatgacgcgc ttattgaaga gcttgaacag agggtacatg
      841 tcatctgcaa tgcccatcag cttccggtat tcggcaagcg gaataactgg gctctcccca
      901 tagtcgcggc ccgaccccag ataatcggcg cacagttccc acagggccag agcgtgttta
      961 ctggcgaatt gcttttgcat gttgagatca aggcgggcat acatggccgg attatgcaga
     1021 cgccggcgta actccgggct ataggcgtag ctgaacaagc ccttctgaat atcgacctgg
     1081 gcaagaagcg ccatcgcccc ccatcgttcg gagctgccgt ccttgccaag gacgttgtat
     1141 tgcacaatac aacgcagcat ggccaaagcc gcttctttca gataacccat gtcatggctg
     1201 tcgtagccga cgaggccagc aagtttcttt acagggatcg catgctcttc cttggtttcc
     1261 agttcatcat aggcattgta cagaagcgca ttccacgtgc ggcgctgaag cagggtgata
     1321 ttgttctcta tttggatcgc cgcgctgtgc ttgatgactt cccgcttggc c
//
LOCUS       DASQSL010000717         2900 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_46699, whole genome shotgun sequence.
ACCESSION   DASQSL010000717 DASQSL010000000
VERSION     DASQSL010000717.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2900
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46699"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1510)
                     /gene="pgi"
                     /locus_tag="VE844_07390"
     CDS             complement(<1..1510)
                     /gene="pgi"
                     /locus_tag="VE844_07390"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014266227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HZC01174.1"
                     /translation="MAAGVQPVTKRPAIKRKVWNALESHYKKVSKLHLRQLFADDPER
                     GERLAVEAIGLYLDYSKNRITDETLKLLLQLAERSGLQTRIDAMFRGEKINVTEGRAV
                     LHVALRAPRGASIVVDGKDVVPKVHSVLDKMADFSDRVRSGAWKGHTGKRIRNVVNIG
                     IGGSDLGPVMAYEALKHYSERAMTFRFVSNIDGTDFAEAVRDLDPSETLFIVSSKTFT
                     TLETMTNAHTARAWSLAGLGGDEKSVTKHFVAVSTNAAEVAKFGIDPANMFEFWDWVG
                     GRYSMDSAIGLSTMVAIGPDNFRAMLDGFHQMDEHFRTTPFERNLPVLMGLLAVWYNN
                     FFGAQTVAVLPYEQYLKRFPAYLQQLTMESNGKQVTLDGKDVSHPTGPIYWGEPGTNG
                     QHSFYQLIHQGTRLIPCDFIAFAKSLNPLDRHHDMLLANVFAQTEALAFGKTPDEVRG
                     EGTPEWLVPHRTFAGNRPTSTILADRLTPETLGKLVALYEHSVFTQGVIWDID"
     gene            complement(1551..2654)
                     /gene="tal"
                     /locus_tag="VE844_07395"
     CDS             complement(1551..2654)
                     /gene="tal"
                     /locus_tag="VE844_07395"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011687488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HZC01175.1"
                     /translation="MKATQLLHNLGQSLWLDNITRGLLDSGTLKQYIDELSVTGLTSN
                     PTIFDHAIKNSAAYDAAITEKSGQGKSGEALFFELALEDLTRAADLFQPIHEKTNGVD
                     GWVSLEVSPLLAHDTASTIAAAKDLFARAARPNLLIKIPGTWEGLPAIEEAVFAGVPV
                     NVTLLFSHEHYLAAAEAFLRGIERRIAAGLNPNVGSVASVFISRWDAAVASKVPDKLR
                     NQLGIAIAKRTYKAARTFFGSPRWQRVYNFGARPQRLLWASTGTKDPKASDILYIKAL
                     AAPFTVNTMPEGTLKALAAHAELGELLPADGGNCEEVLAQFAKAGVDVDALAAQLQDE
                     GANSFVKSWNELMAVISSKSASLDKSAGVKAAG"
BASE COUNT          604 a          861 c          805 g          630 t
ORIGIN      
        1 agtcgatgtc ccagatgacc ccctgggtga agacgctgtg ctcgtagagc gccaccagct
       61 tgccgagcgt ctccggtgtc agccggtcgg ccaggatcgt gctcgtcggg cggttgcccg
      121 cgaaggtgcg gtgcggcacg agccactccg gcgtgccctc gccgcgcacc tcgtcgggcg
      181 tcttgccgaa cgccagcgcc tcggtctgag caaagacatt tgccagaagc atgtcatggt
      241 gccggtcaag cggattcagc gacttggcga aggcgatgaa gtcgcaaggg atgagcctgg
      301 tcccttgatg gatcaactgg tagaacgagt gctgcccatt agttcccggc tcgccccagt
      361 agataggacc ggttgggtgg ctcacatcct tcccatccag cgtgacctgc ttgccgttgc
      421 tctccatcgt taactgctgc agatatgccg ggaaccgctt caagtactgc tcataaggca
      481 agacggcaac agtttgagcg ccgaaaaaat tgttgtacca aacggccagg aggcccatga
      541 gcaccggcag gttacgttcg aaaggcgtcg tgcgaaaatg ttcatccatc tggtggaagc
      601 cgtccaacat cgcgcggaag ttatccgggc caatggcgac catcgtcgaa aggccgatcg
      661 ccgaatccat cgaatagcgc ccgcctaccc aatcccagaa ctcaaacata ttggcgggat
      721 cgatgccgaa cttcgccact tccgccgcat tcgtcgaaac ggcgacaaaa tgcttcgtga
      781 ccgacttttc atcgcctccc aggccagcga gcgaccaggc acgagccgtg tgagcgttgg
      841 tcattgtttc caacgtcgtg aaagtcttgg aagaaacgat gaagagggtt tccgacgggt
      901 cgagatcacg cacagcttca gcgaaatcgg tgccatcgat gttcgaaacg aaccggaatg
      961 tcatggcccg ctcgctgtag tgcttgagtg cctcgtaggc catgaccggc ccgagatcgg
     1021 agccgccaat cccgatgttg acgacgttgc gaatgcgttt tccggtgtga cctttccagg
     1081 caccgctccg gacgcggtct gagaaatcag ccatcttgtc gagcacagag tggaccttcg
     1141 gcaccacatc ttttccgtcg acaactatgg acgctcctcg cggagcacgt agcgccacat
     1201 gcaaaaccgc tcggccctct gtgacgttaa tcttctcccc gcgaaacata gcgtcgattc
     1261 gcgtttgcag gccggatctc tccgcaagtt gaagaagcag cttgagagtc tcgtcggtaa
     1321 tgcgattctt ggagtagtcc aggtagagac cgatagcctc gaccgccaga cgctcgccgc
     1381 gctccggatc gtccgcaaag agctgtcgca gatgcagctt tgacaccttt ttgtagtgcg
     1441 actcgagtgc attccacact ttgcgtttga tcgctggtct tttcgtgact ggttgtacgc
     1501 ccgctgccat gctcatgctc ctttcttctc cacgtgctta ctctcctgct tcaaccggca
     1561 gctttcacac cggcgctctt gtcaagcgag gcactcttgg aagaaatcac cgccatcagc
     1621 tcgttccacg acttcacaaa cgagttggct ccttcatcct gaagctgcgc agccaaggca
     1681 tcgacgtcga cgcctgcctt ggcaaactgt gctaacactt cttcacagtt accaccgtcc
     1741 gccggcaaca actcgcctaa ttcggcgtga gcagcaaggg ccttcaatgt gccctcaggc
     1801 atggtgttca cggtgaaagg tgcagccagg gccttgatgt aaagaatgtc tgaggccttg
     1861 gggtccttgg ttcccgtgct agcccataac agccgttgcg gacgagcgcc aaagttgtag
     1921 acgcgctgcc agcgcggcga gccaaaaaaa gtacgggccg ccttgtaggt acgtttggcg
     1981 atggcgatgc caagttggtt gcgtagcttg tcaggcacct tgctcgcaac ggcggcgtcc
     2041 cagcggctga tgaacaccga tgctacggag ccgacattgg ggttgagccc tgcagcgatg
     2101 cgccgctcga tgccgcggag gaaggcctcg gccgccgcca ggtaatgctc gtgggagaac
     2161 aagagggtga cgttgacagg cacaccagca aagactgcct cctcgatagc gggaagacct
     2221 tcccaagtgc cagggatctt gattaacaga ttgggacgcg ccgcccgcgc aaacaaatcc
     2281 ttcgctgcgg caatagtgct ggctgtgtcg tgcgccagaa ggggcgacac ttccaacgat
     2341 acccatccgt ccaccccatt cgtcttttcg tgaatcggtt gaaagaggtc cgccgcccgg
     2401 gtgaggtctt ccagcgccag ttcgaagaag agcgcctcac ccgatttgcc ttgccctgac
     2461 ttttcagtga tcgccgcgtc ataggccgcg ctgttcttga tggcgtggtc gaagatcgtc
     2521 ggattcgaag tgagtcccgt caccgacagc tcgtcgatgt attgcttgag cgtaccgcta
     2581 tccagcaggc cgcgcgtgat gttgtccagc cagagactct ggcccaagtt gtgaagcagt
     2641 tgtgtcgctt tcattgaatc acctcagtta ccaaatcttc aggcgaagac ttcaaaatga
     2701 tttcaagctt ttgatctgac aaaagttcct ttttgatggc atcgtacaac cgcacggacc
     2761 tgatcatcag tgagacgagg tctggccaca tttctcattg actgcgggaa caatagcgcc
     2821 ttcatcgtca caccctcttt tctgttgact gcatgacctc ttcaacaatg cacttgttta
     2881 gacaccctga ggccaccaac
//
LOCUS       DASQSL010000718         1328 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_5989, whole genome shotgun sequence.
ACCESSION   DASQSL010000718 DASQSL010000000
VERSION     DASQSL010000718.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1328
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5989"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..563)
                     /locus_tag="VE844_07400"
     CDS             complement(<1..563)
                     /locus_tag="VE844_07400"
                     /inference="COORDINATES: protein motif:HMM:NF014458.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HZC01176.1"
                     /translation="MLDPSQLRNQLHEVANALKPRGLELDIERLTKLEDKRKRLQVET
                     ETLQRQRNTKSRAIGEAKQRGEDVQTLMAEVAYLGDKMRQAEARFNEVQTGIEIFSLM
                     IPNIPHASVPLGRSEADNLEVRRWGTPPHFNFKPKDHVDLGISLSAMDFEAAVRIASA
                     RFVILSGPLARLQRALIQFMLDLHTEE"
     gene            complement(665..>1328)
                     /locus_tag="VE844_07405"
     CDS             complement(665..>1328)
                     /locus_tag="VE844_07405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_251303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="recombination factor protein RarA"
                     /protein_id="HZC01177.1"
                     /translation="DLAADGILDEALLEAVWSGGTLRRFDKAGEHFYDQISALHKSVR
                     GSAPDAALYWYARMLDGGCDPLYIARRVVRIASEDIGNADPRALRIALDAWEAQQRLG
                     SPEGELTLAQAIVYLACAPKSNAVCRAFNAALEDARALGSLEVPLHLRNAPTRLLQAL
                     NYGKGYRYAHDEPEAYAAGECYFPQELKGRRYYYPVARGLEIRIAEKLEYLQSLDKKA
                     AR"
BASE COUNT          289 a          390 c          358 g          291 t
ORIGIN      
        1 tgctcctcgg tatggagatc gagcatgaac tggatgagtg cgcgctgtaa ccgcgcaagc
       61 ggccctgaga ggatcacaaa acgcgcactc gcgatccgca cagcggcctc aaagtccata
      121 gcactcaagc taatcccgag atccacgtga tccttgggtt tgaagttgaa gtgcggaggc
      181 gtcccccagc gccggacttc gaggttatcc gcctcactgc gtcctaaggg gacggaagca
      241 tgggggatat tcgggatcat caggctaaag atctcgatcc ctgtctgcac ctcattgaag
      301 cgagcctcag cttgccgcat cttatctcca agataagcaa cctccgccat caaggtctga
      361 acatcctcgc cccgctgctt ggcctcgcca attgcccggg atttggtgtt gcgctggcgc
      421 tgcagcgttt ccgtctcgac ctgaagacgc ttgcgcttgt cttccagttt agtaagccgc
      481 tctatgtcga gttcaagccc gcggggtttg agcgcattgg ctacctcgtg aagctgatta
      541 cgtagctgag atggatcgag catatctttt tatcctttca aacccttaaa tctcacccga
      601 gagctgggct cacatgagat ataattattt agtctacttc ctacacggat agaaagtata
      661 cggatcatcg agccgccttt ttatccaagg attgtagata ttcaagcttc tccgcgatcc
      721 tgatctccag tccccgggcg accggataat aataacgccg gccctttaat tcttgaggaa
      781 agtaacactc gccggcggca taggcctcgg gttcgtcatg ggcatagcgg tagcccttgc
      841 cgtaattgag cgcttggagc aaacgcgtcg gcgcgttgcg cagatgcagg ggcacttcca
      901 gcgagcccag agcacgcgca tcttcgagtg ccgcattgaa ggcccggcaa accgcattgc
      961 tttttggggc acaagcgaga taaacaatcg cctgggcaag ggtgagttca ccttcggggc
     1021 tgccgagacg ctgttgcgcc tcccaggcat ccaaagcgat cctcaaagcg cgtggatcgg
     1081 cattgccgat gtcttctgag gcgatacgga ctacccgccg ggcgatataa agcggatcac
     1141 agccgccatc caacatccgc gcgtaccagt acagcgccgc atccggtgct gatccgcgaa
     1201 ccgacttgtg cagggccgag atctgatcat aaaagtgctc gcccgcttta tcgaacctgc
     1261 gcaaggtccc accgctccat actgcctcga gcaaggcttc atcaagtatg ccatcggcgg
     1321 cgagatcg
//
LOCUS       DASQSL010000719         1036 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_156649, whole genome shotgun sequence.
ACCESSION   DASQSL010000719 DASQSL010000000
VERSION     DASQSL010000719.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156649"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            218..619
                     /locus_tag="VE844_07410"
     CDS             218..619
                     /locus_tag="VE844_07410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012098140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HZC01178.1"
                     /translation="MKKQIMVAVLASAAWAFVGGTAMGQPVAGSTTIGVTVEEQKALA
                     LGWSAEKHILDKDVYGSNDEKIGEVEDLIITPQKAVSYLIVDVGGFLGMGGHNVAIPA
                     GQVKQEGDKLVLPGATKEALTALPKFEYERQ"
BASE COUNT          245 a          253 c          317 g          221 t
ORIGIN      
        1 tcagtaacgg ttgctcctgc tacgcataac aggctgcttt tcatagactt tacccaaaat
       61 tagcaaaagt cggtaacgac gttgttgaga gggttggttc tcctgatcgt gccccagagc
      121 ggtactatgc tactatggtg cacacgagac agagtcatgt cgtttttgac gtctacctct
      181 taggcaagac gactatccgc agtattaagg aggagcgatg aagaagcaga tcatggtagc
      241 agtgttggca agtgcagcgt gggccttcgt aggtggcaca gccatgggcc agccggtggc
      301 ggggtcgacc accattggcg taaccgtcga ggaacaaaaa gctctcgccc tcggctggag
      361 cgccgagaaa catatcctgg acaaggatgt gtacggcagc aatgacgaga agatcggcga
      421 ggtggaggat ctcatcatca cgccgcaaaa agcggtgtcc tatctgatag tggacgtggg
      481 gggctttcta ggtatgggcg ggcacaacgt ggccattccg gcggggcagg tgaagcagga
      541 gggggacaag ctggtgctgc cgggggcaac caaggaggcg ctgacggcgt tgcccaagtt
      601 tgagtatgag aggcagtaag agcaggagat agtcgcaaat tttcgtgtgt gatggtttga
      661 gatgagttgc cttgtcgagg gtgaatgagg ctgccaggat ggcccgatct cgcaactcat
      721 ccacgctggg ccgattgagc ttggctccct ctcgccgtcg tcgccagaga tgtgtgctcc
      781 tcggcccatg gccaaccaag ctgggccaca atgtgagcgc gcagaatcgg gcgatataat
      841 gacaaatagt ccgtttttct aatggccacg gttcaatact gcctgaaaac ctcgccaata
      901 tcacgttatc atggcaagag gcacgtgaat caatgattag gcgcttcgaa acatcggtaa
      961 cttaggcaca tgtacgagcg ccaaacggaa ccacctcttc cgcggacacg cttcattcgg
     1021 cgggtcctgc tccatt
//
LOCUS       DASQSL010000720         1677 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_74163, whole genome shotgun sequence.
ACCESSION   DASQSL010000720 DASQSL010000000
VERSION     DASQSL010000720.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1677
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74163"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            302..970
                     /locus_tag="VE844_07415"
     CDS             302..970
                     /locus_tag="VE844_07415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017482541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HZC01179.1"
                     /translation="MPTITVEQPKGGVGKTTTTVNLAVELAKAATVIVIEPDPNAPIS
                     NWARQSGVANLTVIQAGKDDSIIDLIEEAERKAVFVIVDTEGIADLRAAQAVSMSDFV
                     IIPSQGSHLDQQGVARAVRLITEQEKIARRSIPFAVLFTRVSAAIRSRGMAEAEKKLA
                     ERGIEAFETRLVEREAFKAMFSFGTTLDGLDPVQVSNIDKAKENARAFAQEVVSRLKS
                     LGGA"
     gene            971..1267
                     /locus_tag="VE844_07420"
     CDS             971..1267
                     /locus_tag="VE844_07420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01180.1"
                     /translation="METRQDPFLEDVSSFEVRKGGRGRLDPKAVEEAAQASGFEDRAP
                     AKKKEKLKPLPFRLPESEVEKFHRQAYEEIGPGYGSLVTYFRKMWKAYEEREGR"
     gene            1418..>1677
                     /locus_tag="VE844_07425"
     CDS             1418..>1677
                     /locus_tag="VE844_07425"
                     /inference="COORDINATES: protein motif:HMM:NF015750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1-like element transposase"
                     /protein_id="HZC01181.1"
                     /translation="MITQVLHCPHCQGIDLVRHGKTPQGKQRYRCRETSCHGGTFLLD
                     YSYPGHSPHIKDQIIAMAMNASGIRDTARVLHVSPTTVIKEL"
BASE COUNT          402 a          442 c          490 g          343 t
ORIGIN      
        1 gtcaagggtg aggcggggcc gggcgctact tcggctgcgg tttccggggg tcgggttccc
       61 gcttgtactt gactagagcc gtggccctaa tctggtgagc cagcaccctt acggcccctc
      121 gcacgcgtgt ctgcgacttt ccacgccgcc cgcctctccg cgatcatgcc ccaacccgga
      181 atcccaagca agaaaaaaat gcaagcattc tatatttcta gaatgatata attctccctt
      241 gcgactatgc gacaatgcag ctattgtaca atgcatgaat gttgctatct agggagaggc
      301 catgccgacc attacagtag agcagccaaa gggaggggta gggaagacaa ctacgaccgt
      361 caaccttgcc gttgaactgg cgaaggccgc tacggtaatc gtcatcgagc ctgacccgaa
      421 cgcgcctata agcaactggg ccaggcaaag cggggtggca aaccttaccg ttattcaggc
      481 cgggaaggat gactcaatca tcgacctgat tgaagaggcg gagcgcaagg ctgtgttcgt
      541 catcgtggac acggaaggaa ttgccgatct gcgggcggcg caagcggtgt ccatgtcgga
      601 tttcgttata attccttctc aagggtccca tctggatcaa cagggggtcg cacgggctgt
      661 cagattgata acggagcagg agaagattgc aaggcgctcc ataccctttg ccgtgctgtt
      721 tacgagggtc agcgcggcca ttcggtcgcg cgggatggcg gaggccgaaa agaagcttgc
      781 cgagcgcggt attgaggctt ttgaaacccg tctggtcgag cgcgaagcgt tcaaggctat
      841 gttcagtttc ggaaccacgc ttgacggtct ggaccctgtc caggtgagca atatcgacaa
      901 agccaaagag aatgccagag cctttgcgca ggaagtcgta agtcgcttaa aatctctcgg
      961 aggagcttaa atggaaacgc gccaggaccc gtttttagaa gatgtttcgt cattcgaagt
     1021 gagaaaggga ggcaggggaa gattggaccc gaaggcggtc gaagaggctg cgcaggcttc
     1081 gggatttgag gatcgcgctc ccgctaaaaa gaaagaaaag cttaagccct taccgttccg
     1141 cctgccggaa tccgaagtcg agaaattcca tcgacaagcc tatgaagaaa tcgggccggg
     1201 atatggttcg cttgttacct atttcagaaa gatgtggaag gcctatgaag agagggaagg
     1261 gcgctgatta caggtgcaat ccatctcccc tgtgaattcc ctctcccctc tgcgtggccc
     1321 tgttaagcac gggcggaggg tgtttcagag ttgtggatct gctatgccat acgggccaag
     1381 gagaagaacg gtaccacccc taggatggcg aggacgtatg attacccaag tgctgcattg
     1441 cccacactgc caaggcatcg atctcgtgcg ccatgggaaa acgccgcaag gcaagcaacg
     1501 ctatcgctgc cgagagacct cgtgccacgg gggcaccttt ctgctggatt attcctatcc
     1561 cggtcactcc ccacacatca aagatcaaat cattgctatg gccatgaatg ccagcgggat
     1621 tcgtgacacc gcccgcgtgt tgcacgtcag cccgaccacg gtcatcaagg aactcaa
//
LOCUS       DASQSL010000721         1762 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_86001, whole genome shotgun sequence.
ACCESSION   DASQSL010000721 DASQSL010000000
VERSION     DASQSL010000721.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1762)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1762)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1762
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86001"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(220..1571)
                     /locus_tag="VE844_07430"
                     /pseudo
     CDS             complement(220..1571)
                     /locus_tag="VE844_07430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006513262.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ISKra4 family transposase"
BASE COUNT          377 a          594 c          455 g          336 t
ORIGIN      
        1 tgtatatagg aatccgataa tgaaacgtgt aggatgatcg cctgaaaacg gaggtgatgt
       61 aagatggatc ggagctgctg catcaaagaa atagacaaat atattgatat gaccgactca
      121 tatctgtata attgtctaca tgaagctgac ctgggatgaa gcgaagcgac aagccacgct
      181 caaagagcgc ggcctggact ttgcgaacgg gcgtatctcc tagttggggg agagcaccat
      241 gtccgggaag aagctatcga atcgttggtt aacccacgcc aatcggagat ggagcagatg
      301 attgaacccc gcttcactcc agcgcatacc tacccctttg aaacgttgtt gaatcagcca
      361 tttacaggca ctttccacta agccactgcc aattggcaag ccggcagctt tgaaatggtc
      421 atagcgaata tgatcttcat gggttttcag gtagctgtaa acgttgatta aggtttgccg
      481 ggcagactgg ggtagatgcg tggcctcgac cagggcagcc aattccgcca gcacgtgctg
      541 ctcatggccg tgccgcagac ggtgccggaa gtcggcaaac cactgctggc aggcgcgggt
      601 gcgcccatcc agccaggcgc tggcgccttt gtacaggttt tgcgcagcat gataaaagtc
      661 taaaatcgcc accgccccga ccgtctggaa gaggcgctga aacacgctcc acaaaccccg
      721 accaccatcc gatagccaca ccacctgcac cgccgtgcgc acctgttggc gcacggcttc
      781 cagccccaac cggggggcca agtcgtcgat cgtgcccaat accgccacta accggcgctg
      841 gcagagccgg gtcacgcgcg ttccttggcg ggtcagccgc gcgcccaggc gagccagaat
      901 cgccaccttg atctcccgcc accgggtttt ccccttcgcc gtgcgggagt gcggtcgaaa
      961 cggtaccatc accccatccg cgcctatcac cagcggcagc gcttccagtt ccgcctctct
     1021 cggctcgacc gcggggagtt cccccgccgc caacgcgcgt aactcgccct cgatctgcac
     1081 catcacctgc tgccccacct gctggaccca ccccagagcg tgcccgccgc tagctctact
     1141 ccggtcaact gccgcagtaa gcggctggcc gtctcatacg gcacaaacac tgccaacaga
     1201 cagcccatcc actgcacttc cgcccccgtg cgttggtgcg ccaccaaccc caacgcctga
     1261 tccaacggtg caacctgcga gcccttgcag cccgtcggac accgtcctac ccgtcgccgc
     1321 cagcggatca ccccaaacaa cgtgtgcagc gttcgcggct ggaagccttt gctctgcagc
     1381 cactgcctac aacgcccgca gacgggccat agctcccgct gctgggcacg cacggttaag
     1441 ctctcttcta tcagccggac cgccaaccgc cgcaccacct cccaagccac cagcaccagc
     1501 agcaccaagc tcgtagcttc ccgcagccgc gctatcggtt cttgaaactg cgcgtcatag
     1561 tcacctaaca tatcgcttaa gcgtgacaag ggggtgtcct cttcttggcc tagtctccaa
     1621 gaagaatatc acctcttgtc atgctcttga gccccctccc caaactctta gatacgcccg
     1681 tcgcgacaag gcgatcctgc ggctgctttt tgaccttgcc ttacgccgtg aggaagtagt
     1741 cagactcgat cttggcgatc tg
//
LOCUS       DASQSL010000722         2487 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_167538, whole genome shotgun sequence.
ACCESSION   DASQSL010000722 DASQSL010000000
VERSION     DASQSL010000722.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2487)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2487)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2487
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167538"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..242)
                     /locus_tag="VE844_07435"
     CDS             complement(<1..242)
                     /locus_tag="VE844_07435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020507969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HZC01182.1"
                     /translation="MSRIFIRLWPVAILCVAIVLSLPLLVISGSLWLPALEVWAHLAS
                     TVLSDYVINSLIVMVGVGIGTFILGVGPAWLTAMCC"
     gene            complement(294..1325)
                     /locus_tag="VE844_07440"
     CDS             complement(294..1325)
                     /locus_tag="VE844_07440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007292976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) ABC transporter substrate-binding
                     protein"
                     /protein_id="HZC01183.1"
                     /translation="MGIIDSCGFIRHLLLLALVTISPALAAAEVNLYSARQEVLIKPL
                     LDRFTAKTGIVVNLVSGEPDALLQRLKSEGKNSPADLFLTVDVGRLLRAQEMGLLQAV
                     DSTVLREAIPAQYRDPGGHWFGISLRARVIVYAKDRIKPEELSTYEALAEPKWKGKLC
                     VRSSSHIYNQSLVAAMIAHLGVERTEIWARGLVGNLARPPEGGDRDQIKAVAAGQCDL
                     AIVNTYYLGGLLNSTDAKEREAAAKVGLFWPDQQGRGVHINISGAGITKAARHRNEAL
                     RLLEFLLSDESQRWYAETNFEYPVKTGVAISDTLQAWGAFIPDKLNLSLLGKHNAEAL
                     RLLDRVGWR"
     gene            1443..2285
                     /locus_tag="VE844_07445"
     CDS             1443..2285
                     /locus_tag="VE844_07445"
                     /inference="COORDINATES: protein motif:HMM:TIGR03709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2 family protein"
                     /protein_id="HZC01184.1"
                     /translation="MKQKNNQPPLVLDHYHVPIDSTFSLGTVEPGDVQDWEKAAARAR
                     LKENLEAMDALQERLYAEGRQALLVVLQAMDAAGKDSTIEAVTHGLNPQGCRVTNFKA
                     PTPPELAHDFLWRVHQHVPAQGMIGIFNRSHYEDVLIGRVKKLAPARLIEKRYGHIND
                     FERLLTDHGTRIVKILLHISPEYQLEQFRERLQDPEKHWNFNPEDLKERVLWKDYMTA
                     YEEVLRRTSTDYAPWFVVPSEHKWFRTMVVSELIRKTLEQMDPEYPKLTFDPADFDLL
                     NTLK"
BASE COUNT          621 a          678 c          663 g          525 t
ORIGIN      
        1 aaacaacaca tggcggtaag ccacgccggt cccactccga ggatgaaggt gccgatccca
       61 acccccacca tcactatcag cgaatttatt acataatcgc tcagcaccgt gctggcaaga
      121 tgagcccata cctcgagtgc aggaagccat aaagaaccac tgatgaccag caggggcagc
      181 gataggacta ttgccacaca gaggatggcg actggccaaa gcctgataaa gatccgggac
      241 atgaaggggg tgcgattaga ttcaaccgag ctttatgcaa tgggcggcag tcattacctc
      301 caacccacgc gatccagcaa ccgcaaggcc tcggcattat gcttaccgag gaggctcaaa
      361 ttaagcttat cagggataaa tgcgccccat gcctgcagtg tatcgctgat cgcgaccccc
      421 gtctttactg ggtactcaaa attcgtttcc gcataccagc gctgggattc atcgctgagc
      481 aggaactcca gcaagcgcaa ggcctcattg cggtgccggg cggcttttgt gatcccagca
      541 ccactgatat tgatatgtac gcctcggcct tgctgatcag gccagaacaa tcccaccttg
      601 gcagcggctt cccgttcttt ggcatccgtg gaattcaata ggccgcctag ataatacgta
      661 ttcacgatcg ccagatcaca ctggccagcc gccactgctt tgatctggtc ccgatccccg
      721 ccttcgggag ggcgagcaag attgccgacc aatccgcgcg cccagatctc ggtccgctct
      781 acaccgaggt gggcgatcat ggctgcgact aaggattgat tgtagatatg gcttgaggag
      841 cgcacgcaga gtttaccttt ccattttggc tcggcgagcg cctcataggt agaaagctcc
      901 tctggtttga tgcgatcctt agcatagacg atgacacgcg cccgcagcga gatcccgaac
      961 caatgacccc cgggatcccg gtactgggcg ggaatggcct cgcgcagcac ggtggaatcc
     1021 acggcttgaa gcagacccat ctcctgggcc cgcaatagac ggccgacatc gacggtcaag
     1081 aacagatcgg cgggggagtt tttcccctca ctttttaagc gctgtaacag ggcatcaggc
     1141 tctccgctta ccaggttgac cacaataccg gtcttggcgg taaaccggtc caacagcggt
     1201 ttgataagca cttcctggcg cgcggagtag agattgactt ccgccgcggc gagcgcgggc
     1261 gagatggtta ccagggcgag caggagcagg tgacgtatga agccgcatga atcgatgatc
     1321 cccatagcct ttatttgtgc taaatgataa taattactaa atgataataa atctgaaaaa
     1381 aataactacc taaggttctg tagagttgca taatccggcg atcggcggca cgatcccgat
     1441 ccatgaagca aaagaataat caacctcccc tagtgttgga tcactaccac gttccaatag
     1501 acagcacgtt ctcgctcggg actgttgaac ccggtgatgt tcaagactgg gaaaaagcag
     1561 cggcaagagc acgactgaag gaaaatctag aggctatgga tgcgttgcag gaacgcttgt
     1621 atgcggaggg ccggcaggcg ctattagtcg ttttgcaggc tatggatgcc gccggtaagg
     1681 atagcaccat cgaggcggtg acacatggcc tcaacccgca ggggtgcagg gtgaccaatt
     1741 ttaaagcgcc gactccgcct gaattggccc atgattttct ttggcgcgtc catcagcacg
     1801 tccccgccca ggggatgatc gggatcttca accgctctca ctacgaagac gtgctcatcg
     1861 gcagggtaaa aaagctagca cccgctcgcc ttattgaaaa gcgctatggt catatcaatg
     1921 actttgagcg gttattgaca gatcacggca cccggatcgt caagatccta ttgcatatct
     1981 cacccgaata tcagctcgag cagttcaggg agcgcctcca agacccggag aagcactgga
     2041 atttcaaccc cgaggatcta aaagagcgcg tcctttggaa ggattacatg acggcttatg
     2101 aggaggtact gcggcgtacc tcgaccgact atgcaccctg gtttgtggtg ccctcagagc
     2161 acaaatggtt tagaacgatg gtggtaagtg agctgatccg aaaaacgcta gaacaaatgg
     2221 atccagagta tcccaaactc acctttgacc cggcggattt tgatcttctt aatacgctca
     2281 agtaaaaaca taactcaagc gaggacacct gtggcaggac tattccgtga ccagatcaag
     2341 gcgggtgatc tattgatcgg gacgctggtt acacttgctt ctcccgaggt cactgagatc
     2401 atggtagaga caggctttga ctggctgttc attgactgcg aacatgctcc cttcggggcc
     2461 caaacagctc aggccctatt gcaagct
//
LOCUS       DASQSL010000723         1620 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_30463, whole genome shotgun sequence.
ACCESSION   DASQSL010000723 DASQSL010000000
VERSION     DASQSL010000723.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1620
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30463"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            424..1164
                     /locus_tag="VE844_07450"
     CDS             424..1164
                     /locus_tag="VE844_07450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01185.1"
                     /translation="MPQDGGANRFFPPLDQALVKAMACELVAETQQPLSRQSLADVTA
                     RAHKALGKPLSRSTVWRILDTDAIKPWRYKYWIFPRDPHFAEKAGPILDLYAGLWQGQ
                     PLGPKDHILSADEKTSIQARLRCHPSLPPAPDRPARIEHEYERGGALQYLAAWDVRRG
                     YVMGRCEPTTGIEPFGRLIHQVLAEEPYRSGERLFWIVDNGSSHRGEAAKKRLRQVDS
                     VSFWSIPQSMPVGSIKSRSISPSSNGRY"
     gene            1161..1358
                     /locus_tag="VE844_07455"
     CDS             1161..1358
                     /locus_tag="VE844_07455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01186.1"
                     /translation="MTPNDFADLEAIRLRLALYEELSNQSPTPFQWKFDRTKLVALLA
                     KIEARQMALADTPLHCLEEAA"
     gene            1456..>1620
                     /locus_tag="VE844_07460"
     CDS             1456..>1620
                     /locus_tag="VE844_07460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011735351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HZC01187.1"
                     /translation="MTDTIKGSEVRRADYPIDSLFLDRWSPRAMSGEEISEAELMVLF
                     EAARWAPSSYN"
BASE COUNT          332 a          488 c          462 g          338 t
ORIGIN      
        1 ggtcggctcg tcactacttg gcgtggatcg aaatggctgc ctgtgtcatc ttgctccgtt
       61 cgggttttgt ctcatagtcc taagtgctcc gtttcagaaa tgatgaccag gttgcaaggg
      121 atgtcatata atcttccggc acgtaaggat actgtaccat tccgattggg aggatatgcc
      181 ccatgcctgg gcccacaccg aggttctgcc ccgtctttcc tgaggacttt ttgtggcaag
      241 cccgccttga gctccgacgc aagaccgttc cgcatcagtc cgtccagcga taccagcttg
      301 ctttgctgct ccatcagggg ccgcacgtac cccatgagga ggccggccga cacgtgggcc
      361 tttcggagtg tcaggttcgg cgttggcgca agcgttgggc cgctggggac ttctccgtgg
      421 cggatgccgc aggacggggg cgcaaaccgg ttttttcccc cactggacca ggcgctggtc
      481 aaggcgatgg cctgcgaact ggtggcggaa actcagcaac cgctgagccg gcagtccctg
      541 gccgacgtca ccgcacgggc ccacaaagcg ttgggcaaac cgcttagtcg tagcacggtg
      601 tggcggattc tggataccga tgccatcaag ccgtggcggt acaagtactg gatctttcca
      661 cgtgatccac actttgccga gaaggccgga ccgattctgg atctgtatgc gggcctctgg
      721 caaggccagc cccttggccc caaggaccac atcctcagtg ccgacgagaa gacgagcatt
      781 caggcccgcc tccgctgcca tccatccctg ccccccgccc cggaccgacc agcccgcatc
      841 gagcatgaat acgagcgcgg cggtgccctg caatatctgg ccgcctggga tgttcgccgg
      901 gggtacgtga tgggacggtg tgaaccgaca accggcatcg aaccctttgg ccggctgatc
      961 catcaagtgc tggccgagga accgtatcga tccggggaac gcctgttctg gatcgtggac
     1021 aatggctcgt cgcatcgtgg tgaagctgca aagaagcggc tgcgtcaggt cgattccgta
     1081 tcattctggt ccatacccca gtccatgcca gttggctcaa tcaagtcgag atctatttct
     1141 ccatcatcca acggaaggta ttgacaccca atgacttcgc cgacttggaa gcgatccggc
     1201 tccggctagc cttatacgaa gaactttcca accaaagccc aacacctttt cagtggaagt
     1261 ttgaccgcac caaactggta gccttgttgg caaagatcga agcccgtcaa atggccctcg
     1321 cagatacccc actccactgc ctggaggaag cagcataacc tggtcatcat ttctgaaacg
     1381 gagcacttag ggtgcttctc gcatcatcgt ccataaatta tactgcgacg cgtcgctgag
     1441 ataggagcgt aagacatgac agacacgatc aaaggaagtg aggtacgacg agccgactat
     1501 ccgatcgaca gccttttcct agaccgctgg tcgccgcgcg ccatgtcggg cgaggaaatt
     1561 tcggaagcgg agctcatggt gttgttcgaa gctgcccgct gggcaccgtc gtcctacaac
//
LOCUS       DASQSL010000724         1190 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_86045, whole genome shotgun sequence.
ACCESSION   DASQSL010000724 DASQSL010000000
VERSION     DASQSL010000724.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86045"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..849
                     /locus_tag="VE844_07465"
     CDS             <1..849
                     /locus_tag="VE844_07465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran dehydrogenase subunit B"
                     /protein_id="HZC01188.1"
                     /translation="DLLIFAGTDVVRDCPRFFERVVWNEHSLFDINPSERSVVYLGRG
                     LDTTAGETPKGHKPRHIPCEVDQLGEVALVIRALLAGQILQSAMVAGVKIGELQALAE
                     RMKQARYGVMVWSPGQLNFPHADLIIESLCDLVKDLNQFTRFAGLTVAGSGGGISAAS
                     VCAWQAGFPLRTSFRSGYPVYDPWRYSAQRLVAREETDAVVWISSFHPESPPVTKIPT
                     VVIGLPQLHLKQEPEVFIPVATPGVDHAGQLIRCDNVVSLPLRQVRTSPLPMVAGVLN
                     AIQHAL"
     gene            856..>1190
                     /locus_tag="VE844_07470"
     CDS             856..>1190
                     /locus_tag="VE844_07470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010962054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran dehydrogenase subunit A"
                     /protein_id="HZC01189.1"
                     /translation="MLIKFSGGKVYDPLNGVNGEIRDLFISNGRIIEKPADGVRIDKT
                     YEVSDRVVMAGAIDPHTHIGGGKVTIARSLIPEDHRSDPVAHTRLTRAGCGHAAPSTL
                     TTGYRYAEMG"
BASE COUNT          230 a          349 c          350 g          261 t
ORIGIN      
        1 gatcttttaa tatttgccgg caccgatgtg gtaagggact gtccccgctt cttcgagcgc
       61 gtggtatgga acgagcattc cctgttcgat atcaatccaa gcgaacgctc tgtggtctat
      121 ctcggacgtg gactggatac cacagcgggt gaaaccccca agggccataa gccccggcat
      181 atcccgtgcg aggtcgatca attaggcgag gtagcccttg tgatccgcgc cttgctggca
      241 ggtcaaatcc ttcaatccgc tatggttgcc ggggttaaga tcggtgagtt gcaggccctt
      301 gctgaacgca tgaagcaggc ccgctatggg gtcatggtct ggtcgcccgg tcagctcaac
      361 ttcccccatg ccgatctcat catcgagtcg ttatgcgact tggtaaagga tctgaatcaa
      421 ttcacccgat ttgccgggtt gacggtggcg ggtagtggcg gtggtatatc ggccgcgagt
      481 gtgtgcgctt ggcaggctgg cttcccgctc cgcacgagct ttagatccgg ttatcccgtc
      541 tacgatccat ggcgatattc tgcccagcgc ctggtggccc gtgaggagac ggatgccgtg
      601 gtatggatct cctcattcca ccccgaatct cctccggtca ccaagatacc gacggtggtc
      661 atcggcctgc ctcagcttca cctgaaacag gaacccgagg tttttatccc ggtggccaca
      721 ccgggtgtcg atcatgccgg acagttgatc cgttgcgaca acgtggtgtc cctcccccta
      781 cgccaggtac ggacatcgcc tctgcccatg gtggcggggg tgctcaatgc aatccaacac
      841 gccctgtgac aaccgatgct cattaaattc tccggtggga aggtctacga tcccttaaat
      901 ggggtcaatg gcgagatccg ggatctcttt atcagcaacg gcaggatcat agaaaaaccg
      961 gctgatggtg tgcgcatcga caaaacctat gaggtgagtg atcgggtggt gatggcgggc
     1021 gcgatcgatc cccacactca tatcggcggg ggcaaggtca cgatcgcccg cagcctgatc
     1081 ccggaagacc atcgctcgga tccagtcgcc catacgcggc tgacacgcgc gggctgcggc
     1141 catgcggctc cctctacgct caccaccggc taccgttatg cggagatggg
//
LOCUS       DASQSL010000725         1578 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_86049, whole genome shotgun sequence.
ACCESSION   DASQSL010000725 DASQSL010000000
VERSION     DASQSL010000725.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1578
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86049"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1578
                     /locus_tag="VE844_07475"
     CDS             <1..>1578
                     /locus_tag="VE844_07475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC01190.1"
                     /translation="DGKVHRYWSIVENRRTQGNRIVQRQVLYLGEINDNQQAAWCKTI
                     EVLQEGQAQPQAVAIFPEDRIAPALGCEVVSIKLSELQLHRPRQWGACWLACQLWDQL
                     RLDEFWSDKLPTSRQGTRWLNVFKTWVCYRLIDPGSEWRLHRHWYEQSAMGDLLGEDV
                     GLVQIDKLYRCLGKLLPHKEDLFTYLKQRWQALFDVGFEVLLYDLTSTYFESDPPEES
                     KRKFGYSRDKRPDCVQVVIALIVTPDGFPLAYEVMAGNTSDKTTLADFLKKIEKQYGK
                     AHRTWVMDRGIPTEETLSQMRAAQTPLHYLVGTPKGCLSKLEKAFLKLPWEQVRESVE
                     VKRIEQAGELYILSRSLGRVHKERSMRRRRLKRLCKRLRELQQQKLTRDELLIKLGAA
                     KKEAGRAYALIDLHLPAKDQAVTPESFTFSLNRNKLRTVRRREGSYRLRSNLTRAPPA
                     QLWQYYIQLTEVEQAFKELKGDLSIRPIYHPKDTRIEAHIFVAFMAYCLQVTLKHRLR
                     ALAPGLTPRAILEKFAA"
BASE COUNT          379 a          400 c          467 g          332 t
ORIGIN      
        1 aagacggaaa agtacaccgc tattggagta ttgtggaaaa ccggcgtacg caggggaatc
       61 gcattgtcca aaggcaagtg ttgtatttgg gggagatcaa cgacaatcag caagccgcct
      121 ggtgtaagac gatcgaggta ctccaggagg gacaggccca gccgcaggcg gtggcgatct
      181 tcccggaaga ccggatagcg cctgccttgg gctgtgaggt tgtgagcatc aagctcagtg
      241 aactgcagct acaccgtcct cggcaatggg gcgcctgctg gctggcctgt caactgtggg
      301 atcagctgag gctggatgag ttttggtcgg acaaattacc caccagtcgc caagggacac
      361 ggtggctgaa tgtgtttaag acctgggtct gttaccgctt gatcgatccg ggtagtgagt
      421 ggcggctgca ccggcactgg tatgaacaaa gtgcgatggg tgatctcttg ggggaggatg
      481 ttggtctggt gcaaatcgac aagctgtatc ggtgtttggg caagttgttg ccccataaag
      541 aggacttgtt tacctatctc aagcaacgct ggcaggcgct gttcgatgtg ggttttgagg
      601 tgcttctcta cgatttgacc agtacctatt ttgaatcgga tccgcccgag gaaagtaaac
      661 gaaaatttgg ttacagccgc gacaaacgtc ccgattgcgt gcaggtggtg atcgccttga
      721 tcgtgactcc ggacggcttt ccactggcct atgaggtcat ggcggggaat acttcggaca
      781 agactacctt ggccgacttt ctgaagaaga tcgagaaaca atacggaaaa gcccaccgca
      841 cctgggtgat ggaccgaggg ataccgacgg aagagaccct gagccaaatg cgcgcggccc
      901 agacccccct tcattatctt gtgggcacac ccaaggggtg tttgagcaag ctggaaaaag
      961 cgtttctcaa gttgccttgg gaacaggtcc gcgagtcggt agaggtcaaa cggatcgagc
     1021 aagcgggcga gctttatatt ctgtcgagaa gtttgggccg ggtgcacaag gagcgctcga
     1081 tgcgtcggcg gcgattgaaa cggctctgca aacgcctgcg cgagctccaa caacaaaaac
     1141 tgacgcgtga tgagctgctg atcaaactcg gggcggctaa gaaagaggca ggacgggcct
     1201 atgcgcttat cgacctccat ttgccagcaa aagaccaggc cgtcaccccc gagagcttca
     1261 cattttctct gaacagaaac aaactccgaa cggttcggcg tagagaagga agctaccggc
     1321 tccgctctaa tctcacccga gcacctccgg ctcaattgtg gcagtactac atccaactca
     1381 ccgaggtcga gcaggccttc aaagaactca aaggtgattt gtccatccgt ccgatctatc
     1441 acccgaagga cacgcgtatc gaagcgcaca tctttgtcgc ctttatggcg tattgtcttc
     1501 aggtgaccct caaacaccgg ctacgcgcct tggcgccagg gttaaccccg agagcaatat
     1561 tggaaaagtt tgcagcta
//
LOCUS       DASQSL010000726         1726 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_19879, whole genome shotgun sequence.
ACCESSION   DASQSL010000726 DASQSL010000000
VERSION     DASQSL010000726.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1726
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19879"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1499
                     /gene="lon"
                     /locus_tag="VE844_07480"
     CDS             <1..1499
                     /gene="lon"
                     /locus_tag="VE844_07480"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002640806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HZC01191.1"
                     /translation="WLVELPWNALSTDQLDIHQARAVLDTDHYGLQDVKDRIIEYLAV
                     RQLRAERQVATDESQASSGREAGAILCFAGPPGVGKTSLGQSIARALGRHFTHMSLGG
                     MRDEAEIRGHRRTYIGAMPGRIIQAIKRAGTRNPVFMLDEVDKIGNDWRGDPSSALLE
                     VLDPAQNNAFRDHYLDVDFDLSHVIFITTANQLETIPDPLRDRMEVLMLDGYTEHEKV
                     CIARAYLVPRQCQTNGLHPEEITFTDEALYKVVRNYTREAGVRNLERQISAVCRKTAV
                     QIASHAVEHMEITPERVRDDLKQELFVSEVSESHTIPGIVTGLAVTSAGGDILFIEAT
                     RMKGKGGLTLTGHLGDVMRESAQLAHSYVRSKAVELDIDPDVFERTDIHLHVPAGAIP
                     KDGPSAGVAMVVAIASVLSERPARHNIGMTGEITLRGRVLPVGGVKMKVLAAHRAGLN
                     TVIVPKWNEHDLDELPEDVRQSMRFISVEMIDDVLHASLQTGTGAEGM"
BASE COUNT          380 a          483 c          505 g          358 t
ORIGIN      
        1 actggttggt ggagctaccc tggaatgctc tgagcacgga ccagttggat atccatcagg
       61 cccgtgctgt gctcgatacc gatcactatg gtctccaaga tgtcaaagac cgtatcatcg
      121 aatacctcgc ggtacgtcaa ctgcgagcgg agcgccaggt ggcgactgat gagagccagg
      181 cgagctccgg gcgcgaggcc ggcgccattt tatgcttcgc gggtccacca ggcgtgggca
      241 agaccagttt aggtcaaagt atcgcccgcg cacttgggcg acacttcacc cacatgagcc
      301 tgggaggcat gcgcgatgaa gccgaaattc gaggtcatcg ccgcacctac atcggggcca
      361 tgccgggccg catcatccag gccatcaaac gggctggcac ccgcaacccg gtctttatgc
      421 tcgatgaagt ggacaagatt ggcaacgatt ggcgaggcga cccgagtagc gccttactgg
      481 aagtcctgga ccccgcacag aataacgcct tccgcgatca ctatctcgat gtggattttg
      541 acctcagcca tgtcattttt attaccacgg cgaatcaatt agaaacgatt ccagaccctt
      601 tgcgggatcg catggaagtt ctcatgctcg atggctacac cgaacatgag aaagtatgca
      661 tcgccagggc ctatttggtt ccgcgtcagt gccagacaaa tggtctccac ccggaagaga
      721 tcaccttcac cgatgaggcc ctgtacaagg ttgtgcgcaa ctatacccgt gaagccggcg
      781 tgcgcaatct ggagcggcag atcagtgccg tgtgccgcaa gaccgctgtc caaattgcct
      841 cgcatgcggt ggagcacatg gagatcacac cggaacgggt acgggacgat ctaaagcagg
      901 agctctttgt ctcggaggtc tctgagtcac acacgattcc cggtattgtc acgggactcg
      961 ccgtgacctc ggcgggcggc gacatcctgt tcatcgaggc gacgcgcatg aagggcaagg
     1021 gtggcttgac gctcaccggg caccttggag acgtgatgcg ggaaagtgca cagctggcgc
     1081 atagctatgt ccgttctaag gccgtcgagt tggatattga tccggacgta ttcgaacgga
     1141 cagacattca cctgcacgtt ccagcgggtg cgattccaaa agatggtccg tcggccggtg
     1201 tggcgatggt cgtggctatc gccagtgtgc tcagtgaacg cccggcacgc cacaatatcg
     1261 gcatgaccgg cgaaattacc ctccgcggac gggtcttgcc cgttggaggc gtgaaaatga
     1321 aagttttggc cgcccaccga gccgggctca ataccgtcat tgtgcccaaa tggaatgaac
     1381 acgacctaga cgaactcccc gaggatgtgc gccaatctat gaggtttatc tcagttgaga
     1441 tgattgatga cgtgctgcat gcgtctctac agacggggac aggagccgaa ggtatgtagt
     1501 gagcactcat tgagcggatt gtgcccctat tccggacagg tcgaatccct tatggtagcg
     1561 tgggacgttt gtgttgccgc ttgtacgcct ggatcgcacg cagacaggaa ggacatacgt
     1621 catggagacg cagcgcctgt cctgtctgca aaccgtacgc caagtcccat tcggcgttat
     1681 atcccgcttt catataccat gattaaccgt gtcgttccgc acgacc
//
LOCUS       DASQSL010000727         1279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_183118, whole genome shotgun sequence.
ACCESSION   DASQSL010000727 DASQSL010000000
VERSION     DASQSL010000727.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1279
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183118"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1279
                     /locus_tag="VE844_07485"
     rRNA            <1..>1279
                     /locus_tag="VE844_07485"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          305 a          328 c          439 g          207 t
ORIGIN      
        1 actggatggt ctagggggcc gacaagccta ccaaaatcag ccaaactccg aatgccggtg
       61 agtgagagcg cggcagtgag actgcggggg ataagcttcg tagtcgaaag ggaaacagcc
      121 cagaccaccg gctaaggtcc cgaagcgtgt gctaagtggg aaaggatgtg gggtcgcaca
      181 gacaaccagg aggttggctt ggaggcagcc atccttgaaa gagtgcgtaa tagctcactg
      241 gtcaagtgat cccgcgccga caatgtagcg gggctcaagc acaccaccga agccgtggcg
      301 ttcacacaat cgatccgcac tcccatccgt gggggtgtgc agtcgtgtgg acgggtaggg
      361 gagcgtcgtg cggcgtgtga agcggcgggg tgacccagcc gtggacgccg caggagtgag
      421 aatgcaggca tgagtagcga aaggggagtg agaaactccc ccgccgaatg accaagggtt
      481 cctgggccag gctaatccgc ccagggtgag tcgggaccta aggcgaggcc gacaggcgta
      541 gtcgatggac aacgggttga tattcccgta cccgcatgag cgcgcccatg gtgaacccgg
      601 tgatgctaac cgcccgaaca ccgccggtga tcctttcgag gtgagccggc gggactagcg
      661 cgggatccgg actggcagta ggcaagcgat ggggtgacgc aggaaggtag tcctaccggt
      721 gagtggtagt accggtgcaa gggtgtggcc cgtccgatag gtaaatccgt cggacaacag
      781 ggtgaggcct gacgcatagc cgaatgaggc gaattggatg atcctatgct gccgagaaaa
      841 gcctctagcg agttctcatg cggcccgtac cccaaaccga cacaggtggt caggtagaga
      901 ataccgaggc gatcgagcga actgtggtta aggaactcgg caaaatgccc ccgtaacttc
      961 gggagaaggg gggccgcttc ccgtgaacac ccgtgcggtg ggcagcgggg ggtggccgca
     1021 gagaccagtg agaagcgact gtttactaaa aacacaggtc cgtgcgaagt cgtaagacga
     1081 ggtatacgga ctgacgcctg cccggtgctg gaacgttaag gggacgggtt agccgcaagg
     1141 cgaagctcag aactcaagcg ccagtaaacg gcggtggtaa ctataaccat cctaaggtag
     1201 cgaaattcct tgtcgggtaa gttccgacct gcacgaatgg cgtaacgact tctcagctgt
     1261 ctcaaccaca ggctcggcg
//
LOCUS       DASQSL010000728         1595 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_86079, whole genome shotgun sequence.
ACCESSION   DASQSL010000728 DASQSL010000000
VERSION     DASQSL010000728.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1595)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1595)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1595
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86079"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..452)
                     /locus_tag="VE844_07490"
     CDS             complement(<1..452)
                     /locus_tag="VE844_07490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020721965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HZC01192.1"
                     /translation="MSSQALDLLTSQDYKWGFVTDIDQEAIPPGLNEDVIRLIAAKKH
                     EPDWMLEWRLKAYRYWEKLEKSEAEPKWANVHYPPIDYQDIIYYAAPKPKKVLNSLDE
                     VDEELLRTFDKLGIPLEEQKRLTGVATDAVFDSVSVATTFKAKLAEAGV"
     gene            860..1327
                     /locus_tag="VE844_07495"
     CDS             860..1327
                     /locus_tag="VE844_07495"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZC01193.1"
                     /translation="MAELTSLLGMSHVAVCVRDLDRSLQFYRDLLGFRVLKDAVQDTR
                     TGGLPHLYRDRHAQRRVVHLQAAAGANMPVLVMTEHPGDTVGGEPIMLDQIGISHLSF
                     TVENVDALTKRLLAQGAETCGPPDAFKDAQGRIRTVFFRDPDGILVQFDEGLE"
BASE COUNT          297 a          481 c          444 g          373 t
ORIGIN      
        1 acgccggcct cggccagctt cgccttgaac gtggtcgcca cggagacgct gtcgaacacc
       61 gcgtcggtgg ccacaccggt gaggcgcttc tgctcctcca gcgggatgcc cagcttgtcg
      121 aaggtgcgca gcagctcctc gtcgacctcg tccaggctgt tcagcacctt cttcggcttc
      181 ggcgccgcgt agtagatgat gtcctggtag tcgatcggcg ggtagtggac gttcgcccac
      241 ttcggctcgg cctcggactt ctcgagcttc tcccagtatc gataggcctt caggcgccac
      301 tcgagcatcc aatcgggttc gtgctttttg gccgcgatga ggcggatgac gtcttcgttc
      361 aagcccggtg ggatcgcttc ttgatcgata tcagtcacaa agccccactt atagtcttgg
      421 cttgtgagta aatccaacgc ttggctgctc ataagttctc ctcagcggat gtgtcggaag
      481 gggttgccat tccctcgcat gcgtagcctg ctaaccgggt gatttcgtaa tctcttcata
      541 tagatatata ggtataagcc ctcgaacgct caagacctaa tgtacgcaaa ctgtacataa
      601 aagtcaagat tagatgccgc gatttggcgc gaaaaaattt cgccagaggc ggctttttgg
      661 ccgtcttgca cgtctgcacg cccaggcaat cccgcgcatc cgcggcgtct ttgctggcca
      721 cgcagatgac gcctcgaagg cacgtttccg cttgcgccgc ttctaccatg aggttatgct
      781 tgggcggtca atggcaggct tcagtgtctg tgccgaatgt tcccgtcatc gttggggcga
      841 ccgcgaagga gaaaggcgta tggccgaatt aacttcgttg ttaggcatgt cgcatgtcgc
      901 cgtttgcgtc cgcgatctcg atcggtcgtt gcagttttat cgcgatctct tgggattccg
      961 agtactgaag gacgccgtgc aggacacccg cacgggaggg ctgccgcacc tataccgcga
     1021 tcgacacgcg cagcggcgcg tggttcacct ccaggctgcg gccggggcaa atatgccggt
     1081 tctggtgatg acagaacacc cgggggacac ggtcggcggg gagccgatca tgctagatca
     1141 gatagggatc agccatcttt ccttcactgt tgaaaacgtc gatgccctca ccaagcgcct
     1201 gctcgctcag ggcgctgaga cctgcggccc accggatgct ttcaaagatg cccagggccg
     1261 catccgcacc gtctttttcc gggatcccga tgggatttta gtgcagttcg atgaaggttt
     1321 agaatagaac cgtcgggggc gattctagtt gacacaccct gcaccccccc ttaaaataca
     1381 gccacttcac gggtatttgt gctgcgcatg tctgctatag ctgatgagga gcatgcatat
     1441 gcgtaacacg ctcgaatcac cccagacttc tggcatgcct tccacattcc tataccgtcc
     1501 gccttctccc cgctttctgg cgagaccgcg actcctcacc cgcccctaac ccctccactg
     1561 tggagggggt ctcttgactg caccctgatt ccaag
//
LOCUS       DASQSL010000729         1272 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_100900, whole genome shotgun sequence.
ACCESSION   DASQSL010000729 DASQSL010000000
VERSION     DASQSL010000729.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1272)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1272)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1272
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100900"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..893)
                     /locus_tag="VE844_07500"
     CDS             complement(<1..893)
                     /locus_tag="VE844_07500"
                     /inference="COORDINATES: protein motif:HMM:NF017652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-5-aminohexanoate cleavage protein"
                     /protein_id="HZC01194.1"
                     /translation="MGNIGGDDPVIITCALTGGIHGKEANSNLPEQPDEIVDQGVAAW
                     RAGAAVLHVHARNPDGSNTMDQAIYSELHERLCSETDAVVQLTTGGSPMLSVEERLNT
                     VFLAPEMCSLNMGLLNFFIRGEQVFFSNHRSDIEQFAREISARDVKPELEVYNSAMLE
                     EVDHLLSLEILKPPYTINFVLHTPTQGGQRGTPQNLLDMVDRLRDLPVSQEDLRVNVS
                     SMGPTQLTITTIGLAMGLSVRVGMEDNVLYRRGEPVESNAQLVERTVRIAHELDREPA
                     TPDEARQRLGLRGRDSGQLPAT"
     gene            complement(1052..>1272)
                     /locus_tag="VE844_07505"
     CDS             complement(1052..>1272)
                     /locus_tag="VE844_07505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ketopantoate reductase C-terminal
                     domain-containing protein"
                     /protein_id="HZC01195.1"
                     /translation="QVGATKASMLQDLERGVKTEVDVINGAVVERGQAHGVLTPVNER
                     VVELVHAMEKGERRPHPEVFQELRSLLD"
BASE COUNT          230 a          390 c          354 g          298 t
ORIGIN      
        1 gtggctggta gttggccaga atcccttccg cgtaggccca gcctctgtct cgcctcgtcg
       61 ggtgttgccg gctcacgatc tagctcgtgg gcaatacgca cggtgcgctc gacaagttgc
      121 gcattgctct ctaccggttc accacgcctg taaagtacgt tgtcttccat cccaacccgc
      181 acgcttaaac ccatggcgag gccaatggtg gtaatcgtca gctgagtcgg acccatcgag
      241 ctcacgttga cgcggaggtc ttcctgggac accggcagat ctcgcaggcg gtccaccatg
      301 tcgagcaaat tctgcggcgt gccccgctgc ccgccctgtg ttggcgtgtg gagcacgaag
      361 ttgatcgtgt acggaggttt caagatctcg aggctcagca gatggtcaac ttcctcaagc
      421 atcgcgctgt tgtagacctc tagctcgggc tttacgtcac gggcgcttat ctcgcgtgcg
      481 aactgctcga tatccgaacg gtggttcgag aagaagacct gctcgccccg aataaagaag
      541 ttgagcagtc ccatgttgag cgaacacatc tcgggcgcga ggaacacggt gtttaatctc
      601 tcctcaaccg acaacatggg gctgcctccg gtagttagtt gaacgaccgc gtcggtttcg
      661 gagcacaagc gctcgtgcag ctcgctgtat atggcttggt ccatagtatt agagccgtcg
      721 gggttacgtg cgtgtacgtg gagcacagct gcccccgcgc gccaagctgc aaccccctgg
      781 tcaacgatct cgtcgggttg ctccggtagg ttggagttag cctccttgcc gtggatcccg
      841 cccgtcaggg cgcaggtgat gatcaccggg tcatcgccgc cgatgttacc cattctcact
      901 tgggcctcct aactcaggtc tttatctcga ggactactgc cgtcttgatg tttttctgtg
      961 atcacccctc tccattatct agctaacctc gacaggacac acgatgaggt tagatctttg
     1021 agtgctgacg tcgtgtttac caaggccgcg tctaatccaa gagggatcgg agctcttgga
     1081 acacctctgg gtgtggcctg cgctcgccct tctccatggc gtgcacaagc tctaccacgc
     1141 gttcgttcac aggcgtcagc acgccgtgcg cttgacctcg ttcaaccacg gcaccgttga
     1201 taacgtctac ctcggtcttt accccgcgct ccaggtcctg gagcatcgag gccttggtag
     1261 cacccacctg ac
//
LOCUS       DASQSL010000730         1197 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_100907, whole genome shotgun sequence.
ACCESSION   DASQSL010000730 DASQSL010000000
VERSION     DASQSL010000730.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1197
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100907"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..144)
                     /locus_tag="VE844_07510"
     CDS             complement(1..144)
                     /locus_tag="VE844_07510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01196.1"
                     /translation="MIRISVEVGRGAAHYTVAVQAESIERALEIVERHNPGCEAKVAP
                     HRP"
     gene            498..926
                     /locus_tag="VE844_07515"
     CDS             498..926
                     /locus_tag="VE844_07515"
                     /inference="COORDINATES: protein motif:HMM:NF021193.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PGPGW domain-containing protein"
                     /protein_id="HZC01197.1"
                     /translation="MIGRIKKDWQLFKASKPGYRFRDHYRRHRRRSRQRRPSQGRFDF
                     RKVLFIVVGITIAITSIVLGPLPGPGLGTFLLGLIILASELRIAARVLDWAEVILRRP
                     ARRAKDAWASLPRWASILIGVGLWIGGVTLGLWVLLYGLG"
BASE COUNT          238 a          308 c          342 g          309 t
ORIGIN      
        1 tcagggtcga tggggagcta ccttagcctc gcagccaggg ttgtgcctct ccacaatctc
       61 caaggcccgc tcgatactct cggcctgaac cgctaccgtg taatgggcag cacctcggcc
      121 tacttcgacc gagatcctta tcacttgacg gctcctttct tcttctgggt gcgttgcgta
      181 ctatttgtta tgacctcgtt attaactctt agcaacagtc gtgtaacaag ttagtaacaa
      241 cgatacagtg aacttggagg gcatatctgg cgcttcgaga ggactatatg cgcttggctg
      301 gatacagttc ccgagagggc ctcttctggg cagctgagtg aatagagata ttcttggagg
      361 aaggctcagt tttaggttag gcgagatggg cctcgccgcc tgctatacct ttctggcgaa
      421 accggacatg agctccacct acttgggctt ccgttgttac actaaaccgg ctgcgatagg
      481 gaaaatattg agtagcattg atcggaagaa taaaaaaaga ttggcagctg tttaaggcta
      541 gcaagccggg ctaccgcttt cgagaccatt atcgccgcca ccggcgacgc agccgccagc
      601 gaagacctag ccaaggtcga ttcgattttc ggaaggttct cttcatcgtt gtcggcatca
      661 cgatcgcgat cacgagcatc gtcttagggc ccttgccggg cccaggcttg ggcaccttcc
      721 tcctggggct gataatcctc gcgagcgaac ttcggatcgc cgcccgcgtc ttagattggg
      781 ctgaggtgat acttagaagg ccggcgcgac gagccaaaga cgcctgggcg agcttgccgc
      841 ggtgggcaag cattctgatt ggggtggggc tatggattgg tggcgtcacg ttggggctgt
      901 gggtcctgtt atacggctta gggtaacgtt tatgtccata aggtaccttg cactagaagc
      961 tgaatagtat gcttgtcttg ggtatgcgag gtaattggag actcacttag gttgttcgcg
     1021 ctggcgcctc tttccttcta ggccctcacc gtctctaatt gctggacacc actctgggtt
     1081 agtagggcac ggaagcgcag ctcaggttgt tttgtacttt gagaccgtga ggcgggtctt
     1141 ctctcacgcc tgcgcgttcc agcgtaatca tcctttcgat gccacgttcg atgtact
//
LOCUS       DASQSL010000731         2268 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_86101, whole genome shotgun sequence.
ACCESSION   DASQSL010000731 DASQSL010000000
VERSION     DASQSL010000731.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2268
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86101"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..489)
                     /locus_tag="VE844_07520"
     CDS             complement(<1..489)
                     /locus_tag="VE844_07520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017365163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004358 - glutamate N-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional ornithine
                     acetyltransferase/N-acetylglutamate synthase"
                     /protein_id="HZC01198.1"
                     /translation="MAWQLDPSKLAPIAGVRLGTACASIKRSDRDDIALIGIDEDAVS
                     AAVFTRNLFCAAPVEVARAHLLKNTHPRYLLINSGNANAGTGERGHEQALLTCRTVAD
                     QGQCAIEAVLPFSTGVIGEPLPTVRIGAAIPKAFETLSPQGWQAAARAIMTTDTVSKG
                     YSK"
     gene            complement(526..>2268)
                     /locus_tag="VE844_07525"
     CDS             complement(526..>2268)
                     /locus_tag="VE844_07525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013219318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SEC-C metal-binding domain-containing protein"
                     /protein_id="HZC01199.1"
                     /translation="IVDEFTGRTMPGRRWSEGLHQAIEAKEETPIQNENQTLASITFQ
                     NYFRLYGKLAGMTGTADTEAYEFQQIYGLEVVVIPTHMTMIRKDLGDVVYLTQDEKFK
                     AIIEDIKECHARRQPVLVGTTSIETSELLSGLLKKEALEHQVLNAKFHEKEAHIVAQA
                     GRPGTVTIATNMAGRGTDIVLGGSLDEELKHLEDPDEAVIARIKADWQRRHNEVVAVG
                     GLHIVGTERHESRRIDNQLRGRSGRQGDPGPSRFYLSLRDNLMRIFASDRVAGLMQKL
                     GMQEGEAIEHPWVTKAIENAQRKVEARNFDIRKQLLEYDDVANDQRKVIYQQRNELMD
                     ATDISENINGMRRDVVTHVINAHIPPGSLDEQWDIKGLMEAIEREFGQHLEIQTWLEE
                     DKTLYEETLREKILEAIEQAYADKEAIATPEVMRHFEKAVMLQVVDGHWKEHLAAMDH
                     LRQGIHLRGYAQKNPKQEYKREAFDMFAQLLEDIKRDVIGILSRVQVRAEQDVEAVEQ
                     QRRRMAPMHYSHAKAPPLDEEEAAPAESSQETPAKTQPKPPPFVRAQPKIGRNTPCPC
                     GSGKKYKQCHGRLD"
BASE COUNT          446 a          668 c          595 g          559 t
ORIGIN      
        1 cttggaatat cctttggaca ccgtatccgt ggtcatgatc gcccgggcgg ccgcctgcca
       61 gccttgggga gacaaagtct caaaagcctt ggggatggct gcaccgatgc ggaccgtggg
      121 taaaggctcg ccaataaccc cggtcgagaa gggcaagaca gcctcgatag cgcactgccc
      181 ctgatcggct actgtgcggc aggtcaaaag cgcctgctca tgtccgcgct caccggtacc
      241 tgcattggca ttcccggaat tgatcagaag atagcgtggg tgtgtgtttt tgaggagatg
      301 ggcgcgcgca acctctactg gcgctgcaca aaacaagtta cgggtaaaga ccgctgccga
      361 gacagcgtct tcatcgatcc cgataagggc tatatcatca cggtcagacc gcttaatact
      421 tgcacaggcg gtacccagtc ggaccccggc aatcggcgct agcttagaag ggtcgagttg
      481 ccaagccatc cggctttctt ctcacacgtc aagcgagtgt gaaagctaat ctaaccttcc
      541 atggcattgc ttatattttt taccagagcc gcagggacac ggtgtatttc ttcctatctt
      601 cggttgcgct cgaacgaatg gcggcggttt gggctgtgtc ttagctgggg tttcttggga
      661 cgattcagcc ggcgctgcct cctcctcatc caaaggcggg gccttggcat gactgtagtg
      721 cataggcgcc attctccgcc gctgttgttc aaccgcctcg acatcctgct ccgcccggac
      781 ctgcacccgc gataggatgc cgatgacatc gcgtttgatg tcctcgagca gctgggcaaa
      841 catatcgaag gcctcgcgtt tatattcttg tttgggattc ttctgcgcat agccccgcag
      901 atggatcccc tggcgcaaat gatccatcgc cgccaggtgc tctttccaat ggccatccac
      961 cacttgcagc atcaccgctt tctcgaagtg acgcatgact tcaggggtag cgatagcctc
     1021 cttgtcggca taagcctgtt ctatcgcctc taggatcttt tcacgcaagg tctcctcgta
     1081 cagtgtctta tcctcttcaa gccaggtctg tatctcgaga tgttggccaa attcccgctc
     1141 gatagcctcc atcaatcctt tgatatccca ttgttcatcg aggctccccg gagggatatg
     1201 ggcattgatg acatgggtca ccacatctcg gcgcatcccg ttgatatttt ccgagatgtc
     1261 ggtggcatcc atcagttcat tgcgctgctg atagatcacc ttacgttgat cattggcgac
     1321 atcatcatat tcgagcaatt gcttgcggat atcaaagttc cgcgcctcga ccttgcgctg
     1381 cgcattctca atggccttgg tcacccaggg atgctcgatg gcttctcctt cctgcatgcc
     1441 gagcttctgc atgagccccg ctacgcggtc ggaggcaaag atccgcatga gattgtctcg
     1501 cagcgacaaa tagaaacggc tggggcctgg gtcgccttgg cggccggatc gaccgcggag
     1561 ctgattatcg atacgccgcg actcatgccg ttcggtacca acgatatgca atccacccac
     1621 ggcgacgact tcattatggc gcctttgcca atcggccttg atgcgcgcta tgaccgcctc
     1681 atccggatct tccagatgct taagctcctc gtccaggctg ccacccagaa caatatccgt
     1741 gcctcggccc gccatattcg tggcgatggt gaccgtgccc gggcggccag cttgggccac
     1801 gatatgggcc tccttctcat ggaacttggc attcaatacc tggtgttcca gcgcctcttt
     1861 tttgagcaag cccgacaaca attccgaggt ctcgatcgag gtcgtgccga ccagcaccgg
     1921 ttggcgtctg gcgtggcact ccttaatatc ttcgatgatg gccttgaact tttcatcttg
     1981 ggtaagataa acgacatccc cgagatcctt acggatcatg gtcatgtggg tcgggatcac
     2041 cacaacctcc aggccataga tctgctgaaa ctcataggcc tcggtatctg ccgtaccggt
     2101 catcccagcc agtttgccat ataatctaaa atagttctgg aaggtgattg aggccagcgt
     2161 ctggttttca ttctggatcg gcgtctcttc cttggcctcg atggcttgat gtaggccctc
     2221 tgaccagcgt ctccccggca tggttcggcc ggtaaactca tcgacaat
//
LOCUS       DASQSL010000732         1066 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_183151, whole genome shotgun sequence.
ACCESSION   DASQSL010000732 DASQSL010000000
VERSION     DASQSL010000732.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1066
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183151"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1066)
                     /locus_tag="VE844_07530"
     CDS             complement(<1..>1066)
                     /locus_tag="VE844_07530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005000854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /protein_id="HZC01200.1"
                     /translation="VVGFETLGMGDVNVVGGKNASLGEMIRALSTSGVSVPHGFATTA
                     LAYREFLQHQGLSDRTNAALSALDVDDIKALTETGATIRRWIVATPFPAHLKQAIIAA
                     YRELNRQAGAEISVAVRSSATAEDLPEASFAGQQETFLNVCGLDSLLIAVKHVFASLY
                     NDRAIAYRTHHGFDQRQIALSAGIQQMVRSDMGASGVIFTLDTESGFREVVFITSSYG
                     LGETVVQGAVNPDEFYVYKPNLKTEQPAILRRNLGEKAIKMIFGDKKIPTRIVEVSLE
                     DRAQFSLTDPEVEDLARQALMIEQHYARPMDIEWAKDGTDGKLYILQARPETVKSQGE
                     GQIIERYRLKQHAGVLVTGR"
BASE COUNT          216 a          305 c          319 g          226 t
ORIGIN      
        1 ctgcggccgg tgactaagac cccagcgtgc tgctttaggc ggtagcgttc gatgatctgg
       61 ccctccccct ggctttttac cgtctcgggg cgggcctgga ggatatagag cttcccatcc
      121 gtgccatcct tagcccactc gatgtccatg ggtctagcat agtgctgttc aatcatgagc
      181 gcctggcggg ccagatcctc cacctctgga tcggtgagag agaattgcgc gcggtcctca
      241 agggatacct cgacaatgcg cgtaggaatc ttcttgtccc cgaagatcat cttgatcgct
      301 ttctcaccga gattacgtcg gagtatggct ggctgctcag tcttgagatt cggtttgtaa
      361 acatagaact cgtcgggatt gacagccccc tgtaccacgg tctcacccag tccatacgag
      421 gaggtgatga atacgacctc gcgaaacccc gattctgtgt ccagggtaaa tatgacgccg
      481 cttgcgccca tatcacttcg aaccatctgt tggatcccgg ctgagagtgc gatttgacgc
      541 tgatcaaacc catgatgggt gcgataggcg atggcgcggt cgttgtagag cgaggcgaag
      601 acgtgcttga cggcgatgag aagggaatca agcccacaca cgttcaggaa ggtctcttgc
      661 tggccggcga aagacgcctc cgggagatcc tcggcggtgg ccgaagagcg aacggcgacc
      721 gagatctccg cgcccgcctg gcgattaagc tcacggtaag ccgctatgat ggcctgttta
      781 aggtgcgcgg ggaacggcgt agctacaatc cagcgccgga tcgtcgcgcc ggtttctgtg
      841 agggccttga tatcatcaac gtcgagagcg gacaaggcag cattggtccg gtcggaaagc
      901 ccctggtgct gtagaaattc ccggtaggca agcgccgtgg tggcaaagcc gtggggtacc
      961 gagactcccg atgttgaaag cgctcggatc atctcgccca aggaggcgtt ctttccgccc
     1021 accacattca catcgcccat ccccagggtt tcgaacccga cgacgt
//
LOCUS       DASQSL010000733         1504 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_128103, whole genome shotgun sequence.
ACCESSION   DASQSL010000733 DASQSL010000000
VERSION     DASQSL010000733.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128103"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            289..>1504
                     /locus_tag="VE844_07535"
     CDS             289..>1504
                     /locus_tag="VE844_07535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014253113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01201.1"
                     /translation="MVPQNVAEIIRSHVVLEVESIDRMYLNGYVPSLQTEGGFVHFVR
                     NYLGYRIASTAVIAPMSEAFVRAIEGFAKAQQLDVVAFKKGQRKDDVAKAYLARCTFT
                     EGVLFIGKAQEKAQVFRTTHKKDAETGKSFPWVTRGLALPNHYYFYLVDEDFGPLFIK
                     FCSYFPYAVKVCINGHKWVKRQLAKEGIAFEAWDNGVLSCQNPQRLQELCESLDSEKI
                     DAVFRKWLARLPHPFRTEDRAAGYRYDLAILQAEFSLTQGLDFPRTGRQFFEEIIREN
                     LDLGRPDRVQLIFNRRVTRGTPGLFRTRVLTEGVVPSLHVQYKHSKIKQYHKEGRALR
                     TETTINDTYDFAVGRKLCNLPALREIGFKANRRLLDVQTLSHDCSIGEDRFQAVTGLR
                     CKEPNGPVGCLSA"
BASE COUNT          349 a          438 c          422 g          295 t
ORIGIN      
        1 gctaaaaact tgagaatcga gtataagatc aaattacact atcgggggga gttataaaat
       61 aaagccaact gaaggcacgg gccatattcg tcctctccaa atccaagtcc cagatattgt
      121 tctcgcgctc ctacagctaa cgaggcttcg cctcagaccg acgaggcatg atgagatgcg
      181 gggagggctc cgcggttacc aagtgtggta gtgtagccac gctggcattg gatcgctgag
      241 cgatcggacc ttcaaggtca accaataaga cacgcggagc ccaagagcat ggtacctcaa
      301 aacgtcgccg aaataatccg tagccatgtt gtgctggaag tggaaagcat cgaccggatg
      361 tatctcaatg gctatgtgcc gagccttcaa accgagggcg gtttcgtcca cttcgtgcgg
      421 aactacctgg gatatcgcat cgcgtccaca gcagtgatcg caccgatgag cgaggccttc
      481 gtccgcgcca tcgagggttt tgccaaggct cagcaactgg acgtggtggc cttcaagaaa
      541 ggccagcgca aggacgacgt ggccaaggcg tatctggcac gctgcacctt caccgaaggt
      601 gtgttgttca tcggcaaggc gcaggagaaa gcccaggtgt tccggactac ccacaagaaa
      661 gatgccgaaa ccgggaaatc cttcccgtgg gtcacacgcg gcttagccct cccgaatcac
      721 tattacttct acttggtaga tgaggacttc gggccgctgt tcatcaagtt ctgttcctac
      781 ttcccttacg ccgtgaaggt ctgtatcaac ggtcataagt gggtcaagcg ccaattggcc
      841 aaagagggca ttgccttcga agcgtgggac aacggcgtgt tgtcctgcca gaacccgcag
      901 cgtttgcaag aattatgtga gtcgctcgat agcgaaaaaa tcgacgcggt gttccgcaaa
      961 tggctggcac gccttcccca tccgttccgg accgaagacc gcgccgccgg gtaccgctac
     1021 gacctggcga tcctccaggc cgagttctcg ctcactcagg ggctggattt cccaaggacc
     1081 ggtcggcagt tcttcgagga aatcatccgt gaaaatctcg atctcggacg cccggatcgg
     1141 gtgcagctga tctttaaccg gcgggtgacc cgaggcacgc cgggactctt caggactcgg
     1201 gtcctcaccg agggggtcgt gccttccctg cacgttcagt acaagcactc gaaaatcaag
     1261 cagtaccaca aggaaggccg cgcgctacgc accgagacca cgatcaacga cacctacgac
     1321 ttcgccgtcg gccgcaagct gtgcaatctg cccgccctgc gggagatcgg cttcaaagcc
     1381 aaccgacgtc tgctcgatgt ccaaactctc agccatgact gttcgatcgg cgaagaccgt
     1441 ttccaagcgg tgaccggcct cagatgcaag gaacccaacg ggccagtggg ctgcctttcg
     1501 gcga
//
LOCUS       DASQSL010000734         1068 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_183164, whole genome shotgun sequence.
ACCESSION   DASQSL010000734 DASQSL010000000
VERSION     DASQSL010000734.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183164"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            218..1009
                     /locus_tag="VE844_07540"
     CDS             218..1009
                     /locus_tag="VE844_07540"
                     /inference="COORDINATES: protein motif:HMM:NF025389.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4239 domain-containing protein"
                     /protein_id="HZC01202.1"
                     /translation="MSTTVVFGVLVVIGVCLAAVSGLELVQRLVPAQKRQEHNDVAGF
                     LYAVVGIVYAVLLALLVIAVWEQYQRARETVESEANGVAEVAWLAHRLPEPEHYQLQE
                     DARSYAHEVVDEEWPQMEEGLEGVQSLPEGWDLIDDMRATLQEVEPRTVAEQELYAEG
                     LDRISRFGDARRMRIVAAQEGIPGVLWVVLVFGAVVTVGFTYLFGLRNTWAHRLMVMS
                     LTAVIALVLFAIVAMDYPFSGGARIEPEAFELILERFETSRLSDL"
BASE COUNT          211 a          281 c          345 g          231 t
ORIGIN      
        1 actgagcccg aatcgaggct ccgaggaccg ccaagagggg acgaaggagc ctagatcggc
       61 cgcttcttac cgccaaggaa gcgtggttga gaagccttca gctattttcc agacagtttc
      121 tctcggattc tcagtgaata agctatccgt cgcgcgttag taccgccgcg gctaatatgt
      181 gagcagccta caagcctgta gaaaagggga tatgcctatg tcgaccacag tagttttcgg
      241 cgttctagtg gttatcgggg tttgcctagc cgcagtctct gggctggagt tggtgcagcg
      301 cctggtcccc gcccaaaagc gccaggagca caacgacgta gctggcttcc tctacgctgt
      361 cgtaggcatc gtgtatgccg tgttgcttgc cctcttggtc atcgctgtat gggagcaata
      421 tcagcgggct cgcgaaacgg tagagagcga ggcaaacggt gtggccgagg tcgcctggct
      481 tgcccatcgc ctcccggagc ccgagcatta tcagctgcag gaggacgccc gctcctacgc
      541 ccacgaggtc gtcgacgaag agtggcccca gatggaagag ggcctcgaag gggtgcagag
      601 ccttccggag gggtgggacc ttatcgacga tatgagggca acccttcaag aggtcgagcc
      661 gcgcacggtg gccgagcagg agctatacgc agaagggcta gaccggattt cgaggtttgg
      721 ggacgccagg aggatgcgca ttgtggcagc ccaggagggc ataccgggcg ttctgtgggt
      781 cgttctggtg tttggggcgg tggtaacagt aggtttcacc tacctctttg gcttgcggaa
      841 cacctgggcg cacaggctga tggtgatgtc gctgacggca gtgatcgcgc tggtactctt
      901 cgcaatcgtt gccatggact atccgttctc tggtggagcc cgcattgagc cggaggcctt
      961 tgagctgata ctggagaggt ttgagacgag caggctcagc gacctctgat agcctcaact
     1021 ttatgccata gttttatgcc atagtttccg agaattccct acaccgga
//
LOCUS       DASQSL010000735         2629 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_100948, whole genome shotgun sequence.
ACCESSION   DASQSL010000735 DASQSL010000000
VERSION     DASQSL010000735.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2629
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100948"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..304)
                     /locus_tag="VE844_07545"
     CDS             complement(<1..304)
                     /locus_tag="VE844_07545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease"
                     /protein_id="HZC01203.1"
                     /translation="MNEASFDQVLPAYDDPSAVRLRHWRGFKDRFVRFWVAVGGLSVI
                     IALVLIFFYLLYTVLPLFRPAHIEPVASYPVPGGTQVQTLYLAAEEYAELGLRLSLE"
     gene            complement(477..1478)
                     /locus_tag="VE844_07550"
     CDS             complement(477..1478)
                     /locus_tag="VE844_07550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007143991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS family protein"
                     /protein_id="HZC01204.1"
                     /translation="MLFFNKPLATIGLSLLLPALGLAANVTVDSDLKKYTKVSGVSGN
                     ISSVGSDTMNNLMTLWGEGFKRLYPNVNIQIQGAGSSTAPPALTEGTANFGPMSRPMK
                     NAEIEAFEQKHGYKPTGIAVAIDALAVYVHKDNPIQGLTIPDIDAVFSATRKCGYDDD
                     IGQWGQLGLKGEWASRSIQLYGRNSVSGTYGYFKEHALCNGDFKNNVNEQPGSASVVQ
                     GVTKSLNGIGYSGIGYKTSGVKAVPLAKSEGEELIPATAESAVSGKYPLARALYVYIN
                     KHPNKPLAPLEREFIKMVLSKAGQRVVVKDGYIPLTSAMAQKQLASIEEGGAQVSTK"
     gene            complement(1569..>2629)
                     /gene="fusA"
                     /locus_tag="VE844_07555"
     CDS             complement(1569..>2629)
                     /gene="fusA"
                     /locus_tag="VE844_07555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019139776.1"
                     /note="EF-G; promotes GTP-dependent translocation of the
                     ribosome during translation; many organisms have multiple
                     copies of this gene; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HZC01205.1"
                     /translation="KPFKVGHLFRLQGKAHMEVEAAIPGDICAVAKVDDICFDAVLHD
                     SLDDDHIHLKPLEFPHALFGLGVVPKRRGDEQKLSEVLHKLEAEDPTFHVDREIATNE
                     TVIRGLGELHLRRLLEKMANQYHLEVETHPPRIAYRETITLNAEGHARHKKQTGGAGQ
                     FGEVFLRVEPLARGVGFEFVDQIHGGSIPGQFLPAVEKGVQQVMVAGPVAGYPLQDLR
                     VIVYDGKHHPVDSKEVAFIAAGRKAFLDALAKARPMLLEPIVNIDLNVPESAMGDIAG
                     DLSSKRGQVNGSETLRGGHVLIKGRVPLAELNNYHSRLKAVTGGHGSYSIEFSHYEPV
                     PPRIQQQLAAQYKPREEE"
BASE COUNT          581 a          745 c          743 g          560 t
ORIGIN      
        1 cctccaagct taagcgcaag cccaactctg catattcctc ggccgccaga taaagagtct
       61 ggacctgcgt cccgcccggt acaggatagc ttgccaccgg ctcgatgtgg gctgggcgaa
      121 acaggggcag caccgtgtag agcagataaa agaagatgag gacaagggcg ataatgacac
      181 tgagaccgcc gaccgccacc caaaaccgca caaagcgatc cttaaaccca cgccaatggc
      241 gcaggcgcac ggcgcttgga tcgtcatagg cgggcagaac ttgatcaaag ctcgcttcgt
      301 tcatcggcga ctagattagt ttggacacat gacctgaata tggcgatcac cgcttccctc
      361 accctccgcc ttcaaagaga gagaaggggg gaggggtgag gaaagggtga agggaataag
      421 gtcgagcatg aaagccccat ctaggtaagg ctttcggaac agcatatgaa aagattttat
      481 ttggtgctca cctgggcgcc accctcctcg attgaggcca attgcttttg ggccatagcc
      541 gaagtaaggg ggatataacc atccttgacc acaacccttt ggcctgcctt cgacaagacc
      601 atcttgatga actcccgctc gagcggagcc aggggtttat tggggtgctt gttgatatag
      661 acgtaaagcg cccgcgccag gggatatttg ccgctgacgg cgctctccgc ggtggccggg
      721 ataagctcct ctccctcgct cttcgctagg ggcacggcct tcactcccga ggtcttatag
      781 ccgatccccg aataaccgat gccgtttaag gacttcgtga cgccctgcac gaccgaggcc
      841 gatccgggct gttcattgac attattcttg aaatcgccat tgcagagggc atgctcttta
      901 aaataaccgt aggtacccga gacggaatta cggccataga gctggatcga gcggcttgcc
      961 cactcgcctt tgagacccaa ctgcccccat tggccgatat cgtcatcgta gccgcatttg
     1021 cgggtggccg agaaaaccgc atcgatatct gggatggtca gcccctggat cggattgtct
     1081 ttgtggacat acaccgccag ggcatcgatc gcgacagcga taccggtcgg cttgtaaccg
     1141 tgtttctgct cgaaggcctc gatctcggca ttcttcatcg gccggctcat cggcccaaaa
     1201 ttagcggtgc cttcggtcaa ggcgggcggc gcggttgacg aacccgcccc ctggatctgg
     1261 atattgacgt tggggtagag ccgtttgaat ccttcccccc aaagggtcat caggttgttc
     1321 atcgtatccg agcctacgct cgagatattg ccggatacac cgctcacttt tgtatatttc
     1381 ttaagatcgg aatcgaccgt cacattggcg gcgagtccca gggcgggtaa cagcaaactc
     1441 aagccaatcg tggcaagggg tttgttgaaa aatagcattt atgcctccat acgggatctt
     1501 ttagaagatt tagggcaatt tccaagtatg gctcaactag atgacagaat gatgacatac
     1561 gcttgcagct actcttcctc tcgaggttta tactgggcgg ccagttgctg ctggatcctg
     1621 ggcggcaccg gttcatagtg ggaaaactct atcgagtaag aaccatggcc gccggtcacg
     1681 gccttcagcc gggagtggta gttattgagc tcggccaagg gcacccgccc cttgatgagc
     1741 acatgtccgc cgcgcagggt ctcgctgcca ttgacctgtc cgcgtttgga ggagagatcg
     1801 ccggcgatgt cccccatcgc tgattcgggg acattgagat cgatattgac aatcggttcg
     1861 agcagcatag gcctggcctt ggcaagcgca tccagaaagg ctttgcggcc agcggcgata
     1921 aacgccacct ccttggagtc cacaggatgg tgcttgccat cgtagacaat gacccgcaga
     1981 tcttgcaggg gatagcctgc caccgggcct gcgaccatca cctgctgcac gcccttctca
     2041 acggccggca gaaactggcc ggggatagaa ccgccatgga tctggtcgac aaactcaaaa
     2101 cctacacccc gggctaaagg ttcaacccgc aggaatacct cgccaaattg cccggcccca
     2161 ccggtctgtt ttttatgccg ggcatggcct tcggcgttaa gggtgatagt ctcacggtag
     2221 gcgatgcgag gcggatgggt ctctacctcc aggtgatatt ggttggccat cttctccagc
     2281 aggcgccgca ggtgcagctc ccctaagccc cgaatcacgg tctcgttggt ggcgatctca
     2341 cggtctacgt ggaaggtcgg atcttcggct tcaagcttgt gcaaaacctc cgatagcttc
     2401 tgctcatcac cgcgccgctt gggcacgaca ccaaggccaa agagggcgtg aggaaactcc
     2461 aaaggtttca agtgaatgtg gtcatcgtcg agggagtcgt gcaagacggc atcaaaacag
     2521 atgtcatcga ccttggccac ggcgcagata tctcctggga tggccgcctc gacctccatg
     2581 tgagccttgc cctggagccg gaacaggtgg cctaccttaa aaggtttgc
//
LOCUS       DASQSL010000736         1318 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_59532, whole genome shotgun sequence.
ACCESSION   DASQSL010000736 DASQSL010000000
VERSION     DASQSL010000736.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1318
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59532"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            160..>1318
                     /locus_tag="VE844_07560"
     CDS             160..>1318
                     /locus_tag="VE844_07560"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZC01206.1"
                     /translation="MRGNWKLKISLRRCYYCGFLNRLGLFIGVLFTLVLAGCDAPRAD
                     TLRITGWISTPVEETLMRSMIDAFERRHPGSAVHYEPVTANYMDKLLLMLGTRTAPDI
                     VMLEAFWAPSLVAYDALMPLDKFVVQDPDFAIEDFEPGILNAFRFNDELYGLPKDYST
                     LVLYYNLDMFAEAGLKDPPRTWDEFADYARRLTRDTDGDGLIDQYGYGHAEALEYSLP
                     FVWQNQGEYFDKKGEVGFTDPAFVEALAFLQQLKARGIAVLPTDVGAAWNMDAFGRKR
                     VAMVISGLWAVNFMKETYAQVPYKVAPLPVGKQAASVAFVVSYAMPKHTSHPDRAWQL
                     LRYLTSREGQLIWAQADVGLPPRRSIAQSLSLERDALKSMFIQSLKHARPWQ"
BASE COUNT          272 a          366 c          374 g          306 t
ORIGIN      
        1 aaggcagcac ccaaagggat ctatgtcaga gcagagaggc agtgagcggg tagaggggta
       61 ttttccaaca aagtacgtaa agtctcgcag gattttcaaa accttgatgt tatcaacccc
      121 ttacgtgcgt tcagcagccc ccaaattttt gcttgtttta tgcgcggaaa ttggaagctc
      181 aaaatatctt taaggcgctg ttattactgt ggttttctga atcgtttggg actgtttatc
      241 ggcgtgctct tcacgctggt gttggcgggg tgcgacgcgc cgcgtgccga tactcttcgc
      301 atcacggggt ggatttccac gccggtcgag gagaccctca tgcgctcaat gatagatgcg
      361 ttcgagagac ggcacccggg atccgcagtc cactacgagc cggttaccgc gaattacatg
      421 gataagctgc tgcttatgct gggcacgcgt accgcaccgg atatcgtcat gttggaagcc
      481 ttctgggccc cgtcgctggt cgcctacgac gcgctcatgc cgctcgataa attcgttgtt
      541 caagaccccg actttgctat cgaagacttc gagccgggga tacttaacgc attccgcttt
      601 aacgatgagc tctacggcct gccgaaggat tattccaccc tcgtactcta ttacaatctg
      661 gacatgttcg ccgaggcggg gcttaaggat ccgccgcgga cttgggatga gttcgccgat
      721 tatgcccgcc gcctcacccg agacacggac ggcgacggcc tcatcgacca gtacgggtat
      781 ggccatgcgg aagcgctcga atactcgctc ccttttgtct ggcagaacca gggcgagtac
      841 tttgataaga agggagaggt gggctttacc gaccccgcct ttgtggaggc gcttgccttt
      901 ttacagcaac taaaggcccg gggcatcgcg gtacttccaa ccgatgttgg agccgcctgg
      961 aacatggatg ccttcggccg caaacgtgta gccatggtga tctcaggact ctgggcagtg
     1021 aattttatga aagagaccta tgctcaggtg ccgtacaaag tcgctcctct gccggtcggt
     1081 aagcaggccg cctcggttgc atttgtggtc agctacgcca tgcccaaaca tacctcgcat
     1141 ccagaccggg cgtggcagtt gctgcggtat ctcacaagcc gagagggcca gctcatctgg
     1201 gcccaggctg acgtcggtct gccgccgcga cgctccatcg ctcagagtct ttcactcgag
     1261 cgcgatgcgt tgaaaagcat gtttattcaa agtctcaagc atgcgcggcc ctggcagc
//
LOCUS       DASQSL010000737         2922 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_112642, whole genome shotgun sequence.
ACCESSION   DASQSL010000737 DASQSL010000000
VERSION     DASQSL010000737.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2922
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112642"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1351
                     /gene="glmU"
                     /locus_tag="VE844_07565"
     CDS             <1..1351
                     /gene="glmU"
                     /locus_tag="VE844_07565"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020504442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HZC01207.1"
                     /translation="VILAAGQGKRLHSDLPKVLHALAGKPLLEHVYQAAAGLSKATLY
                     VIYGHGGERVPTALAHLPVRWIEQPEQLGTGHAVAQALPFIPSADTVLVLYGDVPLIG
                     PETLQRLLDASARGRFGLLTARLDKPAGYGRIVRNDDGAVERIVEEKDAGEKERAIDE
                     VNTGMLAVSGGLLKGWTARLDNRNAQGEYYLTDVIAMAVADKVPIDTVAPGSPFEVMG
                     VNDRIQLAELERHYQRLQAQRLMREGVTLLDPARFDLRGELGVGRDVVIDINVVIEGR
                     VRLGNRVTIGPNAYIRDTEMADDVTVLPHCVIEGAVIGQGSRIGPFSRVRPGTLLAEE
                     VHIGNFVEIKKSKVNRGSKINHLSYVGDADVGKNVNIGAGTITCNYDGANKHRTSIGD
                     DVFIGSDTQLIAPVRVGEGATIGAGTTVASDAPAGMLTIGRTRQTVIPNWQRPQKKP"
     gene            1353..2159
                     /locus_tag="VE844_07570"
     CDS             1353..2159
                     /locus_tag="VE844_07570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005006664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HZC01208.1"
                     /translation="MLRIGYYQFRPLFGQIRRNLKKVVSALQGVKADLIVLPELAFTG
                     YHFKDREEVLSLSEDPQTSETVAALIRLCYQQDLYLVAGFSEKRKDKVYNSALLIGPR
                     GVQSIYRKLHLFNNEKQCFDPGDLPLTVQEVRGARLGLMVCFDWAFPEIARILALQGA
                     DIVCHPSNLVLGYCQQAMLTRCLENKVFAITTNRYGADRRPHGELRFTGQSQIVAPGG
                     RLLNRAAAQREALYITEIDPVEARNKAITPLNDLLADRRPDYYQALIQKI"
     gene            2171..2854
                     /gene="trmB"
                     /locus_tag="VE844_07575"
     CDS             2171..2854
                     /gene="trmB"
                     /locus_tag="VE844_07575"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006746354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HZC01209.1"
                     /translation="MIKPLRTIHSFVRREGRITPAQRQALATFSADYCIEADDAPLDL
                     DTVFGRHAPRHLEIGCGNGEALMGLAAQHPENDYLGIEVYRPGLGSLLRGLARERLEN
                     VRIITNDAVVTIECLIDDEALDLIYIFFPDPWPKKRHHKRRLIQPEFASLLRKRLKPH
                     GRLFIATDWEDYAQHILMTLDEAGLVNLASSQNRFAPRPSWRPVTQYEKRSRTLGHRV
                     RELIYAKGG"
BASE COUNT          642 a          726 c          896 g          658 t
ORIGIN      
        1 agttatcctg gccgcaggcc agggcaagcg cctgcactcc gatctaccga aggtcttaca
       61 tgcgcttgcc ggtaaacctt tacttgagca tgtctaccaa gccgcagcgg gcttatcgaa
      121 ggctaccctt tatgtgatct acgggcatgg gggtgagcgc gtgcccacag cacttgccca
      181 tctcccggtc cgctggatag agcagcctga acaactcggc accggtcatg cggtggctca
      241 agccctgccg ttcatcccat ccgcggacac cgtgctggtg ctgtatgggg atgttccgtt
      301 gattggtcca gagaccttgc agcgcttgct ggatgcctcg gcaaggggac gtttcgggtt
      361 actcaccgcc agactcgata agccggcggg ttatggacgg atcgtaagga atgatgatgg
      421 ggcggtggag cgtattgtcg aagaaaagga tgccggtgaa aaggagcgcg ccatcgatga
      481 ggtcaatacc ggtatgctgg cggtctcggg tgggttgttg aagggatgga cagcgcgtct
      541 ggataaccgc aatgcccagg gcgaatacta cctcaccgac gtcatagcga tggcggtagc
      601 ggataaggtt cccatcgata ccgtcgcacc ggggtcgcca tttgaggtga tgggcgtcaa
      661 tgaccgtatc cagcttgcgg agttggaacg gcattaccag cggttgcaag cacagcgcct
      721 gatgcgtgag ggtgttacct tgctggatcc ggcccggttt gatctgcggg gtgaactcgg
      781 agttggtcgg gatgtggtga ttgatatcaa cgtggtcatc gagggccgag tacgcttggg
      841 aaaccgggtc acgattgggc caaatgccta tatccgggat acggagatgg ctgatgatgt
      901 cactgtcctg ccccattgtg tgatcgaagg ggcggtgatc ggccagggtt cccgcatcgg
      961 ccctttttca cgcgtgcggc ctgggaccct tttggccgag gaggtgcaca tcggcaattt
     1021 cgttgagatc aaaaagtcca aggtgaatcg aggttcgaag atcaatcact taagttatgt
     1081 gggggatgcc gatgtgggaa agaacgtcaa tatcggtgcg ggcacgatca cctgcaatta
     1141 cgatggcgcc aacaagcatc gaaccagtat tggcgatgat gtctttatcg gctcggatac
     1201 tcagttgatc gcaccggtca gagtggggga gggtgctacg attggtgcgg gcacaacagt
     1261 ggcgagtgat gcgccggcgg gtatgctgac cattggacgg acccggcaga cggtgatacc
     1321 gaattggcag aggccgcaga agaagcccta gtatgctgcg gatcggctat tatcaatttc
     1381 ggcctttatt tggtcagatc cggcgtaact tgaaaaaggt ggtgagcgca cttcaagggg
     1441 tcaaggccga tctcatcgta ttgccggaat tggccttcac cggttatcac ttcaaggatc
     1501 gtgaggaggt cttgagcctt tcggaagatc cccaaacctc ggagacggta gcggccctga
     1561 tccgattatg ctatcagcag gatctctatc tggtggcggg gttttcggaa aaacgaaaag
     1621 acaaggtcta taacagcgcc ttgttgatcg gaccccgggg tgtacagtct atctatcgca
     1681 agcttcatct ctttaacaac gagaagcaat gctttgatcc cggggatctg cccctgacgg
     1741 tccaggaggt gcggggtgcc aggcttggac ttatggtctg ttttgactgg gcgttcccgg
     1801 agatcgcccg gatcttagcc ctgcaggggg ctgacatcgt gtgccatccg tccaatctgg
     1861 tgttaggcta ttgtcagcaa gcaatgctga cccgttgcct ggagaataag gtatttgcga
     1921 tcacgaccaa tcggtatggc gccgatagaa ggccgcatgg cgaattgcgc tttaccggcc
     1981 aaagtcagat cgtggcgccc ggtggcagac tcttgaatcg ggccgctgct caacgtgagg
     2041 cgctttatat caccgagatt gatccggttg aggcacgaaa taaagccatt acacccctaa
     2101 acgatctgct ggccgatcgc cggccagact attaccaagc attgatccag aaaatttgaa
     2161 cggctctctg ttgattaagc cccttcgtac catccacagt ttcgttcgcc gagaaggccg
     2221 gatcacgccg gcgcagcgcc aggcgctagc gactttctca gcggactatt gcattgaagc
     2281 ggatgacgca ccgctggatc tcgatactgt atttggacgc catgcgccgc gccaccttga
     2341 gatcggctgt ggtaacgggg aggcattgat ggggctggcg gctcagcatc ctgagaatga
     2401 ttatctggga atagaagtct atcggccggg attaggcagc ctgcttcgtg ggcttgcccg
     2461 ggaaaggttg gagaatgtcc ggatcatcac caacgatgcc gtcgtgacga ttgaatgcct
     2521 aatcgatgat gaagctctgg acctgatcta tatctttttt cctgatcctt ggccgaaaaa
     2581 gcgtcaccat aaacgccgcc tgatccagcc cgagtttgct tcattactga ggaaaaggct
     2641 taagccccac ggtcgcctgt tcatcgcaac tgattgggaa gactacgcgc agcatattct
     2701 tatgacactg gatgaggccg gcttggtgaa cctagcaagc agccaaaata ggtttgcacc
     2761 acggccgagc tggcggcctg tgactcagta tgagaaacgg agtcgtacgc ttgggcatcg
     2821 ggtgagagag ttgatctatg ctaaaggtgg ataaatggag caggacgttt tagaaacgat
     2881 aaaacgcggt acagtcgaga tcctcctcga gagagaactg ct
//
LOCUS       DASQSL010000738         1009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_100958, whole genome shotgun sequence.
ACCESSION   DASQSL010000738 DASQSL010000000
VERSION     DASQSL010000738.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100958"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            27..>1009
                     /locus_tag="VE844_07580"
     CDS             27..>1009
                     /locus_tag="VE844_07580"
                     /inference="COORDINATES: protein motif:HMM:NF019344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZC01210.1"
                     /translation="MPSRVRDLQRQIADIVRQKKEFIEKQEFEKAVELRDKEEDLRRD
                     VEGEKKQWEDLRDDVEPIVTEEDIAYVVSRMTGIPLSKIEESEASKLLRIEDELHRRV
                     VGQDEAIKAIGRAIRRARAGLKDTNRPVGTFIFLGPTGVGKTELARALAEFLFGDEDA
                     LIRIDMSEYMERFALSRLVGAPPGYIGYDEGGQLTERVRRRPYSVVLFDEIEKAHPDV
                     FHILLQVMDDGRLTDSYGRAIDFKNVILIMTSNMGGRTIEKQTALGFQRDSEASAMEK
                     MRENIKQELKRTFNPEFLNRIDEIVMFHPLNLEHIVQIVDIQIERLNKQLI"
BASE COUNT          241 a          248 c          310 g          210 t
ORIGIN      
        1 cacgtgtgcg cctggcgaag gagacgttgc cctctcgtgt ccgtgacttg caacgccaaa
       61 tcgccgatat cgtgcggcaa aagaaggaat tcatcgagaa gcaggagttt gagaaagcgg
      121 tcgagctgcg cgacaaagag gaagacttgc gccgcgatgt ggagggtgag aagaagcagt
      181 gggaggatct gcgggacgat gtcgagccga tcgtgacaga agaggacatc gcctacgtcg
      241 tctcccgtat gaccggcatc ccattgtcaa agatcgaaga aagcgaggcc agcaagctgc
      301 tgcgcattga ggatgagttg caccggcggg tggttggcca ggacgaggcg attaaagcca
      361 tcggtcgagc catccggcgt gcgcgtgcag gtttgaagga taccaatcgc ccggttggca
      421 cgttcatctt cttgggcccc accggcgttg gcaagactga attggcgcgg gcgctggcgg
      481 aatttctctt cggcgatgaa gatgcgctga tccgcattga catgtcggaa tatatggaac
      541 ggtttgcact gtcgcgctta gtgggagccc ctccaggata cattggttac gatgagggcg
      601 gtcaactgac cgagcgtgtg cggcgacggc cctactcagt ggtgctgttc gacgagatcg
      661 agaaagccca ccctgatgtt tttcacatct tgttacaggt gatggatgac ggccggctga
      721 ccgacagtta cgggcgcgcc atcgacttca agaatgtcat cctcatcatg acatccaata
      781 tgggtggacg caccatcgag aagcaaacgg ccctcggctt ccagcgcgat agtgaagcga
      841 gtgccatgga gaagatgcgc gagaatatca agcaggagtt aaagcgcacc ttcaatcctg
      901 aattcttgaa tcgcattgat gaaatcgtga tgttccatcc gttgaacctc gagcacatcg
      961 tgcagattgt tgatattcag atcgagcgtc tcaataagca actcattga
//
LOCUS       DASQSL010000739         1033 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_183207, whole genome shotgun sequence.
ACCESSION   DASQSL010000739 DASQSL010000000
VERSION     DASQSL010000739.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183207"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..477
                     /locus_tag="VE844_07585"
     rRNA            <1..477
                     /locus_tag="VE844_07585"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            683..>1033
                     /locus_tag="VE844_07590"
     rRNA            683..>1033
                     /locus_tag="VE844_07590"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          238 a          279 c          337 g          179 t
ORIGIN      
        1 ctcgtgtcgt gagatgttgg gttaagtccc gcaacgagcg caacccccgt cgcatgttgc
       61 cagcattaag ttggggactc atgcgagact gccggtgaca aaccggagga aggtggggat
      121 gacgtcaagt catcatgccc cttatgtcca gggctacaca cgtgctacat tggcgcgaaa
      181 caaagggacg caataccgcg aggtggagca aatcccataa aacgcgtctc ggttcggatt
      241 ggaggctgaa actcgcctcc atgaaggcgg agttgctagt aatcgtggat cagcaatgcc
      301 acggtgaata cgttcccggg ccttgtacac accgcccgtc acaccacgaa agcgggcaac
      361 acccgaagcc ggtggcctaa cccttacggg agggagccgt cgaaggtggg gctcgtgatt
      421 ggggtgaagt cgtaacaagg tagccgtagc ggaagctgcg gctggatcac ctcctttcta
      481 gggagacatt ccctaatgtc gaccggactt gcgctcgagc tcgtcccgca tggcgggcac
      541 aggctcgggc tttgacgctg ctcagttttg agggaccggg cggggaatcc ccccgcgccg
      601 gcctcggcgg agcttgaaaa ctgcacaacg gccaaataag taagggtatt tgcacacccg
      661 cgcgcaagcg tgggtggctc accgtcaaga taagaagagc acatggcgga tgccttggca
      721 ccaggagccg aagaaggacg tggacggctg cgataagccg cggttaggcg ctgaacagcc
      781 attgacccgc ggatttccga atgggaaaac ccggcgccgg taatgcggcg tcatccgggg
      841 ctgaatacat aggtcccgga aggcaagtgg gcgaactgaa acatctcagt agcccgagga
      901 aaggaaatca accgagactc cccgagtagt ggcgagcgaa aggggatcag cccaaaccag
      961 ccaggtgcaa gcgtgcaggc gttgcctggt tggggttgta ggacgtgctt tccgagctct
     1021 gcatggctcg gcg
//
LOCUS       DASQSL010000740         1353 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_194945, whole genome shotgun sequence.
ACCESSION   DASQSL010000740 DASQSL010000000
VERSION     DASQSL010000740.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1353
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194945"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(126..725)
                     /locus_tag="VE844_07595"
     CDS             complement(126..725)
                     /locus_tag="VE844_07595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012845379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01211.1"
                     /translation="MAAGKRGLKRGLATRKRTVILMLDETIITETPPLYACYGHIGEQ
                     VCVPITGNHARRILHGVLNVQNGEVLLLITEEWVQETHQAFLSMIRSHWRGWHIVLLE
                     DRGSPHTAGESLRLAGELHIKLRFLPKATPELNAMDHLWRHVKGRGLANRATQSIDES
                     ADNACRYILDMSRRERLRKAGVLSGNFWLTKGLFCQRTF"
     gene            complement(662..1201)
                     /locus_tag="VE844_07600"
     CDS             complement(662..1201)
                     /locus_tag="VE844_07600"
                     /inference="COORDINATES: protein motif:HMM:NF024940.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC01212.1"
                     /translation="MTLLTLNLREWKALETVAARTTDAHILRRAQALLWLDEGETVPE
                     VAAQLRVTRQAVYKWVACFRRRSALDMAARLEPGKRSGRPRLVHGVIDPLIMEVVERD
                     PRELGYRSTVWTAPLLRQYLQEVHHLDVSRPSVSLAIDRLGLRWKRPRHGLARRPATW
                     RQAKGGSNGAWRHGSAPLS"
BASE COUNT          303 a          409 c          362 g          279 t
ORIGIN      
        1 ccgtacagat cgtagctccc gactagcgcg cggtcctctt gggtaaggaa gcgccagaag
       61 tagtcgttac tcagattgtc atcagaccag aggtacacca agccggccac actgctaagt
      121 aacttctaaa aagtccgttg acaaaacagt cccttggtga gccaaaaatt gcctgataac
      181 accccagctt ttcgcaagcg ctcgcgacga ctcatgtcga gaatgtaccg acatgcgttg
      241 tccgcggatt catcgatgga ctgtgtggcg cgattggcca atccccgccc cttcacatgc
      301 cgccaaagat ggtccatcgc gttcagctct ggcgttgctt tgggtaagaa gcgcagcttg
      361 atatgcagct ccccagccag gcgcagactc tcgcctgcgg tatgcggcga gccacgatcc
      421 tcgagcaaga caatatgcca gccacgccaa tgcgagcgga tcatactgag gaaggcctga
      481 tgagtttctt ggacccactc ctcggtgatc agcaagagta cctctccgtt ctggacgttg
      541 agcacaccat ggaggatgcg cctagcgtga ttccccgtga tcgggacgca gacttgctcc
      601 ccaatatggc catagcatgc atagagcggt ggagtctcag taataatggt ctcatcgagc
      661 atcaggataa cggtgcgctt ccgtgtcgcc aggccccgtt tgagccccct tttgcctgcc
      721 gccatgtcgc cgggcgacgc gcaaggccat gccgaggccg cttccaccga agacccaaac
      781 gatcgatggc caagctcacg ctgggccggg agacgtcgag atggtgaacc tcctgcagat
      841 attgacgcag cagtggggcc gtccacacgg tcgagcgata gcccaactcg cgcgggtccc
      901 gctcgaccac ctccatgatc aaaggatcaa taaccccatg cacgaggcga ggacggccac
      961 tgcgctttcc tggctcaagg cgagcagcca tgtccaacgc gctgcgcctt cgaaagcagg
     1021 ccacccactt gtatacagcc tggcgtgtga cccgcaactg tgcagctacc tcgggcacgg
     1081 tctccccctc atcgagccac aacaaggcct gggcacgacg aaggatatgg gcatcagtgg
     1141 tgcgagcagc aacagtctcc aaggctttcc attctctgag gttgagtgtc agcaaggtca
     1201 tcggctcacc tcctgtttgg ctggtgatgc gatgactcat tatacttgtc aacgaacttt
     1261 ttagaactta cttagagcct atcataaccg agtcactaac gcttgttacg ctgctgcttt
     1321 acgctataga gcgggtcaat atacagccga ttt
//
LOCUS       DASQSL010000741         1885 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_86205, whole genome shotgun sequence.
ACCESSION   DASQSL010000741 DASQSL010000000
VERSION     DASQSL010000741.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1885)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1885)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1885
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86205"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(411..>1885)
                     /locus_tag="VE844_07605"
     CDS             complement(411..>1885)
                     /locus_tag="VE844_07605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YdiU family protein"
                     /protein_id="HZC01213.1"
                     /translation="KLFDFDNSYARLPERFYRRWMPTPVSRPRLLVFNYALASELGAR
                     SECLDAAQLAEIFAGNRMPEGADLLAMAYAGHQFGHFVPQLGDGRAILLGEVLDKHGV
                     RRDIQLKGCGQTPFSRLADGRAALGPVIREYIVSEAMHALGIRTTRSLAAVTTGETVY
                     RETLLPGAVLTRVAASHIRIGTFEYFAARGDWEAVRRLADYTMDRHYPEAKAAVNPHV
                     ALLGYVLEAQAALVASWMHVGFIHGVMNTDNTALSGETIDYGPCAFIDHYDPRMVFSS
                     IDLQGRYAFGNQPPIAQWNLARLAETLLPLLDCDINKAAGMAEEVISTFPERFRQYWL
                     TGMRKKLGFFTEEETDALLIEQLLSLMHRSGADYTLAFRRLCDAADEKADDAALRQLF
                     TEQQDFSEWMKHWRRRLGHQTQSATERSQAMRRVNPAYIPRNHHIERAIEAAVHHDDF
                     SPIERLLQVLAHPYREQAAFAEYAAPPLPTERVQQTFCGT"
BASE COUNT          421 a          571 c          501 g          392 t
ORIGIN      
        1 tgtataggcc attgtaacca tttgataaca aagcagttat agctaacagt aaatttacct
       61 gccgttacgc ctgcaacccc aattatgcaa cacaatcgaa acgggtggtc cgcccgatgc
      121 cgggatttaa gtcgatggag gcggctcaac gcaccttaac cggtatcgag ctcatgcaca
      181 ggctcaagaa agcacaaatg gtcacgggag agggcacaca gggccagaca cccgcccaac
      241 agttcaacgc cctggccgcc tcatacccac ctcctccagc ctctccacgt cagcgctcaa
      301 aatttgcgac acatccgttt tacttcctcg ccgcttaatc ctcagttcag caaagctctc
      361 tgcgttgttg ctcagaattt gcgacacatc ccacgccagg ctttgccaca tcacgtcccg
      421 caaaacgttt gctgcacgcg ttccgtcggc aaaggcgggg ccgcatattc ggcgaaggcg
      481 gcctgctcgc ggtaagggtg ggcgaggact tggagcaacc gctctatcgg agagaaatcg
      541 tcgtggtgca cggccgcttc gatggcccgt tcgatgtggt ggttgcgagg gatataagcg
      601 gggttgaccc gccgcatcgc ctgcgaacgc tccgtggcgg attgtgtttg atgtccgagc
      661 cgtcgacgcc aatgcttcat ccattcgctg aaatcctgtt gctccgtaaa gagctgccgt
      721 aacgccgcat cgtcggcttt ttcatccgcc gcatcgcaga gccgcctgaa cgccagcgta
      781 taatccgcac cgctacgatg catcaggctc agcaattgct cgatgagaag cgcatcggtt
      841 tcttcttccg taaaaaaacc gagtttcttg cgcataccgg tcagccagta ctgcctgaaa
      901 cgttccggga aggtagaaat cacttcctct gccatgcctg ccgccttgtt gatatcgcaa
      961 tccagcagcg gcagcagcgt ttccgccaga cgcgcgaggt tccattgggc gataggcggt
     1021 tggttgccaa aggcatagcg gccctgaaga tcgatggaac tgaagaccat gcgcggatcg
     1081 taatgatcta tgaacgcgca gggaccgtaa tcgatggttt cgcccgagag cgccgtgtta
     1141 tccgtattca tcacgccatg gataaagccg acatgcatcc agctcgccac cagggcagcc
     1201 tgcgcttcga ggacgtatcc gagcaatgcg acatgaggat tcacggccgc tttggcctcg
     1261 ggataatgac ggtccatcgt ataatcggcc aggcgtcgca ccgcttccca gtcgccgcgc
     1321 gccgcaaaat attcgaacgt cccgatacgt atatggcttg cagccactcg cgttagtacc
     1381 gcaccaggca gcaaagtttc gcggtacacc gtctcaccgg tcgtgacggc agccagtgat
     1441 cgtgtcgttc gaataccaag cgcatgcata gcctcgctga cgatatattc gcgaatcacc
     1501 ggcccgagcg cggctcttcc gtccgccaaa cgcgaaaacg gcgtttgtcc acatccttta
     1561 agttgaatat cccgccgaac gccatgttta tccagcacct ctcccagtag aatggcgcgg
     1621 ccgtcaccga gttgcgggac gaaatgcccg aactgatgtc cggcataggc catggcaagc
     1681 agatcggctc cttcgggcat gcgattaccg gcgaagattt ctgccagctg cgccgcgtcc
     1741 aagcattcgc tgcgtgctcc caattccgaa gcaagcgcat agttaaatac cagaagacgg
     1801 ggcctgctta ccggtgtggg catccaacgg cggtaaaacc tctccggcag gcgcgcataa
     1861 ctattgtcga agtcaaaaag cttta
//
LOCUS       DASQSL010000742         1309 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_194969, whole genome shotgun sequence.
ACCESSION   DASQSL010000742 DASQSL010000000
VERSION     DASQSL010000742.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1309
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194969"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..732)
                     /locus_tag="VE844_07610"
     CDS             complement(<1..732)
                     /locus_tag="VE844_07610"
                     /inference="COORDINATES: protein motif:HMM:NF019228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAzo13 family transposase"
                     /protein_id="HZC01214.1"
                     /translation="MLQDATAGDPITGLKWTRKTLRALARTLRSKGFKIGFVTLRRLL
                     QEQDYAIRVNRKRLTKKQAPQRDRQMRYLPRLRRRFVKAGQPVISVDTKKRELVGNFK
                     NAGGTWRRKARAVLEYDFPSDADAVAIPFGIYDVVRNEGFVVVGTSHQTPEFAVAAIR
                     RWWVQAGQMYYPDPHELLIEADCGNPNGNRCWRWKHELQQLADEFGLTITVTHLPTGA
                     SKWNPIEHRLFSQISRNWAGEPLVSY"
     gene            complement(747..1076)
                     /locus_tag="VE844_07615"
     CDS             complement(747..1076)
                     /locus_tag="VE844_07615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01215.1"
                     /translation="MKRFSKPNVHQCVCRLCQRHPHSAMAKEHQAINRVVAGLDEKNR
                     RRFVGVLALQWGRGGIARLIEITGLSRNTICRGRVEVQQADRATAGRVRCAGAGRPAL
                     EKNSHGS"
BASE COUNT          269 a          392 c          336 g          312 t
ORIGIN      
        1 gtaactgacc aaaggctcgc cggcccagtt gcggctgatc tgcgaaaaca ggcgatgctc
       61 aatcggattc cacttggagg cgccggtggg caaatgggtc acggtgatgg tcaagccaaa
      121 ttcatccgcc aattgctgca gttcgtgctt ccagcgccag caacgattgc cattgggatt
      181 gccgcagtcc gcctcaatca gcagttcatg cgggtcaggg tagtacattt gtccggcctg
      241 cacccaccag cgtctaatgg ctgccaccgc aaactccggg gtttggtgcg aggtccccac
      301 caccacgaac ccttcgttgc gcaccacgtc gtaaatcccg aaaggaatgg ccacagcgtc
      361 agcatcactg ggaaagtcat actccagcac agcgcgagcc ttccgccgcc aagtgccgcc
      421 cgcgttcttg aagttgccga ccagttcgcg ttttttggta tccacgctga tcacgggctg
      481 gccggctttg acgaatcggc ggcgcaaccg gggcagatag cgcatctgtc ggtcacgttg
      541 cggggcttgt ttcttggtca atcgcttacg attgacgcga atcgcataat cctgttcctg
      601 caacaaccga cggagtgtga caaaaccaat tttgaagccc ttggaccgca gggttcgtgc
      661 cagcgcgcgc agcgtcttgc gtgtccattt aaggccagtg atcgggtcgc ctgctgtggc
      721 atcctgcaac aacctctcca gggctttcag gatccgtggc tgtttttttc aagcgcgggg
      781 cgacctgcgc ccgcacagcg cacccgccct gcagtggccc gatccgcctg ctggacttca
      841 acacgcccgc gacagatggt gttgcgactg agccccgtaa tctcgatcaa gcgcgcgatg
      901 ccaccgcgtc cccactgcag tgcaagcact cccacaaagc gccgccggtt cttttcatcc
      961 agacccgcca ccacacgatt gatcgcttgg tgttctttgg ccatggcact atgggggtgt
     1021 cgctgacata gccgacaaac acactgatga acattcggtt tactgaatcg tttcatgcga
     1081 gctcatcccg ttgttcttct gacaacgcat actccacttg tcagtttgac aggtatgagc
     1141 ttttcgtcaa atcgtcaagt tatttttgaa caaagcctaa attgtttcat gcacgctcat
     1201 cccgttgttc ttctgacaac gtacgtatat tcgtatactt cacttgtcag tccgacaggt
     1261 atgagctttt cgtcaaatcg tcaagttatt tttgaacaaa gccttaagt
//
LOCUS       DASQSL010000743         1349 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_6234, whole genome shotgun sequence.
ACCESSION   DASQSL010000743 DASQSL010000000
VERSION     DASQSL010000743.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1349)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1349)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1349
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6234"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..841
                     /locus_tag="VE844_07620"
     CDS             <1..841
                     /locus_tag="VE844_07620"
                     /inference="COORDINATES: protein motif:HMM:NF016693.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tryptophan 7-halogenase"
                     /protein_id="HZC01216.1"
                     /translation="RDTLLAKQFRIKGRNRSHNTAALFGHFAGAKRLAGRDEGNISIC
                     WFEHGWFWMIPLKDGVMSVGAVCNPAYLRSRTTSPEQFLLDTIALCSNVAERLKEARL
                     ISPVTATGNYSYAAKRMTGNNYLIVGDAFAFVDPIFSSGVHLAMNSAVLGSDVVDSHL
                     RGSSDYARTRRAFERAVQHGLKQFSWFIYRATSPATQQLFMAPRNDFRTREALISLLA
                     GDVYNNKIGLPLLLFKGVYYINSLHLFRQSYNAYRMRRSSLVPDSASSEPAADLEKRK
                     ATL"
     gene            852..>1349
                     /locus_tag="VE844_07625"
     CDS             852..>1349
                     /locus_tag="VE844_07625"
                     /inference="COORDINATES: protein motif:HMM:NF044415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01217.1"
                     /translation="MKLPSSAGPSGLDTLQPIPCTVEYIAPGDLLSHYLQAHLGTVLG
                     VVRFSGTQPPSGEVPDIVIPLVQVGNACQTEVWASRLALSYGRSDHLSYAKNDQILFL
                     TYTLDAEGTRNAPLDTLIDAAYDELLQFLHAQAYPHLLRLWNFFPAINADEQQLERYR
                     RFSIGR"
BASE COUNT          277 a          421 c          360 g          291 t
ORIGIN      
        1 acgggatacg ttgctggcaa agcaatttcg gatcaagggg cgcaatcgca gccataacac
       61 cgccgccctc tttgggcact ttgcgggcgc caagcgcttg gccggccgtg acgagggaaa
      121 tatcagcatc tgctggttcg agcacggctg gttctggatg atcccgttaa aggacggcgt
      181 aatgagcgtt ggcgcggtgt gcaaccccgc ttatctcaga tccagaacca cctcaccgga
      241 gcagttttta ttagacacga tcgccctttg ttccaatgtc gccgagcgcc tcaaagaggc
      301 aaggctcatc tcgccggtca ccgcaaccgg caattattcc tacgcggcca agcgcatgac
      361 cggcaataat tacctcattg tcggcgatgc ctttgcattt gtggatccca tcttctcgag
      421 cggcgtacat ctggcgatga atagcgccgt gctcggatcg gacgtggtgg actcgcactt
      481 gcgaggttcg agcgactatg cgcgcacccg gcgcgcattc gagcgggctg tgcagcatgg
      541 cctcaagcaa ttcagctggt tcatctaccg agcgacttcg ccggccactc aacagctatt
      601 catggcgccc cgcaacgatt ttcgtacgcg tgaagcgctg atctccctgc tcgcgggcga
      661 tgtatataat aataagatag gtttaccgtt gctgctcttt aagggtgtct attacatcaa
      721 cagcctgcat ctcttcagac agagctataa cgcttaccga atgcgccgat cctccctcgt
      781 gcccgattcg gcaagctcag agccggccgc tgatcttgaa aagcgcaaag cgacgctgtg
      841 atccgggtgt gatgaaacta ccgtcttcgg caggaccctc ggggctcgac acgctgcagc
      901 cgatcccctg cacggtggaa tatatcgcgc caggcgacct cctctcccat tacctccagg
      961 cccatctcgg tacggtattg ggcgtggtgc gcttcagcgg cacacagccc ccctcaggtg
     1021 aggtccccga catcgttata ccgcttgtcc aggttggaaa cgcttgccag accgaggtct
     1081 gggcaagccg cctagccctc agctacgggc gaagcgacca cttgagctat gccaaaaacg
     1141 atcagatcct cttcctcacc tacaccctgg atgcggaggg aacccgtaac gctccgctag
     1201 ataccctaat cgatgcagcc tacgacgagc tgttacaatt cctgcatgca caggcttatc
     1261 ctcacctgct gcggctgtgg aatttcttcc cggcgattaa cgccgatgag cagcagcttg
     1321 aacgctaccg ccgcttctcc atcggccgt
//
LOCUS       DASQSL010000744         3997 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_74344, whole genome shotgun sequence.
ACCESSION   DASQSL010000744 DASQSL010000000
VERSION     DASQSL010000744.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3997
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74344"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..183
                     /locus_tag="VE844_07630"
     CDS             <1..183
                     /locus_tag="VE844_07630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002811248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HZC01218.1"
                     /translation="FHSVNPLMGSIERLLAPLSRLIGFHPDLCLEAFIEETGLEVIET
                     SPTNLLGYWKLVRAQP"
     gene            453..932
                     /gene="rpsF"
                     /locus_tag="VE844_07635"
     CDS             453..932
                     /gene="rpsF"
                     /locus_tag="VE844_07635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016352957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HZC01219.1"
                     /translation="MRHYEIVFLVHPDQSEQVRAMVDRYRTMIESGGGVIHRLEDWGR
                     RQLAYPINKVHKAHYVLMNIECSAQILNELTNAFRFNDAVIRNLVIKRDEAITEPSLL
                     AKSAEDERKQETHQADLLSGEDNLSSETDKGREIEDQQAQDLNVEDLGQVKGAPAIE"
     gene            960..1184
                     /gene="rpsR"
                     /locus_tag="VE844_07640"
     CDS             960..1184
                     /gene="rpsR"
                     /locus_tag="VE844_07640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013034401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HZC01220.1"
                     /translation="MARFFRRKRYCKFTAEGIKEIDYKDLNILKPYITETGKIIPSRF
                     SGTKVRYQRQLSKAIKRARFIALLPYCDSH"
     gene            1294..2175
                     /locus_tag="VE844_07645"
     CDS             1294..2175
                     /locus_tag="VE844_07645"
                     /inference="COORDINATES: protein motif:HMM:NF021506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2232 domain-containing protein"
                     /protein_id="HZC01221.1"
                     /translation="MAGLCGMLSWIFPPLSYLSGATVALVTLRLGAREGIIIVLGTAV
                     VVVLVALLGIRNPIPALALILAIWLPVWLCAQILRLTRSQGMMLVAIGILAGLFAISL
                     RGLMGDVHAWWRAWLGNVLEHSPIQDTQVLTPAMLDQAALMMNGLMAAAISLSLIMTL
                     LIARWWQAIVYNPGGFQTEFQALRLPRLLAIPMLVALLLVTIQWPKGSGYGLIMDLVF
                     VASTLYVFQGLAVIHHRIRVHNQSTAWLVALYLLVFLLPHYMYLLLVMTGLMDSFIDF
                     RGLERSAKDAHDQSSNL"
     gene            2197..2643
                     /gene="rplI"
                     /locus_tag="VE844_07650"
     CDS             2197..2643
                     /gene="rplI"
                     /locus_tag="VE844_07650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011395633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HZC01222.1"
                     /translation="MEVILLEKVHQLGSLGDRVKVRPGYGRNYLIPMGKAVPATAQNV
                     AKFEVVRAEFERTQAETLEQAKAKAAALGTLMVTIASKAGTEGRLYGSVGTADIASAV
                     TAGGVTIAKSEVRLPQGPLREVGEHVVNLHLHADVDVMIKVIIIPE"
     gene            2720..>3997
                     /gene="dnaB"
                     /locus_tag="VE844_07655"
     CDS             2720..>3997
                     /gene="dnaB"
                     /locus_tag="VE844_07655"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019021778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HZC01223.1"
                     /translation="MEELAYSPDKVTGTLRIPPHSIEAEQSVLGGLMLDNEAWDPVAD
                     RVSEQDFYRSDHRLIFRAIAALANEGKPYDIVTLSEWLAANNLLEKAGGLVYLALLAE
                     TTPSAANIAAYADIVRERSVLRQLIRVGTEIGNSAYHTEGRTSEQLLDQAEQLVFEIA
                     DQQARERRGFKPIKELLTKALARIDTLFQQDSPITGVATGFTDFDQLTAGLQPSDLII
                     VAGRPSMGKTAFAMNIAEQATIKEGHVIAIFSMEMPGEQVAMRLMSSLGRIDQHKIRT
                     GKLSDDDWPRLTSAIGILSSAKMFIDDTPALTPGELRARCRRIAREHSLGLVIIDYLQ
                     LMQVPGTKENRATEISEISRSLKSLAKELNVPIVALSQLNRSLEQREDKRPRMADLRE
                     CVTGDTLVVLADGCRVPISQLIGKTSEVLAMDAN"
BASE COUNT          898 a         1004 c         1175 g          920 t
ORIGIN      
        1 ttccacagcg taaatccctt gatgggcagt atagagcgcc tgctcgcacc gctttcgaga
       61 ttgatcgggt ttcatcctga tctgtgtctc gaagccttta tcgaggagac cggtcttgag
      121 gtgattgaga ccagcccgac caatctgttg ggttattgga aactggtgcg cgcgcaacca
      181 taagcaggcg ataggctgca agaaggaagc cgtccccagg cgaagtcagg ccttgccgag
      241 gcaatgtttt gcaatcaatt tgcaacatcg ggttcggtga catacaataa aaaccccttc
      301 tggcttgggt attctcctaa actctcgata ggctctgtaa accgattatt caagctggat
      361 ccaataaaat tttaagcgtt ctccttgcct taccgccgat ctactgcatc tgcaggtcgg
      421 aaggctttaa ttatccgaga ggagtttttt agatgcgcca ttatgagatt gtatttttag
      481 tccatcccga tcaaagcgag caggtacggg ctatggttga ccggtaccgc acgatgatcg
      541 aatcgggggg cggtgttatc catcgacttg aggattgggg acggcgccaa ttggcttatc
      601 ctatcaacaa ggtccataag gcccattatg tgctcatgaa catcgaatgc agtgcccaga
      661 tcttaaatga gcttaccaat gccttccgtt ttaacgatgc ggtcatacgc aatttggtga
      721 tcaagcgtga tgaggcgatc acagagccct cgctcttggc caaatccgct gaggatgaaa
      781 ggaaacagga aactcatcag gctgatctgc tgagcggtga ggacaatctc tcttccgaga
      841 cagataaagg gagagaaata gaggaccagc aagcacaaga cttgaacgta gaagatctcg
      901 ggcaggtaaa aggggcgcct gccatcgagt gatctctgtt aaagacgagg acggttttta
      961 tggcacgatt ctttagacgc aagcgctatt gtaagtttac tgcggagggg ataaaggaga
     1021 ttgattataa ggatctcaat atcctcaagc cttatattac ggaaacgggc aagatcatac
     1081 ccagccggtt ttccggcacc aaggtgcgct atcagcggca attgtcaaaa gctataaaac
     1141 gggcccgttt tatagcgctc ttgccttact gcgattcgca ttgaagccac tttaagaagc
     1201 agcccctcct aaaggcgagc ggccggtggg aaggtaggtc agatgcggtc gttcgctgaa
     1261 tacataatgc ggggccgcct tcaggcaaca agcgtggcag gactgtgtgg gatgctgagc
     1321 tggatctttc cgcctttatc ctacctgagc ggcgccaccg tggccctggt tactctaagg
     1381 ctgggcgcgc gcgaaggcat tattatcgtc ctaggcacgg ctgtggtggt agttcttgtc
     1441 gcccttttag ggatcaggaa ccccataccc gccttagcgc tgatcctggc gatctggttg
     1501 ccggtctggc tatgcgctca gatcctgcgc ctcacacgct cgcaagggat gatgttagtg
     1561 gctataggta tacttgccgg actgtttgcg atcagcctgc ggggtctcat gggcgatgta
     1621 catgcctggt ggcgagcgtg gctcggtaac gtcttagagc atagcccgat ccaagacact
     1681 caggtcctaa ctccagccat gttggatcag gcggccctga tgatgaatgg cctgatggcg
     1741 gcagccatca gtctaagttt gatcatgacc ctgctgatcg cgcgttggtg gcaggcgatc
     1801 gtgtataacc cgggcggatt tcagacagag tttcaggcct tgagactgcc gcgtttattg
     1861 gccatcccta tgcttgtggc cctgttactg gtgactattc aatggccaaa gggcagcggc
     1921 tacggtctta tcatggactt ggtgtttgtg gccagtaccc tgtatgtgtt ccaggggctg
     1981 gcggttatcc accatcggat ccgtgtccat aatcaatcca ccgcatggtt ggtggcttta
     2041 tatctcctcg tgtttttgct accccattac atgtatctgt tgctcgtgat gactggcctt
     2101 atggatagtt tcatcgactt tcgcggtctt gagcgttcgg ccaaggatgc tcatgatcaa
     2161 tcgtcgaatc tttaactaga gaggtgaggt aagtcaatgg aagtgattct gctggaaaag
     2221 gtccatcagc ttggcagtct gggtgacagg gtcaaggtca ggcccggtta cgggagaaat
     2281 tacctgatcc cgatgggcaa ggcggtaccg gccacggcgc aaaatgtggc caagtttgaa
     2341 gtggtgcgcg ccgagtttga acgcactcaa gccgagaccc tggaacaggc caaggccaag
     2401 gcagcggcgc tcggcacact tatggtgact atagcgagta aagccggcac ggaaggccgg
     2461 ttgtatggtt ccgtgggaac ggccgatatc gcttcggcgg tgactgctgg cggggtaacg
     2521 atagccaaga gcgaggtgcg tctgccgcag ggacctttgc gagaggtggg cgaacacgtt
     2581 gtgaacctgc atctgcatgc cgatgtagat gtgatgatca aggtaataat aatcccggaa
     2641 taagaacgcg ggacccggtg ctggctttta gagcggattg ctctacggta ggtgagggat
     2701 gaggttatac gggggatgaa tggaagaact ggcctacagt ccggataaag tcaccgggac
     2761 gttgcggatc ccaccccatt ctatagaggc cgaacagtcg gtgctcggtg gacttatgct
     2821 tgacaacgaa gcctgggatc cagtagccga ccgcgtctcc gagcaggatt tttaccgctc
     2881 cgatcatcgc ctgatcttcc gggccatagc cgcgctcgcc aatgagggaa agccctatga
     2941 tatagttacc ctgtctgaat ggctggcggc caataacctg ctggaaaagg cgggcgggct
     3001 cgtctatctg gcgctgctcg ccgagacgac cccgagtgcc gcaaacatcg ctgcctacgc
     3061 cgatatcgtg cgggaacgct cggtgctgcg ccagctgatc cgcgtcggca ccgagatcgg
     3121 taatagcgct taccacaccg aagggcgtac cagcgagcag ttgcttgacc aggcggaaca
     3181 gctggtattc gagatcgccg atcagcaggc gcgcgaacgg cgtggattta agcccatcaa
     3241 agaactgctt accaaggcgc tggctcgcat tgatacgctg ttccagcaag acagcccgat
     3301 caccggcgtg gccacgggat ttactgattt tgatcaactg actgcgggct tacagccctc
     3361 agacctcatt atcgtggctg ggcgtccgtc gatgggcaaa accgccttcg ctatgaatat
     3421 cgccgaacag gcgaccatta aagagggcca tgtgatcgct atcttcagca tggagatgcc
     3481 aggggaacaa gtggcgatgc ggctgatgtc ctcgctcggc cggatcgatc aacacaagat
     3541 ccgtaccggc aagctgagcg atgatgactg gccgcgtttg acctcggcga tcgggatcct
     3601 atcctcggcc aagatgttta tcgacgatac gccggcgttg acgccgggcg agttgcgggc
     3661 ccggtgtcgc cggatcgcgc gcgagcatag cctggggctg gtgatcatcg attatttgca
     3721 gctcatgcag gtgccgggca ctaaagaaaa ccgggctacc gagatctcgg agatctcacg
     3781 gtcgcttaaa tcccttgcca aggaactcaa tgttccaatc gttgcgctgt cgcagctcaa
     3841 tcgcagcctc gagcagcgtg aagacaaacg cccgaggatg gcggatttgc gggagtgtgt
     3901 aacgggtgac actttagtgg ttttggctga tgggtgccgg gtgccgataa gccaactcat
     3961 tggaaaaacc tccgaagttc tggcaatgga tgcgaat
//
LOCUS       DASQSL010000745         1480 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_156834, whole genome shotgun sequence.
ACCESSION   DASQSL010000745 DASQSL010000000
VERSION     DASQSL010000745.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1480)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1480)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1480
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156834"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            57..341
                     /locus_tag="VE844_07660"
     CDS             57..341
                     /locus_tag="VE844_07660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01224.1"
                     /translation="MAAVPCDFYGVEEDKVTIEVDERFLREHQLFDFEGERYIILSVA
                     WTKDGPKANVMPYWEYNSLHDKSRRGMTVATEAEAEPPIVREIDRRRRTS"
     gene            338..>1480
                     /locus_tag="VE844_07665"
     CDS             338..>1480
                     /locus_tag="VE844_07665"
                     /inference="COORDINATES: protein motif:HMM:NF014750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016625 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, iron-sulfur
                     protein as acceptor [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde ferredoxin oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HZC01225.1"
                     /translation="MNGYGGRILSVDLSTGSSRIEAVDERFARLYLGGNGFAARLLYD
                     RLQPGIDAFEPSNCVILAVGPVTDSNIPGNSRICVASKSPLTGLFFDSTFGGRFPCTF
                     KRTGFDALVITGQAPRPVYLLLTPEGARIKPADELWGTLTQECVDRLHSIEGDDADVT
                     CIGPAGERLVRFAAMAHYWKNRGAIAGRGGIGAVLGSKRLKAIVASGNRKMSLADQAA
                     LNALYKSTYSGMLTGTKALSTFGTAVLVNPINTMGALGTKNLAAEVFEEAEAISGERF
                     KELYWERDTTCLKCPVACGKDFKVEQGEFAGTRWKMPEYESIFALGSMLENANAPSLI
                     KANELCDQLGMDTISMGVTLAFATECAARGLLGPQEMRRELRWGDYH"
BASE COUNT          307 a          408 c          461 g          304 t
ORIGIN      
        1 attcgatatg cttcagtacg tttcagggcc gaaccaagat gtgagaggtg agggccatgg
       61 ctgctgtccc gtgtgatttc tatggtgttg aagaggataa agtcacgatt gaggtcgacg
      121 agcgtttttt gcgcgaacat caattgtttg atttcgaagg tgagcgctac atcatcctct
      181 cagtagcgtg gacgaaagat gggccgaaag cgaacgtcat gccctattgg gaatacaatt
      241 cactacatga taagtcgcgc cgcggcatga cggtggcgac tgaagctgag gcagagcccc
      301 ccatagtacg cgagatcgat cgacgtcgga ggacctcatg aacggttatg gcggacgcat
      361 cctatcagtt gacctctcga ctgggtcgag tcggatcgag gctgtcgacg aacgcttcgc
      421 gcgcctgtat ctggggggca atgggtttgc cgccagattg ctgtatgatc gactgcagcc
      481 agggatcgac gcctttgagc cgagcaattg cgtgatcctg gccgtcgggc cggtgacgga
      541 ttccaacatc cctgggaata gccgcatctg cgtggcctct aagtcaccac tgactggact
      601 cttcttcgac tcgacgttcg gcggtcgttt tccctgcacg tttaaacgga ccggtttcga
      661 tgccctagtg attaccggtc aagccccaag gcccgtctac ctgttactca cccctgaggg
      721 ggcccggatc aaacccgccg acgagttatg gggcacgctg acccaagagt gtgtcgaccg
      781 ccttcacagt atcgagggag atgatgcgga cgtcacctgt atcggtcccg caggggaacg
      841 tctcgtccgc tttgcggcca tggcacatta ttggaagaat cgcggcgcca tcgccggccg
      901 cggtggcatc ggcgccgtgc tgggttcgaa gcgcctcaag gccatcgtgg ccagcggcaa
      961 tcgcaagatg agcctggccg atcaggccgc gctcaacgcc ctgtataaat cgacctatag
     1021 cgggatgctc acggggacca aggcgctcag cacattcggc acggcagtgc tggtcaatcc
     1081 catcaacacc atgggggcgc ttgggaccaa gaatctcgcc gcggaggtct tcgaggaggc
     1141 ggaagccatc agcggcgagc gctttaagga gctgtactgg gagcgcgata cgacttgcct
     1201 caaatgcccc gtggcttgcg gcaaagattt taaggtcgaa cagggagagt tcgccggtac
     1261 gcgctggaag atgccggagt acgaaagcat ttttgcgctc gggtcgatgc tggaaaacgc
     1321 caatgccccg tcccttatta aggcgaacga actgtgcgac cagctcggca tggacaccat
     1381 ctctatgggg gtgactctcg ccttcgccac ggagtgtgcg gcacgcggcc ttttgggccc
     1441 ccaagagatg aggcgagagc tgcgctgggg agactaccat
//
LOCUS       DASQSL010000746         1466 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_74361, whole genome shotgun sequence.
ACCESSION   DASQSL010000746 DASQSL010000000
VERSION     DASQSL010000746.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1466
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74361"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..205
                     /locus_tag="VE844_07670"
     CDS             <1..205
                     /locus_tag="VE844_07670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017745015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="N-acyl-D-glucosamine 2-epimerase"
                     /protein_id="HZC01226.1"
                     /translation="YFRPYPDGFKRNILRVSPDILPPGSIHLSEVWVNGEKYSRFDAE
                     NLTVRVPDSKEAVQIKVRIEPKQ"
     gene            complement(222..749)
                     /locus_tag="VE844_07675"
     CDS             complement(222..749)
                     /locus_tag="VE844_07675"
                     /inference="COORDINATES: protein motif:HMM:NF024752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC01227.1"
                     /translation="MARLPPFGHDGTERRIRRPQDPTEQTRCDRGKKKCHAVKNVRLI
                     NAALAIVFLSEPHAGSTHDQRIADLTPYPLPAGSRLLQDLGFLALTLNQVEVIMPTRK
                     PRGRPLTRGQKAVNRRIARRRVRIEHVNSSVKRCHIVHDTCRLWKTGVRDLVMEVCCA
                     LHNFRVRLTPWQPMV"
     gene            complement(635..1228)
                     /locus_tag="VE844_07680"
     CDS             complement(635..1228)
                     /locus_tag="VE844_07680"
                     /inference="COORDINATES: protein motif:HMM:NF025000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC01228.1"
                     /translation="MGSLRFADIQARPTEVLDLTSLTVDEFQRLVPPFEAAFQAHMAD
                     WRLDGQPRTARRYTTYQNCPLPTAEDRLLFILVYLKTYPLQVVQGRLFGMGQSKAHQW
                     IHALLGVLQVALRGLGDAPTRSLTELAKRLGVTEADASTMVVSGPAPVNLSDPPAMAP
                     SPASPLSGMMARSGASGAPRIRLSRRAVIAARKSATR"
     gene            complement(1263..>1466)
                     /locus_tag="VE844_07685"
     CDS             complement(1263..>1466)
                     /locus_tag="VE844_07685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZC01229.1"
                     /translation="LSVENQFLFDSLYQSLFETLKALVTTLEARDPYTGAHSQRVSRY
                     ATALAARMGCSKEEQDIRVYLDL"
BASE COUNT          312 a          420 c          433 g          301 t
ORIGIN      
        1 gtacttcagg ccttatccgg atggcttcaa gcgtaatatc ctgcgagtat cgccagatat
       61 cctgccgcct ggcagcatac atctgagtga ggtgtgggtc aacggggaga agtattcgcg
      121 ttttgatgcg gaaaacctta cagtaagagt tccggatagc aaagaagctg tgcaaattaa
      181 ggtgcgcatc gagcccaaac agtaattaga gttcattccg attaaaccat tggttgccat
      241 ggagtcaaac gcacacgaaa gttatgcaac gcacagcaga cttccatcac caaatcgcgg
      301 acgcccgtct tccaaagccg gcaggtgtcg tggacaatat ggcagcgctt gacgctgctg
      361 ttgacatgct cgatgcgcac ccgccggcgg gcgatgcgcc gattcaccgc tttctgcccg
      421 cgcgtgaggg gtcggcctcg cggctttcgc gtgggcatga tgacctcgac ctggttgagc
      481 gtcaacgcca ggaagcccag atcctggagc aaccgactgc ctgccggtaa aggatatgga
      541 gtgagatcgg caatccgctg gtcgtgggta ctacccgcgt ggggctcact caagaagacg
      601 attgccagcg cggcgttgat cagccgcacg tttttcaccg cgtggcactt tttcttgccg
      661 cgatcacagc gcgtctgctc agtcggatcc tgggggcgcc tgatgcgccg ctccgtgcca
      721 tcatgcccga aaggggggag gcgggcgatg gggccatggc gggcgggtcg gacaggttca
      781 ccggcgctgg ccccgacacg accatcgtgc tcgcgtccgc ctcggtcacc ccgaggcgct
      841 tcgccagttc tgtcaatgac cgggtgggcg catcccccag cccgcgcagc gccacctgca
      901 agacgcctaa cagggcatga atccactgat gagccttgct ctggcccatg ccgaacagtc
      961 gtccttgcac cacttggagg gggtaggttt tcaggtagac gaggataaac agcaaccgat
     1021 cctcggcggt gggcagtgga cagttctggt aggtcgtata tcggcgagcg gtgcgcggct
     1081 gcccatcgag acgccagtcg gccatatgag cctggaaggc cgcctcaaag ggcgggacca
     1141 agcgctgaaa ctcatccact gtgagactgg tcaaatccag cacctccgtg gggcgggcct
     1201 ggatgtcggc gaagcgtaaa cttcccatgg ctgtgcctcc ttactgtcgg aggcacagga
     1261 tatcacaaat cgagataaac tctaatgtct tgctcttcct tgctacatcc catccttgct
     1321 gccagagctg tagcataccg gctgacacgt tgagagtgag cccctgtata agggtctcta
     1381 gcctctaaag ttgttacgag cgcttttaac gtctcaaaaa ggctctgata cagactatcg
     1441 aaaaggaatt ggttctcaac actcaa
//
LOCUS       DASQSL010000747         1123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_194993, whole genome shotgun sequence.
ACCESSION   DASQSL010000747 DASQSL010000000
VERSION     DASQSL010000747.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194993"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..204
                     /locus_tag="VE844_07690"
     CDS             <1..204
                     /locus_tag="VE844_07690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011285887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HZC01230.1"
                     /translation="MYLSDIYTISLNLAGLPGMSIPAGFIDGLPVGLQIIGNYFSEAR
                     LLNVAHRFQQTTDWHRHEPPGIE"
     gene            224..>1123
                     /gene="gatB"
                     /locus_tag="VE844_07695"
     CDS             224..>1123
                     /gene="gatB"
                     /locus_tag="VE844_07695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012637102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HZC01231.1"
                     /translation="MEWEPVIGLEIHAQLMSKSKIFSGAPTAYGALPNTQACAIDLGF
                     PGVLPVLNKEAVRMAVKFGLAINAKINHRSVFARKNYFYPDLPKGYQISQYELPIVGR
                     GHTEIAIEAEQTKTIGITRAHLEEDAGKSLHDDFHGLSGIDLNRAGTPLLEIVSEPDL
                     RSAKEAVAYMRKIHSLVRYLEICDGNMQEGSLRCDANVSVRPKGETRLGTRAELKNLN
                     SFRFLEKAINYEIARQIEILEAGRTIVQETRLYDADNNETRSMRSKEEANDYRYFPDP
                     DLLPLELSETFIEEVQKTLPELPE"
BASE COUNT          272 a          323 c          310 g          218 t
ORIGIN      
        1 atgtatctgt cggatatcta caccatctct ttaaatctgg ccgggctgcc gggcatgtcc
       61 atacctgcgg gcttcatcga cggcttgccg gtggggctgc agatcatcgg caactatttc
      121 agtgaggcga gactattaaa cgtagctcac cgctttcagc agacgaccga ttggcaccgc
      181 catgaacccc cagggatcga atgaagtaaa aggagagaac aagatggaat gggaacccgt
      241 gatcgggctt gagatccacg cccaactcat gagcaaaagc aagatcttct caggcgcccc
      301 aaccgcctat ggagcgctgc ccaataccca ggcctgcgcc atcgatctgg gcttcccggg
      361 cgttcttccg gtgctgaaca aggaagctgt gcgcatggca gtcaagtttg gcttggcgat
      421 caacgcgaag atcaaccacc gctccgtgtt tgcccgcaag aactattttt atcccgatct
      481 ccccaaaggt tatcagatca gccaatatga gctacccatc gtgggccgag gccataccga
      541 gatcgcgatc gaagctgaac agaccaagac cataggcatc acccgtgccc atttagagga
      601 ggatgcgggc aaatcgctcc atgatgactt ccatgggctg tccgggatcg acctcaatcg
      661 ggccggcacg ccattgctcg agatcgtctc cgaaccggac ctgcgctcgg ccaaagaggc
      721 ggtcgcctac atgcggaaga tccatagcct ggtgcgctat cttgagatct gcgatggcaa
      781 catgcaggaa ggctcactac gttgtgatgc caatgtctcg gtgcgcccca aaggggagac
      841 tcggctgggc acccgcgccg agcttaagaa cctaaactcc ttccgtttct tagagaaagc
      901 gatcaattat gagatcgcac gccagatcga gatcctcgaa gcggggagga cgatcgtgca
      961 ggagacccgg ctttatgacg ctgacaacaa cgagacgcgc tcgatgcgca gcaaagaaga
     1021 ggcgaacgat taccgctatt tcccggatcc cgatctgctg cctttggaac tgagcgagac
     1081 gttcattgag gaggtacaga agaccctccc ggaactgccc gag
//
LOCUS       DASQSL010000748         1235 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_20036, whole genome shotgun sequence.
ACCESSION   DASQSL010000748 DASQSL010000000
VERSION     DASQSL010000748.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20036"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..981)
                     /locus_tag="VE844_07700"
     CDS             complement(<1..981)
                     /locus_tag="VE844_07700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP oxidoreductase"
                     /protein_id="HZC01232.1"
                     /translation="MNQLGSEQNPLRVAIVGSGPSAFYATEALIKSGHTVRIDMFERL
                     PAPFGLVRNGVAPDHPKLKQPILIYDKIARSPTFTFLGNVAVGHDIRVAELQSAYHAV
                     IFACGAETDRKLGIAGEDLPGSYTATEFVGWYNGHPDYRDRVFDLSQEVAVIIGQGNV
                     AADVCRILSKTVDELKHTDIAEHALAVLAESKICEIHVIGRRGPAQAKFTNKELRELG
                     ELADCDAVVDPADLCLNRESELELADKANFINANNVEIFKTWASRPASGKRRRCYFRF
                     LESPVMLLGQSHLERLVLERNRLEGEPNRQVAKGTGQKCELSCGLLFRSVG"
     gene            complement(991..>1235)
                     /locus_tag="VE844_07705"
     CDS             complement(991..>1235)
                     /locus_tag="VE844_07705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006969199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HZC01233.1"
                     /translation="PVNCFHGDDEMLYIDPDVCIDCSACIPTCPVQAIYEGDDIPEDK
                     QHWIAINAERAPNLPVIDEKQTPLPTAEDRKAALGF"
BASE COUNT          249 a          364 c          368 g          254 t
ORIGIN      
        1 gccgacactg cgaaatagaa gaccacagga cagctcgcat ttttgccccg tgcccttggc
       61 cacctgccga ttcggttcgc cttcgagccg gttgcgctcg agcaccaggc gctcgagatg
      121 ggattgaccg aggagcataa cggggctctc caggaaccga aaataacagc gccggcgttt
      181 gcccgaggct ggtcgcgagg cccaggtctt gaagatctcg acgttattgg cattgatgaa
      241 attggccttg tcagcaagct caagctcact ctcgcggttt aagcacagat cggcggggtc
      301 gaccacggcg tcacagtcgg ccaactcacc gagttcgcgc aactccttgt tggtaaattt
      361 cgcctgggcc ggtccacgtc gcccaatcac atggatctcg cagatcttgc tctcggcgag
      421 caccgccaag gcatgctcgg caatatcggt gtgcttgagc tcgtcgacgg tcttggagag
      481 gatgcggcag acatccgccg ccacattgcc ttgaccgatg atgacggcta cctcctgcga
      541 cagatcgaag acccgatccc ggtaatcggg atggccattg taccagccca caaactcggt
      601 cgccgtgtag ctccccggca gatcctcgcc ggcaatgccc aatttccggt cagtctccgc
      661 accgcaggcg aagatcaccg catggtaggc ggactggagt tccgcaacac ggatgtcgtg
      721 tcccacggcc acattgccga ggaaggtaaa tgtcggggaa cgggctatct tatcgtagat
      781 caatatgggc tgcttgagct tcggatgatc gggggcgacc ccattgcgca ccagtccaaa
      841 gggggcagga agccgttcga acatgtcgat ccgcacggtg tgccccgatt taatgagggc
      901 ctcggtggca tagaaagcgc tcggtccgct accgacgatg gccacccgca ggggattttg
      961 ctctgatcct agctggttca tagcgtaaac ttaaaatccc aaggccgctt ttcggtcctc
     1021 agccgtaggg aggggcgttt gcttttcgtc gatgaccgga aggttcggcg cacgctcggc
     1081 attgatcgcg atccagtgct gcttgtcctc ggggatatca tcgccctcat agatggcctg
     1141 cactggacag gtcgggatgc aggcgctgca atcgatgcat acatcggggt cgatatagag
     1201 catctcgtcg tcgccgtgga agcaattcac cgggc
//
LOCUS       DASQSL010000749         1065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_143141, whole genome shotgun sequence.
ACCESSION   DASQSL010000749 DASQSL010000000
VERSION     DASQSL010000749.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143141"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            497..667
                     /locus_tag="VE844_07710"
     CDS             497..667
                     /locus_tag="VE844_07710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01234.1"
                     /translation="MGGPAAIVVPESASGLDGWPLRRELRRAFSGQVGVKPVNQLLGQ
                     RRRHWRQHHNNS"
     gene            complement(850..>1065)
                     /locus_tag="VE844_07715"
     CDS             complement(850..>1065)
                     /locus_tag="VE844_07715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01235.1"
                     /translation="PTQGREDTPTQQPPTVPRGEEVPTQEREDTAVQPPPAASRTGGF
                     DPLLLIGLLVIVAAVGVLGWAVRRRFS"
BASE COUNT          217 a          307 c          313 g          228 t
ORIGIN      
        1 tgtgcccgta aagttctgtg cctccccggt ggcgcatcca caccaccaac gacctcgagc
       61 tcctcaaccg ggataaagcg ccgtgcgcag gtggtgagga tcttccctag ccgaggggcg
      121 tgtccgaggc tggttacggc tctagccgtc gaacactccc aagggtgggt tatgggcaga
      181 cgctagctgg acacgcgggg ctaaagctgc tcgcttcagt caaagagagc tggcctctga
      241 tggctccgtg agggaattcc ttgttgtgga cgtcaacgta gtagctttgt ggtttctcca
      301 gaaggtctct aagcagcgca gggttgacat cggtacatcc gctagaggtg cgatcctcgg
      361 gaggtgggtc tagtttcacg acaatagggc cgcgctctga agcggttccc tcgtggatat
      421 gagctttggt ggcgggctcg atgtcggagg cttcaagtga atagcagagc ctatcctccg
      481 aagtaatgag aacaacgtgg gcggtcccgc tgccatcgtc gtccccgagt cggcctccgg
      541 gttggacggc tggccccttc gtcgtgaact tagacgcgcc ttttccggtc aggtcggcgt
      601 caagcccgtg aatcagttgt tgggccagcg ccgaagacac tggcgtcagc accacaataa
      661 cagttgacac agcaaggact aaacgcaacc gtctcattgt tgatacccac ccttatcttc
      721 acgcccttcg cgttctatct acccaaaatc ttctataagc ctaaccaccg cgtgccgagt
      781 agttgaaaag ccgtaacctc ctgcgaaacc cccaaacgtc ccaggaggtg catgccattc
      841 tctctcactt tatgaaaagc gtcgcctgac ggcccatccc aagacgccca cggcggctac
      901 tatcacaagc aggccgatca gaagaagtgg gtcaaagcca ccggttctag aagcagcggg
      961 aggtggttga acggcggtat cttcgcgctc ctgggtagga acttcctcgc ctctaggaac
     1021 cgtaggcggt tgttgggtgg gagtgtcttc gcgcccctgg gtagg
//
LOCUS       DASQSL010000750         1584 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_128167, whole genome shotgun sequence.
ACCESSION   DASQSL010000750 DASQSL010000000
VERSION     DASQSL010000750.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128167"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(355..903)
                     /locus_tag="VE844_07720"
     CDS             complement(355..903)
                     /locus_tag="VE844_07720"
                     /inference="COORDINATES: protein motif:HMM:NF024252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZC01236.1"
                     /translation="MNGSRTGERLQSIRRLRMWTQGRLAEEAGLSPTTVSGIETGRIA
                     RPHFGTLQRLARALDVDPYLLLSSSEELSKPEGPALLSLQWARSAEEEKFEREIEEAS
                     LDRLKSLAWELNEERERLQRLYGEFPEGSEQRRFIKGQIREVSAQSGSITTSMMFHSE
                     TGAKEHTDEQKEVGGEPRREGA"
     gene            1101..1565
                     /locus_tag="VE844_07725"
     CDS             1101..1565
                     /locus_tag="VE844_07725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011565987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HZC01237.1"
                     /translation="MLSPFKGRGFYDPLSEVNRVFDDMFGSLMRRPGSQQRAQQLTAW
                     APAIDVVTKDSDLVIRAELPGVKQEDVDITLENNVLTVSGERKAEQEEERGGYHVRER
                     RYGSFSRSLALPEGLDESKIHARYDNGVLEVTVEGAAAVQEPKRIQIEGSSS"
BASE COUNT          360 a          393 c          485 g          346 t
ORIGIN      
        1 cgaggaggag atggtggaga tgttccgaga ggtgcgagac gagaacgagg caaagttact
       61 ttactgactc gaacacccgg aggaggaact cagggacagc gtgagcggga gcgtctccag
      121 cgcaagaggg tgttcgggga catatagatc acgaggtttt tgtttccgca atctgaggtg
      181 agcctgcgcc acattgcccc taatggagag atcgttactc tagacgagga gctaggtact
      241 gattagtgcg ccgtggtggg ggaccagcga ttcgctgatt cggaggagga agcgtctctg
      301 ctggtccgaa tgcttatggg gctgcttata accttttgtg gcttaggcag ccgatcaagc
      361 gccttctctt cgaggttctc cacctacctc cttctgctca tccgtatgct ctttagcacc
      421 cgtttccgag tgaaacatca tagaagttgt gatcgacccg gactgggcgg acacttcgcg
      481 gatctgaccc ttgataaatc tgcgctgctc gctgccctcg gggaattcac catagagtct
      541 ttgaaggcgc tcccgctcct cgtttagctc ccaggcgaga gacttcagtc ggtccaagga
      601 agcttcttca atctctcgct cgaacttctc ctcctcggct gacctcgccc actgcaggga
      661 caggagggcc gggccttctg gcttagaaag ctcttccgaa gaagaaagga gtaaataggg
      721 atctacgtcg agagcgcgcg ctaacctttg gagggtgccg aagtgtgggc gcgcaatcct
      781 tccggtctcg ataccggaga cagtagtcgg gctcagtccg gcctcttcag ccaaccgccc
      841 ttgggtccac atccgcaagc ggcgtatact ctgtagacgt tcgcctgttc tcgatccatt
      901 cataatcatc tctctaacgt tattcgccgt agagtaccag aaactgtatg agaacacaac
      961 atcaactgta ttttttggca gaagtttaca aaaaagtgtg aattaagtgt ttacaattcg
     1021 agctgagtag gtataatggg atcagagagg acaatcgtct cttattaggg aaaacacggt
     1081 aagagaagga ggtgtttgag atgctgagtc ctttcaaagg tcgcggattc tacgacccgt
     1141 tgagcgaggt gaaccgggtg ttcgacgata tgttcggaag cctgatgcgc cggccaggaa
     1201 gccagcagag agcacagcag ctcactgcgt gggctccggc gatagacgtg gtcaccaagg
     1261 atagtgatct ggtgattagg gccgagctgc ccggtgtgaa gcaggaggac gtggacatca
     1321 cgctcgagaa caacgtgctg accgtcagtg gggagcgtaa ggccgagcag gaggaggagc
     1381 gaggtggcta ccacgtcagg gagcgtcgct acggttcatt cagccgcagc ctggctttgc
     1441 cggaagggct agacgagagc aagatccatg ctcgctacga taatggtgtc ttggaggtca
     1501 cagtcgaggg cgctgctgcg gtacaggagc ccaagcgcat ccagatagag ggctcgagca
     1561 gctagagata gccgcgtcgg gctg
//
LOCUS       DASQSL010000751         1862 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_20059, whole genome shotgun sequence.
ACCESSION   DASQSL010000751 DASQSL010000000
VERSION     DASQSL010000751.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1862
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20059"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(221..1249)
                     /locus_tag="VE844_07730"
     CDS             complement(221..1249)
                     /locus_tag="VE844_07730"
                     /inference="COORDINATES: protein motif:HMM:TIGR01352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HZC01238.1"
                     /translation="MPEASLVNTPSTLITPADRFSITLCFAIILHTVVILGVNFSPTE
                     RDQRRFQSMEIILVQQRSEQPEKPSYLAQANLTGGGDTEDPIRPATPLATPVLDLSPV
                     IATSPSIKESPALPREPAEQQPEETLLPDERATQAAASPDPSQSPKPIAARSTEPSQP
                     TPLLPAESKAAQPPREASSTPKAELAADASTPTAAALISHSFTMASLNAEIDQKLESR
                     AKRPRRKYISANTREYKYASYMDAWRIKVERIGNLNYPDEAQRKKLGGDLILDVALNF
                     DGSVNEITLRRPSGHKILDDAAIRIVHLAAPFAPFPADLRRDVDILHITRTWQFLNGD
                     RFLSKAGG"
     gene            complement(1271..>1862)
                     /gene="gshB"
                     /locus_tag="VE844_07735"
     CDS             complement(1271..>1862)
                     /gene="gshB"
                     /locus_tag="VE844_07735"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008290969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004363 - glutathione synthase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HZC01239.1"
                     /translation="RDANEKLFTAWFPQCCPPSLVTRKAEHIKQFLDEHADLILKPLD
                     GMGGASIFRVCRGDPNTNVIIETLTRHGTQFIMAQRFIPEIVQGDKRILMIAGEPVPY
                     ALARIPARGETRGNLAAGASSKGVELTGRDYWICRQIGATLRAKGLWFVGLDVIGDFL
                     TEINVTSPTCVRELDAIYGLNIGGDLMDTIEHQLGI"
BASE COUNT          396 a          480 c          524 g          462 t
ORIGIN      
        1 tgactgaacg cctagcttag caagctggca aacttggaac tactgagttt catcgtcggt
       61 ctcctctatt gagcgctcag tttgggtaat tgcatccctc ccaaactgta ccgctcgatg
      121 gtggagccgg ctagatgatt atcagactgc aatttccaat tccctactgg tctgacaacc
      181 acccgctcct cgcatcaaaa aaagcagacg ccaatctatt ctatcccccg gccttactta
      241 agaaacggtc gccatttagg aactgccaag tccgggtaat atgcaggata tccacatctc
      301 gtcttaggtc tgctggaaat ggcgcaaagg gtgcggccag atgaacgata cggatagccg
      361 catcatccag gatcttatgg ccggaaggac ggcggagggt gatctcgtta actgagccat
      421 cgaagtttaa tgccacatcc aggatcagat cacccccgag cttttttctc tgggcttcat
      481 cgggatagtt caggttcccg atccgttcga cttttatgcg ccaggcatcc atgtatgagg
      541 catacttata ttctcgcgtg ttggccgata tatatttccg ccgggggcgt ttggcgcggg
      601 attctagttt ctgatcgatc tcggcattga ggctcgccat cgtaaaactg tgactgataa
      661 gcgcagctgc agtaggtgtt gaagcgtctg cagcaagctc ggctttgggg gttgaggaag
      721 cctctctagg aggttgtgca gcttttgatt ctgctggcag caggggcgta ggctgactcg
      781 gctctgtcga tcgcgctgca atcggtttgg gggattggga tggatcaggg gatgcagccg
      841 cttgcgtggc gcgctcatcg gggagtaggg tctcctcggg ctgttgttcg gcaggctccc
      901 ttggcagggc gggactttcc ttaatcgatg gagaggttgc aatcactgga cttaggtcta
      961 agacgggcgt tgccaatggc gtggcaggac ggatcggatc ctccgtatct cctccgccgg
     1021 tcaggtttgc ttgggccagg taactcggct tctccggttg ttcgctgcgc tgctgtacta
     1081 gaatgatttc catggattga aagcgccgtt ggtcccgctc ggttgggcta aagttgacac
     1141 ccaggatcac gaccgtatgg aggatgatgg caaaacaaag tgttatgcta aaacggtccg
     1201 ccggtgtaat gagggtgctc ggtgtgttca ctaagctagc ttcaggcata ttctgctcac
     1261 cgcgataatg ctatattcct aactgatgct cgatagtgtc cattaagtct ccaccaatgt
     1321 taagaccata gatggcgtcc agttcccgga cacaggtagg gcttgtgaca ttgatttccg
     1381 tgagaaagtc gccgatcaca tcaaggccta caaaccatag tcctttcgcc cgtaaggtgg
     1441 ctccgatctg gcggcagatc cagtaatcgc gcccggtaag ctccacccct ttactactgg
     1501 ctccagcagc caagttgccc cgcgtttcac cgcgtgccgg gatccgcgcc agggcatagg
     1561 gcaccggctc accggcaatc atcaggatgc gcttatcgcc ctgaacgatc tcaggaataa
     1621 aacgctgtgc catgatgaat tgagtgccgt gccgagtcag ggtttcgatg atgacattgg
     1681 tattcggatc gccgcgacag actcgaaaga tagaggctcc acccataccg tctaggggtt
     1741 tcagaataag atccgcgtgc tcatcgagaa actgtttgat gtgttcagcc tttcgcgtga
     1801 ccaggcttgg agggcagcac tggggaaacc aggcagtaaa cagtttttca ttggcatccc
     1861 gc
//
LOCUS       DASQSL010000752         1131 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_101102, whole genome shotgun sequence.
ACCESSION   DASQSL010000752 DASQSL010000000
VERSION     DASQSL010000752.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1131
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101102"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..302
                     /locus_tag="VE844_07740"
     CDS             <1..302
                     /locus_tag="VE844_07740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004512490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Fe-Mn family superoxide dismutase"
                     /protein_id="HZC01240.1"
                     /translation="EIWRADFIGVGKMRGVGWAICYQDPVSKRLSNHWVTLHEVGNVA
                     GFAPILVMDVWEHAFLLDYKPAERPKYIEAFFSNIDWDAVERRMQEGAAARPIGA"
     gene            500..>1131
                     /locus_tag="VE844_07745"
     CDS             500..>1131
                     /locus_tag="VE844_07745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013032238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HZC01241.1"
                     /translation="MSALLRLFPAPVEAVPLEGLYLAQALRTLGDPARAFVYSNFIAS
                     LDGRIALKSSHADPGIVPGAIANPQDWRLFQELAAQADVVITSGRYARQLAKGGAQDV
                     LPVSEELPYRDLLAWRQAHGLTPQPAVVIVSASLNVPITETLSRGGRSVFVATGSKAD
                     ASRVQALEDRGVSVLYAGTGWQVQGRSLIEVLQRQGFRTIYSTAGPQVLA"
BASE COUNT          223 a          333 c          340 g          235 t
ORIGIN      
        1 acgagatctg gcgggcggat ttcattggcg tgggcaagat gcgcggagtg ggctgggcga
       61 tctgttacca ggacccggtc agcaagcgtt tatcgaacca ttgggtgacc ctgcacgagg
      121 tcggcaatgt agccggcttt gcccccattt tagtgatgga cgtatgggag catgcgttct
      181 tgctcgacta taaacccgcg gagcggccca agtatatcga ggccttcttc tccaacatcg
      241 actgggacgc tgtggaaagg cgcatgcagg aaggtgccgc cgcgcgtcct ataggcgcct
      301 gaagcatcgg ctccagacag aaatcggagt ttccccttcc ctctcttgtc cccctctgtg
      361 gggaggggaa accgaggatg aacccaggga aagggaccgc ccaccttaaa gccacaatcc
      421 cctattttac attgctcgca ttgggttgta ttctctaaag atcgatataa acaacccgca
      481 tctgaaccct gagtctctaa tgagtgcact gctccggcta ttccctgccc ctgtcgaagc
      541 ggtgccgtta gaggggcttt atctggccca ggcgctgcgg acacttgggg atcccgcgcg
      601 ggctttcgtc tatagcaact ttatcgcaag cctcgatggc cggatcgcat tgaaatcttc
      661 tcatgcagac cccggcatag ttcccggtgc gattgccaat ccgcaggatt ggcgcctttt
      721 tcaggaactc gcggcccagg cggatgtagt gatcacgagc ggccggtatg cccgccagct
      781 cgccaaaggc ggcgcgcagg atgtgttgcc ggtaagtgag gaactgccct accgggacct
      841 gctcgcctgg cggcaggcgc acggcctcac cccccaaccg gcggtcgtca tcgtcagcgc
      901 cagcctcaat gtccctatta ccgagaccct atcgagaggc ggccgttcgg tattcgtcgc
      961 gaccggatcg aaggcggatg ccagccgggt acaggcgctc gaagatcgcg gcgttagcgt
     1021 gctatacgcc gggacaggct ggcaggtgca gggccgatcc ttgatcgaag tcctgcaacg
     1081 acagggattt aggactatct attccacggc cggacctcag gtattggcaa t
//
LOCUS       DASQSL010000753         1091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_6307, whole genome shotgun sequence.
ACCESSION   DASQSL010000753 DASQSL010000000
VERSION     DASQSL010000753.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1091
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6307"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..312)
                     /locus_tag="VE844_07750"
     CDS             complement(<1..312)
                     /locus_tag="VE844_07750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="small multi-drug export protein"
                     /protein_id="HZC01242.1"
                     /translation="MRLVLTLSLTAAFGALDLWVGIPTGLVLGLPPVLSGVTATAGAL
                     LGATLVTLAGERLQRWVYSQRWFAKRRERVERIWNRYGLIGVAFQSPILAGTLLSTLI
                     AL"
BASE COUNT          226 a          306 c          334 g          225 t
ORIGIN      
        1 cagagctatt agtgtgctca acagcgtccc cgccaatatg ggggattgga aggccacgcc
       61 tatcagtccg taacggttcc aaatacgctc cacgcgctcg cgccgcttgg cgaaccaacg
      121 ctggctgtag acccagcgct gcaaccgttc cccggccagc gtcaccagcg tcgctcctag
      181 cagggcgccc gccgtagcgg tgacaccgct cagcaccggg gggagtccta agacgagacc
      241 agtaggtatc cccacccaca ggtccaaggc gccgaaagcg gccgttaagg aaagtgtaag
      301 caccagcctc atccgtaata cctccgtagt gggggtaggc atcccccagg gtaccacgaa
      361 ggtggccacg ccctttggat cgaccggggg tcgcttacat aatcgcagtt ggctagagtt
      421 agcggtggcg cactgggtga tggggggatg aggggtgagg aggcgtaggg ggctgccccg
      481 ttggctctag ttaggctccg gcggagcgac ccgcaccgcg tctcgctggt ttaggctcgc
      541 atcaactcta ccgtagcggt ctcctccccc atccgacttt tctgatgcct gctttgacgc
      601 cgagagccct gtttttggac gtttcgaacc tgattcgagg gcactggtcg gttcggcggc
      661 cagtggaaga tggtacgtaa cggtagaact ggcgagggcg taactacacc taacaaaccc
      721 tctgatggga gctttgtgct gaggccgtgc ctcctgcacc gtcataacaa cgaattgggg
      781 gcggcctcgg agtcgtcgac gagggctgga catacccgag gacaccctgc ctcacgtccg
      841 agcatttcta ctgagtcgaa agcctccgga caaagagaag ctctcagaga aaaatcagta
      901 ccctttaagc ttcctttaag gttttggggc tagtatgttt agcaccgaaa atagccggct
      961 gtagaacagt gggagttacg tgttaataag cagcgatgac agatctttca gggtaagaag
     1021 aagggtgccc ttcggagtct tggtgtgtct ggcagttgtt ctcctcttcg tggcaagctg
     1081 ttcggaagcc g
//
LOCUS       DASQSL010000754         1045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_86345, whole genome shotgun sequence.
ACCESSION   DASQSL010000754 DASQSL010000000
VERSION     DASQSL010000754.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86345"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..632
                     /locus_tag="VE844_07755"
     CDS             <1..632
                     /locus_tag="VE844_07755"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008436246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HZC01243.1"
                     /translation="ELGRSGTVTEAIFDAGSNSNGRFYEKSNEVLGMTPTNYRAGGAN
                     TEIRFAIGECSLGSILVAQSERGVCAILLGDDPNALIRELQDKFPRADLIGGDEGFER
                     LVAKVVGFVEAPALGLDLPLDVRGTAFQQRVWQALREIPVGSMASYTAIAERIGSPNS
                     VRAVAQACAANALAVAIPCHRVVRNDGALSGYRWGVERKRVLLEREAKA"
     gene            complement(782..>1045)
                     /locus_tag="VE844_07760"
     CDS             complement(782..>1045)
                     /locus_tag="VE844_07760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004178613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01244.1"
                     /translation="IRVMVEEKAQQLQIGRADVTAQEEVAVGLDHVVPFLLEDRLKER
                     GGVYSKTADFAPYVQVDGLLVTGQKPASSGPGAEALLKLLRSA"
BASE COUNT          208 a          299 c          318 g          220 t
ORIGIN      
        1 atgagctcgg ccgcagtggc acggtaacgg aagctatttt cgacgctggt tccaactcca
       61 acgggcgatt ctacgagaaa tcgaatgagg tactcggtat gacacctacg aactatcgcg
      121 ccggcggcgc taatacggaa atacgttttg ccataggcga gtgctccctc gggtcgattc
      181 tcgtcgctca aagcgagcgt ggtgtttgtg ccattcttct gggcgatgat cccaacgcgc
      241 tcatacgtga gttgcaggac aaatttccgc gcgccgatct gatcggaggc gatgagggct
      301 tcgagagact cgttgccaaa gtcgtgggct tcgtcgaagc gccggcactg ggccttgacc
      361 tgccgctcga tgttcgcggg acagcattcc agcagcgcgt ctggcaggca ctcagggaaa
      421 ttccagttgg ttcgatggca agctacacgg ctattgcgga acggatcggt tcaccgaatt
      481 cggttcgggc cgtggcacaa gcctgcgcag cgaacgcgct ggcggtagcg ataccctgcc
      541 atcgtgtggt gagaaacgat ggtgcgttgt ctggctaccg gtggggcgtc gaacgtaagc
      601 gcgtcctgct cgaacgggaa gcgaaggcat gagcggtagc ttgtgctact cctatgggcg
      661 atgcagcgct tgcaagcgtg ggagaatcaa gggttttcac tggcggtcgg ctgagcacaa
      721 tgttaggcgc gaccacgcca cgcacggcaa tggtcatcgt ctgctgtcca ctcataccgg
      781 ctcaagcaga gcgaagcagc ttcagcagcg cttccgctcc gggtcccgaa gaggctggct
      841 tctgaccggt caccagcagg ccgtcgacct gaacataagg ggcaaagtcg gcggtcttgc
      901 tgtaaacgcc gcccctttcc ttgagccggt cctccaatag aaagggcaca acatggtcca
      961 aaccgaccgc tacttcttcc tgcgccgtga catcggcccg gcctatttgg agttgctgcg
     1021 ctttttcctc aaccatcacc cttat
//
LOCUS       DASQSL010000755         1120 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_143191, whole genome shotgun sequence.
ACCESSION   DASQSL010000755 DASQSL010000000
VERSION     DASQSL010000755.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143191"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..449
                     /locus_tag="VE844_07765"
     CDS             <1..449
                     /locus_tag="VE844_07765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006634518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HZC01245.1"
                     /translation="IGYMLIPEHLYDSVLKAQDTNLICAPLISQYAALGALEVGSSYC
                     RERLPAIERVRAVVLDELATLGSVCTLPLAEGAFYVLIKVYTEMHPMEVVKRLIKEHR
                     VAVIPGTAFGLDAGCYLRISYGALDPLTATEGIRRFTHGLKAILNR"
     gene            474..851
                     /locus_tag="VE844_07770"
     CDS             474..851
                     /locus_tag="VE844_07770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01246.1"
                     /translation="MRSIRLLALISIMAPCSGEDANGNHGVWGIGQSSCHSYNKAREA
                     GDYNDYKVYLMGYLTAYNSLIPDTYNITGTTDLNGVLAWLDRYCKKTAIDSYEHALKQ
                     IVTEMHETRMKKATGGPGWGRPR"
     gene            888..>1120
                     /locus_tag="VE844_07775"
     CDS             888..>1120
                     /locus_tag="VE844_07775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015436817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01247.1"
                     /translation="MPTLASIISQCLSYSPAQGGVCRDPIEEEEAHAIEGWMALTPAA
                     VLVPLIEQAMTILLTIRTPHLRHHPGQISFPGG"
BASE COUNT          239 a          319 c          321 g          241 t
ORIGIN      
        1 gcatcggtta tatgctcatc cccgaacatc tgtacgactc ggtcctcaaa gcccaggaca
       61 ccaatctcat ctgcgcgcca ttgatctccc agtatgcagc cctcggggcg cttgaagtcg
      121 gctctagcta ttgccgggag agattaccag ctatcgagcg ggtgcgcgcc gtggtgctcg
      181 atgaattggc tacgctcggc tcggtctgta ccctgccgct cgcggagggt gccttttatg
      241 tgcttattaa ggtgtatacc gagatgcatc ctatggaggt ggtgaagcgc ctcatcaaag
      301 agcaccgggt agcggtgatc ccaggcacgg ccttcggcct cgatgcggga tgttatctgc
      361 ggatctcgta tggggcgctg gatccgctca cggccaccga gggcatccgg cggttcaccc
      421 acgggctcaa agcgatttta aaccggtaat tatttgccat ggagcgcgct ctcatgcgat
      481 cgattaggct actggcgctt atcagcataa tggctccttg ctctggcgag gatgccaatg
      541 ggaatcatgg ggtctggggc atcggccaaa gctcttgcca tagttacaac aaggccaggg
      601 aagccggtga ctataatgac tacaaggttt atttgatggg ctatctaaca gcctacaata
      661 gcctgatccc cgatacctat aacatcaccg gcacgaccga tctgaatggg gtattggcgt
      721 ggctagaccg ttattgcaaa aagacggcta tcgacagcta tgagcatgcc ttaaagcaaa
      781 tagtcaccga gatgcacgag acccgcatga aaaaggctac aggcggtcct gggtggggaa
      841 ggcccaggta actctcatct gctagccgga tggacacgcc tggccacatg cctaccctgg
      901 ctagcataat cagccagtgc ctgagctatt ctccagcgca aggcggtgtc tgtcgagacc
      961 ccatcgagga ggaggaggct catgccatcg agggttggat ggcactgaca cccgctgccg
     1021 tgctggtgcc cctgatcgag caggccatga ccatcctgct cacgatccgt accccgcacc
     1081 tgcgccatca tcccggtcag atcagctttc ccggcgggtg
//
LOCUS       DASQSL010000756         1125 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_101124, whole genome shotgun sequence.
ACCESSION   DASQSL010000756 DASQSL010000000
VERSION     DASQSL010000756.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1125
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101124"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(174..>1125)
                     /locus_tag="VE844_07780"
     CDS             complement(174..>1125)
                     /locus_tag="VE844_07780"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NHL repeat-containing protein"
                     /protein_id="HZC01248.1"
                     /translation="TYPVFVARGEGDLIYVLCRATEYRPEGTRIAVCTVGEEYVTAFA
                     RGVPQQGPHEYNYEDGSLVWPTAIAFDSQWNCYVSDEWLNRISIFTKDGEYIGKWEER
                     PGSGDGELNRPSGMAFDQDDNLLIVDSLNHRVQKFTKDGKFLSKWGTQGSGDGQLNMP
                     WGIAIDKQGDVYIADWRNDRIQKFTPEGRFLMKFGSSGSGEGQFNRPTGVAVDKHGII
                     YVADWLNNRLQVFDADGSFITLRTGDATISKWGKDKLDANPEMWEERKRAQGLEREKD
                     FWGPTGVAVDDDCRVFVCESARNRLQVYQKQAASFANPRL"
BASE COUNT          241 a          338 c          288 g          258 t
ORIGIN      
        1 ccgtacgccc tactcattgt ctctcaatta aactggactg atataagctt gatgcactac
       61 tggatgtccc gcgccacaaa taaggaaaga cacgtgatag agaaacacaa tccgcacact
      121 tttcagttct tcctatcacg tggctttccc agaatggcag gtcggaataa cgcttacagg
      181 cgtggattgg cgaagctggc ggcttgcttt tgataaacct ggagacggtt gcgggccgat
      241 tcgcaaacga atacccggca gtcgtcatct acagcgaccc cggttggccc ccaaaagtcc
      301 ttttcccttt ccaagccctg agcccttttc cgctcttccc acatctcagg gttggcatca
      361 agcttgtcct tgccccactt ggaaatggtg gcatcgccgg tacgcaaggt aataaagctg
      421 ccatcagcgt caaacacttg caggcggttg ttgagccaat cggctacata aatgatgccg
      481 tgtttatcca ccgctacgcc cgtggggcgg ttgaactgtc cttcgccgga ccccgaagag
      541 ccgaacttca tcaagaatcg gccctcgggg gtgaacttct gtatgcggtc gttgcgccag
      601 tccgcgatat acacatcgcc ttgcttgtca atggcgatgc cccacggcat atttagctgg
      661 ccatcgccgc taccctgggt gccccatttg gacagaaact tgccgtcttt agtgaacttc
      721 tggacccggt ggttgaggct gtccactata agcaggttgt catcctggtc aaaggccatt
      781 cccgagggcc ggttgagttc accgtcgccg cttccgggcc tctcctccca cttaccaata
      841 tactcaccgt ccttggtgaa tatggaaata cggttcagcc actcatcgga tacatagcag
      901 ttccactggc tgtcaaaagc gatggccgtg ggccagacca gggaaccatc ctcgtagtta
      961 tactcgtgag gtccctgctg gggcacgccc cgcgcgaagg ccgtaacgta ttcttcgccc
     1021 accgtgcaga cggcaatccg agtgccctcg gggcggtact cggtggcgcg acacagcaca
     1081 tatatcaggt ctccctcacc ccgagcaacg aatacgggat aggtg
//
LOCUS       DASQSL010000757         1355 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_167631, whole genome shotgun sequence.
ACCESSION   DASQSL010000757 DASQSL010000000
VERSION     DASQSL010000757.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1355
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167631"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(313..>1355)
                     /locus_tag="VE844_07785"
     CDS             complement(313..>1355)
                     /locus_tag="VE844_07785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018953032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HZC01249.1"
                     /translation="SDPQAVLLAVFLLLSFGIIIVMGTILAPVIAAIVIAYLLEGLIQ
                     QLERLGIPRSLAVTGVFLLFTAALIFLVGGLLPLLSRQLTEFFQQLPALINDGQQLLL
                     RLPEHYPEFFTVEQVQELITVIRRGITELWQSVLSLSLASIPAIILILVYLVVGPFLV
                     FFFLKDKAPIIDWLTTNFLPHDRALLTRVWQEMDMQMGNYVRGKFNEVLLVGIITYIV
                     FGLMGLNYAPLLSVLTGLSVVVPYVGTTAVTVPVAFAAYVQWGWSAELGWVIAAYFII
                     HAIDGNIVVPLLFSEVVHLHPVAIVVAILVFGGWWGFWGVFFAIPLATLVQALIQVWP
                     RTAEVESSKIVE"
BASE COUNT          380 a          368 c          363 g          244 t
ORIGIN      
        1 taatttttaa gtgatgagat agaaatttat gtatgcggaa gacttgaaga cactgggtaa
       61 catgggcaag gccgtgctgg tactcatggg catggcgctc gccctgatta tcctggccaa
      121 cgcgctcggc taggcctgcc gagcttaact tcatacccca gagagaccct tgggctttaa
      181 ttcttcctcc ttcttgggaa attcgccgat ctcgtcctgt cagaggcgtg ggcggcccgc
      241 ctgacgtgtg atgtgcagta aaggcctaaa aaggccaggg cagggataga aaacccaagc
      301 ttgtttctca atttactcga cgatcttgga tgactctacc tcggctgtcc tgggccatac
      361 ttgaatcaag gcctgtacca aggttgcgag cggtatggca aaaaataccc cccaaaaccc
      421 ccaccagccg ccaaatacca agatagcgac cacaatcgcg acgggatgaa gatggaccac
      481 ctcggaaaat aataagggca ccacgatatt gccatcgatg gcatgaataa tgaaataggc
      541 ggcgatgacc cacccgagct ccgcgctcca gccccactgg acataggcag cgaaggccac
      601 cggcaccgtg accgccgtgg taccaacata gggcacgacc accgacagcc cggtgagcac
      661 ggacaagaga ggggcataat tgaggcccat taagccaaat acgatataag tgatgatccc
      721 gaccaagagg acctcattga acttgccgcg gacgtaattg cccatctgca tatccatctc
      781 ctgccacacc ctggtgagca gcgctcgatc gtgaggtaag aaattggtgg taagccagtc
      841 gatgatagga gccttatcct taaggaaaaa gaacacgagg aacggtccca cgacaagata
      901 gaccaagatc aggatgattg ccgggatcga ggccagggag agtgataata cactctgcca
      961 aagctccgtg atcccccggc gaatgaccgt gatcaattcc tgtacctgct ctacagtgaa
     1021 gaactccgga tagtgctcgg gcaaacgcaa caagagctgc tggccgtcgt tgatcagggc
     1081 gggaagttgc tgaaaaaact cggtaagttg ccgggacaac agcggtagca agccccccac
     1141 cagaaatatc aaggccgccg taaagagcaa aaacacgccg gtcacggcca aagaccgcgg
     1201 gatccccaac cgctccaatt gttgaattag gccttccagg agataggcga tgacaatggc
     1261 ggcaataacc ggcgccagga tcgtgcccat gacgatgatt atcccaaagc tcaagaggag
     1321 aaacaccgca agcagcacgg cctgaggatc ggaaa
//
LOCUS       DASQSL010000758         1051 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_167634, whole genome shotgun sequence.
ACCESSION   DASQSL010000758 DASQSL010000000
VERSION     DASQSL010000758.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167634"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..276)
                     /locus_tag="VE844_07790"
     CDS             complement(<1..276)
                     /locus_tag="VE844_07790"
                     /EC_number="3.6.1.7"
                     /inference="COORDINATES: protein motif:HMM:NF012911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HZC01250.1"
                     /translation="MSSARSCWRSRYFCCSRSASSWPNAWPQGKIMPRGESMAGQARM
                     IRTRIVISGRVQGVYFRASARDVARAHGVFGWVRNRAEGDVEALVEGE"
     gene            complement(170..916)
                     /gene="tatC"
                     /locus_tag="VE844_07795"
     CDS             complement(170..916)
                     /gene="tatC"
                     /locus_tag="VE844_07795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013537196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HZC01251.1"
                     /translation="MIPKIWRKAIASDDKLPFTDHLDELRHRLIISVVGIGVGFAISY
                     AFSQQILLLLQRPMPARLIFIAPTEAFFVNLKVALYAGVFLSIPLILFQAWKFVAPGL
                     YEHERHYSYPFLLISTVLFLIGAAFAYLVILPIALHFLIAQGGELWEPNITLSNYLAF
                     CMRLLLAAGLIFEFPVLMYFLAKVGVVTPEFLVKNRKYAVLVAFTLSAILTPPDVFSQ
                     ILLAIPLFLLFEVSIFVAKRVASGQDNAER"
BASE COUNT          259 a          296 c          304 g          192 t
ORIGIN      
        1 ctctccttcc accagcgctt caacatcgcc ctcggcacgg ttgcgcaccc aaccgaacac
       61 gccatgggcg cgggccacgt cgcgggccga ggctcggaaa tagacccctt gcactcgccc
      121 ggagatgacg attctggtac ggatcatcct ggcctgccct gccatgctct cacctctcgg
      181 cattatcttg ccctgaggcc acgcgtttgg ccacgaagat gctgacctcg aacagcaaaa
      241 atagcgggat cgccagcaag atctggctga agacatcggg cggtgtcagg atggccgaga
      301 gggtaaaggc caccagtacg gcatacttcc gatttttgac gaggaattcc ggcgtgacca
      361 ctccgacctt ggctaagaag tacatcaaca ccggaaactc aaaaatcaac ccggcggcca
      421 ggaggaggcg catacaaaag gcgaggtaat tcgataacgt gatgttcggt tcccagagtt
      481 ccccaccctg ggcaatgaga aagtgcagcg cgatcggcag gataaccaga tatgcaaagg
      541 cagcgccgat cagaaagagg acggtcgaaa tgagcaaaaa agggtacgag tagtggcgct
      601 catgctcata caaaccggga gcgacaaact tccaagcctg gaagaggatg agcgggatac
      661 tgagaaacac tcccgcgtat agcgcgactt tcaggttaac gaagaaagcc tccgtcgggg
      721 cgatgaagat cagacgggcg ggcatcggtc gttgcaggag gagcaagatt tgctgcgaga
      781 acgcgtaaga gatcgcaaag ccgacgccta tcccaacgac gctgatgatg agccggtgac
      841 gcagttcatc caggtggtcg gtaaacggca gcttatcatc ggacgcgatc gcctttctcc
      901 agatcttcgg aatcaagtcc cacaccctcc tcggctcgtt cgatacttgg cgctcgtcct
      961 gtcacacgtg gcgcaatggt tggggtacga ggactcgtgt tgggacttgc gtcggccatc
     1021 atcgtgctct gaaaatcatc agcggtccgt t
//
LOCUS       DASQSL010000759         1294 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_30724, whole genome shotgun sequence.
ACCESSION   DASQSL010000759 DASQSL010000000
VERSION     DASQSL010000759.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1294
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30724"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..602)
                     /locus_tag="VE844_07800"
     CDS             complement(<1..602)
                     /locus_tag="VE844_07800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01252.1"
                     /translation="MTPVRAPQARTPPIRLSELDERIIRAAGLYGYVTIIDLHHLLAP
                     VSYSTLRERARRLAGNADHVAGQYLLRFPLASPEKGTKARVYTPGVKGRQVLGLEGYY
                     RPSKIPSYHHLWHALTLTRFCVGAAAFGRTNPSFTLAEMRLSYEVAGSPPRVTIPING
                     QDATVAVIPDAWLLFVRSDGKKFPLLVEIDRASEYRMKFQ"
     gene            complement(599..>1294)
                     /locus_tag="VE844_07805"
     CDS             complement(599..>1294)
                     /locus_tag="VE844_07805"
                     /inference="COORDINATES: protein motif:HMM:NF013094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HZC01253.1"
                     /translation="LAAKIILIGAGGLGGEIGEALVRKGIGFLTLLDDDVVEVTNLNR
                     QRFYEADLGKNKAVCLARTLAKEGFCGTEIRGYGLRLEEAIALGVDLSGSVAIVGIDN
                     TPGRVAASTYFRRLSMPVVFTAVSETANSGYVFVQEASAESPCFGCMFTDAIDDKTYP
                     CTPSVKDMLKVVAGITVYAVDSLLMERKRFWNYKDEYLDGSVPGNSWRVEKRKECQLC
                     GPAPEEQHGGNHP"
BASE COUNT          267 a          402 c          356 g          269 t
ORIGIN      
        1 ctttgaaatt tcatgcgata ttcactcgct ctatcaattt ccaccaacag cgggaatttc
       61 ttgccgtctg accggacaaa cagcagccac gcatccggaa tgaccgcgac agtggcgtcc
      121 tggccattta tggggatcgt cacgcggggg ggactcccgg caacctcata actaagccgc
      181 atttctgcca gggtgaagga gggattggta cggccaaagg cggctgcccc gacacaaaag
      241 cgtgtgaggg tcaaggcatg ccagaggtgg tggtaggaag ggatttttga cggtcggtaa
      301 tacccctcca ggccgaggac ctgtctgccc ttcacccctg gggtgtagac gcgcgctttt
      361 gttcctttct ccggagatgc gagggggaac cgcagcaagt attgcccggc aacgtggtct
      421 gcgtttcccg ctaaccgccg cgcccgctct cggagcgtgg agtaggagac gggagcaagc
      481 aggtggtgta agtctatgat cgtcacatac ccatacagac cagcagcccg aatgatccgt
      541 tcatccagct cgctcaagcg tatcggcggg gttctcgctt ggggcgctcg aaccggtgtc
      601 atgggtggtt gcctccgtgc tgctcctccg gtgccggccc gcacagctga cactccttcc
      661 gtttctccac ccgccagcta tttcccggga cagacccatc caggtattca tccttgtagt
      721 tccagaagcg tttgcgctcc atcagcaggc tatcaaccgc atagacggtg atgccggcaa
      781 ccaccttaag catgtctttg actgacggcg tgcaggggta ggtcttgtca tcgatggcat
      841 ctgtgaacat gcacccgaaa cacgggcttt cggctgatgc ctcttggaca aacacatacc
      901 cgctgttggc cgtttcactg acggcggtga agacaaccgg cattgatagg cgtcgaaagt
      961 atgtggacgc ggcaacccgt cccggagtgt tatcaatccc cacaatggca acgctgcctg
     1021 agagatcaac cccaagcgct atggcctcct caagccgcag gccatacccg cgaatctcgg
     1081 tcccgcagaa gccctctttg gcaagggttc gcgccagaca caccgccttg tttttcccca
     1141 gatccgcctc ataaaaccgt tgccggttga ggttggtcac ctccaccacg tcatcatcaa
     1201 gaagcgtcag gaaacctatc cccttgcgca ccagcgcctc gccaatctcg cctcccaggc
     1261 cgccggcgcc aatgagaatg atcttagccg caag
//
LOCUS       DASQSL010000760         1079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_30727, whole genome shotgun sequence.
ACCESSION   DASQSL010000760 DASQSL010000000
VERSION     DASQSL010000760.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30727"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(889..>1079)
                     /locus_tag="VE844_07810"
     CDS             complement(889..>1079)
                     /locus_tag="VE844_07810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01254.1"
                     /translation="RNKQVSGYTRAPNAATFLEHPFHALVGRLLFYVRACRVCPRGLP
                     RLGIHRVSSRSVRTVFTT"
BASE COUNT          220 a          292 c          326 g          241 t
ORIGIN      
        1 tggagcgatc ttagacctcc aaaccggagc gttgcgagaa agcactaggg gtgtgagtat
       61 gagcatcccc ggtgggtccc ccagtgggcc aagtacacct cctcattggg tctattacga
      121 acgatcccag ctgcccaccg cgtttttctg aggggctcct acgcggtcct ggctttggag
      181 gactgtgtat cgtcgtggcc tggttcgtct cttgtacgga tgagagaaat cgcgtgatgc
      241 tctacataag acaagcttga gagggagccg ttacctcggc cccagtagta gtcccctcca
      301 tgctcgcaat caagcacacg gccagcgtga aaagatcact catttgcggt atatgcacag
      361 attgatctgg gtactacaat gtcgttattg ttgagtcggg cgccgcgata tttccccctc
      421 caatggcggc ccggctctcc tattggccag ccccgatcca actaccaggg accttcctcg
      481 aagatgtgcc atttagccga tgcacctctc tggctcgggg cttcttatac tgcggtcgtt
      541 gcctagacca cgagcgggtt ggggagatgg acaacaccac ttactacgct aggctcccat
      601 tagaccagca gcctgtttct gtaggagacg ttgcaaaaat catccgaggg cggctgtggg
      661 taatcatatt ggtgccgctc gttgtggcgg gcattgctgt tgggtttagt ttgttacgac
      721 cccctgtgta cgtggcttcc gccacgttgc tggtgggcaa aaagcagggc caggtgggca
      781 gtccagcaaa ggtaaattcg gagagcatcc accgcgtagt caaggggcaa cgcacgagtc
      841 gctgttgtac gagagacgcg acgcgcagtt ggccagttcg gcgattgatt aggtagtgaa
      901 aaccgtgcgc accgatcggc tactgacccg gtggatcccc agccggggca accctcgggg
      961 gcatactcga cacgccctga cgtagaacag gaggcggcct acgagggcgt ggaaagggtg
     1021 ttccaagaaa gtggccgcat tgggggcacg cgtgtaaccg ctaacttgtt tgttgcgtc
//
LOCUS       DASQSL010000761         1495 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_20152, whole genome shotgun sequence.
ACCESSION   DASQSL010000761 DASQSL010000000
VERSION     DASQSL010000761.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1495)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1495)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1495
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20152"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            803..1204
                     /locus_tag="VE844_07815"
     CDS             803..1204
                     /locus_tag="VE844_07815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020098556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4383 domain-containing protein"
                     /protein_id="HZC01255.1"
                     /translation="MINKKLGIGFGAVYVLVGLLGFVATGFSGLTSMNGPLLLGIFMI
                     NPLHNIVHVLVGALLIVGGLASLVVSKGVNATVGAVYLLVFVAGLAVQGSSANILALN
                     AADHGLHLISALLLLTVGLAADRSSTRAALR"
BASE COUNT          240 a          406 c          468 g          381 t
ORIGIN      
        1 accttcgctg aggcatcggc cccgaggcgc ctgatgacgg ccgtgacttt ctttatttca
       61 ttctcttacc tggacttacc actcaccgcg tatgaccaga ccactggtca caaatagcaa
      121 cccaaatacg caaacaattc caaagacgat ctccccggga ctgttttgcc tggtagtagg
      181 ggtagaattc aaacctgcga cccctgggtt atgaggtgag tggaacccgt cccatgcctc
      241 tcattgggtt ccccggcgtc gcgcctgacc agagccgtcc gtccatcgcg tctcaccccg
      301 tccagcctgt ccgaccgcag ctcatgacgt ccttactacc gtttttacta cggcagctga
      361 ggatcatcgc gggcaacggc gctggccttc tacccaaagg gacgacttgc acgctgggag
      421 ccgtgtgggc atcccgtcga ctctcacaga tcttgcatgg tgtggctgtt gtggttactc
      481 cgtggagctg gtcgcggtcg tgacctctag gcggcggcca gggagctctc ccgtgtctgg
      541 ccggtgtggt gctggctgcc ccggggtgtt ctgtggcggc cgtgggggtg accgtgaagt
      601 gtcggatgcc gcccagtcgg cccagttggc cacagtgctt gtggctggtt cgtcgtgata
      661 gaggccaggt tgtggaggtt gaggccctgt tggaggtgtg ggtgcggcgt gttgcgaacc
      721 ggggagaggt ggctgacgaa catcggctca gaacggggct tgacggtgct ccggttcacg
      781 tcgcagaagg gaagagtgtg tcgtgattaa caagaagctg ggcatcggct ttggtgcggt
      841 ctatgtcttg gttggcctgt tggggtttgt cgccaccggg ttcagcggtc tcaccagcat
      901 gaacggtccc ttgttgttgg ggattttcat gatcaatcct ctgcacaata tcgtgcacgt
      961 gctcgttggc gctttgttga tcgtcggggg tctggcttct ctcgtggtca gcaagggggt
     1021 taatgcgacc gtgggtgcgg tgtatttgct tgtctttgtg gcgggattag cggtgcaggg
     1081 ttccagcgcg aacatcctcg cactgaacgc agcggatcac gggctgcatt tgatcagtgc
     1141 tctgctcctt cttaccgtcg gccttgctgc cgaccgctcc tcgacacggg ctgcacttcg
     1201 ctaggttggc ctgttcgctg aaatctgctg tcatgggtgt tgggtcgtgt cctactactc
     1261 cacccgtccc tatgttgggg tgctgattcc acgggttgct gtgtactcgc agggtgcaac
     1321 cagagacgtt caagccaaga aatagccagt agttgccgat ttcgcaggcg tgaacatgac
     1381 gatttggaga ctttcagatc gacatgtccg ctatcggtgc gacagattta ttggcgtttg
     1441 ctccgtccgc ccttcaacga tcagttcttt cgaactggtt ggggctctac tagct
//
LOCUS       DASQSL010000762         2725 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_59624, whole genome shotgun sequence.
ACCESSION   DASQSL010000762 DASQSL010000000
VERSION     DASQSL010000762.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2725
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59624"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1559
                     /locus_tag="VE844_07820"
     CDS             <1..1559
                     /locus_tag="VE844_07820"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HZC01256.1"
                     /translation="CLLSTQSAEFGKEQMRLLEAFARAVVGRLELLGALEREQAARKK
                     ETQRSEERQRTLDSLSAHIAIIDESGTIVAVNKAWRHFAQANGGAGQNYAEGVNYLRV
                     CDSAAGEYSEEAAPFAEGIRSVLSGRREKFELEYPCHSPSERRWFIARVTPFAGGGSS
                     GAVIAHENITERKLTEQALRESEATLNSILNNLAEGVLVADSRGHVVFANSAARAMLG
                     ATDKEPLGQLPDPWEDFSLPDAVAHCTSSSEGIEAAVRYGESALRVKMECLVELERSW
                     GEVLVVIQDLSAGRQLETNQQRFLANAAHQLRTPIMAVVGAAELLATGEDADPAIKRR
                     LLNHIFTESRRMQRLSDTLLRLSRIGWDQREPNLKAMDLREAGQQAAELMAPLAESGG
                     LRILAEGESACVRADPEWLQEVLLVLLSNAIKHSSRGGDIRVRVRPGSVIVEDEGVGI
                     DQSDLPHIFERFYKGSGSSEGFGLGLSICKELTERMGGSISVHSREGVGTAVKVELPE
                     ASVDAPHTDR"
     gene            1537..2220
                     /locus_tag="VE844_07825"
     CDS             1537..2220
                     /locus_tag="VE844_07825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011563372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HZC01257.1"
                     /translation="MPHILIVEDDLAVRDIVQIALEREGMSVEAVGDGESALKRFRSA
                     GTFDLVLLDIMLPGIDGISLCQELRKSSDVPVVMLTARDGERSVVLGLEVGADDYITK
                     PISPLEVVSRVRAHLRRRRMNAPDQRLAFPGLVIDLLRRQVWVGENRVDLTAAEFEVL
                     SSLAAHPGWVYSRQQIMEQLWDGEFYGELRTADVHVRNIRKKIETDPRKPRYILTVRG
                     MGYKFAEMA"
     gene            2460..>2725
                     /locus_tag="VE844_07830"
     CDS             2460..>2725
                     /locus_tag="VE844_07830"
                     /inference="COORDINATES: protein motif:HMM:NF013263.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxyphosphogluconate aldolase"
                     /protein_id="HZC01258.1"
                     /translation="MSKAKVAEALREIGIIATVRVPNEQQLLRGVAALTDGGIRAVEL
                     PYTTVRGNGWLIQQLRENGLLIGVGAVTRSAQAREAGVLGTEFIT"
BASE COUNT          594 a          733 c          876 g          522 t
ORIGIN      
        1 tttgcctgct cagcacccag tctgccgaat tcggcaaaga gcagatgagg ttgcttgagg
       61 cgtttgcccg ggcggtggtc ggacggctgg agctgctcgg ggcgctggag cgcgagcagg
      121 ctgccaggaa aaaagaaacc cagcgcagcg aggaacggca acggacgttg gatagtctct
      181 ccgcgcacat agcgattatc gacgagtcag gtaccatcgt cgccgtcaac aaggcttggc
      241 gacactttgc tcaggcaaat gggggtgccg ggcagaacta cgccgaaggc gtcaactacc
      301 tccgggtgtg cgattcggcg gcgggtgagt attctgaaga agctgctcca tttgcggagg
      361 gaattcgttc ggttctcagc ggtcggcgcg agaaattcga gcttgagtat ccctgccatt
      421 cacctagcga gcggcgctgg tttatcgcga gggtgacacc atttgcgggc ggtggttcct
      481 caggagcggt gatcgcacac gaaaacatca ccgaacgcaa gctgaccgag caggcgctac
      541 gcgagagcga agcaacactc aactccatac ttaacaacct cgccgaaggc gtgctggtag
      601 ctgattcgcg ggggcatgtt gtgtttgcga attccgccgc acgcgccatg ctgggagcga
      661 ccgacaagga accactcggt caattgccgg atccttggga agattttagt cttccggacg
      721 cagtggccca ttgcaccagt agcagcgagg gtatagaggc tgctgtacgc tatggagaat
      781 ccgctctgcg ggtcaaaatg gagtgcctgg ttgagcttga aagaagctgg ggcgaagtgc
      841 tggtggttat ccaggacctt tcggcaggac gccaactgga gaccaatcag cagcggttcc
      901 tggccaacgc cgcccaccaa ctcaggacac ccatcatggc cgtagtgggt gctgcggaac
      961 tactggccac tggggaggac gcggatcccg ccataaagcg gcgcctcctg aaccacatat
     1021 tcaccgagag tcgtcgcatg cagcgattgt cggataccct gctacgcctg tcccggatag
     1081 gctgggacca gcgggagccc aacttgaagg ccatggattt gagggaagct ggacagcagg
     1141 cagccgagct gatggcaccg cttgcggaga gcggcgggct ccggatcctc gccgaaggcg
     1201 agagtgcgtg cgtgcgtgcc gaccccgagt ggctccagga ggtgctactg gtcttgctca
     1261 gcaacgccat aaagcactcc agccggggcg gagatatcag ggttcgcgta aggcctggta
     1321 gcgttatcgt ggaagacgag ggggtcggga tagatcagtc tgatctacct cacattttcg
     1381 agcgcttcta caagggaagt ggcagctccg agggctttgg tctggggttg tccatttgta
     1441 aggagctgac agagcggatg ggcggtagta tctccgtcca ttctcgagaa ggcgtaggga
     1501 cagcggtcaa agtcgagctg ccggaggcga gcgtagatgc cccacatact gatcgttgag
     1561 gacgatcttg cagtaagaga cattgtgcag atcgccctcg agcgcgaggg gatgagcgtc
     1621 gaagcggtcg gtgacggtga atcggcgcta aagcgttttc gatcagcagg gacgttcgat
     1681 ctggtcctcc tggacataat gctcccggga atcgacggga tcagcctctg ccaggaactc
     1741 aggaagagca gcgacgtgcc ggtggtcatg ttgactgcac gcgacggcga aaggagcgtc
     1801 gtcctgggcc tggaggtggg ggccgacgac tacatcacca aaccgataag cccgctggag
     1861 gtagtgagcc gcgttcgggc ccacctccgg cgccggcgca tgaacgctcc ggatcaacgg
     1921 ctcgcgttcc ccggcctcgt gatcgatctt ctgcgccgtc aggtctgggt gggggagaat
     1981 cgtgtcgatc tgaccgccgc agagtttgag gttcttagct ccctcgcggc ccatcccgga
     2041 tgggtctaca gccggcagca gattatggaa caactctggg acggagagtt ttacggtgag
     2101 cttcgcacgg cggacgtgca cgtccgaaat attcgaaaaa agatagaaac cgatcccaga
     2161 aagccccgtt acatcctgac cgtgcgcggg atgggttaca agtttgccga gatggcgtaa
     2221 ctggcgaaac cgtagactct agtcttgttt tcctcgatgt atacagtacc tggctaaggc
     2281 cagacctccg gatcatagct ttggagagat tcgtataccc acttggcaca taaacccggt
     2341 aatgcttcgg ggtgccccac gccagattat gaagacctct taacccgcta ttcgcagaac
     2401 cttaagccgg ccaagcaaca atgggtgggt gagcgaaagt cagaaagtgc gggcatcttt
     2461 tgagcaaagc taaggtggca gaggcgctga gagaaatcgg tatcatagcc accgtccggg
     2521 ttcccaacga acagcaactt ctccgaggag ttgcagcgtt gaccgacgga ggcataaggg
     2581 ctgtagaatt gccctacacc accgtccgag gtaacggatg gctcatacag caacttagag
     2641 agaatggact ccttatcggg gtcggcgccg tgactcgctc ggcccaggcc cgcgaagctg
     2701 gtgtgctcgg caccgaattc atcac
//
LOCUS       DASQSL010000763         1410 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_20158, whole genome shotgun sequence.
ACCESSION   DASQSL010000763 DASQSL010000000
VERSION     DASQSL010000763.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1410
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20158"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(319..636)
                     /locus_tag="VE844_07835"
     CDS             complement(319..636)
                     /locus_tag="VE844_07835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01259.1"
                     /translation="MGYLATGDQDKIGEEMTFGKNRPPLVPDPGQRVLLLSEDGSRIE
                     GFRAVSGPLTTETGEIIIRVAIEEEYRDSTREGRSAVSMAWPAEMVEVSVPWYKWQRW
                     FTR"
     gene            complement(662..>1410)
                     /locus_tag="VE844_07840"
     CDS             complement(662..>1410)
                     /locus_tag="VE844_07840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01260.1"
                     /translation="LIRCAKCDWNYSGLSRKQGGRYHFKYTCPAATARRFDPHVRRGG
                     CPWLDALWLENLVWHDIRGFVENPGEVLERVKEQMEERRTQTGELKERIASLAKRLVT
                     VQGEKDKYVKLYAAGHLDEEELEVHLLDVKNRISNLKMLIESAEAGLAREEQDAAAAK
                     NTATWLTSLRGGLQALEEDTDEAWHARRELVEQLVEKITVSRTEDGRAKIHIAYKFAP
                     PVQSASGITDHKTFEILAGEIPIPEALARL"
BASE COUNT          259 a          459 c          374 g          318 t
ORIGIN      
        1 gagggtgtac gggaggatct accctagcct ccgtggtgtg caccacgaga tccaggccct
       61 gcagcgtcag cacttcagct agtcagcatt tcagcacttc agctagtcag cacgccgcca
      121 ggcttcgtca ggcggcttgt cagcatgtcg gctagtacct gccagcgagg ttcccacccg
      181 cagccaggct ccgtggtaaa cgaagcgggt ccttatctac cgcagggcaa aacgaacgca
      241 agccgctccc caacaaagct gactagctga aatgctgaca agcggaggcc gaaggccgaa
      301 gcgtgctgaa atgctgaatc acctcgtaaa ccaccgctgc catttgtacc agggcacaga
      361 tacctccacc atttcggctg gccatgccat gcttacggcg ctgcggccct ctctcgtcga
      421 atccctgtat tcctcctcga tcgccaccct gatgattatc tcacccgtct cagtggtgag
      481 cggtcccgag acggcccgga atccttcgat gcgcgagccg tcttcggaca gcaacagcac
      541 ccgctgtcca gggtcgggca cgagaggggg cctgttcttg ccgaacgtca tctcctcacc
      601 aattttatcc tgatctccag tggcgagata tcccaaccgc ccatgatccg ccacaagcta
      661 tctagagtcg cgcgagcgcc tcggggatcg ggatctcccc ggccaggatc tcgaacgtct
      721 tgtggtccgt tataccactt gcagactgta cgggcggcgc gaacttgtag gcgatgtgta
      781 ttttggctcg gccgtcttcg gtgcgactta ctgtgatctt ctcaacaagc tgttcgacca
      841 attcgcgccg agcatgccac gcctcgtctg tgtcctcttc gagtgcttgc aggccgccgc
      901 gcaaggacgt gagccacgtg gccgtgttct ttgccgccgc ggcatcctgc tcttctctgg
      961 cgaggcctgc ctcggccgac tctatcagca tcttcaaatt cgagatacgg ttcttgacgt
     1021 ccaaaaggtg aacctccagc tcttcctcgt ctaggtgccc cgcggcatag agtttgacgt
     1081 acttgtcctt ctcgccctgg accgtcacca ggcgttttgc gagcgatgcg atcctctcct
     1141 taagctcgcc ggtctgtgta cgcctttctt ccatctgctc cttgacccgc tctaggactt
     1201 cgccgggatt ttctacgaat ccccggatat cgtgccatac gagattctcc agccacagag
     1261 catcgagcca cggacatccc ccgcgccgca cgtgcgggtc gaatcgtctc gccgttgctg
     1321 cagggcatgt gtatttgaag tgatagcggc caccctgttt gcgtgacaga ccgctgtagt
     1381 tccagtcgca tttagcgcac ctgataagac
//
LOCUS       DASQSL010000764         2007 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_195065, whole genome shotgun sequence.
ACCESSION   DASQSL010000764 DASQSL010000000
VERSION     DASQSL010000764.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2007
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195065"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..317
                     /locus_tag="VE844_07845"
     CDS             <1..317
                     /locus_tag="VE844_07845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009630203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01261.1"
                     /translation="WKLFADLFPPEPTRRGRGMPHTPFRKVINTLLYVLITGCRWCDI
                     PRGPQWATKSAAHRWLQRWHADGTLAAMQARLLGLAEERGMIQWQYGAVDGSFSPWQR
                     RR"
     gene            382..804
                     /locus_tag="VE844_07850"
     CDS             382..804
                     /locus_tag="VE844_07850"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01262.1"
                     /translation="MPLAARTTPANGDERAQVIPLLDSLHIRTGKRGRPRKRLKVLAA
                     DKGYDATDLRQRLRKRGIHPQMLKRVWKRRKPRGRPVKKEVPRFQAERTFAWFQRKYR
                     RLAVRWERLAACFTAFSYHGRHVYVGPKVYGSIRIPGR"
     gene            883..1811
                     /locus_tag="VE844_07855"
                     /pseudo
     CDS             883..1811
                     /locus_tag="VE844_07855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020503376.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT          427 a          556 c          614 g          410 t
ORIGIN      
        1 agtggaagct ttttgccgat ctgtttcctc cagagccaac caggcggggt cggggtatgc
       61 cgcatacgcc cttccgcaag gtcatcaata cgttgctcta cgtcctgatc accggctgcc
      121 gctggtgtga tattcctcgc ggccctcaat gggcgacaaa gagcgccgcc catcggtggc
      181 tgcaacgctg gcacgccgat gggaccctgg ccgccatgca agcgcgcctg ttagggctcg
      241 cggaggagcg tgggatgatt caatggcagt acggcgccgt ggacggctcg ttttccccct
      301 ggcaaaggcg gcggtgaggg cgtcgcctat ggccggaaag gcaaaggtct cctcatccac
      361 agtcttacgg acgccgctgg tatgccattg gcggcgcgca ccacgcctgc caatggggat
      421 gagcgtgccc aagtcatccc gctgctggac agcctgcata tccgcaccgg caaacggggt
      481 agaccgcgca aacgcctcaa ggtcctggcg gcggataaag ggtatgatgc cacagacctt
      541 cgccaacgcc tgcgcaagcg cgggatccac ccccagatgc tcaaacgggt gtggaagcgc
      601 cgcaagccgc ggggcaggcc cgtcaaaaag gaggtgccgc gcttccaagc cgagcgcaca
      661 tttgcgtggt tccaacgcaa gtaccgccgc ttggccgtcc gctgggaacg tctcgcggcc
      721 tgtttcacgg cgttctctta ccatggccgt catgtatatg tgggtccaaa agtttatggc
      781 tcaattcgga ttccagggag atgacagcgc tccctctcgt gagagtcgct cgccttggag
      841 tgggctcttg tgtcgtctcg tccaatgggc gatactggcg cgatgataca cattcaagcc
      901 ctcatcgacg acatcaaatg ttttgagacc gtccggaaca tacgctggcc ggatggcgtc
      961 cagtgtccaa cttgcgacag tgctgaggtg acgaaacaag ggcgcgacga gacccagccc
     1021 gagcgtcagc gctacctgtg taagtcctgt gagaggcgct tcgacgattt gactgacacc
     1081 atctttgccg gtcaccatca accccttcgg gtgtggatat tgtgcctgta tttcatgggc
     1141 ctcaacctgt cgaatcacca aatagcccag gagcttgatc tcacctcgtc tgatgtgcat
     1201 cagatgactt gccagttgcg ccagggcatt gtcgcccaga agtcgacggc caccttgagc
     1261 ggcgaggtgg aatgtgacga ggtctatatc gtggcggggc acaaggggaa gcccgatgaa
     1321 gtgaccaaaa agggcggtgc ggacggcgca gacggctcaa gggcaagcgc ggacggggca
     1381 cgctcgcaac ggagaagccg ccgatcttcg ggatgatcca gcgtggtgga gacgtggtga
     1441 ttcggatgct ggaaaacgtt caacaagtca cgatcaaacc gctgatccaa gccacgatcg
     1501 ctccgggtac ttgcgtgtat accgatgaat acgacatcta taaccgcttg ggaccgtggg
     1561 gctacgagca tgaaagtgtc tgtcacggtc gtggtgaata tgctcgggat gacgacggcg
     1621 atggctttca tgaagtgcac gtcaacacga tggaaggctt gtggtcctta ctgaggtcat
     1681 ggctgcgtcc acatcgtggc atctcgcaag acaatttacc gttgtatttg ggattctttg
     1741 aatttgttca taacgtgaga cgacgaggca aagcattgtt gggagcccta cttgacctct
     1801 tgctcacgta gctccccgga acgcgaattg agcctttaaa taaagtgttt gtcatgggaa
     1861 acctcacgaa ggatccggag cttcgtacca ccgcctcggg tcagtcagtg tgtacgttcg
     1921 gactggccac gaatcggttc tataccacgg gtgaagggaa aaaagagcag caggtcgaat
     1981 atcacacaat tgtggcgtgg ggcaagc
//
LOCUS       DASQSL010000765         1083 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_20167, whole genome shotgun sequence.
ACCESSION   DASQSL010000765 DASQSL010000000
VERSION     DASQSL010000765.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20167"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(184..753)
                     /locus_tag="VE844_07860"
     CDS             complement(184..753)
                     /locus_tag="VE844_07860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018335169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5872 domain-containing protein"
                     /protein_id="HZC01263.1"
                     /translation="MAKKSKGEKYTDPELRERIKEEIKESDRGGKKGQWSARKSQLLT
                     QEYEKRGGDYKGEKDESQKNLEKWTDEEWQTQEGDIQARGDDGETKRYLPQKAWENMS
                     EEEKRETEKKKREGSRGGRQHVANTEEARQARKGSQAPPLKGYDDLSVEEVEKKVQGL
                     PTEEIWSVRNYEKGHKNRKTLIEALDRMS"
BASE COUNT          179 a          372 c          248 g          284 t
ORIGIN      
        1 gaactgcgct cacggtactc caaccccttc gtccgtcatt accgcaaccc agaccaggcg
       61 ggcgacgcga gaataccccg ctcgtccctc tgccaaacag tcacacactc acagcacccg
      121 cccttaccag atgtcggccc actttgattc agcttgtcac tcagtttggg gtgacctcac
      181 caactaggac atgcgatcca gcgcctcgat gagggtcttg cggttcttgt gccccttctc
      241 gtagttgcgt acactccaga tctcttctgt gggcagccct tgtaccttct tctctacttc
      301 ttcgacgctc aggtcgtcgt atcccttgag cggcggggcc tgagacccct tgcgggcctg
      361 cctcgcctct tccgtattgg ctacgtgttg ccgaccccct ctcgagcctt cgcgcttctt
      421 cttttcggtc tcgcgcttct cctcttcgct catgttctcc caagccttct gcggtaggta
      481 gcgcttcgtc tcgccgtcgt ctccccgggc ctggatgtcg ccttcctgag tctgccactc
      541 ctcatccgtc cacttctcga ggttcttctg ggactcgtct ttctcaccct tgtaatcccc
      601 gccgcgcttc tcgtactctt gggttagcaa ctgagacttg cgggcgctcc actggccctt
      661 cttaccgccc ctgtcagatt ccttgatctc ttctttaatc cgctccctaa gctcggggtc
      721 ggtgtacttc tcccctttgg acttcttggc catcggttac ctctttctcc ctcccactta
      781 gtagggtgtt gcacctcgga agagcactca tcagggtgct cacaaacgat cgcttacctc
      841 atgaccataa aggcaatcat gcgtagcttc ggtaatcctc cacacagcag tacatggtgt
      901 tgggctgcga cccctgccag aaccagttgg gtcccctctg gcccggcaat tgacaacgga
      961 cctaccaccc gtcatgttga gccacagcat gagttacatg gcctcgagca gccatgcggg
     1021 aaaggcagca ataatcttat tgctccacgc agcagattag acagaggtac agatgtacta
     1081 gcg
//
LOCUS       DASQSL010000766         1863 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_6337, whole genome shotgun sequence.
ACCESSION   DASQSL010000766 DASQSL010000000
VERSION     DASQSL010000766.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1863
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6337"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(325..720)
                     /locus_tag="VE844_07865"
     CDS             complement(325..720)
                     /locus_tag="VE844_07865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01264.1"
                     /translation="MHCRNWQGQRGRHGRQTLVYACWGIGTPSTAWVYQTYRRRFGIE
                     TSYRQLNEARIKTTTRDPALRLLFVAIALILRNVWVWVHRQLLATPCRGGRKLNLGLL
                     PFKMLLLWLAYLAVLTFGIVDSVALAQAP"
     gene            complement(781..1497)
                     /locus_tag="VE844_07870"
     CDS             complement(781..1497)
                     /locus_tag="VE844_07870"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01265.1"
                     /translation="MRPSYSTLTPIHIYNYAATLLEPYLQWHDYGPKCTVKVLLQVLF
                     YAAGHLCSVLAACSQLRTAPSDQAVRDALTALCPDPTPLEQRLNRLFAAQIPKGLRKR
                     PQRVAIDLTLVPYHGQPHQRLEEIYRSQAKSGTTHFHAYATAYIVRRGQRFTVALIRV
                     EYGTPMVEVLKRLLHLLRQAGIRPRLLLLDRGFYRVAVIRYLYRARYPFIMPVVRHGR
                     AADDPRGPQRHPGLCRCQVQ"
     gene            1684..>1863
                     /locus_tag="VE844_07875"
     CDS             1684..>1863
                     /locus_tag="VE844_07875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01266.1"
                     /translation="MLKRFPQRVRPQKMRLRIRGKERTVQVFDSEVLLRGVWAGRAWP
                     ARVIVVVVPGLKLKPW"
BASE COUNT          428 a          482 c          583 g          370 t
ORIGIN      
        1 gcacgtcatt ttctagcctg gccttaactg gaaacaactc gagcggcaat gcttccagag
       61 gactgacaga agagcggccc ggcatgttca ccaccctatc aatcaatacc gccgctacca
      121 gcaacactcc tatgaggaca gcaattaaga agcgcataac gttgagcaag ggactgtggc
      181 actcaaaaat catattatag gtgccaggag cctgatgtca ggacacattt tgtaaattgg
      241 cgtgtcggta caagttagag acttgtgtga gactcagtag ttccaagttt actccattag
      301 cgaatgctgt tggtccgatt atggttaagg cgcttgtgcc agggcgacac tgtctacaat
      361 accaaaggtg agcacggcca agtaggccag ccataggaga agcatcttaa agggtagcaa
      421 gccaagattc agtttgcgtc caccccggca tggggtggcc agaagctggc gatggaccca
      481 cacccagaca ttgcggagga tcagggcgat ggcgacgaac aagagtcgta acgctgggtc
      541 acgagtggtg gttttgatac gggcctcatt aagttggcgg tagctggtct caattccaaa
      601 gcgccgacgg taggtttgat aaacccaagc ggtgctaggg gtaccaatcc cccaacaggc
      661 atagaccagg gtttggcgcc catgccgtcc gcgctgccct tgccaattac ggcagtgcac
      721 gtgagaataa gcacggtagc ggtgtgctta tcggcattgg tcagggtata ggtataccag
      781 ctactgcact tggcagcggc aaagacctgg gtgccgctgg ggaccccggg ggtcatcggc
      841 ggcgcgcccg tggcgaacca ccggcatgat aaaggggtag cgtgcccggt acagatagcg
      901 gatgactgcc acacggtaga agccccggtc aagcaagagc aaacgcgggc ggatcccggc
      961 ctgacggagc aggtgtaaca accgcttgag cacctcgacc atgggggtgc cgtactcgac
     1021 tcggatcagg gctacggtaa aacgctggcc ccggcgcacg atataggccg tggcataggc
     1081 atgaaagtgg gtcgtgccgc ttttagcctg actgcggtag atctcttcga ggcgctggtg
     1141 gggttgacca tggtagggaa ccaaggtcag gtcaatcgcc acacgctggg gccgcttgcg
     1201 caggcctttg gggatctgag ccgcaaacag ccgattcaat cgctgttcta aaggggtcgg
     1261 atcggggcac aacgccgtga gcgcgtcgcg caccgcctga tcgctgggcg cggtgcgcaa
     1321 ctggctacag gccgccaaca ccgagcacag gtggccagcg gcataaaaca gcacctgcag
     1381 gagtaccttc accgtgcact tggggccgta atcatgccac tgcaagtacg gctctaacag
     1441 tgtggccgca tagttgtaga tgtgaatcgg ggttagggta gaataagatg ggcgcatcgg
     1501 tctctccggc taagtttgtt gagacactta gtatcaggga gagtcgatgc gctcgtccaa
     1561 tggggcgcac tcaaccaatt aggaaaactt ggaactactg aggtcgtcta ttttgcgccg
     1621 ttgcgtcact cggcacgccg acgccgtccc aagctttttg gacaaaagtg tcgagttgac
     1681 aaattgctga agcgatttcc gcagcgcgtg cggccgcaga agatgagact gcggatccgg
     1741 ggcaaagagc ggacagtcca agtttttgac tcggaagtat tgttgcgagg cgtctgggcg
     1801 ggtcgtgcct ggcccgcacg ggtcatcgtg gtggtagttc ctggcttgaa gctcaagccc
     1861 tgg
//
LOCUS       DASQSL010000767         1020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_74466, whole genome shotgun sequence.
ACCESSION   DASQSL010000767 DASQSL010000000
VERSION     DASQSL010000767.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74466"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            136..708
                     /locus_tag="VE844_07880"
     CDS             136..708
                     /locus_tag="VE844_07880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007039299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF447 domain-containing protein"
                     /protein_id="HZC01267.1"
                     /translation="MIYEAIVITRNPDASLHIVPLGFREAGEYIVLAPFKPSTTLENL
                     WRTRQAVINLTDNVAIFAGCLTGHKDWPTVPAKVVDVGRLQDTLAHLELEVARIEEDE
                     VRPRFMCLVKHRETHAPFKGFNRAQAAVVEAAILVSRLHMLPQAKIDREIEYLRIAID
                     KTAGEQERQAWEWLMEKIAAFRQAVREDPP"
     gene            705..>1020
                     /locus_tag="VE844_07885"
     CDS             705..>1020
                     /locus_tag="VE844_07885"
                     /inference="COORDINATES: protein motif:HMM:NF016367.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(5-formylfuran-3-yl)methyl phosphate synthase"
                     /protein_id="HZC01268.1"
                     /translation="MTGFLASVNCLEEARIALQAGADVIDLKEPARGVLGAVPVSTLR
                     EVVRFIAGRSLVSATVGDLSGDPEVASEAVAEVAATGVDIVKVGLFDKENRIAFFQAL
                     AAQ"
BASE COUNT          226 a          260 c          324 g          210 t
ORIGIN      
        1 caggacgagg aactcgattg gggctgtgct taccgcaatc ccgcaccgac cgatcccggc
       61 caactccatg cgtataaagg cgaggggacc accctgcaag ccaagaagaa aaagaaaccg
      121 ctctgagtaa aatccatgat ctacgaagcg attgtgatta cccgtaaccc cgacgcgagt
      181 cttcatatcg tccccctcgg tttcagggaa gccggcgagt atatcgtgct ggcgcccttc
      241 aaaccctcca ccacactcga aaatctgtgg cggacgagac aggcggtgat caatctcacc
      301 gacaatgtgg cgatcttcgc cggttgtctt accgggcata aggattggcc gacggtgccg
      361 gcgaaggtgg ttgatgttgg acgcttgcag gatacgctcg cgcatctgga gctcgaggtc
      421 gcccggatcg aggaagatga agtgcgcccg cgctttatgt gcctggtcaa gcatcgggag
      481 acgcatgcgc ctttcaaagg gtttaaccgg gcccaagcgg cggtggtgga agcggcgatc
      541 ctggtcagcc gtctccatat gttgcctcaa gccaagatag atcgggagat cgagtatctg
      601 cggatcgcca tagacaagac ggcaggtgaa caagagcgtc aggcctggga gtggttgatg
      661 gagaaaatag cggctttccg ccaagcggtg agggaggacc ccccatgaca ggttttctgg
      721 ccagcgtgaa ttgccttgag gaagcgcgca ttgccctcca ggccggcgcg gatgtgatcg
      781 atctgaaaga acccgctcgg ggtgtccttg gggccgtgcc tgtttctacc ttaagagaag
      841 tagtgaggtt tattgctgga cgcagcttag tcagtgcaac ggttggggac ctgtctggag
      901 atccggaggt ggcctctgag gcggtagcag aggtcgcagc caccggggta gatattgtta
      961 aggttggttt gttcgataag gagaatcgaa tcgctttttt tcaagcactg gcggcacagg
//
LOCUS       DASQSL010000768         1228 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_183412, whole genome shotgun sequence.
ACCESSION   DASQSL010000768 DASQSL010000000
VERSION     DASQSL010000768.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1228
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183412"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(155..>1228)
                     /locus_tag="VE844_07890"
     CDS             complement(155..>1228)
                     /locus_tag="VE844_07890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013988469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HZC01269.1"
                     /translation="DTALNHVSYQQLRQEQARQREQGHYMGIGVTCYCEICGLGPSQV
                     AGAVGFGGGLWESATVRIYATGKINVFVGVSPHGQGEETTFAQIVADEIGVPVEDVEV
                     IHGDTDNTPMGWGTYGSRTTVVGGGALALATRKIKDKAKTIAAHLLEAAEADIEYADG
                     NFFVRGSRSQSKTIQDVALMANVAWNMPPGIEPGLEATTYYDPPNFTYPFGAHIAVVR
                     VDPDNGYIGLERYVAVDDCGPQINPIIVEGQVHGGVVQGIGQALWEGAVYDENGQLLT
                     GSMMDYALPRAHQFPDIETLSTVTPSPHNPLGVKGIGETGTIASTITVYNAVMDALKP
                     LGVTKIDMPLTPEKVWRAIHQQR"
BASE COUNT          233 a          368 c          346 g          281 t
ORIGIN      
        1 tatggtgtga caatacaggc attcttgttc actggcgtta atctgatatc atgcgccatg
       61 aatacagcgt tcacttcctt ttaagcgggt ttatccattc cgccacgagt ggacctgacc
      121 cgttcaccct gagcctgtcg aagggccttc ctccctacct ttgctgatga atggcccgcc
      181 acaccttttc cggagttagc ggcatgtcta ttttggtcac gccaagaggc ttgagggcgt
      241 ccattaccgc attgtagaca gtgatggtgg aagcgatggt tcccgtctcg ccgatgccct
      301 tgactcccag cgggttgtgg ggtgaagggg taaccgtaga aagagtctcg atatcgggaa
      361 actgatgggc ccggggcaga gcgtagtcca tcatggaacc ggtgagcaac tgcccgtttt
      421 catcgtagac cgccccttcc cacagggctt ggccaatccc ttgcactacc ccgccgtgta
      481 cctgcccttc tacaattata ggattaatct gcgggccgca gtcgtctacc gcaacataac
      541 gctccaggcc gatatagccg ttatctgggt ccacccgcac cactgctata tgtgcgccaa
      601 aggggtaggt gaagttggga gggtcgtagt aagtggtggc ttccaggccc ggctcaattc
      661 ccgggggcat attccaggcc acgttagcca tcaaggccac atcctgaata gtcttgctct
      721 gactgcggga accccggacg aagaaattgc cgtcggcata ctcaatatcg gcctcggcgg
      781 cctccagcag atgggcggcg atggtcttgg ccttgtcttt gattttgcgg gtagccaggg
      841 ccagtgcgcc gccgccgact actgtagtac ggctgccgta ggtgccccaa cccatggggg
      901 tgttgtcggt gtcgccgtgg ataacctcca cgtcctccac tggaaccccg atttcgtcgg
      961 ccacaatctg ggcaaaggtg gtctcctccc cctgaccgtg aggcgaaacc cccacaaaca
     1021 cgttgatttt gccggtggcg tagatgcgca cagtggcgct ctcccacagg ccgccgccaa
     1081 atccgacggc tcccgccacc tgggaagggc caaggccgca gatttcacaa tagcaggtta
     1141 cgccgatgcc catatagtgc ccttgttccc gctggcgggc ctgctcttgt cgcagttgct
     1201 ggtagcttac atgattcagg gccgtgtc
//
LOCUS       DASQSL010000769         2564 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_20195, whole genome shotgun sequence.
ACCESSION   DASQSL010000769 DASQSL010000000
VERSION     DASQSL010000769.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2564
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20195"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(283..1908)
                     /locus_tag="VE844_07895"
     CDS             complement(283..1908)
                     /locus_tag="VE844_07895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012747993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZC01270.1"
                     /translation="MTTIVKAPCDEAVIRAGSAEAPCSKRAAPWVLAATILGSSITFI
                     DSTVVNVALPVLQRELGTDIVGAQWIVEAYSLMLSALILVGGSLGDRLGRKHVFSMGL
                     LLFAIASAGCGMAQTTGQLIAARAVQGMGAAMLVPGSLAIISASFSKEDRGRAIGTWS
                     GFTAISAGIGPVLGGWLVENTTWRWIFFINLPLAAVVLAITWWRVPESRDESAGARVD
                     ILGAATATLGLGGVVYGLLESSERGFKDPRVVVSLAAGAVLLVLFIVTERKRGPRAMM
                     PLALFRSPTFAGANLLTLFLYGALGGLMFFLPFNLIQVQGFSATEAGATLLPFVLTMF
                     LLSRWAGGLVQRYGAKLPLVVGPIVASAGFTLFMLPGAAAGSYWTSFFPAVMVMSLGM
                     AASVAPLTTTVMGAIDERHAGIASGINNAVSRTAGLISIAVFGIVMTGAFARNFNARL
                     PSLDLPAETRAALEAQTSRLATITIPDELKGETKQAIKRGIEESFVSGFRVVILIAVA
                     LSLMSALFAWLLIEGRALPPNNSIHWQPNCVCR"
     gene            2190..>2564
                     /locus_tag="VE844_07900"
     CDS             2190..>2564
                     /locus_tag="VE844_07900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011381327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01271.1"
                     /translation="MLKQLEGRVLSGATLRRKLAALSSLFEYLCDHNAVTHNPVKGVK
                     RPKVKSYEGKTPALGEHQARALLAAPKGDSIKAKRDRAISGLTNCQASDREALGYFRP
                     KPPGRGAKTAPCATSRLWSVTTL"
BASE COUNT          576 a          774 c          718 g          496 t
ORIGIN      
        1 gacgatgaat aaggggaagt cgcgctggcc gacctgaacg agcgtttggt cgtccttata
       61 tgagcgcggc tcggcggcag tacattggcc cagctcagcg atttgtgcgt cgtccagtat
      121 cgggaaagcg atagactgga gatttggttc gctcataata actatctcct ctgcatccag
      181 tggatgcgca gccatacagg cattctatac cgtgccgcac gaaattgcga cgggttggag
      241 cagagggttg tgttgcgtta atttccgctg cgcataattt cgctatcggc agacacaatt
      301 aggctgccaa tgaatagaat tgttcggcgg cagagcacgt ccttctatta gtagccaggc
      361 gaaaagtgcg ctcatcagcg aaagcgccac ggcgatcaaa atgacaacgc ggaatccgct
      421 gacgaacgac tcttcgatgc cacgtttgat tgcttgtttc gtctcaccct tcaattcatc
      481 cggaatagtg attgtggcaa ggcggctcgt ctgcgcttcg agtgcggcgc gagtttccgc
      541 aggaaggtct aaagatggta gacgggcatt gaaatttcgc gcgaaggctc cagtcatgac
      601 gattccgaat accgcgatag agattagccc cgcagtccgg gagaccgcat tgttgatgcc
      661 tgatgcgatg ccggcatgtc gctcatcgat agcgcccatc acagtcgttg tcaacggcgc
      721 gacgctcgcc gccataccga ggctcatcac catcaccgcc gggaaaaagc tggtccagta
      781 acttccagca gccgcgccgg gtagcataaa cagagtgaaa cccgcgcttg cgactatggg
      841 accaacgacg agtggcaact tcgcaccgta gcgctggaca agcccgcccg cccagcgcga
      901 taagaggaac atcgtcagca cgaacggaag aagcgtggcc cctgcctctg tcgccgaaaa
      961 gccctgcacc tggatcaggt tgaagggcag aaagaacatc aatccgccaa gagcgccgta
     1021 gaggaagagc gtcaggaggt ttgctcccgc gaaagttggc gaacggaaaa gagccaatgg
     1081 catcatcgcc cgtggaccgc gttttcgctc agtgacaatg aataagacaa gcagaacagc
     1141 tcccgccgca aggctcacta ccacacgcgg gtctttgaag ccgcgctcgc tggactcgag
     1201 caggccgtaa acgacgccgc ccagtccaag ggtcgccgtt gcggcaccga ggatgtccac
     1261 tcgcgctccg gcgctctcgt ctcggctctc gggtacgcgc caccacgtga tcgcgagcac
     1321 cacagccgca agcggcaggt tgatgaaaaa tatccatcgc cacgtggtgt tctcgacgag
     1381 ccaacccccg aggaccggcc ctatacccgc agagatagcc gtaaagcccg accatgtgcc
     1441 gatggcccgc cccctgtcct ccttagagaa cgaggcgctg atgatcgcaa ggctccctgg
     1501 cacaagcatg gctgcaccca tgccttgcac ggctcgcgcg gcgatgagct ggcccgtcgt
     1561 ctgcgccatg ccgcacccgg cggaagcaat cgcgaagagc aggaggccca ttgagaagac
     1621 gtgttttctt cccaaacgat cacccagaga gccgccgacc agaattagcg cggagagcat
     1681 cagcgagtaa gcctcgacaa tccactgcgc cccgacaata tctgtaccca gctcacgctg
     1741 aagtacgggc agtgcgacgt tgacgactgt gctgtcaatg aaggtaatgc tcgatccaag
     1801 gatggtcgcc gcaagcaccc aaggcgcggc ccgttttgag cacggggcct ctgccgaccc
     1861 ggcccgaatc accgcctcat cacacggcgc tttaacgatc gtcgtcaaat atcgcctccc
     1921 ctgattcgtc ccttcactcg actatcgctg atttgcctga acggcaggct caaaaaatct
     1981 cttcaatgca gctctggttt ccgctggacg ttcttccatc agtcagtgtc cggtatcggc
     2041 aaattttatt gctgttacat tatcggcgac tattttcgcc tgaatttcaa tcgcatcgcc
     2101 cctcgcttta tcgcccgcaa tgaccaaaac cggcatcggc aatttatgag cggcgaattt
     2161 acggttgtct tccgcatcct gtttgttaaa tgctcaagca gctggagggg cgggtcctct
     2221 caggagcgac gcttcgacgc aagctcgccg cactctcttc cctctttgag tacctctgtg
     2281 atcacaatgc tgtcacccat aatcccgtga agggagtcaa gcgtccgaag gtgaagagtt
     2341 atgagggcaa gacgccagcg cttggcgagc accaagctcg ggcactgctt gccgctccca
     2401 aaggcgactc gataaaggcc aagcgtgatc gggcgatcag cgggctgacg aactgccaag
     2461 cgagcgaccg ggaagcgctg gggtatttcc ggcccaagcc tccgggaagg ggcgcaaaga
     2521 cggctccctg cgccacgtcc cgcttgtgga gcgtcaccac ccta
//
LOCUS       DASQSL010000770         1586 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_6355, whole genome shotgun sequence.
ACCESSION   DASQSL010000770 DASQSL010000000
VERSION     DASQSL010000770.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1586
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6355"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..219)
                     /locus_tag="VE844_07905"
     CDS             complement(<1..219)
                     /locus_tag="VE844_07905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013451362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HZC01272.1"
                     /translation="MRRDLRWKLAVIVIIIGVSLWFTFPLGERMNLGLDLQGGMHLVL
                     EVEAEKAVDSTTDRLVTEVSEGLAKLALP"
     gene            complement(493..855)
                     /gene="yajC"
                     /locus_tag="VE844_07910"
     CDS             complement(493..855)
                     /gene="yajC"
                     /locus_tag="VE844_07910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015720601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HZC01273.1"
                     /translation="MVEWAYAQAAGGAPAGGGGIFGQINMLIPFIAMFAIFYFLLIRP
                     QQKKQRELRQMLQNLKRGDRVITSGGIYGTIVKIRNDIVHLEVADQVRLRVNKSAIAD
                     MVAEADKVFDEVEEPKKG"
     gene            complement(1245..>1586)
                     /gene="glnA"
                     /locus_tag="VE844_07915"
     CDS             complement(1245..>1586)
                     /gene="glnA"
                     /locus_tag="VE844_07915"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020740274.1"
                     /note="forms a homododecamer; forms glutamine from ammonia
                     and glutamate with the conversion of ATP to ADP and
                     phosphate; also functions in the assimilation of ammonia;
                     highly regulated protein controlled by the
                     addition/removal of adenylyl groups by adenylyltransferase
                     from specific tyrosine residues; addition of adenylyl
                     groups results in inactivation of the enzyme; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase"
                     /protein_id="HZC01274.1"
                     /translation="EVRFPDGSSNPYLAFAAMLMAGLDGIENKIDPGDPLDKDIYELG
                     PEELKDVPSVPGSLEDALLALERDHDFLMKGDVFTKDTLDTWLYFKRHREIDEVRLRP
                     HPYEFALYYDV"
BASE COUNT          341 a          479 c          428 g          338 t
ORIGIN      
        1 tgggagggcg agctttgcta acccctcaga cacttccgtg actaagcgat cggtcgtgct
       61 gtctacagct ttctcggctt ccacttccag cacgagatgc atgccaccct ggagatccag
      121 ccctaaattc atacgctccc ctagcgggaa ggtgaaccac aaactgaccc cgatgatgat
      181 cacgatgacc gccagtttcc agcgtaaatc ccgccgcaag ctgttctcct ttacaccttg
      241 tgggccttac cagctgcaga gatacagggc cggtgtgtta cgcgttcacc cccaccctgc
      301 cgaaaagccg atgctgtgtt agctggggct cgtggcacag atgcaccggg gaaacaactg
      361 ccccgccgct gatgtccaac cactgatcag cgatacctct gcgtcgcctg ctatcatagc
      421 gaagatcgta cctatggaaa gcgtggatgt ggtcggggga gagtgagcca cacgaggggg
      481 agcgatgaag gctcagccct tcttaggctc ctctacctcg tcgaacactt tatccgcctc
      541 cgcgaccata tcggcaatgg cgctcttgtt gacgcggagg cggacttggt cggcgacttc
      601 gaggtgaacg atgtcgttgc ggattttgac aatagtgccg tagataccac cgctggtgat
      661 cacgcgatcg ccacgcttga gattttgcag catctgacgg agctctcgtt gcttcttctg
      721 ctgcgggcga atgaggagga agtaaaagat cgcaaacatc gcgatgaaag gaatcagcat
      781 gttgatttgg ccgaagattc cccctccacc ggccggcgcc cctcctgcgg cttgtgcgta
      841 ggcccattcc accatcgtta tctcctatcc atgaagcctt gaagctggca tgcatcgcag
      901 ggatcatgca gattagcgac acaattatag ccgggttttt cgcggtggtg caagtaaaat
      961 ccccgcgtca caaggggcag cttgcactgc aaagtctcgg ccgcgccaag catgcctggc
     1021 actgatacgg tggcgtccag agagagctgt gctgactcgc tcccgtgtac acgtattacg
     1081 ccccaaaata aaagcgggcc cccgcctccc aggcaccatg gggacccgct tgctccacgc
     1141 gtaatgctgt atacctaaat catccgcccc tccggccgac gctctatcac accgcatgcc
     1201 tgatttgagc ggccacaaac gcctcaacct gcaggcatct ctctttagac atcgtagtag
     1261 agggcaaatt cgtaggggtg cggccgtagg cgcacctcat cgatctcgcg atgccgctta
     1321 aagtacaacc aggtatccaa ggtgtctttg gtgaagacat cccccttcat caagaagtcg
     1381 tggtcacgct ccagcgctag cagggcgtct tccagacttc ccggcacgga gggaacgtcc
     1441 ttgagctcct cgggaccgag ttcgtagatg tctttgtcca gagggtcacc cggatcgatc
     1501 ttattctcaa tgccatccaa gccggccatt agcatcgccg cgaaggcgag atagggatta
     1561 ctggagccat cggggaaacg cacctc
//
LOCUS       DASQSL010000771         1131 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_30793, whole genome shotgun sequence.
ACCESSION   DASQSL010000771 DASQSL010000000
VERSION     DASQSL010000771.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1131
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30793"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(21..863)
                     /gene="folP"
                     /locus_tag="VE844_07920"
     CDS             complement(21..863)
                     /gene="folP"
                     /locus_tag="VE844_07920"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010961545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HZC01275.1"
                     /translation="MVTDKLLKSNRPLIMGILNRTPDSFSDGGLYLEEARALAHALKM
                     VEEGADIIDVGGESTRPGSRRIEAGEQIRRVVPVIEGLRGSLPAAIPISIDTTRAEVA
                     AAALAAGASILNDISAGRDDPAIFKLAAQTGAPIILMHMQATPETMQINPAYGDVVAE
                     VKSFLLKRAEAAQAAGIRREQVFIDPGIGFGKTNEHNLALMANLKQFVDTGYPVLLGT
                     SRKRFMGAICAQTEPKELFGATCATTALGVMAGVRIFRVHDIKANRQAADVAWAIHRL
                     SGPG"
     gene            complement(863..>1131)
                     /gene="cysB"
                     /locus_tag="VE844_07925"
     CDS             complement(863..>1131)
                     /gene="cysB"
                     /locus_tag="VE844_07925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020209628.1"
                     /note="LysR-type transcriptional regulator; contains
                     helix-turn-helix (HTH) motif; in Escherichia coli this
                     protein regulates cysteine biosynthesis by controlling
                     expression of the cys regulon; autoregulates expression;
                     crystal structure of Klebsiella aerogenes showed tetramer
                     formation; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HTH-type transcriptional regulator CysB"
                     /protein_id="HZC01276.1"
                     /translation="GLGVGIIAHMAYDPAIDSGLCALDAGHLFEASITKIGFHKGMFL
                     RGYMYDFIELFAPHLIRSLVEQAAQASSREEVDALLGPISLPAR"
BASE COUNT          246 a          351 c          310 g          224 t
ORIGIN      
        1 cgcgttagcc acatcgcggc ctaaccaggc cctgaaagtc gatggattgc ccaggccaca
       61 tccgcggcct ggcggttggc cttgatatcg tgtacccgga agatccggac acccgccatc
      121 accccaagtg cagtggtggc acaggtggcg ccgaaaagtt ccttgggctc ggtctgcgca
      181 cagatcgctc ccataaaccg cttgcggctg gtccctaata acaccggata gccggtatcg
      241 acgaactgct tgagatttgc catcaatgcc agattgtgct cgttggtttt accaaagcct
      301 atgccgggat cgataaaaac ctgttcccgc ctgataccgg cggcctgcgc tgcctctgcc
      361 cgcttcaaaa gaaacgactt cacctcggcg acgacatcgc cataggcggg gttgatctgc
      421 atggtctccg gggtggcttg catatgcatc aagataatag gcgcacccgt ttgtgcagcg
      481 agtttgaata tcgcgggatc gtcgcgcccg gccgagatgt cattgaggat agaggccccc
      541 gctgccaggg cggcggctgc cacttctgca cgagtggtat cgatactgat cggtatagct
      601 gccggcagcg atccgcgcag accctcgatt acagggacaa cccggcggat ctgctccccc
      661 gcctcgatcc gccgtgagcc cggacgggtc gattccccac cgacatcgat gatatccgcc
      721 ccttcctcta ccatcttgag cgcatgtgcc agagcccgcg cctcctcgag ataaagacct
      781 ccatcggaga agctgtcggg cgtcctattg aggatcccca tgataagcgg tcggttggat
      841 ttcaatagct tatcggtgac cattaccgcg cagggagtga aatagggccg agcagagcgt
      901 ctacttcttc cctcgagctc gcttgcgccg cctgctcaac cagggaacgg atcagatgag
      961 gcgcaaagag ctcaatgaaa tcatacatat aaccccgcag aaacatcccc ttgtgaaaac
     1021 cgatcttggt gatactggcc tcaaacaggt ggcccgcatc cagggcgcac aatcccgaat
     1081 caatagcggg atcgtaggcc atatgggcaa tgatcccaac cccaaggccc a
//
LOCUS       DASQSL010000772         1048 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_30795, whole genome shotgun sequence.
ACCESSION   DASQSL010000772 DASQSL010000000
VERSION     DASQSL010000772.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30795"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..270)
                     /locus_tag="VE844_07930"
     CDS             complement(<1..270)
                     /locus_tag="VE844_07930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01277.1"
                     /translation="MSESITVITLLLSALDRIGLQAVFDRDPYESRRRVLPGTRRVKV
                     LVVYQMLGTEKLRGLIRPLTEHAGLQAALGGRVALNTWSNGVRERD"
     gene            complement(509..>1048)
                     /locus_tag="VE844_07935"
     CDS             complement(509..>1048)
                     /locus_tag="VE844_07935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZC01278.1"
                     /translation="GLVPQDPVIFGANAWENIRYGRPEAQEVEVRAAAEAAFATEFLE
                     QLPQGFNTFLGERGVRLSGGQRQRIAIARAILRDPRVLLLDEALSALDAESEQMVQMA
                     LEKLMVDRTTLIIAHRLATVLKADRIVVLDRGRIVACGSHAQLMSQGGLYARLAALQF
                     DHFKASKVAGSVPNTYVGS"
BASE COUNT          240 a          314 c          274 g          220 t
ORIGIN      
        1 atcccgctct cgcacaccat tggaccaggt attaagcgcc accctcccac ccagtgccgc
       61 ttgcaaccca gcgtgttcgg tgaggggccg aatcagcccg cgcagtttct cggtgccgag
      121 catctgatag acgaccagca ctttgacccg gcgcgtgcca ggcagcacac ggcggcgcga
      181 ttcataggga tcccgatcaa agaccgcttg caagccgatg cggtccaagg cagagagcaa
      241 caaggtgatg acggtgatag actccgacat gcgaatcctc cttcaagttt aattccttac
      301 ctcagtctgc ctgatggggg gaagattcgc atagcggcta catttatcat aaagcttttc
      361 aataaactgt ttttatatca acggcctaca tatgggacag ggctgacccc tcatggttgc
      421 gtttataagg aggcactgaa gtgagtcggt gaacttatat agccagcgta gcacgaaaac
      481 aataaacaca taaccatcct tatcgcgctt aagatcccac gtatgtattg ggcacggatc
      541 ctgccacctt cgaggcttta aaatggtcga attgcaaagc ggccaagcgc gcataaagcc
      601 ccccttggct catcagctgt gcatggctgc cacatgctac gatccgcccc cggtctagga
      661 cgacaatacg atctgccttt aagacagtcg ctagacgatg agcgatgatc agggtggtcc
      721 gatcgaccat aagcttttct aaggccattt ggaccatctg ttcactctcg gcgtccagtg
      781 cgctcagcgc ctcgtcgagc aatagcaccc gtggatcgcg gaggatcgcg cgggcgatcg
      841 cgatccgctg gcgttgaccg ccagagagcc gcactccgcg ttctccgaga aaggtattaa
      901 acccttgagg caattgctct aaaaactctg tcgcgaaggc ggcctcggca gccgctcgca
      961 cctccacctc ctgtgcttcc ggcctcccgt agcggatatt ctcccaggcg ttggcgccaa
     1021 agatcacagg gtcctgcggg accaggcc
//
LOCUS       DASQSL010000773         1121 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_112759, whole genome shotgun sequence.
ACCESSION   DASQSL010000773 DASQSL010000000
VERSION     DASQSL010000773.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1121
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112759"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..413
                     /locus_tag="VE844_07940"
     CDS             <1..413
                     /locus_tag="VE844_07940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="ISKra4 family transposase"
                     /protein_id="HZC01279.1"
                     /translation="QFGDDAEQEQEWVEAMMARLFWGYVDWAIEGLEALQPRDSQAAE
                     EIRKLMGFLRNSAGRLHYRAARKGGYPIGSGGIEAANKCISHVRLKRSGAWWYIEQAN
                     HMLALRCAIYNGTFARVFETYKRRVLQRHRGNPL"
     gene            complement(832..>1121)
                     /locus_tag="VE844_07945"
     CDS             complement(832..>1121)
                     /locus_tag="VE844_07945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014351293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polysaccharide deacetylase"
                     /protein_id="HZC01280.1"
                     /translation="MLAWNREADYFLQMIKDQFDTLYREGAENGRVMCLALHPHNIGR
                     PNAAKHLDEALRYILGHDGVWNTTADDIAEYYLTNCYDQVSSWIAARKAQP"
BASE COUNT          226 a          301 c          340 g          254 t
ORIGIN      
        1 tgcagttcgg cgatgacgcg gagcaggagc aagaatgggt ggaagccatg atggcccgcc
       61 tgttctgggg ctatgtggac tgggcgatcg aggggttgga ggccctgcag ccacgcgata
      121 gccaagccgc cgaggagatc cggaagctga tgggctttct gcggaacagt gccgggcggc
      181 tgcactaccg cgcggcccgg aagggaggct atcccatcgg gagcggtggc atcgaggccg
      241 ccaacaagtg catcagtcat gttcgcctca agcgctcagg tgcctggtgg tatatcgagc
      301 aggctaacca catgctggcc ttgcgctgtg ccatatacaa cggaactttt gctagggtct
      361 ttgagaccta caaaaggagg gttcttcagc gacatcgggg caaccctcta taagaatcac
      421 gtaatgcacc ctttatctac taactggttg cgagttttgc gattggtcct aacctcttgt
      481 agtatctggc ccaaacccaa cacttaaacc atgagccgcc aactgcctgg aatacgttgt
      541 taagcaataa gttgtggcgt ggtgatgcgt ttgagcatcg tgaacatctt cttggtgtca
      601 gaatccaggg ggcgggctcc accgcgcctg cgcgctcgcg ggtcgtgttt caaaagtgga
      661 gatgtcgtcc cctatggtgt tgatatacaa tgaattattt ccatctatat ccacgtttga
      721 aacaccgccc atattggcta cttgtaaaac ggcgtggaaa tcgagtgcat agcggtcagc
      781 ggacggtgac ccgccgcccg tcttcgtcga tgccccgttg gtcggacgcg cttatggctg
      841 ggctttgcgt gcggcgatcc aggatgacac ctggtcgtag cagttggtga ggtaatactc
      901 ggcgatgtcg tcggccgtgg tgttccacac gccgtcatgg ccgagaatgt accgcagcgc
      961 ctcgtcgaga tgcttggcgg cattcggacg cccgatgttg tgcggatgca gcgccagaca
     1021 catcacgcgc ccgttttccg cgccttcccg atagagcgtg tcgaactggt ccttgatcat
     1081 ctgcaggaag taatcggctt cgcgattcca tgccaacatg c
//
LOCUS       DASQSL010000774         1020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_30826, whole genome shotgun sequence.
ACCESSION   DASQSL010000774 DASQSL010000000
VERSION     DASQSL010000774.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30826"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            536..856
                     /locus_tag="VE844_07950"
     CDS             536..856
                     /locus_tag="VE844_07950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01281.1"
                     /translation="MRVAVFVLTVVFWLSFVVLVGWVTLYAWNDALIVDQLGEKGARF
                     LNTVLFGVVALSSGLLVAYYRLTNIFIDPERYWTGAEVFYALVLFASLFFGLYSFLGW
                     YFYG"
BASE COUNT          200 a          264 c          313 g          243 t
ORIGIN      
        1 ttcttcggga taagggacaa agcctgtaag gaagacgagc aagagggcaa gcgcgatgag
       61 cgccacacac accgcacaca gcgaccaggc cagccaggag gcagtgcggt ggctcatccc
      121 accgactcct ccatcctgtt cccttgaccc tgccgtcaca accctactct acagggctag
      181 cgtctcctaa acgttacggc agccgttacg agatagcaag gtgtggagca attccgccca
      241 cgccgccatt tctgctccta gcttcgtcgc tccttcgcga cggcgatgtg agcagcgcct
      301 acatcgacgt cacttccact tcttcgggcg cttgcgcttg gtccgacaga gccgggtggg
      361 gaagcggtgc aggagcgcgt gcggatcggg agtagcccgc acgttgtggc tgtgtcgagc
      421 tgtgtgttcc agtctctcac ggtgttgggg tagggtggtt ggacaagggc gagaaggcgc
      481 acggaaatgt agactacata cagagagctc acgttttgtg tggggtgttg ccagagtgag
      541 ggtagcggtt tttgtgctca cggtggtgtt ctggctgtct ttcgtggtct tggtaggctg
      601 ggtaacgctg tacgcttgga acgatgctct tatcgtcgac cagctagggg agaagggggc
      661 acgatttctc aacacggtct tgtttggtgt cgtagcgctc tcgtctggtc tgctcgttgc
      721 gtactaccga ctcaccaaca tattcataga cccagaacgc tattggacag gagcggaagt
      781 cttctatgcc ttggtgctgt tcgcgtcgct tttcttcggg ctgtacagct ttctcggctg
      841 gtacttctac ggctgagtac ggcacgacca tcctgaaata ccgctaggcg tcttctagct
      901 tgacttccaa cctttcgtct gagagcgtgg cactgaagtg gaagggagca gagtgtggac
      961 aagaaggggt ttttgtacaa acagaagcag ggggttcaaa gccttcttcg aaaaatcgtt
//
LOCUS       DASQSL010000775         1549 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_195111, whole genome shotgun sequence.
ACCESSION   DASQSL010000775 DASQSL010000000
VERSION     DASQSL010000775.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1549
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195111"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            162..578
                     /locus_tag="VE844_07955"
     CDS             162..578
                     /locus_tag="VE844_07955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01282.1"
                     /translation="MRNTARQTRDNRTITVDFHDETTYVKLLDDRKAFVEFVLAFLLA
                     LGFQLKHKVPCGGGGCLTRHSHYMRVRVGGVTIWRIQCTTCKAVFTILPHFILRYRQM
                     RSEVARDALMATQGGLSLALCAVIGHLSPMALYRLV"
     gene            606..1421
                     /locus_tag="VE844_07960"
     CDS             606..1421
                     /locus_tag="VE844_07960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01283.1"
                     /translation="MLTRCGLPLPTYFLADEKHSRCLAENVYLPTIVSGRVIWHLGYT
                     KEASAAAFTQSYQEFQCVAFQHEPSYRVRGVLTDGFDSTTKSMRTLFPGARLGFCLRH
                     ALTKLPKKLAAIASPLRQSLRVKFHTLLYRARQRKSLRVFTLGQRLRHFADHVTQKAG
                     VANGECIRRWFQDKKAGWYAVLEDPQMPAMSTLLDQAHNAIDRKLFMMKAFHHPHGSQ
                     QAFLAGLAHLYNLIPYQCRAKHASRCGVEVEGGKVPTRDWFLNLQILTSGGFQ"
BASE COUNT          304 a          470 c          425 g          350 t
ORIGIN      
        1 ataacgcggg aagagggtga ttgccactcc taggaatgga gcacattcca tcggatttag
       61 tggtggcagg cctctaccct tcgcgatccc cttgaaattg tgcaggtatt actccatttt
      121 gggtcatcag ctgcactgac tctctgacct gaggatgacc catgcgaaac acggcccgcc
      181 agacccgtga caaccgcacc atcaccgtcg atttccacga tgaaacgacc tacgttaagc
      241 tcctcgacga ccgcaaggcg tttgtcgagt tcgtcctcgc ctttctcctc gcccttggct
      301 ttcaactcaa gcataaggtg ccctgtggcg gcggcgggtg cctgacccgc cactcgcatt
      361 acatgcgcgt ccgtgtgggg ggagtcacca tctggcgcat ccagtgcacg acgtgcaaag
      421 ccgtgttcac tatcctgcca catttcattt tgcgctatcg ccagatgcga tccgaggtcg
      481 ctcgcgatgc gctgatggcc acccagggtg gcctcagttt ggcgctgtgc gcggtcatcg
      541 gtcatctctc gcccatggcc ctctaccgtt tggtctgagc ctttggtcag cagagtttgg
      601 tcatcgtgct gacccggtgt gggctgccgc tgcccacgta tttcttggcg gatgaaaaac
      661 acagccgctg tctggcggag aacgtgtacc ttcctaccat cgtcagtggc cgtgtgatct
      721 ggcatctagg gtacaccaag gaggccagtg ccgcggcttt tacccagtcc tatcaggagt
      781 ttcaatgcgt ggcattccag catgagccgt cctatcgggt ccgaggggta ctcaccgatg
      841 gctttgacag caccacgaag agtatgcgga cactgtttcc tggggcgcgt ctcggcttct
      901 gcctgcgcca cgcgctcacc aagctcccga agaaactggc ggcgatcgcg tcgccattac
      961 gccagtcgct ccgcgtgaag ttccataccc tgctctatag ggcgcgccag cgtaagagct
     1021 tgcgggtgtt tacgctgggt caacggctcc gtcactttgc tgaccacgtg actcaaaaag
     1081 caggggtggc caatggggag tgcatccgac gctggttcca ggacaagaag gcgggctggt
     1141 atgccgtgct cgaagacccg cagatgccgg caatgagcac cctacttgat caagcgcata
     1201 atgccatcga ccggaagctc tttatgatga aagcattcca tcatccccat gggagccaac
     1261 aggcgtttct tgcaggattg gcacacctgt acaaccttat cccctaccaa tgtcgcgcca
     1321 agcacgccag ccgatgtggt gtggaagtcg aaggaggcaa agtcccgaca cgcgactggt
     1381 tcctcaacct ccaaatcctc acctcgggag gcttccaatg agcggtgaca tgctccacca
     1441 ctaaatccga tggaatgtgg aatttcctat agactcccct tttggctttt cttaacttca
     1501 tgccattcgg ctcttggccc gtgttggtga cgtggagcac acgggcacc
//
LOCUS       DASQSL010000776         3732 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_101250, whole genome shotgun sequence.
ACCESSION   DASQSL010000776 DASQSL010000000
VERSION     DASQSL010000776.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3732)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3732)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3732
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101250"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2600)
                     /locus_tag="VE844_07965"
     CDS             complement(<1..2600)
                     /locus_tag="VE844_07965"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HZC01284.1"
                     /translation="MDNDRGAALLQLVGELAAEVHPAQTPKRSVSLDSTLSREIGLDS
                     LARVELIARIERHFGVSLPEHVFADAETPRDLLAALWRASTPGKSPVTPKIAPIDAVA
                     VGSSVPEMAQTLVEVLNWHVNTQPDRPHIRIVQEQGQEEVITYRALWQESQAVATGLQ
                     ALGLQGGQAVVIMLPTGREYFLSFFGAILAGGIPVPIYPPARLSQLEDHMRRHRAILA
                     NCQAAVLVTVTEAKLLAHLLKAQVDTLQDIVTVEELCRGEPCTLPGLGPHDIAFLQYT
                     SGSTGDPKGVVLTHANLLANIRAMGEAVQAKPGDVFVSWLPLYHDMGLIGAWLGILYY
                     GAVLIVMSPLTFLAHPQRWLWAIHHYRGTLSAAPNFAYELCLRRIEDQHLEGLDLHSW
                     RAAFNGAEPVSPETVQRFSQRFARYGFQPQAMMPVYGLAEATLGVTIPPLGRACLFDR
                     IHREPFMDRGAAIPAGADDPTALCFVACGQALKKHEIRIVDPDGHELPDRREGRLQFR
                     GPSATSGYYRNPEATRRLFCGDWLESGDRAYIADGDVYITGRSRDIVIRAGRNIYPHE
                     LEEAVGGLRGIRQGRVAVFGSRDPRFQTERLVVIAETQETDPAALEHLRTKINSLAAD
                     LTGDPPEDIVLAPPGTVLKTSSGKIRRSASRELYERGALGKTRRPLWWQITRLAFGGL
                     RPLLQRMRRRAATLLYAGYAWTFTGTVVFVTWISVALLPRFEWRWGVMRRALRLLGGA
                     TRAACTIEGLNHLPPPDRSCVFVANHASYLDSYFLGAYLPRHPSFVAKAEFTRSFITR
                     VSLTRIGTEFVERFDQYKGMADTQQLIQKVAAGHSLLFFPEGTFTRMPGLLPFHMGAF
                     VVAAKAGVPVV"
     gene            complement(2667..3389)
                     /locus_tag="VE844_07970"
     CDS             complement(2667..3389)
                     /locus_tag="VE844_07970"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013220139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HZC01285.1"
                     /translation="MNKKSLLAFMFGSMVFTNSPAAEELTTDQQKISYAIGLQTAKNL
                     LQQGFQIDSKAFTQGIEDSLANKDPRVPVKELQAAFERQQAELNKERSVRAEKNREAG
                     KAFLAENKKKEGVQELPNGIQYRVLQEGKGNKPKLSDTVTVHYRGTLIDGKEFDSSYS
                     RGEPTSLQLTNVIKGWQEVVPMMPEGSKWQVVIPGDLAYGERGGGGGAIGPNETLLFD
                     IELVDVKPSADKSSEKKKSPEK"
BASE COUNT          783 a         1080 c         1090 g          779 t
ORIGIN      
        1 accacgggca ccccggcctt tgccgccacc acaaaagccc ccatatgaaa agggagtaac
       61 cccggcatgc gggtaaaggt gccctctggg aaaaacagca gcgagtgtcc agcggctact
      121 ttctggatga gctgctgggt gtccgccatc cccttgtatt gatcgaagcg ctccacaaac
      181 tcggtgccaa tccgggttaa agagacccgg gtgatgaatg agcgggtaaa ttctgccttg
      241 gccacgaaac tggggtggcg cggtaaatag gcccccagaa aataagaatc caggtagctc
      301 gcatggttgg ccacgaatac acaggaacga tcggggggtg gcagatggtt caagccctcg
      361 atggtacagg ccgcgcgggt ggcgccaccc agaagacgca gtgcccggcg catcactccc
      421 cagcgccatt caaagcgtgg taacaacgcc accgagatcc aggtgacgaa tacgactgtg
      481 cctgtgaagg tccaggcata accggcataa agcaaggtgg ctgcccggcg tctcatacgc
      541 tgcaggagtg gccgcaaacc accgaacgcg agccgcgtga tttgccacca caggggtcgc
      601 cgggttttac cgagagcgcc tcgttcatag agctcccggc tggcactgcg ccggatcttg
      661 ccactggagg tcttgagcac agtacccggt ggggccagga cgatatcctc cggggggtcg
      721 ccggtgagat cggcggcgag gctattgatc ttcgtgcgca ggtgttcaag cgctgcagga
      781 tcggtttcct gggtctctgc tatcaccacc agacgttcgg tctggaaacg gggatcgcgg
      841 ctcccaaaga cggccacacg cccttggcgg atgcccctaa gacctcccac ggcctcttcc
      901 aattcatgcg gatagatgtt gcgcccagcc cggataacga tgtcgcgact gcgccccgtg
      961 atataaacgt ctccatcggc gatataggcc cgatcaccgg attccaacca gtcaccgcaa
     1021 aaaagccgtc gcgtcgcttc cgggttgcga taataaccgc tcgttgccga ggggccgcgg
     1081 aactgtaatc gcccctcccg acgatccggg agttcatggc cgtcggggtc gacgatccgg
     1141 atctcatgtt tttttaaggc ttggccgcag gccacaaaac acaaggcagt tggatcatcc
     1201 gccccggccg gtatcgccgc gccgcggtcc atgaaaggtt cacggtggat gcgatcgaag
     1261 agacaggcgc gtccaagggg tggaatggtg acccctaagg tagcctcggc cagaccgtag
     1321 acaggcatca tggcctgtgg ctgaaatcca tagcgggcaa aacgctgaga aaaccgttgc
     1381 acggtctcgg gactgaccgg ctcggcgcca ttgaaggcgg cgcgccagga atgcaagtcc
     1441 aggccctcga ggtgctggtc ttcgatccgc cgaagacaga gttcataggc gaagttaggg
     1501 gcggcagaga gggtcccccg gtagtgatgg atcgcccaga gccagcgttg gggatgcgca
     1561 aggaaggtga gcggcgacat gacgatgagt accgcgccat aatataagat cccaagccat
     1621 gccccaatga ggcccatgtc atgatagagt ggcaaccaac tgacaaatac atcgccaggc
     1681 tttgcctgca ccgcctcgcc catcgcccgg atgttggcga gcaggttggc atgggtaagc
     1741 accacccctt tgggatcgcc ggtgctccct gaggtatact gtaggaaggc gatatcgtga
     1801 ggcccaagcc cggggagggt gcatggctct ccccggcaga gttcttctac ggtcacgatg
     1861 tcttggagcg tatcgacctg ggccttgagc aagtgtgcca gcagcttggc ctcggtcacc
     1921 gtgaccagca ccgcggcctg gcagttggcc aagatagcgc gatggcggcg catgtggtcc
     1981 tcgagttgag agagacgggc gggcgggtaa ataggtaccg gtatgccccc tgccaggatc
     2041 gcaccgaaaa agcttaaaaa atactcgcgc ccggtcggca gcatgatcac cacagcctgg
     2101 cccccctgga ggccgagcgc ttgcaaaccg gtagcgactg cctgtgactc ttgccagagc
     2161 gcccggtagg taatgacttc ctcctgcccc tgttcctgca cgatccgtat atgcggccga
     2221 tcgggttggg tattgacatg ccagtttaag acctcgacca gggtttgagc catctccggc
     2281 accgagcttc ctaccgccac cgcatcgatc ggggcgatct tcggtgtgac tgggcttttc
     2341 ccaggcgtag aggcgcgcca gagggcggcg agtaaatccc gcggcgtttc ggcatcggcg
     2401 aacacgtgct ccggcaagct cacgccaaag tggcgttcaa tccgggcaat caactccacc
     2461 ctggctagac tgtcgaggcc gatctcacgg ctgagcgtgc tgtccaaact tacagaacgc
     2521 ttgggtgttt gcgcaggatg gacctctgcc gccaattcac cgacgagttg cagcagcgct
     2581 gcacctctat cattgtccat cggttacccc cgttggaggg ttcagggcgc ttgcggtgat
     2641 tattccggga agcaggtccc tgcgagctat ttctcgggcg attttttctt ttcggaggat
     2701 ttgtctgcag aaggtttgac gtccacgagc tcgatatcga acagcaaggt ctcattcgga
     2761 ccgatcgccc cgccgccgcc gccgcgttcc ccataggcga gatctccagg gataacgact
     2821 tgccacttgg aaccttcagg catcatcggc actacctctt gccaaccttt gatgacattg
     2881 gtgagctgta acgaagtagg ttcaccgcgg ctgtaagagc tgtcgaactc cttaccgtcg
     2941 atcaaggtgc cccggtaatg cacggtgacg gtatcgctga gcttgggttt attacccttg
     3001 ccctcctgga gaacgcggta ttgaatgccg tttggcaatt cctgcacgcc ttcttttttc
     3061 ttgttttccg ctaaaaacgc cttaccggct tcccggttct tttcggcgcg cactgagcgt
     3121 tctttattga gctccgcctg ttgcctctcg aaggccgctt gcaattcttt cacgggcacc
     3181 ctgggatctt tgttggccag gctatcttca ataccctggg tgaaggcctt gctatcgatc
     3241 tgaaaacctt gctggaggag gttcttggcg gtttgtagcc caatcgcgta gctgatcttc
     3301 tgctgatcgg ttgtgagttc ttctgcagcc ggggagttcg tgaaaaccat agacccaaac
     3361 atgaatgcca ataagctttt tttgttcatg attcatcctt agtgtgtcga ttatgagcgt
     3421 gtgcccgaaa tgcccgaagc gcgggctagt taaggataaa aacccgcagg cccaccgtta
     3481 agagtatgga atcaaggcca aagtccgtat tcattgtccc gatctgaacg tcgggatgct
     3541 cgaagacata cttcgattca attcctagag ctatattata ggctacgaaa tattccacac
     3601 cagcaccaat tgatccggtc accgaccaat cgtcggcatc cttagcgcac ttctcttaac
     3661 acatgccaga gcgagcggat atttgagcgc agatctggaa gtaccacggt gatcgcaatg
     3721 ttctcgagcg ca
//
LOCUS       DASQSL010000777         1314 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_20289, whole genome shotgun sequence.
ACCESSION   DASQSL010000777 DASQSL010000000
VERSION     DASQSL010000777.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1314
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20289"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..776)
                     /locus_tag="VE844_07975"
     CDS             complement(<1..776)
                     /locus_tag="VE844_07975"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC01286.1"
                     /translation="METSQAVATSDTFAAQSFELTRWKKILSILQRVPILPLLILALL
                     VFTAVAADFLAPHNPEVGNLRYRYRPPVWQDRGTWEYILGTDHMGRDVLSRLIFGSRI
                     SLIVAVTAAVFAGVVGTTLGIMSGFIGGWVDQVIMRLTDAWLALPGVTFAILLAALVS
                     PSEWNIIIILGIVYWTRYARIVRGEVLSLKERDYVRLATVAGCSRAKIMWTHIMPNVA
                     NSVIVIATLQLGVAIISEATLSFLGVGVAPPKPAWGLMLA"
     gene            complement(766..>1314)
                     /locus_tag="VE844_07980"
     CDS             complement(766..>1314)
                     /locus_tag="VE844_07980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC01287.1"
                     /translation="TWFDNFGKIFAILGLSLPSFWVGLMLILTLSVYLNWLPSSGAEG
                     WKSLIMPAFSLGWVFTAAHMRLARSAMLEVLGSEYIKLARIKGLSENLVILKHAFKNA
                     VIPVLTLAGINMVLMVNVAVVVESVFAWPGVGRLLYEGISFRDFPVVQTTVLMGGLMF
                     VGVNLLVDILYAYIDPRIRYGN"
BASE COUNT          318 a          383 c          386 g          227 t
ORIGIN      
        1 tcggcaagca tcagtcccca ggcaggtttc ggtggcgcca cccccacccc taagaagctc
       61 agcgtggctt cggagatgat ggcaacaccg agctgcagcg tggcgatgac gatgacgctg
      121 ttagcgacgt tgggcatgat gtgggtccac atgatcttcg cccggctaca gccggccacg
      181 gtggccaacc gcacataatc gcgctctttg aggctcaaga cctcgccccg gacgatgcgt
      241 gcgtagcgcg tccaatagac gatgcccaag atgatgatga tgttccattc acttgggctt
      301 accagggcag ccagcaaaat cgcgaaggtg acccccggta gcgccagcca ggcatccgtg
      361 agccgcataa tcacttgatc gacccagccg cctatgaatc ctgacataat ccccagggtg
      421 gtgccgacga caccggcgaa gaccgccgct gtgaccgcca cgatcagaga gatccgcgac
      481 ccaaagatga ggcgactgag gacatcacgg cccatatggt cggtgcccag gatatattcc
      541 caggttcccc gatcctgcca cacgggtggt cgatagcggt agcgcaggtt gccgacttcg
      601 gggttgtgcg gggcgaggaa gtcggccgcg acggcggtga agaccaacag cgccagaatg
      661 agaaggggaa ggatcggcac acgttgcaat atcgagagga tcttcttcca cctggtcaat
      721 tcaaaggact gcgcggcaaa cgtgtcgctc gtggccacag cttgactagt ttccataacg
      781 aatcctcgga tcaatgtagg cgtacagaat atccacgagc agattgacgc caacgaacat
      841 caacccaccc atgagcacgg tggtctgaac aaccgggaaa tctcggaagg aaatgccttc
      901 atagagcagg cgtccaacgc cgggccaggc gaagactgac tccacgacca ccgccacatt
      961 gaccatcagc accatattga tgcctgccag cgtgaggacg gggatgacgg cgttcttgaa
     1021 cgcatgtttg aggatcacca ggttttctga gaggcccttg atgcgcgcta gcttgatgta
     1081 ttcactgccc aacacttcga gcatggccga acgcgccaga cgcatgtggg cggcggtaaa
     1141 cacccagccc agtgagaagg ccggcataat gagacttttc cacccctcag caccagagct
     1201 gggcagccaa ttgagataca ccgacagggt caggatgagc atgaggccca cccagaagct
     1261 gggaagcgat agtccgagaa tggcgaagat cttgccgaag ttgtcgaacc aggt
//
LOCUS       DASQSL010000778         1733 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_46890, whole genome shotgun sequence.
ACCESSION   DASQSL010000778 DASQSL010000000
VERSION     DASQSL010000778.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1733
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46890"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..331)
                     /locus_tag="VE844_07985"
     CDS             complement(<1..331)
                     /locus_tag="VE844_07985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018129570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HZC01288.1"
                     /translation="MQPMGKTDPADIEVHIPDRTMTIQWGDGHHSVYPFDLLRKECPC
                     AVCREARQATTNDPFNVVTSAVRPGEVTVTGAEQVGRYAVRFEWNDRHDTGIYSYEYL
                     RQICPCEA"
     gene            1508..>1733
                     /locus_tag="VE844_07990"
     CDS             1508..>1733
                     /locus_tag="VE844_07990"
                     /inference="COORDINATES: protein motif:HMM:NF024776.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC01289.1"
                     /translation="MRNALPPIREDEATLKERLQREHDGQKKSRLHMLYLLATRQAQD
                     RQQGARLLGIHRNTVGRWLARYAAGGLEALL"
BASE COUNT          324 a          572 c          453 g          384 t
ORIGIN      
        1 acgcttcaca cgggcagatc tgccgtaagt actcataaga gtatatgccg gtgtcgtgcc
       61 ggtcgttcca ctcaaaacgg acagcgtaac gccctacctg ctcggcgcca gtcaccgtca
      121 cctcccccgg tcttaccgcg ctcgtaacca cgttgaaggg gtcgtttgtc gtcgcctggc
      181 gcgcctcgcg acagacggcg cacggacact ccttgcgcag cagatcaaag ggatagacgc
      241 tgtgatggcc atccccccat tggatcgtca tcgtgcgatc ggggatatgc acttcgatat
      301 ccgccgggtc ggtcttgccc atgggttgca taagcccacc attccttctt tagaggcgtg
      361 atcggttgtt cttgccctca ccccaaccct ctccccgagg gacaaagcac cttctgtaag
      421 atatcagcat ctcgtgcaac gcctcgtgca cccatcagcg ccatggcttc tatctctgcg
      481 cagctcggat ggctcagtca cgctagatca cgacgattcc gaccggacac cagtccacgc
      541 cggcaggcat cttcggtcat tcccagtcct ggcacgcccc gtctatgatg caacatgatt
      601 gccctgtgtg gatgccaacg tgttcgtgac ctctcctttc agccttgtag ccgtctggcc
      661 cttccgtatc gatagctgga agcgatgtat tcatgtcgca gcccggcaca atcggccgtc
      721 ctcggactcg ccttgtatca ctgccggcgg ctggtgtcaa gcactgtagc gttttgcaaa
      781 ttcgctcggc ggcgcgctga gtgaggattc ttccgcagcc aggagcaccc catctagtcc
      841 atctttccga tgtaaatccc ggcggtttgc aaagtgcaca agctgcccac ctcacatttt
      901 tgcctaaact ttatttcccc tacgtaccgt tcttgcggtg cgacccttgc gatcggcaat
      961 gcgctatgcg aagcctcggt ttagccccgg agcagcacct ctccccaatc tcgtccccat
     1021 gcatccctca gggagcgcgc cagacctgac atcgggagag acaaacggca tgtatcttgc
     1081 gttactcctg gccaacagtg tcaccgatct acccccctgg aggaggagaa cccgatgaaa
     1141 cctgtacaac atgccgtgtc agcacagctc ccagtccccc tcacgcctct catggcccag
     1201 cccgtcgcgc tacgggagcc aagcgccacc ctacggcctg tcttagaaat tctagtttac
     1261 tcccctgggc ctgtgccctg ccgctgcggt cgctaccttt ctgaagattt tgacgggcgg
     1321 ctcttctgcc gtggctgtga gggaaccgac ccctctgatg tcactccacg cttaccatta
     1381 tgccattgtg caggataatc tttgcaagcc ctctactcac ggtatgatat gaattctgat
     1441 ttattagagt gcacaggtgt gctatcttcg ggggccactt ggcaacttcc cgcttggagg
     1501 gccacccatg cgcaatgctc tcccaccgat tcgcgaagat gaggccacgc tcaaggagcg
     1561 cctgcaacgg gaacatgacg gccagaagaa gtcccggtta cacatgctct acctgctggc
     1621 gactcggcag gcccaagacc gccagcaggg ggcacgtctg ctggggatcc accgcaacac
     1681 ggtcggccgc tggctcgcgc gctatgccgc tggggggctg gaggcgttgc tgg
//
LOCUS       DASQSL010000779         1225 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_143319, whole genome shotgun sequence.
ACCESSION   DASQSL010000779 DASQSL010000000
VERSION     DASQSL010000779.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1225
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143319"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1141
                     /locus_tag="VE844_07995"
     CDS             <1..1141
                     /locus_tag="VE844_07995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004074492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HZC01290.1"
                     /translation="ELNDNLKELVSRMKRMAYRPGPVRQVLIPKEDKPGAVRPLGISN
                     FEDKLVQKMVHKVLESIYEPLFLDCSYGFRPGRGCHDAIRALLDHLFRYEVQTIIDVD
                     VANFFGTIDPPLLLKMLSAKISDPRFLRYLARMFKSGVLVEGELRVSDEGVPQGSNCS
                     PILANIFAHHVIDTWFEETVKPHCAGRVALFRYCDDLVICCQYEQDAARIHKALAGRL
                     AKYHLTLNEEKTKLVPFSKRAQQDGRRARAFDFLGFTFYWGRSRRGAVVPKVKTSGAR
                     LRKKLKRVNAWARALRNRQRLPELWETFCAKLRGHIQYYGVSYNQVAVRTFVLKATRH
                     LFKWLNRRSQRKSFSWERFERFVQSHPLPAVRVYHSLLPSQWARE"
BASE COUNT          257 a          332 c          373 g          263 t
ORIGIN      
        1 ggaactgaac gacaatctca aagagctggt gagccggatg aagcgcatgg cgtatcggcc
       61 gggaccagta cggcaagtac tcattcccaa agaggataag ccgggcgcgg tgcgtccgct
      121 gggcatcagc aactttgagg acaaactcgt gcagaagatg gtacacaagg tgctggagag
      181 catttacgag cccttgttcc tggactgctc ctacgggttc aggccgggaa ggggttgtca
      241 tgatgccatt cgagcgctcc tggaccatct cttccgctac gaggttcaga ccattattga
      301 cgttgatgta gccaatttct ttggcacaat tgatccccca ctgctgctca agatgttgag
      361 cgcgaagatc agtgacccgc gtttcctgcg ctatcttgct cggatgttca agagcggggt
      421 gcttgtggag ggagagctgc gggtcagtga cgaaggggtt ccacaaggca gtaactgcag
      481 ccccattctc gccaacatct ttgcgcatca cgtgattgat acgtggtttg aagagacggt
      541 gaagccgcac tgtgcgggtc gggtggcgct ctttcgctac tgtgatgacc tcgtcatctg
      601 ctgtcagtac gagcaggacg cggcccgcat tcacaaagcg ctggccggac ggttagcgaa
      661 gtatcacctc acgctaaacg aggagaaaac taagctcgtc ccgttctcca agcgcgccca
      721 acaggacggc cgccgggccc gggccttcga ctttctcggg tttacgttct attgggggcg
      781 gtcgcgacgc ggggcggtgg tgccgaaagt gaaaaccagc ggcgcgcggt tgcgcaagaa
      841 actcaagcgg gtcaatgcct gggcacgggc cctgcgaaac cggcagcggc tcccagagct
      901 ctgggagaca ttctgtgcca agctacgggg gcatatccag tactacggcg tgtcatataa
      961 ccaagtggcg gtgcgcacgt ttgtgctcaa agcgacccga cacctgttca agtggctcaa
     1021 tcggcgaagt caacggaagt ccttcagctg ggaacggttt gaacggtttg tacagtcgca
     1081 tccgctcccc gccgtacggg tctaccattc gctattgcct tctcaatggg cacgtgaatg
     1141 attttgtctt gagcccattg ccttaatcgg gcacgatggg ttctaactgg ggaggggctc
     1201 aggtgactga cccctctacc atcta
//
LOCUS       DASQSL010000780         1048 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_112787, whole genome shotgun sequence.
ACCESSION   DASQSL010000780 DASQSL010000000
VERSION     DASQSL010000780.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112787"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            384..>1048
                     /locus_tag="VE844_08000"
     CDS             384..>1048
                     /locus_tag="VE844_08000"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01291.1"
                     /translation="MSESITVITLLLSALDRIDLQGVFDRDPYESRRRALPGTRLVKV
                     LVVYQMIGTEKLRGLIRTITEQAGLQAALGGTVALNTLSNGVRERDVGQMVEAWMRVV
                     QTYGPWLKRMGRKFARIAVIDVRLIKLSLLAYSWAEYRKRRGAAKMHAVLEWARGIPQ
                     QLVLTTGKVHDLRGAARLHWARHWTYIFDRAYLGFDFLSTLLEAGAHFVVRFKEGVGY
                     RIL"
BASE COUNT          239 a          268 c          301 g          240 t
ORIGIN      
        1 cctcacatta ccaaatgtta ttccggctaa acgagaattt acagtaaaac atgatcccac
       61 cacaggatct catatcagct aggagccgtg tgagttggaa actctcatgc acggttttga
      121 agtagaggcg cggagtggtg acattcccgt cgactataac aaataccaag accgcccaat
      181 cagaggatcg gttgcaagct tttacacgct ctgattttga aaatcttcat aatcagcatt
      241 atggcattca gccctgtccc atatgtaggc cgttgatata aaaacagttt attgaaaagc
      301 tttatgataa atgtagccgc tatgcgaacc tttcccccat caggcagact gacgaaagga
      361 attaaacttg aaggaggatt cgcatgtcgg agtctatcac cgtcatcacc ttgttgctct
      421 ctgccttgga ccgcatcgac ttgcaagggg tctttgatcg ggatccctat gaatcgcgcc
      481 gccgtgcgct gcctggcacg cgcctggtca aagtgctggt tgtctatcag atgatcggca
      541 ccgagaaact gcgcgggctg attcggacca tcaccgaaca ggctgggttg caagcggcac
      601 tgggtgggac ggtggcgctt aataccttgt ccaatggtgt gcgagagcgg gatgtcggac
      661 agatggtcga ggcctggatg cgggtcgtgc agacttacgg gccgtggctt aagcggatgg
      721 gtcgaaagtt cgctcgcatt gccgtgatcg atgtgaggtt gatcaagctc tcgctgctcg
      781 cttacagttg ggccgagtat cgcaagagac ggggggcggc caagatgcac gccgtgctcg
      841 agtgggcgcg cggcatccca cagcaactgg tgctcaccac cggcaaagtg cacgacttga
      901 ggggggcggc aagactgcac tgggccaggc actggaccta catctttgat cgcgcttacc
      961 tcggctttga ctttctaagc accctgctgg aggccggagc acacttcgtg gtgcgtttca
     1021 aagagggggt cggctaccgc atcctcga
//
LOCUS       DASQSL010000781         1002 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_195129, whole genome shotgun sequence.
ACCESSION   DASQSL010000781 DASQSL010000000
VERSION     DASQSL010000781.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195129"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..196)
                     /locus_tag="VE844_08005"
     CDS             complement(<1..196)
                     /locus_tag="VE844_08005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011682291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease N-terminal domain-containing
                     protein"
                     /protein_id="HZC01292.1"
                     /translation="MDINRFTEKAQEALSAAQSKAIRASHQQVDVEHLLSALLEQERG
                     LAASILTRAGAPVDVLKRRID"
     gene            complement(634..>1002)
                     /locus_tag="VE844_08010"
     CDS             complement(634..>1002)
                     /locus_tag="VE844_08010"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HZC01293.1"
                     /translation="FGHGGQDEGAWYAGAWSPPVDIYETDEALIMKAELPGFSKDDIS
                     IELKENTLIMRGERRRQDEVKEGNYHRMERVYGAFQRSFLLPTTVEQDKVKASYKDGI
                     LELHLPKVPAAQPKRIAVSA"
BASE COUNT          188 a          317 c          280 g          217 t
ORIGIN      
        1 gatcgatgcg gcgtttgagg acgtcgacag gggcaccagc cctggtcagg atggatgcag
       61 ccaggccgcg ctcctgttcc agtaaggcgc tcagcagatg ctccacgtca acctgctggt
      121 gactggcgcg tatcgctttg ctctgggccg cgctcaatgc ttcctgagcc ttttccgtaa
      181 atcgattgat atccattcag tcctccgtca ctgataatag ctgcagcgaa tggccggcgc
      241 atgcagggcc tctccggcaa ccgtgatttc atgtctggag tgagcttcaa acttttgcta
      301 gccggccttt gacgttcatc gctcatctac actcttgaaa agttgtaata aaggactcca
      361 cggccgcatg gccaatgaca gcttcgttgg ggaggtcccc cgttacaggg ttctcgccct
      421 tatgagttgg ggcagggcag tatgaggggc agaggcgctc atgcgatagg gccacgagta
      481 tcggccagca cgagcgccgg acccctcatt gccccggaag aggggggtca ggccttcagc
      541 tcatccggcc tcaaggaatg gccccgcgcc ctcatacagg cgcggggccc aatatcagca
      601 cgggaactgg gacacgtgtg aacggccgcg cgcttacgca ctcacggcga tccgcttcgg
      661 ttgcgccgcc ggaaccttcg gcaggtgtaa ctcgagtata ccatccttat acgaagcttt
      721 gaccttatcc tgctccacag tcgtgggcaa taggaaggag cgctggaacg ccccgtacac
      781 ccgctccata cggtggtaat tcccctcctt cacctcatcc tggcgcctcc gctcacccct
      841 catgatcaag gtgttttctt tgagctcgat actgatgtcg tccttcgaga atcccggcag
      901 ctccgccttc atgatcaacg cctcgtcggt ctcgtaaatg tcgaccggag gtgaccacgc
      961 gcccgcgtac caggcccctt cgtcttgacc gccgtgcccg aa
//
LOCUS       DASQSL010000782         3606 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_20303, whole genome shotgun sequence.
ACCESSION   DASQSL010000782 DASQSL010000000
VERSION     DASQSL010000782.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3606
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20303"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..472)
                     /gene="petA"
                     /locus_tag="VE844_08015"
     CDS             complement(<1..472)
                     /gene="petA"
                     /locus_tag="VE844_08015"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013034721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045275 - respiratory chain complex III
                     [Evidence IEA];
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HZC01294.1"
                     /translation="MSDINDKENDKEVDSKRRHFLTTAATVVGGAGVVVSAVPFVASL
                     QPSARAEAIGAPVEVDFGQLGPQQLFTEKWRGKPVWILHRTPEDLATLKDPSVKLRDP
                     ASAEPQQPAYTQNEYRSIKPEYLVVVGVCTHLGCAPKYVPAAAAASYDLGPKWKG"
     gene            complement(540..1622)
                     /gene="hisC"
                     /locus_tag="VE844_08020"
     CDS             complement(540..1622)
                     /gene="hisC"
                     /locus_tag="VE844_08020"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015281589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HZC01295.1"
                     /translation="MADTRSGQWIRPAIQALIPYHVPESSGLIKLDAMENPYSWPEAI
                     VGEWLQTLEAVPLNRYPDAEAGALKSGLRAYLSLSSATGILLGNGSDELIQMICLAVA
                     GSGRTLLTPEPGFSMYRVIATITGLNYVAVPLNPADFSLDMPAMLAAIERHRPALVMF
                     AYPTNPTGNLFDRNEVEQLIRASPGLVVIDEAYFNFAGETFIYGLSRYPNVLVLRTLS
                     KMGLAGLRLGIMVGHHNWLSEINKVRLPYNINVLSQVSGEFILRHAQVLEAQIRRICV
                     DREALYRGLKKLDNIEIWPSRTNFLLMRLAGRADQVFQGLKAAGILIKNLNGTHPLLW
                     DCMRVTIGTPTENRRFYEALKSLLKP"
     gene            complement(1651..2943)
                     /gene="hisD"
                     /locus_tag="VE844_08025"
     CDS             complement(1651..2943)
                     /gene="hisD"
                     /locus_tag="VE844_08025"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012637325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HZC01296.1"
                     /translation="MPIRRLKSSAPEFQHQLDKLLGIDKPMDATVMETVQGILEDVRR
                     RGDQALIEYTNRFDRRAIKAASELELPRERLNKARAELDPDLHEALRHAAERIQSYHE
                     RQKQASWTYVEEDGTVLGQQITPLERIGVYVPGGKAAYPSTVLMNVIPAKVAGVEEIL
                     MVAPAPQGELAPVVLAAAVIAGVDRVFTIGGAQAIAALAYGTETIPAVDKIVGPGNSY
                     VATAKAMVFGRVGIDMIAGPSEIVIVCDGQTDPDWIAMDLFAQAEHDEQARAIVLSPE
                     AAFLDAVEASIARQLPQMERAPIIRTSLASQGALIAVRDLDEAVEIVNQIAPEHLELA
                     VADPQALAAKIRHAGAIFMGPYTAEVLGDYCAGPNHVLPTGRTARFSSPLGVYDFQKR
                     SSLIQCSERAAQRLGQTASVLARAEGLTAHARSAEYRL"
     gene            complement(2964..3587)
                     /gene="hisG"
                     /locus_tag="VE844_08030"
     CDS             complement(2964..3587)
                     /gene="hisG"
                     /locus_tag="VE844_08030"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018954265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HZC01297.1"
                     /translation="MTLAVSKGRILKQCLPLLASMGIELRVDPEASRSLIIPTNRDHI
                     KLLVIRAVDVPTYVEYGAADLGIAGKDVLLEYQGEGLYEPLDLGIARCKLVLAGPVAP
                     KPRPGRLRVATKYVHTARRYFAEQGVQVEVIKLYGSMELAPLVGLADRIIDLMDTGNT
                     LRANGLVPFETIREISARLIVNKASMKMKNSAIKCLIKRFAAVDNSY"
BASE COUNT          793 a         1079 c          965 g          769 t
ORIGIN      
        1 ctcccttcca tttcggaccc aggtcatagg aggccgcagc ggcggcgggg acatatttcg
       61 gcgcgcatcc aagatgcgta cacacgccaa ccaccaccag gtattccggt tttatggatc
      121 ggtattcgtt ctgggtataa gcgggttgtt gaggttcggc agaagccgga tcgcgcagtt
      181 tcaccgaagg gtctttcagg gtagccagat cttcgggggt ccgatgcagg atccaaacag
      241 gcttaccccg ccatttttct gtgaacagtt gctggggccc aagttgacca aaatcgacct
      301 cgaccggcgc tccaatcgcc tcggcccgcg cgctcggctg caatgaagct acaaagggca
      361 cggcggatac caccacgcct gctccaccta cgaccgtcgc ggccgttgtc aagaagtggc
      421 gccgcttgct atctacctct ttatcattct ctttatcatt gatatcactc ataatctatc
      481 ctccctcatg acttcaccgt cttcgaccta tagttgaaat tataaccaaa aatgggggat
      541 tatggcttga gcaaactttt tagggcctcg tagaaccgac ggttttctgt gggcgttcca
      601 atcgttaccc gcatgcaatc ccacagtaaa ggatgggtac cgttcaggtt tttgatcagt
      661 attcccgccg ctttaagccc ttgaaacacc tgatcagcac ggcctgccaa ccgcataagc
      721 agaaaattgg tccggcttgg ccatatttcg atattatcga gcttctttaa gcccctgtac
      781 aaagcctccc ggtcgacaca tatccttcgg atctgagcct ctaaaacctg ggcatggcgg
      841 agtataaatt cgccgcttac ctgtgacagc acattgatgt tgtaaggcaa tcggacctta
      901 ttgatctcgc taagccagtt gtggtggcct accatgatcc ccaaacgcaa tccagccaag
      961 cccatcttgg acagcgtccg cagcaccagt acattcgggt aacggctgag accataaata
     1021 aaggtctcgc ccgcgaaatt gaaataggcc tcgtcgatca ccacaagacc cgggctcgct
     1081 cgaatcagtt gctccacctc attgcgatcg aacaaattgc cggtggggtt ggtgggataa
     1141 gcaaacatca ccagggccgg tcgatgccgt tcgatagccg ccagcatcgc cggcatatca
     1201 agactgaaat ccgctgggtt taaggggaca gctacatagt tgaggccggt gatcgtggcg
     1261 atgacccggt acatagaaaa ccccggctca ggtgtcagta aagtacgccc agagccggcc
     1321 acagccaggc atatcatctg gatcaactca tcggagccgt taccgagcag gatcccggtt
     1381 gcagaagaca agctcagata ggcccgcaag cccgacttga gcgcaccggc ctccgcatct
     1441 ggataacgat tcaacggcac cgcctccagg gtctgtaacc attccccgac gatcgcttca
     1501 ggccaggaat aaggattttc catcgcatcg agttttatca agcctgaaga ctcgggcaca
     1561 tgataaggaa taagcgcctg gatcgccggc cggatccact gtccactccg ggtatcagcc
     1621 ataggaactg gcgggggatc aggagattct ctagagacga tattcagccg agcgggcatg
     1681 ggcggtaagt ccttctgccc gcgccagcac cgaggccgtc tggccaagcc tttgggcggc
     1741 tctctcagag cactggatca gggaagatcg tttctggaaa tcgtagaccc caagcggcga
     1801 ggaaaagcgc gccgttcgcc cggtcggcaa gacgtgattt ggccccgcgc aatagtctcc
     1861 caagacctcc gcggtatagg gccccatgaa gatcgcgccc gcatggcgga tcttggctgc
     1921 cagggcttgg ggatcagcaa cggctagctc cagatgttcg ggggctatct gattcactat
     1981 ctccaccgct tcatccagat ccctcaccgc gatcaaggcg ccttgagagg cgagcgaagt
     2041 gcggatgata ggagcacgct ccatctgcgg caattgacgc gcgatgctgg cctcgaccgc
     2101 atccaaaaag gcggcttcgg gactcaacac gatcgcccga gcctgttcat cgtgttcggc
     2161 ctgggcaaaa agatccatgg cgatccagtc gggatcggtt tgcccatcgc agacgatgac
     2221 gatctctgaa ggacctgcga tcatgtcgat acccacccta ccaaagacca tggccttggc
     2281 cgtcgctaca tagctattgc cgggaccgac gatcttatcg accgccggga tcgtttcagt
     2341 cccataggca agcgcggcta tggcctgggc accgcctata gtaaacaccc gatcgacccc
     2401 ggcgatcacg gcggcggcaa gcaccacagg cgctagctca ccttgggggg ctggagccac
     2461 catgaggatc tcctccacgc cggcgacttt tgccggtatc acgttcatta acacggtaga
     2521 ggggtaagcc gccttgcctc ccggcacata gacaccgatc cgctccaggg gggtgatctg
     2581 ttgccccaac acggtgccat cctcctcgac ataggtccaa gacgcttgct tttggcgctc
     2641 gtgatagctc tggatacgct cggctgcgtg tcttagggct tcgtgcaagt ctggatcgag
     2701 ttccgcccgg gccttattca atcgctccct cggcaattca agttcgctgg ctgcctttat
     2761 ggcacgccga tcaaaacgat tggtgtactc gatcagcgcc tgatcacccc ggcggcgtac
     2821 gtcctcgagg atcccctgca cggtctccat cacagtcgca tccatgggct tatcgatgcc
     2881 tagcagttta tcgagttggt gctgaaattc aggggcgcta ctcttcagac gtcgtatagg
     2941 catgttcaat cctcagaaag atttcaatag gaattatcca cggcagcaaa tcgttttatc
     3001 aagcacttga tcgctgaatt cttcatcttc atcgaggctt tatttactat caaccgcgcg
     3061 ctgatctccc tgatcgtctc gaagggcaca aggccgttgg ctctgagcgt atttccggtg
     3121 tccatgaggt cgatgatacg atcggcgagc cccacgagcg gcgcaagctc cattgagccg
     3181 tagagcttga tgacctcgac ctgcacccct tgctcggcaa aataacggcg ggccgtatga
     3241 acatacttgg tggccacccg taggcgcccc ggcctgggct tgggcgcgac cggacctgcg
     3301 agcaccaatt tacaccgggc aatgccgaga tccaggggct catacagccc ctccccctgg
     3361 tattccaata atacatcctt gccggcgata ccgagatccg ctgccccgta ttctacgtaa
     3421 gtaggcacat ccactgcccg gatcaccaaa agctttatat ggtcgcggtt agtggggatg
     3481 ataaggctgc gagaggcctc gggatccacc cgcagctcaa tccccatact ggcgagcaag
     3541 ggcaagcact gcttcaggat ccggcccttg gacacggcca gcgtcagcgg agtgtcgagg
     3601 aaaccc
//
LOCUS       DASQSL010000783         1889 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_74553, whole genome shotgun sequence.
ACCESSION   DASQSL010000783 DASQSL010000000
VERSION     DASQSL010000783.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1889)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1889)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1889
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74553"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            208..579
                     /locus_tag="VE844_08035"
     CDS             208..579
                     /locus_tag="VE844_08035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012385187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase family
                     protein"
                     /protein_id="HZC01298.1"
                     /translation="MPQLVEMDRHVSLFEQMEQQQVGSVVLINTFTVEPEEADQLQQA
                     WASDAAFMKQQPGFISTQLHRGIGGSCVFFNYAVWESVEDFKRAFSNPEFQAKMKDYP
                     PSAAASPHLVRKVAVAGICVD"
     gene            690..1082
                     /locus_tag="VE844_08040"
     CDS             690..1082
                     /locus_tag="VE844_08040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01299.1"
                     /translation="MTTSLHEWLLRRPPTEGSLCCGRRDVQGTGRARTFSVSLSSVKR
                     YLDKARRGESLAPKKSPGSPPKLDDKATKLLEEDLKEHPYATLQERRDYIEALSGISV
                     SRSTMCRAIARIGPTRKKGDDSPQSVTS"
     gene            1010..1654
                     /locus_tag="VE844_08045"
     CDS             1010..1654
                     /locus_tag="VE844_08045"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC01300.1"
                     /translation="MPRHSPHRPHQEKGGRLATERNELERAAWRVMVAAEVEPERLLF
                     VDECGTHTSIGPIYGYAPRGQRLRLSVPRKRGKNTTLLSSMSLEGMGPSLTVEGATTA
                     VVFEAYVEQVLAPSLCPGQVVVMDNLGAHRPKRVRELIEGRGCDLVYLLAYSPDYNPI
                     EEAFAKIKNLLRKAAARTKEALVEAIGAALSAISAQDARGFFEHAGYRPTGHLL"
BASE COUNT          418 a          539 c          580 g          352 t
ORIGIN      
        1 cttagatgca tcttagcggg aagccctcct cagcgataca taagaggaca cgtagagcgg
       61 tgcaggcgaa gttcgcagaa ttcctgtccc acgcactcct ggggtgaaaa gctcaaatag
      121 gcttccgaga gtgcgcactg ctcccgagga tggcatgatg ctcttacaat gcacaggatg
      181 gacgatctcc agaggaggca aacagagatg ccacaactcg ttgagatgga taggcacgtg
      241 tcgctcttcg agcagatgga gcagcagcag gtcggctcgg tggtcctgat caacaccttc
      301 acggttgagc ccgaggaggc agaccaacta caacaagcct gggcgtctga tgccgcattc
      361 atgaagcagc agcccggttt catctccaca cagcttcacc ggggcatcgg aggaagttgt
      421 gtgttcttca actacgcggt gtgggaatcg gttgaggact tcaagcgagc attcagcaac
      481 cctgagttcc aggcgaagat gaaggactac ccgccaagtg cagcagcatc gccccacctg
      541 gttaggaagg ttgcggtagc tggcatctgc gtggactgag ttagggagta gttagaccga
      601 gcggcccagg tccttcgccc aggtccttcg ccccggttct ccttctgtgc gctcaacttc
      661 ttacagcatg ttgcggtaga gatgaaccga tgacaacatc actacatgaa tggctactcc
      721 gaagacctcc gacagaaggt agtctctgct gtgggaggcg ggatgtccaa ggcacaggca
      781 gagcccgcac cttctcagtg agcctctctt cggtcaaacg ctacctcgac aaggcccgcc
      841 ggggagagtc tctggctccg aagaagagcc ccggctctcc tccgaagctg gacgataaag
      901 ccaccaagct cttggaggag gatctcaagg agcatcccta tgccaccctt caggagcgcc
      961 gcgactacat agaagcccta agcgggatct cggtaagccg ctccaccatg tgccgcgcca
     1021 tagcccgcat cggccccacc aggaaaaagg gggacgactc gccacagagc gtaacgagtt
     1081 agagagggcg gcctggcgag tgatggtggc ggctgaggtc gagccggaga ggctgctctt
     1141 tgtggacgag tgcgggacgc atacctccat tgggcctatc tacggctacg caccaagagg
     1201 ccagcgatta cggctttcgg tgccgcgcaa gcggggcaag aacacgacct tgctctcaag
     1261 tatgagtttg gaggggatgg gaccatctct gacagtggag ggagcgacca ctgctgtagt
     1321 cttcgaggct tacgtggagc aggtgctcgc tccgagcctt tgtccaggac aggtagtggt
     1381 catggataac ctcggcgccc acaggccaaa gcgggtgagg gagctcatcg aggggcgagg
     1441 ttgcgatctg gtgtacctgc tggcctactc ccctgactac aacccgattg aagaggcgtt
     1501 tgccaagatc aagaacctcc tacgcaaggc tgcggccagg accaaagagg cattggtaga
     1561 ggcgataggg gcggcgctct ctgcgatcag tgcccaagac gcccggggct tctttgaaca
     1621 tgctggatac cgccctacgg gtcacctact gtgaaacgtg ctgtcagggg tgaaatcggc
     1681 agaggcagcg ttggcagggt ttcccgaggg gcacggcccg atagcccgtg attggaagga
     1741 tggcgcgcag atgccggtaa gcttgcactc gggtcggact ttctacttcg atcccgaacc
     1801 tccgcccaag cggccgatcg gctgcctctt gcgccaccga aagtagttcg acctcaagga
     1861 tccctaaacc tggcccgagc cccactcac
//
LOCUS       DASQSL010000784         1088 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_101274, whole genome shotgun sequence.
ACCESSION   DASQSL010000784 DASQSL010000000
VERSION     DASQSL010000784.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101274"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(220..765)
                     /locus_tag="VE844_08050"
     CDS             complement(220..765)
                     /locus_tag="VE844_08050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01301.1"
                     /translation="MRRTVILVAVVAATLVVASGVAVAVATKLSGGAINQVKVAQETT
                     ATTTTSVSFVDLPGASVRVSVPSGEKGLLLARFSAESACYNTTPGSNTNDLWCGVRIL
                     AVKDGTTTERPLQPDEDFAFDSTDKGTESSASWEGHATDRSLLVGPGIYTVKVQYMTN
                     SSSATFRLDDWHLTVEKARAS"
BASE COUNT          223 a          328 c          295 g          242 t
ORIGIN      
        1 tcctatggga cccctgtcgc acgcttccgg aaggcggaga gcatcttagg atcccttaga
       61 agcctcgagg ctcattcaaa cacatgaatc tttatgcgac accggctttg caccaaaatt
      121 cgcttctgca caaaaattgg gaactctgca tcaaaattag gggccggagc ctcttatagg
      181 accccggccc ggtcgggttg acttcgttct cttctcgggc taagaggccc tcgccttctc
      241 gaccgtcagg tgccagtcat cgagccggaa ggtggcgctg gagctattag tcatgtattg
      301 gacttttaca gtgtatatcc caggcccgac aagcagcgag cggtcggttg cgtggccctc
      361 ccatgaagcc gagctctctg tacccttatc cgtactgtcg aaggcgaaat cctcgtccgg
      421 ctgtaggggc ctttccgtag tggtgccgtc cttcacagcc aaaatcctta ccccacacca
      481 aaggtcgttg gtgttgctac cgggagtggt gttatagcag gcagactcgg cggagaagcg
      541 cgccaggagc agccccttct ctcccgacgg caccgagacc ctgacggagg caccaggcaa
      601 gtcgacgaag ctcaccgagg tggtggtagt agccgtagtt tcctgggcaa ccttgacctg
      661 gttgatggca cccccgctca gcttcgtggc caccgccaca gccacgccgc tcgccacgac
      721 cagcgttgct gccacaacag ccactaagat aaccgtccgc ctcatgagga ggctcccttc
      781 ctataggtgg ggcggagcgt cccccgcccc gtaaatgtag ccacaggccg tagcatagca
      841 aggtttagta acaagcgtat cactcaaatg gactactctt ggaaacttct tcgtcggagc
      901 ggcgctacga cgattcttcc tgctgccgcc tcttggtaca caatctcacg ttcttatcca
      961 gatgatgcac gcgcacggcg tcgagccgat ttttggtgca gaatcccggc ctgcactaaa
     1021 attgctctct tagcggctat tttggtgcaa ggccgattca gacgcgattt ttggtgcaag
     1081 gctaggtg
//
LOCUS       DASQSL010000785         1154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_86557, whole genome shotgun sequence.
ACCESSION   DASQSL010000785 DASQSL010000000
VERSION     DASQSL010000785.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86557"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(439..>1154)
                     /locus_tag="VE844_08055"
     CDS             complement(439..>1154)
                     /locus_tag="VE844_08055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017328921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01302.1"
                     /translation="RHPSETILMSVKDESCCDSAGVKLSPYQAFCKLSIGVENGRENT
                     QPFEDTFKAETWDHIGDMPLFYNFAAAPPGTNPASIAPALTSETTLGELRGKVALLRR
                     FKASQDVGADLTYWPENQRFRSPTPPFYDVEDQYQNPGDDDKFDFVTAHLAEAERSDP
                     NDLYITFSSAVGLTARGSEYSKTINPRLNDYLVKLRHGRVGIIVMDFFEHPRELVSNV
                     IKTNFPTGAIGGQGGRYTA"
BASE COUNT          255 a          306 c          315 g          278 t
ORIGIN      
        1 ccgaggtgtt gtaccgggta agcatatgac ggcggcatca caccactagc tgcgcggtgc
       61 caccggttcc gcctcgcctg tcacgtgatg tcgacggggg atgtcgtcgt gtctgaccaa
      121 aaacatctcg accaccggcg cacaacagtg agtcgtcgtt gcctttaacg atgtcggatg
      181 aagcgcttct gctgctgcag gaggaccgct cgccgtggaa catgtagtcg agctcggtgc
      241 tgaccatcgc ctggacgagg cgacctttcg gcaggcggtg ctgtgctgct gctgatgtca
      301 ccgctgaccc gggctcggct ggcaccgaca cgcaacggtg agacgtctta tcaatctatc
      361 aatgggattt ccccgatgag gtggatcgag atcgctattc atggatggaa catcgtgatc
      421 actaataggc aagactgatc acgccgtgta tctcccgcct tggccgccta tcgctcccgt
      481 cggaaagttc gtcttgatca cgttagacac cagttctcga ggatgttcaa agaagtccat
      541 cacaataatt ccaacgcgcc catgccgtaa cttgacgaga tagtcgttga gacgaggatt
      601 tatcgttttt gaatattcgc tgccgcgcgc cgtcaggcca acggcgctgg aaaacgtaat
      661 gtataaatca tttggatcac tacgttcggc ttccgctaag tgggcggtga cgaagtcgaa
      721 cttgtcgtcg tctccaggat tctgatattg atcctcaacg tcgtagaatg ggggcgttgg
      781 acttctgaag cgctggtttt ctggccaata agtgaggtcg gccccaacgt cttggctggc
      841 cttgaatctg cgcagcaacg cgaccttacc tcgaagttct cccaatgtgg tttcagacgt
      901 gagtgctgga gcgatagatg caggattagt accaggaggg gcggcagcaa aattgtaaaa
      961 tagcggcatg tctccgatgt gatcccacgt ttccgcttta aatgtatctt caaacggttg
     1021 agtgttctcc cggccgttct ccacccctat ggacaactta caaaaagctt gataagggga
     1081 gagcttcaca cctgcgctat cacaacaact ctcgtccttg accgacatta aaatagtttc
     1141 ggaaggatgc cgct
//
LOCUS       DASQSL010000786         1264 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_157018, whole genome shotgun sequence.
ACCESSION   DASQSL010000786 DASQSL010000000
VERSION     DASQSL010000786.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1264
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157018"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            491..880
                     /locus_tag="VE844_08060"
     CDS             491..880
                     /locus_tag="VE844_08060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012259070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEPN domain-containing protein"
                     /protein_id="HZC01303.1"
                     /translation="MAERSKDWFRQAEADLRHARNARAAGDYDWAAFASHQAAEKAIK
                     AVFQKLHQDAWGHVLSFLLAALPNAQRPDRALIDRAKQLDKHYIPTRYPNGFERGAPT
                     DLYTLQEADEAIANAEAIIEFCRGQIG"
     gene            852..1226
                     /locus_tag="VE844_08065"
     CDS             852..1226
                     /locus_tag="VE844_08065"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012259069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HZC01304.1"
                     /translation="MNSVVVKSVDEALIRRCMDEYASRLFSTHAEVEEVIVFGSFAEG
                     CYGPGSDLDVFIALSTSDKPVHERIPELLPDGFPVPLDLFPFTREEIAARRPSALLDA
                     VGSSTWRYKRHLEPKAGRGGKR"
BASE COUNT          287 a          341 c          353 g          283 t
ORIGIN      
        1 tggacatttg aaagtatgcg taattgcatc gaaaagcggt agtgcgtcct aacgaataga
       61 atttgggcca tgacaatcaa tagaacgaaa aattaccctt ctcaagccgc agccgggcca
      121 actggttctg aatcggtttt cggaatacgg ccttgcggcc tattccgctc tacggccctt
      181 ggccggtatg tcgtcacttg agtactccta ccagtggctt cttcccgttg cctcaagaat
      241 acctgttggt gggcgccatg gagtgataag gggttctcaa tcactctagc tcatccaccg
      301 aacgctcgat gacccgggga tctgtctgga cagcagtcga aaaataggcg taaataggcg
      361 ttggatttcc tattcttttt cccaggtgtc cttacggtgg gtctcgactt gtacgggcac
      421 agcagctgtt aagacagctc ctcaggcggc gctgcatcat gctgccttgc caaccaggat
      481 ccagttaata gtggcagagc gttcgaaaga ctggttcaga caagcggagg cagacctgcg
      541 gcatgcacgc aatgcacgcg cagctggtga ctatgattgg gctgcgtttg cctcacatca
      601 agccgccgaa aaggccatta aggccgtgtt ccaaaagctc catcaggatg catggggaca
      661 tgtgctcagc ttcctgctcg cggccctgcc aaatgcacag cggccagatc gtgcgctcat
      721 cgaccgagct aaacagcttg acaagcatta catcccgact cgttatccga acggtttcga
      781 gcgcggagcg ccgaccgatc tgtacactct ccaagaagcg gacgaggcga tcgcaaacgc
      841 ggaggccatc attgaattct gtcgtggtca aatcggttga cgaggcgctc attcggcgat
      901 gcatggatga gtacgcatca cgcctgttct ccacccacgc ggaggtcgaa gaggtgattg
      961 tgttcggatc cttcgccgag ggctgctatg ggcccggtag cgatctagat gttttcatcg
     1021 ccttaagcac gtccgataag cccgtgcatg agcgaatacc ggagctgttg ccggatggct
     1081 ttcctgtacc gctggatctg ttcccgttta cacgagagga aatcgcagcc cgcagaccct
     1141 cagccctcct ggatgcagtg ggctctagca cgtggcgcta caaacgccac cttgaaccga
     1201 aagctggcag aggagggaaa agataatgac gcattgactt gtgagtgcgc ggtcttaaaa
     1261 gggt
//
LOCUS       DASQSL010000787         3574 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_6436, whole genome shotgun sequence.
ACCESSION   DASQSL010000787 DASQSL010000000
VERSION     DASQSL010000787.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3574
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6436"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(61..3513)
                     /locus_tag="VE844_08070"
     CDS             complement(61..3513)
                     /locus_tag="VE844_08070"
                     /inference="COORDINATES: protein motif:HMM:NF017197.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF748 domain-containing protein"
                     /protein_id="HZC01305.1"
                     /translation="MKQLAQLVKNRWLLTIASALAVYALVGFLLIPSLVKHYVPGIAA
                     EQLKRQASVAEVRFNPFLFTFEVKDFSFKEADGEPILSLQRLFVDFELKSLVHWAWTF
                     ADLRLEGPLLNLVIDQKGKLNLAKIADTLTKSDEPPSPNEALPRLLLEHMALVNGSVK
                     FTDHSRATTATETVSPINLELDAISTLPESHGNYVVSAKFVGGGALEWRGKLSLNPIF
                     SQGEVRLEGFKLATPWNFIRDQLNLAKPAGEIGLTARYRFNYQQGKTDLTINGIAANL
                     AGLRLVASDAADPILILDKIKLTDTSFDLASRTIKIPTFAIQNGHVNVSVDERGEMNW
                     QKLAKTGTASGTRQPAQQLLAKSVAQVSAGAPVAPWQLRVEAFKVADIGITYTDASRH
                     SPFVVSVGAFGLDLSAKAETGAGSPKVRIEDLAANLNRIALSERGNKESLVNWDALTI
                     DGGQLNLEKQDLTLQQVALKGGGAKILRDANGAIHLAEVFAPKGQGKAPEKITAPATD
                     KKNEVKPWHLTLKTFALQGFRLALSDRSVSPEIAYELEDLNIALKDITNDGKTPISFN
                     AGLKVKQGGTASASGNVSPGGDRAHAKVQITRINLKPLHPVIGQIAALRLESADLSTQ
                     LQVDYHQGKAGPSVKATGGLGVSGLLLNEVKTGKRFLSWKILNAEGINFGLESNKLSI
                     KEVRIVEPGTKIEIFKDRTTNIAALFQGKSTVPAGKKSPKTAKPKRDAAKPLLVTVDR
                     LRVDKGIVDFSDLSLVIPFATRIHHFEGAAMDISMAPSSRTTLKFEGRVDDYGQANVD
                     GSLSPLQHKTFSDIKVVFRNVAMPSLSPYSGTFAGRKIRSGKLNMDLEYKVENSRLKS
                     DNKIVLEQFTLGERIESPNAVSLPLDLAIALLTDSQGKINASVPVEGDLDHPDFGYGK
                     LIWQAIVNLITKAVTAPFRALASVVGGSEEDIGVVLFEPGSDAIPPPEHEKLKKVAQA
                     LIQRPKIKLTVLGGYDPKLDGGALRSLQVRRALAQKLDVRLQPGEDPGPVAFSSAKSQ
                     RALEDLAAERGGRSALDDFQANYEKASGKRVKRIGAISAFLGRASEDQDFYEQLFKHL
                     VDIAPLPEADLKALADRRSKAIVKELTSQLGLDRARVAAGKIEPASEASEGNVPTKLD
                     LGVR"
BASE COUNT          712 a         1000 c         1005 g          857 t
ORIGIN      
        1 taggtgcgtt cgaccaatca ggtaaacttg gaactactga ccttcgttct aagttcccga
       61 tcagcgcacg ccgaggtcga gcttcgtcgg aacgttgccc tcactcgcct cggaagcggg
      121 ctcgatcttg ccggcggcga cccgtgcccg atcaagacct aactgactgg tcagttcctt
      181 gacgatagct ttgctgcggc gatcggccag ggctttgagg tctgcttccg gcaatggcgc
      241 aatgtccacg aggtgcttaa atagctgctc gtaaaaatcc tggtcttcgc tcgctcgacc
      301 caggaaagct gagatcgcgc cgattcgctt gaccctcttg ccgctcgctt tttcgtagtt
      361 ggcctgaaaa tcgtcaaggg cactacgccc gccgcgctcg gcggccagat cctccagcgc
      421 ccgctggctc ttggcactgc tgaatgcaac cgggcccgga tcctctccgg gctgcaatct
      481 gacgtcgagt ttctgggcca acgcccgccg cacttgcagc gacctgagcg cgccgccatc
      541 gagcttcgga tcatatccac caagcaccgt cagcttgatc tttggacgtt gaatcaaggc
      601 ctgcgccact tttttaagct tctcgtgctc ggggggcggg atcgcatcgc taccgggctc
      661 gaacagaact accccgatat cttcttcgct gccgccgacg acagaggcca gggcacggaa
      721 cggtgcggtg acagctttgg tgatcagatt gactatggcc tgccagatta atttgccgta
      781 accgaagtcg gggtggtcca ggtcaccttc cacgggcact gacgcattga ttttcccctg
      841 gctatcggtc agcagtgcga tcgcgaggtc gagcggcaac gagactgcat tagggctctc
      901 aatgcgctct cccaaggtaa attgctcgag cacgatctta ttgtcgcttt tgagcctgct
      961 gttttcgacc ttgtactcca gatccatgtt gagcttcccg gatcggatct tgcgtccggc
     1021 gaaggtccca ctgtagggtg aaagcgaggg catcgcgacg ttgcggaata ccactttgat
     1081 gtcgctgaac gtcttatgtt gtaatggact caaagatccg tccacgttag cctggccata
     1141 gtcatcgacg cgaccttcaa atttgagcgt ggttcggctg gatggagcca tcgagatgtc
     1201 catcgccgca ccctcgaagt ggtggatacg tgtggcgaaa ggaatgacga ggctcaagtc
     1261 actgaaatcg acgataccct tatcgacccg caaacgatcc acggttacca ggagtggctt
     1321 ggccgcgtcc cgcttcggtt ttgcggtctt tggagacttc tttccggcag gcaccgtgct
     1381 ctttccctgg aagagggcgg cgatgtttgt ggtgcggtct ttgaagattt cgatctttgt
     1441 acccggttcg acgatccgca cttccttgat ggaaagcttg ttcgactcga ggccaaagtt
     1501 gatgccttca gcgttcagta tcttccagga aaggaagcgc ttgccggttt tgacttcgtt
     1561 gaggagcagc ccactcacgc ccaacccgcc cgttgccttg acagacggcc ctgctttacc
     1621 ctggtgataa tcaacctgca gctgggtcga caggtctgcg ctctcgagcc taagcgccgc
     1681 gatctgaccg atgactgggt gcagcggttt taaattgatc cgggtaatct ggaccttggc
     1741 atgcgcgcgg tcgccgcctg gcgatacatt ccccgaagcg cttgcggtgc cgccctgttt
     1801 gaccttgagc cctgcgttga aggaaatcgg tgtcttaccg tcgtttgtga tgtccttgag
     1861 ggcaatgttg agatcctcca gctcataggc gatctcgggt gatacgctgc ggtcactgag
     1921 tgccaggcgg aaaccctgaa gggcgaacgt tttcagcgtg agatgccaag gcttaacctc
     1981 gtttttctta tccgttgcgg gggcggtgat tttttcggga gccttgcctt gacccttggg
     2041 cgcgaatacc tcggcgaggt gaattgcgcc atttgcatca cgaaggatct tggcaccacc
     2101 acccttcagg gccacctgct ggagggtgag atcttgtttc tcgagattaa gttgtccccc
     2161 atctatcgtc aacgcatccc agttcacgag cgactctttg ttgccgcgct cactgagcgc
     2221 gatgcggttg aggttggccg cgagatcctc gattcgcacc ttgggtgaac cggcgccggt
     2281 ttccgccttg gcgctgagat caagcccgaa cgccccaacc gacactacaa agggcgaatg
     2341 gcggctcgca tcggtgtacg tgattccaat atcagctacc ttgaacgcct cgactctcaa
     2401 ctgccatggt gccacgggtg cgccggcaga tacctgagcc acggacttgg caaggagttg
     2461 ctgagcgggt tgtcgggtac cgctcgcagt tcccgttttt gccagcttct gccaattcat
     2521 ctcgcccctc tcgtccacgg acacattcac atgcccgttt tggatagcga aggtcggaat
     2581 cttaatcgtc cggctcgcca aatcaaaact cgtatcggta agcttgatct tgtcgaggat
     2641 aaggatcggg tccgcagcat cggaggcaac gagccgtaac ccagctagat tggctgcgat
     2701 gccgtttatg gtcagatcgg tcttgccctg ctggtaatta aaccgataac gcgctgtgag
     2761 gccgatctcg cctgccggct tcgccaagtt cagttggtct cgtatgaagt tccatggtgt
     2821 agcgagctta aagccttcga gccgcacttc gccctgcgaa aatatcggat tcagcgacaa
     2881 cttgcctcgc cattcgagtg ccccgccgcc cacaaatttc gcgctgacca cgtaattccc
     2941 atggctttcg ggtaaggttg agattgcatc gagttccaga ttgatggggc tgaccgtctc
     3001 tgttgctgtc gtagccctgg agtggtcagt gaattttacc gatccattca ccaaagccat
     3061 gtgctccagc aggagacggg gcagggcttc attgggcgag ggaggctcgt cggatttggt
     3121 cagcgtatcg gcgattttgg ccaagttaag cttccctttc tggtcgatga ccaaattcag
     3181 caatgggcct tcaagtcgga gatccgcaaa agtccatgcc caatggacaa gacttttaag
     3241 ctcgaaatcg acgaacaggc gttgaaggct aaggattggc tcgccgtctg cctccttgaa
     3301 ggaaaaatcc tttacctcaa aggtgaagag gaagggatta aatcttactt cagcgacgga
     3361 ggcctgtcgt tttaattgct cggcggcaat gcccggaacg taatgcttaa caagagaggg
     3421 tatgagcaaa aaaccgacaa gagcatagac cgccagtgca gatgcaatcg tcagcaacca
     3481 tcggtttttt accagctgag cgagctgctt cattgtcttc ggcctcagtg atcagagtta
     3541 gattactagg cctaagcagg agttgctaga ggag
//
LOCUS       DASQSL010000788         1075 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_6445, whole genome shotgun sequence.
ACCESSION   DASQSL010000788 DASQSL010000000
VERSION     DASQSL010000788.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1075
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6445"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..283)
                     /locus_tag="VE844_08075"
     CDS             complement(<1..283)
                     /locus_tag="VE844_08075"
                     /inference="COORDINATES: protein motif:HMM:NF013540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZC01306.1"
                     /translation="MRPLEGVKELRERRMLSQQELADRAGVSLFTVQRIERREGSVRP
                     KTGRAIAAALGVGVEDLLGKAQAPLPNFEVERRDAIDVVIAAARQQAEQD"
     gene            complement(843..>1075)
                     /locus_tag="VE844_08080"
     CDS             complement(843..>1075)
                     /locus_tag="VE844_08080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01307.1"
                     /translation="PTEQRVETLPAQVGRNFRRQAGEQAAERLGPMALQGEEVLQPID
                     DLLDDLPSARRPASVGRTPAMVAALAPQLNPR"
BASE COUNT          197 a          330 c          305 g          243 t
ORIGIN      
        1 tgtcttgctc cgcctgttgt ctggcagcag ctatcactac gtcgatggca tcgcgccgct
       61 cgacctcaaa attaggcagc ggcgcttgtg cttttcccaa gaggtcttcc acaccgactc
      121 ccagcgctgc ggctatcgcg cgtcccgtct tgggccggac gctaccctct cttctctcaa
      181 tacgttggac cgtaaacaga gaaacgccag cgcggtctgc aagctcttgc tgtgacagca
      241 tccgacgttc tcgtagctcc ttcacgccct ctagtggcct caccaatacc tcctcgctgg
      301 agtcattgag gtaactataa agtagaaatc aagtaatagt ctagtaaacg gggggcgcgg
      361 tttcccagga cacaagatgt agcgctaagt gggtagggct cttacgataa gtaggggtta
      421 gtcaccgacc agctcggcag gatccacctc gagcgtccgg gcgagcttcc gcagcgtggt
      481 catgcgcggc tcgatctcgt cgcgctctga ccctttccgg caactccatt cgcgctcaaa
      541 ccgtacacac caccggtacg aggggccagc tgcacaggta ggaagctctt cgcaccactg
      601 tctgaccggg gttctcctct gggtcccggc cttttttgtg ctttattcat caaaattcgc
      661 ataagtctta ttctcggaag tccgtatgcg gggtgttgga tactgggaat tctaatcttc
      721 cgtgcggaag tggatctagg cagttccgcc ccgctcgtcc aggtatcttg atacagcgat
      781 ggatggatat tcgccgttct gcatggcacg cggcggccaa cattgggggc cacgtgagcg
      841 cttcatcgcg gattcaattg cggggccaac gccgccacca tcgccggagt ccgcccgacg
      901 gacgctgggc gtcgggcaga cggcagatca tcgagcaggt catctatcgg ctgaaggacc
      961 tcttcgcctt ggagcgccat gggtccaaga cgctcggcgg cctgctcgcc cgcctggcgg
     1021 cgaaagttgc ggcctacctg tgcgggcagc gtctcaactc tttgctcagt cggtc
//
LOCUS       DASQSL010000789         1182 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_59668, whole genome shotgun sequence.
ACCESSION   DASQSL010000789 DASQSL010000000
VERSION     DASQSL010000789.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1182
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59668"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..483)
                     /locus_tag="VE844_08085"
     CDS             complement(<1..483)
                     /locus_tag="VE844_08085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013033518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZC01308.1"
                     /translation="MSVDPIIHAEDLVKRVPSPEGDLTILDHINLSIARSEALAIVGA
                     SGSGKSTLLGLLAGLDTPTAGRVILDGVDLNTLDEDGRALLRGARVGFVFQFFYLLPN
                     LTALENVMLPLELADHAQPREAALSELEAVGLGHRSGHYPNQLSGGEQQRVAIARAFA
                     A"
     gene            494..1096
                     /locus_tag="VE844_08090"
     CDS             494..1096
                     /locus_tag="VE844_08090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018954525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HZC01309.1"
                     /translation="MQTVLLLVVLFGSMINAVTQPVIVVLGDSLSAGYGIEFNQGWVA
                     QLQQRLRREGYPHRVVNASISGETTRGALARLDDLLARHRPAIVIVELGGNDGLRGLS
                     LQEMRENFSQIILRSKQAGARVLLITMRLPTNYGPVYIGGFQKLFDALVHEHAVPTAP
                     FILEGIADRVELMQEDGIHPRIEAQGLMLDNVWAALAQLL"
BASE COUNT          275 a          307 c          347 g          253 t
ORIGIN      
        1 tgcggcaaag gcgcgggcga tcgccacccg ttgttgttca ccgccagaga gttgattggg
       61 ataatggccg ctccggtgcc ccaagcccac cgcctcgagt tctgagagag ccgcttctcg
      121 gggttgggca tgatccgcaa gctctaaggg cagcatcaca ttctctaagg cagtgagatt
      181 gggcaacaga tagaagaatt gaaacacaaa gcctacccgc gccccgcgaa gaagcgcacg
      241 gccgtcctca tcgagggtgt tgagatccac accatcgagg atcacccgcc ccgcggtggg
      301 tgtatccaaa cccgcgagca agccgagcag agtggattta cctgagcctg aggcgcccac
      361 gatcgccagg gcttcggatc gggcgataga aaggttaata tgatccagaa tcgtaaggtc
      421 cccttcaggg gaaggtaccc gtttgacaag atcttcagcg tgtatgatgg gatcaacact
      481 cataatgcga ataatgcaga cggttctgct gcttgtagtg ttatttggat caatgataaa
      541 tgcggtaacc cagccggtca tcgtggtctt gggcgatagt ttgagcgccg gttatggtat
      601 cgagttcaac cagggttggg ttgcgcaact ccaacagcgg cttaggcgag aaggctaccc
      661 gcaccgggtg gtcaatgcca gcatcagcgg tgagaccact cggggggcgc tggcgcgctt
      721 agacgatctc ctggcccgac atcgtcccgc catcgttata gtggaactcg ggggtaatga
      781 tggattacgg ggattgtcgc tccaagagat gcgtgagaat ttttcccaga tcatcttacg
      841 ttccaagcaa gcgggcgcta gggtactgtt gatcacgatg cggttaccga cgaattatgg
      901 acctgtttac atcggaggtt tccagaaatt gttcgatgca cttgtgcacg agcatgcagt
      961 tccgaccgcg ccctttattc ttgaggggat cgccgatcgc gtggagctca tgcaagaaga
     1021 tggcatccac ccgcgtattg aagcccaggg cttaatgctc gacaatgtat gggcagcctt
     1081 ggcgcagtta ttgtaagcaa catctactag gaggttaata actccagcac acatcatggg
     1141 cagggatgcc catacagcta ctcggcggat ccaaggcaca ac
//
LOCUS       DASQSL010000790         1275 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_20371, whole genome shotgun sequence.
ACCESSION   DASQSL010000790 DASQSL010000000
VERSION     DASQSL010000790.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20371"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..159)
                     /locus_tag="VE844_08095"
     CDS             complement(<1..159)
                     /locus_tag="VE844_08095"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HZC01310.1"
                     /translation="MGVLDDGAMGIIRTLCHLQTGIRLSELVNLRVDDVDFEHRLLTV
                     RQGKGKKDW"
     gene            complement(214..510)
                     /locus_tag="VE844_08100"
     CDS             complement(214..510)
                     /locus_tag="VE844_08100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014098633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HZC01311.1"
                     /translation="MTKAELVTQVALKTELTKQQTAEVVDLLLECIIKALQAGDKVEL
                     RGFGSFRRRDRGPRLGRNPKTGEVVAVCAQTVPFFKTGKMLQARLNPELAPSSS"
     gene            1053..>1275
                     /locus_tag="VE844_08105"
     CDS             1053..>1275
                     /locus_tag="VE844_08105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012373736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SWIB/MDM2 domain-containing protein"
                     /protein_id="HZC01312.1"
                     /translation="MAESKGLKQPVKLQSELATMLGAKELPRTEITQKLWDYIKANQL
                     QTKTPNGKPENAGKFIVADQTLLPIFKKTK"
BASE COUNT          300 a          376 c          343 g          256 t
ORIGIN      
        1 ccagtccttt ttacccttgc cctgccggac ggtgaggagc cggtgctcaa aatcgacgtc
       61 atcaacgcgt aagttgacca gctcacttaa gcggataccg gtttgcaggt gacacaatgt
      121 ccggattatt cccattgcac catcatccaa gacacccatc tgtcgtcgcc gatgacgacc
      181 ccgcccggtg acggattgcg cctcacgctc acgtcaagat gaagacggcg ccaactccgg
      241 attcaaccga gcctgaagca tcttgccggt cttaaaaaag ggaacggttt gggcgcagac
      301 cgcgacgacc tcacccgttt tgggattgcg gcccagacgc ggaccacggt cgcggcggcg
      361 aaagctgcca aatcctcgca gctcgacttt gtcacccgcc tggagggcct tgatgataca
      421 ctcaaggagc aagtcgacca cctcggcggt ctgctgtttc gtcagctcgg tcttcagagc
      481 cacctgcgtc accagttcgg ctttggtcat gagttccgct ctcccgtcgg atggggccag
      541 acatcgattc attggggcca gactgccacc aggggctcgg atcgcaccca gcaaaacccg
      601 gacggcttcg aacccagctt acgggaccct ctcaagagtg cccccccgat agagagcccg
      661 cgaagttcta tcatatcaaa cgcctgagtc ggatgctaag ggtaacgaac tcgctgggat
      721 gacaggatgc gtgaggaccc tagtcgtcag acggtccatt ggagctcatg catccagctg
      781 agacgcagac ctcgagcgat aagcgatgtc cctcatccct ctacggactc tgaaacacat
      841 cagcgtccag gtgtctccct ttatgaagcg acggcggcct gagcgatttg ggaaggtgac
      901 cgcatctcat ttggggactg gcctctcatg tcgtatcttt ctcaattctt ctgccgacat
      961 caaacaaaat cgagtatact gaccacacat agcccaggca tgaactgggg tggacctgga
     1021 gagcgtaacg acttgctgat aaggggttct acatggcgga gtcgaagggt ctgaagcaac
     1081 cggtgaagct gcaatcggag ttagccacaa tgctgggtgc caaggagctt cctcgaaccg
     1141 agattaccca gaaactgtgg gactatatca aggcgaacca gctgcaaacc aagacgccca
     1201 acggcaagcc cgagaatgct ggcaagttca ttgtcgcgga tcagaccttg ttgccgattt
     1261 tcaaaaaaac caaat
//
LOCUS       DASQSL010000791         2709 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_86607, whole genome shotgun sequence.
ACCESSION   DASQSL010000791 DASQSL010000000
VERSION     DASQSL010000791.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2709)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2709)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2709
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86607"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..359)
                     /locus_tag="VE844_08110"
     CDS             complement(<1..359)
                     /locus_tag="VE844_08110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009633386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4112 domain-containing protein"
                     /protein_id="HZC01313.1"
                     /translation="MDQTVERNSVAVPEDDRLRHLDNLSEILDSAFAIPGTRFRIGLD
                     GILGLIPGIGDATGAALSIYLIFEAVRLGLPLGTLLRMVGNVAIETAVGAIPIVGDIF
                     DIGWKANMRNMALVRAH"
     gene            complement(429..1076)
                     /locus_tag="VE844_08115"
     CDS             complement(429..1076)
                     /locus_tag="VE844_08115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014258792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2959 domain-containing protein"
                     /protein_id="HZC01314.1"
                     /translation="MHTLRYAVVITLLSACSSPYYNVMERLGFPKRDILVDRVEAARD
                     SQEQAAEQFKDALEKFIAVTGFKGGALQEKYDQLQTEYEQSEARATEVHQRVEGVEDV
                     AEALFDEWEAELKQYTSAPLRRNSERQLQQTRAQYAQLIRAMKRAEAKMEPVLAAFHD
                     QVLFLKHNLNARAIASLKGNLASIESDIAVLIREMEASIREANRFINAMNVEQVS"
     gene            complement(1117..1443)
                     /locus_tag="VE844_08120"
     CDS             complement(1117..1443)
                     /locus_tag="VE844_08120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01315.1"
                     /translation="MIKPKMKRKKLSTLNRYARTGLALFDLAKTGGELAAASAQTIQH
                     RTQRMVRAGLSPSARDRKEFLLMGREKLEATAESTACMATEVVAFNQHLARMALRQMQ
                     AQTGAW"
     gene            complement(1478..2164)
                     /locus_tag="VE844_08125"
     CDS             complement(1478..2164)
                     /locus_tag="VE844_08125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01316.1"
                     /translation="MNELVTRSQPEQLKPLQEISKTSATGQRSAVPSLQIAPTTVGKG
                     NRIWNHLSIMWNRFRKRRLESAREVAKAEREFLEESEALQRTRARYQDLGIGIEAEKQ
                     LRHDQYLAAKLDRELALEEKRLKLGQLRRARTGLEENASESGDKQYQEQLQAAMRRAD
                     FETALRIIQAKKVFKLGTELARERDRLIEEIINGDAESLTAEQELQVNNIKSFFQRMI
                     DEIESGTRVP"
     gene            2380..2469
                     /locus_tag="VE844_08130"
                     /pseudo
     CDS             2380..2469
                     /locus_tag="VE844_08130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011434230.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein Dps"
     gene            complement(2485..>2709)
                     /locus_tag="VE844_08135"
     CDS             complement(2485..>2709)
                     /locus_tag="VE844_08135"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012874788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S16 family serine protease"
                     /protein_id="HZC01317.1"
                     /translation="RGKVLPVGGIKEKVLAAHRTGIRSVILPSRNERDVEEVPEELRR
                     QLRFIFVDDAEEVLRHALTPAPADLHQGAR"
BASE COUNT          486 a          849 c          725 g          649 t
ORIGIN      
        1 ctgtgggcac ggaccaacgc catgtttctc atgttggctt tccagccgat gtcgaagata
       61 tcaccgacaa tgggtatggc accgacggcg gtctcgatgg cgacgttgcc gaccatgcgc
      121 aggagcgtgc ccaagggcag ccccaagcgg acggcctcga agatgagata gatggagagc
      181 gcggccccgg tcgcatcgcc gatgccaggg atcaaaccga ggatcccatc gaggccgatc
      241 cgaaagcggg tcccggggat cgcaaacgcg ctgtctaaga tctcactcaa attatcgaga
      301 tggcgcaggc ggtcgtcctc cggcaccgcg acggaattcc tttcaaccgt ttgatccatg
      361 gggttcctcc tttcacgggt ctcgaaaagt tatctgagtc agcaggcgcc gtctaaccta
      421 cgcgacgttc atgagacctg ctccacgttc atcgcattga tgaagcgatt cgcctctcga
      481 atcgacgcct ccatctcccg gataagcacc gcgatgtccg actcgatcga agccaggttg
      541 cccttgagtg aggcgatcgc tcgggcgttg aggttgtgct tgagaaatag cacctggtcg
      601 tgaaaggcgg ccaagacggg ttccatcttg gcttcagcgc gcttcatcgc ccggatgagc
      661 tgagcatatt gtgcgcgggt ctgctgcagt tgccgctcgc tgttacggcg caagggcgcg
      721 ctcgtatatt gcttgagctc ggcctcccac tcatcgaata gcgcctcggc cacatcttcg
      781 actccctcga cgcgctggtg tacctcggtg gctcgcgcct cactttgctc gtactcggtc
      841 tggagttgat cgtacttctc ttggagtgcg ccgcctttaa acccggtgac cgcgataaat
      901 ttttccaagg cgtccttgaa ttgttctgcc gcctgctcct ggctatctcg cgccgcctcg
      961 acccggtcga cgaggatatc gcgcttggga aagccaagac gttccatcac gttgtaatag
     1021 ggtgaagagc aggcagagag cagggtgata actacggcgt accgcaacgt atgcaccgct
     1081 cgacctggtt ttggtaaccc tatcaacgcc gtttccttac caggcccccg tctgcgcctg
     1141 catctgccta agcgccatcc gcgcaagatg ctggttgaac gccaccacct cggtggccat
     1201 gcacgcggtc gactctgccg tcgcctcaag cttctctcgg cccatcaata agaactcctt
     1261 ccgatcgcgt gcgcttgggc tgagcccagc ccggaccatc cgctgggtgc gatgctggat
     1321 cgtctgtgcc gaggcggccg ccaactcacc gcccgtcttc gctagatcga agagcgcaag
     1381 cccagtgcgg gcgtatcggt tgagtgtgga cagctttttt ctcttcattt tcggcttgat
     1441 catggtctca tcaccgctgt ctatttagca ttaattctta cggcacccgg gtcccagact
     1501 cgatttcgtc tatcatcctc tggaaaaagc tcttgatatt atttacctgt agctcttgtt
     1561 ccgcggtcag gctttccgca tccccgttga taatctcttc gatcaaacgg tctcgttctc
     1621 gagcaagctc ggtgcccagc ttgaacactt tcttcgcttg aatgatccgc agcgcagttt
     1681 cgaagtccgc tcgcctcatg gctgcctgca gctgttcctg gtactgctta tctccagact
     1741 ccgaagcatt ttcctcaagc cctgtgcgag cgcgccgcaa ttgtcctagc ttgagccttt
     1801 tctcctccag cgccagctcg cgatctagtt tggccgccag gtattggtcg tgtctcagct
     1861 gtttctcagc ctctatgcca atccccaggt cttgataacg tgccctggtt cgttgcagcg
     1921 cttcgctctc ctccaagaat tcccgctccg ccttcgccac ctctctagcg ctctcgagcc
     1981 gccgctttct gaatctgttc cacatgatgc taaggtgatt ccagatccgg ttgcccttgc
     2041 ccacagtagt tggcgcgatc tgcaagctag gcactgccga gcgctgcccg gttgccgagg
     2101 ttttgctaat ctcttgcaac ggtttcagct gttctggttg cgaccgtgtg actagctcat
     2161 tcataaccgt atgtcccaca ctatcggtga aggtttatgg ccttcggtct aggatagttt
     2221 cgcttgtgca ttcgatctag cgctcgacca gagcgctcgc tcatccagca ggatgtcatc
     2281 gccgcgccca cttggtcgat aacgctagac gtttagagtg acaaattctt cagaagttgt
     2341 accaaatcct gctgctagtg gcgttttgtc agacactcac tcggcgacaa ggatagcgcc
     2401 gatatcttca ccgagatctc gcgaagggtg gacaagtatc tctggttcgt cgaggcacac
     2461 ctcaggtagc ccagctcgcg cacctcacct cgccccctgg tgcaggtcgg ctggagcagg
     2521 cgtgagcgca tgtcgcagga cctcttcagc atcgtcgacg aagatgaagc gcagctgccg
     2581 gcgaagctcc tccggcacct cctcgacgtc ccgctcgttc cggcttggca ggatcacaga
     2641 gcggatgccc gtccgatgcg ccgccaggac cttctccttg atccctccga cgggaagcac
     2701 cttgccgcg
//
LOCUS       DASQSL010000792         1298 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_101320, whole genome shotgun sequence.
ACCESSION   DASQSL010000792 DASQSL010000000
VERSION     DASQSL010000792.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1298
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101320"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..333
                     /locus_tag="VE844_08140"
     CDS             <1..333
                     /locus_tag="VE844_08140"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HZC01318.1"
                     /translation="AVEVVATNAVHGGIVLGGQITPLDGLNLRYEGMVAEVDGEPIGS
                     GAGVEVLGNPAASVAWLANKLSEFDLTLRPDDIVLSGSIIRMLEVKAGQAVKATFSRI
                     GSVGARFV"
     gene            complement(485..883)
                     /locus_tag="VE844_08145"
     CDS             complement(485..883)
                     /locus_tag="VE844_08145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013558898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PPOX class F420-dependent oxidoreductase"
                     /protein_id="HZC01319.1"
                     /translation="MPSTIAQQYLDLFQKKAFAHLATLMPDGRPQVTPVWCDFDGTYV
                     RINSAKGRVKDRNMRRDPRVTLTIQDPENPYRYLEVRGRVIEITENGADAHIDGLAKK
                     YLGVEKYPYRKPGETRVIYKIQPDQTSAMG"
BASE COUNT          226 a          399 c          380 g          293 t
ORIGIN      
        1 gccgtcgagg tcgttgcgac caacgccgtg cacggcggca tcgttctcgg ggggcagatc
       61 accccgctgg acgggcttaa tctgcgctat gaggggatgg tggctgaggt cgatggcgaa
      121 ccgatcggtt cgggcgcagg ggttgaagtg ttgggaaacc ctgccgcttc tgtggcctgg
      181 ctggcgaata agctctcgga attcgacctc accctacgcc cggacgatat cgtactcagt
      241 ggctccatca ttcgtatgct cgaagtcaaa gccggccaag ccgtgaaggc caccttcagc
      301 cgcatcggat ccgtcggtgc ccgtttcgtg taagtgcgca acttctacaa gcctaccaaa
      361 cctccccggt gcggtctctt ccaggcgggt cgccgcgcgt cccttcctct ccctgccagg
      421 aataggttgg gggaagggag ctggtagcat gccggcccct ctcgcagtcc attacccggc
      481 tgtttcatcc catcgctgat gtctggtcgg gctgaatttt gtagatgacc ctcgtctccc
      541 caggcttgcg gtagggatac ttctccaccc ccaggtactt cttggccaag ccatcgatgt
      601 gcgcgtcagc tccgttctct gtgatctcga tcacccggcc acggacttcg aggtatcgat
      661 agggattctc cgggtcctga atcgttaggg tgacccgagg gtcgcgccgc atattacgat
      721 ccttcacccg gccctttgcc gagttgatcc ggacataggt cccatcgaag tcacaccaca
      781 cgggagtgac ctgtggccgt ccgtcgggca tgagcgtggc taggtgagcg aaggcttttt
      841 tctgaaataa gtcgagatat tgttgagcga tcgtggacgg catggctgtc ctccttgact
      901 gaagataccg actgctgctt acgactgact tgcgccctaa cccgattcag cggctgctca
      961 cgacctaacc ggtgggtgta agaaggaaaa cctactctct ctcgagcggc tgcctaccat
     1021 tatgcgtgac ctctcctgtc ttgtccaatg gtcaccttac gttggcaacg cccccgacaa
     1081 tgttcctgtc caccagatgc gtagggcaag acttgcgtgt ttcgccgccc ctgacggtaa
     1141 cgatactgca cgctgttaga acgatgcctt ggcgtggcgt acactgtggc cgagacgagc
     1201 gaccggcggg tctgcaccgt cgccaccgcc agtcgctgcc ccaccgcttg gcagcggcgg
     1261 cgaggtgttg tagaccctgt accgcctcga ttcattgg
//
LOCUS       DASQSL010000793         1831 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_195158, whole genome shotgun sequence.
ACCESSION   DASQSL010000793 DASQSL010000000
VERSION     DASQSL010000793.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1831
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195158"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            295..1788
                     /locus_tag="VE844_08150"
     CDS             295..1788
                     /locus_tag="VE844_08150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01320.1"
                     /translation="MPKKFHVETCVPSREMQTPEVCLPKAWRDTEAVDYLRARKPVGG
                     FLFVTVTQLTMVWWAYRRQHIQLKDLRVWFGALELVARRCGLKNDREACYGTKELRTL
                     VAGRGGEEASIKRLEAVGLLSWSETDISFATEVSEMRVSDVSSLHEMLSRIQNHRRKV
                     PVPRQVVRLIASPSKRCVIATLLGHLMPCLYYRSGECVSGGFCRASWVAEVFTIDLRN
                     VKASRKFLAETLGLLERVPLPQSLCNRYGQKVIINLSWHGTAVDKSDHERSKLPPLEA
                     QTDTGLPPLEEHTKPLREHKHQKPAAGGTSTGVLEPSKTEQPALRHIVPDDLTDTGRL
                     LILFDEAQARGLIGGSESERLTFVATAERARLRAITNAPGLFAELVRRRLWHFVTQDD
                     EDRAHQRLREHCYGRREAGRPPALRRPAGALSQDALFVADISTRLSRQGFTGEVFAAV
                     SQALPEWTRERWEKAVHELSAARTRAKDHGALRRIGNFSVLETVKVR"
BASE COUNT          416 a          510 c          537 g          368 t
ORIGIN      
        1 aaattgttgc aagtaggcgc tggcgcagta gaattcgagt agaaatttaa gcgggtatga
       61 attgccctca ggcacgaaat gaggaagttt ttagagaagg aagtttctat gtaagagagg
      121 gcataaaaaa gccgcaaaaa aagcgacttt tggcgaagtc gctctttttg cggctctcga
      181 ttgggtccca atcgaggcac aatgaataga ctggtgtaga gcccagtaac tattcactgt
      241 agcctccatt tccccgtccg tcaaggtcct aattaagagc tccacgggat tcttttgcct
      301 aaaaagtttc acgtggaaac ctgcgtgccc tcgcgggaga tgcagacacc cgaggtctgt
      361 ctgccaaaag cctggaggga tacggaggcc gtggactatc ttcgagcaag aaaacctgtc
      421 gggggattcc tgtttgtgac cgtaacccag ctcaccatgg tctggtgggc ctaccggagg
      481 caacacattc agctcaaaga cctccgcgtc tggtttggag ccctggagct cgtcgccagg
      541 cgctgtgggc tgaaaaacga cagagaagcg tgttacggaa ccaaggaatt acgaacgctc
      601 gtcgcaggca ggggagggga ggaagcctcc atcaagcgcc ttgaggccgt cggtctcctc
      661 tcctggtcag agacggacat cagctttgcg acagaggtct ctgagatgcg cgtgagcgac
      721 gtctcgagcc tccatgaaat gctctcccgg attcagaacc accggagaaa agtgccggtt
      781 ccgcgtcagg tcgtccgcct catcgcgtcg ccttctaagc gctgtgtcat cgctaccctt
      841 cttgggcacc tgatgccctg tttgtattat cgttccgggg aatgtgtcag cggcgggttt
      901 tgtagggcgt cgtgggtcgc agaggtgttt actatcgacc tccgcaatgt gaaggcgtcg
      961 cggaagtttc ttgccgagac gcttggcctc cttgagcgtg ttccactccc gcaatccctg
     1021 tgcaatcgtt acggccagaa agtcatcatc aacctctcgt ggcacggcac ggctgtggat
     1081 aagtcagatc acgagaggag caaattacca ccccttgagg cccaaactga caccggtttg
     1141 ccacccctag aagaacacac aaaacccctt cgggaacata aacaccagaa acccgccgcg
     1201 ggcggaacat ccactggggt tttagaacca tcaaagacag aacaacccgc cctcaggcac
     1261 atcgtgccgg atgacctcac agacacaggg cgcctgctga tactctttga tgaggcccag
     1321 gcgcggggcc tcattggggg cagtgagagc gaacggctga cgttcgtcgc cacggctgag
     1381 cgcgctcggc tccgggcgat aacgaacgcg cctgggctct ttgccgagct cgtccgccgg
     1441 cgcctctggc acttcgtgac acaggacgat gaagaccggg cacaccaacg cctgagggag
     1501 cattgctacg gaagacggga ggcagggaga cctccagcgc tgcgccgtcc tgcaggagcc
     1561 ctgtcacagg atgcgctctt tgtggccgat atctcgacac gcctcagccg acaaggtttt
     1621 acaggcgagg tgtttgccgc ggtcagccaa gcgcttcccg agtggacacg ggaacgctgg
     1681 gagaaagctg ttcatgagct ttcagccgcc aggacgcgcg caaaggacca cggggcgctt
     1741 cgtcgcatcg gcaatttctc agtgctcgaa accgtcaagg tgcgctaaac ggctctgttg
     1801 caaaaactct cggtgatctg gtagaagaca g
//
LOCUS       DASQSL010000794         1658 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_20405, whole genome shotgun sequence.
ACCESSION   DASQSL010000794 DASQSL010000000
VERSION     DASQSL010000794.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1658
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20405"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            763..1053
                     /locus_tag="VE844_08155"
     CDS             763..1053
                     /locus_tag="VE844_08155"
                     /inference="COORDINATES: protein motif:HMM:NF014376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HZC01321.1"
                     /translation="MTTTRVRWIVGIMVVGLSLAGGFALAADNQAISGQTVMTGDYHH
                     CEIYIVSGQGTATINGQKVPFKPGTVLYIPNGMPYSIKADEGNLTYKMTGVK"
     gene            1479..>1658
                     /locus_tag="VE844_08160"
     CDS             1479..>1658
                     /locus_tag="VE844_08160"
                     /inference="COORDINATES: protein motif:HMM:NF013003.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HZC01322.1"
                     /translation="MGLDLEGANLSGAKLDEANLGEAFLGKADLNGVDLGGVRGTHQA
                     HAIETVRFTPPDHSNA"
BASE COUNT          384 a          449 c          519 g          306 t
ORIGIN      
        1 gagggtggca cagccacggc aggctgagtc gcatggctga gcacgtttga cgtcttttgc
       61 cgcctcgctt ggggtacacc gcggcgcagc ccagtgtacc ccgagcgagg cggctacagc
      121 ttcctcattg gtatcactgg atggctcagc agctccggag cgtgcgtgca gaaggaggac
      181 gtgaccagaa acagccacac gacccagggg ggtatgtcgt gaagatgaaa actggcctta
      241 aggtgggcgc caccttcatc actttcatca tacaaacctc accagcacag ctaatgcgcc
      301 ggtggggtat gtcatcgatc tacccggggg attaggtcct cctcatggtg gtgaaaggag
      361 tcccatgtcc ggtgaggacg ccatgagcgc tcacggatac gctatgggct atgatcaccc
      421 cggggcgggg ccgaaaccga tcccgcattg gcctgtcttc gaaggcatcc tttggatctt
      481 atggacgggt ccccgctgac aaaatctgac gaccacgtta cctcggccaa aagaggcgcg
      541 aaggtcggca agaccaagag ggagaaaggc acgaagtgga tggtagttga tggccaaagt
      601 aggcctgtgg gaaacttctt ggcgccggtg tcctcagtcg aggtggcctt ggaggcggga
      661 gacagacgcg gcaaacggtg ttttgctact aggaagcggt aatactcagc ttttgttgag
      721 tcttctctca gtgcatacct tcggcaggaa aggagggttg gcatgacaac cacacgtgtg
      781 cggtggatag tagggataat ggtggtaggg ctaagcctgg cgggcgggtt cgcgctggcg
      841 gctgataacc aggccatcag tggtcagacg gtcatgacag gggactacca ccattgcgag
      901 atatatatcg tcagcggtca gggtacggcg accatcaacg gccaaaaggt tcccttcaag
      961 ccaggtacgg tcctctacat cccaaacggc atgccctaca gcatcaaggc ggatgagggc
     1021 aacctcacct acaagatgac aggggtcaag taaccccggt ccgggcgcgg cagccatcac
     1081 gccgaaggca gggccgttcg cctgtctctc gattctggga ccgcctccac atcgccgggt
     1141 cattcctcct catcaacgag gggcgctagc gttgtcaacc tatggattac aggcgctccg
     1201 gacagacagt ggaggtgtta atctatgacg aggccatgcg gatcgagcag gccgaggacc
     1261 tgctagtggc aaaccacgtc aagatgccct ttccactggt tgggagtgag gccgaacctt
     1321 atctagcagg tagtaacgtg gcaatatgag ccggtttgat atgccctaac tgcagctaca
     1381 cgcacagaaa ggggcacttc atggcaaagc tggaacacgt cgaactgatc aggcaaggga
     1441 cagaaagcat tctcaaatag cagcggcaaa atccagacct gggacttgac ttagaggggg
     1501 ccaacctgag cggggccaag ctggacgagg ctaacctagg ggaggccttc ctgggcaaag
     1561 ccgacctgaa cggggtcgac ctgggcggcg tgcgtgggac tcaccaggct catgccatag
     1621 aaaccgtccg gttcacgcca cccgatcact caaacgcg
//
LOCUS       DASQSL010000795         1097 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_86638, whole genome shotgun sequence.
ACCESSION   DASQSL010000795 DASQSL010000000
VERSION     DASQSL010000795.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86638"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..871)
                     /locus_tag="VE844_08165"
     CDS             complement(<1..871)
                     /locus_tag="VE844_08165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018288373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZC01323.1"
                     /translation="MAQKISVLGIDIAKLMFHVIGMDDAGHVVLRKRLARSELPRFIA
                     NLPPLRIGMEACGSAHYWARCFREHGHDVKLIAPHFVKAYVKSPKNDARDAEAICEAV
                     TRPTMRFVPIKRVEQQDLQALHRVRERLIKARTALVNEIRGLLHEYGIILPQGITKFR
                     TLVVKKLEAEQAQLTPCSRELFRQLYEEFLALDQRLASYDEQLTAMGQAHPEYQRLQT
                     IPGIGPISATALIAAIGEATQFKNGRQLAAWLGVVPREHSTGGKPRLLGISKRGDVYL
                     RKLLVHGARATLRW"
     gene            complement(973..1097)
                     /locus_tag="VE844_08170"
                     /pseudo
     CDS             complement(973..1097)
                     /locus_tag="VE844_08170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011033184.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
BASE COUNT          209 a          332 c          326 g          230 t
ORIGIN      
        1 cccatcggag agtcgctcgc gccccatgga ccaacaattt tcggagatag acgtcaccac
       61 gtttgctgat cccgagaagc cgtggcttgc cccccgtcga gtgttcccgc gggaccacac
      121 ccagccaggc ggccaactgg cggccgttct tgaactgggt cgcctcaccg atcgccgcga
      181 tgagcgcagt ggcactgatc ggtccaatcc cggggatggt ctgcaggcgc tggtattcgg
      241 ggtgtgcttg ccccatggcc gtcagctgct cgtcgtaaga tgcgagccgt tggtcgagcg
      301 ccaggaattc ctcatagagt tgccggaaca gctcgcggct gcatggggtg agctgggctt
      361 gttcagcctc aagcttcttc accacgaggg tgcgaaactt ggtgatgcct tgcggcaaga
      421 taatgccata ctcgtggagc agcccgcgga tctcattgac caaggcggtg cgggccttaa
      481 tcagccgctc ccggacgcga tgcaaggctt ggaggtcttg ctgctccacc cgtttgatcg
      541 gcacaaagcg catggtcggc cgtgtcacgg cttcacagat ggcttccgca tcgcgggcat
      601 cgttctttgg ggacttcaca taggctttaa cgaagtgtgg ggcaatcagc ttcacgtcat
      661 ggccatgctc gcgaaaacac cgagcccagt agtgggcact tccacacgct tccatcccga
      721 tacgaagtgg gggcaaattg gcgataaagc gtggcaactc gctgcgcgcg aggcgctttc
      781 ggagcaccac gtgcccggcg tcatccatac cgatgacgtg aaacatgagt tttgcgatat
      841 caatcccgag tacgctgatt ttctgtgcca tcgaactcgc ctcctctggg tgaatggttg
      901 cccacactgc gacaaccatt ctggctcatt gcacctgcgt gggaaagagg cgggtccatt
      961 tcattagaac cggccggcct gcttcagata ggttcttgcc cagccgacgc gattggcaaa
     1021 tacggcccgg cgcccactgg ggagaagctc attgcgttcc gcctgcgtga gagcacactc
     1081 atccgccagc gtttcaa
//
LOCUS       DASQSL010000796         1138 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_30972, whole genome shotgun sequence.
ACCESSION   DASQSL010000796 DASQSL010000000
VERSION     DASQSL010000796.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1138
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30972"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..821)
                     /locus_tag="VE844_08175"
     CDS             complement(<1..821)
                     /locus_tag="VE844_08175"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HZC01324.1"
                     /translation="MPLLSKLALPLSILLLAAFVYSLYGFNGVLLRDYSIYLYSGQRL
                     AEGVPPYVSVFDHKGPLSPMLAGLGVMLSKWLSWDDLYTVRLVFFAVGCLTVVAVYLL
                     GKNVFRSQAAGFFGALTFLGFYAYAQPAASGPEPKTPMVLFQALSLLLAIWKRWFWAG
                     FFGSLAFLVWQPMGVFALVTFVLAVTRPREERYGAALHALAGIMTPLVATVAYFYYQG
                     ALGDFVDGFILFNFLYLIRWDSQLVSVLAGAAGSVALPYGTMIVPIILGLIMIARL"
     gene            complement(869..>1138)
                     /locus_tag="VE844_08180"
     CDS             complement(869..>1138)
                     /locus_tag="VE844_08180"
                     /inference="COORDINATES: protein motif:HMM:NF012922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HZC01325.1"
                     /translation="VIRARVIGALETATSEGAEPNVFAVPADDPRFDDIEALEDMPEQ
                     NLREIEQFFEASMRLEGQEDAEVQEWYGLEEAHEIIRKYSSAEVT"
BASE COUNT          298 a          336 c          310 g          194 t
ORIGIN      
        1 aggcgtgcga tcatgatcag tccgaggatg ataggtacta tcatcgtgcc gtacggtaaa
       61 gccacgctgc ccgccgctcc agccaggact gatacgagtt gtgagtccca ccgtataagg
      121 tataggaagt taaagagaat aaacccgtct acaaagtcgc ctaaagcacc ttgatagtaa
      181 aaatacgcca cagtggctac tagcggcgtc attatccctg ccagagcgtg aagcgcggcc
      241 ccgtagcgtt cttcccgagg ccgcgtaacg gccaggacaa acgttacaag cgcaaagacc
      301 cccataggct gccatacaag aaaagccaga gaaccaaaaa aaccagccca aaaccacctc
      361 ttccagatgg ccagcaaaag acttaaagcc tgaaagagaa ccatcggcgt cttcggttca
      421 ggccccgagg cagcaggctg tgcgtaggcg tagaagccca ggaaggtcag agccccaaaa
      481 aaccccgccg cctgagaccg gaacacgttc ttgcccagca ggtaaaccgc aacaaccgta
      541 aggcagccaa cagcaaagaa aaccaggcgc acagtgtaga ggtcatccca gcttaaccat
      601 ttagataaca tcacccccag cccggcaagc atgggcgaca gaggcccctt atgatcgaag
      661 acgctgacgt aaggaggaac gccttcggcc aacctctgac cgctgtagag gtagatggag
      721 tagtcgcgaa gcagcacccc gttgaagccg tagaggctat agacgaaggc ggccaagagc
      781 aggatagaaa gcgggagagc tagcttgctc agaagcggca aagccagctt gctcgccgac
      841 gcaaggttgc ccttttgcgc gaggtgcgtc acgtaacttc agcagagcta tatttgcgaa
      901 ttatctcgtg ggcttcttcc agaccgtacc actcctgcac ttccgcatcc tcttggccct
      961 ctaggcgcat gctagcctcg aagaactgct cgatctcgcg caggttctgt tcgggcatgt
     1021 cctccagggc ctcaatgtcg tcgaagcgcg gatcgtcggc aggtaccgcg aagacattgg
     1081 gctcggcgcc ttcgctggtg gccgtctcca atgcgccgat gacgcgcgcc cggatgac
//
LOCUS       DASQSL010000797         1872 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_6556, whole genome shotgun sequence.
ACCESSION   DASQSL010000797 DASQSL010000000
VERSION     DASQSL010000797.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1872)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1872)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1872
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6556"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(381..1688)
                     /locus_tag="VE844_08185"
     CDS             complement(381..1688)
                     /locus_tag="VE844_08185"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01326.1"
                     /translation="MQSPLTDADTLFEELLQDLPPETVPLAREFKAFGRAKKVKTPEH
                     LLRLVLLYCGLDKSLREAAGTFTVLYESITDQSVAERLQAWGPWVNALLRQMLPMSAV
                     SARPEGLRFVVIDASSVQAPGAKGIDHRLHLAMDLVSLQFIEVLISDVHTGETLKHFP
                     LGPGDVALTDRGYAQAQGMSEAVKRGASLIVRLNPFSVVLFDAIGEPLRLSDALKRQR
                     TETIRTLEVVIESADGQDKVRGWVQAYRLNAEQAGRARQQCRKRHKTGTPKAETLDLA
                     GWVLVFTTLAPAVLSAQTIMALYRLRWQVELAIKRWKSVLDVDALRAKAGSPLAEVWL
                     HGKLLYAMLLERRMRRKLGDSWGRLDQTRRVTWWRVWGLLKDEIAPMVTGALFWKEEA
                     WTACLNVLAERPRRRTLQQLPPEAVAVLYHSDEPQPESQPIAA"
BASE COUNT          417 a          559 c          509 g          387 t
ORIGIN      
        1 tggtattaaa aggttcttct agtaatccaa aaatagtttg taatcaatag tgtcctccat
       61 acttcagcgt aactctctaa gtactagtat aagagttggc ttgaaaatgt caagagatag
      121 gcaaagttca caaaggatag atataaacag ttcgtcatca gtacacaatt tgctgcaaca
      181 acagtaattg ttgaaatcct tctgcttgtg gctttgctta agccaaaatc ctgcaagtaa
      241 aaataggctg cttcactgac aagcggtttt attgacatag aacatgccat cgagaacccg
      301 ccgaagatcg aggggtggcc atccgggtcc accgggcata agcgccagga taagcatgga
      361 ttctccctgg aaacacatcg tcaggccgct atcggttggc tttctggttg gggctcatcg
      421 ctgtgataaa gcacagcgac ggcctcgggc ggcagctgtt gcaaggtgcg tcggcgcggg
      481 cgttcggcca acacgttcaa gcaagctgtc catgcctcct ccttccagaa caaggcgccc
      541 gttaccatcg gggcgatttc gtctttgagc aggccccaga cccgccacca tgtgacccga
      601 cgtgtctgat cgagccgacc ccagctatcg ccgagtttgc gccgcatacg tcgctccagc
      661 agcatcgcat agagtaattt gccatgcagc cagacctcgg ccaaggggct gcccgccttg
      721 gcccgcaagg cgtcgacatc gagcacactt ttccagcgtt tgatcgcgag ttccacttgc
      781 cacctcaagc gatagagcgc catgatcgtc tgggccgaaa gcacggcggg cgccagcgtg
      841 gtaaacacca acacccagcc cgccagatcc agcgtctcgg ctttcggcgt gcccgtttta
      901 tggcgcttgc ggcactgttg ccgagcccga cccgcttgct ctgcgttcaa gcgataggcc
      961 tgtacccaac cccgcacctt gtcttggccg tccgccgact cgatcaccac ctccagggtg
     1021 cgaatcgtct cggttcgctg ccgcttcaag gcgtcactca accgtaaggg ctcaccgatg
     1081 gcatcaaaca acaccacact aaacgggttc agtcgcacga tgagcgacgc cccccgcttg
     1141 accgcctcac tcatgccttg agcctgcgca tagccccggt cggtcaaggc gacatcgccg
     1201 ggacccaggg ggaaatgctt cagcgtttcg ccagtatgga catcgctgat gagcacctca
     1261 ataaactgca acgacaccag gtccatcgcg aggtgcaggc gatggtcgat ccctttggcg
     1321 ccgggcgctt gcacactgct ggcatcgatg accacaaagc gcagcccctc gggccgtgcc
     1381 gacacggccg acatcggcag catctgcctg agcagggcgt tgacccacgg accccaggcc
     1441 tgtaagcgct cggccaccga ttggtctgtg atcgactcat acagcacggt gaaggtgcct
     1501 gctgcctcgc gtaaagactt atccaaacca caatataaca ggactagacg caaaaggtgt
     1561 tccggcgttt tgaccttttt ggcccgcccg aaggctttga attcgcgggc cagtggcacc
     1621 gtctcggggg gcaggtcttg caaaagttct tcaaagaggg tatcagcatc cgtgaggggc
     1681 gactgcatgg tcggggtctc ctatagggga tggactcatg gttaacccat gcagtatgcc
     1741 actccgtttc cgtacatgac agctaatcct ggcgctgatg gcaataaggg gatgggctca
     1801 ggacccagat atgcgaagat aagcccggcg agctcttgca ccgggtaagc cgcgattttc
     1861 acccggcagg ga
//
LOCUS       DASQSL010000798         1807 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_183593, whole genome shotgun sequence.
ACCESSION   DASQSL010000798 DASQSL010000000
VERSION     DASQSL010000798.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1807
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183593"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1271)
                     /locus_tag="VE844_08190"
     CDS             complement(<1..1271)
                     /locus_tag="VE844_08190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013956605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HZC01327.1"
                     /translation="MPVSPPVFAVALLSGAALGYEILLTRLFAIIQWHHFAYMMISAA
                     LLGYGAAGTVVTLMQRWLQARFTRVFSAVAILFGLGAVAGFLSAQRVPFNPLAFAWDP
                     REIVYLVMIYLLLFMPFFFAAIALCLSFSCYGRISHRLYSFDITGAACGSLAIIGVLF
                     ALSPSRALSLIGAMGFVVAGVAWLECRMKSYWPAVLFFTLGIAVPLALPLSWSALKLS
                     EYKELSQTLRITGTRILAQTSSPLGFITVVESPRIPFRYAPGLSLNAPLEPPAQLGIF
                     TDGEGFSALTRFDGQLEPLIYLDYLTSALPYHLLDRPEVLVLGAGAGSDVLQALYHRV
                     RSVDAVELNPQIVELVQERYRAFSGRPYSAPGVQLHVAEARGFVAASPKHYELIQVAL
                     VDAFGASSAGLYALSESYLYTIEAFREYLQHL"
     gene            complement(1285..>1807)
                     /locus_tag="VE844_08195"
     CDS             complement(1285..>1807)
                     /locus_tag="VE844_08195"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007992649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HZC01328.1"
                     /translation="PPEERDRAYKNRPLPIGYGQTISQPYIVALMTDLMRLEPADKVL
                     EIGTGSGYQAAILAELVREVYTLEIIEPLAKQAQERLPTLGYKHVEIRVGDGYYGWEE
                     HAPFDAILVTAAASHIPPPLVRQLKPGGRMVIPVGTHFLTQYLMLVNKAQDGSISMQQ
                     ILPVRFVPLTGGH"
BASE COUNT          416 a          524 c          560 g          307 t
ORIGIN      
        1 agatgttgaa gatattcccg gaatgcctcg atggtataga gatagctttc cgacagggcg
       61 taaagcccgg ccgaggatgc gccaaaggcg tccaccaggg ccacctggat aagctcatag
      121 tgctttgggc ttgccgctac gaagccgcgt gcctcggcca catgcaactg cacgcccggt
      181 gcactatacg ggcgcccgga aaaggctcgg tagcgctctt gtaccagttc cacgatctgc
      241 ggattaagct ccacggcatc gactgaacgg acccgatggt agagggcctg gaggacatcg
      301 ctgcccgccc ccgccccgag caccagcacc tctggccgat ccagcaggtg gtagggcaac
      361 gccgaggtaa gataatccag ataaatgagc ggctcaagct gtccatcaaa gcgcgtcagc
      421 gcactgaagc cttcgccgtc ggtaaagatc ccgagctgag caggaggttc tagaggggca
      481 ttgaggctca agcccggcgc atagcgaaac gggatgcggg ggctttcgac cacggtgata
      541 aacccgagcg gacttgaggt ttgagcgagg atacgggtgc cggtgatgcg cagcgtttgg
      601 ctcaactcct tatattcgga cagcttaagt gcgctccagg acaggggcag cgcgaggggc
      661 acggcgatcc ccagggtaaa aaacagcacc gccggccagt atgacttcat cctgcactca
      721 agccaggcta cccccgctac cacgaatccc atcgcgccga tcaggctcag tgctcgggag
      781 ggtgaaagcg cgaacaatac cccgataatg gcgaggctgc cacaggccgc cccggtgata
      841 tcaaagctat agagccggtg gctgatcctc ccatagcagg agaagctcag acagagcgcg
      901 atggcggcga agaagaaggg catgaacaac agcaggtaga tcatcactag ataaacgatc
      961 tcgcggggat cccaggcaaa ggccaaggga ttgaacggca cccgctgggc tgacagaaac
     1021 ccggccaccg caccaaggcc gaaaagtatc gcgacagctg aaaatacccg ggtgaatctc
     1081 gcctgtaacc agcgctgcat cagggtcact accgtgccgg cggcgccata gcccaagagc
     1141 gccgcgctga tcatcatgta ggcaaaatga tgccactgga tgatggcaaa cagccgggtg
     1201 agcaggatct cgtatcccag tgccgcccct gagaggagcg cgacggcaaa taccgggggt
     1261 gagacaggca gcgtggcacc gcttctaatg gccaccggtc aagggcacaa acctgacggg
     1321 gaggatctgc tgcattgaga tcgagccgtc ttgagcttta ttcactaaca tcaagtattg
     1381 ggtgagaaaa tgcgtgccca ccggaatgac catgcggccg cccggtttta gttggcgaac
     1441 cagcggcggt gggatatggc tcgcggcagc ggtgaccagg atggcatcaa acggggcatg
     1501 ctcttcccag ccataatagc cgtcgccgac gcggatctcc acatgcttat atcctagggt
     1561 cggaaggcgt tcctgggcct gcttggctaa gggctcgatg atctcgaggg tatatacctc
     1621 tcttacaagc tcggccagga tcgccgcttg gtaacccgag ccggtgccga tctccaggac
     1681 tttgtccgcc ggctctagcc gcatcagatc ggtcatcagg gcgacgatat agggctggga
     1741 gatcgtctgg ccataaccga tcggcagcgg ccggttcttg taagcccgat cccgctcctc
     1801 gggcggg
//
LOCUS       DASQSL010000799         1311 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_86676, whole genome shotgun sequence.
ACCESSION   DASQSL010000799 DASQSL010000000
VERSION     DASQSL010000799.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1311
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86676"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            167..>1311
                     /locus_tag="VE844_08200"
     CDS             167..>1311
                     /locus_tag="VE844_08200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01329.1"
                     /translation="MNRIVKATCASLLACALILDVATAAQTSPNFMIGTDMMMPDLYL
                     INTETDSRVKINLTKDPKWPGGLPLHTAILPDGHKAYLSVVSSDKDPLTILALRIGSI
                     DWNAKTADVSITNVMRLEEPGANPSMLVPTQTDTRQPITDRWKPTNHQLHGPTIHPSG
                     RFVYYTQWTDNKIRVIDVATDKLASIDPIQFGTRTRQLHGVFFNPAGDLAITTGFYFD
                     INDVILYKVDKNTGNLIPAKAIPLTVSEKNKEYAAFSHFIHWLDNRYAITSTQQVGPT
                     SLTPAGFKVIGPSVWLLDAETGEATLIIPPAKRPEEPGIYKPASDIMVIGNKLYVGEE
                     DSMDDEVNSDGYISVWDLSDRMKPRFIKRLQPGKELPKDFSMTHELYP"
BASE COUNT          317 a          391 c          334 g          269 t
ORIGIN      
        1 tgtataatgc cttatttttt caggagtcct aaaggatagt gtgcactagg taagtgtaga
       61 ggaaaatatt agcaaacagc gtttcttcta ttgcaattcg cgcggttcct gagccccgga
      121 caagctgccg atggaacagg atcccgcacc tggagggagg gaataaatga atagaatcgt
      181 caaagctact tgtgcatctc tactcgcttg cgccttgata ctcgacgttg cgaccgcggc
      241 gcaaacctcg ccgaatttca tgatcgggac cgatatgatg atgccggacc tgtacctgat
      301 caacaccgag acggacagcc gagtgaagat caatctgacc aaggacccga aatggcccgg
      361 tgggctaccc ttgcataccg ccatcctgcc cgatgggcac aaggcttatc tcagtgtcgt
      421 gagctcggac aaggatccgc taaccatcct cgccttacgc atcggctcga tcgattggaa
      481 tgccaagacg gctgatgtga gtatcactaa cgtgatgcgg ctggaggagc cgggggccaa
      541 tccttcaatg ctcgtcccca cccagaccga cacccggcaa cccatcactg atcgatggaa
      601 gccaaccaac catcaactgc atggcccgac tatccatccc agtggcaggt tcgtctacta
      661 cactcagtgg accgacaaca agatccgcgt catcgacgtg gccaccgaca agctcgcgtc
      721 gattgaccct atccaattcg gcacccgcac tcgtcagttg cacggcgttt tcttcaatcc
      781 cgcaggcgac ctcgccatta caaccggctt ttacttcgac atcaacgacg tgatcttata
      841 taaggtcgac aaaaataccg gcaacctcat ccctgccaag gccatcccac tgacggtgag
      901 cgagaagaac aaggaatacg cggccttcag ccacttcatc cactggctgg acaaccgcta
      961 tgcgattacc tccacccagc aggtcggccc tacctctctg actcctgccg gcttcaaggt
     1021 tatcggcccg agcgtgtggt tgcttgatgc cgaaactggg gaggccaccc tgatcatccc
     1081 tccggccaag cggcccgagg agccgggcat ctacaagccg gcctccgata tcatggtcat
     1141 tggcaataag ctgtatgtgg gcgaagagga tagcatggat gatgaggtca acagcgacgg
     1201 ctacatctcg gtgtgggact tgagcgaccg catgaagcca cggttcatca agcgtctcca
     1261 gccgggtaag gaactgccca aggatttcag tatgacccac gagctttatc c
//
LOCUS       DASQSL010000800         3695 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_6584, whole genome shotgun sequence.
ACCESSION   DASQSL010000800 DASQSL010000000
VERSION     DASQSL010000800.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3695
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6584"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1330
                     /locus_tag="VE844_08205"
     CDS             <1..1330
                     /locus_tag="VE844_08205"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010961385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HZC01330.1"
                     /translation="LPLKHSLAPAIRLARQGFPVSEHYRQMAELRHQALNTSPAAAAV
                     FLAHGSPPPLGYTIRQPDLAHTLEILAAQGAHAFYEGMLARRLIEGVRASGGIWTLED
                     LRRYRIVERPPVSGDYHGIRIVSAAPPSSGGVVLIEALNILAGYRLPTLDGITRKHLL
                     IEAMRRAYRDRAEYLGDPDFVNLPLARLLDKSYARVLGASISLAKATPSAALSVIRDR
                     AREAANTSHFSILDAAGNRVAATLSINYPFGSGFMVPGTGIVLNDEMDDFAINPALPN
                     VYGLVGGQANALAPGKRPLSSMTPTFLETPDRVAILGTPGGGRIISMVLLAVLDFAAG
                     RAPLSWVSLPRFHHQYLPDQVEYEPGALNEMEQAGLRRRGHRLQALTQSYGNMQAILW
                     DKTRDIVEAASDPRGEGSANLLLPVQRSCRHTTSTPCRAYGSSPSRHGSR"
     gene            complement(1278..2183)
                     /gene="rimK"
                     /locus_tag="VE844_08210"
     CDS             complement(1278..2183)
                     /gene="rimK"
                     /locus_tag="VE844_08210"
                     /EC_number="6.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013713573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6--L-glutamate ligase"
                     /protein_id="HZC01331.1"
                     /translation="MKIALLSRNPKLYSTRRLVEAAQKRGHPIRVLDALRCYMNITSH
                     KPSIHYKGEDLVGFDAVIPRIGASVTFYGTAVVRQFEMMGVYPLNESVAINRSRDKLR
                     ALQLLSRKGIGLPVTGFAHKPDDIEDLIKMVGGPPLVIKLLEGTQGIGVVLAETQNAT
                     ESVIQSFLELKASVLVQEFIKEAQGADIRCFVIGDKVVAAIKRQSKSGEFRSNIHRGG
                     KISLIKITPEERSTAIRAARTMGLNVAGVDILRSNHGPLVVEVNSSPGLESLEKVTGK
                     DIAGMIIEFTETHAETGKTRTRGKG"
     gene            complement(2208..2663)
                     /locus_tag="VE844_08215"
     CDS             complement(2208..2663)
                     /locus_tag="VE844_08215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013032128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RimK/LysX family protein"
                     /protein_id="HZC01332.1"
                     /translation="MRIGWREWVALPEFNIPAIKAKIDTGARTSVLHTFRLEEFTDNG
                     QAKVRFWIHPSRRDIAREILCVAQVVDRRVVCDSGGHREDRFVIHTPIRLHGREWSIE
                     ITLTNREDMLFRMLLGRSAIVAGGMIVDPSASYLAGAHRKGYRRHRSMS"
     gene            complement(2707..3066)
                     /locus_tag="VE844_08220"
     CDS             complement(2707..3066)
                     /locus_tag="VE844_08220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011238066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2782 domain-containing protein"
                     /protein_id="HZC01333.1"
                     /translation="MRGINKPTQIALGMSVAGLLCAAEPGVPQGLESLPDMPEPSARV
                     QSGEALEPPDVRIVPKKDVTIEEYRIRGRLYMIKVIPVKGTPYYLLDQDGDGRMETKM
                     SEIYSDFVVPSWVLFSW"
     gene            complement(3103..>3695)
                     /locus_tag="VE844_08225"
     CDS             complement(3103..>3695)
                     /locus_tag="VE844_08225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018950930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HZC01334.1"
                     /translation="PSVSIFGSARFGPDHPYYQLAEEIGRALSDSGFSVVTGGGPGIM
                     EAANKGAYAGLSPSIGLNILLPHEQQTNTYQNISLNFRHFFTRKVMFVKYASAYVVLP
                     GGFGTLDELAEILTLVQTGKTRKIPIILVGYEFWQGLLDWFNRTLVGEGTIDAAHMQL
                     FEVVDKPWEVVDAIFKYYEHRGLSPSPEEQEMLLPL"
BASE COUNT          779 a         1134 c          996 g          786 t
ORIGIN      
        1 gctcccgctc aaacactccc tggccccggc catacgcctg gcccggcaag gatttccggt
       61 ctctgagcac taccgccaga tggcggaact ccgccaccag gccctgaata cctcgccagc
      121 agccgccgcg gtgttcttgg ctcacggtag cccgccaccg cttgggtaca cgatccggca
      181 accggatctt gcccataccc ttgagatcct cgctgctcaa ggcgcgcacg cgttttatga
      241 agggatgctg gcccgtaggc tcatcgaggg ggtgcgcgcg agcggtggga tctggaccct
      301 ggaagactta agacgctatc gcattgtcga acgcccacct gtcagcggcg actaccatgg
      361 gatccggatc gtatccgcgg cgccgccttc ctcgggcggc gtggtgctga tcgaggcttt
      421 aaacatcctg gcgggctatc gtctaccgac actcgatggc atcacccgta agcacctgct
      481 tatcgaggcc atgcgccgcg cttaccgcga ccgggcggag tatcttggcg atcccgattt
      541 cgtcaacctg ccccttgcgc gtctcctgga caaatcctac gcacgggtgc tcggggcttc
      601 gatctcattg gctaaagcca cacctagcgc agctttgtcc gttatcaggg atcgcgctcg
      661 tgaggcagcg aacacctcgc atttctcgat cctcgatgcc gcgggtaacc gggtggccgc
      721 gacgctaagc atcaactatc cctttggctc gggattcatg gtgccgggca ccgggatcgt
      781 gcttaacgac gagatggatg attttgcgat aaatcctgcg ctaccgaatg tctatggcct
      841 cgtgggcggc caggccaacg cccttgcacc cggcaaacgc ccgctttcga gcatgacccc
      901 gaccttcctc gagaccccgg atcgcgtggc tatcttgggt acgcccgggg gcggccggat
      961 catcagcatg gtcctgctcg cggtcctcga tttcgcggcg ggccgtgcgc cgctctcatg
     1021 ggtcagcctg ccgcggtttc atcatcaata tctaccggat caggtcgaat atgagcccgg
     1081 tgcgctcaat gagatggagc aggcggggct caggcgccga ggccataggc ttcaggcatt
     1141 gacccaaagc tacggcaaca tgcaggcgat cctctgggat aagacccgag atatcgtgga
     1201 agcagcaagc gatccacgcg gcgaaggcag cgccaatctc ctgttaccgg ttcaacgctc
     1261 atgccggcat acaacttcta ccccttgccg cgcgtacggg tcttccccgt ctcggcatgg
     1321 gtctcggtga actcgatgat catgcccgca atgtctttgc cggtgacctt ctcgaggctc
     1381 tcgagccccg gggaagagtt aacctcgacc actaggggac cgtgattgga gcgcagaata
     1441 tcgacaccgg ccacgttcaa gcccatcgtg cgggcggccc ggatcgcggt agaacgctct
     1501 tcgggcgtga tcttgatcaa actgatctta ccgccgcgat ggatattgga tcggaactcg
     1561 ccggacttac tctgccgctt tatcgccgcc accaccttgt ctccaatcac aaaacaacgg
     1621 atatccgccc cttgggcttc cttgataaac tcctgcacca gcacgctggc tttcaactcc
     1681 agaaaagatt ggatcacgct ctcggtcgca ttttgcgtct cggccagcac taccccgatc
     1741 ccctgggtgc cctccagcag cttgatcacg agcggaggtc ccccaaccat cttgatcagg
     1801 tcctcgatat cgtccggttt atgggcaaag cccgtgaccg gcagcccaat ccctttgcgg
     1861 gagagtaatt gcaaagcccg caacttatcc cgcgagcgat tgatcgcgac cgactcattg
     1921 agcggataca cgcccatcat ctcgaactgg cgtactaccg cggtcccata gaaggtcacc
     1981 gaagccccga tccgtgggat caccgcatcg aaaccgacca gatcctcacc tttgtagtgt
     2041 atgctgggtt tatgcgaggt gatgttcata taacagcgca gcgcatccag cacccggatc
     2101 gggtgaccgc gcttttgggc tgcctcgacc agacgccggg tggaatagag cttggggtta
     2161 cgcgacaaaa gcgcgatctt cattgagggg ccttcgaacc ctgtaagcta gctcattgat
     2221 cgatgacgtc ggtatccctt tcggtgagcc ccggccagat aagaagcgga ggggtctacg
     2281 atcatgccgc cggcaacgat tgcgcttcgc ccaagtaaca tccgaaacag catatcttcg
     2341 cgattggtca gggtgatctc gatgctccat tcacggccat gcaggcggat gggggtgtga
     2401 atcacaaagc gatcttcacg gtggcctcca gaatcgcaga ccacccggcg atccaccacc
     2461 tgagcgacac agaggatctc cctggcgatg tcccgccgtg aaggatggat ccaaaatcgc
     2521 accttagctt gcccattgtc tgtgaactct tcgagacgaa aggtatgcag aaccgaggta
     2581 cgcgcaccgg tatcaatctt ggccttgatc gccggtatat tgaactctgg cagcgccacc
     2641 cattcgcgcc acccaatccg caaaggttca gttgaagaca atgctgcggc tgcaggaagg
     2701 tctatcctac cagctgaaca gaacccagct cgggaccaca aagtccgagt agatctcact
     2761 catcttggtc tccatccggc catcgccatc ttggtccagc aaataatagg gcgtcccttt
     2821 taccgggatc actttaatca tataaagacg accgcggata cggtactctt cgattgttac
     2881 atctttttta ggaacaatcc tgacatcagg gggctctaaa gcttctccac tttgtacccg
     2941 tgccgatggc tcaggcatat cgggcagaga ttccagtcct tgggggaccc cgggttcagc
     3001 ggcgcacaaa aggcccgcca cactcatacc gagtgcgatt tgagtcggtt tatttattcc
     3061 acgcatgatg gttggtctct tctttggcca ttcaacggtt tctcagagag gcaaaagcat
     3121 ctcctgctcc tctggggagg gtgaaagccc acggtgctcg tagtacttaa agatagcatc
     3181 cactacttcc cagggcttgt ccaccacctc aaagagctgc atatgggccg catcaatcgt
     3241 gccctcgcct actaaggtac ggttaaacca gtcaagaaga ccttgccaga attcatagcc
     3301 caccaaaatg atcgggatct tccgcgtctt gccagtttgg accaaggtca ggatctctgc
     3361 aagttcatct aaggtgccga atcctccggg cagcaccaca taggctgaag cgtacttgac
     3421 aaacatcacc ttgcgcgtga agaagtgtct gaaattaagc gagatattct gatacgtgtt
     3481 ggtctgctgc tcatgaggta ataggatatt aaggcctatg ctcggtgaga gaccggcata
     3541 agcaccttta ttcgctgctt ccatgatccc gggacctcct ccggtcacta ccgaaaaacc
     3601 ggagtccgac aaagcccgtc cgatctcttc ggctaactgg tagtagggat gatccgggcc
     3661 aaagcgggcc gatccaaaga tgctaaccga gggcc
//
LOCUS       DASQSL010000801         1057 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_86683, whole genome shotgun sequence.
ACCESSION   DASQSL010000801 DASQSL010000000
VERSION     DASQSL010000801.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86683"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1057
                     /locus_tag="VE844_08230"
     CDS             <1..>1057
                     /locus_tag="VE844_08230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004594581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042625 - ATPase-coupled ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HZC01335.1"
                     /translation="PHALGLAIPLVVAISTTLAARNGVLVRSRLALEEARLADVVVFD
                     KTGTLTKGEFGVVELKASGEMGADEALALTAAIEGDSEHIIARAIRTEAAARRLALPR
                     VLDFVVFKGRGVQAQVNGQRFSVGGPRLLEMLEATLSPEVADFTAEAGRKGQTVVYLV
                     GDTQVLAAFALADVIRPESREAVRRLKEMGVTVAMLTGDSQAVAEAVAGELGIKTYFA
                     EVLPEHKDQKVAELQAQGRRVAMVGDGINDAPALTRADVGIAIGSGTDVAVESADIIL
                     VQNNPLDVVNVLELSRASYRKMVQNLLWATGYNVVALPLAAGILAPVGILLTPAVGAL
                     FMSLSTIIVAINAQFLRR"
BASE COUNT          208 a          270 c          354 g          225 t
ORIGIN      
        1 ccacatgcgt taggccttgc catccccctc gtggtagcca tcagcacgac cctggctgcc
       61 cggaacggcg tcctggtgcg cagcagactc gcccttgagg aagctcgttt ggccgatgtt
      121 gtcgtgtttg ataagaccgg caccctgacc aaaggtgagt ttggtgtcgt tgagctcaaa
      181 gcctccggtg agatgggtgc ggatgaggcg ttggccctga ctgcggccat tgaaggggat
      241 tcagagcata tcattgctag ggccatccgt actgaggcag cggcgagaag gcttgcgcta
      301 ccaagagtgc tggactttgt ggtgttcaaa ggcagagggg tgcaggcaca ggtgaacggc
      361 cagcgcttct ctgttggtgg cccccgtttg ctagagatgc tggaggcaac tctctctcca
      421 gaggtagccg atttcactgc ggaagctggc cggaaaggac agacagtggt ctaccttgtg
      481 ggtgacacgc aagtactggc tgcctttgca ctcgctgacg tcattcgtcc tgagagtaga
      541 gaggcagtgc gccggctcaa ggagatgggt gttacggttg cgatgctcac tggcgacagc
      601 caggcagtgg cagaggcggt ggctggagag ttgggcatca agacgtactt tgccgaagtg
      661 ctgccagagc acaaggatca gaaagtagca gaactccagg cgcaaggcag gcgggttgcc
      721 atggtggggg atggtatcaa tgatgcaccg gccctcaccc gggctgatgt gggtattgcc
      781 atcggcagtg gcaccgatgt tgctgtggaa tcagcagaca tcatcctggt gcaaaacaac
      841 ccgctggacg tggtgaacgt gctggaactg agccgggcta gctacaggaa gatggtccag
      901 aacctgttgt gggctactgg gtacaacgtg gtagcgctgc ccttggcagc tggcattctt
      961 gctccagtgg gtatcctgct gacgccggca gtgggtgcgc tgtttatgtc cctcagcacg
     1021 atcattgtcg caatcaatgc ccagttcctg cgccggg
//
LOCUS       DASQSL010000802         1084 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_167750, whole genome shotgun sequence.
ACCESSION   DASQSL010000802 DASQSL010000000
VERSION     DASQSL010000802.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167750"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(118..357)
                     /locus_tag="VE844_08235"
     CDS             complement(118..357)
                     /locus_tag="VE844_08235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01336.1"
                     /translation="MTDRDHTTETVTELPTPLSVLYSVVEDAQRYKGFLEENAQGLYD
                     QELADFLMELRDETGRRAKRAESLLAQRLADGGVQ"
     gene            complement(790..>1084)
                     /locus_tag="VE844_08240"
     CDS             complement(790..>1084)
                     /locus_tag="VE844_08240"
                     /inference="COORDINATES: protein motif:HMM:NF044766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01337.1"
                     /translation="GRWLGGEGSEGCGMPKNDLYQDDAERFAKRMISVVYDGALVLMI
                     SIAQRTLPFDAMAQPPPSTSEQLAWITSLNECYVREWLAAMEVGRIVEHDPND"
BASE COUNT          215 a          320 c          304 g          245 t
ORIGIN      
        1 ctccgggccg tcctgtcagc tagccgaggg gttagagtag cttggccata ctacgttatt
       61 ccccggacct cctagaaggg ggtctcggaa gctggacgtg ctagtctcgc taaaacgcta
      121 ctgaactcca ccgtcggcca accgctgggc aagaagactc tcggctcgct tggccctcct
      181 gccagtttca tctcgtagct ccatcaagaa gtcggcaagt tcttggtcgt atagtccttg
      241 ggcattctcc tcgaggaaac ccttatacct ttgggcgtcc tccacaacgc tgtagagcac
      301 gctaagcggg gtgggtagtt ccgtgacagt ttccgtagtg tggtcgcggt cagtcattag
      361 cctccttcgg cggacggacc cactgtgtcc gacactatgt gcaaaatgca tctacacatc
      421 gtaacagact cttctgcgca tgcaagagct tgtaacgcat cggtaaccat tcgtttgctt
      481 tcggctaaca gggcttcaag cggcgataaa gcagttggtg ctaatgcctg aaaggtaaga
      541 cccgcaatcg cttactacag ggccaagcgc gtaagagccc aagctctccc actcgccctt
      601 attaacctaa gtgccaagca ggcgaattaa gcgaacctcg ggtgtagcga tttctacgta
      661 gacctgcgca gggagtgagg gtggggtgtt gtgcccgggc ctcgatcgct aagccttctt
      721 cgcgatgtag tggctgtttg gaagccgtag gggagctact tgatctccac ttccccaaag
      781 gtaataagtt cagtcgttcg ggtcgtgctc gacgatcctg cccacctcca tcgctgcaag
      841 ccactcgcgc acgtagcatt cgttgaggct cgttatccaa gcgagctgct cgctggttga
      901 agggggaggc tgcgccatgg cgtcgaacgg gagggtgcgt tgggcgatcg agatcatcag
      961 cacgagagcc ccgtcgtaga cgacgctgat catacgtttc gcgaaccgct ccgcatcgtc
     1021 ctggtacagg tcgttcttgg gcatgccgca cccttccgag ccctcgcccc caagccaccg
     1081 cccc
//
LOCUS       DASQSL010000803         1429 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_183634, whole genome shotgun sequence.
ACCESSION   DASQSL010000803 DASQSL010000000
VERSION     DASQSL010000803.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1429)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1429
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183634"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..220)
                     /gene="gcvT"
                     /locus_tag="VE844_08245"
     CDS             complement(<1..220)
                     /gene="gcvT"
                     /locus_tag="VE844_08245"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011760829.1"
                     /note="catalyzes the transfer of a methylene carbon from
                     the methylamine-loaded GcvH protein to tetrahydrofolate,
                     causing the release of ammonia and the generation of
                     reduced GcvH protein; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HZC01338.1"
                     /translation="MANKTALYSEHIKLGATLVDFAGWHMPLHYGSQIQEHHQVRREA
                     GMFDVSHMTVVDLDGAGARALLRYLLAND"
     gene            509..>1429
                     /locus_tag="VE844_08250"
     CDS             509..>1429
                     /locus_tag="VE844_08250"
                     /inference="COORDINATES: protein motif:HMM:TIGR00797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HZC01339.1"
                     /translation="MLAAGAGPLIARATGAEDTVTRRALLGEALFGALLLTGVLMIVG
                     IVGAPLIATALGLKGPPAIECIRYLRMLFWTLLPLVLTPLIDQSFISMGNARTPMILH
                     ALSLSLNVILTPILIHSAGLGIAGAALASTLARGAATAIGLWQLRQITGLKLTDLKVR
                     GQLRRIVRIGAPMAIGTACFALVYWGLLKTSVSPLGAHVNAALGIGFSALEGFTWPLF
                     HGLSLGVASLVGRYLGAGRPDLARQAFLTAIPLSTFLGVTVSIVFFLGGTTLTAYFTQ
                     DPAVHQAATEYAVILAASQLFVAWEALAEDV"
BASE COUNT          254 a          450 c          385 g          340 t
ORIGIN      
        1 catcgttggc caaaagatag cgtaacaatg cgcgggcacc tgcgccatcg agatccacca
       61 ccgtcatgtg ggaaacatcg aacattcccg cctcccgacg gacctgatgg tgttcctgga
      121 tctgcgagcc gtaatggagc ggcatatgcc agccggcgaa gtccaccagg gtggcgccca
      181 gcttgatgtg ttcggaataa agcgccgttt tattagccat ggatactgga ggaaatcacc
      241 taaaccgagt attaacaatg ttctcaatgc cgtctgttat attttatttt aagtttacgg
      301 tgagttctaa gcaaaccatg gcgacctccc ccacaatcgg cctccgcccc atcctggcac
      361 tcgcgatccc aagcgcagcc tttactatcc ttaccaacgg ctatcgcgtc gtcgatcaat
      421 acttcagcca ggggatctcg gtcgatgccc aagccgccgt tggatcctca accttcgtgc
      481 tctcatcttc ttctacgccg cctttgaatt gctggcggct ggtgcaggac ccctcatcgc
      541 ccgggccaca ggcgctgagg atacggttac ccgcagggcc ttgctcggtg aggcgctatt
      601 cggtgcgctg ctcttgaccg gggtgctcat gatcgtcggc attgtcggcg ccccactcat
      661 cgctaccgcc ctcgggctta aaggaccacc ggcgatcgaa tgtatccggt acctgcgcat
      721 gctgttctgg accctactgc cgctggtgct taccccactt atcgatcaat ccttcatcag
      781 catgggcaat gcccgtacgc caatgatcct gcacgcgctt tcactgagcc tcaatgtgat
      841 cttaacaccg atcctgatcc atagcgcggg attgggcatc gccggtgccg cgctggcctc
      901 aaccctggcc cgcggggcag ccactgcgat tggcctgtgg cagctccggc agatcaccgg
      961 acttaagctc accgatctta aggtacgcgg tcaactgcga cgcatcgtcc ggatcggtgc
     1021 gccgatggcg atcggaaccg catgcttcgc gctggtttac tgggggcttc tgaagacctc
     1081 ggtgtcaccg cttggtgcgc atgtgaatgc ggcgcttggc atcggcttct cggccttgga
     1141 aggtttcacc tggcccctgt tccatggtct ttccctgggt gttgcttctt tggttggccg
     1201 ctatcttggc gccggcaggc cggatctcgc aagacaagcc ttcttgacgg ccatccccct
     1261 atcgaccttc ctgggtgtga ccgtttcgat agtattcttc ctcggcggca cgaccttgac
     1321 cgcctatttc acccaggatc ccgccgtgca tcaagcggct accgaatatg cagtgatcct
     1381 tgcagcctcg cagcttttcg ttgcttggga ggcgcttgcc gaagatgtg
//
LOCUS       DASQSL010000804         1303 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_101360, whole genome shotgun sequence.
ACCESSION   DASQSL010000804 DASQSL010000000
VERSION     DASQSL010000804.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1303
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101360"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(124..606)
                     /locus_tag="VE844_08255"
     CDS             complement(124..606)
                     /locus_tag="VE844_08255"
                     /inference="COORDINATES: protein motif:HMM:NF024752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC01340.1"
                     /translation="MERPQDPIEQTRCYSGKKKCHTVKNVLLINAALTILFLSHTYVG
                     STHDKRIADATPYPLPAGSRLLQDLGFLAFTLDQVDVIMPTRKPRGRALTRAQKTANR
                     RIARRRVRIEHVNSSVKPCRIVHDTSRLRKMGVRDRVMDVCCALHNFRVRLTPWQPMV
                     "
     gene            complement(537..1136)
                     /locus_tag="VE844_08260"
     CDS             complement(537..1136)
                     /locus_tag="VE844_08260"
                     /inference="COORDINATES: protein motif:HMM:NF025000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC01341.1"
                     /translation="MGSLRFAELQGRPTEVLDLTSLTLDEFQRLVPPFEAAFEAHMAE
                     WRLDGRPRTARRYTTYTNCPLPTPEDRLLFILVYLKAYPLQVVQGRLFGMGQSKAHQW
                     IHVLLGVLQATLRALGDAPARSVKELAQRLKVAEAAAAAVFVPTPVSPTASTLPAAAS
                     TPVPAFPLLGTMAPNGALSAPRTRLNRRAVIAARKNATR"
BASE COUNT          271 a          377 c          386 g          269 t
ORIGIN      
        1 gtcgtctccc caaaacttga ttttttgtct ttcgtctccc caaagcttga aagtcgtctc
       61 cccaaaactt gattctgtct cttcgtcttt aacgcttttg gcaggtatta aagttcattc
      121 cgattaaacc attggttgcc acggagtgag acgtacccga aagttatgca aggcacagca
      181 gacgtccatc acacgatcgc ggacgcccat cttgcggagg cggctcgtgt cgtggacgat
      241 gcgacagggc ttgacgctgc tgttgacgtg ctcgatgcgc acgcgacggc gggcaatacg
      301 ccgattcgcg gttttctgcg cgcgcgtgag cgctcggcca cgcggcttcc gggtgggcat
      361 gatgacgtcg acctggtcga gcgtaaacgc taggaagcca agatcctgaa gcaaacggct
      421 gcccgcgggc aagggatagg gcgtggcatc cgcaatccgc ttatcgtggg tgctgccgac
      481 ataggtgtga ctcagaaaga ggatcgtgag cgccgcgttg atcagcagca cgtttttcac
      541 cgtgtggcat tttttcttgc cgctataaca gcgcgtctgt tcaatcgggt cctgggggcg
      601 ctcaatgcgc cgttcggtgc catcgtgccc aaaaggggga aggcgggcac gggtgtggac
      661 gccgccgcag gtagagtgga cgcggtcggt gacaccggtg taggaacgaa caccgctgcc
      721 gctgctgcct cggccacctt gagacgttgg gccaactcct tcacggaccg ggcaggagca
      781 tctcccagcg cgcgcagcgt cgcctgcaga acccccaaca ggacgtgaat ccactgatgg
      841 gccttgctct ggcccatccc gaacagccgc ccctgcacca cttggagagg atacgccttc
      901 aggtagacca ggataaacag cagccgatcc tccggggtcg gcaacggaca gttcgtatag
      961 gtcgtgtacc ggcgggcggt gcgcggccgc ccatcgaggc gccattcggc catatgcgct
     1021 tcgaacgcgg cctcaaaggg cgggaccaag cgctgaaact catccagggt gagactggtc
     1081 aaatcgagta cctcggtcgg gcggccctga agctcggcga accgtaaact ccccatggct
     1141 gtgacctccg ttcatcggag gcacaggata ccataaatcg gaatgaactc tattgcctat
     1201 atttcagtat aggaaaatgg ccgaaaaaat tatacaggga tgcctgtctt aaaagatcgc
     1261 cagctgtcca ttcttcttct gctcctgccg cttaaaatgc aag
//
LOCUS       DASQSL010000805         1251 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_86734, whole genome shotgun sequence.
ACCESSION   DASQSL010000805 DASQSL010000000
VERSION     DASQSL010000805.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1251
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86734"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            136..>1251
                     /locus_tag="VE844_08265"
     CDS             136..>1251
                     /locus_tag="VE844_08265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015830387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HZC01342.1"
                     /translation="MQSEIQEQGIVLPRQTVSILIVEDEDLFAKAVKKRLTKAGFYCD
                     IAGTLNQAIQQFQASEPSLILLDMRLPDGSGLDFLSYLREQKASETPILVLSAYGEVE
                     DVVAAMKLHASDYLKKPIDLDELLITIEKILAKEATARQLEYSRKRERHAAEDIELLG
                     ESPGIKRLREQARHIGSLCSTVDIVPPTVLILGETGTGKDLMAKLLHRYSARWDRPFV
                     HIDCTSLPKELIEAELFGHEKGAFTSAFSARTGLIEAAEAGVLFLDEIVELPLDLQTK
                     LLAVLERRVLRRVGSTQERPVAAWFIAATNRPIEEMVRSGQMRSDLYFRLNVLSLRMP
                     TLRERVEDIVLLATYFAEQTARRYRLLPPIILPEAYAA"
BASE COUNT          276 a          354 c          346 g          275 t
ORIGIN      
        1 ttgtgcttgt ctcatcatcc ggccagtccg ctcgatgaga cggaggtttt gaaacgtgcc
       61 gtacgctcac acgggctgct gtttgccctg gataaatacc aacggttcgg ctagcaaatc
      121 gcaggcaaag gccacatgca aagcgaaatc caagaacaag gcatcgtcct gccgcggcaa
      181 acggtctcta tcctgatcgt cgaagacgag gatctgtttg ccaaggcagt taaaaaacgg
      241 cttaccaagg ccggcttcta ctgtgatatc gccggcacct tgaatcaggc catccagcaa
      301 ttccaagcct ctgagccgag cctgatactt ctagacatgc gcctgcccga tggttccggg
      361 ctcgattttt taagctatct gcgcgagcaa aaggcttcgg agacgccaat tctcgtgctc
      421 tctgcttatg gcgaggtgga ggatgtggtc gccgcgatga agctacacgc ctcggattat
      481 ctaaaaaagc ccattgatct cgacgagcta ctgatcacta tcgaaaagat cctagccaag
      541 gaagccactg cccgccagct cgagtactcg cgcaaaaggg aacgccatgc ggcggaggat
      601 atagagctgc tcggcgagtc ccctgggatc aaacggctcc gcgagcaggc ccgccatatc
      661 gggtccttat gcagcacggt agatatcgtt ccgcctactg tccttatcct cggtgagaca
      721 ggcaccggca aagacctgat ggcaaaactg ctgcatcgct atagtgcccg ttgggatcgg
      781 ccctttgtcc atatcgactg tacctccctg cctaaggagt tgattgaagc cgagctcttc
      841 ggccatgaaa aaggtgcctt caccagtgcc ttttccgcgc gcaccggtct catcgaagcg
      901 gccgaggcag gtgttttgtt cctggatgag atcgtcgaac taccgctgga tctacaaacg
      961 aaactgcttg cagtcttgga gcgcagggtc ttgcgtcggg tcggcagtac ccaggaacgg
     1021 ccggtcgcgg cctggtttat cgccgctact aaccgtccga ttgaagagat ggtgagatcg
     1081 gggcaaatgc gctcggatct gtacttcaga ctgaatgtgt tgagcctcag aatgccgact
     1141 ctgcgcgagc gggtagagga tattgtgctt ctggccacgt attttgccga acaaaccgcc
     1201 cgccgctata ggctgctccc gccgataata ttgcccgagg cttatgccgc g
//
LOCUS       DASQSL010000806         1544 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_183660, whole genome shotgun sequence.
ACCESSION   DASQSL010000806 DASQSL010000000
VERSION     DASQSL010000806.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1544
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183660"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1544
                     /locus_tag="VE844_08270"
     CDS             <1..>1544
                     /locus_tag="VE844_08270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012873715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="protein prkA"
                     /protein_id="HZC01343.1"
                     /translation="NPTLAQLAHARIYDMVRSYGVDIDEQGNERFHFFARELFGIDDA
                     LAKVVEYLKAAAVGSEVGKRILMLYGPPSSGKSQLVILLKRGLEEYTHTDNGAVYAIA
                     DCPQHETPLHLIPHALRKDFLDDYGIYIEGELCPMCALNLREKYENDIYRVPVKRIFF
                     SEKDRIGIGTFVPSDPKSQDISELVGSIDLATVGEFGSESDPRAYRFDGELNIANRGM
                     IEFIEMLKADERFLYILLTLTQEKNIKTGRFSLIYADEFVIAHTNEAEFKEFLADKKS
                     EALQDRMIMVQMPYNLKVSAEIRIYEKLLKRASIGNIHIAPHSLDVAAMFAVLSRLEE
                     PKMAGLTLVKKMRLYDGQEVEGFRQKDIKLIKGQTEREGMDGISPRFVINRISSSLIR
                     PNTKCINPIDVLRAIKDGFDTHSSFKREDREKFDNLIADVRREYDEIAKNDVQKAFFV
                     SFEQEALTLLDNYLDNVEAYLDDKKFIDPLTEEERDPDEKLMRSIEDKVKVPESGKDA
                     FRNEIF"
BASE COUNT          377 a          448 c          417 g          302 t
ORIGIN      
        1 agaaccctac actagcgcaa cttgcccacg ctcgtatcta cgacatggtc cgctcctacg
       61 gtgttgacat cgacgaacag gggaatgaac gctttcactt cttcgcgcgg gaactctttg
      121 gcatcgatga cgcgctggcc aaagtggtgg aatacctcaa agcagccgcc gtggggtctg
      181 aggtcggcaa acgcatcttg atgctctacg gaccgccgtc ctcgggaaag agtcaattgg
      241 tcatcctgct caaacgcggg ctggaggagt atacccatac cgataacgga gccgtatacg
      301 ctatcgccga ttgtccccag cacgaaaccc ccctgcacct gatcccacac gcactgcgca
      361 aagacttcct ggacgactac ggcatctaca tcgaaggcga gctgtgcccg atgtgtgcgc
      421 tcaatctccg ggagaagtat gagaacgata tctaccgcgt gccggtgaaa cgcattttct
      481 tctcggagaa ggatcgcata ggcatcggca cctttgtgcc ctccgacccc aagagccagg
      541 atatttccga acttgtcggc agcatcgatc tggccaccgt cggcgagttt ggcagtgaat
      601 ctgacccgag ggcctatcgg ttcgacggcg aactcaacat cgccaaccgt ggcatgatcg
      661 agttcatcga aatgctgaag gctgacgagc gctttctcta tattctgctg acactgacgc
      721 aggagaagaa catcaagacc gggcgtttct cgctgatcta tgccgatgaa ttcgtgatcg
      781 cacacaccaa tgaggccgag ttcaaggaat ttctcgccga caagaagtcg gaggcgctgc
      841 aggaccgcat gatcatggtg cagatgcctt ataaccttaa ggtatcagct gagatcagga
      901 tctatgaaaa gctcctgaag cgggccagca tcggcaacat ccatatcgcc ccgcattcgc
      961 tcgatgtggc ggcgatgttc gccgtcctgt cgcgccttga ggagcccaag atggccggtc
     1021 tgaccctggt caagaagatg cggctgtacg acggccaaga ggtcgaaggc tttcgccaga
     1081 aggacatcaa gctcatcaag ggccagaccg agcgcgaggg catggacggc atctcaccgc
     1141 ggtttgtgat caaccggatt tcttcatcgc tcatccgccc gaacaccaaa tgcatcaatc
     1201 ccatcgacgt cttgcgtgcc atcaaggacg ggtttgacac gcacagctcg ttcaagcgcg
     1261 aggatcgaga gaagttcgac aacttgatcg ccgacgtccg ccgcgaatac gacgaaatcg
     1321 ccaagaacga tgtgcagaag gcgttctttg tgtcgtttga acaggaagcg ttgacgttac
     1381 tcgacaacta cctcgacaac gtcgaggcct acctcgatga caaaaaattc atcgaccccc
     1441 tcaccgagga agagcgcgac ccggacgaga aactcatgcg ctccatcgag gacaaggtca
     1501 aagtgccgga gagcggcaaa gacgccttcc gcaacgagat cttc
//
LOCUS       DASQSL010000807         1856 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_86738, whole genome shotgun sequence.
ACCESSION   DASQSL010000807 DASQSL010000000
VERSION     DASQSL010000807.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1856
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86738"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..187)
                     /locus_tag="VE844_08275"
     CDS             complement(<1..187)
                     /locus_tag="VE844_08275"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HZC01344.1"
                     /translation="MEIIRRDYPDLPQPAGAFHHSVRWGNLLFIAGSTARGTSAETGD
                     IAAQTEAIIRKFQHILEA"
     gene            complement(265..1665)
                     /locus_tag="VE844_08280"
     CDS             complement(265..1665)
                     /locus_tag="VE844_08280"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HZC01345.1"
                     /translation="MDKADIPHLSATELSELVRKREVSPVDVVEAYLERIDLLNDKLN
                     AYITVCHGEALEAARQAEQAIALGNYLGPMHGVPVTVKDQAHTKGIRTTFGSPIFADF
                     VPDEDATVISKLKASGAILLGKSNMTEFGTTGFSHQFDTPRNPWDLERYTGGSSSGSG
                     AATAGFLCATSLGEDTGGSIRGPAAWCGLVGLRPSWGRVSRYGVRPGSWTMDTMGPIS
                     RTVADCALTIQTIAGHDPKDPFTWQCPVPDYLRALDGDIRGLKVGIITDLLYSERVDR
                     EVRDAVVQAKSVLGELEAEVEDVSIPLAVHAQTISSALRVEAPVTYGELLRNRLQEIG
                     HDNRISYLVGSVLPAQAYYKAQKLRVMLRQQVLAALERFDVLVLPTSASVAPKVEPDP
                     VIDSKEKAFRNSASLTPIFSLASTPALSINCGFNSQGLPIGLQIGGRIFDEETVLKVA
                     YAYEQSTPWHNRKPPL"
BASE COUNT          370 a          546 c          540 g          400 t
ORIGIN      
        1 tggcctccag tatgtgctgg aacttccgga tgatagcctc ggtctgagcg gcgatatcac
       61 cggtctcggc ggacgttcct cgggccgtgc tgccggcgat aaaaagcaga ttaccccaac
      121 ggaccgaatg gtgaaaggcc cccgctggct gcggcaaatc cggatagtcg cgtcggatga
      181 tctccataat gtttcacctc atgttgttat tcagataact ctctagccca gcggaataga
      241 cattcgtcgc ccatctgctc ccgtctatag gggcggcttt ctattgtgcc agggtgtgct
      301 ttgttcgtag gcataagcca ccttgagtac cgtctcctca tcaaagatcc tacccccaat
      361 ttgaaggccg atgggtaggc cctgggaatt gaacccgcag ttgatgctca aagccggggt
      421 actggccagg ctaaagatgg gggtcaggct ggcggagtta cggaaggctt tctccttgct
      481 gtcgataacc gggtcgggct ctaccttcgg ggccactgaa gcggaggtgg gaagtaccaa
      541 gacatcgaac ctttccaggg cggcaaggac ttgctggcgc agcattaccc tgagcttctg
      601 cgccttgtaa taggcctggg ccgggagtac gctgcctacc agatagctga tgcggttgtc
      661 gtgcccgatc tcctgtaacc ggttgcgcag taactccccg taagtcaccg gggcttccac
      721 ccttaaagct gaggaaatcg tctgggcgtg cacggcgaga gggatggaga catcctctac
      781 ctccgcctcc agctctccta gcacggactt agcctgcacc accgcatccc ggacctcgcg
      841 atccaccctt tctgaataca gcagatcggt aataatgccc accttcaagc cccggatgtc
      901 gccgtccaga gccctcaggt agtccgggac cggacactgc caggtaaagg ggtctttggg
      961 gtcgtggccg gcgatggtct gaatggtcag tgcacagtct gcaactgtcc tggatatggg
     1021 acccatggtg tccatggtcc agctgcccgg ccttactccg taccggctga cccggcccca
     1081 ggatggcctg agtccgacca ggccgcacca ggcggccggc ccgcggatgg aaccgccggt
     1141 gtcttccccc agggaagtag cgcacaagaa gccagcggta gccgccccag agccgctgct
     1201 ggagcccccg gtgtaacgct ccaggtccca cggatttcgt ggggtgtcga actggtggga
     1261 aaatcccgtg gtgccaaact cggtcatatt tgacttgccg aggagaatgg ctcctgacgc
     1321 cttgagcttg gatataacgg tggcgtcctc atccgggaca aagtcggcga atatgggaga
     1381 cccgaaggta gttcggatcc ccttcgtatg ggcctggtcc tttactgtca ccggaacacc
     1441 gtgcatgggg cccaggtagt tacccagggc gatggcctgc tccgcttggc gagcggcttc
     1501 cagcgcttcg ccgtggcaca cggtgatata agcgttgagc ttatcattca gcagatcaat
     1561 gcgctccagg taggcctcca ccacatccac gggggagact tccctttttc tgacgagttc
     1621 ggacagttca gtggctgaaa gatgggggat atctgctttg tccacttttc actcctttct
     1681 ccatctatag caaatgaagc cctgggtgag gagccccgct gttggccgat tccacgggag
     1741 taaatctcac cggagagtca ttaacaaatc taggtcacgg catctgcaag acccgctgta
     1801 gaattgtgcc agcttcccta gctacagact gcgctttggc ccggaataac agccaa
//
LOCUS       DASQSL010000808         1670 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_183668, whole genome shotgun sequence.
ACCESSION   DASQSL010000808 DASQSL010000000
VERSION     DASQSL010000808.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1670
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183668"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..659)
                     /gene="atpB"
                     /locus_tag="VE844_08285"
     CDS             complement(<1..659)
                     /gene="atpB"
                     /locus_tag="VE844_08285"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HZC01346.1"
                     /translation="MKEPFLYLTIPGLEMYPHVTYMWVVMILLLGVAYLTTRRLQLVP
                     GTAQALMEIILEGLLGLMERVMGHHAKRHLPVIGGIALFIVVSNLAGIVPPLFSPTVN
                     INITAGCAITIFLYYQYIGFRRNGVAYLKHFTGPVWWLAPLMLPIELISHVIRPFTLA
                     LRLFANMRGHEIVLIIITLLVPIVAPLVIVVQGIFVSFIQGFVFILLSMIYIAGAEEE
                     H"
     gene            complement(663..1055)
                     /locus_tag="VE844_08290"
     CDS             complement(663..1055)
                     /locus_tag="VE844_08290"
                     /inference="COORDINATES: protein motif:HMM:NF015834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase subunit I"
                     /protein_id="HZC01347.1"
                     /translation="MVGDSGLLKRVEWYGWVLTGVLSVAALVTGYPLVSRGCAIGGTL
                     SVLHFKWLALFLTALVDPRKRRYSGVTKLALGAYVAKYLIIAGVVYVLFRYQVVEPLG
                     FLGGLSVTFLAICLAGIRRPRQLSEPQG"
     gene            complement(1062..1292)
                     /locus_tag="VE844_08295"
     CDS             complement(1062..1292)
                     /locus_tag="VE844_08295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011339660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HZC01348.1"
                     /translation="MANDGPNLKYEILRQFGILGSVGLHLVLGTFTGLAIGYFLDRYL
                     GTKPWLTLVFLGFGVAAGFINLFRVMRRQREG"
     gene            complement(1350..>1670)
                     /locus_tag="VE844_08300"
     CDS             complement(1350..>1670)
                     /locus_tag="VE844_08300"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HZC01349.1"
                     /translation="ELAAQGEKLYWEKYPCFTCHQIQGKAGGAAVGPDLTDAWKRLNP
                     DWMVQWIKNPQAFDPATLMPNLGVTDAEAMALVAYLEGVSRQMTAEAGGAAGGQVTPE
                     AKPQ"
BASE COUNT          392 a          529 c          442 g          307 t
ORIGIN      
        1 tgatgttcct cttctgcgcc tgcgatgtag atcatcgaca acaggatgaa cacgaagccc
       61 tgaatgaagc tcacgaaaat cccctgtacc acgatcacca gaggggctac gatcggcacc
      121 aacagtgtga tgatgatgag gacaatttca tgcccgcgca tattggcgaa caaccgcaac
      181 gccaaggtga acggcctgat gacatggctg atgagttcga tcggcagcat cagcggtgcc
      241 agccaccaca ccggtcccgt gaagtgcttg aggtacgcga caccgttccg gcggaacccg
      301 atgtattgat agtacagaaa aatggtgatg gcacaccccg cggtgatatt gatattcacc
      361 gtcggtgaga ataacggcgg cacaatcccc gccaggttgg acaccacgat gaacagggcg
      421 atcccgccga tcacgggcag atgccgtttg gcatgatgcc ccatgacgcg ctccatcagt
      481 cctaagaggc cttcgagaat aatctccatc agtgcctgcg ctgttccggg cactagctgc
      541 aaccgtcgcg tcgtgagata ggcgacccct agcaggagaa tcatgaccac ccacatatag
      601 gtgacgtggg ggtacatttc cagacctgga atggtgaggt acaggaacgg ttctttcatc
      661 gcttacccct gcggctcgct cagttgtctt ggtcgccgaa tgcccgcgag gcagatggcc
      721 aaaaaggtca ccgacaaccc gcccaaaaag cctaacggct cgaccacttg atagcggaac
      781 agcacgtaca caacccctgc aatgatgagg tacttggcga cataggcacc aagcgccagt
      841 ttggtgacgc cgctgtatcg acgttttcga gggtctacga gcgcggtgag aaacaacgcc
      901 agccacttaa aatgcagcac gctcaaggtg ccgccgatgg cacagccacg gctcacaagg
      961 gggtaaccgg tcacaagggc cgcaacgctg agtacgcctg tcaataccca gccataccat
     1021 tcgacacgct tcagcaggcc cgagtcgcca accacagggc tttatccctc gcgctgccgc
     1081 cgcatgacac gaaagagatt gataaacccg gcggccacgc caaaccccag aaacactaat
     1141 gtcagccacg gtttcgtccc gaggtaacgg tcgagaaagt agccgatcgc caacccggtg
     1201 aacgtaccca acaccaggtg caagccgaca cttcctaaaa tcccgaactg gcggaggatt
     1261 tcatatttca gattcggccc atcattcgcc ataaccccct cggcatctcg atgagccctt
     1321 gttctagggc gtaataccca cccgcgccgt tactgtggct tggcctcggg cgtcacctgc
     1381 ccgcccgccg cgccgccggc ctccgccgtc atctgccgcg acaccccctc cagataggcc
     1441 accagagcca tcgcctccgc atctgtcacg ccgagattcg gcatcagggt tgccgggtca
     1501 aaggcctggg ggtttttaat ccattgcacc atccagtcgg ggttcaagcg cttccatgca
     1561 tcggtcaaat ccggacccac agccgcaccg ccggccttcc cctggatctg gtggcaggtg
     1621 aagcagggat acttctccca atagagtttc tcgccttgag cggccaattc
//
LOCUS       DASQSL010000809         1482 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_195223, whole genome shotgun sequence.
ACCESSION   DASQSL010000809 DASQSL010000000
VERSION     DASQSL010000809.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1482
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195223"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1482
                     /locus_tag="VE844_08305"
     CDS             <1..>1482
                     /locus_tag="VE844_08305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012642099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HZC01350.1"
                     /translation="LTSAFFNIVIPLAIGARDVAFPRLNAFSYWTFLFGALLLHASFL
                     TMQPPAAGWFSYANLTEKPFSPGQGLDYWALSLQVLGVASMAAAFNFIVTIVNMRAPG
                     MSLMRMPLFVWMTLVTSILIVLAFPVLTVGLIELTFDRLFGTNFFRASEGGDPVLWQH
                     LFWIFGHPEVYILILPAMGVVSEVLPAFSRKPLFGYPFVVFSGISIGFMGWTVWSHHM
                     FTVGLGPIANSAFMISTMLIAVPTGVKIFNWIGTMWGGSIDLKTPMLFAIGFIALFIV
                     GGLSGVSHAVAPHDAQQQDTYYIVAHIHYVLFGGALFGLFAGIYYWFPKMTGKLLDET
                     LGKWHFWLFFIGMNITFFPMHYVGLNGMPRRIYTYAEEFGWEGLNLLSTIGYFIIFIG
                     VLVFIVNFLRSVRSGQESGHDPWDAPGVEWSISSPPPAYNFARIPRIVGRDHYWIVKR
                     RAEAEGQPITGPETHVDPRTIHMPSPSYWPIVVSFGLAWLAAGF"
BASE COUNT          247 a          429 c          411 g          395 t
ORIGIN      
        1 ttaacctccg ccttcttcaa cattgtgatc ccgctagcta ttggtgcccg ggacgtggcc
       61 ttcccccggt tgaacgcctt cagttactgg actttcctgt ttggcgcttt gctgctccac
      121 gccagcttcc tgaccatgca acctcccgcc gccggctggt tctcctatgc caatctgacg
      181 gaaaagccgt tcagccccgg ccagggcctg gactactggg cgctgagttt gcaggtacta
      241 ggcgtagcct ccatggcggc ggcctttaac ttcatcgtca ccattgtcaa catgcgggcg
      301 ccgggcatga gcctgatgcg catgcctctc ttcgtctgga tgaccctagt cacctccatc
      361 ttgattgtcc tggccttccc cgtccttacc gtcggcctga tcgagctaac ctttgaccgt
      421 ttgttcggga ccaatttctt ccgggccagc gaaggcggcg acccagtgct gtggcaacac
      481 ttgttctgga ttttcggtca cccagaggta tacattctga ttctgcccgc catgggtgta
      541 gtatctgagg tgttgcctgc cttctccagg aagcctctgt tcggctaccc ctttgtcgtg
      601 ttctcgggca tcagcattgg gtttatgggc tggacggtct ggagccacca catgttcacg
      661 gtaggactgg ggcccatcgc caactcggcg ttcatgatct ccaccatgct aatcgccgtc
      721 cccactggtg taaaaatctt taactggatt ggcaccatgt ggggtgggtc tattgacttg
      781 aaaacaccta tgctgtttgc catcggtttc attgcattgt tcatcgttgg cggactaagt
      841 ggagtgtccc acgctgtagc gcctcacgat gcccagcagc aggacaccta ctatattgta
      901 gctcatatcc actacgtgct gtttggcggg gcgctttttg gcctgtttgc cggtatttac
      961 tactggttcc ccaagatgac cggcaagttg ttagatgaga ccctgggcaa gtggcacttc
     1021 tggctgttct ttatcgggat gaacatcacg ttcttcccca tgcactacgt ggggttgaac
     1081 gggatgccgc gccggattta cacctacgct gaggagttcg gctgggaagg tttgaacctg
     1141 ttatctacca ttgggtactt cataatcttt attggggtcc tggtgttcat tgttaacttc
     1201 ttgcgcagcg tgcggagtgg ccaggagtcc gggcatgacc cctgggatgc cccaggggtg
     1261 gagtggagca tctcctcgcc gccgccagct tacaactttg cccggattcc ccggatagta
     1321 gggcgggacc actactggat cgtcaagcgt cgggccgagg cagagggcca gccgataaca
     1381 gggccggaga cccatgtgga tcctcgtacc atccacatgc ctagcccgtc ttactggccc
     1441 atcgtggtgt cctttgggtt ggcctggctg gctgctgggt tt
//
LOCUS       DASQSL010000810         1206 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_74746, whole genome shotgun sequence.
ACCESSION   DASQSL010000810 DASQSL010000000
VERSION     DASQSL010000810.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1206
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74746"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1206
                     /locus_tag="VE844_08310"
     rRNA            <1..>1206
                     /locus_tag="VE844_08310"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          300 a          309 c          396 g          201 t
ORIGIN      
        1 actccgaatg ccgttattcc agagcgtggc agtcagactg cgggggataa gcttcgtggt
       61 cgaaagggaa acagcccgga ccgtcggcta aggcccctaa ttccatgcta agtgggaaac
      121 gatgtccgat tgcacagaca accaggatgt tggcttagaa gcagccacca ttcaaagagt
      181 gcgtaacagc tcactggtca agtggtcgag cgcggacaat tcaacggggc tcaagctagg
      241 aaccgaagcc gcggacttcg cgcttgcgcg gagtggtagg ggagcgttcc caagccggcg
      301 aagcggcggc gtaagccagc cgtggaggct tgggaagtga gaatgctggc acgagtaacg
      361 aaagagacgt gagaaacgtc tccgccgaat gcctaagggt tcctgagtaa agctaatctg
      421 ctcagggtta gtcgggacct aagccgaggc cgaaaggcgt aggcgatgga caacaggttg
      481 atattcctgt accacgtacc caccgctatc accgatggcg ggacggggta ggctaaggaa
      541 gcccaggcga tggtcgtcct ggggtaaccg cgtagggcgg ccggtaggca aatccgccgg
      601 ccatcaagcc tgagacggga tgccgagccc ccacaagggg cgaagttcct gaagccatgc
      661 ctccgagaaa agcgtctagg gaggtggggc gtgcccgtac caaaaccgac acaggtagac
      721 aggtagagaa taccaaggcg atcgggagaa ccctcgaaaa ggaactcggc aaaatggccc
      781 cgtaacttcg ggagaagggg cgccccggta gagtgaagcc cttttcgggc ctagctcgag
      841 ggggccgcag tgaaacggcc caagcgactg tttaccaaaa acacaggtct ctgcgaagtc
      901 gaaagacgac gtataggggc tgacgcctgc ccggtgccgg aaggtcaagt ggagaggtta
      961 gccttcgggc gaagccttga aactaagccc cggtaaacgg cggcggtaac tataaccgtc
     1021 ctaaggtagc gaaattcctt gtcgggtaag ttccgacctg cacgaatggc gcaacgactt
     1081 gggcgctgtc tcaacgaggg atccggtgaa attgaagtct cggtgaagat gccgagtacc
     1141 cgtggctgga cggaaagacc ccgtgaacct ttactgcagc tttgcgttga agtctgggac
     1201 tcgtcg
//
LOCUS       DASQSL010000811         1231 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_112879, whole genome shotgun sequence.
ACCESSION   DASQSL010000811 DASQSL010000000
VERSION     DASQSL010000811.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1231
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112879"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1231
                     /locus_tag="VE844_08315"
     CDS             <1..>1231
                     /locus_tag="VE844_08315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01351.1"
                     /translation="ARMVRSQLKPKLILWRCVDILVRAKIEVPNYFRLAKLILSAING
                     RNRELTAIIERTLDADTRALLDALLIQETAADGAAPGRTSAYKLTLLKKLSQSTKPSK
                     VKERVGDSLLIEGLYQRLQPVLAVLALNPEGIRYYANSVIKVDIFQVARRDDEDRYLH
                     LIAFIAHQYYRLQDNLVDVLLTSLASYQNSSQREHKEQCYARRAQRNQSIKALVGYMD
                     EDLLKVLAAIRTITDEPCLSAAEKVDRIRALLATQDANQHHAKVDLTRLKRELETELS
                     EDDYHRILEAKSIRIQNRISPIIKALTFQGEPNAREVLAAIQYFKDKDGLIDKAAPLG
                     FLAADERTAVTEGGKFRISLYKALLFLHIQSAIKSGTLNLDQSYKYRPLDDYLIARER
                     WHRDKEVLLERAGLQAAA"
BASE COUNT          285 a          370 c          347 g          229 t
ORIGIN      
        1 tgcgcgcatg gtccgctccc aacttaaacc caaactgatc ctgtggcgtt gcgtcgacat
       61 cctggtacgg gcaaagatcg aagtgcccaa ctatttccgc ttggccaagc tgatcttgag
      121 tgcgatcaac ggccgcaacc gggagctgac cgccatcatc gaacggacgc tcgatgcgga
      181 tacacgggca ctgctggatg ccctgctgat acaggagacc gcggccgacg gtgcagcgcc
      241 ggggaggacc agtgcgtata agctgacact gctgaagaag ctctcgcagt cgaccaagcc
      301 gtccaaagtg aaagaacggg tgggcgattc tctcctcatc gaggggctct accagcgtct
      361 ccaaccggtg ctggccgtgc tggcacttaa cccggaaggt atccgttact acgctaatag
      421 cgtcattaaa gtagacatct tccaggtcgc ccggcgcgac gacgaagacc gctacctgca
      481 tctcatcgcc ttcatcgccc atcaatacta tcgcctgcag gataatctgg tcgatgtgct
      541 gctcactagc ctggcgtcct atcaaaacag ctcccagcgt gagcataaag agcagtgcta
      601 tgcgcgtcgc gcgcagcgca accagtcgat caaagccctg gtgggctata tggacgagga
      661 tctgctgaag gtgctggcgg cgattcgcac gattaccgat gagccgtgcc tcagcgctgc
      721 cgagaaagtc gaccgcatcc gggcactgct ggcaactcag gacgctaatc agcatcacgc
      781 caaggtcgat ctgacccgct tgaaacgcga gctggagacc gaactcagtg aagacgacta
      841 ccaccgcatt ttggaggcga aatcaatccg tattcaaaac cgcatcagtc cgatcataaa
      901 agcattgacc ttccaaggcg aacccaacgc ccgagaggta cttgccgcga tccagtactt
      961 caaggacaaa gacggcctca tcgacaaagc ggcaccgctg ggctttctgg ccgccgatga
     1021 acgcacggcg gtgactgaag gtgggaaatt ccgcatctcg ctgtacaagg cgttgctgtt
     1081 tctgcatatc cagagcgcta tcaagtcggg caccctgaac ctggatcagt cctacaagta
     1141 ccggccgctg gatgattacc tgatcgcgcg cgagcgctgg caccgcgata aggaggtgct
     1201 gctggagcgg gcaggtcttc aggccgcagc c
//
LOCUS       DASQSL010000812         2971 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_183689, whole genome shotgun sequence.
ACCESSION   DASQSL010000812 DASQSL010000000
VERSION     DASQSL010000812.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2971)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2971)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2971
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183689"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..697)
                     /locus_tag="VE844_08320"
     CDS             complement(<1..697)
                     /locus_tag="VE844_08320"
                     /inference="COORDINATES: protein motif:HMM:NF013916.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-bisphosphate aldolase"
                     /protein_id="HZC01352.1"
                     /translation="MNGAELRLGRLFNRESGRTFIVAIDHGLAIGVPPGAEDAVGTVD
                     SIISYNPDGIFVSPGLLSRAGHLFAFRGAPEPILRIDFLLLDERLKYLGEQHRMLCSP
                     QDAVNLGAEAVAMFLVFGVERGGMFADNARAVTLAAREAHRAGLPLIVETVPWGSRIN
                     DRRDPDLLAFGCRMAAELGADAIKTEYTGDPETMASVVEGCPAPVLVLGGPKIDSEND
                     LIESARGAMTAGAK"
     gene            complement(850..1701)
                     /locus_tag="VE844_08325"
     CDS             complement(850..1701)
                     /locus_tag="VE844_08325"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HZC01353.1"
                     /translation="MFGKGSSKASRARRRNDVLAFVALLAYTLFALFPLFWIFLLSLK
                     TQRDVIATPPKFFFTPTFQNYAEVLSRPDFLTPFKNSVIVTSGSLLLSALIALPAAYA
                     LARMEFRGKEDLAFSFLSLRFAPELIILLPLFVIYQSFGLYDTYIGLILVYQLITFPL
                     MVWMMRSFLEDVPKELEEAVQIDGGSWFTSFRMIITRIALPGLAASCVLSFIYAWNHF
                     VFALVLASQRTQVITGGLLQFISFEQIQWGAMAAGVMLAIIPEFIIAVFALRYMIRGL
                     TAGTVKG"
     gene            complement(1703..2566)
                     /locus_tag="VE844_08330"
     CDS             complement(1703..2566)
                     /locus_tag="VE844_08330"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HZC01354.1"
                     /translation="MNTSRRLPYLLMLPGIALLLAVLYPFLSGVYWSFTNFDLTLGQN
                     PAFSGLTNYLQAFALSGEGLHAILVTFAYAALAVAVQTLLGFGVALLLMREGLHIRFF
                     RALIVLPLLMPPVIATMMWRVMMTPDGVLNYMLSWVYLPAFDWLGSTSTALFSVVLID
                     TWIYTPFVILILLAGMQSIPTEVHEAARVDGASYLREIWNLVVPLLRPFFIIVIVFRG
                     IDSLKMFDIIYTATRGGPINATMNLHVQSYFTGIRSLNIGYSMTFLVVLWVLCYALAF
                     VLLRVRRGRLA"
     gene            complement(2588..>2971)
                     /locus_tag="VE844_08335"
     CDS             complement(2588..>2971)
                     /locus_tag="VE844_08335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HZC01355.1"
                     /translation="NIWLWSLGMSSASKNNVAAWLFLQWATTKEVLEQSINAGNINPT
                     RQSLANSQTMKNYTKDWGDYNQTWQTILAKYAKWRFTASPKFPEFGDRWALAIQEVAL
                     GKSSAKEALDAAAQDMQSILDSAKA"
BASE COUNT          642 a          896 c          886 g          547 t
ORIGIN      
        1 cctttgctcc cgctgtcatc gctcctcgcg ccgattcgat caggtcgttc tccgaatcga
       61 tctttggtcc tccgagcacg agcacaggtg ccggacagcc ctccacgacg gaggccatgg
      121 tctcgggatc gcccgtatac tctgtcttta tggcgtcggc tccgagctct gcggccatgc
      181 ggcaaccgaa cgcgaggagg tctggatcac gccggtcgtt gatccgggag ccccacggta
      241 cggtttccac tatgagcggc agtcccgcac gatgggcctc acgcgcagct agtgtgacgg
      301 cacgtgcatt gtcggcgaac atccctcccc gctcgacacc gaagaccagg aacatagcca
      361 cggcctctgc accgagattc acggcgtctt gcggggagca cagcatgcgg tgttgctccc
      421 ccagatactt gaggcgctcg tctaatagga gaaagtcaat gcgcaggata ggctccgggg
      481 caccccggaa ggcgaataga tgcccggcgc gggagagcag gcctggggag acgaagatgc
      541 cgtcggggtt gtaggaaata atactgtcta ccgtcccgac ggcatcttcg gcccccggcg
      601 gcacgccgat tgcgagccca tgatcgatgg ctacgataaa cgtacgaccg ctctctctat
      661 tgaacaggcg gcctaacctt agctctgctc cgttcacaac atcctgcctt tctctatcgt
      721 ctttcctgcg accacccctt gcataaagcg caccctcctc tccccaaagc cctagacttc
      781 ggtcgccgga tcttccgatg ttatcccggc acgtccgtgg tcggcacgaa cctcatccct
      841 tcactgtcct tatcccttga ccgttccggc ggtgaggccc cgaatcatgt agcgcagggc
      901 gaacaccgcg atgatgaact ctgggatgat ggccagcatc actccagcgg ccatcgcacc
      961 ccactggatc tgctcgaagg agatgaactg caaaaggccg cccgttatga cctgggtcct
     1021 ctgcgaggcc aacaccagag cgaagacgaa gtggttccag gcgtagatga acgacaagac
     1081 gcagctggcc gccagacccg gcagggctat ccgggtgatt atcatgcgaa agctggtgaa
     1141 ccagctgccc ccgtctatct ggaccgcctc ctccagttcc tttggcacgt cttcgaggaa
     1201 ggagcgcatc atccacacca tcagcgggaa cgtgatcagt tggtagacca ggatcagccc
     1261 gatgtaagtg tcgtagagcc cgaaggactg gtagatcacg aacaagggca gcagtatgat
     1321 cagctccggc gcgaacctca aagagagaaa agagaacgct aggtcttctt tgccccgaaa
     1381 ctccatcctc gccagggcgt aggccgcggg cagcgctatt agcgccgaga gcagcaggga
     1441 acctgaggtg actatcacgg agttcttgaa cggcgtcaaa aagtccgggc gcgagagcac
     1501 ctccgcgtag ttctgaaagg tcggcgtgaa gaagaacttg ggcggcgtgg cgatgacgtc
     1561 tctttgggtc ttgagggaca acagaaagat ccagaacagc gggaacaaag cgaagagcgt
     1621 gtaggccagc agtgccacaa acgccaagac gtcgtttcta cgccgggcgc ggctggcttt
     1681 ggagctaccc ttaccgaaca ctttaggcca acctccctct acggacccgc agcaagacga
     1741 acgcgagcgc gtagcacagc acccacagca ccaccaagaa ggtcatggag tatccgatgt
     1801 tcagcgagcg gatgcccgta aagtaagact gcacgtgcag gttcatggtc gcgttgatcg
     1861 ggcctcccct ggtggcagtg tagatgatgt caaacatctt gagtgagtct atgcccctga
     1921 aaacgatgac gataataaaa aagggcctga gaagcggcac caccaggttc catatctccc
     1981 tgaggtagct ggccccgtcc accctggcgg cctcgtgcac ctctgtgggg atggactgca
     2041 tcccggccaa gaggatcagg atgacgaacg gcgtgtagat ccaggtgtct atgagtacca
     2101 ccgagaacag cgccgtgctc gtagatccca gccagtcaaa ggctggcaga tagacccaac
     2161 tgagcatgta gtttaggacc ccatctggtg tcatcatcac ccgccacatc atggtggcga
     2221 tcaccggcgg cataaggagc ggcagcacga tgagcgcccg aaagaacctg atgtgtaagc
     2281 cctcgcgcat cagcaagagc gccaccccaa agccaaggag tgtctgcacc gccaccgcca
     2341 gcgccgcgta ggcgaaggta acgaggatag cgtgcaggcc ctccccgctc aaagcgaagg
     2401 cctgcaggta gttagtgagg ccggagaaag cggggttctg gcccagcgtg aggtcgaagt
     2461 tcgtgaagct ccagtaaacc ccgctcagga acgggtagag caccgccagt agcagcgcta
     2521 taccgggcag catgagcagg tagggcagcc ggcgagaggt attcatctgc gttacctatg
     2581 tcccgcgcta ggccttggcg gaatcgagga tgctctgcat gtcctgggcc gccgcgtcga
     2641 gggcctcctt ggcagagctc ttgcccagcg caacctcctg gatggccagc gcccaccggt
     2701 ccccaaactc cggaaatttg ggagaggcgg tgaagcgcca cttggcgtac ttggcgagga
     2761 tcgtctgcca ggtctggttg tagtcgcccc agtccttggt gtagttcttc atggtctggg
     2821 agttggccag agactggcgc gtggggttga tgttccccgc gtttatgctc tgttcgagga
     2881 cctccttcgt ggtcgcccac tgcaaaaaga gccaggcggc gacgttgttc ttggaggctg
     2941 aggacatccc cagcgaccac agccagatgt t
//
LOCUS       DASQSL010000813         2369 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_101463, whole genome shotgun sequence.
ACCESSION   DASQSL010000813 DASQSL010000000
VERSION     DASQSL010000813.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2369
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101463"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            347..1816
                     /locus_tag="VE844_08340"
     CDS             347..1816
                     /locus_tag="VE844_08340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009153671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HZC01356.1"
                     /translation="MADTTERRDEFATELPSKYLPAVKYRDLPEARSLRNYMGASVII
                     LATALGSGELILWPYITTQVGISLVWLSVVGITVQFFLNMEVERYTLVTGETAVTGFS
                     RMWVGWSVIFILGAILPNTIPGWAASGAELFTFIFGLGAGAAPIVATIFLVSIALALT
                     LSPVVYQVLEKVQAVLVIIILAFIALAIFIATDLSAWGGVVTQAPQGLANLPTYWEEI
                     GAASLLGALAFAGAGGANNLVQSNYVRDKGMGMGLHIPNIVSPITGEEVAAPSLGYVP
                     PDTEENRRRWKEWWKVANQEHLITFWFIGALLLVSLCVLVFSSIGVQENIGSDLEFVE
                     DWGTAMGERIAPWFAQFFFIAGFVMLLSTNIGIVDWVSRLTADTLKVSFLRESEFWSE
                     SKIYATVVWIMAIGGSILIWTGIEPIVLLVMSAAGGFYVMAAYSTLLNFLNRKYLPEY
                     AKLKGWRSPIAVLVALFYLIPSVILLYLAATQGLSAFGL"
BASE COUNT          472 a          689 c          696 g          512 t
ORIGIN      
        1 gtgtgcttgg atgagcgaca aaacgtccct aactagttag tgatcggcgg gttctgggag
       61 acgaagatat catggacaac cagcgcgagc gaccacggat cggtggtcac cgtcagccgc
      121 atcgtggacg accgcaccgt gggagtcatc gccgccgcca agggagctca tctcctcgcc
      181 tcctttcctt cggcggtgag gagatgtggc ccctcaccgc gctgctaaac acaacgtggt
      241 caggagccat cagagctccc tgcctgcacg gcgatccgga acatggcact attttaggca
      301 cataggggag ttccctgggg taacagactg aaggagggtt atcagtatgg ccgacacaac
      361 agaacgacga gacgaattcg caaccgagct accgagcaag tacttaccgg cggtaaagta
      421 ccgcgatctc ccagaggccc ggagcctgcg taattacatg ggggcgagcg tcattatcct
      481 tgccacagcg ctcggctccg gcgagctgat actgtggccc tatatcacca ctcaggtggg
      541 aatatctctc gtgtggctct ccgtggtcgg cataaccgtg cagttcttct tgaacatgga
      601 ggtcgagcgc tacacgttgg taactggcga gaccgccgta acgggcttta gccgcatgtg
      661 ggtgggctgg tctgtgatct tcatcctcgg ggcgatctta ccgaacacca tcccggggtg
      721 ggctgccagc ggggccgagt tgttcacgtt catcttcggt ctcggcgcgg gcgctgcacc
      781 catcgtcgcc actatattcc tcgtctcaat cgccctggcg ctgaccctct ctccggtggt
      841 ctaccaggta ctcgagaaag tacaggctgt actggtcatt atcattctag cctttatcgc
      901 cctggcgata ttcatcgcca ccgatctgtc ggcctggggg ggcgtcgtta cccaggctcc
      961 ccagggcctc gccaatctcc ccacctactg ggaggagatc ggggccgcct ccctcctggg
     1021 ggcgctagcc ttcgcgggtg ccggcggcgc caacaacctg gtgcagagca actacgttcg
     1081 ggacaagggg atgggcatgg gtctccacat ccccaacatc gtctccccca taaccggcga
     1141 ggaggtggcc gcgccgtcgc tggggtacgt gccgccggac accgaggaga accgtcgtcg
     1201 ctggaaggag tggtggaagg tagcgaacca ggagcacctc ataaccttct ggttcatcgg
     1261 cgcgttgttg ctcgtctccc tttgcgtgct cgtcttctcg agcataggcg tccaggagaa
     1321 catcggttcc gacctggagt tcgtcgagga ttggggcaca gccatgggcg agcgcatagc
     1381 gccgtggttc gcgcagttct tcttcatagc cggcttcgtt atgctcttgt cgaccaacat
     1441 aggtattgtg gactgggtca gcaggctcac agccgacacg ctcaaggtga gcttcctgag
     1501 ggagagcgag ttctggagcg agagcaagat ctacgccacg gtcgtgtgga tcatggccat
     1561 cggtggctcg atacttattt ggactggtat cgagccgatc gtattgctgg tgatgtccgc
     1621 ggcgggaggc ttttacgtca tggcagcgta ctcgacgcta ctgaacttcc tcaaccgtaa
     1681 gtatctgccg gagtacgcca aactcaaggg ctggcgatcg ccgatagcag tcctcgtcgc
     1741 cctgttctac ctcatcccgt cggtgatcct gctctacctg gcggcgaccc aggggctgtc
     1801 ggcatttgga ctctagctct agctgaggta gatcctgcaa acgcttgagg atgcgcagcc
     1861 tgcgtgctaa agggcctctg gctgcgcatt ctcttcgggc ttgcgagctt ctgcgtgctc
     1921 accacgctag cctacctgct cgggttgctc tcgtagacca ttcaccaggg cattgcctaa
     1981 gtactcgcgg cctggtctct tattcaccga acgtcgggga agaagaggac ttctcagaag
     2041 tacacatcca gaatactgat aaatgagatc ggggcagagc ccattacgcc ggttggcccc
     2101 gatcttacaa agagggtctg accacaacat cttgggcggg cgcataagga tgcgctgacg
     2161 tggaaacgtt gtgttgtcta aacacccagt tcctacggta gatgccgcca gatgaatcgc
     2221 agcccaatac agcagttcta cagtagtttc acagtagaca cggttaaccc ctgtgaacag
     2281 aggcgaacgc aaacaggctt agataagcgg atttctaacg cccactaacc ccggtaaact
     2341 tatcgggaca gactcttaat ctctaggtt
//
LOCUS       DASQSL010000814         1331 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_20602, whole genome shotgun sequence.
ACCESSION   DASQSL010000814 DASQSL010000000
VERSION     DASQSL010000814.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1331
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20602"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            155..601
                     /locus_tag="VE844_08345"
     CDS             155..601
                     /locus_tag="VE844_08345"
                     /inference="COORDINATES: protein motif:HMM:NF017416.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01357.1"
                     /translation="MAEVGLVGFAKVALDVARSVLPNYRSKFSKHVFTQPQLLAIVCL
                     MRYEGWTLRKAEVRLAEHGELREALELDKAPDYTTLHRFLNRLDEWVLVRALGETVRR
                     GPSPSSHARHDYQQESRSIGLQWMRLGCLSGCGQHLLRTAHTKPRW"
     gene            606..1073
                     /locus_tag="VE844_08350"
     CDS             606..1073
                     /locus_tag="VE844_08350"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01358.1"
                     /translation="MLWRKWLKWLVLVDTQSQLVLAQEACSGPYNGSAMLRPLADVAY
                     ALNPFGWLLADAEFDSERNHRHVREKIGALSAIPAKRGGASWEVVGGYRAQMRAEFPR
                     KMYRRRALVESVFSAVKRKLSTRAPGRSLESQRIQALLLGVAYNLYRLKPCSV"
BASE COUNT          272 a          372 c          397 g          290 t
ORIGIN      
        1 gtttggtggt atgcaaggcg gcgaaatggc gtttctggct ccgttctgag caccttgaga
       61 gcccagagtg aggcttatct ggaattttca gacagtttgg ctctgttgac atcgtcatac
      121 gaaaggcgca tcctggcaat caggggtgag gcgtatggcc gaggttgggc tcgttggttt
      181 cgctaaagta gcgctggatg ttgctcgctc cgtcttaccc aactaccgta gcaagttctc
      241 caagcatgtc ttcactcagc cgcagctact cgctatcgtc tgcctgatgc gctacgaggg
      301 atggactttg cgtaaggccg aagtccgtct ggcggagcat ggggaattgc gagaggctct
      361 ggagttagac aaagcccccg attacaccac actccatcgc ttcctcaatc ggctcgacga
      421 gtgggtgttg gttcgtgctc tgggtgagac cgtaaggcgt ggtccgtctc catcaagcca
      481 cgctcgccac gactaccagc aagaatcgcg atcgatcggg ttgcagtgga tgcgactggg
      541 ttgtctctcc gggtgcggtc agcaccttct acgtacagcg cacacaaaac cgcggtggta
      601 agcccatgct ctggcgcaag tggctgaagt ggcttgtcct agtcgatact caaagccagc
      661 tcgtactggc ccaagaggcc tgctccggtc cctacaacgg ctcggcgatg ctgcgtccac
      721 tggcggatgt tgcctacgca ctcaacccgt tcggttggtt gttggccgat gcagagttcg
      781 acagcgagcg caatcatcgc catgtgcgcg agaagatagg agcgctgagc gcgatcccag
      841 ccaagcgcgg cggagcgagc tgggaagtag taggaggcta ccgagcccag atgcgcgccg
      901 agttcccacg caagatgtat cgacgcagag cgctggtaga gagcgtcttt tcggcagtga
      961 agcgtaagct ctcgacgaga gcccctggaa gaagcctcga aagccagcgg atacaggcac
     1021 tgctgttggg agtggcttac aacctttacc ggctcaagcc gtgctcggtt tgagggttgt
     1081 aaatcgagct ttatagaagg atgtcaacag agccaagcta tctcataaat ggtctaacac
     1141 ccgtagccct cgctgggttt ctctaccgcg cttctcgcgc aacccagcgc cggctcatct
     1201 cgctttccag cacctcctcc ggtgtcggat cgaaagttag cccgtaacgg tcgaaaatca
     1261 ccgctcgtag cctgcgaaac aaggccatct cggcttgtag tgcttcgtac agcgcctggg
     1321 gttgcacagc a
//
LOCUS       DASQSL010000815         1419 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_86849, whole genome shotgun sequence.
ACCESSION   DASQSL010000815 DASQSL010000000
VERSION     DASQSL010000815.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1419)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1419)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1419
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86849"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            395..1078
                     /locus_tag="VE844_08355"
     CDS             395..1078
                     /locus_tag="VE844_08355"
                     /inference="COORDINATES: protein motif:HMM:NF018095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0070064 - proline-rich region binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HZC01359.1"
                     /translation="MKPKTALRGIALFSGCWVIVTLSGCSGPQVQQTESDGKRVFSSQ
                     PSDIGAKQLDPLLVRVSRLQVATLEALDAARMVGTAESQLTEALQYLASAEHLLQAGR
                     TSYTGKQYQESLEQLRAADTAFRQAEEAAVRAGLEQLERELVADYGRLLPSQNRNRHP
                     ASGAVRVSQWTINLRDGAGLSFPVVGKAQRGDTLTLVAESGEWYRVQTAAGVLGWVSK
                     SLVTRLPEP"
BASE COUNT          320 a          382 c          408 g          309 t
ORIGIN      
        1 gacctgcact aacacacgag cgacggtccc agccattggt gaagcaatga cgtgcatgca
       61 ccgcatcctt gtggcccccg gagcttcctc ctcgtggcga tgaggagggg tcctggcggc
      121 accccacgta tcgcctgggg atttacgtac gtgccaaaga ttccctgatc ccgctctgac
      181 gaattctcgt ccccggttga caggcctact cgctttgggt aataaggagt actgttgccg
      241 gggaggtaag atccgaaagg tgcacgggaa gcgccatcac cagactgccg gtattaagtg
      301 gctcaattat agtggtcccc ttcctacaat gcaagtgtat ggctagccga aagtgttgcc
      361 ttcaaggcac aaggcgagag aggccaagac ctgaatgaaa cctaaaaccg cactccgagg
      421 aatcgcactc ttcagcggct gttgggttat agtgacgctt agcgggtgca gcggtccaca
      481 ggtgcagcag accgagtcgg atgggaaacg cgttttttcg tcccagccgt ccgacatcgg
      541 agcaaagcaa ctcgaccctc tgctcgtcag ggtctctcgg ctgcaagtag cgacgctgga
      601 agcgctggac gcggccagga tggtgggcac tgccgaaagc caattgaccg aggcgctaca
      661 gtatttggcg tcggctgagc acctcctgca ggctggaagg acgtcctata caggcaagca
      721 gtatcaggaa agtttggagc aattgcgcgc cgccgatacg gcctttcgac aggctgagga
      781 ggcggctgtg cgcgctggtc ttgaacaact tgaacgtgag ctggtggccg attatgggcg
      841 cctcctcccc tcacagaatc gaaaccgcca tccagctagc ggcgcagtgc gagtgagtca
      901 atggaccatc aacctgcgcg acggagcagg gctgagcttc ccagtggtag gtaaggcaca
      961 acgtggtgac acgctgaccc ttgttgctga atccggggag tggtaccgtg tgcagacggc
     1021 tgcaggggtg ctcgggtggg tatcgaaatc actcgtgaca cgactccccg aaccataaga
     1081 tggcaaaggc tgatatgatc aatcgagagt tgcccatctt gacacaaagg tggacatgat
     1141 atatatatac ttagatcccc ttattagtct ttgggtcgat tgacttcggt aaaagtctgg
     1201 cttcctcaga cttttcctta gtcggtgcgt gatggtgatt ctatcaaata cccccgccct
     1261 cgagggtaaa aatattgcga tcgattaggt atcgatacat actgctgccg caactcacac
     1321 atgccttaga cctcaatgcg tgctttcccg ccggctacta gctggtcgta tgatcctatg
     1381 ctaaggattc ctcataatgg acccgcatga tgtgcctat
//
LOCUS       DASQSL010000816         2072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_167793, whole genome shotgun sequence.
ACCESSION   DASQSL010000816 DASQSL010000000
VERSION     DASQSL010000816.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2072
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167793"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(119..1852)
                     /locus_tag="VE844_08360"
     CDS             complement(119..1852)
                     /locus_tag="VE844_08360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006458872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4277 domain-containing protein"
                     /protein_id="HZC01360.1"
                     /translation="MIDKIIRLIKVERVDDIPVLLAHLQKMHVPALLDRFFPTHGHWK
                     GELSFGEVVAVWLTFVASQGDHCLSHVQPWVEDHLDTLTAAVGKTIRPLDFSDDRLAL
                     MLDALSEAETWDDFETALNGRVLRVYELERDRIRIDSISAKTYAEVSEEGLFQFGHSK
                     DHRPDLPQVKISLSALDPLGLPLTTTVVSGECADDPLYVPEIKRVQQTLGAGGKTYIG
                     DCKMGALQTRAFIAGSGDYYVCPLAGKQMPAEELEKLLSPVFSGEQRLEKVYHPAAED
                     APEEPRLIAEGYEVGVDLEAEVGGQPVQWQERRLVVRSTAHAARQAVSLDARLTQAVA
                     EIEHLNERKQGKKILDAEELKAAAHQIMERRRVAGLVRVETQTRKRKYGARKAETRLE
                     SRSTMSAQIETQAVKEAKQRLGWRVYATNQGMLALVAVIMAYRGQYLIERCFGRFKGQ
                     ALSLTPLFLQTESRVEGLIRLLSLALRLLILVEFVVRRQLEKAQSKVAGLYPGQATRA
                     TASPTAELILRAFQGISLTVVEIAGQVRALLSPLSKLHQRLLELLGLSADIYVRLVQH
                     FLKPALNLSEP"
BASE COUNT          444 a          629 c          534 g          465 t
ORIGIN      
        1 tcagcggtct gttagcgaag ttggggttga gttaccaaaa agcgcgtttt atcagcgatc
       61 gccaaggcga tccgaactat gataccaatt cgcaatctat gaagtattaa ttataatctc
      121 acggttcgct taaattgaga gccggtttta gaaaatgctg aaccagtcgc acgtatatat
      181 cagcggacaa gccgagcagt tccagcaggc gttgatgcag cttgctcagc ggcgacaaca
      241 gcgctcgcac ctgtccagcg atctccacga cggtcaagct gataccttgg aatgcccgca
      301 atatcaattc cgctgttggg gaggccgtcg cgcgcgtggc ctgacccgga tagaggcctg
      361 cgaccttgct ttgggctttc tccaactgcc gccggacgac gaactccacc aggatcaaca
      421 gtctcaaggc caggctcaac aaccggatca agccctccac ccggctctcg gtttgcaaaa
      481 acagcggcgt cagcgacaag gcctgtcctt tgaagcgccc gaaacagcgt tcaatcaaat
      541 actgcccccg ataagccatg atcacggcca ccagcgccag catcccctga ttagtcgcat
      601 agacgcgcca ccccaggcgc tgcttggctt ctttgacggc ttgagtctcg atctgcgcac
      661 tcatcgtgct ccggctttcg agtctggtct cggccttgcg cgcaccatac ttccgcttcc
      721 gggtctgggt ttcgaccctg accagtccgg cgacgcgacg gcgttccatg atttgatggg
      781 cggctgcttt caactcttcg gcgtcaagga ttttcttgcc ctgtttgcgt tcattaaggt
      841 gttctatctc cgccacagcc tgggtgagcc gggcatcgag actcaccgct tggcgtgcag
      901 cgtgggccgt agagcgtacc accaaccgcc gctcctgcca ctgcaccggt tgaccgccca
      961 cctctgcctc caggtcgacc cccacctcat agccttcagc gatcagccga ggttcttctg
     1021 gcgcgtcctc cgccgccgga tgatagacct tctcaagtct ttgctcgccg ctgaagaccg
     1081 gcgacagcag tttttccagt tcctctgcag gcatctgttt gccggccaag ggacacacgt
     1141 aataatcccc gctcccggcg ataaaggcgc gcgtctgcag cgcccccatc ttacagtcgc
     1201 cgatgtaagt cttgccgcca gctccgagcg tttgctgcac ccgcttgatc tcaggcacat
     1261 acaacgggtc atcggcacac tccccactca caacggtcgt tgtcagtggc aaccccagcg
     1321 gatcgagtgc cgagagacta atcttaactt ggggcaagtc ggggcgatgg tctttgctat
     1381 gaccaaactg aaacaacccc tcctcgctca cctcggcata ggtcttggcc gagatgctat
     1441 cgatccggat ccgatcacgc tccaactcat agacgcgcag caccctacca ttgagtgcgg
     1501 tttcaaaatc gtcccaggtc tctgcctcag agagcgcatc cagcatcaaa gccagccgat
     1561 catcgctgaa gtccagcggg cgaatggtct tccccacagc ggccgtgagc gtgtcgagat
     1621 ggtcttctac ccagggttgg acatgcgaga ggcaatgatc gccctgcgag gcgacgaagg
     1681 tcaaccacac agcgaccacc tcgccaaagc tcaattcgcc cttccagtgg ccgtgggtcg
     1741 gaaagaaccg gtcgagcagg gccggaacgt gcatcttttg caagtgagcc aacaacacag
     1801 gtatgtcgtc gactcgttcg actttaatca gacggataat cttgtcaatc atacgtcaag
     1861 attatccgac attttcaatt ctcagaagcc gcttttgatt taagcgaact ataagtatat
     1921 gtgaaatatt catacccttt gattgtgctt gcagtggctg gcgtggttag agtataagtt
     1981 cttcaggtat acttggagcc atctcggagg gccttcatgg aacaccggct tactatggtt
     2041 tactggaaag gcgagcgatt ttggctcgga aa
//
LOCUS       DASQSL010000817         1527 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_183724, whole genome shotgun sequence.
ACCESSION   DASQSL010000817 DASQSL010000000
VERSION     DASQSL010000817.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183724"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            318..896
                     /gene="lexA"
                     /locus_tag="VE844_08365"
     CDS             318..896
                     /gene="lexA"
                     /locus_tag="VE844_08365"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: protein motif:HMM:TIGR00498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HZC01361.1"
                     /translation="MAAMRLQTYLQQIQTFYRQHHRMPSYREIGAVTGLRSTNAVFKM
                     VNKMIQQGLIAKDARGRLIPKQLLSELRFVGLVEAGFPSPADDELFETMNLEGYLIRK
                     PEATYLLRVQGDSMVDAGILPGDLVLVERGAEPHDGDIVIAQIDGEWTLKYFRRQGNQ
                     VYLQPANGRYQPFYAKEELKIAAVVKAVIRKY"
     gene            909..>1527
                     /locus_tag="VE844_08370"
     CDS             909..>1527
                     /locus_tag="VE844_08370"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011417018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HZC01362.1"
                     /translation="MYLFFGMDDPPLAIRSFPRAIVHIDGDAFFASCEQAKHPTLQGK
                     PVVTGKERGIVASMSYEAKARGVMRGMPLRQIRQICPEAIILPSDYETYSLLSLRMFA
                     IVRRYTPDVEEYSIDECFADLTGLRRPLRMSYREMVVRIKHDLDTELGFTFSVGLAPN
                     KVLAKLASKWRKPSGLTVIPGQAIPQYLAELPLEKVWGIGAQTSAY"
BASE COUNT          324 a          453 c          428 g          322 t
ORIGIN      
        1 ggatgttcag gtaggactcg tagaacgcag gatacgtgta gtacttcccg tcgaacccgg
       61 tgaagtggtc ctccgtccag agttgcttca agacctctag gaactcaaag aagcagactc
      121 ccccggattt agtggtaaaa tttcaaccca ttgatattgt tgacattact ttatagatag
      181 tcttgtgacc acgcgtcgtg tctcaacggg aaatcacggg ctgagcggcc ctcaacatat
      241 gcggtccgtc tgtctaccac taaatccgat ggaatgtgga tttttttgct tgacagtaaa
      301 caagtgttca ctggacaatg gccgccatgc gcttgcagac ctatctccag cagatccaga
      361 cgttctaccg gcagcaccat cgcatgccca gctaccgcga aatcggcgcg gtcacggggc
      421 tgcgctcgac caacgccgtg ttcaaaatgg tgaacaagat gatccagcaa ggactgatcg
      481 cgaaagatgc acgcggccgg ctcattccca aacagctgct cagcgaattg cgcttcgtcg
      541 gcctggtcga agcggggttt ccctccccgg ccgatgacga actcttcgag accatgaacc
      601 tcgagggcta tctcatccgc aagcctgaag cgacctatct cctgcgcgtc cagggcgatt
      661 cgatggtgga tgccggcatc ctgcccggcg atctggtgct cgtcgagcgc ggggctgagc
      721 cccacgacgg cgatatcgtc atcgcccaga tcgacggcga gtggaccctg aaatattttc
      781 ggcgccaggg caaccaggtc tacctccagc cagccaatgg ccggtatcag ccgttttatg
      841 cgaaagagga gttgaagatt gctgcagtag tcaaagccgt cattcggaaa tactaacgac
      901 gcttcctggt gtatctattc ttcggcatgg acgacccacc gctggccatt cggtccttcc
      961 cccgggccat cgtccacatc gatggcgatg cgttctttgc gtcctgtgaa caggccaaac
     1021 accccaccct ccaaggcaaa cccgtggtga ccgggaaaga acgagggatt gtggcgtcca
     1081 tgagctatga agccaaagcc cgcggcgtga tgcggggcat gccgctgcgc cagatccgcc
     1141 agatctgtcc ggaggcgatc attctgccct cggattatga gacctacagc ttactctccc
     1201 tccgcatgtt cgcgatcgtc cgccgctaca ccccagatgt ggaggagtat agcattgacg
     1261 agtgcttcgc cgatctgacg ggactccgcc ggccgctgcg gatgtcgtat cgcgagatgg
     1321 tggtgcggat caagcatgat ctggacaccg agctcggctt caccttttcg gtgggcctcg
     1381 cgcccaacaa ggttttggcc aagctcgcat ccaagtggcg caaaccttcg gggctgaccg
     1441 tcatcccagg ccaagcgatc cctcagtact tggccgagtt gccccttgag aaggtgtggg
     1501 ggatcggggc acagacgagt gcctatc
//
LOCUS       DASQSL010000818         1043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_20655, whole genome shotgun sequence.
ACCESSION   DASQSL010000818 DASQSL010000000
VERSION     DASQSL010000818.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1043
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20655"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..974
                     /locus_tag="VE844_08375"
     CDS             <1..974
                     /locus_tag="VE844_08375"
                     /inference="COORDINATES: protein motif:HMM:NF014430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01363.1"
                     /translation="LAPSGKKDDPADAQLLLELVSKHQAKLKPWRPADEHTRTLQFFV
                     EHRRKLVQDKTRLTNRLTSVLKGDFPHVLRWFAALDTPLVCDVLKQWPTLEAVQNTDD
                     TALRAFFQAHRAYNSAINQQRMDGIRQAIPATTDQAVIRSSVMVVHALVEQVRGLADA
                     IRRFEQEIAGLTRSHADFQIFASLPGAGPVHASRLISALGTDRGRYECVEDLLTFAGI
                     APIIERSGKTLVTHFRWFCPTCLRQSFHEFAGQSIQYSPWAKAFYRQQRMRGKDHQAA
                     VRSLAFKWTRIIFQMWKRRTPYYERTYMAALQRRGSPLCHVLAEHPA"
BASE COUNT          216 a          312 c          300 g          215 t
ORIGIN      
        1 cgctagcgcc cagcggtaag aaggatgatc ccgccgatgc ccagctgttg ctggaactgg
       61 ttagcaagca tcaggcgaag ctgaagccgt ggcgtccggc cgatgagcac accaggacac
      121 tccaattctt cgttgagcat cgccggaaac tggtccagga caaaacccgc ctgacgaatc
      181 ggctgacgag cgtgctcaaa ggcgatttcc cgcacgtctt acgctggttc gcggccctcg
      241 acacgccgtt agtctgtgat gtcctcaagc aatggcccac cctggaagcg gtccagaaca
      301 ccgatgacac ggcgttgcgg gcgttctttc aggcgcatcg tgcatacaac tccgccatca
      361 accagcagcg gatggacggg atacgtcaag cgattcctgc aaccaccgat caagcggtga
      421 tccgctcctc agtcatggtc gtgcacgcgc tggtcgagca agtacgcggc ttggccgacg
      481 ccatccgtcg gtttgagcaa gagattgcag ggctcacccg ttcacacgcc gattttcaga
      541 tttttgcctc gctgccgggt gcagggcccg tccatgcctc gcgcttgatc agtgcgctgg
      601 gcacagatcg gggtcggtat gaatgcgtcg aagacttact gaccttcgcc ggcattgccc
      661 cgatcatcga acggagtggt aaaacgctcg tgacgcactt ccgctggttt tgccccacat
      721 gtctccgcca atcattccac gagtttgccg ggcagtctat ccaatactcc ccgtgggcga
      781 aggcgttcta tcgacaacaa cgcatgcgcg gcaaggatca ccaggcagcg gtgcgatcgt
      841 tggcgtttaa gtggacgcga atcatcttcc agatgtggaa gaggcggaca ccgtattacg
      901 agcgaaccta tatggccgcg ttacagagac gcggctcgcc actgtgtcat gtgttggctg
      961 aacacccagc ataggcggaa ttctcgcaac aattgctctc ttgtcgttgc cgaaagcagc
     1021 tcagatggct ttactctggt ggg
//
LOCUS       DASQSL010000819         1873 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_167797, whole genome shotgun sequence.
ACCESSION   DASQSL010000819 DASQSL010000000
VERSION     DASQSL010000819.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1873)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1873)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1873
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167797"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..863)
                     /locus_tag="VE844_08380"
     CDS             complement(<1..863)
                     /locus_tag="VE844_08380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010960935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase beta-grasp
                     domain-containing protein"
                     /protein_id="HZC01364.1"
                     /translation="MSAQKVLKMIKDEDIKFVDFRFTDTRGKEQHVTVPAHQVDEDVF
                     ENGKMFDGSSIAGWKGINESDMILMPEPETAVVDPFFDAPTLILRCDVLEPTTGQGYG
                     RCPRSLAKRAEVYLKSIGIADAAYFGPEPEFFIFDDVRWGAQMSGAFYQIDSEESSWN
                     SEKVFENGNIGHRPGIKGGYFPVPPVDSLQDIRSAMCLTLEKMGLVPEVHHHEVATAG
                     QCEIGTRFNTLVRRADDLQILKYVIHNVAHSYGKTATFMPKPLVGDNGNGMHCHQSLA
                     KAGRNLFAGDN"
     gene            complement(963..>1873)
                     /gene="lysA"
                     /locus_tag="VE844_08385"
     CDS             complement(963..>1873)
                     /gene="lysA"
                     /locus_tag="VE844_08385"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020331922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008836 - diaminopimelate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HZC01365.1"
                     /translation="LETRIRCFNIESAAELERLNQVAAKMGLSAPVSIRVNPDVDAKT
                     HPYISTGLNQNKFGIAMHDALDIYIQAARMEHIEIRGVSCHIGSQLTSMEPLLNALDR
                     LLGLVDTLERKDIGIEHLDIGGGLGIRYRDETPPSPSAYAQAIMARLQDRPYEIIVEP
                     GRAIVGNSGVLLTRIEYLKHTGRREFAIVDAAMNDLLRPALYNSWQDIVPVEPRLAGK
                     PRVYEVVGPICESGDFLGRERMLCVEAGDLLAIRSVGAYGFSMSSTYNSRPRAAEVMI
                     VGDQAYLIRERDSVHDLMAGEAILPY"
BASE COUNT          422 a          530 c          487 g          434 t
ORIGIN      
        1 taattatcgc ctgcaaatag attcctgccc gctttagcca gcgactgatg gcaatgcata
       61 ccgttgccat tatcgcctac caggggcttg ggcatgaagg tcgcggtctt accatagcta
      121 tgggcgacat tgtggatcac gtatttcagg atctgcagat catcggcgcg ccgcaccagg
      181 gtattgaacc gggtgccgat ctcacattgg cctgccgtgg ccacttcatg gtgatggacc
      241 tcggggacta agcccatttt ttccagcgta agacacatcg ccgaacggat gtcctgtagc
      301 gagtctaccg gcggtaccgg gaaataaccg cctttgatac ccggacggtg gccgatattg
      361 ccgttttcaa ataccttctc ggaattccag gaagactcct cggaatcgat ctgatagaag
      421 gcacctgaca tctgagcccc ccagcgcaca tcatcgaata tgaagaattc tggctcggga
      481 ccaaaataag ccgcatctgc gattccgatg gatttgaggt agacctccgc ccgcttggca
      541 agagaccgcg ggcagcgtcc atagccttgg ccggtggtgg gctctagcac atcacagcgc
      601 agaatcaggg taggtgcgtc aaagaaagga tccacgaccg ccgtctccgg ttcgggcatc
      661 aggatcatgt cggattcatt aatccccttc cagcccgcga tcgaggatcc atcaaacatc
      721 ttaccgttct caaatacgtc ctcgtcgact tgatgggcgg gtaccgtgac gtgttgctct
      781 tttccccggg tatcggtgaa acggaaatcg acgaatttga tatcttcgtc ctttatcatt
      841 tttaagacct tttgtgcaga cattagccac tccttcaggg ccagtaaaaa atggattggt
      901 tagatttaga gaataatgtt ttaaaagccc tagctttaag caatatatat gcccttgcaa
      961 actcaataag gcagtatcgc ctcacctgcc atgagatcat ggactgaatc gcgttcccgt
     1021 atgagatacg cctgatcccc tacgatcatg acctctgccg cccgcggcct cgagttgtag
     1081 gtcgagctca tgctaaatcc ataagccccg accgagcgta tggccaacag atcgccggct
     1141 tcaacgcaga gcatccgctc cctccctaaa aaatcccccg actcgcagat agggccgacc
     1201 acctcgtata ccctcggctt accggctagg cgcggctcta ccgggacgat gtcctgccag
     1261 gaattgtaaa gcgcggggcg caagagatca ttcatggccg catccacaat ggcgaattcc
     1321 cgccttccag tatgtttcag atattcgatc cgggtcagca agacaccgct attaccgact
     1381 attgcacgtc cgggctctac aatgatctca taaggacggt cttgaagtcg ggccatgatg
     1441 gcttgagcat aggcgctggg acttggcggg gtctcatctc gatagcggat cccaagccct
     1501 ccgccaatat cgaggtgctc tatcccgatg tctttacgtt cgagcgtatc taccagcccc
     1561 aagagccgat ccagggcatt gagcaggggt tccattgagg tgagctgcga accgatatgg
     1621 cagctcaccc cccggatctc gatatgctcc atcctcgctg cctggatata gatatctagg
     1681 gcatcgtgca tggcgatccc gaacttgttt tggttcagac cggtggagat gtaagggtgg
     1741 gttttggcat ccacatcggg attgacccgg atcgagacgg gcgcagagag tcccatcttg
     1801 gccgccacct ggttcaggcg ttcaagctcc gctgccgact cgatattgaa gcagcggatc
     1861 ctggtctcaa gcg
//
LOCUS       DASQSL010000820         3630 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_86906, whole genome shotgun sequence.
ACCESSION   DASQSL010000820 DASQSL010000000
VERSION     DASQSL010000820.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3630
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86906"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1087)
                     /locus_tag="VE844_08390"
     CDS             complement(<1..1087)
                     /locus_tag="VE844_08390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010942693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HZC01366.1"
                     /translation="MLSWLLPKIIPSKNERELRRIRPLVERINQLEGEVSGLSDAELR
                     AKTGAFRQRSEQGATPDELLPEAFAVVREASKRVLQMRHFDVQLIGGIVLHEGKIAEM
                     ATGEGKTLVATLPAYLNALTGRGVHVVTVNDYLARRDTEWMGPLYRQLGLTVGTIQHD
                     MDDSARKQAYQADIVYGTNNEFGFDYLRDHMKFSLDDCVQRELHYAIVDEVDSILIDE
                     ARTPLIISGPAEQSTDLYYRIDRIIPRLKKEDDYTIDEKTRSVVLTEEGVQHVEDLLR
                     VENLYDPRNIEILHHVTQALRAHTLFKKDVDYVVKDGEVIIVDEFTGRLMPGRRWSDG
                     LHQAVEAKEKVKVANENQTLATITFQNY"
     gene            1884..2834
                     /gene="glpX"
                     /locus_tag="VE844_08395"
     CDS             1884..2834
                     /gene="glpX"
                     /locus_tag="VE844_08395"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002639451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HZC01367.1"
                     /translation="MWAQNVDLEFVRVTEATALASSRLMGRGDEAAAQKAAVTTMHDL
                     LQRGALRCCIVVGEGEAGQVTCLANGEILGGGDEPAVDVALDALEGTNICASGRPNSI
                     SVIAVTEPGGFLRTPDVYMEKIAVGPKAKGAIDLSLSPTENLQRIAAALQCYVEDLTV
                     VVLDRPRHERLVKEIREAGAKLRLIGDGDLSAAIAAAVKDSGIEVLMGTGGAPQGLLA
                     AAALKGMNGDMQARFLVRTEAERLKVQRLGLPDVHHILSIQDLVPGRDVLFVATGITD
                     GDVLKGVRLSGKGATTHSLAIRHHSGTIRFIQTEHCFLPA"
     gene            2958..>3630
                     /locus_tag="VE844_08400"
     CDS             2958..>3630
                     /locus_tag="VE844_08400"
                     /inference="COORDINATES: protein motif:HMM:NF013112.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HZC01368.1"
                     /translation="MDQKRAAVITYGCQMNKYESERIAGILVGLGYEITEDARRTDLI
                     LFNTCSIRDKAEQKVYSQLGHLKWLKRDNPELIIGVCGCVAQQEGDRILQRIPHVDLV
                     FGPQNIPKLPSLLEQVRTRRQQLSDLADNPLWDEQLFPIHRGSPSQAWVTVMQGCDKF
                     CTFCVVPYTRGREQSRPTAAVVHEVQTLAEQGYQEVTLLGQNIDSYGKRSPEGKDLAD
                     LLALLQ"
BASE COUNT          721 a         1055 c         1088 g          766 t
ORIGIN      
        1 agtagttctg gaatgtgatg gtagccaaag tctgattttc attggcgact ttgacttttt
       61 ctttggcctc aaccgcttga tgcagcccat cactccagcg tcgtccaggc atgagacgac
      121 ccgtgaactc atcgacgatg atgacctcac cgtccttgac cacgtaatcg acgtctttct
      181 tgaatagggt atgcgcccgc agggcctggg tgacatggtg gaggatctcg atattgcgcg
      241 ggtcgtagag gttctccaca cgcaacagat cctcgacgtg ctggactccc tcttcggtca
      301 agaccaccga gcgcgttttt tcatcgatgg tataatcatc ctcctttttg agccgtggga
      361 tgatacgatc gatgcggtaa tataaatccg tcgattgctc ggcaggtccc gagataatca
      421 gtggcgtgcg ggcttcgtcg atgaggatgc tgtccacttc atccacgatg gcataatgca
      481 gctcccgctg cacgcagtca tcgagggaaa acttcatgtg atcgcggaga tagtcgaaac
      541 cgaattcgtt gttggtgcca tagacgatgt ccgcctgata ggcctgctta cgtgcgctat
      601 catccatgtc gtgctgaatc gtcccgacgg tcaaaccaag ctgtcggtac agggggccca
      661 tccattccgt atcgcgtcgg gcgagataat cattgacggt cacgacgtgg acaccgcgtc
      721 cggtgagggc atttaaatag gcgggcaggg tggcgaccag ggtcttgcct tcgccggtgg
      781 ccatctcggc gattttcccc tcgtgcagga cgatgccacc gatgagctga acatcgaaat
      841 ggcgcatctg caatacgcgc ttcgaagctt cccgtaccac cgcaaacgct tccggaagca
      901 gctcgtcggg cgtcgcccct tgttcggaac gctggcgaaa tgcgcccgtc ttcgcgcgca
      961 gctcggcgtc ggaaagcccc gagacctccc cctcgagctg gttgatgcgc tcgaccagcg
     1021 ggcggattcg ccgtaactcg cgttcatttt tgctggggat gattttcgga agaagccagc
     1081 ttagcatcac gtgcatgcct tccttcgtca tatggtgttc tggaggctgc tgctcaccgc
     1141 agaggtgtcc actctgccac agcagtcatg agccgcgggc acaccgccgc acactgcgac
     1201 taagggtatg cccagctttg catcgatcga aggtaagtct agagaatacg ctgcatgtgt
     1261 cagccatcga tttaacctta acccgcggcg acatgcggcg agaccccagc cctaagcggg
     1321 agccgctttc cggcacctgg tgtgctttag acgccaggaa cgctagtggt gaacgctgca
     1381 tgctcatctg cacagatgaa gggactggag gggcaaccca tgtccgagaa atgcacaggc
     1441 tctggagggg acccgttatg gttctgaagt cattggtgca gcccagcgtt tcatgcagac
     1501 acgggcgggg cctcacgaaa caatgatgcc atggccccga gcttctgtcc ggaccggaag
     1561 cctcctcacc cttggccgga ccaaacagct caggtagccc caggctaaca tggcttcata
     1621 ggtctgtcaa gcgctttgtc gcaccgcgcc tgcggtttcc cgcgccgcca ggtggctggg
     1681 ggcattccga acccggaggc ctggcggcgc ccatcgccgc gaccggcgat ctccgccggg
     1741 attcattcct tgaatcttcc ccatgcttga tctaagatgg gcatctgttg aactgcgttg
     1801 aggtcccaac ccggaggtgt atgccacgca gtcgcaggcg agtcgctagc tggcgatcag
     1861 tccctcatga aggagtgtgc caaatgtggg cccaaaacgt ggatctcgaa ttcgtccggg
     1921 tgaccgaggc gacagctctg gcctcgtccc gcctcatggg gcgtggggat gaagcggccg
     1981 cacaaaaggc cgcggtcaca accatgcatg atctcctcca acgtggcgcg ttgcgttgtt
     2041 gcatcgtcgt cggggagggg gaagctgggc aggtcacctg tctggcgaat ggagaaattc
     2101 tcggcggtgg ggacgagccc gctgtcgatg tcgcacttga tgccctcgaa ggcacgaata
     2161 tctgcgcctc cggccggccg aactcgatct ctgtgatagc ggtaacggag cctggaggtt
     2221 ttctgcggac ccctgatgtc tatatggaga aaatcgccgt cgggccaaaa gccaaagggg
     2281 ccattgacct gagcctgtcg cccactgaga acctccaacg tatcgcggcc gcgctgcagt
     2341 gctatgtgga agaccttaca gttgtggtac tcgaccgccc gcggcacgag cggctcgtga
     2401 aggagatccg cgaggcaggt gccaagctgc gcttgatcgg cgatggcgac ctttcggccg
     2461 ctatcgcggc ggccgtgaaa gattccggca tcgaagtgct catggggacc ggtggtgcac
     2521 cccaggggct gctggccgct gcggccttga aaggcatgaa tggcgatatg caagcccgct
     2581 ttctggtgcg caccgaagcc gagcgcttga aagtgcagcg gcttgggctg cccgatgtgc
     2641 accacattct gagcatccag gacttagtgc ctggccgcga tgtcctgttt gtggcgacgg
     2701 ggatcacgga cggtgatgtc ctcaaaggcg tgcgcctatc agggaagggg gcgacgaccc
     2761 attccctggc gatccggcat cacagtggaa ccatacggtt tatccagacg gaacactgtt
     2821 ttctcccggc ttgacgcggc gcggtcatcg cgcggcttcc cttgacaacc cccaggggtc
     2881 tcgctatatt taagcgctgt aaatgccgcg actattgcgg attttctcga tgtcgagcgg
     2941 ttaataacag gctggctatg gaccaaaaac gggcggcggt catcacctat ggctgccaga
     3001 tgaacaagta cgaatcggaa cgcatcgcgg gcatcctggt cggtctcggc tatgagatca
     3061 ccgaggacgc gcgtcggact gatttaatct tgttcaatac ttgtagcatc cgtgacaagg
     3121 ccgagcagaa ggtctacagc caactagggc atctcaagtg gctcaaacgc gacaaccccg
     3181 aactcattat cggggtgtgt ggctgcgtgg ctcaacaaga gggggatcgc atcctccaac
     3241 gtatcccgca cgtcgacctc gtcttcggtc cccagaatat cccgaaactg ccgtccctct
     3301 tggaacaggt gcggacgcgt cgacagcagc tcagtgatct cgcagacaat ccgctctggg
     3361 atgaacaact gtttccgatc catcgcggca gcccatccca ggcttgggtg accgtgatgc
     3421 agggctgtga taagttttgc acgttctgcg tcgtgcctta tacccggggg cgcgagcaga
     3481 gtcgcccgac tgcggccgtc gtacacgagg tgcaaacgct cgccgagcaa ggttatcaag
     3541 aggtgacgct gctcgggcag aatatcgatt cctatggcaa acgctctccc gaggggaaag
     3601 atctcgccga tcttctcgcc ttgctgcagc
//
LOCUS       DASQSL010000821         1614 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_74916, whole genome shotgun sequence.
ACCESSION   DASQSL010000821 DASQSL010000000
VERSION     DASQSL010000821.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74916"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..290
                     /locus_tag="VE844_08405"
     CDS             <1..290
                     /locus_tag="VE844_08405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01369.1"
                     /translation="RRLFPKKSVTIGTAPHCDYQLDPRETGVELEAEIYVPAWWDRSG
                     ALYIRSRRTPSRVYVNGAEVAGKQGVILMDGEALEKPIRMRFGNYEMTFDA"
     gene            complement(534..1475)
                     /locus_tag="VE844_08410"
     CDS             complement(534..1475)
                     /locus_tag="VE844_08410"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01370.1"
                     /translation="MPEVIWLYLTALLYYRTSASCVALAEALETVSHDRLTRMLQADW
                     SGQTLLERACRMLFVWERGYLILDDTVIPKPFATAMEGLAWVFSSQERRPVLGFSLVL
                     LVWTNGVLRIPLGIRLWHKGGPSKYELALDLLSYARNRLRCRPEYVVFDAWYPSKTLL
                     KRIRDYGWYFVCRLKKNRRFNGHPLRAYRRHPYWVERGWLTGELRVLVVRYGAKYYAT
                     NRLTLPADEVRRVYHVRAQIEEVIRVCKDQLGLSGCQARSERAQRHHITCCLLAFCVM
                     ERERHTRGLSIYKLKRQLSFKGRSLVLPALEQLRSAA"
BASE COUNT          348 a          471 c          489 g          306 t
ORIGIN      
        1 ggcggcgtct gttcccgaag aaaagcgtca ctatcggtac ggcgccacat tgtgattacc
       61 aactggatcc ccgcgagacc ggggttgaac tcgaagcgga gatctacgtc ccggcgtggt
      121 gggatcgctc cggtgcgcta tacatccgaa gtcgtaggac cccgagccgt gtttacgtga
      181 atggggccga ggttgccggg aaacaggggg tcatcctcat ggacggagaa gcgctagaga
      241 aacctatccg catgcgattc gggaactatg agatgacttt tgacgcataa acgggcatcg
      301 aggcaccgag gcacccaggc atcgggtaag acgggagtga ggcgtgaggg tggagtgatg
      361 cgtcggggac attctcaggc ctcagcactc atcactcagc actcgtaact gtgttaaaag
      421 ggggagacga tgaagagacc taccagttcg atcgcggagc ttcgacccac cttggtcatc
      481 ggcgtcggcg gcaccggcta cttgggtgtg acctcggtca aggagaacag atattacgca
      541 gcgcttctca gctgctccag tgctgggagc accagagatc gacctttgaa actgagctgt
      601 cgcttgagct tgtagatgct gaggccccgg gtatgtcgtt cgcgctccat gacacaaaag
      661 gcgagcaggc agcaggtgat gtgatgccgc tgagcccgct ccgagcgcgc ttgacagccg
      721 ctcaggccga gctgatcctt acagacccgg atcacttctt caatttgtgc acggacgtga
      781 tacacccggc gcacctcgtc agccggtagg gtcaggcgat tggtcgcata gtacttggcg
      841 ccgtatctga cgaccaagac gcgcagttca cctgtcaacc agccacgctc cacccaatag
      901 gggtggcgcc gataggcgcg gagtgggtgg ccgttgaacc ggcgattttt cttgaggcga
      961 cagacaaaat accacccata atcccgaatg cgcttcagca gagtcttcga cggataccac
     1021 gcgtcgaaga ccacgtattc agggcgacag cgcaggcggt tacgagcata gctcagcagg
     1081 tccagagcca actcgtactt ggaaggtccc cctttgtgcc acaggcgaat ccccagcggg
     1141 atccgcagga cgccattggt ccacaccaac aggacgagcg agaagcccaa caccggccgg
     1201 cgctcctgac tcgagaacac ccacgccagg ccctccatgg cggtcgcaaa gggcttcggg
     1261 atgaccgtat catcgaggat caagtagccc cgttcccaga cgaacagcat gcgacaggcg
     1321 cgttccagga gtgtttgccc ggaccagtcg gcttgcagca tcctcgtcaa gcggtcatgc
     1381 gacacggttt ccagcgcttc ggccaatgcc acacagctgg ccgaggtgcg atagtagagc
     1441 agggcggtga ggtagagcca aatgacctct ggcatagaga tccctccttc gtcacggttg
     1501 gatgggttct ctattctatc tcatcgcctc tgcgtaacct ctgtgttgtc tcccctcccc
     1561 gtggctcccg tcaacgagac ggacatgctg ttgctaccgg atggtctgaa ggcc
//
LOCUS       DASQSL010000822         1663 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_6736, whole genome shotgun sequence.
ACCESSION   DASQSL010000822 DASQSL010000000
VERSION     DASQSL010000822.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1663
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6736"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(316..1068)
                     /locus_tag="VE844_08415"
     CDS             complement(316..1068)
                     /locus_tag="VE844_08415"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HZC01371.1"
                     /translation="MKIMTLNLNFYESKHGEWSVRRELIVATIEKHAPDIVALQAVRR
                     DPAIEDGKDQAVQLADRLPDFNHVAFVAAAKHPDGRQDGSAFLSRVALDQVDHKVLSL
                     AVNSHAPVQDHAPRIILRARLTSPALTIFNSHYSWVTSQALSNVKEALAYMGRFSGPA
                     LLVGDLNTPPNGEPMRQLAAAGWSDVWAHLRRNNDLGYTFESNAPDKRIDYVWASRDV
                     LPSIKSIELVTEPANPAAARLSDHLGLLVTVL"
     gene            1188..>1663
                     /locus_tag="VE844_08420"
     CDS             1188..>1663
                     /locus_tag="VE844_08420"
                     /inference="COORDINATES: protein motif:HMM:NF015078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01372.1"
                     /translation="MTDETARQTQTLAHTVAPGEVRRLMVFLGLVYFSQGLGQAVGLI
                     NQPLAYYLKSLGMTADRVAQLMAVLTIPWMIKPVYGLISEYVPLFGYRRKSYLILMNG
                     LATGGFLWLTVLTNPDVIVKAILLTAVGVASSDILVDALMVENGHKTGMIRQFQGQ"
BASE COUNT          339 a          479 c          458 g          387 t
ORIGIN      
        1 gggcttccaa gtcataagtc caccattgta aagcaactta tgtcaaacgg aatagttact
       61 tttaatacta gggcgtgttt gcaaactcac catggacccg cgccactcct cgatccggct
      121 ctttcggaaa gccgcgtcag agctactttg caaacacgcc ctagtcctag gactcgcctg
      181 cttgacatcc tacaggttca gcagtacttt cccttctgag gaaaaagcgc atttaaaatt
      241 cctatactct ctccggcttg gctacccaag catggaaagt gtatccggca cggctcatcg
      301 ccggtggtcg ggttgctata ggacggtgac cagaagacca aggtgatccg acagacgcgc
      361 cgctgcgggg ttcgcaggct ccgtaactaa ctcaatgctc ttaatggacg gcaggacatc
      421 ccggcttgcc cagacatagt caatgcgctt gtccggcgcg ttcgattcga acgtgtagcc
      481 gaggtcgttg ttcctccgca ggtgcgccca cacatcactc cagcctgcgg ccgccagttg
      541 ccgcatcggt tcaccattcg gcggcgtgtt gaggtcgccg accagaagcg ccgggcccga
      601 aaagcgtccc atataggcca gcgcttcttt gacgttcgat agggcttgtg aagtgaccca
      661 cgaatagtgg ctgttgaaga tcgtcagcgc aggggatgtg aggcgagcgc gcaggatgat
      721 acgcggcgca tggtcctgca cgggcgcgtg actgttcact gcaaggctga gcaccttgtg
      781 gtccacttgg tcaagcgcga cacgcgagag gaacgccgat ccatcctgcc ttccatcggg
      841 atgcttggct gcagcgacaa aggctacatg gttaaagtcc ggcagtcggt cggcaagctg
      901 aacggcctgg tcttttccgt cttcgatggc gggatcgcgt cgcaccgcct gcaaggcgac
      961 aatatcaggc gcatgtttct ctatcgtggc gacaatcagt tcccggcgca cactccactc
     1021 cccgtgcttg ctttcataaa aattaaggtt cagcgtcatg attttcatgc gtcgttatca
     1081 tccctcacgc gttgttcgct cctgcctcgg cgcttcattt tcgcctaaaa tgatcacgcg
     1141 ctcaatctct ggcggcattc ccaatccaat gttgtgatgc tcttgctatg acggacgaga
     1201 ctgcacgtca aacacagaca ctggcacaca cagtggcgcc tggcgaagtg cgtcggctca
     1261 tggtcttcct cgggctcgtg tacttttcac aagggctagg ccaagccgtc ggtctgatca
     1321 accagccgct ggcgtattac ttgaaatcgc tcggcatgac ggcggaccgt gttgcccagc
     1381 ttatggcggt gctcacgatt ccgtggatga ttaagcccgt gtacggcctt atcagcgaat
     1441 atgttccgct cttcggctat cgacgcaaaa gctatctgat tctcatgaac gggctggcga
     1501 cgggcgggtt tctgtggcta acggtattga ccaatcctga tgtcattgtc aaggccatct
     1561 tgctgacagc cgtcggcgtt gcctcatccg atatccttgt ggatgcgctg atggtggaga
     1621 acgggcacaa gaccggcatg atccggcagt ttcagggcca gca
//
LOCUS       DASQSL010000823         4631 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_143612, whole genome shotgun sequence.
ACCESSION   DASQSL010000823 DASQSL010000000
VERSION     DASQSL010000823.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4631
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143612"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..389)
                     /gene="msrA"
                     /locus_tag="VE844_08425"
     CDS             complement(<1..389)
                     /gene="msrA"
                     /locus_tag="VE844_08425"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013034085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HZC01373.1"
                     /translation="MKLVQGFLYLVANIIGVAALSYSSGAEEISARVEKATFAGGCFW
                     CVEEAFEKVEGVVSATSGYTGGSKANPSYEEVSAGVTGHTESVEIVYDPAKISYERLL
                     EVFWHNIDPTTSDRQFCDKGNQYRSAI"
     gene            complement(386..1828)
                     /gene="hemA"
                     /locus_tag="VE844_08430"
     CDS             complement(386..1828)
                     /gene="hemA"
                     /locus_tag="VE844_08430"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006475120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HZC01374.1"
                     /translation="MVPLILGINHKTAPVAIREQVAFSPNKLAGALAEFVDWVSVKEV
                     VILSTCNRMEIYSCLEDPRFRGASRWLAHYHGLSNRDLDPYLFCHRGELAVRHLFQVA
                     CGLDSMILGEPQILGQLKSAYHTAMQVGTLGKRLNKLFQHAFSVAKQVRTDTAIGSSP
                     VSIAFAAVRLAQQIFGDLSEQTALLIGAGDTIELAAQHLHHHGLKRLIVANRSLERAQ
                     FIASRFGGYAIPLKDMPVHLAEADIVFASTASPYPILSKETIAHALKARKHRPIFMVD
                     MAVPRDIEPSSADLADVYLYTVDDLHTVIEENLESRRLAARQADEIIAIETERFMEWL
                     QSLDAVTTIQALRERASIAREQVLKKGLQQLAKGEDPVQVIESLATSLINKLTHTPSV
                     KLREASAAGRDELLRAAQELFDLGNPTPTPSLPLLKGEGETSISSLPLGKGEGEGGGK
                     GPGDLRAACTIPSLSSKIPSMCKRMIRKGL"
     gene            2115..3824
                     /locus_tag="VE844_08435"
     CDS             2115..3824
                     /locus_tag="VE844_08435"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZC01375.1"
                     /translation="MYRILLLTGIISSVCVACASPSLQPDGGNLRPHIVAQKPKHTRS
                     GLTEDVLYKLVVAEFARQRGDLTLSLDHYLELARTLADPQLAEWATRLALFAKQDDQA
                     EEAVRLWVKRSQNDLEARQILAIILLRKGRLQEALPHLESVLDAPGGNRGDKLRLIAD
                     LLSQERDKLAALSVMEQLVARRRQDPEALFAYGLLAFHAGRVDEAQRTMQKALQLAPT
                     NINLVAGYVSLLHKEGRTQSALDWIEKRVNRQPKAFDLRMLYARFLAETKHFDEARKQ
                     FQILAKQAPKNADVHYGLGISYLQNNQLAKAKQHFTALLSEEQYLNQARYYLGQIAEA
                     GKDYESALRWYSAIDDDNYFDAQLNIALVLARQKKLQEAREHLHSLKAQVPQQELRIA
                     RIEGEILTEAGRYQEAMKIYDQALGDRYDSELLYTRAMLAEKMGRLAILERDLRRILE
                     REPDNVQTLNALGYTLADRTDRHQEAYTLIKRALELSPNDFYILDSMGWVLYRLGRLQ
                     EAVQYLRKAQRIRNDPEVAAHLGEVLWVLGDKAEARKIWSKALKAKPDDKNLLKVIQR
                     FKP"
     gene            3837..4451
                     /gene="lolB"
                     /locus_tag="VE844_08440"
     CDS             3837..4451
                     /gene="lolB"
                     /locus_tag="VE844_08440"
                     /inference="COORDINATES: protein motif:HMM:TIGR00548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008320 - protein transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein insertase outer membrane protein
                     LolB"
                     /protein_id="HZC01376.1"
                     /translation="MMRDSLFPGTWLAVLLAAACAELPSTGPFEDANAQSWEARWAAL
                     ERVRRWSLYGRITIQTEQEGWTAGLRWFQREDSYYLRVMAPFGQGTYELERHPRAVVM
                     RTANNKILTADDPETLMRENLGWSIPVEGLHYWLRGIPDPRSPIATLRLDNKGRMTDM
                     EQAGWRIQVRGYMHTGDLLELPAKLFLYTPRVQVRLAVQRWEIR"
     gene            4452..>4631
                     /locus_tag="VE844_08445"
     CDS             4452..>4631
                     /locus_tag="VE844_08445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005005097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HZC01377.1"
                     /translation="MERQPWPAPAKINLFLHILGRREDGYHELQTVFQFLSLSDLLYF
                     KLRHDGAIHRSSELPG"
BASE COUNT         1040 a         1278 c         1313 g         1000 t
ORIGIN      
        1 aagatggccg aacgatactg gttacctttg tcacagaact ggcgatcgga cgtggtggga
       61 tcgatattgt gccagaatac ctcgagtagt ctctcatagc tgatcttggc gggatcatag
      121 acgatctcga ccgactccgt atggcctgta accccggcgg agacttcttc atagctggga
      181 ttggctttac tgccgcctgt ataaccggag gtcgccgaga ccacgccctc gaccttttcg
      241 aacgcttcct ccacgcacca aaaacagccg ccggcaaacg tcgctttctc gacccgagca
      301 gagatctcct cggcgcccga ggaataggaa agcgccgcca cccctatgat attcgccact
      361 agatatagaa acccttgcac aagcttcata aacccttcct tatcatcctc ttacacatgg
      421 atgggatctt actgcttaag ctcgggatcg tacaagccgc tcgaagatcc cccggccctt
      481 taccccctcc ctcaccctcc cccttgccaa gggggaggga cgagatagag gtctcaccct
      541 ccccctttag aagggggagg gatggggtgg gggtggggtt gcccagatcg aacaactcct
      601 gagccgccct caataactcg tcacggcctg cagcgctcgc ttctcggagt tttacgctgg
      661 gcgtatgggt cagcttatta atgaggcttg tggctaacga ttctatcacc tgtaccggat
      721 cctcgccttt ggccaattgc tgcaaaccct tttttagcac ctgctcacgt gcaatgctag
      781 ccctctctcg cagggcttgg atggtggtga cggcatcgag cgattggagc cattccatga
      841 accgctcggt ctctatagcg atgatctcgt cggcttgacg ggccgccagc cggcgcgact
      901 cgagattttc ctcaatcacc gtgtggagat cgtcgactgt gtacagatag acgtccgcga
      961 gatcggcgga tgaaggctcg atatcacgcg gaaccgccat atctaccata aaaataggcc
     1021 gatgtttacg ggcttttaag gcatgggcta tcgtttcttt gctgagaatg gggtaagggc
     1081 tcgcggtgga ggcaaatacg atatcggcct cggcgagatg gaccggcatg tccttgagcg
     1141 ggatagcata gccgccaaag cgggaggcga tgaactgggc gcgttccaat gaacggttgg
     1201 cgacgatcag gcgtttaaga ccgtggtgat gaagatgctg ggcagcgagc tcgatggtgt
     1261 ctccggcacc gatgagcagg gctgtctgct cgcttaaatc gccaaagatc tgctgcgcca
     1321 gccggaccgc ggcaaaggcg atcgagaccg ggcttgagcc gatcgcggta tcggtgcgca
     1381 cctgcttggc gaccgagaag gcatgttgaa acaatttatt gagccgctta ccgagggtac
     1441 ccacctgcat cgcggtatga taggcagact tcaattgccc aaggatctgc ggttcgccga
     1501 ggatcatcga atccaaccca caggcgactt gaaagagatg ccgtacagcg agctcccccc
     1561 gatggcaaaa tagataggga tccaagtctc tattgctcag tccatgataa tgcgccaacc
     1621 atcggctggc gcctctaaat ctggggtctt ccagacaaga gtatatctcc atgcggttac
     1681 aggtagacag aatcaccact tctttgacgc tcacccaatc gacaaattcg gccaaggctc
     1741 cagccaattt atttggactg aaagccacct gttcgcggat ggccaccggc gctgttttgt
     1801 ggttgatccc taaaatcagg ggtaccatag ccgctaagga ttggatagcc acttcaccaa
     1861 tgagggatca aggcttacag gataccaagg cataccggca gacatgacgg ttactttcaa
     1921 agtggagtat agttaaaata ggtgatggta tccgatgata tcctaagtaa atccaccgag
     1981 aagtgggcat cttcattttg actactttag gcggcgtgcg gtcgatcatc ttgctattcc
     2041 tagcatccag gatttcacca agagatccga tctcccaacg atgttttttc cccaagcgta
     2101 gaggtaaatt taaagtgtat cgcattctcc tgctgacagg cataatctcc tcagtctgtg
     2161 ttgcctgcgc aagtccttcc cttcagcccg acggcggcaa cctccgccct cacatagttg
     2221 cccaaaagcc taagcacacc cgatcgggat tgacagagga tgtgctttat aagcttgtcg
     2281 ttgctgaatt tgccaggcag cgtggtgatc tgaccctgtc gctcgatcac tatttggagc
     2341 tcgcccgcac cctagccgat ccccaacttg cggaatgggc tacccggctt gcgctatttg
     2401 ccaaacagga cgaccaggcc gaggaggctg tacggctctg ggtgaagcgg tcccaaaacg
     2461 atctcgaggc gcggcagatc cttgctatta tactcctgcg taagggtcgg ctccaggagg
     2521 ccctgccgca tctcgaatct gtgctcgatg cgccgggtgg aaacaggggc gataagctgc
     2581 ggctgatcgc ggaccttttg agccaggagc gagacaaact ggcggcgctc agtgtcatgg
     2641 aacagcttgt ggctcgccgc agacaggacc cggaggcgct gttcgcctat ggtcttttgg
     2701 cattccatgc cgggcgggtc gatgaggctc agagaacgat gcagaaggcc ttgcaactcg
     2761 cccctaccaa tatcaacctc gtcgccggct atgtgagcct gctgcataaa gagggacgga
     2821 ctcaatcggc gctcgattgg atcgaaaaac gggtaaaccg gcaacctaaa gcattcgatt
     2881 tacgcatgct ctatgcccga tttctcgcgg aaaccaagca cttcgatgag gcccgcaagc
     2941 aatttcagat cctcgccaag caagccccta agaatgccga tgtccattac gggttgggga
     3001 ttagctatct gcaaaacaac caactggcga aggctaaaca gcatttcacc gccctgttat
     3061 cggaggagca atacctcaat caagcccgtt attatctggg gcagatcgcc gaggccggca
     3121 aagactacga gagcgctctc aggtggtact ccgccatcga cgacgataat tatttcgatg
     3181 cccagttgaa tattgccctg gttctcgcgc ggcaaaaaaa actgcaggag gcgcgcgagc
     3241 acctgcatag cctcaaggca caagtccctc aacaggagct tcgcatcgcc cggatcgagg
     3301 gggagatcct gactgaggcg ggccgttatc aggaggcgat gaagatctat gatcaggcct
     3361 taggtgatcg ctatgattcc gaactgcttt acacgcgggc catgctggcc gagaagatgg
     3421 gtcggctggc tatcctcgag cgggatctac gccgcatatt ggagcgggaa ccggataacg
     3481 tacagacatt gaacgcctta ggttataccc tggcggatcg aaccgatcgt caccaagagg
     3541 cttatacatt gattaagcga gcgctggaat tgagcccgaa cgatttttat atcctcgaca
     3601 gtatgggctg ggtattgtac cggctgggac ggctccagga ggcggtacag tatctgcgca
     3661 aggcgcaacg gatccgcaat gatcccgagg tagccgcgca tctcggcgag gtcttgtggg
     3721 tgctcgggga taaggcggag gcccgcaaga tatggagtaa ggcgctcaag gcaaagccgg
     3781 atgacaagaa tctgttgaag gtcattcagc gctttaagcc ataacatgta tcaaggatga
     3841 tgcgcgattc actgtttcca ggcacctggc tcgccgtgtt gctcgcggca gcctgtgccg
     3901 agctaccctc gaccgggccc tttgaagacg ccaacgccca aagttgggag gcccgctggg
     3961 cagccctcga gcgcgtgcgc cgctggtccc tgtatggacg gatcacgatt caaaccgagc
     4021 aggagggctg gacagcgggt ctgcgttggt ttcagcggga ggacagctat tatttgcgcg
     4081 tgatggcgcc ctttgggcaa ggaacctatg agttggaaag acacccccgg gctgtggtga
     4141 tgcggacagc gaacaataaa attctaacgg ccgatgatcc cgagaccctg atgcgggaga
     4201 atctcggctg gtctatcccg gttgagggcc tgcactactg gctccgcggg atccccgatc
     4261 cccgcagccc gatcgctacg ctgaggctag ataataaggg acgtatgaca gacatggagc
     4321 aggctggctg gcggatccag gtgcggggtt atatgcatac gggcgacctt ctcgagttac
     4381 cggccaagct cttcttatat acgccgcgcg tgcaagtgcg gctggccgtg caacgctggg
     4441 agatacgtta aatggagcgg cagccttggc ctgcacccgc caagatcaat ctatttctgc
     4501 atatcctcgg gcgccgtgag gacggctacc atgagctgca gaccgtgttc cagtttttga
     4561 gtctcagtga tctcctctat ttcaaactgc gtcacgatgg ggcgatccat cgtagctccg
     4621 agcttcccgg c
//
LOCUS       DASQSL010000824         1382 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_31193, whole genome shotgun sequence.
ACCESSION   DASQSL010000824 DASQSL010000000
VERSION     DASQSL010000824.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1382
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31193"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(99..>1382)
                     /locus_tag="VE844_08450"
     CDS             complement(99..>1382)
                     /locus_tag="VE844_08450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013246647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HZC01378.1"
                     /translation="DDSPGGLAFTARQPVLVNAGDLKRFHSEFVKQLMAEGVRSVCCL
                     PLITPSRILGTLNLASLRDGNFTETDAELLSQVASQIAIALENALAYRQIEELKNKLT
                     KEKLYLEEEIRTEYNFEEIIGESTALKRILKQVETVAPTDSTVLILGETGTGKELIAR
                     AIHSLSGRRERTFVKMNCAAIPTGLLESELFGHERGAFTGAIAQKIGRFELAHQGTLF
                     LDEVGDIPLEMQSKLLRVLQEQEFERLGSTRTLRVNVRLVAATNQNLMQMVADKEFRS
                     DLYYRLHVFPIMVPPLRERPEDIPLLVRYFAQHYARRMRRRIETISAETMAALSHYHW
                     PGNIRELENLIERSMILSQGPDLRVPLGELKAQATAAPNGVATLEAAEREHILRALRE
                     AHGVIGGPTGAAAHLGMKRTTLQSRMRKLGISRRT"
BASE COUNT          259 a          417 c          421 g          285 t
ORIGIN      
        1 taaggtttaa actttggcca gagttggtgt tcgctggaga aacgaggcgg tgccgaagcg
       61 gctccgccga aatatcggca gatgccgaga tatcggcgtc aggtgcggcg ggagatcccg
      121 agctttctca ttctggactg gagcgtcgtc cgcttcatac cgaggtgggc agcggccccg
      181 gtgggccccc cgatcacccc atgggcttcc cgcagcgccc gcaggatatg ctcacgctcc
      241 gcggcttcca aggtggccac cccgttggga gccgccgttg cctgcgcttt caattcccca
      301 agcggaacac gcaggtcggg cccttgggac aggatcatgg aacgctcgat cagattttcg
      361 agctcccgga tgttgcctgg ccagtgatag tgggagaggg ccgccatggt ctccgctgat
      421 atcgtctcga tccgcctgcg catgcgccgc gcgtagtgct gtgcgaagta gcggaccagc
      481 aagggaatgt cttcaggacg ctcgcgcagg ggagggacca tgatgggaaa gacatgcaga
      541 cggtagtaga gatcgctgcg gaactccttg tcggcgacca tttgcatgag attctggtta
      601 gtcgccgcca ccaaccggac gttcacgcgg agggtccgcg tgctccccaa ccgctcgaat
      661 tcctgctcct gcaagacacg caggagcttc gattgcatct cgagcgggat gtcgccgacc
      721 tcatccagga acagcgtgcc ttgatgggcc agctcgaagc ggccgatctt ttgagcaatg
      781 gcgccggtga aggcgcctct ctcgtggcca aataattcgc tctcaagcaa ccccgtgggg
      841 atcgccgcgc agttcatctt gacaaaggtc cgctcgcgac gcccgctcaa gctatggatc
      901 gccctggcga tcaactcctt gccggtcccc gtctccccca gaatcaggac ggtggagtcg
      961 gtcggtgcga cggtttccac ctgcttcaga atgcgcttta gcgccgtgct ctccccgatg
     1021 atctcctcga agttgtactc agtgcggatc tcctcttcga ggtagagctt ttccttcgtg
     1081 agcttgtttt tgagctcctc aatctggcga taggccaggg cattctcaag ggcaatggcg
     1141 atctggctgg ctacctgact cagcagttct gcatctgtct ccgtgaagtt gccatcgcgc
     1201 agactggcca ggttcagggt tccgaggata cggctaggcg taatgagcgg gagacaacag
     1261 acggaccgga caccttcagc catcaactgc ttgacgaact cggaatgaaa ccgtttcaga
     1321 tccccggcat tcaccaagac cggttggcgt gccgtaaagg ccaggccgcc gggcgaatcg
     1381 tc
//
LOCUS       DASQSL010000825         1494 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_74942, whole genome shotgun sequence.
ACCESSION   DASQSL010000825 DASQSL010000000
VERSION     DASQSL010000825.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1494
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74942"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(167..331)
                     /locus_tag="VE844_08455"
     CDS             complement(167..331)
                     /locus_tag="VE844_08455"
                     /inference="COORDINATES: protein motif:HMM:NF015947.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HZC01379.1"
                     /translation="MKIVTVSRKGQFTIPKALRERFGLQPGAKVRLWVERGILRVQPV
                     KPRPKRPRMS"
     gene            complement(451..639)
                     /locus_tag="VE844_08460"
     CDS             complement(451..639)
                     /locus_tag="VE844_08460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01380.1"
                     /translation="MALDDTGRAIEPPLREGQKGEITLRLIFKGLLTLDFGHSPRGQI
                     AGKWQPAEGFMAGAWDAA"
     gene            complement(761..>1494)
                     /locus_tag="VE844_08465"
     CDS             complement(761..>1494)
                     /locus_tag="VE844_08465"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF015131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HZC01381.1"
                     /translation="WDGRAGALEKQALGPIQNPLHMNQNLDLLVEKLNAVPEYVEGFQ
                     KVFGTSVTPEALGKALAAFERTLVTRNAPFDRYMTGDWQAMSGGALRGMELFKGKARC
                     ILCHNGPNFTDSQFHNLGLPDAPLLSHPLVQAAIRFDAKRMNVPEYQSVREDLGRYLV
                     TKEEKDKGAFKTPTLRHVTQRDPYMHNGVFQSLEEVIDFYNRGGRAVAGKSPLIQPLG
                     LTSQEKRDLLAFLQALTGELPSVTP"
BASE COUNT          301 a          426 c          451 g          316 t
ORIGIN      
        1 cggcgagcgc ggggatatgc ccgagcggca gcggacgctg ctgaagggag aaacggcacg
       61 caaacacctg ggattcccgt ttctggggga tgtgcactag ggagcggcag aggtgtgggg
      121 cctccccggc tcagggatga ggtgcagcag agagtgtggt caggaatcaa gacatgcgtg
      181 gacgcttcgg cctcggtttg accggttgca cccgcaggat cccgcgttca acccacagcc
      241 tgaccttcgc ccccggctgc agaccgaagc gttcgcgaag ggctttgggg atggtgaatt
      301 gtcctttcct gctgacggtc actattttca tgggatctat tatactcgac tttggccatt
      361 tgagaataga gcccttgcgg accaggcaag ggcgggcagg cgcgacccgg aaattaggtg
      421 aagtctagtg gggacgtaga catcacgaaa ttacgcagcg tcccatgccc cggccatgaa
      481 gccctcagcg ggctgccatt ttcctgctat ctgaccgcga ggagaatggc caaagtcgag
      541 agtcaataac cctttaaata taaggcgcag ggtgatctcc cccttctgac cctcacgaag
      601 tggcggctcg atggcgcgtc ccgtgtcgtc aagcgccata agcctcccag aagaggactg
      661 cgccgcgcaa gtcgaatgtt aaggtcctcg gctcgagcca tgttgaggat ttcccctgtg
      721 taagcgacag aaaagggtga gtcccctaac gcgcgagctc ttaaggagtt acgctcggca
      781 gctctccagt caaagcctgg aggaaggcca gcaggtcacg tttctcttgg gatgttaacc
      841 ccaatggttg gataagcggg gattttccag cgacagctct gccaccacga ttgtagaagt
      901 cgatgacctc ctccagtgac tggaagaccc cgttatgcat atagggatcc ctttgcgtca
      961 catggcggag tgtcggtgtt ttgaatgctc ccttgtcctt ctcctccttg gtcacgaggt
     1021 aacggcctaa atcctctctg actgactggt actccggcac gttcatccgt ttggcatcga
     1081 agcggatggc cgcctgcacg aggggatgcg agagtaatgg ggcgtccggc aatcccaggt
     1141 tatggaattg gctgtcggtg aagttgggcc cgttatggca gaggatacag cgcgcttttc
     1201 ccttgaagag ttccatccct cgaagcgcac ccccggacat cgcctgccaa tcccctgtca
     1261 tatagcggtc gaagggcgca ttgcgggtga ccagagtccg ctcgaacgcc gccaaggctt
     1321 tgcccagggc ctctggggtc accgacgtac cgaacacttt ctggaaccct tccacgtact
     1381 ccgggacggc gttcagcttt tcgacgagca gatccaggtt ctggttcata tgcaggggat
     1441 tctggatcgg tcccagggcc tgcttttcaa gcgcccccgc gcgcccgtcc caaa
//
LOCUS       DASQSL010000826         1270 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_20735, whole genome shotgun sequence.
ACCESSION   DASQSL010000826 DASQSL010000000
VERSION     DASQSL010000826.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1270
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20735"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            230..556
                     /locus_tag="VE844_08470"
     CDS             230..556
                     /locus_tag="VE844_08470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01382.1"
                     /translation="MQRSPLKASILFKILFKILCLYFFAVFHGCVTSVIIRNGEDRDV
                     GGAQRGATACIAQSGVDGLVPFWVRIVDDGYAEGLGGCIAAKPVTVEKKAKKGRTNLS
                     PSQETR"
     gene            complement(674..>1270)
                     /locus_tag="VE844_08475"
     CDS             complement(674..>1270)
                     /locus_tag="VE844_08475"
                     /inference="COORDINATES: protein motif:HMM:NF027666.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007154 - cell communication [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Calx-beta domain-containing protein"
                     /protein_id="HZC01383.1"
                     /translation="GGGFPPGKTANQYAANIDLAPTIVDLAGASAGRVMDGRSLLPLA
                     RDSSIAPNRDILVETLAYQAVRNSSFLYVEHGTGEQELYDMRSGTPNYDPYQLQSRHA
                     EQSYSQIIGQLATQLNGLRTCSGASCDPAPIPAAGSLQFSAAAYEVNEGSGNATLTVT
                     RTGGSDGDAAVDFTTPGGTATAGADYTSTSGSLTGHGD"
BASE COUNT          247 a          352 c          375 g          296 t
ORIGIN      
        1 agtcgtctcc tcggtagacc gcgtgtagtc tgcttgacag ccctcgaggt tgagctgact
       61 tttcaatatc cggatgacct cttcgacttc ttggcgtaac ctatagagct ggcgcaccgc
      121 cggggcggtc aggctcagcc ggttagtcgc gtagtactct caccacacgt accttaatct
      181 ttcccgacaa gaaacccgtg gcctgccaat aaggttggcg cagatacgtg tgcagcggtc
      241 ccccctcaaa gcctcgattc tttttaagat tctatttaag attctatgcc tttacttttt
      301 tgcggttttc cacggttgcg taacttctgt cattatccgt aatggtgagg accgtgatgt
      361 cgggggagcc cagcgtggcg ccaccgcctg cattgcgcaa tccggcgttg acggtctcgt
      421 tcccttctgg gtcaggatcg ttgatgatgg gtatgctgaa ggtcttggcg gctgtatcgc
      481 cgccaagccg gttaccgtgg aaaagaaggc gaaaaaagga cgaacaaacc tctcgccgtc
      541 acaagagaca cgatagaggg gaagatgtga tgtgcttcat ttaccaccct ctgtcaagca
      601 ccgcccaagg tacctctaac gtcaggtaac ggttgatgaa gcacctgtat ttttcatctt
      661 cgggggcggc gagtcaatcg ccatgaccgg ttaggctgcc agaggtggat gtgtagtcgg
      721 cgcctgccgt ggcggtacca cctggcgtgg tgaaatcgac cgctgcatct ccatcgctgc
      781 cgcccgtgcg ggtcacggtg agtgtcgcgt tgccactgcc ttcgttgacc tcataggcgg
      841 ccgcactaaa ctgcaaggag ccggcagccg gtatcggcgc aggatcacag cttgcgcccg
      901 aacacgtacg aagtccattc agttgggttg caagctggcc tatgatctgg ctgtaagact
      961 gttcggcgtg acggctttgc agctggtacg ggtcgtagtt gggcgtaccg ctgcgcatgt
     1021 catagagctc ctgctcgccg gtgccgtgct cgacatagag aaatgatgaa ttgcgcaccg
     1081 cttgataagc gagggtttcc acgaggatgt cgcggttagg cgcaatgcta gaatcacggg
     1141 ccagcggcag gagcgatcgg ccatccatca cgcgaccggc actggcgccg gctagatcaa
     1201 cgatcgtcgg tgcaaggtct atgttggccg catattgatt agccgtcttt cccggcggga
     1261 acccgccgcc
//
LOCUS       DASQSL010000827         1163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_128351, whole genome shotgun sequence.
ACCESSION   DASQSL010000827 DASQSL010000000
VERSION     DASQSL010000827.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128351"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..956)
                     /locus_tag="VE844_08480"
     CDS             complement(<1..956)
                     /locus_tag="VE844_08480"
                     /inference="COORDINATES: protein motif:HMM:NF013676.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01384.1"
                     /translation="MPEPYAALLAALTAHGTNLGIATMANSTEGISVDMLQHVSRWFL
                     RQETLKAANRILVNYHHQLPLSHVWGEGLVSSSDGQRFGIEASSLLASFYPRYFGYYD
                     RAIAVYTHMSDQHSVFGERAISCIPREALYVLDGLLENDTILRPREHTTDTHGATQQL
                     FGLCFLLGFSFMPRLADLKDQQLYRLDRYTAYGALEPLFHGSVDINLIREQWDQLVRV
                     VASLLHRTAPAHVVLDRLAGSSPSDRLAKALTALGEVVKTVYILRYLHDPVLQQRVQL
                     QLNRGESRHKLASWVFFANQGVFRTGDYEEIMNKVSALSLLS"
BASE COUNT          249 a          312 c          376 g          226 t
ORIGIN      
        1 ttggacagca ggctcagggc gctgaccttg ttcataatct cctcgtaatc gccggtgcga
       61 aagacgccct ggttagcgaa gaacacccaa ctggccagct tgtggcgcga ctccccgcgg
      121 ttgagctgca actgaacccg ctgttgcagc acggggtcgt gcagatagcg aaggatgtag
      181 acggtcttca ccacctcccc gagcgcggtg agggctttag ccaagcgatc tgaaggagag
      241 ctgccggcga ggcggtccag gaccacatgc gctggcgcgg tgcgatggag caaggaagcg
      301 actacccgca ccagttgatc ccattgttcc cggatcagat tgatatcgac actgccgtgg
      361 aacaagggct ctagggcgcc ataagcggtg tagcggtcca gtctataaag ttgctgatct
      421 ttgagatccg ccaaccgtgg catgaacgaa aagccgagca aaaaacataa tccaaagagc
      481 tgttgggtcg ccccgtgggt atccgtggta tgctcccgag gacgcaagat ggtgtcgttc
      541 tcgagcagcc catcgagcac atagagtgct tcgcgcggaa tgcaggagat cgcgcgctcg
      601 ccgaatacgg agtgctggtc tgacatgtgg gtgtagacag cgatggctcg gtcgtagtag
      661 ccgaaatagc gggggtagaa cgaggccagt aaggagctgg cttcaatgcc aaagcgctgg
      721 ccgtctgagg acgagaccaa gccttcaccc cacacgtggc ttaacggcaa ttgatggtgg
      781 tagttgacca agatccggtt ggccgccttt aacgtctcct ggcgcaaaaa ccaccgcgat
      841 acatgttgca gcatatccac actgatccct tcagtgctgt ttgccatggt ggcgatgccg
      901 aggttagtgc cgtgggcggt gagtgcggcg agcagcgcgg catagggctc cggcacgtgg
      961 cggatgcgtc tccaacggtc ggaaggcctg ggtaaagtgg caccagctat cgacttccag
     1021 cagcaggtcc tcgatgcgaa cccgcggcag acgggtatgg accaagcggc gcagtttctt
     1081 gatccgcgct ggcatcggca gggcatcgcg gcgtttgagt ttcagcgcgc cgtcttggat
     1141 ttgggcaaag ggattatctg gta
//
LOCUS       DASQSL010000828         1334 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_183772, whole genome shotgun sequence.
ACCESSION   DASQSL010000828 DASQSL010000000
VERSION     DASQSL010000828.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1334
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183772"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            202..810
                     /locus_tag="VE844_08485"
     CDS             202..810
                     /locus_tag="VE844_08485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020514740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase-like oxidoreductase"
                     /protein_id="HZC01385.1"
                     /translation="MTGFISRNFRGRRRMPDQPGQLPPGQYLVEDFPVLSAGPTPRTP
                     LDQWDFSITGEVEQPRRWTWEEFRALPSETITTDIHCVTRWSKVDTVWEGVSIDTLLE
                     GVGEHGSYVIAFCDGGYTTNLPIEDVTGGKAWIAFSYDGEPLEPEHGGPARLLVPHLY
                     FWKSAKWVRGLRFVDEDEPGFWESLGYHMYGDPWQEQRHWGD"
     gene            780..>1334
                     /locus_tag="VE844_08490"
     CDS             780..>1334
                     /locus_tag="VE844_08490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008478946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HZC01386.1"
                     /translation="MARAAPLGRLTWRLGEVTSTRPLTPRVRSIMLSVSGWEGHLAGQ
                     QLDVRLTAEDGYQASRSYSIASAPEAAHLELIVERLEDGEVSSYLCDELRVGDRLELR
                     GPVGGYFVWKASMGSPLLLVAGGSGIAPLMAMIRHRHAASNQVPVRLLYSSRSPEDAI
                     YRDELDSMSSTDAAFEVIHTFTRSQ"
BASE COUNT          259 a          381 c          412 g          282 t
ORIGIN      
        1 gttattgcca ttgttaaaac aatgtctgga aaagaaaaat ttgcttgttt tctgctaata
       61 tagtgtcaat caggttcgga ggcctgtcca gcgtctacgg ctgtctaggg tgcgagaaag
      121 gtgacgtggg ccacatgagc ctagagggcc gataccgagc aactggcaat gattgccgtt
      181 catgaaggat tggaggccgc tatgactggg tttatctccc ggaacttcag ggggcgccgc
      241 cgcatgccag accagccggg gcaactcccg cctggtcaat atcttgtgga ggactttccc
      301 gttctctcgg ccgggccaac cccgcgcaca cccctggatc agtgggactt ctccattacg
      361 ggcgaggtgg agcagccaag acgctggaca tgggaggagt tccgtgccct tcccagtgaa
      421 accattacca ctgatattca ctgcgtcacc agatggtcaa aggtggatac ggtctgggag
      481 ggtgtttcca tcgatacgct cttagagggg gtcggagagc atggttcata tgtcattgcc
      541 ttctgcgatg gcggctacac caccaacctc ccaatcgagg acgttactgg tgggaaggcc
      601 tggattgcct tcagctatga tggcgagccc ctggagccgg aacatggcgg accagcccga
      661 ctgctcgtcc cgcacctcta tttctggaag agcgccaagt gggtacgagg gcttcgtttc
      721 gtggacgagg atgagccggg gttctgggag tccctaggct atcacatgta tggtgaccca
      781 tggcaagagc agcgccactg gggcgactga cgtggagact cggtgaagtg acctcaaccc
      841 gccccctgac gccgcgggtc cgcagcatca tgctatctgt gtcaggctgg gaggggcatt
      901 tggctggcca gcagctcgac gtgcgcttga ctgccgagga cggctaccag gcatcccgga
      961 gttactccat cgcctccgcg ccggaggccg ctcatctgga actgatcgtt gagcgcttgg
     1021 aagacgggga ggtctcatcg tacctctgcg acgagctacg ggtcggggac cggctggagt
     1081 tacgcgggcc cgttgggggt tacttcgtct ggaaggcttc catgggcagc ccactgctcc
     1141 tggtcgccgg aggctccggc atcgctcccc tgatggcgat gatccgtcac cgccacgccg
     1201 ccagcaacca ggtgccagtc cgcctgctct actcgtcccg gtctccagaa gacgctatat
     1261 acagggatga gctcgatagc atgagttcaa ctgatgcagc gtttgaggtg atccatacct
     1321 tcacccgctc ccaa
//
LOCUS       DASQSL010000829         1067 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_59832, whole genome shotgun sequence.
ACCESSION   DASQSL010000829 DASQSL010000000
VERSION     DASQSL010000829.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59832"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..898)
                     /locus_tag="VE844_08495"
     CDS             complement(<1..898)
                     /locus_tag="VE844_08495"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZC01387.1"
                     /translation="MKRREFLQRAGWGGVGMTALILGANRPPALAHPPSPYPSWTPPS
                     DKPPKRGGLLTRASAWDPPVLDPRLTNSVGLFQIATLTYNRLLRYPFADEAKGSDDLT
                     LKGDLAASWEGSADFQTWTFKLRQGVKWHNLPPLNGRELVAADIKYCYEAYAQEGVQS
                     FTFQEIDGMETPDKYTIRIQLKTPNTMFPQNVAEAVAVIFPREVLEEDGDLKKRMIGT
                     GPFILKENRRKVRVVLSRNPDYFDTGYPYIDEYRILSTPDAATRLAAFRSGQSDILGL
                     QSLTDVETLRKTNPTAVIQEINT"
BASE COUNT          202 a          300 c          325 g          240 t
ORIGIN      
        1 ccgtgttgat ctcttgtata accgcggtcg ggttggtctt acgcagcgtt tctacgtcag
       61 tcaggctttg tagtcccaaa atatcgcttt gcccgctacg gaaggctgct aggcgcgtcg
      121 ccgcatcggg ggtcgagagg atacggtact cgtcaatgta cggataccct gtatcgaaat
      181 agtctgggtt gcggctgagc accactctga ccttacgccg gttttccttc aggatgaagg
      241 gacccgtgcc gatcatacgc tttttgagat cgccatcctc ctctaacacc tcgcgcggga
      301 agatcaccgc cacagcttcc gcaacattct gcggaaacat cgtattgggc gttttcaact
      361 ggatgcggat ggtgtatttg tccggcgttt ccatgccgtc gatttcctgg aaggtaaacg
      421 attgtacgcc ctcctgcgca taggcttcgt agcaatactt gatatcggcg gcgaccagct
      481 cccgcccgtt gagcggtggc aggttgtgcc atttcactcc ctggcggagc ttaaaggtcc
      541 aggtctgaaa atcggcgctc ccttcccacg atgctgccag gtcgcctttc agcgtcagat
      601 cgtcgctccc tttggcttcg tcggcaaatg ggtagcgcag caggcggttg taggtgaggg
      661 tcgcgatctg gaagaggccc accgaattgg tcaggcgcgg atcgagcacc gggggatccc
      721 aggccgaggc acgcgtcagg aggccgcccc gtttcggggg tttatcactg ggcggcgtcc
      781 aggaagggta gggagatggg gggtgtgcca gggccggcgg gcggtttgcg ccaaggatga
      841 gagcagtcat ccccacacct ccccatcccg cccgctggag aaattctcgt cgtttcatgt
      901 ttactctcct tcgttagcga taatttctta agacacaggc tgatcgcgcc ggggtctcct
      961 ggccctccac attctggggg gatagggcaa atggctgact accatgccat agagcgacag
     1021 caaaagtcaa aggtaaccag cggcgcaagc agacagtcgg ccgggga
//
LOCUS       DASQSL010000830         1292 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_6777, whole genome shotgun sequence.
ACCESSION   DASQSL010000830 DASQSL010000000
VERSION     DASQSL010000830.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1292
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6777"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1162
                     /locus_tag="VE844_08500"
     CDS             <1..1162
                     /locus_tag="VE844_08500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01388.1"
                     /translation="LSLPETLVSEIEGRLQSQQKLLSKIVGVMFPALFGCRTPSELCR
                     VRGWDKNWPSRLLRVFPKRSWLKRLRRLGLEVLVPLWRHVAGKSEASQSRWQWTWAVD
                     DSVFHKYGEQLGLVGHWWSGQQHRVLAGIDGLLLVVVIGDGKLVVPVDFAVRRPEPVG
                     AGGPCRDKLSWAREMIDARLAALDKRGLHLPPPIITADSWFSDSKLMGHVRHRHQGTL
                     LVEGKVSYTFTLADGRHVNGHDFLEGEWPWRIHPWEPGVCYVRLQATSPTYGAVTVVI
                     VDEPGADRYYLLCLETALSGPVLIRRWRRRYWIEFVFRVLKHLLATESCQAHSEDAYY
                     GHVVLRLMASFVLFYTSRVVCKGRLTMEEIIFSLKHYWRFVDVEPLGLQALS"
BASE COUNT          246 a          325 c          427 g          294 t
ORIGIN      
        1 gttgagcctg cctgagacct tggtgagcga aatcgaaggc cgcttacaga gtcaacagaa
       61 gctgttgagc aaaatcgtgg gcgtcatgtt tcccgctctc tttggctgtc gcacgccctc
      121 ggagctctgt cgggtacggg gatgggacaa gaactggccc tcgcgtctgt tacgggtgtt
      181 tcccaaacgc tcctggctca agcggctgcg gcgtctgggc cttgaggtgt tggtgccgct
      241 ttggcgccat gtcgcaggca aaagcgaagc gagccaaagt cggtggcagt ggacctgggc
      301 cgtggatgac tccgtcttcc acaagtatgg cgagcagctg gggttagtgg ggcattggtg
      361 gagcggtcag caacaccgag tgctcgcggg cattgatggg ctcttgctgg tggtggtcat
      421 tggcgatggc aagttggtgg tgccggtgga ttttgccgtg cgtcggcctg agcccgtggg
      481 tgcgggagga ccttgccgag ataagctgag ctgggcgcgg gagatgatcg atgcgcgcct
      541 ggcagccttg gacaagcgcg gcttgcacct gcccccgccc atcatcacag ccgatagttg
      601 gttcagtgac tccaagttga tggggcatgt ccgccatcgg catcaaggca cgctgttagt
      661 agaggggaaa gtcagctata cctttacctt ggccgatggg cgccacgtca acgggcatga
      721 ttttcttgag ggcgagtggc cttggcgcat acatccctgg gagcccggcg tgtgctatgt
      781 gcgtttacaa gcgacgagtc ccacttacgg tgcggtcaca gtggtgatcg tggatgagcc
      841 tggggcggac cgctactatc tgctgtgttt agagacagca ctgagtggcc cggtcttgat
      901 tcgaaggtgg cgtcgtcgct actggattga atttgtcttt cgggtgctga agcatcttct
      961 ggcaaccgag tcgtgtcaag cccatagcga agacgcctat tatgggcatg tggtgttacg
     1021 cctgatggcg agctttgtct tgttctacac ctcgcgcgtg gtctgcaaag gccgtctgac
     1081 gatggaggag atcatcttta gcctgaagca ttactggcgt tttgtggacg tggaacccct
     1141 aggattacaa gcactttcat aggacaggcg tgggaatccc tcatggggac aggctaaagt
     1201 catcatacgg aaaactcaga agcaaacgtc ggcaggtgag gctcgcctgg tcgccatacc
     1261 caaagaactc gaacaggcta tgatcaagcg cc
//
LOCUS       DASQSL010000831         1061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_112935, whole genome shotgun sequence.
ACCESSION   DASQSL010000831 DASQSL010000000
VERSION     DASQSL010000831.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1061
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112935"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(299..844)
                     /locus_tag="VE844_08505"
     CDS             complement(299..844)
                     /locus_tag="VE844_08505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01389.1"
                     /translation="MRRSTLPTMCIVAMLFMALLAPMAMARDGTPTTATVSFGAWHTD
                     PPLDRFPNSSPANRNEHQLIPFNVTIEAGGTVNFIISGLHQVIVYDDGTRPDDIDTTL
                     TTTTTGAMPSPAVVLIDDPTNRIYRGLDPSLFPRDRVEVVYFPNPGVYLVICGVRGHF
                     VNDGMFGFVKVEKEEMMKVPR"
BASE COUNT          242 a          278 c          322 g          219 t
ORIGIN      
        1 atcagagcgc attatagcag aggcacggcc caaaccgcgt tatgattttg tttacgccag
       61 cgcggaatga agctgactgt atgggatgtt taaaggcgcc agagaggaga ggtggcgcaa
      121 aatgagacgg aacgcgaagg gggctttctg atgggcactg ggaaggcggt gcgtcttttg
      181 ggaaggaagg cgcggggata ctcccaacga ctactcgggc aggggagcgc gtagatttgc
      241 acggaaggcg acaggggatg ggggcaggaa tggaagaatc ctgccccggt gcgtgtgctc
      301 atcgggggac tttcatcatc tcctcttttt ccaccttcac gaacccgaac atgccatcat
      361 tgacaaaatg gccacggacg ccacagatga ccagatacac cccagggttc ggaaaataca
      421 cgacttccac gcggtcgcgc gggaacaagc ttggatccag tccccggtag atgcggttcg
      481 tcggatcgtc gatcagcacc accgccggcg atggcatggc gccagtggtc gtcgtcgtca
      541 gtgtggtgtc gatgtcgtca ggtcgcgtcc catcgtcata cacgatgacc tggtgtaacc
      601 cgctaatgat aaagttgacc gtccccccag cctcgatggt gacgttgaac gggatgagtt
      661 ggtgttcgtt ccggttggcc ggtgagctat tgggaaaccg atccagcggg ggatccgtgt
      721 gccacgcgcc aaagctgacg gtcgccgtgg tcggggtgcc atcgcgggcc atcgccatgg
      781 gcgcgagtaa cgccatgaaa agcatagcca caatgcacat ggttggcagt gtcgagcgtc
      841 tcatctggtc tcctcccccg gatggcgtat caagcacaac agacatgcac agcaaggagt
      901 gatacaggtg tccgttcgta caccctcatg ctcacgagag tcaaggaaaa atgccagact
      961 cccccgaatt tagtagtaaa cctttaactc atttgataga agaggctctt ctgtctacca
     1021 cgtaatccga tggcatgtgg ttttttccac cctgttacga a
//
LOCUS       DASQSL010000832         4834 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_86992, whole genome shotgun sequence.
ACCESSION   DASQSL010000832 DASQSL010000000
VERSION     DASQSL010000832.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4834)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4834)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4834
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86992"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..661)
                     /locus_tag="VE844_08510"
     CDS             complement(<1..661)
                     /locus_tag="VE844_08510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016700754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl--tRNA ligase-related protein"
                     /protein_id="HZC01390.1"
                     /translation="MHDHRKLGRELDLFDSDPLIGAGLPYWLPAGAAIRHAIEQYVRE
                     AERLAGYQHVYSPVLAKRELFELSGHWAHYREDMFPPMRVGGDDLVLRPSLCPNHALI
                     YRSRRRSYRELPVRIAELGAMFRSEASGVLGGLTRVRSIQLNDGHIFCRSDQVADEIA
                     AVLDMIDQTYTDLGIRAHRYRLSLRGDSDKYVDDSAMWDLGEQALAGVLTSRGLVYDA
                     EA"
     gene            1152..1291
                     /locus_tag="VE844_08515"
                     /pseudo
     CDS             1152..1291
                     /locus_tag="VE844_08515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017581854.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
     gene            complement(1572..2021)
                     /locus_tag="VE844_08520"
     CDS             complement(1572..2021)
                     /locus_tag="VE844_08520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01391.1"
                     /translation="MSSLPPELADPVEQLQTKLVEINGSEQTCLTNIVASASQGKSLP
                     EVQAVMARCRQASAASAAAAIDTFLHECSEIGTHANSFAKEAIVAATAKNVSGFWVKS
                     ESSAAAFASEAAAVLSDQGPDKTIQAIKDVYGDRASSINRYFAQLTT"
     gene            2931..3344
                     /locus_tag="VE844_08525"
     CDS             2931..3344
                     /locus_tag="VE844_08525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008478417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-binding protein"
                     /protein_id="HZC01392.1"
                     /translation="MFGPRIATGARKSLATRLGYPSAMKQPRASYDNFLSLQLTVGKI
                     VEVQDFERARNPSYKVRIDFGPEKGERWSVVQAKNEYSKEELVGRFIIAVLNFAPRNI
                     AGFQSEVLILGVPAEDGSLSLLEPSRGAKIGGMVY"
     gene            complement(3345..4517)
                     /locus_tag="VE844_08530"
     CDS             complement(3345..4517)
                     /locus_tag="VE844_08530"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HZC01393.1"
                     /translation="MLKRIKKSEGQARRLFLLDQPSNLVVQAYRDHRILQRQLQKYEE
                     LERLQDQHEHLKSNMKVLLEQGFEVRVVFDNTKVYRRLPNGMLSDPKDSELGIYDDFR
                     IDVFEGGQHGVIHAVNSYSPLFQYFPTYQKMAISYFEELWEKAESMAMFIEDLQDAVD
                     FAKSKIDYESNWLAIYEYALAQEDERMKTIELSRVEEVLREEAKARDLSIMRYLDVGT
                     CTGRYPIELRAWVAPTGKILGVDEDYDCVRFAQANIERKCPDERRIEILQRDFVAREV
                     GIQGEFDLITCMLGTLSHFGWDRSRTHEDCIQRALTRMAALLSSEGLLFLGTWSDYAC
                     KNRHMLGIYRQADRDRLAAWTPDTRELTDRLRSAGLSVVGQVHPEIRLNLTWCHRT"
BASE COUNT         1008 a         1440 c         1416 g          970 t
ORIGIN      
        1 cggcctcagc gtcgtagacg aggccacggg aggtgaggac gccggcaagg gcttgctcgc
       61 cgaggtccca catcgccgaa tcgtcgacgt acttgtcgct gtcgccgcgc agagataacc
      121 ggtagcggtg cgcgcgaatc ccgaggtcgg tgtaggtctg gtcgatcatg tccagtaccg
      181 ccgcgatttc gtcggccacc tggtcggacc ggcagaagat atgcccgtcg ttaagctgga
      241 tcgaccgcac tcgggtcaag ccccccagca ctccggatgc ctcggaccga aacatcgcac
      301 ccagctcggc gatgcgcacg ggcaactcac gatagctgcg ccgtcgggac cgatagatca
      361 gcgcatggtt agggcacagg ctcggccgca gcaccaggtc gtcaccgccc actcgcatcg
      421 gcgggaacat gtcctcgcgg tagtgcgccc agtgcccgga gagctcgaag agctcccgct
      481 tggccagcac cggcgaataa acgtgctggt agccggcgag ccgctcggcc tcgcggacgt
      541 actgctcaat cgcgtggcga atggccgcgc cggccggcag ccagtacggc aacccagccc
      601 cgatcaacgg gtcagagtca aatagatcaa gttcacggcc aagcttgcga tggtcgtgca
      661 ttgtcgtcgt ccttcctcgg caggaggcgg tgaacgacca gacaacaaag ccccggggcg
      721 ttcaccccgg ggcttgatgg ctgtgcgcgt tcagaacgcc gggatgctct ccggcgtcgt
      781 tgtcacagca acacgtctca tgatcacgag tataggctag cgccgttggt ggcctgcttc
      841 gtcgggtcag acctccacag ctcgcctgtt acgcctgaac gagctgctgg gtatctacga
      901 gagatcatcg tagccgaacc ggtggccacc gggcctttgc tacgcaacac cagccgcgtt
      961 tgcgccgagc gggcagatcc ttccacccgg tgatgtggtc tcggcagtgc agtgagccgc
     1021 atcgacagtg gtcgagaccg attttcctgt ggtggtcaat gtgatgcaac ggtggtccca
     1081 tccgtgaagg gatcggcatg gctcaaggca cggtcaagtg ttcaacgtgg agaagggatt
     1141 cggcttcgtc aggaggcccc gacgtcttcg tccatttctc ggcgatccaa ggatcgggct
     1201 tccgcaacct ggaggagaac caagaccaac ggatggagtt cgagatcacc agggccagag
     1261 agggccacag gcggacaagg ttcacccgct tcgaccgtca accgtgcggt tcgactgctg
     1321 cgtgccgcgg tcccgggcga cgatacgtga cggcctggcc ggcctggcgc cagctcgcca
     1381 cacgtcctgg tcaccaacga cgcccagggc gatgaccacc cgacgccccc acctgggcct
     1441 acagcctcat taccgcctct ggcgaacttg ggtgagcacg aacaagcccg ctggctggaa
     1501 gcgtaatcag gcttcggtgt gcaagaaccc gacggacggc cgctggcttc gggtgcaggc
     1561 atccggcctc atcaggtggt gagttgcgcg aagtaacggt tgatcgacga tgctcggtcg
     1621 ccgtagacgt ccttgatcgc ctggatagtc ttgtcgggtc cttggtccga gagcacggct
     1681 gctgcctcag acgcgaaggc ggcagcggag ctctccgact tgacccagaa gcccgaaaca
     1741 tttttggcgg tagcagcaac gattgcctcc ttggcgaacg agttggcatg cgtgccgatt
     1801 tcggaacact cgtgaaggaa ggtgtcgatc gctgctgcag cggaggcggc agacgcctgc
     1861 cgacacctag ccatgaccgc ctggacttcc gggaggctct tgccttgtga tgcgctggcc
     1921 acgatgttgg tcaggcaggt ctgctcggag ccgttgatct ccacgagctt cgtttggagt
     1981 tgctcgacgg gatcagccag ttcgggcggg agggacgaca tcgatggctc cttccgccgt
     2041 gacgggcgtg cgatacagcc tgacatcgat gcggtgcggg aggaaggacc aggccgcagg
     2101 cggccagctc gggcactccc gggtcagcat gacccgggag tgcgatctca gacgaagccg
     2161 accaaccggc agaccgccga ggtgctgaaa agtgactgtt gtgacaagcc cgcagcgcaa
     2221 aagggatcca aagtgtctca tgatcttgta ttggctggac acggaaagcg cctaccagcg
     2281 gaaagagtgg gccgcctggg ggtcgaaccc agacccaagg gttacggttc aaacgcccgc
     2341 cgtcaccccg gcgtaccatc cggctctggt caaagcggat gcgaagtgaa gctgacaccc
     2401 cttcacaccg agtcgttccc cggtaaaccc tgcggtttcc gacgggcaaa gaggtagatc
     2461 aactaatcgt tcgagcatcc acgccgatct tctcgccggc ccagcttgtc tgcggcagat
     2521 gagctggacc ctaagtcatc gcgacgctcg tctatggatg cgctcacctg agcggtccgg
     2581 gtccagcgcc gtggtgaaaa acaccacggc caccttgagg attcagcggc cgttacgggg
     2641 cgagacacct gcttaaagtg gggcttcgac ccttctgaat gaaaccagcg ctcgccgttc
     2701 cacaagctgg gatcataaga ctcatcgggg tgtcgaggta gccgagtgct gctgtagggc
     2761 tgactataag ggtgcgcgtg tccgcctacg tagggctcca cggttggcca agccgcgaag
     2821 aggcatcgga ccgctgagga aatttgacct cgaagggcga aagtagagtg aggccccagg
     2881 agggaaccga ggaggtgacc gtagtacatc ccaacaggtg acctcgtgcg atgttcggcc
     2941 cgaggatagc caccggagcc cgcaagtcct tggccacccg gctcggctac ccttctgcca
     3001 tgaaacaacc gagagcatct tatgacaact tcctcagcct tcaactcaca gtaggcaaaa
     3061 tcgtcgaggt tcaggatttt gagcgggcac gcaaccctag ttacaaggta cgaatcgatt
     3121 ttggccccga gaagggcgaa cggtggtctg tcgtccaagc aaagaatgag tactcgaagg
     3181 aggagctcgt tggtcgattc atcatcgccg tcctaaactt cgctcccagg aacatcgctg
     3241 ggttccaatc cgaggtttta attttaggtg ttcccgcgga ggacggctcc ctctcgctcc
     3301 ttgagccgag cagaggggcc aagataggcg gcatggttta ttaattaggt acgatgacac
     3361 cacgtcagat taagcctaat ttccggatgc acctggccaa ctacgctcaa cccggcactc
     3421 ctgagccgat ctgtcagctc tctcgtgtcg ggtgtccatg ccgcaagacg gtctcgatcc
     3481 gcctgccgat agattccaag catgtggcgg ttcttgcacg cgtagtctga ccatgtcccc
     3541 aagaacagta atccctcgct gcttaacagt gcggccatgc gggtcaatgc tctctgaata
     3601 cagtcctcgt gggttcgcga gcgatcccac ccgaaatgag acagcgtccc tagcatgcac
     3661 gtgataaggt caaactcgcc ctggatacct acctcccgag caacgaagtc tcgttggaga
     3721 atctcaattc ttctctcgtc gggacacttt cgttcaatgt tagcttgcgc gaaccgcacg
     3781 cagtcataat cctcgtccac accgaggatt ttcccagtcg gtgccaccca tgcacgtaac
     3841 tcaattgggt aacgaccagt acacgtgccc acatctaggt accgcattat agagagatcc
     3901 cgcgccttcg cctcctcgcg caggacttcc tctacccgcg agagctctat agtcttcatc
     3961 ctctcgtctt cttgggcaag agcatattcg tagatggcga gccagtttga ctcatagtca
     4021 atcttcgatt tggcgaagtc gacagcgtcc tgcaggtctt cgatgaacat cgccatcgac
     4081 tcagcctttt cccatagctc ctcaaaatag ctgatggcca tcttctgata cgtcgggaag
     4141 tactggaaga ggggggaata gctattgaca gcatgtatga caccgtgttg acctccttca
     4201 aaaacgtcga tccggaagtc gtcgtagatc cccaactctg aatctttagg atcggacagc
     4261 atgccattgg gcaacctgcg gtacaccttg gtgttatcga agacgaccct cacttcaaaa
     4321 ccctgctcta gcagaacctt catattgctc ttcagatgtt catgttgatc ctgaagccgc
     4381 tctagctcct cgtacttctg gagctgtcgt tgcaggatgc ggtgatctct ataagcctgc
     4441 acaacgaggt tagatggttg atccagaaga aacagacgtc gcgcttgacc ttcactcttc
     4501 ttgattcgct tcaacatctc ctcattagca gcaagaacct gcccctgagg acctgtccag
     4561 aaaccagacg acaaaaaggt cgtagtccag aaccttcgtt ctacgcgacc gagtgcttca
     4621 gcgtacgtgg atatgggtgc cgacgtagac ccaaactgaa ttgggatccg attgattggc
     4681 ttgcgcgcat ttgcgaaatc gtggagagtg cgcacaattc catcgagctt ctgacgttcc
     4741 cgccgaatgg tggctgcgta tccgagtcct aggtctgtga tcccatcact gcttgaggac
     4801 cgtaaaggga ggtcacgcca ttttggtgta acca
//
LOCUS       DASQSL010000833         1019 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_143666, whole genome shotgun sequence.
ACCESSION   DASQSL010000833 DASQSL010000000
VERSION     DASQSL010000833.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143666"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..843
                     /locus_tag="VE844_08535"
     CDS             1..843
                     /locus_tag="VE844_08535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020674821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HZC01394.1"
                     /translation="MLGTAISGLSLSRRDAPTEPMSYMYEPSVCVIAQGVKRVLLGDD
                     TYVLDVHHFLITSVDLPTVVQIIKASREKPYLGLILKLDRREMAQLMVDSHLPPPRAQ
                     QSSRGMATGAVTVPLLSACQRLIDMLAAPQDIPILAPLIQREILYRLLVGDQGARLRQ
                     IASAGSQSHQIAQAIDWLMRHYTLPLRIDDLAAHVHMSPSTFHQHFRALTAMSPLQYQ
                     KWLRLNEARRLMLTERHDAATAAFQVGYESPSQFSREYRRVFGAPPLRDIKSLRHMAD
                     SAPV"
BASE COUNT          194 a          298 c          300 g          227 t
ORIGIN      
        1 ctgcttggga ccgcgatctc aggcttgtcg ctttctcggc gggacgcgcc cacggagcca
       61 atgagctaca tgtacgagcc gagcgtctgt gtgatcgccc agggggtcaa acgcgtgctg
      121 ctcggagacg acacgtatgt gttggacgtg caccattttt tgatcacgtc cgtggatcta
      181 cccacggtgg tgcagattat caaagcgagc cgggagaagc cttacctggg gctcatcttg
      241 aaacttgatc ggcgcgagat ggcacagctg atggtggaca gccatctgcc cccgccgcgt
      301 gcgcagcagt cgagccgtgg catggcgacc ggcgcggtca cagtgccgct gctcagcgcc
      361 tgtcaacggt tgatcgacat gctggctgca ccgcaggata tcccgatcct ggcaccgctc
      421 atccagcggg aaatcctgta ccggttactg gtgggcgatc aaggggcgcg tctgcggcaa
      481 atcgcgtcgg cgggcagtca gagccatcag atagcgcagg ccatcgattg gctgatgagg
      541 cactacaccc tacctctacg tatcgatgac ctcgcagcgc acgtccatat gagtccatcg
      601 accttccatc agcactttcg ggcgctgacg gccatgagtc cgctgcagta ccaaaaatgg
      661 ttgcggttga acgaagcgcg gcggttgatg ctcacggagc gccacgatgc agcgaccgcg
      721 gcgttccagg tcggctatga gagtccctcc caattcagtc gcgagtaccg ccgggtgttt
      781 ggcgcgccgc cattacgcga tatcaagtct ttgcgtcaca tggcggacag tgcgccagtc
      841 taggggtact ctatcctttc taaggattac attgtaagaa gcgtcaatta ccgactattg
      901 ctaatagtcg gtaaggactc gtgccgacta cttattcttc atcaggtcgc cgagattctc
      961 taccgactct ccgagtcccc ttggttgtca tcgctttctt gtttgacttt gtgctgcgc
//
LOCUS       DASQSL010000834         1074 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_112945, whole genome shotgun sequence.
ACCESSION   DASQSL010000834 DASQSL010000000
VERSION     DASQSL010000834.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112945"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            573..824
                     /locus_tag="VE844_08540"
     CDS             573..824
                     /locus_tag="VE844_08540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01395.1"
                     /translation="MREPTLERRLPVRFRLGEHESGTLFIICEPLQPPTATDYPLLSR
                     GSMTFTFREGTTLEQATDMAQLMDERLAEMHCLHLNPPT"
BASE COUNT          237 a          316 c          286 g          235 t
ORIGIN      
        1 gaagaaggat tgggatatga gctttgcaga aatcatcctt ttcctccggt gatcttgctt
       61 accagcgatg acaaaaactg gacatgccct gaatgcggcc ataagaaaca cataggagat
      121 cctatcgtag cacccgttca acgcctctac gccgtgtctt tcgatttcgc agaatgcctg
      181 gagcgcgcaa tgcgttctga tgcctcacgg gtgcggcggt ggcgggcagg cgatccccac
      241 gacgcgcagg cgtttcgcga tgggctcaag agcgcaagac agagccacca tacgcgtagc
      301 catgcggttg ttggaatttc cagattccct cggatttagt ggtaaaatcc caagccgttg
      361 atattactga ggttatttga agccacagca ggtgacgaaa cgtcgtccac aggtcgtgta
      421 gtcacaggac atcatgaggt gagctgctct caacattcga gacccattgg tctaccacta
      481 aatccgatgg aatgtggact atgctatacc tctgtgagac acgtatggtt tcctcaacct
      541 caatatgtcc gctgtgcaga ggagaacgcc tgatgcgtga gcctaccctt gagagaagac
      601 tccccgtccg gttcagactc ggggaacacg aaagcggcac cttgttcatt atctgcgaac
      661 ccctgcagcc cccgaccgcg acagactatc cactcctctc ccgtggttcc atgaccttca
      721 ccttccgtga gggcactacc ctcgaacaag cgactgacat ggctcagctc atggatgaac
      781 ggctcgcgga gatgcactgc ctccatctca accctccaac atgaccgcgg tcagatcgca
      841 cgagccacgc cgcctctcgc gtcatggctc gtgcctgagg acatccacca tcagtcggct
      901 tctccgggga gtttagcggg gggtatacct caggtgcgag agcaggtccg tcatctgctg
      961 cgccaagtgt ctcgcgtgcg cttcggtgac gccgtccagg cattcgaacg caaacacccc
     1021 ggagatgagg gttgaagtct tcgtcattgc tctgttgatc ctcgccaacg gcgt
//
LOCUS       DASQSL010000835         1046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_183803, whole genome shotgun sequence.
ACCESSION   DASQSL010000835 DASQSL010000000
VERSION     DASQSL010000835.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183803"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..771
                     /gene="hprK"
                     /locus_tag="VE844_08545"
     CDS             <1..771
                     /gene="hprK"
                     /locus_tag="VE844_08545"
                     /inference="COORDINATES: protein motif:HMM:TIGR00679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr(Ser) kinase/phosphatase"
                     /protein_id="HZC01396.1"
                     /translation="LGYFEVEYLAGLREISREDAIRQLLSHDPDCLIVAEAQKVPEEL
                     RQACEMEGTPLFSSSLSSNQLVDDLHYYLSNLLAEVVTLHGVYMEIMSIGVLLTGESG
                     VGKSELALELITRGHRLIADDAPEFSRIAPDIINGTCPKALIDFLEVRGLGILNVREL
                     FGAGALRGNKYLRLIIRLERMDHESVVRLNRLEGSYRTRKVLGIDIPEILIPVAPGRN
                     LAVLVECAARNHILRMSGYNSTDDFMERQRALMAQETR"
     gene            771..>1046
                     /locus_tag="VE844_08550"
     CDS             771..>1046
                     /locus_tag="VE844_08550"
                     /inference="COORDINATES: protein motif:HMM:NF015620.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HZC01397.1"
                     /translation="MERRLIVVTGLSGAGKTVVLNALKDLDYYCIDNLPIGLLIEFCQ
                     HIWERYHPFYQYVAAGIDARNPRGLLAKFPNILHDLGSPDLLTAELVF"
BASE COUNT          216 a          274 c          307 g          249 t
ORIGIN      
        1 ttaggctact tcgaggtcga atatctcgcc gggttacggg agatctctcg ggaagatgcc
       61 atccgccaat tgctgagcca cgatcctgat tgcctcatcg tggctgaagc gcaaaaggtg
      121 cctgaagaac tgcgacaggc ctgtgagatg gaaggcacac cgctcttttc atccagtctt
      181 tccagcaatc agttggtcga tgacctccat tattatctct cgaacctcct ggcggaggtg
      241 gtgaccctgc atggtgttta tatggagatc atgtcgatcg gggtgttact gactggggag
      301 agcggcgttg gcaagagcga attggcgctc gagttgatca cccgcgggca ccggttgatc
      361 gccgatgacg ccccggaatt ctcgcgcatc gcccccgaca tcatcaatgg cacctgtccc
      421 aaggcgctga tagactttct cgaggtgcgg gggcttggga tcttaaacgt gcgtgagctc
      481 tttggagcgg gcgcgctgcg ggggaataaa tacctgcgcc tgattatccg tctcgagcgg
      541 atggatcatg agagtgtcgt gcggctcaat cgcctggagg gcagttaccg gacccgtaag
      601 gtattgggga tcgatatccc cgagatcctg atcccggtcg cgcctggccg aaacctcgcg
      661 gtattggtgg aatgcgcggc acgcaatcat atcctgcgaa tgagcggtta caattcaacc
      721 gatgacttta tggagcgcca gcgcgctttg atggcccagg agacgcgctg atggagagac
      781 ggctgattgt ggtgacagga ctgtcgggtg cgggcaagac cgtggtgctc aatgccctca
      841 aagacctcga ttattactgt atcgataatc tgcctatagg cctcttgatc gaattttgtc
      901 aacatatttg ggaaaggtat catcctttct accagtatgt agcagcaggc atcgatgcgc
      961 gcaatccccg cgggctcttg gcgaaattcc caaatatcct gcatgatcta ggttcccctg
     1021 atctcctcac cgcagagctt gtgttc
//
LOCUS       DASQSL010000836         1642 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_75022, whole genome shotgun sequence.
ACCESSION   DASQSL010000836 DASQSL010000000
VERSION     DASQSL010000836.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1642
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75022"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1461
                     /locus_tag="VE844_08555"
     CDS             <1..1461
                     /locus_tag="VE844_08555"
                     /inference="COORDINATES: protein motif:HMM:NF033559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC01398.1"
                     /translation="IECIRQALLGQALAVKEALSGAIYGVLFVLNELARHCGLHRALG
                     DSRLAKLALFLVLARIAHPGSRLSAVRWALDHAVKAVLGLNAFDEDDLYEALDWVALH
                     QEAIEDRLYGDYVQRVGQTPALILYDVTSSYLEGEQNELGAYGYNRDGKKGKKQIVIG
                     LLTAKDGEPLSVEVFEGNTTDPKTFGSQLDKLAHRFIIKEVVLVGDGGMIKADGKDAL
                     TQAQFKYITALTDPQIRKLIRQDVIQPALFDKHVVEVTHAGKRLILRRDPATSRKERH
                     RREDKIERLKTLIDARNAFVAQSKRAKPESGWKNLQGWVRRHKLAGFVELTLKDRNIE
                     LQIDEQRQQQAAWLDGCYCIESDAPSEHLSKEDIHDRYKDLQKVEQNFRRLKTAFLEV
                     RPIFVRKEHRTRGHVFIAMLSLKLARLMEKRLQDVFGTTEDNPKAETLDSALMALSRL
                     CLQHYTVGDQEIIGLPRPDPRQGKILSALKVRLTPP"
BASE COUNT          390 a          456 c          462 g          334 t
ORIGIN      
        1 attgagtgca ttcgacaggc gttgttgggg caggccctgg cggtcaaaga agcgctgtcc
       61 ggcgctattt atggggtctt attcgtgctc aatgaattgg cccgccactg cgggcttcat
      121 cgcgccctgg gggactcacg cctggcgaag cttgccctgt tcttggtgct ggctcggata
      181 gcccacccgg ggtcacgcct gtccgcggtc cgttgggcgc tggatcatgc cgtgaaagcg
      241 gtcctggggc tgaacgcttt cgatgaagac gacttatatg aagcactcga ttgggtggca
      301 ttgcaccaag aagcgatcga ggaccgcttg tatggagact acgtccagcg agtgggtcaa
      361 acgccggcct tgattttgta cgatgtcacc tcctcgtact tggaaggcga gcaaaacgag
      421 ctgggggcgt acggctacaa ccgggatggg aagaaaggga aaaagcaaat tgtcatcgga
      481 ttgttgacgg ccaaagacgg ggagccattg agtgtggagg tgtttgaggg gaataccacc
      541 gaccccaaga ccttcgggtc gcagctcgat aagctggcgc atcgcttcat catcaaagag
      601 gtggttctgg tgggcgatgg gggcatgatc aaagcggacg ggaaagacgc cctaactcaa
      661 gcgcagttca agtatattac cgccctcacg gacccccaaa tccgaaaatt aatccggcaa
      721 gacgtcatcc agcccgctct ctttgataag cacgtcgtgg aagtgaccca tgccggcaag
      781 cgcctgattc tacgccgtga tccggcgacc tctcggaagg aacgccatcg ccgcgaggat
      841 aaaattgaac gcttgaagac gcttatcgat gcgcgcaacg cctttgtcgc gcaatccaag
      901 cgggccaagc ccgagtcggg atggaaaaac ctgcaagggt gggtgcgccg tcataaactc
      961 gctgggtttg tcgagctgac attaaaggac aggaacatcg aactgcagat cgatgaacaa
     1021 cgccaacagc aggccgcatg gttggacggt tgctactgca tcgaaagcga tgcgccatcg
     1081 gaacatctca gcaaggaaga catccatgac cgctataaag acctccaaaa agtcgagcag
     1141 aacttccgac gcttgaaaac ggcctttctg gaagtcaggc ccatttttgt tcgcaaagaa
     1201 cacaggaccc gcgggcatgt ctttatcgcg atgctcagct taaagctcgc tcgcttaatg
     1261 gaaaaacggc tccaggacgt ttttggcacc accgaggaca atcccaaagc ggaaaccctg
     1321 gacagtgcct taatggcgct ttcccgcttg tgcctccagc actacaccgt cggtgaccaa
     1381 gaaattatcg gccttccccg ccccgatccc cgccagggaa aaatcttgtc ggccctgaaa
     1441 gtcagactca cccctcctta accccccttg tagccaggca aaacatcctg cttgcaaggc
     1501 gaaaatcttt tgtttttagt tacatacgcg agttcgcgcc gcttcgtcct gggggaagat
     1561 gagtccgaca gactcctagg gcgacgctcg cggcaacctc gcttctaaag tagaacgact
     1621 atgccatcct acggtcctga ct
//
LOCUS       DASQSL010000837         1025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_20829, whole genome shotgun sequence.
ACCESSION   DASQSL010000837 DASQSL010000000
VERSION     DASQSL010000837.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20829"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..206)
                     /locus_tag="VE844_08560"
     CDS             complement(<1..206)
                     /locus_tag="VE844_08560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008611574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZC01399.1"
                     /translation="MLSATSASGAKVAVEMRQANLKYQSKNRQVHALKDIDLAIEEGS
                     FVCLVGPSGCGKTSILRLIAGFLQP"
     gene            complement(282..>1025)
                     /locus_tag="VE844_08565"
     CDS             complement(282..>1025)
                     /locus_tag="VE844_08565"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZC01400.1"
                     /translation="AATAIASELPIQVIGIHDVIAESESLVAKENSGISGLADLRGKR
                     VAVPFGSTTHFALLQALSDEGIPQEDVTILDMQPQEMVAAWDSENIDAGYVWEPSLGQ
                     MVSNGGRIVLTSKDLLNRGILTADLIVATDEFVENHSDLATNYVRAIDDSAEFYRSDP
                     DESATLVAEEIGLEPDVVANQMNGLVWLNAEEQLSPEYMGTPDNVGALAQTLKDTGDF
                     MMGQGAIPSSPELSAYREKVNPEFWQQIA"
BASE COUNT          196 a          324 c          267 g          238 t
ORIGIN      
        1 ggttgtagga agccggcgat tagccgcagt atcgaagtct tgccacatcc agaaggacca
       61 actaagcaaa caaagcttcc ttcctcaatc gcaaggtcga tatccttcag agcatgcacc
      121 tgtctgttct tgctctgata tttcaggttc gcctggcgca tctcgacggc tacctttgca
      181 cctgatgcac tcgtcgcgct aagcactccc tgtccctttc gcaagccacg cggctacaac
      241 ggacacagct tcttctcctc ccgctacgac ggcgctcact gctaagcgat ctgttgccag
      301 aactccgggt tgaccttttc tctataagcc gagagctccg gcgaagaggg tatcgccccc
      361 tggcccatca taaagtctcc ggtgtccttg agggtctggg cgagggcccc aacgttgtcg
      421 ggggttccca tatactcggg tgagagttgc tcctcagcgt tcagccacac taaaccgttc
      481 atctggtttg cgaccacgtc tggttccaag cctatttcct cggccaccag ggtagcggac
      541 tcgtccgggt cggaccggta gaattcggcc gaatcgtcga ttgcccggac atagtttgtg
      601 gctaagtccg agtgattctc cacaaactcg tcggtagcca ctataaggtc cgccgtgagg
      661 atgccccgat tcaacaaatc tttgctagtg aggactatcc tcccgccgtt actcaccatc
      721 tggccgaggg acggttccca tacgtagccg gcgtcgatgt tctcgctgtc ccacgcggcc
      781 accatctctt gcggctgcat gtccaggatt gtcacgtcct cctgggggat accctcatcg
      841 cttaaggcct gcaacaaagc gaagtgcgtg gtggatccga aaggaaccgc aaccctcttt
      901 cctctcaggt ctgctagccc ggagatgccg ctgttctcct tggcgaccag agactcgctc
      961 tccgcgatca cgtcgtggat accgatcacc tggatgggca gctcggaagc gatcgccgtt
     1021 gccgc
//
LOCUS       DASQSL010000838         1487 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_157418, whole genome shotgun sequence.
ACCESSION   DASQSL010000838 DASQSL010000000
VERSION     DASQSL010000838.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1487)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1487)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1487
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157418"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..1376)
                     /locus_tag="VE844_08570"
     CDS             complement(72..1376)
                     /locus_tag="VE844_08570"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01401.1"
                     /translation="MPLPLTNADTLFEQLLQDLPPETIPLAREFKAFARAKKVKTPEQ
                     LLRLVLLYCGLDKPLREVAGTFTVLYESITDQSVAERLRACGPWIKATLRHMLPLSAV
                     SALPQGLRFLVIDASTVQAPGAKGIDHRLHIAMDLVSLFIEVLIRDVHTGETLKHFTL
                     APGDVALADRGYAQVQGMSDALKRGAALIVRLNPFSVVVKDARARPLSLRDALKRQTS
                     ETIRTVEVRLQSSDGQDEVHGWVHAYRLSTEQAGRARQPCRKRHKTGTPKAETLYLAG
                     WVLVFTTLAPALLSPATIMALYRCRWQVELAIKRWKSVLDVDALRAKANSPLAEVWLH
                     GKLLYAVLLERRMQRHLGARGDRLDQERVVTRWRVWGLLKDEIAPMITGSLFWKEEAW
                     ETCLKVLAERPRRRRLQQLPPEAVAVLYVNDNGQKQGPQIAA"
BASE COUNT          316 a          435 c          425 g          311 t
ORIGIN      
        1 ccctcgatca acacggtggt atcaacccca taagcgccag gataagcata acttctcctc
       61 cagacttcgc gtcatgcagc gatctgcggg ccttgttttt ggccgttgtc gttgacatag
      121 agtacggcaa cggcctcggg aggtagctgc tgtaaccgtc ggcggcgagg gcgctcggcc
      181 aacaccttga ggcaagtttc ccacgcctcc tctttccaga acagcgagcc ggttatcatg
      241 ggagcgatct cgtctttaag caagccccaa acacgccacc gcgttacgac gcgttcctga
      301 tccagacgat cgccacgcgc gccgagatga cgctgcatgc gccgctccag cagcaccgca
      361 tagagtaatt tgccatgtag ccagacctcg gccagagggc tgttggcctt ggctcgcaac
      421 gcgtccacat cgagcacact tttccagcgt ttaatcgcga gttcaacttg ccagcgacag
      481 cgatagagcg ccatgatggt ggcgggagag aggagcgctg gagcgagcgt cgtaaatacc
      541 aacacccagc cggctagata caaggtctcg gctttgggcg tgccggtttt atggcgcttt
      601 cggcacggtt gccgagcccg tcccgcttgc tctgtactga ggcgataggc atgcacccag
      661 ccatgcacct catcctggcc gtccgatgac tgcaagcgca cctccaccgt gcgaatcgtc
      721 tcgcttgtct ggcgtttcaa ggcgtcacgt aacgataaag gccgagccct ggcgtccttt
      781 acgaccacac tgaaggggtt gagccgcacg atcagcgcgg cgcctcgctt gagagcgtca
      841 ctcatccctt ggacctgggc ataaccgcgg tcggccaagg cgacatcgcc tggcgccaag
      901 gtgaaatgct tcagggtttc gcccgtatgg acatcacgga tgagaacctc gatgaacaag
      961 gacaccaggt ccatggcgat atggaggcga tggtcgatcc ctttggcgcc gggtgcttgc
     1021 accgtgctgg cgtcgatgac taaaaagcgc agcccctggg gcagggccga caccgccgac
     1081 agcggcagca tgtgccttaa tgtggctttg atccacggac cacaggcccg caagcgctcg
     1141 gccaccgatt ggtccgtgat ggactcgtag agcacggtaa acgtaccagc cacctcacgt
     1201 aagggcttat ccaagccaca atataagagc accagacgca agagttgctc gggtgttttc
     1261 actttcttgg cccgtgcaaa ggctttgaac tctcgcgcca aggggatcgt ctcgggtggc
     1321 agatcttgca aaagttgctc aaagagggta tcagcattgg tgaggggcaa cggcatggta
     1381 tggtactcct ttatggaggg agctcattgt taacccatgc agtatgcctc tcatttacaa
     1441 tcttgacagt cgaaagttct tctaagcatt tgattttgaa aggattt
//
LOCUS       DASQSL010000839         1408 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_20858, whole genome shotgun sequence.
ACCESSION   DASQSL010000839 DASQSL010000000
VERSION     DASQSL010000839.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1408
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20858"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            159..>1408
                     /gene="dxs"
                     /locus_tag="VE844_08575"
     CDS             159..>1408
                     /gene="dxs"
                     /locus_tag="VE844_08575"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012697793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HZC01402.1"
                     /translation="MNNYPLLEMIASPKDLRKLPESQLVLLSAELRAFLLESVSRSGG
                     HFAAGLGTIELTLALHYLFNTPEDRLVWDVGHQAYPHKVLTGRRDRLHTIRQWNGLAP
                     FPKRDESPYDTFGVGHSSTSISAALGMAIAAKHTGNRRKIVAIIGDGGMTGGMAFEAL
                     NHAGNLDCDLLVILNDNAMSISPNVGALANRIAQVLSGKIYTTVREGSKKVLGKMPPV
                     WELARRAETHVKGLIIPGTLFEELGFNYIGPIDGHDLATLINTLRNIKALRGPQLLHV
                     ITRKGKGYAPAEEDPVKYHGVTPFDPAQGIVSAKTPSKLTYSQVFGDWLCDMAAQDKR
                     LVAITPAMCEGSGMVRFQREFPERYLDVGIAEQHSVTLAAGMACEGLKPVVAIYSTFL
                     QRAYDQLIHDVVNQNLPVLFAIDRA"
BASE COUNT          298 a          399 c          399 g          312 t
ORIGIN      
        1 agcgcgctag actttatttc cgttgtcagc atcaggctgt aatacggtga aggtatacca
       61 aaatcacacg ggcggatgcc ggtgggtggt tgcctcacga atttgattgc ttcaaaccgg
      121 ggggtcaatt cgtaccctaa ctataaacga acaatgacat gaacaactat ccacttctcg
      181 agatgattgc ttctcccaag gatctgcgca aacttcccga atcacagttg gtgttgctgt
      241 cggcggagtt gcgcgctttt ctgcttgaat ccgtgagcag gagcggtggc cactttgcag
      301 cggggcttgg gaccatagag ctcaccctgg ccttgcatta tttgtttaat acaccggaag
      361 atcgcctggt ttgggacgtc ggccaccagg cttatccgca caaggtcctc acgggacgcc
      421 gtgaccggct gcacaccata cgccagtgga acggcctggc ccccttcccc aagcgggatg
      481 agagtcctta cgataccttt ggggtcggac attcaagcac ctctatcagt gctgccttgg
      541 gcatggcgat cgccgccaaa cataccggca accggcgtaa gatcgtggcc atcattggcg
      601 atggcgggat gaccgggggt atggccttcg aggcgttaaa tcatgccggc aatctggact
      661 gcgatctact ggtgatccta aatgacaatg ccatgtccat ctcacccaac gtgggtgcgc
      721 tggccaaccg catcgcccag gtgctgtcgg ggaagatata cacgaccgtg cgcgaaggca
      781 gcaaaaaggt gctcggtaag atgccccccg tgtgggagct cgctcgccgc gccgaaacgc
      841 atgtcaaggg tttgattata ccgggcactt tatttgaaga gcttgggttc aattatatcg
      901 ggccgatcga tggccacgat ctggctacgt tgatcaacac cctgcgcaat atcaaggctc
      961 tgcgcggtcc tcagctgctt catgtcatca cccgaaaagg caagggttac gcgccagcgg
     1021 aagaggatcc ggtcaaatac cacggggtca ccccctttga tcccgcccag ggcatcgtgt
     1081 ctgcaaaaac gccctccaag ctcacctata gccaggtctt cggcgattgg ctctgcgata
     1141 tggccgccca agataaacgg ctggtcgcca ttaccccggc catgtgtgag ggctctggca
     1201 tggtccggtt tcagcgggaa ttccctgagc gctatctcga cgtcggtatc gccgaacaac
     1261 acagcgtgac gctcgcggcg gggatggcct gtgagggact caagccggtg gtggcgatct
     1321 attctacctt tttgcagcgc gcctacgatc agctcatcca tgatgtggtc aatcagaatc
     1381 taccggtgtt gttcgccatt gaccgggc
//
LOCUS       DASQSL010000840         1195 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_183876, whole genome shotgun sequence.
ACCESSION   DASQSL010000840 DASQSL010000000
VERSION     DASQSL010000840.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1195
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183876"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..897
                     /locus_tag="VE844_08580"
     CDS             <1..897
                     /locus_tag="VE844_08580"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HZC01403.1"
                     /translation="QRHGLAADGVVGASTLAALNVPVGARIRQIELNMERWRWLPQDL
                     GERYILVNIANFALDVVENGQSVLTMRVVAGKPTRRTPFFSAQMTYVVLSPHWYVPPT
                     IAIQDKLPLIRRDPKYMARQNLKIFSDGPGGATRVDPRAIDWSSVSARNFPYRLRQDP
                     GPRNALGRVKFMFPNSYHVYLHDTPSRELFARAERAFSSGCIRLEKPIELAEYLLRDD
                     PRWSRQSILSSIDRGREQVVHLPAPIPVHLFYWTTWMSDEGVVHFRKDIYERDHVLDG
                     ALQKAVPSIPGEGVVEIVMTRP"
BASE COUNT          239 a          340 c          350 g          266 t
ORIGIN      
        1 caacggcacg ggttagctgc cgatggggtc gtcggagctt cgacgttagc agcactgaac
       61 gtccccgtgg gagcgcgtat acgtcagatc gagcttaaca tggagcgctg gcgctggctc
      121 ccgcaagatc taggcgagcg ctatattctc gtcaatatcg ccaattttgc gctagatgtt
      181 gtggagaacg ggcaatcggt cctgaccatg agggtggtgg cgggtaagcc cacgcgtcgc
      241 accccattct ttagcgccca gatgacctat gtagtgctca gcccacattg gtatgtccct
      301 ccgaccatcg ccatccaaga taagttgccg ttgatccgtc gtgaccctaa gtacatggca
      361 cgacagaact taaaaatctt cagcgacggc ccgggcggtg caacccgcgt ggaccctagg
      421 gcgatcgact ggtcttcggt gagtgcgcgc aacttcccgt atcggttgcg ccaggatccg
      481 gggccgcgca atgccctcgg ccgtgtaaag ttcatgttcc cgaactctta tcatgtctat
      541 ctccatgaca ccccctcccg agagttattt gccagggcgg agagggcatt cagctccggc
      601 tgcatccggc ttgagaagcc gattgagctg gcagaatacc tcttgcggga tgaccctcgg
      661 tggtcccggc agagcattct ctccagcatt gacagaggga gggaacaagt cgtgcactta
      721 ccagctccaa tacccgtcca cttattctat tggaccacgt ggatgagtga tgagggagtg
      781 gtgcattttc gcaaggatat ttacgagcga gaccacgtgt tagacggggc tcttcagaag
      841 gctgtcccct ctatcccagg agagggagtg gtcgaaatag tgatgacacg tccatgatcc
      901 tatcccgccg agatgatttt ggtgctagga acccctcctc ctctggagga ggggccgttg
      961 gcccaacgct tcgacgggct gagcggcttg gaacggtaac tctgcgcaga tattccccct
     1021 cccccaccac ggcggagccg tgggattccc catacctgct ttggcctaat tgttaatacc
     1081 ctgctctgcg cgctgatgac cggctgctgc gtttgtgctg tgccgctagg cagcatatag
     1141 atccgtacca gttctgggtt tgcggctaag tatcgcgggc ggcaagggga acgaa
//
LOCUS       DASQSL010000841         4021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_6859, whole genome shotgun sequence.
ACCESSION   DASQSL010000841 DASQSL010000000
VERSION     DASQSL010000841.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4021
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6859"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..349
                     /locus_tag="VE844_08585"
     CDS             <1..349
                     /locus_tag="VE844_08585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01404.1"
                     /translation="HVNFYRILREEDGLPVPHKKEKKVKSPTPFPAEKVQFPTPPEPE
                     KVKSQPPKSLESLAITVAKVVETKERKDKEDTPVSLLSEKPERDNPFWCEAHGFCHGE
                     QLPDHRPDCVREW"
     gene            complement(401..532)
                     /locus_tag="VE844_08590"
     CDS             complement(401..532)
                     /locus_tag="VE844_08590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01405.1"
                     /translation="MTEFIADDRVSTDRQGASGLGLAAPREAVARVISVGQSLGCGV"
     gene            complement(615..788)
                     /locus_tag="VE844_08595"
     CDS             complement(615..788)
                     /locus_tag="VE844_08595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01406.1"
                     /translation="MPMTDDAPQTVARFLRWDGQPGHALRMAEPRPDDEEDEDTIDDE
                     EDLDDEEDEEEES"
     gene            1157..1561
                     /locus_tag="VE844_08600"
     CDS             1157..1561
                     /locus_tag="VE844_08600"
                     /inference="COORDINATES: protein motif:HMM:NF024139.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC01407.1"
                     /translation="MHVTLGQAAKHLGIGKATLSRYLKQGKLSGQKQADGSYRIDVSE
                     LDRIRDLMRPHRAQSTEHSTTPLETRMLQRELDLLRETLAHKDTLIEDVKSDRDKWAR
                     MAESLQEEKQKLLSDGRAGSRRGVWAWLSGRS"
     gene            1620..1763
                     /locus_tag="VE844_08605"
     CDS             1620..1763
                     /locus_tag="VE844_08605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01408.1"
                     /translation="MEEPRGVAIMVALISGLARLLAGSTLLREVFYHQCGMTPARDDH
                     RFE"
     gene            1845..2228
                     /locus_tag="VE844_08610"
     CDS             1845..2228
                     /locus_tag="VE844_08610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01409.1"
                     /translation="MILSVLVLLVIVVVLWIFSASIAQWLYLAQSFDAVAFLREYRLA
                     AAVLGGCLLVLLALIWLSKWQAARPAAGGRPPQDVEVAVDAVKSELKADILMLESKVV
                     EKIQSHERRISNVEEQEGIENPEKN"
     gene            2681..3652
                     /locus_tag="VE844_08615"
     CDS             2681..3652
                     /locus_tag="VE844_08615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020560831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZC01410.1"
                     /translation="MSRMSRERMEKALEQLKVISEADHAKVKALANIVRPLRSVLHKT
                     PDDYGMTGWKDIYFPSDDGIPLEGWYIPAKGGESDKLIIFNHALPMCRAGFPGHLGEP
                     WSTYDAVEIDFVIQYKHLTDAGYNVLTYDIRNHGNSTAANGGLSGIGQWEWRDCVGVK
                     TYVDTHPTLGKMTVGLYSQCMGGNSQYEAIARRPELFENVQCMCSPMVVSMAAIYSAM
                     SEIQGVSQYQELIDLELLKMGAFLAHEMTPHKAAPRVKMPVLMVQVLQDAWTRNPEDA
                     QQTFDLLGSTEKELVWIEDTTKRFKDGYNYFGRHPEKVLAFFDKHMK"
BASE COUNT          877 a         1154 c         1200 g          790 t
ORIGIN      
        1 ccacgtcaac ttttaccgaa ttctccggga agaggacggc ttacccgttc cccataagaa
       61 ggagaaaaag gtgaaatctc caacaccttt tcccgcagaa aaggtgcaat ttccgacacc
      121 cccggagccg gaaaaggtga aatctcaacc gcctaagtct ttggaatcct tggcaataac
      181 cgttgctaag gtagtagaga ctaaagagag aaaagacaaa gaggacacgc cggtttctct
      241 cttgtctgag aagccggaac gggacaaccc cttctggtgt gaggcgcatg gcttttgcca
      301 cggcgagcaa ctgcccgatc accggcctga ctgcgtgcgg gagtggtgaa cctctcagag
      361 actctgacgc ccatgctgag ccgtggatgc aggtctaggc tcagaccccg caccccaggg
      421 actgacccac gctgatgact cgggccacgg cctcgcgcgg cgcggccaag cctaagccgc
      481 tggctccctg ccggtccgtg gacacccggt catcggcgat gaactctgtc atacgtatgc
      541 cctctctgat acatgcgcgc ggcgtgatgt cggctcgcgg tgatgagtgt tttatttgcg
      601 ggatgcaggc ttagctatga ttcctcctcc tcgtcctcct cgtcgtcaag atcttcctcg
      661 tcgtcaatcg tgtcttcgtc ctcctcgtcg tccgggcgtg gttcagccat cctgagcgcg
      721 tggccaggct ggccatccca acgcaagaat cgcgcaaccg tctgcggcgc atcatccgtc
      781 atcggcatgc caaatcctcc tcagggctcc cctgtatcag gcaggcagac gccacccttc
      841 ctcgcgatct gccgtcgtgt cacaatcgac ccgcgagccg acacccttcc gcgctccaga
      901 gattatgaca cagatggtgt tgtgcaagct ctacacggtg gttgagcggt cgaccccacg
      961 ttgagaggcc gagcgggaag agatggaacg gggcaggtac gacacgccag accaccgttt
     1021 ctttgcggct tccacgcggc gacagggggt tgtcattcgt tccagtaagg gtttcaggtg
     1081 ggaggccgct gacttgcgga cctgcattcc ccgtgatagg gttcaggaac acctattgac
     1141 accactggag ccccctatgc acgtgaccct cggacaagcc gcgaaacact taggcatcgg
     1201 caaggccacg ctctcgagat atctcaaaca gggcaaactt tcggggcaaa agcaagcgga
     1261 tgggagttac cggatcgacg tgtcggagtt ggaccggatc cgggatctga tgcgacccca
     1321 ccgggcccag tcgacggaac actcaacaac ccctctcgaa accaggatgt tacagcggga
     1381 acttgacctg ttacgtgaaa cgctggcgca caaggacacg cttatcgagg atgtgaagag
     1441 cgaccgggac aaatgggcac gcatggcgga gagtctccag gaggaaaaac agaagctcct
     1501 cagcgatggc cgcgcggggt caagacgggg tgtatgggcg tggctgtcgg gaagatcctg
     1561 atcattcttt tcgtgcaaac gcccattatg agtcgccttg agatctgatg gggccacggt
     1621 tggaggagcc taggggtgta gccatcatgg tggcgctgat cagtggcctc gcgcgtctgc
     1681 ttgcgggcag caccctcttg cgtgaagtct tctaccatca gtgcggcatg acgccggctc
     1741 gcgatgacca tcgcttcgaa tgagacagtg ccccacttgt gtcgtaatgg tgaaggggag
     1801 aaaccatgag acaggtatca gcgttcctac gacgatatct atctatgatt ctctcggttc
     1861 ttgtcctcct cgtcatcgtg gtggtcttgt ggatcttctc cgcatccatc gcccagtggc
     1921 tctacttagc ccagtcattt gatgccgtcg ccttccttag ggagtatcgt ctcgccgctg
     1981 ccgttctcgg tggctgtctg ttggtgctgc ttgcactgat ctggctttcc aaatggcagg
     2041 ccgctcgccc agctgcaggg ggcagacctc cacaagatgt cgaggttgcg gtggatgccg
     2101 tgaaaagtga gctcaaagca gatatcctca tgcttgagtc aaaagtggtg gagaaaattc
     2161 aaagccatga acggcggatc agcaacgttg aagagcagga gggcattgaa aatcctgaga
     2221 aaaattaagg cttccttatc atcttcagcg ctgtgcctcc gccttgcggg caagccgcaa
     2281 cgctccgcac agcccggagg gaaggccctg aaaatatggc acgctccgcc ggtataaacg
     2341 ccctaggaaa ggaaggaaca ggggggcgct accttcctat cccccctccc ctgaaaatcg
     2401 tttagaaggc aaacatggcc aagaggtcct ttacctcagt ggggaattaa gccaactcgc
     2461 ctgcaccacc cctcaggctg tcacctgcca cgggccatga tgccgacatg tttgacgtag
     2521 aagacccaga gttgggctat gatgctgaaa aatttctgta tcagccgccc caacggggga
     2581 tgagacccag cggaaatatt ccacatatgc aatagttcgg cgaccggagt tcgcgtggga
     2641 acgaagacgg cgtgccccca tcgcaccgag ggagaccatc atgagcagaa tgtccagaga
     2701 gcgcatggaa aaggccttgg agcaactcaa ggtcatctcc gaggcggatc atgcgaaggt
     2761 caaggcgctg gcgaacatcg tcagaccgct gcggagcgtg ttgcacaaga cgcccgacga
     2821 ctacggcatg accgggtgga aggatatcta cttcccctcg gacgacggca tcccgttgga
     2881 aggctggtac atccccgcca agggcggcga gagcgacaag ctcatcatct tcaatcacgc
     2941 gctgcccatg tgtcgggcgg ggtttccggg gcatctgggc gagccgtgga gcacctacga
     3001 tgcggtcgag atcgacttcg tgatccagta caagcatttg accgacgccg ggtacaacgt
     3061 gctgacgtac gacatccgca accacggcaa cagcaccgcc gcgaatggcg ggctgtccgg
     3121 gatcggccaa tgggagtggc gcgactgcgt gggcgtgaag acgtacgtgg acacgcatcc
     3181 cacgctcggc aagatgacgg tcggattgta tagccagtgc atgggcggca actcacagta
     3241 cgaggcgatt gcccgccgac cggagttgtt cgagaacgtc cagtgcatgt gcagcccgat
     3301 ggtcgtgtcg atggcggcga tctactcggc gatgtccgag attcaggggg tgagccagta
     3361 tcaggaactg atcgaccttg aactcttgaa gatgggcgcg ttcctcgccc acgagatgac
     3421 gccgcacaag gctgcgccgc gcgtgaagat gccggtgctg atggtgcagg tgttacagga
     3481 cgcctggacg cggaaccccg aagacgcgca gcagacgttc gacctgctcg gcagcacaga
     3541 gaaggaactg gtctggatcg aggacacgac gaagcggttc aaggacgggt acaactactt
     3601 cggaaggcat ccggagaagg tcctcgcctt cttcgacaag cacatgaagt gatctgttgc
     3661 cggcggctcg ggcgttcgct cgtagcccat tcggccgccg aaccaggcga tgcagcaggc
     3721 cgcggctgct gagcttggtc gttagacagt gggccttcgc gagtcggctt aactccccac
     3781 tgaagtaaag gaggtcggct cttcgtcact tttggtgaag ggtgccgaaa tgtccttatg
     3841 ttgcaggcag ttatgcggct ggagcgtttt ggggtcatct ctccgagaaa cccttgcaca
     3901 ccaaggggtc ccgctgaaaa agcgtcacca aaagtgacga tgaccccaca tcctatactc
     3961 tagtgcggag tgaactcgac cttgtttgga aaacaccagc ttgaccggct cccagcgccc
     4021 c
//
LOCUS       DASQSL010000842         1913 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_6862, whole genome shotgun sequence.
ACCESSION   DASQSL010000842 DASQSL010000000
VERSION     DASQSL010000842.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1913
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6862"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1913)
                     /locus_tag="VE844_08620"
     CDS             complement(<1..>1913)
                     /locus_tag="VE844_08620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012408785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid adenylation domain-containing
                     protein"
                     /protein_id="HZC01411.1"
                     /translation="ALQPERSLSHSPLFQVMLVLQNTSPGELELPGLSLSALELEGVA
                     AKFDLTLMLGETAAGLAGAWEYSTDLFERATIRRLGQHFETLLRGIVEDPGRALADIP
                     LLPAAEREQVLVAWNQTQAAYPRKLCMHQLFEGQAHQTPDAMAVVYEDQGLSYGALNA
                     RANQLAHHLRGLGVGPEVRVGICVERSLELVVGLLGVLKAGGAYVPLDPSYPQARLAF
                     MLEDAKVRVLLTQAHLTERLPETAAGVLCVDADWPLMAQQSPADPLNLSTPLNLAYVI
                     YTSGSTGTPKGVLVPHKGLLNLVFWHQDAFAVTASDRATQLAGTAFDASVWEIWPYLS
                     KGASLYIVRREILSSSVSLRDWLVSKAITISFVPTPLAETLFLLEWPGATSLRVLLTG
                     GDKLHQYPSPSAPFKLINNYGPTENTVVTTSGLVVLQGQEALAPSLGRPIANTQLYVL
                     DAHLQPVPIGVPGELYIGGAGLARGYLGRPELTAERFIPHAFGQEPGARVYRTGDLVR
                     YLPDGNLEFIGRVDYQVKVRGFRIELGEIEAVLGSHPGVQECCVVVREDHPGESRLVG
                     YYVAGAAVVEPEALRGYLRAKLPDYMVPGVFVGLEALPLTPNGKVDRKALPVPERGGA
                     QGEYEVPRTPTEEL"
BASE COUNT          440 a          682 c          467 g          324 t
ORIGIN      
        1 agctcctcag tcggcgtgcg tggcacctca tactcccctt gcgccccacc ccgctcaggc
       61 accggtaagg ccttgcgatc caccttgcca ttgggcgtca gcggtaaggc ctctaacccc
      121 acaaacaccc caggcaccat gtagtctggc agcttagcgc gcaaataccc ccgcagcgcc
      181 tccggctcta ccaccgccgc ccccgccacg tagtaaccca ccagccgcga ctccccaggg
      241 tggtcttcac gcaccaccac acagcactcc tgcaccccag gatgactgcc taataccgcc
      301 tcaatctcac ctaactcaat gcgaaaacct cgcaccttga cctggtagtc cacccgcccg
      361 atgaactcta aattgccatc cggcaaatac cgcactaagt cccccgtgcg atacacccgc
      421 gccccaggct cctgaccaaa agcatgcgga ataaaccgct ccgccgtcag ctccgggcgc
      481 cctaaatacc cccgcgctaa acccgccccc ccaatgtaaa gctccccagg taccccaatg
      541 ggcaccggct gcagatgcgc atccaataca taaagctgcg tgttggcaat cggacgacca
      601 agagaaggcg ctagcgcctc ttgtccctgc aaaaccacca gccccgaggt ggtgacaaca
      661 gtattctccg tcgggccgta gttattgatg agcttgaaag gcgccgaagg ggagggatac
      721 tgatgtagct tatcccctcc cgtgagtaat acccgcaaac tggtagcccc gggccattcc
      781 aatagaaaca gcgtctcggc aagcggtgtg ggcacaaaac taatggtgat agccttagaa
      841 accaaccagt cccgcagaga gacagatgag ctcaagattt cacgacggac aatgtaaagg
      901 ctggcccctt tagacagata aggccagatc tcccataccg atgcatcaaa tgccgtccct
      961 gccagctgag ttgctcggtc agaagcggtg actgcaaacg catcctggtg ccagaagacg
     1021 agattcagga gacctttgtg cggcaccaac acccccttag gtgtgccagt cgagccggag
     1081 gtataaatga cataggcaag attaagcggc gtgctcagat tgagcggatc ggctgggctt
     1141 tgctgggcca tcaacggcca gtccgcatcc acacaaagca cacccgcagc agtctccggt
     1201 aagcgctcgg tcaagtgcgc ctgggtcagc agcacccgga ccttggcatc ctcgagcatg
     1261 aaagccagcc gcgcctgcgg atagcttggg tctaagggca catacgcccc gccggctttg
     1321 agcaccccca ataaccccac caccagctct agcgagcgct ccacacaaat cccaacccgc
     1381 acctccgggc ccacccctaa cccacgcaga tgatgcgcca gctgattggc ccgcgcattg
     1441 agcgccccat agcttagccc ctgatcctca tacaccaccg ccatggcatc cggcgtctga
     1501 tgcgcttgcc cctcaaacaa ctgatgcatg cacagcttgc gcggatacgc cgcttgcgtt
     1561 tggttccacg ccaccagcac ctgctcacgc tcggcggccg gcaatagcgg gatgtctgcc
     1621 agcgcccgtc caggatcctc gacaatgccc cgcaacaagg tctcaaaatg ctgccctaag
     1681 cgcctgatcg tggcacgctc aaataagtcg gtgctgtact cccatgcccc tgcaagcccc
     1741 gcggccgtct caccgagcat caaggtcagg tcaaacttgg ccgcaacccc ttctagctcc
     1801 agcgcactca agctcaaccc cggcagctca agctccccag gcgaggtgtt ttgcagcacc
     1861 aacatcacct gaaacagcgg actatggctt aagctgcgct caggctgcag cgc
//
LOCUS       DASQSL010000843         1742 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_157475, whole genome shotgun sequence.
ACCESSION   DASQSL010000843 DASQSL010000000
VERSION     DASQSL010000843.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1742
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157475"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1160)
                     /locus_tag="VE844_08625"
     CDS             complement(<1..1160)
                     /locus_tag="VE844_08625"
                     /inference="COORDINATES: protein motif:HMM:NF005548.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZC01412.1"
                     /translation="MASTPSQQQQSYDCIILGAGPAGMGAAIALVEHGVTDILIVDRN
                     RLIGGLARTEMFDGNRFDIGPHRFFTKNREINALWNKTLGDDFRPVDRLTRIYYNRQF
                     FHYPIKAFETFWKLGLAESAHALVSFLYEQMAPQTEARTFEDWIVQKFGSKLYRTFFK
                     TYTEKVWGIPCHQIGAEWAAQRIKGLDITQVLKNAVFGDPQQEIKTLVDRFDYPLLGA
                     GQMYEAMMDTVVSRGGTVMLNSRVTAFHRQDHDIAAIAVTDGEGQTFRVTANHYFNSI
                     PLTHFFHLVRPEESAEVQQAARTLYYREHITVNLVINGAQLFPDQWIYIHAPDVKMAR
                     LANYNNFSPAMVKNPAQSAVSVEYFTFKHEGLWRMTDEDLTQLAIDELGHLK"
     gene            1344..>1742
                     /locus_tag="VE844_08630"
     CDS             1344..>1742
                     /locus_tag="VE844_08630"
                     /inference="COORDINATES: protein motif:HMM:NF017416.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01413.1"
                     /translation="MSLVRYLQHWLSGTGTPLQVTDFVPQSDPIRQWADTFPWAALVE
                     AIEQSFDKRFPKTSQRGRRPVPIRVLLALELLKHELGASDEAICQRLRTDFAVMYACG
                     LREYRINPAQAHFVLPATLCEFRGRIDEALM"
BASE COUNT          339 a          475 c          500 g          428 t
ORIGIN      
        1 aatttcaagt ggcccagttc gtcgatggcg agttgcgtga ggtcttcgtc ggtcatccgc
       61 cataaccctt catgtttgaa cgtgaaatat tccacgctca cggcgctctg cgctgggttt
      121 ttcaccatcg ccggggagaa attattatag ttggcgagcc gcgccatctt gacgtccggg
      181 gcatggatgt agatccactg gtccgggaag agctgggctc cgttaatgac caagttcacc
      241 gtgatatgtt cccggtaata cagcgtcctt gccgcctgct ggacctctgc cgattcctcc
      301 gggcgcacca ggtgaaagaa gtgcgtcagg gggatgctgt taaaataatg gttggcggtt
      361 acgcgaaaag tctggccctc gccatcggtg acggcgatcg cggcgatgtc atggtcttgc
      421 cgatggaagg cggtcacgcg gctgttgagc atcaccgtgc cgcctcggct taccacggtg
      481 tccatcatgg cctcatacat ctgcccggcg ccgaggaggg gatagtcaaa tcggtccacc
      541 aacgttttga tttcttgctg aggatcaccg aaaacggcgt ttttgagaac ctgtgtgatg
      601 tccagcccct tgatgcgctg cgcggcccac tccgccccga tctggtgaca ggggatgccc
      661 cagacttttt ccgtgtaggt cttgaagaac gtccggtaca gcttggagcc gaacttctgc
      721 acaatccagt cctcgaacgt ccgcgcctcg gtctgggggg ccatttgctc gtagaggaac
      781 gagacgagcg cgtgagccga ttccgctagg cccagcttcc agaacgtctc gaaggctttg
      841 atcgggtagt ggaaaaattg gcggttatag taaatgcggg tgagtcggtc aacggggcgg
      901 aaatcgtcgc caagcgtctt gttccacagg gcattgatct cccgattttt ggtgaagaag
      961 cggtgcggac cgatgtcaaa gcgattgcca tcgaacatct ccgtccgtgc taaaccaccg
     1021 attagtcgat tgcgatcgac aatcaagatg tcagtgacgc catgttcgac taacgctatg
     1081 gcggccccca tgccggccgg tcctgcgcct aggatgatac agtcgtagga ttgttgctgc
     1141 tgagatggcg tggatgccat gttctctatg ctcctaaaac gctggatcgt gaagtggact
     1201 tgacagattg ctactgctgc atatccaaat atggaagtat gtaggagtca ttcgtttttt
     1261 cgattcgctc attggacctt gtgaagcaga gcgttccatc gtatcctgcg gctctcattt
     1321 ccctttgatc aggagagcct cagatgagcc ttgttcgcta tcttcaacat tggttaagtg
     1381 gcactggcac ccccttgcaa gtaacggact tcgtgcctca aagcgatccc attcggcagt
     1441 gggccgatac cttcccctgg gctgctctgg ttgaggccat cgagcagagt ttcgacaaac
     1501 ggtttcccaa aacctctcaa cggggtcggc ggcctgtgcc gatccgtgtc ttgttggccc
     1561 tggagctact caagcatgaa ctgggtgcct cagatgaagc gatctgccag cggttgcgca
     1621 ccgactttgc cgtcatgtat gcttgtggtc tgcgtgagta ccgtatcaac cccgctcagg
     1681 cccactttgt gctgcccgcc accctgtgcg agtttcgtgg ccgcattgat gaggccctca
     1741 tg
//
LOCUS       DASQSL010000844         1532 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_20916, whole genome shotgun sequence.
ACCESSION   DASQSL010000844 DASQSL010000000
VERSION     DASQSL010000844.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20916"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..258)
                     /locus_tag="VE844_08635"
     CDS             complement(<1..258)
                     /locus_tag="VE844_08635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01414.1"
                     /translation="MASPNLIRWGGFAALLAGAFFIAEAATIPFVGDLHWAFHAIDSP
                     AHAFLAVGLVGLYLWQTSQGRFGWLGTVGFILIVTASVLITL"
     gene            complement(334..>1532)
                     /locus_tag="VE844_08640"
     CDS             complement(334..>1532)
                     /locus_tag="VE844_08640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01415.1"
                     /translation="LCVALISFALLFYFLASPTSPTDTPPALTAFMRALSLAFPTVGA
                     LVASRRPENPIGWIFCGTGLLYGVQAFASGYADYALLERTGSLPGGELLAWISRWIGV
                     PVLPLAGALLVLLFPNGKLLSRKWQPVVLVAVCGSAMLALSAALAPGPLSFQPTFDNP
                     LGLGGAIGKLGSSESIDAGGVVEILVRVGFFFVLVSWLFAVAAMITRMDQARGAERQQ
                     LKWFVYTVALLVVGFLAALLGFGQHSVAWNIGIAAFNFLPIAAGIAILRYRLYDIDVV
                     INRTLVYGVLTAALALVYVGSIVLLQGLFRALTGETSQLAVVASTLAIAALFVPLRQR
                     VQAFIDRRFYRRKYDVAKTLQAFNTRLRDDVDLDNVADDLVEVVKETMQPAHVTLWLR
                     RSEGKE"
BASE COUNT          376 a          448 c          433 g          275 t
ORIGIN      
        1 gagggtgatc aacacggagg cggtaacgat cagaataaaa cctactgttc ctaaccaccc
       61 aaagcgtcct tgactcgtct gccagagata aaggcctacc agtcctaccg ccagaaatgc
      121 gtgggcgggg gagtctatcg cgtggaatgc ccaatgaaga tccccgacga acggaattgt
      181 cgcggcttcc gcaatgaaga acgccccagc caacagggct gcgaatcctc cccatcggat
      241 aaggtttggt gatgccatgc gcgctttcct ccttttccca atccttctgt cccgccttgc
      301 tagacgatcg ttgcgacgaa gttcgggtaa actttattct ttcccttctg atcggcgtaa
      361 ccacaatgtg acatgcgccg gctgcatggt ctctttaacc acctctacta ggtcatcggc
      421 gacgttgtca aggtccacat cgtcgcgcag cctggtattg aacgcttgca aggtcttcgc
      481 tacatcgtac ttccggcgat agaagcggcg atctatgaac gcctgtactc tctggcgcag
      541 gggcacgaac aacgcggcta ttgccagggt ggaagccact acggcgagct gggaggtctc
      601 accggtaagg gcgcggaata atccttggag caggactatg ctaccgacgt acaccagcgc
      661 cagcgctgcc gttagcacac cgtagaccaa ggtgcggtta atgacgacgt ctatgtcgta
      721 gaggcgatat cggagtattg ctatgccagc ggcgattggc aggaaattga aagcggctat
      781 gccgatattc caggcaaccg aatgctgccc gaatcctagc aaggctgcca ggaacccgac
      841 gaccagtagg gcaacggtat acacgaacca tttgagctgc tggcgttctg cccccctcgc
      901 ttggtccatg cgcgtgatca ttgccgcaac ggcgaaaagc cagctcacaa gaacgaagaa
      961 aaaacctact ctaaccaaga tctcaactac gccgccagcg tcaatcgact cggatgagcc
     1021 caatttgccg atagctccac cgagcccgag cgggttgtcg aaggtcggtt gaaaagacaa
     1081 aggacccggc gctagcgcag ccgagagggc gagcatcgcg cttccgcaaa ccgccaccaa
     1141 aaccacgggc tgccatttcc tagacaacag cttgccgtta ggaaacagca gaaccaacag
     1201 cgccccggct aggggtagga ccgggacccc gatccaccgt gaaatccaag ccaagagctc
     1261 tccaccgggc agcgaaccgg tacgctcgag cagcgcgtaa tctgcgtatc cgctggcgaa
     1321 ggcttgcacc ccgtagagga ggcccgtccc gcagaagatc cagccgatag ggttctcggg
     1381 gcggcgcgag gctaccaatg cgccaaccgt ggggaacgcc aatgacagcg ccctcatgaa
     1441 cgcagttaaa gctggtgggg tatctgtcgg cgaggtcgga gaggcgagaa aataaaatag
     1501 caacgcgaag gagattaggg ctacgcagag ca
//
LOCUS       DASQSL010000845         1064 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_87108, whole genome shotgun sequence.
ACCESSION   DASQSL010000845 DASQSL010000000
VERSION     DASQSL010000845.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87108"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1064)
                     /locus_tag="VE844_08645"
     CDS             complement(<1..>1064)
                     /locus_tag="VE844_08645"
                     /inference="COORDINATES: protein motif:HMM:NF014581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraM recognition domain-containing protein"
                     /protein_id="HZC01416.1"
                     /translation="QLFLAARTPEVAERPLPYVSSLINLGINEIAARLNAVSPTLAQT
                     FLGAPYKPGKDYEKNEFRVDSWETVSARLYPFMTPDIVRCFAGSDFTAADLYFADQPV
                     YVFISFHESDLLSMGPLIKFVCESLMMELLNAYDDAPDEMKAIARRILWSMDEAGRIG
                     IPHLPEHASTVVGRKITLSMSAQSRSQFTAMYGRDRTDNLFNNIRTQLVFCQADFATA
                     EHYSKRMGETSGFAHSESEHGGETTGTGKSERAIPVMSPQDFMAMDKGELVCFSLEHK
                     PIRLKSMDWRRHPRLKERIGIKPPEIAKAPPLATSDEAPAPKPSPLSSWHFDPQLFRK
                     WPQFVAVERGVGEHAQDTDQA"
BASE COUNT          228 a          284 c          313 g          239 t
ORIGIN      
        1 gcctggtcag tgtcctgggc atgttcaccc actcccctct cgacagcaac gaactggggc
       61 cacttgcgaa acagctgcgg gtcaaagtgc caggatgaca agggcgacgg ttttggcgct
      121 ggcgcttcgt cagaggttgc aagcggcggt gccttggcaa tttcaggcgg tttgatccca
      181 atgcgttctt tcagccgagg atgtcgacgc cagtccatgg atttgagacg aatcggttta
      241 tgctccagag aaaaacagac gagttcccct ttgtccatgg ccataaaatc ctgtggactc
      301 atcacgggga tggcccgttc tgattttccc gtaccggtcg tctccccccc atgttcgctt
      361 tccgaatggg cgaagccaga ggtctccccc atccgctttg agtagtgctc ggcggttgca
      421 aagtccgcct gacagaatac cagttgcgtc cggatattgt taaacaggtt gtctgtccga
      481 tcccggccat acatggccgt gaactgagac cgcgactgcg cgctcatgga aagcgttatc
      541 ttgcggccga cgaccgtgct ggcgtgttcc ggcaggtggg gaatgccaat gcggcctgcc
      601 tcatccatgc tccagagtat ccgccgggct atcgctttca tctcgtccgg cgcatcgtcg
      661 taggcgttga ggagttccat catcagcgac tcgcagacaa atttgatcag gggccccatc
      721 gacaataaat ccgactcgtg gaaactgatg aagacataga ccggctggtc ggcaaagtag
      781 aggtcggcgg cagtgaaatc agacccggca aagcagcgga caatatccgg ggtcatgaag
      841 gggtagagtc tggcggatac cgtctcccag gaatcgacac gaaactcatt tttctcataa
      901 tcttttcctg gtttgtaggg ggcgccaaga aacgtttgcg ccaaggttgg ggagacagcg
      961 ttgagtcgtg cagcaatctc attgatgccg agatttatta ggctggaaac atatggcaga
     1021 ggccgttccg caacttcagg ggttcgtgcg gcgagaaaga gctg
//
LOCUS       DASQSL010000846         1057 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_6901, whole genome shotgun sequence.
ACCESSION   DASQSL010000846 DASQSL010000000
VERSION     DASQSL010000846.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6901"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1057
                     /locus_tag="VE844_08650"
     rRNA            <1..>1057
                     /locus_tag="VE844_08650"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          252 a          269 c          339 g          197 t
ORIGIN      
        1 gccgcataac ctgaggtgcg atgccagctg gcctttggcc ggcgagtccc tgacgccatg
       61 cccccgagaa aagcctcgcg gcgaggaaat gcgtgcccgt accaaaaccg acacaggtgg
      121 gaaagtagag aatactaagg cgagcgagct aaccatcgtt aaggaactcg gcaaaattgt
      181 cccgtaactt cgggagaagg gacgccccag tagagtgaag cccctcgcgg gtggagctcg
      241 agggggccgc agtgaattgg cccaagcgac tgtttaccaa aaacacaggt ctctgctaag
      301 tcgcaagacg acgtataggg gctgacgcct gcccggtgcc ggaaggttac gtggaggtgt
      361 tagggcttcg gcccgaagca ccgaaactaa gccccggtaa acggcggccg taactataac
      421 ggtcctaagg tagcgaaatt ccttgtcggg taagttccga cctgcacgaa tggcgtaacg
      481 acttgggcgc tgtctcaacg atgggctcgg tgaaattgca gtctcggtga agatgccgag
      541 tacccgcggc tagacggaaa gaccccgtga acctttacta caacttgata ttggagtctg
      601 aagcacctag ctcaggatag gtgggaggct gtgaagcgcc ggctgcggct ggcgtggagc
      661 caatcttgag ataccaccct tgatgtacta ggcctctaac agcactccgt gaatccgggt
      721 gctgaacagt gccaggcggg tagtttgact gggacggtcg cctcccaaaa tgtaacggag
      781 gcgcacaaag gttccctcag tacggttgga aatcgtgcgt agagtgtaaa ggcagtaagg
      841 gagcttgact gcgagactga caggtcaagc aggtgcgaaa gcaggtctta gtgatccggc
      901 ggtagcaagt ggaagtgccg tcgctcaacg gataaaaggt actccgggga taacaggctt
      961 atcgggccca agagtccaca tcgacggccc ggtttggcac ctcgatgtcg gctcgtcgca
     1021 tcctggggct gaagtaggtc ccaagggttg ggctgtt
//
LOCUS       DASQSL010000847         2533 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_167890, whole genome shotgun sequence.
ACCESSION   DASQSL010000847 DASQSL010000000
VERSION     DASQSL010000847.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2533
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167890"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1042
                     /locus_tag="VE844_08655"
     CDS             <1..1042
                     /locus_tag="VE844_08655"
                     /inference="COORDINATES: protein motif:HMM:NF017021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HZC01417.1"
                     /translation="QLDQSQISGNLSMVDFAKPALGFKLVIDRFNADRYLPPAKPDES
                     PRAATPAAAAGAAAQLPLPLLRALKVKGDLNIGKLKIAKARIRNLNLKISAHEGDIKL
                     NPISANLYQGKYSGDIGLDARGEQAILTLTESLTGIHIEPLLTDFRGKEAKLSGVGDV
                     KARLNATGADMEAFKRTLSGTAEFAFRDGALKGVNLGLLIRKAQTGFVGPAEAQVQTD
                     FSTLQGTLNLAKGVIGNNDLQAKSPLLRIEGEGSANLVTEQLDYTLHTTIVATAEGQG
                     GKELENLKGLTVPIRISGTFSDPKYRPDLASIAKARAKKELEKQQERLKSKAEEKLKD
                     KLGKDLFKDILQ"
     gene            1052..2122
                     /gene="mutY"
                     /locus_tag="VE844_08660"
     CDS             1052..2122
                     /gene="mutY"
                     /locus_tag="VE844_08660"
                     /EC_number="3.2.2.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013221021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HZC01418.1"
                     /translation="MDDFSGRVLTWYDRHGRQDLPWQQPATPYRVWISEIMLQQTQVN
                     TVLPYYRRFIERFPDLPTLARASLDEVLHHWSGLGYYARARNLHAAAKKVYSHYGAEF
                     PSDIDRLLKLPGIGRSTAGAILALSSGARHPILDGNVKRVLARYHAIEGWPGRSAVAQ
                     RLWALAETHTPRVRVTHYTQAIMDLGAILCTRTKPRCGECPLQPDCKAYRSGQQAAFP
                     TPGPTKTLPVRHTTCVIMQNPAGEVLLERRPPTGIWGGLWSFPECPAGVDPLKWCQDE
                     LGYRVQAAEHGSALQHTFSHFRLLITPLYVRVQEKAQGVMESRPLVWYKDTDPMPLGL
                     AAPVAKLMKNLKGRSSAEEHIE"
     gene            2119..2400
                     /locus_tag="VE844_08665"
     CDS             2119..2400
                     /locus_tag="VE844_08665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018947159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HZC01419.1"
                     /translation="MTRMVKCVKLDKESEGLAQAPYPGELGRRIYAHVSKEAWQMWLR
                     HQTMLINEYRLTPLDPKTRKFLEQEMEKFFFGEGSAKPAGYVPPQEENI"
BASE COUNT          583 a          755 c          713 g          482 t
ORIGIN      
        1 gcagctcgac caaagccaga tcagcggtaa cctctccatg gttgattttg ctaaacccgc
       61 cctgggattc aagctcgtca tcgatagatt taacgcggac cgttatctgc cgcctgcaaa
      121 accggacgaa tcgcctcgag ctgcgactcc tgcggctgca gccggtgctg cggcacaact
      181 gcccctcccc ctcttgcgtg cgctcaaggt caagggcgac ttgaatatcg gcaagctcaa
      241 gatcgccaag gccaggatcc gcaatctcaa tctcaagatc tccgctcacg agggggatat
      301 caagctgaac cctatctcgg ccaatctcta tcaggggaag tacagcgggg atatcggcct
      361 ggacgcgcgg ggtgaacaag ccattctcac cttaaccgaa tcgcttaccg gtatccacat
      421 cgagcccttg ctcaccgatt tcaggggtaa ggaggccaag ctttccggcg tcggcgatgt
      481 taaagcccgg ctcaatgcca cgggcgctga catggaggcc ttcaagcgga ccttaagcgg
      541 gacagccgag tttgcgtttc gcgatggggc cctgaagggc gtcaatctgg gcttgctcat
      601 ccgcaaggcc caaacaggtt ttgtgggtcc cgccgaagcg caggtccaaa ccgatttcag
      661 taccctccag gggaccttga accttgccaa gggtgtgata ggcaataacg atctgcaggc
      721 caaatcgccc ttgctgcgca tcgaaggcga gggtagtgcc aatctggtga ccgagcagct
      781 cgattacacc ttgcatacca ctattgtcgc caccgccgag ggccagggtg gaaaggaatt
      841 ggagaacctc aaagggctga cggttcctat ccggatcagc ggcaccttct cggatcccaa
      901 atataggccg gatctggcct ctattgccaa agccagggcc aaaaaggaat tagaaaaaca
      961 gcaagaaagg ttaaaatcca aggccgagga aaaactcaag gataagcttg ggaaggatct
     1021 gttcaaggac atcctgcagt agttctgagc aatggacgat ttcagcggcc gtgtacttac
     1081 ctggtacgac cggcacgggc gccaagatct gccctggcaa cagccagcta caccttaccg
     1141 ggtctggatc tccgagatca tgctccaaca gacccaggtc aataccgtgc tcccttacta
     1201 ccgccgattt atcgaacgct ttcccgatct gccaaccctc gcccgggcct cgctcgatga
     1261 ggttctgcat cactggtcgg gactcggcta ctacgcccgc gccaggaatc tgcatgccgc
     1321 agcgaaaaag gtgtacagcc actatggcgc agagttcccg agcgatatcg atcgcctgct
     1381 caaattaccg ggtataggcc gctcgacagc cggtgcgatc ctcgccctct cttcaggagc
     1441 gcgccacccc atcctcgatg gcaatgtcaa gcgcgtgctg gcccgctacc atgccatcga
     1501 gggttggccg ggccgatccg cggtcgcgca gaggctgtgg gcactggctg aaacccatac
     1561 gcccagggtg cgcgtgacgc actataccca agccatcatg gatctcggcg cgatcctgtg
     1621 cacccgcacg aagccacgct gtggcgaatg tcccctgcaa cccgactgca aggcctaccg
     1681 ctcaggacag caagccgcat tcccaacccc aggacccacc aagaccttgc ccgtacgcca
     1741 taccacctgc gtgatcatgc agaatccagc cggtgaggta ttgctcgagc gacggccgcc
     1801 tacggggatc tggggagggc tgtggagctt tccggaatgt cccgccgggg tagatccctt
     1861 gaagtggtgc caggatgagc tcggctatag ggttcaggcg gccgagcacg gatctgccct
     1921 gcaacacacc tttagccatt ttcgtctgct gatcacaccg ctctatgtgc gggttcaaga
     1981 gaaggctcag ggggtgatgg aatcccggcc gctggtctgg tataaagaca ccgatccaat
     2041 gccgcttggg cttgcagcac ctgtggccaa actgatgaag aaccttaagg gcagatcttc
     2101 tgccgaggag cacatcgaat gacgcggatg gtaaagtgtg taaagcttga caaggagagc
     2161 gaggggctcg cgcaagcccc ttatcccggc gaactgggcc gacgcatcta cgcgcatgtc
     2221 tctaaagaag cgtggcagat gtggctccgg catcaaacca tgctgatcaa tgaataccgg
     2281 ctgacgcccc tggatcccaa aacgcgcaag tttctagagc aggaaatgga gaaattcttc
     2341 ttcggcgaag gatcggctaa accggcaggt tatgtgccgc ctcaggaaga aaatatttga
     2401 ccagggattg gcccaggtta cggcttgcgc accaacagga tcacggtgag ttccatcaaa
     2461 atgtggatga aagcctatgg cctttcgcag gcccgcctcg agcgaatctc catgcaaagg
     2521 cactccgaag agg
//
LOCUS       DASQSL010000848         1477 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_6921, whole genome shotgun sequence.
ACCESSION   DASQSL010000848 DASQSL010000000
VERSION     DASQSL010000848.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1477)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1477)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1477
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6921"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1477
                     /locus_tag="VE844_08670"
     rRNA            <1..>1477
                     /locus_tag="VE844_08670"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          385 a          356 c          469 g          267 t
ORIGIN      
        1 actcggctgg ggttactccc agtcactgcc cgctgaattc ataggcgaag cagagcgaac
       61 ccagggaact gaaacatcta agtacctgga ggaaaagaaa gagacatcga ttccgtcagt
      121 agcggcgagc gaaagcggac acagcccaaa ccgggattcg tcccggggtt gaggggcctc
      181 gaggggttac aaaaccgtcg gtagcggaag cgtctggaaa gtcgcaccaa agagggtgaa
      241 agtcccgtat gcgacaccga taggtccccg ttgagaggat tcccagagta gcacgagact
      301 cgtggaatct cgtgtgaagc cgggcggccc accgcccaag gctaaatatt cctcgatgac
      361 cgatagtgga caagtagggc gattgaacga tgaaaagcac agctattagc tgagttaaaa
      421 gtacctgaaa ccatacactt acaagcggtc ggagccctat gcccagcaat gggaatgggt
      481 gacggcgtac cttttgcata atgggccggc gagtgcatgt ttacggcaag gctaaggtgt
      541 caagcaccgg agccgtagcg aaagcgagtc ttaaagtggc gtcaagttgc aggcttgcgg
      601 cccgaaaccc cgtgatctac ccgtggccag gttgcacacc ccgtaaaagg ggtggaagga
      661 ccgaagccgt gaacgttgaa aagttctggc atgacctgtg gggaggagtg aaagtctaat
      721 caaacgggga gatatctggt tctcttcgaa atgcctttag gggcagcctc gagccactac
      781 tctgtggggg tagagctact gaaaggagac gtggggctac ccgcctacac gctcctacca
      841 aactccgaat accacagaga ctatctcggg agtgagtccg cgagggataa tcttcgcggt
      901 caaaagggaa acaacccaga tcgcctgcta aggtcccaaa attcagctta gttcggtagg
      961 aagttattgt tctgagacag ccaggatgtt ggcttagaag cagccaccat ttaaaaagtg
     1021 cgtaatagct tactggtcga gcagagtagc gccgtaaatg atcgggaata agctggatac
     1081 cgaagcagcg agctcgcaag agcggtagat gagcgttgca cgccgcgtcg aagccatacc
     1141 gtgaggagtg gtggagcgcg tgcaagtgag aatgccggta tgagtaacga taatgcaggt
     1201 gaaaatcctg cacgccgaaa gcctaaggtt tcctggggaa ggtaaatccg cccagggtca
     1261 gtcggcccct aacgcgaggc agaaatgcgt agcggatgga cagcgggtta atattcccgc
     1321 accggccacg gaggttgaac ccgtacgtgt agtctctcaa ggcaggtccc ccggttagtc
     1381 gtgggggttg gggcgcgggt aaccgcgcac ctcgaggccg ttttgttgcc gaagcctgcg
     1441 gagcgggggg ccgagaagag tacagagggg acgacgg
//
LOCUS       DASQSL010000849         1252 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_101870, whole genome shotgun sequence.
ACCESSION   DASQSL010000849 DASQSL010000000
VERSION     DASQSL010000849.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101870"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(172..248)
                     /locus_tag="VE844_08675"
     tRNA            complement(172..248)
                     /locus_tag="VE844_08675"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(212..214),aa:Pro,seq:cgg)
     gene            complement(260..1228)
                     /locus_tag="VE844_08680"
     CDS             complement(260..1228)
                     /locus_tag="VE844_08680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009726798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HZC01420.1"
                     /translation="MDIESIRSLIATDMAAVDQLIQQRLHSEVALINQLGHYIINSGG
                     KRLRPMLALLSAHAHSYHGTQHIELAAIIELIHTATLLHDDVVDASYLRRGKETANLL
                     WGSEASVLVGDFLYSRAFQMMVDIRNMRVMEILANTTNTIAEGEVMQLINRHDPDTTE
                     NRYLVIIRSKTAKLFEAAGQLGAVIGGQDPKAEAIMARYGMHLGTAYQFIDDVLDYSA
                     SAQVLGKNIGDDLAEGKPTLPLLYTLWHGNEAQAQLVHRAIQKGGREEIAAVIQAIES
                     TGAIAYTAKRARSEAQCAQQMLEALAPSAYKDALLALADFAVNRAS"
BASE COUNT          287 a          325 c          334 g          306 t
ORIGIN      
        1 atgtagcgtt cggggctagt ttgcaacgga caacattgag tgaaatggct aagccgctat
       61 ataacttaaa gtatatcata tcctacgcag ctacattacg atcttagtca cattcatgag
      121 gaggacaagg acccgttgga taaggtaagt ggctgagcca gcggctggat ttggtcgggg
      181 tgacacgatt tgaacgtgcg acacctgcct cccgaaggca gtgctctacc aggctgagct
      241 acaccccgac ggtgatctct catgaggcgc ggttgacagc aaaatccgcc agcgccagca
      301 aggcgtcttt ataggcggat ggagccagcg cctcgagcat ctgctgagcg cattgggcct
      361 cagatcgtgc gcgtttagca gtgtacgcga tggccccggt cgattcaatg gcttgtatca
      421 ccgccgcgat ctcttcccgc ccgcctttct ggatcgcccg gtggacgagt tgggcttgcg
      481 cttcgttacc atgccagagg gtatagagca gcggcaaggt gggtttacct tccgccagat
      541 cgtcaccgat atttttgccc aatacctgag ctgaagcact gtaatccagc acatcgtcga
      601 tgaactgata agcggtgccc aaatgcatac cataacgagc cataatcgcc tcggcctttg
      661 gatcttggcc gccgatcacc gcgccgagtt ggcctgcggc ttcgaataat tttgccgtct
      721 tactgcggat aatgaccaga tagcggtttt ctgtcgtgtc aggatcatga cgattgataa
      781 gctgcatcac ctcaccttcg gcgatggtat tggtggtatt tgccaggatt tccatcaccc
      841 gcatattgcg gatatccacc atcatctgga aggcccggga ataaagaaaa tcgcccacca
      901 gaacactggc ttcgctgccc cagaggagat tagccgtctc ttttccacgg cgtaagtagg
      961 aggcgtcgac aacatcgtca tggagcagtg tagccgtatg gataagctct ataatggctg
     1021 ccaattcaat atgttgtgtc ccatgatagc tatgggcatg ggcgcttaat aacgccagca
     1081 tagggcgtaa tcgcttaccg ccactgttta taatatagtg accgagttga ttgatcagtg
     1141 cgacctcaga atgcaacctc tgttgaataa gttggtcgac ggctgccatg tcagtcgcga
     1201 tcagtgaccg aatcgattcg atgtccattg cctcactgat gattgttgta cc
//
LOCUS       DASQSL010000850         1755 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_157557, whole genome shotgun sequence.
ACCESSION   DASQSL010000850 DASQSL010000000
VERSION     DASQSL010000850.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1755
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157557"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            82..612
                     /locus_tag="VE844_08685"
     CDS             82..612
                     /locus_tag="VE844_08685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01421.1"
                     /translation="MTAPHPRLRKHLSAPGLLKTIRQSFEAIADHRHQRSQISLADAL
                     MAGLAVFGLKYPLLLKFDEAYRDGVIRHNLKTLYGVERAPCDTQLCTILDAVDPHPLR
                     SAFRAVHGHLQRGKAVEAYQYLDGHYLLSLDGTGQFASSAIRCAECCVKTSHGQESYY
                     HQLLGAVLVHPELPTV"
     gene            694..1404
                     /locus_tag="VE844_08690"
     CDS             694..1404
                     /locus_tag="VE844_08690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01422.1"
                     /translation="MQLRHEFPRLKLIVVEDSLAANGPHLELLHELDLGYLIGVKEGD
                     PEALLAGVRTKLQAGEGTEFSSTDAHGIEPGYRFVNDLPLNHTHPQLRVNFLEYWENK
                     GESQLQLSWITDIELSQDTVERIMRGGRARWKIENETFNTLKNQGYNLEHNYGHGQQH
                     LATVLGFLMMLAFLVDQVQELGCRLWQAARAHFRSRTSLWERLRVLFTGFYIPDWKTL
                     WEAVATGHVPTVLAPDSS"
BASE COUNT          381 a          483 c          540 g          351 t
ORIGIN      
        1 cgaaaagcag agagcttttc gtaaagatag cgaagcgggt aagctatagg caagtcgatc
       61 aagccccgag gaccaaagtt gatgactgca ccgcatccgc gcttacgcaa gcacctctcc
      121 gcacccggtt tgctgaagac gatccggcag agttttgagg cgattgcgga tcatcgccat
      181 cagcgcagtc aaatctcgct ggccgatgcg ctgatggcag gtttggcggt atttggattg
      241 aagtatccgt tgctgctgaa gtttgatgag gcgtatcgcg acggcgtgat ccgccataac
      301 ctcaagacgc tgtatggggt cgagcgggcg ccgtgtgaca cgcaactgtg caccatcctc
      361 gatgcggttg acccgcaccc actccgctcg gcatttcggg ctgtgcatgg gcatctgcag
      421 cggggcaaag cagtggaagc ttatcaatat ctggacggtc attatctgct gtcgctcgat
      481 ggcacgggtc agtttgcctc cagtgcgatc cgctgcgcgg agtgctgtgt caagactagc
      541 cacggtcaag agagctacta tcatcaactg ctgggggcgg tgctggtaca tccagagctg
      601 cccacggtgt agccgctggc ccccgaggcg atcacccggc aagacggggc gacgaaaaac
      661 gactgcgaac gcaacaccgc caaacggcta ttggtgcaac tacggcacga atttccaagg
      721 ctcaagctga ttgtggttga agacagtctc gccgccaacg ggccgcacct ggaattactc
      781 cacgagttgg atctaggtta cctcattggc gtcaaagaag gtgaccctga agcgctgttg
      841 gcgggggtac gaacgaaact ccaagccggt gagggcaccg agttcagctc caccgatgcc
      901 cacggcatcg agccgggcta tcggtttgtc aacgacctgc cattgaacca cacccacccg
      961 cagctgcggg tcaacttcct ggagtactgg gaaaacaagg gcgagagcca attacagttg
     1021 agctggatta ccgacatcga gctgagccaa gacactgttg agcgcatcat gcgcggaggg
     1081 cgtgcacgct ggaaaattga gaacgagacc ttcaatacgc tcaagaacca aggctataac
     1141 ctagagcaca actacggcca cggccagcag cacctggcca cggtgttggg ctttctgatg
     1201 atgctggcct ttttagtgga tcaggtacaa gagctgggct gccggctatg gcaggcggcg
     1261 cgggcgcatt ttcgctcgcg tacctccctg tgggaacggc tgcgggtact gtttaccggc
     1321 ttctatatcc cggactggaa aacgctctgg gaggcggtcg ccacaggcca tgtgccgacg
     1381 gtgctggcac cggatagttc gtagtcgaag gtcatagcgt gcgggcggtg tgatcggagt
     1441 tcttgagcgg agcgtatcga cttatcagga gtatgatcag cccgttaaca cgagctcagg
     1501 ggtatgtttg tctatgcgtt ttcgcgcacc cgatcagccc gcgtgatcgg cggtaaatag
     1561 ctcagagcgg gaattgctgg tgatgtgcga tcccttgccg ggcagctacc agacccggcc
     1621 ggtgctgctc gccgaagtgc cctccgacag cagcgtcagg cgcgatcgga tggacaagca
     1681 tagcgcctac accgcgctgg agtcattaga agtctatctg atcctctcgc agcaagaggc
     1741 gctagtcgag gtcta
//
LOCUS       DASQSL010000851         1113 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_183945, whole genome shotgun sequence.
ACCESSION   DASQSL010000851 DASQSL010000000
VERSION     DASQSL010000851.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183945"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..228)
                     /locus_tag="VE844_08695"
     CDS             complement(<1..228)
                     /locus_tag="VE844_08695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2637 domain-containing protein"
                     /protein_id="HZC01423.1"
                     /translation="MRPEEREPERMHDRHEWLREQAEQRLREHADQAHEQREDLRERT
                     EEPHEHLNRPHEQIKRARELQEKVRERLEESR"
     gene            complement(898..>1113)
                     /locus_tag="VE844_08700"
     CDS             complement(898..>1113)
                     /locus_tag="VE844_08700"
                     /inference="COORDINATES: protein motif:HMM:NF025304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC01424.1"
                     /translation="YGVEVSTITQLLRGVTWREPTVRRPARPKALSDEEVVEIKRLRR
                     SSGLSMERIGFIVGVSAATVHKVLKSP"
BASE COUNT          197 a          343 c          299 g          274 t
ORIGIN      
        1 gcgggattct tctaaccgct cgcgcacctt ttcctgcaat tcgcgtgccc gcttaatctg
       61 ttcgtgtggt cggttcaggt gctcgtgtgg ttcctccgtg cgctcgcgca aatcctcccg
      121 ctgctcgtgc gcttggtctg cgtgctcacg taaccgctgc tccgcctgtt cgcgtaacca
      181 ctcgtgtcgg tcgtgcatcc gttcaggctc tcgctcttca ggcctcatac accttactcg
      241 cttctatttt cggagcatcg gttttcttcc cttatcccca aggggaatca taccagcgag
      301 ccccggtttc atgcagccgt cgcggcaata agagcccgcg cctatagggg ggcgggttgc
      361 cctcgatgtg aatcgggagg aatttcctcc ggcttagcag aggccgctag gccatcctat
      421 gcccaggctg ttccatcttc gatcccgctc ttcacgtcta caagagatcg cgttagggcg
      481 gcgtcaagac cctgcaaagt agtaaggggc gggtcgacga gaaacctctc gtagccttct
      541 tgcgccactt cgtcacacag cgcaagcagt cggtctgcat tatcgtctcc gtctatgctc
      601 cagtcgtttc gggatatacc ctggctcatc cacggctttt ctaggccttc cgctggcacc
      661 cagtggtaca aaaattctct tgcgtactcc ctagagcgga aaaagcagaa caggtgtacg
      721 cccggtagcg gaggagaagg taacggcatg tactcaacac gtttgtgttg aaaccaatac
      781 agtggcggcc ggcgtctgtc gtcttgttga gtcattcccc gaacagcctc ctaaagagcc
      841 ccttgcctcg cttggactct agcttaccaa agagcttgcg tctacagggg gcgggtccta
      901 tggggacttg agaactttat gaaccgtggc tgccgagacg cccacgataa accctatccg
      961 ttccatgctc agcccggaag aacgtcgaag gcgtttgatc tccacgacct cttcgtcgct
     1021 tagcgcctta ggccgtgctg gtctgcgtac tgtgggctcc ctccaggtaa cgccccggag
     1081 gagttgggtt atggtgctca cctcgacgcc gta
//
LOCUS       DASQSL010000852         1106 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_143898, whole genome shotgun sequence.
ACCESSION   DASQSL010000852 DASQSL010000000
VERSION     DASQSL010000852.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143898"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(129..>1106)
                     /locus_tag="VE844_08705"
     CDS             complement(129..>1106)
                     /locus_tag="VE844_08705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003398501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HZC01425.1"
                     /translation="MYLGSPRMAEMVIGEKTTLEDMGGARMHCEVSGCGDVLVQSDEE
                     AIDFARRYLQYFPAHCDSQPEVVATVEPLKDPEALGRTIPTNQNVPFDMYELIAHLVD
                     AHSFLELKALFAKELITGLARIGGRVVGLIANQPQVKGGVLFVDSADKGTRFITLCDA
                     FNIPLLFLADVPGFMIGSKVERQGIIRHGAKMLYAVSEATVPKISVIVRKVYGAGLYA
                     MCGPAYGTDATLALPTAYIAVMGPEAAVNAVYYNKIAELQGEEREHFVRERREEYRRD
                     IDIYKLASHLIVDAIVPPSRLREELITRFAAYASKHVTAPRKRHGVMPV"
BASE COUNT          241 a          315 c          309 g          241 t
ORIGIN      
        1 tgaatgtccg aggttggttg tattcgcaga gaggaatggc acggcgatct tcgcgggacg
       61 tatgctgtcg ggcatttgag cgttgcccac cccgggccct ttcacatcgg tacagaggag
      121 gatgccgatt agacgggcat cacgccatgg cgcttccgcg gagccgtgac atgcttggac
      181 gcgtatgccg caaagcgggt gatgagttcc tctcgcaatc gtgatggggg gacgatggca
      241 tcgacaatca ggtgtgacgc gagcttatag atatcgatat cgcggcgata ttcttcgcgc
      301 cgctcgcgga cgaaatgctc ccgctcctcg ccttgtaatt cggcgatctt attgtaatac
      361 acggcgttca cggcggcttc gggtcccatg accgcgatat aggctgtcgg cagtgccagc
      421 gttgcatccg tgccataggc aggcccacac atcgcgtaga ggcccgctcc atacacttta
      481 cgtacgatga cggagatctt cggaacggtc gcttcggaga ccgcgtacag cattttcgcc
      541 ccatggcgaa tgataccttg gcgttccact ttgctgccga tcataaaccc tggcacatcg
      601 gcgagaaata gcaacggaat attgaaggca tcgcagaggg taatgaaccg cgtgccctta
      661 tccgccgagt caacaaacag tactcccccc ttcacttgcg gctggttagc tatgaggccc
      721 actacgcgtc cgccaatacg cgccaatcca gtgatcagct cctttgcaaa gagggctttc
      781 agctccaaga aggaatgggc atcgaccagg tgtgcaatga gttcatacat atcgaacggc
      841 acattctgat tggtcggaat ggtacggccc aaggcttctg ggtctttgag aggctcaacc
      901 gtggcgacaa cctcaggctg gctgtcgcag tgagctggaa aatattgtag gtagcgcctg
      961 gcaaaatcga tagcttcctc atcactttgc actaagacat ccccgcaccc cgacacctcg
     1021 caatgcatgc gagcgccacc catatcctcc aaggtggtct tctcgccgat gaccatttcg
     1081 gccatgcgcg gtgagccgag atacat
//
LOCUS       DASQSL010000853         1634 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_143900, whole genome shotgun sequence.
ACCESSION   DASQSL010000853 DASQSL010000000
VERSION     DASQSL010000853.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1634
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143900"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            155..724
                     /locus_tag="VE844_08710"
     CDS             155..724
                     /locus_tag="VE844_08710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019503413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC01426.1"
                     /translation="MTLPGEAMMPGPKPLSVILSEKQRALLERLKRRQTSLQRLVRRV
                     DTILAAADGENNESIAHQLGLNRTTVWTWRQRWRDGAEALDAAEAAGDADQALLARIE
                     AMLDDAPRSGSPGSFSAEQLAQIISVACESPEDCGRPVTPWTPRELADEVIKRDIVPS
                     ISPRTVGRFLKGGRSQATSLDLLAQSSTR"
     gene            750..1430
                     /locus_tag="VE844_08715"
     CDS             750..1430
                     /locus_tag="VE844_08715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004067244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01427.1"
                     /translation="MHEVCETYRQAPERHEHGIHTVSVDEKTGMQALERLHPTRQMKR
                     GLVEREEYDYERHGTLTLIANFEVPTGRVIAPSLGATRTEADFARHLATTLDTDPEGQ
                     WIFVADQLNIHKSESVVRLIAERCELEVELGVKGQSGILKSMASRAAFLQQADHRIRF
                     VYTPKHTSWLNQVEIWFSILARRLLKRASFTSIDDLRERVLAFIEYFHATLAKPFKWT
                     YKGRPLVA"
BASE COUNT          345 a          460 c          493 g          336 t
ORIGIN      
        1 tcaaagacgt gtgccaaaaa aaatgggtcg tctacgccaa ggcccccttt ggctcggccg
       61 agcagaccct caactaccta gtacagcctg gcaaaagttc atcaacggtt tgaatggtgt
      121 tatacatgga agcgagagac aagtagacca tccgatgact ttgccaggag aggcgatgat
      181 gcccggtcca aagccacttt ctgtgatctt gagtgagaaa cagcgggcgc tcttagagcg
      241 cctgaagcgt cgccagacga gcctgcaacg gctcgtgcgt cgggtcgaca caattttggc
      301 tgcggctgat ggggaaaata atgagtcgat tgcccatcag ctcggcctca accgcaccac
      361 cgtatggacg tggcggcagc gctggcgaga cggggccgag gcactcgatg cggccgaagc
      421 ggccggcgat gcggatcagg ctctgctggc ccggatcgaa gcgatgctgg atgatgcccc
      481 ccgctctggt tcgccgggga gcttcagcgc ggaacagctt gcccagatca tctcggtggc
      541 ctgtgaatcg cccgaagatt gcggtcgtcc cgtgacccct tggacccctc gagagctcgc
      601 cgatgaggtc atcaaacggg acattgtccc gagtatttcg ccccgcaccg tggggcgttt
      661 tttaaaagga ggccgatctc aagccacatc gctcgatcta ctggctcaat catcaacgcg
      721 atgaggaccc cgacgccttt gatgcggcgg tgcatgaggt gtgcgaaacg tatcgtcaag
      781 ccccagagcg ccatgagcac ggcatccaca ccgtcagtgt ggatgaaaag accggaatgc
      841 aagccttaga gcgtctgcac ccgacgcgcc agatgaaacg gggtctggtg gagcgtgagg
      901 aatatgacta tgagcggcac ggcaccctga cgttgatcgc caatttcgag gtgcccacgg
      961 gccgcgtgat cgccccgagc ttgggtgcga cccgcacgga agcagatttt gcccggcatc
     1021 tggcgacgac gctcgacacg gaccccgagg gtcagtggat tttcgtcgcc gaccagctca
     1081 acattcataa gtcggagtcg gtggtccgct tgattgccga gcgctgtgag ctcgaggtgg
     1141 agttaggggt gaagggccaa agtggcattt tgaagtcgat ggcgtcgcgt gcggcgtttc
     1201 tccaacaggc cgatcatcgg attcggtttg tgtacacgcc caagcacacc tcgtggctca
     1261 atcaagtgga gatttggttt agcatcttgg cgcgtcggtt gttgaaacgg gccagtttta
     1321 cctccatcga tgacctccga gagcgggtgc tggccttcat tgagtatttc catgccaccc
     1381 tggccaagcc ttttaaatgg acctataagg ggcgtccact cgtcgcctaa ccgataagga
     1441 atttctgcca ggctgtacta ggcaaagtag gatctccacc ggcgtccact cgttgccttc
     1501 tgtttgacgg caagcgcttt gcccaggatg tcaacggcgt gatataaacc ttcggcgtat
     1561 tgttcagcct gcaacaaagg cacgacatgc cgctggagaa tctgcaggga ctcctcgtcg
     1621 ctcagcaggc tttc
//
LOCUS       DASQSL010000854         1205 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_101891, whole genome shotgun sequence.
ACCESSION   DASQSL010000854 DASQSL010000000
VERSION     DASQSL010000854.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101891"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..987)
                     /locus_tag="VE844_08720"
     CDS             complement(<1..987)
                     /locus_tag="VE844_08720"
                     /inference="COORDINATES: protein motif:HMM:NF033559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC01428.1"
                     /translation="MEKVCVERLDHLGVLASVIKDLGLMDMINARLVPDPQEVLTPGE
                     AVAGMILNGLGFANRPLSLTPQFFASKPLDLLFHDGIRAEMFNRFKLGRTLDEAYAYG
                     CDLLFHELALGVCARDSIDLRFNHLDTTSFALSGEYIPESDEQAVTITHGYSRDHRPD
                     LKQVVLELMVSQDGGVPFVSKSWDGNTSDSEIFQARAQALLTAFQNAPHPRYLIADSK
                     LYHKDNAVHLRHLSFITRIPHTIRPVSEAITQALALDSWARLDENTRYQRLELCHYGM
                     AQRWLVVYSQAALERADATLNKARHREDEMIHKQLFHLQAKRFATPEVAQEAL"
BASE COUNT          270 a          315 c          350 g          270 t
ORIGIN      
        1 gagcgcctct tgggccacct caggcgttgc gaagcgtttg gcttgtaagt gaaagagttg
       61 cttgtggatc atctcatctt cgcggtgtct ggccttattg agcgtggcat cggcacgctc
      121 cagggcggcc tgggaataca ccaccagcca ccgctgggcc ataccatagt ggcacagctc
      181 aagacgctga tagcgggtgt tctcatcgag acgagcccag ctatccaacg ccagggcttg
      241 ggtgatcgcc tctgagaccg ggcgaatcgt gtgaggaatg cgcgtgataa agctgaggtg
      301 gcggaggtgg acggcgttgt ctttgtggta cagtttcgag tctgcgatca gataccgtgg
      361 gtggggggca ttctgaaagg cggtcagcaa cgcctgggcg cgcgcctgga aaatctcact
      421 gtctgaggta ttgccgtccc aactcttact cacaaagggg actccgccat cttgggagac
      481 catcagttcc aaaaccacct gcttcaagtc cggccggtga tctcgggagt agccgtgggt
      541 gatggtaacg gcctgctcat cgctttccgg gatgtactcc ccactgagtg caaagctggt
      601 ggtgtcaaga tggttaaagc gcaggtcgat gctgtctcga gcgcacacgc ccagggccag
      661 ttcatgaaac agcaggtcgc agccataggc ataggcctca tcgagcgtgc ggccgagctt
      721 gaaacgattg aacatctcag cccgaatgcc gtcatgaaat aacagatcga ggggtttgct
      781 ggcaaaaaac tgtggggtca acgacaaggg ccgattggca aatccgagac cattcagaat
      841 cattccggcc acagcttcgc ccggcgtgag cacttcttgt ggatcgggca cgaggcgagc
      901 gttaatcatg tccattaagc ccaagtcttt gatgacagac gcgagcacgc ctaagtggtc
      961 gaggcgttca acacaaactt tttccattgg tgaatcctcc cctgaagccc atagatgtgg
     1021 ccaagctgtc aggagaggat aaacggtttt ctctcgttga gcacctgctc aatgtcggtt
     1081 atagttcaac aacttcgcga ttttgactct gtttcgggct taacttcatg ccatttggcc
     1141 aagagccata aactgttcaa atccgtatag aaggttcgcg gatactccag tcagacaacc
     1201 ctgag
//
LOCUS       DASQSL010000855         2720 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_31402, whole genome shotgun sequence.
ACCESSION   DASQSL010000855 DASQSL010000000
VERSION     DASQSL010000855.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2720
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31402"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..584)
                     /locus_tag="VE844_08725"
     CDS             complement(<1..584)
                     /locus_tag="VE844_08725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014704383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HZC01429.1"
                     /translation="MLDKIVIANRGEIALRILRACREMGIKTVAVHSTADRDLKHVRL
                     ADESVCIGPPPAAESYLNAAAIISAAEVTDAVGIHPGYGFLAENADFAERVEKSGFIF
                     IGPRPETIRLMGDKISAIRAMKQAGIPCVPGSGNSLSDNLEDNLRIARDIGYPVIIKA
                     AGGGGGRGMREVHSEAALSNAISLMRTEAQAAFG"
     gene            complement(615..1067)
                     /gene="accB"
                     /locus_tag="VE844_08730"
     CDS             complement(615..1067)
                     /gene="accB"
                     /locus_tag="VE844_08730"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011262775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HZC01430.1"
                     /translation="MDIQKLKELIELLKESGIAEIEIREGEQSIRVSRYAGPVQTLMQ
                     VPEPTSLSLESPARGVTAAQEPKSEAEGHKILAPMVGTFYAAPSPTSPPFARIGQTVK
                     RGDIVCIIEAMKVMNQIESDVDGVVTALLVENGHPVEYGQPLLIVKRP"
     gene            complement(1084..1527)
                     /gene="aroQ"
                     /locus_tag="VE844_08735"
     CDS             complement(1084..1527)
                     /gene="aroQ"
                     /locus_tag="VE844_08735"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019623221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HZC01431.1"
                     /translation="MAKLLLLNGPNLNLLGEREPERYGTTTLSEIEARLIALAKASGH
                     TLTCFQSNAEHALIERIQSAQGEGIAFILFNPAAFTHTSIALRDALAAVNIPFIEIHL
                     SNIYARESFRHHSYLSELAVGVISGLGAEGYELALSAALRRLERL"
     gene            complement(1589..2146)
                     /locus_tag="VE844_08740"
     CDS             complement(1589..2146)
                     /locus_tag="VE844_08740"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HZC01432.1"
                     /translation="MKRTYFIGAGVLVALLAGLGGFLLHATLRSSATEAALSGEEVVE
                     AHSMVGRLRPEFILADLAGAPRRVTEWDGQVLIINFWATWCPPCRKEMPMLIGLQEQY
                     GRAGVQLVGIALDEPGSVQAYSEAMGINYPILIGDSGTIVSSYGNDLGALPYTVIIGR
                     DSKIALVKLGELSREETEKAIRALL"
     gene            complement(2143..>2720)
                     /locus_tag="VE844_08745"
     CDS             complement(2143..>2720)
                     /locus_tag="VE844_08745"
                     /inference="COORDINATES: protein motif:HMM:NF024498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HZC01433.1"
                     /translation="LLIICAIYMGALDTLERVVSGGRRLAKGLGLAVLTYGVLLIVGA
                     VSGANDIFRPLGNIALMTRGGSPALRGPEFKPVKGVEGLKRALIEAQGKPVMLDFYAE
                     WCVECKQMEQHTFADADVQQALAGMVLLKADVTANDKEDRALLKTLGLYGPPATLFFG
                     AEGSERRGQRLVGFMGAGEFRAHLETVLRRS"
BASE COUNT          595 a          844 c          714 g          567 t
ORIGIN      
        1 ttgccaaagg ccgcttgcgc ctcggtgcgc attagactga tcgcattcga caatgccgct
       61 tcactgtgca cttcgcgcat cccgcgcccg ccgccaccgc ccgcggcctt gatgatcacc
      121 gggtaaccga tatcccgtgc gatccgtagg ttgtcctcga gattgtcgct caaagaattt
      181 ccggatcccg gcacgcaggg gatcccagcc tgcttcatgg cgcggatggc ggaaatctta
      241 tcccccatca ggcggatcgt ctcaggtctt ggaccgatga atataaaccc acttttctcg
      301 acacgctctg caaaatcagc attctccgcg agaaatccat agccgggatg gatcccgacc
      361 gcatctgtga cctcggcggc gctgatgatc gcagcggcgt tcaagtaact ttcagccgcg
      421 ggcggtggcc caatgcacac cgattcatcg gccagccgga cgtgcttgag atcccggtcc
      481 gcggtcgaat gcacggcaac cgtcttgatc cccatctcgc ggcaggcgcg caggatcctg
      541 agcgcgatct ccccgcggtt ggcaatcaca atcttgtcaa gcatggtccc gctctcccaa
      601 ggagtttcaa gcaatcacgg acgcttgacg atcaacaagg gttggccata ttccacgggg
      661 tgcccgtttt ccaccaggag ggcagtgacc acaccatcga catccgattc gatctggttc
      721 atgaccttca tggcctcgat aatgcacacg atatccccac gcttgacggt ttggccgatg
      781 cgggcaaaag gggggctcgt cggtgagggg gcggcataaa aggtccccac catcggtgct
      841 aagatcttat ggccttccgc ttcagatttc ggctcttggg ctgccgtgac cccacgcgct
      901 ggcgactcga ggctcaggga ggtgggttct ggcacctgca tcagggtttg caccggccct
      961 gcatagcggc tgacgcgaat ggattgttca ccctcacgga tctcgatctc agcaatgcct
     1021 gattctttta gaagctctat cagttctttt agtttttgaa tatccattgc ggaacagttt
     1081 gttctaaagc ctttctaagc gccgtagcgc agcactcaat gccagctcat acccctctgc
     1141 tcccaggccg ctgatcacac ccaccgcgag ctcggacaaa taagagtggt gacgaaaaga
     1201 ctcgcgcgca tagatattgg agaggtgtat ctcgataaag gggatattaa cggcggcgag
     1261 tgcatcacgg agcgcaatgc tggtatgggt aaacgccgcc ggattaaaga ggataaaggc
     1321 aatgccctca ccttgtgcgc tctggatccg ttcgatcagc gcatgctcgg cattgctctg
     1381 gaaacaggta agggtatggc ccgaggcctt tgcaagtgca atcaaacggg cctcgatctc
     1441 ggagagtgtg gtggtaccgt agcgttcagg ctcacgctcc cccaatagat tcagattcgg
     1501 gccgttcaac agcaacagct tcgccatcgg cgctagaaga ctccctcgta ctcagaataa
     1561 gccaagaata caatagaact acaaacaatc acaacaacgc acggatggct ttttctgtct
     1621 cttcgcggga gagttcaccg agctttacca aggcgatctt actgtcgcgg ccgatgatga
     1681 cggtataggg gagcgcccca aggtcattac cataactgct gacgatggtg ccgctgtcgc
     1741 cgatcaagat cggatagttt atccccattg cttcactata cgcctggacg ctgcccggct
     1801 catccagggc aatacctaca agttgcacgc ctgccctgcc gtactgctct tgtaacccga
     1861 tgagcatcgg catctcttta cggcagggag gacaccaggt cgcccaaaag ttgatgatca
     1921 atacctggcc gtcccactcg gtaaccctgc gcggggcgcc cgccagatcc gccagaataa
     1981 actcgggacg cagccgcccg accatggaat gcgcctcgac gacctcctcc ccgctgagcg
     2041 ctgcctcggt cgccgaggag cgcagggtgg cgtgtaaaag gaaaccaccg agccctgcta
     2101 atagggctac caacacccct gcgccaatga agtaggttcg tttcaagatc ttctcaacac
     2161 ggtctcaaga tgtgcgcgaa attctcccgc ccccatgaac cccaccaaac gctggccacg
     2221 gcgctcactg ccttctgcgc cgaaaaacag cgtagcgggc ggcccataga gccccagcgt
     2281 tttcaataac gctcggtctt ctttatcgtt ggccgttacg tcggccttaa gcagaaccat
     2341 gccagcgagc gcttgctgca catcggcatc ggcaaaggtg tgttgctcca tctgcttgca
     2401 ttcgacacac cactcagcat agaaatcgag catcaccggt ttgccttgtg cctctataag
     2461 cgctcgcttg agaccctcaa cacctttcac cggtttaaat tctggacccc gtagcgcggg
     2521 cgaccctcct cgcgtcatca aggctatatt gcccaagggg cgaaagatat cattggcccc
     2581 actcaccgca ccgacgatga ggaggacgcc ataggttaac accgcaagcc ccaagccttt
     2641 tgctagccgc cgcccacccg aaaccacccg ctccaaggta tccagggccc ccatgtagat
     2701 ggcgcagatg atgagtaaca
//
LOCUS       DASQSL010000856         2655 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_167916, whole genome shotgun sequence.
ACCESSION   DASQSL010000856 DASQSL010000000
VERSION     DASQSL010000856.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2655
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167916"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..710)
                     /locus_tag="VE844_08750"
     CDS             complement(<1..710)
                     /locus_tag="VE844_08750"
                     /inference="COORDINATES: protein motif:HMM:NF016251.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HZC01434.1"
                     /translation="MRIYLPSIHTFSRLVIAALILSSVGACAPLSLTREDRVLEGRAT
                     HAQARMRAGDFIGAASEYLRLAQASRTPASHKYVLHAAEAYLAGRRADEAKRLLIRLQ
                     IPADEVDLNSWKKLLWTRVALLKNDPREALATLDTLRGVKVPTSFRKAFHHYRAEAYS
                     IMGDLLKVAHEHILLHALLTDPNEQRKNQHAIWEAVNSLKLATLSRRLPAELNTLRGW
                     MELAIIIKSPHPDSIAFK"
     gene            746..1615
                     /gene="rsmI"
                     /locus_tag="VE844_08755"
     CDS             746..1615
                     /gene="rsmI"
                     /locus_tag="VE844_08755"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016253866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HZC01435.1"
                     /translation="MDPGVLYIVATPIGNLQDLSPRAIEVLRNVDLILTEDTRTSRHL
                     LHAFGIPTPLRAYHDHNERRIYPAIIARLQAGENIALISDAGTPLISDPGYRLVRAAH
                     EAGLRLISVPGPCAVTAALAVAGLACDRFTYEGFLPAKTAARRHRLEQLSQEQRTMVF
                     FESPHRLIDSLMDLQAVFGAERRATVARELTKVHETIYSDTLQYILQWLQRDENQRKG
                     ECVIVVEGQNKPAKAPDLEAQRLLSVLLKYLPPSQAVAAASEFLGGARNKLYRLALEL
                     SGKRTIEEAGGTS"
     gene            complement(1612..2310)
                     /gene="mtgA"
                     /locus_tag="VE844_08760"
     CDS             complement(1612..2310)
                     /gene="mtgA"
                     /locus_tag="VE844_08760"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007872810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009274 - peptidoglycan-based cell wall
                     [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HZC01436.1"
                     /translation="MGRRRSSIALLRRVVLGVVLMTIGAVLYLRWFPPPTTAFMLRST
                     LIAAREGRTGYRLHYRWLEWERISPHAGLAVIAAEDQGFLEHFGFDFNAITHAWKENK
                     TNGPRRGGSTISQQVAKNLFLWPGKSYLRKGLEAYFTLLIEILWPKRRVLEIYLNIAE
                     FGEGIFGIAAASQRFFGKPPLALTSAEAALLAAVLPNPRQLRVDQPSRYLKARRQWIL
                     KQMRQLGGTLAKLR"
BASE COUNT          619 a          688 c          758 g          590 t
ORIGIN      
        1 tgcttgaagg caatggagtc cgggtgcggt gatttgatga tgatggcaag ttccatccag
       61 ccgcgcaggg tattcaactc ggcgggcagg cggcgcgaga gggtagcgag tttgagacta
      121 ttaacggctt cccagatcgc gtgctgattt ttccgctgct catttggatc ggtaagcaga
      181 gcgtgtagca agatatgttc gtgggccacc ttcaaaagat cgcccatgat gctataagcc
      241 tccgcacgat agtgatggaa tgcctttctg aaggaggtag gaaccttgac accgcggagc
      301 gtatctaagg tggctagcgc ctcgcgggga tcgttcttca gcaaggcgac acgggtccag
      361 agcagctttt tccagctgtt tagatccact tcatcggccg ggatctgcag cctgatcaga
      421 agccgtttag cctcatcggc gcggcggcct gctagatagg cttcggcggc gtgtaaaaca
      481 tacttatggc tcgcgggcgt tcgggacgct tgggccaggc gtaggtactc gctggctgcg
      541 cctatgaaat ctcccgcccg catccgggct tgggcgtgtg tagcccggcc ttcgagcacg
      601 cgatcctcgc gggttaagga cagcggtgcg caggccccca cgctagagag gatcagcgcg
      661 gcgatgacta atcggctaaa ggtatggata ctgggaaggt agattcgcat agcaaacagt
      721 atctaaaggg attcgaaagg tgtcaatcga cccgggcgtt ttatatatag tggccacgcc
      781 tattggtaat ctccaggatc tgagtccgcg tgccatagag gtattgcgta acgtggatct
      841 tatcttgacg gaggataccc gcaccagccg ccatctcctg cacgcattcg gcataccgac
      901 accgctcaga gcctatcacg atcataatga gcgccggatc tacccggcca tcatcgcccg
      961 tcttcaagcc ggtgaaaaca tcgcattgat ctcggatgca gggacaccgc ttatcagtga
     1021 tccggggtac cgtctggtca gggctgccca cgaggccggt ctacggctta tttcggtgcc
     1081 gggtccctgt gcggtgacgg ctgccctggc cgtagccggc ttagcctgcg atcgcttcac
     1141 ctacgaggga tttctcccgg ctaaaaccgc cgcacgccgc caccgtctcg aacagttgag
     1201 tcaagaacaa aggaccatgg tcttttttga gtcgcctcac cggcttatcg acagccttat
     1261 ggacctgcaa gccgtcttcg gggccgagcg cagggcaacg gtggcgcgcg agcttaccaa
     1321 ggttcatgag accatctact cagataccct acagtatatc ctgcagtggt tacagaggga
     1381 tgagaatcaa cgcaaggggg aatgtgtgat cgtggtcgaa gggcagaata aacctgcaaa
     1441 ggcgcccgat cttgaggccc aacgcttact ctcggtgctg ttgaagtatt tgcccccaag
     1501 tcaagccgtg gcagcggcga gtgagttctt aggtggagcg agaaataaac tctatcggct
     1561 ggctttggaa ctaagcggta aacgcacgat agaagaagcg ggaggcacct cttaacgcag
     1621 ctttgcgagc gtgccaccga gctgtctcat ctgcttgagg atccattgac gccgagcctt
     1681 tagatagcgt gagggttggt ccacacgcaa ttgcctcggg ttagggagga cagcagcgag
     1741 aagcgccgcc tcggcggatg taagcgccag gggtggtttg ccaaaaaagc gttggctggc
     1801 ggcggctata ccgaagatac cttcaccaaa ctcggcgata ttgagataga tctcgaggac
     1861 cctccgcttt ggccatagga tctcgataag cagggtaaaa taggcctcca atccttttct
     1921 gagatagctt ttccctggcc agagaaagag gtttttggcg acctgctggg agatcgtgct
     1981 acccccgcgc cgtgggccat tggtcttgtt ctccttccag gcgtgggtga tggcattgaa
     2041 atcaaatcca aagtgttcga gaaatccttg atcctctgcc gcgataacag caagccctgc
     2101 atgcggtgag atccgctccc attccagcca gcggtagtgc agacggtagc cagtgcggcc
     2161 ttcccgggca gcgataagtg tacttcttag cataaaggcc gtggtaggcg gtggaaacca
     2221 gcgtaggtac agtacggccc cgatggtcat cagcaccacg cccaaaacta ctctccgcaa
     2281 taacgctatg ctagacctcc tccttccgat aagcacattg taagcgcctg aaattcatag
     2341 gaataagctg aaaacagtca agatcccgcc gatccgaagc ggcttgcatg gatgccggtt
     2401 ctatctatta atcttaaata aagttataga gttacttaaa taattctaaa tagtatcaga
     2461 atcgctttat tggaatagat attgctttgc cagcagacca ggtagaacaa caacacgaac
     2521 agcgctttgt gcagtaagtg gattcaagtc agggagataa atttaagcat gaataaggtg
     2581 gcggttctta aaacagcagt ttcctcggat aatgatagag cggaactgat ccaacggcat
     2641 atccccttgg ttaag
//
LOCUS       DASQSL010000857         4022 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_143948, whole genome shotgun sequence.
ACCESSION   DASQSL010000857 DASQSL010000000
VERSION     DASQSL010000857.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4022
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143948"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1275)
                     /locus_tag="VE844_08765"
     CDS             complement(<1..1275)
                     /locus_tag="VE844_08765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014435093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HZC01437.1"
                     /translation="MNTPEWATRPPDVIFNQPPPLQDYNLFEHDTPLREALQREGGGW
                     IEPQAQVFGALLGKAETLRLGELANRYLPVLHTHDRFGHRIDEVEFHPAWHELMRIGI
                     GHNTHALPWIHPRSGAHVARAALGMLRHQVDEGTSCPLTMSFAVIPSLRLQPELAVEW
                     EPRVRSSEYDPRFIPAAHKRGALFGMAMTEPQGGSDVRANTSQARSLGTGGPGAEYAI
                     IGHKWFCSAPMCDAFLVLAQAQGGLSCFLLPRWKPDGTRNGFHILRLKDKLGNRSNAS
                     SEVEMRGAWARLLGEEGRGVAAIMEMGRHTRLDCAWASAATIRRAVAEATHHAAYRCA
                     FGKRLIEQPLMKNVLADLCLESEAATALALRLARGFDESATDEGQRRFTRIATAIGKY
                     WITKRAIAVVAEALECTGGNGYVEESPLPRLYR"
     gene            complement(1297..1893)
                     /gene="rnhB"
                     /locus_tag="VE844_08770"
     CDS             complement(1297..1893)
                     /gene="rnhB"
                     /locus_tag="VE844_08770"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002683100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HZC01438.1"
                     /translation="MNDIAGIDEAGRGPLAGPVIAAAVILDPARPIAGLADSKTLSPS
                     ARAVLEQQIRAKALSFALGRAEVEEIDTLNILNASLLAMRRAVLALPVQPALAQVDGT
                     HCPWLPCPVEAIVRGDSTIACISAASILAKVARDREMHELDRLYPGYGLARHKGYPTR
                     AHHEALIRLGVSPVHRRSFAPVRHCFSLPHLPPLVEGE"
     gene            complement(1971..3308)
                     /gene="gltA"
                     /locus_tag="VE844_08775"
     CDS             complement(1971..3308)
                     /gene="gltA"
                     /locus_tag="VE844_08775"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004108 - citrate (Si)-synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HZC01439.1"
                     /translation="MSQEPMKQAATAASDRSTVTLIDNATGKRVELPLLGGTLGPSVV
                     DIRKLYAELGYFTYDPGFTSTASCESRITFIDGDKGVLLHRGYTIEDLAEHCDFLEVC
                     YLLLYGELPSASQKADFERIITYHTMLHEQVLSFYHGFRRDAHPMAVMVGVVGALSAF
                     YHDSTDISDPEQRKIASHRLIAKMPTIAAMAYKYSIGQPFVYPRNDLGYAENFLHMMF
                     SVPCETYKVSPVMTRAMNRIFILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLW
                     GPAHGGANEAVLTMLQEIGSKERIPEFISRAKDKNDPFRLMGFGHRIYKNYDPRAAVL
                     RESCHEVLSELGVTREPLLEIAMELEQIALEDDYFVQRKLYPNVDFYSGIILKAMGFP
                     TSMFTVLFAVARTVGWIAQWKEMIEDADQKISRPRQLYTGPVARSFLTLEQRR"
     gene            complement(3491..>4022)
                     /locus_tag="VE844_08780"
     CDS             complement(3491..>4022)
                     /locus_tag="VE844_08780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011698988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UPF0182 family protein"
                     /protein_id="HZC01440.1"
                     /translation="SYYVTLNLIDRKRFEFILLTPMNPKGRDNSHALAMAGCDGDNYG
                     KIIVYTFPKGTLVYGPSQVDALINQDPTITQRFALWDQARSEVHQGKMIMLPIEGVIV
                     YIQPVYLQSTVGSRIPQLQRVIVSQGQLVVMEPSLKEGFEALNKQTVAEDRQQPVQKL
                     TTPRVPSEVTSEASSR"
BASE COUNT          806 a         1207 c         1215 g          794 t
ORIGIN      
        1 gcgataaaga cgtggcaggg gtgattcttc gacatagccg ttgccgcctg tacactcgag
       61 cgcctcggcc acgaccgcaa tcgcccgctt ggtgatccag tatttgccga tggcggtggc
      121 gatccgggta aatcggcgct gcccttcatc cgtagccgac tcatcgaaac cgcgcgccag
      181 gcgcaaggcc agggccgtgg ctgcctcgga ttccaggcat agatcggcga ggacattttt
      241 catgagcggc tgttcgatta agcgcttgcc gaacgcgcac cgatatgccg catgatgcgt
      301 cgcttcggcg accgcgcgcc gtattgtcgc cgctgaggcc caggcgcagt cgaggcgagt
      361 gtggcggccc atctccatga tcgcggctac ccctcgcccc tcctcgccca aaaggcgcgc
      421 ccaggcgccc ctcatctcca cctcgctcga ggcgttggag cgattgccga gcttgtcttt
      481 aagccgcagg atatgaaacc cattgcgcgt gccatcgggc ttccagcgag gtaggagaaa
      541 acaggagagc cccccttgcg cctgagccag caccaggaag gcatcgcaca tcggcgcgga
      601 gcaaaaccat ttgtgaccga tgatcgcata ttcagctcca gggccgcccg ttcccaagga
      661 tctcgcctgg ctggtattgg cccggacatc gctgcccccc tgaggttcgg tcatggccat
      721 gccaaagagc gcaccgcgtt tatgcgctgc gggaataaaa cgcggatcat actcgctcga
      781 gcgcacccgc ggctcccatt cgaccgccaa ttccggctgc aaacggagcg aggggatcac
      841 ggcaaagctc atggtcaggg gacagctggt gccctcatcg acctggtgcc ggagcatacc
      901 gagcgcagcg cgggcgacat gggccccgga tctcgggtgg atccagggaa gcgcgtgggt
      961 attgtggccg atcccgatcc gcatcagctc atgccaggcc gggtgaaact cgacctcgtc
     1021 gatccggtgg ccgaagcggt catgggtgtg cagtaccggt agatagcggt tcgcgagctc
     1081 gccaagccgt aaggtctcgg ccttgccaag gagcgcccca aagacttgcg cctgcggctc
     1141 gatccagccg ccaccctcgc gctgcagcgc ctcacgcaag ggggtgtcgt gttcaaacag
     1201 attatagtct tgtagtggcg gcggctgatt gaagatcaca tcgggcggcc gcgtagccca
     1261 ttcaggggtg ttcatcgatc cctccgaccc ccgcccttac tctccctcca ccagcggggg
     1321 aagatgaggg agggaaaaac agtggcgcac tggcgcaaac gaacgccggt gcactggtga
     1381 aacaccaagc cttattagcg cctcatgatg ggcgcgggtg ggatagcctt tatgccgggc
     1441 caatccatag ccggggtaaa gccggtcgag ctcatgcatc tctcggtcgc gggccacctt
     1501 ggccaggatc gaggcggcgc tgatgcaggc tatcgtgcta tcccctctga cgatggcttc
     1561 taccgggcaa ggcaaccatg gacaatgggt gccgtccacc tgggcaaggg ctggttggac
     1621 gggtagagcc aatacggccc ggcgcatggc cagtaaactc gcgttaagga tattgagcgt
     1681 atcgatctcc tcgacctcag cgcgcccaag cgcaaagctc agggccttag cgcggatctg
     1741 ctgctccagg actgcgcgcg cgctcgggct cagcgtcttg gaatctgcca gccccgctat
     1801 gggccgcgcc gggtccaaaa tgaccgcggc ggcgatcaca ggtcccgcca acggcccccg
     1861 gcccgcttcg tcaatacccg ctatatcatt catgttgttt cctccttcgc cgattttatg
     1921 gcggccggca tgctggccag ggacatctaa gccctaccca gccaatcggc tcagcgacgt
     1981 tgctcgaggg ttaagaagga gcgggctaca ggcccggtat agagctggcg cggccggctg
     2041 atcttctgat ccgcatcctc gatcatctcc ttccactgag cgatccaccc gaccgtgcgg
     2101 gccacggcaa agagcaccgt gaacatgctg gtggggaacc ccatggcctt gaggatgatc
     2161 ccggaataaa agtccacgtt tggatacagc ttacgctgta cgaaataatc atcctcgagc
     2221 gcgatctgct ccagttccat ggcgatctca agcagcggct ctcgggtgac gccgagctcc
     2281 gagagcacct catggcagga ctcacgcaac accgcagcgc gcgggtcgta gttcttgtag
     2341 atccgatggc caaagcccat gagccggaac gggtcgttct tgtccttggc gcgcgagata
     2401 aattctggga tccgctcttt agagccgatc tcctgaagca tcgtcagtac ggcctcgttg
     2461 gcgcctccat gcgccgggcc ccacagcgag gcgatcccgg cggcgatgca ggcaaacggg
     2521 ttggcgccgc tggagccagc cgtgcgcacg gtcgaggtcg aggcgttctg ctcgtgatcg
     2581 gcgtggagga tgaagatccg gttcatggcg cgcgtcatca ccgggctgac tttgtacgtc
     2641 tcgcagggga ccgaaaacat catgtgcagg aagttctcgg catagccgag gtcgtttcta
     2701 ggatagacga agggctggcc gatcgagtac ttgtaggcca tggcggcgat ggtcggcatc
     2761 ttggcgatga gccggtgcga agcgatcttg cgctgttcgg gatcactgat gtcggtgctg
     2821 tcgtggtaga acgcggagag cgcccccacg acgccgacca tgacggccat cgggtgggcg
     2881 tcgcgccgga aaccgtggta gaagctcagc acctgctcat gcagcatcgt atgataggtg
     2941 atgatacgct cgaagtcggc cttttggctt gcgctcggca gctcaccgta gagcaagaga
     3001 taacagacct cgaggaaatc gcagtgctcg gcgaggtcct cgatcgtgta gccgcggtgc
     3061 agcagcaccc ctttgtcgcc atcgatgaag gtgatcctcg actcacagct cgcagtcgag
     3121 gtaaatccgg gatcataggt gaaatacccg agctccgcat aaagcttgcg gatatcgacg
     3181 acgctcgggc ccagtgtacc gccgagtagg ggcagttcta cccgttttcc cgtggcattg
     3241 tcgataaggg tgactgtgga gcggtccgag gccgccgtgg cagcctgttt catcggttct
     3301 tgactcatag ctgatcctct attcggaagt tatttgcctt gagcgagcga aaccgcaggt
     3361 tcagcccgtt cgcaccggga catcgcaaag cctgcaagat actgcactgc cctacccacg
     3421 tcaaattgag gaccagatcc cgagcatggg ttgctcgacc aagtggtctg agtgaggtca
     3481 tcgtggttat ttatctagaa gacgcttctg aagttacttc agagggcaca cgcggggtcg
     3541 tgagcttttg cacaggctgc tgtctatctt cagccacggt ttgcttattc aacgcttcaa
     3601 aaccctcttt caaagagggt tccataacca ctaactggcc ctggctgacg atcacccgct
     3661 gcaactgcgg gatacgacta ccgacggtag attgaaggta aaccggctgg atatagacga
     3721 taaccccctc gataggcaac atgatcatct taccctgatg cacctccgat ctcgcttgat
     3781 cccaaagcgc aaaccgctgc gtgatcgtgg ggtcctgatt gatcagcgca tcgacctggg
     3841 agggaccata gaccaatgtc cccttgggaa aggtgtacac aatgatctta ccgtaattgt
     3901 ctccgtcaca tcctgccatg gccaaggcat gtgagttgtc ccggcctttg ggattcatag
     3961 gcgtaagcag aataaattca aaccgctttc gatcaatcag attgagcgtt acatagtaag
     4021 ag
//
LOCUS       DASQSL010000858         1053 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_167921, whole genome shotgun sequence.
ACCESSION   DASQSL010000858 DASQSL010000000
VERSION     DASQSL010000858.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167921"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            96..980
                     /locus_tag="VE844_08785"
     CDS             96..980
                     /locus_tag="VE844_08785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010846354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS982 family transposase"
                     /protein_id="HZC01441.1"
                     /translation="MSQLVAMFCDIDDFCKGFEPIYQQRLLQSGQRQRVRQSQLSLSE
                     IMTIIVYFHASHYRDFKHYYTDYVAVHLRSEFSTLVSYSRFVELMPRALVPLCGYLHT
                     RKGRCTGITFVDSTPLAVCHNKRIGRHKVFDGYATRGKCSMGWYFGFKLHLMVNDQGE
                     LLGFRVTSGEVDDREPVEQMTAELWGHLYGDRGYISKVLHDALLAGGLTLITLIRRNM
                     KPRLMRLWDRLMLRKRFLIETINDQLKNVSQIEHSRHRSLTGFMVNLVSGLIAYTYQP
                     KKPSLGLWRGESGLPVVV"
BASE COUNT          226 a          253 c          315 g          259 t
ORIGIN      
        1 aattcgggat aagcaggagg gtcttgctag cccataagga cccgcgtatg gtggctgtat
       61 cgcgaaatgc agctgtaacc atactggagg tctctatgag ccagctcgtc gccatgttct
      121 gcgatattga cgacttttgc aagggttttg agccgatcta ccagcagcgt ctgctgcaaa
      181 gcggtcagcg ccagcgggtg cgccagagtc agctgagttt gagtgaaatc atgacgatta
      241 tcgtctattt ccatgccagt cactaccggg atttcaagca ctattacacc gactatgtgg
      301 ccgttcatct ccgctctgag ttctcgactt tagtcagcta tagccggttt gtcgagctga
      361 tgccaagggc cttggtgccg ctttgcggtt atctgcacac ccgcaaaggc cgttgtactg
      421 ggatcacctt tgtcgattcc acgccgctgg cggtgtgtca caacaagcgc atcggccgcc
      481 acaaagtgtt tgacggttat gcgacgcgtg gaaaatgctc gatgggctgg tattttggct
      541 tcaagctgca tctgatggtc aatgaccagg gtgagctatt gggattccgc gtgacgagcg
      601 gtgaagtgga tgaccgcgag ccggtagagc agatgacagc ggagctgtgg gggcatctct
      661 acggcgatcg cggctatatc tccaaggtgt tgcacgacgc gttactggcg ggcggcttga
      721 ccttgatcac gttgattcgg cgcaacatga agccgcgact gatgcggttg tgggatcggc
      781 tgatgctgag aaagcggttt ctcatcgaaa cgattaacga ccagttgaag aatgtgagcc
      841 agattgagca ttcgcgtcac cgcagtctga cgggattcat ggtgaattta gtgagtggac
      901 tcatcgccta cacctatcag cccaagaagc catcactggg cctgtggcgc ggggaatcgg
      961 ggctgcctgt agtggtgtag cttagccaga actcgggtta agtaggtggc tttagcaaat
     1021 gtataaagac ttttttgata gcccactcag cat
//
LOCUS       DASQSL010000859         1333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_157633, whole genome shotgun sequence.
ACCESSION   DASQSL010000859 DASQSL010000000
VERSION     DASQSL010000859.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1333
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157633"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..364
                     /locus_tag="VE844_08790"
     CDS             <1..364
                     /locus_tag="VE844_08790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016875548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alkaline phosphatase D family protein"
                     /protein_id="HZC01442.1"
                     /translation="GQGDAGVLGREVQLGELLKFIKDEGIKNVVFITADVHFAAAISY
                     DPARAQFGDFDPFWEFVIGPVHAGAFGANELDASFGPWFEYLRAPSTEDFTIQNLPPP
                     NLHSFGTAEVTVADLPQW"
     gene            663..>1333
                     /locus_tag="VE844_08795"
     CDS             663..>1333
                     /locus_tag="VE844_08795"
                     /inference="COORDINATES: protein motif:HMM:NF033559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC01443.1"
                     /translation="MGDLREEVSSRQGLAVGAVWVLHQLAKRLGLVKALGQSRTAKLA
                     LWLVLASVIAQGSRLSAVRLAQQHAVCDLLGLEAFNEDDLYQAMDWLDEQQPALEEAL
                     FAHRYATAGQVPTLYLYDVTSSYLEGDQNELGEYGYNRDGKRGKKQIVIGLLTDEEGW
                     PITVEVFAGNTQDPKTFKAQIDKLVQRFGVKQVTLVGDRGMIKTTQINDLKDEGFHYL
                     TAITKP"
BASE COUNT          303 a          354 c          381 g          295 t
ORIGIN      
        1 gggacagggg gatgcggggg tcttgggccg ggaggtgcag ctcggcgagc tgcttaaatt
       61 catcaaggac gaagggatca agaacgtagt attcatcacg gccgacgtcc attttgcagc
      121 cgccatctcc tacgatcctg cgcgggccca gttcggggat ttcgatccgt tctgggagtt
      181 cgtcatcggc cccgtacatg cgggtgcctt cggtgcgaac gagctcgacg ccagtttcgg
      241 tccatggttc gaatatttga gggcgccaag taccgaggac ttcactatcc agaacttgcc
      301 gccgcccaac ctccactcct ttggcaccgc cgaggttact gtagcggatc ttccacagtg
      361 gtaattcatt aaacccttaa tattcaataa gataccctaa ttcttacccg gtatgtggtc
      421 actaatatta ttagtatatg tattgacaag ctttatgtat aactttaata tgtggtcacg
      481 atgtttatcg acgatgccac cttcacccgc aacggtaaaa cctaccggcg tgtgctcttg
      541 cgtaactcct accggttcaa cggtcaagtg cgtcagacac cctggccaat ttatcacact
      601 gctccgatga tgaaatccgg gccattaagc tggccctcaa acacaaagac cagttgacct
      661 acgtggggga cctccgtgag gaggtaagta gccggcaggg tttagcggtg ggcgccgtct
      721 gggtcttaca ccagttagcc aagcggctgg gactggtcaa ggcgttgggt caaagccgca
      781 ccgcgaaatt agcgttatgg ctggtcttgg cgagcgtcat tgcgcaaggc tcacggctgt
      841 ctgcggtgcg cttggcgcaa cagcatgcgg tgtgtgacct cctggggctc gaggccttca
      901 acgaggatga tttgtatcag gcgatggatt ggctcgatga gcagcagccc gccctggaag
      961 aggccttgtt tgcccaccgc tacgccactg cgggccaggt gccaacgctg tatctgtacg
     1021 atgtcaccag cagttacctc gaaggggatc agaatgagtt gggcgagtat ggctataacc
     1081 gcgacggcaa gagaggcaag aaacagattg tcattggcct gttgaccgat gaagagggat
     1141 ggccgattac ggtggaggta tttgccggca acacccaaga tcccaagacc ttcaaagccc
     1201 aaatcgacaa gctggtgcag cgctttgggg tcaagcaggt caccctggtg ggtgaccgcg
     1261 ggatgatcaa aaccacgcag atcaacgacc tgaaagacga gggctttcat tacctcaccg
     1321 cgatcaccaa acc
//
LOCUS       DASQSL010000860         1478 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_101938, whole genome shotgun sequence.
ACCESSION   DASQSL010000860 DASQSL010000000
VERSION     DASQSL010000860.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1478)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1478)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1478
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101938"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..254)
                     /locus_tag="VE844_08800"
     CDS             complement(<1..254)
                     /locus_tag="VE844_08800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018076652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HZC01444.1"
                     /translation="MKILILGAGRVGSTVAENLISEQNDISVIDADEAPLRYLKDRFD
                     LHTLCGDASHPSVLEQAGAMEADMMLAVTRNDQTNLVACK"
     gene            392..>1478
                     /locus_tag="VE844_08805"
     CDS             392..>1478
                     /locus_tag="VE844_08805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020166827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009267 - cellular response to starvation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation CstA family protein"
                     /protein_id="HZC01445.1"
                     /translation="MSQRLVKHWLTVSAWLAIALLGAGAVGGIALNRGESINSLWFIA
                     AAVCIYALGYRFYSAFIAARVLVLDSSRATPAERLNDGRDFVPTNKWIVFGHHFAAIA
                     GPGPLIGPTLAAQFGYLPGTLWILVGAVLGGCVQDFVTLFFSTRRDGRSLGQMARDEL
                     GPVGGAVALIGVMAIMIILIAVLGLVVVNAMKHSPWATSTVAATIPIALLIGVYMRGI
                     RPGRVLEGTAIGVTLLVFAVIGGGWIDDHPGLRGWFDYEGPELALMVIVYGFAAAVLP
                     VWLLLAPRDYLSTFMKIGTIVALAIAIVILRPEVKMPAFTQFVDGTGPIFGGELFPFV
                     FITVACGAISGFHSLVASGTTPKLLINE"
BASE COUNT          260 a          396 c          435 g          387 t
ORIGIN      
        1 aatttgcatg ccacaagatt ggtctgatcg ttacgggtta cggccagcat catatcggcc
       61 tccatggcgc cggcctgctc tagtacagag ggatgtgagg cgtcaccgca taaggtgtgt
      121 aaatcgaaac gatcctttaa ataccgcagg ggtgcttcgt ctgcgtcgat cacactgata
      181 tcattttgtt ccgatatcag gttttctgcc accgttgaac cgacgcggcc cgctcctaat
      241 ataagtatct tcacaggtat tccttttgtt gctaggctcg gttaacttca taatctctaa
      301 gcgggcggag ggcgaattct tgatgtgccg caatagatga gcatgctact tagcaaggcg
      361 agtgacttgg gtgaataaca cgataaactt tatctctcaa cggttagtaa agcactggct
      421 cacggtatcg gcgtggcttg caatcgccct cttgggcgcc ggtgccgtag gcgggattgc
      481 actcaatcga ggcgagtcga tcaatagcct ctggtttatt gccgcagcag tatgtatata
      541 tgcgctcggt taccggttct acagcgcctt tatcgcggcg cgggtgctgg tactcgatag
      601 tagccgggca acgccagctg agcgtctcaa cgatggccgg gattttgtac cgaccaacaa
      661 atggatcgtg ttcggccacc actttgccgc tatcgctgga ccgggtccgc tgattgggcc
      721 gacgctcgcc gcccagttcg gttatctccc cggtaccctg tggatcttag tgggcgccgt
      781 gttgggggga tgtgtgcagg actttgtgac gttgtttttt tccacccgcc gcgacggacg
      841 atcgctcggc cagatggccc gcgatgagct cgggcctgta ggcggtgcag tagcgctcat
      901 cggtgttatg gccattatga tcatcttgat cgcagtcttg ggactggtgg ttgtcaatgc
      961 catgaaacac agtccctggg ctaccagtac ggtagcagcc accatcccga tcgcgctttt
     1021 gatcggcgtg tacatgcgcg gtattcgtcc gggccgggtg ctcgaaggca ccgcgattgg
     1081 ggtaaccctg ctcgtgtttg ccgtgatcgg tgggggctgg atcgatgatc atcccggctt
     1141 gcgcggctgg tttgattatg aaggccctga gcttgcgctc atggtcatcg tctatggctt
     1201 tgccgcggcg gtactgccgg tatggctgtt actggccccc cgcgattatc tctccacctt
     1261 catgaagatc ggcaccattg tggctctggc gatagctatc gtgatcctgc ggcccgaggt
     1321 caagatgccg gccttcaccc agttcgtcga tggcacgggt cctatctttg gcggggagct
     1381 gttccccttc gtgtttatca ctgtggcttg tggggccatc tctgggtttc attcgctggt
     1441 ggcctcgggt accaccccga aacttctgat caatgaga
//
LOCUS       DASQSL010000861         2001 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_87233, whole genome shotgun sequence.
ACCESSION   DASQSL010000861 DASQSL010000000
VERSION     DASQSL010000861.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2001
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87233"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..393)
                     /locus_tag="VE844_08810"
     CDS             complement(<1..393)
                     /locus_tag="VE844_08810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003544412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TCP-1/cpn60 chaperonin family protein"
                     /protein_id="HZC01446.1"
                     /translation="MPAKKLVYADEARKSLRIGIETLADAVKVTLGPKGRNVVLDKKF
                     GPPQVCSDGVTIAKEIELPDAFENMGAQLLKEAATKTNDAAGDGTTTSIVLAQAIINE
                     GFKNVTAGSNPLAIKRGIEKAVDTVVEEL"
     gene            complement(406..708)
                     /gene="groES"
                     /locus_tag="VE844_08815"
     CDS             complement(406..708)
                     /gene="groES"
                     /locus_tag="VE844_08815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020392654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HZC01447.1"
                     /translation="MVSIKVKFIPLGDRVVIMPLEGEQTTKGGIYLPDTAKEKPQIGE
                     VIAVGPGRISDDGTRIPMELAVGNRVIYSKYAGTEYKDGDEEYLILRESDILAKIA"
     gene            complement(785..1666)
                     /locus_tag="VE844_08820"
     CDS             complement(785..1666)
                     /locus_tag="VE844_08820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013561272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HZC01448.1"
                     /translation="MASGVVIVKQYERLVVLKWGRLENIAPPGFRFLIPIIYTGRSVD
                     LREQVVRVPTQKYITKDNVVVDMDFVLYYRVMADQAEKSVLEVADHHAAVRNLAVGEL
                     RSIVGNFTLGDALSERERMQSQLQVALDENTGRWGVKVLGAAINEIDPPSGVKVAMER
                     EKSAAAIKTAEITESEGQRQAQINRAEGEKQAAILQAEGRRQAAILEAEGDQQAQVLR
                     AQGFSSALERIYQVANTVDVKTMSLQYFDTLKSLGSSPSTKFIFPMEFTSMLSPFLGM
                     GGNNHQQGNGGSAASQT"
BASE COUNT          356 a          598 c          530 g          517 t
ORIGIN      
        1 cagctcttcc accacggtat ccacggcctt ttcaatgccc cgcttgatgg ccaggggatt
       61 gctaccagcg gtaacgttct tgaatccttc attgataatg gcctgggcca gcacaatgga
      121 agtagtggta ccgtcaccag cggcgtcgtt ggtcttggtg gcggcttctt taaggagctg
      181 agcgcccata ttctcaaagg catcaggcag ttcgatttct ttggcgatgg tgacgccgtc
      241 actgcagacc tggggcggac caaacttctt gtccaggacc acgttgcggc ccttggggcc
      301 cagggtaact ttaaccgcat cggccagggt ctcgatgcca attcggaggc tcttgcgggc
      361 ctcatctgca taaaccaatt tctttgcggg cattagttcc tccttctagg ctattttagc
      421 taggatgtca ctttcccgca ggattaggta ttcctcgtcg ccgtccttgt attccgtgcc
      481 agcgtacttg gagtagatca cccggttacc tacagctagt tccatcggta tccgagtccc
      541 gtcgtcagag attcggcccg gtcccaccgc aatcacttcc cctatttgag gcttttcctt
      601 agcggtgtcg ggtaagtaaa tcccaccctt ggttgtctgc tctccttcta ggggcatgat
      661 gactacccgg tcgcccaatg gaataaactt caccttgata cttaccatct tggtctcctt
      721 tgtgagttcc gttctattac gtttagactt ttgcaacgtg tcttctgggc tcggcctttc
      781 ctgtctaggt ctgggatgcc gcgctacctc cgttaccttg ctggtggttg ttgcctccca
      841 ttcccaggaa aggcgagagc atggaggtga actccatggg gaaaatgaac ttggtggagg
      901 gactggaccc cagggacttc aaggtatcga agtactggag gctcatggtc ttcacatcca
      961 cggtgttggc cacctggtaa atccgctcca gggcggagct gaacccctgg gcccgcagca
     1021 cctgggcctg ctggtcgcct tcagcttcca gaatggcggc ctggcgtctt ccctcagcct
     1081 ggaggatggc cgcttgcttc tctccttcag cccggttaat ctgggcttgg cgctggccct
     1141 cagactcggt gatttcagcc gtcttgatgg cggccgccga cttctcccgc tccatggcga
     1201 ccttcacccc agagggcggg tcaatttcat tgatggctgc tcccagcacc ttgactcccc
     1261 agcgcccggt gttctcgtcc agggccacct gaagctggct ctgcatccgc tcccgctcgc
     1321 tcagggcatc gcccaaggtg aagttgccga cgatggacct caactcaccc accgccaggt
     1381 ttcgtactgc tgcgtggtgg tctgccacct ccagcaccga cttttcggcc tggtccgcca
     1441 tgacccggta gtacaggacg aagtccatgt ccaccaccac gttgtccttg gtgatgtact
     1501 tctgggtggg cacccgcacc acctgctccc gcaggtccac cgagcggcca gtgtagatga
     1561 tgggaataag gaagcggaac ccgggtgggg caatgttctc gaggcggccc cactttaaca
     1621 ccaccagcct ctcgtactgt ttcacgatca cgacgcctga agccatgctt acctcctgag
     1681 ctggttagat ttgtttatct acatcttggg gagagccgat tccggaagac gctcctaaga
     1741 tgctggctat caggttgcaa tgcctaatct gaggttcggt ccggttaatc tggggattcc
     1801 tgagtagtga gtatttctat gggttaagcg gcgagagcta atcgcccttc cccttcgttc
     1861 aacagctgcg ccttctggca ggccagtacc gtagcatcca ctcccttgaa aacataagcg
     1921 taatcttccg attcgctacc ctttaaaggt ttggtgtacc atctgccatg ctctctatgt
     1981 gttcgcttgt agactgcgta c
//
LOCUS       DASQSL010000862         1245 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_21124, whole genome shotgun sequence.
ACCESSION   DASQSL010000862 DASQSL010000000
VERSION     DASQSL010000862.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1245
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21124"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(143..1015)
                     /locus_tag="VE844_08825"
                     /pseudo
     CDS             complement(143..1015)
                     /locus_tag="VE844_08825"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
BASE COUNT          228 a          405 c          320 g          292 t
ORIGIN      
        1 agcgacggta gaccaggcct atcggtttct gcggattccc cggttgcagt gcctcactag
       61 ctcggtcgtg atcagcctac cattcccttc ccatcccacc gcacgttcag ttttcccgag
      121 tacggcggtc cgacagtctt cgttacaagg catgcgcggg tgcgctttgg tacctaatga
      181 gaccgctgcc gatgtagatg atccccatgg cattcccgcg acagatcagg atggcatcat
      241 cgcagtaccg atgcagcgtt gcgcccagct cctctgggta gccccgcttg tgccacactt
      301 ggtcgagcag gttcaaataa atgttgctgt agagcggtgc gatcggggag ccctggggga
      361 cccctatcct cgtcggctct acctgcccct gctaggctac actgaccttg aggctctgct
      421 tgatcatccg cagcatgctg ccatccacca cgcggctccg aatgagccgc aacagcttat
      481 cgtgagggat agtcgtaaaa taactttgga aatcaatctc cacgacaccc caggcgtgcc
      541 ggtagaggtc ctcccggatg gccagcgagg ccatcttggc atcccgcttc gggcggtagc
      601 cgtaagagca gtcatggaag tcggcttcaa agatgggctc gaggacgagc ttcatggcgg
      661 tctgcaccac gcggtcctca accctcgcga tcccaagcgg gcgtgtaccg cccttgggct
      721 tcgggatgtc tacccgccgc accggttgga atcgataggt cttcttgcgt aggctttcct
      781 gcactcgccc aatcatctcc ctttcttgtc cgctcgacac aatcgcctcg atggtctctc
      841 catctacccc aggtgcccct tggttcgcct tgacttgtcg ccaagcctcc cacaggacat
      901 cctcgcgata taccttatcg tacaggctgt agaacttcac ctctttgtcc tgtttggcct
      961 tgtaatatag ggtcctctgc agctgccgaa cagtatccgt cttgtttcta gccatcaggc
     1021 aatcaaaacc tcctcaactg cttcaaacac cattgactga agtagggtcc cttcccctcg
     1081 ggctgggtta tgctgtccca taccctctag tggtactatg aaccccgcgg aatcctcatg
     1141 cgaccgactc cgacttcggt tgcccttata cggagccgtt gctcgcggcc accgagcatc
     1201 gcatgaggcc tcccggccta gggtcgtgag accttcacag cgtgc
//
LOCUS       DASQSL010000863         1775 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_7011, whole genome shotgun sequence.
ACCESSION   DASQSL010000863 DASQSL010000000
VERSION     DASQSL010000863.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1775)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1775)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1775
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7011"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..182)
                     /locus_tag="VE844_08830"
     CDS             complement(<1..182)
                     /locus_tag="VE844_08830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013442522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HZC01449.1"
                     /translation="MINAVTQPVIVVLGDSLSTGYGIELNQGWVAQLQQRLRREGYPH
                     RVVNASIGGETTRGALA"
     gene            232..909
                     /locus_tag="VE844_08835"
     CDS             232..909
                     /locus_tag="VE844_08835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013033518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZC01450.1"
                     /translation="MSVDPIIHAEDLVKRVPTPEGDLTILDHINLSIARSEALAIVGA
                     SGSGKSTLLGLLAGLDTPTAGRVTLDGVDLNTLDEDGRALLRGARVGFVFQFFYLLSN
                     LTALENVMLPLELAGHAQPREAALSELEAVGLGHRSGHYPNQLSGGEQQRVAIARAFA
                     ARPPLLFADEPTGNLDSKTGNRIAEVLFSLKQEYGTTVVLVTHDTSLTAHCTRTLTLD
                     NGRLVDS"
     gene            924..>1775
                     /locus_tag="VE844_08840"
     CDS             924..>1775
                     /locus_tag="VE844_08840"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC01451.1"
                     /translation="MKALGFSLLTLKRDWRTGELRLMVMALILAVGAVTAVSFFTDRV
                     RQAMAIQGGAMLAADLVVDSVNPIPASLLAKAQALDLKTARTVLFRSMVTRGEQLQLA
                     EVKAVSSAYPLRGRLAIGEAPFDPPQETGQIPAAGTVWLDARMLQLLKLSPGQPITLG
                     AAELTVAKVLLFEPDRGGDLFHIAPRLMMNLEDLPATGLLSPGSRVRHRLLLAGSRDA
                     IETYRQWTKQHFQKELQLINVREARPELRAALEHGDRFLGLAALSSVLLASVAIATAA
                     RRFATRHL"
BASE COUNT          349 a          542 c          500 g          384 t
ORIGIN      
        1 gccagcgccc cccgggtggt ctcaccgccg atgctggcat tgaccacccg gtgcgggtag
       61 ccttctcgcc taagccgctg ttggagttgc gcaacccaac cctggttgag ctcgatacca
      121 taaccggtgc tcaaactatc gcccaagacc acgatgactg gctgggttac cgcatttatc
      181 attgatccaa ataacactac aagcagcaga accgcccgca ttatccgcat tatgagtgtt
      241 gatcccatca tacacgctga agatcttgtc aaacgggtac ctacccctga aggggacctt
      301 acgatcctgg atcatattaa cctttctatc gctcgatccg aagccttggc gatcgtgggc
      361 gcttcaggct caggtaaatc cactctgctc ggcttgctcg cgggtttgga tacacccacc
      421 gcggggcggg tgaccctcga tggtgtggat cttaacaccc tcgatgagga cggccgtgcg
      481 cttcttcgtg gggcgcgggt gggctttgtg tttcaattct tctatctgtt gtccaatctc
      541 actgccttag agaatgtgat gctgccctta gaacttgcgg gtcatgccca accccgagaa
      601 gcggctctct cagaactcga ggcggtgggc ttggggcacc ggagcggcca ttatcccaat
      661 caactctctg gcggtgaaca acaacgggtg gcgatcgccc gcgcctttgc cgcacgacct
      721 ccgcttctgt ttgccgatga accgaccggt aacctcgaca gtaaaaccgg caaccggatc
      781 gcggaggtat tattctcctt aaagcaggag tatggtacta cagtggtatt agtgacccat
      841 gatacctcat tgacagcgca ttgcacgcga acactaaccc tcgataatgg ccgtctggta
      901 gactcttgat agatcgaaag cccatgaaag cgctcggatt ctccctcctg accttaaagc
      961 gtgactggcg caccggcgag ctgcggctta tggtgatggc cttgatcctc gccgtaggcg
     1021 cggtcacagc cgtcagcttc ttcaccgatc gggtgcgcca agctatggcg atccagggcg
     1081 gtgcgatgct ggcggcggat ctcgtggtgg attccgtcaa tccgatcccc gcatcgttgc
     1141 tagccaaagc ccaagccttg gatctgaaaa ccgcccgtac cgtgttattt cgcagcatgg
     1201 tgacccgcgg tgagcagctg caactcgcgg aggtgaaggc agtaagcagc gcttatccgc
     1261 ttcgcggccg cttagcgatc ggtgaggcgc ccttcgatcc cccacaggag acggggcaga
     1321 tcccggcagc tggcactgtc tggctcgatg ccaggatgct gcaattgctc aagttatccc
     1381 cagggcagcc gatcacgctc ggcgccgccg agctcacggt cgccaaggtc ttattgtttg
     1441 aacctgatcg cggtggggat ctgttccata ttgccccaag gctcatgatg aacctcgagg
     1501 atctcccggc aacgggcctc ttgtcaccgg gcagccgggt ccgccaccga ttattgctgg
     1561 ccggaagccg cgacgctatc gagacctata ggcagtggac gaaacaacac ttccagaaag
     1621 agctacagct gatcaatgtg cgcgaggcgc gtcccgaatt gcgagccgcc ctcgagcacg
     1681 gggatagatt cttggggctt gcggccttat ccagtgtgtt gctcgccagt gtagccatcg
     1741 ccaccgccgc tcggcgcttt gccacccggc acctg
//
LOCUS       DASQSL010000864         4331 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_75257, whole genome shotgun sequence.
ACCESSION   DASQSL010000864 DASQSL010000000
VERSION     DASQSL010000864.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4331
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75257"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..818
                     /locus_tag="VE844_08845"
     CDS             <1..818
                     /locus_tag="VE844_08845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HZC01452.1"
                     /translation="EEQSRRKIALSTQIQAIEEQLAAQNGVPFNELLGEAQAEDRDSL
                     PGRISDWASHIEVLENQRLELVRGSERLQGELRQMDGSAQAAFALQRGQEALARIRGG
                     AEEYVRLKLSAVLLRRAIEIYRERNQGPVLKRAGEFFSVLTCGAFARLDTDFGEDDSL
                     LLVGVRNPGPGERVSVEGMSVGTLDQLYLALRLAAIDRYLETNEAIPLIIDDILIQFD
                     EERSSATLRVLWELSQKTQVLLFTHHRHLLDLARRHIAPEAVVIHELEPRYLA"
     gene            790..2406
                     /locus_tag="VE844_08850"
     CDS             790..2406
                     /locus_tag="VE844_08850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phytase"
                     /protein_id="HZC01453.1"
                     /translation="MSLNRAIWRDLGMPYRVIARRVKTRRVHAALTSTWVATGAVAAD
                     NIGPSTTTEPYIVPGHPLVKTKSILTVGDSVPLATDPAKSYRLLGIPDGLGAFQSEGK
                     TFTLLVNHELGPTQGPPHAHGFPGAVVSHWRIHRDTLEVLSGRDLATKVQVWDPASRS
                     YIQGTGAWSHFCSADLAAPNAFFYSGLGTLHRLYLTGEETRPPSSADHGRAFAHIVTG
                     PNQGQSWQLPRLGRYAFENAVASPHGKEKTIVVGLDDSDRSTSSSRICTQQGQKDCTV
                     PSELYVYVGAKQAQGNEIERAGLTNGQLYGLKVSVNDKPIAEENDVNGLDPTSFGGSG
                     HFSLHQLGDVSGKSGIELQQRSIDAGIMRFQRVEDGAWDPRSDHKNNFYFVTTASASQ
                     NSRLWRLRFADIEHPELGGTIAILLTGSEGHKMLDNLTIDRLGRLLIQEDVGDDARLG
                     KIWLYLIDTGHFIEVAQHNPRFFLNHGQAEFITQHEESSGIIEAEGILGKGWFLLDVQ
                     AHKAHPETALVEFGQVLAMFVDPRLDQEVK"
     gene            complement(2399..3043)
                     /gene="thiE"
                     /locus_tag="VE844_08855"
     CDS             complement(2399..3043)
                     /gene="thiE"
                     /locus_tag="VE844_08855"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020159977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004789 - thiamine-phosphate
                     diphosphorylase activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HZC01454.1"
                     /translation="MGKPRIPPRGLYAITPGLIATGTLLDAVEAAIRGGAVWIQYRNK
                     TAAFEDRKRQAQALCRLCHRCRVPLIVNDDPRLAWDIGADGVHLGQDDPHYEEARALL
                     GPQAILGVSCYNSLDRAVSAQRIGANYVAFGRFFPSKTKPEAKQAPLALLHEARRQLS
                     IPIVAIGGITPENGGALIEAGADLLAVIEGVFGQSDLEAAARRYTELFRDYPVI"
     gene            3142..3306
                     /locus_tag="VE844_08860"
     CDS             3142..3306
                     /locus_tag="VE844_08860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="HZC01455.1"
                     /translation="MKRYMCVICGFIYDEAKGLPEEGIEPGTRWEDIPPNWTCPDCGA
                     RKEDFEMMEI"
     gene            complement(3314..3742)
                     /gene="hemJ"
                     /locus_tag="VE844_08865"
     CDS             complement(3314..3742)
                     /gene="hemJ"
                     /locus_tag="VE844_08865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013442987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase HemJ"
                     /protein_id="HZC01456.1"
                     /translation="MLWIKAFHIIFMVTWFAGLFYLPRLFVYHALSQDEKVSLQRFKL
                     MERKLFFGIMTPGGVLTIVFGLWILVGYGWDNYLAMGWIRVKLMLVAILIGYHLYLGK
                     LLLDFSRDRNRHSPVYYRWINEFPTVILIAVVILAVVKPF"
     gene            3801..>4331
                     /locus_tag="VE844_08870"
     CDS             3801..>4331
                     /locus_tag="VE844_08870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011700246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZC01457.1"
                     /translation="MSISPKTKKVTAWALYDWANSGFATTVMAGFFPVFFKQYWSAES
                     EAGVSTLQLGLGNSLASLLVVFLSPILGAIADKGSAKKKFLLFFTFLGVANTALLYLV
                     ARGEWQIAIGLYALAMIGFLGGLTFYDALLVSVAEKHELHRISALGYALGYLGGGLLF
                     TFNVVMVQWPEVFGLQD"
BASE COUNT          938 a         1193 c         1278 g          922 t
ORIGIN      
        1 tcgaagagca atcccgccgg aagatcgcgc ttagcacaca gatccaagcg atcgaggaac
       61 aattggcggc acaaaacggc gtgcctttta atgaactgct gggggaggct caagcggaag
      121 accgcgacag tctgcctggg cggatcagtg attgggcaag ccatatcgag gtattggaga
      181 accagcggct cgagctcgtg cggggatcgg agcgtcttca gggtgaattg cggcagatgg
      241 atggcagtgc tcaggcggca tttgcgctcc aacgcggcca agaggcgctg gcgcgcattc
      301 gcggcggggc tgaggagtat gtccggctta agctttcggc ggtactcttg cgccgggcca
      361 tcgagatcta ccgcgagcgc aatcaggggc ctgtgctcaa acgggccggc gagttcttct
      421 cggtgctcac ctgcggcgcc tttgcgcgcc tggacaccga ttttggcgag gatgacagtc
      481 ttctgctggt cggcgtgcgc aatcctggcc cgggcgaacg cgtgtccgtc gagggcatga
      541 gcgtggggac gctagaccag ctctatctcg ccttgcggct tgcggccatt gacaggtatc
      601 tcgagaccaa tgaagcgatc cctttaatca tcgatgatat tctgattcag ttcgatgagg
      661 agcgctcatc ggccaccctc cgggtgctct gggagttgag ccaaaagacc caggtgctgc
      721 tatttaccca tcaccggcat ctgctcgatc tggcccggcg gcatatcgcg cctgaggcag
      781 tggtcattca tgagcttgaa ccgcgctatc tggcgtgatc tgggaatgcc ttaccgggtg
      841 atcgcccggc gcgtaaagac gaggcgtgtt catgcagcac tcacatccac ctgggtagct
      901 acaggcgctg ttgcagccga taacatcggg cctagcacta cgacagagcc gtatattgtg
      961 cctggccacc cgctggtcaa aaccaaatcg atccttactg taggcgactc ggtgccgctg
     1021 gctactgacc ccgcaaagtc ctaccggctg ctcgggatcc ccgacggctt gggcgcgttc
     1081 caaagcgaag ggaagacctt taccctgtta gtcaatcatg aactcggtcc cacccaaggt
     1141 ccaccccatg cgcatgggtt tccaggagcc gtcgtttcac actggaggat ccatcgggat
     1201 acgctcgagg tcctaagcgg ccgggatttg gcaactaagg tccaggtctg ggatcccgct
     1261 agccgttcct acatccaggg aactggagcc tggagtcact tctgctcggc ggatttagcg
     1321 gcccctaacg catttttcta tagcgggctt ggcaccctcc accgtcttta tctcaccggt
     1381 gaggagaccc gtccaccctc ctccgctgac catggacgcg ccttcgcgca tattgtcacc
     1441 gggccgaacc aaggtcagtc ctggcaactc ccgaggcttg ggcgctatgc cttcgagaac
     1501 gcggtggcga gcccccacgg aaaggaaaag accatcgtcg tgggcctcga tgactcggat
     1561 cgcagcacca gtagcagccg tatttgcacg cagcaaggac agaaggactg caccgtgccg
     1621 agtgagcttt atgtctatgt aggtgccaaa caagctcaag ggaacgagat cgagcgtgcc
     1681 ggactgacca atggccagct gtatggcctc aaggtctcgg tcaacgataa acctattgct
     1741 gaagagaacg atgtgaatgg tcttgatcca acgagtttcg ggggctctgg gcatttcagc
     1801 ctgcatcagc tcggcgatgt ctcgggcaag agtggcattg aattgcagca gcggtcgatc
     1861 gatgcgggga tcatgcgttt ccaacgcgtc gaggacggcg cctgggatcc tcgatctgac
     1921 cataagaaca acttttactt cgtgaccacg gcgagcgctt ctcagaatag ccgtctgtgg
     1981 cggctgcgct ttgcggatat cgagcatcct gagcttggcg gcaccatcgc gatcctgctc
     2041 acgggcagcg aggggcataa gatgctcgat aacctgacca tcgatcgcct gggccgcctt
     2101 ctgatccaag aggatgtcgg tgacgacgcc cgccttggca agatctggct ctatcttatc
     2161 gatacgggcc atttcatcga ggtggcgcag cacaatccac ggtttttcct aaaccatggg
     2221 caagcggagt ttatcaccca gcatgaggag tcatccggta ttatcgaggc cgaggggatc
     2281 ctcggcaagg gctggttcct tctcgacgtt caggcccata aggcgcatcc ggagaccgcg
     2341 cttgtcgagt ttgggcaggt gctggccatg tttgtggatc caaggcttga ccaggaggtc
     2401 aaataaccgg gtaatcacgg aatagctcag tatagcggcg cgccgccgcc tcgagatcgg
     2461 attggccaaa gacgccttcg atgacggcca gcagatcggc gccggcttca atcaatgcac
     2521 cgccattctc gggcgttatg ccgccaatcg caacgatggg aatggacaat tgccggcgcg
     2581 cctcgtggag taacgcgagt ggggcctgtt tggcctcagg tttggtttta gacggaaaga
     2641 atcgcccgaa ggccacgtag ttggcgccga tccgctgggc ggatacagcc cggtccaagg
     2701 aattgtagca ggatacgcct aagatcgcct gcggtccgag cagggctcgg gcttcctcat
     2761 agtgaggatc atcttgaccc agatgcacgc cgtcggcccc gatgtcccac gccagtctgg
     2821 gatcatcgtt gacgatgagc ggcacccggc agcgatggca gagtcgacag agggcctgag
     2881 cctgtctttt acggtcctca aaagcggctg tcttgttgcg gtattggatc catactgcgc
     2941 cgcccctgat cgccgcctcg accgcatcga gtagtgtccc ggtcgcgatc aggcccggcg
     3001 taatagcata caggccacgc ggtggtatcc tcggttttcc catggggtgt acgatagaaa
     3061 ttttatgggt attctacaag tcccatggaa atgcgagaat ggcgcacccg attaaaacgt
     3121 aaggagggag cgtatagagt aatgaagcgc tatatgtgtg tgatttgtgg atttatctat
     3181 gatgaggcta aaggtttacc tgaggaaggg atcgaaccgg gcacccgctg ggaggatatt
     3241 cctcccaact ggacctgtcc ggactgcggc gcccgcaagg aggatttcga gatgatggag
     3301 atatgagcgc tcgttaaaac ggttttacta ccgcgaggat aacgaccgcg atcaagatca
     3361 ccgtggggaa ttcattgatc cagcggtaat agaccgggct gtggcgattg cgatcccggc
     3421 taaaatcgag caagagcttg cccagataca gatgatagcc gatgaggatg gccacgagca
     3481 tcaattttac cctgatccaa cccatcgcca ggtagttatc ccagccatag cccactaata
     3541 tccaaaggcc gaacacgatg gtcagcaccc cacccggggt catgatcccg aaaaaaagtt
     3601 tgcgttccat aagcttgaaa cgctggaggc tgactttctc atcctgactt aaggcatgat
     3661 acacaaataa ccggggcaga taaaacaagc ccgcaaacca ggtgaccatg aagatgatat
     3721 ggaacgcctt gatccaaagc atcgatgacc tcggatagag aaagatttaa aaatataaaa
     3781 atacgcttgt tcaaaccatc atgtctatta gcccaaagac caaaaaggtg actgcctggg
     3841 ccctgtatga ttgggccaac tcgggcttcg ccaccacggt gatggccggg ttcttcccgg
     3901 tcttcttcaa acaatactgg agcgccgaga gcgaggccgg cgtgagtacc ctgcaactgg
     3961 gtctgggcaa ctccctggca agcctgctcg tggtatttct atcccccata ctcggcgcga
     4021 ttgccgataa gggcagcgct aaaaagaagt ttcttttgtt tttcaccttt ctcggggtcg
     4081 caaatacagc cctcctttat cttgtggcca ggggcgagtg gcagatcgcc attgggctct
     4141 acgcgcttgc catgatcggt ttcttgggcg gactgacctt ctacgatgcg ctgctggtga
     4201 gcgtcgccga aaaacatgaa ctgcaccgga tctcggcctt gggatatgcg ctcggatacc
     4261 tgggtggagg actcttgttc accttcaatg tggtcatggt gcaatggcct gaggtcttcg
     4321 gtttacagga t
//
LOCUS       DASQSL010000865         1265 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_184028, whole genome shotgun sequence.
ACCESSION   DASQSL010000865 DASQSL010000000
VERSION     DASQSL010000865.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1265)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1265)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1265
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184028"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(93..461)
                     /locus_tag="VE844_08875"
     CDS             complement(93..461)
                     /locus_tag="VE844_08875"
                     /inference="COORDINATES: protein motif:HMM:NF025063.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HZC01458.1"
                     /translation="MAVTRQLPHGARGQALSLMCDNGCQPTSAAFMKACSALGVRQAF
                     TSDNNPQGKADTERVMRTLTEECLWLKEWTRPFELSRALDGWIADYHAHDRHSALGYK
                     TPEPFERDDHNSHSPPFVAA"
     gene            complement(531..734)
                     /locus_tag="VE844_08880"
     CDS             complement(531..734)
                     /locus_tag="VE844_08880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01459.1"
                     /translation="MVHKKRMLRLMREHPWVVPAHLKLQAKRTPKKSNPRPSQPHEWW
                     GIDMTKVLVEGFGWVYSVVVLEW"
     gene            complement(866..1141)
                     /locus_tag="VE844_08885"
     CDS             complement(866..1141)
                     /locus_tag="VE844_08885"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01460.1"
                     /translation="MHRGTWEAHTKAKIVLQGLQGKPVAEICHEYQISQSLDSQWRDQ
                     FLAHASQTFESHQQTRKETRLERENARLKTLVGELRLEFKKSDEGLG"
BASE COUNT          228 a          399 c          362 g          276 t
ORIGIN      
        1 cgatcccaga tgtcgaacac tcttgcggac cagctttgag gcctgggcgt ccggctctca
       61 cgcagtagcg ctgctgtact gctccccgtg tgtcaagcgg ccacgaacgg aggactgtgg
      121 ctattgtggt cgtctcgctc aaacggctcg ggcgttttat agcccaaggc agaatgccga
      181 tcatgcgcgt gataatctgc aatccaaccg tcgagtgccc ggctcagctc gaaggggcgg
      241 gtccattcct tcagccacag gcactcctct gtgagggtac gcatgaccct ctccgtgtca
      301 gccttgcctt gtgggttgtt atcgctggtg aaggcttgcc gcacccccaa agcgctgcag
      361 gccttcataa aagccgcaga agtcggctgg cagccgttgt cgcacatcag cgaaagcgct
      421 tgcccccgcg ccccgtgagg aagttgccga gtgaccgcca tatccaaagc tgccagccat
      481 ggcggcgctg tgcacggcgt gcccgcctag tcgccgacga ttttttggct ctaccactcc
      541 aacacgacca cgctgtagac ccagccgaag ccctccacca acaccttagt catgtcaatg
      601 ccccaccact catggggctg gctcggtcgg gggttgctct tcttcggcgt ccgcttggcc
      661 tgcagcttca ggtgggccgg gaccacccag gggtgttctc gcatcaggcg cagcatgcgc
      721 ttcttatgga ccacgaggtg ctcgacgaag cgccggtacg ccccgatgct ccgatacccc
      781 cagactgggt gttcggcctt cagccgctgg atatgcggaa gcagggctgc agcacgctgg
      841 atgaccggac cagatctgag ccgcttcagc ccagcccctc gtcgcttttt ttgaactcca
      901 ggcgtaactc cccgacgagt gtcttcagcc tagcgttctc gcgttcgaga cgggtttctt
      961 tccgagtctg ctgatggctc tcaaaggttt gagaagcatg ggcgagaaac tggtcgcgcc
     1021 attgggaatc cagggattgg ctgatctgat actcatggca gatttcggct acgggcttgc
     1081 cctgcaagcc ctgcagcacg atcttggctt tcgtgtgagc ctcccaggtg cctcggtgca
     1141 tggctgacct cctcggttgt cagccacagt gtactctgtt ccgacgccct atgtcttaac
     1201 ggggtgcagt atacctaccc tacgtacaca tgaggtcaga aatagtgcaa cgactattga
     1261 acgac
//
LOCUS       DASQSL010000866         4653 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_184036, whole genome shotgun sequence.
ACCESSION   DASQSL010000866 DASQSL010000000
VERSION     DASQSL010000866.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4653
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184036"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            193..1503
                     /locus_tag="VE844_08890"
     CDS             193..1503
                     /locus_tag="VE844_08890"
                     /EC_number="1.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018231339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004412 - homoserine dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HZC01461.1"
                     /translation="MKPIQVGLLGLGTVGSGTVGVLWRNADEITRRAGRAIQITQAAV
                     RDLGKERSFPLEVIEITGDSYAVVDNPKVHIVIELIGGLEPARELVLRAIATGKHVVT
                     ANKALIAIHGNAIFKAAQQQGVMVAFEAAVGGGIPIIKTLREGLTGNRIEWLAGIING
                     TGNFILTEMRERGRDFAEVLREAQQLGYAEADPSFDIEGIDAAHKLTILAAIAFGIPL
                     QFDKVYTEGISKVTQADISYAEQFGYRIKHLGIARNSGKSIELRVHPSLIPERQLLAN
                     VNGVMNAVLIKGDAVGPTLYYGAGAGAEPTASAIVADLVDVVRALTSDPENRVPHLAF
                     QPDALSDLPVCTMEDIKTAYYLRMNAIDRPGVLADITRILGDLQISIEAILQKEPLAG
                     ERHVPIILLTHRVRERAMNTALARIEALQSIKGPVTRIRLETLE"
     gene            1569..2654
                     /gene="thrC"
                     /locus_tag="VE844_08895"
     CDS             1569..2654
                     /gene="thrC"
                     /locus_tag="VE844_08895"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009727442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HZC01462.1"
                     /translation="MLYRPRYTGLIERYRDRLPVRDDTRIISLGEGNTPLIRLNNIPR
                     LSKKEVDIYAKYEGLNPTGSFKDRGMTLAVTKAVEEGSRAIICASTGNTSASAVAYAA
                     RAGITAFVLIPEGKIALGKLAQAMMQGAVVIQINGNFDAGMQLVKEIAGRAPVTLVNS
                     INPYRLQGQKTAAFEIIEGLGRAPDYHCIPVGNAGNISAYWMGYCEYFHYGLANNRPR
                     MCGYQASGAAPLVRGHKIADPETVATAIRIGNPQSWDKALRAQEESGGWFDEFTDEEI
                     LATQRLLAEKEGIFCEPASAIALAGAMRDIASGRIPEGSVVACTLTGHGLKDPDIAVK
                     QSMAPVIRIEATLDHVERAIMKHIKKK"
     gene            complement(2711..4111)
                     /locus_tag="VE844_08900"
     CDS             complement(2711..4111)
                     /locus_tag="VE844_08900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC01463.1"
                     /translation="MLNSIRGIALVQLKSLLRGFLQECSLPFGSVLTAKEGVAMIREE
                     LVETCDRIFTPLVTLCTFLSQIHSDDPSCRAAVARLNAARVGQGLAPGSPLTGGYCQA
                     RKRLPESLLQRLLGLSGQRLEQQVSKTWHWHGRAVKIVDGSGVSMPDTPENQGAYPQP
                     GSQAAGLGFPVARLVVVLSLACGAVLGAALGRIKGKQSGENMLFHSLHEPLDRDDVVL
                     ADRYYCSYWEVAVLLGRGVDVVMRLHQRRPVDFRRGQRLGHEDHVVTWTKPACPDWMD
                     AVTYAALPATLKIRELRVRVIQRGFRTRVLVVATTLLNAQDFTREELAGLYRARWHAE
                     LDLRSIKQTLKMDVLRCKTPAMVRKELWGHLLVYNLIRAAMAQAALSQGVSPRQLSLQ
                     GARQTLEAFRSPLGAASPAKRENIIHSVLSAIASHRVGTRPDRYEPRVRKRRPKPYPL
                     MTVPRQQARERLARAA"
     gene            complement(4287..>4653)
                     /locus_tag="VE844_08905"
     CDS             complement(4287..>4653)
                     /locus_tag="VE844_08905"
                     /inference="COORDINATES: protein motif:HMM:NF015114.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01464.1"
                     /translation="ADALGKIGPGAASAVPALIVALGSDNVRLPTRATVALGNIGAEA
                     KAAIPALVEAMEREEQEYKKNQAEAVGQIAQALAIRKDRSSLKVLRAALRAEENANLG
                     LATIGPLREAIGFLETRGP"
BASE COUNT          992 a         1367 c         1401 g          893 t
ORIGIN      
        1 gaatgaacat cgtacccgcc aggcgatccg agggatccgg gagatgctca ggcacgatca
       61 gagagtagac gcaggccggt ttgagacacg tgagatcgtg gaataaaggg gggagaagga
      121 cattgtcaag tattttcgtg aggagtggga gtgagggatg aggagtgagg atataaaagc
      181 gagggaagga cattgaaacc gattcaagtg ggcctattgg ggcttgggac ggtcggcagc
      241 gggaccgtcg gggtattatg gcgcaatgcc gacgagatca cccgccgagc cggacgcgcc
      301 atccagatca cccaggcggc ggtgcgtgat cttggcaagg aacggagttt ccctttagag
      361 gttattgaga tcacaggcga tagctatgcc gtggtcgata acccaaaggt ccatatcgtc
      421 atagagttga tcggcggtct tgaacctgcc cgggaattgg tgcttagagc gattgccact
      481 ggtaagcatg tagtgacggc taacaaagcg ctgatcgcca tccacggtaa tgcgatcttc
      541 aaggccgcgc agcaacaagg ggtcatggtg gcctttgagg ccgcggtggg gggcggtata
      601 ccgatcatca agacgctcag ggagggactc accgggaacc ggatcgagtg gctcgcgggc
      661 atcatcaatg gcaccggcaa tttcatcttg accgagatgc gggagcgggg gcgggatttt
      721 gccgaggtcc tgcgcgaagc ccaacagttg gggtacgccg aggctgatcc gagcttcgac
      781 atcgaaggga tcgatgccgc ccacaagctc actatcctcg ccgccatcgc ctttggtatc
      841 cccttgcagt tcgataaagt ctacaccgag gggatcagta aggtgaccca ggcagatatc
      901 agttatgcgg aacagttcgg gtaccggatc aagcacttgg gcatcgcccg aaactcaggc
      961 aagtcgattg aactgcgggt ccacccgagc ttgatcccag agcggcaact cctggccaat
     1021 gtgaacggtg tcatgaatgc cgtgttgatc aaaggtgacg cagtggggcc cacgctttac
     1081 tatggcgcgg gggccggtgc tgaacctacg gcctcggcga tcgtcgccga tttggtcgat
     1141 gtcgtgcgag cgctgacttc cgatccagaa aaccgggtgc cgcacctggc ttttcagccc
     1201 gatgccctgt ccgatctgcc ggtatgtact atggaggaca tcaagaccgc ttattacctt
     1261 aggatgaacg cgatcgatcg ccccggggtg ctcgccgata ttacccgcat ccttggggat
     1321 ctccagatca gcatcgaggc catcctgcaa aaggagccgc tcgcgggcga gcgccatgta
     1381 cccattatct tgctcactca ccgcgtccgt gaacgggcca tgaatacggc cctagcacgg
     1441 atcgaggcgc tccaatccat taaaggtccc gtaacccgga tccgccttga aaccctggaa
     1501 taacccccac ccctgccctc ccccttgcca agggggaggg tgagggaggg ggtgaaggag
     1561 accactacat gttataccga ccccgctata ccggactgat cgaacgctac cgcgaccggc
     1621 tgccggtccg tgacgacacc cgcatcatta gcctcggcga aggcaatacg ccgctgatcc
     1681 gcctcaataa catcccgcgt ctcagcaaaa aagaggtgga tatctatgct aagtacgagg
     1741 ggctcaatcc aacgggctcc ttcaaggacc ggggcatgac cctggccgtg accaaggccg
     1801 tggaggaggg tagccgggcg atcatatgtg cctcgaccgg caatacctcg gcctcggcag
     1861 tggcctatgc cgcgcgtgca ggtattaccg cgtttgtgct catcccggag ggcaagatcg
     1921 cactcggtaa actcgcccag gcgatgatgc agggggcggt cgtgattcag atcaacggta
     1981 attttgatgc gggcatgcaa ctcgtcaaag agatcgcggg ccgggcgccg gtcacccttg
     2041 tcaattcgat caacccctat cggctgcaag ggcagaagac agccgccttt gagatcatcg
     2101 aggggttggg acgggccccc gattatcact gtatcccggt cggtaacgcc ggcaatatca
     2161 gcgcttactg gatgggttat tgtgagtatt tccactatgg cctcgccaac aaccggccac
     2221 ggatgtgtgg ctatcaggcg agcggcgctg cacccttggt gcgcggacat aagatagcgg
     2281 atcctgaaac ggtggcgacc gccatccgca tcggtaaccc tcagtcttgg gacaaagcct
     2341 tgagggctca ggaggaatcg ggtggatggt ttgacgaatt taccgatgag gaaatcctgg
     2401 ccacgcagcg cttactggcc gagaaggaag ggatcttctg tgagccggcc tcagccattg
     2461 cgctcgccgg agcgatgcgg gatatcgcta gcggcaggat ccccgagggc agcgtggtgg
     2521 cttgcaccct gaccggccac ggtcttaagg accccgatat cgccgttaaa cagagcatgg
     2581 ccccggtgat caggattgag gcaacattgg atcacgtgga acgggcgatc atgaagcaca
     2641 ttaagaaaaa ataaaaaagg aagaatagag ttggaaatta cagtctgatc cgaatggcac
     2701 ttcctgagtc tcaagcggcc cttgccaacc gctcgcgggc ttgttggcgc ggcacggtca
     2761 tcaggggata aggtttgggg cgacgcttgc gcacccgcgg ttcatagcga tccgggcggg
     2821 tccccacccg atgactggcg attgcgctca gcacactgtg gatgatattc tcccgcttgg
     2881 caggggaggc tgcacccaac gggctgcgaa aggcttcgag ggtctggcgc gccccttgta
     2941 gactcaattg ccgtggcgac accccctgac tcagggccgc ctgcgccatg gccgcgcgga
     3001 tcagattata gaccagcagg tggccccaga gctccttgcg aaccatcgcg ggggtcttgc
     3061 atcgcaatac atccatcttt aaggtctgct tgatcgaacg caggtccaac tctgcatgcc
     3121 agcgtgcccg gtacagtcca gccagttcct cccgggtaaa gtcttgggca ttgagcaagg
     3181 tcgtcgccac caccagcacg cgggtacgga aaccccgctg gatcacacgg acccgcaatt
     3241 cccgtatctt tagggtagca ggtaacgcgg cataggttac cgcgtccatc cagtcagggc
     3301 aggccggttt ggtccaggtg accacatgat cctcatggcc taaccgctgg ccccggcgaa
     3361 agtccaccgg tcgccgttga tgcaaccgca tcactacatc gaccccccgc cccagcaaca
     3421 ccgcgacctc ccagtacgag cagtaataac ggtcggccag caccacatcg tcccgatcca
     3481 ggggttcatg taggctgtgg aatagcatgt tctcaccgct ttgcttgccc ttgatgcgac
     3541 cgagcgccgc gcccaacacc gcaccgcagg ccaaggacaa caccaccacc aggcgggcaa
     3601 cagggaagcc caggcccgca gcctggctgc cgggctgggg ataggcccct tggttctcgg
     3661 gcgtatccgg catcgacacc cccgagccat ccacgatctt gaccgctcgc ccatgccagt
     3721 gccaggtctt ggatacttgc tgctcaagtc gctgtccact taagcccagc agccgttgca
     3781 gcagcgactc cgggaggcgt ttgcgggcct ggcagtaacc gcccgtgagt ggcgaaccgg
     3841 gtgccagccc ctgcccgacg cgagccgcgt tgagccgggc tacggccgca cggcacgagg
     3901 gatcgtcgct gtggatttgg ctcaagaagg tgcacagcgt caccaggggg gtgaagatac
     3961 ggtcacaggt ctcgactagt tcctcccgga tcatggcaac accctctttg gccgtcagca
     4021 ctgagccaaa gggtaaggaa cactcctgca ggaaacctcg gagcagactc ttcaattgaa
     4081 ctaaagcaat gcctcggata gaattcaaca tggtaggcct ccttatcgat tggggatggt
     4141 gatacaccct cattaaaaga taagtgggcc tatcctgtat ataccttgtt ccaccaatta
     4201 atcgcagctc aggaagtgcc attcgactcc gaccccattt tttctcttcc tgttcttagc
     4261 tggctgcagg cacttgatga gcgatgctat ggacctctgg tttcaaggaa accgatcgcc
     4321 tcacgcagcg gaccgatcgt cgcgaggcca agattggcat tttcctccgc acggagcgca
     4381 gcccgaagga ccttgagcga gcttcgatcc tttcgaatcg cgagtgcctg agcgatctga
     4441 ccgactgcct ctgcctggtt cttcttgtac tcttgctctt cacgttccat cgcctcgacg
     4501 agcgcgggaa ttgccgcctt cgcctccgcg ccgatgttgc cgagggccac tgtagccctc
     4561 gtgggcaacc tcacattgtc ggacccaaga gccactatca gcgcggggac ggcggacgcc
     4621 gcgccaggac caatcttgcc gagtgcgtcg gcg
//
LOCUS       DASQSL010000867         1265 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_157686, whole genome shotgun sequence.
ACCESSION   DASQSL010000867 DASQSL010000000
VERSION     DASQSL010000867.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1265)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1265)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1265
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157686"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            261..1247
                     /locus_tag="VE844_08910"
     CDS             261..1247
                     /locus_tag="VE844_08910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012140874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HZC01465.1"
                     /translation="MSTFKIAAIQAAPVFLERDATVSKARELIAEAGRSGARLVVFPE
                     AFIPTYPDWVWRIPPGQHRMLADIYAELLEQSVEIPGPVTKELCEAARQASIYAVMGL
                     NERNAQASNASLYNTLLYIDPEGNLLGKHQKLVPTAPERMVWAQGNGSTLEVYDTSLG
                     RLSGLICWENYMPLARYSLYAWGVQIYLAPTWDNGEPWLSTLRHIAKEGRVYVVGCSI
                     AMRKEDIPDRFEFKAKYYAEVKEWINKGDSAIVSPDGKFVAGPLNAKEGILYAELDSR
                     QMNGSKWNLDVAGHYARPDVFRLTVSREDRPMISVAQSPEQELQGQAEALEG"
BASE COUNT          279 a          384 c          367 g          235 t
ORIGIN      
        1 agcacgagcg cgtagcagct agactagccc tacctcgatc tgcggatcct ggcccagcgt
       61 agccgagaag cgcaccttca gggtgtcgtc agttcgtaca gtgcaagggg aggtgcgtgc
      121 tccctacggc ttgtgtttcc aagaatcctc cttcccccag cgatggtcac tagtcctttt
      181 acacatgcac cgaggttggt caggtaccat catagtggtg cagaacgagt agttggccga
      241 acgggaagga gttgacgatc gtgtcgacct tcaagatagc tgcgatccag gcggcgcctg
      301 tgttcctcga acgcgatgcg accgtctcca aggcccgcga gctgatcgcc gaagccgggc
      361 gaagcggggc ccgcttggtg gtcttccctg aggcctttat ccctacctac ccggactggg
      421 tgtggcgcat accgcctggc cagcaccgga tgctagccga catctacgcg gagttgctag
      481 agcaatctgt cgagatccct ggccctgtca ccaaagaact ctgtgaggcc gcaagacaag
      541 ccagtatcta cgcagtgatg ggtctcaacg agcgcaacgc acaggctagc aacgcgagcc
      601 tgtataacac cctgctctac atcgaccccg agggcaacct gttaggtaaa caccagaagc
      661 tcgtccccac tgctcccgag cgcatggtct gggcgcaggg caacgggagc accctcgagg
      721 tctacgacac ctcactgggc agactgagcg ggctcatttg ctgggagaac tacatgccac
      781 ttgctcgcta ttcgctctat gcatggggtg tgcagatcta ccttgccccc acctgggaca
      841 atggtgagcc ctggctctcc accctcagac acattgccaa ggaaggacga gtgtacgtag
      901 ttgggtgttc catcgctatg cgcaaggaag acattcccga ccggttcgag ttcaaggcaa
      961 agtactacgc cgaagtcaaa gagtggatca acaaaggaga cagcgccatc gtgagcccag
     1021 acggcaagtt cgtagccggg ccactcaacg ctaaagaagg catcctctac gccgaactgg
     1081 actcgaggca gatgaacgga tcgaagtgga acctcgatgt ggccggccac tacgcgcggc
     1141 cggatgtgtt tcgcctcacc gtgagcagag aagaccgtcc gatgatctcc gtcgcccaat
     1201 caccggagca ggagctacag gggcaggccg aagcgctgga gggctaatcc ctccccactt
     1261 cactt
//
LOCUS       DASQSL010000868         1342 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_195456, whole genome shotgun sequence.
ACCESSION   DASQSL010000868 DASQSL010000000
VERSION     DASQSL010000868.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1342
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195456"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(167..1174)
                     /locus_tag="VE844_08915"
     CDS             complement(167..1174)
                     /locus_tag="VE844_08915"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase"
                     /protein_id="HZC01466.1"
                     /translation="MQSLLPTALTAVAQACQIARHIQQHIKSSNGIQKSDNSPVTIAD
                     FAVQAVVVHGLIASLGPVLIAAEECSRLLRGSEQAVRDAVVQAVRSNWKDATEDEVLA
                     AIDSGSHDATASAYWTLDPIDGTKGFLRGEQYAISLAYIERGRVLVGVMGCPNLSADF
                     NRPFSDPDPRGLIYFATCGGGSWVTEAIDPRGQTVAVKPAPSDSPQTPLRICESVEPA
                     HSKHHATARVIQTLGGCSQPARLDSQCKYAVVARGQADAYLRLPTQSDYVENIWDHAA
                     GMLIAIEAGMMVTDIDGLPLDFSQGRKLSRNRGIVCASPRYHGRIIEVIKQLDALKQI
                     S"
BASE COUNT          297 a          352 c          402 g          291 t
ORIGIN      
        1 catccggctg ccgggcaacc tcgtttggca tcgcgagact attgacacgg ctcacatcga
       61 gcttgcttgc agtggcacag ccggtgagga gcagcgttac gatagatagt agccagtggg
      121 gagacctctg gtagggtgtg attacctgca taaacgagcg gtgtgtttag gatatttgct
      181 tgagagcatc aagctgttta ataacctcga taattctccc atgataacgg ggtgaggcac
      241 aaacgatccc gcgattacgg ctaagcttgc gtccctggga aaaatccaac ggcagcccat
      301 cgatatctgt caccatcatg ccggcttcta tggcaatcaa catacccgcg gcatggtccc
      361 agatgttttc tacatagtcg gactgcgtag gtaacctcag ataggcatcc gcttggccac
      421 gtgcgaccac ggcatatttg cattggctat cgaggcgcgc aggttgagag caacccccca
      481 aggtctggat cactcgggca gtggcatggt gttttgagtg agcaggttcg accgattcgc
      541 agatccggag gggcgtttgg ggggagtcgg aaggtgcggg tttgaccgcg accgtctgac
      601 cccgtgggtc aatggcctca gtgacccagc taccaccacc gcaggtagca aaatagatga
      661 gacccctggg atcaggatcg gaaaaggggc gattgaaatc tgccgagagg ttagggcatc
      721 ccatgacgcc cacgagcacc ctgccccgct cgatataggc caaggagatc gcatactgct
      781 cgccgcgaag aaaccccttg gtgccgtcga tcgggtccaa ggtccagtaa gcggatgccg
      841 tggcgtcgtg cgaaccgcta tcgatagccg caagtacttc atcctcggta gcatctttcc
      901 agttggaccg gaccgcttgg acgacggcgt cgcgtactgc ttgttctgag cctcggagga
      961 ggcggctaca ttcctcggcg gcgatcaaga caggcccaag cgaggcaata aggccatgga
     1021 ccacaaccgc ttgtacagcg aaatcggcaa tcgtgaccgg gctattatcg cttttttgga
     1081 tcccgttgct ggacttgatg tgctgctgga tatggcgggc gatctggcat gcttgggcca
     1141 ccgctgtcag cgcggttgga agtaagcttt gcatcccata agtatagaca ctaggactgg
     1201 agctctgcta gccaggcgct gagatgcgca ggctttaagg cgccactgac ccccagccta
     1261 tgggtgtgcg gcatcgtaga aatatagatt cgttaagtga ttaacaggca ttcatcgagg
     1321 catatagtgt gtctggcaat tg
//
LOCUS       DASQSL010000869         1289 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_167947, whole genome shotgun sequence.
ACCESSION   DASQSL010000869 DASQSL010000000
VERSION     DASQSL010000869.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1289
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167947"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..215
                     /locus_tag="VE844_08920"
     CDS             <1..215
                     /locus_tag="VE844_08920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01467.1"
                     /translation="SSFRGVVEFFREVLDGPVALGSVHTNLRQAVAQVRQLNAVEDLS
                     AVRAGDHDEIFQSGQPVLVGVNRDST"
     gene            272..664
                     /locus_tag="VE844_08925"
     CDS             272..664
                     /locus_tag="VE844_08925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01468.1"
                     /translation="MGLDRQGLTARLHRGRRRQGLRAGQALAWPEVPCHGDTFHAAQE
                     LGRLCQRLDNRAYAAINACNQLERKMHKAKRHHQGQHLSKALVQTRQRQMQAIIAVAD
                     PVGTLAQWLQEDILALSRARGCYAPGAV"
     gene            988..>1289
                     /locus_tag="VE844_08930"
     CDS             988..>1289
                     /locus_tag="VE844_08930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005371427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZC01469.1"
                     /translation="MVQYTFDVLIIGSGAAGLSLALHLADRARIAVLTKGPLQESATF
                     YAQGGISAVLDTMDSIESHVEDTLAAGAGLCQRAIVQRIVECGRESIQWLIDLGVP"
BASE COUNT          269 a          344 c          395 g          281 t
ORIGIN      
        1 acagctcctt tcggggcgtg gtggagtttt tccgtgaggt gttggatggt ccagtggcgc
       61 tcggcagcgt ccatactaac ctcaggcaag cggtggcgca ggtgcgtcag ctcaatgcgg
      121 tggaagacct cagcgcggta cgcgctggcg accatgacga gatcttccaa agcggccaac
      181 cggtgctggt cggggttaat cgggattcga cctagtgcta tcggctggcg gccgaggaga
      241 gccgcgacgg tgaaacctgg gcgatccagc tgtggggctt gaccgccaag ggcttacagc
      301 ccgactacac cgtggccgac ggcggcaagg gctgcgtgcc ggccaagcgt tggcctggcc
      361 cgaagtgccc tgccacggtg atacgtttca cgcggctcag gaactgggcc ggttgtgtca
      421 gcggctggat aaccgtgcct atgcggccat caatgcctgt aaccagctcg aacgcaagat
      481 gcacaaggcc aagcgccacc atcaaggcca gcacctgtca aaagcgctgg tgcagacacg
      541 ccagcggcaa atgcaggcca tcatcgcggt ggccgatccg gtaggcaccc tggctcagtg
      601 gctccaggaa gatattctcg ccttgagccg ggcccgaggc tgctacgcgc caggcgctgt
      661 atgattttgt catcgttacc ctatcagtct cgtcctagag gctgagaacc cctactgcat
      721 gtgttaccct aatttcacgt tttttgaacc atgccctatt tattctagca aagcttttcc
      781 cttctccccc ttggaggaga gggttagaag gtttttcccc tctccccttg aggaagaggg
      841 ttaggggaag gagtaattta agttattgat tttcaaaaaa tgaccaaact tgagtatgaa
      901 aggtgtcaaa gaactcaaag cagaacccgg taaatccctg gattggcagg aacccgaggg
      961 aggcgcgggt gttgagtgag aaaatggatg gtgcagtata cgtttgatgt tttaatcatc
     1021 ggcagcggtg cggccggtct cagcctggct ttacatttgg cggatcgggc ccgcattgcg
     1081 gtgctcacca agggcccgct tcaagaaagc gccacctttt atgcccaggg aggtatatcg
     1141 gcggtgctcg acaccatgga ttccatcgaa tcacatgtcg aagatacgtt ggctgcgggt
     1201 gcaggtctct gccagcgagc gatcgtccaa cgcattgtcg aatgtggacg tgagagcatc
     1261 caatggctca ttgatctggg cgtgccttt
//
LOCUS       DASQSL010000870         1249 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_31544, whole genome shotgun sequence.
ACCESSION   DASQSL010000870 DASQSL010000000
VERSION     DASQSL010000870.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1249
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31544"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1230)
                     /locus_tag="VE844_08935"
     CDS             complement(<1..1230)
                     /locus_tag="VE844_08935"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01470.1"
                     /translation="MAGAILAPGKRTVASALRAVGLQEERRFCRYHRVLSRAVWSSRE
                     ASHVLLGLLVEAFVPEGPLVLGVDETLERRRGKTITAKGIYRDPVRSSHSHFVKTSAL
                     RWVCVVLLAEIPWASRVWAPPFLSALAPSERYAKEARQRHKSLTEWAFQLLMLVRRWY
                     PDREIVAVADSTYASLKLLDRCRRLSDPITFITRLRLDAALYEPAPPRRPGQMGRPRL
                     KGERLPNLSVVAGDPATEWTLIMVANWYGKKKRTVEVVSATAVWYSTGLPAVPLRWVL
                     IRDPKEEFRTQALLCTDLEVEPERIISWFVRRWQMEATFQEVRQRLGFESQRHWSQRA
                     IQRTAPTLLALFSLVTLFAHQPMAQGSGIVRQTAWYRKKYRTFSDALALVRKELWAQE
                     EAFCGSAQQTDTVKVPRE"
BASE COUNT          256 a          402 c          357 g          234 t
ORIGIN      
        1 ttcccgcggg acttttaccg tatcggtctg ctgcgctgac ccgcaaaaag cctcctcctg
       61 cgcccacaac tccttgcgca ccagcgctaa tgcatcggag aaggtccgat acttcttgcg
      121 gtaccacgcc gtttggcgaa cgatgcccga gccttgcgcc atcggctggt gagcgaacag
      181 agtaaccagg gagaacagag ccaacagcgt cggagcggtc ctttggattg ccctctgcga
      241 ccaatgcctc tggctctcga agcctaggcg ctgccgcact tcctgaaagg tagcctccat
      301 ctgccagcgc ctaacgaacc aggagattat ccgttcgggc tccacctcga ggtcggtgca
      361 caacagagcc tgagtcctga actcttcttt aggatcgcgg atcaataccc agcgcaaagg
      421 tactgcgggc aaacctgtgc tgtaccagac ggcggtggca gagactacct ccacggtacg
      481 ctttttcttt ccgtaccagt tggccaccat gatcagtgtc cactcggtgg caggatctcc
      541 ggcgacgacc gaaaggttgg gcagacgctc gccctttagt cgaggccttc ccatttgtcc
      601 ggggcgacgt ggcggtgccg gttcgtagag ggcagcatcc aaacgcaagc gagttatgaa
      661 ggtgatcgga tcggacagcc ttcgacagcg atcgaggagc ttcaaggaag cgtaggtgct
      721 atcggcgacg gctactatct ctcggtctgg gtaccagcgc ctcaccaaca taagaagctg
      781 gaaggcccat tcggtgagac tcttgtgccg ctggcgggcc tcttttgcgt agcgctcgga
      841 aggagccagc gctgacagaa aaggcggggc ccacacccga gaagcccacg ggatctccgc
      901 cagcaacacc acgcacaccc acctcagagc gctcgttttg acgaagtggc tgtggctgga
      961 tctaaccggg tcgcggtaga tgcccttcgc cgtgatcgtc ttgcctctcc gccgttccag
     1021 agtctcatcc acgcccagca ccagcggtcc ttcgggcaca aaggcttcca caagcaaccc
     1081 caagagtacg tgactcgcct cccggctcga ccagacagca cgactcaaga cccgatggta
     1141 gcggcagaag cgccgttcct cttgcaggcc cactgctcgc agggcggaag ctacggttct
     1201 cttgcccgga gcgagaatcg cacctgccac gagcagccga acatgctgc
//
LOCUS       DASQSL010000871         2218 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_195466, whole genome shotgun sequence.
ACCESSION   DASQSL010000871 DASQSL010000000
VERSION     DASQSL010000871.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2218)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2218)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2218
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195466"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(29..688)
                     /gene="modB"
                     /locus_tag="VE844_08940"
     CDS             complement(29..688)
                     /gene="modB"
                     /locus_tag="VE844_08940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015768609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HZC01471.1"
                     /translation="MDWAALLLSLQLAFWTCALLLPLAVLLGRWLAWSRLPGKGFVAA
                     IIALPLVLPPTVLGYYLLMAVGGDSPLGKLYQGAVGHELVFTFDGLLLASLIFNLPFA
                     VLPLHRAFEAIPSELREAAWCAGMSRLATFWRIEVPLARPGLVSAVALTSAHTLGEFG
                     VVLMVGGNIPGETRTISLAIYDRVQAFDETAAGAVSAVLLGFSLMAIGLVYRFGDRAG
                     R"
     gene            complement(697..1467)
                     /gene="modA"
                     /locus_tag="VE844_08945"
     CDS             complement(697..1467)
                     /gene="modA"
                     /locus_tag="VE844_08945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012144726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_function: GO:0030973 - molybdate ion binding [Evidence
                     IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HZC01472.1"
                     /translation="MVLIIASAIVLAGGWLNVLPAADIPAIAAASDVKFTLTEIADRF
                     REETGRTVRISYGSSGDFRRQIAQGAPFELFLSADESYVQALHEEGFTLDRGILYGLG
                     RLALYVPHGSSLTPDAELLNDLAAALKEGRLRRFAIANPEHAPYGRAAREVLVKLGLW
                     DRIQTHLVLGENAAQAVQFVISGSAQGGFIPLALALASEVSSRGRFVVVSPEWHSPLR
                     QRMVLLRNAGDTARRFYAFIQGPLARAIFERYGFVRPD"
     gene            complement(1615..2218)
                     /locus_tag="VE844_08950"
                     /pseudo
     CDS             complement(1615..2218)
                     /locus_tag="VE844_08950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020146428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="FtsK/SpoIIIE domain-containing protein"
BASE COUNT          507 a          698 c          624 g          389 t
ORIGIN      
        1 catccaccct gctgatcagt cattactctc agcggcctgc tcgatcccca aaccggtaca
       61 ccagaccgat cgccatcaac gagaacccca gcagcacggc tgacaccgcc ccggcggccg
      121 tctcgtcgaa ggcctggacc cgatcataga tggcaagcga gatggtccgg gtctcaccgg
      181 ggatattgcc gcccaccatc aacaccaccc cgaattcccc caaggtatgg gcagaggtga
      241 gcgccacggc ggagaccaga ccgggccggg cgagtggcac ctcgatccgc caaaaggtcg
      301 caagccgaga catcccggcg caccaggccg cttcgcgtag ctcgctaggg atagcttcaa
      361 aggcccggtg cagtggcaaa acagcgaagg gaagattgaa gatcagcgaa gccaacagca
      421 agccatcgaa ggtgaatacc agctcatgcc caaccgcccc ctggtatagt ttgcccagcg
      481 gcgaatctcc gccgacggcc ataagcagat aataaccgag caccgtaggc ggcaggacca
      541 gcggcagggc gatgatggcg gccacaaacc ctttgccagg gagcctgctc caagcgagcc
      601 agcggcccaa aagcacggcg agcggcaata acagagcgca ggtccaaaag gcgagctgca
      661 aggagagcag gagggccgcc caatccatcg gcttgcctaa tccggccgca caaacccgta
      721 gcgctcaaag atggcccgag ccaggggacc ctggataaaa gcataaaaac ggcgcgctgt
      781 atcccccgca tttctcagca gcaccatccg ctgtcgcaaa gggctatgcc actcaggaga
      841 taccaccaca aagcgacctc ggctcgatac ctcggacgct aaagccagcg ccagggggat
      901 aaatcccccc tgcgccgagc ctgaaataac gaattgcacg gcttgggcag cgttctcgcc
      961 gagcaccagg tgggtttgga tcctgtccca aaggccaagc ttcaccagga cctcgcgcgc
     1021 cgcccggcca tagggtgcgt gctcggggtt ggcgatagcg aatcgcctga gcctgccttc
     1081 cttcaatgcg gctgccagat cgttaagaag ttccgcatcc ggggtgagtg aggagccgtg
     1141 cggcacgtac agggcaagcc gtcccaggcc atagagtatc cctcgatcca gggtaaaacc
     1201 ctcctcgtgc aaggcctgca catagctctc atccgccgag agaaacagct caaagggcgc
     1261 accttgcgcg atctggcgtc taaaatcgcc tgaagagcca taactgatgc gaaccgttct
     1321 ccccgtctct tctctaaagc gatccgcgat ctccgtcagg gtaaatttga catcggaggc
     1381 cgcggcgatc gccgggatat cggcagcagg cagaacattt aaccagccac cggcaaggac
     1441 tatggccgac gcgatgatca aaaccatacc tttgagcata ggacccgatg ggcacaatta
     1501 catcttggct tgatgtgctc ccagcttagg aggttaatct tttggaggcg gcggcgctaa
     1561 tacgccccgg cccgtatccg ccaggtcttc tatcggtttg gccaggtctt ctatcggttc
     1621 ggccaggact tcctccctat agtcgggtat accctggctc ttcaagtatt ccactacttt
     1681 gtgtacctcc tgatcggaca cgaaggcccc ctgcacccgg gtaggcacac cggtccctgg
     1741 cggtaaatag agcatatcac cgtgacctaa gaggttctcc gcgccgttct gatccaaaat
     1801 ggtgcgggaa tccacccggg aggagacctg aaaagcgatg cggcttggaa tattggcctt
     1861 gatcaagccg gtgatcacat cgacggaagg gcgctgggtc gcgaggatca aatggatgcc
     1921 tgaagcacgc gcattctggg cgaggcgggt gataagatct tccaccttct tgcccacggt
     1981 catcatcata tccgccagtt catcgatgat aacgacgatg tagggcagcc tgctcaggag
     2041 ctccgctggt tccaccgtat cagcgatggg gttcatgagc ggccggccct ggtggatagc
     2101 ttcttccacc gtgtggttat agccgccgat attgcgcacc ttgagcgccg ccatcagctg
     2161 ataacgacgt tccatctcct ccacacacca gcgcagcgca ttggcggcat ccttcata
//
LOCUS       DASQSL010000872         1326 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_7057, whole genome shotgun sequence.
ACCESSION   DASQSL010000872 DASQSL010000000
VERSION     DASQSL010000872.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1326
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7057"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1326)
                     /locus_tag="VE844_08955"
     CDS             complement(<1..>1326)
                     /locus_tag="VE844_08955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017875656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HZC01473.1"
                     /translation="GFTLPGRDLIVEAGVVELIGRDSSTGGETGWPEAPARSRPLQPV
                     ALVSLYTAAQKYETPLYLRTELQSGDRIEGPAIIIETNATTVVEPGWQAQITPKHHLL
                     MSRLQPLPRRMSVATDVDPVRLEIFNNLFMAIAEQMEVVLANTAHSVNIKERLDFSCA
                     VFDSQGQLIANSPHIPVHLGSMGGSVQSIIRANRGDIWPGDVYALNTPYNGGTHLPDI
                     TVVTPVFDKAGGQILFYVASRGHHADIGGLTPGSMPPHSRTIHEEGVLIDNFKLVDRG
                     EFCEQAVRKLLAFGLYPARNPDQNIADLKAQIAANAKGAAELRRMVRHYGLEVVYAYM
                     GHVQDNACEAVRRVIERLRDGCFTYELDNGSQIHVAITVNQKRRTARIDFTGTSPEQP
                     SNFNAPAAVTTAAVLYVFRTLVDEDIPLNAGCLRPLEILLPEGSMLNPR"
BASE COUNT          282 a          381 c          390 g          273 t
ORIGIN      
        1 tagcgggggt tgagcatcga cccctcgggc aggaggatct caaggggcct aagacagcca
       61 gcattgagcg gaatgtcctc gtccaccaag gtacggaaca catagagcac cgcggctgta
      121 gttactgcgg ccggggcatt gaagttcgag ggctgctcgg gcgaggtccc ggtgaaatcg
      181 atccgggcgg tgcgcctctt ctggttgacc gtgatcgcca cgtggatctg gctgccattg
      241 tccagctcat aggtaaaaca gccgtctcgg agccgctcta tgactcggcg cacggcttca
      301 caggcgttat cctgaacatg ccccatgtaa gcgtagacca cctccagacc ataatgcctg
      361 accatacgcc tcagttccgc tgcacccttg gcattggcgg cgatctgggc cttgagatcg
      421 gcgatatttt ggtcgggatt gcgcgcggga tagaggccaa aggcgagcag ttttctcacc
      481 gcctgctcgc aaaactcccc gcgatccacg agcttgaagt tatcgatcag cacaccctct
      541 tcatggatcg tgcggctatg gggtggcatc gagcccggtg tgagcccgcc gatatcggca
      601 tgatgaccgc gggaagcgac ataaaagagg atttgaccgc ctgctttatc gaataccggg
      661 gttactaccg tgatatccgg tagatgtgtg ccgccgttgt agggcgtgtt cagggcatag
      721 acatccccgg gccagatatc cccacgatta gcacggataa tcgattgcac ggatccgccc
      781 atggatccca aatgcacagg gatatgagga gaattggcga taagttgtcc ttgcgagtcg
      841 aatacggcgc aggaaaaatc caggcgctcc ttgatattca ccgaatgggc ggtgttggca
      901 agcaccacct ccatctgctc ggcgatcgcc atgaacagat tattgaagat ctcaagcctt
      961 acgggatcta cgtcagtagc tacagacata cgtctcggta aaggctgcaa tcggctcatc
     1021 agcagatgat gcttgggcgt gatctgcgcc tgccagcccg gttcgaccac ggtggtggca
     1081 ttggtctcga tgataatggc cggaccctcg atgcgatcgc ccgactgcaa ctctgtccgc
     1141 aggtacagcg gagtctcata tttttgcgca gccgtataca gagaaaccag ggccacaggc
     1201 tgcaagggtc tgctgcgcgc tggcgcctcc ggccatcccg tctcaccgcc tgtggaggag
     1261 tccctaccga tgagctccac cacgcctgct tcaactatga gatcccggcc aggcagggtg
     1321 aagcca
//
LOCUS       DASQSL010000873         1965 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_47204, whole genome shotgun sequence.
ACCESSION   DASQSL010000873 DASQSL010000000
VERSION     DASQSL010000873.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1965)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1965)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1965
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47204"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            171..1778
                     /locus_tag="VE844_08960"
     CDS             171..1778
                     /locus_tag="VE844_08960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004075397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01474.1"
                     /translation="MGERIQIPDIPEEARTPLVKGLVAIIEQLVQKVRQQEEKIAQLE
                     DEIAVLKGEKKRPRFKPSQLDKKAGREEGALGEGKRPGSEKRSKTASLVIHEEKVIAP
                     AEPVPEGSRFKGYRDVVVQDLVIRAHNTRYRLERWETPDGGTLMGELPVAVRCGHFGV
                     TLVSYIVYQHHHCPVTQPLVLEQLHEWGIDISAGQIEALLTGKHEPFHEEKDALLPAA
                     YACASYLTVDDTGARHRGQNGYTTHIGNELFAWFGSTKSKSRINFLQLLRGGHEDYRV
                     DEEALAYMQGQKLPQGLLERLRTPSEWLFTGEARWNTHLTRLGITQERHHRIATEGAL
                     MGSVLHHGFPKELPLVSDDAGQFRVLCHGLCWVHAERLIHTLVPLNPTHRQGLAAVRS
                     QLWELYADLKAYKAHPSPEQKIDLEARFDALFTTQTSFETLNQTLRRIHRNKAELLLV
                     LDRPDIALHTNGSERDLRDPVKKRKVSGGTRSDLGRRCRDTFMSLKRTCRKLGVSFWQ
                     YLTDRLSHTYAIPPLPDLIQQRAAPSH"
BASE COUNT          440 a          501 c          618 g          406 t
ORIGIN      
        1 tccgcgctta actgcacggg aatgacgttg taatcaggct tggaagcggt ttcaagttgt
       61 ttactcagca tttggtttcg tcctgtgatg aagatagaaa tcaggtagct tctcaaaaag
      121 ccggggcagg gaggtagaca gtgggtgtgc ctcggtggca cagtaaggcc atgggagaac
      181 gaattcagat accggacatt cccgaggaag cacgaactcc tctggtgaag gggttggtgg
      241 ccatcattga gcagttggtg caaaaggtcc ggcaacaaga agagaagatt gcgcaactgg
      301 aagatgagat tgcggtgctc aagggagaga aaaagcgacc acgattcaag cccagtcagt
      361 tggataagaa agcgggccgg gaggagggtg ctttggggga gggcaaacgg ccggggtcgg
      421 agaagaggag caagacggcg tcgctggtga ttcacgaaga gaaggtgatt gcgccggctg
      481 agccggtgcc cgaggggtcg cgcttcaagg gctaccgtga cgttgtggtg caggatctgg
      541 tgatccgggc tcacaacacg cgttatcgtc tggagcggtg ggagacgccg gatggaggta
      601 ccctgatggg agaattgccg gtagcggtga gatgtgggca ttttggggtg acgttggtca
      661 gctacattgt gtatcaacac catcactgcc cggtcaccca accgttagtg ttagagcagt
      721 tgcatgagtg gggcattgac atttcggcgg ggcagatcga ggcgttgctg acgggcaagc
      781 acgaaccttt ccacgaggag aaggacgcgt tgttgcctgc ggcttatgcc tgcgcgagct
      841 atcttaccgt tgatgacaca ggcgcgcgcc atcgaggcca gaatggctac accactcaca
      901 ttggcaatga gttgtttgcc tggtttggga gcaccaagtc gaagagtcgg atcaactttc
      961 tgcaactgct gcgcgggggc catgaggact accgggtcga tgaagaagcc ttggcgtata
     1021 tgcaggggca gaagctgccc caggggctgc tggaaagact acggaccccc tcagagtggc
     1081 tctttaccgg tgaggcgcgc tggaacaccc atctgacccg gttagggatc acccaggagc
     1141 ggcatcatcg cattgccacc gagggcgccc tgatgggcag tgtgttgcac catggcttcc
     1201 cgaaggagtt acccctcgtc agcgacgatg ccgggcagtt cagggtcctg tgtcatggcc
     1261 tgtgttgggt tcatgccgag cggctcatcc atacgctcgt tcccctcaac ccgacacacc
     1321 ggcaagggct cgccgcggtg cgcagtcagc tctgggagct gtatgccgat cttaaggcct
     1381 acaaagcgca tccttcgccg gagcagaaaa tcgacctgga agctcgcttt gatgccctct
     1441 tcaccaccca gacgagcttt gagaccctga atcaaacact ccgacggatc catcgtaaca
     1501 aagcggagtt actgttagtg ctggaccggc cagacattgc gctacacacc aatgggagtg
     1561 aacgggatct tcgcgatccc gtcaagaaac gcaaggtcag tggcgggacc cgaagtgacc
     1621 tggggcggcg ctgtcgagat accttcatga gcttgaagcg gacgtgtcga aagctcgggg
     1681 tctccttttg gcagtacctg accgatcgac tatcccatac ctacgcgatt ccgccactcc
     1741 ctgacctcat tcagcagcgg gctgctccta gccactgaat gccccgcctt attgagaagt
     1801 tacattgaac tgaccggcat catcactgac gatgacgagc gtttcgagaa gtcctccctg
     1861 gcgtagcacc cctaacaagg ctccttccgt agcaatgcgg atagggcgct tagtggtgat
     1921 gttatagact gctgcattaa taggtttagt tctcatggta taaag
//
LOCUS       DASQSL010000874         1358 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_144050, whole genome shotgun sequence.
ACCESSION   DASQSL010000874 DASQSL010000000
VERSION     DASQSL010000874.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1358
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144050"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            121..1242
                     /locus_tag="VE844_08965"
     CDS             121..1242
                     /locus_tag="VE844_08965"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC01475.1"
                     /translation="MLRISLTATEQAELEHTFKTTSDRRLRDRCQAVLMASRGRKRKA
                     IAQDLGVHRTTVRHGLNQYCQGGVVGVQIQWAPGQAGHIPETLAPTLQKWVKEGPQSC
                     GLDRANWTYEELAAHLYRTTGIEVKRTAMRVFCQRHDIRPYRPTYRYLRGDPEAQRAA
                     RQELEALKKRAQQGEGVLLSQDEARFPLVPTLRATLGVKGHRPTVGTWDNQDQVYCVA
                     ALNVVTGQLTTRLLEPHAPSKAKMGQSKQQRLQATFALHLRDIARAYPARQYPEVVII
                     IDHAPWHRGALMEQVLQEHPHLRLKRLPSYSPQLNVIERLWRVLRRRATHNRLFASMA
                     VLRATLRNNICYFQTMKHKVLSLVESPRKAKKEAKLAAA"
BASE COUNT          297 a          389 c          406 g          266 t
ORIGIN      
        1 tgccgactct ctccgccttc agtcatacga ccgactcata caaacggcgg gtgatgttgc
       61 atctttttta gggtatccta tagcagttgt cttatgacct tgcgataggg agctaaaaaa
      121 gtgctgcgga taagcctaac cgctacagaa caagcagaac tggaacacac cttcaagacg
      181 acctccgacc gacgtctgcg cgaccggtgc caagccgtat tgatggctag tcgaggccgc
      241 aagcgcaaag cgattgccca agatttgggg gtacatcgca ccacggtccg ccacgggctc
      301 aaccagtatt gccaaggcgg tgtggtgggc gtacagattc agtgggcccc ggggcaagcg
      361 ggccacattc ccgagacctt ggccccaacg ctccaaaagt gggtgaaaga aggcccgcag
      421 agttgtggcc tcgaccgcgc caactggacc tatgaggagt tagcagcgca tctctatcgc
      481 accaccggca tcgaggtgaa gcgcacggct atgcgggtgt tctgtcagcg ccatgatatt
      541 cgaccgtatc ggccgacgta tcgctatctg cgtggcgacc ccgaggcgca gcgcgcggcg
      601 cgccaagagc ttgaggcgtt aaaaaaaaga gcccagcagg gtgagggcgt gttgctgagt
      661 caagatgaag cccgctttcc cctggtgccg accttacggg ccacgttggg ggtgaagggc
      721 catcgtccca ctgtgggcac gtgggataac caggatcagg tctattgtgt ggccgccctc
      781 aacgtggtga cggggcagct cacgacacgc ctgctcgagc cgcacgcgcc cagcaaagcg
      841 aagatgggcc agagcaaaca gcagcgtctg caagcgacgt ttgcgttgca cctgcgcgat
      901 atcgctcggg cttatccggc tcgtcagtat cctgaggtcg tcatcatcat cgatcatgcc
      961 ccctggcacc gtggcgcttt gatggagcag gtgttacagg aacatccgca tctgcggttg
     1021 aagcggctgc cgagttacag tccacagctc aatgtcattg agcgcttgtg gcgggtgcta
     1081 cgccgccggg cgacgcacaa tcgcttgttc gccagcatgg cggtgttacg ggcgacgctg
     1141 cggaacaaca tctgttactt tcaaaccatg aaacataagg tgctctcgtt ggttgaaagt
     1201 ccgcggaagg cgaaaaaaga agcaaaatta gccgctgcat gaatcagtat gcccacgcgc
     1261 acgacgaccg gcattgccat catagtcctc cacaactagg tctttgctac ggggtctgcg
     1321 cgtgcgtggg ttgcgggaat ccaccacctg tacattct
//
LOCUS       DASQSL010000875         2096 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_21229, whole genome shotgun sequence.
ACCESSION   DASQSL010000875 DASQSL010000000
VERSION     DASQSL010000875.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2096
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21229"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(88..363)
                     /locus_tag="VE844_08970"
     CDS             complement(88..363)
                     /locus_tag="VE844_08970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01476.1"
                     /translation="MNQRRVAQKSRALLVPLPLNAPALEKAVRGYLPQAKLSIHLIGP
                     YYGIIPEMERSRSNVCMQLDLAAERCGDPNFSRLIWMPLGLKLEARR"
     gene            792..1433
                     /gene="lolA"
                     /locus_tag="VE844_08975"
     CDS             792..1433
                     /gene="lolA"
                     /locus_tag="VE844_08975"
                     /inference="COORDINATES: protein motif:HMM:TIGR00547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008320 - protein transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HZC01477.1"
                     /translation="MSITLFRYMLVTLFSLLTAADIQAGEGRARLDRYFSDFVTLQAR
                     FEQTLVDENGKALERSQGTVYLWRPGRFRWDYEAPYEQSIVADGKKVWIYDKDLAQVT
                     VKPLEAALGNTPALLLDNRADIDKGFTVVESGEAGSLVWLALKPKDQETHYATIRLGF
                     DASALRLMELRDNFGQTTRIRFSKEQRNAKFKHSLFGFTPPPGVDVLDAAGDS"
     gene            1463..>2096
                     /locus_tag="VE844_08980"
     CDS             1463..>2096
                     /locus_tag="VE844_08980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008289819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZC01478.1"
                     /translation="MNRATRGENLTVGKDSRPLADRMRPEHIAALVGQEHLLGAGKPL
                     RVAIESGRLHSMVLWGPPGTGKTTVARLLAQQCHAQFLTLSAVLAGVKEIRAAIDRAQ
                     LAREAEARATVLFVDEVHRFNKSQQDAFLPFVEDGTLTFIGATTENPAFELNNALLSR
                     VRVYVLKPLAASQIRTLIDAALEDVERGLGNRPLMMEPRLRDRLAEIADGD"
BASE COUNT          446 a          575 c          601 g          474 t
ORIGIN      
        1 atttggtatc atcgtaatcc tgtttatcgc agatcaaacc cggcttgggc actgcgctgc
       61 aattcgtcaa tcaatgcttg ctgccgctca tcgtctggct tcaagcttca atcccagcgg
      121 catccagatc aagcgcgaaa aattcgggtc accgcagcgc tccgccgcga gatcgagctg
      181 catgcacacg ttggaacggc tgcgttccat ctcagggatg atgccgtagt acgggccgat
      241 caagtgaatc gagagtttgg cctgtggtaa atagccgcgc acggctttct ccagagccgg
      301 ggcgttcagc gggagcggaa cgagtaaagc cctcgacttc tgcgcgacac gacgttgatt
      361 caagatagcg cggcgacatc actgcaacaa aaattgcagt ctctgccagc gtttctttga
      421 tctcgtcgtt gaatacttcg ttgcctctca gcttgcgatc acgccaaatt ttcggcgttc
      481 tgcccaaacg ctttgacaaa ctgatttcta gcctctcgtt actggggcac acagcgaaga
      541 aacatctttg gattatggct gcatagaggc cacagatccg gcgagataag caagcagcat
      601 gcgcacctga gtggcgccag ctatagaccc gatcattggc caatccctca agcctggcca
      661 aggtcctggg aattatcggt tggatctcta cagaaaattg cgtcccgctt atgtcttacg
      721 cactccaaaa acattaagat aatagtctcc ttttgatttt atcggatgta ttcccgaacg
      781 atcgactttg tatgagcatc accctgtttc gttatatgct ggtaaccctc ttcagtctac
      841 tcaccgctgc agatatacag gccggtgaag gcagggcgcg tctggatcgc tatttctcgg
      901 attttgtgac cttgcaggcc cgctttgaac agacgctcgt cgatgagaac ggcaaggcgc
      961 tggagcgctc ccagggtacg gtgtatctct ggcgccctgg cagattccgc tgggattatg
     1021 aagcgcccta tgaacagtcc atcgtggccg atggaaaaaa ggtgtggatc tacgataaag
     1081 acctcgcgca ggtcaccgtc aagccgctgg aggccgcctt gggcaatact ccggctttgc
     1141 tcttggataa tcgggcggat attgacaaag ggttcaccgt ggttgagagc ggagaggcag
     1201 gcagtttggt ctggctcgca ttgaaaccca aagaccagga gacccactac gcgaccatac
     1261 gtctggggtt tgatgcctcg gcgttgcggc tcatggaact gcgggataat tttggccaaa
     1321 cgacccggat ccgcttctct aaagaacagc gtaatgccaa gttcaagcac tcgctgtttg
     1381 ggtttacccc cccgccgggg gtggatgtcc tggatgcggc cggcgattct tgaaccatcg
     1441 cgttccggta tagcctgggc ctatgaatag ggcgacacgc ggtgagaacc tgactgtagg
     1501 caaggactca agaccgctgg ccgatcgcat gcgcccggaa catatcgcgg cgctggtggg
     1561 gcaagaacat ctgctgggtg ccggcaaacc cttgcgcgtg gccattgaat cggggcgcct
     1621 gcattccatg gtgctgtggg gaccgccagg gaccggcaaa accacggtgg cgcggttgct
     1681 ggcgcaacag tgccatgctc agtttcttac gctatcggcg gtattggcgg gcgtcaagga
     1741 gatccgggcc gccatcgacc gagctcagct ggcccgtgag gcagaggcgc gggccacggt
     1801 gctgtttgtc gatgaggtgc atcgtttcaa caaatcccaa caggacgcct tcctgccgtt
     1861 tgtcgaggat ggcaccctca cgttcattgg cgctaccaca gagaaccccg cctttgaatt
     1921 gaataacgcc ttgttatccc gggttcgcgt gtatgtgctg aaacctttag ccgcaagcca
     1981 gatccgtacg ctcatcgatg cggctttgga ggatgtagag agaggtctgg gtaaccgtcc
     2041 cctcatgatg gaacctcggc tacgcgatcg gctggccgag atcgccgatg gcgatg
//
LOCUS       DASQSL010000876         1290 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_144077, whole genome shotgun sequence.
ACCESSION   DASQSL010000876 DASQSL010000000
VERSION     DASQSL010000876.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144077"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..454
                     /locus_tag="VE844_08985"
     CDS             <1..454
                     /locus_tag="VE844_08985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01479.1"
                     /translation="VAQGLRELLEEDNQQSVANTLKHMEQLMGSLTTQASAFQENNTH
                     VTTVLENTARLSQGLPTLIQHATQSVGAMDQTVKTIDHAVHNFNRLITDTRQDLSRFS
                     REGLAQAGPLLVELRQLSETLRRLGRDLQKDPDVLLFGRPAVPPGPGE"
     gene            457..1080
                     /locus_tag="VE844_08990"
     CDS             457..1080
                     /locus_tag="VE844_08990"
                     /inference="COORDINATES: protein motif:HMM:NF015823.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-type transport auxiliary lipoprotein family
                     protein"
                     /protein_id="HZC01480.1"
                     /translation="MRRLAAGLLSLSLSACASLPGQMNREPVRTYVLAVEVPVVQSLS
                     PPSGPKVLVSLPEAWPAYGSPRIAYVKRPHEVNYYAYSEWADTPPRMLEPLLIRVLES
                     SGQFSGVLSASSSAVASLRLDTEVVSLHHEFYTNPSQGRAVIRAQLIDSATGRVLGTK
                     TFHALTPAATEDPYGGVKAMSQSLRRVLDEIVVFCVGAARDAGALTP"
BASE COUNT          296 a          353 c          370 g          271 t
ORIGIN      
        1 cgtggctcag ggtttgcgag aattgcttga ggaagacaat caacaatcgg tggctaatac
       61 cttgaaacac atggagcagc tcatgggatc actgaccacg caagcgagcg cttttcagga
      121 aaacaacacg cacgtgacca cggtcctgga gaatacggcc cggctcagtc aaggattgcc
      181 cacgctgata cagcacgcca cccagagtgt cggggctatg gaccagacgg tcaaaaccat
      241 cgatcacgct gtacacaact tcaaccggct gatcaccgac acccgccagg atctttcacg
      301 gttctcgcgg gagggcctgg ctcaggcagg gcctttactg gtagagctga gacagctgag
      361 cgagacctta aggcgcctgg gccgggacct tcagaaggat cctgatgtcc tcttgtttgg
      421 ccgcccggcg gtacctccag gacccggaga ataggcatgc gaagattagc tgcagggctc
      481 ctgtcgttat cgctcagcgc ctgtgcctcg cttcctggcc agatgaacag agaaccggta
      541 cgaacctatg tacttgctgt agaagtgccg gtggtgcaga gtctgtcacc cccgtcaggg
      601 ccaaaggtac tggtatctct gcctgaggct tggccagcgt atggttcgcc gcggatagcc
      661 tacgtaaagc ggccccatga ggtgaattac tatgcctaca gcgaatgggc ggatacgccc
      721 ccgcgtatgc tcgagccgct attaatcagg gttttggaga gcagtggcca gttcagtggg
      781 gtcctgtctg catcaagcag tgcggtggcc agcttgcgtc tggatacaga ggttgtcagt
      841 ctgcaccatg aattttacac caatcctagc cagggacggg cagtgatccg cgctcagctc
      901 atcgattcgg ccaccggccg tgtgcttgga acaaaaacct tccacgcgct cacacccgcg
      961 gctaccgaag atccttacgg tggagtgaag gcgatgagcc agtccttaag acgtgtgctc
     1021 gatgagatcg tggtcttttg tgtcggtgca gccagagatg caggtgcact caccccctaa
     1081 actgatatcg aacacatgaa caacctagca tttccaggta tgcgtatgag aagcccaaag
     1141 aataagtgga gttggtgacc cggaaaataa tccccaagat ctgggaacgc tgcttggaaa
     1201 ggtgctgcgt tatgaacacg atctggggtg ctcggtcatc gggttttatc gttatcgcgg
     1261 tacccaactc ccgcatcatt acggcatcta
//
LOCUS       DASQSL010000877         1274 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_144090, whole genome shotgun sequence.
ACCESSION   DASQSL010000877 DASQSL010000000
VERSION     DASQSL010000877.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1274
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144090"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..276)
                     /locus_tag="VE844_08995"
     CDS             complement(<1..276)
                     /locus_tag="VE844_08995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009205208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease V"
                     /protein_id="HZC01481.1"
                     /translation="MYQHAWEVSPKEAIAIQQQLRSKVITEDRLGPVRLVAGVDVGSV
                     EGGRRARAAVAVLAYPELALCNHVIAERPVDFPYIPGLLSFREIPAVI"
     gene            complement(454..>1274)
                     /locus_tag="VE844_09000"
     CDS             complement(454..>1274)
                     /locus_tag="VE844_09000"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HZC01482.1"
                     /translation="ERHYRNEGSLERTAQYLEERLANLGYSVRVQAYGPGQPHPFKNL
                     EVEIRGGKRPNEIVVIGAHYDTVPGSPGADDNATGIAALLELARDFSGKKPKRTIRFV
                     AFVNEEEPFATTPAMGSMVYARAARGHGDRIMAMISLESIGFYSDEPGSQNYPVPLRW
                     LYPDTGIFLAFIGNFASRGLVRDAIASFRAQTQLPSEGLAIPEALVKDIGRSDHASFW
                     RYGYSALMVTDTVPFRNPNYHSEDDKADTLDFERFTLAVLGLRRVVEDLAGEAD"
BASE COUNT          275 a          376 c          338 g          285 t
ORIGIN      
        1 gatcacggcc gggatctcac gaaaggagag aagacctggg atatacggaa aatcgaccgg
       61 ccgctcggcg atgacgtggt tgcaaagggc aagctcggga taagctaaga cggccactgc
      121 cgcgcgcgca cgcctgcccc cctcgacgga tcccacatcc acacccgcta ccaagcgcac
      181 cggtcctagc cgatcttcgg taatgacctt gctacggagt tgctgttgaa tggcaatcgc
      241 ttccttgggg ctgacttccc aagcgtgttg gtacatattt taatcgagcg tcctcggctt
      301 cagtatttca tactggcaga aggtgcggtc atgttttggc ggattacgct ccgcgaatcc
      361 acctacccgt tatccacctt acgcgcgcta atccgctaac ggtgagagtg attatccaaa
      421 tgggtgcttg taagaacaag agattatacg cgtttaatct gcttcgccag ccaggtcttc
      481 cacgacgcgc ctgagcccta gcacggctag cgtgaagcgc tcaaaatcga gcgtgtccgc
      541 tttatcgtct tcactatgat agttcgggtt tctaaaaggc acggtgtcgg tcaccatcaa
      601 ggccgaatac ccataccgcc aaaacgaggc atggtccgaa cgaccgatgt ccttaacgag
      661 agcctccggg atggcgagac cttctgacgg aagctgcgtc tgcgcccgaa agcttgcgat
      721 ggcatcgcgc actaagccgc gagaggcgaa attcccgata aatgcgagaa atatccctgt
      781 atctggatat aaccagcgca agggtaccgg gtagttctgg cttcctggct catcgctgta
      841 aaaaccgata ctctccagcg aaatcatcgc catgatcctg tcgccatgcc cccgcgccgc
      901 gcgcgcatag accatacttc ccatcgctgg agtggttgcg aagggctcct cttcgttgac
      961 aaaggccaca aagcggatcg tccgcttggg cttcttcccg ctgaaatcgc gtgcgagttc
     1021 aaggagcgcc gcgatacccg tagcattgtc atctgctcct ggagagcctg gaactgtatc
     1081 gtaatgcgct cctatcacca cgatttcatt gggtcgtttg cctccccgta tctctacctc
     1141 aaggtttttg aatggatgcg gctgtccagg gccgtaggcc tgcacacgga cgctatagcc
     1201 gagattagct aatcgttcct cgagatactg ggcggtccgc tccagactgc cttcgtttcg
     1261 gtaatgccgc tccc
//
LOCUS       DASQSL010000878         1943 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_75346, whole genome shotgun sequence.
ACCESSION   DASQSL010000878 DASQSL010000000
VERSION     DASQSL010000878.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1943
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75346"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1504
                     /locus_tag="VE844_09005"
     CDS             <1..1504
                     /locus_tag="VE844_09005"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HZC01483.1"
                     /translation="VSVSIAIPNMMTSLRADLDQIQWVVTISMLVQTLIMPTTGWLIE
                     VLGPRALFLASLILVSSGTVLCSLAWSLESLLVFRIVQGLGFGPLQPVCMAILYRTFP
                     PAQRGMAIGLVNMSPAVGVSLGRLSGGFLVDTFDWRMVFYLTLCFSVATVVLGVFLIP
                     REARQPRQVTVDIWGICAMGGFLVPLMLALTQGRLEGWDSPYIGLLFALAGVSFLAFI
                     TIELQGHAPVVDLRLYTNFNFALGSLVQFLVSVLFMSSTFLVTIFLQQVSQYTPSQVG
                     MLTFHEGWIFGVGALLAGPLADRTDPRLPLVCGLVGFAIVYFWLGGISAVTTPAILVS
                     MLCVRSFSYGWVNAPNMLMTLRTLPEDQVGMATGLFSVARSISGTLGVALSATLLEHQ
                     RAAHTIALAQQQGGLELPSQWAMTSLQQTFASLGEETSVAQVQATAYLHHLMVAEATM
                     TAYQDIFLLSGLIALGNILLGLLRTRRDGVRAPSGQEAPSRAEKRGTVSS"
     gene            1622..>1943
                     /locus_tag="VE844_09010"
     CDS             1622..>1943
                     /locus_tag="VE844_09010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01484.1"
                     /translation="MGARLKLTLAIWSRLGFHRVFQTASRKQIGNLQNLSKLEKQAHH
                     PNAKRNCLNPFLEQYIQCVIEVESAPNCRRQFGSLRRTPIIDNGAGNQERIYKTTEEY
                     LGNAQ"
BASE COUNT          339 a          545 c          600 g          459 t
ORIGIN      
        1 ggtcagcgtg agtatcgcca ttcccaacat gatgacgagc ctgcgggccg atctggatca
       61 gatccagtgg gtggtgacca tttccatgct ggtgcagacc ctcataatgc ccaccacggg
      121 ctggctcata gaggtgctgg ggcctcgtgc gctcttcctc gccagcctca tcctcgtcag
      181 tagtggcacc gtgttgtgta gccttgcctg gagtctcgaa tccctactcg tgtttcgcat
      241 cgtgcaggga ctcggttttg gccctctgca gccggtctgt atggcgattt tgtacaggac
      301 ctttccccca gcacagcgcg gtatggctat tggcctcgtc aacatgtccc ccgccgtggg
      361 ggtgtccctc ggtcgcttga gcgggggctt tctggtcgac acctttgatt ggcggatggt
      421 cttctacttg accctctgct tcagtgtggc cacggtggtg ctaggggtgt tcctcatccc
      481 gcgcgaggcc cggcaaccgc ggcaggtgac ggtcgatatc tggggcatct gcgccatggg
      541 tgggttcctg gtcccgctga tgttggcgct cacccagggg cgcctcgaag gctgggactc
      601 cccgtatatt ggcctgttgt ttgccctggc tggcgtctcg ttcctcgcct ttatcaccat
      661 cgagttgcag ggtcatgcgc cagtggtgga tctacggctc tacaccaact tcaatttcgc
      721 cctgggctcc ctggtgcagt tcttggtgtc ggtgttgttc atgagctcga cgttcctcgt
      781 caccattttc ttgcaacagg tgtcccagta cacgccctcg caggtcggca tgctgacgtt
      841 tcatgagggc tggatctttg gggtgggcgc cctgctggcg gggccgctcg ccgaccgcac
      901 cgacccgcgt ctgccgctcg tgtgtgggct ggtcggtttt gccatagtgt atttctggct
      961 tggcgggatt tccgccgtta caacccctgc gatcctcgtg agcatgctat gcgtgcgcag
     1021 tttcagttat gggtgggtga atgctccgaa tatgctcatg acgctgcgca cgctgccgga
     1081 ggaccaggtg gggatggcga cgggactgtt ttccgtagcg cgcagtattt ccgggaccct
     1141 cggggtggcg ttgtcggcca cgcttttgga acaccagcgg gccgcgcaca ccatcgcgtt
     1201 ggcccagcag cagggagggc tggagttgcc gtcccaatgg gccatgacga gcttacaaca
     1261 gacctttgcc agcctagggg aggagacgag tgtggcgcag gtacaagcga ccgcgtatct
     1321 ccaccacctg atggtggcag aggccactat gaccgcgtac caggatattt ttctgctgtc
     1381 ggggttgatc gcgctcggca atattctcct aggcctgttg cggacgcgcc gcgacggcgt
     1441 gcgagcaccc agcggtcagg aggcgcccag ccgggctgag aagcgtggca cggtgtcttc
     1501 ctagacgtgg gagcgtgccg ccttgcccct acccgctgga gagcggagtc cacaggggca
     1561 tggcaactca gcatgacaat gccaggaggc caaggatgca attcggtgtg gctcatattg
     1621 gatgggtgcc cgtctcaaac tgacgcttgc aatctggagt cgcctgggct ttcacagggt
     1681 tttccagact gcgagccgga agcagattgg aaatttgcaa aatttgtcaa aacttgaaaa
     1741 acaggcacat catcccaatg ccaagaggaa ttgcttgaat ccatttttag aacaatatat
     1801 tcaatgtgtt atagaagtcg aatctgcacc taactgccgt cgtcaattcg gcagtttgag
     1861 acggacaccc attattgata acggcgccgg gaatcaagag cggatttata aaacgacgga
     1921 agaatatttg gggaacgcgc aat
//
LOCUS       DASQSL010000879         1118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_75347, whole genome shotgun sequence.
ACCESSION   DASQSL010000879 DASQSL010000000
VERSION     DASQSL010000879.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1118
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75347"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            84..1046
                     /locus_tag="VE844_09015"
     CDS             84..1046
                     /locus_tag="VE844_09015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
                     /protein_id="HZC01485.1"
                     /translation="MASVLHGSARTTPRIRAELKAAKAPARLLASQYGINVKTVLKWR
                     NRAETTDAPMGPKPESTVLTPAQEAIIVEFRRRTLLPLDDVLGCLKDTIPNLSRSALH
                     RCLQRHGISRLPASETTEKRKRFKTYDIGYVHIDSAELTHADGKLIMFLAIDRVSKFA
                     YVAFHEHAGKMEGAAFLRNVVAAFPYQIHTVLTDNGMAFADLPKNREGPTRRFLGPHI
                     FDRVCLEHGIEHRLTKPYHPWTNGQAERMNRTVKEATVRVFHYDDLESLKAHVLSFVT
                     AYNFAKHLKALKWKTPFQSICDAWKANPSAFKINPHRLIPGPHT"
BASE COUNT          264 a          379 c          280 g          195 t
ORIGIN      
        1 gtggcctgct gatcccttag ttgtttagtc ccggagtgtg gcggtgcaaa ctcatccctg
       61 acccgtcagg aggaggatgc actgtggcaa gcgttcttca cggcagcgcc cgcacgacgc
      121 cgcgaattcg agccgaactc aaagcggcga aagcgccggc ccgcctcctc gccagccaat
      181 acgggatcaa cgtcaaaacc gtcctgaaat ggcgcaatcg cgccgaaacc accgacgcac
      241 ccatggggcc aaagcccgag agcaccgtgc tgacgccagc ccaggaggcg atcatcgtgg
      301 agttccgacg ccgaaccctc ctgccactgg atgatgtcct cggctgtctg aaggacacca
      361 ttccaaatct cagccgaagt gccctgcacc gttgtcttca acgccatggc atatcgcgcc
      421 tcccagcgag cgagaccaca gaaaagcgca agcggttcaa aacctacgac attggctatg
      481 tccacatcga cagcgccgaa ctcacccacg ccgacggcaa actcatcatg ttcctcgcca
      541 tcgaccgggt ctcgaagttc gcctatgtcg cgttccacga gcatgccggg aaaatggaag
      601 gcgccgcctt cctcaggaat gtcgtcgcag cctttcctta tcagatacac acggtcctga
      661 ccgacaacgg catggccttc gctgatctcc cgaagaaccg tgagggacca acccggcgct
      721 tcctcggacc acatatcttc gatcgtgttt gtctcgaaca tggcatcgag catcgactga
      781 ccaagcctta tcacccctgg accaacggtc aggccgaacg catgaaccga acagtcaagg
      841 aagcgactgt tcgggtgttc cactacgacg acctcgaaag cctcaaggct cacgtgctca
      901 gcttcgtcac cgcctacaac ttcgccaagc acctcaaggc actaaaatgg aaaacaccct
      961 tccagagcat ctgtgacgca tggaaagcca atccatcagc gtttaagatc aacccgcacc
     1021 gcctcatccc gggaccgcac acctagatcg tgactccgac gttgaccgcc aaagacgtcg
     1081 acgatggcgc ccaggtcggc actttgctcg acaaggtc
//
LOCUS       DASQSL010000880         1059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_59989, whole genome shotgun sequence.
ACCESSION   DASQSL010000880 DASQSL010000000
VERSION     DASQSL010000880.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59989"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..210)
                     /locus_tag="VE844_09020"
     CDS             complement(<1..210)
                     /locus_tag="VE844_09020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01486.1"
                     /translation="MSLTWLAGAGILALASCVFGLAGFGLGLVALALLPFLIPPTLAV
                     PLVSLYSAVFGLVLTLQLRRDLMAAP"
     gene            complement(342..>1059)
                     /locus_tag="VE844_09025"
     CDS             complement(342..>1059)
                     /locus_tag="VE844_09025"
                     /inference="COORDINATES: protein motif:HMM:NF013087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008171 - O-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HZC01487.1"
                     /translation="MEGRHSWYTDRYHQALQTAETIRRDAAQTKIDFLSMSAEALEAF
                     LRGFYFNTLRAGQHLATHHDFSSRRHLLDVGGGSGGVAMALATAYPQLRATVIDLPTV
                     TPITQRFIQEGDLADRVEAIAGDVVHGPLTGTYDVAVLRAFIQVLSRDDAQRALHHLS
                     QILEPGSPIYIVGQVLDDSHLSPVESVVSNMFFINIYDEGQAYTYGEHRDWLTRAGFT
                     DIDRVIQTGGTSIITAHNPS"
BASE COUNT          243 a          309 c          315 g          192 t
ORIGIN      
        1 aggcgcggcc atgaggtcac ggcgcaactg cagggtcagg accaggccga agaccgcact
       61 gtacagggag acgagcggga cggccagcgt cgggggtatg aggaagggca ggagggccaa
      121 cgccaccaac ccgaggccga accctgccag cccgaacacg cagctcgcca gtgccaggat
      181 gccggctccc gccagccacg tcaggctcac gcgacgcctt tccaccacgc ccgcggggga
      241 ccaggcgtgg gtgtgacccg cgcccccgga ccaggcctta atagtgagaa gcggtcatac
      301 gccgccactt gtgaggtttc ggccgaaccg aacacacgtc gttacgatgg gttgtgtgcc
      361 gtaatgatgc tcgtcccacc cgtctggatg acccgatcaa tatctgtaaa gcccgctctc
      421 gtcagccaat cgcggtgctc accgtaggta tacgcttggc cttcgtcata gatattgatg
      481 aagaacatat ttgaaaccac gctctccacg ggagagagat gagaatcatc gagaacctga
      541 cctacgatat agatcggact gccgggttcg agaatctggc tgagatggtg aagcgctcgc
      601 tgggcatcgt ctcgcgacaa gacctggata aacgcgcgta acacagcgac gtcatacgta
      661 cctgtgaggg gtccatgcac cacatcgccc gcgatcgcct caacccgatc ggccaagtct
      721 ccttcttgga taaaacgttg agtgatcggc gtgactgttg ggaggtcgat caccgtcgca
      781 cggagttgcg gataggcggt ggcgagagcc atcgcgacac caccagaacc tccccccaca
      841 tcaagcagat ggcgacggga ggagaaatca tgatgcgtcg cgagatgttg ccccgccctt
      901 aaggtattga aataaaagcc acgcaagaat gcttctagcg cttcggcaga catcgagaga
      961 aaatcgattt tcgtttgtgc agcatctctg cggatggtct ctgccgtttg taaggcctgg
     1021 tgatatcgat ccgtatacca ggagtgacgg ccttccata
//
LOCUS       DASQSL010000881         1583 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_195520, whole genome shotgun sequence.
ACCESSION   DASQSL010000881 DASQSL010000000
VERSION     DASQSL010000881.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1583
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195520"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            197..1567
                     /locus_tag="VE844_09030"
     CDS             197..1567
                     /locus_tag="VE844_09030"
                     /inference="COORDINATES: protein motif:HMM:NF041680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NF041680 family putative transposase"
                     /protein_id="HZC01488.1"
                     /translation="MHKPPLGGVIVDMNDTTTTTQPQLSQLATFRQAIYTCFLKAGEV
                     LFEMIDALLLSPRLGSFPALSCVPVFRRQWPSLYEGLQDGKVDQEKLVEALTEQLPET
                     ERPVLVGDHTSWARPQARTLKERSFQHQPPPIKGQKPITLGHGYSTLGMVRPAARSNQ
                     KASGSWFLPLLHERIESTTTPSKKAAEQLKQVCQKLDQRPLALYDNAYGSGIFLKETE
                     AVPCDLLFRVRPNRKLRRSALPYSGNGRPPMHGAVFRLGDPTTWGKPDEEGEFDDPKL
                     AHVRLQRWNTLHFEQAPKPIITLFRLERLEARGTRRDPQGVWLGYCGKELPRNSDAWR
                     EYLNRFVVEHWYRFIKQSLNWTRPRLSTPGQSELWSTRVIITYWQLWLARSVVAHCPR
                     PCQKAQPELTPGWVHQAMGGVLATIGTPTAVPKPRGNSPGCSQGRLRTKRTRYPVVKK
                     QTKLAP"
BASE COUNT          337 a          476 c          451 g          319 t
ORIGIN      
        1 ctaaattggt aaaactcgtg cgttgagtat cagtgacaaa ttcctcaatc ggattttctc
       61 ttctgcgcgc gtcgaggtcg aacacgttat ctccggcgtc aaacgctgtc gcatcgtcaa
      121 agatgttttg cgcctcacca agaaattcga gtttagacta tttgaacttt gatagatgaa
      181 aacggcggtt tgagccttgc acaaaccgcc gttgggtggt gtgattgtgg atatgaacga
      241 cacaaccacc actacccaac cgcagcttag ccagcttgcg actttccgcc aagccatcta
      301 cacctgcttt ctcaaggcgg gcgaggtgct ctttgaaatg attgatgcct tgttgctgtc
      361 accccggctg gggtcgtttc ctgcgctctc ttgcgtgccg gtctttcgcc gtcagtggcc
      421 aagcctctac gaaggcttgc aggatggcaa ggttgatcaa gagaagctgg ttgaggcatt
      481 gaccgagcag ttgcccgaga ctgagcgccc ggtgctggtc ggggatcaca caagctgggc
      541 acgcccgcag gcgcgcacgc tcaaagagcg ctcttttcag catcagccgc cgccaatcaa
      601 ggggcaaaag ccgatcaccc tgggccacgg ttacagcacg ctggggatgg tccggccagc
      661 cgctcggtct aaccagaagg cttccggcag ttggtttttg ccgttgttgc acgagcgcat
      721 cgaaagcact acgacacctt ccaaaaaggc tgccgagcaa ttgaagcagg tctgccagaa
      781 actcgatcaa cgaccgctgg ctctctacga taacgcgtac ggcagcggta tatttctcaa
      841 agagacagag gccgtcccct gcgatctgct cttccgcgtg cgccccaatc gcaagctgcg
      901 ccgctccgcg ctgccctaca gcggcaatgg ccggccgcca atgcacggcg cggtgttccg
      961 gctcggcgat ccgacgactt ggggcaagcc cgacgaagaa ggggagttcg atgatcccaa
     1021 actcgctcac gtgcgccttc aacgctggaa cacgttgcat ttcgagcaag cgcccaagcc
     1081 tatcatcacc ctgtttcgcc tcgaacggtt ggaagcgcga ggcacgcgcc gcgatccgca
     1141 gggggtctgg ctcggctatt gtggcaaaga gttaccgcgc aactctgacg cgtggcgcga
     1201 gtacctgaac cgtttcgtag tcgagcactg gtatcgcttc atcaagcaat cattgaactg
     1261 gacacggccg cgcctctcga cgcccgggca aagtgagctg tggagcacac gggtaatcat
     1321 cacctactgg cagttgtggc tggcgcgttc agtggtcgcc cattgtccgc gtccgtgcca
     1381 aaaagcccag ccggaattga ccccggggtg ggtgcatcag gcgatgggag gggttttggc
     1441 gacgattggt acacccaccg ccgtgcccaa acctcgagga aactccccag gctgctcgca
     1501 agggcgcctc cgcaccaaac gcacacgcta cccagtggtc aagaagcaga caaagttggc
     1561 gccatgacca ccaaacaggc ttt
//
LOCUS       DASQSL010000882         1532 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_184109, whole genome shotgun sequence.
ACCESSION   DASQSL010000882 DASQSL010000000
VERSION     DASQSL010000882.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184109"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..773
                     /locus_tag="VE844_09035"
     CDS             <1..773
                     /locus_tag="VE844_09035"
                     /inference="COORDINATES: protein motif:HMM:NF013362.4"
                     /note="catalyzes the methylation of cytosine at position
                     967 (m5C967) of 16S rRNA; SAM-dependent methyltransferase;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase"
                     /protein_id="HZC01489.1"
                     /translation="RLSRKDYLALLRETGIEARQAANTSHGIILSQPIEISRLPRFKE
                     GYLSVQDAAAQLAAPLLDVRPGQRVLDACAAPGGKAAHILEACPELKILIAIEREPNR
                     IALLNTTLKRLQLEARVLQADATRPEDWWDGRPFERILVDAPCSGSGVIRRHPDIKYL
                     KHETDLPALVNRQARLLTALWPLLAEHGKLIYVTCSILTAENQDQIAAFLNQHPDAHV
                     LTLNDPWGRPAGAGRQILPGEAGMDGFFYAALVKALSV"
     gene            742..1326
                     /locus_tag="VE844_09040"
     CDS             742..1326
                     /locus_tag="VE844_09040"
                     /inference="COORDINATES: protein motif:HMM:NF025692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4390 domain-containing protein"
                     /protein_id="HZC01490.1"
                     /translation="MPLWSKHCPFNTQRHLGWLLMTWLLIPTAILAAGITIQRATARL
                     VNDVYMVDATIHYQFSQRAIEALANGIALTLIVEIEVRQRRAYLWDSKVATISQRFRL
                     KHHALSKQYVVTNLITDMRRNFPSLDEAIAILGKIEGVPIIEQRLLNPDRSYQARIRA
                     RLDIEALPALLRPIAYFSSDWYLSSPWYTWEIKP"
     gene            1323..>1532
                     /locus_tag="VE844_09045"
     CDS             1323..>1532
                     /locus_tag="VE844_09045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01491.1"
                     /translation="MNRRLTVLLAVATLSLLMLVSLVMMSSAMQNSERFGRFYSSLLI
                     VNALGLTTFMVLIGLNIRRLVRALRA"
BASE COUNT          321 a          441 c          409 g          361 t
ORIGIN      
        1 gccgattgag ccgtaaggat tatcttgccc tgctgagaga gactggtatt gaggcgaggc
       61 aagccgccaa cacctcacat gggatcatcc tgtctcaacc tatcgagatc tcgaggctac
      121 cgagattcaa agagggttac ctctcagttc aggatgcggc tgcccaattg gctgcaccct
      181 tattagatgt ccggcccgga cagcgggtat tggatgcgtg cgcagccccg gggggtaagg
      241 cggctcacat tctggaagcc tgcccagagc ttaagatcct tatagccatt gagagagaac
      301 caaaccgtat cgcactcttg aacaccaccc tcaagcgatt gcagcttgag gccagggtct
      361 tacaagcgga tgctactcgg cccgaagact ggtgggacgg ccgcccgttt gaacggatcc
      421 tggtggatgc cccgtgttcc gggagcggtg tgatccggcg gcatcccgat ataaagtatt
      481 taaaacacga aaccgatcta cctgcgctgg tcaataggca ggcgcgtttg ctcactgcac
      541 tctggccctt gctggccgag cacggtaagc tcatctatgt gacctgttct attttgaccg
      601 ccgaaaatca ggatcagatc gccgcttttc taaatcagca ccccgatgcc catgtactca
      661 ccctcaacga tccatggggc cgccctgcgg gggcgggacg gcaaatactg cccggtgagg
      721 ccgggatgga tggcttcttt tatgccgctt tggtcaaagc actgtccgtt taatacccag
      781 cgtcatctcg gctggctatt gatgacctgg ttgctgatcc ccaccgcgat cttggcggcc
      841 ggcatcacca ttcaacgggc cacagcgcgc ctggtcaatg atgtctatat ggtggatgcc
      901 acgatccatt accaatttag ccaaagagcg atcgaggcgc tggccaatgg tattgccttg
      961 acacttatcg tcgagatcga ggtcagacag cggcgtgcct acctttggga ctccaaagtg
     1021 gctacaatca gccaacgctt ccgtcttaag catcatgctt tgagcaaaca atatgtggtg
     1081 actaacctga ttactgatat gcgccgaaat ttcccctcgc tcgatgaggc tatcgctatc
     1141 ttgggaaaga tcgaaggggt tccgatcatc gagcagcgcc tgctcaaccc tgatcgatcc
     1201 tatcaggccc ggatccgggc gcgtcttgac atcgaggccc tgccagcact gttacggcct
     1261 atcgcctatt tttcctcgga ctggtatctt tcaagccctt ggtacacgtg ggagatcaag
     1321 ccatgaaccg acgtctgacc gtattattgg ccgttgctac cttgagcctc ctgatgctcg
     1381 tgtctctggt catgatgagc agcgccatgc agaactccga gcgttttggc cgcttctatt
     1441 cgagcctgct catagtcaat gccctggggc taaccacctt catggtgctc attggtctca
     1501 atatccgtag gctcgtccgc gccttgcgag ca
//
LOCUS       DASQSL010000883         1314 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_21289, whole genome shotgun sequence.
ACCESSION   DASQSL010000883 DASQSL010000000
VERSION     DASQSL010000883.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1314
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21289"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            319..762
                     /locus_tag="VE844_09050"
     CDS             319..762
                     /locus_tag="VE844_09050"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZC01492.1"
                     /translation="MRDEVILLAEDNADMAELFVLVLSRSGFTNEVVITRDGVETLDY
                     LFGRGEHAARDTNDKPGLVVLDLNMPRMGGLETLRRLRSDEETKLMPIVVMSASASPR
                     DKDEAYRLGANSFIGKMTSTVPYPELVPLIARYWLYANETPFSSA"
     gene            823..919
                     /locus_tag="VE844_09055"
     tRNA            823..919
                     /locus_tag="VE844_09055"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:857..859,aa:Glu,seq:ttc)
     gene            1048..>1314
                     /locus_tag="VE844_09060"
     CDS             1048..>1314
                     /locus_tag="VE844_09060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01493.1"
                     /translation="MDERQGSTETQDIYGTRIRLTREGLTYGEEFVPFAEMSRNQPEP
                     HVFWNPSTRLFEVAVLRRNGSDLIIKNLPSHTANQLREAIIDALR"
BASE COUNT          312 a          329 c          398 g          275 t
ORIGIN      
        1 ggctagacac tctacaagca cggcgagcgg tcggacgaac tcggccgtcg agcaaagatt
       61 tagtgaaagg gccggggcac agcaaccccg gccctttctc aagtcctaag agcttccgaa
      121 ccctgaaatt gctaggccca cacctctgac cgaggggcgg actcacttag ggtgagtatg
      181 acggatagag gtaacccgcc cctagcgcta ggggtagacg taagaagggt ttaacctcct
      241 cggtgccgcg ggtaacgcgg atatcggtat cagataggaa agcaaacttc tcctagctga
      301 cggggtgagg ggactaacgt gagagatgaa gttatccttc tggcagaaga caacgctgac
      361 atggcagagc tgttcgttct ggtgctcagt aggagtggct ttaccaacga agtagtcatt
      421 acccgcgacg gggtggagac gctagattac ctgttcggcc gaggtgagca cgctgcgcga
      481 gacaccaatg ataaaccggg tttggttgtg ttggatctga acatgcctcg catgggcggg
      541 ctggaaacgc tacggcgtct gcgttcagac gaggagacca agctgatgcc gatagtggtg
      601 atgtctgcta gcgcttctcc gagggataag gacgaagcgt atcgcttggg agccaatagc
      661 tttatcggca aaatgacgtc gacggtgccc taccccgaac tggtgccact gatagcgcgg
      721 tattggttat atgcgaatga gaccccgttc tcctcggctt gacttttctg ggaagcatct
      781 gtggtttcgt atctacgaga gggggtatga ggggcatctt gtggagaggt ggcagagcgg
      841 tttaatgcag cggactttca agaaccagtc cgtttcgcca gtaatcctgg cgtcggaggt
      901 tcgaatcctc ccctcgccgt accggcggtg aaggagaagc ctctccagga tagtagtgtt
      961 tactccccct acggcaaggg gcggtaggta caatcgtact cattgatggg aggccacacg
     1021 gcgtcacttg gcgacgaaag tagttagttg gatgaaaggc aaggttctac ggaaacccaa
     1081 gacatctatg gtacgcgtat acgactaacc cgagagggcc tcacctacgg tgaggagttc
     1141 gtgcctttcg ctgagatgag cagaaatcaa ccagagcccc acgtcttctg gaaccccagc
     1201 actaggctgt tcgaggtcgc agtgttgagg cgcaacggct cggatctgat cataaagaat
     1261 ctaccctcac acaccgccaa ccaacttagg gaagcgataa ttgacgctct acgc
//
LOCUS       DASQSL010000884         1184 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_195537, whole genome shotgun sequence.
ACCESSION   DASQSL010000884 DASQSL010000000
VERSION     DASQSL010000884.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1184
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195537"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..778)
                     /locus_tag="VE844_09065"
     CDS             complement(<1..778)
                     /locus_tag="VE844_09065"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HZC01494.1"
                     /translation="MKQDRQQLVKPHLLGMALLTAIGCSEGQSGGQPQTEKPAAPSLS
                     EPEEAVSSATLPVFRYRLAADGLPVEGRWKSTPVFADVNRDGFLDLAAHPRLAEGARV
                     WLGNGKGTWTDASQGLAMDTSCGGGIRFGDINKDGRLDVAVADHCQGVSVYLGDGQGH
                     WRVTTEKLNSELARKMASEDPEGNTFSGAEDLAVGDVNEDGFLDIVASGSDQGGFTVY
                     LGNGAGKNWKEAKADGLPSGEDPEAGDEEAGGWANKLLLHD"
     gene            complement(775..>1184)
                     /locus_tag="VE844_09070"
     CDS             complement(775..>1184)
                     /locus_tag="VE844_09070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01495.1"
                     /translation="KLPPHLRPADEEAALSKRAHEYWQAKETQDWQLIYQYLTPDHRA
                     QVSLEQFLKKKALFSYSSHRLEWTEVSDNRGRVKVVYRRKLNDPSVSKLDPQEDRVIE
                     NWIKIDGQWYRDLEAKPKKANDPPGNNQAGERP"
BASE COUNT          252 a          383 c          264 g          285 t
ORIGIN      
        1 tatcatgcaa aagcagcttg ttggcccatc cgccggcctc ttcatcaccg gcttccggat
       61 cctcaccgct cgggagccca tccgccttgg cttccttcca gttcttgccg gcgccattcc
      121 caagatacac tgtaaatcct ccctgatcag aaccgctggc cacaatatct aaaaagccat
      181 cttcattgac atcgccgacc gccaggtctt cagcaccgga gaaggtatta ccctccggat
      241 cttcacttgc catcttgcgc gccaactccg agttcaactt ctctgtagtt actcgccaat
      301 gaccctggcc atcccccaaa taaacagaca caccctggca atgatccgcc accgccacat
      361 caaggcggcc atccttattg atatccccaa accgaatgcc acctccacag gaagtatcca
      421 tcgccaggcc ttgggaagca tccgtccagg ttcctttacc gttgcctaac catacccgcg
      481 ccccttctgc cagccgggga tgggccgcca gatccagaaa accgtcccga ttgacatcgg
      541 caaagactgg cgtgctcttc caccgccctt cgacaggaag tccatctgca gccaatcggt
      601 aacgaaacac cgggagggta gccgaagaga ctgcctcctc gggctcagac aaagagggtg
      661 cggccggttt ttcagtttgc ggttgtcccc cgctttgccc ctcgctgcat cctattgcgg
      721 tcaataaagc catccccaaa aggtggggtt taacgagctg ctgtctatct tgcttcacgg
      781 cctctctccc gcttggttat tccccggtgg atcattcgcc tttttaggtt tagcctccaa
      841 gtcccgatac cactgaccat ctatcttaat ccaattctcg atcactctgt cttcctgcgg
      901 atccaattta gagacgctcg gatcatttaa tttacgccta tacaccactt ttacccggcc
      961 tcgattatcg gagacctcgg tccattccag gcggtgtgaa gagtaagaaa acaaggcctt
     1021 tttctttaaa aactgttcaa gagaaacctg tgcccggtga tccggggtca gatactggta
     1081 aatcagctgc cagtcttgtg tctctttggc ctgccaatat tcgtgcgccc gcttggagag
     1141 cgccgcctct tcgtcggcag ggcgcagatg cgggggtaat ttag
//
LOCUS       DASQSL010000885         1138 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_87357, whole genome shotgun sequence.
ACCESSION   DASQSL010000885 DASQSL010000000
VERSION     DASQSL010000885.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1138
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87357"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1138
                     /locus_tag="VE844_09075"
     CDS             <1..>1138
                     /locus_tag="VE844_09075"
                     /inference="COORDINATES: protein motif:HMM:NF025082.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HZC01496.1"
                     /translation="VVFLDNGSTDGTVSVAQSYENVTILQTELSAKGHLGFMKQYLVT
                     RFGRGRWVLRVDIDELFDYPYSDVVSLSSFLRYLTEKSYTAVVAQMLDMFPDKPLSGR
                     ASEQDEPLKELHRFYDISDIRRQSYYSRDKSARNTVASEEIEIYRDGIRKTIFENGAL
                     LTKHPLMFIDEDRRPVARANWVGGAHVADITCVLFHYMFAGDFYDRAVRVVKEETLSK
                     ASRNYKMFLKTLEQNPELRIKRETAQELESVNDLVDNQFLVISADYMAWVYSEERKSA
                     SDNAVQGDGAPRWLIEAFSKISARARTQARVARVLEYQVERLKRNLAMERQTEERLQA
                     KNSQLREKHRKAKNDLVAKNRQSIEQLKNLKERNRDLERQIRDIQ"
BASE COUNT          292 a          298 c          333 g          215 t
ORIGIN      
        1 cgtagtcttt ctggacaatg gctccaccga cggtacggtc tccgtcgccc aaagctacga
       61 gaacgtaacc atactgcaga cagagctttc cgctaagggg cacctgggct ttatgaagca
      121 gtatttggtc acccgcttcg gcaggggtag atgggttctc cgcgtggaca tagacgagct
      181 gttcgactac ccgtactccg atgtggtgag tctgagttct tttctgaggt atctcaccga
      241 gaagtcctac actgcggtcg tggcgcagat gctggacatg ttcccggata aacctctttc
      301 aggccgggcg agcgagcagg acgagccctt aaaggagctg cacaggttct atgacatctc
      361 ggacattagg aggcagagtt attactctcg cgataagtcc gccagaaaca cggtggcgag
      421 cgaggagatc gaaatctaca gggacgggat cagaaagact atctttgaga acggcgcgct
      481 gttaacgaag catcccttga tgtttatcga cgaagataga agacctgtgg ccagagcaaa
      541 ctgggttggc ggagcccacg ttgccgacat tacgtgcgtg ctctttcact acatgtttgc
      601 cggcgacttc tacgatagag cggtgcgagt tgttaaagag gaaaccctct ctaaagcctc
      661 ccgcaactac aagatgtttc tcaaaacgct ggagcaaaac cccgagctgc ggatcaagcg
      721 ggagaccgcc caggagttag aaagcgtcaa cgatctggtc gacaaccagt tcctggtcat
      781 ctccgcggac tatatggcct gggtctactc ggaggaaagg aagagcgcat ccgataacgc
      841 cgtccaaggg gacggcgcgc cgcgttggct gatcgaggct ttctccaaga tcagtgcgag
      901 ggcgagaacc caagccagag tagccagggt tctcgagtac caagtcgaga ggctgaagcg
      961 taacctggcc atggagcgcc agaccgagga gcgccttcaa gccaagaaca gccagctgcg
     1021 cgagaagcat cggaaagcca agaacgacct ggtggccaaa aaccgccaga gtatcgagca
     1081 gctgaagaac ctcaaagaga ggaaccgcga tcttgagcgc cagatacggg acatacaa
//
LOCUS       DASQSL010000886         1692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_144133, whole genome shotgun sequence.
ACCESSION   DASQSL010000886 DASQSL010000000
VERSION     DASQSL010000886.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1692
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144133"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(82..156)
                     /locus_tag="VE844_09080"
     tRNA            complement(82..156)
                     /locus_tag="VE844_09080"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(122..124),aa:Met,seq:cat)
     gene            complement(230..>1692)
                     /locus_tag="VE844_09085"
     rRNA            complement(230..>1692)
                     /locus_tag="VE844_09085"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          311 a          571 c          448 g          362 t
ORIGIN      
        1 ctggtccact agacgatggg ggcgcggatc gacaaaaaga gaacacaggg ccaattatac
       61 caggccctgg gttctgccta ttggtagcgg gggccggatt cgaaccggcg acctccgggt
      121 tatgagcccg acgagctgcc actgctctac cccgcgacat agaccaaaga gcaaaagcga
      181 agagacaggt tgacttcatt gcacgcctca ggcacggcag gcccgagcac gggtcaagcc
      241 ctcgaccatt agtaccgctc agctgcacgc attgctgcgc ttccacctgc ggcctatcca
      301 gctcgtagtc ttcgagcggt cttacccggt tatcccggtg ggaaacctca tcttgaggcc
      361 ggcttcgcgc ttagatgctt tcagcgctta tccgttccga tcctggctac tcggcactgc
      421 ccctggcgga acaaccgaca caccagcgga tcgtcctccc cggtcctctc gtactagggg
      481 aagctcctct caagtttcct gcgcccacga cggatagaga ccgaactgtc tcacgacgtt
      541 ctgaacccag ctcgcgtacc gctttaatgg gcgaacagcc caacccttgg gacatactcc
      601 tgccccagga tgcgacgagc cgacatcgag gtgccaaacc ttcccgtcga tgtgaactct
      661 tggggaagat aagcctgtta tccccggggt agcttgtatc cgttaagcca cagcccttcc
      721 acacggaact gtaggatcac tttgcccgac tttcgtccct gctcggcgcg ttggcctcgc
      781 agtcaagcca ccttctgcca atgcactcac gcgggcgatt tccatccgcc ctgaggtgac
      841 ctttgggcgc ctccgttact ttttgggagg cgaccgcccc agtcaaactg cccaccagac
      901 gcggtccggc tgcttgctca gccgttagat agcaaaccga gaaagagtgg tatttcaccg
      961 ttgcctccac cctcgccgga acgagggctt cacaggctcc cacctatcct acgcatcctc
     1021 ggctcgctac cagcgtcaag ttgcagtaaa gctccacggg gtctttttgt cctgtcgcgg
     1081 gtaacccgca tcttcacggg tacttcaatt tcgccgagtc cttcgtcgag acagcgccca
     1141 gatcgttacg ccattcgtgc gggtcggaac ttacccgaca aggaatttcg ctaccttagg
     1201 accgttatag ttacggccgc cgttcaccgg ggcttcggtt caagccgtga agctctcccc
     1261 ttaaccttcc ggcactgggc aggcgtcagc ccccatacgt ccccttacgg gtttgcggag
     1321 acctgtgttt ttgttaaaca gtcgcctggg cctgctcact gcggccctca gccgctcccc
     1381 gggcgagccg gttcacggtc gagggcaccc cttctcccga agttacgggg tgagattgcc
     1441 gagttccttg acgaaggttc tctcgcccac cttggtgcac ttgcacccac ccaccagtgt
     1501 cggtttgcgg tacggatacc acacgtcctc caccacaggc ttttcttgcc agtccaggcc
     1561 cgccccaacg gcaggctgca gtaaagctcc acggggtctt tttgtcctgt cgcgggttgg
     1621 ccgcgtcttc acggccagct cagtttcgcc gggcccctcg tcgagacagc gcccagatcg
     1681 tgacaccatt cg
//
LOCUS       DASQSL010000887         1878 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_144142, whole genome shotgun sequence.
ACCESSION   DASQSL010000887 DASQSL010000000
VERSION     DASQSL010000887.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1878
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144142"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..435)
                     /locus_tag="VE844_09090"
     CDS             complement(<1..435)
                     /locus_tag="VE844_09090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1269 domain-containing protein"
                     /protein_id="HZC01497.1"
                     /translation="MNRRLYFVLPDVDTAQQVERDLLLAKIEDRRMHFLGKRGTDLKD
                     LPEASLGQKTDLFHGMRVGLVAGGITGALGGFILYQFPSLIGVSLDVGIVAILALVGA
                     IFGAWVSSMIGSSTPNVRLREYEKTMEEGHILLMVDVPKECVD"
     gene            complement(428..793)
                     /locus_tag="VE844_09095"
     CDS             complement(428..793)
                     /locus_tag="VE844_09095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020409146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C oxidase subunit IV family protein"
                     /protein_id="HZC01498.1"
                     /translation="MEHAQQQHPISIYLTVWGLLFVLSTMSYLVDYFEVQDLLKHFLV
                     TAFALLKAGLIVAVFMHMRWERLALVYAILVPPFCLLVLVSILAVDGEYTFLTRGLFF
                     GQGSEVPVEHPLVEETRRE"
     gene            complement(803..1501)
                     /locus_tag="VE844_09100"
     CDS             complement(803..1501)
                     /locus_tag="VE844_09100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007922563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-copper oxidase subunit III family protein"
                     /protein_id="HZC01499.1"
                     /translation="MHRAQRGQINTAGSLTLLSGWRDIVADWSSDKQSFKVNWGKAMM
                     WIFLLSDTFIFGSFLTGYMTVRLSTTVPWPDTSKVFALVIGGTEIPLILIAIMTFILI
                     SSSGTMAMAVSFAYRRDRIKTTVLMLITAAFGATFVGMQAFEWTKLIMEGVRPWGNPL
                     GAAQFGSSFFMITGFHGLHVTVGVIYLTTVALRVLQGRYERSGNYQIVEIAGLYWHFV
                     DLVWVFIFPFFYLW"
     gene            complement(1511..>1878)
                     /locus_tag="VE844_09105"
     CDS             complement(1511..>1878)
                     /locus_tag="VE844_09105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HZC01500.1"
                     /translation="VSSVTMQWAQVAAHRGRLDDVRVALLAGGVLAWAFLAGQLWAWQ
                     QLGALGYFVATNPANSFFYLITALHGLHLLGGLVAWAKTTIKVWRGFDVGLSVQLCAV
                     YWHFLLVVWLVLLGLMLST"
BASE COUNT          481 a          570 c          484 g          343 t
ORIGIN      
        1 gtcaacacac tctttcggta cgtccaccat caataggata tgaccttctt ccatggtctt
       61 ttcgtactcc ctaagccgca cgttaggggt actcgaccca atcatgctcg atacccaggc
      121 accaaatatc gcgcctacta gagctaggat agccacgatc ccaacatcga gggatacgcc
      181 tatcagactt ggaaactggt aaaggataaa tccacccaag gcaccggtta tgcctccagc
      241 caccagaccc acccgcatac cgtgaaagag gtcggttttt tgcccgagcg acgcctcggg
      301 tagatccttg aggtccgtcc ctcgtttacc caaaaaatgc atgcgccggt cctcgatctt
      361 tgcaagtaga aggtctctct cgacttgctg cgctgtgtcg acatccggaa ggacaaaata
      421 gagccttcta ttcacggcga gtctcttcga ctaaaggatg ttccaccggg acctcggatc
      481 cctgcccgaa gaacaggccc cgggtcaaga acgtgtactc cccatcgacc gccaagatgc
      541 tcaccaacac aagcaaacaa aacggcggga ccaaaatggc atacaccagg gccagccgct
      601 cccagcgcat atgcatgaag acggcgacga tgagccccgc cttcaacaag gcgaacgcgg
      661 tcaccagaaa atgtttgagg aggtcctgaa cctcgaagta gtcgacgaga taagacatcg
      721 tgctgaggac aaacagcaat ccccaaaccg tgagatatat gctgatcgga tgttgctgtt
      781 gtgcgtgttc catggtttcc ccttaccaga gatagaagaa tggaaagatg aagacccaca
      841 ccagatcgac gaaatgccaa tataggccgg cgatttccac gatctggtag ttcccgctgc
      901 gctcgtagcg tccctgcaaa acccgaaggg ccacagtagt caggtagatc acaccgaccg
      961 tcacgtgcag gccgtgaaag cccgtgatca tgaaaaagga tgagccaaac tgggccgcac
     1021 ccaaggggtt gccccaggga cggacccctt ccatgatcag cttggtccac tcaaaggcct
     1081 gcatcccgac gaaggtcgcg ccgaacgccg cggttatcag catcaaaacc gtggttttga
     1141 tgcgatcgcg gcggtaggca aagctgacgg ccatggccat cgtcccgctg ctgctgatca
     1201 agatgaaggt catgatggcg atcaggataa gggggatctc cgtgcccccg atcaccaaag
     1261 cgaagacctt actggtgtcg ggccagggga ccgtggtgga caagcgtacc gtcatatacc
     1321 cggtcaaaaa cgagccgaag atgaaggtat cgctgagcag gaagatccac atcatcgcct
     1381 tgccccagtt gaccttgaac gactgcttgt ccgaggacca gtcggcgacg atgtctcgcc
     1441 accctgaaag cagagtaagg gatcctgctg tatttatctg cccacgttgt gctctgtgca
     1501 tgtatgctcc ttaggtagac aacatcagac ccaacaaaac cagccatacc accagcagaa
     1561 agtgccagta aacggcgcac agctgcacgc tcaagcccac atcaaagccg cgccagacct
     1621 tgatggtggt cttcgcccag gccaccaggc cgcccaacag gtgcagcccg tgcaacgcgg
     1681 tgatcaggta aaagaagctg ttggctggat tcgtcgccac aaaataacct aaggcgccca
     1741 gttgttgcca cgcccaaagc tgtccggcca ggaacgccca ggcaagcaca cccccggcaa
     1801 gcagggcgac tctgacgtcg tctagtctac cccgatgcgc ggcaacctgc gcccactgca
     1861 tcgtgacact gctcacga
//
LOCUS       DASQSL010000888         1887 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_144144, whole genome shotgun sequence.
ACCESSION   DASQSL010000888 DASQSL010000000
VERSION     DASQSL010000888.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1887
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144144"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            185..787
                     /locus_tag="VE844_09110"
     CDS             185..787
                     /locus_tag="VE844_09110"
                     /inference="COORDINATES: protein motif:HMM:NF021098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YsnF/AvaK domain-containing protein"
                     /protein_id="HZC01501.1"
                     /translation="MQTSGSMMVHGKDGWRGTGVPASPSQPDALQILIQLDNGQQLLV
                     SAETLVQQQDGSYYLPLTLEELEQYRRGPRSEAGKTTVVPVIEEELDVQKRVVETGKV
                     RVTKVMHERETLVDELLFRDEIEVERVPIDRVVDGPVPVRYEDDIMIVPIMEEVLVVE
                     KRLVLKEELHIHKRRVETHQPQQVTLYREEVRVERLESTE"
     gene            905..>1887
                     /locus_tag="VE844_09115"
     CDS             905..>1887
                     /locus_tag="VE844_09115"
                     /inference="COORDINATES: protein motif:HMM:NF021098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2382 domain-containing protein"
                     /protein_id="HZC01502.1"
                     /translation="MAKTLVGLYDTFTESQQVVQELVENGFSRSDIKLATHSAEDVQD
                     YDADYTYAETGSSTGRGRELMSLLTRSGVPQNEADSYAEGVRRGGTLILVKARDEQSD
                     RGLEIMNRVHSVDIDTRMSQWRQEGWSRFDPEAEPYAATDVSRERERYGRRMADEGEI
                     TIPVVEEELTVGKREVERGHVRVHTYIEEVPVEEEVRLRQESVTVERHPVDRPATEAD
                     LEASADETMEFTETAEEPVVSRRARVVEEVTVHQDVEEHTETVGDTVRRTHVDVDQEG
                     TRSATRVPGIETYEADFRQHHTSTFASSGGAYADYEPAYRYGYTLGTEERYR"
BASE COUNT          461 a          456 c          591 g          379 t
ORIGIN      
        1 atatggcgca gaggcaacct aaaaaagtcg gagcgtatgg acgaccaatc cgcacctctc
       61 gcatctttac tgtcgttatt gcccttgtta tcctccttat cctcatcgta cttgcttttg
      121 tcttgttctg atcataggag ctgtaagagg agtagcagag ctcttcgtcg tgtgaggagt
      181 aaaaatgcaa acatcgggct cgatgatggt gcacggcaag gatggttggc gtgggactgg
      241 tgttccagcc tctccctccc agcctgacgc cctgcagata ttgattcagc ttgacaatgg
      301 tcagcagctt ctggtgtcag ctgaaacact ggtccagcaa caggatggaa gctattatct
      361 gcctctaacg ctagaggagc ttgaacagta tcgccgggga ccccgctctg aggctggcaa
      421 gacgactgtc gtacccgtca tcgaggaaga actcgacgtg cagaagcgcg ttgtggaaac
      481 gggtaaggta cgcgtgacca aagtgatgca tgagcgtgaa actctggtag acgagctgct
      541 ctttcgcgac gaaattgagg tcgaacgcgt gcctatcgac cgggttgtag acggtccggt
      601 cccggtccgg tacgaggatg acataatgat cgttcccatc atggaagagg tactggtggt
      661 cgaaaaacgg ctggttctca aggaggagtt acatatccac aagcgccgcg tcgagacgca
      721 ccagccgcag caggtcacgc tttatcgtga ggaggtgcgt gttgagcgtc tcgaatcaac
      781 tgagtaagaa gagtaggtga gatcgctatg acatgatcct tgtgctacgg agcgagaagt
      841 catgtatcac tatggatcat gataaacatg gctacaattt atgtaaagaa taaggacgaa
      901 taaaatggca aaaacacttg taggcttata cgacaccttc acagagagtc agcaggtggt
      961 gcaagagctg gtcgagaacg ggttttcgcg cagtgatatc aaactcgcca cgcatagcgc
     1021 tgaagatgtt caagactacg atgcggatta cacctatgct gagacggggt catctacggg
     1081 taggggaaga gaattaatga gcctcctaac ccgatcaggt gtgccccaaa acgaagcgga
     1141 ttcctatgcc gagggggtac gccggggcgg tacgctcatc ctggttaagg ctcgggatga
     1201 gcaatcggac cggggcctgg agatcatgaa ccgcgtccac tcggttgata tcgatacacg
     1261 catgtcgcag tggcgacagg aaggctggag ccgctttgat cccgaggctg agccgtatgc
     1321 cgcaacggac gtgagccggg agcgtgagcg ctatggaagg cgcatggcag acgaaggaga
     1381 gatcaccatc cctgtggtgg aagaagaact cacggtgggc aagcgcgagg ttgagcgcgg
     1441 ccatgtgcgc gtccacacct atatcgaaga ggtgcctgtc gaggaggaag tccggttacg
     1501 gcaggagagc gtcacggtcg agcgtcaccc tgtggatcgc ccggccacgg aagccgattt
     1561 ggaagcttcc gcggacgaga ccatggaatt caccgagaca gcggaggagc ccgtggtgag
     1621 ccggcgtgcc cgggtggtag aggaggtgac ggttcatcag gacgtggaag aacatactga
     1681 gacggtggga gatacggtac gtcgcacgca tgtggacgtc gatcaggagg gtacccgatc
     1741 ggcaacaagg gtgccgggca tcgagaccta tgaggcggac ttccgacagc accacacctc
     1801 gacctttgct agcagcggtg gagcctatgc tgactatgag ccagcgtacc gttatggcta
     1861 tacgctaggt accgaagagc gctaccg
//
LOCUS       DASQSL010000889         1085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_167985, whole genome shotgun sequence.
ACCESSION   DASQSL010000889 DASQSL010000000
VERSION     DASQSL010000889.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167985"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(256..600)
                     /locus_tag="VE844_09120"
     CDS             complement(256..600)
                     /locus_tag="VE844_09120"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HZC01503.1"
                     /translation="MIDWIKKAAGEAKFITSHCQGAFLLGKAGLLDNRDATTFPTNTG
                     DLQKQYPSCRVQGDRRVVIDGNLITSPGGLASYEASLYVVEQLFGKEQAMTIASALVF
                     GPSNIEASISPK"
     gene            complement(718..>1085)
                     /locus_tag="VE844_09125"
     CDS             complement(718..>1085)
                     /locus_tag="VE844_09125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020381805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01504.1"
                     /translation="IRVYTGDDGRSHLEEVPLALRPFVDTEGAYGEGTPLQNATGITF
                     RLSPPGYILNWHCAPRRQYTITLSGEAEIEVGDGTVKRIGPGDVILAEDLTGQGHITR
                     GVGDQPRLSVVVPLADEQP"
BASE COUNT          218 a          331 c          306 g          230 t
ORIGIN      
        1 ctcctttacc tcaatcatgc acacggaccg tgtgtgcgtc gatgtccttc acgcggttgc
       61 gcctcttcaa gctgttttag tatgcgctct agaaaagatg tgacgactga tggacgcggg
      121 ctctcttgaa gtcgatgatg gactcatctc cccgatgtct ttcacgcttc acggagagga
      181 gacctgaggc tgtcgccacc acaatattgt ggcaaagcta gcctgcgcgg tgcacggata
      241 tattctccgg caagatcatt tgggactaat cgacgcctca atattgctcg ggccaaagac
      301 cagcgccgaa gcgatggtca tcgcctgctc cttcccgaac agctgctcga cgacatacag
      361 cgaggcctca tagctcgcga gccctcccgg agacgtgatc aggtttccgt cgatcacgac
      421 ccgccgatca ccctggaccc gacagctcgg atactgtttc tgcaaatcgc cggtgttggt
      481 ggggaaggtg gtcgcatccc tattgtcgag caagccggcc ttgccgagca aaaatgcgcc
      541 ttggcagtgt gaagtgataa atttggcttc accggcggcc tttttgatcc aatcgatcac
      601 gggcacaggc tacaaacacc aacagacatc gtttcactgg atcccccttg gccgcgagct
      661 ctgctgcacc ttcacagtgg ataggggtag attccatacg tgtgcgcggg acccgctcta
      721 gggctgttca tcagccaagg gcacgaccac agacagccgc ggctggtctc ccacccctcg
      781 cgtgatgtgg ccctgaccgg tcaggtcttc cgcgaggatc acatcccctg ggccgatgcg
      841 cttgacggtc ccgtccccga cctcgatctc cgcctccccg gacaaagtga tggtgtactg
      901 tcgccgggga gcacagtgcc aattcaggat atagcccgga ggggacagac gaaaggttat
      961 gccggtagcg ttttgtaggg gagtcccctc gccgtaggcg ccctcggtgt ccacgaaggg
     1021 ccgcagggct aacggaacct cctcaaggtg tgagcgtcca tcgtcgccgg tatacactcg
     1081 gataa
//
LOCUS       DASQSL010000890         2429 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_21345, whole genome shotgun sequence.
ACCESSION   DASQSL010000890 DASQSL010000000
VERSION     DASQSL010000890.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2429)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2429
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21345"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..315
                     /locus_tag="VE844_09130"
     CDS             <1..315
                     /locus_tag="VE844_09130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01505.1"
                     /translation="ARVLGRVHPEQTARMRLDGFPWAQYGSIVVKVDRVAREIRNGRV
                     RVEFLPNSPDDSSLLLQHGLPGSVEVEIEQTTPAVLALRAAGQNLTRPAQQSEQVARS
                     NP"
     gene            312..>2429
                     /locus_tag="VE844_09135"
     CDS             312..>2429
                     /locus_tag="VE844_09135"
                     /inference="COORDINATES: protein motif:HMM:NF015377.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine peptidase family C39 domain-containing
                     protein"
                     /protein_id="HZC01506.1"
                     /translation="MSVFPVGKRQRRWWVPEVVQTSAMDCGPAALKCLLEGFHIPASY
                     GRLREACQTSVDGTSIDVIETVARQLGLDAEQVMLPGDYLWLPEAEALPAIVVVRQSN
                     GFTHFVVVWRRHGRWLQVMDPGVGRRWTTCDSFLREIFLHSVRVPAAAWYDWATSSDT
                     LEIFASRLRLLGASTSAAYKLVNRAKDQATWHAMAALDAASRMLGSLTAAGGLRRGAS
                     TIRLLESLLARTAQETPGACVAVPATYWSVVPALAESEGEADHLMLRGAVLLRVRGRL
                     SPANGSENEDALAPELAAALSERPVRPMRELWALVRADGILTPLALMGALGLAVGALV
                     VEALLFRGFFDLARDLNVVGQRVVAFSALLSFVTLLWAFELPIISESLRLGRHLETRL
                     RLLLLQKLPKLNDRYLQSRPVSDMAERGHSIYLLRYLPDLAIRSVQSGWELMFTLVGI
                     GCIAPQSLPVALGIAALTVGLPIVAQPAVSERDLRVRSHAGALQGFYLDALLGIAPIR
                     THSAERSVRREHEGLLVEWARSAKSLIRLSLLVKGAQSTVCLSLAGWLLLTHIQTVGV
                     TGNLLLLVYWVLKLPSLGEGLAALALQYPTQHNIALRLLEPIKAPEEAILISKPDVEQ
                     PLGEREPAAPQQEPRLVKKTSGLALDIQGVNVVAAGHTLLRDIRLSIAPGEHIAIVGP
                     SGAGKSSLLGLLLGWHQAAGGSIF"
BASE COUNT          426 a          691 c          761 g          551 t
ORIGIN      
        1 gcccgggtcc ttgggcgcgt gcatcctgaa caaactgcac gcatgcgcct cgatggcttt
       61 ccttgggcac agtatggcag tatcgtggtc aaggtcgacc gcgtggcgcg cgagatccgt
      121 aacggtcgag tacgcgtcga atttcttccg aactctccgg acgattccag cctactgctg
      181 cagcacggct tgccgggctc ggtcgaggtc gagattgagc agaccacacc cgccgtgttg
      241 gccttgcgtg cggcgggtca gaatttgacc agacccgcgc agcagagcga gcaagttgcg
      301 agatccaatc cgtgagtgtg ttcccggtcg gcaaacggca acgccgctgg tgggtccccg
      361 aggtcgtgca gacctcggcg atggactgtg gtcccgcggc gctaaaatgt ctactggaag
      421 gctttcatat cccagccagt tatggacgcc ttcgcgaggc gtgccaaacc tctgtggatg
      481 gtacgtccat cgatgtcatc gagaccgtcg cgcggcaact tggcttagac gccgagcagg
      541 tcatgctgcc gggggattat ctatggcttc ctgaggccga ggcgctgccg gcaatagtgg
      601 ttgtccgtca atccaatggc tttacccatt tcgtggtcgt ctggcggcgg cacggtcgtt
      661 ggctacaagt catggatccg ggggtgggac ggcgctggac gacctgtgac agcttccttc
      721 gggagatctt tctacatagc gtccgcgtgc ctgcggccgc ctggtacgac tgggccacct
      781 ccagcgatac acttgagata ttcgccagtc gactgcgttt gctcggggcc tctacttcag
      841 cggcgtataa gctagtcaac cgtgccaagg atcaagcgac ctggcatgcc atggcggcgc
      901 tcgacgccgc atcgcggatg ctagggagcc tcactgccgc cggtgggctc cggcgcggag
      961 cgagcactat acgcttactg gaaagcctac tggcacgtac cgctcaggaa acgccgggtg
     1021 cctgcgtggc ggtccccgcc acctactggt cggttgtacc ggcattagcc gaaagtgagg
     1081 gtgaggctga ccacttaatg ctccgcggcg cggtactcct ccgcgtgcgt ggacgcttgt
     1141 ctcccgcgaa tggatcggaa aacgaagacg cgctggctcc tgagctcgcc gccgcgttga
     1201 gcgaacggcc cgtgcgccca atgcgggaat tgtgggcctt ggtgcgtgcg gacgggatac
     1261 tgaccccact cgccttgatg ggtgctctcg ggcttgccgt gggggctttg gtggtcgaag
     1321 ccttgctgtt tcgcggattt tttgatctcg cgagagatct caatgtagtg ggccagcggg
     1381 ttgtcgcttt cagtgcattg ctatcgttcg tgacgctgtt gtgggcattt gaacttccta
     1441 tcatcagcga gtccttgcgt ttggggcggc acctcgagac ccgtttgcgt ttgttattgt
     1501 tacaaaagct gcccaagctc aacgatcgct atctccaaag tcgccccgtc tcggacatgg
     1561 cagaacgtgg ccacagtatc tatctgttgc gctacttacc cgatctggcc attcgttccg
     1621 tgcagtcggg ttgggaattg atgtttacct tggtgggtat tggctgcatc gcccctcaaa
     1681 gtctgccggt cgcattgggg atcgcggcgc tgacagtggg actcccaatc gtggcacagc
     1741 cggcggtgag tgaacgagac ctccgggtcc gtagccacgc gggggcctta cagggctttt
     1801 atttggatgc gttgctgggc attgcgccga tccgtacgca ttccgcggaa cgttccgtgc
     1861 ggcgtgagca cgaaggcttg ctggtcgagt gggcacggtc agccaaaagc cttattcgtc
     1921 tctcactttt ggtgaaggga gcgcagtcga cggtctgttt gtcgttagcg ggatggctct
     1981 tgctcacgca tatccagaca gtgggcgtca cgggcaacct gctgctcttg gtttattggg
     2041 ttctcaagtt gccttcgctt ggggaaggcc tggctgcact ggcgttgcaa tatcccactc
     2101 agcacaacat tgccttacgt ttgctcgaac ctatcaaagc cccggaagag gcgatattaa
     2161 tctccaaacc agacgtcgaa caaccgctag gagagcgaga gcctgctgcg cctcaacagg
     2221 aaccccggtt ggtcaaaaag acttcaggac ttgcgctcga catccagggt gtcaatgtgg
     2281 tcgcagccgg gcatacgcta ctacgagata ttcgactaag cattgccccg ggcgaacata
     2341 tcgccattgt ggggccatcc ggtgctggca agtcgagtct gttaggactg ttgcttggct
     2401 ggcatcaagc cgctgggggc tcaatcttt
//
LOCUS       DASQSL010000891         1024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_75462, whole genome shotgun sequence.
ACCESSION   DASQSL010000891 DASQSL010000000
VERSION     DASQSL010000891.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75462"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..878)
                     /locus_tag="VE844_09140"
     CDS             complement(<1..878)
                     /locus_tag="VE844_09140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01507.1"
                     /translation="MSQLIAMIVRIDDVNKPEELNEVWRQPLPQVSLEGLEAAHYLDG
                     LEEQVREVGWALMRQLIVEQWRLTDRALVTAYQERHREAAVREDGYDELQAVSRFGVI
                     QLPRQVCYNAEADCHVLPGNTALPPHNGQVTTRGLQEWVCLLPQDVPFATAQRLLGWL
                     TREVEVISTTQVRRWVQHHGQLIRQAEQGEVQALLEHESLSDWQACLAPLQTPRRSAA
                     WDQTLNEAVEHVLAQPDQSPPAGASASDWERVLQARRGETEIERLRRLGPQLQPGEIV
                     ASTDEVGVRRPEKRRWL"
BASE COUNT          202 a          334 c          270 g          218 t
ORIGIN      
        1 agccagcgcc gtttttcggg gcggcggacg ccgacctcat cggtgctggc cacaatctcg
       61 ccgggttgga gctggggacc caaacgccgt aggcgctcga tctcggtctc acctcggcgc
      121 gcttgcagca cacgctccca atcgctggcc gaggccccgg ccggtggcga ctgatcgggt
      181 tgcgctaaga cgtgctccac cgcttcattc aaggtctgat cccaggccgc ggaacgccgg
      241 ggtgtttgga ggggggccaa gcaggcttgc cagtcgctga gcgactcgtg ttccagcaat
      301 gcttgaacct ccccctgttc ggcctggcgg ataagctgcc cgtgatgctg gacccaacgc
      361 cgcacttggg tcgttgagat gacttcaacc tcccgcgtta accaccctaa caaccgctgc
      421 gcggtcgcaa acgggacgtc ttgcggtaac aaacagaccc attcttgcaa cccccgggtg
      481 gtcacctggc cgttatgggg cggtagagcg gtattgcctg gtaatacgtg acagtctgcc
      541 tcggcgttgt agcacacttg gcgggggagc tggatcaccc caaagcggct aacggcctgc
      601 aactcgtcat aaccatcctc cctgaccgca gcctcccgat gtcgctcttg ataagccgtg
      661 accaaggcgc ggtcggtcag acgccattgc tccacgataa gctgacgcat cagcgcccag
      721 cccacctccc ttacctgctc ttccaatccg tccaggtaat gcgccgcttc caacccttcc
      781 agactcacct gtggtaacgg ctggcgccag acttcgttta gttcctccgg tttgttcaca
      841 tcatcaatgc gtactatcat tgctattaac tggctcatgg taatctcctg ctacttagcc
      901 gactttgata aggctactgt agcagctcac tccgtgagcc agttatctta attcagcaac
      961 ccagcgcttt ggcgcgctaa caaaaactga cccgaatctt caacaaaaaa cattccaaga
     1021 aatc
//
LOCUS       DASQSL010000892         1096 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_47306, whole genome shotgun sequence.
ACCESSION   DASQSL010000892 DASQSL010000000
VERSION     DASQSL010000892.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47306"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..336
                     /locus_tag="VE844_09145"
     CDS             <1..336
                     /locus_tag="VE844_09145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01508.1"
                     /translation="ESMEENQMQQQDFGQTVMDLAEAAAVQAEVAHDRLALEWAQLVV
                     TRLLRVWKQLEAHEALAYEDKVAAQVRIMDEATSSLWHLHKSLVRTSRTLKSHQQQLK
                     HLKTPASVA"
     gene            718..1041
                     /gene="cutA"
                     /locus_tag="VE844_09150"
     CDS             718..1041
                     /gene="cutA"
                     /locus_tag="VE844_09150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013536857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010038 - response to metal ion [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent-cation tolerance protein CutA"
                     /protein_id="HZC01509.1"
                     /translation="MDEYIQVLTTTATREDAQAIADALVENHLAGCVQIIGPIVSTFR
                     WQGAIERTDEWLCLIKTEKRLYLTLEQLIKTQHTYDTPEIIAIPIVAGSQSYLQWLSR
                     ELHPA"
BASE COUNT          246 a          340 c          306 g          204 t
ORIGIN      
        1 gaatcgatgg aggaaaacca gatgcagcag caagacttcg gtcaaaccgt gatggacctt
       61 gcggaggcag cagccgtcca agcagaggtg gcccacgacc ggctcgcgct ggagtgggcg
      121 cagctcgtcg tgactcgcct cctccgggtg tggaagcaac tcgaggcgca tgaagccctg
      181 gcctatgagg ataaagtcgc cgctcaggtg cgtatcatgg atgaggcgac ctccagcttg
      241 tggcacctgc acaaatcatt ggtccgcact agccggaccc tcaaaagcca tcaacagcaa
      301 ttgaagcacc tgaaaacccc ggcctccgtg gcctaagctc gactcggccg cccgtcgtcg
      361 gcttcgacag gtcgccgaag ggctggcaca aaagggacat gtggctgctg gccgatcatg
      421 tcgccagtct tctttccctg cgccatccta gatcagcgcc atcagtccct gctggtacct
      481 tttgctaccc ataatcgtct caatatgaca tagtgggaac ttattgatag cgagctgcta
      541 cgggcggagc agacaccgca aaaggggcga aatatcgacg gtcgtgggaa agacatgcga
      601 tgaaggggat cgacaccgcc gattgggtgg tcaccccgca gggtatcgcg ccagacgtcg
      661 ctaggacctg cctctcgcct gctcccggcg agggcacaca caagctggga ggatgcgatg
      721 gatgaatata tccaggtttt gaccaccact gcgactcgag aagacgccca ggccatcgcc
      781 gacgccttgg tcgagaacca cctagccggg tgtgtgcaga tcatcgggcc tatcgtcagt
      841 acgtttcggt ggcaaggcgc gatcgaacgc accgacgaat ggttgtgcct gatcaagacc
      901 gagaaacgcc tgtaccttac gctggagcaa ctcatcaaga cgcagcacac ttacgacaca
      961 ccggagatca tagccattcc cattgtcgcg ggcagccagt cgtatttgca atggctttcc
     1021 cgtgaactgc accccgccta acagacttta cccgatattc tcttcatccc tcccccatca
     1081 cccccctccg ccgtcg
//
LOCUS       DASQSL010000893         1419 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_168024, whole genome shotgun sequence.
ACCESSION   DASQSL010000893 DASQSL010000000
VERSION     DASQSL010000893.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1419)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1419)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1419
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168024"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(82..696)
                     /gene="lexA"
                     /locus_tag="VE844_09155"
     CDS             complement(82..696)
                     /gene="lexA"
                     /locus_tag="VE844_09155"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: protein motif:HMM:TIGR00498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HZC01510.1"
                     /translation="MMKRPTTDLTGKQARVLECIGQWIQEQGYPPTFQELAHELHLTE
                     KNARDYVLILERKGYLRRQPNVARGITLLKQETPEPLPEIPFIGRVMAGQPVEVFESH
                     EPILVPPLLLRAGTHFVMEVRGDSMIDDGIREGDLVIVQQQSAPHNGDTVVAVVDGEA
                     TIKRYYQRGRTVELRPANAHMAPIQVEADAVEIKGVVAGLMRKY"
BASE COUNT          289 a          421 c          412 g          297 t
ORIGIN      
        1 gatctgaccc tgaacgtgag attggcgtgc gattggatat gacttcggca ttgtgtcgtc
       61 tcctctcaga agtccgcgac cctaatactt gcgcattaga ccggcgacca cacctttgat
      121 ctctacagcg tccgcttcga cttggatcgg cgccatgtga gcgttggccg gtcgcaactc
      181 gacggtacgt ccgcgctggt aatagcgctt gatcgtcgct tcgccgtcca cgactgccac
      241 gaccgtatcc ccgttgtgag gagcagactg ttgctggacg atgaccaaat cgccttcgcg
      301 aatgccatcg tcgatcatgg agtcacccct cacctccata acgaagtggg ttccggcacg
      361 caagagcaga ggcggtacaa ggataggctc atgactctcg aagacctcca ccggttgacc
      421 agccatgacc cgcccgataa atgggatctc cgggagcggc tcaggcgtct cctgttttag
      481 cagggtgatc ccacgcgcca cattcggctg acggcggaga tatcccttgc gttcaaggat
      541 gagcacataa tcgcgcgcgt tcttctctgt caggtgtaat tcgtgggcga gctcctgaaa
      601 ggtcggagga tagccctgct cttgaatcca ttggccaata cactctaata cccgcgcttg
      661 ctttcccgtc aggtccgtag tgggacgctt catcatatcc ccctctcagt ttgatctaat
      721 ggggatgctc tggaaccgga tggaatcata cctatgaggc gatcgcctgt caagcgaaaa
      781 ctcatcgatg aatcctcctt cgcctcttgt aggctatccc atcgtcaaca aacaaaggac
      841 ggttgacgcc gatcggaaaa atcgctatga ggggcaacgc tccacggcga tggcttgtca
      901 ggtctagagt ggcagcccct tcccaggatc gatggcgagg tataggcacg gtaacccgac
      961 agctcgattc cccgcccgac tgcctcacgg cgaagtaacg gcgtttcgcc cctaaggcta
     1021 tctgcgcttc agatgatccg cagggccgga tccgagcccg caaacgtata aggaggggac
     1081 gagatgatcc tatcatggca cgcctggcac ccgtggcacc ctgggaaggt cctctctctc
     1141 ctggcggtag tgtggctgct tctggtaacc agtggaggtg tggagcacgg ggcctgcgga
     1201 ggcgcggcgg aggcacgtgg tggcgctctc gtggggaagt tagaaggccc agagaccgtc
     1261 accgattctc agacccctac caggcgctgc ccatcgtcat ggccggccag ggcccgatca
     1321 tgggtcacac caaggaaggc atgaccggca tgggcggctt tgcgccggct caccacttga
     1381 agcagtttca ccccagatat gtgtccaagg aggagctgg
//
LOCUS       DASQSL010000894         1024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_195671, whole genome shotgun sequence.
ACCESSION   DASQSL010000894 DASQSL010000000
VERSION     DASQSL010000894.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195671"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..271)
                     /locus_tag="VE844_09160"
     CDS             complement(<1..271)
                     /locus_tag="VE844_09160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01511.1"
                     /translation="MHEIPIEVVSRAEAGDILCSPQGCADVTCLISIGEPHNDLPRGF
                     ENVARRLRRTFADHVDGEYGPTEDDVRSIIELAESLRSSAGKVLIH"
BASE COUNT          168 a          359 c          259 g          238 t
ORIGIN      
        1 agtggatcag caccttcccc gcagatgagc gcaagctctc ggccagctcg atgatgctgc
       61 ggacatcatc ctctgtcggg ccgtattccc cgtcaacatg gtcggcgaaa gtccggcgca
      121 gccgtcgagc gacattctca aagcccctag gcagatcgtt gtgaggttcg ccgatggaga
      181 ttaggcaggt cacatcagca caaccttgcg gggagcacag gatgtcaccg gcctctgccc
      241 gactgacgac ttcgataggg atctcgtgca tatccgcctt caccgctggt tacatctgag
      301 ccgcctccgc ggtagggacg ccggttaccc ggcgcccccc gcacagaccc ggacgtgcag
      361 tattcccgca tccggttcct cggttgcact cgcttccgcg caggctaaaa ccgttaccgg
      421 tcctccgcct gtttgctgtt ccccgcagtg aggttggctc attctagtcc ggcccgacat
      481 gtccgggatg agtttccttt gcgggctacg tgcttccgtc aggtccttcc ccatgtagtg
      541 ggctttcccc acctccgagt actattcctg ataagactcc ccatcggcat ccggcgggct
      601 ttccctttca cagtactcct ccgcctgcct gtaccgcttt ccactccaac gcttaggttc
      661 cccgcctaac cctgtgtccg ggtttcccct tgcgtgcctc cgtagcggta tactttacct
      721 tggagcttcc cacggccagg agtgcatggg gcctcccaag ttcttcgatg tatctcttgc
      781 ctctcatgcc acggcctgag gactccggcg gacctccata ccctcaccat cacgggtgct
      841 tcgtgttgcc ttcgggcacg ttaaaaccct cggcctccgc aacaagctca tctcgaagct
      901 gtaccagcac aaaaggcgtg cgcgtcaccc ctacggcctc caggatgctc tatctacgct
      961 tcgcctgttt tgttcgccgc cttccggcga ctccgcctca gagcctgtct gaaaagtatc
     1021 aagc
//
LOCUS       DASQSL010000895         1123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_75486, whole genome shotgun sequence.
ACCESSION   DASQSL010000895 DASQSL010000000
VERSION     DASQSL010000895.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75486"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..666)
                     /locus_tag="VE844_09165"
     CDS             complement(<1..666)
                     /locus_tag="VE844_09165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01512.1"
                     /translation="MPSRVQFAPEIEPLVQFIEETAPSEIVDQTLAKLRAGVSIETMI
                     TASALAVTRSSDLPPGHHGGPLHPLVGLHAVYHITERLSGEDRFLPVLQHVALTNKHI
                     HHPGMGPYMLPDFEPVDAGGVEATKRAFLAAVDRGLSNLADHYFLWLWQHIPPVEALD
                     LLLTVALPKNLLDDHYFIFPALTWRALEWMGQDYLPVLMRPAVRYVTRFPTPQAIPEI
                     EAVL"
BASE COUNT          243 a          320 c          335 g          225 t
ORIGIN      
        1 gaggaccgct tcgatctcgg ggatggcctg cggcgtaggg aagcgtgtga cgtagcgcac
       61 cgctggtcgc atgaggaccg gcaggtagtc ctggcccatc cactccaacg cccgccaggt
      121 caaggccgga aagatgaaat aatggtcatc caggagattc ttcggaaggg cgaccgtcag
      181 gaggagatcg agggcctcga cgggtgggat gtgctgccac agccagagga aataatgatc
      241 ggccaagttg gacaggccgc ggtcgaccgc cgcgaggaaa gcgcgcttcg tggcctcgac
      301 cccgccggcg tcaacgggct cgaaatcggg caacatgtac ggccccatgc ccgggtgatg
      361 aatatgcttg ttggtgaggg caacgtgttg cagcacgggg agaaaacggt cctcccccga
      421 cagccgctcg gtgatatgat acacggcatg caggccgacc agcggatgca acggcccgcc
      481 gtgatggccc gggggtaggt cggacgagcg ggtcacggct aaggctgaag cggtgatcat
      541 ggtctcgatc gacacccccg cccgcagttt cgccaaggtc tgatcgacga tctcactcgg
      601 agcggtttcc tcgataaact gcaccaaagg ttcaatctca ggggcaaact gcacacggct
      661 aggcatcgtt cctctcctcc tcttgtcggc atctcaattc cgggccagat catccattca
      721 tgcgtgacgt tttccctgca cgtcgcgaga cctgccctgc accagaccca tccagcttta
      781 tcgccaaggt gtcatgcatg agattacaca caggcgatct cgctgacaac cttatttttc
      841 agaatttttc agatgagcat tcttttcctt tgcctaggcg tcgctggtgt gagttgaaac
      901 cactagcaca ctctaggttc gcggcccagt aaaaatcacc ggcggctcat agtaaatatg
      961 ctaggatggg tgcggtgcaa ctggtacaag gagtgcccgt ggcggtggcc acccttgaca
     1021 agccaacgct ggccgcaacc agccagcgtt gtttattgag cgttcatctt ataatccaag
     1081 atatagctgg tgcgacagac gtgagcgatc atgcccggaa ttt
//
LOCUS       DASQSL010000896         1811 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_102285, whole genome shotgun sequence.
ACCESSION   DASQSL010000896 DASQSL010000000
VERSION     DASQSL010000896.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1811
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102285"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(219..1604)
                     /locus_tag="VE844_09170"
     CDS             complement(219..1604)
                     /locus_tag="VE844_09170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01513.1"
                     /translation="MKANSYCMPEACAEANPSVQLVQIEVSPAHPLLVLKRALPWEAI
                     TEAMTRHWRVHGKNVDGGPGLPWDVSLYVPLVVLMLIKHFDSRQMEAYLAENVVARVF
                     IGRQREVHAQIRDHSNIARAYGALGKAGIDEVTCLVIQEAHRFGFVDEGVMSSDTTAQ
                     ELAIGYPNEPGILRGLAQRCGRALRRLKKRGIQGLDAALEQSETILRSVKEHHLFTKG
                     REEKRQVLTRILTEVGELMVQTRPLVERLGTSWNRVIQSARSRLMAMHEVIKPLMGQI
                     VHWLTTGKVAVNKIVHVGIPQARAIVRNKAGKKTEFGLAYLISPLGGGYVFGERMRAN
                     ADERQMPLKALAGYRAIFGPQATPELVVYDRGGDSTPTRQRLALEGVRDVGIQPKGKR
                     PWSVAEGVRARIRSERGQTEGVIGTLKSNRYQFNKPKERLWHTLEMAGPRSILSFNLN
                     KLMRDLVALTR"
BASE COUNT          353 a          574 c          472 g          412 t
ORIGIN      
        1 gcaatcgcat tataaatttc cagtcataac aataagatag tacattgtcc aggcgctatg
       61 agctcttatg agcctgcttg tggtatcact ctcaagccgc tcatctacgt agagcgtgtc
      121 gcagaattca ttggaggtca tctggtcctc catttctttc ttttctctct gtatatctcc
      181 tctatgctga cttcgttccg ttcgtttctg tcgatccctt agcgggtcag ggccaccaaa
      241 tcccgcatca atttgttgag attgaacgag aggatagacc ttggccccgc catctccagc
      301 gtgtgccaca gacgttcctt cggtttgttg aattggtacc ggttgctttt gagtgtccca
      361 atcactcctt cggtctgacc ccgctcgctg cgaatccgcg cccggactcc ctcggcaacc
      421 gaccagggcc gcttgccttt gggctgaatc cccacatcgc gcacgccttc caatgccagt
      481 cgctggcgcg ttggcgtcga atcgccaccc ctgtcgtaga ccaccaactc cggcgtggct
      541 tgtggaccaa agatggcccg gtagcccgcc agggctttga gcggcatctg tctttcgtcc
      601 gcattggccc tcatgcgttc gccaaacaca tagccgccgc ccagagggct gatcagatag
      661 gccaagccaa attcggtctt tttgcccgcc ttgttgcgca cgatggcgcg cgcttgagga
      721 atccccacat gcacgatttt gttgaccgcc actttgcccg tcgtgagcca gtgcacgatt
      781 tgacccatca gcggcttgat cacctcgtgc atcgccatga gccgcgagcg cgcactctga
      841 atgacccgat tccaactcgt gccgagacgc tcgacaaggg ggcgcgtttg caccatcagc
      901 tcgccgactt ccgtcaatat ccgggtcaac acctggcgtt tttcctctcg gcccttggta
      961 aacagatggt gttctttgac cgagcgcaaa atcgtctcgc tctgttccaa ggccgcatcg
     1021 agtccctgaa tacctcgctt tttgagccgc ctcaaagccc ggccacagcg ctgcgccaac
     1081 ccccgcaaaa tccccggttc gttgggatag ccaatggcca actcctgagc cgtggtgtcc
     1141 gatgacatca ccccctcgtc gacgaagcca aagcggtgtg cttcctggat caccaagcag
     1201 gtcacctcgt cgatacccgc cttgcccaat gccccatagg cccgagcaat gttggagtga
     1261 tcccgaatct gggcgtggac ctctcgctgg cgcccaataa acacccgcgc caccacattc
     1321 tcggccaggt aggcttccat ttggcgcgaa tcgaagtgct tgatcagcat caacaccacc
     1381 aagggcacat ataaggaaac atcccagggc aagcccggcc caccatcgac gtttttgcca
     1441 tgcacgcgcc agtgacgcgt catcgcttcg gtaatggctt cccagggcag ggcgcgtttc
     1501 aacaccagca ggggatgggc tggtgagacc tcgatctgga caagctgaac actgggattt
     1561 gcctcggcac aagcctcggg catacaatag gaattggctt tcatggtgtg ctcctggtct
     1621 ggtgatcgtc tccataacac cagaaatacc agaaggcacc tcgaaggggc aagtccgtgc
     1681 tggttttggg gcctgtggag gcccctcagg cattccttcc aggctctact ccgcgactcg
     1741 ctctacgtac ggggtgcggg tggagcgcga ggggtatcaa ccccagcagc gagacgtggt
     1801 gatacgggat c
//
LOCUS       DASQSL010000897         1879 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_168036, whole genome shotgun sequence.
ACCESSION   DASQSL010000897 DASQSL010000000
VERSION     DASQSL010000897.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1879)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1879)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1879
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168036"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1269)
                     /gene="glpK"
                     /locus_tag="VE844_09175"
     CDS             complement(<1..1269)
                     /gene="glpK"
                     /locus_tag="VE844_09175"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015909396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004370 - glycerol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006071 - glycerol metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HZC01514.1"
                     /translation="MAKYVAAIDQGTTSTRCMIFDPSGQAVSIAQQEHRQIYPASGWV
                     EHDPLEIWTCTQAVIRAALAKAKTTPQDLAALGIANQRETTVLWQKQSGRPVYNAIVW
                     QDTRTADLCHTLARAGGQDRFRPKTGLPLATYFSGPKIKWMLDTVPGVRKQAEDGEVL
                     FGTIDTWLIWNLTGGPQGGMHITDVTNASRTLLMNLETLDWDPEILEILGIPRPMLPA
                     IHASSEVYGTARGDLAGVPVGGDLGDQQAALFGQCCFEIGEAKNTYGTGCFMLLNTGA
                     KPIPSTSGLLTTLAYKIGEASPIYALEGSIAITGALVQWLRDNLGLIEKSADIEALAN
                     TVEDNGGIYFVPAFSGLFAPYWRADARGAIVGLTHYINKGHIARAVLEATAYQTREVL
                     EAMHKDAGVRLSALKVDGGMVGNHTLMQFQA"
     gene            complement(1297..1701)
                     /locus_tag="VE844_09180"
     CDS             complement(1297..1701)
                     /locus_tag="VE844_09180"
                     /inference="COORDINATES: protein motif:HMM:NF027463.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4845 domain-containing protein"
                     /protein_id="HZC01515.1"
                     /translation="MRRLSGQRGLSFWGFLFVCAFIGFIALAVIRLFPLYMESFKVST
                     AIEAMANMTGVATKSGREIQTSLLRRFEIDDVDRFTEHNIKNHLAIKPNEDGKGRTLT
                     MAYEARGPLLGNLDAVLKFDKSILIPGTGQGE"
     gene            complement(1750..>1879)
                     /locus_tag="VE844_09185"
     CDS             complement(1750..>1879)
                     /locus_tag="VE844_09185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015005884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="S26 family signal peptidase"
                     /protein_id="HZC01516.1"
                     /translation="KDSRYWGTVPDENLNGKAFMIWMNWDNKNGGIDWSRIGDLIQ"
BASE COUNT          388 a          534 c          554 g          403 t
ORIGIN      
        1 ggcttgaaac tgcataagcg tgtgattacc caccatgccg ccatcgacct tgagggcact
       61 gagacgcacg ccggcgtcct tatgcatggc ctcgagcacc tcacgggtct gataggcggt
      121 ggcttcgagc acagcgcggg cgatatggcc tttattgata tagtgggtca agccgacgat
      181 agccccacgc gcatcggcgc gccagtaggg ggcaaagagg ccggagaagg ccgggacaaa
      241 atagatgccg ccgttgtcct cgacggtatt ggccagcgcc tcgatatcgg ccgacttctc
      301 gatgaggccg aggttatcgc gcaaccattg gaccagggcg ccggtgatgg cgatagagcc
      361 ttccagcgca tagatggggg aagcctcgcc gatcttatag gccagcgtcg tcaagagacc
      421 gctggtggag gggatgggct tggcgccggt attgagcagc atgaaacagc cggtgccgta
      481 ggtattcttg gcctctccta tctcaaaaca gcactggccg aacagagcgg cctgctgatc
      541 acccagatcc ccgcctacag ggacacccgc cagatcaccc cgggccgtgc catagacctc
      601 gctggaggcg tggatggccg gcagcatcgg acgtgggata ccgaggatct caaggatctc
      661 agggtcccaa tccagggttt ccaggttcat caggagggtg cggctggcat tggtgacatc
      721 ggtgatgtgc ataccgcctt gcgggccacc ggtgaggttc cagataagcc aggtatctat
      781 agtgccaaac aagacctcgc catcctccgc ctgtttgcgg acccctggga cagtatcgag
      841 catccatttg atcttgggac cggagaaata ggtcgcaagc ggcagtccgg tcttaggccg
      901 gaagcgatcc tggcctcccg ctcgggcgag cgtgtggcaa aggtcagcgg tacgggtatc
      961 ctgccagacg atggcgttat agacaggccg gccactctgc ttctgccaca ggacagtggt
     1021 ctcgcgctgg ttagcgatgc ccagggcagc gaggtcttgg ggagttgtct tggccttggc
     1081 caaggccgct cggatcaccg cttgggtgca ggtccagatc tccagagggt cgtgctcgac
     1141 ccagccggac gcaggataga tctgacggtg ttcttgttgg gcgatcgaga cggcttggcc
     1201 gctcgggtca aagatcatgc agcgggtgct ggttgtgccc tgatcgatgg ccgcgacgta
     1261 tttggccatt tttccctcat cctgccggca aagcgcttat tcaccctggc cggtgccggg
     1321 gatgaggata ctcttatcaa acttcagaac ggcatctaag ttacctaaca aaggccctcg
     1381 ggcttcatag gccatagtga gcgtccggcc cttaccatcc tcgttcggct taatcgcaag
     1441 gtggttcttg atgttgtgct cggtgaaccg atcgacgtcg tcgatctcga agcgccgcaa
     1501 tagcgaggtt tggatctctc ggccactctt ggtggccact cccgtcatat tcgccatggc
     1561 ctctatggcg gtcgagacct tgaagctctc catgtaaaga ggaaagagtc ggatcaccgc
     1621 cagggcaata aaaccgatga atgcacatac gaacaaaaag ccccagaaac tcaatcccct
     1681 ttggccggat aatcttctca tcgtaattaa tctcatcgtt acagcaggtg tttaaagtat
     1741 cttctcgcac tattggatta aatcgccgat acggctccaa tcgatgcccc cattcttgtt
     1801 gtcccaattc atccagatca taaatgcctt accgttcagg ttctcatcgg gcaccgtgcc
     1861 ccaatagcgg ctatctttg
//
LOCUS       DASQSL010000898         1788 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_47339, whole genome shotgun sequence.
ACCESSION   DASQSL010000898 DASQSL010000000
VERSION     DASQSL010000898.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1788
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47339"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            172..438
                     /locus_tag="VE844_09190"
     CDS             172..438
                     /locus_tag="VE844_09190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01517.1"
                     /translation="MTVLGHSIPWGTHIGDRRTTDAKSWYAQFKTWWADHKAAPQEAK
                     RAALKAHWGAKREAVCTQSAGAASDMVAPSHAESIAMAFRDLGV"
     gene            529..777
                     /locus_tag="VE844_09195"
     CDS             529..777
                     /locus_tag="VE844_09195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008671553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01518.1"
                     /translation="MEVYSAEIEQKMRRFSGWLSEKDRRRYAAIEAAKLGHGGVDYIA
                     RVLACDPKTIRQGLRDLDASEDEAAGRIRKKGGAAHRA"
     gene            777..1733
                     /locus_tag="VE844_09200"
     CDS             777..1733
                     /locus_tag="VE844_09200"
                     /inference="COORDINATES: protein motif:HMM:NF033519.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAzo13 family transposase"
                     /protein_id="HZC01519.1"
                     /translation="MAQPTLEANLRALLQEFTTGDPMREGVLWTNLSLRELSRRLLAM
                     GTPASRRTIRRLLRTLQVGCRTARKKKTMGHHPDRNAQFENIARLRREYEASGDAVIS
                     IDTKKKELLGNFHRAGTTFTAETVETFDHDFASASPGKLIPHGIYDLVNHQAHIHLNT
                     SRDTSELCCDSVALWWEQGGQVANAQAKRLLILGDGGGSNSATQYLFKKDLQGLANRL
                     GLEIRMAHYPPYCSKHNPIEHRVFPHVTRAAQGVIFHSVDIARHCIERTKTTTGLGVT
                     VRILDKVYETGRQYAADFKQNMKIIFDDHLPKWNYRAVPEFT"
BASE COUNT          448 a          475 c          517 g          348 t
ORIGIN      
        1 acgccctcag ggccattgtc tatccggatc tcagaagccc tgctacagta tcttatcatg
       61 atatctattc gttggcctgt tcaatgacca ggagatataa tttctaacaa acggttggtc
      121 aacaaatcgc actataagaa acctaataga atccatataa aggaaatcac gatgacagtg
      181 ctcggacaca gcattccctg gggaacgcac atcggagaca gacgcacaac agacgcgaaa
      241 agctggtacg cacagttcaa aacctggtgg gcagatcata aggccgcgcc acaggaggcc
      301 aaacgcgccg ccctcaaagc acactggggt gccaagcgcg aagccgtctg cacccaaagc
      361 gcgggtgccg cgagcgacat ggtggcaccg tcgcacgcgg aatcaatcgc catggcattc
      421 cgtgacctcg gcgtataaag attaaggata tggtcaagaa taacttcccg atatgcatga
      481 gtcgtagtac ccttgcgaca ggataggttc tgtctcaagg agtggagcat ggaggtgtat
      541 tcagcagaga tcgaacagaa gatgcggcgc ttttccgggt ggttgtcgga aaaggaccga
      601 cgtcggtatg cagccatcga ggcggccaaa ttaggtcacg gcggggtcga ctacattgcg
      661 cgggtattag cctgtgatcc caaaaccatt cgtcagggcc tgcgcgatct cgatgcgagc
      721 gaggatgagg cagctgggcg catccgaaaa aaaggggggg ccgcccaccg cgcgtagtgg
      781 cgcagccgac cctggaagcg aacttgcgcg ccttgttgca agagttcacc acaggcgatc
      841 cgatgcgtga aggggtgttg tggacgaact tgtcgctgcg tgagttatcg aggcggctgt
      901 tggcgatggg cacaccggct agccgtcgca cgattcgtcg cttgctcaga accctccagg
      961 taggctgccg cacggcacgt aagaagaaga cgatgggtca tcatcccgat cgcaatgcac
     1021 agtttgaaaa catcgcccgc ctgcgacgcg agtatgaagc gtcaggcgat gcggtgattt
     1081 cgatcgatac gaaaaaaaag gagttgctgg gaaactttca ccgcgcaggc acgaccttca
     1141 ccgccgagac ggtggaaacc tttgaccatg attttgcttc ggcgagccca ggcaagctga
     1201 tccctcatgg tatctatgac ctggtgaacc atcaggcgca catccacctc aatacgagcc
     1261 gcgacacgag cgaattgtgc tgtgacagcg tagcgttgtg gtgggagcaa gggggccaag
     1321 tggccaatgc ccaggccaag cggctcctga tcctgggtga cggtggcggt agcaacagcg
     1381 ccacacagta tctgttcaaa aaagacttgc aaggcttagc caatcgtctg gggttagaga
     1441 ttcgtatggc ccattatccg ccctactgtt ccaagcacaa tccgatcgaa caccgggtgt
     1501 ttccgcatgt cacgcgggcc gctcaggggg tgatctttca cagcgtcgac attgcccggc
     1561 actgcatcga acggacaaaa accacgacgg gcttgggcgt gacggtacgg attctggata
     1621 aggtgtatga aacagggcgc caatacgcgg ccgatttcaa acaaaacatg aagattatct
     1681 ttgatgacca cctgcccaag tggaactacc gggctgttcc cgaattcacg tgaaaacggg
     1741 aacttgtttt tgaccatatc ctaagcgggg agttccaccc ccttgcag
//
LOCUS       DASQSL010000899         1395 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_7300, whole genome shotgun sequence.
ACCESSION   DASQSL010000899 DASQSL010000000
VERSION     DASQSL010000899.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1395
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7300"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..457)
                     /locus_tag="VE844_09205"
     CDS             complement(<1..457)
                     /locus_tag="VE844_09205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012459565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HZC01520.1"
                     /translation="MFIDEAKIFVKAGEGGRGCMSFRREKFVPKGGPDGGDGGKGGDI
                     VLQADRNLRTLLDFRYKQRYTAERGEHGRGKDQTGRDGSDCILRVPVGTMVRSMEAGE
                     VLADLTVHEQRFVAAQGGRGGRGNTRFKSPTNQAPRHAEPGERGEARWLT"
     gene            complement(457..735)
                     /gene="rpmA"
                     /locus_tag="VE844_09210"
     CDS             complement(457..735)
                     /gene="rpmA"
                     /locus_tag="VE844_09210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014066692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HZC01521.1"
                     /translation="MAHKKAGGSSGNGRDSIGKRLGVKRFGGQYVTAGSILVRQRGTI
                     FKPGLHVGLGRDYTLYAKIDGIVQFRTGRGGRRYIGIEPTVSDVTSNS"
     gene            complement(878..1210)
                     /gene="rplU"
                     /locus_tag="VE844_09215"
     CDS             complement(878..1210)
                     /gene="rplU"
                     /locus_tag="VE844_09215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015596436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HZC01522.1"
                     /translation="MYAVIQTGGKQYRVSQGDLVTVEKLEGTAGDRVEIDSVLMIGAG
                     TQVTVGQPYLAQTRVVGTIVRQERGPKVIIYKHKRRKGYQKKQGHRQWQTLVRVTDIV
                     TGSGGEPA"
BASE COUNT          297 a          436 c          349 g          313 t
ORIGIN      
        1 gggttaacca gcgcgcctct cccctctccc caggctctgc gtggcgagga gcttggttcg
       61 ttggtgattt aaagcgtgtg tttccacgac cgcctcgccc cccctgcgcc gcaacgaacc
      121 gttgctcgtg caccgtgaga tccgccagta cctcgccggc ttccatgctg cggaccatcg
      181 taccgacagg cacacggaga atacagtcac tgccatcacg tcctgtttga tccttgccgc
      241 gaccgtgttc gccgcgctcc gccgtgtagc gctgtttgta gcgaaaatct agcagggttc
      301 ttaagttgcg gtcggcctgt aggacgatgt cgcccccttt gcccccatct cctccgtcag
      361 gaccaccctt gggcacgaac ttctcccgac ggaagctcat acaaccacgc cccccctctc
      421 cagctttgac gaaaattttc gcttcatcga tgaacattag ctattacttg ttacgtccga
      481 tactgtgggt tcaatgccaa tataccggcg cccgccccgc cccgtccgaa actgtacaat
      541 gccgtcgatt ttggcataga gggtgtaatc acgtccaagc cctacatgaa gccccggctt
      601 aaagatagtg ccacgctgtc ggaccaaaat gctccctgcg gtcacatatt gcccgccgaa
      661 gcgcttgacg ccgagacgct tgccgatgct atcgcgcccg ttacccgaac tgcccccagc
      721 ctttttgtgc gccatggcgc tgcctccatt acctaagtcg aaacaccttc agaacctata
      781 agaccaatca tgatgagtgg cgaaacaccg gaaaatttga acggaggggt acagcgctgt
      841 gcccagtatg acaatcgcgc gggtcataga acctgtgcta agccggctca ccccccgagc
      901 ccgtcacgat gtctgtcaca cgtaccaagg tctgccactg acgatgcccc tgtttttttt
      961 ggtaaccttt gcgccgtttg tgcttataga tgataacctt aggcccacgc tcttgcctga
     1021 cgatcgtgcc taccacacgc gtctgagcta ggtagggctg tccgaccgtg acctgagtcc
     1081 cggcaccgat catgagcaca gaatcgatct caacccggtc ccccgcagtg ccttcgagct
     1141 tttcaaccgt cactaggtcg ccttgtgaaa cgcggtattg ttttcccccg gtttggataa
     1201 ccgcatacat tgaagttccg cctctccatg accagaatga gtgatgcatc ccaaaggaaa
     1261 atgcaagttt ggaaatatag caaaagatgg gccagaagtc aatttgctcc gtcgccaaca
     1321 gagactcgaa ggaatacagt ctgacagtct aggcatgaag atcggggcag gtgaaggggg
     1381 ggtattgagc cgagc
//
LOCUS       DASQSL010000900         1362 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_195713, whole genome shotgun sequence.
ACCESSION   DASQSL010000900 DASQSL010000000
VERSION     DASQSL010000900.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1362
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195713"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..430
                     /locus_tag="VE844_09220"
     CDS             <1..430
                     /locus_tag="VE844_09220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01523.1"
                     /translation="STLTEKPFAQRVASVGLFHRAKRIVGRAKHLQGHCYVFAAHLYQ
                     TAHKHWASALVGALLYVKGRSIPRLVGDLAQQLRLPAEVRHVWVVDRGIVSRPRVAVL
                     RPVRPVCAWARALKPGLLLRATPSTPAGPPPDLRTEVPGR"
     gene            339..971
                     /locus_tag="VE844_09225"
     CDS             339..971
                     /locus_tag="VE844_09225"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01524.1"
                     /translation="MRSNQVFYFAPRRQPQRGRRRIYGQKCRVDKLIKCFPERLRHQT
                     ATLKVRGKARTVRIYDAEMLWRGVWHDRPCPVRLIIVVVPGLRLKPWYLLTTDLELTP
                     LEAVQAYSGRQQIEVNFDEGKELGLGHYQGRSGEGVRRWPVFLCIAHTLLKLLATQAL
                     HIELPALNWSWYKRENTAGQVRRCLTAACRPPISRTKASDPTAEKMKQAA"
     gene            complement(974..>1362)
                     /locus_tag="VE844_09230"
     CDS             complement(974..>1362)
                     /locus_tag="VE844_09230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01525.1"
                     /translation="SAARETAIPVVEDYVLAEWASEQATLAANVYKRPEELSRFAEIV
                     RAYGGDTGDLPIAFSAEGWMSFPEITKWANTHDHVLLIDDFEVRYDREGKKLKLEDGV
                     LAVSHDRSTVHILSSCSSRFLSRLVC"
BASE COUNT          287 a          402 c          362 g          311 t
ORIGIN      
        1 ctcgaccttg accgagaagc cgtttgccca gcgtgtggct tcagtgggac tgttccaccg
       61 cgccaagcgc atcgtcgggc gggccaaaca cctccaaggc cattgttacg tcttcgcggc
      121 gcacttgtat cagacagctc ataagcactg ggccagtgca ctggtcggcg ccttgctcta
      181 tgtcaaaggg cggtccattc cgcgcttggt cggtgattta gcccagcagt tgcgtttacc
      241 tgcggaggtg cgtcacgtct gggtggtcga tcgcggcatc gtcagtcgcc cccgggtagc
      301 agtccttaga ccggttagac cagtatgtgc ttgggcgcgt gcgctcaaac caggtcttct
      361 acttcgcgcc acgccgtcaa ccccagcggg gccgccgccg gatttacgga cagaagtgcc
      421 gggtagataa gttgatcaaa tgctttcccg agcgcctgcg ccaccagacc gccaccctca
      481 aggtacgcgg gaaagcgcgc accgtgcgta tctacgacgc tgaaatgcta tggcgggggg
      541 tgtggcacga ccgcccctgc cccgtgcgcc tgattatcgt ggtcgtgccc gggctgaggt
      601 taaaaccctg gtatctgctc accaccgatt tggagctcac cccgttagag gccgtccagg
      661 cctacagcgg acgccagcaa atcgaagtca acttcgacga gggcaaagag ttgggcttgg
      721 ggcattatca aggccgcagt ggcgaaggcg tacgccgttg gccggtcttc ttatgcatcg
      781 ctcatacgct cttgaagttg ctggcaaccc aagccttgca catcgagttg cccgcgctca
      841 actggtcgtg gtacaaacgg gaaaataccg ccggacaagt tcgacgatgc ctgaccgcag
      901 cctgccgccc acctatttct cgcactaagg cgtcagaccc tactgcagag aaaatgaagc
      961 aagcggcata atttcaacaa actaatcggc ttaaaaaccg ggaactacag cttgacaata
     1021 tatgtactgt acttcgatca tgactgactg ctaaaactcc atcctctaac ttcagctttt
     1081 taccttctcg atcataacgt acctcgaaat cgtcgatgag taatacgtga tcatgtgtat
     1141 tcgcccattt agttatctcg gggaaactca tccatccttc agcgctgaaa gcaattggca
     1201 agtcaccagt atctcctccg taagctctga caatttcggc aaatcgtgat agctcttcgg
     1261 gtcttttgta gacgttagct gctagggtcg cctgctctga tgcccactcc gctagtacgt
     1321 aatcttctac aactgggatg gcagtttctc gtgctgcgct cg
//
LOCUS       DASQSL010000901         1163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_113145, whole genome shotgun sequence.
ACCESSION   DASQSL010000901 DASQSL010000000
VERSION     DASQSL010000901.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113145"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..708
                     /locus_tag="VE844_09235"
     CDS             <1..708
                     /locus_tag="VE844_09235"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01526.1"
                     /translation="IRRYEQISIVSRTSVVTWNLIFSYLLSLRSLPERLRLKRNPQPS
                     AGVVDSQSVKTTGVGGEQCVYDGGKKVKGRKRHLLVDTQGLVLKAKVHSAKVQDREGI
                     KVLLDLAPKHLPRLSHLWMDAGYTGEGRGADWVQRMLGWTAEIVRHPPKLAPEEVMRR
                     WVKECAKEGVAIDPEKLSGPRRFGDLPRRWVVERTFSWLGQNRRMSKDYERLTETSEA
                     FVYVAMTRVMVRRLARS"
     gene            complement(805..1017)
                     /locus_tag="VE844_09240"
     CDS             complement(805..1017)
                     /locus_tag="VE844_09240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01527.1"
                     /translation="MKAKELTCNNCGFDYLEAYEAIFPIYEADVLDVTLKCRNCGAGN
                     PLWLPPEEYWRCGFDPEEGMPELDET"
     gene            complement(1085..>1163)
                     /locus_tag="VE844_09245"
     CDS             complement(1085..>1163)
                     /locus_tag="VE844_09245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013477105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HZC01528.1"
                     /translation="QHLLEDPDVVIQGDRVLHVRYRVRR"
BASE COUNT          250 a          320 c          359 g          234 t
ORIGIN      
        1 atcagacgtt acgagcagat ttcgatcgta tcgcgaacct ccgtagtgac gtggaacctc
       61 atctttagct acctcctttc cctacgctcc ctaccggagc ggttgcgcct caagaggaac
      121 cctcagccca gtgcgggggt agtggatagc caatcggtca agacgaccgg cgtaggcgga
      181 gaacaatgtg tctacgacgg cggcaagaag gtcaaaggcc gaaagcgtca cctcttggtg
      241 gacacccagg gtttagtgct caaagccaag gtccatagcg caaaggtcca agatcgagag
      301 ggcatcaagg ttctgctaga cctcgcgccg aaacaccttc cgcgcctctc ccatctgtgg
      361 atggacgcgg gctacaccgg agaaggcaga ggtgcagact gggtgcagag gatgttggga
      421 tggacagctg agatagtgcg ccacccaccg aagctggctc cggaggaggt gatgaggagg
      481 tgggtgaaag agtgtgccaa ggagggagta gccatcgatc cagagaagct ctcagggccg
      541 cggaggtttg gggatctgcc tcggcggtgg gtggtggagc gcacgttctc gtggttggga
      601 cagaacagac ggatgagcaa ggactacgaa aggctaaccg agacgagcga agcgtttgtc
      661 tacgtagcta tgacgcgcgt gatggtgagg cgcttggctc gctcatgaga cttttcagac
      721 agtttcttga cggagttctc ggaagttggc cggtacgggg tcctccgggg ctccggtcct
      781 ttttcatgcc gatgtgtgca gctgctaggt ttcgtccagc tccggcatgc cctcttcggg
      841 gtcgaagccg caacgccagt actcttctgg cgggagccat aatggattcc cggccccaca
      901 gttacggcac ttgagggtaa catccagcac gtcagcctca taaataggga aaatggcttc
      961 gtaagcttcc aggtaatcaa agccgcaatt attgcaggtc aattccttcg ccttcactag
     1021 ccgctctacg cattccttgc gctctcccca gcgcaacacc ctagcagatt acttccgtgt
     1081 gacctcagcg acgaacccgg tagcgcacgt gcagcacccg gtcgccctgg atgaccacgt
     1141 cggggtcctc cagcaggtgc tgt
//
LOCUS       DASQSL010000902         1470 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_7314, whole genome shotgun sequence.
ACCESSION   DASQSL010000902 DASQSL010000000
VERSION     DASQSL010000902.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1470
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7314"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(313..999)
                     /locus_tag="VE844_09250"
     CDS             complement(313..999)
                     /locus_tag="VE844_09250"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HZC01529.1"
                     /translation="MPIAPTGGGMLMQARQQDSDDAAALRVRIHRPGDEDHLLIEQVK
                     AGDHDAFDALFQRYFSTVYRQAIRLAGNREEAEEVVQEVFLTIYEKAHTFRGAAAFST
                     WLYRITANAALSKLRRRKKGEELPLDEYLPSFREDGHHLVRPVVDWSNELEERMASEE
                     RQRLIQQALDQLAPVDKAVVVLSDLEGLSDREIGSALGLSVSAVKARLHRSRLFLRGK
                     LAASLGYSPS"
BASE COUNT          274 a          468 c          414 g          314 t
ORIGIN      
        1 cggcttagcg gtggggcggg aatcctttca tcttggaccg gagaaattgt cgcactcgta
       61 tctgcacctc cggagggata tcctcataac tcagggattg cacggcctgg acagtttgct
      121 ggtaagtttt aagaaatgcc acacagtcag tgcagcggcg gagatgatcc tcgaacgtcg
      181 ctgtaacctc aggggccaac tccccgttga gataggctcg gatcagattc gtcacctgct
      241 cacaagtcaa cctggccctt ggcgcatttg cctgttgcgt cggattctgc tgtgccatca
      301 gtgcaaagct ccctacgaag gtgaatatcc cagtgaggcc gccaatttcc cgcgtaggaa
      361 cagacggctg cggtgtaggc gtgccttgac cgcggatacg ctcaggccga gagcggagcc
      421 gatttcacgg tccgagaggc cctccagatc gctcaacacg accaccgcct tatccaccgg
      481 agcgagctgg tcaagagcct gctggatgag ccgctggcgc tcttcactcg ccatgcgctc
      541 ctcaagttcg ttcgaccaat cgacgaccgg ccgcacgaga tggtgaccat cctcccggaa
      601 actcggcaga tactcgtcaa gcggcaactc ttcgcccttc ttgcgtcgtc ggagcttgct
      661 cagagcagcg ttcgccgtga tgcggtacag ccacgttgaa aacgccgccg ccccgcgaaa
      721 cgtgtgggcc ttctcataaa tcgttaagaa gacctcttgg acgacttcct cggcctcctc
      781 tcgattcccg gccagtctga tggcctgacg gtacaccgtg ctgaaatagc gctggaagag
      841 agcgtcaaag gcgtcatgat cgcccgcctt cacctgctcg atgagcaggt gatcttcatc
      901 acccggacgg tgtatcctca cccttaatgc agcggcgtca tcagagtctt gctgcctggc
      961 ttgcatcagc atccctccac ccgttggcgc aatcggcatc gccgcctcgc agattgccta
     1021 gacaatacca agcgtaagca gcccctgtca aggcgtatcg gctctcaatc ccctcgttgt
     1081 cgtcatccgg cggccgcccc tttgccacag atggttcgca gtcgagatgg tcctggctgg
     1141 gcggcggcgc cttccgatca tactacgacc tggcattctg ggttgagtgt ccctttgtaa
     1201 cggcgctgat ccgggctctg cggcgagggc cggaagggct ccctctgggt gagaccatac
     1261 gcgcctgcca aactatggga ccgctctaga gagctatcag ttgggctccg acttccccac
     1321 catgactggc agatcacccg cgcgcgatgg ggtctcgtca cgcctctgcg tggtgcagtc
     1381 gacacccccg cggcggcttg agatctttgc gcccgatgcc gaaatactgg aggaactctt
     1441 cgcccttctt gcgtcgtcgg agcttgctca
//
LOCUS       DASQSL010000903         2401 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_87554, whole genome shotgun sequence.
ACCESSION   DASQSL010000903 DASQSL010000000
VERSION     DASQSL010000903.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2401)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2401)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2401
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87554"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(41..1015)
                     /gene="cysB"
                     /locus_tag="VE844_09255"
     CDS             complement(41..1015)
                     /gene="cysB"
                     /locus_tag="VE844_09255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020209628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator CysB"
                     /protein_id="HZC01530.1"
                     /translation="MKLQQLRYLWEVSRHNLNVSATAESLYTSQPGISKQIRLLEEEL
                     NLQIFSRSGKHLTGITPAGSAIIEVVEQILAEVENIRRIAQEYRNDACGSITIATTHT
                     QARYALPPVIKSFISKYPQVALHMHQGTPMQISELAAHRKVDFAIATEALELFSDLIM
                     LPCYRWNRSIIVPCGHPLTRESPLTLEAVADYPIVTYVFGFTGRSQLDQAFAERGLKP
                     RVVLTAVDADVIKTYVKLGLGVGIIAHMAYDPAIDSGLCALDAGHLFEASITKIGFHK
                     GMFLRGYMYDFIELFAPHLIRSLVEQAAHASSREEVDALLGPISLPAR"
     gene            1129..1665
                     /locus_tag="VE844_09260"
     CDS             1129..1665
                     /locus_tag="VE844_09260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004371367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2062 domain-containing protein"
                     /protein_id="HZC01531.1"
                     /translation="MFQRYLPKQQYLREHRHLRFFGPYLRQASLWHLNRRSAARGVAL
                     GLFVAFIPLPVHMLLVACLAILFRANLPISVLAVWVSNPITWAPQIIFSYKTGLWLMG
                     TPPTAPSFEPSIEGVAELLSHSWQPFLLGCLVLGAASAVLGHMMIQGLWRWFFIRKWR
                     KRRCKRKPLARTQVEGNA"
     gene            complement(1675..>2401)
                     /locus_tag="VE844_09265"
     CDS             complement(1675..>2401)
                     /locus_tag="VE844_09265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013028117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HZC01532.1"
                     /translation="RGVKPAIVTRRLSCLGSFYKWALKNGLTKRDPIYLADKPKRPHR
                     IPIWLDKDEQKALQEAAGQTDKLPEDIFGRPREYAEGVRRRYEMLFLLILNSGLRLSE
                     ALMIRIRDVRVSAGVAKSVRVIGKGDKERLVPLPQAFGQIFGLWLSDKSKDEFVFARN
                     LEGRPPGPAAVRAYLRRLIERSGIDKRVTPHKLRHTYATRLLEAGAELVDIQTLLGHV
                     DLSATQIYTHVSEARMAEVVAKL"
BASE COUNT          519 a          666 c          659 g          557 t
ORIGIN      
        1 atgagcggtc ggttggattt caatagctta tcggcgacca ttaccgcgca gggagtgaaa
       61 tagggccgag cagagcgtct acttcttccc ttgagctcgc gtgcgccgcc tgctcaacca
      121 gggaacggat cagatgaggc gcaaagagct cgatgaaatc atacatgtaa ccccgcagaa
      181 acatcccctt gtgaaagccg atcttggtga tgctggcctc aaacaggtgg cccgcatcca
      241 gggcgcacaa tcccgaatca atagcgggat cgtaggccat atgggcaatg atcccaaccc
      301 caaggcccag tttgacatag gtcttgatca catccgcatc cacggctgta agcaccaccc
      361 gcggcttaag accgcgctcg gcgaaggcct gatccaattg cgatcgaccg gtaaatccga
      421 atacataggt cacgatcgga tagtcggcca ccgcctccag ggtgaggggg gattctctgg
      481 tcaaggggtg accgcagggg acaatgatgc tgcgattcca gcggtagcaa ggcagcatga
      541 tcagatcgct gaagagttcg agggcttcgg ttgcaatggc aaagtcgacc ttgcgatgtg
      601 cggcgagctc ggagatctgc ataggtgttc cctgatgcat gtgcagagcg acctgggggt
      661 atttgcttat gaacgatttg atcaccggcg gtaacgcata ccgtgcctgg gtgtgagtgg
      721 tcgcaatcgt tatgctgcca caggcgtcat tcctatattc ctgggcgatc cgccgaatat
      781 tctcgacctc cgccaggatc tgctctacaa cctcgataat ggccgagccg gccggtgtga
      841 tcccggtcaa atgcttgccg ctgcgtgaga agatctgcag attgagttct tcctcgagca
      901 accggatctg cttgctgatc cccggttgag aggtataaag actctctgcc gtggccgata
      961 cattgaggtt atggcggctg acttcccaca agtaacgcaa ttgctgcagt ttcatttctc
     1021 ctttaccggg cttgaggcgt aattgcaatt gtatagtaag ataactcgcc aaatagtcta
     1081 ctgttcaaca aaaacccatc ggcccgagta agcatggatc taaaagcgtt gttccaacgg
     1141 tatttgccga agcagcagta ccttcgagag caccggcatc tgcggttttt tggcccctat
     1201 ctccgccagg cgagtttgtg gcatctaaat cgccgttcgg cggcgcgagg agtggccctt
     1261 gggttgtttg tggccttcat tccactgccc gttcacatgc tgctcgtcgc ctgtctggcg
     1321 attctgtttc gggctaatct gcccatctcc gtgctggcag tttgggtaag caatcctatt
     1381 acctgggccc cgcaaattat cttctcctat aaaacgggcc tatggttaat ggggacacca
     1441 ccaaccgccc cctcttttga gccctccata gagggggtcg ccgagctcct gagccacagc
     1501 tggcagcctt ttttactggg ctgtctggtg cttggggctg ccagcgccgt actcggtcat
     1561 atgatgatcc agggattatg gcggtggttt ttcataagaa aatggagaaa acggcggtgc
     1621 aagcgcaagc ccctggctcg cactcaggtg gagggtaatg cttaatgggg atatttataa
     1681 ttttgccacc acctccgcca tccgtgcttc actgacatgg gtgtagatct gggtggcgga
     1741 tagatcgaca tgccccaaca gggtttggat atcgacaagc tcggcaccgg cctcgagcaa
     1801 acgcgtcgcg taggtatggc gaagcttatg cggtgtcacc cgtttatcga tacccgatcg
     1861 ctcaatcagc cgccgcagat aggcccgtac cgccgccgga cccggaggtc tgccctcaag
     1921 atttctggca aatacaaact cgtctttgga tttgtcactt aaccacaggc caaagatctg
     1981 cccgaaggct tgtggtaaag ggaccaaccg ctctttgtcg cctttaccga taacccgcac
     2041 cgacttggcc acacccgccg acacccgaac gtcgcggatc cggatcatga gcgcctcgga
     2101 aagccttaaa ccgctgttga ggatcagcag aaacagcatc tcatagcggc ggcgaacgcc
     2161 ctctgcgtac tcacgaggac ggccaaagat atcttcgggc agcttatccg tttgcccggc
     2221 cgcttcttga agtgcctttt gttcatcttt atccagccat atggggatgc ggtgaggtcg
     2281 tttgggctta tcggccagat agatcggatc gcgctttgtc aagccatttt taagcgccca
     2341 cttgtagaaa ctgcccaaac aacttaggcg ccgggtcaca atagcaggct tgacgcctct
     2401 c
//
LOCUS       DASQSL010000904         2423 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_144349, whole genome shotgun sequence.
ACCESSION   DASQSL010000904 DASQSL010000000
VERSION     DASQSL010000904.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2423
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144349"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..189)
                     /locus_tag="VE844_09270"
     CDS             complement(<1..189)
                     /locus_tag="VE844_09270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01533.1"
                     /translation="MTTIITGAHLPHEKGGDSQAFLASRSGFVVAQVGNFRSLILRKV
                     RPLLTKQASYGYVVAQGRR"
     gene            complement(186..986)
                     /gene="istB"
                     /locus_tag="VE844_09275"
     CDS             complement(186..986)
                     /gene="istB"
                     /locus_tag="VE844_09275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019537643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HZC01534.1"
                     /translation="MAKPTGADQLRETLQSLKLDCMADTVEALCEQAAKETWTYATFL
                     THLLSEELAAREHRRLTVTTKMARLPFHKTLAQFDFAFQPSVDKRRIQELASLRFVAS
                     GSNVLFLGPPGVGKTHLAIALGLKALEAGLSTYFVSVPELIDQISQDAQRGQLLKRMQ
                     QLYKPRVLILDEMGYLPLERPIATFLFQLVAKRYEKGAIILSSNKSFSEWGDLFTDQV
                     LATALLDRLLHHSTLINIRGQSYRLKDKRQAGVFHTPETLEATSPAAG"
     gene            complement(986..2239)
                     /gene="istA"
                     /locus_tag="VE844_09280"
     CDS             complement(986..2239)
                     /gene="istA"
                     /locus_tag="VE844_09280"
                     /inference="COORDINATES: protein motif:HMM:NF033546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HZC01535.1"
                     /translation="MINVEEWFMIRDLARQGLSMTDIAYRMGCDRKTVRKYLAYPDQP
                     RYPPRAPQASKLDPFKSYVQQRLDQGVFNCEVLYQELCQHGYDGKPTILRDYVRPRRQ
                     AARQQACVRFETPPGQQGQVDWGSFGTLWHEGRQRRLYCFALTLGYSRALYAEFTVSS
                     GMMAFLRCHINAFSELGGVPEHLLHDHQKTVVHSHDPGGAHLWNARYLDFADRYGFVP
                     RLCRPYRAQTKGKVESGIKYIRRNFWPSCPDVTGLDALNEALRYWLAEVANVRLHGTT
                     HEMPRVRLTRESLRPMSVLPYDLSMVSMRCSSKDGFISYSGNRYSVPSGHALSPLTVR
                     ETPEGRLEIYAGLECVARHDLASGRHQSIVDPAHFEALWQAFKERSDPDQILLAGPRL
                     GREVSEPQVEVRSLDLYEALARGDA"
BASE COUNT          522 a          682 c          710 g          509 t
ORIGIN      
        1 acggcgcccc tgggcaacca catagccata gctggcttgc tttgtcaata gcggtcgaac
       61 tttcctcaaa attagcgaac gaaaattccc cacttgagca acgacaaagc cagagcgtga
      121 agcgagaaaa gcctgtgagt cacctccttt ttcatgtggc agatgagcgc ccgtgatgat
      181 cgtggtcacc ccgccgctgg cgacgtcgct tccagcgtct caggggtgtg aaagacccct
      241 gcttgccgct tgtccttgag ccgatagctc tgaccccgga tattgatcag ggtggaatga
      301 tgcagcagcc ggtccagcag ggcggtggcg agcacctggt ctgtaaagag gtcgccccac
      361 tcgctgaagg acttgttgct gcttagaatg atggcgcctt tttcatagcg cttagccacc
      421 aactggaaca gaaaggtggc gatggggcgc tctagaggta aataccccat ctcatccaaa
      481 attaagaccc tcggtttgta cagctgctgc atgcgtttga gcagctggcc gcgttgggca
      541 tcctggctga tctgatcgat gagttcaggc acactgacaa aataggtgct cagcccagcc
      601 tcgagcgcct tgagacctaa ggcaatggcc aaatgggtct ttcccacgcc tggaggtccc
      661 agaaacaaga cgttggagcc gctcgccaca aagcgcaggc tggccagctc ttggatgcgc
      721 cgcttgtcca cactgggctg gaaggcaaaa tcaaactgcg ccagcgtctt gtgaaagggc
      781 aagcgcgcca ttttggttgt gaccgtgagt cgtctgtgtt cgcgcgccgc cagttcctca
      841 ctcagtaagt gcgttaagaa ggtggcatag gtccacgttt cttttgccgc ttgctcgcac
      901 agcgcctcga ccgtgtcagc catgcagtcg agtttcaagc tctgcagggt ctctcggagc
      961 tgatccgccc ccgttggctt ggccattagg catctcctct ggcaagcgct tcgtagaggt
     1021 ccaaggaacg tacctcgact tgcggttcgc tgacctcgcg tcctaagcgc ggacctgcca
     1081 gcagaatctg atccgggtcc gaacgttcct tgaaggcttg ccacagcgcc tcaaagtggg
     1141 ccgggtcgac gatgctttga tgccggccgc tggcgaggtc atgacgcgcc acgcactcga
     1201 gacccgcata gatttctaag cgaccctcag gggtttcgcg caccgtcagt gggcttaagg
     1261 cgtgaccgga tggcaccgag tagcgattgc cactgtaact gataaagccg tctttgctgc
     1321 tgcaacgcat cgataccatc gacagatcgt aaggcaacac gctcatcggg cgtagggatt
     1381 ctcgagtcag acgaaccctg ggcatttcat gcgtcgtgcc atgaaggcgc acattggcca
     1441 cctcggcaag ccagtagcgc agcgcctcat tgagagcgtc gagcccggtc acatcggggc
     1501 acgacggcca gaagttgcgc cggatatatt taatgccgct ttccaccttg cccttggtct
     1561 gggcccggta gggccggcat aagcgcggca caaaaccata acggtcggca aaatcgagat
     1621 aacgtgcgtt ccacagatgg gcaccacccg ggtcgtggct gtggaccacg gttttttgat
     1681 ggtcatggag caggtgctcg ggcacaccgc cgagctcgct gaaggcgttg atatgacaac
     1741 gtaaaaacgc catcatgcca cttgaaacgg tgaactcggc atagagcgcc cgcgaatagc
     1801 ccagcgtcag ggcaaagcag taaaggcgcc gctggcgacc ctcgtgccaa agggtaccga
     1861 atgagcccca gtccacctga ccttgctgac ccggcggcgt ttcaaaacgc acacaggctt
     1921 gctggcgagc cgcctggcga cggggacgca catagtcacg caggatggtg ggcttgccgt
     1981 cgtaaccgtg ctggcataat tcttggtaga ggacttcaca gttaaagaca ccctgatcga
     2041 gacgctgttg cacgtaggac ttgaacggat cgagtttgct cgcttggggc gctcgaggcg
     2101 ggtaacgcgg ttgatcggga taggccaggt acttacggac cgtcttgcgg tcacacccca
     2161 tgcggtaggc gatatccgtc atgctgaggc cttgacgggc caagtcgcga atcatgaacc
     2221 attcctccac attgatcatg aacgatctcc tagtgggact cagtgtgtca ccctcctaag
     2281 agatccaatc cttcaacgtg gggaattttc aaccgttatt attggggaat atacaaccgt
     2341 tattaacatt aacaagctaa gtcggtgatg gctttggcat agagctgctg ggtgccgggg
     2401 gaaaggcggt ggagttgcat ctg
//
LOCUS       DASQSL010000905         1088 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_21491, whole genome shotgun sequence.
ACCESSION   DASQSL010000905 DASQSL010000000
VERSION     DASQSL010000905.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21491"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            105..>1088
                     /locus_tag="VE844_09285"
     CDS             105..>1088
                     /locus_tag="VE844_09285"
                     /inference="COORDINATES: protein motif:HMM:NF040570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-guided endonuclease TnpB family protein"
                     /protein_id="HZC01536.1"
                     /translation="MVSKGYKFRFYPNSAQKKQLAQDFGCARHVWNHALERRTRAYQE
                     HGERLTGVDISREITSLKRRERPWLGEASSTVLTQVLRDQDHAFQNFFEGRAKYPRFK
                     KKHAAQSVRYQLDQREVHRTFSACDHRLVLPKLGALKLRWSREVEGVPKMVTVRRDAC
                     GRYFVSFSCEVEVKPLAPKTDLVGIDFGIKDVVVTSAGHKSGNPRHIKKRERYLKWAQ
                     RRLVRKRKGSNRYRWQRFRVARLHARVADARQDFLHKTSCELVSENQALAIQPHNVQG
                     MLANHKLARAMSDVGLGELTRQIRYKACWYGRQVFELDPWQRTTGVCPDCGH"
BASE COUNT          249 a          298 c          322 g          219 t
ORIGIN      
        1 tgacgcagtg gttttgatat atatgagatc gtgtaacata ttgaataact gcacaatcca
       61 aaagacacaa cctgtcaaaa tcattgcgtc agaccactag ctccgtggtt agcaagggat
      121 ataaattccg cttttatcca aattccgcgc agaagaagca gcttgcgcag gacttcggct
      181 gtgcacggca tgtctggaat catgcgcttg agcgccgcac tagggcatac caggagcacg
      241 gtgagcgcct tacaggtgtt gatatctccc gcgagattac gtctctcaag agacgcgagc
      301 gcccttggct cggtgaggcc agcagcaccg ttttgaccca agtgctgcgt gaccaggacc
      361 atgcctttca gaacttcttt gagggccgcg ccaagtatcc caggtttaaa aagaagcacg
      421 cggcgcaatc ggtgcgctat cagcttgacc agcgagaggt gcaccggacg ttctctgcct
      481 gcgaccatcg gctggtgctg cccaagctcg gggcactcaa gctgcgctgg agccgtgagg
      541 ttgaaggcgt acccaagatg gtaacggtca ggcgcgacgc ctgtggccgc tactttgtca
      601 gcttctcctg cgaggtcgaa gtcaagcccc tggctcccaa gaccgacctt gtcggcatcg
      661 acttcggtat caaggatgtg gtcgtgacct cggctggcca caagtctggc aacccgcgcc
      721 atataaagaa gcgggaaagg tatctcaagt gggcgcagcg gcgcttggtc agaaagcgga
      781 aaggatccaa tcgatataga tggcaacggt ttcgggtggc tcgcctgcac gcccgcgtcg
      841 ccgacgcacg ccaagatttc ctgcacaaaa cgagttgtga gctggttagc gagaaccaag
      901 cgctggcgat acaaccgcac aacgtgcagg ggatgcttgc taaccacaaa cttgcgcgtg
      961 cgatgagcga tgtaggcttg ggcgagctta cccgccaaat ccgatacaag gcgtgctggt
     1021 atggccgcca agtgtttgag ctcgatccct ggcagcgcac gacgggggta tgcccggatt
     1081 gcgggcat
//
LOCUS       DASQSL010000906         1514 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_31959, whole genome shotgun sequence.
ACCESSION   DASQSL010000906 DASQSL010000000
VERSION     DASQSL010000906.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1514)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1514)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1514
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31959"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            223..468
                     /locus_tag="VE844_09290"
     CDS             223..468
                     /locus_tag="VE844_09290"
                     /inference="COORDINATES: protein motif:HMM:NF024908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC01537.1"
                     /translation="MVTITNTTITRDEVWHAFRRTPDVRLRERYHCILLLMDGRSCPE
                     IAQWLYRDEDTVRGWVHAFNHEGLQGLEREPIPGRPA"
     gene            487..1284
                     /locus_tag="VE844_09295"
                     /pseudo
     CDS             487..1284
                     /locus_tag="VE844_09295"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
BASE COUNT          316 a          446 c          461 g          291 t
ORIGIN      
        1 cccgcccgtc gcgcccgcca acgcgacgac gcggccatga tccgctggcg cgaagacacc
       61 tggcccgccc tcaaaagggg gcggaagccc aggctcagac aatcctcttt gtagacgagt
      121 ccggattcta tcccttgcct acagtgatcc aacaaaataa ccccggtttt caggctctgc
      181 ggtataaggg cataaacagg atgaatccgg agggcctgaa cgatggtgac gattaccaat
      241 accacgatca cacgcgatga ggtctggcat gcctttcgtc ggacacccga tgtccggctc
      301 cgcgagcggt accactgcat tctgctgctg atggatggca ggagctgtcc cgagattgcc
      361 cagtggttgt accgcgacga ggacactgtg aggggttggg tccatgcctt caaccatgag
      421 ggcctccaag ggctggagcg cgagccgatc ccggggcgcc ccgcgtgact caccccggca
      481 caacggacgc aggtcaaaga ggcggtccgc cgttgtcccc gggagtgggg ctataacatg
      541 aacttgtgga cgacgaagtt ggtccgacac ttcatctaca cccgctttgg cgtcgagtac
      601 tgccgggagc gggtccgaca gctgctgcac acgctggggt ttcgcctgcg ccgcttgcgg
      661 cacggtcatc tgaaggccaa ggcggaggag caggaggtct ttatcgccga gctggaggca
      721 ttggtggcag agtggtccga ggagtgggaa ctgctctttg tcgatgaagc gaccgtgcgt
      781 cgccatccca ccctgaccgc ccagtggtgc ttggtggacg aggtgcccaa ggtgcccacc
      841 ggggatgacc ataccaaggt gcatgtctac ggcgccgtag ccccgctgac cgggcaaacc
      901 cactaccata tcagccccga gttgggccag ggggagttcg cgcaattcct ggagcacctg
      961 ttggtgtatc atccgggcaa acggctgctg gtcatccatg accggggggc acagcataaa
     1021 ggcgctcccg tagaggccat cgttagggac gccaagggac ggctcgtgct ccaggctcaa
     1081 cccgcctact cgccggaact gaatccccaa gagcgcgtct ggaggtggtt gcgtcgggtc
     1141 gtcacgcaca atcattggtt tgcgaccctc aaggaacaaa tcgaagccat ccggaatttc
     1201 ttccgttact tggctggggt gaaagatcag gtgcgacagt tgtgtggttt caaaaccccg
     1261 gattctttag ttgcatcact gtaggtcaag aaaagcccgc agtagcgatg cgctcactcg
     1321 gcgggaagtc tcggaagtct ccacccatag gaaatcctcg ataatcagga cttgatactc
     1381 gccggacagc agagttgatt ccttgaccat tagagatcta ctgacccggt cacaaaaatc
     1441 taaagttttg cgcctcgcaa gacgctgtac attagacggg gttttcgacg gacccgcttg
     1501 accgcgtcac gccg
//
LOCUS       DASQSL010000907         2091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_7350, whole genome shotgun sequence.
ACCESSION   DASQSL010000907 DASQSL010000000
VERSION     DASQSL010000907.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2091
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7350"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(232..1710)
                     /locus_tag="VE844_09300"
     CDS             complement(232..1710)
                     /locus_tag="VE844_09300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015139194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HZC01538.1"
                     /translation="MIYDRTPESNIPGPPPFPIIGRWHNMLQFGRDAVGYCGRLFDRY
                     GKVAMLVKGAKSNLYSPLNKCPGTVLAYGPEATRAASTQHEIYFKYPLSGPRYRLKDR
                     SVRTAPLKHFAVGLFGVNLEEHRQHRRLVMPAFQSKRISSYRDTMVDITESCLNDWRI
                     GEQRNILYELRLLTMRIATQTLFGKDIGEHSRRIGPLLQEAVNALAHPLIQLFPYDLA
                     GLPFHRFLTLSAEIDIEMRRIIEHKRKADHDGNDMLSSLLQARDAESGLALSEDELIG
                     HTNVFFVAGHETTANALTWTLFLLSQHPDIAADLVDELQSVLHGTAPSVEQLEELPLL
                     DQVVKESLRLFTPAPFNGRVISQPTEFCGYELPAGMEVFVSIYHTHRMPEIYPEPARF
                     HPRRWESIEPSIFEYNPFSAGPRLCIGWQFALQEMKVVLALLMQRIRLRCVPKLVINR
                     TGVIVLTPEGGLPMIIHAQDRLFQHGVGGVRGNVRDMVELPP"
BASE COUNT          452 a          574 c          602 g          463 t
ORIGIN      
        1 tggcttacgc tcctcggctt cccgccctcg agcactctgc actaacccca agggctcaac
       61 cctttcaaac cggaagcatc atcccgtcct gaaccctctc cgttcaggac cgtcctcgca
      121 catcggtgta aagcagaacc ccaggatttt aaccggtccc gaggcgctca cccaataagc
      181 ccctggcttt gccgggggta atttaactat aagcggaagt taaggatcca atcacggggg
      241 taattccacc atgtcgcgca cgttccccct cacgccgccc acgccgtgct gaaacagtcg
      301 gtcttgggca tggatgatca tcggtaatcc gccctctggc gtgagcacga taactccagt
      361 gcgattgata acgagttttg gcacgcatcg aaggcggatc cgttgcatga gcaacgcgag
      421 cacgaccttc atctcttgca gagcaaactg ccagccgatg cacagccgtg gaccggcgct
      481 gaaggggtta tattcaaaaa tcgatggctc tatgctctcc cagcgccgcg gatggaaacg
      541 ggcgggttcg ggatagatct ctggcatgcg gtgggtgtga tagatgctca cgaaaacttc
      601 catgccggct ggtagctcgt agccgcaaaa ctcagtgggc tgggagatca cgcggccatt
      661 gaacggcgct ggggtaaata ggcgcaggct ttccttgacc acctggtcga gaaggggcag
      721 ctcttcgagc tgctctacgc taggcgccgt tccgtgcagc accgattgga gttcgtccac
      781 caaatcggcc gcaatgtccg ggtgttgtga gagcaggaac aacgtccagg tgagtgcgtt
      841 ggcggtggtc tcatgtcctg cgacaaagaa gacgttggtg tgcccaatca attcgtcttc
      901 gctgagcgca agcccgctct cggcatcgcg tgcttggagg agactggaga gcatgtcgtt
      961 gccatcgtgg tcagccttgc gtttgtgctc tatgatgcgg cgcatctcta tatcgatctc
     1021 ggcactcaag gtgaggaagc gatggaaagg caagcccgcc agatcgtagg ggaatagctg
     1081 gatcaagggg tgagccaggg cgttcacggc ctcttggagc agagggccga tgcggcggct
     1141 gtgctcaccg atatcctttc cgaacaacgt ctgcgttgcg atgcgcatcg ttagcagccg
     1201 cagctcatac aaaatgttgc gctgctcgcc gatgcgccag tcgtttaggc acgactcagt
     1261 aatatcgacc atcgtgtccc gatacgagct tatgcgtttg ctctgaaagg cgggcatgac
     1321 caaccggcga tgctggcggt gttcttcgag attcacgccg aataacccta cggcaaaatg
     1381 cttgagcggc gcagtgcgta ccgagcggtc tttcaaccga tagcgcgggc cggagagcgg
     1441 atatttgaag tagatttcat gctgagtact ggccgcgcgc gtggcttctg gcccatacgc
     1501 gagcaccgta ccggggcact tgttgagcgg agagtagaga ttagacttgg ctcccttcac
     1561 gagcatggcc accttaccat agcgatcgaa caaccgtccg caatacccaa cggcgtcacg
     1621 accaaattgc agcatgttgt gccatcgacc aataatggga aagggtgggg gacccgggat
     1681 gttcgattct ggtgtacggt cgtaaatcaa gggagactcc tcggttagtg tatcagttgc
     1741 ttaggcgcca acaggggata ttcaacttgc caagatagcg gcccctagca gatccggctc
     1801 tggtgcggta actcgggtta gcagaagatc gacgtcatga gctacgccaa ccctctcttc
     1861 aaacgccgcc acttcgaccg tctcattata gttctccgtg gcaggtagat tgaaccgtgt
     1921 agccggcttc ccctactttg cccctggtga caagaatgtt tttgtggcgc ctaacccgac
     1981 ttccgcaact caagcgagat tttgatgaaa ttaaggatgt ttggctttct aactatatga
     2041 tttagatgtg aagcgatttt gtagctacgc tgaaaacggc gtgtagtgcc g
//
LOCUS       DASQSL010000908         1624 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_158023, whole genome shotgun sequence.
ACCESSION   DASQSL010000908 DASQSL010000000
VERSION     DASQSL010000908.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158023"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1624)
                     /locus_tag="VE844_09305"
     CDS             complement(<1..>1624)
                     /locus_tag="VE844_09305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01539.1"
                     /translation="YSSTMTIRVKHIIGDTIEFFFNPQEDDLRVGENLWVGETHRQRG
                     VIVQIIEFRTLPTPPLWQELPYLTLAHRSTTESPFSGQEALRASHAGNMAHVAIAKIR
                     RRTDPGWRQWDGWIPGPDAVATRMTDEEVLRQCVPISGNPLRLGRTLAGEPFSIEGST
                     LGQVNIIAEGKDARALQLAAVMLRELMNRGAPCVVFDSTGELSQLSRRELHVAPRKAS
                     LPQVIHLQVGRNLRLDPQQMGTGPLLTLLTGFGLPRLLAMSYAGDPARVIEPLRHLEE
                     TSQQSALPTFDNLTPRTPEFKSAEHEMIYGAFLSCLQAVQGTGLLASHASEAASLGES
                     YEKIRHGGALMIDISGLPNRARPGAVQACIEIIQGLETALPHEVQRFPLLFFEKAHLY
                     LDSNMLGDLVGRGRPLGMTMMVLTDMVDSLDDTILRQAENLFILGSISDEAVQRLGKI
                     GLTDRESLHSLVQRLQGQQSLLVGAATKQYPLIFEVETIEGGDELVAPRRYFRPRRLH
                     DSPSSLPPAKDTTLPLFPEEEPALADPFAPSPP"
BASE COUNT          367 a          442 c          489 g          326 t
ORIGIN      
        1 gggggggtga aggggcaaag ggatccgcga gcgcaggttc ctcttcgggg aaaagaggta
       61 acgtcgtgtc cttcgctggc ggcagggaag aaggagagtc gtggaggcga cggggacgaa
      121 aatagcgtcg tggcgccacg agttcatcac ctccctcaat ggtctcaacc tcgaaaataa
      181 gcggatattg tttggtggcc gcgcccacca acaagctttg ttgaccctgc aatcgctgca
      241 caagcgagtg cagcgattcg cgatcggtca gaccgatctt gcccagacgc tgcacggcct
      301 catctgatat ggaacccaaa atgaaaagat tctccgcctg gcgcagtatg gtgtcgtcaa
      361 ggctgtcgac catgtctgtg aggaccatca tcgtcattcc caatggcctg ccgcggccca
      421 caaggtcgcc gagcatattg ctgtcgaggt aaaggtgagc tttctcgaag aacaacaagg
      481 gaaagcgttg tacttcgtgc ggtaatgcgg tctcaaggcc ttggatgatc tcgatgcagg
      541 cctgaacggc accggggcga gcacgattgg gcagcccgga gatatcgatc attaaagctc
      601 cgccatggcg aattttctcg taagactccc ccagagatgc cgcctcagag gcgtggctag
      661 ccaggagccc ggtcccttgc accgcttgca gacagcttaa gaaggcacca tagatcattt
      721 cgtgctcagc cgatttgaac tcaggggtcc tcggagtgag attatcaaag gtgggcaatg
      781 ctgactgctg agaggtttcc tccaggtgcc tcagaggctc gatgacacgt gccgggtcac
      841 cggcataaga catggccagt aaccgtggca agccaaagcc tgtcagcaac gtgagcaggg
      901 ggccagtccc catctgctga gggtcgagtc tgagattccg cccaacctgc agatggatca
      961 cttgaggaag agatgctttc cgaggagcaa catggagctc gcgacgggaa agctgcgaaa
     1021 gttcaccagt gctatcgaaa acgacacatg gagcgccgcg attcatcaac tcgcgtagca
     1081 tgacggccgc aagctgcagc gcgcgtgcat ctttgccctc agcgatgata ttcacctgcc
     1141 cgagcgtgct gccctcgata gaaaatggct cgccagcaag ggtcctcccg agtctgaggg
     1201 gattccccga aattggcaca cactgccgta gcacttcctc gtcagtcatc ctggttgcga
     1261 cggcatctgg tccgggaatc caaccatccc actggcgcca gccagggtca gtgcggcgac
     1321 gaatcttagc gatcgccaca tgggccatgt tgcctgcatg gctggcccgc aaagcttctt
     1381 ggccgctgaa aggggattcc gttgtggatc tatgggcgag ggtgagatac ggcaattcct
     1441 gccagagggg tggtgtggga agtgtgcgaa actcgatgat ctggacgatg acaccacgtt
     1501 gtcgatgagt ctcgccaacc caaaggttct ccccgactcg cagatcgtcc tcttgcggat
     1561 tgaagaagaa ctctatggtg tcgcctataa tatgcttgac ccgaatggtc atcgtcgagg
     1621 agta
//
LOCUS       DASQSL010000909         3536 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_113181, whole genome shotgun sequence.
ACCESSION   DASQSL010000909 DASQSL010000000
VERSION     DASQSL010000909.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3536
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113181"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..194)
                     /locus_tag="VE844_09310"
     CDS             complement(<1..194)
                     /locus_tag="VE844_09310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01540.1"
                     /translation="MGLQFGIVGGEKTSGRQRFEGLRELLRTLQNGIVLTPKRTGFEQ
                     AIEIIIQTDHLLAQPGEMVF"
     gene            232..1554
                     /locus_tag="VE844_09315"
     CDS             232..1554
                     /locus_tag="VE844_09315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006421126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01541.1"
                     /translation="MAIVAPKVHKTLSADALFALIHKAFSSLGDHRSGTPDISLADAL
                     MSAFAMFSLKAPSLLAFDKERAEGNLHHIYGIEHTPCDTSMREILDPIEPDALRPVFK
                     QVFRQLKRSKVLQEMEFVQGHYLLALDGTGYFCSNQIHCASCLETRHRNGTLTYAHHM
                     LGAALIHPDKRQVIALMPESIIKQDGTDKNDCERNAAKRFLTKFRQDYPDLKVIVTED
                     SLSSNAPHIETLQDHDVHYLLGVKEGDHAFLFDQIARAEQAGRVTYYERDDAKKGVQH
                     RFRFVSDMPLNASNAALRVNFLECWETAKGKTQHFTWVTDLRLNKGTVYRLMQGARAR
                     WRIENETFNTLKNQGYHFEHNFGHGYQHLSVVFAVLMMLAFFVDQVQQLCCPLFQAAW
                     AKWGSKRLLWEKMRALFYDYALDSMEHLFQALYYGLKKSAPILDIDSS"
     gene            complement(1946..3331)
                     /locus_tag="VE844_09320"
     CDS             complement(1946..3331)
                     /locus_tag="VE844_09320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01542.1"
                     /translation="MKAGSHSMPAVHCEASATLHLVQIEVSPAHPLLGLKRALPWEVI
                     TDVMTRQWRQNGKNVDGGRGLPWDVSLYVPLVVLMLIKGFDSRQMEAYVAENVVARVF
                     IGRQREVKAQIRDHSNIARAYAALGKAGIDEVNRLVVQEAHRFGFVDEGSLSADTTAQ
                     ELPIGYPNEPGILRGLAQRCGRALTQLQKRGVQRLGGALRQVQTILRSVKEHHLFTSG
                     KADKRQVLSRIMREVGDLMVQTRPLVERLATRSERVIQRARSRLMAMHEVIKPLIGQI
                     VHWLTTGKVAANKIIPVGIPQARAIVHNKAGKKTEFGLAYLLSRLGGGYLFGERITAN
                     ADERQMPLKALARYRAIFGQEATPEFMVYDRGGDSTATRQRLASEGVKDVGIQPKGKR
                     PWSVAEAVREQIRSEGGRTEGCIGTLTSNRYRFNKPKERLWQTLEMAGPRSILSFNLN
                     KLMRDVVALVQ"
BASE COUNT          736 a         1091 c          925 g          784 t
ORIGIN      
        1 ttgaatacca tctcacctgg ttgcgccagc aagtggtcag tttggatgat gatctcgata
       61 gcctgctcaa agcctgttcg ctttggcgtg agtacgatgc cattttgcaa agtacgcagc
      121 aattcccgga ggccctcaaa ccgctgtctt ccgcttgtct tttcgccgcc cactatgcca
      181 aactgcagcc ccataccact cggttcagct ctttttccat cgggggtttc tatggcaatc
      241 gtggcgccca aggtccacaa gactctgtct gccgatgccc tgttcgcctt gatccacaag
      301 gccttttcca gtcttggcga tcatcgctcg ggtacgcccg atatctccct ggctgacgcc
      361 ctgatgtcgg cctttgccat gttctccctg aaagcgccgt cacttttggc ctttgacaaa
      421 gagcgagccg aaggcaatct gcaccatatc tacggcatcg agcacacacc ctgcgatacc
      481 tcgatgcgcg aaatcctcga tcccatagag cccgacgctc tccgtcccgt tttcaagcag
      541 gtgttcaggc agctaaagcg cagcaaggtc ctccaagaga tggaatttgt gcaaggtcac
      601 tacctgttgg cgctcgatgg cacgggctac ttttgctcca accagattca ctgtgcgtcg
      661 tgcttggaaa cccgtcaccg aaacggcacg ctcacctatg cccatcacat gctgggagca
      721 gcactcatcc atcccgacaa gcgccaagtc attgcgctta tgcccgaatc catcatcaaa
      781 caagacggca ccgacaaaaa cgactgcgag cgtaatgccg ccaaacggtt cctcaccaag
      841 ttccgtcagg attatcccga tctcaaggtg attgtcaccg aggatagcct cagctccaac
      901 gcccctcaca ttgagacgtt gcaagaccat gacgtccact acctgttggg cgtcaaagaa
      961 ggcgatcacg cctttttgtt tgaccagata gcccgggctg aacaagcggg tcgtgtcacc
     1021 tattatgagc gtgacgacgc caaaaagggc gtccagcatc gctttcgctt tgtcagcgat
     1081 atgccgctca acgcttccaa tgccgcgctg cgcgtcaact ttctcgaatg ctgggaaacg
     1141 gccaagggca aaacccaaca cttcacctgg gtcactgacc tgcgtctcaa caagggcacg
     1201 gtttaccgcc tcatgcaggg agcccgagcc cggtggcgta tcgaaaacga gacgttcaat
     1261 acgctgaaaa accagggtta ccacttcgag cacaacttcg gccacggcta ccagcatctc
     1321 tccgtggtgt ttgccgtgct gatgatgctg gcgtttttcg tcgatcaggt ccaacagctg
     1381 tgttgtcccc tgttccaggc ggcctgggcc aagtggggca gtaaacgtct gttgtgggag
     1441 aagatgcgtg cgctgtttta cgattatgcc ctggactcca tggagcacct gttccaggct
     1501 ctgtactacg gcttaaagaa gtctgccccc atcctggaca tcgattcctc ctaatcaata
     1561 ttccgccctc tcagaccacc cggatgcgcc gatccaaacc gtcgagagtc gacgatctgg
     1621 gcggagctgt atctcaaggg cggccagatg cggcatggat gcgggtcggg catcccgcct
     1681 ggtgcatgtg gggctgcaaa atcgacagac gggttcgtca aatgggccag cgagacacgt
     1741 cgagacacgt ttcgacatca ctcgtatagg acaaaccggc cggagcggga atggctgatg
     1801 aagaaacata tcgcataaat gaactgcggc atatttagta tgtgtcgcag aattccttag
     1861 gaggtcatcg aggcctccac gccttctggt ttctccgttc tctccttttt gtttccgctt
     1921 tgatcggagc tgctttgccg ctcttttact ggacgagggc tacgacatcc cgcataagtt
     1981 tgttcagatt gaatgacaag atcgaccttg ggcccgccat ctccagcgtc tgccagagcc
     2041 gttctttggg tttgttgaat cggtaccggt tgcttgtgag tgtgccaatg cacccttcgg
     2101 tgcgaccccc ttcgctgcgt atctgctccc ggactgcctc ggctaccgac cagggccgct
     2161 tgcctttggg ctgaatcccc acatccttga cgccctcgga ggcgagacgc tggcgggttg
     2221 cggtcgaatc gccaccccgg tcgtagacca tgaattccgg tgtcgcctcc tggccaaaga
     2281 tggcccggta tcgtgccagg gctttgagcg gcatttgcct ttcgtccgca ttggccgtga
     2341 tacgttcgcc aaagagataa ccaccgccca ggcggctgag cagataagcc aaaccaaact
     2401 ccgtcttttt gcccgccttg ttgtgcacaa tggcgcgggc ttgcgggatg cccacaggga
     2461 tgattttgtt ggccgctacc ttgcctgtcg tgagccagtg tacgatctga cctatcagtg
     2521 gcttgatcac ctcgtgcatc gccatcaggc gtgagcgggc acgctgaatc acccgctccg
     2581 agcgcgtggc cagacgctcg accagcgggc gcgtttgcac catgaggtcg ccaacctcgc
     2641 gcatgatccg gctcaacacc tgacgtttgt ccgctttgcc cgaggtaaac agatgatgtt
     2701 ctttgaccga gcgcaagatc gtctgcacct gcctcagggc gcccccgagt ctctgaacac
     2761 ctcgcttttg caactgtgtc aaggcgcggc cacagcgttg cgccagcccc cgcaaaatac
     2821 cgggttcgtt ggggtagcca atggggagtt cctgtgccgt ggtatcggcc gacaaactcc
     2881 cttcgtcgac aaagccaaag cggtgcgcct cttggaccac caagcggttg acctcgtcga
     2941 tacccgcctt gcccaaagcc gcataggccc gggcaatatt ggagtgatcg cgaatctgcg
     3001 ccttgacctc tcgctgacga ccaatgaaca cgcgcgccac cacgttctcg gccacatacg
     3061 cctccatctg acgcgaatcg aagcccttga tcagcatcag caccaccaac gggacatata
     3121 acgatacatc ccagggcaag ccccgcccac catcgacatt tttgccgttt tgacgccact
     3181 gccgcgtcat tacgtcggtg atcacctccc acggcaacgc ccgcttgagc ccaagcagcg
     3241 gatgagcggg cgacacttcg atctgaacga ggtgaagcgt tgcacttgcc tcgcaatgaa
     3301 ccgcgggcat agaatgggaa ccagctttca tagcgatctc ctggttgtgt gcttactctc
     3361 ataaaaccag agatacgcca aagccgcctg aggaagcaag tccgatgtgg catttcgccc
     3421 tcggacggcc cctcaggtgt ttgatgcaaa agcctattac gcgacacgct ctatctatcc
     3481 cagacgggat tggatgtcct gaagggggct gaccgcatca aaaaagctcc agagac
//
LOCUS       DASQSL010000910         1084 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_128659, whole genome shotgun sequence.
ACCESSION   DASQSL010000910 DASQSL010000000
VERSION     DASQSL010000910.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128659"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(56..>1084)
                     /locus_tag="VE844_09325"
     CDS             complement(56..>1084)
                     /locus_tag="VE844_09325"
                     /inference="COORDINATES: protein motif:HMM:NF033559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC01543.1"
                     /translation="QIVVGCLTDAHGRPVSIELFAGNTQDPKTFKSQVDKLHERFGVR
                     HVTLVGDRGMIKSAQIEDLKEVGFYYITAITKPQIEALIKQGVFQHDLFDEQVMEIEQ
                     EEVRYVLRRNPVRAKELAEGREEKWHALKRFVDEQNRYWAEHPKAKPQTAWKKVTAKA
                     GKLKVDAWVVLEQPERAITTHLDEEKKQTLARLDGCYVIKSDLPKTAADKQTVHDRYK
                     DLTQVEHAFRTMKTTLLEMRGVYVRKTNRTRAPIFIIMLAYLLAYELQQRWRDLNVTV
                     EEGIQELASICTVELTLVGQARCQVIPDPRPLGQQLLECLNITLPDAIPHRGITVATR
                     KDLTARRK"
BASE COUNT          201 a          296 c          325 g          262 t
ORIGIN      
        1 cggatgttcc acccgcagag acctcttgaa ctgaggtaag tcgttgagaa atgggttatt
       61 ttctcctagc ggtgaggtct ttgcgcgtgg ctacagtgat gcctcggtgg ggaatggcat
      121 cggggagggt gatatttaag cattcgagga gctgctggcc gaggggccgg ggatcaggga
      181 tgacctgaca gcgggcttgg ccgaccagag tgagctcgac ggtacaaatg gaggccagct
      241 cctgaatccc ttcttcgaca gtgacattaa ggtcacgcca gcgctgctgg agctcataag
      301 ccagcaaata ggccagcatg atgataaaga taggggcacg ggtgcgattg gtcttgcgaa
      361 cgtaaacacc ccgcatctca agcaaggtgg tcttcatggt ccgaaaggcg tgttcgacct
      421 gggtgaggtc tttgtagcgg tcatgcacgg tctgtttgtc cgcggccgtt ttgggcaaat
      481 cgctcttgat gacatagcag ccgtccaggc gtgcgagggt ctgctttttc tcttcatcga
      541 ggtgggtggt aatcgcccgc tcaggttgtt ctaaaaccac ccaggcatcg actttgagct
      601 tccctgcttt ggccgtcacc ttcttccagg cggtttgagg cttggctttg gggtgttcgg
      661 cccagtagcg attctgctca tcgacgaatc ttttcagggc gtgccatttc tcctcgcggc
      721 cttcggccag ttctttggcc cgcaccgggt tacgccgcag cacgtaacgt acctcctcct
      781 gctcgatctc catgacctgc tcatcgaaca agtcgtgctg aaagactcct tgcttgatca
      841 gcgcctcgat ttggggcttg gtgatcgcag taatgtaata gaagccgacc tccttcagat
      901 cctcgatctg agcgctcttg atcatgcccc ggtcgccgac cagcgtgacg tggcgcacac
      961 caaagcgctc gtggagcttg tcgacctgcg acttgaaggt ctttgggtcc tgggtattgc
     1021 ccgcaaagag ctcgatgctg accgggcgcc cgtgcgcgtc cgtgagacac cccacgacaa
     1081 tctg
//
LOCUS       DASQSL010000911         1202 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_128671, whole genome shotgun sequence.
ACCESSION   DASQSL010000911 DASQSL010000000
VERSION     DASQSL010000911.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1202
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128671"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..422)
                     /locus_tag="VE844_09330"
     CDS             complement(<1..422)
                     /locus_tag="VE844_09330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015112491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenosine phosphosulfate reductase family
                     protein"
                     /protein_id="HZC01544.1"
                     /translation="MAIATTDIERLAIEYGTRHPQQILELAFGQFDNIAISFSGAEDV
                     VLIDMASRIKGGVQVFSLDTARLHPETYRLMDRVRERYDVAFEVLFPDPLAVEKLVRE
                     KGLFSFYKEGHRECCGIRKVAPLRRKLKTLDAWITGQR"
     gene            complement(465..>1202)
                     /locus_tag="VE844_09335"
     CDS             complement(465..>1202)
                     /locus_tag="VE844_09335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007877886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HZC01545.1"
                     /translation="PVVAIYSTFLQRAYDQLIHDVVNQNLPVLFAIDRAGLVGADGPT
                     HNGSYDLSFLRCLPNMVVMAPADENECRQMLYTGFLLDQPAAVRYPRGGGPGVVIERE
                     MTALPLGKAKLCREGKGIAILAFGTMLTPALEVGEEIGATVVNMRFVKPLDEALIREL
                     AWTHEWLVTVEENVIAGGAGSAVAELLAAHDIHTPVIHYGLPDRLISHGSREEMLENA
                     GLTVAGLRAFIVCHTAVNKPWRAVRSA"
BASE COUNT          268 a          367 c          321 g          246 t
ORIGIN      
        1 tttctctggc cggtgatcca ggcatccaag gttttgagct tgcggcgcag cggggccacc
       61 ttgcggatcc cgcagcactc cctatgcccc tccttataga agctaaacag ccccttttct
      121 ctcaccagct tctctacggc cagcggatcg gggaacagga cctcaaaagc gacatcgtac
      181 cgctcgcgaa cgcgatccat caggcgatag gtctcgggat gaagccgcgc cgtatccagc
      241 gaaaatactt gaacaccccc tttgattctg ctcgccatat cgatcaacac gacatcctct
      301 gccccgctga aagagatggc gatgttatcg aattgcccga acgcgagctc taggatctgt
      361 tgaggatgtc gagtgccgta ctcgattgcc aaacgctcga tatcggttgt tgcaatggcc
      421 attgagaatt atctctagga cttttgggga taaaacataa gcgattaagc actccgtaca
      481 gcgcgccatg gcttattgac agccgtgtgg cacacgataa acgcgcgcag tcctgctacc
      541 gtcagcccgg cattctcaag catctcttca cgcgagccgt gggaaattaa gcgatccggt
      601 aagccgtaat ggataaccgg cgtgtggatg tcgtgagccg ctaagagctc ggcgacagcg
      661 ctgccggcgc caccggcgat gacattctcc tcaacggtta caagccactc atgggtccag
      721 gccagctccc ggatcaaggc ctcatcgagc ggcttgacga aacgcatatt gactacggtg
      781 gcgccgatct cctcgcccac ctcgagggcc ggtgtaagca tcgttccaaa cgccaaaatg
      841 gcgataccct tcccctccct gcacagtttt gccttaccaa ggggcagggc cgtcatctcc
      901 cgttcgataa ccacaccggg tcctcctcca cgtggatagc gcaccgcggc cggttgatcg
      961 aggaggaagc cggtgtaaag catctgccgg cattcatttt cgtcagccgg cgccatcacc
     1021 accatgttgg gcaggcaacg taaaaagctt agatcatagc tgccgttatg ggtcgggcca
     1081 tcggccccaa ccaatccggc ccggtcaatg gcgaacaaca ccggtagatt ctgattgacc
     1141 acgtcatgga tgagctgatc gtaggcgcgc tgcaggaagg tggaatagat cgccaccacc
     1201 gg
//
LOCUS       DASQSL010000912         1375 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_128674, whole genome shotgun sequence.
ACCESSION   DASQSL010000912 DASQSL010000000
VERSION     DASQSL010000912.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1375
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128674"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            171..389
                     /locus_tag="VE844_09340"
     CDS             171..389
                     /locus_tag="VE844_09340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01546.1"
                     /translation="MTTRRSLTVKAQGPEARATFYIEARQGKVWVTTYDCPHVCVAIL
                     ETTQADSLVELINQTTNEARGYRKDASS"
BASE COUNT          285 a          384 c          411 g          295 t
ORIGIN      
        1 cgatcctgga tgctgcccag caccggcgag acgagtatgt acatgactgc caataacaag
       61 ctgctcaatg agccaaatcg tcatggtcag acactcgggt tgtccacaac tacggcacga
      121 gtggtgaatc cttctaactg cagtctccac ggtggcggcg gtgccacccc atgaccaccc
      181 gccgcagcct caccgtcaaa gcgcaaggcc cagaggcccg cgcgaccttc tatatagaag
      241 cgcgtcaggg caaggtctgg gtcactactt atgactgtcc tcatgtctgt gtggccattc
      301 tggagaccac gcaagctgac agtctggttg agctaatcaa ccagacgact aacgaggcac
      361 gggggtacag gaaagacgca tcgtcatgag tcggggtggg gcgatgccaa gcaccagtcc
      421 gacggcatgg gcatacttca actcgggaga ctgcacgata cggtggcagc gtggggatga
      481 ggttgcttat gtctttgagg gcaggcggct agagacgtac ccggatgaac gtttgagggt
      541 agaggtcttg gcgactatcc cggtctcttc taacggctgg agcgatatgg ctgacgttag
      601 gcgtgccgga gagaattggg tcaaggcccg tcgtcagcgc tgtaaggtct gcggagttgt
      661 ctcgtgagcc acgccgcgcc cgcgctttgt cgatgagcgc agactggtgg ctacccggtc
      721 agcgatgaac tgcgcgcggc tgttcgtaga gtctacgctc cggcagtggc gggctggcca
      781 tatccttgag gctgaactct gcctgactga gaactgagcg gccccggcat atgaatacct
      841 atgtggttac cgtgtaggca aggttgtcaa gattcaccga attgtcgtaa agtcgcttaa
      901 gtgccgtgtc tagcaactgc tctgcaggaa tccgggacgt cacgcttgtc tcggtgatcg
      961 atcgctctct tgctagatca gtcttaacgt cttgcaatag ctcgtccaag tcgttgagga
     1021 ataatcgatc ctttgtcctt tcgtatgtca atgttacaac gaaagcaacg atgatcccgg
     1081 gaaccgcggc gcgcatatta gacgtcaatt tatctgcgct ttcttaagac atcgcactac
     1141 gccgtcgcgg caagcagcgc tggtcggtct gctgcttctc tcatcggcag tgcgcggggt
     1201 ttgagcatcg aacctactcg tcgcctggta ccgtccgccc atgaccgagc gatcaagaat
     1261 cagagttcgc cgtccgccga gagcctggcg agtcggacgt cgaacttctg gtgctgcgcc
     1321 acgaggttgc cgtgctgcgc agagccaacc cgaagccccg cctggaacac atccg
//
LOCUS       DASQSL010000913         1304 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_184478, whole genome shotgun sequence.
ACCESSION   DASQSL010000913 DASQSL010000000
VERSION     DASQSL010000913.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1304
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184478"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1304
                     /locus_tag="VE844_09345"
     CDS             <1..>1304
                     /locus_tag="VE844_09345"
                     /inference="COORDINATES: protein motif:HMM:NF015891.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="secretin N-terminal domain-containing protein"
                     /protein_id="HZC01547.1"
                     /translation="PVEAGTGEYTLNFEATDIQEVVKIILGDILKESYFIDPKVAGVA
                     TIQTSRPLTRQQLLPTLENLLRLNGAALKRIDGIYKIVPIPQARSGSVGSVAPGYGTR
                     IVPLRSISAREMGKLLEPFLAPDSPKPLVDEPRNVLILSGSEPELQGLIEMVEVFDVD
                     WLQGMSLGIFKLQNAEAKTLAEELEKIFLGKDSPLTGLLRLVPIERLNALLVITQRPD
                     HLDQARRWIEQLDQVTDAVVPQLYVYRVKNGKAKDLAAVLAGLFGAEAKGPPGAPEAE
                     LAPGESPLRLETEAESETERPARGGASTGFKPGETKKTGAKTGETAPTVVATETLRII
                     ADEATNSLVIHATAQDYKMIEAALRHLDIVPLQVLIEASVVEVALTDDLQYGVQWFFK
                     NHFGGGRRAIGISGSEAGFETGPARLGGRMATLALGGFTYAL"
BASE COUNT          273 a          376 c          403 g          252 t
ORIGIN      
        1 accggtagag gctgggacgg gggaatacac actcaatttc gaggcgaccg atatccagga
       61 ggtcgtcaag atcatccttg gagacatcct caaggaaagc tattttatcg atccgaaggt
      121 tgccggggta gccactatac aaaccagccg gccgctgacc aggcaacaac tcctgcccac
      181 cttggaaaat ctgctgcggc tcaatggcgc ggcactgaag cgcatcgatg ggatttacaa
      241 gatcgtaccc attccccaag cccgaagtgg ttcggtcggg tccgtggccc ccggttatgg
      301 cacccgcatc gtgcccctgc gctctatctc ggcgcgggag atgggaaaat tgcttgagcc
      361 tttcctggcg cccgactcgc ccaaacccct cgtcgatgaa ccgcgcaatg tcctcatcct
      421 ctccggcagc gagcccgagc tccagggtct gatagagatg gtcgaggtgt tcgatgtgga
      481 ctggctgcaa ggtatgtcgc tggggatctt taagctgcaa aacgccgagg ccaaaaccct
      541 cgctgaggaa cttgagaaga tcttcttggg caaagacagc ccgctgacgg ggttgctccg
      601 cctcgtgcct atcgagcggc tcaacgcgct cctggtgatc acccagcggc cggaccatct
      661 ggaccaggcg cgtcgctgga tcgagcagtt ggatcaggtg accgatgcgg tcgtcccgca
      721 gctctatgtc tatcgcgtga aaaacggcaa ggccaaggat cttgcagccg tgctcgctgg
      781 gctctttggg gctgaggcca aaggacctcc tggggcgcca gaggcagagc tcgccccggg
      841 tgagtcgcca ctgaggctcg aaaccgaggc tgaatccgag actgaacggc ccgcaagggg
      901 gggcgcctcg accggcttta agccgggaga aacaaagaaa accggtgcca agacgggcga
      961 gactgcgcct accgtagtgg cgaccgagac tctgcgaatc atcgccgacg aggctaccaa
     1021 ctcgcttgtg atccatgcta cggcccagga ctataagatg atcgaagcgg ctcttcggca
     1081 tctcgatata gtgccgttgc aggtcttgat cgaggccagt gtagtcgagg ttgctctgac
     1141 ggatgatcta caatacggtg tacagtggtt cttcaagaat cattttggcg gcggccgccg
     1201 tgcgattggg atatcaggga gcgaggcagg ttttgagacc gggcccgccc gtctcggcgg
     1261 cagaatggcc actctagctc taggggggtt tacctacgct ctac
//
LOCUS       DASQSL010000914         1694 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_195814, whole genome shotgun sequence.
ACCESSION   DASQSL010000914 DASQSL010000000
VERSION     DASQSL010000914.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1694
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195814"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..190)
                     /locus_tag="VE844_09350"
     CDS             complement(<1..190)
                     /locus_tag="VE844_09350"
                     /inference="COORDINATES: protein motif:HMM:NF013828.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZC01548.1"
                     /translation="MSSLDLILRELHLGTMVRHAQEVAIRAEREGWSFTRYLHDLMEM
                     ELLERGQRRIQKRLKESGL"
     gene            complement(187..1671)
                     /gene="istA"
                     /locus_tag="VE844_09355"
     CDS             complement(187..1671)
                     /gene="istA"
                     /locus_tag="VE844_09355"
                     /inference="COORDINATES: protein motif:HMM:NF033546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HZC01549.1"
                     /translation="MTTTDLQVRIIMKELSKHGNQERAAVKAGVCRQTAAKYIQAGKL
                     SSELKRTHEWQTREDPFAEVWPEIEARLRQEPGVWVRFLFEDLQERYPGRFTPGQQRT
                     LHRHIAKWRALHGADQGHEVFFPQQHRPGEAGQTDFTHTQSLAMTLEGEPFAPLLCHF
                     VLPYSNWEWACRCQSESLLALKKGVQKAVFRLGRVPEWHQTDNSCGATHQVSTGGRAF
                     LPEYLELMAHLGMKPRTTAVGQKEQNGPVEAQNGAFKRYLNQRLQTRGSREFASVDAF
                     DEWLVESLTKENSRRQVRLQEELAVMKPLQVTRLPEYREVPVRVSRNSTINVMHNIYS
                     VPPRLMHHIVRVRLYEDTLEVYYHHTLIQTMPRLIGRAHHQVNYRHVIWSLVHKPGAF
                     ARYRYREDLYPSLTFRKVYERLQQVWPGTKGDAAYLRILHLAACTLESEVQVALELLL
                     ENGVLPTIEAVRDLVGPLPPESPVLPVPNVDLGSYDQLLEGAAR"
BASE COUNT          316 a          561 c          453 g          364 t
ORIGIN      
        1 gtaaacccga ctccttgagc cgtttttgga tccggcgctg cccgcgttcg agcagttcca
       61 tctccatgag gtcatgcagg tagcgggtaa agctccagcc ctcgcgttca gcccggatag
      121 ccacctcctg cgcatggcgc accatcgtgc ccaagtgtag ctcccgtaat atgagatcta
      181 gactgctcat cgggctgccc cctccagcaa ctggtcatag ctgccgagat ccacgttggg
      241 taccgggagc accgggctct caggtgggag cggcccgacc aagtcccgca ccgcttcaat
      301 ggtcggtagg accccgttct ccagcaggag ctccagagct acctgcacct cactctccaa
      361 cgtgcaggcg gcgaggtgca ggatcctcaa gtaggccgca tcccctttgg tccccggcca
      421 gacttgctgt aaccgctcat agaccttacg gaaggttaag ctgggataaa ggtcctcccg
      481 gtatcgatac cgggcaaagg cccctggctt atgcaccagc gaccagatca catgccgata
      541 gttgacttga tgatgcgccc gcccaatcag ccgtggcata gtttggatga gggtgtggtg
      601 ataatagacc tcaagcgtgt cctcatagag gcgtacccgc acgatgtggt gcatcaggcg
      661 cggcggcacc gagtagatgt tatgcatgac attgatcgtg ctgttacggc tgacccgcac
      721 tggtacctcc cggtactcgg gtaagcgggt cacctgcagc ggcttcatga ccgcgagctc
      781 ctcctgcagc cgcacctgcc ggcggctgtt ctccttggtg aggctctcca ccagccactc
      841 gtcaaaggcg tccacactgg caaattcccg actgccccgc gtctgcaggc gttgattcag
      901 atagcgtttg aacgccccgt tttgcgcctc gaccgggccg ttctgctcct tttggcctac
      961 cgccgtggtc cggggtttca tcccaagatg cgccatcaac tcgaggtatt cgggcaaaaa
     1021 cgctcgcccc ccagtagaga cttggtgcgt cgccccacaa gaattatcgg tttggtgcca
     1081 ctccggtaca cgccccaacc gaaagaccgc tttttgcacg cccttcttca gcgccaacag
     1141 cgactccgat tgacaacggc aggcccactc ccaattcgaa tacggcagca caaaatgaca
     1201 cagcaacggg gcaaagggct cgccctccaa ggtcatcgcc agactctggg tatgggtgaa
     1261 gtcggtttgt cccgcctcgc ccggccgatg ctgctggggg aaaaagactt catggccttg
     1321 gtctgcccca tggagtgccc gccacttggc tatatgccgg tgcagcgtcc gctgctgccc
     1381 gggggtaaac cgccctgggt aacgctcctg caaatcctca aacagaaaac ggacccatac
     1441 cccaggctct tgcctcagcc gcgcctcgat ctccggccac acttccgcaa acggatcttc
     1501 ccgcgtctgc cactcatggg tcctcttcag ctccgaggat agcttgcccg cctgaatgta
     1561 tttggctgct gtttgccggc atactcccgc cttgaccgcc gctcgctctt ggttcccgtg
     1621 tttgctcagc tctttcatga tgatcctcac ctgtagatct gtggttgtca ttcgctatgt
     1681 cctcccttaa ccaa
//
LOCUS       DASQSL010000915         1314 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_158047, whole genome shotgun sequence.
ACCESSION   DASQSL010000915 DASQSL010000000
VERSION     DASQSL010000915.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1314
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158047"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            104..1177
                     /locus_tag="VE844_09360"
     CDS             104..1177
                     /locus_tag="VE844_09360"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC01550.1"
                     /translation="MDWKHLLAYMTGSVDQELLVRNEYLVTENRILRQQIRGRVRLSD
                     GERKTLGKLGKRLGRQALAEVATIVKPETILAWHRMLVAEKFDGSPQRETPGRPPVDA
                     ELEALVVRLAQENRSWGYDRIVGALKHLGYAISDQTVGNILKRHGIPPAPKRKKTTTW
                     QEFIRTHLDVLVATDFFTAEVWTAAGLVTYYVLFFMHLASRKVHVAGVTPHPDQSWIL
                     QVGRNATMVDWGFLEPGQYLIHDRDEKFFPAFQQLIDAAGVTRVPLPARSPNLNAYAE
                     RWVRSVKEEVLSQLILFGERSLRYALTEYVTHFHQERPHQGKDNVVLMPTVAPAQLTT
                     RGNPIRCRERLGGLLKYYDRAAA"
BASE COUNT          271 a          375 c          414 g          254 t
ORIGIN      
        1 aatttatagg cccactactg cctgctctct gccttgattt ccctctggcg atgccccata
       61 ctcactcacc caggaagcca catgagtaga ggtggggaaa cctatggatt ggaagcactt
      121 actggcctat atgacaggct cggtagacca ggaactcttg gtgcgcaacg aatatctggt
      181 cacagaaaac cggatcctgc ggcagcagat ccgaggccgc gtgcggctga gcgatggcga
      241 gcggaagacg ctgggcaagc ttgggaaaag gcttggaagg caagccttgg ctgaggttgc
      301 caccatcgtc aagcctgaga cgatcctcgc ctggcaccgt atgctggtgg cggaaaagtt
      361 cgatggctct ccgcagcgcg agacgccagg gcgccctcca gtcgatgcgg agctggaggc
      421 gctggtggta cggttggccc aggagaatcg ttcctggggg tatgaccgca tcgtcggggc
      481 tctgaagcac ttgggttatg ccatcagtga ccagacggtg gggaacattc tcaagcgcca
      541 tgggattccc ccagcgccga agcgaaagaa gacgacgacg tggcaggaat tcattcgcac
      601 gcacctggac gtgctggtgg ccacggattt ctttaccgcc gaggtgtgga cagcggcagg
      661 tctggtcaca tactacgtcc tgttctttat gcacctcgcg agtcgcaagg tccatgtggc
      721 tggggtcaca ccacaccccg atcagagctg gatattgcag gtgggccgca acgccaccat
      781 ggtggactgg ggcttccttg agccagggca gtatctcatt cacgatcgag acgagaagtt
      841 cttcccggcc tttcagcagc tcattgatgc ggccggggtg acgcgggtgc cgctgccggc
      901 tcggtcgccg aatctcaatg cctacgcgga gcgttgggtg cgctcggtga aagaggaggt
      961 cctctcgcag ctcatcctct ttggcgagcg atccctccgg tatgcgctca ccgaatacgt
     1021 gacacatttt caccaggaac gtccccacca gggtaaggac aacgtcgtcc tcatgcctac
     1081 tgtcgcacca gcgcagctta cgacacgggg gaaccccatc cgctgccggg aacgactggg
     1141 tgggctgttg aagtattacg accgcgcggc ggcatagggg ccgtgacgcg cgagcctccc
     1201 ggatgctcca ccctggagca tctcgatatc atcagagagg agtgatagat gggcaaagtg
     1261 accgtcgatc agattctggc ggaggcgaag accttatccc gcgatgagca gcag
//
LOCUS       DASQSL010000916         1116 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_144436, whole genome shotgun sequence.
ACCESSION   DASQSL010000916 DASQSL010000000
VERSION     DASQSL010000916.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144436"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..895
                     /locus_tag="VE844_09365"
     CDS             <1..895
                     /locus_tag="VE844_09365"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01551.1"
                     /translation="TTVARIKDDLRGWKLGRSIFVADAGMNSEDNRLELARGVGKYVL
                     AMPLGRVAEVKETVLRRPGRYRPLQHNLLAKEVVVGEGERRRRYIVCFNPHEAERQAK
                     HRTQVIEALKAELARHKDPRATAKWAMELLTSGRYGRYLTVTDPGQVRLDPHAIRQAQ
                     RLDGKWVLLTNDDTLSIQDAALAYKSLMVIERCFRSLKRGQIYLGPMYHRLPQRIEAH
                     LKICVLALLIQRVVEHTVGESWFQLRPCLNSLQATELRTATHRFFQRNEPTQELRDLF
                     KKLDISMPKQVLAIQPLTPKV"
BASE COUNT          235 a          338 c          317 g          226 t
ORIGIN      
        1 caccacggtg gcccggatca aggacgacct gcgaggttgg aagctgggcc ggtcgatctt
       61 cgtggccgat gcgggcatga actctgagga taatcgtctg gagctcgctc ggggggttgg
      121 aaagtacgtg ctggccatgc ccctcggtcg ggtggccgaa gtcaaggaga cggtgttacg
      181 tcgacccggg cggtatcgcc cgctccagca taatctcctc gccaaggagg tggtcgtagg
      241 ggagggggaa cggcgacggc ggtatatcgt ctgcttcaat ccgcacgagg ccgaacgcca
      301 agccaagcac cgcacccagg tcatcgaggc gctcaaagcc gaactggccc gccacaaaga
      361 cccccgtgct accgccaagt gggctatgga gttgctgacc tctggtcgtt acgggcgcta
      421 cctcacggtc accgacccag gccaggtgcg tctggaccct cacgcgattc gacaggccca
      481 acgcctcgat ggcaaatggg tgctgctcac caacgacgac accttgagta tccaagatgc
      541 cgccttggct tataagagtc tgatggtgat cgagcgctgc tttcggtccc tcaagcgggg
      601 ccagatctat ctcggtccta tgtatcaccg cttaccgcag cgcatcgaag cccatctgaa
      661 gatctgcgtc ctggccctac tcatccagcg ggtggtggag catacggtcg gtgaatcctg
      721 gtttcagctt cggccctgcc tcaatagcct tcaagccact gagctgagaa ccgctaccca
      781 ccgatttttc cagcgaaatg aacccaccca agaactcagg gatttattca aaaagcttga
      841 tatttcaatg cctaaacaag tcctagcgat ccagccattg actcccaaag tgtaggcaca
      901 cgcctttctc gtcctacctc gctaagtccc tgtggaaaca taagaatttg ctttgcgtat
      961 gcccaccctt ccgaaaccca ggcctggaga ccatgacgcc gctggtggcg gcctacgggg
     1021 gggtagtaat acggtttatt ggcgatgcga ttatggccgc ctttggtgta cccatgcccc
     1081 gacacactga gaccgagctg tgtcaggatg ctacca
//
LOCUS       DASQSL010000917         2535 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_87661, whole genome shotgun sequence.
ACCESSION   DASQSL010000917 DASQSL010000000
VERSION     DASQSL010000917.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2535
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87661"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..817)
                     /gene="argC"
                     /locus_tag="VE844_09370"
     CDS             complement(<1..817)
                     /gene="argC"
                     /locus_tag="VE844_09370"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011379921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HZC01552.1"
                     /translation="MINVGIVGGTGYTGAELLRLLALHPKVRLSVVTARAEAGMRIAE
                     IFPNLRGYIDLEFSLLDTEKLARCDLVFFATPNGTAMTLVPGLLEAGVRIIDLSADFR
                     LKDISSWERWYGMPHACPELVQEAVYGLPEANRKLLQGARLVANPGCYPTAVLLGFLP
                     LVESRLVKLDQLIADTKSGVSGAGRKAVVNSLFSEAGDNLKAYAVAGHRHWPEIVQAL
                     SAQAGDRVDLVFVPHLIPMVRGIHATLYGALVRTDIDLQEVYTARYLNEPFIDV"
     gene            934..1557
                     /locus_tag="VE844_09375"
     CDS             934..1557
                     /locus_tag="VE844_09375"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004180821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HZC01553.1"
                     /translation="MNYCSSCGAVLQRKIPPGDNRPRFVCGSCNTIYYQNPKIVTGCL
                     AEWENKVLMCRRAIIPRQGLWTLPAGFMENDETVVEAAIRETYEEANAGVEIIDLFTI
                     FNLPHVNQVYMMFRARLRDLNYRPGEESLEVDLFDEAQIPWDRLAFATIHHTLRLYFH
                     DRQAGHFGFHMGDIIKIGDQTSLVERRPNPPTEFIPTTILHPKEKSQ"
     gene            1554..>2535
                     /gene="sat"
                     /locus_tag="VE844_09380"
     CDS             1554..>2535
                     /gene="sat"
                     /locus_tag="VE844_09380"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018879327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase"
                     /protein_id="HZC01554.1"
                     /translation="MIKPHGSEILNPRFVYDVEQHHALQRAAQTLPSLVLNSAAAANA
                     VMLGAGYFNPLPGYMDLAEALSVAERMQTTQGLFWPIPCLNLAQDVAAIKGATRIALR
                     DPNMEGYPVLAIQEVEAIEAIGEAELDFVVEEVFRTRDRTHPGVANLYSLGRYLISGP
                     IQVLNFSYFQQDFPDTFRTAVEIRNEIQEHGWKTVVAFQTRNPMHRAHEELCKMAKEA
                     VDADGILIHMLLGKLKEGDIPAVVRDAAIRKMVELYFPPNTVMVMGYGFDMLYAGPRE
                     AVLHAIFRQNAGCSHLIVGRDHAGVGNYYGPFDAQRIFDEEVPPSALLIQI"
BASE COUNT          601 a          690 c          683 g          561 t
ORIGIN      
        1 tcacatcgat aaaaggttca ttcagataac gcgctgtgta tacctcttgc aggtcaatgt
       61 cggtgcgaac caacgctcca tacagggtag catgtatgcc ccggaccata gggatcagat
      121 gaggcacaaa aaccagatcg accctatccc ctgcctgagc agacaacgcc tgaacgatct
      181 ccggccaatg cctgtgtccg gccacggcgt aagcttttag attatcaccc gcttccgaga
      241 agaggctatt gactaccgcc ttgcgtcccg caccgctcac acccgatttg gtgtctgcga
      301 taagctggtc gagcttaacc aaccgggatt ccaccaaggg gaggaaccct agcaaaaccg
      361 ccgtgggata acagcccgga ttggctacta aacgtgcgcc ttgaagcaat ttacggtttg
      421 cctcgggcag gccatagacc gcctcttgca caagctctgg acaggcatgg ggcataccat
      481 accaccgctc ccatgagctt atgtctttga gccggaaatc cgccgacagg tcgatgatcc
      541 ggaccccggc ctcgagcaaa cctggcacca gggtcatggc ggtgccattg ggcgttgcaa
      601 agaacacgag atcacatctt gctagcttct ctgtatcgag tagactaaac tccaaatcga
      661 tatagccacg cagattagga aatatctctg cgatccgcat gcccgcctcg gcgcgtgcgg
      721 taactaccga caggcgaacc ttgggatgca aagccagcag gcgcaaaagc tctgcgccag
      781 tataacccgt gccaccgaca atgcctacat taatcatagg tcctaaagca aaaggaaaaa
      841 ccgaaaataa caataccgcg cttcttcctc tagagcaact cgagcgggat caggtgctct
      901 tgaaagggca tccatctata gcagcatgaa gttatgaatt attgtagtag ttgtggcgcg
      961 gtgctccaaa ggaagatacc tcctggggat aatcgcccgc gctttgtctg tggatcctgc
     1021 aataccatct attaccagaa cccaaagatc gtgacgggct gcctcgccga gtgggaaaac
     1081 aaggtgctga tgtgtcgccg tgcgattata ccacggcaag ggttatggac attaccggcg
     1141 ggattcatgg agaatgacga gaccgtggtg gaggcggcca tccgcgagac ttatgaagaa
     1201 gccaatgccg gtgtggagat catcgatcta tttacgatct tcaatctgcc ccatgtgaac
     1261 caggtttaca tgatgttcag agcccgcctg cgggatctca attaccgccc tggagaggaa
     1321 agcctggagg tcgatctctt tgacgaggcc cagatcccct gggaccggct tgcctttgcc
     1381 accatccacc ataccctccg tctttacttc catgacaggc aggcgggcca ttttgggttt
     1441 catatgggcg atatcatcaa aataggcgat caaacaagcc tggtagaacg ccggccaaac
     1501 ccaccgaccg agtttattcc aacgacaatc ctgcatccca aggagaagag ccaatgatta
     1561 aaccgcatgg atcggagatc ttaaatcccc ggttcgttta tgatgtcgag caacaccatg
     1621 cattgcagcg agcagcccaa accctgccat cgctagtgct caattcagcc gctgcggcca
     1681 atgccgtgat gttgggtgcg ggctatttca atccgctgcc gggctatatg gatctggccg
     1741 aggccctcag tgtggctgag aggatgcaga ccactcaggg gctcttctgg cccattcctt
     1801 gcctcaatct cgctcaggat gtcgcagcga ttaaaggggc cacgcgcatc gccctgcgtg
     1861 atccgaatat ggagggttat ccggtgctgg cgatccagga ggtcgaggcg attgaagcga
     1921 tcggtgaggc ggagctcgat ttcgtcgtgg aggaggtctt taggacccgg gatcgcactc
     1981 atccgggtgt ggctaatctt tattcgttgg gccgatacct gatttcaggt cctatccagg
     2041 tcttgaattt cagctatttt caacaggatt ttccggatac cttccgtacc gcagttgaga
     2101 tccgtaacga gatccaagag catggctgga aaacggtggt cgcttttcag acccgcaatc
     2161 ccatgcatcg cgcccacgaa gagctctgca agatggccaa agaggcggtt gacgccgatg
     2221 gcatattgat tcacatgttg cttggcaagc tcaaggaggg cgatatccct gcggtggtgc
     2281 gggatgcagc catccgcaag atggtcgagc tctattttcc gcccaatact gtgatggtca
     2341 tgggctatgg cttcgatatg ctctacgccg gaccgcgcga ggcagtgctg catgctatat
     2401 tccggcaaaa cgccggctgt agccatctga ttgtgggccg tgatcatgcc ggggtgggta
     2461 attattacgg acccttcgat gcgcagagga tattcgatga agaggtgcct ccaagtgctt
     2521 tattaattca gatct
//
LOCUS       DASQSL010000918         1091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_75678, whole genome shotgun sequence.
ACCESSION   DASQSL010000918 DASQSL010000000
VERSION     DASQSL010000918.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1091
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75678"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..199)
                     /locus_tag="VE844_09385"
     CDS             complement(<1..199)
                     /locus_tag="VE844_09385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01555.1"
                     /translation="MTPLPKYLTQDELKRFFAAIESPRDRALFGLIYHYDLRVGFTRY
                     FRSPTPWETLDRDTLQYRLLLA"
     gene            complement(348..842)
                     /locus_tag="VE844_09390"
     CDS             complement(348..842)
                     /locus_tag="VE844_09390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01556.1"
                     /translation="MARNTSTRTTRAIVPPDAQQPRCGLCGNTGNLTRTDCCGHWMCD
                     DEHTYVLFSYARNSCHRNHSRYTLCSYHYNEGHAGDWQTCRICRESFETEMYVWYGTN
                     DYNFETLKNPPSYQPTRCASCGTVIRLGEDGYTLTPQGTYVCLACADVPADLKPKASR
                     RKRS"
     gene            complement(875..>1091)
                     /locus_tag="VE844_09395"
     CDS             complement(875..>1091)
                     /locus_tag="VE844_09395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018196775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HZC01557.1"
                     /translation="RDLRRLDAQVHRRVLAALDALQANPYQGQQLTEVPIGQWRIRVG
                     DYRIRYDIEGSRVLLYRVRHRKDIYRE"
BASE COUNT          229 a          292 c          332 g          238 t
ORIGIN      
        1 aggcgagcag gaggcggtat tggagggtgt cccggtccaa ggtttcccag ggcgtgggac
       61 tgcgaaagta tcgggtaaag cccacgcgca ggtcgtagtg gtagatgagg ccaaagagcg
      121 cccggtcgcg cggggactcg atggccgcga agaagcgctt cagctcgtct tgggtgaggt
      181 atttggggag tggggtcata gaatttaaat cgcatcattt acccgaaagg tgtgattcca
      241 ctataccacg gccacgcaag taggccaaaa accaggcccc tccgaggggc tggtttgtac
      301 tgaaaggtgc gattcgattt ttgttgggcc tcatgcccag cccggattca cgatcttttc
      361 cgacgagacg ctttgggttt cagatctgcg ggtacgtcgg cacacgccaa gcagacatac
      421 gttccctgcg gcgtgagtgt atagccgtcc tcccccaagc gaatgaccgt gccgcatgag
      481 gcgcatctgg tgggttgata cgagggtgga ttcttgagtg tctcaaaatt gtagtcgttg
      541 gtgccatacc agacatacat ctcggtctca aagctctccc gacatatcct gcacgtctgc
      601 caatcgcctg catggccttc attgtaatgg tatgagcaga gggtgtagcg ggagtgattg
      661 cgatgacaac tattacgcgc ataggaaaag agcacatagg tgtgctcatc atcgcacatc
      721 caatggccac agcagtccgt gcgcgtcaga ttccccgtgt tcccacataa cccgcagcgt
      781 ggctgctgcg catcgggcgg cactatcgcc cgcgtcgttc gtgtgctggt gttcctggcc
      841 atggtgatcg ctccataaaa ggaagccagg tgtgctactc tcggtaaatg tctttccggt
      901 gacgaacacg gtagaggagc acccggcttc cttcaatgtc atagcgaatg cggtagtcgc
      961 ccacccgaat cctccactgg ccaatcggta cctcagtcaa ttgttgaccc tgataggggt
     1021 tggcttggag cgcgtcgagg gccgccagca cacgccgatg cacctgagca tcaaggcggc
     1081 ggagatcgcg g
//
LOCUS       DASQSL010000919         1381 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_102452, whole genome shotgun sequence.
ACCESSION   DASQSL010000919 DASQSL010000000
VERSION     DASQSL010000919.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1381)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1381)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1381
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102452"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            547..>1381
                     /locus_tag="VE844_09400"
     CDS             547..>1381
                     /locus_tag="VE844_09400"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HZC01558.1"
                     /translation="MNHLLDIKKSMAISMTIVLTLVILLSTSGSAMGQENKVAPGRNV
                     PTAPQQQQGPTDPAELEAFLDELLGKEMEENHIPGAAVSVVKDGKLFFAKGYGSADIE
                     NKIPVDPEQTIFHVGSVGKLFTWTAVMQLVEEGKLDLDEDVNTYLDFRIPDTYPQPIT
                     LRHLMTHTSGFEDRLLDSVVSDTSEVIPAREWLVTYMPARVCPPGDCAGYSNYNAMLA
                     GYIVARVSGEPYHQYIQEHIFDPLDMVHSTAQSPIPPDLRAHASVGYTYEDGDFQAFP
                     DY"
BASE COUNT          329 a          394 c          397 g          261 t
ORIGIN      
        1 gtcgtcgccg gcggcatggc ctccaccacg gctcttaccg gctcgaccga ggagatgcag
       61 ttcaacgacg cggacgacga cccgcgcacc gagatcgccg acgagaaagg gcaactcctc
      121 aaatagctgt cagctcttag agaccggcga ggggccggag atccggcccc tctttcgtat
      181 ccgcgggccg cgaacttcgt tgtcccaacg aatgtccctg tcatgagggg acaaagaaca
      241 ggacaccggg ctcatgacgg cgggacgttg cgcggattag gctgcttgca gacctcgaaa
      301 gtagcagcga agacgatgta ccgaagcacg aattcggaag gaggttcgat aaagatgaat
      361 gcggaaggtc agatcgagcg cggcggagtt gaaggggtat ccgcggtaga agggacgccg
      421 agccagagcg agcagtactc tctggccaag atcctgggtg gatcatcgtg cacagctctc
      481 agagcgtctt cttcctcgtc ctcctcctgc tcctggtcct caagtagcca tcgagaggag
      541 aaagagatga atcacctgct cgacatcaag aaatccatgg cgatatctat gacgatcgtg
      601 cttactctgg tgatactgct atcgaccagc ggatcagcca tgggccaaga gaataaggtc
      661 gccccgggca ggaatgtacc cactgcgcca cagcaacaac aaggcccgac cgatcccgcc
      721 gaactggagg ctttcctgga tgagctgtta ggtaaagaga tggaagagaa ccacatcccc
      781 ggggcagccg tcagtgtcgt caaagacggt aagttgttct ttgccaaagg ctacggctcc
      841 gccgatattg agaacaaaat ccctgtcgac cccgagcaga cgatctttca cgttggatca
      901 gtcggcaagc tgttcacctg gacggcggtt atgcagctcg tcgaagaggg aaagctggac
      961 ctcgacgagg atgtcaacac ctatctcgac tttcgtatcc cggataccta tccacaaccg
     1021 atcaccctca ggcacctcat gactcacacg tcagggttcg aagaccgatt gctcgatagt
     1081 gtggtctcgg ataccagcga ggtgataccc gcgcgcgaat ggctggtcac ttatatgccg
     1141 gcgcgggtgt gtccacccgg tgattgtgcg ggttactcga actacaatgc aatgctggcg
     1201 ggctacatcg tggcgcgggt atcgggagag ccctaccacc agtacatcca ggaacatata
     1261 tttgacccac tggacatggt gcactcaact gcccagtcgc cgataccgcc agacctacgc
     1321 gcacatgcat ccgtgggata tacgtatgaa gatggcgact tccaggcatt ccccgattac
     1381 a
//
LOCUS       DASQSL010000920         1019 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_128699, whole genome shotgun sequence.
ACCESSION   DASQSL010000920 DASQSL010000000
VERSION     DASQSL010000920.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128699"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(59..544)
                     /locus_tag="VE844_09405"
     CDS             complement(59..544)
                     /locus_tag="VE844_09405"
                     /inference="COORDINATES: protein motif:HMM:NF033558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HZC01559.1"
                     /translation="MNHAVLQHLHPAHVEVEICRAAELDQRRGLTSELDEMWSYVGKK
                     AQPRWLWHAIDHHSGTVFASVFGRRKDAVFLQLQALLEPFGIRRFYTDGWGTYMRHLD
                     PAKHTVGKQHMQTIESKHINLRTRIKRLVRRTLCFSKTERMHELVIGQFVNRYEFGRV
                     I"
     gene            complement(541..828)
                     /locus_tag="VE844_09410"
     CDS             complement(541..828)
                     /locus_tag="VE844_09410"
                     /inference="COORDINATES: protein motif:HMM:NF024169.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HZC01560.1"
                     /translation="MMTQVLHCPSCQGTDMVRHGKTPQGKQRYRCRQCPDRGRTFLLD
                     YSYPGQSQYIKEQIVDMAMNASGIRDTARVLHVSPTTVIKELKKRNQTCTR"
BASE COUNT          208 a          283 c          297 g          231 t
ORIGIN      
        1 gagtgcgcga ccgcgatgat ggcccgtttg agggtgtttc agagttgtgg atctcctgtt
       61 agatgactcg cccgaactca taacggttga cgaactgtcc gatgaccagt tcatgcatac
      121 gctcggtctt cgaaaagcag agcgtccggc gcaccaaccg cttgatccgt gtccgtaaat
      181 tgatgtgttt gctctcgatg gtctgcatgt gctgtttgcc aacggtgtgc ttcgcggggt
      241 ccagatggcg catgtaggtg ccccagccat cggtgtagaa acggcggatc ccaaacggtt
      301 cgagtaacgc ctgcagctgc agaaagaccg catccttgcg cctcccaaag acagaggcga
      361 agacggtacc actgtggtga tcgatggcgt gccataacca ccgtggttgg gctttcttgc
      421 ccacatagct ccacatctca tcgagctccg acgtcagccc acggcgctgg tccaactccg
      481 cagcgcggca gatctccacc tccacatgcg ctggatgcag gtgctgcaac accgcatgat
      541 tcacctggtg caggtctggt tccttttttt gagttccttg atcaccgtgg tgggactgac
      601 gtgcaacacg cgggccgtgt cacgaatccc actggcattc atggccatat cgactatctg
      661 ctctttgata tactgggatt ggccgggata ggaatagtcc agcagaaagg tgcgacctcg
      721 atctgggcac tggcggcagc ggtagcgttg cttgccttgc ggagtcttgc catgtcgcac
      781 catatcggtc ccctggcagg agggacagtg taggacttgg gtcatcatag tacctcgcga
      841 tcagatggtc attctgctcc tcgaacacgc tcagagagaa tatcagatcc acaactgtga
      901 aacaccttcg aagatagtac gctgttggcc acggtcggcc agtgataccg gcgaaaacgt
      961 tccggttggg ggactgcaac gagctcgttg agctgcccca cgagtgaccg gtgggtgaa
//
LOCUS       DASQSL010000921         1430 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_75717, whole genome shotgun sequence.
ACCESSION   DASQSL010000921 DASQSL010000000
VERSION     DASQSL010000921.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1430
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75717"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..573
                     /locus_tag="VE844_09415"
     CDS             <1..573
                     /locus_tag="VE844_09415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01561.1"
                     /translation="IARVPGCLRSVFIVLFGSSSLNQETHTMFGPGEYRPDPSEGITT
                     PAELPPPELIRYYRSDTRQPCPRCGHSAYRDKEHHRTLHDLGNLDLWCPRELIVTYSQ
                     HSCTKCRKYFNYDLSDLAPPGSHYTHRVIDLAVRIVVEDGLPYRPASWHLWRDHRVFV
                     PFGTLQNWVEAGGKKGAEAHGHRVSRLGAR"
     gene            539..>1430
                     /locus_tag="VE844_09420"
     CDS             539..>1430
                     /locus_tag="VE844_09420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01562.1"
                     /translation="MDTEFLDWALADFSGYVAADELYDGPFCILSAVDNRCYKRILYD
                     VLDHDPNHDDIRAFLGRLQSALQARDLTLLGITTDGSSLYPEPLAEIFSGVPHQICQF
                     HVIKELTKGVLQGVAKERERLAQLKPKLKRGRPSSKDKAARRAARKSKAIQEKSRDLF
                     QERYLFVKRRLKPSERKRLLFITRGLPQLRKLRELMEQVYALFDRRCRTQTALDKLTK
                     LRRRLSRFKHLGETLKKLYSLTLEKALTFLDDKLLPSTSNAVERGNRRYRKMQKSIYS
                     VRTRDQIKARIALDMWREAQG"
BASE COUNT          309 a          421 c          392 g          308 t
ORIGIN      
        1 atagcaaggg tgccgggttg cctccgctcg gtatttatcg tattgtttgg gtcctcatct
       61 ttgaatcagg agacccacac catgtttggc ccaggagagt atcgacccga cccaagcgaa
      121 ggcatcacga cgcccgccga gctgccaccg cccgagctca tccgctacta tcgctctgac
      181 acccgacaac cgtgtccacg ctgcggacac tcggcctatc gcgataaaga gcatcatcgc
      241 accctacacg atttaggtaa tctcgacttg tggtgtccgc gggagctcat cgtcacctat
      301 tctcagcatt cctgcaccaa gtgtcgcaag tacttcaact acgatctgtc tgatctagcg
      361 ccaccgggca gtcattatac ccaccgtgtc atcgatctgg cggtgcgtat cgtggtggag
      421 gatggcttgc cctaccgccc agccagttgg catctatggc gagaccaccg ggtgtttgtg
      481 ccctttggca ccctccaaaa ctgggtggag gcagggggga aaaaaggcgc agaggcgcat
      541 ggacaccgag tttctcgact gggcgctcgc tgatttttcg ggctatgtgg cggccgatga
      601 actctatgat ggccccttct gtattctctc cgccgtggat aatcgctgtt acaaacgcat
      661 cctctatgac gtcttagacc acgatcccaa tcacgatgac atccgggctt ttctggggcg
      721 gctccaaagc gccttgcaag cgcgtgactt gacgctgctt ggcatcacca cggatggctc
      781 gtccctctat cccgagcccc tcgccgagat ttttagtggg gtgccgcacc aaatctgcca
      841 gtttcatgtc atcaaggagc tcaccaaagg ggtgctccag ggggtcgcta aagagcgtga
      901 gcgtttagct cagttgaagc cgaagttaaa acgcggccgg ccttcgtcca aggacaaagc
      961 cgcgcgccgc gccgctcgca aaagcaaagc gatacaagag aaaagccgtg atttgtttca
     1021 ggagcgctac ttgtttgtca agcgtcgctt gaagccaagc gaacgcaaac gactcctgtt
     1081 catcacccga ggcttgccgc agctgcgcaa gttgcgtgag ctcatggagc aggtctatgc
     1141 gttgttcgat cgccgctgcc gtactcagac ggcgctcgat aaactcacga agctgaggcg
     1201 gcgcctgagc cgcttcaagc atctgggcga gaccttgaag aagctctatt cgctaaccct
     1261 ggagaaagcc ctaacgtttc tcgatgacaa actactcccc tcgacgtcga atgcggtcga
     1321 acgcggcaat cggcgttatc gtaagatgca aaagagtatc tacagtgtgc ggactcgcga
     1381 tcagatcaag gcgcgaattg cgctcgacat gtggcgcgaa gcccaaggtg
//
LOCUS       DASQSL010000922         2431 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_195886, whole genome shotgun sequence.
ACCESSION   DASQSL010000922 DASQSL010000000
VERSION     DASQSL010000922.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2431
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195886"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..292
                     /locus_tag="VE844_09425"
     CDS             <1..292
                     /locus_tag="VE844_09425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01563.1"
                     /translation="KYRVGLVIANQFLDQFDRRLLAAVKTNTAIKMVGGLSNDDARDF
                     AREMNCEREFIQSMQKAERFTQFACSVKNHPSSPLRLKVPLGLLDQQPKINP"
     gene            367..606
                     /locus_tag="VE844_09430"
     CDS             367..606
                     /locus_tag="VE844_09430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01564.1"
                     /translation="MENTQPQLISTAAYAPVSGENATPFSQQMVVLTKQDYIALKWEA
                     NYWRTQHARLVQREAALKAQVETLEAQLRDLNQRL"
     gene            643..2091
                     /locus_tag="VE844_09435"
     CDS             643..2091
                     /locus_tag="VE844_09435"
                     /inference="COORDINATES: protein motif:HMM:NF033517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HZC01565.1"
                     /translation="MGKANPLNPRKRGQQPGSQGHGRSDRSIVPVVVEVHDLSERAKH
                     CPQCGEALAPFPGVETCDIIEVQVQAYMRRIQRPRYQKRCRCPQLPGIVTAPPAPRVI
                     PKSPLGVSVWTMVLLDKYLYSRPTHRLCQELEHHGLHMPQGTITDGLQRLKGLFEPLM
                     PVLYERQMTEKLFHGDETRWEVFEEIEGKTGHRWYLWVMPSVSVVYYRMAPGRGADIP
                     KGHFAELRKDLLKVVLVCDRYSAYKSLALACDELILAFCWAHVRRDFLKAARSWPALE
                     SWMFTWIDDIRELYRLNAARMKEWDEELPLDQQSSVFDERHNDLVTKLNQMKERCAGE
                     LQEPKLHLVKQKVLSSLQNHWDGLTVFVTRPEVAMDNNTAERILRNSVVGRKNYYGSA
                     SVWSAHFAAMMFSVLQTLLLWGLNPYHWLRAFLQACADHGGQSPADLSPFVPWQMSAD
                     RREALSQPLPVMGLALGGLAQEQREPEAIDTS"
BASE COUNT          577 a          655 c          686 g          513 t
ORIGIN      
        1 aaaatacagg gtggggctgg tgatagccaa ccaattctta gaccaattcg accggcgctt
       61 actcgcagcg gtgaaaacca atacggcaat caagatggtc ggcggcctct caaatgacga
      121 tgcgcgggat tttgcccgtg agatgaattg tgagcgggaa tttatacagt cgatgcaaaa
      181 ggccgagcgg ttcacgcaat tcgcctgtag tgtgaaaaat catccatcct ctccgctgcg
      241 cctgaaagta ccccttggtc tgttggatca acaacctaaa atcaatccat agtaaataat
      301 cggccatccc attgcgccca tcaaaaaaac gggacttttc caaaaaagct gatataacat
      361 tagcttatgg aaaatactca gccacaactc atttccaccg cggcctatgc accagtgagt
      421 ggcgagaacg ccacgccctt ctcccaacag atggtggtgc tgacgaagca ggactatatc
      481 gccctcaaat gggaagccaa ctactggcgg acccaacacg cgcgcctagt gcaacgcgaa
      541 gcggccttga aggcgcaagt cgaaacgctc gaagcgcagc tacgcgacct caaccaacgc
      601 ctatagggga aaaagagcga gaaatccacc ggttccgagg ctctgggcaa ggccaatccg
      661 ctcaatcccc gcaagcgggg ccaacaaccg ggctctcagg ggcacggccg cagtgatcgt
      721 tccattgtgc ccgtggtggt ggaagtgcat gacttgagcg agagggccaa acactgtccg
      781 caatgtggtg aggcgctggc gccgtttccg ggcgttgaaa cgtgcgatat catcgaagtc
      841 caggttcagg cctacatgcg acgcatccaa cgcccgcgct accaaaagag gtgtaggtgc
      901 ccccagctcc cgggcattgt gacggcgcca ccggcaccgc gcgtgatccc gaaaagccca
      961 ttaggggtgt cggtgtggac gatggtgttg ctcgacaaat acctctatag ccgcccgacc
     1021 caccgcttat gtcaggaact ggagcatcac ggcttacata tgccgcaggg cacgattacc
     1081 gatgggttgc aacgcctcaa ggggttgttt gaaccgctga tgccggtgct ttacgagcga
     1141 cagatgacag agaagctctt tcatggtgat gaaacgcgct gggaagtctt tgaagagatc
     1201 gaaggcaaaa cgggtcatcg ctggtatctg tgggtgatgc cgtccgtctc cgtggtgtac
     1261 taccgcatgg ccccgggtcg tggagctgat atccccaaag ggcattttgc cgagttgcga
     1321 aaggacctgc tcaaagtggt gctggtgtgt gaccgctaca gtgcctacaa aagcctggcc
     1381 ctggcgtgtg acgagctgat tttggctttt tgttgggcac acgtacggcg tgactttctc
     1441 aaggcggcac gcagttggcc ggcacttgag agttggatgt tcacgtggat cgacgatatc
     1501 cgtgagctct accgcctcaa tgcggcccgt atgaaggaat gggatgagga gttgccgctt
     1561 gatcaacagt catcagtctt tgatgagaga cacaacgact tagtgacgaa actcaatcag
     1621 atgaaagagc gctgtgcggg agagcttcaa gagcctaagt tacacctggt taaacagaag
     1681 gttctaagca gcctacaaaa ccattgggac gggctcacgg tgtttgtcac gcgtccggaa
     1741 gtcgccatgg ataacaacac ggcggagcgc atcctacgaa attctgtagt gggtcgaaag
     1801 aactattatg gctctgctag cgtgtggagt gcacacttcg cggcgatgat gtttagcgtg
     1861 ctgcaaacgc tcttgctttg gggcctcaac ccatatcatt ggttgcgcgc tttcttacaa
     1921 gcctgtgcgg accatggtgg ccagagccca gccgacctca gtccctttgt gccttggcag
     1981 atgagtgccg atcgccgaga agcgctgtct caaccactgc cggtgatggg gcttgctttg
     2041 ggtggtctcg cccaagagca acgagagcca gaagccatcg atacatccta agacctgccc
     2101 tccctgatcg cgttcctcaa atgtagagcc atgtcggcat cacttgctcc agatgccgca
     2161 agagaggtgc gcgccatgct gacttgcccg ataggggcgg cgtccagctc cgacctgacc
     2221 ggagcattgt gccctaggat tgcgaccaac ccaaggatga catgccgcgc cgttgctaac
     2281 tgttgccaat gggttcgacg aatctttaca ctccatcgat gttatgtatc tgattcataa
     2341 tgcgattcgc actgaggcaa ggcgttgccg acaggccgtc gaacgactcg aagtcggtgg
     2401 gaacttcaaa cccttcatga atgattttta c
//
LOCUS       DASQSL010000923         1591 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_144483, whole genome shotgun sequence.
ACCESSION   DASQSL010000923 DASQSL010000000
VERSION     DASQSL010000923.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1591
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144483"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..327)
                     /locus_tag="VE844_09440"
     CDS             complement(<1..327)
                     /locus_tag="VE844_09440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018497356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase"
                     /protein_id="HZC01566.1"
                     /translation="MAHYRNALPQLTGGLFLTDGGIETTLIFHEGLELPDFAAFHLLR
                     SPKGEAALYKYFRTYAEIAKRFGVGLVLESATWRANADWGMRLGYTPEALADVNRKAI
                     HLLENVR"
     gene            complement(367..951)
                     /locus_tag="VE844_09445"
     CDS             complement(367..951)
                     /locus_tag="VE844_09445"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019180960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZC01567.1"
                     /translation="MSEAVIRTATAADAERCLAALTLAFGSDPPCRWAWPDPHQYLEA
                     FPRFARAFGGSAIALGTAHYSEGFSGVALWLPPGATPDEASLVRVIQDTVADAQQDAM
                     FSMFEQMGAYHPSEPHWHLPLIGVDPARQGRGIGSALQRHVLHHCDRQQLLAYLEATS
                     PRNVRLYERHGFEALGSIQVADSPPVVPMVRTPR"
     gene            complement(1150..>1591)
                     /locus_tag="VE844_09450"
     CDS             complement(1150..>1591)
                     /locus_tag="VE844_09450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013157091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HZC01568.1"
                     /translation="QTGARVSEFVNIKVNEFFFDEQMLLFSKAKGGKSRYVPILPELA
                     QELRTHLGDRAAGYLFETIHHTPYSPRRIQQIIKKTADAAKITKRVYPHLLRHSVATT
                     LLERGMPLEQIQKFLGHAKLETTQMYAESTPEMIKASYQKALAG"
BASE COUNT          308 a          475 c          480 g          328 t
ORIGIN      
        1 ccgcacgttt tcgagcaggt gaatggcttt gcggtttaca tctgcaagcg cctcgggcgt
       61 atagccaagg cgcatccccc aatccgcatt ggcccgccac gtcgcacttt cgaggaccag
      121 gccaacgccg aaccgcttgg caatctctgc ataggtgcgg aagtacttgt acagagccgc
      181 ttcgcctttc ggagagcgca acaggtggaa ggcggcgaag tccggcagct ccaagccttc
      241 gtggaagatc aaggtcgttt cgatgccgcc atcggtcagg aacagaccgc cggtcaactg
      301 cggcaacgcg ttgcggtagt gcgccatgcc ttctgtcctc ctgtcttctc tgtgacttgc
      361 cgtccgttag cgtggtgtgc gcaccatcgg aacaaccggt ggcgaatccg ccacttggat
      421 gctgccgagc gcctcaaatc cgtgccgctc gtataagcga acatttcgcg ggcttgtcgc
      481 ttcaagatag gccaacagct gttggcgatc gcagtgatgc aagacgtgac gctgcagcgc
      541 cgaaccgatt ccccgaccct gacgcgccgg atcgaccccg atgagcggga gatgccagtg
      601 aggttcgcta gggtggtagg cacccatttg ttcgaacatc gagaacatcg catcctgctg
      661 tgcatcggct accgtatcct ggatgaccct taccagggat gcctcatccg gcgtggctcc
      721 cggcggcagc cacaaagcga cgccggaaaa cccctcagaa tagtgagccg ttccaagagc
      781 aatggcgctg ccgccgaagg ctcgcgcaaa gcgcgggaat gcctccaagt actggtgcgg
      841 atcgggccat gcccaacggc aaggcggatc actgccgaaa gccaaagtca gcgcggccaa
      901 acaccgctcc gcatcggccg ctgtcgcagt ccggatcact gcctcagaca tgcttgaata
      961 tctcctgttg tgtcgcccta tcgtctctcc gcaacctcac caatgggtat caggcagatg
     1021 tgccctgata attgataggg ctggggtgtt cgggccgtgt ggcccgacgc cggtgatcag
     1081 caatctcctg ggcaccaccc cggagagacg ctcgatctgc ctcgacgaga aatctcttcg
     1141 tggcacacct cagccggcca gcgctttctg atagctcgcc ttgatcatct cgggcgttga
     1201 ctcggcatac atctgggtgg tttcgagttt ggcgtggccc aggaacttct gaatttgctc
     1261 caagggcatt ccgcgttcca gaagagttgt ggccaccgag tggcgcagga gatgcgggta
     1321 tacgcgtttg gtgatcttgg cggcgtccgc ggtcttcttg atgatctgct ggatgcgacg
     1381 cggtgagtag ggggtgtgat gaatggtttc aaagaggtag cccgcggcgc gatcgccgag
     1441 gtgcgttcgc aattcttggg ccagctccgg gagaatcggc acatagcggc tcttgccgcc
     1501 tttggccttg gagaacaaga gcatctgttc atcaaagaag aactcgttca ccttgatgtt
     1561 cacaaactcc gagacccggg cgccggtctg g
//
LOCUS       DASQSL010000924         1640 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_75730, whole genome shotgun sequence.
ACCESSION   DASQSL010000924 DASQSL010000000
VERSION     DASQSL010000924.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1640)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1640)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1640
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75730"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            83..358
                     /locus_tag="VE844_09455"
                     /pseudo
     CDS             83..358
                     /locus_tag="VE844_09455"
                     /inference="COORDINATES: protein motif:HMM:NF013753.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            703..837
                     /locus_tag="VE844_09460"
                     /pseudo
     CDS             703..837
                     /locus_tag="VE844_09460"
                     /inference="COORDINATES: protein motif:HMM:NF040425.3"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6444 domain-containing protein"
     gene            931..>1640
                     /locus_tag="VE844_09465"
     CDS             931..>1640
                     /locus_tag="VE844_09465"
                     /inference="COORDINATES: protein motif:HMM:NF015038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01569.1"
                     /translation="MPEWCACGSGEFDLIEPYYTHQEIELPRIEMEVTHWVLHQGRCL
                     DCGRWQKAQVRGEHVTGYGPRLSALMAELAGTYGNGRRMVQTFCSSVLGVPISLGAIQ
                     KVVDRVTLAIDPYYTLIAKQARQARINYIDETPWYCENALAWLWVMASEQVAFYMIHP
                     RRSKEAFFDLIEEWAGLLVSDGYGVYQNWVNARQTCLAHLMRTARGLAARQQPELAAC
                     GAWALVELQRLCQMAKAPP"
BASE COUNT          334 a          438 c          509 g          359 t
ORIGIN      
        1 ccccagacag ctgggccgca ccatcgggat tgacgaatat gcccggcgaa agggctaccg
       61 ttataacacc tcaatcgtcg acttggacaa aggtcggccc cttgccacct tcaagggccg
      121 gcgggctaag gatgtcatca cttggttcaa gcgtcgtcca caggccgaac tcaagcgtgt
      181 ggaagtggtg gtgttggata tgtccaagac gtatgccttg gccattcagg agctctttgg
      241 ggagttggtg caagtgattg accgcttcca tgtggtgaag ctggctgttg atgctctgga
      301 tgaggtgttg cgcgccgtgc aaaaacagct tgatccagag gaagccaagg ccctgaagaa
      361 actacgccgc cgctggctca agtcagccca tcagctccat gtggacgagt ggattgcgcg
      421 ttacgagtgg cgcgtacgcg atcacagggt ctcaatctat gccatgctta atctgccagc
      481 gttagatttt aaccctgtcc atggctattt ttcgctggac actgttgccc atctccgcta
      541 taaaaactac cctcatctca atgttgcggc atgcgagctg gatacgtcat ggagacatgg
      601 cctgagttcc cccggacagt ggaatcgttt ccctttacgg cgcagaattg ggctcagacg
      661 ccgtctgctg tgcaagccta tgtgtctacc ctgcacgacg agatggcacg cctgcaccac
      721 gagatcgggc agctccacga gcgcgtcgag acgttggagg cccgattgca gcagaattcc
      781 accacctcat cgaagccgcc atcatcggat tccccttacc agaaacctcg tcgccgcacc
      841 ggctccacgg gctcgcgaaa aggtggtggc aagcccggtc atctggggca tcgccaggtg
      901 cttttagcgc cgaccacggt tgaggagttg atgcccgagt ggtgtgcgtg tgggagcggc
      961 gaatttgatc tgatcgagcc ctactatacg caccaagaaa tcgagctgcc ccggatcgag
     1021 atggaagtga cgcactgggt gctacatcag ggtcggtgtt tggactgtgg gcgttggcag
     1081 aaagcccagg tacggggtga gcatgtgacg ggctatggtc cacgcttgag tgcgctgatg
     1141 gcggagttgg ctgggacgta tggcaatggc cgccgcatgg tgcaaacctt ctgctcgtcg
     1201 gtgctcggcg taccgatcag tttgggtgcc attcagaagg tcgtggatcg agtgacgttg
     1261 gcgatcgatc cctattacac gttgatcgcc aagcaagcgc gtcaggcacg gatcaattac
     1321 atcgatgaaa ccccatggta ttgtgaaaat gccttggcat ggctgtgggt gatggccagt
     1381 gagcaggtgg ccttctacat gatccatcct cggcgttcca aagaagcgtt tttcgacttg
     1441 attgaagaat gggcgggtct attggtgagc gatggttatg gggtgtatca aaactgggtg
     1501 aacgctcggc agacctgcct ggcacatctg atgcgcacag cccgggggtt ggccgcccgc
     1561 cagcaaccgg agcttgccgc atgcggggcc tgggccctgg tggagttgca acggttgtgt
     1621 cagatggcca aagcgccccc
//
LOCUS       DASQSL010000925         1285 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_168153, whole genome shotgun sequence.
ACCESSION   DASQSL010000925 DASQSL010000000
VERSION     DASQSL010000925.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168153"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..177
                     /locus_tag="VE844_09470"
     CDS             1..177
                     /locus_tag="VE844_09470"
                     /inference="COORDINATES: protein motif:HMM:NF013395.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HZC01570.1"
                     /translation="MSEEFQTGNQLYQGNDLDRGHLVRRLDPAWGTLIQAKRAELDTF
                     FSSDARSQSLKESR"
     gene            286..1239
                     /locus_tag="VE844_09475"
     CDS             286..1239
                     /locus_tag="VE844_09475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016298688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01571.1"
                     /translation="MSKASRRPTREARKQHKQKRREAQHELRARQAAAGLKPPRAASI
                     VNRLSPYRTEAEEQAAREEGVAGQLGIFRQLLPRWLKELAEIPDPRLFPFLSYAEGDP
                     DDQKQDCERNAFYRLAERLKAYFPRLPVLLLDGLYPNGPLMALCHHYGWHFMIVLPER
                     CLPSVWEEVEALKPRQPHHRHSQTWRGRQQQFWWVNDITYGYDNARYELVVHVVGCEE
                     TWQAVDPDSGELIDKQARHVWLSSHRLQHDNIPPHCNLAARQRLWYRSQYAGREAPGL
                     LLRACLLPQLECHAGLAFSDALGAPVQCAGARDPACRQTGA"
BASE COUNT          283 a          372 c          383 g          247 t
ORIGIN      
        1 atctccgagg agttccagac tggcaaccag ctgtaccaag gaaacgacct ggatcgcggc
       61 cacttggtgc gtcggttgga ccccgcgtgg gggaccctga tacaagcgaa gcgggccgag
      121 ctggacacgt tcttcagctc tgacgcacgt tcccagagcc tcaaggaaag caggtagcta
      181 gaagtgatcg aaaaaaagtt tgtcgcacaa aagtgaggca ttgacggcca gattatggca
      241 gatttccccc gagtcaatcg gtttatccag agggggaaat ctgccatgag caaagcgagt
      301 cgtcgaccga cacgggaagc ccgtaaacag cataagcaaa agcgccgcga agcacaacat
      361 gagctacgcg cccgccaagc cgcagcgggt cttaagccgc cccgcgcagc gagtattgta
      421 aaccggctga gtccctatcg gacggaggct gaagaacaag cggcgcgcga ggagggggtg
      481 gcggggcaat tagggatatt tcggcagtta ttgccgcggt ggctaaagga gttggcggag
      541 atcccagacc cccgcctatt cccatttctc agttatgctg agggcgatcc ggatgatcag
      601 aaacaagact gcgagcgcaa cgccttctac cgtctggcgg agcggctcaa ggcatacttt
      661 ccacgattac cggtgctgct gcttgatggg ctctatccca atggcccctt gatggcgctc
      721 tgtcaccact acggctggca ctttatgatt gtcttacccg agcggtgctt accctcggtc
      781 tgggaggaag tcgaagccct caaaccgcgc cagcctcacc atcgccatag ccaaacgtgg
      841 cgcggacggc agcagcagtt ttggtgggtc aacgacatca cctatggcta cgataacgct
      901 cgctacgagt tggtggtgca tgtggtgggc tgtgaggaaa cctggcaagc agtcgacccc
      961 gacagcggtg agcttatcga taagcaagcc cgccatgtgt ggctctccag ccaccggctc
     1021 cagcacgaca acattcctcc ccactgtaac ctcgccgctc gccagcggct ttggtatcga
     1081 agtcagtatg caggtcgaga agcgccaggg ttactgctac gagcatgcct tctcccacaa
     1141 ttggaatgcc atgcagggct agcattctct gatgcgcttg gcgcacctgt tcaatgcgct
     1201 ggcgctcgcg acccggcgtg tcgccaaaca ggtgcgtgaa ctcggcgtcc aagcgtttct
     1261 gcgttctgtg cgcgagagct gtgcc
//
LOCUS       DASQSL010000926         1004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_60141, whole genome shotgun sequence.
ACCESSION   DASQSL010000926 DASQSL010000000
VERSION     DASQSL010000926.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60141"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..905
                     /gene="menC"
                     /locus_tag="VE844_09480"
     CDS             <1..905
                     /gene="menC"
                     /locus_tag="VE844_09480"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015248796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HZC01572.1"
                     /translation="QEFIVPAILHQEFSTIANLVAAYSKVRRHNFAKSGIETAFWHLL
                     SQAEGKPLAQLLGGTRTAIESGVSIGIEPDTKYLLKRIEGFLAQSYRRIKLKIGPGQD
                     VEVLRQVRQAFPTIPLMADANSAYTLADLEHLKQLEAFNLLMIEQPLSHDDIIDHATL
                     QRALSTPICLDESIHSAEDARKALDLGSCRIINIKPGRVGGLLEACKIHDLCQARGIP
                     VWCGGMHEYGIGRAHNIALSALPNFSIPGDISASDKYYAEDLIDPPVTVEHGKIDVPQ
                     ALGLGYTPNEERIARFTVEKLTFT"
BASE COUNT          232 a          302 c          264 g          206 t
ORIGIN      
        1 tgcaggaatt catcgtacct gccattctcc atcaggaatt cagcaccatc gccaacctcg
       61 tcgccgcata cagcaaggta cgccgccata attttgccaa atcgggcatc gagactgcct
      121 tctggcatct gctctcgcaa gccgagggga aacctctggc acagctcttg ggcggtacac
      181 gcacggcgat cgagtcgggc gtcagcatcg gcatcgaacc tgataccaaa tacttgctca
      241 aacggatcga gggatttctg gcacagagct atcggcgtat caagttgaag atcggcccag
      301 gccaagatgt cgaagtgcta cgccaggtgc gccaggcttt cccaacgatc ccgctgatgg
      361 ctgatgccaa ctctgcctac acgttggcag atctcgagca tctcaagcaa ctcgaagcct
      421 tcaaccttct gatgatcgaa cagccgctgt cacacgacga tatcatcgac cacgctaccc
      481 tgcaaagggc tctcagcaca cccatttgcc tggacgagag cattcactcg gcggaggatg
      541 cgcgcaaggc gctcgatctc gggagttgtc ggatcatcaa cattaagccg ggccgggtgg
      601 gtggcttgct tgaggcgtgc aagatccatg atctctgtca ggcacgaggg attccggtgt
      661 ggtgtggtgg catgcacgaa tatgggatcg gccgggccca caatatcgca ctcagcgccc
      721 tgccaaattt ttccattccc ggcgatattt ccgccagcga taagtactat gctgaggacc
      781 tcatcgatcc ccccgtgacg gtagaacatg gcaaaatcga cgtcccacaa gcactcggac
      841 ttggctacac gccgaacgaa gagcggattg cacggtttac agtcgagaaa ttgaccttca
      901 cgtaagtgct catgctctcc tcttccagcc ctcaccccct gggactcttc gaagagaagt
      961 gagaaactgt ctgaacaggt caggtcatcg ccagtcgccg gacc
//
LOCUS       DASQSL010000927         3668 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_144502, whole genome shotgun sequence.
ACCESSION   DASQSL010000927 DASQSL010000000
VERSION     DASQSL010000927.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3668
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144502"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            93..1493
                     /locus_tag="VE844_09485"
     CDS             93..1493
                     /locus_tag="VE844_09485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC01573.1"
                     /translation="MLNPIRGIALVQLKSLLRGFLQECSLPFGSVLTVKEVVAIIREE
                     LVETCDRIFTPLVTLCTFLSQIHSDDPSCRAAVARLNAARVGQGLAPCSPLTGGYCKA
                     RKRLPESLLQRLLGLSGQRFEQPVSKTWHWHGRAVKIVDGSGVSMPDTPENQEAYPQP
                     GSQAAGLGFPVARLVVVLSLACGAVLGAALGRIKGKQSGENMLFHSLHEHLERDDVML
                     ADRYYCSYWEVALLLGRGVDVVMRLHQRRPVDFRQGQRLGHEDHVVTWTKPACPDWMD
                     AATYAALPTTIKIRELRIRVIQRGFRTRALVVATTLLNAQEFTREELAGLYRARWHAE
                     LDLRSIKQTLKMDVLRCKTPAMVRKEIWGHLLVYNLLRAAMVQAALSQGVSPRQLSLQ
                     GARQTLEAFRSSLGAASPAERENVIHIVLSAIARHRVGTRPDRYEPRVRKRRPKPYPL
                     MTVPRQQAPERLARAA"
     gene            complement(1616..2440)
                     /locus_tag="VE844_09490"
     CDS             complement(1616..2440)
                     /locus_tag="VE844_09490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008070696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZC01574.1"
                     /translation="MAADPPEPVIEIRDLKTCFGSVCIHENLNLKVRQGETVALVGGS
                     GSGKTTLLREIIMLALPTAGSIKVLGQALSDLSETDADQLRRRMGVMFQHGALFSALT
                     VMENVAVSLREHTDLSERLIRELALLKITLAGLPADAAFKYPRQLSGGMLKRAAVARA
                     IALDPELLFLDEPSAGLDPISANAFDELILQLKESLGLTVVMVTHDIDTLWRVTDRVA
                     FLGEKRVLGLASVQELSEHPHPLIQAYFAGPRGRIAKEHQSVAATARPPAPASSLA"
     gene            complement(2456..3568)
                     /locus_tag="VE844_09495"
     CDS             complement(2456..3568)
                     /locus_tag="VE844_09495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018992494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaE family lipid ABC transporter permease
                     subunit"
                     /protein_id="HZC01575.1"
                     /translation="MPSKLEPRSNPIALELSGRWTTPYLAAIEAKFVHLTYQEGTALE
                     LDASAIIAMDTGGAWLLHQLLTNLAIQGITVHLEGLREEYRELLELIQSRLGTEAETQ
                     DFRKPRLLERLGQRTWTYVDEGIALLAFVGEISVALLRTLKQPSRIRWNALFSTLDHA
                     GVQAIPIISLLSFLLGIVIAYQGGVQLRTYGANIFIVELVSLTMLRELAPMMTAIIVA
                     GRTGSAYTAEIGTMKVTEEIDALRSLGIAPMDILVLPKLLGLIIVLPLLTLVADAMGI
                     AGGIVMAATQLDVGFHDFIDRIPQSDTLEAFLIGIGKAPVFAMIVATVGCFQGFQVTG
                     SADSVGRQTTVSVVHSIFLVIVVDAAFSILFGWMGI"
BASE COUNT          767 a         1067 c         1078 g          756 t
ORIGIN      
        1 gattaattgg tgggataagg tatatacagg ataggcccgc ttatctttta atgagggtgt
       61 atcaccatcc tcaatcgata aggaggccta ccatgttgaa tcctatccga ggcattgctt
      121 tagttcaatt gaagagtctg ctccggggtt tcctgcagga gtgttcctta ccctttggct
      181 ccgtgctgac ggtcaaagag gtggttgcca taatccggga ggaattggtt gagacctgtg
      241 accgtatctt cacccccctg gtgacgctgt gcaccttctt gagccaaatc cacagcgacg
      301 atccctcgtg ccgtgcggcc gtagcccggc ttaatgcggc tcgggtcggg caggggctgg
      361 caccctgttc gccgctcacg ggcggctact gcaaggcccg caaacgcctc ccggagtcgc
      421 tgctgcaacg gctgctgggc ttaagcggac agcgatttga gcagccggta tccaagacct
      481 ggcactggca tgggcgagcg gtcaagatcg tggatggctc gggggtgtcg atgccggata
      541 cgcccgagaa ccaagaggcc tatccccagc ccggcagcca ggctgcgggc ctgggcttcc
      601 ccgttgcccg cctcgtggtg gtgttgtcct tggcctgcgg tgcggtgttg ggcgcggcgc
      661 tcggtcgcat caagggcaag caaagcggtg agaacatgct attccatagc ttgcatgaac
      721 acctggagcg ggacgatgtg atgctggccg accgttatta ctgctcgtac tgggaggtcg
      781 cgttgttgct ggggcggggg gtcgatgtag tgatgcggtt gcatcaacgg cggccggtgg
      841 actttcgcca gggccagcgg ttaggccatg aggaccatgt ggtcacctgg accaaaccgg
      901 cctgccctga ctggatggat gcagccacct atgccgcgtt acccactacc ataaagatac
      961 gggaattgcg gatccgcgtg atacagcggg ggttccgtac ccgcgcgctg gtggtagcga
     1021 cgaccttgct caatgcccaa gaatttaccc gggaggaact ggctgggctg taccgggcgc
     1081 gctggcatgc cgaattggac ttgcgttcga tcaagcagac cttaaagatg gatgtgttgc
     1141 gatgcaagac ccccgcgatg gttcgcaagg agatctgggg ccacctgctg gtctacaacc
     1201 tgctccgcgc agccatggtg caggcggccc tgagtcaggg ggtgtcgcca cggcagttga
     1261 gcctacaagg ggcgcgccag accctcgaag cctttcgcag ctcgttgggt gcggcctccc
     1321 ctgccgagcg ggagaatgtc attcacattg tgctgagcgc aatcgcccgg catcgggtgg
     1381 ggacccgccc ggatcgctat gaaccgcggg tgcgcaagcg tcgccccaaa ccgtatcccc
     1441 tgatgactgt gccgcgccaa caagcccccg agcgattggc aagggccgct tgagactcag
     1501 gaagtgccat tcgggtcaga ccccttttca ctttgaccct tttcactttg acccttttca
     1561 ctttcttttc acttttggat tcaccggctg ctgccagtgc tgcaacggac cctggctaag
     1621 cgagagagga cgccggagcg ggagggcgag cagtggcggc aactgactgg tgctccttgg
     1681 cgatgcgccc gcggggtccg gcaaaatagg cttggatcag aggatgggga tgctcactga
     1741 gctcctgcac actggcaagg cctaataccc gtttttcacc gagaaaggcc actcgatccg
     1801 tcacccgcca cagggtatcg atatcgtggg tcaccatcac caccgtaagt cccaacgatt
     1861 ctttgagctg caggatcaat tcatcgaatg cattggcgct gatgggatcc aagcctgcgc
     1921 tgggttcatc gagaaacagc agctcaggat ccagcgctat cgcccgggcc accgccgccc
     1981 gtttaagcat gccgccactg agctggcggg gatacttaaa cgccgcatcc gccggcaggc
     2041 cagcgagcgt gatctttaac agcgccaatt cccggatcaa ccgttctgag agatcggtat
     2101 gttcccgcaa ggaaacagct acattttcca tcaccgtcag tgcgctaaac agggctccgt
     2161 gctgaaacat cacccccatc cggcgccgca attgatcggc gtcggtctca ctcaaatcgc
     2221 tcagcgcttg ccccaagacc ttaatagagc cggccgtggg cagcgccagc atgatgatct
     2281 cccgcagcaa ggtcgtcttg cccgatccgc tcccaccgac cagggccacc gtctcaccct
     2341 ggcgtacctt aaggttgagg ttctcatgga tgcagacgga gccaaaacag gttttgagat
     2401 cgcggatctc gatcaccggc tcggggggat cagcggccat aaatctactc aagattcaga
     2461 tccccatcca gccaaacaag atcgagaagg cggcatcgac gacgatcacg agaaagatcg
     2521 agtgtaccac gctgaccgtg gtctggcggc cgacactgtc ggcgcttccg gtgacctgga
     2581 aaccctgaaa acagcccaca gtcgctacga tcatcgcgaa tacgggggcc ttgccgatcc
     2641 ctatcaaaaa tgcctcgagc gtgtccgatt gggggatccg atcgataaag tcgtgaaaac
     2701 ctacgtcaag ctgggtcgcc gccatcacta tgccgccggc tatccccatg gcatcggcaa
     2761 ctagagtgag taaaggtagc acgattatca agccgagcaa cttaggcaat accagtatat
     2821 ccatcggtgc gatcccaagg gagcgaagtg cgtcgatctc ctcggtcacc ttcatggttc
     2881 cgatctcggc ggtatacgcc gagccggtgc ggccggcgac aatgatcgcc gtcatcatcg
     2941 gcgcaagctc acggagcata gtgaggctga ccagttccac aatgaatata ttggccccat
     3001 aggtacgcag ttgaacccca ccctgatagg cgatcacgat gcccaagaga aaggagagca
     3061 ggctaatgat agggatcgcc tggacaccgg catgatccag cgtgctgaac aaggcgttcc
     3121 agcggatcct ggagggttgt ttgagggtgc gtaataaagc gacagagatc tcacccacga
     3181 aggccagcag agcgatccct tcatccacat aggtccaggt ccgttgcccc agtcgttcga
     3241 gcaagcgcgg tttccggaag tcctgtgtct ccgcttcggt tccaagccgg ctttggatta
     3301 attcgagcag ttcacggtac tcttcacgca gcccctcgag atgtaccgta atgccttgaa
     3361 tcgcgaggtt cgtcaacagc tgatgcagca accacgcgcc tcccgtatcc atcgcgataa
     3421 tggcgctggc atcgagctct agtgctgtcc cttcttggta agtcaaatga acaaatttag
     3481 cttcgatcgc ggcaagataa ggcgtcgtcc aacgcccact gagctccagt gcgattggat
     3541 tggaccgagg ctcgagctta ctaggcatgg gtttattcta tatcctctcg tatgccggcc
     3601 gttgctgttt atagcccgaa agtcggctgt tcaggataca gatatacata gcaagtagcc
     3661 tgggtaaa
//
LOCUS       DASQSL010000928         1691 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_113248, whole genome shotgun sequence.
ACCESSION   DASQSL010000928 DASQSL010000000
VERSION     DASQSL010000928.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1691
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113248"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1199
                     /locus_tag="VE844_09500"
     CDS             <1..1199
                     /locus_tag="VE844_09500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="DDE transposase family protein"
                     /protein_id="HZC01576.1"
                     /translation="VLQMASRREANRELSRPAFLATLQALFPELESLPHADTLHRLLQ
                     EIDVQFLEDTHVGLLRRWSRNKKFRRYLISQCYPIAIDGTQKLVRCGQWVGEEWLERR
                     RQTADGEQVQQYVYVLEANLVFYNGLSLPLLSEFLSYIEGDPDDHKQDCELKAFYRLA
                     ARIKAYFPRLPILLLLDGLYPNGPLMALCHQYQWQFMIVLPDKCLASVWEEVEALKPR
                     LPHHRKHQHWHGRQQQFWWVNDITYSYEGDRKSLLVHGVGCEETWQEIDPESGELVDK
                     QTQHVGLSSQRLDPYNVHERCNLGARQRWGIETSLLVEKCHGYHYKHAFSYTWNAMKG
                     YHYLMRLAHLLNALALATKRVASHVRTLGVQAFLRWVRESCAHRWLRREWIEHFRATP
                     WQLRLE"
     gene            1346..1522
                     /locus_tag="VE844_09505"
     CDS             1346..1522
                     /locus_tag="VE844_09505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01577.1"
                     /translation="MKHAKGQRAARPHGEKRKLGQLMRQGCLSPEGFRWRMMPSIVSV
                     LLGFKVRRLDDYKA"
BASE COUNT          362 a          478 c          496 g          355 t
ORIGIN      
        1 ttgtgttgca gatggcctcg cggcgcgagg ccaaccggga gttgagccgc ccggcgtttc
       61 tggccacctt gcaggcattg tttccggagc tggaatcgct accgcatgcc gacacgctgc
      121 atcggctgtt gcaggagatc gatgtccagt tcttggaaga tacgcatgtg ggactgctac
      181 ggcgctggag ccgcaacaag aaattccgtc gctacttgat cagccagtgc tatccgattg
      241 ccatcgatgg gacgcagaag ttagtgcgct gcggtcagtg ggtgggcgaa gaatggttag
      301 aacgccgccg ccagacggcc gatggcgagc aggtgcaaca gtatgtttat gtgctagaag
      361 cgaatcttgt cttttataat ggcctgagct taccgttgct gagtgagttt ctcagctaca
      421 ttgagggcga tccggacgat cataaacaag actgtgagtt gaaagccttt taccggctgg
      481 ccgcgcggat caaggcctac tttccacgcc taccgatcct gctgttactt gatgggctct
      541 atcccaatgg tccgctgatg gcgctatgtc accagtatca gtggcagttt atgattgtgc
      601 tgcccgataa atgcttagcc tcggtgtggg aggaggtcga agcactcaag ccacgcctgc
      661 cccatcaccg caaacaccag cactggcacg ggcgtcagca acagttctgg tgggtcaacg
      721 acatcaccta tagctatgag ggggaccgca aaagcctcct ggtgcatgga gtcggctgtg
      781 aagaaacctg gcaagagatc gaccctgaga gtggcgagct tgtcgataag cagacccagc
      841 acgtggggct gtccagccag cgcctggacc cctacaacgt ccacgagcgc tgtaaccttg
      901 gcgcccgcca gcgttggggt atcgagacca gcctcctggt cgaaaagtgc cacggctacc
      961 actacaagca tgccttctcg tatacctgga acgcgatgaa gggctaccac tacctgatgc
     1021 gcttggcgca tctcctcaat gccctggcac tggccaccaa acgggtggcg agccacgtgc
     1081 gcacactggg cgtacaggcg tttttgcgct gggtgcgcga gagttgcgcg catcgctggc
     1141 tacggcgtga gtggatagaa cactttcggg ccacgccctg gcagttgcga ctcgaatagt
     1201 cgcctcacct gcgcaccgcc ctaaccgcca ccgaggtcgt cgaaacgggt ctcggcaggg
     1261 gccctttgcg ccgcggaagt cgtggcattg gaaaaatggg cttcagtgcc ttggctactc
     1321 ctcttatctg ggcggctact agcgcttgaa acacgccaaa gggcagcggg cggcacgtcc
     1381 ccatggggaa aaaagaaaat taggccaact catgcgtcag ggctgcctgt cgccagaagg
     1441 ttttcgttgg cgtatgatgc ccagtatcgt ctcggtgctc ctcggcttta aagtacgacg
     1501 gttggacgac tacaaggcct agagccagtt cccaatcaat acaaacccgg cccaatagaa
     1561 cggatgctga tactcaacgt cggtcaacag cagtttcgga aggcggtcaa tgtctgccgc
     1621 agctcggcgg cattgaccgc tacatcgacc tcagcaattc ccggcctctg gtaaataatc
     1681 ttattattca a
//
LOCUS       DASQSL010000929         1556 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_184627, whole genome shotgun sequence.
ACCESSION   DASQSL010000929 DASQSL010000000
VERSION     DASQSL010000929.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1556
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184627"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            165..>1556
                     /locus_tag="VE844_09510"
     CDS             165..>1556
                     /locus_tag="VE844_09510"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SagB/ThcOx family dehydrogenase"
                     /protein_id="HZC01578.1"
                     /translation="MEPNDSLEDPISQVIAYHERTKHHFHRYALGPGQLDWATQPDPF
                     RRYRGDPLLPLDHIAPSESPLYDEAFTDHRIPPVLLNRRSISQLFYDNLALSAWKQAG
                     TARWALRVNPSSGNLHPTEGYLLCGAIPGLSDSPFLAHYAPKEHALEIHAHIPATLWQ
                     RLLPGLLGESVLVGLSSIHWREAWKYGERAYRYCHQDAGHALAALSIAAAGLGWKASL
                     LDDLGTEDLRILLGLNESQGPEVEHPDCLIVIGPEISPKIELNRTLLLQFKELEKQGV
                     PNILSPAHRLWEIIDDVARMAEKSSTVSVYGYSTNGLVTCPDDNTLLHPDVKLRPIIH
                     QRRSAVAMDSRTAITRETFYKMLYRTLPDPACAPFHTLPWPPKVHLAIFVHRVKDLAP
                     GLYLLIRDRARLPALKEVIRTDFDWVEAPAVPLGLALFQLAFGDVRTLAQAVSCHQEI
                     AADGCFSLGMIARF"
BASE COUNT          339 a          473 c          407 g          337 t
ORIGIN      
        1 ggccgaatcc atcacctgac caggttagtg gcacgtgacg cccaggccgt caggagctta
       61 agagtctgat tattcgtaca atacgtttag cgtagaaatt tgcgccgatg ctgccaaaac
      121 gcctaatacc actatacagc aggcaacgat atactcggca agatatggaa ccgaatgatt
      181 cattagaaga ccctataagt caggtaatcg cctatcacga gcggactaag caccacttcc
      241 atcgatatgc cctgggccca gggcagctgg actgggcgac ccagccggac ccgttccggc
      301 gttatcgtgg agatccccta ctacctcttg accacatcgc ccctagtgag agccccctct
      361 acgatgaggc ctttaccgac caccggatcc cacccgtact gctcaaccgt cgcagtatat
      421 cgcagctctt ttacgacaac ctggcgctct ccgcctggaa acaggcgggc accgctcggt
      481 gggcattgcg cgtgaatccc tcaagcggca acttgcaccc caccgagggc tatctcctgt
      541 gtggtgcgat tccagggctc tccgatagcc cgttcctggc tcactatgcc cccaaggagc
      601 atgcccttga gatacacgca catatacccg ccacgctatg gcaacgcctt ctgcctggac
      661 tgctgggcga gtcggtgctg gtggggcttt cctccatcca ctggcgcgag gcctggaaat
      721 atggtgaacg cgcctatcgc tactgccatc aagatgctgg acacgcgctt gcagccctca
      781 gcatcgctgc ggccgggctt ggctggaaag caagcctgct ggatgacctt ggcactgagg
      841 atctacgcat actgcttgga ttgaatgaat cccaagggcc cgaggtcgaa catcctgact
      901 gcctcatcgt tattggcccc gagatcagcc ccaagataga acttaaccgc acgctgctcc
      961 tacaattcaa agaacttgaa aagcaggggg tccccaatat actgagtccc gcgcaccggc
     1021 tgtgggagat tatcgacgac gtggcaagaa tggccgaaaa atcgtcaacc gtaagcgtct
     1081 acggctattc cacaaatggc ttagttacgt gccccgatga taatacactc cttcacccgg
     1141 atgtgaagtt gcggcctatt atccatcaac gccgaagcgc cgtggctatg gatagccgca
     1201 ctgcgatcac gcgtgagacg ttttacaaga tgctctaccg aaccttacca gatcctgcct
     1261 gtgcgccttt ccacaccctg ccctggcctc cgaaggtgca cctcgcgatc ttcgtccata
     1321 gggtaaagga tttggcgcca gggctgtatc tccttatacg ggatcgggcg cggctaccag
     1381 cgctcaaaga ggtgataagg actgactttg attgggttga ggcgcctgcc gtgccactgg
     1441 gcttagccct atttcaactc gctttcgggg atgtccgcac tctggcgcag gccgtctcct
     1501 gtcatcagga gatcgcagca gatggctgtt ttagcttagg gatgatcgct cgcttt
//
LOCUS       DASQSL010000930         1859 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_144518, whole genome shotgun sequence.
ACCESSION   DASQSL010000930 DASQSL010000000
VERSION     DASQSL010000930.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1859
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144518"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..392
                     /locus_tag="VE844_09515"
     CDS             <1..392
                     /locus_tag="VE844_09515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01579.1"
                     /translation="LKTQGWTDTQIAKELNIGRQTLVNHLRSRASVHPGTPETTEVIE
                     VPQDIPGHPGTLEGYQEVIEDIQQSVPEVAPLVTDKGHPYILDVRHVALIDRYAQEHH
                     LDVKEVMFLALEEFFQRCGYLNESDTR"
     gene            complement(520..756)
                     /locus_tag="VE844_09520"
     CDS             complement(520..756)
                     /locus_tag="VE844_09520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01580.1"
                     /translation="MAEKSVVRRPQDIDAVINRGGSSAASQEDNQEQERVFNLRVPES
                     LVKAVDALRKRRTGKISRNTWILEAIDDKIQRES"
     gene            complement(794..1444)
                     /locus_tag="VE844_09525"
     CDS             complement(794..1444)
                     /locus_tag="VE844_09525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015146133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZC01581.1"
                     /translation="MILVCGGIKGGSGKTTIATNLAAMRAGAGKDVLLVDADEQESAT
                     IFTAIRKRDQSDRPQYTSIILRESQVRAEIERMRTKYDDVIVDTGGRDTRAQRASLSL
                     ADVLLLPFNPRSLDIWTIENVEKLLEDMRTVNPELRAVSFLNRADPVGSDNQDSREIL
                     SAVAGIEFAGLTIVNRKAFGKAVALGLSVTELSKPDEKASREIVALYEHLFSVKVG"
BASE COUNT          441 a          553 c          455 g          410 t
ORIGIN      
        1 atcttaagac ccaagggtgg actgacaccc agatcgctaa agagctgaat atcggccgcc
       61 aaaccctagt taaccatctc cgctcgcgtg cgtcggtaca cccaggaaca ccagaaacca
      121 ccgaagtcat agaggtaccc caagatatcc caggacaccc aggtacactc gaagggtacc
      181 aagaggtgat agaggatata cagcaaagcg tcccggaggt agcccctctc gtcaccgaca
      241 aaggacaccc ctacatactt gacgtgcggc atgtcgctct aatcgatcgg tacgcccagg
      301 aacaccacct tgacgtgaaa gaggtgatgt tcctggctct agaagagttc tttcagcgct
      361 gcggctacct caatgaatca gacacaagat aggtagtgcg ctcgatgtaa tgctcgctgg
      421 caatagcggc ttcgcaactc attgaaaata aatgatgttc atatggggtt ttggagcaaa
      481 agcattacat ggagagcact accaaaaggc aaccagctct cacgactccc gctgaatctt
      541 gtcgtcaatc gcctccagaa tccaggtatt gcgcgaaatc ttgcccgttc gccgtttgcg
      601 cagcgcatcc accgccttca caagcgactc aggcacccgc aggttaaaca cccgctcctg
      661 ttcctggttg tcctcctgcg aggccgcaga agacccgccc cggttaatca ccgcgtcgat
      721 gtcttgggga cgtcgtacaa cagatttctc ggccatctca ccactccatt ttcataccaa
      781 aatagctctc ttttcatccc actttgacgc taaaaaggtg ctcatacagc gccacgatct
      841 cacggctggc tttctcatcg ggtttgctca gctctgtgac cgagagtccc agggcgacgg
      901 ccttgccaaa agcttttcga ttcacaatgg tgagccccgc aaactcgatg cccgccaccg
      961 cagaaagaat ctctcgcgag tcttgattgt ctgagccaac cggatcggcc cggttgagga
     1021 agctcaccgc ccgaagctcc gggttaactg ttcgcatgtc ctccaagagc ttctcgacat
     1081 tttcaatcgt ccagatatca agactcctgg ggttaaacgg caacagcagc acatcggcaa
     1141 gcgagagact cgcccgttgc gcccgggtat ctcgcccgcc ggtatccaca atgacgtcat
     1201 catattttgt gcgcatccgc tcaatctctg cgcgtacctg gctctcccgg aggatgatcg
     1261 atgtatactg cggccggtcg ctctgatcgc gcttgcgtat agcagtgaat atggtcgcac
     1321 tctcctgctc atccgcatca accagcagca cgtccttccc tgccccggca cgcatggccg
     1381 caaggttggt cgcgattgtg gtcttgccac tgccgccttt aatcccacca cagaccagta
     1441 tcattatggc gctacctcca taccagagaa gcacgaaaac ggctctaaag tagcgttagt
     1501 gtagtgcggt aatggcgcta ttacaagaga aatatttcgc tgataggatt agcacacacg
     1561 agaaccgaga actgcgcttg ccccagattc ttacttcgcc ataaggaggt gcgagcaatc
     1621 gctcgtcctc gaggcaattt taggtgtagg atgggagttt tccgcgcttc tggagggatt
     1681 tggtcccctt tgacggccat ctggaaggag ggtactgtca aattaggcgg gtagcctgta
     1741 ccgtccgagg ccggtatggc atactcatgg tatgaaccca cgacctgcca tcaatccata
     1801 caagcgtcat cgattccccg cggagatcat cagccacagc gtgtggctat actaccgtt
//
LOCUS       DASQSL010000931         1209 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_195893, whole genome shotgun sequence.
ACCESSION   DASQSL010000931 DASQSL010000000
VERSION     DASQSL010000931.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1209
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195893"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(342..1007)
                     /gene="nth"
                     /locus_tag="VE844_09530"
     CDS             complement(342..1007)
                     /gene="nth"
                     /locus_tag="VE844_09530"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019140235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0140078 - class I DNA-(apurinic or
                     apyrimidinic site) endonuclease activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HZC01582.1"
                     /translation="MAKRLFDIDLALSRIGDAVRPLPKAALFELADEGFRSPFEQLVA
                     CIISIRTYDEVTLPTARRLFALARTPAELSRLTPAQIDEQIGTCTFHEAKARQIHQIA
                     YKVVAEYGGTLPCDPAVLLSFHGVGPKCAHLVLGIACGQPYIAVDIHVHRVTNRWGYV
                     HTRTPVQTTTALEATLPPRYWIEINRFLVPFGKHICRGSLPHCSTCPVLDMCRQVGVK
                     AHR"
BASE COUNT          288 a          332 c          353 g          236 t
ORIGIN      
        1 caaactagcc tcagaaaacc ttcatctgtc gctgaagtag cctcccccac atacccaccc
       61 cgtggctacg gggggtggtg tactttcatg cacatttttc agaaaaactc aaacatttac
      121 accgccaaat ttacaccgcc gataaggcgg acgccgaccg ctggctccac ctccccgcaa
      181 ccgcctgacc aggcagccgc ccatgggaca ggtgccgggg gggacaggtg acgcggcgaa
      241 aaaatatgct ttatctttcc tattcgctgc agtaggaagt ctatgttctc actatgccct
      301 gatacaggca atgtgtcagt cgcagtgcgc tgacgtgacc ttcaacgatg agcttttaca
      361 ccgacttggc ggcacatatc gagcaccggg caggtcgaac agtgggggag actgcccctg
      421 cagatatgct tgccgaacgg gaccaggaag cgattgattt ctatccagta gcgaggcggc
      481 agggtggctt cgagcgccgt cgtcgtctgt accggtgtcc gcgtgtgaac gtaaccccag
      541 cgattggtga cacggtggac atggatatcc acggcaatgt agggctggcc acacgcaatg
      601 ccgagcacga ggtgggcaca tttcggacca acaccgtgga acgatagtaa aacggcagga
      661 tcgcagggta gggtcccacc gtattccgca acgactttgt atgcgatctg atggatctgc
      721 cgcgccttgg cttcgtgaaa cgtgcaggtg ccgatctgct catcgatctg ggcgggtgtc
      781 agacggctca gctcggcggg cgtacgggcg agggcgaaca gccggcgcgc ggtcggcaag
      841 gtcacctcgt catacgtgcg gattgagatg atacaggcga cgagctgctc aaacggcgag
      901 cggaacccct catcagccag ctcaaacagc gccgcctttg gcagggggcg aaccgcatcg
      961 ccgatgcgag agagcgcgag atcaatatca aacaaccgct tcgccaagag gagagagtcc
     1021 ctttttgtca ggcgtgctca caggtgctgt tcagcacgag cctggagaaa ttgtacacta
     1081 ttgccgcgtg agataatgcc ttggcgagtg gtaatgtaaa gcgatttgat cggtccctaa
     1141 aatagaattt aacaacgcat gaaagataac agtaaaccga gaagtattct gatcacaggg
     1201 gcctcaagc
//
LOCUS       DASQSL010000932         2501 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_87807, whole genome shotgun sequence.
ACCESSION   DASQSL010000932 DASQSL010000000
VERSION     DASQSL010000932.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2501
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87807"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..525
                     /locus_tag="VE844_09535"
     CDS             <1..525
                     /locus_tag="VE844_09535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly(3-hydroxybutyrate) depolymerase"
                     /protein_id="HZC01583.1"
                     /translation="TDNSDDVTCAVTAPPFINDCDFIQAHEILKHIYGNLDPPADTLS
                     CKIIKFNQREFIDSDRSSMSAIAYAYVPKSCETETCRVHVAFHGCEQGAAKIGDIYYT
                     TTGYNELADTNTLIVLYPQVEPSDPIPYNPKGCWDFWGYSSPDQMYPNFYSKQAPQMA
                     AVMGMLKRLAEPRN"
     gene            559..1140
                     /locus_tag="VE844_09540"
     CDS             559..1140
                     /locus_tag="VE844_09540"
                     /inference="COORDINATES: protein motif:HMM:NF020918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin family protein"
                     /protein_id="HZC01584.1"
                     /translation="MQRALFKPWYDLNQFSLSFYKESSQSQTAVLNDLIKIQWGPASW
                     AKLAQASMGSFRAWSEANESTFNRVWQTQLSKLDLGDSAAALRELNEITMSFVTTLLQ
                     NQVNGTSLFVEAWAKYLESLKQAKSVEDAIAVQAHFFSDTHEKLKTNSLETLQTLGSV
                     RAALTAWTEKTIDNAAEEESVLQAVASKRAASK"
     gene            1432..>2501
                     /locus_tag="VE844_09545"
     CDS             1432..>2501
                     /locus_tag="VE844_09545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01585.1"
                     /translation="MSHKRKRRKHRSAQAGQPAVLSPQAMAHKAQAELTAGHYREAIE
                     LFKALLKQEPRPEWVDALAQAYQGRAVGLADKGMFKEAIVFWQNRTELCHRPLAEPFY
                     FCLLFQTGRVAEAVRLFREQQALLETGGSLMELRVQFAAQALAGRAEVTAGLAPEDPV
                     VVDYPAAIAAVQAYCRSDDAALEAQLQRIPFRSPYRDLRQALKALSLQERGDPKGALQ
                     LLDRIPSTSPFAALGTAARAAMGSGPARYQQLQRLGPEARRFAAALQGWSSVQLAFCQ
                     ELMQLGETPEPEGLLRLLLRHRQILGDAYVQKAAMSILVVHSASRHAYAKAFGALSPF
                     HSSRIEALRAEKRQDPYILYES"
BASE COUNT          567 a          730 c          697 g          507 t
ORIGIN      
        1 accgacaaca gcgacgacgt cacctgtgcg gtcactgcgc caccctttat taacgactgt
       61 gactttatcc aagcgcacga gatcttgaag catatctacg gcaatctgga tccgccggcc
      121 gacaccctga gctgcaagat cattaaattc aatcaacggg aattcatcga ttcagaccgt
      181 tccagcatga gcgcgatcgc ttatgcctat gtacccaaat cctgtgagac agagacctgc
      241 cgggtgcatg tggcctttca cggctgtgag caaggggcgg cgaagatcgg cgatatatac
      301 tacaccacca caggctataa cgagttggcc gataccaaca ccctcatcgt gttatatccg
      361 caagtcgagc cctccgatcc cattccctac aatcccaagg gctgttggga tttctggggt
      421 tattccagtc ctgatcaaat gtatcctaac ttttattcca aacaagctcc acagatggcg
      481 gcagtcatgg ggatgctcaa gcgtttggct gagccaagaa actagtcaat ggataaaatt
      541 tattttggag gaaacatcat gcaacgggcg ctttttaaac catggtacga tctcaatcaa
      601 ttctcactga gcttttataa agaaagcagt caatcccaaa cggcggttct caacgatttg
      661 ataaagatcc aatggggtcc ggcgagttgg gcaaagctcg cccaagcgtc aatgggatct
      721 tttagggcat ggtctgaagc taatgagtct acgttcaata gggtctggca aacccaactg
      781 agcaagctgg acctgggcga ctccgccgcg gctttgagag aattgaacga gatcacgatg
      841 tcctttgtta ccacgctgct acaaaaccag gtaaatggga cgagcctttt cgtggaggcc
      901 tgggccaagt acttggaatc cttaaaacaa gctaagagcg tggaagacgc gatcgccgtg
      961 caggcccatt tctttagtga tactcacgaa aagttgaaga ccaactcact tgagaccctc
     1021 caaaccttgg gatcggtcag agccgcattg accgcgtgga ccgaaaagac gatagataac
     1081 gcggctgagg aagaaagcgt gctccaagcg gtcgcttcaa agcgcgcggc aagcaagtaa
     1141 gcttcataac ctccgtctca cctatgtaaa cagatccgtc cccccctcgg gcacgctccg
     1201 cctcggccgg tagaaggcag ggaggagagc gtggatagcc cgtgcggcat acctagtttc
     1261 caggctctgc ctccgatacc ccctagcgtc tcttctgcag aaactgtctg ataggtagtc
     1321 gaaaccccaa acgctgcgta taatataatg acgatcttat cagggagtcg aggtgtgagt
     1381 gcccgggcaa accacacgga gtgggccgcg gcacgttcag cgagtgtaac catgtcacat
     1441 aaacgcaaaa ggcgtaagca tcgctctgcc caagctgggc agccggccgt gctgtcccca
     1501 caagctatgg cgcacaaggc ccaagcggaa ctcacggctg gacattaccg ggaggccatc
     1561 gagttattca aggcgctgct caagcaagag ccgcgtcccg aatgggtcga tgccctggcg
     1621 caggcttatc aggggcgcgc tgtggggctc gcggacaagg gtatgttcaa ggaggccatc
     1681 gttttctggc agaaccgcac tgagctctgt caccgcccgt tggccgagcc tttctatttc
     1741 tgcttgttgt ttcaaaccgg ccgcgttgca gaagcagtgc ggctgttccg cgagcagcag
     1801 gcgttgcttg aaaccggcgg gagcctgatg gaactgcgcg tgcagtttgc ggcccaggcc
     1861 ctggccgggc gcgccgaggt gacagcgggc ctggctccag aggacccggt ggtggtagac
     1921 tatccggcag ctatagcggc cgtgcaggcg tattgtcgca gcgatgacgc ggcgctcgag
     1981 gcgcaactcc aacgcatccc attccgctcg ccctatcggg acctgcgcca ggcgctgaag
     2041 gccctgtccc tgcaggagcg cggtgacccc aagggcgccc tccaactcct ggatcggatc
     2101 cccagtacct cccccttcgc cgctttggga acagcggcac gcgcggcgat ggggtccggc
     2161 cccgcccgct accagcaact gcagcggctc ggccccgagg cacgccgttt cgccgccgcc
     2221 ttacagggct ggtcatccgt gcagctcgca ttctgtcagg agcttatgca gctgggagaa
     2281 accccggaac ccgagggatt attgcgtttg ttgctccgcc atcgccaaat cttgggcgat
     2341 gcctatgtgc aaaaagccgc catgagcata cttgtggtcc attcggccag ccgccatgcc
     2401 tacgccaagg ccttcggcgc cctctcaccg tttcactcaa gccgtattga ggccctgcgg
     2461 gcggaaaaga ggcaggatcc ctatatcctc tatgagagct g
//
LOCUS       DASQSL010000933         2234 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_184655, whole genome shotgun sequence.
ACCESSION   DASQSL010000933 DASQSL010000000
VERSION     DASQSL010000933.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2234
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184655"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(375..548)
                     /locus_tag="VE844_09550"
     CDS             complement(375..548)
                     /locus_tag="VE844_09550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01586.1"
                     /translation="MKKLLQSWVGGEVAYDRLHRAGMQVKALGDVAGRAVLQKVSPTD
                     FEAPMDRGGRLLE"
     gene            686..2089
                     /locus_tag="VE844_09555"
     CDS             686..2089
                     /locus_tag="VE844_09555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01587.1"
                     /translation="MATLLREQGFSRLPVRSPGPRPGARARDGSEVPKVADVCALSLA
                     PSRQLATPTAGLFLFMPLLLEARFSQAVASAGYPGTHQIPAVQAMLALLAPKLLGKRR
                     VSHVSDLGMDEGAGLFAGLNVLPKTTYATDYSYRTERAMNERLVDELVACLPLDAPPL
                     AFNLDFHAIPFRGERSELQNHWVPKRHRAQPAVMALVVQEASRRVLCYATANVLRSDA
                     DRMVVKFADHWQARTGHYPSCLLFDSRATTYAQLWQLTRRGVGFITIRRRGAAMLRRV
                     RSMPTSQWQQCQITQAKGKRRTVKYLEETVRLASYDGTVRQIVFEGLGHAAPTFVLTN
                     DLPERLTARQVIETYARRNHIEHALGEKITFFHLDCLASEVRLNVDFDLTLTVVAALL
                     YRRLAERLKGFAEATPQTLFRKFVNTPGWIVITPHTIEVWFAKRAHNPILKEAGFDRL
                     TDPVPWLQQKPVHLLFP"
BASE COUNT          457 a          656 c          613 g          508 t
ORIGIN      
        1 cgagtcaacg taatccactg catttctatc ccgaccgcca tttcgtccga ttcaagcagc
       61 taatatcgcc gattttcgcg gtcttctaac tcttctaaac agaacttatt tttttgatgt
      121 cctgtcttat tttctatggg ccttgaccta agtttgattt acctctataa gtaataataa
      181 aagtaatcaa tagataggat gagcaacgtt accaatctac gccctgacgg cgtagttata
      241 tgggaagcca gttgttttag ggcgaatagg gccgcatggc caatggcagt tctttgcata
      301 aaatgacgaa atagcccaaa actactttaa ttcgcacttg ctaccctatg gctcgatctg
      361 acgaactggt gcgcttattc gagcagcctg ccgccgcggt ccatcggcgc ttcgaagtct
      421 gtcgggctta ctttctggag cactgctctg cccgcgacat cgcccaacgc tttgacctgc
      481 atcccggcac ggtgcaagcg atcgtacgcg acttcgccac caacccagct ctggagcagt
      541 tttttcaaat gccccgtccc gggcgcaaaa ccgcacccaa gcgccaagcg gtcagtgagc
      601 gcgcggcggc gctgaggcgc cagggcaaga gcttgggcga gattcagcga cagctcgcta
      661 aggacacctg ctatccgaat cgtatttggc gacgctgctg cgcgagcagg gcttttcccg
      721 cctacccgtg cgcagtccgg gcccccggcc gggtgcacgg gcacgggatg gttccgaggt
      781 gcccaaggtg gctgacgtgt gcgccctgtc gctggcaccg agccgccagc tggccacacc
      841 gacggcgggg ttgtttttgt ttatgcccct gctgctggag gctcgctttt cgcaagcggt
      901 agccagcgca ggctatccgg gtacgcacca gatcccggct gtacaggcga tgctggcgtt
      961 gttggcaccg aagctgttag gtaagcgccg ggtcagtcat gtcagcgacc taggtatgga
     1021 cgaaggggcg ggcttattcg ccggtttgaa tgtgttgcct aaaacgacct acgcgaccga
     1081 ctattcctat cgcaccgaac gcgcgatgaa cgagcggctg gtcgatgagt tggttgcctg
     1141 tctaccttta gacgcgccgc cgctcgcgtt taacttggat ttccacgcca ttccatttcg
     1201 cggtgagcgc agcgaactgc aaaaccactg ggtgccgaag cgccaccgcg cccagccggc
     1261 ggtgatggcc ttggtggtcc aggaggctag ccggcgggtg ctgtgctatg ccaccgcgaa
     1321 cgtgctgcgc agcgacgccg atcggatggt agtgaaattt gccgaccact ggcaggcacg
     1381 tactggccac tatcccagct gcctgctgtt tgactcgcgg gcgacgacct acgcccaact
     1441 gtggcagttg acccgccgtg gagtgggctt tatcactatc cgacgccggg gtgcggccat
     1501 gctccggcgc gtacgttcca tgccgaccag ccagtggcaa cagtgccaga tcacccaagc
     1561 caaaggcaaa cgtcggactg tgaaatacct agaagagacg gtgcgcttag ccagctacga
     1621 cggcacggtg cgtcagattg tattcgaggg tttaggtcat gctgctccca ccttcgtctt
     1681 gactaacgat ttgccggagc ggctcacggc gcgccaagtg attgaaacct acgcccggcg
     1741 caaccacatc gagcatgcct taggcgagaa gattaccttc tttcacctcg attgcttggc
     1801 cagcgaggtg cgccttaacg tggactttga tctcacctta acggtggtgg cggccttgct
     1861 ctatcggcgc ttggccgaac gcttgaaagg ctttgctgag gctacgccgc agacgttgtt
     1921 ccgcaagttc gttaatacac ccggttggat tgtgatcacg cctcacacca tcgaagtatg
     1981 gtttgccaaa cgtgctcata atccgattct caaagaggca ggctttgacc ggcttaccga
     2041 cccggtccca tggctccagc aaaagccagt tcacctccta ttcccatgaa attaggtgtt
     2101 aattcgggct gcgaaaatcg gcgtttatgg caccattccc taatattcct caggacattg
     2161 tccataccgg cctgcgggca tactacgatg acattaatac tcatatttcc attccctcct
     2221 aaaaaagccg acga
//
LOCUS       DASQSL010000934         2920 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_113266, whole genome shotgun sequence.
ACCESSION   DASQSL010000934 DASQSL010000000
VERSION     DASQSL010000934.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2920)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2920)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2920
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113266"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..146)
                     /gene="csx16"
                     /locus_tag="VE844_09560"
                     /pseudo
     CDS             complement(1..146)
                     /gene="csx16"
                     /locus_tag="VE844_09560"
                     /inference="COORDINATES: protein motif:HMM:TIGR02620.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0043571 - maintenance of CRISPR repeat
                     elements [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated protein Csx16"
     gene            complement(263..1003)
                     /gene="tatC"
                     /locus_tag="VE844_09565"
     CDS             complement(263..1003)
                     /gene="tatC"
                     /locus_tag="VE844_09565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006890818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HZC01588.1"
                     /translation="MPQNSNQEQEQTFISHLVELRARILKSLGCVLLLFLALAYFSNE
                     IYSLLARPLIQQLPAGSTMIATEVAAPFFAPFKLTLIVAIALSIPYLLYQLWAFVAPG
                     LYQHEQRLVLPLLASSSLLFYLGVAFAYFVVFPLMFRFFTATAPEGVAVMTDISRYLD
                     FVLTMFLAFGFAFEVPIATLLLVRTGAVTVESLVAKRPYIIVGAFVVGMVLTPPDVIS
                     QILLAVPMWLLFELGILLVPFISAPGPD"
     gene            complement(1053..1346)
                     /gene="tatB"
                     /locus_tag="VE844_09570"
     CDS             complement(1053..1346)
                     /gene="tatB"
                     /locus_tag="VE844_09570"
                     /inference="COORDINATES: protein motif:HMM:TIGR01410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase protein
                     TatB"
                     /protein_id="HZC01589.1"
                     /translation="MFDVSFWELCVVGVVALLVLGPEKLPKAARTAGRWIGKARRTFA
                     EVQAEIEHELELEELKRLNQSIQSSKPLQPEKAPPSSAAHLQSGEVNQSSQPE"
     gene            complement(1381..1611)
                     /gene="tatA"
                     /locus_tag="VE844_09575"
     CDS             complement(1381..1611)
                     /gene="tatA"
                     /locus_tag="VE844_09575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010324388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HZC01590.1"
                     /translation="MGISMTELLVVLAIVVLLFGTKKLRTLGSDLGGALKGFRKAVNE
                     PEEAETMNKPSEEGGARVIESGTPSKNDIPKN"
     gene            complement(1614..1952)
                     /locus_tag="VE844_09580"
     CDS             complement(1614..1952)
                     /locus_tag="VE844_09580"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006890815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004636 - phosphoribosyl-ATP diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HZC01591.1"
                     /translation="MEDILLRLAGVIEARKHADPARSYVASLYAKGLDAILKKLGEEA
                     TETVIAAKGGDLKQVIHETADLWFHTLVMLAELGTGPEAVLEELERRFSHSGIEEKAS
                     RGQSLETKGG"
     gene            complement(2027..2419)
                     /gene="hisI"
                     /locus_tag="VE844_09585"
     CDS             complement(2027..2419)
                     /gene="hisI"
                     /locus_tag="VE844_09585"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004362054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004635 - phosphoribosyl-AMP
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HZC01592.1"
                     /translation="MNMSTAWLDQIAWNEEGLVPAIAQGSGTGKVLMLAWMNREALRL
                     TAAEGQAVYWSRSRQRLWRKGEESGHVQRVIEILLDCDHDAILLRVEQEGGIACHTGR
                     HSCFFQRLEDGRWTPIEGVIKDPRLIYR"
     gene            complement(2425..>2920)
                     /locus_tag="VE844_09590"
     CDS             complement(2425..>2920)
                     /locus_tag="VE844_09590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011978580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HZC01593.1"
                     /translation="LNAGADKISINTAAVRNPSFVSKAAARFGCQCIVVAIDARRVES
                     AGGSPRWEIFTHGGRKPTGIDAVHWAVQMAELGAGEILLTSMDRDGTRDGFDLELTRT
                     VAEAVAIPVIASGGVGTLDHLVAGVTQGKADAVLAASIFHFGEFTVRQAKERMAAAGI
                     EVRW"
BASE COUNT          633 a          882 c          804 g          601 t
ORIGIN      
        1 cgcgcgcaga cttcggccac tagattcacc ggcagggtac cgataactac gtcgccgacc
       61 ttgacttggg ccacatccag atgattaacc tgggtatcca cagtgatccc ctgctgctgt
      121 gcccactccc gcgccccagg atggcgggtg acgaaatggg cacatcctca ataagtccgg
      181 ttggtggtgg agccaggccg ctcagtttag caaatctaac tctacactgg ctgcactacc
      241 ctgcgcaggg gacgtgccct tgctaatctg gccctggggc tgaaataaac ggcaccaaca
      301 ggatcccaag ctcaaatagc aaccacatgg gaaccgccag caggatctgg gagatcacat
      361 caggcggcgt caataccatc cccaccacaa aggcgcccac gatgatatac gggcgcttgg
      421 ctaccagcga ttccacggta accgcaccgg tgcggaccaa gagtaaagtc gcgatcggca
      481 cttcgaaagc gaatccgaac gcgaggaaca tggtcaacac gaagtccaga tagcggctga
      541 tatcggtcat caccgccacg ccctccggcg cggtggctgt gaagaacctg aacatcaagg
      601 ggaagaccac gaaataggcg aaggccaccc cgagatagaa aagcagcgag ctcgatgcca
      661 gcaggggcaa caccagccgt tgctcgtgtt ggtaaaggcc cggggccaca aaggcccata
      721 gctgataaag caggtagggg atggacaagg cgatggcgac gatcaaggtc agtttgaagg
      781 gcgcgaaaaa gggtgcggcg acctctgttg caatcatcgt cgatccggcg gggagttgct
      841 ggatcaaggg gcgcgcgagc aggctataga tctcgttgga gaaataagcc aaggccagaa
      901 atagaagcag cacacacccc aggcttttta atatccgcgc ccgtaactct accagatggg
      961 aaatgaaggt ttgttcttgt tcttgattac tgttttgagg caacgggtct atcatcggac
     1021 tcgggtcttt ggggtgaggg ggtcctggct ggctattcag gctgagaaga ctgatttacc
     1081 tccccgctct gtaggtgagc tgcgctcgag ggcggggctt tttcaggctg aagaggctta
     1141 gagctttgta tggattggtt gagccgtttg agctcttcga gctccaattc atgttcgatc
     1201 tcggcctgga cctcagcaaa cgtgcgtcgt gccttgccga tccaacgccc agctgtgcgg
     1261 gccgccttgg ggagcttctc gggacctaac accaagagcg caaccactcc gaccacgcag
     1321 agttcccaaa aactcacgtc gaacatcggt attcggattt aagcggtaat atagtgggct
     1381 ctaattctta ggaatgtcat tctttgaggg ggttccgctc tcgatcaccc gtgcccctcc
     1441 ctcctcgctt ggcttattca tagtttccgc ctcctcgggc tcattcacgg ccttgcgaaa
     1501 gcctttaagg gcgccaccca gatcgctgcc cagggtgcgc aactttttgg tgccgaataa
     1561 gaggacgacg atggcaagga cgaccagtaa ttcagtcatg ctaataccca tttttaccct
     1621 cctttagttt caagagactg cccccggctt gctttctcct cgatcccgga gtgactgaag
     1681 cggcgttcga gctcctcaag caccgcctca ggacccgtgc cgagctctgc aagcatgacc
     1741 agggtgtgaa accacagatc ggcggtctca tgaatgacct gttttagatc gcccccttta
     1801 gcggcgatca ccgtttcggt ggcttcttcg ccgagtttct ttaggatcgc atccaggccc
     1861 ttggcataga gactggccac ataggatcgc gccggatctg catgcttacg cgcttcaata
     1921 acgcccgcaa ggcgtaacag gatgtcttcc atcgagatac cttactatat agtctggtta
     1981 cagagaaaga caaggctcaa taggctctaa gcatgctggc aaggcgctag cggtaaatca
     2041 ggcgcggatc tttgatcacg ccctcgatag gggtccatcg tccatcttcc agacgctgga
     2101 agaagcagct gtggcgcccg gtatgacagg cgatcccgcc ttcttgttcg accctgagca
     2161 ggatcgcgtc gtggtcacaa tcaagcagga tctctatcac ccgttgtacg tgtcccgatt
     2221 cctcgccctt gcgccagagc cgctggcgcg atcgcgacca gtacaccgcc tgcccttccg
     2281 cggcagtgag ccgaagagcc tcgcggttca tccaggccag catcagcacc ttccccgtcc
     2341 cagacccttg ggcaatcgca ggaaccaatc cctcttcatt ccaggcgatt tggtccagcc
     2401 aagcggtgct catattcatg tttgctacca acgcacttca atcccggcag cagccatccg
     2461 ttccttggcc tgccgcaccg tgaattcgcc aaagtggaag atgctcgccg ctagcaccgc
     2521 gtcggctttg ccctgagtta cacccgccac cagatgatca agcgtaccca cccctcccga
     2581 ggcgattacc ggaatggcga ccgcctcggc gacggtccgg gtgagctcga gatcaaagcc
     2641 atcccgggtg ccgtcgcgat ccatgctggt caacaggatc tccccggccc cgagctcggc
     2701 catctggacc gcccagtgca ctgcatcgat cccggtgggc ttgcgtcctc catgcgtgaa
     2761 gatctcccac cgaggtgagc caccggcgct ctccacccgt ctggcatcaa tggccacgac
     2821 gatacattgg caaccaaagc gagcggccgc tttgcttacg aagctcggat tgcgcaccgc
     2881 ggcggtattg atactgatct tatcggcgcc ggcattgagc
//
LOCUS       DASQSL010000935         1034 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_113273, whole genome shotgun sequence.
ACCESSION   DASQSL010000935 DASQSL010000000
VERSION     DASQSL010000935.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1034
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113273"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            129..401
                     /locus_tag="VE844_09595"
     CDS             129..401
                     /locus_tag="VE844_09595"
                     /inference="COORDINATES: protein motif:HMM:NF016143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HZC01594.1"
                     /translation="MRWRRGERSSDIEDRRGQSIGGRFGAGPKLGIGGILMLLALSLI
                     FGQDFFAIFQGSGGLPSERCRASMIQTYLTVANGRHAPGYFLAWGR"
     gene            433..>1034
                     /locus_tag="VE844_09600"
     CDS             433..>1034
                     /locus_tag="VE844_09600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012639020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HZC01595.1"
                     /translation="MSLNSIESVAAVDLGSNSFHMIVAQVSERRLQVIDRLKEMVRLA
                     AGLDQHNVLSKAIMDRAIECLRRFGQRLRGIPEDKVRAVGTNTLRRARNRAEFLARAE
                     EALGHDIEIIAGREEARLIYLGVSHSLEDGCERRLVIDIGGGSTELILGQQFKPEYMD
                     SLYIGCVGLSSRFFSDGRIDAGRLQAAEIAALQEFESVEA"
BASE COUNT          220 a          260 c          316 g          238 t
ORIGIN      
        1 ggcagttaac ggctatagaa tcctaggtta cgccgcaatg cggctagtag cccagactac
       61 agcttgctgt tatgctttgt taaagacacc gtatacatct ttaggcacaa cgtttaggag
      121 aattgtatat gcgctggcgc cgaggggagc gtagctcaga tatcgaggac cgccgtggac
      181 agtccatcgg tggtaggttc ggagcaggtc ccaaattagg gatcggcggc attctaatgc
      241 tgctcgcgtt aagcctgatc tttgggcaag atttctttgc catctttcag ggaagcggtg
      301 gtttaccgag cgagcgttgc cgggcatcga tgatccaaac gtatcttacc gtcgctaatg
      361 ggcgtcacgc cccaggctat ttcttagcct ggggccgata gagtgtatgt cagtccttag
      421 aaacgactac ttatgtcatt aaactccata gaatctgttg ccgccgtaga cctcggctcc
      481 aatagtttcc acatgatcgt ggcccaggtc tcggaaaggc gcctgcaggt gatcgatcgc
      541 ttgaaagaga tggtcaggct ggccgcgggc ttggaccaac ataacgtcct cagtaaagcg
      601 atcatggatc gggctattga atgcttgagg cgctttggcc agcgtttgcg cggcatccct
      661 gaggacaagg tgcgtgcggt cggcaccaat actctgcgcc gggcacgcaa ccgagcggaa
      721 ttcttggcgc gggcggaaga ggcgcttggt catgacattg agatcatcgc cggccgggaa
      781 gaggcgcggt tgatctatct gggagtttcc catagtctcg aagacggctg tgagcgccgg
      841 ctcgtcatcg acatcggcgg tggcagcaca gagctgatcc tgggacagca attcaaaccc
      901 gagtatatgg atagtttgta tatcggttgc gtggggttga gtagccgctt cttcagcgat
      961 ggccgaatcg atgccgggcg cctgcaggcc gccgagatcg ccgcactcca ggagtttgaa
     1021 tcggtcgaag ccca
//
LOCUS       DASQSL010000936         2706 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_184694, whole genome shotgun sequence.
ACCESSION   DASQSL010000936 DASQSL010000000
VERSION     DASQSL010000936.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2706
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184694"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..760)
                     /locus_tag="VE844_09605"
     CDS             complement(<1..760)
                     /locus_tag="VE844_09605"
                     /inference="COORDINATES: protein motif:HMM:NF024793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZC01596.1"
                     /translation="MADPMIEALYTTDQIQEVLIQAVQLSVSRTGPFSLTGPYGTGKS
                     TIITRTFSLLDSQPEFNVKLIALHRGVTKNWLIRKIAEAFEVKTARSYSQTLENVQNY
                     FASVDQTQIVPTLILDDGHFLDMECLSTLYSLLNVEDNKIKFVQLIITGQEPLLDKIA
                     DMGELESRMRSIEIAPMTPDELKKMFQFRWQVAGGKAEDFPFDEQDMESFNIIFRYSK
                     GLPRDAIKVGDELLKFLVGKGAKKATSSEVEQVAR"
     gene            885..2576
                     /locus_tag="VE844_09610"
     CDS             885..2576
                     /locus_tag="VE844_09610"
                     /inference="COORDINATES: protein motif:HMM:NF040081.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6399 domain-containing protein"
                     /protein_id="HZC01597.1"
                     /translation="MGTVIQDMPPINLGSQPRWDRFERADLFEQYRELRIQGLSEREV
                     AKKLNVPRTTLPAWRVWHDSLDICPHVAEFFQSGPGLAFLHRLVIAFHMVCVEVGACG
                     IRLVCLFLHLTGLDRVVAASYGAQQQVNIQIEQAIVDYDQTETPRLAKDMPPKDLSVT
                     QDQTFTSGLCLITMDPESNFIILEQPAQARDQVSWNAWMAPALAQFNCRVIQSTGDEA
                     SGLLAYVEHDLEAHHSPDLFHVQHELVKAVSGPMATKERAADKAVTEATEQLERLQTH
                     PQNPGDKPAKRAPGRPPKNPMSLEQAEQALESGSREHERLAKQREQVKASIRGLGHDY
                     HFVDLERGVRRNGHLIASDIQGHIEQIRTVAEQEGLSQSCLERIEKAERVVPKMQATI
                     EFVSGYVGQQVAQLDLTPPVSFVMHAKLIPSYYLDRVAQTRSVEGGEPLRELAERLRA
                     PLFEPGGVWWELSPETQEQLQNAAKRLATVFQRSSSNVEGRNGYLSLRSHQLRGLNLP
                     RKRQCFTAIHNFFLTRPDGTTAAERFFGQKPRSMFVAILESVELAPAPLNPPRKA"
BASE COUNT          623 a          767 c          738 g          578 t
ORIGIN      
        1 gtcgtgctac ttgttccacc tcggaagatg tggctttctt tgcgcctttg cccaccagaa
       61 acttgagcaa ttcatcaccg actttgatgg catcgcgcgg taagcccttt gagtagcgaa
      121 agataatgtt aaaggattcc atatcctgct cgtcaaacgg gaaatcctcc gccttgccgc
      181 cggcgacttg ccatcggaat tgaaacatct ttttcaactc atccggcgtc atgggggcaa
      241 tttcaatgga ccgcatgcga gattccagct cgcccatgtc cgcaattttg tccagaagcg
      301 gctcttgacc ggtgataatc aactgcacaa atttaatttt attgtcttca acattgagta
      361 agctatagag ggttgaaagg cattccatat ccagaaaatg gccgtcatcc aggatgaggg
      421 tgggaacgat ttgggtctga tcgacactcg caaagtagtt ttggacattt tccagggttt
      481 ggctatacga gcgggccgtt ttgacctcaa acgcttccgc aattttacga atcagccaat
      541 tttttgtgac tccccgatgc agggcaatca gtttgacgtt gaattcgggt tgtgagtcga
      601 gaagggaaaa cgtccgggta atgatggtgg atttacccgt tccatacgga ccggtcaacg
      661 agaaagggcc ggtgcgcgag actgataatt gcacggcttg aattaacact tcttgaattt
      721 gatcggtggt atagagggcc tcgatcatgg gatcggccac tgagcctcca tgacacccca
      781 gcaaaatgag cgactcccct ccatcaaagg ttgaaatgag ggggcgacct cggcatcctt
      841 ggccatgatt actgaaaggc gaaggattga caaaggaggt cgctgtggga accgtaatcc
      901 aagacatgcc accaatcaac ctgggtagcc agccacgttg ggatcgattc gaacgcgcag
      961 acctctttga gcagtaccgg gagttgcgaa tccagggcct ctccgagcgt gaagtggcca
     1021 aaaagctcaa cgttcctcga accactctgc cagcctggcg tgtctggcac gacagcctcg
     1081 atatctgtcc gcatgtcgcc gagttctttc agagcggtcc cggcctggcg ttcttacacc
     1141 gactcgtgat tgcttttcat atggtctgcg ttgaagtcgg ggcatgtggc attcgcttgg
     1201 tttgtctctt ccttcacctg acgggcctcg accgtgttgt ggccgcctcc tatggggctc
     1261 aacagcaagt caatattcaa attgaacaag cgatcgtcga ttatgaccaa actgagaccc
     1321 cgcgcttggc caaggacatg cccccaaaag acctcagcgt gacccaagac caaacgttta
     1381 ccagcggcct ttgcctcatc accatggacc ccgagagcaa ctttattatc ttggaacagc
     1441 cggctcaggc tcgcgatcaa gtcagctgga acgcatggat ggcaccggcc ctggcccagt
     1501 tcaattgccg ggtcatccaa tcgactggcg atgaagcgtc cggcctgttg gcctatgtgg
     1561 aacacgatct agaggcacac cactcacccg acttgttcca tgtacagcac gagctggtta
     1621 aagcggtctc cggtcccatg gccaccaaag agcgggccgc cgacaaggcc gtcaccgaag
     1681 ccacagagca acttgaacgg ctgcaaaccc acccgcaaaa cccgggggac aagcccgcaa
     1741 agcgcgctcc agggcgcccc ccaaagaacc ccatgagcct ggagcaagcc gaacaagcgc
     1801 ttgaatcggg cagtcgtgag cacgagcgtc tggcgaagca acgtgaacag gtcaaggcga
     1861 gcatccgggg tctcgggcac gactaccact tcgtcgatct cgagcgcggc gtccgccgaa
     1921 acggccacct cattgcctcc gatatccaag ggcacatcga gcagattcgc accgttgccg
     1981 agcaagaagg actcagccag agctgcttgg aacgcatcga gaaagccgag cgggtggtgc
     2041 ccaaaatgca agccaccatc gagttcgtct ccgggtatgt gggtcagcag gtcgctcagc
     2101 tcgacttgac accgccggtc tcctttgtca tgcacgccaa gctgattcca tcgtattatc
     2161 tcgatcgcgt cgctcagact cgaagcgtcg agggtggcga accgcttcgc gagctcgccg
     2221 agcggcttcg cgccccactg tttgagcccg gtggcgtctg gtgggagttg agccccgaga
     2281 cccaagaaca gctccagaat gcggccaaga ggctggccac cgtgttccag cgctcgagtt
     2341 ccaatgttga ggggcgaaac ggctacttat ccttgcgcag ccatcaactt cgaggtctca
     2401 atctgccgcg caaacgacaa tgcttcaccg ccattcacaa ctttttcctc acccgccctg
     2461 acgggacgac ggcagcggag cgctttttcg gtcagaagcc gcgctcgatg tttgtggcga
     2521 tattggaatc ggtggagctg gcgcccgcac ctttgaatcc acctcgaaaa gcataaagtg
     2581 gccgatccca cgatcgaggc ccactggtgt aacgataatt aaggcgaggt ttgacctttg
     2641 agggtatagt aggagagtat ggagcaccat ccggtatgac tgggttcaag ttcgcaaggg
     2701 acatcg
//
LOCUS       DASQSL010000937         1263 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_47456, whole genome shotgun sequence.
ACCESSION   DASQSL010000937 DASQSL010000000
VERSION     DASQSL010000937.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1263
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47456"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            151..321
                     /locus_tag="VE844_09615"
     CDS             151..321
                     /locus_tag="VE844_09615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01598.1"
                     /translation="MSKKKMLLLVATAVAVVLSAAATALAASPSHNNDSGKGNPDNKG
                     SSGHNKDFAGLS"
     gene            384..>1263
                     /locus_tag="VE844_09620"
     CDS             384..>1263
                     /locus_tag="VE844_09620"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020714390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HZC01599.1"
                     /translation="MRTFIGRSRLWRQRGHLCIASFLFGAVLLITGCSTETTPSKPTA
                     SGLKPINQAELQSLVDTTIKEFHIPGAVVLLRTPQGDFTAASGTTQLNTTNPPRANTH
                     FRIASNTKTMTAAVIMLLAQHGKLELEDPVSKYVPGVPNGDTITIAQLLEMRSGLYNY
                     TNDPMISATIDTNPAKVWTPDELLTNAFAHPTNFPPGKEYEYNNTNYLLLGLVAEKAD
                     GKPLAQVMHDRLFRPQKMRETELPASTVNTIPEPYSHGYLYGSSSVALVGEPPYSPKV
                     QAAARAGTLLPKDYTEV"
BASE COUNT          288 a          393 c          350 g          232 t
ORIGIN      
        1 ctttataaag cttaatacga atctagctca tttgggcgat acgctgaccc gaccgagagg
       61 gtaggttggg tccgtagcgt ggcgagtcga cgccgcgtga gggtgcagga cggagcttcc
      121 tgtcctcctt ctactaggtc tgggggtagc gtgtcgaaga agaagatgtt gttgcttgtg
      181 gcaacggcag tggccgtggt gctgagtgcg gccgccacgg cgctagccgc tagcccgagc
      241 cacaacaacg actctggtaa aggcaacccc gataataagg gcagctccgg ccataacaag
      301 gattttgccg gtctgtcata gatcgatggg cagcatgacc acagttgagc gcgcacctac
      361 ctagcttcat gaggagaaac gatatgcgga cattcatagg gcgatcacga ttgtggcgac
      421 agcgcgggca cctctgcatc gcgagttttc tgtttggggc tgttctcctg atcacagggt
      481 gctcgactga gacgactcca tcaaagccga ctgcatcggg tctcaaaccg atcaaccagg
      541 ctgaactaca gtccttggtg gacacgacca tcaaagagtt ccacatcccc ggcgctgtgg
      601 ttctcttgcg cacacctcaa ggtgacttca ccgccgccag cggtaccacc caactgaaca
      661 ccacgaaccc gccccgcgcc aacacccact tcaggatcgc ctcgaacacc aagaccatga
      721 cggcagcagt gatcatgctg ctggctcagc acggcaagct tgaactcgag gatccggtgt
      781 ccaagtacgt cccgggcgtg cccaatggcg acaccatcac catcgcccag ctgttagaaa
      841 tgcgcagcgg gctctacaat tacaccaacg accccatgat ctcggcgacc atagatacaa
      901 acccggccaa ggtttggacc cccgatgagt tgctgacaaa tgcatttgcg cacccgacca
      961 acttcccgcc gggtaaagag tacgagtaca acaacaccaa ctatcttctg ctcggtctcg
     1021 tcgctgaaaa ggccgacggc aagccgctgg cgcaagtcat gcacgaccgg ttgttccgtc
     1081 cccagaagat gcgggagacc gagctccccg ccagcaccgt gaacaccatc cccgagccgt
     1141 actcgcacgg ctacctgtac ggcagctcct cggtcgcgtt ggtgggcgaa ccgccgtact
     1201 cgccaaaggt ccaggctgcg gcacgagctg ggaccctcct gccgaaggac tatacggaag
     1261 tga
//
LOCUS       DASQSL010000938         2558 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_195928, whole genome shotgun sequence.
ACCESSION   DASQSL010000938 DASQSL010000000
VERSION     DASQSL010000938.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2558
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195928"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..426)
                     /gene="fabZ"
                     /locus_tag="VE844_09625"
     CDS             complement(<1..426)
                     /gene="fabZ"
                     /locus_tag="VE844_09625"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013033410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019171 -
                     (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HZC01600.1"
                     /translation="MDMLDIHQVLKLLPHRYPFLLVDKVLEHRPGEMVAVKNVTFNEP
                     FFQGHSPDRPIMPGVLILEAMAQVTGLLAFYSADVKPKQNAVYYLVGVDKARFRKPVE
                     PGDQLILTARLVREIRGIYTFEATAAVEGRQVASANFMTT"
     gene            complement(453..1484)
                     /gene="lpxD"
                     /locus_tag="VE844_09630"
     CDS             complement(453..1484)
                     /gene="lpxD"
                     /locus_tag="VE844_09630"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: protein motif:HMM:NF002060.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HZC01601.1"
                     /translation="MDTTFLSSRVVRLGDLAERIGAELHGDPDCEVARLAPLERAGAG
                     DVSFLYDRRYRNFLKITGASAVILGRWDREACSVAALVHEDPYLGYVKAAALLHPEIR
                     VGPGIHPSACIGSGAEIDPTAYIGPYAVVGERVWIGAYALIGPGSIIEPEVRIGDYTR
                     LVAQVTVLRGTTLGRRCIIHPGAVIGADGFGFARDQGRWLKIPHLGGVRLGDDVEIGA
                     NTTIDRGALKDTVIEDGVKLDNQVQIGHNVHVGAHTAIAGCAGIAGGARIGKRCIIGG
                     GAGIAGHLEIANDVVVNGMTVVTKSISAPGTYSSVWPARESGVWKKKVAGFNRGVRSA
                     HKSADNNNP"
     gene            complement(1481..1993)
                     /locus_tag="VE844_09635"
     CDS             complement(1481..1993)
                     /locus_tag="VE844_09635"
                     /inference="COORDINATES: protein motif:HMM:NF015871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HZC01602.1"
                     /translation="MKRIKLIGWGLMLWMYVAPGIILAEEIRLGFVNPIKVLEAAPQA
                     EVARKTLEREFASRDRELGTAQKRIKQMEDRLAKEASTMSDSERRKLEKEVVNGKRDL
                     RRDQEEFRDDLNFRRNEEFGKIQKQIVEAIQAVAREGNYDMVVGEGVVYASKRVDITD
                     KIVERLKAGK"
     gene            complement(2019..>2558)
                     /locus_tag="VE844_09640"
     CDS             complement(2019..>2558)
                     /locus_tag="VE844_09640"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HZC01603.1"
                     /translation="AEAAIPGGDLRYYKLEYDTQWYYPLVEDYILALRGLVGYGDGYG
                     GTRELPFFENFYAGGPRSVRGYEENTLGPEDDRGRALGGNFKVVGNAEIILPVPFLQD
                     VKSVRVAAFVDMGNVFGRGDVFGRSDDIDPGELRLSAGLSGIWLSPFGVLSVSIAQPF
                     NKQPGDETQPFQFTFGASF"
BASE COUNT          583 a          808 c          594 g          573 t
ORIGIN      
        1 agtggtcata aagttggcgc ttgctacctg cctgccctca actgccgcag tcgcttcaaa
       61 ggtatagatc cctcttattt cacgcacgag ccgagcggtc agaatcaatt gatcaccggg
      121 ctcgaccggc tttctaaacc gcgccttatc cacacccaca agataataca ccgcgttttg
      181 cttgggtttt acgtcggcgc tatagaaggc cagtaaaccc gtcacttgcg ccatggcctc
      241 caggattaag acccctggca tgatcggccg gtctggggaa tgcccctgaa aaaaaggttc
      301 attaaaagtg acgtttttga cggcgaccat ttcaccgggt ctgtgttcga ggaccttatc
      361 gaccagtaaa aacggatacc gatgtggaag cagctttaac acctgatgaa tatcaagcat
      421 gtccatcggc atcaaaaaat cgataagtcc ggctaaggat tattattgtc agcagacttg
      481 tgtgcagatc gaacccctcg attaaaaccg gcgaccttct tcttccacac cccgctctct
      541 ctcgccggcc aaaccgatga ataggtacct ggcgcactga tagatttagt caccaccgtc
      601 ataccgttga cgactacatc gttggcgatc tcgaggtgtc ccgctatacc ggccccgccg
      661 ccaatgatac agcgtttccc aatccgtgcg ccaccggcta tcccggcgca gccggcaatc
      721 gctgtatggg cgcccacatg gacattatgt ccgatctgga cctgattatc gagtttgacg
      781 ccatcctcga taaccgtgtc tttcaaggcg ccccgatcga tggtggtatt ggctccaatc
      841 tccacatcat cgcctagccg caccccgccg aggtggggga tcttcaacca gcggccctgg
      901 tctcgggcaa acccgaagcc atctgcgccg atcaccgccc caggatgaat aatacatcgc
      961 cgcccgagcg tcgttccccg caataccgtc acctgggcga caagccgcgt ataatcgcca
     1021 attctaacct cgggttcaat aatcgaaccc ggtcctatca aggcataggc gccgatccat
     1081 acccgctccc caactacggc ataaggacct atataggccg ttggatcgat ctccgccccc
     1141 gagccaatgc acgcgctcgg atgaatgcct ggaccaactc ggatctcggg atgcaggagc
     1201 gcggccgctt ttacatagcc gaggtaagga tcttcatgca ccaaagccgc aacgctacac
     1261 gcctcccgat cccagcgccc aaggatcacc gccgaggcac cggtgatttt caggaagttg
     1321 cgatagcgcc gatcgtacag aaaactcaca tcacctgctc ctgccctctc gagtggagca
     1381 agcctggcta cctcgcagtc gggatcgccg tggagctcgg ctccgattct ctcggcgaga
     1441 tcgcctaaac ggacgaccct tgaacttaag aaggtcgtat ctatttaccc gccttcagcc
     1501 gctcgacgat cttgtcggtg atatctaccc gcttacttgc gtagacgaca ccttcaccca
     1561 ccaccatatc atagtttccc tccctggcca ccgcctggat cgcttcgacg atctgctttt
     1621 ggatcttgcc gaactcctcg ttgcggcgga aattcaaatc atcacggaac tcttcttgat
     1681 cccgtcttaa atcgcgtttg ccattgacaa cctctttttc cagctttctt cgctcgctat
     1741 cgctcatggt cgaggcttct ttcgccaggc gatcctccat ctgcttgatt ctcttctggg
     1801 cagtcccgag ctccctgtct cgagaggcga actcgcgctc taaggtcttg cgagccacct
     1861 ccgcctgagg ggcagcttcc aataccttga tggggttaac gaaaccaagc cggatctcct
     1921 ccgcgaggat aattccaggg gcgacataca tccataacat caaaccccag ccgattaatt
     1981 taatcctttt caaagctcta ctccctcatt cacttaattt agaaagaagc gccaaacgta
     2041 aactggaaag gctgtgtttc atcgcccggt tgtttattga acggttgggc aatactcacc
     2101 gacaacacgc caaagggtga caaccagatc ccggagaggc cagcggaaag gcgtaattca
     2161 cccgggtcga tatcatcgct tctgccgaag acatcgcccc tgccgaagac attgcccata
     2221 tcgacaaagg cggccacccg aaccgatttg acatcttgta ggaagggaac gggtagaata
     2281 atctcggcat tgcccactac cttgaaatta cctcctaaag cccggcccct gtcgtcttcc
     2341 ggtcccagcg tgttttcctc gtaaccacgc accgaacggg gaccccccgc atagaaattc
     2401 tcgaaaaacg gcagttcccg ggtgccgcca taaccatccc catagcccac caagccccgt
     2461 agggcgagta tgtagtcttc cactaaggga taataccact gggtatcgta ttctagtttg
     2521 tagtagcgca gatcaccccc cggtattgcc gcttcggc
//
LOCUS       DASQSL010000939         1344 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_144579, whole genome shotgun sequence.
ACCESSION   DASQSL010000939 DASQSL010000000
VERSION     DASQSL010000939.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1344
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144579"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..572
                     /locus_tag="VE844_09645"
     CDS             <1..572
                     /locus_tag="VE844_09645"
                     /EC_number="2.7.10.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004713 - protein tyrosine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0004715 - non-membrane spanning protein
                     tyrosine kinase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CpsD/CapB family tyrosine-protein kinase"
                     /protein_id="HZC01604.1"
                     /translation="VDTPPKVIVLTSPSPGEGKSTTTANLGVTLAQVGKSVLTLDCDL
                     RRPRLHSMFDVHNETGLADILTGGHKMEEVWREPIPGLKLICAGPPPPNPAELLSSQR
                     FAEFLSEMRRKFDYVLVDTPPVGRADAAVLAASADGVLLILDSQRTRKGSLRQALRGL
                     RGVGANVLGTVMNNFEVSRSGNTPYNYPY"
BASE COUNT          283 a          361 c          424 g          276 t
ORIGIN      
        1 tggtagatac acctcccaag gttatcgtgc taacgagccc gagccccggt gaaggcaaga
       61 gcaccaccac cgccaatttg ggggtgacgc tagcacaggt cggcaagagc gtcttgacct
      121 tggactgtga tcttcgcaga ccgcgtctgc acagcatgtt tgacgtacac aacgaaacag
      181 gtctggcaga catcctgaca ggcggccaca agatggaaga ggtgtggcga gagccgatac
      241 ccggattgaa gcttatatgc gccggtcctc cgcctcccaa cccggcggag cttctgagct
      301 cccagcgttt tgcggagttt cttagcgaga tgcggcggaa gttcgactac gtgctggtgg
      361 atacgccacc cgtaggaagg gcagatgccg cggtgctggc ggccagcgcg gacggggttc
      421 tgctaatttt ggattctcag cgtacgcgca aagggtctct gcgacaagct ctacgcggct
      481 tgcgaggcgt cggagctaat gtgctgggaa cggtcatgaa taactttgag gtttccagaa
      541 gcggaaacac cccgtataac tacccctact agacgtggaa gtacattagc ctcggtagca
      601 gctcgtacag ccctcagcag aaccggtgat tgagcggcaa gggtgcacac tggaatctac
      661 cgtagttgat cgcttcagcg gttcgtcgct cagacgccgc tacattccga cagcatccag
      721 gctctcgggg ggaagatcgg ggcggccacg ctcggtgtgg tcaccaacgg tctgctagcg
      781 cacatgctct ctccgcgaaa tttcggtgcc tacttttggc gttcagcata gtctcggttg
      841 gcacggtgat aaggtctttg ggactgccca agacggtgtt acggttcgtc gccgagggca
      901 tgacgcgcaa ccagcccgga cgcgcacgga gggcgcctgc ttggcgctat tgtggacgac
      961 gagcggagaa tatcagaggg ggagagggag gcccaactat cccgcatacg tgcctcttca
     1021 gcctgcaagg ccttggtgaa gctagttagg ggttcacgac cgacctgtac gcagcgtaaa
     1081 attcgagtac gccctctcta gcggagtgcg caggatggcg atgagtttag gtcgggtata
     1141 gagcatttta tgaggccagg ggctttagaa gtgtacaggt acgaggcgga agcctcacct
     1201 atggctttct cgtcagagac cccttcagac agcgcccggt aatcgccgag gttggttacc
     1261 ggggtgctcc tgcgacccgg cctgcgaaaa ttcgagtgca tgatttcaaa gaagtgtggc
     1321 tcattgcggg gactcatgta ggcc
//
LOCUS       DASQSL010000940         1323 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_144586, whole genome shotgun sequence.
ACCESSION   DASQSL010000940 DASQSL010000000
VERSION     DASQSL010000940.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1323
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144586"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..746)
                     /locus_tag="VE844_09650"
     CDS             complement(<1..746)
                     /locus_tag="VE844_09650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014972952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC01605.1"
                     /translation="MNLYAIRAIYKFEMARTWRTLLQSIISPVISTSLYFVVFGAAIG
                     SRITAIDGVSYGAFIVPGLIMLSLLTQSISNASFAIFFPKFMGTIYELLSAPVSSIEI
                     VISYVGAAATKSIILGVIILATAGLFVPLEIAHPLWMITFLVLTAVTFSLFGFILGIW
                     ADGFEKLQLVPLLIITPLIFLGGSFYSVDMLPPFWQTVTLFNPVVYLISGFRWSFYGI
                     ADVSVGLSLAMTILFLTICLVAIWWIFKTG"
     gene            complement(743..>1323)
                     /locus_tag="VE844_09655"
     CDS             complement(743..>1323)
                     /locus_tag="VE844_09655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018428632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZC01606.1"
                     /translation="KVLKDLSLWDRKDSKIMTLSGGMKRRVMIAKALSHEPQILFLDE
                     PTAGVDVELRRDMWQTVRLLRATGVTIILTTHYIVEAEEMADRIGVISNGELVVVEDK
                     AELMRKLGKKQLTLQLHSKLDGIPSELADYGLELTPDGNELIYTYNTQTERTGITALL
                     ADLNGTGIKFNDLQTKQSSLEDIFVSLVKERR"
BASE COUNT          315 a          348 c          371 g          289 t
ORIGIN      
        1 taccctgtct tgaagatcca ccagatcgcc accaagcata tggtcaggaa gagaatcgtc
       61 atggcgaggc tcaggcctac gctcacgtcg gcgatcccgt agaaactcca gcggaagccg
      121 ctgatcaggt atacgacagg attgaacagg gtgaccgtct gccagaacgg cggcaacata
      181 tcgacggagt aaaaactacc gccaaggaag atcaatggcg tgatgataag aagcggcacg
      241 agttgcagct tctcgaaacc atcagcccag atgccgagga taaagccgaa aaggctgaag
      301 gtcacagctg tgagcacgag gaacgtaatc atccacagtg gatgcgcgat ctcgagcggt
      361 acgaacaggc ccgccgtggc caggatgatc acgcccagaa tgatcgactt ggtcgcggct
      421 gctccgacgt agctgatgac gatctcgata gaggaaacgg gagccgacag gagctcgtat
      481 atcgtaccca tgaacttggg aaagaaaatg gcgaacgatg cattggagat gctctgcgtc
      541 agcagcgaca gcatgatgag tccgggtacg ataaaggcac catagctgac cccatcgata
      601 gcggtgatgc gtgaaccgat cgccgcgccg aagacgacaa aatacaagga cgtcgagata
      661 acgggtgaga taatgctctg cagcaatgta cgccaggttc ttgccatctc gaacttgtag
      721 attgcgcgga ttgcgtaaag gttcatcgtc tctccttcac caaactaacg aagatgtctt
      781 ccagtgagct ttgtttcgtt tgcagatcgt tgaatttgat tcctgttccg ttgaggtcgg
      841 cgagcaaagc ggtgatgccc gtgcgctcag tttgcgtgtt gtacgtgtag atcaattcgt
      901 taccatctgg cgtgagttct agtccatagt cagcgagttc gctcggaatc ccgtcgagct
      961 tgctgtgcaa ctgtagcgtc aattgctttt tgccgagctt tcgcatgagt tcggctttgt
     1021 cttcgaccac aacgagctcg ccattgctga tcaccccgat ccggtcggcc atctcttcgg
     1081 cctcgacaat ataatgggta gtcaagatga tggtcacgcc ggttgcgcgc agcaagcgca
     1141 ctgtctgcca catgtcccgt ctcaattcga catcgacgcc cgccgtcggc tcgtcgagaa
     1201 agagaatctg cggctcgtgc gaaagggcct tggcgatcat gacccggcgc ttcatgccgc
     1261 cggagagcgt catgattttg ctgtcctttc tgtcccacag ggacaggtct ttgagcactt
     1321 tct
//
LOCUS       DASQSL010000941         4596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_21813, whole genome shotgun sequence.
ACCESSION   DASQSL010000941 DASQSL010000000
VERSION     DASQSL010000941.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4596
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21813"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(196..489)
                     /locus_tag="VE844_09660"
     CDS             complement(196..489)
                     /locus_tag="VE844_09660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01607.1"
                     /translation="MSANQGMDQNRHLKGKQFIQELNRRLQGHYNYYGLRGNSESIYR
                     FYKWAKQCAFKWLNRRGGKRKSFTWEAFERALDRLGIALPKITEVKRQHVVYA"
     gene            519..818
                     /locus_tag="VE844_09665"
     CDS             519..818
                     /locus_tag="VE844_09665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01608.1"
                     /translation="MLDSHLSLPIREPVKLESQKGKPTLHTRMKAAKPEDLGLFRRHF
                     QTELSEPFRQRSVEAFGIFFETKRTHEIIGIAAHHGLAAYLLLCHFLKPEIERIV"
     gene            complement(948..2624)
                     /gene="ltrA"
                     /locus_tag="VE844_09670"
     CDS             complement(948..2624)
                     /gene="ltrA"
                     /locus_tag="VE844_09670"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017292094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZC01609.1"
                     /translation="MSDIIKTQRSFATKALHQPTHRFDHLYRIICQREWIETALESVL
                     ANKGARTPGIDGLTKEDLATESARLTLVQAIEQELRGCSFRPSPVRRVYIPKGNGKQR
                     PLGISTLKDRVVQMLIKMVLEPIWENDFLNCSNGFRLGRRTMDCIALLDSYINERNKY
                     FWVIEGDIRGAFDNVCQKILLDLLAERVADSRLLELIDHFLKAGLMQGKLFHRIDTGV
                     PQGAICSPLMANIYLHQLDLYWWRHYGSLDRKVKEHRRQTQQGNCALIRYADDWLLLT
                     NGSKQEAYRLRDEFQSFLAERLKLELAVEKTHVTHVNDGFNFLGFQVRRYLSGHDRPK
                     LLVTPSTKAQQCLKAKIKEMTARRRFRDSPLLKFGALNAVLRGWITYYRHSNAKDTAK
                     DLDFWVNRRLFWWLAKRHRLNARRILTMYQHRENGTHNNLAIQNGEQALFLYRMSDQS
                     ITKYRSRKPPNPYLTGDWMTQVEQPEAPLPDYVWLGNAENNEQWREIKAQVKAERGAQ
                     CERCGSAVNLDLHHRKAKRYSGKDTIDNAELLCEPCHVRTPTYGDHSRLQ"
     gene            complement(3236..3808)
                     /locus_tag="VE844_09675"
     CDS             complement(3236..3808)
                     /locus_tag="VE844_09675"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HZC01610.1"
                     /translation="MLLECWQDLNKDAASGVDGVTAAQYQEHLEENIQDLVRRLKTKC
                     YRAKLVRRCYIPKDNGKERPLGIPALEDKLVQLACAKILNAIYEQDFLDFSNGYRPNR
                     SAKETVADLIFNLQYGCYGYIVEADIKNFFDTIDQDWLLKMLAQRIDDRALLHLIRKW
                     LKAGILDTDGKILDPETGTPQGGVSARRSA"
BASE COUNT          881 a         1389 c         1175 g         1151 t
ORIGIN      
        1 tggtgcgtgg acaacgtctt taaagcaccc cattccggtt ggctgcggga ggttttctat
       61 tacctggctg ttctgtacaa ccggactctt acggtaggag cctctgttac cagaggcccc
      121 ccgcacagac ccggacgtgc agttttcccg catccggttc ctcggttgta ctcgctttcg
      181 cgtcgaacaa agtagtcatg catacaccac gtgctgccgc ttaacctctg tgattttcgg
      241 gagggcgatg cctaaacggt ccagtgctct ttcgaacgct tcccaggtaa agcttttccg
      301 cttgccgccc cttcgattga gccatttgaa tgcacactgc ttggcccact tatagaaacg
      361 gtagatagat tcactatttc cccggagtcc gtaatagttg taatgccctt gcaaccgccg
      421 gttgagttcc tggatgaact gctttccctt gaggtggcga ttctgatcca ttccttgatt
      481 cgccgacatg cgccctggag tttcttgcgt gaggttcggt gcttgactcg catctctcct
      541 tgccgatccg ggaaccagta aagctcgaat cccagaaagg taaaccgacg cttcatactc
      601 ggatgaaagc ggctaaaccg gaggacttgg gtcttttccg gcgccacttc caaaccgaac
      661 tttccgagcc gttcaggcag cgctcggtag aagctttcgg catcttcttt gaaacgaaac
      721 gcacacacga aatcatcggc atagcggcac atcatggcct cgccgcgtac ctgcttcttt
      781 gccactttct caaaccagag atcgagcgca tagtgtagat atacattggc gagtatcggt
      841 gagagtggag tagggacagc gcgcaccttc ctagtttgca ccaagcgtgt ttcaccatcc
      901 ctctccccaa accgggcatg agagtttcca actcacccgg ctttccatca ttgcagacga
      961 ctatggtcac catacgtcgg tgttcgcaca tggcagggtt cgcagagcaa ttcggcgttg
     1021 tcaatggtat ctttaccact gtagcgcttg gctttacggt gatgcaggtc gaggttcacc
     1081 gcactgccgc agcgctcgca ctgagctcca cgttctgctt taacctgcgc tttgatttcg
     1141 cgccattgct cattgttctc ggcgttaccg agccagacgt aatcgggtag cggagcttca
     1201 ggctgctcga cctgggtcat ccagtcgccc gtgagatacg gattcggcgg cttacgggac
     1261 cgatatttgg tgatcgactg gtcgctcatt cgatagagaa atagcgcctg ctcgccgttt
     1321 tgaatggcca ggttgttatg ggtgccattt tcgcggtgtt gatacatcgt gaggatgcgg
     1381 cgggcattca accgatgtcg cttcgccagc caccagaaca gccgccggtt aacccagaag
     1441 tcgaggtctt tggcggtgtc tttggcattg ctatggcgat agtaggtgat ccagccccga
     1501 aggaccgcgt tgagggcacc gaatttgagc agcggagaat cccgaaaccg ccgtctcgcc
     1561 gtcatctcct tgatcttggc tttcaggcat tgttgcgctt tagtactcgg cgtgaccaac
     1621 agcttgggcc ggtcgtggcc gctgagatag cgccgtacct gaaaaccgag aaagttaaag
     1681 ccgtcgttca catgggtgac gtgcgtcttc tcaacggcga gctcaagctt caatctctcg
     1741 gcaagaaagc tctgaaactc atcgcgcaag cgatacgctt cctgtttgct accgttggtc
     1801 aacagcagcc agtcgtcggc gtatctgatc aatgcacagt tcccttgctg cgtttgcctg
     1861 cgatgctcct tgactttgcg atctaggcta ccgtagtgcc gccaccagta cagatccagt
     1921 tggtgcaaat atatgtttgc cattaacggc gaacagatgg ccccctgggg taccccggtg
     1981 tcgattcggt ggaaaagctt gccctgcatc agacccgctt ttagaaagtg gtcgatcagt
     2041 tccaggagtc gggagtcagc tacccgttct gcgagcaggt cgagcaagat tttctgacaa
     2101 acattatcga acgcaccgcg gatatcgccc tcaatcaccc aaaagtactt gttgcgctca
     2161 ttgatgtagc tgtcgagcaa cgcgatacag tccatcgtcc tgcgtccgag tcgaaagccg
     2221 ttggagcagt tgagaaagtc attctcccag atcggctcca gcaccatctt gatgagcatc
     2281 tgtaccacac ggtctttcaa ggttgaaatc cccagcggtc gttgcttgcc attgcccttt
     2341 gggatgtaga cgcgtcgcac cggcgaggga cgaaagctac aaccacgtag ctcttgctca
     2401 atcgcctgca caagcgttaa tcgggcgctt tccgttgcca aatcctcctt ggtgaggccg
     2461 tcaatccctg gcgtgcgtgc gcctttgttg gcgagcacac tctctagcgc cgtctctatc
     2521 cattcccgct ggcagatgat ccggtagaga tggtcgaatc gatgcgttgg ttggtgcaac
     2581 gccttcgtgg cgaagctacg ttgggttttg atgatatcgg acatacctct tagtcctctc
     2641 gactcccctc agtaacctct tgcaatgact gcggtgcttc gccctgtaga gggctttccc
     2701 ctccgccgac tactaccacc gctccgccac gcggtcatct cctcagccgc agctggccca
     2761 gcctgaccgg cgttcgacct tcgcacgacc cgaccgatga ccacgcttcc gacgttcaca
     2821 tagcggtacg gattacggtt gaccgtaggc tccttcttta cgcccgttga gcacagaccc
     2881 agtgccctcg acgttggctg atggcttata cccctgtagc cagcgcagtt tggccgaatc
     2941 aaaagccgtt tcgtcgcacg cgtggagagc gactacccaa cgtctcacac catccccgcc
     3001 attttgcagt gtgtccaagg tgcggacgct tcagacaaag gtttcttgcg tagccctagt
     3061 caaccccagg ctaggggcct tgtgccgtag cggagtgccg gcaggttgcc ccgtgttctc
     3121 cgggctccag acgggttgtg gctcattgtc ccccgcctgc cggatcagcc ttaatgcttt
     3181 gggggaaaca ttatctcaac caagcctatc cctccgatta tattgaacat taccactatg
     3241 cgcttcgccg cgcactcacg cctccttgtg gcgtccccgt ctccgggtcc aggatttttc
     3301 catccgtgtc gagtatcccc gcttttagcc atttgcgaat caagtgcagc aaggctctgt
     3361 catcaatccg ttgcgccagc attttcagga gccagtcctg gtcgatagtg tcgaagaagt
     3421 ttttaatatc ggcttcaacg atatacccat aacacccgta ctgtagattg aagatcaggt
     3481 ctgccaccgt ctccttcgca cttcgattgg gccggtagcc gttgctgaaa tccagaaagt
     3541 cctgttcata gatagcattc agtatcttgg cgcaggccag ttgtacgagt ttgtcctcca
     3601 acgcgggtat gcccagcggc ctttctttcc cgttgtcctt aggtatataa cagcgtcgta
     3661 ccagtttggc acgatagcac ttggttttca gtctccgaac caaatcctga atattctcct
     3721 ccaggtgttc ctggtactgc gccgccgtga ctccatccac tccgctggcc gcgtccttat
     3781 tcaggtcttg ccagcactcc agtaacaatt cagcattcag acattgatac agattctgaa
     3841 aacgatggtc tttgctttct tttgctcgat ttgctattcc ccgcagggag gttggctcgt
     3901 gttgatccag cccaccatgt ccggcacgag tttcctttgc aggctgcgta cttccgtcag
     3961 gtccttcccc atgtggcggg ctttccccac ctccgagtac tacgcctgat aagacacccc
     4021 aagagctggt agcgctcacc cgcccacctg gctcagggtt ctcccacaaa agggtaggtt
     4081 ccagcttagt tccgtttccg ggtttcccca tgtgtgcctc aatatctgtt taccttactt
     4141 ctgctgtccc catgtcagga gcccgttggg gcttcccgag ttctcccgtg cttctcttcc
     4201 tgtatgccac ggcctgtgga ctccggcgga cctccacacc ctcgcctaat cgggcgtctc
     4261 gtattgcctt cgggcacgtt aaaaccctcg gcgtccgcaa caaactcatc tcgaagctgt
     4321 accagcactt cagggtgcgc gtcaccccta cggcctccag gatgctctgt ctacgcttcg
     4381 cctgttttgt tcgccgcctc ccggcgtctc cgctacagac gcaagactca atacgggtgg
     4441 gtggctagcc cttacccgac ggggactttc accccgcaag aagcaccgag cttttctcgg
     4501 cgcgataacg ccaaagctca gccgcgcctg gaggcggaag cgcagcggac gctgtaaggc
     4561 gtcggccgca gcgcctggtt agcccgcgcc cttacc
//
LOCUS       DASQSL010000942         2421 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_21817, whole genome shotgun sequence.
ACCESSION   DASQSL010000942 DASQSL010000000
VERSION     DASQSL010000942.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2421
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21817"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1057
                     /locus_tag="VE844_09680"
     CDS             <1..1057
                     /locus_tag="VE844_09680"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HZC01611.1"
                     /translation="RIAQGRLREAMSTYERGLQLATEQGEPVLRGAADMYVGMSQLYR
                     ERNDLDAATQHLLRSKELGELAGLPQNRYRWRVAMARILEVQGDLDGAFDLLQEAERL
                     YVSDFFPNVHPVSASKTRVWVAQGRLGEALGWAREQGLSAHDDLGYLREFEHITLARV
                     LLARYKSDREEHSIHEAMELLECLLQAAEEGGRMGSVIEILMLQALAHEVQGDSSTAL
                     VPLERALSLAEPEGYVRVFVDEGRPMAQLLSEAAAHGIMPAYTTKLLAVLESEEHKSE
                     EGSHRFPTESVVEPLSQRELEVLRLIARGLSNREISQRLFLALSTVKGHNRIIFSKLM
                     VQRRTEAVARARELGLL"
     gene            1274..1591
                     /locus_tag="VE844_09685"
     CDS             1274..1591
                     /locus_tag="VE844_09685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020143439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01612.1"
                     /translation="MSNKLNPKTDPDQPLVYQIRLQGHLGRNWTHWFGDVTITLEEGG
                     ETLLTCPVADQAALYGLLRKVRDLSLPLISVTRAQTDQIDGPDFKQPIEATTLEGKQD
                     GSN"
     gene            1578..2066
                     /locus_tag="VE844_09690"
     CDS             1578..2066
                     /locus_tag="VE844_09690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01613.1"
                     /translation="MGAIKKLNSIRTIRYTGWVAGLLYIFLDLYIVFTVDLNIVFSDL
                     FAPLSMLYVPEALVGRVEVVGGIWILLVTWAALLAGRHPRALNYLGVVIGGAGVLSLF
                     PALEVLGSGFRLGEMVWFGWLGIVWFRGSRSAAARKLRTFFAVRFGKRVATTQDLTPT
                     RG"
     gene            2216..>2421
                     /locus_tag="VE844_09695"
     CDS             2216..>2421
                     /locus_tag="VE844_09695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01614.1"
                     /translation="MSTDTKSTTALHDPPMPVRAKLAAAWTSFMFFCIYVDYLHLYKP
                     GTIDDILAGVVFEFDISQTFVVISL"
BASE COUNT          546 a          658 c          729 g          488 t
ORIGIN      
        1 acggattgcg cagggccgtc tgcgcgaggc aatgagcacc tatgaacgcg gattgcagct
       61 tgcgacggag cagggcgagc ccgtgctgcg gggagcggca gacatgtacg tgggaatgag
      121 ccagctttac cgtgaacgta acgatttaga tgccgccacg cagcacctgc tcagaagcaa
      181 ggaactcggt gagttggccg ggttaccaca aaaccgatat cgctggcgcg ttgctatggc
      241 tcggatattg gaggtccagg gagatctgga cggcgcgttc gatctgctcc aggaggcaga
      301 gcgcctgtat gtgagcgact tcttcccaaa tgtgcatcct gtctcggcat cgaagacacg
      361 ggtgtgggtc gcccagggga ggttgggtga agccctcggc tgggcgcggg agcagggctt
      421 gtccgcccac gacgacctcg gctacctgcg cgagttcgag cacatcaccc tggcaagggt
      481 gctcttggcc cgatacaaga gcgatcggga agaacactcc attcatgagg caatggaact
      541 gttggagtgc ctcctgcaag cggcggaaga aggtgggagg atggggagcg taatcgagat
      601 cctgatgctg caggcgctcg cccacgaggt gcaaggcgac agctctacgg ctctcgtgcc
      661 tctggaacgt gccctgtcgt tggcagagcc ggagggctac gtgcgagtct ttgtggacga
      721 aggtaggccg atggcccaac tactgtccga agcagccgcc cacgggatca tgccggccta
      781 tacgaccaag ttgctggccg tactcgaatc cgaagagcac aagagcgaag aaggatctca
      841 tcggttccct accgagtccg ttgtcgagcc gttgagccaa cgcgagctgg aggtactacg
      901 actcatcgcc cgggggctct cgaatcgaga gattagccag cggcttttcc tcgccttgag
      961 taccgtcaaa ggacacaatc ggattatctt cagcaaactt atggtccaaa ggcgcaccga
     1021 agctgtagcc cgagcccgcg agttgggcct gttgtagccc gaacgccagc ttgcccgcaa
     1081 gtttggcatc aagaacggca cccgagcgcc ccgtaaagtc agaactttag aacttccatc
     1141 aactcagtag gtccaaaaca atacccccaa accgtacttt agtagctgtt cgtcaatacc
     1201 gcgctgcaga taggctcttg tacatgaacg agtggcacag acctttgtga gagttcagaa
     1261 gaggtacagg agcatgtcaa acaaactcaa tccgaaaacg gacccggacc aaccgttggt
     1321 ttaccagatc cggctccagg gccatctggg tcgtaattgg acgcactggt tcggggacgt
     1381 gaccatcacc ctggaagagg gcggcgagac gcttttgacc tgcccagtgg cagatcaggc
     1441 cgcgctctac gggctgctaa ggaaggtgcg cgacttgagc ctaccactca tctcagtcac
     1501 gcgcgcccaa accgaccaga tagacgggcc agatttcaaa cagccaatcg aggccaccac
     1561 cttagaaggg aaacaagatg ggagcaatta aaaagctgaa ctcgattagg acgatcaggt
     1621 atacagggtg ggtcgcaggg ttgctgtaca tattcctcga tctgtacatt gtgttcaccg
     1681 tcgatctgaa cattgtgttc tccgatttat tcgctccctt gagcatgttg tatgttcctg
     1741 aggcattggt cggcagggtt gaggttgtag gcggcatatg gattctgctg gtaacttggg
     1801 cagctttgct ggcaggaagg catcccagag cactgaacta cctcggcgtg gtgatcggtg
     1861 gggcgggcgt cctctcgctc ttcccggctc ttgaggtgct tgggagtggt ttcaggctgg
     1921 gtgaaatggt gtggttcgga tggctgggga tcgtctggtt ccgcggtagc cgaagcgcgg
     1981 cggcgcgaaa attgcgcacg ttcttcgcag ttagattcgg aaagcgggta gcaaccacgc
     2041 aggatcttac gccaacgcgg gggtgagtca tagcgacaag gaggtgtcaa tagttttatc
     2101 caagttcgat tcaatgaacc tgatcaatac cgttcgagta aaggagataa atgatgaacg
     2161 acggacgatg aggtccaatc caggcacacc caccctcaac acgatggaga gacccttgag
     2221 cacagacacc aagtccacga cagcactgca cgatccgccc atgccggtca gagccaagct
     2281 cgcggccgcc tggaccagct tcatgttctt ctgcatctac gtcgactacc tccacctgta
     2341 caagcccggc accatcgacg acatcctggc cggcgtcgtc ttcgagttcg acatcagcca
     2401 aactttcgtg gtcatttcgc t
//
LOCUS       DASQSL010000943         1151 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_144603, whole genome shotgun sequence.
ACCESSION   DASQSL010000943 DASQSL010000000
VERSION     DASQSL010000943.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144603"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..914)
                     /locus_tag="VE844_09700"
     CDS             complement(<1..914)
                     /locus_tag="VE844_09700"
                     /inference="COORDINATES: protein motif:HMM:NF033519.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAzo13 family transposase"
                     /protein_id="HZC01615.1"
                     /translation="MLETRTAGDPDDATIVFTDLSPARISLTMAKMGTPVCADVIRHW
                     MEEQDLRLRKIAKDLAGGHSPDRDTQFERIAELITAYEAAGNPYFSIDTKAKEHLGKL
                     FRAGRVRSTHAFHAFDHDFPSWADGVLIPHGIYDRVRNRGHINLGLSHDTSQFACDSF
                     RLYWNRIGKQGYPKATSILWLCDCGGSNAANTYIFKHDLQELVDQIGVEIRVAHYPSY
                     CSKYNLIERRFFPHITRACQGMLFDSLDTVATLMRKATTSTGLRTTVNVIRRHYETGR
                     KATEQIKQNLKIVFDDLLSKWNYRAIPQ"
     gene            complement(920..>1151)
                     /locus_tag="VE844_09705"
     CDS             complement(920..>1151)
                     /locus_tag="VE844_09705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008671553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01616.1"
                     /translation="TLSEKDRRRFAAVQARQFGHGGVRYIAEVLGCSRRTIERGFAEL
                     DDLPHDPAAGQVRRPGAGRKKKSCPTPPSNRI"
BASE COUNT          246 a          331 c          317 g          257 t
ORIGIN      
        1 cattgtggga tcgcacgata gttccacttg gatagtaggt catcgaatac gattttcagg
       61 ttctgcttta tttgctccgt ggccttgcgt ccggtctcat aatggcggcg aatcacattc
      121 actgtcgttc gcagtccggt gcttgtggtg gctttgcgca ttaaggtggc tacggtgtct
      181 agcgagtcga ataacatccc ctgacacgcg cgtgtgatat gaggaaagaa acgacgctca
      241 atcaaattgt acttcgaaca ataactcggg tagtgagcta cgcgaatctc cacaccgatc
      301 tggtccacca actcttgcaa atcatgctta aagatgtagg tgttggccgc gttgctgccg
      361 ccacagtcgc acagccacag gattgaagtc gccttcggat aaccctgctt gccaatgcga
      421 ttccaataca agcgaaagct atcgcacgca aactggctcg tatcatgtga taaccccagg
      481 ttgatatgcc cccggttgcg cacccgatcg taaatgccgt gcggaatcag cacgccgtcg
      541 gcccaactgg gaaagtcatg atcgaaggcg tgaaaggcgt gcgtgctgcg cacccgaccg
      601 gcccgaaaca gcttgcccag atgctctttc gctttggtgt caatcgagaa atagggattg
      661 ccagcggctt catacgctgt gatgagttcg gcgatccgct caaactgcgt gtcgcgatcc
      721 ggcgagtgcc cgccagcgag gtctttggca atcttgcgca agcgcaggtc ttgctcctcc
      781 atccagtgcc gaatcacatc ggcacaaacc ggtgtgccca tcttggccat cgtgagggaa
      841 atccgggctg gagacagatc ggtaaacaca atggtggcgt cgtcgggatc gcctgccgta
      901 cgggtctcca acaccgactt cagattctgt tcgagggggg agtcgggcag gacttttttt
      961 ttcgacccgc acctgggcga cgcacctgtc ccgccgcggg gtcatgaggc aagtcatcga
     1021 gctcggcaaa cccccgctca atggttcgcc gcgagcagcc taaaacttcg gcaatatacc
     1081 tcacgccgcc atggccaaat tgccgcgcct gcactgccgc aaaacgccgc cggtcttttt
     1141 cggacagggt t
//
LOCUS       DASQSL010000944         1432 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_158169, whole genome shotgun sequence.
ACCESSION   DASQSL010000944 DASQSL010000000
VERSION     DASQSL010000944.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1432
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158169"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            111..>1432
                     /gene="wbaP"
                     /locus_tag="VE844_09710"
     CDS             111..>1432
                     /gene="wbaP"
                     /locus_tag="VE844_09710"
                     /inference="COORDINATES: protein motif:HMM:TIGR03022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-phosphate galactose
                     phosphotransferase WbaP"
                     /protein_id="HZC01617.1"
                     /translation="MAILVKQTLFWGPEQLTAQSAAAIVPAVAVWVGVRALSRLYSVY
                     GIDSVEELRRHTYTVFATLAILAIFALGLKVGQDLSRLLLGLFFLGLLLAAPFARYFV
                     KLGLRKVGLWGKPVMIFGSGQNEGRVRRNLARLLQEKWDLGYNPVAVLNCQLPRLAPT
                     HPTRFARPQEGSPGLQILANAADLAHRQGVDTAIFAMPHTRREQVAEIVGVASIRFRH
                     VLIIPNLNGVTNSAVVARDLAGTLAVEIKYNLLNPWALRAKRIADIVSTAIGGVLILP
                     FILVLALLVFAESGGPVFYKDRRMGRDGNLFSCVKFSTMVPDAEALLQRMIETEPELR
                     EEYSRYHKLRDDSRVTRVGRFLRKTSLDELPQLWNVLRGEMSLVGPRPYLPRESKEIG
                     ITQSEILRVPPGITGPWQVTGRNQASFDERVQMDACYVRDWSVWLDLVL"
BASE COUNT          284 a          396 c          431 g          321 t
ORIGIN      
        1 ccagataacg tccgtcaaag accacgcgct ggaggcgagt gtggcggcca cgactcgtcg
       61 tcgccacgct gattttctca gacgtcttgc ttgcactctt gatctggaat atggcaatcc
      121 tggtaaaaca aactctcttc tggggcccag aacagttgac ggcgcagagc gctgccgcca
      181 tcgtgcctgc ggtggctgtg tgggtggggg tgcgcgcctt gtcgcgactg tactcggttt
      241 acgggataga ctccgtagag gagctgcgcc gtcacaccta cactgtgttc gctaccctcg
      301 ccatactagc gatctttgcc ctaggtttaa aggtcggaca ggacctttca cgcctactgt
      361 taggtctgtt cttcctgggt ctcttgttgg ctgccccttt cgcgcgatac ttcgtgaagt
      421 tgggactgag aaaggttggg ctgtggggca agccggtgat gatcttcggc tccgggcaga
      481 acgaggggag ggttaggagg aacttagcaa ggctattgca ggaaaagtgg gatctagggt
      541 acaaccctgt cgctgtgctc aactgtcagc tacctcgtct ggctccgact catccgaccc
      601 ggttcgcgcg accgcaggag ggttcgcccg ggttgcagat tttggctaat gcggcagatt
      661 tggcacatag gcaaggcgtg gacaccgcca ttttcgccat gccccatacc cgtcgcgagc
      721 aagtggcaga gatcgtcgga gtagcgagca ttaggttccg acacgtcttg atcataccca
      781 acctcaacgg cgtcacgaac tcggcggtgg tggctagaga tctcgcgggc accttggcgg
      841 tggagatcaa gtacaacctt ctgaacccgt gggcgctgcg agcgaagcga atagcagata
      901 ttgtatccac cgcaatcggg ggagttttga tacttccgtt tatcctcgtg ctcgcacttc
      961 tcgttttcgc ggaatcggga ggacccgttt tctacaaaga ccgccgtatg ggccgagatg
     1021 gcaatctatt ctcgtgcgta aagttcagca ctatggtacc cgatgcggaa gccctgctgc
     1081 agcggatgat cgaaactgag cctgagttgc gggaagaata ctctaggtac cacaagctgc
     1141 gtgacgactc ccgtgttacc cgcgtcggcc ggtttttgcg taagaccagc ctggatgagc
     1201 taccgcagct ttggaacgtc ctacgcggag agatgagcct cgtcggtccc agaccctacc
     1261 tgccccgcga atccaaagag atcggaatca cacagagtga aatcctgcgc gtgccccccg
     1321 ggataaccgg accgtggcag gtcaccgggc gcaatcaagc ctccttcgat gagagggttc
     1381 agatggacgc ttgctacgtg cgggactggt ccgtatggtt ggaccttgtc ct
//
LOCUS       DASQSL010000945         3299 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_184825, whole genome shotgun sequence.
ACCESSION   DASQSL010000945 DASQSL010000000
VERSION     DASQSL010000945.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3299)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3299)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3299
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184825"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..501)
                     /locus_tag="VE844_09715"
     CDS             complement(<1..501)
                     /locus_tag="VE844_09715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008289807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC01618.1"
                     /translation="MISTLQALGRKGLRFFERLGRSHVFLAYTLRGIPAALWRLRLVV
                     AQVYVAGVLSIVIIVVSGLFVGMVLGLQGYNTLVDFGAEESLGILVALSLVRELGPVV
                     SALLFAGRAGSALTAEIGLMKTTEQLAAMEMMAVDPLQRVVAPRLLAGIFAMPLLAAI
                     FSAVGAY"
     gene            complement(498..1322)
                     /locus_tag="VE844_09720"
     CDS             complement(498..1322)
                     /locus_tag="VE844_09720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020159318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZC01619.1"
                     /translation="MDKLIASEEPLVQIRGLCFRRGGRVIFDHIDLDIARGKITAIMG
                     PSGCGKTTLLGMIGGQLRPHAGGVHVDGVEVAKLSRRALFTLRKRIGMLFQSGALFTD
                     LSVFENIAFPLREHTRLPESIVRHLVLMKLEAVGLRGARDLMPSQLSGGMARRVALAR
                     AIALDPMMILYDEPFTGQDPISMGVLVRLIQLMNEAMGITSIVVSHNVGETASIADHI
                     YVLSDGKIVGQGTPQELKETHSDWVRQFMEGLADGPVRFHYPAPPYTEDLLGRSAW"
     gene            complement(1326..1499)
                     /locus_tag="VE844_09725"
     CDS             complement(1326..1499)
                     /locus_tag="VE844_09725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010313533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZC01620.1"
                     /translation="MRILHTMLRVGDLERSIAFYTGVMGMRLLKGDGAVLSFVEDPDG
                     YKIELLEDPARAH"
     gene            complement(1553..2758)
                     /locus_tag="VE844_09730"
     CDS             complement(1553..2758)
                     /locus_tag="VE844_09730"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-phosphoerythronate dehydrogenase"
                     /protein_id="HZC01621.1"
                     /translation="MRITADPNIALAAEIFSTLGEISLIPGQSWTAAAVRDADILLVR
                     SVTRVDARLLEGSRVKFVGTATSGVDHIDTEYLKQKGIGFASAPGSNANAVAEYVLSA
                     LLVLAHEHAWSLAGMTVGIVGYGHVGSRLAELVRHLGLQCVLNDPPLKDLTAEARFLE
                     LEEAISADIVTLHVPLTTEGRYPTVRLLDEGKLSRLKSGAVLINTARGGVIDEPALIK
                     RLDQRPAITAVVDCWAHEPAIDTGLLSRVSLGTPHIAGYSFDGKVKATERLYRAVCRY
                     FGLHPKQPRQIASPPIKIIELGFADDDNAADSLRRAVLAGYDVRRDAKALKQLLSLPE
                     ERRPGYFDELRRHYPLRREFNRTRVIIPAHRPKLATTLRALGFQVQDPHPFPPPYPHS
                     IPPLDSGEG"
     gene            complement(2801..>3299)
                     /gene="secF"
                     /locus_tag="VE844_09735"
     CDS             complement(2801..>3299)
                     /gene="secF"
                     /locus_tag="VE844_09735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013221100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HZC01622.1"
                     /translation="IGVLIYVALRFESRLAVAALIATIHDTVVTAGLYTLTPWDFDLT
                     ILAALLTVIGYSLNDTIVVFDRIRENFRLMRTGTPVEVVNVSLNQTLSRTLMTGVTTL
                     MVLLALLIVGGELLRGFAVTVILGILIGTYSSIYVASPIALAMGLTKADLMPVKKEGV
                     VDNRP"
BASE COUNT          755 a         1044 c          891 g          609 t
ORIGIN      
        1 ataggcaccg actgcactga agatcgccgc aagcaaaggc atggcgaaga tcccggcgag
       61 gagcctcggt gctaccaccc gctgcagcgg gtccaccgcc atcatctcca tcgccgcgag
      121 ctgttcggtg gtcttcatca agccgatctc agcggtcagc gccgatcccg cccgcccagc
      181 gaaaagcagg gccgacacca ccggcccaag ctcgcgcacg agcgagagcg ccaccaagat
      241 cccaagcgat tcctctgcgc cgaaatcaac cagcgtgttg tacccttgca gcccgagcac
      301 catacctaca aacaggcccg aaaccacgat gatgacgatg gaaagcaccc ccgccacgta
      361 tacctgcgcc accaccagcc gcaagcgcca aagtgccgcg gggatcccgc gcagggtata
      421 agctaaaaat acatggctgc gcccaagccg ttcaaaaaac cgcagtccct tccggcccaa
      481 tgcctgtaac gttgagatca ccaggcgctc ctgcctaata gatcctcggt atagggaggc
      541 gcagggtaat ggaagcgtac cggcccatcc gccaggccct ccataaactg tcttacccag
      601 tcggagtgag tctctttgag ttcctgagga gtcccttggc ccacgatctt accgtctgag
      661 agcacataga tatgatcggc aatcgatgcc gtctccccga cattatggga gaccacgatg
      721 ctggtgatcc ccatggcctc attcatgagc tggatcaaac gcacgagcac ccccatggag
      781 atggggtcct gacctgtaaa tggctcatcg tacaggatca tcatcggatc cagcgcgatc
      841 gcccgggcca gtgctacacg ccgggccatg ccccccgaga gttggctcgg catgagatca
      901 cgcgcaccgc gtagtcccac cgcctcaagc ttcatcaaga ccagatgccg gacgatggat
      961 tcgggcagac gggtatgctc gcgcagcggg aaagcgatat tctcgaatac cgagagatcg
     1021 gtaaacagtg ccccgctctg aaataacatg ccgatacgct tgcgtagggt aaaaagcgca
     1081 cgccgcgaga gttttgccac ttccacccca tccacgtgga cgccgcctgc atggggacgc
     1141 aattggccgc cgatcatgcc gagcaaggtg gtcttgccgc aaccggaagg ccccatgatg
     1201 gcggtgatct tgccgcgggc aatgtccaga tcgatatgat caaagatcac ccgcccgccg
     1261 cgcctgaaac aaagcccgcg gatctggacc agcggctcct ctgaagcaat gagtttgtcc
     1321 accggctagt gggctctagc cggatcttcg aggagctcta tcttatagcc gtcgggatcc
     1381 tccacgaagg agagcactgc gccatcgcct ttcaatagcc tcatacccat caccccggtg
     1441 taaaaggcga tggatcgctc cagatcgccg acccgtaaca tcgtatgcag aatacgcatc
     1501 ttctaccctc cttctgtcaa taaattttac cccctccctc acacctcctc cctcaccctt
     1561 ccccggaatc aaggggaggg atggagtggg gataaggggg agggaagggg tgggggtctt
     1621 gtacctgaaa acccagggcc cttaatgtcg tagccaactt tggccgatgc gcggggatta
     1681 taactcgagt tcggttgaat tcccggcgca ggggataatg ccgccgtaac tcatcgaaat
     1741 agcctggtcg cctctcttca ggcaagctca agagctgttt gagcgctttc gcgtcccggc
     1801 ggacatcata accggctaaa accgcccggc gcaggctatc cgccgcattg tcatcgtctg
     1861 caaagcccaa ttcgattatc ttgattggcg gtgaagcgat ttgccgaggc tgctttgggt
     1921 gtaggccgaa atacctgcac accgcccgat agagcctctc tgtagcctta accttaccat
     1981 caaagctata gccggcaata tgcggtgtgc ccaggctcac cctactcaat aggccggtat
     2041 cgatcgccgg ctcatgcgcc cagcaatcca ccacggctgt tatcgccggg cgctgatcca
     2101 agcgcttgat caacgccggc tcatcgatca ccccgccgcg cgcggtgttg attaatacag
     2161 cccccgattt cagtcgtgat agcttgcctt catccaacaa gcgcacggtc ggatagcgtc
     2221 cctccgtggt cagcggcaca tgcagggtca cgatatccgc cgagatcgcc tcttctaatt
     2281 caaggaaccg cgcctcggcc gtgagatctt taagcggtgg gtcgttaagc acacactgca
     2341 gacccaagtg cctcactaac tccgccagcc gcgaccccac atggccgtag ccaacgatgc
     2401 ccacagtcat cccagccaac gaccaggcgt gctcatgcgc caacaccaac agggcgctca
     2461 gcacgtattc cgccactgca ttggcattgc tgcccggcgc actggcgaag ccgatcccct
     2521 tctgcttcag atactcggta tcgatatgat cgacaccgct ggtagccgtc ccgacaaatt
     2581 ttacccggct gccttcaagc aggcgtgcat cgactcgagt caccgatcgg accaggagga
     2641 tatcggcgtc tcgaaccgcg gctgcggtcc aggactgacc cgggatcaag ctgatctcgc
     2701 caagggtaga gaagatctcg gccgctaacg cgatattggg atcggcggtg atcctcacgg
     2761 gctcaggcca taaacagccg gaaaatcggg gtgatttggc ctagggccga ttatccacaa
     2821 caccttcctt cttgaccggc atgagatctg ccttggtcag acccatggcc agggctatgg
     2881 ggcttgccac atagatggac gaataggtgc cgatcaagat ccccaggatc acggtaacag
     2941 caaagccacg gagcagctca ccgccgacga tcaagagggc aagcagtacc atcaaggtgg
     3001 tcacccccgt catcagggtc cgtgataagg tctggtttaa cgacacgttg accacctcta
     3061 ccggggtgcc cgtgcgcatc agacgaaagt tctcgcggat gcggtcaaag acgacgatgg
     3121 tatcgttcaa ggaataaccg atcacagtca gaagtgccgc caggatagta agatcgaagt
     3181 cccacggggt cagggtatag agaccggcgg tcacaacggt atcgtgtatc gtggcaatga
     3241 gcgctgcaac cgcaagccgc gattcgaacc gcaaagccac gtagatcagg accccgata
//
LOCUS       DASQSL010000946         1288 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_102685, whole genome shotgun sequence.
ACCESSION   DASQSL010000946 DASQSL010000000
VERSION     DASQSL010000946.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1288)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1288)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1288
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102685"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            232..981
                     /gene="hisA"
                     /locus_tag="VE844_09740"
     CDS             232..981
                     /gene="hisA"
                     /locus_tag="VE844_09740"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002684612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003949 -
                     1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HZC01623.1"
                     /translation="MLLIPAIDLKDGKCVRLRQGRMDEDTVYSDDPVAMAEHWVEAGA
                     RRLHIVDLNGAIQGRPVNIQIIRRIAERLPKVPIQVGGGIRNEDTIQTYLDAGVSYTI
                     IGTKAVTAPHFVADMCMEFPGHIIVGLDIRDGKLAIEGWSKLSHNNVVDLAHRLEQEG
                     VAAFIHTDISRDGMMNGVNIEATVSLARTLAVPVFASGGITNLNDIRALCKVAHEGIE
                     GAITGRAIYEGTLDFRAAQRLADEAAAASAN"
     gene            981..>1288
                     /locus_tag="VE844_09745"
     CDS             981..>1288
                     /locus_tag="VE844_09745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011395285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HZC01624.1"
                     /translation="MGLAKRIIPCLDVDAGRVVKGVRFVAIRDAGDPVEIARRYDEQG
                     ADEVAFLDITASHDERETLVHVVEHVASQVFIPLTVGGGIRTLEDIRRLLNAGADKIS
                     "
BASE COUNT          275 a          340 c          395 g          278 t
ORIGIN      
        1 gctcatggcc gaagccgcag cattgaccgt gccgcttagg gtggagatcg gagtcggcca
       61 agattgggag gaagcccatt aaaaaggcat ggactataaa cctctatgtg ctaatatctt
      121 taataataga agaatttata aggttcagct tttctttatc cccgccgccg atagatttcc
      181 taatccccat ttccagtcta gcttccacta taagcgatta aagaacccat tatgttgttg
      241 attcctgcta ttgatttgaa ggatggcaag tgcgtgcggc tgcgccaggg tcgcatggac
      301 gaggataccg tctattccga tgatccggta gccatggccg agcactgggt cgaggcgggc
      361 gctcggcgct tgcatatcgt tgatctcaac ggcgcaatcc agggtcggcc ggtgaatatc
      421 cagatcatac gccgcatcgc tgaacgcttg ccgaaggtgc cgatccaggt cggcgggggt
      481 attcgcaatg aggatacgat ccagacctac ttggatgccg gggtcagcta tactattatc
      541 ggcaccaagg cggtgacggc gccccacttt gtcgccgata tgtgcatgga atttccgggc
      601 cacatcatcg tggggctcga tatacgcgat ggcaagcttg ccattgaagg ctggtccaag
      661 ctgtcccaca acaatgtcgt cgatctggcg caccgtctcg agcaggaggg ggtagcagcg
      721 ttcatccaca ccgatatcag ccgggatggt atgatgaacg gcgttaatat cgaagctacg
      781 gtgagcctgg cgcgcacgtt ggcagtgccg gtgttcgcct ccggcgggat cacgaacctc
      841 aacgatatac gagcgctgtg caaggtagcc catgaaggta tcgagggtgc gatcaccggc
      901 cgggctatct atgaggggac tttggatttt cgagcggccc aacgcctggc cgatgaagcg
      961 gcggcagcga gtgctaattg atggggcttg ccaagcgaat catcccgtgt ctcgatgtgg
     1021 atgccgggcg ggttgttaaa ggggtaagat tcgtcgctat ccgcgatgcc ggcgatccgg
     1081 tcgagatcgc ccggcgctat gatgaacagg gcgccgacga ggtggccttc ttagacatca
     1141 ccgccagcca cgatgagcgg gagaccctgg tgcatgtcgt cgaacatgtc gccagccagg
     1201 tgttcatccc gctgacggtc ggtggaggga tccgcaccct cgaggacatc cggcggctgc
     1261 tcaatgccgg cgccgacaag atcagtat
//
LOCUS       DASQSL010000947         1078 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_21892, whole genome shotgun sequence.
ACCESSION   DASQSL010000947 DASQSL010000000
VERSION     DASQSL010000947.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1078
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21892"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(189..851)
                     /locus_tag="VE844_09750"
     CDS             complement(189..851)
                     /locus_tag="VE844_09750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011563481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0018142 - protein-DNA covalent
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SOS response-associated peptidase"
                     /protein_id="HZC01625.1"
                     /translation="MCGRYTLRTSVETLAERFELDEYPSSISASYNIAPTQGVAAVIA
                     EDGKRKLEMLHWGLIPSWADDPSVGNRMINARGETVSTKPSFRKAFRNHRCLMLADGF
                     YEWQKTANGKQPYYIRMEDDSPFAFAGLWESWQNGKEIRSATIITTDANDVVAPIHDR
                     MPVILHPEDYELWLDPDFDEKEPLTTLLKPYPAEMMEAYPVSRRVNSPSNNEPSIIES
                     VA"
BASE COUNT          217 a          303 c          314 g          244 t
ORIGIN      
        1 aagatcgccg agtcatgaaa cagcgaggac cagtttggct tgatgcgtca gatcggcgcg
       61 gttgctgaga cggagcaata ggaggagcta gccccactac tgcattccgg tcccgccaac
      121 gcctcccccg cgcacccgac aatcccgatg atcgtctgca tcgtcgggtg gagttatcca
      181 ggatgaacct acgccaccga ctctatgatg cttggctcgt tgttggaggg gctgttgacc
      241 ctccggctca ccgggtaggc ctccatcatc tcggcagggt agggcttgag gagggtggtg
      301 agcggctcct tctcgtcgaa gtcaggatcg agccacagct cgtagtcctc agggtggagg
      361 atcaccggca tccgatcgtg tatgggagca accacgtcat tggcatccgt ggtgataatg
      421 gtggccgagc gtatctcctt gccgttttgc caactctccc acagccctgc aaaagcaaat
      481 ggagagtcgt cctccatgcg gatgtagtag ggctgcttgc cgtttgctgt cttctgccat
      541 tcgtagaagc cgtcggccag cataaggcac cgatggttcc tgaatgcctt acggaaagat
      601 ggttttgttg aaacggtctc accgcgagca ttgatcatcc tgttgcccac gctcgggtcg
      661 tcggcccaag aggggataag gccccagtgc agcatctcga gcttcctctt accatcctcg
      721 gctatcacgg ctgcgacccc ttgtgtgggg gcaatgttat agcttgcgct tatcgaggag
      781 gggtactcat ctagctcgaa gcgctccgcc aaggtctcta cggatgtcct tagagtgtac
      841 ctgccacaca tggatctaga cctcccctgc cgtcggcatg atgatctctc acctaattat
      901 acggcaggac acttagaaat ccctcagccg gatggatagc ccaggggcta tgatcaagcg
      961 tgctcaagtg agtggaaggt gaggtctccg aagttcattc ctaagatact gtgtagggcc
     1021 ggtccaacat ccatgagcat cccggctgac gaggtaggca ggtgctactt gggagcct
//
LOCUS       DASQSL010000948         2418 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_60229, whole genome shotgun sequence.
ACCESSION   DASQSL010000948 DASQSL010000000
VERSION     DASQSL010000948.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2418
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60229"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..230
                     /gene="fusA"
                     /locus_tag="VE844_09755"
     CDS             <1..230
                     /gene="fusA"
                     /locus_tag="VE844_09755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008933190.1"
                     /note="EF-G; promotes GTP-dependent translocation of the
                     ribosome during translation; many organisms have multiple
                     copies of this gene; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HZC01626.1"
                     /translation="GTVTGDLNRRRGILMGTDDSPAGRIIRAEVPLAEMFGYATDLRS
                     ATQGRATYSMEFSRYVEAPASIAEAVIKQSA"
     gene            265..1455
                     /gene="tuf"
                     /locus_tag="VE844_09760"
     CDS             265..1455
                     /gene="tuf"
                     /locus_tag="VE844_09760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011330929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HZC01627.1"
                     /translation="MSKGKFERTKPHVNVGTIGHVDHGKTTLTSALTLITSRRFGGEY
                     RAYESIDNAPEEKARGITIATAHVEYQSEQRHYAHVDCPGHADYIKNMITGAAQMDGA
                     ILVVSAADGPMPQTREHILLARQVGVPYMVVYLNKADMVDDAELLELVEIEVRELLDI
                     YKFPGERTPVIVGSALQALEGDAGELGEPSVWKLLRAMDEYIPLPERPVDQSFLLPIE
                     DVFSISGRGTVVTGRVERGKVKVGEEVEIVGLKATQKTTCTGVEMFRKLLDEGRAGDN
                     VGVLLRGTKREEVERGQVLCKPGSVKPHTHFEAEVYVLSKEEGGRHTPFFSNYRPQFY
                     FRTTDVTGAVELPAGVEMVMPGDNVKLVVKLIAPIAMEEGLRFAIREGGRTVGAGVVA
                     RIIE"
     gene            1475..1550
                     /locus_tag="VE844_09765"
     tRNA            1475..1550
                     /locus_tag="VE844_09765"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1508..1510,aa:Trp,seq:cca)
     gene            1609..1977
                     /gene="secE"
                     /locus_tag="VE844_09770"
     CDS             1609..1977
                     /gene="secE"
                     /locus_tag="VE844_09770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020508485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HZC01628.1"
                     /translation="MDAKAEFQGSRSDTLKLISALLIITLAIAGFYYYADQSLLVRVI
                     GLLVAAGIAVAIGFRTDQGRQLWEFLRDAQIEVHKVVWPTREETVKATLLVVLMVVVV
                     AIFLWLLDLLLGWLVRMLTG"
     gene            1996..>2418
                     /gene="nusG"
                     /locus_tag="VE844_09775"
     CDS             1996..>2418
                     /gene="nusG"
                     /locus_tag="VE844_09775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006747210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HZC01629.1"
                     /translation="MAFKWYVVHAYSGFETQVKRSLQERIQRSGLQDKFGEILVPTEE
                     VMEMRGEQRRRSERKFFPGYVLVQMEMNDETWHLVRDVPKVMGFVGGSGDRPAPISDK
                     EAEKILQRIQEGTDKPRPKILFEVGEVVRVKEGPFADFN"
BASE COUNT          507 a          508 c          872 g          531 t
ORIGIN      
        1 taggcacagt caccggtgat ctgaatcgcc gccgcggcat attgatgggc actgacgatt
       61 cccctgcggg aaggatcata cgtgccgagg tgccactggc tgagatgttt gggtatgcta
      121 ccgacttgcg atctgcaacc caagggcggg cgacctatag catggagttc tcgagatatg
      181 tggaggcgcc agcgagcatt gccgaggctg tcattaagca gagcgcgtaa gctagaaaaa
      241 actggactag aatgaggtgt agccgtgtcc aaggggaaat ttgagcgaac gaagccgcat
      301 gtaaatgttg ggacgattgg tcatgtggat catgggaaga cgacgctgac ctcggcgctg
      361 acgctgatca cctcgcgccg atttggcggg gagtatcggg cctatgagag tattgacaat
      421 gcgcccgagg agaaggcacg cgggatcacg attgccaccg cgcatgtgga gtatcagagt
      481 gagcagcggc actatgcgca tgtagactgt ccggggcatg cggactacat caagaacatg
      541 atcacgggtg cggcgcagat ggacggtgcg attttagtgg tgagtgcggc ggatgggccg
      601 atgccccaga cccgggagca tatcttgtta gcccgccaag tgggggtgcc ctacatggtg
      661 gtatacctga acaaggcgga catggtggat gacgcggagt tattggagct ggtggagatc
      721 gaggtgaggg agttgttgga catctacaag tttccggggg agcggacgcc ggtgattgtg
      781 gggagtgcgc tccaggcctt agagggggat gcgggggagc ttggggagcc ctcggtgtgg
      841 aagctgttga gagcgatgga tgagtacatt ccgctgcccg agcggccggt ggaccagtcg
      901 tttttgctgc ccattgagga cgtgttttcg atctcaggcc ggggtacggt ggtgacaggg
      961 cgtgtcgagc ggggcaaggt gaaggttggg gaagaagtgg agatcgtggg gttgaaggct
     1021 acccagaaga ccacctgcac cggggttgag atgtttcgga agctcctcga tgaggggcgg
     1081 gcgggggaca acgtgggggt gctgttgcgg ggcaccaagc gggaggaggt ggagcggggc
     1141 caggtgctgt gcaagcccgg gagtgtgaag ccgcacaccc attttgaggc ggaggtgtat
     1201 gtgttatcga aagaggaagg gggccggcac acgccgtttt tttccaatta ccggccgcag
     1261 ttttattttc ggacgaccga tgtgacgggt gcggtggagt tacccgcggg ggtcgagatg
     1321 gtgatgccgg gggataatgt gaagctcgtg gtgaagctga ttgcgccgat tgcgatggag
     1381 gaggggttgc ggtttgcgat ccgggaaggc ggccgcacgg tgggcgccgg cgtggtggcg
     1441 cggatcatcg agtgatttgc aagaccaaga acttaggcca gtagctcaat tggcagagcg
     1501 gcggtctcca aaaccgcagg ttgggggttc gagaccctcc tggcctgcca ttcagcataa
     1561 ttaaccaaat gttttcaaga cagtagggat gggggtattc gtttgtagat ggatgcaaaa
     1621 gccgaatttc aagggtcgag atcagacacg ttaaagctta tatcggccct tttaattatc
     1681 accctagcga ttgccggttt ttattactat gccgatcaat ccttattagt gagggtcatc
     1741 gggctgctcg ttgctgccgg tattgccgtt gctatcgggt ttaggacaga tcagggccgc
     1801 caattatggg aattcttgcg agatgcgcag attgaggtgc ataaggtggt atggccgacg
     1861 cgcgaggaga ccgtcaaggc gacactgttg gtcgtactga tggtggttgt ggtggctata
     1921 tttttatggt tgctcgacct cttgttgggc tggttggtgc ggatgctcac cgggtagaga
     1981 ggtgggttta tttacatggc gttcaagtgg tatgtggtgc atgcctactc gggattcgag
     2041 actcaggtga aacgctccct gcaagagcgg atccagcgga gcggcttgca ggataaattc
     2101 ggtgagatcc tggtccctac tgaagaagtc atggagatgc gcggggaaca gaggcgtagg
     2161 agtgagcgca agtttttccc ggggtatgtg ctggtgcaga tggagatgaa cgatgagacc
     2221 tggcatctgg tcagagatgt ccctaaggtg atggggttcg tcgggggtag cggtgaccgg
     2281 cctgcgccta tcagtgataa ggaggcggag aagatcctgc agcgcatcca agaagggacc
     2341 gataaaccac gtcccaagat ccttttcgag gtgggtgagg ttgtgcgggt caaagaaggt
     2401 ccgtttgccg attttaac
//
LOCUS       DASQSL010000949         1821 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_60230, whole genome shotgun sequence.
ACCESSION   DASQSL010000949 DASQSL010000000
VERSION     DASQSL010000949.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60230"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(218..400)
                     /locus_tag="VE844_09780"
     CDS             complement(218..400)
                     /locus_tag="VE844_09780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01630.1"
                     /translation="MKELTKDEVRGLGHAVGLEIQDPELTEVTYSLNALLEDLDQINP
                     PGLDKVEPLPILLPPS"
     gene            complement(683..1132)
                     /locus_tag="VE844_09785"
     CDS             complement(683..1132)
                     /locus_tag="VE844_09785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002118659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HZC01631.1"
                     /translation="MEVENKLKAMGLELPAAGAPPPGRAGAVKIGNILFVGGHTPGPA
                     YRGKLGAGFTVEQGYDGARQACLNCLADVKAVIGDLDKVKRVAKLLCMVNSAPDFGQQ
                     PLVANGATDLLRQLYGDAGAHARSAVGLAALPNGACIEIEMILEVED"
     gene            1632..>1821
                     /locus_tag="VE844_09790"
     CDS             1632..>1821
                     /locus_tag="VE844_09790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01632.1"
                     /translation="MDLPLLAWIGEGQAETEWHPPLSGRRQPTPHAHRCHGVRVSGGR
                     SMVTRLPRPLGGLQDALPG"
BASE COUNT          348 a          547 c          511 g          415 t
ORIGIN      
        1 ttcaggcggt caatgcgctc gaggtatcct tcaacgactt ccactggtga tacctggcga
       61 ctcttgataa gctcagacag ctgggatacc gacagaaaag ggatttcggc tttttccata
      121 atggcgtctc tccccgaatt gatcaggtcc ctccgactgg atgtcttgat ggcgggacct
      181 tggcgaacct gtaacgccgc gcgaccagac cggtggccta gctcggtggc aggaggatgg
      241 gcaaaggttc gaccttatcc agcccgggag ggttaatttg gtccagatct tccagaaggg
      301 cattgaggct gtaggtgact tcggtcagct ccgggtcctg aatttcaagt cccaccgcgt
      361 ggcccaaacc ccgcacctca tctttggtca attccttcat accagcctcc cttggcttga
      421 gggtaggaac tcacctatgg cccagtgggt gagagtatcg gttgggtaga gaccccgaac
      481 ctctcacctg gggatataca caattcatgg gaagcgcggg tgcgtttctt tcacgacttg
      541 aacatctcgc agcaaccttt gaggcgatgg ctcagtttgg tgccagccat cctcaaggtc
      601 gctccgatca tcacgcctaa gcaggcagtg gtaccaacgg cgacgatctt ccccgtttcg
      661 aggttaactt agagtgctga ggctagtcct cgacctccag gatcatctca atctcaatgc
      721 aggcgccgtt gggcagcgct gccaagccca ccgcggacct ggcatgggct ccggcatcgc
      781 cgtagagctg gcgcagaagg tcggtggctc cgttcgccac caggggttgc tggccgaaat
      841 caggggcgga gtttaccatg cacagcagct tggccacccg tttcacctta tccaagtcgc
      901 ctatgacggc cttcacgtcg gctaaacagt tgaggcaggc ctgccgtgcc ccgtcgtaac
      961 cctgctccac cgtaaaaccg gctcccagct ttccccggta cgccggtccc ggcgtgtgcc
     1021 cgcccacgaa cagtatgttt ccaattttga ccgcgccggc tcggccgggc ggtggtgccc
     1081 cggcggcagg tagctccagt cccatggctt tcagcttgtt ctcgacttcc atcctattcc
     1141 tcctcttatg ccggaacgac tccggctggt tttaatgtaa tggacccgcc accttggcag
     1201 aatagcgctg aggagccaga atgatttcct ctgacccgga aatcattcga ccagaggagg
     1261 cgagtccaat gcagcagcat cttagcgggt tccgtcgcaa atttttattc aaggccattt
     1321 cgggtatgat cttcgcttgt gtcgcgtgaa gctctgcgtg attcttagga gcctatcatc
     1381 gcgccttgca gcctgtggtc caaccccaga ttggcctaaa ttgcagctac gctgtcacag
     1441 ggccatcaag gcgtgacctg taatccgcca aaggccaaga gccatctatc gataagcagc
     1501 tcctggaaaa ttcgagttga aaaggctttg cgctggtatc tcctctatat ctagaatttt
     1561 cgcgttgcgg ctgtcaatat cttgtagcct aaaaccgcgc ttggctcatc gtcgcttttg
     1621 gtgaaccagg gttggacctc ccccttttgg cgtggattgg cgagggccag gcggagaccg
     1681 aatggcatcc ccctctctcc ggccgcaggc agcccacgcc acacgcccac agatgccatg
     1741 gtgtgcgggt gtccgggggc cgcagcatgg tcacccgttt gccgcggcct ctaggcggcc
     1801 tgcaagacgc gttgccgggg g
//
LOCUS       DASQSL010000950         1288 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_7689, whole genome shotgun sequence.
ACCESSION   DASQSL010000950 DASQSL010000000
VERSION     DASQSL010000950.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1288)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1288)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1288
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7689"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            12..>1288
                     /locus_tag="VE844_09795"
     CDS             12..>1288
                     /locus_tag="VE844_09795"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HZC01633.1"
                     /translation="MRRRLQDIGGWTPEQIAGKRWNIGCVALEITQRCNLDCTLCYLS
                     DASEAVKDVPLQEVFRRIEMIYQHYGENTDVQVTGGDPTLRNQAELVQIVQRITARGM
                     RASLFTNGIRATRVLLAALSEAGLTDVAFHVDLTQQRKGYGSEAELNVVREHYIERAR
                     GLPLSVFFNTTVFEGNFHEIPALVRFFRKHADVVRLISFQLQADTGRGVLRARDADIT
                     PETVTEQINRGAGTPLRFDTFTVGHPRCNRYAMAFEINGHLYDFFNDPGFIVPLMNQT
                     VQVPFDRRNRRSAVHVALQAFSKTPGLWWKGVRWLSRTLWAARSDLWAARGRINKLSF
                     VIHNFMDACRLERERVHGCVFMVASPDGPISMCMHNAKRDAYILQPLRVATAEGERLW
                     DPLTGVTPAGEVAKVSFPSRALALHDLPRKFLRG"
BASE COUNT          254 a          392 c          375 g          267 t
ORIGIN      
        1 gtggcgaggc catgcgcagg cgcctccaag acatcggcgg ctggacgcct gagcagatcg
       61 caggcaagcg ctggaacatc ggctgcgtgg cgctcgaaat cacccagcgc tgtaatctcg
      121 actgcacgct gtgctatctc tcggatgctt cagaggcggt caaggatgtg cccctccagg
      181 aagtctttcg ccgcatcgag atgatatatc agcactacgg agagaatacg gacgtacagg
      241 tgacgggcgg cgatccgacg ctccgaaacc aagccgagct cgtccagata gtgcagcgga
      301 tcaccgcaag aggtatgcgg gcttcgctct tcaccaacgg catccgtgct acacgcgtgc
      361 tgctcgcagc gctctctgag gcggggctca ccgatgtcgc cttccacgtc gatttaacgc
      421 agcaacggaa aggctatggc tcggaagcgg agctcaacgt agtccgagag cactacatcg
      481 aacgcgcgcg gggcttaccg ctttcagtgt tttttaacac cacggtcttc gagggtaatt
      541 ttcatgaaat cccagcgcta gtgcgtttct ttcgcaagca cgccgatgta gtgcggctga
      601 tctcgtttca attgcaagcc gataccggcc gcggcgtgct gagagcgcgc gatgccgata
      661 tcactccaga aaccgtgact gaacagatca acagaggcgc cggtacccct ctgcgcttcg
      721 ataccttcac ggttgggcac ccgcgctgca atcgatacgc gatggcgttt gaaatcaacg
      781 gccatctgta cgacttcttc aacgatccgg gctttatcgt gccgttgatg aatcagaccg
      841 tacaggtacc gttcgaccgc agaaatcgcc gctccgctgt ccatgtcgcg ctccaggctt
      901 tttccaagac cccggggctt tggtggaaag gtgtgcgctg gctaagccgg accttgtggg
      961 cggcccgatc ggatctctgg gccgcccggg gccgcatcaa taagttgtcg tttgtcatcc
     1021 ataacttcat ggatgcctgc cggctcgagc gtgaacgcgt gcacggatgc gttttcatgg
     1081 tggcctcgcc cgatggcccc atctcgatgt gtatgcacaa cgccaagcgg gatgcctata
     1141 ttctccaacc cctcagggta gcaaccgcgg aaggcgaacg gctgtgggat cctttaaccg
     1201 gtgtgacccc ggctggcgaa gtcgctaagg tctcgtttcc gagccgtgcc ctcgctctgc
     1261 acgacctccc ccgcaaattc ctcagggg
//
LOCUS       DASQSL010000951         1296 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_21944, whole genome shotgun sequence.
ACCESSION   DASQSL010000951 DASQSL010000000
VERSION     DASQSL010000951.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1296
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21944"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..610
                     /locus_tag="VE844_09800"
     CDS             <1..610
                     /locus_tag="VE844_09800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01634.1"
                     /translation="ARQRTVAAREEAEQAEAERYAPGPLSRAIAAQGDAEQRWQAQNY
                     ERTAERYERACQLYEAARVEAEEERGRQQAEEARRQAEEMQKAVEEAEAQRYTQEFYE
                     RAEEAMRQGEQSLNANRWEEATNEFVKARGLFDESLEIAKRAKAKQAAEAARDSSLVE
                     QRKVQGRGASAFSGWICRGRRSTASGGAEVKSGRLWYSAGDL"
     gene            complement(879..>1296)
                     /locus_tag="VE844_09805"
     CDS             complement(879..>1296)
                     /locus_tag="VE844_09805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01635.1"
                     /translation="DPTYSCFAYLKLPGYAFGGLMMALGVWKIALLNGGLPQDGETGY
                     YGLQDSLCLRMVGIQAQDLSGIHNGVITLRGNEPVGLKGPLGLVEEHENLTVRWRWCE
                     IEHNDYGKQTKDGYRVKIGTGNESDLALWRRGKESL"
BASE COUNT          326 a          323 c          427 g          220 t
ORIGIN      
        1 tgcccggcag cggactgtgg ctgcaagaga ggaggcggaa caggcggagg ccgagcggta
       61 tgcgcccggg ccattgagcc gggcaatagc cgcacaagga gatgctgagc agcggtggca
      121 ggcgcagaac tatgaacgga cggcagagcg gtatgagcga gcctgtcagc tgtatgaggc
      181 ggcgcgggtc gaggcagagg aggagcgggg tcgtcagcag gccgaagagg cgcggcgtca
      241 agcagaagag atgcagaagg cggtagagga ggcggaagcg caacggtata cccaagagtt
      301 ctatgaacgg gcggaagagg caatgcgaca aggggaacag agcctcaatg ccaatcggtg
      361 ggaggaggca accaacgagt ttgttaaggc aagagggctt tttgacgaaa gccttgagat
      421 tgccaagcgg gcaaaggcaa agcaggccgc tgaagcggcg agggatagct ctctggtcga
      481 acagagaaaa gtacaaggaa gaggggcctc agctttttcc ggatggattt gcagaggccg
      541 tcgctctact gcgtcaggcg gagcagaagt taaatcagga agactatggt acagcgcagg
      601 cgatctttga gagaagtacg gccctgtttc ggcagatctg cgatgaggcg gtagtttatc
      661 tccaaagaga gcaagcgaaa gaggtcagag cccgtgtcca caaggttcaa gaaaggatct
      721 cgaacgtaaa gaaggggtgg cagcagaggc taaagaaggg gtggcagcag aggcgtgcgc
      781 acaagaccct tgagcaaggc gatcgcttat tccagcaaga gagctacgcg gaggcgcggg
      841 taaagtacca agaagcagtc tcccttttta gtgcgctgct agaggctttc cttaccccgc
      901 cgccagagcg caagatcgct ctcgtttccc gtccctatct ttacgcggta tccatccttg
      961 gtttgctttc cgtagtcatt gtgctctatc tcgcaccacc tccatcttac cgtgagattc
     1021 tcgtgctcct caacaaggcc caacgggccc ttgaggccaa ccggctcatt gccccggagg
     1081 gtgataacgc cgttatgtat tccagagaga tcctgggcct ggatgccaac catgcggagg
     1141 caaagcgaat cctggagacc gtagtatccc gtctcaccat cctggggaag accgccgttc
     1201 agcagggcga tcttccacac gccaagagcc atcatcaggc cgccgaaggc atagcccggc
     1261 agtttaagat aagcgaaaca ggagtacgtc ggatcg
//
LOCUS       DASQSL010000952         1997 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_144685, whole genome shotgun sequence.
ACCESSION   DASQSL010000952 DASQSL010000000
VERSION     DASQSL010000952.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144685"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..362)
                     /locus_tag="VE844_09810"
     CDS             complement(<1..362)
                     /locus_tag="VE844_09810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015043821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HZC01636.1"
                     /translation="MAAEARLFGTDGVRGLANHYPVTPEMAFALGRAGAEHLRGKHAA
                     KGMIVVGRDTRLSGDMLEAAICAGICAAGVDAMQVGIMPTPAIAYLTRTWGALGGVVL
                     SASHNPFEDNGIKFFSGDG"
     gene            complement(352..>1997)
                     /gene="ftsH"
                     /locus_tag="VE844_09815"
     CDS             complement(352..>1997)
                     /gene="ftsH"
                     /locus_tag="VE844_09815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013249264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HZC01637.1"
                     /translation="RTYAPKDPELIPTLRKQGVRIQAEPPEKTSWYVNLFISWFPMLL
                     LLGVWIFFMRQMQSGGSKALSFGKSRAKLSSEKGRKVTFKDVAGVDEAKEEVVELIEF
                     LKDPQKFQHLGGKIPKGVLLVGPPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGV
                     GASRVRDLFDQGKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFE
                     SNDGVILIAATNRPDVLDPALLRPGRFDRQIVVPRPDVRGREEILRVHARNIPLSKDV
                     ELAVLARGTPGFSGADLSNLVNEAALRAARLNKKLVDMGDFEEAKDKVIMGAERRSMI
                     ISDAEKKITAFHEAGHTLVAKLLPGSDPVHKVTIIPRGLALGLTQQLPVDDRHTYPKE
                     YLLNNLSIMMGGRAAEELVFKQITTGAGNDIERATELARKMVCEWGMSERMGPLAFGK
                     KEEQIFLGREIAQHRDYSELTAQAIDAEVNRLVMENYQRAKDLLQRHIDKLYLLAEGL
                     LEREVLEGPEIEAIVHNGTHGGSPDHGAALTAEDEVRGC"
BASE COUNT          392 a          621 c          560 g          424 t
ORIGIN      
        1 ccatcgcccg agaaaaattt tatgccgtta tcctcaaagg gattgtggga ggcggaaagc
       61 accacccccc ccagtgcgcc ccaggtccgg gtgagatagg cgatggcggg cgtcggcatg
      121 atgcccacct gcatggcatc cacccccgcc gcacagatcc cagcgcagat cgccgcttcc
      181 agcatgtctc ctgacaggcg tgtatcgcgg ccgacaacga tcatcccttt cgcagcgtgc
      241 ttcccccgga gatgctcggc cccagctcgt cccagagcga aggccatttc tggggtgacg
      301 ggatagtgat tggccaagcc gcgcacccca tcagtgccga aaaggcgagc ttcagcagcc
      361 acgaacttcg tcctcagcgg tcagcgctgc tccgtgatcg ggggaaccac catgagtgcc
      421 gttatggaca atggcctcga tctctggccc ctccaacacc tcgcgctcca gtaatccttc
      481 ggccagcagg tataatttgt cgatgtggcg ttgcagaaga tccttggcgc gttgatagtt
      541 ctccatcact aaccggttca cctctgcgtc gatcgcttgg gcggtcaact cgctatagtc
      601 acggtgttgt gcgatctccc gccccagaaa aatctgctct tccttcttgc cgaaggccaa
      661 ggggcccatg cgctcgctca tcccccactc gcataccatc ttgcgcgcca gttcggtggc
      721 gcgttcgatg tcgttgccag cgcccgtggt aatttgctta aacaccaatt cctcggccgc
      781 gcgtcccccc atcatgatgg agagattgtt caagagatac tctttggggt aggtgtggcg
      841 atcgtcgaca gggagttgct gggtcagtcc aagcgccaac ccgcgcggga tgatcgtcac
      901 tttgtgcacc gggtcgctgc cgggaaggag cttcgcgaca agggtgtgcc cggcttcgtg
      961 aaaggccgtg atcttctttt ccgcgtcgct gatgatcatg ctacgacgct cggcccccat
     1021 gatgactttg tccttggctt cctcaaagtc gcccatatcg accaattttt tgttcaggcg
     1081 cgcggcgcgc aacgccgctt cgttcaccag gttggacaaa tcggcccccg agaatccggg
     1141 cgttccacgg gcgagaacgg ccagctccac gtccttcgat agggggatat tgcgggcatg
     1201 cacgcgcaag atctcttcgc gccctcgcac gtcgggacgg ggcacaacga tctggcgatc
     1261 gaaccgcccc ggacgcaaca aggctggatc taacacatcg gggcggttcg tggcggcgat
     1321 caagatcacg ccatcgttgg attcaaaccc atccatctcc accaggagtt ggttgagggt
     1381 ttgttcgcgc tcgtcgtggc ccccgccaag tcctgcgccg cgatgacggc ccacggcgtc
     1441 gatttcgtcg atgaaaatga tacacggcgc gtgttttttc ccctggtcga agaggtcgcg
     1501 cactcgcgat gcaccaacgc cgacgaacat ttccacgaaa tcggaaccgc tgatgctgaa
     1561 aaaagggaca ttagcctcgc cggcaatcgc tcgcgccagt aacgtcttgc ccgtaccggg
     1621 cggccctact aatagcacgc ctttagggat tttgcccccg aggtgctgaa acttctgggg
     1681 atctttcaga aattcgatga gctcgacgac ttcctctttg gcctcatcga ccccggcgac
     1741 gtctttgaag gtgaccttgc ggcccttctc ggaactgagc ttcgcacgac tcttgccaaa
     1801 ggaaagggct ttgctcccac cgctctgcat ctggcgcatg aagaatatcc acacccccag
     1861 caagaggagc attgggaacc aggaaatgaa caaattcaca taccaggaag tcttctcagg
     1921 aggttcggct tggatgcgaa caccctgttt acggagggtc ggaatcaatt ccgggtcttt
     1981 gggggcatag gttcgaa
//
LOCUS       DASQSL010000953         3012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_32337, whole genome shotgun sequence.
ACCESSION   DASQSL010000953 DASQSL010000000
VERSION     DASQSL010000953.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3012
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32337"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..1647
                     /locus_tag="VE844_09820"
     CDS             133..1647
                     /locus_tag="VE844_09820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017718172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate--CoA ligase family protein"
                     /protein_id="HZC01638.1"
                     /translation="MWPLQRNRAQGAFERFLNTSLDTVLERHLSISAISQALSLFRDV
                     VDSVPAYSTFLKEQGIDPAAIQTAEDFAALPLLTKQNYLLRYPLKDLCRQGRIETCDM
                     IAVSSGSTGQPTFWPRFVTDEFSIATRFEQVFHDSFKADTRRTLAVVCFALGTWVGGM
                     YTANCCRHLAAKGYPITSITPGNNKEEILRVIEALAPNFEQVVLLGYPPFIKDIVDTG
                     LARGINWSKYAIKLVFAGEVFSEEWRALVGERVGSPDLYYDFASLYGTADAGVLGNET
                     PLSICIRRFLAEHPKAAREIFGESRLPTLVQYDPSSRYFETEQRTLLFTGDNGIPLIR
                     YHISDEGGLIPYETMRRFLADWRFEPVTELKRCGERGIRSLPFAFVFGRSHFVISYFG
                     ANIYPENVTVGLEQPGIRAWVTGKFVMQVKEDLDRNRFLSVVVELAPGEAASEERCAC
                     LADAILKQLRRLNSEFANYVPVEYQTPRITLKPLGDPEWFPPGVKHRYTRPDAV"
     gene            1644..2156
                     /locus_tag="VE844_09825"
     CDS             1644..2156
                     /locus_tag="VE844_09825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01639.1"
                     /translation="MTWHKILYLSITALMVWGDAVEARMYQWINPASGRTQLSGKPPA
                     WYRGKTEGPRVFVFENGRLIDDTAREVSETERQSLRTQAFERVGQQPIISKEELNTPQ
                     KTALPMDAPPAAQDTPEAHPPSLKEQTPTTLIERLKKIIADWDKRKEEEAKRLLETLP
                     GPNSPSLPAK"
     gene            complement(2158..>3012)
                     /gene="phoR"
                     /locus_tag="VE844_09830"
     CDS             complement(2158..>3012)
                     /gene="phoR"
                     /locus_tag="VE844_09830"
                     /inference="COORDINATES: protein motif:HMM:TIGR02966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon sensor histidine kinase PhoR"
                     /protein_id="HZC01640.1"
                     /translation="GKREAGESTIEIPSPVKQGAYLSLRVVAMGKDQRLFVARDVTRL
                     HRLNEIRKDFVTNVSHELRTPVTVLSGYLETLNTDRDCAPEAWHPVIDHMLSQTTRMK
                     YVIEDLLLLSRLEQEDSVPKPSVVSVAEMLNSIYQEAQALDGKRRHMFSLELDPDLLI
                     IGSPTELYSAFSNLVLNAVHYTPENGVIWIRWYRDAQGAHMEVTDTGVGIPAHHIPRI
                     TERFYRVDQSRSRESGGTGLGLAIVKHILIRHKASLHIESTVGKGSTFRCDFPAELVA
                     TSAQEAQR"
BASE COUNT          655 a          875 c          818 g          664 t
ORIGIN      
        1 gagggcctat gccggtggca ccaagacacc gaggtggcgc tgcaggcggc gagtctattg
       61 cggagatggg tgacagaggg gtgggtggcc ggtattgaca ctgcccccga aatcacccta
      121 ggagcatagc gtatgtggcc acttcaacgt aatcgggccc aaggtgcctt cgaaagattt
      181 ctgaacacat cccttgacac ggtacttgaa cggcatctca gtatttccgc catcagccaa
      241 gccctgagcc tctttcgaga tgtcgtggat tccgtgcccg cctacagcac tttccttaag
      301 gaacaaggta tcgaccccgc tgcgattcaa acggcagagg actttgcagc gctgccactt
      361 ttgaccaagc agaattatct cttgcgttat cccttgaagg atctctgccg gcaggggcgg
      421 atcgagacct gcgacatgat tgctgtctcc tccggctcga ccggtcagcc taccttctgg
      481 ccgcgatttg tcaccgatga attttcgatc gccacccgct tcgagcaggt cttccacgac
      541 agctttaagg ccgacacacg ccgtaccctc gcagtggtct gctttgcact tgggacctgg
      601 gtgggaggca tgtacaccgc gaactgttgc cgccatctcg ccgctaaagg ttatcccatt
      661 acctcaatta cccccggcaa taacaaagag gagatcctcc gcgttatcga ggccctcgcc
      721 ccgaattttg agcaggtggt attacttggc tacccgccgt tcatcaagga tatcgtggat
      781 acgggcctcg cccgcggcat taactggtcc aagtatgcga tcaagctcgt cttcgctggc
      841 gaggtcttca gcgaagaatg gcgggccctg gtcggcgagc gggtgggatc ccctgatctt
      901 tactacgatt tcgcctccct ctatggcacc gcggatgcgg gcgtcttggg caatgaaacc
      961 ccattgtcta tttgcatccg ccgcttcctg gccgagcacc ccaaagcggc acgcgagatc
     1021 ttcggcgagt cgcggctacc gaccctggtg caatatgacc cttcaagccg ctattttgag
     1081 actgagcaga gaaccttgct ctttaccgga gataatggga tcccgctgat ccgctaccat
     1141 atctccgatg aaggcggcct tatcccctat gagacgatgc ggcgttttct cgctgactgg
     1201 cgcttcgaac ccgtgactga gctcaaacgc tgcggtgagc gggggatccg atcgctgccc
     1261 ttcgcctttg tttttggacg ctctcacttt gtgatctcct atttcggggc gaatatctat
     1321 cccgagaatg tgacggtagg gctggagcaa ccggggatcc gggcgtgggt taccggtaaa
     1381 ttcgtcatgc aagtcaagga ggatctcgat cgtaaccggt ttttgtcagt ggtggtcgaa
     1441 ttagcgcccg gcgaagccgc gagcgaggaa cggtgcgcct gcctggcaga cgcgatcctc
     1501 aagcaattgc gccgcttaaa cagcgagttt gcgaattatg tgccggtcga atatcaaacc
     1561 ccacgcatta ccctcaagcc cctcggtgat cccgagtggt ttcccccagg cgtcaaacac
     1621 cggtatacac ggccagacgc agtatgactt ggcataagat cctgtatctt tctattaccg
     1681 ccttgatggt ctggggggat gctgtggaag cgcgcatgta tcagtggatc aacccggctt
     1741 ccggccggac ccagttatcc ggtaaaccac ctgcctggta tcggggcaag acagagggtc
     1801 cccgggtatt cgtattcgag aacgggaggc tcatcgatga tacggcgagg gaggtttccg
     1861 agacggaacg gcagagctta cggactcaag cctttgaacg agtaggacag caaccgatca
     1921 taagtaagga ggaattgaac acaccccaaa aaaccgccct accaatggat gcgccacccg
     1981 ctgcgcaaga caccccggag gcgcatccac cttctcttaa agaacaaact cctaccaccc
     2041 tgatcgaacg cttgaagaag atcatcgccg attgggacaa gcgcaaagag gaagaagcca
     2101 agcgcctgct tgaaaccttg cctggtccaa actccccttc ccttccagcc aaatagatca
     2161 tctttgcgct tcctgcgcgg aggtcgcgac aagctcagcg ggaaaatcgc agcggaaggt
     2221 gctgcctttt cctaccgtac tctcgatatg gaggctcgcc ttatgccgga taaggatatg
     2281 ttttacgatc gcaagcccaa gtcctgtgcc accactctcg cgtgaccggc tctgatccac
     2341 ccgatagaaa cgctcggtga tcctggggat atggtgtgcc gggatcccga ctcccgtgtc
     2401 agtgacctcc atatgggcac cctgggcatc gcggtaccaa cggatccaga tcacgccgtt
     2461 ctctggagtg tagtgcaccg cattgagtac aagattggaa aatgcgctgt ataactcggt
     2521 cggtgaaccg attattaaca gatccggatc gagctccagg gaaaacatat gacggcgctt
     2581 gccatccaga gcctgagcct cctggtaaat actattgagc atctccgcca cgctgacgac
     2641 tgaaggcttg ggcacagaat cttcttgttc caatctcgac agcagcagca gatcctcgat
     2701 cacatacttc atgcgggtcg tttggctcaa catgtggtca atcacaggat gccacgcttc
     2761 aggggcacag tcgcgatcgg tgttcagggt ctcgagatag ccactgagaa cagtcacagg
     2821 ggtacgtagc tcatgggata cattggtgac aaaatccttg cggatctcat tcaagcggtg
     2881 cagtcgcgtc acatctctcg ccacaaacag gcgttgatcc ttgcccatag ctaccactcg
     2941 gagactcaag taggcacctt gtttaacggg ggacgggatc tcgatggtgc tttctcccgc
     3001 ctcccgtttc cc
//
LOCUS       DASQSL010000954         1671 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_144690, whole genome shotgun sequence.
ACCESSION   DASQSL010000954 DASQSL010000000
VERSION     DASQSL010000954.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1671
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144690"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1380)
                     /locus_tag="VE844_09835"
     CDS             complement(<1..1380)
                     /locus_tag="VE844_09835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015259240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease N-terminal domain-containing
                     protein"
                     /protein_id="HZC01641.1"
                     /translation="MRPDRMTTTFQTALAEAQSLALGRDHQFIEPLHVMTVLLDQEDG
                     SVQPLLLQAGVNVNLVRTRLGQALDRVPRVEGIGGEVLIARDLEWVLNLMDKLAQSRK
                     DRYVSSELFVLAALEDRGQLGEILRQAGANPQRIARAIEAMRSGQRIEDPSAEEQRQA
                     LERYTIDLTRRAEQGKLDPVIGRDNEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LASRIVNGEVPEALKGKRLLALDMGALIAGAKFRGEFEERLKAVLKDLAKHEGRIILF
                     IDELHTMVGAGKAEGAMDASNMLKPALARGELHCIGATTLDEYRHSIEKDGALERRFQ
                     KILVDEPSVEDTIAILRGLKERYEVHHGVEITDPAIVAAATLSHRYISDRQLPDKAID
                     LIDEAASRISIEIDSKPEAMDRLERRLIQLKIEREALKKETDESSRRRLQNLETEVAR
                     VERDYSELEA"
     gene            complement(1461..>1671)
                     /locus_tag="VE844_09840"
     CDS             complement(1461..>1671)
                     /locus_tag="VE844_09840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZC01642.1"
                     /translation="ATQRGVIRLIAASTIGTTIEFYDFFLYANAAALVFNKTFFLVKH
                     ENLAIGQNHFTQPQGACFWHNYGAY"
BASE COUNT          292 a          520 c          487 g          372 t
ORIGIN      
        1 cgcttcgagc tccgagtagt cgcgttcgac ccgggcgacc tcagtttcca ggttttgcag
       61 gcgccgccgg gaggactcgt cggtctcttt tttgagggcc tcgcgttcga tcttgagctg
      121 gatcaagcgc cgctcgagcc tgtccatcgc ctcgggcttc gagtcgatct cgatgctgat
      181 ccggcttgcg gcctcatcga tgaggtcaat ggccttgtcc ggcagttgcc gatcgctgat
      241 atagcgatgg gacagcgtcg ctgcagcgac gatcgccgga tcggtgatct ctacgccgtg
      301 atggacctca tagcgttcct tgagcccccg gagaatagcg atggtatcct ccaccgacgg
      361 ttcatccacc aggatcttct ggaaacggcg ctcgagcgca ccatctttct cgatagagtg
      421 ccggtattca tcgagcgtgg tggcgccgat gcagtgcaat tcaccccgcg ccagggccgg
      481 tttcaacata ttgctcgcat ccatagcacc ctccgccttg ccggcaccga ccatggtgtg
      541 cagctcgtcg ataaagagga tgatccggcc ttcgtgtttg gccagatcct tgagcacggc
      601 tttgagccgc tcctcgaact cgccacggaa cttggcccca gcgatcagcg cacccatatc
      661 gagcgccaac agacgcttgc ccttcaaggc ctcgggcacc tcgccgttga cgatgcggct
      721 cgccaggccc tcaacgatcg cggtcttgcc caccccgggc tcgccgatca agaccggatt
      781 gttcttggta cgccgctgca gtacctgaat cgtgcgccgg atctcattgt cgcgcccgat
      841 gaccgggtcc agtttgccct gttcggcacg ccgggtgaga tcgatcgtat agcgctccag
      901 ggcttgccgc tgctcctcgg cggacggatc ctcgatccgc tgcccgctgc gcatagcctc
      961 gatagccctc gctatccgtt gcgggttggc gcccgcttgc cgcaagatct cgccaagctg
     1021 tccccggtct tccagggccg cgagcacaaa caattcactg gagacatagc ggtccttacg
     1081 actctgggcc agtttatcca tcaggttcag cacccattcg agatcccgcg cgataagcac
     1141 ctctccaccg ataccttcga cccgcggcac gcgatccagg gcctgtccca agcgggtgcg
     1201 caccaggttg acgtttacgc ccgcctgcag gagcaagggc tgcacgcttc cgtcttcttg
     1261 atcgaggagc acggtcatca catgcagcgg ttcgatgaat tgatgatcac gcccaagggc
     1321 gagactctgg gcctcggcca gggctgtttg aaacgtggtg gtcattcggt cgggtcgcat
     1381 gaggggcatt ttctcgggct gtttgggtgg gttttatcga gtacaatctc ttagattaca
     1441 tgagggcgtt tcctcagaat tcaataagct ccgtagttgt gccaaaaaca agcgccctgt
     1501 ggctgtgtaa aatggttctg gcctatcgcc aaattctcgt gttttaccaa gaagaaggtc
     1561 ttgttgaaca ccagcgcggc ggcgttcgcg tagaggaaga agtcgtagaa ctcgatggtg
     1621 gtgccgatgg tgctggccgc tatgagccgg atcaccccgc gctgcgtcgc t
//
LOCUS       DASQSL010000955         1747 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_32383, whole genome shotgun sequence.
ACCESSION   DASQSL010000955 DASQSL010000000
VERSION     DASQSL010000955.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1747
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32383"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1433
                     /locus_tag="VE844_09845"
     CDS             <1..1433
                     /locus_tag="VE844_09845"
                     /EC_number="1.2.7.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR03121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="formylmethanofuran dehydrogenase subunit A"
                     /protein_id="HZC01643.1"
                     /translation="PEDHRLDVHPGTPFTRSGTGGIVPSTFATGYRYATLGYTTAMEA
                     AVPPIGARHVLEEMHDTPVIDKGFYVLLGNNVFLYRLLKEGRMDEFRQAVAWWVNSTK
                     AYGVKLVNTGSDELWKGRRNANITDLNETIDNFGLTPLQIIKAFIETVNALGLPHPPH
                     IHCNNLGQSGNYTTTLDTMRAAEDQRVHIAHIQFHSYGGELGKNPTSKAAEIIDYLNR
                     HPKITADVGQVMFGKATAMTADAPLAYMLRRISGNKWANADTECESGCGIVPFSYQER
                     VYMHALQWAIGLELFLLSKDPWRLVLSTDHPNGGSFMMYPRLIRLLMDREFRNEQIHQ
                     VNQRAIRKTVLSDLSREYTLQEIAIITRAGPARALGLQHKGHLGIGADADLTLYEEHE
                     DKEKMFSTPRYVIKDGQLIIEDYEFRADHEGRILHVAPDYDPEIEKAIKPFFEEFYSI
                     RFDNYAVPDHYLHHQQVIPTTHQAAS"
     gene            1459..>1747
                     /locus_tag="VE844_09850"
     CDS             1459..>1747
                     /locus_tag="VE844_09850"
                     /EC_number="2.3.1.101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012405695.1"
                     /note="catalyzes the transfer of a formyl group from
                     formylmethanofuran to tetrahydromethanopterin
                     tetrahydromethanopterin; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran--tetrahydromethanopterin
                     N-formyltransferase"
                     /protein_id="HZC01644.1"
                     /translation="MRIHSTEVIDTFAEAFEMWAARVIITAYSREWALAAARSMTGFA
                     TSVIGCKCEAGIESEIPEAQTPDRRPGVSVLLFATSSDSVGKRLLERIGQSV"
BASE COUNT          404 a          512 c          475 g          356 t
ORIGIN      
        1 agcccgagga tcaccgcttg gatgtccatc ccggcacgcc attcacccgt tcaggcacag
       61 gcgggatcgt gccttcgacc tttgccaccg gctatcggta tgccacactc ggttacacga
      121 cggcgatgga agccgcggta ccccccattg gggcacgcca tgtcttggaa gagatgcacg
      181 acacgccggt catcgataaa ggtttttacg tgctcctcgg taacaatgtg ttcctttatc
      241 gtttactcaa ggaagggcgc atggatgagt tccgtcaagc cgtagcctgg tgggtgaatt
      301 cgaccaaggc ctatggcgtt aaactggtga ataccggcag cgatgagctc tggaaaggtc
      361 ggcgcaacgc caatatcacc gatctcaatg agaccatcga taattttggc ctcacaccct
      421 tacagatcat caaggcattt attgagacgg tcaatgcgct gggtttgccg catccaccgc
      481 acatccactg caataatctc ggccagagcg gtaactatac cacgaccctc gacaccatgc
      541 gtgccgccga ggaccaacgg gtccatatcg cccatatcca gtttcatagt tacggcggtg
      601 aactgggcaa gaacccgact tccaaggccg cagagatcat cgactacctc aatcgtcatc
      661 ccaagatcac ggcagatgtc ggccaggtca tgttcggcaa ggcaacggcc atgaccgcgg
      721 atgcaccgct cgcctatatg ctgcggcgta tcagcgggaa taaatgggcc aatgctgata
      781 ccgaatgtga aagcggttgc gggatcgtcc ccttcagcta tcaggaacgt gtctatatgc
      841 acgccctgca atgggcgatc gggcttgagc tgttcttgct atccaaagac ccctggcggc
      901 tcgtactctc taccgaccat cccaacggcg gctcgttcat gatgtatccg cgcctgatcc
      961 ggctgctgat ggatcgggag tttcgtaacg aacagatcca ccaggtcaat caaagggcga
     1021 tccgcaagac ggtgttgtcg gacttaagcc gcgagtatac gctgcaagag atcgccatca
     1081 tcacccgcgc gggaccggca cgggcgcttg gcctccagca taagggtcat cttgggatcg
     1141 gggcggatgc agatctcacc ctctacgaag aacacgaaga taaggaaaag atgttcagca
     1201 cgccccgcta tgtcatcaag gatggccagc ttatcattga agactacgag tttcgagccg
     1261 atcatgaagg ccgtatcctc cacgtcgccc cggactacga tccggaaata gagaaagcca
     1321 ttaagccttt tttcgaggag ttctacagca tccgcttcga caactacgcc gtccccgacc
     1381 actatttaca ccatcaacag gtgatcccga ctacgcatca agcagcgagc tagaaaaata
     1441 aggatataag aaagcaagat gcgcatacac tcgaccgagg tcattgatac cttcgccgag
     1501 gcctttgaga tgtgggccgc gcgcgtcatc attaccgcgt acagtcggga gtgggccttg
     1561 gcggccgccc gctctatgac cgggtttgcg acctcggtga tcggctgcaa atgcgaggcc
     1621 ggcatcgaat ccgagatccc ggaggcccag acgcctgatc ggcggcccgg ggtgagcgtt
     1681 ttgctctttg ccaccagcag cgacagtgtc ggcaagcgtc tccttgagcg tatcggccag
     1741 tcggtca
//
LOCUS       DASQSL010000956         1671 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_32389, whole genome shotgun sequence.
ACCESSION   DASQSL010000956 DASQSL010000000
VERSION     DASQSL010000956.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1671
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32389"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            228..701
                     /locus_tag="VE844_09855"
     CDS             228..701
                     /locus_tag="VE844_09855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01645.1"
                     /translation="MRTDPSEGITTPADLPPPEIVPYSRNAIRQPCPRCGHSAYRDKQ
                     SHRTLHDLGNLDLWCPRDLIVTYSQHFCTKCRQYFNADLSDLAPPGSHYTHRVIDLAV
                     RLVVEDGLPYRPASWHLWRDHRVFVPFATIQNWVEAGGKKGAVSHGHGVSGLGPG"
     gene            667..1608
                     /locus_tag="VE844_09860"
     CDS             667..1608
                     /locus_tag="VE844_09860"
                     /inference="COORDINATES: protein motif:HMM:NF013753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01646.1"
                     /translation="MDTAFLDWALAEFSGYVAADELYDGPFCILSAVDNRCYKRILYE
                     VLDHDPDHDDIRAFLRRLKTALDTRDLKLQGITTDGSSLYPEPLAEVFSGVPHQLCQF
                     HVIKEITQGALKAVAKARERLAQFKPKLKRGRPSSKDKEARRRARKSKEIQQKISDLF
                     QDRYLFVRRYLKASERKRLLDISRGLPQLRKLRELMEQVYALFDRRCRTQTALDKLTK
                     LRQRLSRFKHLGETLKKLYSPTLEKALTFLDDKLLPSTSNAVERGNRRYRKMQKSIYR
                     VRTQDQIKARIALDMWREAQGKGREQTLQALHEARAG"
BASE COUNT          379 a          471 c          465 g          356 t
ORIGIN      
        1 tgggttggaa agcacaacgg cgcgactcgt gccttcttgc tcaagcctgg caactgatac
       61 agggtttcta caggattctg tataaacccc tatacgaggt tcacgggtta aaagggctag
      121 agaaatggag actatagcga ggataccggg ttgctccccc caggcgttta tcgtatagtt
      181 cgggtcttac catttgagcc aggagggcca cacgatgttc ggtccaggtg cgtaccgacc
      241 cgagcgaagg gatcaccacg cccgccgact tgccgccgcc cgagatcgtc ccctacagtc
      301 gcaacgccat ccggcaaccg tgtccacgct gtggtcactc ggcctaccgg gacaagcagt
      361 ctcatcggac gctgcacgac ttgggcaacc tcgacttgtg gtgtccacgt gatctgatcg
      421 tcacgtattc gcagcatttc tgtacgaagt gtcgccagta ctttaacgcc gacctctctg
      481 atctggcccc accgggcagt cattataccc accgggtgat cgatctggcg gtgcggctcg
      541 tggttgaaga cggcttgccc tatcgtccag cgagttggca cctgtggcga gaccaccggg
      601 tgttcgttcc ctttgccacg atccaaaact gggtggaggc tgggggaaaa aaaggcgcag
      661 tctcgcatgg acacggcgtt tctggactgg gccctggctg agttttcggg ttatgtggcc
      721 gccgatgaac tctatgacgg tcccttctgt attctctccg ccgtcgataa tcgctgctac
      781 aagcgcatcc tctatgaggt cttggaccac gatcccgacc atgatgacat ccgggctttt
      841 ctgcgtcggt tgaaaacggc attggacaca cgtgacttga agctacaggg catcaccacc
      901 gatggctcgt cgctctatcc cgagcccctc gccgaggtct ttagcggggt gccgcatcaa
      961 ctttgccagt ttcatgtcat caaggagatc acccaagggg cgctcaaagc ggtagccaaa
     1021 gcgcgtgagc gcttagccca attcaagccc aagttgaagc gtggccgacc gtcgtcgaaa
     1081 gataaagaag cgcgccgcag agcccgcaaa agcaaagaga tccaacagaa aatcagtgat
     1141 ttgttccagg accgctactt gtttgtcagg cgttatttga aagcgagcga acgcaagcga
     1201 ctcctggaca tcagccgtgg tttaccccag ctgcgcaagt tacgtgaact catggagcag
     1261 gtctatgcct tgttcgatcg acggtgccgg acgcagacgg cgctcgacaa actcaccaaa
     1321 ctgaggcagc gtctgagccg gttcaagcat ctgggcgaga cgctgaagaa actctattcg
     1381 ccgaccctgg agaaagcctt gacctttctc gatgacaaat tgcttccctc gacctccaat
     1441 gcggtggaac gtggcaatcg gcgttatcgg aagatgcaaa agagtattta cagggtccgc
     1501 acgcaagatc aaatcaaagc ccgaattgcg ctcgacatgt ggcgagaagc ccaaggcaaa
     1561 gggcgtgagc agacccttca ggccttgcat gaggcgcggg caggatgaat ccaacccggt
     1621 atctttagta cagtctcaaa gataaagcat tttaggactt tggccatcgt t
//
LOCUS       DASQSL010000957         1281 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_144731, whole genome shotgun sequence.
ACCESSION   DASQSL010000957 DASQSL010000000
VERSION     DASQSL010000957.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1281
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144731"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..799
                     /locus_tag="VE844_09865"
     CDS             <1..799
                     /locus_tag="VE844_09865"
                     /inference="COORDINATES: protein motif:HMM:NF027593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4921 family protein"
                     /protein_id="HZC01647.1"
                     /translation="YAEIFEPDEVPAGMQPDAWAIRVFHNLIPRIPEECTGGRNESYV
                     LVEDARHYMLNAHSHRDLQWSGALPVKQFVALIKANVRTMRLAYANETVRSVLIRKNQ
                     GAESGGSQPHIHNQVIASNALFPDIETEMHVTDREPHIWVECADFFRQEGWIIREEGS
                     LVTCWSPFGKFPRCFDIIDLAHWGPLTEMADDVIERFARALHQVLVLFGPFALDYEVH
                     QGDGIPLHVHVNSRQFTYSNIGGTLNLPNDLTDKVQAIRRTLQGYAL"
     gene            826..>1281
                     /locus_tag="VE844_09870"
     CDS             826..>1281
                     /locus_tag="VE844_09870"
                     /inference="COORDINATES: protein motif:HMM:NF016196.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 family protein"
                     /protein_id="HZC01648.1"
                     /translation="MNNWVWLTPFVGAFIGWLTNYVAIKMLFRPREPWYILGFPMQGV
                     MPRRQRDLALKIGEVVEEELLKSEDLLSAINTEELRAHLTEVVEVRVDRFLREKLFRG
                     EFLYERVLSREAVQRVKRMLITELVNLFPLEVEAAITQLVEKVNIRKIVA"
BASE COUNT          262 a          383 c          369 g          267 t
ORIGIN      
        1 ctatgccgag atcttcgagc ccgacgaggt ccccgcaggg atgcagcctg atgcctgggc
       61 catccgcgtg ttccataatc tcatcccacg catccccgag gaatgtaccg ggggccgtaa
      121 cgagtcgtac gtactcgtag aagatgcccg ccattacatg ctgaatgccc actcgcaccg
      181 agacctgcag tggtcagggg cgttacccgt gaagcagttc gtcgcgctca taaaggcgaa
      241 cgtacggacc atgcgtctgg cctatgcgaa tgagaccgtg cgttcggtgc tgatccgcaa
      301 gaaccagggc gccgagtcgg gagggtcgca gccccatatt cataaccaag tcatcgcctc
      361 caacgccctg ttccccgaca tcgagaccga aatgcacgtc accgaccgcg agccgcatat
      421 ctgggtggaa tgcgccgatt tctttcgcca ggagggctgg attattcgtg aagagggctc
      481 gctcgtgacc tgttggagtc cgttcggcaa gtttccccgt tgcttcgaca tcatcgacct
      541 cgcccattgg gggccgctca cagagatggc ggacgacgtc atcgagcggt ttgcgcgtgc
      601 gttgcaccag gtcttagtgc tctttggccc gtttgccctg gattatgagg tgcaccaggg
      661 ggatggcatt ccgctccacg tccatgtgaa ctcacgccag tttacctact cgaacatcgg
      721 cggcacgctg aacctcccca acgacctgac ggataaagta caggccatcc gtcggaccct
      781 ccagggctat gcgctgtaag tctcatcccg acaacgagga gcagtatgaa taactgggta
      841 tggctgaccc ctttcgtagg ggcctttatc ggctggttga ccaactacgt cgccatcaag
      901 atgttatttc gaccccgtga accctggtat atcctcggat ttcccatgca aggggtcatg
      961 cccagacggc agcgcgacct ggcccttaaa atcggcgagg tagtcgaaga ggagctgctc
     1021 aaatctgaag acctgctcag cgccatcaac acggaggaat tgcgcgctca cctgaccgag
     1081 gtcgtcgagg tgcgcgtcga tcgctttctg cgtgaaaaac tcttccgcgg cgaattcctc
     1141 tatgaacggg tcttgtcgcg ggaggcggta cagcgggtga agcgcatgct gatcacggag
     1201 ttggtcaacc tcttcccgct tgaggtcgaa gccgccatta cgcagctcgt ggagaaggtg
     1261 aacattcgca agatcgtcgc c
//
LOCUS       DASQSL010000958         3934 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_75938, whole genome shotgun sequence.
ACCESSION   DASQSL010000958 DASQSL010000000
VERSION     DASQSL010000958.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3934
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75938"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            578..1144
                     /locus_tag="VE844_09875"
     CDS             578..1144
                     /locus_tag="VE844_09875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009282067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2382 domain-containing protein"
                     /protein_id="HZC01649.1"
                     /translation="MNQPGRFIVIDKDGVRGTLERLPSPQASAAEAQVTVQLENGQRV
                     IVPARALLERECEDGTFFLSRGFAELGTDASTDVNSEPDSLVVPVMEEEVEVERVAIN
                     RIVDRPLPVRHEGDTIIVPLLEEVLVVEKRLVLKEELRITKRQHKTRKPQRVTLRREE
                     VRVERLDSSEQQRGKDKGGQPTSAASSK"
     gene            1201..1986
                     /locus_tag="VE844_09880"
     CDS             1201..1986
                     /locus_tag="VE844_09880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017732478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YsnF/AvaK domain-containing protein"
                     /protein_id="HZC01650.1"
                     /translation="MTKTVIGLFDNTRAAGRAVLELINSGIPREDIGITSQDYMAGER
                     TGYDSSAETDAGDKYKVIGEKISNFFSSLLGGDNANDVGYYSDAVRRGGAVVTVDAET
                     DDAANRAAALMDQYGATDVDERGAQSQKGGEVAIPVMEEELQVGKRQVERGGVRVRSR
                     IIERPVEEMVRLREERVRVERRPVNRPVTEADLRAFREGTIEVIEQAEELVVSKQARV
                     VEEVAVGKDVAERTETVRDTVRRTEVDVEETGSKKSKDPEDNR"
     gene            2194..2340
                     /locus_tag="VE844_09885"
     CDS             2194..2340
                     /locus_tag="VE844_09885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01651.1"
                     /translation="MSYTVRDIAYDYSVNAKQVNRFLDGKLPADDPVTRQIAVFLKSV
                     ELDL"
     gene            2498..>3934
                     /locus_tag="VE844_09890"
     CDS             2498..>3934
                     /locus_tag="VE844_09890"
                     /inference="COORDINATES: protein motif:HMM:NF017021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HZC01652.1"
                     /translation="MRGILKWTGIAAAILAVAIVVVIAFFDWNSLKGFISDQISEVIG
                     RPFAIQGDLEVDLSLTPRITAHQITLANAPWGSKPEMLDVERLEFSLQLLELLRGRVV
                     LPEIKVSQPRLLLEKNQGGEGNWKLDTQTEAEPAERTEFPKIGLLTIKEGKLTYRDRI
                     AGTDITMDMSTAVGAAKEQAVQLTGQGRFEGEKFMLQARGGSLLTLWDKDKPYPIDFK
                     ASIGNAGATVKGTFAEPLQLQGPDLTLSLQGSDLSKLFPLLGVALPETPPYRLTGHLI
                     RRGETWIFNDFKGTVGDSDLSGDIAFASKGKRKRPYLEGDLVSRKLDFADLAGFIGAK
                     PSADKEEEATSQKQERQAERVAQHTRVFPDEPYDLKALKAGDAKVKFQGLKIITPKVP
                     IDNLTANLQLENGRLTLKPLNFGIGIGKITANIILDAQEQNTLLTTADIQINRVQLKR
                     LLADTRFSKQSAGDFVGSANLSTTGNSLA"
BASE COUNT          983 a          965 c         1161 g          825 t
ORIGIN      
        1 tcaagcccag accggccggt acctctaaat ttgtcaagcc tcagcttatc tacagcttct
       61 gtggataatt gatttcgtaa cgtaatatct tgggtttttg taactcaatc aaactgatta
      121 cgttactaat tcatattgaa tgtgcaacgt attcatcttg aaatcgtaac tgaatcagtt
      181 gaatccgtaa cagaatctaa agcggagcca atcgaggaca tcaggcgcat cgtcgagcga
      241 tggggggagc tgctaaagcc ctatcaggac gctaacggcc aggttaagca gccgcagtgg
      301 tcgaagtgct gggagatgtg gcaggagctc ggacagggat gtacatcaga gccgtcaggg
      361 atagtacatg tcaccataca cctccgatcc gaccttggct tattaatccg agcgttaaat
      421 caacccaaat gaaacacatt tttaagaggg ttttttgacc cagggaggta cggactgagc
      481 tatttacaca ccgattgacg gaacctccag ggattatgac actcatttct ataagggcgt
      541 ttatttttcc tatacttttt caaatgaaga aaacgtgatg aaccaaccag gacgcttcat
      601 tgtgattgac aaggatggcg tacgcggcac cttggagaga ttgccatcac ctcaagcgag
      661 cgccgcagaa gcgcaggtga cagtgcaact tgaaaatggc cagcgagtaa tagttccggc
      721 acgggcacta cttgagcgtg agtgtgaaga cggcaccttt ttcttgtccc gcggctttgc
      781 ggaactggga actgatgcga gcactgacgt taattcagag ccggattctc tggtggtgcc
      841 cgtcatggaa gaagaggttg aggttgagcg ggtagctatc aaccgcatcg tggacagacc
      901 cctaccagtc cgccatgaag gtgacacgat aatcgtcccg ctcttggagg aggtgctggt
      961 cgtggagaag cggctcgtgc tcaaggagga gttgcgcatc accaagcggc agcataagac
     1021 gcgcaagccg cagcgggtga ctcttcgcag ggaggaggtg agggtcgagc gtctcgacag
     1081 ctcggaacaa caacgcggga aggataaagg tgggcagccg acctcggccg cttcgtcaaa
     1141 ataggcgccc ggcataatga accgaatatc aaattatttg gttgaaaagg aggagcaatc
     1201 atgacgaaaa cagtgatagg tttgtttgac aacactaggg cagcagggag ggctgtgctt
     1261 gaactgatca acagtggcat accgcgtgag gacatcggaa ttacctcaca ggactacatg
     1321 gcgggtgagc gtacgggcta cgatagctcg gctgagactg atgctgggga caagtacaag
     1381 gtgatcggcg agaagatcag caacttcttc tcatcgctgc tcggcggaga taatgcgaac
     1441 gatgtcggat actattccga tgcagtgcgc cgcggtggcg cggttgtgac tgtcgatgcc
     1501 gagacggacg acgcggctaa tcgagcagcg gcgctcatgg atcaatacgg cgccaccgat
     1561 gtggatgagc gtggtgctca gtctcaaaaa ggaggcgagg ttgcaattcc tgtgatggaa
     1621 gaagagttgc aggtcggcaa gcgccaggtg gagcgcggcg gagtccgcgt gcgcagccgc
     1681 atcatcgaaa ggcctgtgga ggagatggtg cgactgcgcg aggagcgagt cagagtcgag
     1741 cgccggcccg tcaaccgccc cgtcactgag gctgatctgc gagcattccg ggagggcacc
     1801 atcgaagtca tcgagcaggc cgaggagctg gtcgtcagta aacaggctcg cgtcgtcgaa
     1861 gaggtagccg tcggcaagga tgttgcggag cgcacggaga cggtgcgcga tacggtgcgc
     1921 cgcaccgagg ttgatgtcga ggagacgggg tcaaagaagt cgaaggaccc ggaagataac
     1981 aggtaaggca cgtagtcgac gcccaaaaca aaccggatca caattggggt gcaggttttg
     2041 cgcctcgcga tccgattacc ggagggtgag gtctctcaga aacaggccca ctcttcaacc
     2101 cctttcatcg aaggccaagt ggctcccatc atgtagctca tggcgactac atgaaggtgt
     2161 tgatacgcag acatccgcac ggaactcaag cgcttgagct acaccgtccg cgacatcgcc
     2221 tacgactaca gtgtcaacgc gaaacaggtg aaccggttct tagatggcaa gctgcctgcc
     2281 gacgatccgg tcacacggca gatagccgtg ttcttaaagt ctgtggagtt ggatctctga
     2341 tgcgggtttt tgggcaacag ccccctgttc tcaaaaaggc cagtgagtag ctgaattgag
     2401 agtgaggctg ctgggtgctg agaaagattt ggggtgacaa gggctcgaga gagctagggc
     2461 ggtttttttg atttctactc cataagaggg gctgcacgtg cggggtattt tgaaatggac
     2521 agggatcgcc gctgcgatat tggcggtcgc tattgtcgta gtgatagcct ttttcgactg
     2581 gaatagtctc aagggcttca tatcagatca gatcagtgaa gtcataggac gcccttttgc
     2641 tattcagggt gatctggagg tcgatctatc gttaacacca cggatcacgg cccatcagat
     2701 cacgctggcc aatgcgccct ggggcagcaa gcctgagatg cttgatgtcg agcgcctgga
     2761 gtttagcctc cagctcctgg agcttttgag aggccgggtg gtactgccag aaatcaaggt
     2821 atcacagccc cggctactcc ttgagaagaa tcaagggggc gaaggcaact ggaagctcga
     2881 tacccaaacc gaggctgaac cggcagagcg tactgaattt ccgaagattg gcctccttac
     2941 catcaaggag ggcaagctta cctatcgcga ccggatcgca ggtacggata tcacaatgga
     3001 tatgtctacc gctgtagggg ccgctaaaga gcaggcggtc caattgacag gccagggtcg
     3061 cttcgaaggg gagaagttca tgctacaggc gcggggcgga tcgctattga ccctgtggga
     3121 taaagataag ccctatccga tcgatttcaa ggccagtatc ggcaatgcag gggccacagt
     3181 aaaaggcacg ttcgcagagc cgctgcaatt acagggcccc gatcttaccc tgagtttaca
     3241 aggctccgat ctctccaagc tcttcccgct cctcggtgta gcgctgcccg agaccccgcc
     3301 ctacagactc actgggcatc tgatccggcg aggtgagacc tggatattta acgacttcaa
     3361 aggcactgtt ggcgatagcg atctatcggg tgatattgcg tttgctagca aaggcaaacg
     3421 taaacggccc tacctagagg gcgatctagt ttcccgtaag ctcgatttcg ctgatctagc
     3481 gggtttcatt ggtgcaaagc cttctgccga caaggaggaa gaggcaacct cacaaaagca
     3541 ggaacgacaa gcagagaggg tggcacagca cactcgggtg ttccctgatg aaccttatga
     3601 cctcaaagcc ctgaaggccg gcgatgccaa ggtcaaattc cagggtctaa agatcattac
     3661 ccctaaggtg ccgattgata atttgactgc taatttgcaa ttggagaatg gtagacttac
     3721 cctgaaaccg cttaactttg gcattggcat cggtaagatc acggctaata tcatactcga
     3781 tgcgcaggag cagaataccc tactcacgac agccgatatc cagatcaaca gggtgcagct
     3841 taagaggtta ttggccgata cccgcttctc caagcaaagt gccggcgatt tcgtcggcag
     3901 cgcgaacctt agcaccactg gcaactcgct ggcc
//
LOCUS       DASQSL010000959         3285 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_60284, whole genome shotgun sequence.
ACCESSION   DASQSL010000959 DASQSL010000000
VERSION     DASQSL010000959.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3285
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60284"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2135)
                     /locus_tag="VE844_09895"
     rRNA            complement(<1..2135)
                     /locus_tag="VE844_09895"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            2759..2908
                     /locus_tag="VE844_09900"
     CDS             2759..2908
                     /locus_tag="VE844_09900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01653.1"
                     /translation="MTRRTLGLLVTFALALQVMPLRTDAQQPTKVYRIDRLNAGSSPE
                     VSPFI"
     gene            3052..3276
                     /locus_tag="VE844_09905"
     CDS             3052..3276
                     /locus_tag="VE844_09905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01654.1"
                     /translation="MATHDERNATHILTLLEQAPGRQLSSEQLAEQTGWSPEELSAAV
                     GLLRSRQQVVLDDASLGSGNYGFTSIMLPS"
BASE COUNT          609 a         1055 c          827 g          794 t
ORIGIN      
        1 tcactgagtc cgtcgttgag agagcgctca agtcgttacg ccattcatgc aggtcggaac
       61 ttacccgaca aggaatttcg ctaccttagg accgttatag ttacggccgc cgtttactgg
      121 ggcttcagtt cagagcgtcg cggtgttacc accgctaacc cctcccctta accttccagc
      181 accgggcagg cgtcagaccc tatacatccg cttgcgcgtt agcagagtcc tgtgttttaa
      241 gtaaacagtc gcctgagcca tttctctgcg gcctcttcag cctccggggg cgaacccctt
      301 tagcctactg aggcacccct tctcccgaag ttacggggtc attttgccga gttccttaac
      361 gacggttctc tcaagcgcct tgggttgctc accccaccca cctgcgtcgg tttccggtac
      421 ggtcacctac aggactcact agaggttttt ctcgggagca tgggctcaac cactttatga
      481 ggctaggcct ctcgtactcg cttctcggag ttagcgacag cccggatttg cctgagctgt
      541 cctcctacca gcttcaaccg acacgaccat tcgtcggctg gtttaccctt ctccgtcacc
      601 ccattgctgg ataacgccct acaggtggta cgggaatatt aacccgtttc ccatcaccta
      661 cgcctgacgg cctcggctta gggaccgact aaccctgggc ggattaccct tccccaggaa
      721 accttgggtt ttcggcgaac gggtttttca cccgttttat cgttacttat gccgacatag
      781 tcacttccct acactccagc ggtccttacg atccgccttc cacgcgtagg gaacgctccc
      841 ctacccccta tcctgctgga tagagccgca gcttcggtac ccggcttgag ccccgttgga
      901 ttttcggcgc cgagccactt gaccagtgag ctgttacgct ttctttaaag gatggctgct
      961 tctaagccaa cctcctggct gtctaggcgt ctcgacaacc tttcccactt agccgggatt
     1021 ttgggacctt agctggcggt ctgggctgtt tccctctcga ccatggagct tagcccccac
     1081 agtctgtctc ccccgatcgg tcttgatggc attcggagtt tggttggagt tggtagcctg
     1141 gtagggcccc ttgtccatcc agtgctctac cgccatcagc cagctcggga ggcgatacct
     1201 aaatatcttt cggggagaac cagctatcac cgaattcgct tagcttttca ctcctaccca
     1261 cagctcatcc cacaagtttt caaccttgaa gggttcgggc ctccaccggc tggtaaaccg
     1321 gtttcaccct ggccatgggt agctcatccg gcttcgggtc tactccacgt aactcatcgc
     1381 cctgttcaga ctcgctttcg ctacggcttc acctcacggc ttaaccttgc tacgtagagt
     1441 aactcgtcgg cccattatgc aaaaggtacg cagtcgcaca ggtcactgag ttccctcagc
     1501 gaccaccgtg cttccaccgc ttgtagacac acggtttcag gttctctttc actcccctca
     1561 ccggggtgct tttcaccttt ccctcacggt acttgtgcac tatcggtcgc tcgcgagtat
     1621 ttagccttgg aaggtggtcc tcccagcttc ccacaaggtt tcacgggccc cgtggtactc
     1681 gggaaacgaa cggagggagg agacgccatt ttggctaccg ggctatcacc gtctatggcc
     1741 gaccgttcca ggtccttcgc ctatgccgtc tcttggtaac tccccgaccg aggtgtatct
     1801 cggtcaagtt cgcccccaca accccagctg tccaacgcat acacgctatc acggacagtt
     1861 ggtttgggct catcccgttt cgctcgtcgc tactcaggga atcgcaattg ctttctcttc
     1921 ctccgggtac tgagatattt cacttccccg ggttggcttc tacaccctat ggattgaggt
     1981 gtagatgcga cggcattacc cgccgcgggt tgccccattc gggtaccccc ggatcaacgc
     2041 ctgtaagcgg cttcccgggg cttatcgcag cttactacgc ccttcctcgc ctgcgagcgc
     2101 caaggcatcc accgtgtgcc cttcgatgct tgaccattgt tgccagcaca gatgctgtac
     2161 tcgtctacag ttgtcaaaga gccctgcgtg cgccacctta cgcgcgcaca gttttcgctc
     2221 cgtccatcac ctgctgttca gcgcccggcc tcgcgcgtcg cggggagacc ggcgtgaggg
     2281 ttcctcgcgg cttgagcgct aaaccagtct atcaggatgt tctctaggat aagcaggaga
     2341 gcgggtattg ccgaagagcc gaccaacttc agagcagcct tacatagtgg cagatctaga
     2401 agtgcgttag acttaatata taccatttcc gctctgtgtc aagcccttct ctctggctcg
     2461 cggagtgaac cccacagagg tactacaccg gctttcagcc agccttccat ggctgcagcc
     2521 cggtcaatgt agccggctta atataggcca cattgatcgt ttgtcaagcc cccctgaccc
     2581 catacaccac tcgaggagct ccggcttccg cagcgtcgcc ttccgcccaa atttacgact
     2641 ggtgtgtccg cgaatcgtcc ccatggatgt gaacgggttc atctgcaaaa ttgatgtcct
     2701 tctctgaccc ataacgcgta gaatgccccc gatccgtccg tgcctggagg aggtaattat
     2761 gacgcgccgc accctcggac tcctcgtcac ctttgcgctc gccctccagg tgatgccgct
     2821 caggactgac gcacaacagc caacgaaggt gtaccgcatt gatcggctga acgcgggcag
     2881 ctcgcccgag gtttcaccgt tcatataatg aacggttgag gccttccggc aaggcctgcg
     2941 tgagctcggc tatgtggaag gccataactt cgtcatttcg ccgcatggcc agcgcacgac
     3001 atggccatcg ttcccggacg cgggtgtctc tgaacgcatc aggaggagat catggcgact
     3061 cacgacgaac gcaacgccac ccatattctg accctgttgg agcaggctcc cggtcgacag
     3121 ctgtcatccg agcaactggc agaacagacg ggctggagtc ctgaggaact cagtgcggct
     3181 gtcggcttac tcaggagtcg gcagcaagtc gtccttgatg atgcctccct cggaagtggc
     3241 aattatggat tcacttcgat catgctgccg tcgtagacag acacg
//
LOCUS       DASQSL010000960         2797 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_184990, whole genome shotgun sequence.
ACCESSION   DASQSL010000960 DASQSL010000000
VERSION     DASQSL010000960.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2797
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184990"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(107..484)
                     /gene="queD"
                     /locus_tag="VE844_09910"
     CDS             complement(107..484)
                     /gene="queD"
                     /locus_tag="VE844_09910"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013374437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HZC01655.1"
                     /translation="MKMEIFKEFTLEAAHFLPHLPEGHKCRRLHGHSFRIEVYVCGEV
                     QRPVGWVMDFAEIGARFQPLFEQLDHYCLNQVPGLENPTSENLARWIWQRLKPELPGL
                     SKIIVRETCSAGCIYEGEDKSTD"
     gene            complement(510..1370)
                     /locus_tag="VE844_09915"
     CDS             complement(510..1370)
                     /locus_tag="VE844_09915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013031655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid aminotransferase"
                     /protein_id="HZC01656.1"
                     /translation="MSICYLNGEFLPLEEAKISVLDRGFIFGDGVYEVMPVFNGRPFR
                     LGGHLQRLANSLEAIGIADPFTEAEWTALLTILIARNGAGDQSLYLQITRGVAKRDHV
                     LSTPVAPTVFAMTTRLETPRVPAPVSAISCEDIRWKLCHIKAIALLPNVLLRQQAAVA
                     GAYEAILIRQGQLTEGSASNVFIVSAGVVKTPPKSSAILSGITRDLVLELLAQSDVPW
                     CETPITESELKQAEEIWLTSSSREILPVIELDHAPVGLGKPGPIWQRIFALYQEYKAA
                     GFDTLKKVAS"
     gene            complement(1385..2527)
                     /locus_tag="VE844_09920"
     CDS             complement(1385..2527)
                     /locus_tag="VE844_09920"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005222261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HZC01657.1"
                     /translation="MIKRLVMWALCLFGLIVPALAQTVSPVPAPPKVGARAYLLIDHN
                     SSQILAESHIDVAMEPASLTKIMTAYVVAKELQQGHIKLDDQIVVSENAWRASGSRMF
                     IQVGTQVSVKDLLMGIIVQSGNDASVAIAEHVSGSEQVFAELMNQHAAKMGLNGTHFM
                     NSTGLPDPDHYTTARDLATLAMALIRDMPEIYEWFKIPEFKYNNIIQPNRNLLLRRDP
                     SVDGIKTGHTETAGYCLVAAAKRENMRLIAVVLGTAGENARVTAAQALLNYGFRFYET
                     HRLYAANQPITKARLWKGKQDTVDLGLMEDLYVTVPRNQYQAIHTTMELGPKLIAPVT
                     KGKPGGTLKVALGDKPLAQRPLVLLQSAEQGGIIGRLTDHIRLYFE"
     gene            complement(2603..>2797)
                     /locus_tag="VE844_09925"
     CDS             complement(2603..>2797)
                     /locus_tag="VE844_09925"
                     /inference="COORDINATES: protein motif:HMM:NF016895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HZC01658.1"
                     /translation="RAEGFRHRIYGMVQHSVRIQPVLIAGKPVYKVQVGPLANVEAAD
                     QIIQTIERYGLRDHRLVVNR"
BASE COUNT          611 a          787 c          781 g          618 t
ORIGIN      
        1 gatgggctgg agggtaatgg ggtcgttcgt catgatctca ttcccaatat atccatacag
       61 cttggcatcg aggatgacct tacccactta tcatactcca ccgggatcaa tccgtcgatt
      121 tatcctcacc ttcatagata caccccgcgc tgcaggtctc gcgcactatg atcttcgata
      181 agccggggag ctcgggcttg agtcgctgcc agatccagcg cgccagattt tcactcgtgg
      241 ggttttccaa accggggacc tggtttaggc agtaatgatc caactgctcg aagagcggct
      301 gaaatcgagc accgatctcg gcgaaatcca tgacccaccc gacaggtctt tgcacctccc
      361 cgcagacata gacctcgatg cggaaggaat ggccatgcaa tctgcggcat ttatggcctt
      421 ccggcagatg gggtagaaag tgcgccgcct cgagtgtaaa ctccttgaag atctccatct
      481 tcatcagcac ttggaccggc cggtgtcagc taagaggcga ccttctttaa ggtgtcaaag
      541 cccgccgcct tatattcctg atataaagcg aagatccgct gccagatcgg gccgggtttg
      601 cccagaccca ccggggcatg gtcgagctcg atgaccggta ggatctcacg gctagaactg
      661 gtcaaccaga tctcttcggc ttgcttaagc tctgattcgg tgatcggcgt ttcacaccaa
      721 ggaacatcgc tttgggcgag caactccaaa accagatcgc gggtgatccc ggacaggatg
      781 gcagagcttt ttggcggggt cttgaccacg cctgcggaga cgatgaacac attactcgcc
      841 gatccctcgg tgagctgtcc ctgccggatc aggatcgcct cataggcgcc tgccaccgct
      901 gcctgctgac gcaggagcac attgggcaag agggcaatgg ccttgatgtg gcaaagtttc
      961 cagcggatat cttcacagct gatcgccgag acgggcgcag gcacacgcgg tgtctccaag
     1021 cgcgtggtca tggcaaacac ggtaggggcc acgggtgtag aaagtacatg gtcgcgtttg
     1081 gcgacacccc gggtgatctg caggtatagg gactgatcac cggcaccgtt gcgggcgatc
     1141 aggatggtca acagcgccgt ccactccgcc tcggtgaacg gatcggcgat ccctatcgcc
     1201 tcaaggctat tcgccaagcg ttgcaaatgc ccgccgagcc taaacggccg gccattaaaa
     1261 accggcatca cttcatagac accgtcaccg aagataaacc cacggtccag caccgagatc
     1321 ttcgcctctt ccaagggcaa aaactcacca tttaagtagc aaatcgacat gatggagacc
     1381 ccccttattc gaaatacaat cggatatggt cagtgagacg gcctattatt ccgccctgct
     1441 cggcggattg gagcaagacc agtgggcgct gcgcaagtgg cttgtccccg agcgccacct
     1501 tgagtgtgcc gcccggtttg cctttggtca ccggtgcgat cagtttaggt ccaagctcca
     1561 tggtcgtatg gatagcttgg tactggtttc gcggcacggt cacgtacaga tcctccataa
     1621 gcccaagatc aaccgtatct tgctttcctt tccaaaggcg cgccttagtt atgggttggt
     1681 tggcggcata taggcgatgg gtctcataga aacgaaaacc gtagttgagc agcgcttgag
     1741 cggctgtgac tcgcgcattt tcgccggcag ttccgaggac cacagcgatc agacgcatat
     1801 tctcgcgctt ggctgcggcg accaggcaat aaccggcggt ctcggtatgg ccggtcttga
     1861 tgccatcgac cgagggatcg cgccttaaga gcaggttgcg gttgggttga atgatattgt
     1921 tatatttgaa ttcagggatc ttaaaccatt catagatctc gggcatatcc cggatgagtg
     1981 ccatcgcgag cgtggcgaga tcacgcgcgg tcgtataatg atcgggatcg ggcagaccgg
     2041 tgctgttcat aaaatgggtt ccattgagac ccattttggc tgcatgctgg ttcatgagct
     2101 cggcaaacac ctgctcactg cccgagacat gctccgcgat cgccacactt gcgtcattcc
     2161 ccgattggac gatgatgccc ataagcagat ctttgaccga gacctgcgtg ccaacctgga
     2221 tgaacatgcg cgatccggag gcgcgccagg cgttttcact gacaacgatc tgatcgtcaa
     2281 gcttgatatg gccttgctgc aattccttcg caaccacata ggcggtcatg atcttggtca
     2341 ggctggcagg ctccatggcc acatcgatat ggctctcggc caagatctgg ctgctgttat
     2401 ggtcgatcag caggtaggcg cgcgccccga ctttaggggg cgcaggtaca ggagaaacgg
     2461 tttgcgcgag cgcgggcaca atcaacccga acaggcacaa cgcccacata acgagtcgct
     2521 ttatcatggt cctatactga cggctaattc cgggatctcg ggatctatag attatcaggg
     2581 cgtgagaaga ttgcggcctt atctatctgt tgacgactaa gcgatgatcg cgcaatccat
     2641 aacgctcgat ggtctggatg atctgatcag cggcttcaac attggccagc ggacctacct
     2701 gcactttgta aaccggcttg cctgcgatca acactggctg gatcctgacc gagtgctgga
     2761 ccatgccata gatccggtgc cggaaccctt cggctct
//
LOCUS       DASQSL010000961         1056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_7814, whole genome shotgun sequence.
ACCESSION   DASQSL010000961 DASQSL010000000
VERSION     DASQSL010000961.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7814"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..869)
                     /locus_tag="VE844_09930"
     CDS             complement(<1..869)
                     /locus_tag="VE844_09930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018955912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HZC01659.1"
                     /translation="MAQYFLEGDGEMSTRDTGPTNDLLGYPADARLLFVNADDFGMCH
                     AINEAIIRALEEGIVGSCSVMVPCPWALHALAWLQETPDAPFGVHLTSVSEQPTYRWG
                     PITCRTEVSSLVDEAGYFYSGSRIEEFLDQVDVGELEREYRAQIEHVLEVGLRPTHLD
                     SHLGIHTRREEIFEMTLGLAREYGVPLRAYYQRFIERMRRWGYPANDHDLVDSYDLDT
                     EGKAARYAQMLRGLPVGLSEWAVHPGLGNAELRAVEPTSWQVRQSDFDFVISQEARAI
                     LEEEGITLLDYGAL"
BASE COUNT          228 a          334 c          298 g          196 t
ORIGIN      
        1 agcgccccat agtcgaggag agtgatgcct tcctcttcca agatggcgcg cgcctcttgc
       61 gatatgacga aatcgaaatc actctggcgc acctgccaac tagtaggctc cacggctcgc
      121 agttcagcgt tacccagacc gggatggacc gcccactcgc tgagcccgac cggcaacccg
      181 cgcaacatct gcgcgtagcg cgccgctttg ccctccgtgt cgaggtcgta gctgtccact
      241 aggtcgtgat cgttggccgg gtagccccat cgccgcatcc tttcgataaa gcgttggtaa
      301 tacgcccgaa gcggcacgcc atactcgcga gccaagccga gcgtcatctc gaagatctct
      361 tcgcgacggg tgtggatgcc gagatgactg tcgaggtggg tcggccgcaa gccgacctcc
      421 aacacgtgtt cgatctgggc gcgatactcc cgctccaact ctcccacatc gacctggtcc
      481 aggaactcct cgatgcgcga cccggaatag aaataccccg cctcgtcgac cagcgacgac
      541 acctccgtac gacaggttat cggtccccac cggtaggtgg gttgttcgct gacggatgtc
      601 aagtgaacgc caaagggagc atcgggcgtt tcttgcagcc acgcgagggc atggagtgcc
      661 caggggcaag ggaccatcac gctgcaagag ccgacgatgc cttcctcgag agcgcggatg
      721 atggcctcgt tgatggcatg gcacatcccg aaatcgtcgg cgttgacgaa caacaagcgg
      781 gcatcggcgg ggtatcccaa aaggtcgttc gttgggccgg tatcccgtgt gctcatctcg
      841 ccatcccctt ccagaaagta ctgagccatg atagctggta tacggtttct ggagaaacgc
      901 cgagagtgcc tgacacgcga acttctgaga acaccccttc cacgcactca gctgaatgga
      961 agcggtgccc gtctctcggt cgccatgcgt gtacgtcccc ccgagggtcc aacagaacca
     1021 agaataatcc agataatccc agaaaaatat caaaag
//
LOCUS       DASQSL010000962         1655 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_158237, whole genome shotgun sequence.
ACCESSION   DASQSL010000962 DASQSL010000000
VERSION     DASQSL010000962.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1655
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158237"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1157
                     /gene="pabB"
                     /locus_tag="VE844_09935"
     CDS             <1..1157
                     /gene="pabB"
                     /locus_tag="VE844_09935"
                     /EC_number="2.6.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020482203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008153 - para-aminobenzoic acid
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component I"
                     /protein_id="HZC01660.1"
                     /translation="VKRYLGAPVPSNTDLPFSSGAMGYFAYDLGRSLEQLPVVAENDI
                     GLPEMAVGLYDWVVVVDHSERCAWLVGRGRDEQSFDEWDRILEMVQKPSGLSPYLPFR
                     VLTPVISNLDRSSYAQAFRRIKHYIREGDCYQVNLAQRFSARVSGDPWEAYQHLRRLN
                     PAPYSAYFNIPEGVVLSSSPERFLKVQAGQVETKPIKGTRPRSPYKARDHALADELRK
                     SPKDRAENLMIVDLLRNDLGKTCAIGSIRVPKLFEIESFATVHHLVSTVTGRLAPGKH
                     ALDLLAGCFPGGSITGAPKLRAMEIIEELEPHRRSVYCGAIGYIGYDGSMDTNIAIRT
                     LVLDKWCMHGWAGGGIVMDSVLEEEYQETLDKAAAMLRLLAGAAASHVGA"
     gene            1144..>1655
                     /locus_tag="VE844_09940"
     CDS             1144..>1655
                     /locus_tag="VE844_09940"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01661.1"
                     /translation="MWVLKLGGSLARSPALPHWLEVLSEHGGGRVILVPGGGPFADGV
                     RRLQQQWGFEDSVAHHMALLAMEQYGLMLAGIEPRLIPARNKDRLLTVLHAGHVPVWL
                     PAGMAGTREDIPATWETSSDSLAAWLTLELQADCLILVKAVAPKPAKVWVDELCARGI
                     VDAGFSNYLVR"
BASE COUNT          329 a          437 c          508 g          381 t
ORIGIN      
        1 tcgtgaaacg gtatttagga gcgccggtcc cttcaaacac tgacttacct tttagtagcg
       61 gcgcaatggg ttattttgcc tatgatctcg gccgctctct cgagcaactg ccggtggtcg
      121 cggaaaacga catcggcctg ccggagatgg ccgtcggtct ttatgattgg gtggtagtgg
      181 tcgatcatag cgagagatgc gcctggcttg tgggcagagg gcgggatgag caaagtttcg
      241 atgagtggga ccggatcctc gagatggttc agaagccttc tggcctgagt ccttatttgc
      301 ctttcagggt gttgacaccg gtgatctcta atcttgatcg ctcctcttat gctcaggcct
      361 tccgtagaat aaaacactat atccgtgaag gggattgtta tcaggtcaat ctggcccagc
      421 gtttctcggc gcgggtgagc ggggatccgt gggaagccta tcagcatttg aggagattaa
      481 atccggcccc ttactccgcc tacttcaata tcccggaggg ggtggtttta agctcctccc
      541 cagaacggtt tctcaaggtc caagcaggac aggtcgagac taaacccatc aaaggcaccc
      601 gtcctcgttc tccctataag gcacgggatc acgcgctggc cgacgagcta cgcaagagcc
      661 ccaaggatcg ggcggaaaac ctcatgatcg tagatctgct acggaacgat ctcggaaaga
      721 cctgcgccat cggttcgata cgggtgccga aactctttga gatcgagagc tttgccacgg
      781 ttcaccacct ggtaagtacc gtcaccggcc gattggcgcc aggaaaacat gccctggatc
      841 tcctggccgg ctgttttccg ggaggctcca tcaccggtgc gcccaaactg cgcgccatgg
      901 agatcatcga ggaattggag ccccatcgac gcagtgtcta ttgcggtgcc atcggttaca
      961 tcggttatga tggttccatg gataccaaca tcgccatccg caccctggtg ctcgataagt
     1021 ggtgtatgca tggttgggcc gggggtggga tcgttatgga ttctgtgctc gaagaagagt
     1081 accaggagac cctcgataag gcagccgcca tgctgagatt gcttgcgggg gctgcagcct
     1141 cgcatgtggg tgcttaagct aggcggtagc ctcgcccgtt cgcccgcact gccgcactgg
     1201 ctggaggtgc tttccgaaca tgggggaggg cgggttatct tggtcccagg cggtggacct
     1261 tttgccgatg gagtgagacg gctccagcaa cagtggggat ttgaggatag tgttgcgcat
     1321 cacatggctt tattggccat ggaacaatac gggttgatgt tggcaggcat agaacctcgg
     1381 ttaatacctg ctcgcaataa agaccggctg ttgaccgtgc tccatgccgg ccatgtcccg
     1441 gtatggttac ctgccgggat ggccggcaca cgagaggata tccccgccac ctgggagacc
     1501 agctcagaca gtctagccgc ttggctcacg ctggagcttc aggccgactg tctgatcctg
     1561 gtcaaggcgg ttgccccaaa gccggctaag gtgtgggtgg atgagctctg cgcgcgcggg
     1621 atcgtggatg ccgggttttc aaattatctt gtccg
//
LOCUS       DASQSL010000963         1006 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_32433, whole genome shotgun sequence.
ACCESSION   DASQSL010000963 DASQSL010000000
VERSION     DASQSL010000963.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32433"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1006)
                     /locus_tag="VE844_09945"
     CDS             complement(<1..>1006)
                     /locus_tag="VE844_09945"
                     /inference="COORDINATES: protein motif:HMM:NF012593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HZC01662.1"
                     /translation="RVTQFVARLTPFGVFAVAASAAGTMSIEEFERLQLYLLIYAALA
                     LLLTFWVLPALITSLLPLTYREVVGQTKDILVTAFATGSALIVLPLLVERSKELLWQR
                     NLRTDDTEAMAEVIIPASTSFPKIGTLLPMSFVLFAGWFAGAPVSPAQYPTFAGAGLV
                     SFFGSVHVAIPMLLDLLHIPIDLYQLYLALAVVTDRFSALLTTMNNLMLTLLGACAVG
                     GLLSVSWRKILRHVLLTAVLIVAIVGGARVFFNAALRGVYHQDELIARMQPLRSTNHT
                     MVHLSPPSRRALRHPQQSRLQLMRTQGILRVGYSPDSLPFTYFNAEDQLVGFNVEMAH
                     A"
BASE COUNT          250 a          274 c          307 g          175 t
ORIGIN      
        1 gtgcatgcgc catctcaacg ttaaagccca cgagctggtc ttcggcgttg aagtaggtga
       61 acggcagact atctggcgaa taacccaccc tgaggattcc ctgggtacgc atcaactgca
      121 aacgggattg ttgcggatgc ctcagggccc tgcgtgaggg cggagacaga tgcaccattg
      181 tgtggttcgt actgcgtaac ggttgcatac gggcaatcag ctcatcctgg tgatagacac
      241 ccctgagggc ggcgttaaag aagacccgag cgcccccaac gatggcgact atgaggacag
      301 ctgtcaacag tacatggcgc aggattttac gccaggacac gctgagcaag ccgcccacgg
      361 cacaggctcc aagcagggtt aacatcaggt tattcatggt ggtgagcagc gcactgaagc
      421 ggtccgtaac cacggcgagg gcgagataga gttggtacag gtcaatggga atgtgcagca
      481 agtccaacag catgggaatc gccacatgaa cactgccaaa aaagctcacc aggcccgcac
      541 ctgcaaaggt cgggtactgg gcgggcgata ccggcgcgcc agcaaaccaa ccggcaaaaa
      601 gcacgaaact catgggcaac aatgtgccga ttttcgggaa gctagtcgat gcgggaatga
      661 tcacttctgc catggcttct gtgtcgtccg tacgcagatt ccgctgccac agcagctctt
      721 tactgcgctc gaccagcagc gggagaacga tgagggcact gcctgtggca aaagccgtca
      781 ccaggatgtc tttcgtctgt cccacgacct cccggtaggt gagcggcagc aggctagtga
      841 ttagggcggg caggacccaa aaggtcaaca acagagccag ggctgcatag atcagcaggt
      901 agagctgtaa gcgctcgaat tcttcgatgc tcatcgtgcc agcagcactg gccgccacag
      961 caaagacgcc gaaaggggta aggcgggcta cgaattgggt gacccg
//
LOCUS       DASQSL010000964         1356 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_7836, whole genome shotgun sequence.
ACCESSION   DASQSL010000964 DASQSL010000000
VERSION     DASQSL010000964.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7836"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..309
                     /locus_tag="VE844_09950"
     CDS             <1..309
                     /locus_tag="VE844_09950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011217432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01663.1"
                     /translation="RKFLGTNQAAREQHDRNAIALHFEPVQPGPVIWPQIAGCVLQAL
                     VPDYSLWLTNGSDRIQASLLVCVGLPPVERFSALLDGRWAQWGWQDHQVAATGPAPSH
                     "
     gene            complement(380..>1356)
                     /locus_tag="VE844_09955"
     CDS             complement(380..>1356)
                     /locus_tag="VE844_09955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01664.1"
                     /translation="DVSPPQNNQEEISKGEQINDLLAAASRDIKAGHLTKPKGNSAIE
                     KYRAVLALQPGQLEATQGIREIVDRLLRLANKAIERKDWAKALVHIDQAATIEPEARG
                     VAMAREALNIRKAEYEKQSADAQKEAQSQDPKQNVKTLIDLAMQAMGRTEWDKAQVYL
                     DQAAAIEPEDNDIVLLRDELVSRRTKAAAPPLAPQKGPTSEEAGPEEPRSVPEASALV
                     KIQKATPSLPTARPGETISFYTEYALTLPAGTKYTFLEATWVLKRNGKKIGKEGIFSR
                     MVKPGVNTVSTELTLPQYTKPGRFIVEHRVQAGDSADVAKSYFSVVLK"
BASE COUNT          246 a          373 c          372 g          365 t
ORIGIN      
        1 agaaaatttc tgggtacgaa ccaggccgct cgtgaacagc acgatcgcaa cgccatagcc
       61 ttgcattttg aacctgtaca gcccgggcca gtgatctggc ctcaaatagc aggttgtgtg
      121 ctacaagccc tggttccaga ctatagcctc tggctaacta acggttctga tcggatccag
      181 gcctccttgc tcgtctgtgt gggattacca cccgtagaga ggttttctgc cctgcttgat
      241 gggcgatggg cgcaatgggg ttggcaggat caccaagttg ccgccacggg gcctgcacca
      301 agccattgag caagcctgga ttaaggtggc ctacaagatt ctgagcgcgc acctcaaggg
      361 tagcctcggc aacgaccgtt tatttcaata cgacggaaaa gtaggatttc gcaacatcgg
      421 cgctgtcacc tgcctgcacc ctgtgttcaa ctatgaatct acccggtttt gtatactggg
      481 gaagggttag ctcagtagag acagtattga ctccaggctt taccattctg gaaaagatgc
      541 cctccttacc tatcttcttg ccgtttcgct tcagtaccca cgtcgcctca aggaaggtat
      601 attttgtgcc ggccggtagc gttagcgcgt actccgtata gaaacttatc gtctcacccg
      661 gccttgctgt tggtagagaa ggcgttgcct tttggatctt cactagagcg ctagcctctg
      721 gtaccgatcg cggctcctca gggccggctt cctcactagt gggccctttc tggggggcta
      781 aaggtggtgc cgccgccttg gtcctacggg agactagctc atcacggagc aggactatat
      841 cattgtcttc gggttcgatc gcggctgcct ggtcaagata gacctgggcc ttatcccatt
      901 cggtccgacc catggcctgc atcgcgagat cgatgagtgt tttcacgttt tgttttggat
      961 cctgagattg cgcttccttt tgtgcatcgg cagactgttt ttcatactct gctttgcgga
     1021 tgttcagtgc ctcccgcgcc atagcgacgc ctcgagcctc aggttctatt gtcgctgcct
     1081 gatcaatatg gaccagcgcc ttggcccagt ccttacgctc tatggccttg ttggcgaggc
     1141 ggagcagtcg gtccacaatc tcgcggatgc cctgcgtcgc ttctagttga cctggctgaa
     1201 gcgcgagtac cgcccggtat ttctcgatcg cgctattgcc cttcggctta gtcaggtggc
     1261 cggctttgat gtctctgctt gcggcggcaa gaagatcgtt gatctgttcg cctttgctga
     1321 tctcttcttg gttgttttga gggggactaa cgtcga
//
LOCUS       DASQSL010000965         1815 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_88072, whole genome shotgun sequence.
ACCESSION   DASQSL010000965 DASQSL010000000
VERSION     DASQSL010000965.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88072"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..219)
                     /locus_tag="VE844_09960"
     CDS             complement(<1..219)
                     /locus_tag="VE844_09960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002811248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HZC01665.1"
                     /translation="MKKNNSGGYDDPKPAKSRLDIDTVQRVYRRYARLYDLYFGVIFQ
                     RGRKQAIERMRCRPEDHILEVGIGTGLSL"
     gene            346..>1815
                     /locus_tag="VE844_09965"
     CDS             346..>1815
                     /locus_tag="VE844_09965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020485615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HZC01666.1"
                     /translation="MVGYAFKCNTCFHNNKYKSHRVGDILLTDTLSNKPLQSLARKPL
                     PPFPGWWAALGPGVVWMALAQGSGELIWWPYMMAKYGLSFLFLLIPACLLQYPLNIEI
                     GRYTLLTGESIFHGFIRLHRGFGLFLWVLMTLSFLWFGAFASAGGTAMAALTRFPSAW
                     SQSAQSLFWGYASMAVFVVAILLSGVVYTLIERCMKAVAVITVAGLLWACLQSEVMQV
                     TPSFLKGLMGPTGPLPRPWDPEDATKLLTAITFAGLGGFWILFYSYWLRDKGAGMAAH
                     IGRITGPLTGKPETVTSEGNLPQDSAEDARQWRRWRRYLITDALIGIGGNLLTTLMTC
                     LLAYALLFPKGLLPHDYELAVVQSRFFEVSWGELGRLLFLLVAAAFLTDTWLATVDAV
                     SRMQADIVHILFPQSRRLEERHWYYLFLGLLTAITALTMRLDAPGPLILMSAVIGFVG
                     TVIFPVALYLLNYRRLSPHLPPWARPSPQAAWLLAVSFVA"
BASE COUNT          313 a          532 c          502 g          468 t
ORIGIN      
        1 cagagacagc ccggtgccga tgccgacctc gaggatatga tcctccggcc ggcagcgcat
       61 ccgctcgatc gcttgtttac gtccgcgctg gaatataacg ccgaaataca gatcgtagag
      121 tctcgcataa cgccggtaga cccgttgaac tgtatcgata tccaagcgtg atttagctgg
      181 tttggggtcg tcgtatcccc cagaattgtt tttcttcata ggatacccag tgttattgtg
      241 ttactttggg gcgtattctt aaaataggac ggctttggaa ctcgtaggcc cgcgacccct
      301 tcttatctcc cgtgcttgct gcgaaattta tcgactcatg tgataatggt gggatacgcg
      361 ttcaaatgca atacctgttt tcataataat aaatataagt cccacagagt aggcgatata
      421 ctccttaccg atacgctctc gaataaaccc ttacaatcac tggcccgtaa accgctgccc
      481 ccctttccag gctggtgggc tgcgcttgga ccgggtgtgg tttggatggc gctggcccag
      541 ggcagtgggg agctcatctg gtggccgtac atgatggcta aatatgggct cagctttctt
      601 ttcctgctga tcccagcgtg cctcctgcag taccccttaa atatcgagat tggacgttat
      661 accctgctga ccggcgagag catctttcac ggtttcatcc ggcttcaccg tggctttggc
      721 ctatttcttt gggtcttgat gacgctttct tttctctggt ttggggcctt cgcctcggcc
      781 ggaggcaccg ccatggcggc actgacgcga tttccctcgg cttggagcca gagcgcacaa
      841 agcctgtttt gggggtatgc ctccatggcc gtgtttgtcg tcgcgatttt gctcagtggc
      901 gtggtttata ccctgatcga gcgctgcatg aaggcggtcg ccgtcatcac cgtcgccgga
      961 ctgctctggg cctgtctcca atccgaagta atgcaggtca cgccgagctt tctcaagggg
     1021 ctgatgggac ccaccgggcc cctgccgcgc ccttgggatc ctgaagatgc aaccaagctg
     1081 ctcacggcta tcacgtttgc cggccttggg ggattctgga tcctgttcta ttcctattgg
     1141 ctgcgtgaca aaggcgccgg gatggccgct cacatcgggc gtatcaccgg ccccttgacc
     1201 ggcaaacccg agacggttac cagtgaagga aacctgcccc aagactcggc cgaggatgcc
     1261 cgacagtggc gacgctggcg gcgttacctc atcaccgatg ccctgatcgg cattggcggc
     1321 aatctgctga ctacgctcat gacctgcctt ttggcctatg ccctattgtt tcccaagggc
     1381 ctcctgcccc acgattacga acttgcggtg gtacagagcc ggtttttcga ggtcagctgg
     1441 ggcgagctgg gaaggctcct ctttctcctg gtggctgcgg ctttccttac cgacacgtgg
     1501 ttggctaccg tggatgcagt cagccgcatg caagccgaca tcgtccacat tctgtttccc
     1561 cagagccgcc gcttggaaga acggcactgg tattatctgt ttttggggtt gctcacggcg
     1621 atcaccgcgt tgaccatgcg gcttgatgct ccggggccct tgatcctaat gagcgccgtg
     1681 atcggttttg tgggtacggt gatctttccg gtcgcgcttt atctgctcaa ttaccgtcgt
     1741 ctatccccgc atctaccacc ctgggcgcgc ccctcgcccc aggccgcctg gctccttgct
     1801 gtgagcttcg tggct
//
LOCUS       DASQSL010000966         2185 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_128917, whole genome shotgun sequence.
ACCESSION   DASQSL010000966 DASQSL010000000
VERSION     DASQSL010000966.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2185
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128917"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(107..1084)
                     /locus_tag="VE844_09970"
     CDS             complement(107..1084)
                     /locus_tag="VE844_09970"
                     /inference="COORDINATES: protein motif:HMM:TIGR00413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HZC01667.1"
                     /translation="MHANVRCPSAFFPGLVYLGIIALIAGCGTTVERDSKPEPPVARA
                     IAPPSAEPLSRYGNPNVYEVFGKRYYPLKSSRGFVETGIASWYGPGFHGRLTSNREIY
                     DMYQMTAAHKLLPLPTYVEVTNLQNGHKIVVRINDRGPFYEDRVIDLSYTAAKKLGIL
                     YSGTGIVRVRAIDPSDPKAPRLDFPSPSLVSGLKPRASWAQHPTAVPTSVPAGKSLDR
                     KTATTARLNPSASPPGALDPPRVKTAAIKSIRYYLQLGAFADKTRAEGFRHRIYGMVQ
                     HSVRIQPVLIAGKPIYKVQVGPLATVEAANRVIRTIERYGLRDHRLVVN"
     gene            complement(1059..1994)
                     /gene="mltB"
                     /locus_tag="VE844_09975"
     CDS             complement(1059..1994)
                     /gene="mltB"
                     /locus_tag="VE844_09975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008291564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HZC01668.1"
                     /translation="MDPFIDELVGRHGFDQGALRSLFNKVERLPSVLAAISRPAESKP
                     WYQYRPIFVTPSRAQAGAALWRKHSQLLAQVEKRYEVPAEVILAILGVETFYGRQSGN
                     YRVLDALATLAFHYPPRALFFRSELEHLLLLSREQHLDPRAIQGSYAGAMGLPQFIPS
                     SYRRYAVDFDGDRLTDLWHNPGDAMASVANYLKIHGWENGRPVAVCTRIGGRGYAQFL
                     DGKLEPKIELTRLKQAGITPVTEIQGNPLVALIALETETGGYEYWLGLKNFYVITRYN
                     RSPLYAMAVYQLAQAIRDRYREEHSAGYARKRTLP"
BASE COUNT          487 a          588 c          638 g          472 t
ORIGIN      
        1 acaacgccca cataacgagt cgctttatca tggtcctata ctgacggcta atccgggatc
       61 tcgggatcta tagtttatca gggtgtgaga agattgcggc cttctatcag ttgacgacta
      121 agcgatgatc gcgcaatcca taacgctcga tggtccggat gacccgatta gcggcttcaa
      181 cagtggccag cggacctacc tgcactttgt aaatcggctt gcctgcgatc aacactggct
      241 ggatcctgac cgagtgctgg accatgccat agatccggtg ccggaaccct tcggctctgg
      301 tcttatctgc aaatgctcca agctgcaaat aatagcgtat ggatttgatc gcggccgtct
      361 tcacccgcgg cggatccaac gcccccggcg gggaagccga tggattcaac cgcgcagttg
      421 tagcggtttt cctgtccaaa gacttaccgg cgggcacgct tgtggggaca gcggttgggt
      481 gctgagccca cgaagccctg ggctttagac cggagactag cgaaggagat gggaaatcaa
      541 ggcgtggggc cttgggatca gacggatcaa tcgcgcgcac ccggacaatg ccggtgcccg
      601 agtagaggat ccccagtttc ttggcagcgg tgtaggagag atcgatgacg cgatcctcgt
      661 agaagggacc gcggtcgttt attctcacca ctatcttatg tccgttttgg aggtttgtga
      721 cttctacata ggtaggtaag ggcaggagtt tatgagccgc cgtcatctgg tacatatcat
      781 agatctctct attggaggtg aggcgtccat gaaatccagg accgtaccag gaggcgatcc
      841 cggtttcgac aaaaccgcgg ctgcttttaa ggggataata gcgtttgccg aatacctcat
      901 aaacgttggg attaccgtac cggctcaggg gttcggcaga gggcggcgcg atcgcgcggg
      961 ctacaggcgg ctcgggctta ctgtcccgct cgacggtggt gccacagccg gcgatcaggg
     1021 cgatgatccc caggtacacc aggcctggaa agaaagcact agggcagcgt acgtttgcgt
     1081 gcataaccgg cggagtgctc ctcccggtaa cggtcgcgga tcgcctgagc aagttgatag
     1141 accgccattg cgtacagggg gctacggtta tagcgggtga tcacatagaa attctttaag
     1201 cctaaccaat attcatagcc tcctgtttcg gtctccaagg cgatcaaggc caccaagggg
     1261 ttgccctgga tctccgtgac cggggtgatc ccggcttgtt tgaggcgcgt aagctcaatc
     1321 ttcggttcca gcttgccatc gaggaattgg gcatagcccc gcccgccgat ccgagtacag
     1381 accgctaccg gtcgcccgtt ttcccagcca tggatcttga gataattggc tacgctcgcc
     1441 attgcgtccc ccgggttgtg ccagagatcg gtaagtcggt cgccatcgaa atccacggcg
     1501 taacggcgat agctgctcgg gataaactgc ggcaacccca tcgccccggc ataggaccct
     1561 tggatagcgc gtggatcaag gtgctgttcg cggctgagca gcaacaagtg ctcgagctca
     1621 ctgcggaaaa atagcgcccg cggggggtaa tggaaggcca gggtggcgag ggcatctaga
     1681 acccggtaat taccactctg tctgccataa aaggtctcta ccccaaggat ggctagaatc
     1741 acttcggcag gcacctcata gcgcttttcc acttgggcta gaagctggct atgcttacgc
     1801 cacaaggcgg ccccggcctg ggcacgcgac ggggttacaa agatggggcg gtattgatac
     1861 cagggtttgg actcggccgg acgggagata gccgccagga cgctgggcaa tcgctcaacc
     1921 ttattaaaca gggatcgcag ggccccttgg tcgaatccat gccgtcccac cagctcgtcg
     1981 ataaagggat ccaccgttgt tcgattaagg ccctcggccc ctatacaccc actgcctacg
     2041 gataatatag ttacagtaaa tataaaaggt ctaaccataa cttacccact atatactgat
     2101 cttttatggg tgtgaatggc cgggaaaatg ggggattaga tcctgaggta tccccacata
     2161 tacctgatat ttatcagaga gatag
//
LOCUS       DASQSL010000967         4377 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_185006, whole genome shotgun sequence.
ACCESSION   DASQSL010000967 DASQSL010000000
VERSION     DASQSL010000967.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4377
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185006"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(160..1053)
                     /locus_tag="VE844_09980"
     CDS             complement(160..1053)
                     /locus_tag="VE844_09980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01669.1"
                     /translation="MLIYTIIILVCCFMYGASAVLCKYALQRESAAPVPMSRRQKIVA
                     IVTNKIWLSGVSLSIAANLIIIQIQSVADLTIVYPILNFAYIFTLILGYFFLNELLTK
                     AQWLGVTTTVAGTAILLFVENPSTGQPTNVTHLAVIASLSSLLILALVLAARKDRRRI
                     EEVYYAMCAGVSLGNVETFLKATTNMTVSNIGHFSVLSLESVLEFLTIWPFFILMAFG
                     VIGFIFMQMAYSYGDVSVSVPLITMTQRPLTLFSGYFVFGEAFPLVKIIGIVIILLGV
                     VVITRSTITKSESSHLLSATS"
     gene            complement(1172..3769)
                     /gene="mprF"
                     /locus_tag="VE844_09985"
     CDS             complement(1172..3769)
                     /gene="mprF"
                     /locus_tag="VE844_09985"
                     /inference="COORDINATES: protein motif:HMM:NF033480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional lysylphosphatidylglycerol
                     flippase/synthetase MprF"
                     /protein_id="HZC01670.1"
                     /translation="MTINAATEEPRSESSGWAGRLVKKLPVQIGAFLSFAIVCLALWV
                     AYRTLQKIQLGDVLGHIWALSPLSIFLAFGATAGSYAAVTGFDVVALRHIDRPLPYAC
                     AGLTGFLASAFGNNLGFAVVTGGALRYRMYSQAGLSALEVAGVSVLCSLTAALGTGFI
                     LTLSMLFGTGEAAESAFHLPPALRRVIGGLMLAVMATYITVAALRPMTIRTRNWSLKL
                     PSAKTTSAQIALATTDLMLVGTLIYVLLPVHTSTNFFVFLGVFALALVAGAVSNVPGG
                     IGVFESVMLLGLPEVPPAALLGAMLLFRFIYYVVPLGLAATMLAVHEATLQRARIERA
                     RDTAGDWLVEIGPQVMALIIIFSGAMLLFSGAVPAPADRLAWLQDRVPLAVLEISHLA
                     AGAAGLGLIILARGLSLRLNPTYRLTEVLLGIGIVALLLKGLIYEGAVVLAVVLVILL
                     YTRPEFQRQGSFFDQGYPAEWVSTLTAILAVTVWLGLFSYKGLEYSHELWWRFEFDAE
                     FSRFLRTIGAVWALTSGITLVNLLRPDPIPDRPHATSLDQVRRIIKQDPNTRASLALL
                     GDKRFLFSDAGNAFIMYRVKGKSWIALGDPVGPKEEHQRLLWTFRKLCDRYGGWPAFY
                     LVDGEKLSSYVDLGLIPLKLGDDARVPLQSFSLQGAERAELREAHMRVLEQGVDFAIV
                     NSPQVPALLPKLKLVSDDWLAQTKTSERGFSRGFFDPNYMANFPCAVVRKERRIVAFA
                     TLWVSANKEELALDLMRYHRDAPVGIMDFMVMELMLGGQARGYHWFNIGMVPSSLEGH
                     ALAPLWQRVGRLIHRQSEHFHDSLSYRHFAEKLSPLWRPKYLVSPGGLKMTRILRDIA
                     SLIARAKTK"
     gene            complement(4184..>4377)
                     /locus_tag="VE844_09990"
     CDS             complement(4184..>4377)
                     /locus_tag="VE844_09990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01671.1"
                     /translation="VTSIGIFLIGWLYFGIAGQFAILAALLGGWLSAVMYGKVLTGRF
                     RRREEAASHDRERRGEKAR"
BASE COUNT         1111 a         1241 c         1203 g          822 t
ORIGIN      
        1 ctcttacgtc gaactcacgt tatgctaaca acggccgcgt gagcaagaac ttcctcgtgt
       61 tcccgggtca acgggttccg caaggacgag catggcaatt tcatctggcc ggaccatcaa
      121 atcgcgagat tgatcgcccg caggagcggg tgatcttatt tagctggtag ctgacaacag
      181 gtgggaagac tcgctttttg ttatggtgga acgggtgatc accacgaccc caagcaagat
      241 tatcacgatc ccgatgatct taacgagggg gaacgcctca ccaaagacaa agtagccgct
      301 gaacaaggtc agtggacgct gcgtcatggt gatcaaaggt acgctcaccg agacatctcc
      361 gtacgagtag gccatctgca tgaatataaa tccaatgacg ccaaatgcca tgagaataaa
      421 gaatggccag atagtcaaaa attcaagcac actctccaaa gagagcacag agaagtggcc
      481 tatattggac actgtcatat tggtggtcgc cttcagaaag gtttcgacgt tacccaaaga
      541 gacgccagca cacatggcat agtaaacctc ctcgattctc cgccggtctt tgcgggcggc
      601 aagaaccaaa gcaaggataa gcaggctcga tagggaagca atcaccgcca gatgagtgac
      661 attagtcggc tggccggtcg aggggttttc tacaaacaat agtatcgctg tacccgccac
      721 ggtggtcgtc acgcccagcc attgtgcttt ggtaagcagt tcattcagga aaaaatagcc
      781 caggatcaag gtgaaaatat aggcaaaatt caagatcgga tagacgatgg taaggtcggc
      841 gaccgactgt atctggatta tgatgaggtt ggcagcgata ctgagagaga ccccactcaa
      901 ccagatctta tttgtcacta tagccacgat cttttgccgc cggctcatag ggacaggtgc
      961 tgcgctttcc cgctgcaatg catacttaca aagcaccgcg ctcgcgccgt acataaaaca
     1021 acaaactaag attatgatgg tatagatcag cattggttat cctcaaaggg aatatcgtta
     1081 acccactggc taaaacccct tgtcataaag aaatcggtat ttcaaggtgg tggcatgcgg
     1141 tagccgcctc ggataatgcg gtagcttgga ttcacttagt tttggcgcgg gcgatcaggc
     1201 ttgcgatatc ccgcaggatg cgggtcatct tgagcccacc gggtgagacc aggtattttg
     1261 gccgccagag gggcgagagc ttttccgcaa aatgccggta actcaggctg tcatggaaat
     1321 gttcgctttg gcgatggatg agccgcccaa cgcgctgcca gaggggcgca agcgcgtgac
     1381 cttccaagct cgacgggacc atgccgatgt tgaaccagtg atagccacgg gcctgcccgc
     1441 cgagcatcag ctccatcacc ataaaatcca taatgcccac cggcgcgtcg cggtgatagc
     1501 gcatcagatc cagggccaac tcctctttgt tggcgcttac ccagagggtg gcgaaggcca
     1561 cgatacgtct ctccttgcgc accactgcac aggggaaatt ggccatgtaa ttggggtcaa
     1621 agaaaccccg tgagaagcct ctctccgagg tcttcgtctg agccaaccag tcatcggaga
     1681 ccagcttcaa tttgggcaaa agcgcgggca cctggggcga gttcacgatc gcaaaatcga
     1741 cgccttgctc caggacgcgc atgtgcgcct cacgcaactc agcccgctca gcgccttgca
     1801 gagagaaact ctgcaagggg acccgggcat cgtcgcccag tttcaacggt atcaacccga
     1861 gatcgacgta gctcgagagc ttttcaccat cgactagata gaaggcaggc cagcccccgt
     1921 agcgatcgca cagcttgcgg aaggtccaga gcaagcgctg atgctcctcc ttgggaccca
     1981 caggatcccc cagcgcgatc caacttttgc ccttgacccg atacatgatg aaggcgttgc
     2041 ctgcatcgct gaatagaaag cgcttgtcac cgagtaacgc gagactcgca cgcgtattcg
     2101 ggtcctgctt aatgattcgg cgaacctggt cgaggcttgt cgcgtgcggc cggtcgggaa
     2161 tggggtccgg gcgaagcagg ttgaccagcg taataccgct ggtcagggcc catactgccc
     2221 cgatggtccg caggaatcgg gagaactcgg catcaaactc gaagcgccac caaagctcat
     2281 gggagtattc aagccccttg taagaaaata agccgagcca gaccgttacc gccaagatcg
     2341 cggtcaaggt agatacccat tctgcaggat agccctggtc gaaaaacgac ccctggcgct
     2401 gaaactcggg acgcgtatac aacaggatga cgaggaccac agcgaggacc acagcgcctt
     2461 cgtagatcaa gcctttcagc agcaaggcca caatgcctat cccaagtagg acctcagtca
     2521 aacgataggt aggattgagg cgcaaggaca ggccgcgcgc caggatgatg agccctaagc
     2581 ccgctgcgcc cgcggccaga tgggagatct ccaggacggc gagtggaacc cgatcctgca
     2641 accacgccag gcggtccgca ggcgccggaa cggcgcctga aaagaggagc atcgcgccag
     2701 aaaagatgat gatcagcgcc atcacttgtg gcccgatctc gaccagccag tcccccgccg
     2761 tatcccgcgc gcgctcgata cgcgcccgct gtagggtggc ctcatggacg gccagcatgg
     2821 tagcagccag ccccaggggc accacgtagt agatgaagcg gaacaacagc atggcaccga
     2881 gcaatgccgc cgggggcacc tccggcaagc caagcaacat caccgactcg aacacaccaa
     2941 taccaccggg aacgttgctg acagcccccg ccaccagcgc cagcgcaaat accccgagaa
     3001 agacgaagaa gtttgtgctg gtatggacag gcagcaagac atagatcagg gtaccaacca
     3061 gcattagatc ggtggtagcg agtgcgatct gcgcggaggt cgtcttggcg gagggcagct
     3121 tgagcgacca attgcgggtg cgaatcgtca tgggtcggag ggcagccacc gtgatataag
     3181 tcgccatcac ggccaacatc agcccgccga tcacgcgccg taatgcaggc ggcagatgga
     3241 aggccgattc cgcggcttcc ccggtgccga acagcatgga cagggtaagg ataaagccgg
     3301 tgcctaaggc ggccgtcagc gaacacaaca cgctcacgcc cgcgacctca agggcggata
     3361 atcccgcctg cgaatacata cgatagcgga gcgcgccgcc cgtaaccacc gcaaacccga
     3421 ggttgttgcc gaaagccgag gccagaaaac ccgtgagccc ggcgcacgca tagggcaggg
     3481 gacggtcgat atgccgcagc gctacaacgt caaagcccgt gacggcggcg taactaccag
     3541 ctgtcgcgcc aaatgccagg aatatcgata aaggcgatag cgcccaaata tgccccagta
     3601 catcgcctag ctggatcttc tgaagggtgc gatatgccac ccataatgcc agacagacaa
     3661 tcgcaaagct caggaaggca ccgatctgga ccggcagttt cttaacgagc cgacccgccc
     3721 agcccgagct ttcagaacgc ggttcctcgg tggcagcatt tattgtcata ggttttgttt
     3781 gagcccctgc tacatcatgt gttggccgcc gttgagggca ataccggtac tagggcgtgt
     3841 ttgcaaagta gctccgacgc ggctttccga aagagccaga tcgaggagtg gcgcgggtcc
     3901 atggtgagtt tgcaaacacg ccctagttcc atacagtcgc cccacgccat tgccctatgc
     3961 ctaaaactgt cggggtactc ttataagaaa agtgatacag tctggctaat ttagagaaaa
     4021 aataaatttg ataatttaat aagtattatg aatgagtttt taggagcact aggagaatca
     4081 cccactacca acttgaagtt ggtagtgggt gattttgtta tccatttcac gaggttcatc
     4141 tggtccccca agctagcagt ctagcgtaga gtcttagggc acatcagcgg gccttttcac
     4201 cacggcgctc tctatcatgc gatgcagcct cctcccgccg tctaaagcga ccggtcagca
     4261 cttttccata catcaccgct gatagccacc ctcctagcaa cgccgccaga attgcaaact
     4321 gacctgcaat accgaaatat agccacccta tcaaaaagat acctatgctc gtcaccg
//
LOCUS       DASQSL010000968         2472 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_196027, whole genome shotgun sequence.
ACCESSION   DASQSL010000968 DASQSL010000000
VERSION     DASQSL010000968.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2472
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196027"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(31..1386)
                     /locus_tag="VE844_09995"
     CDS             complement(31..1386)
                     /locus_tag="VE844_09995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009280549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HZC01672.1"
                     /translation="MPNTVQFNAELPVIKNSDALWERAQGLIPAGTQTLAKGPTQFSK
                     GVAPKYLVRGKGARVWDADGNEYLDYNMGIGPIILGYCHPEVDEAIRRQLEDGIVFSL
                     MHPLEIELAELMRECIPNTESVRFSKTGCDVTSAAVRLARAFTQREKVLCCGYHGWHD
                     WYIATTDRNAGIPACVAELTHTFNYNAIDSVIDAIDEATACVILEPFVFEREKDNFLA
                     ELRKVCDQNGALLIFDEMWTGFRCALGGAQAFFGVRADLCLFSKAMANGMPISAITGR
                     KEVMSRLEQDVFFFTTFGGETLSLAASIACIDFIRSHGVIPHIAAIGQRLLDGLNRII
                     ADLGIDYLSMVGYPFRTMVNFAPVAGDPLAMKTLVQQELIRRGILWSGIHNLCYAHTQ
                     ADIDYTLAAYAEVLPIVKKAVESGNIRSFLKGEMLQPVFRKTGHFKTKPKATARAASA
                     K"
     gene            complement(1400..2311)
                     /locus_tag="VE844_10000"
     CDS             complement(1400..2311)
                     /locus_tag="VE844_10000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009280550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HZC01673.1"
                     /translation="METYEEAIKDLVYSDERFIIMTAENRAAIRNLPEWIGERFIDVG
                     ICEQTLIGAAAGLALRGRIPVVHALATFLTLRAFEFIRTDVGIPGLPVKLVGSFSGFI
                     SEANGPTHQALEDIALMRGIPNINLWCPADEQDMLIGLKTILTDPAPYYFRYNNSAPV
                     VEHTRDFKPGRAEVFWSLGADVTILTYGMIFGQCYKAAEILRNQGLSVGLVNLRTLKP
                     IDTEVIVAAARRSALLVAIEDHFKIGGLYSIIAETLLEHGVSARTLAIALDGRWFKPA
                     LMADLLEYEGFTAEALASRITERLAQI"
BASE COUNT          520 a          703 c          708 g          541 t
ORIGIN      
        1 gaagcgttcc agcgtgtgca tatataggtc ctatttggct gatgccgctc gggcggttgc
       61 tttgggttta gttttgaagt ggccggtctt cctgaagacc ggttgcagca tttcgccctt
      121 aagaaacgat cgtatgttcc cgctttcaac cgcctttttc actatcggca agacctcggc
      181 ataggccgcg agcgtgtagt cgatatccgc ttgggtatgg gcatagcaga ggttatggat
      241 gccgctccag aggatgccgc gccggatcaa ctcttgctgg acgagggtct tcatcgccag
      301 tggatcgcct gcaaccggtg caaaatttac catagtccgg aagggataac ccaccatcga
      361 gaggtaatcg atgccaagat cggcgatgat ccgattgaga ccatcgagga ggcgctgccc
      421 gatcgcggcg atgtggggga tcacgccgtg gctgcggata aaatcgatgc aggcaatgga
      481 ggctgcaagc gataaggtct caccaccgaa ggtggtgaag aaaaacacgt cttgttccag
      541 gcgtgacatc acctctttgc gcccggtgat cgcagagatc ggcataccgt tggccatggc
      601 cttggagaag aggcagagat cggcgcgcac accgaagaat gcctgggcgc ctccgagcgc
      661 gcagcggaag ccggtccaca tctcatcgaa aatgagcagc gcgccgtttt gatcgcacac
      721 cttgcgtaat tccgcaagaa aattatcctt ttcccgttcg aacacaaaag gctcgaggat
      781 cacacaggcc gtagcctcat cgatggcatc gatcaccgaa tcgatagcgt tgtagttgaa
      841 ggtatgagtc agttcggcga cacaggccgg gatgccggcg ttgcgatcgg tggtggcgat
      901 ataccaatcg tgccagccgt ggtagccaca gcagagcacc ttctcgcgtt gggtgaaggc
      961 ccgcgcgagg cgcacggcgg cactggtcac atcgcagccg gtcttggaaa aacgcaccga
     1021 ttcagtgttg ggaatacatt cccgcatcaa ttcggccagc tcgatctcca agggatgcat
     1081 gagcgagaag acgatcccgt cctccagttg ccggcgtatc gcctcatcga cctcgggatg
     1141 acagtaaccg aggatgatcg ggccgatgcc catgttgtaa tcgaggtatt cgttgccatc
     1201 ggcgtcccaa acccgtgcgc ctttgccgcg cacgaggtac ttgggcgcaa cccctttgga
     1261 gaattgggtc gggcccttgg cgagggtttg ggtgcctgcc gggatcagcc cctgcgcacg
     1321 ttcccagagg gcgtcggagt ttttgatgac aggtaattcc gcgttgaatt gaactgtgtt
     1381 tggcataagt ataagtctct cagatctgtg caagacgctc cgtgatccgg ctggcaagcg
     1441 cctcggccgt aaacccctca tactcgagta gatcggccat gagcgccggc ttgaaccagc
     1501 gtccatcgag cgcaatcgct agtgtgcggg cgcttacgcc gtgctccagc aaggtctcgg
     1561 cgatgattga ataaagtccc ccgatcttga aatgatcctc gatggcgacg agcagcgccg
     1621 atcgcctcgc cgcggccacg atcacctctg tgtcgatggg tttgagtgtc cgcaggttga
     1681 cgagtccaac cgataagccc tgattgcgca ggatctctgc ggctttgtag cactgcccga
     1741 agatcatgcc ataggtcaga atagttacgt ctgcgcctaa gctccagaag acctccgccc
     1801 tgcccggctt gaaatcccgt gtgtgttcca ccaccggcgc gctgttgtta tagcggaaat
     1861 agtaaggcgc ggggtcggtc agaatggtct tgagtccgat caacatatcc tgttcatcgg
     1921 ccggacacca gaggttgata ttagggatac cgcgcatcag cgctatatct tctaaagcct
     1981 gatgggttgg gccattggcc tcggagataa agcccgagaa actaccgacc aatttcaccg
     2041 gtaaaccggg gatcccgaca tcggtgcgga tgaactcgaa ggcccgcaga gtaaggaagg
     2101 tagcgagtgc gtgaacaacc gggatgcgac cgcggagggc cagccctgcg gcagcgccga
     2161 tcagcgtctg ctcgcagatc ccgacatcga tgaaacgctc gccgatccat tctggcagat
     2221 ttctgatggc ggcccgattc tcggcggtca tgatgatgaa ccgctcatcg gagtatacaa
     2281 gatcttttat tgcttcttcg taggtttcca ctgtcttact ccctattccc ccttccttag
     2341 ctctgtgtac tcttagtcct acactcaaga ttttcctcga tctctttagc ccacggcacc
     2401 atctcccccc gcccctccct tgcctcccga atcaatcgca ggttccgcgc agtggtctca
     2461 ggttcccaaa cc
//
LOCUS       DASQSL010000969         1404 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_113446, whole genome shotgun sequence.
ACCESSION   DASQSL010000969 DASQSL010000000
VERSION     DASQSL010000969.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1404
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113446"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(464..>1404)
                     /locus_tag="VE844_10005"
     CDS             complement(464..>1404)
                     /locus_tag="VE844_10005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01674.1"
                     /translation="LGCLREGMAPHREGAQVEQVLGWIEQARASKGRFRPTLSVGRDG
                     IFVPLRGGVAQEGATATVSVLDRQGQRVGTVYLGQMPESGQGTIPDPLSCLLKAILTQ
                     VDSQSLRLVYVSDEGHHPSTYYHQVLKKMVDPRRPWRQLAWRRIVDFYHACGYVQQLA
                     DTIFGAGAEAQQGAKAMRHVLKTKADGVARVLKSASALRRCQGLCGQAKLYHQAYRYI
                     KKRPRWMRYHLYKRQKLPLGSGITAAACKIIFTQRFKRSGMSWTIAGGQVILDLRVIR
                     LSGVWHEVHQRYLASKPLPVSCVDTSKVSYHQPLAA"
BASE COUNT          329 a          437 c          372 g          266 t
ORIGIN      
        1 aataaacaaa cggctacttc ttaccaacga agaaacaaac ctcataatag tacttgttga
       61 cgcggctatt gacataaaaa tagagtcttt gctagtatac acccactgtc catatggcaa
      121 aaatcctttt gaacaacagt gtccctcatt ctcccgcaga catctttgag cagcaaacca
      181 aaaccaataa tgagcacaaa acgcacggcg gtgtaaggca agataaggac gcgggattgc
      241 gcgtacgcca agccttgcaa cagcctgtga tgctctccaa tgacccgcgt acgcccccaa
      301 ggaacacaaa atcccaacgt ctacaaaacc gccccactcg gcgcaaactc caccaggtcg
      361 ccgcctgggt ggatgagccc ataatcttgc aactccaaga ccttgcaaga gttcagcgac
      421 ttagcatgtc tcaaacgggt gtgatcgctc cattcccagc gccctatgcc gctagtggct
      481 gatggtaaga gaccttgctc gtgtcgacgc aagagactgg aagcggtttt gaggccaagt
      541 agcgctgatg gacctcatgc cagacaccgc tcaagcggat cacgcgcagg tccaagatca
      601 cttgtccgcc cgcgatcgtc cacgacatac ccgagcgttt gaaccgctgt gtaaagatga
      661 ttttgcaggc ggctgccgta atgccagagc ccagaggtag cttctggcgt ttgtagaggt
      721 gatagcgcat ccaccgcggg cgttttttga tgtagcgata ggcctgatgg tagagcttgg
      781 cctggccaca aagcccctga caccgacgca gcgccgaggc tgactttagc acccgcgcca
      841 ctccatcggc cttagtcttg agcacatgac gcatcgcctt ggccccctgt tgagcctcgg
      901 ctcccgcgcc gaagatggtg tcggccagtt gctggacgta gccgcaagca tgataaaaat
      961 cgacgatccg tctccacgcc agctgacgcc agggacggcg tgggtccacc atctttttga
     1021 ggacctggtg gtaataggtg cttgggtgat ggccctcatc gctgacatag accaaacgca
     1081 ggctctgact atcgacctga gtgagaatcg ctttgagcag acaactgagc ggatccggga
     1141 tcgttccctg accggattct ggcatctgcc ccagataaac ggtccccacg cgctggccct
     1201 ggcggtcgag cacggagacc gtggccgtgg cgccctcctg tgccacgccg ccgcgcagcg
     1261 gcacaaagat gccgtcacgc ccaaccgaca gcgtcggccg aaagcgcccc ttggaggcgc
     1321 gggcctgctc gatccagccc aacacctgct ccacctgagc accttcgcga tgcggggcca
     1381 tgccctcacg cagacagccc agga
//
LOCUS       DASQSL010000970         1745 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_158272, whole genome shotgun sequence.
ACCESSION   DASQSL010000970 DASQSL010000000
VERSION     DASQSL010000970.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158272"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1377
                     /gene="dnaK"
                     /locus_tag="VE844_10010"
     CDS             <1..1377
                     /gene="dnaK"
                     /locus_tag="VE844_10010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_820282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HZC01675.1"
                     /translation="RGDSKIAVYDLGGGTFDISIIEIAGVDGEQQFEVLSTNGDTFLG
                     GEDFDKRIIDYIADEFKKEQGVDLRNDPLALQRLKEAAEKAKIELSSSQQTDVNLPYI
                     TADASGPKHLTLKLTRAKLESLVEDIIERTLEPCRIALKDAGLSASNIDEVILVGGQT
                     RMPKVQETVKAIFGKEPRKDVNPDEAVAVGAAIQAGVLGGEVKDILLLDVTPLSLGIE
                     TLGGVMTKLIEKNTTIPTKAAQIFSTAEDHQTAVTVHVLQGEREMASANKSLGRFDLA
                     DIPPAPRGIPQIEVTFDIDANGILNVSAKDKATSRQQSIIIRASSGLSEAEIQRMVKD
                     AEAHREEDRKFHELVNARNHADALIHATTRSLTDLGDKVAADERREIEAAIEDLKEAL
                     KGDDKSTIETKTNRLAELSGKIAERAYREAQEQAQAGAQTGAKEGDGATREESVVDAD
                     FEEIKEKK"
     gene            1433..>1745
                     /locus_tag="VE844_10015"
     CDS             1433..>1745
                     /locus_tag="VE844_10015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005770880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HZC01676.1"
                     /translation="MAKRDYYEALGLARNATEAEIKKAYRRMAMKYHPDRNPGDKGAE
                     GRFKEVKEAYEVLADARKRAAYDQFGHAGVDASAAASGAGFGGFGGGFSDIFDTVFGD
                     IF"
BASE COUNT          427 a          463 c          538 g          317 t
ORIGIN      
        1 cggggggatt ccaagatcgc ggtctatgac cttggtgggg ggacctttga tatctctatc
       61 atcgagatcg ccggggtcga tggcgagcaa cagttcgagg tgctctccac caatggggat
      121 accttccttg ggggtgaaga cttcgataag cgcatcatcg actatattgc cgatgagttc
      181 aaaaaagagc agggggtgga tctgcgcaac gacccgctcg cgcttcagcg gctcaaggaa
      241 gcggccgaga aggccaagat cgagctgtca tccagccagc agaccgatgt caatctgccc
      301 tatatcaccg cggatgcgag cggccccaag catctcaccc taaagctcac gcgtgccaag
      361 ctcgagtcac tggtggaaga cattatcgag cgcaccctcg agccgtgccg aatcgcctta
      421 aaagacgcgg gcctgagcgc ctccaacatc gatgaggtga tcctggtcgg tggccagacg
      481 cgcatgccca aggtgcaaga gacagtgaag gcaatctttg gcaaggagcc ccgtaaggat
      541 gtcaatcctg acgaggcggt agcggtcggt gccgcgattc aggcgggggt gctcggtggc
      601 gaggtgaagg atatcctgct cttggatgtc acaccgctct cgcttgggat tgagacctta
      661 ggcggggtca tgaccaagct gatcgagaag aatacgacga tccccactaa agcggcacag
      721 atcttctcga cggccgaaga ccatcagacg gcggttaccg tgcatgtgct ccagggtgaa
      781 cgcgaaatgg cctctgccaa caagtcgctg ggccggttcg atctcgccga tattccaccg
      841 gcaccccgcg ggatcccgca gatcgaggtc acctttgata tcgatgccaa cgggatcctc
      901 aacgtatcgg ctaaggataa agctacaagc aggcaacaat ccattatcat ccgggcctcg
      961 agtggcctct ccgaggcgga gatccagagg atggtcaagg atgccgaggc gcaccgtgaa
     1021 gaagatcgca agttccacga actggtcaac gcgcgtaatc acgccgatgc gctcattcat
     1081 gcgaccaccc gctcgctcac tgacttgggt gacaaggtag cggccgatga acggcgggag
     1141 atcgaggcag ccatcgagga tctcaaggag gcgctaaagg gtgatgataa gagtacgatt
     1201 gagaccaaga ccaatagact tgccgaatta tccggcaaga tcgccgagcg cgcttaccga
     1261 gaggctcaag aacaggccca ggcgggcgcc caaacggggg cgaaggaagg cgatggtgca
     1321 actcgggaag aaagcgtagt cgatgccgac ttcgaggaga tcaaggaaaa gaagtaatag
     1381 gttatttcct caggatcgta actcaggagc tactaacccc tcatgacaga gcatggcaaa
     1441 gcgcgattat tatgaagcgc taggtctcgc gcgcaacgcg accgaagcgg aaattaaaaa
     1501 ggcctatcgc cgaatggcga tgaaatatca cccggaccgc aatcctggcg acaagggggc
     1561 agaggggcgg tttaaggaag tgaaagaggc ctatgaggta cttgcagacg ctcgcaaacg
     1621 cgccgcttac gatcaatttg ggcatgccgg tgtggatgcc tcggccgccg caagcggagc
     1681 tggatttggc ggcttcggtg gtggcttcag cgatatcttc gataccgtct ttggcgatat
     1741 ctttg
//
LOCUS       DASQSL010000971         2767 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_185080, whole genome shotgun sequence.
ACCESSION   DASQSL010000971 DASQSL010000000
VERSION     DASQSL010000971.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2767)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2767
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185080"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..525
                     /locus_tag="VE844_10020"
     CDS             <1..525
                     /locus_tag="VE844_10020"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HZC01677.1"
                     /translation="FDTLLIPWANIAQGRLEVVWAPAKAELFAIPLISRLIVSWGAFP
                     VQRGGRDLRAMRRLVDLMRREKVMLFPEGTRSADGWLGRGNRAVGKLIYLARPVVIPT
                     AILGTDRLLAKGRLVPRLFSELEVRFGPPLDLERYYAAEDTKATAEAIIHVVMRSIAR
                     LRGEEEMWLRRFPV"
     gene            501..977
                     /locus_tag="VE844_10025"
     CDS             501..977
                     /locus_tag="VE844_10025"
                     /inference="COORDINATES: protein motif:HMM:NF017103.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DciA family protein"
                     /protein_id="HZC01678.1"
                     /translation="MAEEIPSLRKVLERSIRDLGLQKRLKAEQIIALWPKIVGPAVAK
                     VASPAQFRTGTLFIDVADSVWMQELKFQEGELIGRVNEALGEALVRRLFFQLARVPLP
                     APVQPLEIEPEAPAVKGLDPQQELTLEREVAGVRDPQLREVLKDFRRRLLQARPPS"
     gene            1009..>2767
                     /locus_tag="VE844_10030"
     CDS             1009..>2767
                     /locus_tag="VE844_10030"
                     /inference="COORDINATES: protein motif:HMM:NF024821.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZC01679.1"
                     /translation="MEGRAGHEQNRPSLLLRVVVVLLATGLLVKPAVAGGSDDIPSPG
                     PPPPSETQPSAPRDKLPSAAYFFYMVGYSHELGQRFAEAQTAYRMALEYDRDSPVVFT
                     SLISVMARGGDVRAAISLAEQGIQTHPQYAPLRLLLGNLYTSVRERQAATMQFTEAIR
                     LDPTLEEAYLALGTLYEEERNYTAARTLLEALLSHHPTSFMGHFQLARVLAELKEYAT
                     AETMLQKALSLNPDFDRAWIALGGVYEAQGKDQEALSLYQDALRANPTNNELRVRLGQ
                     LFIKQDNLAAALREYEAMRKADPNNLWLRTRIGLILLEQREPEKALPEFEGVLASYPD
                     DLMARFYLALTYAELNQPTRAIELLDQIREANPTDVDLLIRLAQLYEKLEQPAYTLTL
                     LERALAYDPDNPRVNFSIGLLQSGAKRYPEAIEALRRAVALDQTNDRYYFNLGAAYER
                     LGDFDNAVMALRRAIELNPQSANALNYLGYMYANRGINLDESVELVKRALLIEPDNGY
                     YIDSLGWAYFRKGMLNEAMHELQRAVALVPDDPVIIEHLGDISFELKLFREAQEAWER
                     SLQLQPENEAVAGKLKKVKG"
BASE COUNT          565 a          818 c          833 g          551 t
ORIGIN      
        1 ttcgatacgc tgttgatccc ctgggctaac atcgcgcaag gacggttaga agtcgtgtgg
       61 gcgccagcga aggccgaact gttcgcgatc cccctcatca gccgcctcat tgtcagctgg
      121 ggagcattcc cggtgcagcg gggtggccgg gacttgcggg ctatgcgtcg gctcgtcgac
      181 ctgatgcggc gcgaaaaggt catgctcttt ccggagggca ctcggagtgc agacggctgg
      241 ttgggtaggg ggaaccgcgc ggtgggaaag ctcatctacc tggcgcggcc cgtcgtcatc
      301 cccacggcca tcctggggac ggaccgcttg ctcgccaaag gccgcttggt gccacggctg
      361 ttctcggagc tcgaggtgcg ctttggccct cccctcgacc tcgaacggta ttatgcagcc
      421 gaggatacga aagccacggc ggaagcgatc atccatgtcg tgatgcgaag catcgcccgg
      481 ttgcgtggcg aggaggagat gtggctgagg agattcccag tctgagaaag gtcctggagc
      541 ggtcgatccg cgaccttggt ctacaaaagc gtctgaaggc cgaacagatc atcgccttgt
      601 ggccaaagat cgtcggccca gccgtcgcga aggtcgcttc tccggcacaa ttccgcaccg
      661 gcaccctgtt tatcgacgtg gccgacagcg tctggatgca ggagttgaaa tttcaggaag
      721 gggagttaat cgggcgtgtg aacgaggctc ttggcgaggc gctggtgcgc cgtctcttct
      781 ttcagctggc acgcgttccc cttccggcgc ccgttcaacc gcttgagata gagcccgagg
      841 cacccgcggt aaagggactc gacccccagc aggagctcac gctggagcgt gaggtcgctg
      901 gcgtgcgcga ccctcaactg cgggaagtct tgaaggattt tcggcgtcgc ttgttgcagg
      961 cccgtccccc ctcgtgatcg cagacgggac ggctaggaag gatattccat ggaagggcgt
     1021 gcagggcatg agcagaacag accttcgtta ctcctcagag tcgtggtggt cctgctcgcc
     1081 accggtctac tcgtcaaacc ggctgtagcc gggggttcag acgacatccc ctctcccgga
     1141 cctcccccgc ccagcgagac ccaaccgagt gcaccgaggg acaaactgcc ttcggcagcc
     1201 tatttcttct acatggtggg gtattctcac gagctgggtc agcgcttcgc agaggcgcag
     1261 acagcgtatc gaatggccct cgaatacgac cgtgactctc cggtggtgtt caccagtctg
     1321 atctcggtga tggcgcgagg tggtgatgtg cgcgctgcta tcagccttgc cgaacagggc
     1381 attcaaacgc atccgcaata tgcccccttg cggttgctcc ttgggaatct gtatacgagt
     1441 gtccgcgagc gccaggctgc gaccatgcaa ttcacagagg cgattcgact cgatcccacg
     1501 ctcgaggagg cctatttagc gctcggcact ctgtatgagg aggagcgaaa ttatacggcc
     1561 gcccgtacgt tgttggaagc gctgctcagc caccacccca cgtcgttcat gggacatttt
     1621 caactggcgc gtgtgctggc ggaattgaaa gagtatgcca cggccgaaac gatgttgcaa
     1681 aaggctctgt cactgaaccc tgatttcgac cgggcctgga tcgctctggg cggggtctat
     1741 gaggcccagg gcaaagatca agaagcgctc agcctgtatc aggacgcctt gagggcgaat
     1801 cccacgaaca acgaattgcg tgtccgtctg gggcagctat ttatcaagca ggataacctg
     1861 gccgcggcgc tccgtgagta tgaagcgatg cgtaaagccg acccaaacaa cctttggttg
     1921 cgtacgcgaa ttggtctcat tctgctcgag caacgggaac cggagaaggc cctcccggag
     1981 tttgaaggcg tcctcgcttc ttacccagac gacctgatgg cccgttttta tctggccctc
     2041 acctatgcgg agttgaacca gccgactcgt gccatcgagc tactggacca gattcgcgaa
     2101 gccaacccca ccgatgtcga tcttttgata cgactggcgc agctctacga aaaactcgaa
     2161 caaccggcct atacgctcac gctcctcgaa cgagctctgg cttacgatcc cgacaacccg
     2221 cgcgtcaatt tctccatcgg cctgctccaa tcaggggcga agcgttatcc ggaggcgatc
     2281 gaagcactca ggcgcgcggt ggcgctggac cagaccaacg atcgctacta ctttaatctc
     2341 ggcgccgcct acgaaaggct gggggatttc gataacgctg tgatggccct gcgcagggcc
     2401 atcgagctca atccacaaag cgccaatgcg ctcaactacc tgggctacat gtatgccaac
     2461 cgtgggatca atctcgatga gtccgtcgaa ctcgtcaagc gggcactcct gatcgagccg
     2521 gataatggct actacatcga tagcctaggc tgggcctatt tcagaaaagg gatgttaaac
     2581 gaggcgatgc acgaactcca acgtgccgta gcgctagtcc ctgacgaccc ggtgatcatc
     2641 gagcatttgg gcgacatttc tttcgagctc aaactgttcc gcgaagccca ggaagcctgg
     2701 gagcgctctc tgcaactgca acccgaaaat gaagcggttg cgggcaagct gaaaaaggtc
     2761 aagggct
//
LOCUS       DASQSL010000972         1845 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_60376, whole genome shotgun sequence.
ACCESSION   DASQSL010000972 DASQSL010000000
VERSION     DASQSL010000972.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1845)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1845)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1845
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60376"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            190..1668
                     /locus_tag="VE844_10035"
     CDS             190..1668
                     /locus_tag="VE844_10035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01680.1"
                     /translation="MSVSHISDAMQTPAFWRLASFIRRQQHQWQERETAPDFERFERE
                     LHEHVMALECDLLADELKRYDVTADEVSVDGVAYRPSVESTQRYLRAAGAIEVSRHLY
                     RPTGRGSKSICPLELQAGIVAGLWTPRAARQGAFAMAHLTPRESATLFEEIGGMSPSA
                     SSLDRLPKTLSSRFESQRITWEESLRASERVPEEAAMLAVSLDGVMAPMAKSEIDSQG
                     AMASAAPEANGDGLSPTKRHYREASCGTVSLYDADGQRLSTIRYGRMPESKKATLCAQ
                     LEAECQSIMALRPDLKVVKLADGAEENWRFLEHLDLGLNEVQAAQVETVSITDFYHAA
                     EHLKQACDLIWGAGSVTSKVEFARLRELLKEDEQGVNKVISRLRYRATGRRGQKRDEL
                     EKEIAYFRNQRHRMAYAAYRQAKLPIGSGVVEAACKTLVSSRLKRSGRRWTRAGGQAI
                     LTLRSVIQSGRWQRAWSLISHDFQKPVAIVTANGPTVLDPAA"
BASE COUNT          434 a          478 c          546 g          387 t
ORIGIN      
        1 tgctgcccgt gccctaaaaa tacatgagca agctcatgca tcaaggtata ccaaaaccag
       61 ttgattctgt tatagcgaaa ggatgggtgt gtgtctgaaa ttgtgagggt tgcggggttg
      121 acaacgggat aggctccccc acaaagtacg ggtcaacaac ccttgtccgt gcttattagg
      181 aggcgcccta tgtcagtttc tcatattagc gatgccatgc aaacccccgc cttttggcgt
      241 ttagccagct ttatccgccg acagcaacac caatggcaag agcgcgagac ggcgcccgat
      301 tttgaacgct ttgaacgcga gttacacgag catgttatgg ccctggagtg cgacctgctc
      361 gccgatgaac tcaagcgtta tgatgtgact gcggacgagg tcagcgtcga cggggtggcg
      421 tatcgtccca gcgtcgaatc gacgcagagg tatctgaggg ctgcgggcgc catcgaagtg
      481 tcgcgtcacc tctatcggcc cacgggccgc ggcagcaaaa gtatctgtcc actggagctt
      541 caggcgggca tcgttgctgg cctttggacg cctcgcgccg ctcgtcaagg ggcttttgcc
      601 atggcgcatc tgacgcctcg cgaaagcgcc acgttatttg aggaaatcgg cggtatgtcg
      661 ccttcggcga gcagcctgga tcgtttgcct aaaaccctct cgagtcgctt tgaaagccag
      721 cgaatcactt gggaagagag cctgcgagcg agtgaacgtg tgcctgaaga agcggcgatg
      781 ttggccgtct cgctcgatgg ggtgatggcg ccgatggcta agtctgagat cgactcgcag
      841 ggcgccatgg catcggcggc cccagaggcg aacggggacg ggctcagccc gacgaaacga
      901 cactaccggg aggcaagctg tgggacggtg agtctatatg atgccgacgg ccagaggctt
      961 tccaccatcc gctatggacg catgccggag tcgaaaaagg cgacgttatg tgcccaactc
     1021 gaagcggaat gtcaaagtat catggcgctg cgtcctgatc tcaaagttgt caagttggcc
     1081 gatggggccg aggagaattg gcgttttctg gagcatcttg atctggggct caacgaggtg
     1141 caagcagccc aggtcgagac ggtatcgatc acggatttct accatgcggc cgagcacttg
     1201 aaacaagctt gtgacttaat ttggggagcg ggcagcgtca ccagtaaggt cgaatttgcc
     1261 cgcttgcgag agctgttgaa agaagatgag cagggcgtga acaaggtcat cagccgccta
     1321 cgctaccggg ccacaggccg gcgtggacaa aagcgcgacg agttagagaa agaaatcgcc
     1381 tactttcgca accaacgcca tcgtatggct tatgccgctt atcgtcaggc gaagctgccg
     1441 attggctccg gcgtggtcga ggccgcttgc aaaacattgg tgtcgagtcg tctcaaacgt
     1501 tcagggaggc gctggacgag agcgggtggt caagctattt tgacgctgcg tagtgtgatt
     1561 caaagtgggc gatggcaacg cgcctggtct ttgataagtc acgatttcca aaaaccggtg
     1621 gccatcgtaa cggctaatgg gccaacagtc cttgatccgg ccgcttaaag tcacaatttg
     1681 agagacacac ccagagaaat actgcaatct catcatatat tccaccagct caatagtctc
     1741 atctgccaag ctggtcatgg gatgtgacag taatagacca aaagcgacac aaacgcctaa
     1801 caatagtcgt ctaactagaa aatctcttac gtttccaatc acaat
//
LOCUS       DASQSL010000973         1739 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_185132, whole genome shotgun sequence.
ACCESSION   DASQSL010000973 DASQSL010000000
VERSION     DASQSL010000973.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185132"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(61..1416)
                     /locus_tag="VE844_10040"
     CDS             complement(61..1416)
                     /locus_tag="VE844_10040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012119320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01681.1"
                     /translation="MLSLPNTFLSVIAIFAPVFSWSVWLHANVLITGAILAPGTRTVS
                     SILRVMGHADEPPFQNYHRVLNRAVWSPLKASHLLLRLLIAIFVPWGPVVVGLDETIE
                     RRRGDHIQAKGSYRDPVRSSRSQGVKVSGLRWLWAMLLTPIPWAQRVWALPFMTLLCP
                     SERFHERRGRRHQTLAERAWPVIRLVVRGLPGRMVVFVADSSYAVLELLAHGSRLCRA
                     RLITRLRLDAALYDPPPERQPAQKGRPRLKGDRRPTLHAVLDDPETEWITLTSETWYG
                     QGPREVNLCTDTAIWYHSGKPPVPIRWLLIRDPQKEVDPQALLSTDLDHAPEQILNGF
                     VQRGPVEVTFEEARAHLGLETQRQWNDQAIARSTPALLSLYSIVTRVAHLLIKQGKSL
                     VRSTAWYVKTYPTFSDAIAWVRRDLWDHIHFSTSQEETDMVKIPRALLERFMDVMCYA
                     A"
BASE COUNT          389 a          488 c          519 g          343 t
ORIGIN      
        1 cttatgcctt ttcggctatt gttcccttaa ttcatgacgt cttagctcga ctttatccaa
       61 tcacgcggca tagcacatca cgtccataaa gcgttcgagc aatgccctcg ggatttttac
      121 catgtcggtc tcctcttgcg aggttgaaaa atggatatga tcccacaagt cccgtcgaac
      181 ccacgcgatc gcatcggaaa aggtgggata ggttttgaca taccaagctg tgctccgcac
      241 caggcttttc ccctgtttga tcagcagatg agcgacccgc gtcacgatcg aatagaggct
      301 caacaacgcc ggggtactgc gggcaatcgc ctgatcattc cactgccgtt gcgtctccag
      361 tcccagatgg gcacgggctt cttcaaacgt gacttcgacg ggcccgcgct ggacaaaccc
      421 attcaggatt tgctcggggg catggtccag gtcagtcgag agcaaggcct ggggatcaac
      481 ctccttttgg ggatcgcgaa tgaggagcca acggatgggc accggcggtt tgccgctgtg
      541 ataccagatg gccgtatcgg tacagaggtt cacctcgcgt ggcccttggc cataccaggt
      601 ctcactcgtc aacgtgatcc actcggtctc gggatcgtcg aggacggcgt gaagggtggg
      661 acggcggtcg cctttgagtc gaggtcggcc tttctgagcg ggttggcgct cgggcggtgg
      721 gtcatagagc gccgcatcca agcgcaagcg cgtgatgaga cgggcccgac acagtcggct
      781 cccgtgggcc agcaactcca gcacggcata gctgctatcg gcgacaaaga caaccatccg
      841 acctggcaac ccgcgcacca cgagccggat gactggccaa gcccgctccg ctaaggtttg
      901 atggcgtcga ccgcggcgct catggaagcg ctcggagggg caaagcagcg tcatgaaggg
      961 caaggcccag acccgctggg cccagggaat gggggtaagc agcatggccc acagccagcg
     1021 cagcccactg actttgaccc cttgagagcg agaggagcga accggatcgc gatagctccc
     1081 tttggcttga atgtggtcgc ctcgtcgacg ttcaatggtt tcatcgagac ccacgaccac
     1141 cggcccccag gggacaaaga tggcgattaa gagccttagc agcaggtggc tggccttgag
     1201 cggggaccac acggcgcgat tgagcacgcg atgatagttt tgaaaggggg gctcatcggc
     1261 gtggcccatg acgcgcagaa tagagctcac ggttcgcgta ccgggagcga gaatggcacc
     1321 ggtgatcagg acgttagcgt ggagccaaac ggaccatgaa aaaacgggtg caaagatcgc
     1381 aataacactg aggaaagtgt tcggcaggga gagcatgggc aaccatcctt tcggtttgca
     1441 ggactcatgg attctcattg ccgattattg ggcctcaaac tggggcaaat ggataaagtc
     1501 gagcttagat gttgctcgaa aacgcttatc tgagttgtaa ccctttaaat tgcaaatagt
     1561 tatttatcag aatcgttcca gggaccgaga ttaactgggc aagcgcaatc ctgatggcca
     1621 cgcaggcgat ttcaccccgt cccgggccgt ctccaagccc acatggacat gcacctcgat
     1681 tcgaagtaac gtactcccct ctatgcctat ccacaaaccg ggagagggga gccgccatg
//
LOCUS       DASQSL010000974         2346 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_32552, whole genome shotgun sequence.
ACCESSION   DASQSL010000974 DASQSL010000000
VERSION     DASQSL010000974.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2346
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32552"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            290..2017
                     /locus_tag="VE844_10045"
     CDS             290..2017
                     /locus_tag="VE844_10045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016516498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC01682.1"
                     /translation="MYIEIVPNRNSPPALLLREGWREGKKVRKRTLANLTKWPAGLVE
                     GLRLLLRGGTAVPKFDEAFEVVRSRPHGHVAAVLGTLRRVALERLIAPQPSPQRSLVV
                     AMVVARILDPRSKLATARGLGEETRWSTLGELLEAPSTDEEALYAAMDWLVPRQPEIE
                     AKLAKRHLEEGALVLYDVSSTYLEGHTCPLAHWGHSRDGKRDKLQIVFGLLCNREGCP
                     VAVEVFKGNTGDPMTLASQLHKLKERFGLSRVVLVGDRGMITEARIREELKPVQGLDW
                     VTALRAPTIRQLVEAGEIQLSLFDERDRAEIQSSEYPDERLIVCRNPFLAEERAQTRE
                     ALLQATEHELDKIVAATGRTKRRLKGQDRIGLRVGKVLNRFKVGKHFILTITEESFSY
                     QRDAVRIAEEAALDGIYVIRTSVSKEELDTEEIVRAYKELTGVERAFRSYKTVDLKVR
                     PIYHYLANRVRAHVFLCMLAYYIEWHMRKALAPLLFDDHDPSRGQALRGSVVAPAEPS
                     PKAQRKAQTKRTEEGLPVHSFQTLLADLATIIKNRIQPKIPGVEAFDQVTRATPLQQQ
                     ALDLLRVRL"
BASE COUNT          533 a          624 c          676 g          513 t
ORIGIN      
        1 aggggcagtt ggcacgcaag aacgaggtgc tggccgaggt cacggaagcc tatgtcagag
       61 ttaaaaaaaa ctctggggtc ctttgaaggg gcgctgggtc aaacccgagg tgcgtgaggc
      121 ggtagtggaa ctggttgatt acgctgaact tcccgttgta tttttcccag aatcaagata
      181 agtatttgtt tatgcgatat aaagataaga atacgcagtg aatgttgttc ccatgtactt
      241 aatgttgtta cttattgata tactgataat agcatgataa catgttacca tgtatattga
      301 gatcgtcccc aatcgcaact cgcctcccgc gctcctcctg cgggaaggct ggcgcgaagg
      361 caaaaaggtc cgaaaacgga cgctggccaa tctcaccaaa tggcccgctg ggctggttga
      421 aggcctgcgt ctgttgttac gcggggggac agcggtgcca aagttcgacg aggcctttga
      481 ggtggtccgc tcccggccgc acggtcatgt ggccgctgtt ctcggcacgc tgcggcgagt
      541 cgctctggaa cgtttgattg cgcctcagcc cagtccgcaa cgaagcctcg tggtggccat
      601 ggttgtcgca cgtatcctcg acccgcgctc caagctcgcc acggctcgag ggctgggaga
      661 ggaaacgcgg tggagcacct taggtgaact gcttgaggcc ccctccaccg atgaggaggc
      721 actgtatgcg gcgatggact ggttggtccc aagacaaccc gagattgagg cgaagctggc
      781 caaacggcat ttggaagaag gggctcttgt gctctatgat gtaagctcta cttacctcga
      841 aggccacacc tgcccattgg cccactgggg tcattcccgc gatgggaaga gggataagct
      901 gcagatcgtc tttgggttgt tatgcaaccg ggaggggtgt ccggtggcgg tggaggtgtt
      961 caagggcaat accggcgacc ccatgacgtt ggcctcgcaa ctccataagc tcaaggaacg
     1021 cttcgggctc tcccgggtgg tgctggtagg tgaccggggg atgattacgg aagcgcgtat
     1081 ccgggaggag ctcaaacctg ttcaaggtct ggattgggtt acggcgttgc gggcgccgac
     1141 gatccgtcag ttggtagagg cgggcgagat ccagctctcc ctgttcgacg agagggacag
     1201 ggccgagatt cagagctctg agtaccccga tgaacgcttg attgtttgcc gaaatccttt
     1261 cttggctgaa gaacgcgctc aaacacggga ggcattgctt caagccactg agcacgaact
     1321 ggataagatt gtcgccgcaa cagggagaac caagcgccgc ttaaagggcc aagaccgaat
     1381 cggactgcgg gtgggcaagg tgctcaaccg ctttaaggtg ggcaaacact ttatcctcac
     1441 gatcaccgag gagagcttct cttaccaacg cgatgctgtc cgtatcgccg aggaggcggc
     1501 cctggatggc atctatgtca tccgcaccag tgtctctaaa gaagagctcg ataccgagga
     1561 gatagtgcgg gcttacaaag agctcacggg ggtcgaacgg gcatttcgca gttataagac
     1621 ggtggatctc aaagtccggc ccatctatca ctacctggcc aaccgcgtcc gcgcccatgt
     1681 ctttctctgc atgctggcct attatatcga gtggcatatg cgaaaggcct tggcgcccct
     1741 gctcttcgat gatcacgacc cctctcgcgg tcaggcacta cggggatctg ttgtggcacc
     1801 ggctgagcct tccccgaaag cccaacgcaa ggcccaaacc aagcgcaccg aagaggggtt
     1861 gcctgtgcat agctttcaaa ccttgctggc cgaccttgcc accatcatca aaaaccgcat
     1921 ccagcccaag atcccgggcg tggaggcctt cgaccaggtc acacgagcta cacctctgca
     1981 gcagcaggcc ttagatcttc tcagggtgcg cttgtaacgt tcccagtaga cacacgctga
     2041 ttttttacat ttcacagcgt taacaataag ttacattcat tctcaccagg aagttcggtg
     2101 taataattac caaaactggc tctcagtgag ggagacacgg gtatcggaac agctatagaa
     2161 tgaccttagc ggcggaagcg tcggctcttg ccccaacact gtataaaaaa tgagtgctgt
     2221 gtagtacatc tgccgagaaa ttcatataca ccccaagata tcaaaggctt gcctgtatag
     2281 gtcccttgag ttgatcgact tgcctatagc ttacccgctt cgctgtcttt acgaaaagct
     2341 ctccgc
//
LOCUS       DASQSL010000975         1249 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_60417, whole genome shotgun sequence.
ACCESSION   DASQSL010000975 DASQSL010000000
VERSION     DASQSL010000975.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1249
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60417"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            113..841
                     /locus_tag="VE844_10050"
     CDS             113..841
                     /locus_tag="VE844_10050"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01683.1"
                     /translation="MKQVCQKLDQPPLALYDNEYGSGIFLKETDPIPGDLLLRVRPNR
                     KLRRSAPPYSGNGRPSMHGAVFRLGDPTTWGKPDEEWEFDDPKLGHVRLQRWNTLHFE
                     QAPKRIITLFRLERLEARGTRRDPQGVWLGYCGKELPRNSEAWREYLNRFVVEHWYRF
                     IKQSLNWTRPRLSTPGQSELWSTRVIIAYWQLWLARSVVAHCPRPWQKAQPELTPGRV
                     YQAMGGVLATIGTPTAVPKTQAHH"
     gene            837..1249
                     /locus_tag="VE844_10055"
                     /pseudo
     CDS             837..1249
                     /locus_tag="VE844_10055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011237251.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ISAzo13 family transposase"
BASE COUNT          277 a          374 c          368 g          230 t
ORIGIN      
        1 ggtccggcca gcccctcggt ctaaccagaa gacttccggc agttggtttt tgccgttgtt
       61 gcacgagcgc attgaaagca ctacgacgcc ttccaagaag gctgccgagc aattgaagca
      121 ggtctgccag aaactcgatc agccaccgct ggctctctac gataacgagt acggcagcgg
      181 tatatttctc aaagagacgg acccgatccc aggcgatctg ctcttgcgcg tgcgccccaa
      241 ccgcaagctg cgccgctccg cgccgcccta cagcggcaat ggccggccgt caatgcacgg
      301 cgcggtgttc cggctcggcg atccgacgac ttggggcaag cccgacgaag aatgggagtt
      361 cgatgatccc aaactcggtc acgtgcgcct tcaacgctgg aacactttgc atttcgagca
      421 agcgcccaag cgtatcatca ccctgtttcg cctcgaacgg ttggaagcgc gaggcacgcg
      481 ccgcgatccg cagggggtct ggctcggcta ttgtggcaaa gagttaccgc gcaactctga
      541 ggcgtggcgc gagtacctga accgttttgt agtcgagcac tggtatcgct tcatcaagca
      601 atcattgaac tggacgcggc cgcgcctctc gacgcccggg caaagtgagc tgtggagcac
      661 acgggtaatc atcgcctact ggcagttgtg gctggcgcgt tcagtggtcg cccattgtcc
      721 gcgtccgtgg caaaaagccc agccggaatt gaccccgggg cgggtgtatc aagcgatggg
      781 aggggttttg gcgacgattg gtacacccac cgccgtgccc aaaactcaag cgcaccactg
      841 acacggataa gaccctttgc accgacctgg aaagtctcat cgagccggtg acccgaggcg
      901 atccggagcc gccgttgcgc tggacctcca aaagcattcg caagctggct gaggaactga
      961 gaaggcgcgg acatcagagc agccactgct tggtagccca actccttcac gagatgggct
     1021 acagcctgca ggccaaccgc aagacgcttg aggggagttc gcatcctgag cgcgatgccc
     1081 aatttgagcc tattcaccag aaggtcaagg aatttcaggc cgccgaccaa cccgtcattt
     1141 ctgtcgatac gaaaaagaag gagcttatcg ggacgttcaa aaataatgga ggggagcttc
     1201 gacccaaggg cgacccagag agagtccgtg tccatgattt taagatccc
//
LOCUS       DASQSL010000976         1045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_113494, whole genome shotgun sequence.
ACCESSION   DASQSL010000976 DASQSL010000000
VERSION     DASQSL010000976.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113494"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1045)
                     /locus_tag="VE844_10060"
     CDS             complement(<1..>1045)
                     /locus_tag="VE844_10060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002646569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase (NAD(P)H)"
                     /protein_id="HZC01684.1"
                     /translation="MEVAGIAVSQHMCEHFPYSRTEMFALVKAKKLRTFDDIITSYGQ
                     GQGCEVCKPAITSILAALWNETIINAEHHTLQDTNDRFLANMQRGGLYSIIPRVPGGE
                     ITPDKLITLGETAKQYGLYTKITGAQRIDLFGAQLQQLPDIWEKLVAAGFESGHAYGK
                     ALRTVKSCVGTTWCRYGVQDSVAFAIRLENRYKGVRAPHKIKSAVSGCVRECAEAQGK
                     DFGLVATEHGYNLYVCGNGGAKPRHADLLAADIDEETAVRYIDRFLMYYMMTADKLTR
                     TAVWIEKLEGGIEHLKQVIIEDKLGICGELEEMMQFLVDSYRCEWAEVVKDPEKRRLF
                     RQFVNTDETESCIE"
BASE COUNT          207 a          314 c          275 g          249 t
ORIGIN      
        1 tctcaatgca cgattcggtc tcgtcagtat tgacaaattg gcgaaacagt cgccgttttt
       61 cggggtcttt gaccacctcg gcccactcgc agcgataaga gtccaccaag aactgcatca
      121 tctcctcgag ttcgccacag atgcccagtt tgtcctcgat gatcacctgt ttcaggtgtt
      181 caataccccc ttctagcttc tcgatccaga cggcggtacg cgtcagtttg tcggccgtca
      241 tcatgtagta catcaaaaag cggtcaatgt acctgacggc ggtttcttca tcgatgtcgg
      301 ccgccagcaa atccgcgtgt cggggtttgg cgccgccgtt gccgcagacg taaagattat
      361 agccgtgctc tgtggccacg agaccgaaat ccttgccctg ggcctcggcg cactcccgca
      421 cgcagcccga tacggcactc ttgattttgt gcggggcacg aacccccttg tagcgattct
      481 ccaggcgtat ggcaaacgcc acggaatcct gcaccccata gcggcaccag gtcgtgccga
      541 cacagctttt gacggtgcgc agcgctttgc cgtaggcatg gccgctttca aagccggcag
      601 cgacgagttt ttcccagata tccggcaact gttgcagttg cgccccaaac aaatcgatgc
      661 gctgggcccc ggtaattttc gtatacaggc cgtactgctt cgccgtttcg cccagggtaa
      721 tgagtttgtc cggcgtgatt tcgccccctg gtacacgcgg gataatcgag tacaagccgc
      781 cacgttgcat attcgccaaa aaacgatcat tggtgtcctg cagggtgtgg tgctcggcgt
      841 tgatgatcgt ttcattccac agcgccgcca aaattgaggt gatggcgggc ttacagacct
      901 cacagccctg tccctggccg tatgatgtga taatgtcgtc aaacgtcctc agctttttgg
      961 ctttgaccag ggcgaacatc tcggtgcgcg agtacggaaa gtgctcgcac atatgctgac
     1021 tgaccgcgat tcccgccact tccat
//
LOCUS       DASQSL010000977         1547 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_144899, whole genome shotgun sequence.
ACCESSION   DASQSL010000977 DASQSL010000000
VERSION     DASQSL010000977.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1547
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144899"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            374..685
                     /locus_tag="VE844_10065"
     CDS             374..685
                     /locus_tag="VE844_10065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01685.1"
                     /translation="MGHVEGTDLLSSICLSRTLLLPRSLVLAAVLVVVTGARVALASS
                     HATPLGALAAITTTWILSGRGNIAAAHSILRRQHPEQSACLLGVTEPRESSAFGPGAH
                     R"
BASE COUNT          318 a          425 c          448 g          356 t
ORIGIN      
        1 acatcgattt tgaatactga tgaacgtagg cgaacgtaga cggatgagac caaagatgag
       61 accactaact acgcacccgc gattggtgtg tcggcctgtc gcatgacata agggggcggc
      121 agcaggtatc ccgtcgcgtc ggcgagcttg cccctggcct gctacgtttc gggggctgac
      181 gtggcggata cctgcgcaac tagtgaccta cccgcctcgc cggcccagcc ttggccatcc
      241 cggagcggag gtctcccgga ggcacctgca gttgatcgta agctgggaac tacatgacat
      301 gcccaggaca gcgccgttga gcagcagttt cgactgaccg tgaatagccg tgaaagaccg
      361 ttggttctct cccatggggc acgtggaggg cacggacctt ttatcctcga tttgcttgag
      421 tcggacccta ctcctgcctc gttccctcgt cctggccgct gtgctcgtcg tggtgacggg
      481 ggcaagggtg gcgctggcgt catcgcatgc gacgccgcta ggcgcccttg cggccatcac
      541 cacgacgtgg atactgagcg gccgagggaa catcgcggct gcccattcga tcctccgccg
      601 gcagcatcct gaacagtcgg catgcttgct cggggtcacg gaaccacggg agtcatcagc
      661 atttggccct ggcgctcacc gctgagccaa tagggcaacc ggtttgtcat aaggaaagcc
      721 cggagtgggc tgcgtccaag gcgtttctgt gctgctccca cgtcaggacg agaacagcga
      781 tgatacacga gctactgaca atgtggttga gcatctcttg accggtagct catttaccca
      841 agtaatccgc atgaaacagc tttctggccc gtgagctcga ctagtgcgtg ggaatgtgtg
      901 tttccccgtg gcatacgata agttcccatg tgttgagtag ggggacatat ccacaatagg
      961 gtagcttgtt ggggcgtacg caatcatata caattactct gttgattatg cctagggcat
     1021 agttgagggc aatacatggt acgaaggcga atccgccttc tcttgcgcga atgatgtacc
     1081 agcgctgttg ctctacattc ggatcatttg cttccagtcg tttcagccaa ataatcccac
     1141 cgtccaggac cgggtaggtc atataataag tttctccggt ctcgacgtag ctttcgatac
     1201 ggaatacgtc gtttccatca cgcgtaagct cggagtgcag gcgccatagt ttggaaatga
     1261 ctggccaatc tacattgtat ccgagttgcg cgtcccccga cctgtagatg aagccaccgg
     1321 ttatcctgtg aatgatcatc acgggctcgt tgcccactac gaccttatcg agatggtgct
     1381 ggccactgga cgcagacatg tttcgtcctt tcttcttccc ttgagatact agattaggat
     1441 tacccgttga cgcaaagcgg gtttcccaca ggatagtaga ttatgttgac aaaaagggcg
     1501 gggagctgtt acgcgaccgg cctgggaggt gtagccccgc cgtgcgt
//
LOCUS       DASQSL010000978         2206 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_128972, whole genome shotgun sequence.
ACCESSION   DASQSL010000978 DASQSL010000000
VERSION     DASQSL010000978.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2206
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128972"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1727
                     /locus_tag="VE844_10070"
     rRNA            <1..1727
                     /locus_tag="VE844_10070"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            1826..1942
                     /gene="rrf"
                     /locus_tag="VE844_10075"
     rRNA            1826..1942
                     /gene="rrf"
                     /locus_tag="VE844_10075"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
BASE COUNT          519 a          560 c          688 g          439 t
ORIGIN      
        1 aaccacgcac cgaagcttcg gatgatgttt cgacatcatg gtaggcgagc attctgtagc
       61 tgcgaagcgg caccgaaagg gccgttggag cgatcagaaa agaccctgtc agcataagta
      121 gcgataacgc gggtgagaac cccgcgcgcc gtaaacctaa ggtttcctga gtaaagttaa
      181 tctgctcagg gtaagtcggc acctaaggcg aggccgagag gcgtagtcga tggaaatccg
      241 gttaaaattc cggaaccagt aacgtgtgcc gtggggggac gcagtagggt aggcaagacc
      301 ggtgatggct taccggttga accgtcatat cccgtcgctt tggcaaatcc gggcgacatc
      361 agggtaagga cggggacgaa agtacgcccg cgagggcgga aaaaagttgc tgaccccagc
      421 tgccaagaaa atcctcgttc ggctatacac gcgatctgac cgtaccgcaa accgacacag
      481 gtaggtgggg tgagaatcct aaggcgcttg tgagaacact cgttcaggaa ctcggcaaaa
      541 tgaccccgta acttcgggag aaggggtgcc gtcctccggg acggtcgcag tgaaatgtcc
      601 caggcgactg tttactaaaa acacaggtct ccgcaaagtc gtcaagacga cgtatggggg
      661 ctgacgcctg cccaatgctg gaaggttaag aggaggggtt aggccgcaag gccgaagctc
      721 tgaatcgaag ccccagtgaa tggcggccgt aactataacg gtcctaaggt agcgaaattc
      781 cttgtcgggt aagttccgac ctgcacgaat ggcgtaacga tctgggagct gtcttaacga
      841 gtggcacagc gaacttgtag taccggtgaa gatgccggtt tcccgcatct agacggaaag
      901 accccgtgca cctttactac aacttgatag tgaacgcggg cacagagtgc gcaggatagg
      961 tgggaggctt tgaactcggc ccttcggggt cgggggagcc aacggtgaga taccaccctg
     1021 tgtgcgtctg cgttctaacc tagccccgtc atccggggca gggacactat caggcgggta
     1081 gtttgactgg ggcggtcgcc tcctaaacgg taacggaggc gctcgaaggt tggctcaggc
     1141 tgtttggaaa tcagccgtag agtgtaaacg cataagccag cctgactgtg agacaaacaa
     1201 gtcgaacagg gacgaaagtc ggagttagtg atccggtggt tctgtatgga agggccatcg
     1261 ctcaacggat aaaaggtacg ccggggataa caggctgatc ctgcccaagc gtccacagcg
     1321 acggcagggt ttggcacctc gatgtcggct catcgcatcc tgggggtgca gaagctccca
     1381 agggttcggc tgttcgccga ttaaagcggt acgtgagctg ggtttagaac gtcgcgagac
     1441 agttcggtcc ctatctggtg tgggcggagc aggtttgagg gaatctgtcc ttagtacgag
     1501 aggaccggga tggatccacc tctagtgtac gagttatccc gccaggggta gcgctcggta
     1561 gctacgtgga gcatggataa acgctgaatg catctaagcg tgaagccaga cccaagatga
     1621 gacctgccag tgagactcgt ggtagaccac cacgttgata ggctgggtgt ggaagcgcag
     1681 taatgcgtgt agctgaccag tactaatcag tcccaaggct tgaccgttaa attaactctc
     1741 aagcaacagc tgcggtttgc acagctaagt taagttcact attcgattct caaagctctc
     1801 ttggcgagcg agttctttca agttttccgg tggttatatc gagagggtca cacccgttcc
     1861 catcccgaac acggaagtta agcctctcag agccgatggt actgcgcggg agactgcgtg
     1921 ggagagtagg tcgccgccgg atttaatttt cagagccaag cccgcgccgg atcgtcccgc
     1981 gcgggctttc gttttagaga tcaggctaag cagtcgtact tactacgacg ccctcctgat
     2041 cactcccgca aaccaaacat gcgccggcgg cgttagcccg ttacacgggg tcaggttact
     2101 ggcgatgtgg aaatgtccct ggcccgtcgc ccccgcgtgc cctccggtgc cgcctgtgac
     2161 acggaaaggt acgccatgag cgttcgacgc ggtgcagatg gcaggg
//
LOCUS       DASQSL010000979         1313 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_196063, whole genome shotgun sequence.
ACCESSION   DASQSL010000979 DASQSL010000000
VERSION     DASQSL010000979.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1313
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196063"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(90..1166)
                     /locus_tag="VE844_10080"
     CDS             complement(90..1166)
                     /locus_tag="VE844_10080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007176550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-aminoethylphosphonate aminotransferase"
                     /protein_id="HZC01686.1"
                     /translation="MILLNPGPVNLSERVRQALLRPDLCHREAEFSALQQAIRAKLLE
                     IYDLDPGRWAAVLLSGSGTAAVEAMLTTLVPPHGKVLIIENGVYGERLSRIAEIHHID
                     HQRLSYPWGEGIELAAVEAYLEHRGDLTHVAVIHHETTTGRLNRLADIGALCRRRHID
                     LLIDGVSSFGAEELDFRSWGIAACAATANKCLHGVPGVSWVMVRRDVLPAPSAPKRTL
                     YLDLATYCRNQDEGSTPFTPAVQCFYALDEALEELRTQGGWQARHESYRELADRVREG
                     FVSLRIQPLLRREDASVVLNAFHLPYGLSYEDFHDRLKEDGFVIYAGQGTLAKSIFRV
                     STMGAISRQEVERLIAVVNQIMVK"
BASE COUNT          281 a          385 c          372 g          275 t
ORIGIN      
        1 ggtgcccctc cttgaaccac ccccctcctt gctcaaggag gggtggctgc gaagcagccg
       61 gggtggttaa gcataggcgg caacttgggt tatttaacca taatctggtt gaccaccgcg
      121 atcaatcgtt ccacctcttg acggctaatc gcccccatgg tggacacccg gaagatggat
      181 ttcgccaagg taccttgacc ggcataaatc acaaacccgt cttctttcaa ccggtcgtgg
      241 aagtcctcgt agctcagtcc atagggtaga tggaatgcat ttaaaaccac tgaggcatcc
      301 tcgcggcgaa gcagcggttg gatccttaat gaaacaaacc cttccctcac tcgatcggcg
      361 agttcacggt aactttcatg ccgtgcctgc catcctcctt gcgtccgcag ttcctccaag
      421 gcctcatcga gcgcatagaa gcactgcacc gcgggcgtga aaggcgtgct gccttcatcc
      481 tgattacggc aataggttgc aagatccaga taaagggtgc gtttgggtgc gctaggcgcg
      541 ggcaagacat ctcggcgaac catcacccag gagactcccg gcacaccgtg cagacattta
      601 ttggccgtgg ccgcacaggc ggctattccc cacgatctaa agtccaattc ctcggccccg
      661 aagctactta caccatcgat gaggagatca atatggcgcc gtcggcacag cgctccaata
      721 tcggccaatc ggttcaagcg gccggtggta gtctcgtgat ggatcacggc gacatgggtc
      781 agatcccccc tatgctcaag ataggcctca accgccgcta actcgatccc ctctccccaa
      841 ggataggaca gccgttgatg gtcaatgtgg tggatctcgg cgatcctgga gaggcgttca
      901 ccatagactc cattctcgat gataagcact ttgccatggg gcggcaccag tgtggtcagc
      961 atggcctcga ccgccgccgt gcctgagccg ctaaggagca cagccgccca ccgtccggga
     1021 tcgaggtcgt agatctcgag caatttagcc cgtatcgctt gctgcagcgc tgaaaattcc
     1081 gcttcgcgat ggcaaagatc cgggcgcagc agggcttggc gcacgcgttc gctgagattg
     1141 acgggcccag gattgagcag gatcatttct ttaagagccg gaaccgatat gtgtcatcag
     1201 gcggtttaga acatgttcgg gagtctggtt tgggcggggc aggtctgcta tcgtgccagt
     1261 gcggatcttg aggtgcccaa accttggacg cccgtgagca ggggcggcaa aca
//
LOCUS       DASQSL010000980         1325 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_22161, whole genome shotgun sequence.
ACCESSION   DASQSL010000980 DASQSL010000000
VERSION     DASQSL010000980.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1325
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22161"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..562
                     /locus_tag="VE844_10085"
     CDS             <1..562
                     /locus_tag="VE844_10085"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC01687.1"
                     /translation="DYILRSTSMGMQAMPGFWVALMAIVFLISAFGWIPSVYYAHLWE
                     DPIQNLKVLWLPALIVGLRGTAEILRMTRSSVLEVLHEDFVRTAHSKGLSSRRILAVH
                     VLRNALLPVTTLAGFEVVFALSGQIIMEQIFNLPGIGKLFIQAVAARDYPVIQAIVMF
                     IAGVVLLANLVVDVMYAWLDPRIRYN"
     gene            663..>1325
                     /locus_tag="VE844_10090"
     CDS             663..>1325
                     /locus_tag="VE844_10090"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC01688.1"
                     /translation="MTTPFQTTSPETIQERILAAPGARRPSGTAYFLYYLRHKPLGTI
                     GLGIVVLMIFIAIFAPLIAPYTYQEQNYQSIRQAPNLNFFFGTDQFGRDIFSRVVYGA
                     RISMMVGFLAVIVGTGAGAIIGLVSGYFMGKVDAIVQRLVDMWMSFPDLILALTIVAV
                     FGNTIPNVILAIAATIMPRGVRVIRSATISIREMDYTTAARAVGASDLRIMLRHVMPN
                     TVA"
BASE COUNT          256 a          383 c          373 g          313 t
ORIGIN      
        1 tgattacata ttgcgctcca ccagcatggg gatgcaagcc atgccagggt tctgggtggc
       61 attgatggct atcgtcttcc tcatctctgc ctttggctgg attccctcag tgtactacgc
      121 ccacctctgg gaggatccga ttcaaaacct caaggtgctg tggctgccag ccctgatcgt
      181 ggggctgcgg ggcactgctg aaatcctgcg tatgactcgc tcctcggtcc tggaagtgct
      241 gcacgaagac tttgtgcgca cggcccattc caaggggctt tccagccgcc ggatactggc
      301 cgtccacgtg ctgcggaacg ccctgctgcc agtaactacc ctggccggat ttgaagtggt
      361 ctttgcgctg agcggccaga ttattatgga gcagatcttc aacctgccgg gcattggcaa
      421 gctgttcatt caggcggtgg cggcccggga ctacccggta atccaggcca tcgtgatgtt
      481 catcgccggc gtcgtgctgc tggccaatct ggtggtagac gtgatgtacg cttggctcga
      541 cccgcgaatc cggtacaact agactttgag tgtccttctt tcgggagttc cagggcaaaa
      601 gatcgaacag ctttccggtt aatcaagcaa gccaacactg aaaccaaggg agggggaaga
      661 tcatgaccac tccatttcag accaccagcc ccgagaccat ccaagaaaga atactggccg
      721 caccaggcgc gcggcggccc agtgggaccg cgtacttcct ttactacctg cgccataaac
      781 ccctgggcac tatcgggctg gggatagtcg tgctaatgat ctttatcgcc atcttcgccc
      841 cgcttattgc cccttacacc tatcaggagc agaattacca gtcgatacga caggccccta
      901 acctgaactt cttctttggc acagaccagt tcggccggga cattttctcc cgggtagtct
      961 atggggccag gatttccatg atggtcggct ttctggcggt aatcgtggga acgggggccg
     1021 gggccatcat cggcctggtc tccgggtact tcatgggtaa ggtggacgct attgtgcagc
     1081 ggctggtaga tatgtggatg tccttcccgg acttgattct ggccttgacc attgtagccg
     1141 tgttcgggaa caccattcct aacgtaattc tggcgatcgc tgccaccatc atgcctcgtg
     1201 gagtgcgcgt catccgctct gcgactattt ccatcaggga gatggactat accacagcag
     1261 cacgggcggt cggtgcttcc gatctgagga ttatgctgcg tcacgtcatg cccaacaccg
     1321 tagct
//
LOCUS       DASQSL010000981         1440 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_8063, whole genome shotgun sequence.
ACCESSION   DASQSL010000981 DASQSL010000000
VERSION     DASQSL010000981.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1440
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8063"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1007)
                     /locus_tag="VE844_10095"
     CDS             complement(<1..1007)
                     /locus_tag="VE844_10095"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZC01689.1"
                     /translation="MTATATHNANGNTTEATLLVAFELSDKTWKLGFTTGHGQKPRER
                     SVPARDQERVLDEIAKAKRRLGLPETAPVVSCYEAGRDGFWLHRFLQVHGITNHVVDS
                     SAIEVNRRSRRAKSDGLDVRKLVTMLIRYHHGERQVWQVIKVPSVEAEDQRHLHRDLE
                     TLKQERASTTTRIKGLLSSHGLQVTSLNKLPEQLDAMRLWDGSPIPPGLRRRVLRVYA
                     HHTFLSEQIAEVDAQRRSLLQTSPGASIDQIRQLMMLKGIGINGSWLLVMEFFAWREF
                     KNRREVGGLAGLTPTPYQSGASLREQGITKSGNRHVRWMITELAWGWLRHQPESALSV
                     W"
     gene            1253..>1440
                     /locus_tag="VE844_10100"
     CDS             1253..>1440
                     /locus_tag="VE844_10100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01690.1"
                     /translation="MISESSSHAKVPARFAQAPWNELTAFWRQLDEQLPDDHLAREIR
                     SAMVHLDLTPLYQTYSNRG"
BASE COUNT          315 a          430 c          365 g          330 t
ORIGIN      
        1 aaccatacac tcagggcact ctcaggctga tggcgcagcc aaccccacgc caactccgtg
       61 atcatccagc gcacatgtcg attacccgac ttggtaatgc cctgctcacg caaactcgcg
      121 ccactttgat acggcgtggg cgttaaaccg gctaagccgc ccacttcccg acgattcttg
      181 aactcgcgcc aggcgaaaaa ttccatcacc aacaaccatg acccattgat cccaatccct
      241 ttgagcatca tcaactgtcg gatttggtcg atactggctc ccggcgaagt ctgaagcaag
      301 gaccgacgtt gcgcgtccac ctcggcaatc tgctcactga gaaaggtgtg atgggcatac
      361 acccgtaaca ctcgacgacg caaacccggt ggaatcggcg agccatccca aagccgcatc
      421 gcgtcaagtt gctcaggtaa cttgttcaag ctcgtcacct ggagtccatg gctactgagt
      481 aagcctttga tgcgagtggt ggtgctggct cgctcctgct tcagggtttc caagtcccgg
      541 tgcagatggc gctgatcctc ggcctccacc gacggcactt tgatcacctg ccacacctga
      601 cgctcgccat gatgatagcg gatcagcatg gtcaccaact tgcgcacatc gagcccatca
      661 cttttggccc ggcggctgcg tcgattgacc tctatggcgg aggaatccac cacatgattg
      721 gtgatcccgt ggacctgcaa aaaccgatgc agccagaagc cgtctcgacc cgcttcatag
      781 caactgacca cgggggccgt ttccggcaga cccaaacggc gtttggcctt ggcgatttcg
      841 tcgagcacgc gttcctgatc acgtgcgggc acggagcgct ctcgtggctt ttggccatgg
      901 ccggtggtga agccgagctt ccaggttttg tcactcagtt caaaggccac caacagggtc
      961 gcctcggttg tgttaccatt cgcattgtgg gtcgctgtgg ctgtcatggg ctttttcctc
     1021 catggtgtca aattaagagt tctggaaaaa agcttaccca acagcggccc gttgagagaa
     1081 ttagcggaca agcatagtat ctgtgcgcaa ttatttttat attttctggc gctgagtcca
     1141 ccacatttgg cgccaatgct tagcttcccg aggaaaagat ataaatttaa ttttgcatcg
     1201 gtacttagat agtcgcacac cattctgcca ccccaaccag gaggctacag cgatgataag
     1261 cgagtcgtca tcccatgcca aggtcccggc gcgttttgcc caagcgccct ggaatgaact
     1321 tacagcgttt tggcgtcaac tcgatgagca gcttcccgac gatcatcttg ctcgggagat
     1381 tcgatctgct atggtccatc ttgacttaac gccgctttac cagacgtata gcaaccgtgg
//
LOCUS       DASQSL010000982         1464 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_185234, whole genome shotgun sequence.
ACCESSION   DASQSL010000982 DASQSL010000000
VERSION     DASQSL010000982.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1464)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1464)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1464
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185234"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..398
                     /locus_tag="VE844_10105"
     CDS             <1..398
                     /locus_tag="VE844_10105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007877954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZC01691.1"
                     /translation="MVGERGLKLSGGEKQRVAIARTILKNPCILVFDEATSALDSKTE
                     KTIQAELRQVAQNHTTLVIAHRLSTVIDADQILVMEQGRIIERGSHRELLDLGGAYAR
                     MWALQQEEEAKDLERAQDERLTEPIAAVG"
     gene            complement(427..>1464)
                     /locus_tag="VE844_10110"
     CDS             complement(427..>1464)
                     /locus_tag="VE844_10110"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SagB/ThcOx family dehydrogenase"
                     /protein_id="HZC01692.1"
                     /translation="AGLGWKASLLDDLGTEDLRILLGLNESQGPEVEHPDCLIVIGPE
                     ISPKIELNRTLLPQFKELEKQGVPNILSPAHRLWEIIDDVARMAEKSSTVNVYGYSTN
                     GLVTCPDDNTLLHPGVKLRPIIHQRRSAVAMDSRTVITRETFYKMLCRTLPDPACAPF
                     HTLPWPPQVHLALFVHRVKDLAPGLYLLVRDPARLPALKEVIRTDFDWVEAPAVPLGL
                     ALFQLALGDVRTLAQAVSCHQEIAADGCFSLGMIARFEPTLREYGAWFYPCLYWECGA
                     IGQVLYLEAEACGIRSTGMGCYFDNPMQEVLGLEGSDYQSLYHFTVGGALEDPRLQSL
                     PAYPRVKVTCQ"
BASE COUNT          338 a          411 c          422 g          293 t
ORIGIN      
        1 cgatggtggg agagcgcggc ctaaaactct cgggtggcga gaaacagcgc gtcgccatcg
       61 cgcgcacgat cttgaagaat ccctgtatct tagtgtttga cgaagccacc tctgcgctcg
      121 actccaagac tgagaagacc atccaagccg agctcaggca ggtggcacag aaccacacga
      181 ctttggtgat cgcccatcgc ttgtccaccg tcatcgacgc ggatcaaatc ctcgtcatgg
      241 agcagggcag aatcatcgag cgcggcagcc accgcgaact cctcgacctt ggcggcgcct
      301 atgcgcgcat gtgggcgctg cagcaggaag aagaggcgaa ggatttggag cgtgctcaag
      361 atgagcggtt gaccgaaccg atcgccgcgg tcgggtgagg ggatagttca gggcaaggct
      421 accttgttac tggcaggtga ctttcactct ggggtaagcg ggaaggctct gcaacctggg
      481 gtcctcaagc gcgccgccca cggtgaaatg atagaggctc tgatagtcag agccctctag
      541 acccaatacc tcctgcatgg gattgtcgaa gtagcagccc atcccagtgc tccggatccc
      601 acacgcctca gcctcgagat acaacacctg accgatggct ccgcactccc aatacaagca
      661 gggatagaac caggcgccat attccctcaa tgtgggctca aagcgagcga tcatccctaa
      721 gctaaaacag ccatctgctg cgatctcctg gtgacaggag acggcctgcg ccagagtgcg
      781 gacatcccct aaagcgagtt gaaatagggc taagcccagt ggcacggcag gcgcctcaac
      841 ccaatcaaag tcagtcctta tcacctcttt gagcgccggt agccgcgccg gatcccgtac
      901 aaggagatac agccctggcg ccaaatcctt taccctatgg acgaagaggg cgagatgcac
      961 ttgcggaggc catggtaggg tatggaaagg tgcgcaggca ggatctggca aggttcggca
     1021 gagcatcttg taaaacgtct cacgtgtgat cacagtgcgg ctatccatag ccacggcgct
     1081 ccggcgttga tggataatag gccgcaactt cacacctggg tgaagaagtg tattatcatc
     1141 ggggcacgta actaagccat ttgtggaata gccatagacg ttcacggttg acgatttttc
     1201 ggccattctt gccacgtcgt cgataatctc ccacagccgg tgcgcgggac tcagtatatt
     1261 ggggacccct tgcttttcaa gttctttaaa ttgtgggagc agcgtgcggt taagttctat
     1321 cttggggctg atctcggggc cgataacgat gaggcaatca ggatgttcga cctcgggccc
     1381 ttgggattca ttcaatccaa gcagtatgcg tagatcctca gtgccaaggt catccagcag
     1441 gcttgctttc cagccaagcc cggc
//
LOCUS       DASQSL010000983         1904 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_22239, whole genome shotgun sequence.
ACCESSION   DASQSL010000983 DASQSL010000000
VERSION     DASQSL010000983.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1904
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22239"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="VE844_10115"
     CDS             <1..180
                     /locus_tag="VE844_10115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01693.1"
                     /translation="EGIYGAALETPAQGAWTAYSIEVAFAEDGLFEADQVFTTDVVVR
                     PNSLPRNPNDHCINP"
     gene            362..1156
                     /locus_tag="VE844_10120"
     CDS             362..1156
                     /locus_tag="VE844_10120"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZC01694.1"
                     /translation="MSIKKDGSDLERSVCGFLREPLAFWLFRRAAGTPDARRISSIRD
                     IERLSFMTGDGRRLGGYKLRAVAPQGYLVVAQGNAMLADQIAGELQFFRDLGLDVYLY
                     DYRGYGLSEGKSRLKAIISDYQKIIARLSVQGYRHRFLYGISMGGIILLNAVGAKGDY
                     DALVIDSSPSRISPLSCPEEYDPVNHLPADCSRIKIIGGLRDRVVRPEEMEELERLAQ
                     NRNAQVLKHPDFAHPFQDASSEIHRRRFQEVADFLAQVRRGFTVCR"
     gene            complement(1363..1512)
                     /locus_tag="VE844_10125"
     CDS             complement(1363..1512)
                     /locus_tag="VE844_10125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01695.1"
                     /translation="MLPPERTYLAIGHQLLAKVAIAEQAWDEAQVQVSRALAIVEGAE
                     VPLAA"
BASE COUNT          422 a          528 c          532 g          422 t
ORIGIN      
        1 gagggtatat atggggcagc tttagagacg ccagcccaag gcgcatggac agcctacagc
       61 atcgaggtgg ccttcgcgga agacggtctc ttcgaggccg atcaagtctt cacgacggac
      121 gtagtagttc ggccgaactc gttgccgcgg aaccccaacg accactgtat aaatccataa
      181 ggtagccacg ccccagccgc aacaccgaat acctccacgg agaacttagg tatactggaa
      241 ttaatcagtt cggtgccgtg gtcaaacagg tacacctcaa ctttgctgaa ccgccatgcc
      301 ctcccgctgg gccatcgttc taatcctagt ggcgatgctg atactcggat gcaacggtag
      361 ggtgtctata aagaaggatg gatctgattt agaaaggagc gtctgtggtt tcctgcgtga
      421 gcccctggcg ttctggcttt tccggcgggc ggccgggaca cccgatgcca ggcgcatcag
      481 ctcaatccgg gacatcgaac gcctctcttt catgaccggg gatggccgaa ggctgggtgg
      541 ttataagctg cgcgccgtcg ctccccaggg ctatctcgtg gtggctcagg gcaacgccat
      601 gctggcggat caaattgctg gcgaattgca gttctttcgg gacttgggcc tcgacgtcta
      661 cctttatgac taccgcggct atggactgtc agagggaaaa agccggctca aggccatcat
      721 ttctgattac cagaagatta tcgcgcggct ctctgtccag ggataccgcc atcgtttcct
      781 ctatggcatc tcaatgggcg gcattatcct gttgaatgcc gtaggcgcta aaggggatta
      841 cgacgccctg gtcatcgact cctccccgag cagaatctct cctctgagct gcccagagga
      901 atatgatcct gtcaatcatc tccccgcgga ttgttcccgt atcaaaatca ttggaggcct
      961 gcgcgaccgc gtggtgaggc ccgaggaaat ggaagaattg gaaagactcg cgcaaaaccg
     1021 caatgcgcag gtgctgaaac atcccgattt cgcccatccg tttcaggacg caagctctga
     1081 gatccaccgc cgccggttcc aggaagtggc ggattttctc gcgcaggtgc gtcggggctt
     1141 cacagtgtgt cggtgagcac gttccctctg cgtgatagga tactcttcgt gccaagaaaa
     1201 gatgagcaag ggatgcgcga gcagcgacgg ccgcagcagg tcgttgtcgt ctagcgaatc
     1261 agccagtgcc tggatcacct ccgcgccgcg gcgcctataa gcctcgacct caacggtatg
     1321 tcccttacag cggtgcaact ccgccgccgt cgcatagacc cgctaggcgg ccagtggaac
     1381 ctctgcccct tcaacgatag caagcgctcg cgacacttgc acttgcgctt catcccaggc
     1441 ttgctctgcg atggcaacct ttgccagcaa ctggtgccct atcgccaaat aggtgcgttc
     1501 cgggggcaac attgccagct cgcagagccg tgtggcctca cgccgtgcct gtctgagatc
     1561 tccctgggcc agccagtatt cgcaaaagcc ctgatggaat agcgggtaga agatcctact
     1621 aagaagtcac taatttagac tacacatcaa tcatctgaga gcttattcag ccaggcttct
     1681 caacgatgat ttgtagcctt aattaccgtc atcttataga tcgctgcatt gataggttta
     1741 gttctcatgg tataaagtat gaacatgaga aaaaattatg ttcgcacatg tgattggaaa
     1801 gagatgcgcc gatttcgggc attggaactc aagcgcgcgg gttggacaca tgcagaagtt
     1861 gccgaagctt tgggggtcac tgagatggcc gtgagtaagt ggat
//
LOCUS       DASQSL010000984         3383 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_102853, whole genome shotgun sequence.
ACCESSION   DASQSL010000984 DASQSL010000000
VERSION     DASQSL010000984.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3383
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102853"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..537
                     /locus_tag="VE844_10130"
     CDS             <1..537
                     /locus_tag="VE844_10130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018991210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0010945 - coenzyme A diphosphatase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HZC01696.1"
                     /translation="ASEDLTALTPAAVLVPLIEHAMTILLTIRTPHLRHHPGQISFPG
                     GCVEPGDRDTVDTALRELHEEIGIASAYVEIVGCLDNHPTVTGFTIMPVVGIVKPGFE
                     LSLDTFEVAEAFEIPLEFAFDISNYERRQVAYAGEQRSYYRLQYEGREIWGATAGILL
                     GFAKKIRAYRQACNGYYG"
     gene            644..922
                     /locus_tag="VE844_10135"
     CDS             644..922
                     /locus_tag="VE844_10135"
                     /inference="COORDINATES: protein motif:HMM:NF023267.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine-zipper protein"
                     /protein_id="HZC01697.1"
                     /translation="MKNTLVNLTRLSILAVIMGLVAGCAGGATKEELDSVRATAETAL
                     SEARAAKDEAAQASSASQEVKSSADSAVACCEENKTAIDRAFQGRMQK"
     gene            complement(1004..2017)
                     /locus_tag="VE844_10140"
     CDS             complement(1004..2017)
                     /locus_tag="VE844_10140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013031671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HZC01698.1"
                     /translation="MAITLGSALYTASLSADTYLLPAEGNTVIGAVGLIEAIHEDTLP
                     DLAYVYDQGFQEMKLANPRVDTWIPREGTEVVVPSFYVLPDTPREGIVINVPEMRLYY
                     FPKPKEGEAAVVITYPISIGRQDWTTPLGLAKVTGKVKDPTWNPPESIRQEHAAQGDI
                     LPKVVLPGPDNPLGAYALYLNRKGYLIHGTDKPYGIGMRVTHGCIRLYPKDIERLFAE
                     VEVGTPVNIVNQPFKAGWLNGVLYLETHPYLEEHGEAFADSFTQVVGQVTLATQDNQV
                     EVDWDRVQKVVSERTGIPSAISKSSPRNFSNTPADPDLLLVDEVLAEPAEPRQWVESL
                     PGS"
     gene            complement(2169..2579)
                     /locus_tag="VE844_10145"
     CDS             complement(2169..2579)
                     /locus_tag="VE844_10145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007504737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HZC01699.1"
                     /translation="MPDSRNSKTGSALDRVFIFLGSTSALVGVGLGAFGAHGLREKLS
                     EPMMAVYQTAVQYHLIHALGLILIGCIVQGSPPTLLLQAAGWLLLAGILLFSGSLYGL
                     SLTEIHGFGLITPFGGLCLLAGWALLALGIWKPP"
     gene            complement(2557..>3383)
                     /locus_tag="VE844_10150"
     CDS             complement(2557..>3383)
                     /locus_tag="VE844_10150"
                     /inference="COORDINATES: protein motif:HMM:NF019869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HZC01700.1"
                     /translation="LPERWIRSRLQQTITGVTEAIGSYRFDLAAQAIYEFTWDEYCDW
                     YLELSKTLLNGPSSEAAKHGTRQVLVGVLETLLRLIHPFMPFITEELWQRVAPRAGVH
                     GDSIMLQAYPVPEERLIDQGALDEVAWVKAFILGVRRIRAERNIPPNRSLPVQVKHGT
                     PTEHTWLDRNLPYLLSLGRIKSLDRAEEETSQAMATALAGEMTVLVPLADLLIDQEAE
                     RKRLATELNKLREDHARSKAKLANPNYLERAPAEVVAKEQQRCQELEATIARLAEQ"
BASE COUNT          776 a          928 c          907 g          772 t
ORIGIN      
        1 gccagcgagg atttgacggc actgacaccc gctgccgtgc tggtgcccct gatcgagcat
       61 gccatgacca tcctgctcac gatccgtacc ccgcacctgc gccatcatcc cggtcaaatc
      121 agctttcccg gcgggtgtgt cgaaccgggc gatagggata ccgtcgacac cgctttacgt
      181 gagctgcacg aagagatcgg gatcgcgtct gcttatgtgg agatagtggg ctgcctggat
      241 aatcatccca cggtcacagg atttaccatc atgccggtgg tcggcatcgt caaacccggt
      301 tttgaattga gcctggatac gtttgaggta gctgaggcat ttgagatccc ccttgaattt
      361 gcctttgata tctcaaatta tgagcgtaga caggtcgctt atgcgggcga gcagcgttcc
      421 tattataggc tccagtatga ggggcgtgag atctggggcg ctaccgccgg cattctcctg
      481 ggctttgcca aaaaaataag agcctacaga caggcttgta acggatacta tggatagttg
      541 taataaaaaa ttgccaattt attgaaaata gttcatgatt tatcaggttg gagttatcta
      601 ttcccgtggg ggtcagaaat attaagaaga agaggagaga ggcatgaaaa ataccttagt
      661 gaatttaacg cgtttatcca tacttgccgt cattatgggt ctggtggcag gatgtgctgg
      721 tggtgcgacc aaagaagagc tcgattcagt acgagccaca gccgagaccg ccctcagtga
      781 ggcccgggcg gcgaaagatg aagcagcgca ggcttcctct gcaagccagg aagtaaaatc
      841 atctgccgat agcgcggtag cttgttgcga agagaacaaa acggcgatcg atcgcgcttt
      901 ccaaggtagg atgcaaaagt agacgaagcc ttcgcgtccc caaaacaaaa accctgtaac
      961 ccaaaaggtt acagggtttt tttaccatta agctctataa tacctatgag ccaggaagcg
     1021 attcaaccca ttgccgcggt tccgcaggtt cggccagcac ctcatcgacg agcagtagat
     1081 ccggatcagc cggtgtatta ctgaagttcc tgggactgct cttgctgatc gcggagggga
     1141 tcccggttcg ttccgagacc accttttgga ctcgatccca atctacctct acctggttgt
     1201 cctgggtcgc cagtgtgacc tggccaacca cctgagtgaa gctatctgca aaggcctccc
     1261 catgctcttc gagataaggg tgggtttcca gatacagcac cccatttaac catccggcct
     1321 tgaatggctg attgactata ttgaccgggg tcccgacctc gacctcagca aatagccgct
     1381 cgatatcttt aggataaagc cggatacagc catgggtgac ccgcattcca ataccgtagg
     1441 gcttatccgt gccatggata aggtagcctt tgcggttcaa gtagagcgca taggcgccga
     1501 gggggttgtc cggtccgggc aaaaccacct tgggtaatat atctccttga gccgcatgct
     1561 cttggcgaat cgattcgggc ggattccacg tcggatcctt gaccttaccc gttaccttgg
     1621 ccaagcccaa gggggtggtc caatcctggc gcccgatact gatgggatag gtgataacca
     1681 cggcagcctc gccttccttg ggttttggaa aatagtagag ccgcatctca ggcacattga
     1741 taacaatgcc ctctctcggc gtatcaggaa gcacataaaa gctcggcacc actacttctg
     1801 tgccctccct ggggatccac gtgtcaaccc ttggattggc cagcttcatt tcctgaaatc
     1861 cctggtcata cacataggcc agatcaggaa gggtatcttc gtgaatcgcc tcgatgaggc
     1921 ccacagcgcc tattacagtg tttccttcag ccggtaataa atacgtatcg gcgctcaaag
     1981 aagccgtgta taaagcgctt ccgagggtga ttgccattag cccaaaggat cgggtcttcc
     2041 tattactgct attacggggt ttagatgcat gcatgttaac tttccctatc atattgtcct
     2101 cctaacttaa gaaattcatg cctctaagaa gttcaatacc caccgctggc tcttctctaa
     2161 cccaacgatt agggcggctt ccatatccct aaggccagta aagcccagcc cgccagcaag
     2221 caaagtcctc caaagggggt gatgagaccg aacccgtgga tctcggtcaa gctaagtcca
     2281 taaagactac cagaaaaaag caagatcccg gccagtagca accaccctgc cgcttgtaag
     2341 aggagcgttg ggggagaccc ctgcacgata catccgatca ggatgaggcc caaggcatgg
     2401 ataagatgat actgtaccgc tgtctgatag acggccatca tcggttcgga gagtttttcc
     2461 cgcaagccat gggcgccaaa ggcgcctagc cccaccccta ccaatgccga cgtgctgcca
     2521 aggaaaatga acactctatc cagcgctgat ccggttttac tgttccgcga gtctggcaat
     2581 ggttgcctcc aattcttgac aacgctgctg ctccttggcg acgacttccg ccggtgcgcg
     2641 ttcgaggtag tttggattgg ctagcttggc cttggagcgg gcgtggtcct cgcgcaattt
     2701 gttgagttct gtggccaggc gtttgcgctc tgcttcctga tcgatgagaa gatcagccaa
     2761 ggggaccaac acggtcatct ccccagcgag ggcggtcgcc atagcttggg aggtctcttc
     2821 ctcagcgcga tccagtgatt tgatgcggcc aagacttaaa agataaggca ggttcctatc
     2881 caaccacgta tgttccgtcg gcgtgccgtg tttgacctga actggtaagg atcgatttgg
     2941 gggtatattc cgctccgccc ggatccgtcg cacacccagg atgaacgcct tgacccaggc
     3001 cacttcatcg agcgccccct gatcgatcag gcgctcctct ggcaccgggt aggcttgcag
     3061 cataatcgaa tccccgtgta ccccagcgcg gggcgccacc cgctgccaga gctcttcggt
     3121 gatgaagggc ataaaggggt gtatgagccg caacagggtc tccagcacgc ccaccaggac
     3181 ctggcgcgtg ccgtgcttgg ccgcctcgct gctcgggcca ttcaatagcg tcttggataa
     3241 ctcgaggtac caatcgcagt actcgtccca ggtgaactca tagatcgctt gggccgccag
     3301 atcgaaacga taggatccga tagcctcggt gacccctgtt atcgtttgtt gcagccgaga
     3361 gcgtatccag cgttcaggga ggc
//
LOCUS       DASQSL010000985         1254 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_76116, whole genome shotgun sequence.
ACCESSION   DASQSL010000985 DASQSL010000000
VERSION     DASQSL010000985.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76116"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(124..927)
                     /locus_tag="VE844_10155"
     CDS             complement(124..927)
                     /locus_tag="VE844_10155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007907679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZC01701.1"
                     /translation="MNTVYDYPTDLTDDQWELLHPLLPERTWRPGGPGRPPCEVRRIL
                     NDILYLNRTGCQWRLVPKEFGHWSTLYGYFKRWRRDGVWSRVMETLRQWERRYLGRQP
                     EPSAGSIDSQSIKTSTQSEDIGFDGNKKIKGRKRHLLVDTLGLIIAVVVTSADTDDRL
                     GLVELLSQYFAEGVKRLRKIWVDGAYPAEWLEEWVRGLKQTHKIDLEATTNKEGKGFH
                     VIPWRWAVERTFAWLLNDRRHSRDYERLTANSAAMIQVSMIRLLLNRWA"
BASE COUNT          272 a          383 c          320 g          279 t
ORIGIN      
        1 cctccgtcaa ctcatccgtc acctgctcgg caaggacatc aaacccatgg gataaagtgc
       61 tgtagtaccc aggcaggagg tctgaaaagg actcgtcagc ctaagaagct gttgtaaaat
      121 tccttatgcc caccgattca acaacaggcg aatcatgcta acctggatca tcgcagcgct
      181 attggcggtc aatcgttcat agtctcgact atggcgacgg tcattgagca gccacgcgaa
      241 cgtacgctca accgcccagc gccagggaat cacgtggaag cccttcccct ctttgttagt
      301 cgtggcctcc aagtcgattt tgtgcgtctg cttcaagcct cgcacccact cttccagcca
      361 ctcggcagga taggcaccat caacccatat tttccgcagc cgcttgacac cctcggcaaa
      421 atactggctc agcaactcga ccaagcccag gcgatcatcg gtatctgccg acgtcaccac
      481 cacggcgatg atcaacccca gggtgtcgac gaggagatgt cgcttacgcc ccttgatctt
      541 tttgttgccg tcaaagccga tgtcctcgct ttgggtcgac gtcttgatgc tctgtgagtc
      601 aatgctgcca gcggagggtt cgggctgtcg tcctagatac cgtcgctccc actggcgaag
      661 ggtctccatc acacgtgacc agacgccgtc tcgtcgccag cgcttgaaat agccatagag
      721 agtgctccag tggccaaatt ccttgggcac caggcgccat tggcagcccg tcctgttaag
      781 atagaggatg tcgttgagaa tacgtcgcac ctcgcatggc ggccgcccgg gtccgccggg
      841 gcgccatgtg cgttcaggca gcagggggtg gagcaactcc cattggtcat cggtcaaatc
      901 tgttggatag tcatagacgg tgttcatggt tgatcctccc gcatctaatc atgagatttg
      961 tgggagtgtg ctaccatgag cactcgttgg caagtccctc agctgacctc tgatagggtt
     1021 ttacaacagc ttctaaggac gagcccagcc atcttcaaat gaggccaatg gatgatgccc
     1081 gtaatgccag aaaagcccgc caccacgccg attcccgtcc agctctccga atcggagttc
     1141 acgcaattta tcttaccgca cctcaccatg cccaagcgtg gacccaggtg caaactcggc
     1201 taccatcgcg tcttcaacct catcttatgg gtcctgtata cgggcatgca gtgg
//
LOCUS       DASQSL010000986         2117 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_196109, whole genome shotgun sequence.
ACCESSION   DASQSL010000986 DASQSL010000000
VERSION     DASQSL010000986.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2117
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196109"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(6..>2117)
                     /gene="uvrD"
                     /locus_tag="VE844_10160"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
     CDS             complement(6..>2117)
                     /gene="uvrD"
                     /locus_tag="VE844_10160"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006268 - DNA unwinding involved in DNA
                     replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HZC01702.1"
                     /translation="DPLNEAQREAVAASPGNLLVLAGAGSGKTRVLAHRIAWYVQTGQ
                     ATPPGILAVTFTNKAAQEMRGRIEGLLRIAVGGMWVGTFHGIAHRLLRAHWQEARLPQ
                     SFQILDSEDQYRTIRRILRSLELDESRWPPREVQWFINARKEEGLRTAHLEAAADPIQ
                     RQMIRIYRAYEEHCARSGLVDFAELLLCAYELWRDRPELLCHYRQRFRHVLVDEFQDT
                     NTLQYAWLRQLIGTSGCLFAVGDDDQSIYSWRGACVENMRRFQKDFPATRLVRLEQNY
                     RSTATILKAANALIAHNTARLGKELWTRGDKGEPIALYSAFNEQEEARFCIEQVQQWR
                     NQGRAYEETAILYRISAQSRPFEDALRAAVIPYQIHGGFKFYERTEVKDALAYLRLIV
                     HRDDNAAFERVVNTPARGIGERSLEAIRGLARQEQISLWQAAERLIHRRELGARAGAA
                     LQGFLTLIEHLAADTVRLPLAEKIEAIIKSSRLAEHYQKDKTDKGADRIENLQELITA
                     AREFKPDPDSGFDALSGFLAHAALEAGEGQADPFEDSVRLMTLHSAKGLEFPLVFLVG
                     LEEGLFPHQRSSQGPAQLEEERRLCYVGMTRAKQKLILTYADCRRLHGSELYPRPSRF
                     IRELPAELLAEVRLGGGFTPRRYESDSSLRLGQRVLHATFGEGVVLHLEGEGNSTRVQ
                     VNFARAGCKWLMVTYAGLRPV"
BASE COUNT          447 a          649 c          588 g          433 t
ORIGIN      
        1 ctcggctata ctggtcgtaa acccgcgtag gtaaccatca accatttaca gcctgcgcgg
       61 gcaaaattga cctgcacccg ggtagagtta ccctctcctt caagatgtaa taccactccc
      121 tcgccgaagg tggcatggag cacccgttgt cctaatctta ggctactatc ggattcatac
      181 cgccgggggg tgaatccacc gcccaagcgc acctcagcga gcaattcggc aggcagttca
      241 cggataaagc gggaaggtcg cggatagagc tcggatccgt gaagccggcg gcagtcggcg
      301 taggtaagga tcaatttctg cttagcccgg gtcatgccga catagcacag gcgcctctcc
      361 tcctctaact gcgccggacc ctggctactg cgctgatgcg gaaataagcc ttcttccaac
      421 cccaccagga atactagcgg gaattccagt cccttggccg aatgcagtgt catcaagcgc
      481 acactgtcct caaacgggtc cgcctgtccc tcacccgcct cgagggcggc atgggccaga
      541 aacccggaga gcgcatcgaa cccgctatct ggatcaggct taaactcacg tgccgcggtg
      601 atcagctcct ggaggttttc tatccggtcc gcacccttgt cggtcttgtc tttttgataa
      661 tgctctgcca gacggctgct tttgatgatc gcctcgatct tctctgcgag gggtaacctc
      721 actgtgtccg cagcgaggtg ttcaataagg gtaagaaaac cctgtaacgc agcgcctgca
      781 cgcgcgccga gttcgcgcct atgaatcaat cgttccgccg cctgccacaa ggagatctgt
      841 tcctgccgtg caagtccacg tatagcctcg agactacgct cgccaatgcc gcgggcaggc
      901 gtgttcacca cccgttcaaa ggcagcgtta tcgtcacggt ggacgatcaa acgcagatag
      961 gcgagcgcgt ctttgacctc ggtgcgctcg taaaatttga agccgccatg gatctggtaa
     1021 ggaatgactg ccgctctcaa ggcatcttcg aaaggccggg attgggcgct gatccgatag
     1081 aggatagcgg tctcctcgta agcacggccc tgattacgcc attgctggac ctgctctatg
     1141 caaaaccgcg cctcttcctg ctcattaaat gccgaatata aggcaatggg ttcgcccttg
     1201 tccccgcgag tccaaagctc cttacccagc cgagcggtgt tgtgggcaat gagggcattc
     1261 gcggccttga ggatcgtggc ggtcgagcgg taattttgct ccagccgtac caggcgcgtt
     1321 gccgggaaat ccttttgaaa ccggcgcata ttctcaacac aggcccctcg ccaactgtag
     1381 atcgactgat catcatcgcc taccgcaaac aggcaaccgc tcgtcccgat aagctgcctg
     1441 agccaggcat attgaagtgt gttggtatcc tgaaactcat ccaccagcac atggcgaaag
     1501 cgctgccgat aatggcagag caactccggc cggtcgcgcc ataattcata ggcacagagc
     1561 aagagctcag caaaatcaac caggcccgaa cgcgcgcagt gctcttcata ggcccggtag
     1621 atcctaatca tctggcgctg aattgggtca gccgcggcct caagatgagc ggttcgcaat
     1681 ccctcttcct tacgggcatt gataaaccat tgcacctcac gcggtggcca gcgcgactca
     1741 tcgagttcca aggagcggag gatccggcgg atagtgcggt attgatcctc gctatcgagg
     1801 atctggaagg actggggcag gcgggcctcc tgccagtggg ccctgagtaa gcggtgggcg
     1861 atcccgtgaa aggtaccgac ccacataccg ccgacagcga tgcgcagtag accctcgatg
     1921 cgtcctcgca tctcttgagc ggccttattg gtgaaggtta cggccaggat ccccggcggt
     1981 gtcgcctgac ctgtctggac ataccaggcg atgcgatggg ccagcacccg cgtcttgccg
     2041 cttcctgcac cggcgagcac caagagatta cccggcgagg ccgctactgc ctcccgctgg
     2101 gcctcattca agggatc
//
LOCUS       DASQSL010000987         1271 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_144985, whole genome shotgun sequence.
ACCESSION   DASQSL010000987 DASQSL010000000
VERSION     DASQSL010000987.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1271
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144985"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(65..>1271)
                     /locus_tag="VE844_10165"
     CDS             complement(65..>1271)
                     /locus_tag="VE844_10165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01703.1"
                     /translation="SAWSLGELVRHWSHLVLSQQVAVTVAGRVVLLGDHTAVVKDARH
                     MPGVVTVYQDRETQSNPPYYRGHYWGVGGVLVGSLREAFCLPLEARLHQGFAHLGTGQ
                     SNATDRDTQGLMLVQIALDFARRHDILSIVVLDAFFSIGAVFELANSVWSIALKQPYL
                     TLLTRAKKSYVAYLEPLAPTSKPRGRPPKYGDKIKLKTVFETYQHQFLQAECQLYGHV
                     EMISYLALNLLGKPIKGPVRFIFAITSCGPLILMCSDLTMAPLLAIELYCARVRVETM
                     CAMLKGVLGAFAYRFWSKYVPRHSRKPKKNADLKRPQSQHVPTVQQTWLAWERFVMLG
                     CLALGMLQLMSLKFHGSIWNLRTAYRRTRSRALPSERTVKEVLAQELLRDFHHSSPDT
                     FISHFSMDI"
BASE COUNT          301 a          340 c          385 g          245 t
ORIGIN      
        1 tcatcgcatg cacctcctgg ttaaatcgag gttgaatagg gtgtatacga tgcgacaacc
       61 tctcctaaat atccatacta aaatgactta taaaagtgtc cggtgatgaa tggtgaaaat
      121 cccgaagcag ctcttgagcc aagacctcct tgaccgttct ctcagacggc agggcccggc
      181 tacgggtgcg acggtaggcc gtccgcaagt tccaaatcga gccatgaaat ttcagcgaca
      241 tgagctggag catgcccaac gccaggcagc caagcatgac gaagcgttcc cacgccagcc
      301 aggtctgctg caccgttggt acatgctggc tctggggccg cttgaggtcg gcgttctttt
      361 tgggtttgcg tgagtggcgt ggcacatact tggaccagaa gcgataagcg aaagccccca
      421 ggacgccctt aagcatcgca cacatggttt cgacacggac gcgggcacaa tagagttcga
      481 tggccagaag tggcgccatg gtcagatcac tacacatcag gataagaggg ccgcaagagg
      541 tgatggcaaa gataaagcgc acgggtccct tgatcggctt ccccagcagg ttgagagcca
      601 gatacgagat catctccacg tggccataga gctggcactc cgcctggaga aactgatgct
      661 gataggtctc aaagacggtc ttgagtttga ttttatcgcc atattttggg gggcgtccac
      721 gcggctttga cgttggcgcg aggggttcga gataggccac gtagctcttt ttggctcggg
      781 ttaagagggt gagatagggt tgcttgagcg caatggacca aacggagtta gccagctcaa
      841 agacggcccc gatggagaaa aaggcatcta agacgacaat cgaaaggatg tcatggcgcc
      901 gggcaaagtc cagggctatc tgcacgagca tcaggccctg ggtatcgcgg tcggtggcgt
      961 tcgactggcc tgtacctagg tgagcgaacc cctggtgcag acgggcctca agaggcagac
     1021 aaaaggcctc gcgcagcgag cccaccagga cgcccccaac gccccagtaa tggccccggt
     1081 agtagggggg gttactctgg gtttccctgt cttggtatac cgtgacaaca ccaggcatgt
     1141 gccgggcatc cttgaccacg gcggtatgat cgcctagcag gacaactcgg cccgcgacgg
     1201 tcacggcgac ctgttgactc aagacgagat gactccagtg gcgcacaagt tcgcccagag
     1261 accaggcaga g
//
LOCUS       DASQSL010000988         1071 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_185281, whole genome shotgun sequence.
ACCESSION   DASQSL010000988 DASQSL010000000
VERSION     DASQSL010000988.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185281"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            31..459
                     /locus_tag="VE844_10170"
     CDS             31..459
                     /locus_tag="VE844_10170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01704.1"
                     /translation="MATRADKFRQAALTYVGVGVLVIILTLVAGTSAQRGTPPLIGLF
                     IGATFVAIFGVMIYAYAWVTKAWGRRIIAVLTGIFVVTNALRTLQYLINFLGYRLEIN
                     FRALSLAIHPSEFSFPLIFLLCAILMAAITYMLARAAWDL"
     gene            complement(572..>1071)
                     /gene="hpnH"
                     /locus_tag="VE844_10175"
     CDS             complement(572..>1071)
                     /gene="hpnH"
                     /locus_tag="VE844_10175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012098900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="adenosyl-hopene transferase HpnH"
                     /protein_id="HZC01705.1"
                     /translation="RGEDPAEMHAMFDFLMELGVDGMMISPGYAYSKAPDQEHFLRRQ
                     QTIRLFRDILHSGRGLRRWQFNHSPFYLDFLTGERSYQCTPWGNPTRNIFGWQRPCYL
                     MSDGYAKTFQELMETTDWDRYGTGRDPRCADCMVHSGYEATSVLDSTKNPLNMLKAAK
                     ETFFP"
BASE COUNT          209 a          302 c          319 g          241 t
ORIGIN      
        1 atggtctcaa ggggaggaag gtagggagtg atggccacgc gggctgacaa atttcgccag
       61 gcggcgctca cctatgtcgg cgtcggggtg cttgtcatca tcctgacgct tgtggcaggt
      121 acatcggcgc agcgcggcac acctccgttg atcgggctat tcattggtgc gaccttcgtg
      181 gcgatcttcg gcgtgatgat ctatgcttac gcatgggtga caaaagcgtg ggggcgacga
      241 atcatcgcgg ttttgaccgg cattttcgtg gtgacgaatg cgctcaggac actccaatat
      301 ttaatcaatt tcttgggcta tcgcctggaa attaatttca gagccctcag cctcgcgatt
      361 catccgagtg aattttcctt cccgctcatc ttcctgctct gtgccatcct gatggcggcc
      421 attacgtaca tgctggcgcg agccgcatgg gatctctaaa gcagaagggc agccgtctgg
      481 ccgccctgta gagcttaccc catgcccggt cggcgatcgt ggcctgggaa atcatcccct
      541 acatcgtcgg cccctctgag tacgactccc gctaaggaaa aaacgtctcc ttcgcggctt
      601 taagcatgtt cagcggattc ttggtcgaat ccagcactga ggtggcctcg taacccgaat
      661 ggaccatgca gtccgcacag cgtgggtcac gtccggtgcc gtatcggtcc cagtcggtgg
      721 tttccatcag ctcttgaaag gtcttggcgt aaccatcgct catcagatag caggggcgct
      781 gccagccgaa gatgttgcgg gtgggattcc cccagggcgt gcattggtag gaccgttccc
      841 ctgtgagaaa gtctaggtag aagggggaat ggttaaattg ccagcgccgc aggccacggc
      901 cactgtgcaa gatgtcacgg aacagccgta tggtctgctg gcgccgcaga aaatgctcct
      961 ggtcgggggc cttcgaatag gcatagccgg gcgagatcat catgccgtcc acacccaact
     1021 ccatcaggaa gtcgaacatc gcgtgcattt cggccgggtc ttcgccccgg a
//
LOCUS       DASQSL010000989         1081 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_129020, whole genome shotgun sequence.
ACCESSION   DASQSL010000989 DASQSL010000000
VERSION     DASQSL010000989.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129020"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            339..>1081
                     /locus_tag="VE844_10180"
     CDS             339..>1081
                     /locus_tag="VE844_10180"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS701 family transposase"
                     /protein_id="HZC01706.1"
                     /translation="MDVHASPASLPELDNFLSTFKVRFGRREAQFALERYLTGLLTEL
                     PNKNCDTMAQAVPGTHEQRLQGFLTTMQWDEEELSRQRVEKMIAEATIGNGVLIFDDT
                     GFAKQGKASVGVARQYSGTLGKVGNCQVAVTCCYSDPQASWPVAVRLYLPEAWTTDPE
                     RLKRARVPADVTFETKPEIALSLLDQARAWGVPHRCVVADADYGDNPNFLAGLEERNE
                     RYVVAVRCDFQVRPKRRGAPTSQRADQVLA"
BASE COUNT          215 a          295 c          324 g          247 t
ORIGIN      
        1 ccttgacgtg cagcgtgtgt gtcgcttgct gaggtctctc gtactaccag ggtctttctc
       61 ccagggttcc tagtcgattg ctcgacgccg ttgcatgagg tttccggtgt caaagttccc
      121 aggccagcta gtgcattttt agtcgcaaac ccctattcaa ggaaaatgcc ggctgctgtg
      181 tctgctctcc tagcgcgctc agtaatactg agtgcgaagt gttttgatat agttttctat
      241 atctaaacca tctaagcgca gatggtgagg gttgtctagt actactttgt cagttgtgac
      301 tccaggcggt atcctttact aaaaaaggaa ggatgcccat ggatgttcat gccagtcccg
      361 cttcactgcc cgagttggac aactttttat cgactttcaa agtacgcttc ggtcgtcgcg
      421 aagcccaatt tgccttggaa cgctacttga cggggctact gaccgaactg cccaacaaga
      481 attgtgacac catggcccaa gccgtccccg gcacccatga gcagcgcttg caggggtttc
      541 tcaccaccat gcagtgggac gaagaggaac tgagccgcca gcgggtcgaa aagatgatcg
      601 ccgaggccac tatcggcaat ggcgtgctga tctttgatga cacgggcttt gccaagcagg
      661 gcaaggcttc tgttggggtc gcccgtcagt actcggggac attgggcaag gtgggcaact
      721 gccaggtggc ggtgacatgc tgttacagtg acccgcaggc gagctggcct gtggcggtgc
      781 gcttgtacct gcccgaggcc tggacaaccg acccagagcg cttgaaacgg gcccgggtac
      841 ccgcagacgt gacgtttgag accaaacctg agattgccct atcgcttctg gatcaggcac
      901 gcgcctgggg cgtgccgcat cggtgtgtcg tggccgacgc cgactatggc gacaacccca
      961 acttcttggc tgggctggaa gagcgaaacg agcgctatgt ggtggcggta cggtgcgatt
     1021 ttcaagtgcg tcccaagcgt cgcggcgcgc ctacaagtca gcgggccgac caggtgttgg
     1081 c
//
LOCUS       DASQSL010000990         1386 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_8187, whole genome shotgun sequence.
ACCESSION   DASQSL010000990 DASQSL010000000
VERSION     DASQSL010000990.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1386
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8187"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..260)
                     /locus_tag="VE844_10185"
     CDS             complement(<1..260)
                     /locus_tag="VE844_10185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009206188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HZC01707.1"
                     /translation="MNRDAVNVDPQELAKFESLAARWWDPSGELHTLHDINPVRLQYI
                     EKHAGLAGRQVIDIGCGGGILAEAMAKRGASVTGLDASDAAL"
     gene            complement(316..1128)
                     /locus_tag="VE844_10190"
     CDS             complement(316..1128)
                     /locus_tag="VE844_10190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019142887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HZC01708.1"
                     /translation="MLPITFCSATLSHIGKVRKLNEDAYLERPDLGLWVVADGMGGHS
                     AGNVASQLIVDTLNKLEPQQTLAAFISTIEEDLQAVNQELIAMGRERHQIIGSTVVAL
                     LVHGQQCAYLWAGDSRAYLFREGTLTQLSIDHSQVELYVQLGILTREEAVTHPSSNLI
                     LRAIGAEEHLSVESQVLDLQPNDRYLLCSDGLYKHVGDAELAQFLSLGSAAQVARALI
                     DAALAGGGSDNVTVSIIDIRPSSTESYAPGESAYNDDPELTISDPTPPSLGA"
     gene            complement(1173..>1386)
                     /locus_tag="VE844_10195"
     CDS             complement(1173..>1386)
                     /locus_tag="VE844_10195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01709.1"
                     /translation="ENLPPPWRARTRHIDWVLLKGKKNRMDIFEVIWQSRDITFKRIG
                     TGPLTLPNTHLYLHYQDRKLIIDENP"
BASE COUNT          297 a          382 c          400 g          307 t
ORIGIN      
        1 ttgagcgcgg catcgctcgc atcgagaccg gtgaccgagg cgccccgctt agccatcgcc
       61 tcggccagga tcccacctcc acagccgata tcgataacct gccgaccggc aagccccgca
      121 tgcttttcga tatactgcaa acgcacagga ttgatatcat gcaaggtatg gagctcaccg
      181 cttggatccc accaacgggc ggccagggat tcaaacttag cgagttcctg gggatcgaca
      241 ttgaccgcat ctcggttcat tgggggtagc ctatcgtagc ggggatgggg gcctccgtgg
      301 gtggtcatcg agtttttaag cacccaggga agggggagtg ggatcagata tagtgagttc
      361 tggatcgtcg ttatacgcgc tctccccagg agcataactc tccgtggaag acggccggat
      421 atcgataata gagactgtta cattgtcgct gccgccgcct gccagggcgg catcgattag
      481 ggcacgggcc acttgagcgg cggatccgag gctcaaaaac tgggcgagct ccgcatctcc
      541 aacatgctta tacaggccat ccgaacagag caggtagcga tcgttaggct gcagatccag
      601 tacttggctc tcgacggata gatgctcctc agcccctatg gcccgcagga tcagattcga
      661 cgatgggtga gtgacagcct cctcccgggt gaggatgccg agttgcacat acagctcgac
      721 ctgggagtga tcaatgctca gttgggtaag tgtgccctcc cgaaagagat aagcccggct
      781 atcgcctgcc cacaggtagg cgcactgctg gccatggact aacagcgcaa ccaccgtgct
      841 gccgatgatc tggtggcgtt cccgccccat ggctatcagt tcctggttaa ccgcctgtaa
      901 atcttcttca atcgtgctga taaaggcggc caatgtctgt tggggctcaa gcttatttag
      961 ggtgtcgacg atgagctgac tggccacatt accggcgctg tggccaccca ttccatcagc
     1021 cactacccaa agcccaagat cgggcctctc gagataggca tcttcattga gcttgcgcac
     1081 cttgccgatg tggcttaagg tcgcggagca aaaggtaatc ggtaacatgg agagctagat
     1141 cttctcgtaa gccctatccg ctgaccgcgg agtcatgggt tttcatcgat aatcagcttg
     1201 cggtcttggt agtgaagata caggtgggta ttagggagtg tcaatggacc ggtcccaatt
     1261 ctcttgaagg ttatatcccg gctttgccaa atcacttcga agatatccat gcgattcttc
     1321 ttgcccttga ggagcaccca gtcaatatgg cgggtacggg ctcgccatgg cgggggaagg
     1381 ttctct
//
LOCUS       DASQSL010000991         2213 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_32725, whole genome shotgun sequence.
ACCESSION   DASQSL010000991 DASQSL010000000
VERSION     DASQSL010000991.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2213
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32725"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            131..694
                     /locus_tag="VE844_10200"
     CDS             131..694
                     /locus_tag="VE844_10200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005004133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HZC01710.1"
                     /translation="MTTIAAKSMADLIRSRRTIYAFKPEPPPRETVVRAIELARWAPN
                     HRLTEPWRFYWLGPETAEAIARLNADLVTKQKGRAAGQAKLERWRTIPGWIVVTCENS
                     TDPIRAREDLVACACAIQNLSLYLWSEGIGTKWNTGAVTRDPAFYDIIWADPEQETVV
                     GLLWYGYPHEIPETARKPVEEILVELP"
     gene            742..817
                     /locus_tag="VE844_10205"
     tRNA            742..817
                     /locus_tag="VE844_10205"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:775..777,aa:Ala,seq:cgc)
     gene            1223..>2213
                     /locus_tag="VE844_10210"
     CDS             1223..>2213
                     /locus_tag="VE844_10210"
                     /inference="COORDINATES: protein motif:HMM:NF044287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003953 - NAD+ nucleosidase activity
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="toll/interleukin-1 receptor domain-containing
                     protein"
                     /protein_id="HZC01711.1"
                     /translation="MSDVFLSHNSADKPAVESLAHRLRAEGIEPWLDKWNLIPGNPWQ
                     EEIEQALNKCRSCAVFIGPSGIGPWQNAEMRAAIDRRIGKGGFRVVPVLLPGASRGKE
                     SHLPTFLTATTWVEFRDMLDDDEQFRRFICGIRGIEPGPGIAKTPASGQRPYRGLQVF
                     DVEHAPLFFGRCARTDWLLDAIRPGPSAAQSSRFLAIVGASGSGKSSLARAGLLAALR
                     DGKLPDSQNWPQVVLKPGAKPLESLAIALCSHEQLGKGQDPADLIEKFKQHGSRLHWL
                     CRQALHGQPESRRVVILVDQFEEVFSLCGDEDERKAFIDNLLTAATDATGQAIV"
BASE COUNT          470 a          667 c          621 g          455 t
ORIGIN      
        1 ggacgcctat acagcggcca gatcgacgat ctcgtggtcg ttcccctgct cgtattcatt
       61 acactcagat ttatcccgtc agcgctcatc gaggaatgca ggcaaacggc attaaagagg
      121 gaggaccccc atgacgacaa ttgctgccaa atccatggcc gatttgatcc gctcccgacg
      181 cacgatctac gccttcaaac cggagccgcc tccgcgcgaa acagtagtac gcgcaattga
      241 acttgcgcgt tgggcgccta accaccgact gaccgagcct tggcgctttt actggctggg
      301 gcccgagaca gcagaggcca tcgccaggct taatgctgac ttggtcacga aacaaaaggg
      361 cagagcagca ggacaagcaa agctcgaacg ctggcgcact atccccggtt ggatcgtagt
      421 gacctgtgaa aattccaccg atcccatccg cgcccgtgag gatctggtcg cctgcgcctg
      481 tgccatccaa aacctttcac tctacctctg gagcgaaggg attggcacca agtggaacac
      541 cggcgcggtc acccgtgatc cggccttcta tgacattatc tgggctgatc cagagcagga
      601 gacggtggtc gggcttttgt ggtatggcta tccccacgag atacccgaga cagcccgcaa
      661 gccagtcgag gaaattctgg tggaattacc ttaaacatag cactgtgcta gtaagcatag
      721 tataatcggt ttttatatat cggggccgta gctcagccgg gagagcgtcg cgttcgcaat
      781 gcgaaggtcg ggggttcgat cccccccggc tccaccaata aaaataaggt gttgtttata
      841 cttttagcct ggcgccagca actgctaaaa gtttctaatg tcatcctaac gcatagcgct
      901 ttaatttcag tctttaggga ccgcattgcg tcggacctaa atgggaaact ggaaacttaa
      961 tgaaaagaca aatccgcaat gcgttcttac ttagcaattg tccctgcatg cttaatatca
     1021 gtttcttccg ctattaacgg atgcaaatct cagcatagag aaggttgccg ccggagtggg
     1081 ggctgccatc tgtagacacc gcggctaaaa cagagggttt gtcgcgcttc ccgattttgc
     1141 gcgtcaccac cccgcgaagg atatttatcg attcgcgcca cctttttctg cgaactgcgt
     1201 ctaggattga ggtgtcttgc acatgtccga cgtcttcctc tcgcacaatt ccgccgacaa
     1261 acccgccgtc gagtcgctgg cccatcgctt gcgcgcggag ggcatcgagc cctggctgga
     1321 caaatggaat ctgatccccg gcaatccctg gcaggaggag atcgaacagg cattgaacaa
     1381 gtgccgcagt tgcgccgtgt tcatcggccc cagcggcatc ggaccctggc agaacgcgga
     1441 gatgcgtgcc gccatcgacc gccgtatcgg taagggcggg ttccgtgtgg tgccggtgct
     1501 gttgcccgga gccagccggg gaaaagagag ccatctgccg accttcctca ctgcgaccac
     1561 ctgggtcgag ttccgcgaca tgttggacga tgacgagcaa ttccgccggt tcatttgcgg
     1621 tatacgcggt atcgagcccg gaccgggtat tgccaaaacg cctgctagcg gtcaacgccc
     1681 ctatcgtggc ctgcaagtgt tcgatgtgga gcacgcgccg ctgttcttcg gtcgctgcgc
     1741 gcgtaccgat tggctactgg acgccattcg ccccggccca tccgcggctc aatccagccg
     1801 cttcctcgcc atcgtaggcg cgtccggcag cggcaaatcc tcgttggcgc gggccggcct
     1861 gctggctgct ctgcgggatg gtaagctgcc ggacagccag aactggccgc aggtggtcct
     1921 gaagcccggc gccaaaccgc tggaaagcct ggccatcgcc ctgtgcagcc atgagcaact
     1981 gggcaaggga caagatccgg cggatctaat cgaaaagttc aaacagcacg gttcccggct
     2041 ccactggctt tgccgccaag ccctccacgg ccagccggaa tcccgccgcg tggtgattct
     2101 ggtcgatcag ttcgaggaag tattttccct atgtggcgac gaggacgaac gcaaggcctt
     2161 catcgacaac ctgctcaccg ccgccaccga tgccaccgga caggccatcg tgc
//
LOCUS       DASQSL010000992         1272 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_185315, whole genome shotgun sequence.
ACCESSION   DASQSL010000992 DASQSL010000000
VERSION     DASQSL010000992.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1272)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1272)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1272
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185315"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..183
                     /locus_tag="VE844_10215"
     CDS             <1..183
                     /locus_tag="VE844_10215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01712.1"
                     /translation="VFQEPVDGLGHSQAVQDAFDQWGHAHHRRLVLGTAILLSRHTFI
                     SPGSSWGALYSGHSAP"
     gene            complement(355..558)
                     /locus_tag="VE844_10220"
     CDS             complement(355..558)
                     /locus_tag="VE844_10220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01713.1"
                     /translation="MIEALYVGQEPVYHLSRFQDLAVDWSRKAVPELLEYITFIHPGV
                     SASAQQHFSGNDNRIHVLGPGPV"
     gene            complement(637..>1272)
                     /locus_tag="VE844_10225"
     CDS             complement(637..>1272)
                     /locus_tag="VE844_10225"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF013413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane dipeptidase"
                     /protein_id="HZC01714.1"
                     /translation="HGIGIRLAGLTYNRKNYIGDGQYERNDGGLSDFGVAVVQRMNDL
                     GMAIDLSHASFKTAMDAIHFSRTPVAFSHNAAFTLRPVPRCRIDEELTACAQTGGLIA
                     ITAVPNSLSDDPKQDIECVLDHYDYMVRLVGIDHVGIGTDTSVGDHVAFHRVVLGRTP
                     EQLPAPYLNGLESPADGKNIVRGLIRRGYSDTDISKIAGGNALAFFRRVMS"
BASE COUNT          263 a          371 c          371 g          267 t
ORIGIN      
        1 gtgtttcagg aaccggtcga tggtctgggg cactcccagg cagtccagga tgcctttgac
       61 cagtggggcc acgcccacca ccgccgtctg gtactcggga ctgccattct tctctcacgg
      121 catacattca tctccccagg ctcctcttgg ggtgcattgt actccggaca ctcagcccct
      181 tgaaccctca tccgggggga gcggaaaata gatagaaatg cagcggtccc taccttctcc
      241 caaaacgaag ttgccgcctt gcaaaaagga cggcgggcgg atatgtgtct actgcggttg
      301 gaccgcatgg agaagccata cttggacccg gatatccatc cgatggacgt tctactatac
      361 cgggccaggg ccgaggacat ggatacggtt atcattgcca gagaagtgct gctgcgccga
      421 ggcgctcaca ccagggtgga taaaggtgat gtactcaagc aactcaggga ccgcttttcg
      481 gctccagtcg accgccaagt cttggaagcg cgacagatga tagactggct cctgccctac
      541 gtagagcgct tctatcaaag ctggtcatcc gacccaggga cccccataac gtatttaaca
      601 gccgcacctg acgggcgccc agtgaaaggc tcacggctaa ctcatcaccc ttctgaaaaa
      661 ggccagagcg tttcccccgg cgatcttgct aatgtctgtg tcggagtaac cccggcgaat
      721 aagcccccgc acgatgtttt taccatcggc gggagactcc agcccgttca ggtaaggggc
      781 gggtagctgc tcaggcgtcc ggcccaacac cacccggtgg aaagctacgt gatcacctac
      841 actggtatct gtgccgatgc ccacatggtc tatccccacc agcctgacca tgtagtcgta
      901 gtggtccagg acgcattcaa tgtcctgctt agggtcgtcg ctgagggagt tgggcactgc
      961 ggtaatggct atgaggccgc ccgtctgagc acaggctgtc aactcctcat cgattcggca
     1021 tcgggggact ggtctgaggg tgaaagcggc gttatggctg aaggccactg gtgttcggga
     1081 aaagtggatc gcgtccatgg ccgttttgaa ggatgcgtgg gacaggtcga tagccatacc
     1141 caggtcgttc atgcgctgga ctaccgcgac gccaaaatcg ctgaggccgc cgtcgttccg
     1201 ctcatattgg ccgtcgccga tatagttttt gcggttgtag gtgaggccag ccagccggat
     1261 acctatgccg tg
//
LOCUS       DASQSL010000993         4599 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_102871, whole genome shotgun sequence.
ACCESSION   DASQSL010000993 DASQSL010000000
VERSION     DASQSL010000993.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4599
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102871"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(68..499)
                     /gene="ccmE"
                     /locus_tag="VE844_10230"
     CDS             complement(68..499)
                     /gene="ccmE"
                     /locus_tag="VE844_10230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012971371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017003 - protein-heme linkage [Evidence
                     IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HZC01715.1"
                     /translation="MTLRQRRMMAVMVVLVGISAAAALALTAFRKNLLFFYSPTQIVT
                     GEAPQDSPIRLGGLVVEGGVVRKPQSLEVRFDLTDLAHTVTVVYTGILPDLFREGQGI
                     IAHGRMRPDHTFEATEVLAKHDENYMPPEVAGALATAKARP"
     gene            complement(496..708)
                     /gene="ccmD"
                     /locus_tag="VE844_10235"
     CDS             complement(496..708)
                     /gene="ccmD"
                     /locus_tag="VE844_10235"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HZC01716.1"
                     /translation="MLPTLLCLKNRWVDFIDWISTVRDFFSMGGYAFYVWTAYGLAAV
                     VLLGVLGQSLAWHKRVMKRLGQRLKQ"
     gene            complement(683..1804)
                     /gene="mnmA"
                     /locus_tag="VE844_10240"
     CDS             complement(683..1804)
                     /gene="mnmA"
                     /locus_tag="VE844_10240"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015005977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HZC01717.1"
                     /translation="MSAPAPAPFPNTQVIVGLSGGVDSAVSALLLKQQGYEVRGLFMK
                     NWEDDDTEEYCSSRQDLIDAVAVADRIGIDIDAVNFSTEYKERVFSDFLAEYKAGRTP
                     NPDVLCNAEIKFKAFLDHALTAGAAWMATGHYAHIQAQEGRFFLLKGSDPNKDQSYFL
                     HRLGQAQLARSLFPVGGFTKIEVRRMAQRAVLAVYDKKDSTGICFIGERPFRAFLSRY
                     LPVQPGAIRTLAGKTIGEHPGIIYYTLGQREGLGIGGVRDAAEAPWYVVAKDVVDNVL
                     VVTQGHDHPLLFSHTLATTQLSWVSGDPPATPFRCMAKTRYRQSDQTCTITAIDRGRA
                     RVEFDQPQRAITSGQSVVFYKGEICLGGGVIDATHTALP"
     gene            complement(1804..2259)
                     /locus_tag="VE844_10245"
     CDS             complement(1804..2259)
                     /locus_tag="VE844_10245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009206429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HZC01718.1"
                     /translation="MHWTPYVVATAIIERDGRFLMVEEEAEGRIVINQPAGHLEQGET
                     LFEAVKREVLEETAWHIEPEGLVGLYLYAKPYTDIAYLRVCFRGISLKHEPDRPLDQG
                     IARALWLSREEIFNAQYRHRSPLVLRCVDDYLAGKRYPLDVLYHLPFYP"
     gene            complement(2298..2777)
                     /locus_tag="VE844_10250"
     CDS             complement(2298..2777)
                     /locus_tag="VE844_10250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006891789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF934 domain-containing protein"
                     /protein_id="HZC01719.1"
                     /translation="MQVIKDQKIVADSWQQIAGDEELPAGDVIISLGRWQVEREQLLK
                     RTGKLGVCINGDHKLRDIADDLKHFDLIALDFPKLGDGRCFSHARLLRERYGYKGELR
                     AVGYVLRDLLFFMHRCGIDSFQIRDGKDIEDALKAFSEFSVKYQPAADGAPPIYRLR"
     gene            complement(2764..4464)
                     /locus_tag="VE844_10255"
     CDS             complement(2764..4464)
                     /locus_tag="VE844_10255"
                     /EC_number="1.8.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007186124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0050311 - sulfite reductase (ferredoxin)
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite/sulfite reductase"
                     /protein_id="HZC01720.1"
                     /translation="MYHYDRYDQTIVDERVAQFRDQTRRYLAGELTEEEFRPLRLRNG
                     LYIQRYAPMLRVAIPYGLLSSKQLRMLAHIARDYDKGFGHFSTRQNIQYNWPKLEDVP
                     DILAELATVQMHAIQTSGNCIRNITTDPLAGIAEDEIEDPRPYCEISRQWSTFHPEFS
                     WLPRKFKIAFTGAIHDRAAVPVHDIGIYLVKNPAGEVGFKVLVGGGQGRTPMIGVVIR
                     EFLEKRYLLSYLEAILRIYNLEGRRDNINKARIKILVKALGAEAFKCRVEEEWEQIKD
                     SSLLLDRHEIDRIAAFFAPPPYDPDAVRDTRFEQRLAQDKAFATWVKRNVVNHKVPGY
                     RAVYISLKAPTNPPGDATDSQMDAIANLADTYSFGQIRVLYEQNLLLADVKQADLYTL
                     WQALKCHDLATPNIGTLTDMICCPGLDYCSLANAGSIPIARQINERFNDLDYLYDLGE
                     IKIKMSGCMNACGHHHVGHIGILGVDKQGEEYYQITLGGSAENDAALGDRLGPAIAKA
                     EVADTLAKILDIYVERRFEDERFLDTYRRIGIETFKARVYGGDETAIEEEKVRAYAGH
                     "
BASE COUNT         1028 a         1288 c         1270 g         1013 t
ORIGIN      
        1 ggtaataccg cctgcgcaag ggcgagggta agcgtcagga tcagtgccaa gtggccgagc
       61 tcggggatca tggtctggcc ttggccgtgg ctaaggcccc ggcgacctcg ggcggcatat
      121 agttttcatc gtgcttggcc agcacctcgg tggcctcaaa ggtgtgatcc ggacgcatcc
      181 ggccgtgagc gataatgccc tggccttcgc ggaacagatc gggcaggatc ccagtataga
      241 ctacagtgac cgtatgggcc agatcggtca gatcaaaacg cacctcgaga ctttggggtt
      301 ttcttacgac accaccctcc acgaccaagc cccccagacg gatagggcta tcttggggcg
      361 cctcgcccgt gactatttgg gtcgggctgt agaagaacag caaattcttc cgaaatgcgg
      421 tcagagccaa ggcggctgcg gctgatatgc ccaccagcac caccatcact gccatcatgc
      481 gacgttggcg taaggtcatt gtttgagtct ctggccgagg cgtttcatca cccgtttatg
      541 ccaagcaagc gattgcccaa gtacacccaa gagcacgact gctgctagac cgtaagctgt
      601 ccatacgtaa aaggcataac cgcccataga aaagaaatcg cgcactgttg agatccaatc
      661 aataaaatca acccatcggt ttttaaggca gagcagtgtg ggtagcatct attaccccgc
      721 cgcccaggca aatttcacct ttatagaata ccactgactg gccagatgtg atagcgcgct
      781 ggggttgatc aaactcgacc cgagcgcgac ctcgatcgat agccgtgatg gtacaggttt
      841 gatcactctg gcgatagcgg gtcttagcca tacagcggaa cggtgtggca ggcggatcgc
      901 cacttaccca tgaaagctgg gttgttgcga gcgtgtggct gaataatagg ggatgatcgt
      961 gtccctgggt caccaccagg acattgtcaa ccacatcctt ggccacgaca taccagggtg
     1021 cttcagcggc gtctctcact ccaccgatcc ccaagccctc ccgctgaccc aaggtgtaat
     1081 agatgatccc cgggtgttcc ccgatagtct tgcctgcaag tgttcggatc gctcccggct
     1141 gcactggcag ataacgcgat aagaaggctc ggaacggccg ctcgccgatg aagcagatgc
     1201 ccgtgctgtc tttcttgtcg tacacggcca aaaccgctcg ttgcgccatg cgtcgtactt
     1261 cgatcttggt gaatccaccc accgggaata ggcttcgggc gagctgcgcc tgccccaggc
     1321 ggtggagaaa atagctttgg tccttgtttg gatcgctgcc ctttaacaaa aaaaagcgcc
     1381 cttcctgcgc ctggatgtgg gcatagtgcc cggtcgccat ccatgctgca cccgccgtga
     1441 gcgcatggtc aaggaaggct ttgaacttga tctcggcgtt acagagcaca tcaggattag
     1501 gcgtccgccc ggccttatac tcggccagga aatcgctgaa aacccgctct ttgtattccg
     1561 tggaaaagtt gacggcgtcg atatcgatgc cgatccgatc ggccaccgcc acagcatcga
     1621 tcagatcttg ccgggaggaa caatactcct cggtgtcatc gtcctcccag ttcttcatga
     1681 agagccccct gacctcatag ccttgctgtt tcaaaagcaa agcggagacc gcagaatcca
     1741 ctccacccga gaggccgaca atcacttggg tgttgggaaa tggggcaggt gctggcgccg
     1801 acatcagggg taaaaaggca gatgatagag cacatccagc ggatagcgtt ttccggccaa
     1861 gtagtcatcg acacagcgca gcaccagggg gctgcggtgc cggtattggg cattaaagat
     1921 ctcctcgcgc gatagccaga gggcgcgcgc aataccctga tccagcgggc gatccggctc
     1981 atgtttgagg gatatgcccc gaaagcacac acgaaggtat gcaatgtcgg tatagggttt
     2041 agcatacagg tagaggccaa cgagaccttc gggttcgatg tgccaggcgg tttcctcaag
     2101 tacttcacgc ttgaccgcct caaacagtgt ctcgccttgt tctagatggc cggcaggctg
     2161 gttgatcacg atcctgccct ccgcctcttc ctcgaccatg agaaagcggc catcacgctc
     2221 gatgatggcg gtcgcaacca cataaggtgt ccagtgcatc ctaataattt gaagaaaagg
     2281 tatggacgtt agaggaatta gcgtaaccga taaatcggcg gtgcgccatc ggccgctggc
     2341 tggtatttga ccgagaactc cgaaaatgcc ttcagcgcat cctcgatatc cttgccatcc
     2401 cggatctgaa aggaatcgat cccgcagcgg tgcataaaga acaggagatc ccggagcaca
     2461 tagcccactg cccgcagttc gcctttatag ccgtaacgct cgcgcaaaag gcgcgcatgg
     2521 gagaaacagc gcccgtctcc gagcttcggg aaatccaagg cgatgaggtc aaagtgcttt
     2581 agatcgtcgg cgatatctct aagtttatga tcgccgttga tgcaaacgcc cagtttaccc
     2641 gtgcgtttca gcaactgttc tcgctccacc tgccagcggc ccaaggagat gattacatca
     2701 cccgcgggca actcctcgtc cccagctatc tgctgccagc tatccgcgac gatcttctga
     2761 tccttaatga cctgcatagg cccgtacctt ctcttcttct atcgctgtct catcaccacc
     2821 atagacccgc gccttgaagg tttcgatccc gatccggcga taggtgtcga ggaaacgctc
     2881 gtcctcgaat cggcgttcga catagatatc caggatctta gccagcgtat cggccacctc
     2941 ggccttggcg atggccggac ccaggcggtc accgagcgcg gcatcgtttt ccgcggaccc
     3001 accgagtgtg atctgataat actcttcgcc ctgcttatcc accccgagga tgccgatgtg
     3061 tcccacatga tgatggccgc aggcattcat gcagccggac atcttgatct tgatctcgcc
     3121 gagatcgtag aggtagtcca gatcattgaa ccgctcgttg atctgccggg cgatggggat
     3181 agagccggca ttggcgagcg agcagtagtc gagtccggga cagcagatca tatccgtgag
     3241 cgtgccgata ttgggtgtag ccagatcatg gcattttaac gcctgccaca gggtatagag
     3301 atcggcctgc ttgacatcgg cgagcaagag attctgctca tagagcaccc ggatctggcc
     3361 gaagctgtac gtgtccgcca ggttggcgat ggcgtccatt tggctatcgg tcgcatcccc
     3421 aggcgggttg gtgggcgcct tgagcgagat atacaccgcg cgataccccg ggaccttatg
     3481 attgaccacg ttgcgcttga cccaggtggc aaaggcctta tcttgggcta agcgctgttc
     3541 gaaacgggta tcgcggactg cgtcaggatc atagggaggc ggtgcaaaga acgccgctat
     3601 ccgatcgatc tcgtgtcgat cgagcagcag ggaggagtcc ttgatctgtt cccattcctc
     3661 ctccaccctg cacttgaacg cctcggcccc gagcgctttg accaggatct tgatacgtgc
     3721 cttgttgata ttgtcgcgtc ggccttccaa gttgtagatc cgcaggatgg cctcaagata
     3781 agagagtaga tagcgcttct cgaggaactc ccggatcacg acgccgatca tcggggtacg
     3841 gccttgtcca cctccgacca agaccttaaa tcctacttct cccgccgggt tcttgaccag
     3901 atagataccg atgtcatgca cgggcaccgc cgcccggtca tggatggcgc cggtgaaggc
     3961 gatcttgaac tttcgaggga gccaggaaaa ttcgggatga aaggtcgacc attgacggct
     4021 gatctcgcaa tagggccggg gatcctcgat ctcatcctcg gcgatcccgg cgagaggatc
     4081 ggtggtaata ttgcggatgc agttcccgct tgtttggatc gcatgcatct gtactgtagc
     4141 aagttctgcc aggatatcgg gcacatcttc gagtttcggc cagttatact ggatgttttg
     4201 gcgggtggag aaatgaccga agcccttatc atagtcacgt gcgatatggg ccagcatccg
     4261 cagctgtttc gaggacagca agccgtaagg aatggctacg cgcagcatgg gtgcgtagcg
     4321 ttgaatataa agcccattgc gcaatctcaa ggggcggaat tcctcttctg tcaactctcc
     4381 cgccaagtat cggcgagtct ggtcgcggaa ctgcgctacc cgttcatcga cgatggtctg
     4441 atcgtagcga tcatagtggt acatgacttt tctccaagag atccagggct acctggccct
     4501 attcaggaat cactaaaaca ataaataata ttttattctt attattctta aaagaaatta
     4561 atgatgataa gtaaatattt ttatgttata aaaataggc
//
LOCUS       DASQSL010000994         2309 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_185325, whole genome shotgun sequence.
ACCESSION   DASQSL010000994 DASQSL010000000
VERSION     DASQSL010000994.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2309
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185325"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            117..1349
                     /locus_tag="VE844_10260"
     CDS             117..1349
                     /locus_tag="VE844_10260"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007870143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-[acyl-carrier-protein] synthase
                     family protein"
                     /protein_id="HZC01721.1"
                     /translation="MRRVAITGLGILSPVGNSPAGVFSNLMAGRSGVNRIAAAFSDRL
                     SVKIGAEVSFAPYEYFSHTKLRTLDRVSQFALVATSQALTDAAIALDREDPTRAGVSL
                     GTGMGGAATTEGGYVALYRENADRLQPYTVLMAMNNAAASWVALEHGLEGPSLTFSTA
                     CSSSAVAIGEAARQISCGEADIMLAGGTEAPLTYGTMKAWESLRTLAVEDADDASTSC
                     RPFSKDRTGFVLGEGAAILVLEEMDRALRRGAAIYGELIGYSLSTDSSHMTRPSAEGQ
                     IRAMRSALENAAISPDAIDYINAHGTATVQNDAVETAAIKQVFGSRAYHVPVSSTKSM
                     HGHLLGAAGAVEFLIAVLALKYQAIPPTANLRIPDPMCDLDYVPNEGRTAVNIRTVMS
                     NSFAFGGTSAVLIAQRSL"
     gene            complement(1344..2033)
                     /locus_tag="VE844_10265"
     CDS             complement(1344..2033)
                     /locus_tag="VE844_10265"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HZC01722.1"
                     /translation="MLRIVEPEWLDTMPADDPRAIRTRSDLVRINWVMQHRWIIQNTL
                     HRALTAPRRIVELGAGDGTLMLRLARTLAKYWDPVSVVLVDRQPAISKETVEAFSRLG
                     WEVTTVTADVFDWLDRPEAETCDAMLANLFLHHFKPPELATLLALAAPRAQHFLACEP
                     RRSRLALGLSHLVWLLGCGPVTYHDAVISVRAGFTGDELTALWPQNGWQLQERAIGPL
                     THFFYARRIAL"
BASE COUNT          511 a          645 c          679 g          474 t
ORIGIN      
        1 aacatccagg tatcgcgtga gccggtggag ctgaaaacga tgcaggatgt ggtggattat
       61 atcgatcgtc tgatcgccga acagcacggc aacgagaaac ggctggagat cagtgattga
      121 gaagggtcgc cattaccggg ctcgggatcc tctcgccggt agggaatagc cccgctggag
      181 tcttctccaa tctgatggcc gggcgatccg gggtcaaccg gatcgccgcc gccttttccg
      241 accggctatc ggtaaagatc ggggccgaag tctcgtttgc accttacgaa tatttttcgc
      301 acaccaagct ccgaaccctc gatagggtca gtcaattcgc gctcgtggct acctcccaag
      361 cgctcacaga tgcagccata gcccttgacc gagaagaccc aacgcgtgct ggtgtgtcct
      421 tagggacggg tatgggtggg gcggccacta cggaaggcgg ctatgtcgcc ttgtaccgag
      481 aaaatgccga tcggcttcaa ccttatacgg tgctcatggc gatgaacaac gctgccgctt
      541 cctgggtggc gctggagcat ggtcttgagg gacctagcct caccttctcc accgcctgct
      601 catcgtctgc tgttgccatc ggtgaggccg cccggcagat aagctgcggc gaggccgata
      661 tcatgctggc cggaggtact gaggcgcctt tgacctacgg tactatgaaa gcatgggaat
      721 cgctcagaac cttggccgtc gaggatgcgg acgacgcttc tacctcgtgc aggccgtttt
      781 caaaagaccg aaccggcttt gttctaggtg agggggcggc gatcctcgtg ctggaggaaa
      841 tggaccgggc tctaagacgc ggtgcggcta tttatggaga attgatcggc tacagcttga
      901 gcacggatag ctcgcatatg actcggccct ccgccgaagg gcagatccgg gcgatgagat
      961 cagcgcttga aaacgcggcc atctcgcccg atgcgatcga ttacatcaat gcacacggca
     1021 cggccacggt gcaaaatgat gcggtagaga cagcagcgat caagcaggtg tttggcagcc
     1081 gggcctacca cgttccagtc agttcgacca aatccatgca tggacacctg ctgggcgcgg
     1141 ccggtgccgt ggaattctta atagcggtgc tggcgctcaa gtaccaagcg attccgccga
     1201 cggccaatct acgtataccc gatcccatgt gtgatctgga ttacgtgccc aatgaaggca
     1261 ggacagcggt gaacatccga accgttatgt cgaactcttt tgcatttggt gggacgagtg
     1321 cagttctgat cgcgcaacga tcgttatagt gcaatacgcc gggcataaaa gaaatgggtg
     1381 agcggcccga tcgcacgctc ttgtaactgc catccgttct gaggccagag cgcggtaagc
     1441 tcatccccgg taaaacccgc gcgcacgctg atcaccgcat cgtggtaggt gacagggccg
     1501 caccccaaaa gccacaccag atggctcaag cccaatgcca atctcgagcg gcgcggttcg
     1561 caggcgagaa aatgctgagc acgcggcgcg gccagcgcga gcagggtggc aagctcgggt
     1621 ggcttaaagt ggtgcaaaaa cagattggcg agcatggcat cacaggtctc tgcctcaggg
     1681 cgatccagcc aatcgaatac atctgcggtc acggtggtga cctcccagcc gagacgactg
     1741 aatgcctcga cggtctcctt ggagatcgca ggctggcggt ctaccaacac cacgctcacc
     1801 ggatcccagt atttggccag cgtgcgggca agccgtaaca tgagcgttcc atcgccggcc
     1861 cccaactcga cgatacggcg gggggcagtc aacgcgcggt gcagggtgtt ttggatgatc
     1921 caccgatgct gcatcaccca attaatacgg actagatcgc tgcgggtccg aatggctcgg
     1981 ggatcatcag ctggcatcgt atccagccat tctggctcaa cgatacgcaa catgggcagt
     2041 atgctttctg cttagctaaa aatatagaaa attcaaagct atttttccgc tcttgagggc
     2101 ggtagtcaac tgggttcgca aggcatggag cagctgctcc aaatagactg tttcagttcg
     2161 gccacaagcc ttgtactaac tggctcatgg caacctcctg ctacttggct agcttcgata
     2221 aggctactgt agcagccaat tctgtgagcc agttacccta attgaataac ctagcgcttt
     2281 ggcgcgctaa taattgtttc ggatgcaca
//
LOCUS       DASQSL010000995         1070 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_185327, whole genome shotgun sequence.
ACCESSION   DASQSL010000995 DASQSL010000000
VERSION     DASQSL010000995.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185327"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="VE844_10270"
     CDS             <1..192
                     /locus_tag="VE844_10270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
                     /protein_id="HZC01723.1"
                     /translation="NGYGQPRRLVLTAGTITVRRLRLRGLDERFASRVLPLFQRRTRE
                     VGELLPQLYLHGLALGDCD"
     gene            557..802
                     /locus_tag="VE844_10275"
     CDS             557..802
                     /locus_tag="VE844_10275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01724.1"
                     /translation="MEVDIQDDQVILTEVKVTLVMSKSAFIDCLRKGKQWRQNLSPSS
                     LSGRLLGVLVNEGNAYWPRLLKRVVATMMTRLHVGMK"
BASE COUNT          223 a          313 c          316 g          218 t
ORIGIN      
        1 aacggatatg gtcaaccccg gcggttagtc ctgacggccg ggacgattac cgtgcgtcgg
       61 ctccgcctgc gggggctgga cgagcgcttt gccagtcggg tactgccctt gtttcaacgc
      121 cggacccgcg aggtaggtga gctgctgccc cagctctacc tgcatgggct ggcgctgggg
      181 gactgcgatt gagccctgcg gggcctgctg ggggatgccg ccctctggtc tccagcctcg
      241 ctgacccggc tgaaagcgca gtggcaacag gaggtcgccg cctgatccca tttccacact
      301 tattgacaag acctctgggg tcattggcac ttttggtgac atcggttaag gggtgaagtg
      361 aaccacctcc cgatgaggcc atgcacacga gtgactggat aaaaattgac tatctttgat
      421 ggaaacagcc ctaggaaagg gagcttagaa cacagactgc gactgatgcc atctgtgaga
      481 gataggacag ccagatggct ctcaccaaaa acgacgaaga gccacaaaat tctgacgcgg
      541 tttgagggag ggagccatgg aggtggatat ccaggatgac caggtgattc tcacggaggt
      601 caaagttacg ttggtgatga gcaagtcggc attcattgac tgcctacgta aaggtaaaca
      661 atggcgacag aacctctcac catcgtcact gagcggccgc cttctagggg tgctggttaa
      721 cgaaggcaat gcttattggc cccgcctgct gaaacgtgtt gttgccacca tgatgacccg
      781 ccttcacgtg ggtatgaagt agaatcagga cgccatacgt ggctcacacc acgcggtctt
      841 cctgaagccc ttcccaaacc ggacaagcac ctttcagcgc atccggctat cccccgatca
      901 cctgccccta cgggttggag cattcactga gagcgttatg accgcctagt gcggtccggg
      961 ctcagatctt agactccgtg atcggctgag gcccttcgcc ctgctgcggc gttacccgca
     1021 gccccggtgg gacgtcaccc ccacggctac tacggcctct ctgccccggt
//
LOCUS       DASQSL010000996         1512 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_76140, whole genome shotgun sequence.
ACCESSION   DASQSL010000996 DASQSL010000000
VERSION     DASQSL010000996.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76140"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            373..>1512
                     /locus_tag="VE844_10280"
     CDS             373..>1512
                     /locus_tag="VE844_10280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011711816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01725.1"
                     /translation="MAIMLTNTICWARFERAGLGRYSQGALSWMFRHAKLPWGELFQM
                     SVTVILRRQGIKRGLLVVDDTDKARSKTTRTIAHVHKLHDKASGGFIMGQNLVFLLLV
                     SELITVPVGFAFYEPDPVRTRWAKQDWALKKQGVAKRQRPPKPPRNPAYPTKLELGLR
                     LLGQFRQYHPTIRVRCVLADALYGSAAFVDTASAIFGGVQVISQLRSNQKVRFRNRTL
                     SVAQYFARTLGGAQQTSCAGTHIQRYRIRGGEPVTLRVSSARLYVDAQGKKRFVVALK
                     YEGETEYRYLVASDLTWRTEDIVQAFTLRWLVEVFFEDWKGYEGWSALTMQPDAEGSS
                     RSLILSLLVDQCLLLHPDQLAQLKHRQPAFTVGSLINRIKLESVLT"
BASE COUNT          294 a          433 c          449 g          336 t
ORIGIN      
        1 gtgacagaag gccaaactac gactcactac ttgcctgttc gtagtttgta aacgaattca
       61 ctcgattctc aagtttttag tgcttgacag atggcgtgaa gcagggtagc ggagtcagcc
      121 cgtcagactc tgcttcaagc gcctgcctga gccttcatcg tcccacgcac tggcccgcta
      181 ccgggaatta ttttagagta ttggccgtct tttgtatcgc ttgccatcgc cccggaggtt
      241 gccattttta tcagccagcc gctaccgttt gtccgtgcct ttgtagagga catcaatgcc
      301 gccattcagg agcacaaccc gttatcaccg ggcctgtcgg ccatccagcg gggatggctg
      361 agtttctccc tgatggcgat tatgctgacc aacacgatct gctgggcgcg gtttgagcgc
      421 gcgggcctcg ggcgctactc gcagggggcg ttgtcgtgga tgtttcgcca tgccaaactg
      481 ccctgggggg agctgtttca gatgagtgtg acggtgattc tgcgccgcca gggtatcaag
      541 agaggccttt tagtggtgga tgacaccgac aaggcccgct ccaaaaccac ccgcacgata
      601 gcccacgtgc ataagctaca cgacaaagcc agcggtggct ttatcatggg ccagaatctg
      661 gtgtttttgc tgctagtcag cgagctgatc acggtgccgg tcgggtttgc cttctatgag
      721 ccggacccgg tgcggacgcg ttgggccaag caagactggg cgttaaagaa gcaaggcgtg
      781 gccaaacgcc aacgcccacc taagccgccg cgcaatccgg cctacccgac caagcttgag
      841 ctgggcttgc gcttgctggg ccagttcagg cagtatcatc ccacgatcag ggtccggtgt
      901 gtgttggccg atgcgctgta tggcagcgcc gcctttgtgg ataccgcctc cgctatcttt
      961 ggcggcgtgc aagtcattag ccagttgcgc agcaaccaaa aggtgcgctt ccgcaaccgc
     1021 accctctcgg ttgcgcagta ctttgcccgc accctagggg gtgctcaaca gacatcctgt
     1081 gcagggacgc acatacagcg gtatcgcatt cgtggggggg agcccgtcac cctgcgtgtc
     1141 agcagcgccc gcctgtatgt cgatgcccag ggcaagaaac gctttgtcgt cgctcttaag
     1201 tatgagggcg aaacagagta tcgttatttg gtggcctccg atttaacctg gcgcaccgag
     1261 gatatcgtcc aagcctttac cttgcgatgg ctcgtcgagg tgttctttga ggactggaag
     1321 ggctatgaag gctggagcgc attgaccatg caaccggacg cggaggggtc aagccgaagc
     1381 ctgatcctga gcctgttggt tgaccagtgt ttgctcctgc atccggacca actggcccaa
     1441 ctgaagcacc ggcaacccgc gtttaccgta gggagcctga tcaatcgcat caagctcgag
     1501 agcgtgctga cg
//
LOCUS       DASQSL010000997         1005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_76142, whole genome shotgun sequence.
ACCESSION   DASQSL010000997 DASQSL010000000
VERSION     DASQSL010000997.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76142"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..601)
                     /locus_tag="VE844_10285"
     CDS             complement(<1..601)
                     /locus_tag="VE844_10285"
                     /inference="COORDINATES: protein motif:HMM:NF024776.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC01726.1"
                     /translation="MSKLEFSPEEVEALRYWRFHHPHPHVQRKMEIVYLRSQKLENNQ
                     IQHLCGIAKATFYRYLHEYQAGGVEKLKELNFHRPESQLVDHKRTLEEYFRAHPPATC
                     AEAAARIEELSGIKGGPTQTREFLKKLGMKPGKVGQIPAKADVKEQEGFKEEQLEPRL
                     AEAKAGQRLVFFMDAAHFVYAPFLALVWCFERLFGKAPSG"
     gene            623..>1005
                     /locus_tag="VE844_10290"
     CDS             623..>1005
                     /locus_tag="VE844_10290"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HZC01727.1"
                     /translation="MNSLLPFNFYPLPELLKSLILSHAKYNIASAAGLVPFPGRAAYN
                     ASKGGVVALTRALALDYAPNRIRVNAICPGLTETAMTRWRLDIPELRQQVLDATPWGR
                     VGQPADVAAAAVYLASDESDFMTGQL"
BASE COUNT          180 a          320 c          271 g          234 t
ORIGIN      
        1 gcccactggg ggctttccca aacagtcgct cgaagcacca gaccaaggcg agaaacggcg
       61 catagacaaa gtgcgcggcg tccataaaga agaccagccg ttggcccgct ttggcttccg
      121 ctaaccgggg ctcaagttgc tcttctttga atccctcttg ctctttgaca tcggctttgg
      181 ctggaatctg tcccaccttg cccggcttca tccccagctt ctttaaaaac tcccgcgtct
      241 gggtcggccc gcctttgatc ccgctcagct cttcaatcct ggccgccgct tcggcacaag
      301 tggcgggcgg atgcgcacga aaatactctt ccagcgtcct cttatggtcg actagctggc
      361 tttccgggcg gtgaaagttc aactccttga gcttctccac tccccccgct tgatattcgt
      421 gcaggtagcg atagaaagtg gctttggcga taccgcacaa gtgctggatt tggttgttct
      481 ccagcttctg gctccgcaag tagactattt ccatcttccg ttgcacgtgt ggatgcggat
      541 ggtggaaccg ccaatagcgc aacgcctcta cctcttctgg gctaaactct agcttggaca
      601 tttgagagcc tctgggtcga agttgaactc gttattgccg ttcaactttt accctttacc
      661 agagctcctc aaaagtctca tcttgtccca cgcgaagtat aacattgcct cggccgccgg
      721 cctcgtgcct tttccagggc gcgccgccta taacgcctcg aaaggcggcg tggtcgcgct
      781 gacacgcgcg ctggcgctgg actatgcgcc caaccgcatt cgggtcaacg cgatctgtcc
      841 cggtctgacc gagacggcga tgacacgctg gcggctagac atcccggagc tgcgccagca
      901 ggtgctcgac gcgacgccat ggggccgcgt cggtcagcca gcggatgttg ccgccgccgc
      961 ggtttacttg gcctcagatg agtccgactt catgaccggc cagct
//
LOCUS       DASQSL010000998         1002 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_88326, whole genome shotgun sequence.
ACCESSION   DASQSL010000998 DASQSL010000000
VERSION     DASQSL010000998.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88326"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1001)
                     /locus_tag="VE844_10295"
     CDS             complement(<1..1001)
                     /locus_tag="VE844_10295"
                     /inference="COORDINATES: protein motif:HMM:NF022825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3187 family protein"
                     /protein_id="HZC01728.1"
                     /translation="MPLLPADLRDIAAASTLSHPSSQGEEEHDQISGGPFPIRSLSPI
                     QLLFFQFVPEHALPVPRGAWQVRFDLVEANLLARDEHEDDFHFFDFELTRANLALQYG
                     AFERLALGVEIPLLYTWDGLLDNFIKGFEDITGFQRSIRFNRPQNRFTYVIEKDGRVA
                     VQGGSGALGIGDIALSAKALLRDEGTWAPAVAGRFALKLPTGDDERALGSGEVDVGLG
                     VVLEKSFGPTHFYLNLGLTIPTGQPFAGTGIDSIPMLSAFLTGEYRVTEHFSLLLQLN
                     GVTPPIRNTGLDIDNPTYEILAGFNWRLPGSPIVWQAGLMEDLNNTNRTADFALFTS"
BASE COUNT          218 a          273 c          322 g          189 t
ORIGIN      
        1 cagctcgtga acaaggcaaa atccgctgta cgattcgtgt tgttgaggtc ctccatgagg
       61 ccggcctgcc agacaatggg ggagccaggg aggcgccaat tgaagcccgc gaggatttcg
      121 taggtggggt tgtcgatgtc gagacctgtg ttgcggatcg gtggggtcac gccgttaagc
      181 tgtagcagca gcgagaaatg ctcggtcacg cggtattctc ccgtcaggaa ggctgagagc
      241 atgggaatgc tatcaatacc ggtgccggcg aacggttgcc cggtgggaat cgtcaacccg
      301 agattgagat agaagtgcgt cgggccaaag ctcttctcta gtaccacgcc gagcccgaca
      361 tccacctccc cactgcccaa agcccgctca tcgtcgccag taggcaactt cagggcaaag
      421 cgccctgcca ccgcaggcgc ccaggtgcct tcatcgcgga ggagggcttt ggcgctcaga
      481 gcgatatcac cgatgcccaa tgctccagag cccccctgca ctgccacccg tccatctttt
      541 tcgatgacgt aagtaaagcg gttctgcggg cggttaaagc gaatgctgcg ttggaagccg
      601 gtgatgtctt cgaagccttt gatgaaatta tccagcaagc catcccaggt gtagagcagc
      661 gggatttcga caccgagcgc cagccgttcg aacgcgccat attgcagcgc cagattggcc
      721 cgggtgagtt caaaatcgaa gaagtggaaa tcatcttcgt gctcatcacg ggccaggaga
      781 ttggcctcta ccaagtcgaa tcgtacctgc catgccccac ggggaactgg cagggcgtgc
      841 tctgggacga attgaaagaa gaggagctgg atgggggaaa gactgcggat gggaaagggg
      901 ccgccgctga tctggtcatg ctcctcttcg ccttgagagg agggatgcga cagagtgctg
      961 gcggcggcga tgtcgcgcag gtcagcgggc agcagaggca at
//
LOCUS       DASQSL010000999         1002 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_196132, whole genome shotgun sequence.
ACCESSION   DASQSL010000999 DASQSL010000000
VERSION     DASQSL010000999.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196132"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1002
                     /locus_tag="VE844_10300"
     rRNA            <1..>1002
                     /locus_tag="VE844_10300"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          247 a          238 c          340 g          177 t
ORIGIN      
        1 gaacgatgcg ccgcagtggg taagagcccc gtatgcgaaa ggtaaccagt ctcggatcgt
       61 catcccaagt aacgccggct tcgtgaaggc cggcgtgaat ttgcgaggac cacctcgtaa
      121 ggctaagtac acacaggcga ccgatagcga actagtaccg tgagggaaag gtgaaaagca
      181 ccccgggagg ggagtgaaat agtacctgaa accgttggtc tacaatcagt caaagcgtcg
      241 tcatggccct tcgggaccat ggccgcgatg gcgtgccttt tgaagaatga gccagcgagt
      301 taccgtgtgt ggcgaggtta acccgtgagg ggtagccgga gcgaaagcga gtctgaatag
      361 ggcgattcag tcgcatgcgg tagacccgaa gccgagtgat ctatccatgg gcaggctgaa
      421 gcgggggtaa gactccgtgg agggccgaac ccacctaggt tgaaaactgg ggggatgacc
      481 tgtggatagg ggtgaaaggc caagcaaact cggtgatagc tggttctccc cgaaatgcat
      541 ttaggtgcag cgttgggtgt tcagtcatgg aggtagagca ctggatgggt tagggggcct
      601 acaagcttac cgaccccagc caaactccga atgccatcgc tccacagccc ggcagtgaga
      661 ccatggggga tgagcttcat ggtcgaaagg gaaacagccc agaccgccga ctaaggcccc
      721 taattctgga ctaagtggta aacgatgtgg gattgcccag acagccagga ggttggctta
      781 gaagcagcca cccttgaaag agtgcgtaat agctcactgg tcgagtgatc ctgcgcggac
      841 aatgtaacgg ggctcaagtc cagagccgaa gtcgcggatc cacaccttcg ggtgtgggtg
      901 gtaggggagc gtcgtcctcg gagcgaagcg ccggtgtgaa ccgtcgtgga ccgtggacga
      961 gtgagaatgc tggcatgagt agcgagagag gggtgagaaa cc
//
LOCUS       DASQSL010001000         1515 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_76150, whole genome shotgun sequence.
ACCESSION   DASQSL010001000 DASQSL010000000
VERSION     DASQSL010001000.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76150"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(170..739)
                     /locus_tag="VE844_10305"
     CDS             complement(170..739)
                     /locus_tag="VE844_10305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01729.1"
                     /translation="MPAKRRRQPMDGVSVPQQETSLLTEEVWRGAEERLRAGTARREA
                     TKRRIETGQYQALDTPARLHARANRVLGDPIARQELREKGLELVESRGPDGDLNEFLL
                     ERIINGENFLGVNFFDLGKRAARCVGRIEIRTPDGRGGSGTGSMVSPRLLLTNHHVLQ
                     TAEWVCQSRVVFDPSHGSNALRCHICITP"
     gene            958..1116
                     /locus_tag="VE844_10310"
     CDS             958..1116
                     /locus_tag="VE844_10310"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01730.1"
                     /translation="MQRTITLRQQYRIRLPDALIAATALDCGLPLVTRNTQDFHTING
                     LILLNPFA"
BASE COUNT          326 a          423 c          424 g          342 t
ORIGIN      
        1 tgccagcgac ggctcgtacg agggccaaag tccatcacgg acagcgcctt cgcggtccgg
       61 cactggcggt ggcacgggtg gcggtggcac gggtggtggt ggcatgggtg gtggcacggg
      121 tggtggtggc acgggtgggt aagtgagagt gacctcaggg gcttatgctc taaggtgtga
      181 tacatatgtg acaccttaga gcattgcttc catgcgaggg atcgaagacg acgcggcttt
      241 gacacaccca ctcggccgtt tgcaggacat gatggttcgt gagcagcaac cgcggtgaga
      301 ccatggaccc ggtgcccgag ccgccgcggc catccggcgt gcgaatctcg atgcgaccga
      361 cgcaacgggc ggcacgcttg ccgagatcaa agaaattgac gccgaggaag ttttccccgt
      421 tgatgatgcg ctccagcagg aactcgttca ggtcaccatc ggggccgcgt gattcaacca
      481 gctccagccc cttctcccgc aactcctgcc gcgcgatcgg atctcctaag acgcggtttg
      541 cacgggcatg caggcgcgct ggcgtgtcaa gggcctggta ctgcccggtt tcgattctgc
      601 gctttgttgc ctcgcgtcgt gcggtgccag cccttaaccg ctcttcagcg ccgcgccaca
      661 cctcttcagt gagcagggac gtctcctgct ggggcacgga caccccatcc atcggttggc
      721 gtcgtctctt tgctggcaca tttcctcctc tcttgccctc gcgtccactc gtcacgtcta
      781 cagtgatcca agaaaataat cccgggagag ttttttccaa gtaattatag aactcaccta
      841 acctattgaa acatataagc ttatatcgtc agcatggttt atttgtgatc atctagtaaa
      901 atcaatacgt tagaagaatt tcaacgttac ttgggcaaaa ctctccacga gtccgtggtg
      961 cagcggacca tcacattgcg gcagcagtac cgcatccgtc tgccagacgc cttgatcgcg
     1021 gccaccgccc tcgattgtgg tctcccgctg gtcacccgga atacacagga tttccacacc
     1081 attaacggcc tgatcctcct caacccattt gcgtgaatgg tcggctgcct cagagcggga
     1141 gaggagtccg accgggaggc tactgaaccc tgcgctgttt ttcaacacta cgggacggtg
     1201 gcccaagttc gcacgattgg ttgccgccta cgaaagagag aaaaaggcat ttgtcttcgc
     1261 agttgtccac agacccgtag gagacaacta taggatatat atcggggatc tataggaact
     1321 acagggggag ctgagaccgc ttttattttg aaggatttcg agccgctatt gcatctaaat
     1381 atgcgaaaaa ctgcacctaa ttatgcgcga ccgttacaac cgattatgcg caacccgtgc
     1441 acctaattat gcgtggataa cttcggcaat tcatgatctg actgtaaaaa gctggttatt
     1501 caatagtggc gggta
//
LOCUS       DASQSL010001001         1029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_47757, whole genome shotgun sequence.
ACCESSION   DASQSL010001001 DASQSL010000000
VERSION     DASQSL010001001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47757"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            49..345
                     /locus_tag="VE844_10315"
                     /pseudo
     CDS             49..345
                     /locus_tag="VE844_10315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013953318.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GYD domain-containing protein"
     gene            712..>1029
                     /locus_tag="VE844_10320"
     CDS             712..>1029
                     /locus_tag="VE844_10320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01731.1"
                     /translation="MLSLVIVGFGLAEAVEAAGWVPTLVGLWTGFLFVHVAFRFFGWG
                     KFAANLLWGVGLAGAMAMLFAPGLLFGMTVSTLPTWAKVAYAATWGFLIGFGGPARAI
                     ARQR"
BASE COUNT          202 a          268 c          318 g          241 t
ORIGIN      
        1 atcggtgtca tcatggggtg agtaagagcg agggaaagga gaaggccgat gcccacttac
       61 gtctctctat taaacttcac cgaccaaggg atcaggaacg tcaaggatac cctcgaacgg
      121 gccgataggg ctgccgaact cgcttagcag aagtatggag cgaggttaga gcagatctac
      181 tggaccgtcg gtccctacga catcgtcctc atcatcgaag cgcccgatga cgagagtgcc
      241 accgccttac tgctagaggc cggctccatg gggaacatta ggagcaccac gctccgcgca
      301 tacaaccgtg aggagatgag gggaatcatc gagaggcttg gctaatccga gaaggattgc
      361 cgtttttcga acccgcgccg aattcgttca cctacaacat acgggtgtta tctaaaactc
      421 tgcccctgca tgttgagctt taaccgaacc cggcctacag cccgccgggt gaacttgtgc
      481 ccaaatcgcg cttgatgcct aagggtgtga tgtaggtaga ggctggttcg aagggacgta
      541 tgagcgcatg atgttacccg acggggccta caggtttgga caaaaatccc ccccaccaga
      601 cgtatccgca cctttaggcc cctctctcta ttacctggcc gggttagcgt gaggtttgtt
      661 cggtctttgc gggagtgggc caggcaagat cggacatgga ttattctcgc tttgttgtct
      721 cttgtcatcg tcggcttcgg cttggccgaa gccgtcgagg ccgctggctg ggtgccgacg
      781 ctggtcgggc tttggacggg cttcttgttt gtacatgtag cgttccgctt tttcggttgg
      841 gggaagttcg ccgcgaacct cctttggggg gtagggcttg ccggggccat ggcgatgtta
      901 tttgcgcccg gcttgttgtt tgggatgacg gtctctacgc tccctacgtg ggcgaaagtt
      961 gcctatgcgg cgacttgggg gtttctaatt ggctttggag gtcccgccag agcgatagcc
     1021 agacagcga
//
LOCUS       DASQSL010001002         1317 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_22319, whole genome shotgun sequence.
ACCESSION   DASQSL010001002 DASQSL010000000
VERSION     DASQSL010001002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22319"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..664)
                     /locus_tag="VE844_10325"
     rRNA            complement(<1..664)
                     /locus_tag="VE844_10325"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            complement(941..>1317)
                     /locus_tag="VE844_10330"
     rRNA            complement(941..>1317)
                     /locus_tag="VE844_10330"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          216 a          438 c          367 g          296 t
ORIGIN      
        1 aggctcattc ttcaaaaggc acgctgtcac ccctactaag gaggctccaa cggtttgtaa
       61 gcaaacggtt tcaggtacta tttcactccc ctcccggggt acttttcacc tttccctcac
      121 ggtacttgtc cgctatcggt caccagggag tacttagcct tggagggtgg tccccccaga
      181 ttcagtccgc gtttcacggg tgcggaccta ctcaggtacg ccatcgagag tccggtcggt
      241 ttcgtctacg ggacgattgc cctctgtggt gcgcggttcc acacgcttcg actatcggtc
      301 ggcttggtaa ctcccgccgg gatggcgaca tcccggacag gcgccctaca accccccgta
      361 cgcaacgcgt cgccgcttac acgtacggag tttgggctga tcccctttcg ctcgccacta
      421 ctcggggagt ctcggttgat ttcctttcct ccgggtactg agatgtttca gttccccggc
      481 ttgcctccgc atgcctatgt attcagcatg cggtaacgcc gtattaccag cgctgggttt
      541 ccccattcgg gaatccgcgg atcacaggct attcagcgcc ttcccgcggc ttttcgcagc
      601 cgttcacgcc cttcttcgac tcctggtgcc aaggcatcca ccatgtgccc ttcctatctt
      661 gacggtgatc gcgcacacgc gaaacggccc cgaatggagc cgtcgagcga gcacgcggtg
      721 atacccgttt gttggcaatg ctgtgcagtt ttcaaggtcc gcgcgaggcg cgcgccccgg
      781 actggggcgc tcggtctctc aaaactcaac agcatgcggt ccgcgagccg gagctcggga
      841 ccgccaggtc cggtcgacgt tcaggaagcc ggcgggcctc gagcgccgcg gtctgcggcg
      901 agcgggctcc ccggccgctc caatcctgga gcttccctag aaaggaggtg atccagccgc
      961 accttccggt acggctacct tgttacgact tcaccccagt cacgagcccc accttcgacg
     1021 gctccctccc ttgcgggtta ggccaccggc ttcgggtgtt gcttgcttcc atggtgtgac
     1081 gggcggtgtg tacaaggccc gggaacgtat tcaccgcggc aatgctgatc cgcgattact
     1141 agcaactccg ccttcatgca ggcgagtttc agcctgcaat ccgaaccgag acgcgctttg
     1201 agggattcgc tccacctcgc ggtatcgcag ccctctgtac gcgccaatgt agcacgtgtg
     1261 tagccctgga cataaggggc atgatgactt gacgtcatcc ccaccttcct ccggttt
//
LOCUS       DASQSL010001003         2475 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_185367, whole genome shotgun sequence.
ACCESSION   DASQSL010001003 DASQSL010000000
VERSION     DASQSL010001003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2475)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2475)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2475
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185367"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(135..617)
                     /locus_tag="VE844_10335"
     CDS             complement(135..617)
                     /locus_tag="VE844_10335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01732.1"
                     /translation="MDFNNDNLSINASEPRILHVDLSSCFATLEAQCSPLQRGKPLVV
                     AAYDSPGGCVVAPSIEAKQLGIIELRINNGYTQESGLSWKYETKWDFSTIGKKKTPGD
                     CDAGIRQKLSNRSQSLECFTELGSKMGPVLPPRRSSQIKSQALLSNSVAKISNSQKLL
                     "
     gene            687..1112
                     /locus_tag="VE844_10340"
     CDS             687..1112
                     /locus_tag="VE844_10340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018988328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01733.1"
                     /translation="MAEKAALMADTSVSTAPEPNLVTVTHVVYGLHALSLLIGVTTAA
                     TIVGAFVFGVPSIIAVVINYLKRREARGTFLESHFRWQIRTFWFALLWCMVGGVLFLT
                     FVGIPLAVGVFFGTGVWAIYRIARGWLALRDRKPMYTNS"
     gene            complement(1216..1701)
                     /locus_tag="VE844_10345"
     CDS             complement(1216..1701)
                     /locus_tag="VE844_10345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014578081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01734.1"
                     /translation="MIEEWPAALEATPLATALRGSVWVYPLVNAAHILGVALLVGSIV
                     PLDLRLLGVWRSVPLTPLWGVLTRTAGAGLILAMIFGALLFITRASEYTASNLFISKM
                     AVVALGTANALALRVLPQTQVSEITSTKGKPPACLRLAGGISLVTWLTALTLGRLIGY
                     F"
     gene            complement(1719..2102)
                     /locus_tag="VE844_10350"
     CDS             complement(1719..2102)
                     /locus_tag="VE844_10350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019019739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HZC01735.1"
                     /translation="MDSVAKRVRLALLALLTGVFLAQAAWAHHGWGWASEEEFELTGE
                     ITAVRLGNPHGEVTLDVKGEKWIVEVGQPWRNERAGLTAKMLSKGQVITAHGHRSATK
                     GKRLMKAERVVIDGKSYNLYPDRKS"
BASE COUNT          556 a          695 c          648 g          576 t
ORIGIN      
        1 gatgggcaac tttaacgccc gtacggtctg gtaagccatc cgctgtcgat tcccaacaaa
       61 atattgagct tcgcataaat aatggatata gcagcatttc accgccacgg taagtcagag
      121 gcatagatgc aagatcacaa aagtttttgt gagttactaa tcttagcaac cgaattagaa
      181 agcagggctt ggcttttaat ctggctcgac cttcttggcg gtaagactgg acccatctta
      241 ctaccgagct cagtgaagca ctcaagcgat tggctacggt ttgataactt ttgccggatt
      301 ccagcatcgc aatcgcctgg agtcttcttt tttccaattg ttgagaagtc ccatttggtc
      361 tcatacttcc atgatagccc gctttcttgg gtatatccat tatttatgcg aagctcaata
      421 atgccaagtt gcttggcctc gatagatggc gccactacac atccacctgg ggaatcataa
      481 gcagcaacca ctaagggctt gcctctctgc agcggactac attgagcctc aagtgttgca
      541 aaacaagagc taaggtctac atgcaaaatt ctcggctctg atgcattaat tgataaattg
      601 tcattgttaa aatccatcag atacctcctc taggcgacca atggacttga taggacaggt
      661 tacagcaatc aggatgtcac cgcgatttgg ctgagaaagc agcgctcatg gccgacactt
      721 cggtttccac cgccccagaa ccgaaccttg tcacggttac acacgtcgtg tatggcttgc
      781 acgctctaag ccttctgatc ggcgtcacga ccgccgcgac cattgtcggt gccttcgtct
      841 ttggcgtgcc ctcgatcatt gccgtcgtga tcaattatct gaagcggcga gaggcaagag
      901 ggaccttcct ggagtcgcat tttcgctggc aaatccggac cttctggttt gcactcctct
      961 ggtgcatggt cggcggggtg ctgttcctta ccttcgtggg tatcccgctt gcggtcggtg
     1021 ttttcttcgg gacaggcgtg tgggctatct atcggatcgc tcgcgggtgg ctggcgctgc
     1081 gagatcgaaa gccgatgtat acaaacagtt gattccggat gcggtcctta attccttgac
     1141 ggtgcattga ctgacctgac ccgagccccc gaacgacagc ttccttcgcg gcggcatcaa
     1201 caaagactga ctgcttcaaa agtagccgat cagacgtccc aacgtcaggg cggtaagcca
     1261 cgtaacgagc gatatgccac cagcgagccg caggcacgcc ggcggctttc cctttgtcga
     1321 cgttatttcc gaaacttgcg tttgcggtag cacacgcaac gccagagcgt ttgccgtccc
     1381 taaggcaacg actgccattt tggagataaa gaggttcgag gcggtatatt cgctggcgcg
     1441 ggtgatgaac aggagcgctc caaaaatcat cgccagtata agaccggcgc cggcagtgcg
     1501 tgttaggact ccccagagcg gcgtcaacgg caccgaacgc cacaccccaa ggagacggag
     1561 atccagtggc acaatagatc cgacgagaag cgccacgcca aggatatgtg cggcattgac
     1621 cagcggataa acccaaaccg agccgcgcag cgccgtcgcg agcggcgtgg cttccagcgc
     1681 tgcgggccat tcctcgatca tctggcgccg ccggctactc aggacttacg gtcaggatag
     1741 agattgtagc tcttgccatc gatgaccacg cgctcggctt tcatcaaccg cttccctttc
     1801 gtggcggaac gatggccatg ggcggtgatg acttgtccct tgctaagcat cttcgccgtg
     1861 agtccggcgc gttcgttccg ccacggctgc cccacttcga caatccactt ctcccctttt
     1921 acgtccagcg tcacctcgcc gtgggggttt cccagccgta cggccgtgat ctcgccggta
     1981 agctcgaatt cctcctcgct tgcccagccc cagccgtggt gcgcccaggc ggcttgcgcc
     2041 aagaaaactc ccgtgagcag cgccaacagc gccagtcgta ctcgttttgc tactgaatcc
     2101 atcgccaatc ctccagatcg aagtttagtt tcatattaaa gccttagatc gctaagtgct
     2161 acgccaggcg aatcgaaagc gcagtttgtt gtcgcacaac aaacacgagg ggcgttacgg
     2221 tgccgttgcc gccgctactt aaggacagtg ttccatggcc ggttcgccgg gtggagggca
     2281 ttacatctta tttgcgttga ccgtgatcag tccatgtcaa gcgaagcacc cggaggagag
     2341 tgaggacgac taaaccccgt atattggctc agtgggcaag ccggcaccct caaatccggc
     2401 taggcgcaga tgaagaaaag ggaaactggt ggctctttta agaatactat aagcacttga
     2461 aaaaactact ttttt
//
LOCUS       DASQSL010001004         1053 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_113573, whole genome shotgun sequence.
ACCESSION   DASQSL010001004 DASQSL010000000
VERSION     DASQSL010001004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113573"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..992
                     /locus_tag="VE844_10355"
     CDS             <1..992
                     /locus_tag="VE844_10355"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZC01736.1"
                     /translation="SIAFERVENHWRGEKPDFPELEIRLAREDSTRLALLVTGEAHAG
                     DLPRELQDDALRRGMKIVSSSLPSEWLSAYFGGQFHLPGDPKFKADVPWNDKRVRQAM
                     NMAINRGELLNNLFKEKGNPMYVSGFQPYLEGWNPEWAKRFDQLYGYNPTKAKELLKA
                     AGYPPGRIQVKILSYTSPGEAELPQVAEAMALYFNEVGIQATLEPVDEAKAVSMWRAK
                     ETACCVWPNIIGLRPTEEWLRTSYYSKGASPLFLDEYIEKKYLELTTLVDPKERERVA
                     REIGDHLFEEFADFPFLSIFNEVVVNPKVVADWTYPGPGAGRSTHFHLLKAAK"
BASE COUNT          244 a          289 c          320 g          200 t
ORIGIN      
        1 gctcaatcgc cttcgaacgg gtggaaaacc attggcgtgg ggaaaaacca gatttccccg
       61 agctggagat ccgcctggcc cgtgaagatt cgactcgcct ggccttattg gtcaccgggg
      121 aggcgcatgc cggggatcta ccccgcgagc ttcaggatga cgccctgcga cgaggtatga
      181 agatcgtctc ctcttccctg ccatcggagt ggctgtcggc ctatttcggc gggcagttcc
      241 acctgccagg ggacccgaag ttcaaagccg atgtgccgtg gaacgacaag cgggtcaggc
      301 aagccatgaa catggccatc aaccggggtg aattgctgaa taacctattt aaagaaaaag
      361 ggaaccccat gtacgtcagc ggctttcagc cctatctgga gggctggaac cccgagtggg
      421 ctaagcgctt tgaccagctc tatggctata accccaccaa agcgaaggaa cttttgaaag
      481 cggccggcta ccctcctggc agaatacagg tgaagatcct ctcctatacc agccctggcg
      541 aagcggagct tccccaggtg gccgaggcta tggcattgta cttcaatgaa gtgggcattc
      601 aggcgacgct agagcctgtg gacgaagcca aagccgtcag tatgtggagg gcgaaggaaa
      661 cggcctgctg cgtctggcct aacatcatcg gcttgagacc gacggaggag tggctccgca
      721 ccagctacta cagtaaaggg gccagccctc tattcctgga cgagtacatc gagaagaagt
      781 atctggagct caccacactc gtggacccca aagaacgcga gcgtgtggct agagagatcg
      841 gcgaccacct gttcgaagaa ttcgccgact tccccttcct gtcgatcttc aacgaagtgg
      901 tagtgaatcc caaggtggtg gccgactgga cctacccggg tccgggggct gggaggtcga
      961 cgcattttca tctcttgaag gcggcgaagt gaggatagga ctgagcaatg gggactgggg
     1021 actgagtgaa agggacctct cagtcctcag cac
//
LOCUS       DASQSL010001005         1452 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_102890, whole genome shotgun sequence.
ACCESSION   DASQSL010001005 DASQSL010000000
VERSION     DASQSL010001005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1452
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102890"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..825
                     /gene="sppA"
                     /locus_tag="VE844_10360"
     CDS             <1..825
                     /gene="sppA"
                     /locus_tag="VE844_10360"
                     /inference="COORDINATES: protein motif:HMM:TIGR00706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HZC01737.1"
                     /translation="LLITAVLTGEEGSAESGGKIGVVVLDGVISSELSEQTVRQLEKH
                     RDDPAIKAIILRVDSPGGGVASSQEIYEEVKRLRAGGKLVVASLGSVAASGGYYVACV
                     TDRIFANAGTLTGSIGVIVQLANAEELLRKVGVEPTVITSGPFKDSGNPTRPLRPEER
                     QVFQALVDDVYQQFVEAVSQGRQMSLEETRRLADGRIYTGRQAKELRLIDELGTFQDA
                     ITYTATAVGISGKPTLVQEEKERLWWLKFVLDRFPDTSLFRSLSHVDAVLQYRWLY"
     gene            867..1142
                     /locus_tag="VE844_10365"
     CDS             867..1142
                     /locus_tag="VE844_10365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018129815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HZC01738.1"
                     /translation="MTKADLVERVSERIKLTKKQTELIVNTLFTSVTDALTQGDKVEL
                     RGFGSFRVRQRHSRDGRNPKTGQGVHIPPKKVPFFKAGKELREMVDN"
BASE COUNT          332 a          362 c          431 g          327 t
ORIGIN      
        1 cttctgatca ctgccgtgct gaccggggaa gaagggagcg cggagagtgg tgggaagatc
       61 ggggttgtgg tgcttgatgg ggttatctca agcgaactgt ccgaacagac ggtgcggcag
      121 ctagagaagc atagggatga ccctgccatc aaagccatta ttctcagggt tgacagcccc
      181 ggcgggggag tagcctcgtc acaggaaatc tatgaggaag tcaaacgcct gcgggcgggc
      241 gggaaactcg tcgtggcatc cctcgggagc gtcgcggcat cgggtggcta ttatgtcgcc
      301 tgcgtcacag atcgcatctt tgccaatgct gggactctga cgggaagcat cggcgttatt
      361 gtccagctgg cgaatgctga ggaactgttg cgtaaggttg gcgtcgaacc gacggtgatt
      421 acgagcggtc cgttcaagga cagtggcaac ccaactcgcc cactgcgtcc tgaggaacgg
      481 caagtgtttc aggcgttagt cgatgacgtg taccaacagt tcgtcgaggc ggtttcacaa
      541 gggcgtcaga tgtcgcttga agaaacgcgt cggctagccg atgggcgtat ttacaccggc
      601 cgccaggcga aagagttgcg gctaatcgat gagcttggga ccttccaaga tgcgatcacg
      661 tatacagcca cggccgtcgg gatcagcggc aaacccactc tggtacagga agaaaaagag
      721 cgactctggt ggttgaaatt tgtgctcgat cgattccccg atacatctct gtttcgctca
      781 ctctcgcacg ttgacgctgt gctgcaatat cgttggttat attgacagct cagttcgcgc
      841 gccccaaccg aagaggagta gaggcgatga caaaggctga tctggttgaa cgtgtctcag
      901 agcggataaa actcacgaag aagcagaccg aattgattgt gaataccctc tttaccagtg
      961 tcaccgatgc tctgacacag ggagataaag tggaattgcg tgggtttggc agttttcgcg
     1021 tacggcaacg ccactcacgg gatggtcgca atcccaaaac aggacagggc gtgcatattc
     1081 cccccaagaa ggttcccttc tttaaagccg gtaaagaact gcgcgagatg gttgacaatt
     1141 aagttcgagg catgaaccgc atctcgtctg agatgtctat tacctacacg cattgaatgg
     1201 tggcagttac ctcttgaatc agctcgcccc ttcttcccct gttgcatcgt tgccaccgac
     1261 ggtgaacggt gctgaccacg ctcagcagtt ggttacacat gcctaatgcg cgaacctagt
     1321 gacggaaatc ttcgcaaata caatgattcg cgggtaggct gggtgtggtt gttctgcagc
     1381 gcatttcccc cacgggattt agcaagtgtc acaacttctg cgcggcagtt ctctggtttt
     1441 caacgggatt ga
//
LOCUS       DASQSL010001006         1674 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_76180, whole genome shotgun sequence.
ACCESSION   DASQSL010001006 DASQSL010000000
VERSION     DASQSL010001006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1674
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76180"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1647
                     /locus_tag="VE844_10370"
     CDS             <1..1647
                     /locus_tag="VE844_10370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015207665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01739.1"
                     /translation="LGNRKTPPQQVDRRQFEVCVFSQVMWELKSGDLCIEGSDHFTDY
                     RTQLISWEDYHRTVEEYGEQVGLPVNSRAFVAETRRWLEEIAAATDASFPGNKSVRFE
                     NGELILSRLPARPIPKPLKALDWLIAERLEPINILDVLADTERWLNWTRFFGPLSGYE
                     SRVDDPRPRYVTTAFCYGCNMGPTQTARSLNGLGLDRRQIAWIHQRHITEDNLQEAIT
                     AVINAYNRFILPKRWGSGKSASVDGTKWDLYEQNLLAERHIRYGGYGGIGYYHVSDTY
                     IALFSHFIPCGVWEAIYILDGLINNKSDIQPEVIHGDTQAQSTAVYGLAHLLGIKLMP
                     RIRNWKELTLFRPSKTSRYQHIDALFSDTIDWPLIETHLPDMLRVVLSIKAGRITAST
                     LLRKLGAYSKKNKLYQTMRELGRVIRTAFLLHYLSDPELRRTIHAATTKSEAFNQFAK
                     WLAFGGDGTLLAENDREKQRKLIKYNHLVANCLIFHNVYSLTRILYQAVLEGKTFDDE
                     TLARLSPYLTEHVNRFGDYYLNLDRTTPAPDYNLGVLAVN"
BASE COUNT          384 a          482 c          449 g          359 t
ORIGIN      
        1 ctgggcaacc gtaaaacgcc ccctcaacag gtggatcggc gccagttcga ggtctgcgtg
       61 ttttcccaag tgatgtggga gctcaagtcg ggggatctgt gtatcgaggg cagcgatcac
      121 ttcactgact accgcactca actgatttcc tgggaagact atcaccgcac ggtggaggag
      181 tatggcgagc aggtcgggtt gccggtcaac agccgcgcgt tcgttgccga gacgcgccgc
      241 tggctggaag aaatcgccgc ggccacggac gcgtcttttc ccggcaataa atcggtgcga
      301 ttcgaaaacg gcgagctgat cctcagccgt ttacccgcca ggcccatacc caaaccgctt
      361 aaagccctgg attggttgat tgccgaacgg ctagagccga tcaacattct tgacgtgttg
      421 gccgacaccg agcgctggtt gaactggacg cggttctttg gaccgctgtc aggttatgaa
      481 tcacgcgtcg atgatccgcg cccgcgctac gtcaccaccg ccttctgcta tggctgtaat
      541 atggggccga cacaaaccgc gcgctccctg aacggactgg gcttggaccg gcgccagatc
      601 gcctggatcc accaacgcca tatcaccgaa gacaacctgc aggaagcgat caccgccgtc
      661 atcaacgcct ataatcgctt catcctcccg aaacggtggg gctccggtaa aagcgcctcc
      721 gttgacggta cgaagtggga cctgtatgaa caaaacctat tggcagaacg ccatatccgc
      781 tacggcggct acggcggtat cggttattac cacgtctccg atacctacat cgcgctgttt
      841 agccacttta tcccctgcgg ggtatgggaa gccatttata tcctggacgg cctaatcaat
      901 aacaaatccg atatccagcc cgaggtcatc catggcgata cgcaagccca gagcactgcg
      961 gtgtatgggc ttgcccacct tttagggatt aaactgatgc cgcggattcg caactggaaa
     1021 gaattgacac tgttccggcc cagcaaaacg agccgttacc agcacatcga cgcgctgttt
     1081 tccgatacca tcgactggcc gctcatcgaa actcatctgc ctgatatgct acgcgtggtg
     1141 ttgtcgatca aagccggccg catcaccgcg tcgacgctgc tgcgcaagct gggcgcttat
     1201 agcaagaaaa ataagcttta ccagaccatg agggaattag gaagggtaat tcgcacggcc
     1261 tttttgctgc actacctgag cgatcctgag ctgcgtcgca ccattcacgc ggcgacgacc
     1321 aaaagcgagg ccttcaatca gttcgcaaaa tggctggcgt ttggtggtga cggcacactg
     1381 ctcgccgaga acgatcggga gaagcaacgc aaactcatca agtacaacca tctggttgcc
     1441 aactgtttga tctttcataa cgtgtattcg ctgacccgca ttctgtatca ggcggtgctt
     1501 gagggtaaga cctttgatga tgagacgtta gcccgcctga gtccttatct caccgagcat
     1561 gtcaatcgct ttggcgatta ttatctaaac ctggatcgca ccacgccggc gccagactac
     1621 aatctcggtg tgctggcggt gaattagtga ttcaaaagag tcaaatggcc caat
//
LOCUS       DASQSL010001007         1691 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_129079, whole genome shotgun sequence.
ACCESSION   DASQSL010001007 DASQSL010000000
VERSION     DASQSL010001007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1691
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129079"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(210..1556)
                     /locus_tag="VE844_10375"
     CDS             complement(210..1556)
                     /locus_tag="VE844_10375"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01740.1"
                     /translation="MIVPIVAIPPSIEIGLAPYRDLFPRIETYQHIKEYCTGLVVLEK
                     PSINRLAACLVEGPAQSSINKALTQSPWSEEMVNQRRLEGIQPYHRGQGLRIGIIDST
                     FSHHPRGEKKIYGVYRYWDYVNGCYTYAIQWVTAAIATGGRCDGFDYRIYHRFHQEQE
                     LAYLQATRPSPEEGDRQPWLRRLIELLAYDVHRRQHKTKPQLGAELVEQMGASAMAPE
                     VYTVDSALFAPVVIEAIERQGRPWLADSEKTRLVFWQGQTFNCETFAQSRPDEAYRPV
                     TLKRHGQEKTYWVFTCVVRIKKYGKVRLAVIYDNPDRQGKPIYCFTRQLTWNTTKIVQ
                     VRCHRWDIEPLHEQIKQFLGAEDSQLQTEAGVRRHLTLVFVVNSLLKSLDLSQPIGDL
                     PMTELQDVSPTFGQRCRRILLEVFYELIQTIHRWLEQGQMTPTQIFETLFKRLLYV"
BASE COUNT          370 a          509 c          420 g          392 t
ORIGIN      
        1 gggtgaaagt gtctaattgt tatcattcgc caccctccac tgaggagaaa aatgtgctat
       61 tttgctaacc tcctaaatca gaccacagca gattgggaca ctcttgccct caccgctcat
      121 agggacgcat agctggccgc cctacgatgg caggttccac cgtgtcttgg atttcgcttc
      181 cacacacgac tttttcactt agcgacccat caaacgtaaa gtaaccgttt gaagagtgtt
      241 tcaaagattt gggttggggt catctgtccc tgctctaacc agcggtgaat ggtctgaatc
      301 aactcataga acacctccaa caggatgcgg cgacagcgtt gaccaaacgt gggcgacacg
      361 tcttggagct cggtcattgg cagatccccg atgggttgac tcagatccag ggatttcaga
      421 agtgaattca ccacaaacac cagcgtcagg tgccgccgga cgcccgcttc ggtttgtagt
      481 tgactgtctt cagctcccag gaactgtttg atctgctcat gcaacggttc gatatcccaa
      541 cgatgacagc gcacctggac gatcttcgtg gtattccagg tcaactgccg ggtgaaacaa
      601 tagatcggtt tgccctgccg gtccgggttg tcatagatga ccgccagccg gaccttgccg
      661 tatttcttga tgcgtacgac acaggtaaac acccagtagg tcttctcctg gccgtggcgc
      721 ttgagcgtca ctgggcgata ggcttcgtcg ggccgagact gggcgaaggt ttcacagttg
      781 aaggtttgcc cttgccaaaa caccaaccgg gtcttctcac tatcggccag ccacggtctg
      841 ccctgccgct cgatcgcctc aatcacgacc ggggcaaaca atgcgctatc gacggtgtag
      901 acctccgggg ccattgccga ggcgcccatc tgctcaacca attctgctcc caattggggc
      961 ttggtcttat gttgccgccg gtgcacatca taggcgagca actcaatcaa ccggcgcagc
     1021 catggctggc ggtctccttc ctccggagac ggccgcgtag cctgcaaata ggccaactct
     1081 tgctcctgat gaaagcgatg gtagatccgg taatcaaacc catcacagcg accccccgtg
     1141 gcgatggcag ccgtcaccca ttggatcgca taggtgtaac agccgttgac gtaatcccag
     1201 taccgataaa ctccatagat cttcttctct ccccgaggat gatgactgaa cgtgctatcg
     1261 ataatcccga tcctcagtcc ttgcccccgg tgatagggct ggatcccctc caaccgccgc
     1321 tgattgacca tctcctccga ccaaggcgac tgcgtcagcg ccttgttgat cgagctttgg
     1381 gctgggccct ccactaaaca cgccgccagt cgattgatgc tcggcttctc caacaccacc
     1441 agcccagtgc agtattcctt gatgtgttgg taggtttcta tccggggaaa caaatctcgg
     1501 tatggggcca acccgatctc gatactgggt gggatcgcta cgatgggcac aatcatctcc
     1561 ttcctctccg tctctcactg gaatcgaacc cccatcatag gcactcacgg ctatctttcg
     1621 ctagcccagt tcacacttaa gtgaaaaagt cgtggccaac tcatggaaca ccggccctaa
     1681 gaatttccta a
//
LOCUS       DASQSL010001008         1459 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_129086, whole genome shotgun sequence.
ACCESSION   DASQSL010001008 DASQSL010000000
VERSION     DASQSL010001008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1459
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129086"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..322)
                     /locus_tag="VE844_10380"
     CDS             complement(<1..322)
                     /locus_tag="VE844_10380"
                     /inference="COORDINATES: protein motif:HMM:NF025050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZC01741.1"
                     /translation="MFDKIQHMGYLVDDLDKAVTWFKNGFGAEHAGGGPVRSSRAVPS
                     GGRNAFVHFGQVEAELIEPGDASTLPKDTLVLHHLGYAVADIPKAVEWAQARGFAFVA
                     NAPFT"
     gene            complement(554..1299)
                     /locus_tag="VE844_10385"
                     /pseudo
     CDS             complement(554..1299)
                     /locus_tag="VE844_10385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_075985013.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
BASE COUNT          308 a          429 c          403 g          319 t
ORIGIN      
        1 tggtgaaagg cgcgttcgcg acgaacgcga agcccctagc ctgcgcccac tcgactgcct
       61 tggggatatc cgccacggca taacccaagt ggtgcaggac cagcgtgtct ttgggtaagg
      121 tgctggcgtc gccgggctcg ataagctccg cctccacctg accgaagtgc acgaaggcat
      181 tgcgcccgcc gctgggcacg gcgcgactgc tccgcaccgg gcccccaccg gcgtgctcgg
      241 ccccgaaccc gttcttgaac catgtgacgg ccttgtccag atcgtctacc aggtagccca
      301 tgtgctgaat cttgtcaaac atgtgttgtc ccttcgcgtg ttcagcattc agatatctat
      361 atgcgccgta tgcgccgtgc gacgctggcg ctcaatcgac gacaaccatg tggggtcctg
      421 tcattttgag gatggtgata gaccgcacgc taacccgtag aggccgtgca acagcccttt
      481 tggccaaacg ccccaggatc cgacgctgag ggatccggcg tggggtcgtg tttcagatct
      541 gtacttacta acctcaaacc atcaccccaa actcatagca attgacaaac aatccgatga
      601 cgatgtcatg catctgaatc gatttggaaa agcagatcgt cttgcgggtg agccgcttga
      661 tacgggtccg caaggtcaga cgcttgcgct cgatcttctg ggtgtttcgc ttgccaggag
      721 tgtgctcggc ggcatcgaga tgatgggtat aggcccccca ataatccgtg tgatagcgcg
      781 taaccccaaa gggctccagc agcgctttca acttcaagaa cacttcgtct ttgcgccggc
      841 caaagacata ggccaacact cgaccgctcc agtgatcaat ggcatgccac agccaccgcg
      901 gctcgtgttt cttgcccaca aaggaccaca tttcatcgac ttccgcttcg tccacgcgcc
      961 ggataatgat ctccatgtcc ccggaggaca aggcgttgag ccagggttcg ttgacactga
     1021 ctagcgcaga tgcttttttt tcaactcgtg aatgaccgtg gtcgggctga tcttcaacac
     1081 tcgggccgtg tcccggatgc cactgccatt gaggcgcatg tcaatgatgc gctgcttgat
     1141 ttcgggtaag cgccctttgt aggcggggtc gagcagaaat gactgatgaa cacagcccgg
     1201 attgtggcag cgataccgtt gcttcccggt gtcggtctta ccgcctttga ttacctgctt
     1261 gctctgacag tagggacatt gtacaggaat gagtgccata gacccccctt tcaagaaacg
     1321 gagggcagca tggcatacat tcgagtgaaa gtacagatct gaaacatgac ccacgcagta
     1381 atcaagcgtg gcttgcgacg caggcgcttg atggcgagac cacgttcact ccgaaggtgc
     1441 tcgaggttcc gacaccatc
//
LOCUS       DASQSL010001009         2251 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_8320, whole genome shotgun sequence.
ACCESSION   DASQSL010001009 DASQSL010000000
VERSION     DASQSL010001009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2251
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8320"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..466)
                     /locus_tag="VE844_10390"
     CDS             complement(<1..466)
                     /locus_tag="VE844_10390"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020557950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0006555 - methionine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HZC01742.1"
                     /translation="MGRLQTTRDRLAPLKPDYFSVTFGAGGSSREKTFETVLEIRERT
                     GIPVAPHISCIGCSIQTIRDVLNAYKEAGINRIVALRGDLPSGLASYGELRYANELVA
                     FIRRETGDYFHIEVAAYPEFHPQAPSAKSDLDNFKCKVDAGANSAITQYFYNA"
     gene            complement(607..1920)
                     /gene="ahcY"
                     /locus_tag="VE844_10395"
     CDS             complement(607..1920)
                     /gene="ahcY"
                     /locus_tag="VE844_10395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013219512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004013 - adenosylhomocysteinase activity
                     [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HZC01743.1"
                     /translation="MSIEPIKSIKADHKVADIKLADWGRKEIAIAETEMPGLMALREE
                     YASTKPLAGARIAGCLHMTIQTAVLIETLIALGAEVRWSSCNIFSTQDHAAAAIAAGG
                     VPVFAWKEETEEEFWWCIEQTIFGPEGWRPTMILDDGGDLTKIMHEQYAELLKDVRGL
                     SEETTTGVHRLYEMVKAGTLRVPAFNVNDSVTKSKFDNLYGCRESLMDGIKRATDVMI
                     AGKIAVIAGYGDVGKGCAQALRGLGASVWIGEIDPICALQAAMEGYRVVTLDEAAPLA
                     DLFITATGNIQVITHAHMKLMKNQAIVCNIGHFDAEIDVASLRQYRWENIKPQVDHVI
                     FPDGKRIILLAEGRLVNLGCATGHPSFVMSASFTNQVLAQIELWTNPGKYEKQVYTLP
                     KQLDERVAHLHLKKIGANLTQLTKEQADYIGVPLEGPYKPEYYRY"
     gene            complement(1962..>2251)
                     /locus_tag="VE844_10400"
     CDS             complement(1962..>2251)
                     /locus_tag="VE844_10400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010959509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methionine adenosyltransferase domain-containing
                     protein"
                     /protein_id="HZC01744.1"
                     /translation="SYAIGVAEPTSISVETFGTGEVPEAHLIPAIRKHFDLRPRGIIH
                     MLDLLRPIYRQTAAYGHFGRNEPDLTWERTDKVEALRDALGITGAFEAKAG"
BASE COUNT          491 a          635 c          594 g          531 t
ORIGIN      
        1 ctgcgttgta aaaatactga gtgatggcgc tgtttgcccc ggcgtcgacc ttacacttga
       61 aattgtccag atcacttttg gcgctaggag cctgaggatg aaactcggga taggctgcca
      121 cctcgatatg gaaataatcg cccgtctccc ggcggataaa tgcgaccagt tcattggcgt
      181 accggagctc accgtaactc gccaaacccg acggaagatc acctcgaagc gccacaatac
      241 ggttaatacc cgcctcttta taggcattga gtacatcccg aatagtttgg attgaacaac
      301 cgatgcagga gatatggggg gccacaggta tacccgtgcg ctcccggatc tcgagcaccg
      361 tctcaaaggt cttctcacgg ctgctgccgc ccgcaccaaa agtgactgaa aagtaatcgg
      421 gtttcagtgg tgcgagccta tcgcgggtgg tctgaagccg accaatctac tccggtgtcc
      481 gtggtggaaa gaattcaaaa ctgaatacct gcttgtggtt ccgttgtgat tgcataagct
      541 aaggataaaa attaggagct tggcgtgtag gggccgactt gatcaactcc ttacgcctgt
      601 cccctgctag taccgataat actcaggttt atagggaccc tctaggggga caccgatgta
      661 gtctgcctgc tcctttgtaa gttgggtcaa gttggcgccg atctttttga gatgaagatg
      721 cgctacacgt tcatcgagct gcttaggcag ggtatagacc tgcttctcgt acttgccggg
      781 attggtccag agttcgatct gggccagcac ctgattagta aaggaggccg acatgacaaa
      841 gctcggatga ccggtcgcgc agcccaagtt taccaacctc ccttccgcaa gcaagatgat
      901 ccgtttgcca tcggggaaga tcacatgatc cacctggggt ttgatgtttt cccaacgata
      961 ttgacgcagg gaggcgacat cgatctcggc atcgaaatga ccgatattgc agacaatcgc
     1021 ctggtttttc atgagcttca tgtgcgcgtg ggtgatgacc tggatgttac cggtcgccgt
     1081 gataaagaga tcggcgagcg gtgcggcctc atccagggta accacccggt agccttccat
     1141 tgcagcttgt agggcgcaga tcggatcgat ctcgccgatc cacacgcttg cacccaaacc
     1201 ccgcaatgcc tgggcacagc ctttgccgac atccccgtaa ccggctatca cggcgatctt
     1261 accggcgatc atgacatcgg tcgcccgttt tatgccatcc atcagggatt cgcggcaacc
     1321 gtaaaggtta tcgaacttgg acttggtgac cgaatcattg acattgaagg caggcaccct
     1381 aagcgtcccg gccttgacca tctcgtatag ccggtgcacg cctgtcgtgg tctcctcgga
     1441 aagtcctcgc acgtccttga gcaattccgc atactgctcg tgcatgatct tagtcagatc
     1501 cccaccatca tcgaggatca tcgtggggcg ccagccctca ggtccaaaga tcgtctgctc
     1561 gatgcaccac cagaattcct cttctgtttc ttccttccag gcaaataccg gtacaccccc
     1621 tgcggctata gccgcggcgg catggtcctg ggtagaaaag atgttgcagg aagaccagcg
     1681 aacctcagct cccagcgcga tcagcgtttc aatcaagacc gccgtctgaa tagtcatgtg
     1741 caggcagccg gcaatgcgtg ctcctgccag cggctttgtg ctcgcatact cctctcggag
     1801 cgccataagc cctggcatct cggtctcggc aatcgcgatc tccttgcgtc cccagtccgc
     1861 aagtttgatg tcggcaacct tgtgatccgc tttgatactt tttatcggtt caatactcat
     1921 ggatactcct taaccgagtt tgggattttc agttggatgg cctagcccgc tttggcctca
     1981 aaagcacctg ttattcctag cgcgtctctt aatgcttcta ccttatcggt gcgctcccag
     2041 gtgagatccg gctcatttcg cccaaagtgg ccataggcgg ccgtctggcg gtaaatgggg
     2101 cggagcaggt ctaacatatg aataatcccc cggggccgca gatcaaagtg cttgcgaatg
     2161 gccggaatta aatgggcttc gggcacctct ccggtgccaa aggtttcaac gctgatggag
     2221 gtcggctcag ccaccccaat cgcgtaagac a
//
LOCUS       DASQSL010001010         1125 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_158401, whole genome shotgun sequence.
ACCESSION   DASQSL010001010 DASQSL010000000
VERSION     DASQSL010001010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1125
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158401"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            115..920
                     /locus_tag="VE844_10405"
     CDS             join(115..460,460..920)
                     /locus_tag="VE844_10405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007907679.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZC01745.1"
                     /translation="MEPRKPYPTDLTDREWTLIAPYVPRAKRGGRPEHYPKREILNGI
                     FYIVRGGGAWRILPHDFPPWQIVYHYFWIWRQDGTWPLMHDLLRGDVRVATGKRRQPS
                     AGIIDSQSVKTTEKRGIRGFDAHKQIKGRKRHILVDTLGLLLTVVVTAANVQDRDGAK
                     LLLEVLRHRFSRLRLIWADQAYAGALLTWVWTLRPRRKVCLEIVKRPKGIKGFQVLPW
                     RWIVERTFGWWGRYRRLSKDYEYLPQTSEAMIRVAMIHLMVRRLARLTCF"
BASE COUNT          247 a          317 c          319 g          242 t
ORIGIN      
        1 ggaaggcgta gtggaattcg ggcctgtgcc gtgttcttgt ggaacttgcg cctcaccttg
       61 aaagcgtgtt taaaaacttt gtcactcgtg agggactggg ggtaagattt gggtatggaa
      121 ccccgaaaac cttatccaac tgacctcacc gaccgcgaat ggacattgat tgcaccatac
      181 gtgccccgag ccaaacgggg cggacgaccg gagcactacc ccaagcgcga aatcctcaac
      241 ggcatctttt atatcgtgcg tggcggcggt gcctggcgga tcttaccgca tgacttcccg
      301 ccgtggcaga tcgtctatca ctacttctgg atctggcgtc aagacgggac ctggccactc
      361 atgcacgacc tgttgcgggg cgatgtgcgg gtggctacgg gtaaacggcg gcaacccagt
      421 gcggggatca tcgacagcca atcggtcaag accactgaaa aagggggatc cgcggctttg
      481 acgcgcacaa acagatcaaa ggccgcaaac gccacatcct cgtcgatacg ctcggcttgc
      541 tgctgacggt cgtcgtcacc gccgccaatg tgcaagaccg cgatggggca aagctgctgt
      601 tggaggtcct gcggcatcgg ttttcccggt tgcgcctgat ctgggcggat caggcgtacg
      661 ccggggctct cctcacgtgg gtctggacgc tacggccccg gcgcaaagtc tgcctggaga
      721 ttgtcaagcg gcccaaaggt attaagggct tccaggtact cccgtggcgt tggatcgtgg
      781 agcggacctt cggctggtgg ggccgttacc gccgattatc caaagattat gaatacttac
      841 cccagaccag cgaagccatg atccgtgtgg cgatgatcca cctcatggtc cgccgcctgg
      901 ctcgtctgac atgtttttaa acacgctcta atctcgactt ttgccctttt tccgtaagta
      961 tctacaaatg cagcgattta tataagcaac atgtcttgca tagctgaggg cgagaaagtg
     1021 tgactccaca agaagttacc taccttagca acgcaaaaag ggcaaaagtc gaactgagca
     1081 gctataccga ctcccgctga atcgtgtcct caatcgcctc cagta
//
LOCUS       DASQSL010001011         1199 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_102897, whole genome shotgun sequence.
ACCESSION   DASQSL010001011 DASQSL010000000
VERSION     DASQSL010001011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102897"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..432
                     /locus_tag="VE844_10410"
     CDS             <1..432
                     /locus_tag="VE844_10410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01746.1"
                     /translation="TGGAIGIAFLISIIAGRPLTLAAAQSWQPGIAQELQTLYRNNPA
                     VRQEFQVSATVWGLGGLAEALIRIPSIYLLPIDVMVGLSTALMVVTNGGLLIWNLRYS
                     AGRQRLLGQATGDPLPPEATAANPTSRSPHGSTVCAGRISG"
     gene            698..1063
                     /locus_tag="VE844_10415"
     CDS             698..1063
                     /locus_tag="VE844_10415"
                     /inference="COORDINATES: protein motif:HMM:NF025449.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PGDYG domain-containing protein"
                     /protein_id="HZC01747.1"
                     /translation="MIHTLEGPVAFEPGDYLARGIQSEEYPISPETFGALYVVDTLEP
                     DTRGFASYRPAPLLHRAVQIAEPFSVERADGGLFTGKAGDYVVQTVGLEGARIVDRSI
                     FEQLTKKNVSSWTSVTHCG"
BASE COUNT          253 a          347 c          350 g          249 t
ORIGIN      
        1 accggcggtg ccatcggcat cgccttcctg atcagcatca ttgccggacg cccgttaacc
       61 cttgcggccg cgcagagctg gcaaccgggc atcgcccagg aacttcagac cctctaccgc
      121 aacaatcccg ccgtccgcca agaatttcag gtcagtgcca cggtgtgggg gctgggcggg
      181 ctcgccgaag ctctcatccg gataccttcg atctacctgc tgccgatcga cgtgatggtc
      241 gggctgtcca ccgcgctcat ggtggtgacc aacggcgggt tgctcatatg gaacttgcgc
      301 tactccgcgg gccgtcaacg ccttctcggc caagcgacgg gtgacccgct gccaccagaa
      361 gctaccgccg cgaatccgac ctcccgctcc ccgcatggct ctacggtatg cgccggaaga
      421 atcagcggat agctatggtc ggtcataacc gcactccgag acccgttcgc ctgcgacgag
      481 acgactcgtc agccacctgg tggctgactt ccacctggta tccgcgttga caggacaaat
      541 aaaatgcgaa gaggagagtg ttttcttccc aagggggatt ccgtgtatct gaccagtaaa
      601 gataagcgac ttaccatttc gatcctatct gaaagccgcg tcgtttcggc ttcgagcacg
      661 ccgactcaca caagaggacg ttgagcagag agcaggagtg attcacacac tggaaggtcc
      721 agtagcgttt gagccgggag actacctggc tcgggggatt caaagtgaag aatatcctat
      781 cagcccagaa acctttgggg cgttgtacgt cgtagataca ctggaaccag atacgcgggg
      841 atttgcttct taccgtcccg cccctcttct ccatcgggcc gtccagatcg ccgagccttt
      901 ttcggttgaa cgagcggatg gaggtctttt cacgggcaaa gcgggtgatt atgtggtgca
      961 aacagtggga ttggaaggag ccaggatcgt tgaccgttcc atctttgagc agcttaccaa
     1021 gaagaacgta agtagctgga cttcggtaac tcactgcggt tgaatgtcac cgtgtgtgat
     1081 aacgatggtc gaaagttaga ccaccagact ctggaagtca ttcgcatccg ggcagtgggg
     1141 cagatccagg ctggtgctca tcccgagggt gtggccaagt cgctgggaat gcgccgctc
//
LOCUS       DASQSL010001012         1909 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_76198, whole genome shotgun sequence.
ACCESSION   DASQSL010001012 DASQSL010000000
VERSION     DASQSL010001012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1909)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1909)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1909
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76198"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..>1909)
                     /locus_tag="VE844_10420"
     CDS             complement(106..>1909)
                     /locus_tag="VE844_10420"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HZC01748.1"
                     /translation="QMTRAFHANLIASSLLALLVGAFLIYNTMSFVVVQQRPLIGTLR
                     TLGVTRRQVFRGILGQAMIIGAIGTAAGLALGMGLGPGLTRLVTRTINDIYFTLTVRQ
                     LSLDPFILAKGIILGVAATLAAALMPAHEATSVTPRQALTRSQLESKVSHGLLGAAFA
                     GVVMVALGGGIILWSGKSMVFGFIALFAVIFGCALLTPLATVGSITLLRSLVGRWFGV
                     LGQLSSRAVTAALSRTAVAIAALMVAIAAIVSIGLMIASFRIAVVDWLQNVLRADMYI
                     SLPGPRSAAPVSTIDPELARRLAEAPGVAAVSTVRWLEIELQNSLIKLIVYAMVPNSY
                     AAFRFKEGDPARIWPAFEHGGAVLISEAYAYHHGLHPGATLRLRTDQGMRDFPIAGVY
                     YEYSSDQGVIAMSRRTFERYWNDRMLTSLGIYAAPGVDDTQLRATVQRLIEPEQALVI
                     SSSRSIREASMKIFDRSFAITEVLRLLAALIAFVGIVSALMALQLERTRELGVLRAIG
                     VTPRQLWRLVMVETGLMGLIAGLLALPVGTATAALLILVLNQRSFGWSMDLQISPEIL
                     LQGLALAIAAALLAGIYPALKMARTSPAEALRTE"
BASE COUNT          440 a          581 c          577 g          311 t
ORIGIN      
        1 cctccgtata ggtaggcaaa tagacaaaaa atagcttata ccgtgcatga aacaccttgt
       61 caatctctct gtaccgacgc gagaggcgat cctcctcagc accggttatt cggtccgcaa
      121 ggcctcggcc ggcgaggtcc gcgccatctt caaggcggga tagataccgg caagcagtgc
      181 ggcggcgatc gcaagcgcaa gcccttggag caggatctcc ggggagatct gaagatccat
      241 actccagcca aaggagcgtt ggttcaggac caagatcaag agcgccgcgg ttgcggttcc
      301 gacaggcagg gccaaaagcc cggcgatgag ccccatcaga ccggtttcta ccatcaccaa
      361 gcgccacaac tgccgaggcg tcactccaat ggcgcgcaac accccgagct cacgtgtgcg
      421 ctcaagctgc agtgccatca aggcgctgac tataccgaca aaagcgatca gggcggcgag
      481 cagccgcagc acctcagtaa tggcaaagct gcggtcgaag atcttcatgg acgcctcgcg
      541 gatggaacgg ctggaactga tgacgagcgc ttgctcgggc tctatgaggc gttgcacggt
      601 ggctctcaac tgcgtgtcat cgaccccggg cgccgcatag atcccaaggc tcgtgagcat
      661 gcggtcattc cagtagcgct cgaaggtacg ccggctcatg gcgatgaccc cctgatctga
      721 gctatattca taataaaccc cggcgatggg aaagtcgcgc atgccctgat cggtacgcaa
      781 gcgcagtgtc gcgccgggat gcaggccatg atgataggca taggcttcgg agatcaacac
      841 cgcccccccg tgctcgaaag ccggccagat ccgggccgga tcgccttcct tgaagcggaa
      901 ggccgcgtag gaattgggca ccatcgcata gacgataagt ttgataaggc tattttgcag
      961 ctcgatctca agccaccgga cggtgctcac cgccgcgaca ccgggggcct cggcgagccg
     1021 gcgtgcgagc tcgggatcga tggttgagac cggcgccgcc gagcgtggcc cgggcaaaga
     1081 aatatacata tcagcacgca gcacgttttg caaccaatcg actaccgcga tgcggaaact
     1141 tgcgatcata agcccgatgc tgacgatagc ggcgatagcg accattaagg ccgcgatcgc
     1201 cacggcggtg cggctcagtg ccgcagtgac cgcccggctt gagagttggc ccaagacccc
     1261 gaaccaccgt cccacgagcg accgcaacag ggtgatcgag cccacggtag ccaagggggt
     1321 cagcaaggcg caaccaaaga taacggcgaa taaggcaata aatccgaaga ccatgctctt
     1381 ccccgaccac aggatgatcc caccgcccaa agccaccatc acgactcctg cgaacgctgc
     1441 accgaggagc ccgtggctta ctttggattc gagctgcgaa cgggtgagcg cttgccttgg
     1501 cgtcacgctt gttgcttcgt gcgcgggcat gagagccgca gcaagcgtgg cggccacccc
     1561 gaggatgata cctttggcga gaatgaaggg gtcgagactc agttgcctga ccgtgagcgt
     1621 aaagtagata tcgttgatcg tgcgggtcac gagccgagtc agcccgggcc caaggcccat
     1681 ccccagggcc aaaccggcgg ccgtgccgat ggcgccaata atcatggcct gcccgaggat
     1741 cccccggaat acctgccgcc gagtcactcc aagcgtgcgc agtgtgccga tgagcggacg
     1801 ttgctgcacc actacaaagc tcatggtgtt atagatcaga aaggccccaa ccaagagcgc
     1861 caaaaggctt gaggcgataa gattggcgtg aaaggcgcgg gtcatctgc
//
LOCUS       DASQSL010001013         1300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_185446, whole genome shotgun sequence.
ACCESSION   DASQSL010001013 DASQSL010000000
VERSION     DASQSL010001013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185446"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..423)
                     /locus_tag="VE844_10425"
     CDS             complement(<1..423)
                     /locus_tag="VE844_10425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002975287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia permease"
                     /protein_id="HZC01749.1"
                     /translation="MVDTVWVLVTAFLVFFMNLGFALVESGLSRSKNTVNILAKNFIV
                     FAVSSLSFYVIGWGLMFGDGNALFGTEGLFFVSGADNSPATAKEYAGVYGALNWAGVP
                     LWAKFFFQLVFAGTAATIVSGAVAERIKFHAFIVFSFVM"
     gene            complement(971..>1300)
                     /locus_tag="VE844_10430"
     CDS             complement(971..>1300)
                     /locus_tag="VE844_10430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01750.1"
                     /translation="NGKKGIYMGIGLAPGYTFFSDASTPLNVSLPMTFGFSLKDYYTV
                     DGGQTFGYFSGGPLFTAQLKFIPPEYGSWALKAGVQLLVLNSNLEKVNTDENFVPIGS
                     IGVAMTY"
BASE COUNT          305 a          415 c          349 g          231 t
ORIGIN      
        1 catcacaaac gaaaagacga taaacgcatg aaacttgatg cgctccgcca cggctcccga
       61 gacgatcgtc gcggccgttc cggcgaacac cagctggaag aagaacttgg cccacagggg
      121 cacgccagcc cagttaagcg cgccataaac cccggcatac tcttttgccg tcgccggact
      181 attgtcagcg ccgctgacga aaaacaagcc ttcggtaccg aagagtgcat tgccatcccc
      241 gaacatcaat ccccagccga tcacgtagaa ggacagggag gagacggcga acacgatgaa
      301 attcttggcg agaatattga cggtgttctt actccgcgac agaccagact cgacgagagc
      361 gaacccgagg ttcatgaaga acaccagaaa tgccgtcacc aatacccaaa cggtatccac
      421 catcaccttc agatcggcca ctgtctgggc gaggtccggc ggcgtactct ctgccgccca
      481 tgccagaccg aagctcgtcc ccagaagcac caaccagatc cacattccca ccttgaatcc
      541 gcgctcaccc tcgaacatga taaccctcct ccccttcttc gcaaaaactc cgcaaggcta
      601 tggcagctca gcccccagag gaagccacct taagccgcca aaactcttcg gcacgacaga
      661 gcaaggcatg tgccgatggc cgtatgccca tgaaatgctg cccggacctg aactcacgcc
      721 ggtacgcttg ctcacacgct gagcacacat ttccgcagtg cccaagaatt atgcaacgat
      781 gagaactcca acgctccagc gcagctatcg cggacacgga agatgaatcc cgccgccttc
      841 gggcctcggt ttttcgccga acggacaggc cgaactctgc gccggtggca gtgtgcgcga
      901 tgcgctgcac acgttggtgg cagtgtgcaa cgccgggtgg ctgacatgac cgtctgcatg
      961 ggtgccgtca tcaatacgtc atcgccacgc cgatgctgcc gatgggcaca aagttttcgt
     1021 cggtgttgac cttctccagg ttgctgttga gcacgagtag ctggacaccc gctttcagcg
     1081 cccagctccc gtattccggg gggatgaact tgagctgcgc cgtgaatagg gggccgcccg
     1141 agaagtaccc gaaggtctgg ccgccgtcga ccgtgtaata gtctttgagg ctgaagccga
     1201 acgtcatggg cagactcacg ttgagcggtg tcgaggcgtc cgagaagaac gtatagccgg
     1261 gggccaagcc gatccccata tagatgccct tcttgccgtt
//
LOCUS       DASQSL010001014         2214 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_60630, whole genome shotgun sequence.
ACCESSION   DASQSL010001014 DASQSL010000000
VERSION     DASQSL010001014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2214
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60630"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1258
                     /locus_tag="VE844_10435"
     CDS             <1..1258
                     /locus_tag="VE844_10435"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZC01751.1"
                     /translation="LLLLNLVVISTGFYMLMPYLSSYLGNTLGFTAWMVGLVLGMRTF
                     SQQGLYVIGGTFSDRLGYKSVIAGGCALRMAGFLLFGYANSLSTVLLAALLSGLGGSL
                     FAPAARAYIASESGDQRVEAFALFQVSEGLGACLGPLLGIALIQVSFQWVSVVASTIF
                     FMLTVLQLLYLPRRDQLGTTAPRPVMEEWREVLGNRLFVVFAVGMVAYLTLYNQLYLS
                     LPLEVRRLTGNDSATGILFTMSALLSILTQVHITAYAKAHWRPLQAITLGLVCMAAAF
                     VPMLVAGPFLPLEATLIATSPVETVHVFLIKALNLSPAVLSAALLSLGTMILQPFVLS
                     LIPVLGGNRLLGTYFGFYYMVQGIGVIVGNLAIGVAFDLGQSWGVTSVPWLLLLGLGL
                     ASALSIMALDGRGRIAQVALLSAQKA"
     gene            1713..1910
                     /locus_tag="VE844_10440"
                     /pseudo
     CDS             1713..1910
                     /locus_tag="VE844_10440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013221298.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            1822..>2214
                     /locus_tag="VE844_10445"
     CDS             1822..>2214
                     /locus_tag="VE844_10445"
                     /inference="COORDINATES: protein motif:HMM:NF012464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZC01752.1"
                     /translation="MEGWCRGTWHKISGYRSRHCIDGYRLQVVRTNGLCGAERGQRKW
                     KQKLPRFSFRCYTKAYTDTITGTKQERPGLEAALSHLREGDTFVVWRLDRLGRSLKHL
                     IETVTALQKQHIGFKSITENIDTATATGQ"
BASE COUNT          409 a          638 c          639 g          528 t
ORIGIN      
        1 actccttttg ctcaacctgg ttgtgatcag cacgggcttt tacatgttga tgccttacct
       61 gtccagttac cttggcaaca cactcggttt cactgcctgg atggtgggtt tggtcctcgg
      121 gatgcggact ttcagtcagc aagggttgta tgtcattggc gggacgttct cggaccgcct
      181 tggctataaa tcggtgattg cggggggctg tgccttgcgt atggcgggtt tcttgctctt
      241 tggctacgcc aactctctgt ccacggtact ccttgcagcc ttgttgagcg gccttggtgg
      301 ctcgctcttt gcgcctgccg cacgggctta tatcgcctct gagtcgggtg accaacgcgt
      361 cgaagccttc gccctctttc aggtgagcga aggcttggga gcatgtctcg gccctttgct
      421 cggcatagcg ctcatacagg tgagttttca gtgggtcagt gtcgttgcca gcaccatctt
      481 tttcatgtta acggttctac agcttctcta cttgccaagg cgcgatcaac tcggcaccac
      541 cgcgccgcgt ccggtcatgg aggagtggcg ggaggtgctg ggcaatcgcc tgttcgtggt
      601 ctttgccgtc ggcatggtgg cctacttgac gctctacaat caactctacc tcagcctacc
      661 cctcgaagtt cgacgcttga cgggtaacga cagcgcgact ggcattctct tcacgatgag
      721 tgcgttgctg agtatcctga cacaggtgca catcacagcg tacgcaaagg cgcattggcg
      781 gcctctccaa gccattacgc tcggtctcgt atgcatggca gcggcatttg tcccgatgct
      841 ggtcgccggt cctttcctac cgctcgaggc gacgctgatt gccacgagtc ctgttgagac
      901 cgtacacgtt ttcctgatca aggcccttaa tctcagcccg gccgttttga gtgccgccct
      961 cctttcgctc ggcaccatga tcctgcaacc ctttgtcctc agcttgatcc cagtcctggg
     1021 tggcaatcga ctgctaggca cctatttcgg cttctattat atggtgcagg gcattggagt
     1081 catcgtaggc aatcttgcca ttggcgtggc atttgatctc ggtcaatcat ggggtgtgac
     1141 gagtgtccct tggctgctcc tgcttggcct cggccttgcc tctgccctca gtatcatggc
     1201 cctggatggc agggggcgga tcgctcaggt cgcgctgctg tcggcccaaa aggcctaagg
     1261 gcacgatctg cgatcagcgc cgagccatat tcagcatgca gcgtggtcgc accgtcgccg
     1321 ctcgtcgtcg atcacgctgc cggccggggg cggacctcct tgcatgcgat gtgcgcctcc
     1381 atataatggt cgctgaccaa cacatgacag gcgcggcgac gtgaggacgg ataaatcgtg
     1441 cgggacaccc atgcctgctg tgagccacac tccccctcaa ttgatgcgta tctctcagca
     1501 attcccgctc tggcctaaag atcgtatgcg acttatgtcg gaagtcctct cggagccatt
     1561 tgatgaccta tttctcactt ttgtcacaac tggtacggcg agcatcgatg tcagactcgg
     1621 tacccagcca cttcttgcct tcgttgacgt agagctccgc tacggccatg gcataccaga
     1681 agaggccgtg gcatcagaaa acggataggt ttgccgagcg gacgaaggcc ggtctggacg
     1741 cggcgcgcaa gcgagggcga atggtcggcc gtaaacgccg tatgacaccg agccagatcg
     1801 cgtctgccaa acagctgctg cgtggaggga tggtgccgcg ggacgtggca caaaatctcg
     1861 gggtatcgat cccgacactg tatcgatggg taccggcttc aagtcgttag aaccaatggg
     1921 ctctgcgggg cagaaagggg gcagaggaag tggaagcaaa aacttcccag gttttcgttc
     1981 cgttgctaca caaaggccta caccgataca atcaccggta ccaagcaaga gcggccaggg
     2041 cttgaggccg cgctctcaca tctgcgggaa ggtgatacgt tcgtggtctg gcggctggat
     2101 cggttaggac ggtcgctcaa acacttgatt gagaccgtta ccgcgctgca gaagcaacac
     2161 attggtttta aaagcattac cgagaatatt gataccgcaa ccgccaccgg ccag
//
LOCUS       DASQSL010001015         1032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_113599, whole genome shotgun sequence.
ACCESSION   DASQSL010001015 DASQSL010000000
VERSION     DASQSL010001015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113599"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            180..662
                     /locus_tag="VE844_10450"
     CDS             180..662
                     /locus_tag="VE844_10450"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC01753.1"
                     /translation="MEKTLSSQATNWREGRRFRAWELHQKGWKQQEIADALGVTQGAV
                     SQWLKRVKEEGVAGLRHRPPPGPAPRLSPEQRGQLLELLAQGAESFGFQGDVWTQPRV
                     ATLIRDRFGVSYDFSQVGRILKAEGWSRQKPVHRATQRNEAVIQRWKEEGWPQIKKRR
                     "
     gene            635..>1032
                     /locus_tag="VE844_10455"
     CDS             635..>1032
                     /locus_tag="VE844_10455"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01754.1"
                     /translation="MAPDQKKAIEEGRTLVFVDQTGFYLLPGVVRTYAPVGQTPLIRA
                     PLSRDHLSVMGGITPEGKLYLMVQERAYRGKDVVRFLKHLGQHIVGKLLVLWDGAPIH
                     RSRLVKEYLAGGAAHWIHLEQFPSYAPELNP"
BASE COUNT          224 a          276 c          332 g          200 t
ORIGIN      
        1 gaaatgctcg acgatcgacg cgttcacggt aacagccata ggtcatgctc ctctgcagat
       61 agctcctgtt gtgagaagca taatagaggc agtgtgacag ggtgacagca gcgttattac
      121 tgatccctga atgaaaaact aataccctga tttttccagg atctagtaga cttggcggta
      181 tggagaagac cttatcaagc caagctacca attggcggga aggccgccgg tttcgtgcct
      241 gggaactcca tcagaaaggt tggaaacaac aagagattgc tgatgccctg ggcgtgaccc
      301 aaggggcggt tagccagtgg ctgaagcgag tcaaggaaga aggggtggca ggcttgcgcc
      361 accggccgcc ccctggccca gcgcctcgcc tctctccaga acaacgaggc caactgctgg
      421 aactcctggc ccagggagca gaatctttcg gcttccaggg ggatgtatgg acccagccca
      481 gggtggctac cctgatccga gatcggttcg gggtctccta cgacttctcc caagtgggcc
      541 gcatcttgaa ggctgagggc tggagccgcc agaagccggt gcatcgagcg acccagcgga
      601 acgaggccgt catccagcgg tggaaggaag agggttggcc ccagatcaaa aaaaggcgat
      661 agaggagggc cggactctgg tctttgtgga ccagactggg ttctacttgt tgcctggggt
      721 ggtgcggacc tatgccccag tgggccagac ccccctcatt cgtgctcccc tgagccgaga
      781 ccacctgtcg gtgatgggcg gtatcacccc agaaggcaag ctgtacctga tggtccagga
      841 gcgggcctac cgagggaagg atgtggttcg gttcctcaag cacctggggc agcatattgt
      901 ggggaagctg ttggtgctgt gggatggagc tcccatccac cgcagccggt tggtaaagga
      961 gtacctggct ggaggcgcgg ctcactggat tcacttggag cagtttccca gctatgcgcc
     1021 agagttgaac cc
//
LOCUS       DASQSL010001016         2820 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_129103, whole genome shotgun sequence.
ACCESSION   DASQSL010001016 DASQSL010000000
VERSION     DASQSL010001016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2820
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129103"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1259)
                     /locus_tag="VE844_10460"
     CDS             complement(<1..1259)
                     /locus_tag="VE844_10460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009961787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC01755.1"
                     /translation="MYLRCNRRFKDGKEHCYWNIVESKRCADGRVVQRQVLYLGEIND
                     SQHEAWCRVVEVFDEDTRRRTQLALFPVERGLPEYAKAYSVQVRLDAMQLHRPRQWGA
                     CWLACRLYEQLGLDHFWQARLADSREGTRWRHILQTLVVYRLLDPGSEWRLHRSWFEQ
                     SAMADLLGADYALVEKNALYRCLDKLLPHKRALFHHLTERWQDLFGVRFDILLYALTS
                     TYFESPPPQDEKDKRRFGYSRDKRRDCVQVVIALIVTPEGFPIAYEVLAGNTADKTTL
                     KMFLEKIEMQYGKAERIWVMDRGIPTEDVLEDMRTADPPVYYLVGTPRGRLTKLERDL
                     LPWPWQAVCTGVSVKLLPQDGELYVFAESRDRIHKERAMRQRQLKGLVKRLKQLQQMK
                     FNDTRQLLLKLGEAKGRYRAAWRLIEGV"
     gene            1777..2715
                     /locus_tag="VE844_10465"
     CDS             1777..2715
                     /locus_tag="VE844_10465"
                     /inference="COORDINATES: protein motif:HMM:NF013753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01756.1"
                     /translation="MAGDYLTWALDDFSGYIAADELYDGPFCVLSIVDNRRFKRLVYE
                     VLDHNPTHEDIRRFFRRFKTAINAYHLTVLGITTDASPLYPAPIAEIFGPVPHQICEF
                     HIVAEITKAVLKAVAKVRKTLTAQIPKLPRGRPTSKAAKHKARAKHALRQKVTNLFDH
                     RYLFVQHSLTPSERKTLARISRGHPQLRALREIMDEVYRLFDRRCRSETALQKLAKLR
                     RRVCRFQKLGKSLQKLFSPNLEKALTFLDDKLLPSTSNAVERSNRRHRKMQKTVYRVR
                     TRENISNRIALDMLRDAQAEGRNHTTRILHLARDKS"
BASE COUNT          597 a          899 c          749 g          575 t
ORIGIN      
        1 acgccctcga tcagccgcca agcggcccga taacgcccct tggcctcgcc cagcttgagc
       61 agcaactggc gcgtgtcgtt gaacttcatc tgctgcagtt gcttcaagcg cttcaccagc
      121 cccttgagct gccgctggcg catggcgcgt tccttgtgga tgcgatcacg gctttcggcg
      181 aacacataca gttcgccgtc ctgcggcaac aacttcacgc tgacgcccgt gcacaccgct
      241 tgccagggcc aggggaggag gtctcgttcc agtttggtga gcctgcccct cggcgtaccg
      301 accaggtagt acaccggcgg atcggccgtg cgcatgtctt cgagcacgtc ctcggtggga
      361 atgccgcggt ccatcaccca gatccgttcc gcttttccgt attgcatttc gatcttctcc
      421 aagaacatct tgagcgtggt cttgtcggcg gtgttgcccg ccagcacttc gtaggcgatg
      481 gggaaaccct ccggggtaac gatcaaggca atgacgactt gcacgcagtc gcgccgcttg
      541 tcgcggctgt aaccaaagcg gcgcttgtcc ttttcgtcct gaggcggcgg ggattcgaag
      601 taagtgcttg tcagagcata gagcaggatg tcgaagcgga caccgaacag gtcctgccag
      661 cgctcggtca aatgatggaa tagcgcgcgt ttgtggggca gcaacttatc aaggcaacga
      721 tacagcgcat tcttctccac cagcgcgtag tctgcaccca gcagatcggc catcgcgctt
      781 tgctcaaacc acgatcggtg caggcgccat tcgctaccgg gatcgagcaa gcggtaaacc
      841 accagggtct gcaggatgtg gcgccaacgg gtgccttctc gactatccgc caagcgtgct
      901 tgccagaagt gatcgagccc gagttgctcg tacaaccggc aggcaagcca gcaggcaccc
      961 cattgccgcg gccgatgcaa ttgcatcgcg tccagccgca cctggacgct ataagccttg
     1021 gcgtattcgg gtagcccccg ctcgacggga aataatgcca gttgcgtgcg ccgtcgtgtg
     1081 tcttcatcaa acacctcgac caccctgcac caagcctcgt gctggctgtc gttgatctcg
     1141 cccagataca atacctgacg ttgcaccact ctaccatcgg cacagcgctt ggattcgaca
     1201 atgttccagt agcagtgctc tttgccgtct ttgaagcgcc ggttgcatcg caggtacata
     1261 atgccgcccc attgtatgca aagcccggcg actgacaaga cacttggtct acactacagc
     1321 cagtttgaaa ctcgatcccg agtgttaatg cgccttccag aagtataaac ctcgaaaact
     1381 cggcatttct tgcggtgagt tgagaaagtt gggctataaa gggtgcagat gcccttgttg
     1441 cggcagaaga gcttatcgac tgcggcgcgc cgaacgtctc ctacacgacc tgggtgatct
     1501 gaagtccggg cgctcccacg atatccacct catctattct cagcatcact gctcccactg
     1561 cgaccattat ttcaacgccg acacgtccga tttggcccta cccggaagcc attatacgca
     1621 ccgggtcgtt gccgtcgctg tgcgcttggt cgtggaagat gggttgccgt accgggccgc
     1681 ctcgtggcac ctctggcgtg accatcgggt cttcgtcccc ttcgccaccc ttcaaaactg
     1741 gatagaagcc agtggggaaa aaaagcggca gcgcgaatgg cgggggatta cctcacctgg
     1801 gcgctcgacg acttctcggg ctatatcgcc gccgacgaac tctacgacgg gcccttctgt
     1861 gtgctgtcca ttgtcgataa ccgccggttt aaacggctcg tctatgaggt cctcgatcac
     1921 aaccctaccc acgaggacat ccggcgcttt ttcagacgct tcaagacggc cattaacgcc
     1981 taccacctga ccgtcttggg gatcaccacc gatgcctcac cgctctatcc cgcgccgatt
     2041 gccgagatct ttggccccgt accgcatcag atctgcgaat tccatatcgt cgccgagatc
     2101 accaaggcgg tgctcaaggc cgtcgctaag gtgcgtaaga cgctcaccgc gcaaatcccc
     2161 aaacttcccc gcggtcgtcc tacgtcgaag gcagcaaagc ataaggcccg cgccaagcac
     2221 gctctgcggc agaaagtcac caacctgttc gaccaccgct acctcttcgt ccagcactcc
     2281 ctgaccccta gcgaacggaa gacgcttgcc cggataagtc gcgggcaccc ccagctgcgt
     2341 gcgctgcggg agatcatgga cgaggtctac cggctctttg accgccgctg ccggagcgag
     2401 acggccctac agaagctggc caagctccgc cgccgggtgt gccgcttcca gaagctcggc
     2461 aagtccctcc agaaactctt cagccccaac ctggaaaagg cactcacctt cctcgacgat
     2521 aagttgctcc cttcgacttc caacgccgtg gaacgcagca accgtcgtca ccgcaagatg
     2581 caaaaaaccg tctaccgcgt gcgcaccagg gaaaatatca gcaaccgaat cgcgcttgat
     2641 atgcttcgcg atgcccaggc cgaagggcgt aaccatacga cacgcatact ccatctagca
     2701 agggacaaat catgaatcac tctgtaacga tgctacagtc tcgatttttt taaacaatgc
     2761 ccggataaaa agagagaaaa taaatccagg tgatccgtgg agatattatt ttgacgtaag
//
LOCUS       DASQSL010001017         1402 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_60641, whole genome shotgun sequence.
ACCESSION   DASQSL010001017 DASQSL010000000
VERSION     DASQSL010001017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1402)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1402)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1402
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60641"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..403)
                     /locus_tag="VE844_10470"
     CDS             complement(<1..403)
                     /locus_tag="VE844_10470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020816886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01757.1"
                     /translation="MLHQLRRKLRQILMVHPLGRRILYQYRWLKFRVKLARQPQKRIE
                     VGASGRFEHGWLPTNKDFLNLLKPTDWARLFPPASLDAILAEHVWEHLTEQEGLIAAR
                     ICFKYLKPGGYLRVAVPDGLHPDPEYIEWVRV"
     gene            complement(591..857)
                     /locus_tag="VE844_10475"
                     /pseudo
     CDS             complement(591..857)
                     /locus_tag="VE844_10475"
                     /inference="COORDINATES: protein motif:HMM:NF015038.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(817..>1402)
                     /locus_tag="VE844_10480"
     CDS             complement(817..>1402)
                     /locus_tag="VE844_10480"
                     /inference="COORDINATES: protein motif:HMM:NF015038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01758.1"
                     /translation="HRLGARVQATAHMLHYGIGIPVRKVPVVLNALTGVQLTQGALTQ
                     DALQRVRGPLGTAYECLRAAVPQAPVVHTDDTGWRVGGAPAYLMAFETKGPTVYQIRS
                     RHRHAEVQEVIPVDYAGVLVTDRGRSYDAQAFDGMPQQKCLAHIQRSLRDVLATKTGQ
                     ARDFGEQLKSLLQEAIELWHVYRDDHRTDLQGRS"
BASE COUNT          276 a          421 c          398 g          307 t
ORIGIN      
        1 ccactctgac ccattcaata tattcagggt cggggtgcag tccatcgggg acagctacgc
       61 ggagatagcc gccgggcttg agatacttaa aacaaatgcg tgcggcgatg agaccctctt
      121 gctccgtcag gtgttcccag acgtgctcag ctaagatcgc atcgagcgaa gcgggaggaa
      181 agagacgggc ccaatccgtt ggtttcaaga gattgaggaa gtctttgttg gtgggtagcc
      241 agccgtgctc aaaacgtcca gaggcgccta cctcgattct tttttgaggt tgcctggcta
      301 gctttactct gaactttaac catcggtatt ggtaaaggat tcgtcttcca agaggatgaa
      361 ccatcaggat ctgtcgtaat ttccgtcgta attggtgtaa catagtgata ctccttgcca
      421 gataggcggg ctaattatga gggctcatca tgttttaagc cagatgagct ctaagtacga
      481 gcgtgttgtg attggggagg gcgcaacagt tgggccaagc tatccaccac agaaccagga
      541 tgggttttca tcagcgtccg gatcacacta gtgaacgccg caaacgcctc agccccacga
      601 ctgttcttcg agcactgcga taccttccgg gcgatcaccg ccgggcgcaa tgctcgctcc
      661 gcccgattgt tcgtcggttc gatccggggg tccgccaaaa agcgcagcag gttcccccga
      721 tcatgatgcc agccgagttc atttaacagc cgttggttgt cgggatcttt cagggtgcgc
      781 tgacgcagat gataggtgat ctcctcctgc agggtttcag cttcggcctt gtaagtccgt
      841 cctgtggtcg tctcgatata cgtgccacag ctctatcgct tcctgcagta gactcttgag
      901 ctgttccccg aagtcgcggg cttggcccgt cttcgtcgcc agcacgtcgc ggagcgaccg
      961 ctggatgtgc gccaggcact tctgctgagg catgccgtcg aatgcctggg catcataact
     1021 gcgtccccga tccgtcacca gcaccccagc atagtccacc gggatcacct cctgcacttc
     1081 tgcatggcga tgacgagacc ggatctgata gaccgtgggc cccttagtct cgaatgccat
     1141 cagataggcc ggcgcaccgc cgacacgcca cccggtgtca tccgtgtgca ccaccggcgc
     1201 ctgcggcacg gcagctcgca agcactcata ggcggtgccc agcggccccc gcacgcgctg
     1261 tagcgcgtcc tgcgtgaggg caccttgcgt gagctgcacc ccggtcaagg cattcaacac
     1321 gaccgggacc ttccgcaccg ggattcctat gccatagtgc aacatatgcg ccgtggcctg
     1381 cacccgtgcc cccaggcggt gc
//
LOCUS       DASQSL010001018         1178 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_76220, whole genome shotgun sequence.
ACCESSION   DASQSL010001018 DASQSL010000000
VERSION     DASQSL010001018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1178
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76220"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1178
                     /locus_tag="VE844_10485"
     CDS             <1..>1178
                     /locus_tag="VE844_10485"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZC01759.1"
                     /translation="TLRIALEADITGLDPIIPGLQNYYVMQNIYNTLVTVDANFEFVP
                     ELAESWEVQEQGKVYIFHLRQGVKFHDGTDFDAAAVKWNIERIQQEGKAPPHRFFANV
                     AAAEVVDPHRIKITMQYPTSTLLSALSTAGTGLMILSPAAAKKWGKDVSHHPAGTGPF
                     RFVSWEQNRQIVLERNPDYYKSGLPYLDRLEYKVMKEGVTREAALRAGEVDFVNWLPR
                     VSVKRLAKKADIKVLSGPEASHLYTHFNIARKPFDDKRVRQALMGYGIDRVAIAKAAT
                     LGYATPTISFVSPGARGYVDLSEMYPYDPDKARSLLKEAGFDTSNPLRYTLMTHSAEP
                     ALPDIATIMKTQLAKIGVDVTVEVVDRPIFLKRLTQTRDFEQNVNMALPFVDVGDRGF
                     "
BASE COUNT          266 a          345 c          318 g          249 t
ORIGIN      
        1 gaccttgcgc attgccttgg aggccgatat cactggtttg gacccgatca tccccgggtt
       61 gcagaactac tatgtcatgc agaacatcta caacacccta gtcacagtcg atgccaattt
      121 cgaatttgtc ccggagctgg ccgaatcctg ggaggtgcaa gagcagggaa aagtttatat
      181 ctttcacctg cgccaaggcg ttaaattcca cgacggcact gactttgacg cggccgcagt
      241 caagtggaac atcgaacgca tccaacagga gggcaaagcg cccccccatc gtttttttgc
      301 caatgtcgca gccgctgaag tcgtcgatcc ccaccggata aaaatcacca tgcaatatcc
      361 gacctcgacc ctgctgtcgg ccttgtccac ggccggtacg ggtctcatga ttctatcgcc
      421 cgcggccgca aaaaagtggg gcaaagatgt cagccaccat ccagcgggta caggtccgtt
      481 ccgctttgtc tcctgggagc agaatcgcca aattgttttg gagcggaatc ccgattatta
      541 caaatccggg ttgccgtatt tggatcgcct cgagtacaag gtgatgaaag aaggtgtgac
      601 ccgagaagcg gcgttgcggg caggcgaggt cgactttgtc aactggttgc cccgcgtgtc
      661 ggtcaagcgg ctagcgaaaa aggccgacat caaagtcttg agcggaccgg aggcctcgca
      721 cctctatacc cattttaata tcgcccggaa gccgtttgac gacaaacggg tgcggcaggc
      781 cctgatggga tacggtattg accgggttgc cattgccaaa gccgccaccc tcggatacgc
      841 cacgccgacg atcagttttg tctcgcccgg ggcgcgcggc tatgtggatc tgtcggaaat
      901 gtatccctat gatccagaca aagcccgatc tctcttgaaa gaggccggtt ttgacacgag
      961 caaccccttg cgctacaccc tcatgacgca ttccgccgaa ccggccctgc ccgatattgc
     1021 cacgatcatg aagacccaac tggctaaaat tggcgtggac gtcacagttg aagtcgtcga
     1081 ccgccccatt ttcctcaaac ggctgacgca gacgcgcgac ttcgagcaaa atgtcaatat
     1141 ggcgctgccc tttgtcgacg tgggcgaccg cggtttcg
//
LOCUS       DASQSL010001019         1046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_22416, whole genome shotgun sequence.
ACCESSION   DASQSL010001019 DASQSL010000000
VERSION     DASQSL010001019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22416"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1046)
                     /locus_tag="VE844_10490"
     CDS             complement(<1..>1046)
                     /locus_tag="VE844_10490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC01760.1"
                     /translation="VCYRLIDPGSEWRLHRQWYEQSAIGDLLGEDFGLVQIDKLYRCL
                     DRLLPPKEGLFCFLRQRWQALFEARFDVLLYDLTSTYFECDPPEEGKRKFGYSRDKRF
                     DCVQVVIALIVTPDGFPLAYEVMPGNTSDKTTLLDFLKTIEARYGKANRTWVMDRGIP
                     TEETLRQMREAHPPICYLVGTPRGRLNKLEQAFLRLPWEQVRDAVDVKLLDQAGELYI
                     LARSAGPAHKERSMRWRRLKKLLKRLHELQHQRLTRDELLLKLGAAKKEAGRASALLD
                     IHVPEKDQAVTPETFTFSLNRAKLRLTRRREGHSLLRSNLSGEDPAKLWQYYIQLTEV
                     EQAFKELKGDLAIR"
BASE COUNT          229 a          290 c          290 g          237 t
ORIGIN      
        1 ccggatggct aagtcgcctt tgagctcttt gaaggcttgt tcgacctcgg tcagttggat
       61 gtaatactgc cacagtttag ccgggtcttc tccgctgaga ttggagcgca acagggaatg
      121 cccttcgcgc cggcgagtca ggcggagttt tgccctgttc aaggagaaag tgaaggtctc
      181 gggcgtgacc gcttggtctt tttcaggaac gtggatatcg agcaacgcag aggcacgtcc
      241 tgcctctttc ttggccgcgc cgagcttgag gaggagctca tcgcgggtga gtctttggtg
      301 ttgcaattca tgcagccgtt taagcagctt ttttaaacgt cgccagcgca tcgaacgttc
      361 cttatgggca gggcctgcac ttcgggccaa gatataaagt tcgcccgcct ggtcaagcag
      421 tttcacatcc acggcgtcac ggacctgctc ccaaggtaag cggagaaagg cttgttcgag
      481 cttgtttaat cgccccctcg gggtgcccac caaatagcaa ataggggggt gggcctcgcg
      541 catttgacga agcgtctcct cagtggggat cccgcgatcc atgacccagg tgcgattggc
      601 tttcccgtag cgtgcttcaa tggtcttcag aaaatcaagg agcgtggttt tgtcagaggt
      661 gttgcccggc atgacttcgt aggccagagg aaagccgtcg ggcgtcacga tcaaggcaat
      721 cactacctgt acacaatcga agcgcttgtc acggctataa ccgaattttc tcttgccttc
      781 ctcgggcgga tcgcactcaa aatacgtgct ggtcagatca tagaggagca cgtcaaagcg
      841 ggcctcgaac aaggcttgcc agcgttgccg caaaaagcaa aacaggccct ctttaggggg
      901 caacaacctg tccaagcacc gatatagctt gtcgatctgg accagaccaa aatcctcccc
      961 caagagatcg cctatcgcac tttgttcata ccactgacga tgcagccgcc actcgctgcc
     1021 cggatcgatc agtcgataac acacca
//
LOCUS       DASQSL010001020         1509 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_196179, whole genome shotgun sequence.
ACCESSION   DASQSL010001020 DASQSL010000000
VERSION     DASQSL010001020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196179"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(54..995)
                     /locus_tag="VE844_10495"
     CDS             complement(54..995)
                     /locus_tag="VE844_10495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01761.1"
                     /translation="MKVIADPKLKQFAEEHHLVGLTSPSLRALVTEKAGYSVDKARRF
                     LAFQRRIDNELLRHRIITNNRYTAWFKQGGQTFAQIRAFIVQFSVFSNQFLVAQLNKM
                     INADSLQGMRASKEILANEIGVVFNAGRTAPTSKDLDHQGGDPELVSTEGSVEGGMFR
                     FRAAHFEWLLQIAERLNLGFDEIGKRKHGTPATLHFCDELSRLYGSEDYAISQAASYA
                     VENWAAAGFWQELIEGFSRYNTRTGSGLPLAFFTWHNRLEAQHAQHTQEELEDLYLMG
                     DIDEDAFIQHGNEMLDGVAVFWDGLEQQRLMIAAYEG"
     gene            complement(1072..>1509)
                     /gene="maiA"
                     /locus_tag="VE844_10500"
     CDS             complement(1072..>1509)
                     /gene="maiA"
                     /locus_tag="VE844_10500"
                     /EC_number="5.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016034 - maleylacetoacetate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maleylacetoacetate isomerase"
                     /protein_id="HZC01762.1"
                     /translation="LAIIEYLEEAYPEPPLLPKALKDRAYVRALAAIIACDIHPLNNL
                     RVICYLKEILNQDEKVRLAWIQHWIQEGLEAFEEHLDRTQGRFCFGDRPTLADVCLVP
                     QLYNARRFGCDLNNFPRIQAIDQHCLTLPAFQQAAPENQPDAA"
BASE COUNT          339 a          408 c          410 g          352 t
ORIGIN      
        1 tgtttcctgt gggggatgcc tacgcttaca gcaccccccg gttaactggg gtgctacccc
       61 tcgtatgccg ctatcattaa ccgctgttgc tctagcccat cccagaagac ggccactcca
      121 tccagcatct cattgccatg ctggataaag gcgtcttcgt cgatatcgcc cattaaataa
      181 agatcttcca gttcctcttg ggtgtgctgc gcgtgctgag cctccaggcg gttgtgccag
      241 gtgaagaagg ccaaaggcaa acctgaaccg gtgcgcgtat tgtagcggct gaagccttcg
      301 atcagttctt gccaaaaacc ggctgccgcc cagttttcga cggcatagct cgccgcttgt
      361 gaaatcgcat agtcttcgct cccgtaaagc cggctcaact catcgcaaaa atgcagggtt
      421 gcaggcgtac cgtgcttgcg tttgccgatc tcatcgaagc caaggttgag cctctcagcg
      481 atctgcagca gccattcaaa atgcgcggcc cgaaaccgga acatcccacc ttccacggag
      541 ccttccgtgg ataccaattc agggtctccc ccttggtggt caagatcctt ggaggtaggg
      601 gccgtccgcc cggcgttgaa caccaccccg atctcgttgg ccaagatctc tttggaggcc
      661 cgcatccctt ggagggaatc ggcgttgatc atcttattca actgggcaac gagaaattgg
      721 ttcgaaaaca ccgaaaactg gacgatgaac gcccggatct gcgcaaaggt ctgtcctccc
      781 tgcttaaacc aggcggtata gcgattgttg gtaatgatcc ggtgtcttag aagctcatta
      841 tcgatacgcc gctggaatgc aagaaaacgt cgagccttgt cgaccgaata acccgccttt
      901 tctgtaacca gggccctgag cgagggtgaa gttaaaccta ccaggtgatg ttcctcggca
      961 aattgcttta atttgggatc agcaataacc ttcatgatgg atctcttctt atcgtaaaat
     1021 ggagaaaacg atgttttttg accggtagat gcaagaagaa ttccattgcg cttatgcggc
     1081 gtcaggctga ttctccgggg ctgcctgttg aaaggctgga agtgtcaggc agtgctgatc
     1141 gatggcctgg atccggggaa aattattcag atcgcagcca aaacgccgcg cgttatagag
     1201 ctgcggcacc agacagacat cggccagggt gggtctatcg ccaaagcaaa aacggccctg
     1261 ggtcctgtcg aggtgttctt caaaggcctc gagcccctcc tggatccagt gctggatcca
     1321 ggcgaggcgg accttttcgt cttgattcag gatctccttg aggtaacaga tgacccgaag
     1381 gttatttaag ggatgaatgt cacaggcaat gatcgcggcc agcgcgcgga cataggcccg
     1441 gtctttaaga gccttgggta gcaagggtgg ttccggatat gcctcttcca ggtactcgat
     1501 gatggccaa
//
LOCUS       DASQSL010001021         1603 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_88440, whole genome shotgun sequence.
ACCESSION   DASQSL010001021 DASQSL010000000
VERSION     DASQSL010001021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1603
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88440"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1069..>1603)
                     /locus_tag="VE844_10505"
     CDS             complement(1069..>1603)
                     /locus_tag="VE844_10505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019867592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZC01763.1"
                     /translation="DLGKTHFVEEIASSRTPWRARRIAQVLEELQTGDAMIVAELSRL
                     GRSMLECMEILSIALERGINVYAVKGNWQLDQSIQSKIIAMAFPMAAEIERDLISQRM
                     MEALRAKKAAGMKLGRPKGPGKSRLDAFRPEIEALLANGSTQKFIARRYHTTEANLHN
                     WMKKHGIRKSQSAAPLG"
BASE COUNT          307 a          510 c          389 g          397 t
ORIGIN      
        1 aggtcagtta tgtctttcgt tttactgtta tacctatttc cacggcgtta agtcagttca
       61 ttgaggccat tttatgggct cctctaaaat tatagctccg tggatgaaat ctataactcg
      121 gttgtcgagt agagcacagg cgcgcgcaac gaggctggga gttaccggct gactcgctct
      181 ggcgagcgtg agccgggttc ctagtccagc tatggtccac gtttcctgcg ccccctctaa
      241 aattccgtac ggtgagtttt ccccagtacg gctacaaacc gtgatgtctt tcaatcacta
      301 tgcccctgcc tgtaggccca atggggttaa gcaccgggtc tgcatgcgcc cacttagccc
      361 acagtttggg cataccttcg tcatggttat gccgtcctgc attaacgttg ggtgttatca
      421 acccaacccg ccttcgaccc tcaccacaac caccacggtc cacgggtcct ttgctccacc
      481 agggttatag tgtccctggc ctccacgcta ctacaacccg atccgcagat ctcacaagct
      541 ctgcctgatt tcccagtgtc tctggttata cagcccgtct ttacccgacg acccggtctg
      601 ggttgcctat gagaccgtcc ctgctttggg tcaacactcc ttctctacgt gccgccaccc
      661 atacgccgag aggagaaacg aagaaacccc agccatcctc cgttcccagt ggccttcctc
      721 acaaatttac tgagtcggct cctcttccac cccgacacct gtttctgtcg ggctttgttc
      781 acgacgctgc aatgttcgcg taatgctgcg gcccctagag ttgcttgccc ccctggacag
      841 gtccgaccaa agttttctcc agccgccgag ggcttttaca tccgagcttt cccaagaccg
      901 gtcacccgta tcctgagtca ggtatgacta cacagcgctc ctgggggaga actgtgaccg
      961 gactttcacc ggcaggagtg ccgccgttac aggctgcaca aattccaaca aaggtacgta
     1021 aactctcaca gactcatccg cttgaggtag agctgctgtg ggtcgtctct atccaagagg
     1081 cgctgcactc tgcgactttc ggatgccgtg ctttttcatc cagttatgca ggttggcctc
     1141 ggtagtatga taacgccggg cgataaactt ctgcgtggac ccattggcca gcagcgcctc
     1201 gatttccggg cggaacgcat ccagcctgct tttacctggc cccttgggtc tacctagctt
     1261 catccctgct gctttcttag cgcgtagtgc ttccatcatc cgctgggaga tcagatcccg
     1321 ctcgatctcg gccgccatgg gaaacgccat cgcgatgatc ttactctgga tgctttgatc
     1381 gagctgccaa ttgcccttaa cggcgtagac gttaataccg cgctccaggg cgatcgagag
     1441 tatctccatg cactccagca tgcttcgccc cagccgcgag agttcagcca cgatcatggc
     1501 atcaccggtt tgcaactctt ccaatacctg cgcgatccgg cgcgctcgcc acggcgtgcg
     1561 gctggaggcg atctcctcaa caaaatgcgt cttcccaagg tcg
//
LOCUS       DASQSL010001022         2032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_102915, whole genome shotgun sequence.
ACCESSION   DASQSL010001022 DASQSL010000000
VERSION     DASQSL010001022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2032
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102915"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..234)
                     /locus_tag="VE844_10510"
     CDS             complement(<1..234)
                     /locus_tag="VE844_10510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01764.1"
                     /translation="MSRLAWLASTYISVCLCLGLTACGVELPDQADIPPVKRRQNTKP
                     PSLEALFPKTDEEPYLYDATNRRDPFIPLIAATP"
     gene            complement(255..398)
                     /locus_tag="VE844_10515"
     CDS             complement(255..398)
                     /locus_tag="VE844_10515"
                     /inference="COORDINATES: protein motif:HMM:NF016253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01765.1"
                     /translation="MNVTDIKVTLAKGKGDTPTLSTNCLLTTFRFLEPRETDAKKALK
                     PAR"
     gene            complement(395..859)
                     /gene="pilO"
                     /locus_tag="VE844_10520"
     CDS             complement(395..859)
                     /gene="pilO"
                     /locus_tag="VE844_10520"
                     /inference="COORDINATES: protein motif:HMM:NF016253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA];
                     GO_process: GO:0043683 - type IV pilus assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HZC01766.1"
                     /translation="MKELLEKFEALEPKQRWMLCGLFACLLGGIGYYLYSTHAERLEA
                     LTAEVEETRQTVEKHRAIAMRLHDLQVRLETLDEMLKVAITLLPESREIPELLTQISQ
                     LGMNSGLEFRLFKPEPEKQADFYAEVPVSLSILGRFHELGRFSITYRSYHAS"
     gene            complement(856..1449)
                     /locus_tag="VE844_10525"
     CDS             complement(856..1449)
                     /locus_tag="VE844_10525"
                     /inference="COORDINATES: protein motif:HMM:NF016992.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HZC01767.1"
                     /translation="MIRINLLPIRELQKQAQLRRQLYIFAAIAAVLLIGVGLTWVMDR
                     RALAVLEEEKASFQAELERLKPVITEVSALEQREKLLHARLNTIQRLRGNQRGPVRVF
                     DELSRSLPEQAWLEAIDESAGVYKVAGYALTNFAVADLLRNLQRSSGFTGVDLVSSEQ
                     VVMATQEIKKFIIQFQRVTRTTEETSPPSTARGKPGA"
     gene            complement(1446..>2032)
                     /gene="pilM"
                     /locus_tag="VE844_10530"
     CDS             complement(1446..>2032)
                     /gene="pilM"
                     /locus_tag="VE844_10530"
                     /inference="COORDINATES: protein motif:HMM:NF022554.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pilus assembly protein PilM"
                     /protein_id="HZC01768.1"
                     /translation="NPVVIDVDMLALINGFELNYPEAIHGHVIPLIHLGASMMTVLIL
                     KDGLSAFQRDIPLGGNQYTAALQQALNVGYEEAEGLKLGARPWQASQAEVFAALRSVT
                     EEMVIEIQRSFEFYLASAGDDPIEQVYLSGGCASLAGMSQLLTSRLKLPVELLNPFRH
                     VSIPETRFDADYVLTMGPMAAVAVGLAIRRKGDA"
BASE COUNT          396 a          592 c          607 g          437 t
ORIGIN      
        1 cggggtcgcg gcgatgagcg ggatgaaggg gtcgcggcgg ttggttgcgt catacagata
       61 cggctcttcg tcggtcttgg gaaacagcgc ctccaatgac ggtggcttcg tgttctgacg
      121 acgcttcact gggggaatat ccgcctgatc gggcagctcc acgccacacg cggtcagccc
      181 gagacagaga cagacggaga tgtatgtgga ggcaagccat gcgagccgag acacagaatg
      241 cgattccctc gtcattagcg cgcgggtttc aatgctttct tggcgtccgt ttcccgtggc
      301 tccagaaagc ggaaggtggt taagaggcag ttggtcgaga gcgtcggagt gtctcccttg
      361 cctttggcca gggtgacttt gatgtcggtg acgttcacga tgcgtgataa cttcgatagg
      421 tgatcgaaaa gcgcccaagt tcatgaaagc gccccaggat cgagaggctc accggaacct
      481 ctgcgtaaaa atccgcttgt ttctccggct ccggtttgaa gagccgaaat tccaggccag
      541 aattcatgcc caactgggaa atttgcgtca gtaactccgg gatctcccgc gattccggta
      601 ggagggtgat ggcgaccttg agcatctcat ccagggtctc caggcgcacc tggaggtcat
      661 gaagacgcat ggcgatggcg cggtgtttct ctacggtttg ccgcgtctct tccacctcag
      721 cggtgagggc ttcgaggcgc tccgcatgcg tcgagtacaa gtaataaccg atccccccta
      781 agagacaggc gaagaggccg cagagcatcc aacgttgttt gggctcgagc gcttcgaact
      841 tttccagcaa ctctttcatg ccccgggctt cccccgagcc gtcgacggcg gtgacgtctc
      901 ttcagtggtt ctggtgacgc gttggaattg gatgatgaat ttcttgatct cctgcgtcgc
      961 cattaccacc tgttcggacg agaccagatc gacgccggta aatcccgacg agcgctgtag
     1021 gttccgcaac aggtcggcca cggcgaagtt ggtcagggcg taacccgcca ctttgtagac
     1081 ccccgcactc tcatcgatcg cctctaacca cgcttgttcg ggaaggctcc ggctcaactc
     1141 atcgaagacg cgcaccggcc ctcgctggtt gccgcgtagt cgctggatgg tgttaagccg
     1201 tgcgtggagc aatttttcgc gctgctcgag ggcgctcacc tcggtgataa ccggtttcaa
     1261 gcgctcaagc tcggcttgga aactggcttt ttcctcctcc agcaccgcta gcgctcgcct
     1321 atccatgacc caggtcagcc ccacgccgat caacagtact gccgcaatgg cggcgaagat
     1381 gtagagctgt cggcgcaact gcgcctgttt ttgcaactca cgaatgggca gtaaattgat
     1441 ccgaatcatg catcgccctt ccgccggatg gccaggccca cggccaccgc cgccatcggc
     1501 cccatggtga ggacatagtc ggcgtcgaac ctcgtctcgg ggatgctaac gtgacgaaac
     1561 ggattgagca gctcgacggg gagtttcagg cgcgaggtca gtaactggct catccccgcc
     1621 aggctggcgc atccgccgct gagatacacc tgctcaatgg ggtcgtctcc ggcactggcg
     1681 aggtaaaact caaacgagcg ttggatctcg atcaccatct cctcggtgac gctgcgtaag
     1741 gctgcgaaga cttccgcttg cgatgcctgc caaggacgtg cgcccaattt cagcccttcg
     1801 gcctcttcgt agccgacgtt gagcgcctgt tgcaaagctg ccgtgtattg attgccgccg
     1861 agggggatgt cgcgttggaa ggcgcttaag ccgtccttca ggatcagcac ggtcatcatg
     1921 ctcgcgccga ggtggatgag tggtatgaca tgcccatgta tcgcctcggg gtaattgagc
     1981 tcaaagccgt ttatcagcgc caacatgtcc acatcgatca ccacgggatt ga
//
LOCUS       DASQSL010001023         4942 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_76239, whole genome shotgun sequence.
ACCESSION   DASQSL010001023 DASQSL010000000
VERSION     DASQSL010001023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4942)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4942)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4942
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76239"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            365..2056
                     /locus_tag="VE844_10535"
     CDS             365..2056
                     /locus_tag="VE844_10535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012586206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC01769.1"
                     /translation="MYLRETRQKRADGSLLTHLQIAENVWDPQRKRSRVRIIYSCGRA
                     DDPVVAEGLRRLARSILRRCSPEEIVSEDPSWRVVDTWPYGEVYVLEQLWARLGMAEV
                     IGQIVAERRFDFPLERALFAMVANRACAPSSKLYCYEQWLREEVRIAGTEGLELQHLY
                     RAMDLLEASKEVVEKALYFRLADLLNLDVELIFYDTTSVHFEIDEEDQGSGEGDEVGG
                     NVGSGAKTYRAPRKRGKSKSGRDDAPQIVVGLAVTRDGFPVRHWVFPGNTVDVTTVAK
                     VKAELKDWRLGRCVFVGDAGMVSEKNLKALSASGGRYIVCMPIHLGGEVDRAVLSRPG
                     RYQEVTENLRVKEVVIGEGERRRRYIVCHNPQEEARQRAHRERVLATLEVELESLRHQ
                     EGEAHSKRLCALRASRSSGRYLKLTPTGNPLIDQAKIKAAERLDGKFVVHSNDDTLSA
                     EDMALGYKQLQRVEEAWRMLKSGLRLRPIFHWAVHRIHAHVALTVLALLLERMAEQAC
                     ADTWRNIRDDLKRIKLAQLLSPNGTLWQVTEPPPEALKRLKSLHIKNPPPLLQIT"
     gene            complement(2131..2754)
                     /locus_tag="VE844_10540"
     CDS             complement(2131..2754)
                     /locus_tag="VE844_10540"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC01770.1"
                     /translation="MRARGQQILDGPSAEAVKGDPKKKACYDPKQKSERVQQERAAYR
                     EELPTLKAEETLALDEMGAATNLTPLYGRSLLGERVYGAKPTAPGKRISTVGASGLSG
                     LKTAMCFEGTLTGAVFLQFLDEFLVPVLKPGQIVILDNAKAHKVAGVRERIEGAGARV
                     LYLPPYSPDLNPIEMAWSKVKQFLRKAQARTVEALYEAIAQPDFDSR"
     gene            3169..4806
                     /locus_tag="VE844_10545"
     CDS             3169..4806
                     /locus_tag="VE844_10545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013032190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC01771.1"
                     /translation="MAVHIETGSMVAPGYKSCTLAHLGLVAGMYEELGIGEVIDRAVP
                     QDEERRFVSVGQALKAMVLNGLGFVNQRLYLIPHFFQDKPTERLLGAGISPEHLNDDV
                     TGRALDRLHEQDVTSVYALVSREAVKRLGLRPRCGHLDSTSFHVDGQYNSEHEPEAGV
                     IHITPGYSRDHRPDLNQVVVQLIADNQAGIPLWMEPLSGNSSDKTSFRATVKAHVGQL
                     KRDYQLEYLVADSALYTAETLPTLNELCWITRVPETLKEARQAIEVAAPVLMEALDKM
                     SYQCLESAYAGVRQRWIVVYSPEAYQRAIKRVDRHCLKQSTAELKAFEVLCRREFACR
                     VDAEQALAEFKKTQTLTTVASSGIEEIPHYPGRGRPGKGQKPTFTYRITGTVASLPAS
                     RLRKLQQQSCFLLATNQLDTQALSDEELIAAYKDQQKVERGFRFLKDPLFLASSLYLK
                     SPKRIMALMMVMTLCLLVYAALEYRLRQALKEQQQTFPNQKGQPVQNPTMRWLFQLFV
                     GIHLLVIQTGQILVLNLKEHHQQVLRLLGPPYEALYS"
BASE COUNT         1052 a         1412 c         1428 g         1050 t
ORIGIN      
        1 aggttggagc cagtttcggg catagtgttt tcctcctccg tttttcggca ttgcgaccgt
       61 acctgatgaa cgcggacagt ttatttgctc tctacactac cgttgaccag gctttcatca
      121 tccatctttc catgatgttc aaggcttgat ggcgaccttc atcacaccgt cgcggcgttc
      181 gccgaaaagc tcatacccga ctttgacagt tccgcagaca tagtacagtg ttctgaggag
      241 ggcaagagtc gaacgatcaa gaggttagag tgaacaagcc tagatatttg gcggtaaatg
      301 catagataca tgcaattgta attatccatt gataggcaag cacatggtgc gtataatgac
      361 gcacatgtat ttgcgtgaaa cacgccagaa gcgcgccgat ggctccctgc tcacccatct
      421 gcagatcgcc gagaacgtct gggaccccca aaggaagcgc tcccgggtga gaatcatcta
      481 cagctgcggc cgggccgatg acccggtcgt ggccgaaggg ctgcgtcgtc tggctcgcag
      541 catcttgcgc cgctgctcgc ctgaggagat tgtaagcgaa gacccttcat ggcgtgtggt
      601 cgatacctgg ccctatgggg aggtctatgt gctcgagcag ctctgggcgc ggctggggat
      661 ggcggaggtc atcgggcaaa tcgtggcgga gcggaggttt gacttccccc tcgagcgggc
      721 cttgtttgcg atggtggcca accgggcgtg tgcgccctcc tcgaagctct actgctacga
      781 gcagtggctt agggaggagg tgcgcattgc gggcaccgag gggctcgagc tgcaacacct
      841 ctaccgggcg atggatcttt tggaggcgag caaggaggtg gttgaaaagg cactctactt
      901 tcgcctcgcc gacctactca atctcgatgt ggagctcatt ttctacgaca ccacctcggt
      961 tcacttcgag atcgacgaag aggatcaagg cagcggtgag ggcgatgagg tagggggcaa
     1021 tgtcgggtcg ggagcaaaga cctatcgcgc cccaaggaag cgtggcaagt cgaagagtgg
     1081 tcgggacgac gccccgcaaa ttgtggtggg gctcgcggtc actcgggatg ggtttccggt
     1141 gcgccactgg gtgtttccgg gcaacacggt ggatgtgacc acggtcgcga aagtcaaggc
     1201 cgaactcaag gattggcgct tgggtcgctg tgtgttcgtc ggggatgcgg ggatggtctc
     1261 tgagaagaat ctcaaggcgt tgagcgcgag tgggggccgc tacatcgtgt gcatgcctat
     1321 ccacctcggc ggggaggtcg accgggcggt cttgagccgc cctggacgct atcaggaggt
     1381 caccgagaac ctgcgcgtca aggaagtcgt gatcggcgag ggcgagcggc gtcggcgcta
     1441 tatcgtctgc cacaaccctc aggaggaggc gcgccaacgc gcccatcgcg agcgcgtgct
     1501 cgccacgctc gaagtggagc tcgagagcct ccgtcatcaa gagggcgaag cgcacagcaa
     1561 gcgtctgtgc gcgctacggg cgagcagaag ctcagggcgc tacctcaagc tcacccccac
     1621 cggcaacccc ctcatcgacc aggccaaaat caaggccgcc gagcgcttgg acggcaagtt
     1681 cgtcgtgcac agcaacgacg acaccctcag cgccgaggac atggcgctgg gctacaagca
     1741 gctgcagcgg gtggaggagg cctggcgtat gctcaagagc ggcctgcgtc tacgcccgat
     1801 cttccactgg gcagtccatc gtatccatgc ccacgtcgcg ctcaccgtgc tcgccctctt
     1861 actcgagcgc atggccgagc aggcctgcgc cgacacctgg cgtaacatcc gcgatgacct
     1921 caagcgtata aagctcgcgc aattgttgag ccccaacggt accctctggc aggtcaccga
     1981 acccccgcca gaggcactca agcgcttgaa atccctacac atcaagaatc ccccaccgct
     2041 ccttcagatc acttgacgac ctagatacac ggccctttct cgggccgcac ctaatctctt
     2101 gatctgccaa attaaatcgg gatcttgtat ctagcggctg tcaaagtcgg gctgagcgat
     2161 cgcctcataa agtgcctcca cggtgcgcgc ttgggctttg cgcaggaact gcttaacttt
     2221 ggaccaagcc atttcgatgg gattcaaatc cggtgaatac gggggcagat aaagcacgcg
     2281 cgcacccgct ccttcaatcc gttcacgcac gccggccacc ttgtgggctt tggcattatc
     2341 cagaatcacg atctggccag gcttgagcac cggcaccaga aactcgtcca ggaactgcaa
     2401 aaacaccgcc ccggtcaggg tgccctcaaa gcacatcgcg gtctttaagc cgctgagccc
     2461 tgacgcaccg actgtgctga tgcgcttccc cggcgccgtg ggcttggccc catacactcg
     2521 ctcccccagc agcgaacgcc catacagagg cgtgagattc gtagccgccc ccatctcatc
     2581 cagagcgagg gtttcctccg cctttaaggt cggtaattcc tcacgatagg ccgcccgctc
     2641 ttgttggaca cgctcgctct tttgctttgg gtcgtagcag gccttttttt tcgggtcacc
     2701 tttaaccgcc tcagcgctcg gtccatcgag gatttgctga ccgcgcgccc gaatctcccc
     2761 tcataccgct cacctaactc agtgagcgtt aactccggcg cctcggccag cactccacgg
     2821 atgaattccc cacccccctc atccacaatc gggccatgcc cccctccatg cggcttggga
     2881 gccaatgtgc ccgcttcttt ataccgctgc ttgagccggt agacaaagta ttccgaaacc
     2941 cgaaatcgct tcgccgtctt cctcatcgat tcctgctcca gattctctat gacccgctcc
     3001 cgtatatcta tcgagtaggc tctcatggac tctaacccct tctcaaattc tagtatcttg
     3061 tccgctcttc aagataccct aaaactacat agtaatcgag cgggaaccgc tatactgcct
     3121 gtcttgcaaa ctagatcgcg gtgttgacta aaccagcgga gaagtgtgat ggcggttcat
     3181 attgaaacgg ggagcatggt ggcgccgggg tataaaagct gtaccctggc ccatttaggg
     3241 ttagtggcgg gcatgtatga ggagttaggg ataggcgaag tgattgaccg ggcggtcccg
     3301 caggatgagg aaaggcgttt tgtatctgtg ggccaggcgc tcaaagcgat ggtgctcaat
     3361 ggcttgggct ttgttaatca acggctctat ctgataccgc attttttcca ggacaaaccc
     3421 acggaacggc tgcttggggc gggcattagc cctgagcatc tcaatgacga tgtgacgggg
     3481 cgggccttgg ataggctgca tgagcaggat gtcacgagtg tgtatgcctt agtctcgagg
     3541 gaggcggtca agcgattggg gttaaggcct cggtgtggcc atttagatag cacgagcttt
     3601 catgtggatg gccagtacaa tagcgaacac gagccggagg cgggggtcat tcacattacg
     3661 ccaggataca gccgcgacca tcggcctgat ctgaaccagg tggtagtgca gttgatcgcg
     3721 gataaccagg cgggtattcc tttatggatg gagcccttaa gtggcaatag cagcgataag
     3781 accagttttc gggcgacggt gaaagcccat gtggggcaac tgaagagaga ttatcagttg
     3841 gaatacctcg tcgccgacag tgctctgtat acggcggaga ccttgccaac cctcaatgag
     3901 ctctgctgga tcacgcgggt gccggagacc ctgaaggagg cacgtcaggc gattgaggtg
     3961 gcggcgccgg tgttgatgga agcgctagac aagatgagct atcaatgcct ggaatcggcc
     4021 tacgccgggg taagacaacg ctggatcgtg gtgtactctc ctgaggcgta ccaacgcgcc
     4081 ataaaacgcg tggaccggca ctgcctcaag caaagcaccg cggagctcaa ggccttcgag
     4141 gtgctgtgcc gcagggagtt tgcctgcaga gtggatgccg agcaggcctt agcggagttt
     4201 aagaaaaccc agactctcac cacggtagct tcctccggga ttgaggaaat ccctcattac
     4261 ccagggcggg gtcggcctgg caaagggcaa aagcccacgt tcacttaccg gataacaggc
     4321 acagtggcca gtctaccggc atcccgtctg cggaaactgc aacagcaaag ctgctttctt
     4381 ctggccacca atcaattgga tactcaggct ttatcagatg aggagttgat tgcggcctac
     4441 aaggaccaac aaaaagtgga acggggcttt cgcttcctca aagacccgct gttcctggcc
     4501 tcttccctgt atctgaagtc gcccaaacgt atcatggcgt tgatgatggt catgaccctc
     4561 tgtctgttgg tctatgccgc cttggaatac cgcctccgtc aggccctcaa agagcagcag
     4621 caaacctttc ccaaccagaa aggtcagccc gtgcaaaacc ccaccatgcg ctggcttttt
     4681 caactgtttg taggcattca tctgctcgtt atccaaacag gccagatact cgtgcttaat
     4741 ttgaaagagc atcaccaaca ggtattgcgc ttattgggac ccccttatga ggcactttat
     4801 tcttaaatct aggggtgggt atgcggaatg tcggcactag catcacgacc tgccggttct
     4861 cagcatgctt tttcactaga aactcataga gcctatgcat gactgtaagc cgttcctcgg
     4921 ttgcgtttgc tggaatactg ag
//
LOCUS       DASQSL010001024         1412 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_76245, whole genome shotgun sequence.
ACCESSION   DASQSL010001024 DASQSL010000000
VERSION     DASQSL010001024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1412
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76245"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(351..1112)
                     /locus_tag="VE844_10550"
     CDS             complement(351..1112)
                     /locus_tag="VE844_10550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005438063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC01772.1"
                     /translation="MYYTTGLSREQITDLCAAIHREVTGGKNAAWPPILGLFKSVVVA
                     LTYLRRNRVQHELAETYDVSQSTISRAITAITPLLGQVLTVYVPTADELDPHTHYVID
                     GTLLPCWSWAARPTLYSGKHKTTGMNVQLAATLTGHLAWISDPIEGHHHDTYCLADSA
                     ALAEVDPRNWIGDKGYVGNDMLTPIKKPTYRDLLDWEKEFNTQINKIRYIIEQVIANF
                     KTWRIMHTDYRRPLKTFAQTISTVIALHFYKLACE"
BASE COUNT          282 a          373 c          429 g          328 t
ORIGIN      
        1 tcccactgaa ctcaccctcg ccacctgatc acaccacccc accgaggctg agtccgccta
       61 cacctcggcc cacgcgacgg cgcccctcac gcttcagccg atcgatgaag acgaacaggt
      121 caagacggag cgctaagtag cgtagtcgat cttgacgttg tccactgtca cgtgaaatac
      181 tcccgcgccg aaggagtaca gtgagaattc aagactccca atagggccgt cctctaatcc
      241 cgccttaact tccggaaatt tctctatctg aaaagaccaa ccggtgtcag attgatggat
      301 gagcacattg tactgctttc ttgagctgga gtcgacttct tcctggaaga ttattcacaa
      361 gcaagtttat agaagtggag tgcgatgacg gttgagatgg tttgggcgaa ggttttcagg
      421 gggcgccggt agtcggtgtg catgattctc caggtcttga agttcgcgat gacctgttcg
      481 atgatgtagc ggattttgtt gatctgcgtg ttgaactctt tctcccagtc gagaaggtcg
      541 cggtaggtgg gtttcttgat cggtgtgagc atgtcgttgc cgacgtagcc tttgtcacct
      601 atccagtttc ttggatcgac ttcggccagg gctgcggagt ccgcgaggca gtaggtgtcg
      661 tggtggtggc cctcgatcgg gtcggagatc caggcgaggt gtccggtcaa agtggcggcg
      721 agttgaacgt tcatgccggt ggttttgtgc ttgccggagt acagggtcgg gcgggcggcc
      781 catgaccagc acggaagcag cgtgccgtcg atgacgtagt gggtatgcgg gtcaagctcg
      841 tctgccgtgg gcacgtacac ggtgagcacc tgacccaaca ggggtgtgat cgcggtgatc
      901 gctcgactga tcgtcgactg ggacacgtcg tatgtttccg ccaactcgtg ctggactcgg
      961 ttccgtcgta aataggtgag cgctacgacc acggacttga ataagccgag gatcggcggc
     1021 cacgccgcat tctttccgcc ggttacttca cggtggatcg ccgcgcacag atccgtgatc
     1081 tgttcccgtg acaagccggt ggtatagtac acggttgacg gtccgtttct tttcgagaac
     1141 tgtgtgtggt agctcaattc tcgagcaaaa cgggccgtcc ttcatgtcaa cacgccgcga
     1201 agcggacaca aataaacctg ctgaataagc ctccttgtta tgtgtgggtg gcaaagacgc
     1261 cagcagggag tcggctgcga cggtagtctc ccggtgacgc aaggccgtgt atgtcgatac
     1321 agtcatgctt cccagtctgc ttgcactgaa aaacacagtc cacggccgct ctgatcgtgg
     1381 cgggcgaaat cgaacgtggt cagcgcgcgg tc
//
LOCUS       DASQSL010001025         6961 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_129128, whole genome shotgun sequence.
ACCESSION   DASQSL010001025 DASQSL010000000
VERSION     DASQSL010001025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 6961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6961
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129128"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1172
                     /locus_tag="VE844_10555"
     CDS             <1..1172
                     /locus_tag="VE844_10555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018718664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HZC01773.1"
                     /translation="DVVYIEETAQGTWRLSQIPHVEGALVSLDPNDGAVLALVGGFDF
                     ARSKFNRATQSKRQPGSSFKPFIYSAALESGFAATSLINDAPVVFDMPGLGGIWRPQN
                     ATHKYYGPTYLRDALAFSRNLVSIRLLQAVGINQAIRHAAKFGFGVEQLPPNLSLALG
                     TGSVTPLELAVGYAVLANGGYHVEPYFVSRIEMHDGRIIMQHEPAKVCRACEEAEPEQ
                     LEAIDTEMTKPAGGGNYAKRVVSAQNIWAMQSMMQDVIRRGTGKAALVLGRTDLAGKT
                     GTTNDHHDAWFSGFNTRLVTTTWVGFDDNRSLGRGETGGRAALPMWIDFMKVALKGMP
                     KSILPKPPKDVMIAANPRSIMDGLDIGSLSERPGADEPPANSTGDRGGRITEQLF"
     gene            1184..1828
                     /locus_tag="VE844_10560"
     CDS             1184..1828
                     /locus_tag="VE844_10560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01774.1"
                     /translation="MRRRYTASQARLCVAELAARLIAEEGISSYQLAKQKAAERLGMK
                     GRQHLPDNREIEAVLAQYQRLFQGQTQTQHLQTRRRTALAAMRFLSPFSPRLVGPVLS
                     GTACEYTSVTLHVFTDTLEDIALILSEHGIPYKLEERRLRQNATTLMRYPCYRFIAGE
                     VPVELVVFSLKEIHHPPLSPVDGKPMRRADRLTLEGMMDESSVIPPAGVYPSSF"
     gene            1838..3856
                     /locus_tag="VE844_10565"
     CDS             1838..3856
                     /locus_tag="VE844_10565"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020565564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0032508 - DNA duplex unwinding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HZC01775.1"
                     /translation="MTATRGLILRIALPAPLRQSFDYLPLPGYSREQFKPGIRLRVPF
                     GKTARIGLLLKVAAESPVASNQLRPILEVLDQQPLFPLEHLSLLEWVSSYYHHPIGEV
                     VFASLPSLLRHGQPLRRGKEIRPSGGWASTRLGTVPALNPAQTTTVAAIGSSLEGFQT
                     FLLDGVTGSGKTEVYLQSIETVVAAGKQALVLIPEIGLTPQTIARFRERFDVPLAVFH
                     SALTERERLQAWLMARDGMAAIVIGTRSAVWTPLRSPGLVIVDEEHDLSYKQQEGFRY
                     SARDVAIVRAQRAKVPVILGSATPSLESLHNARIGRYQYLYLPERAGSAKIPALEMLD
                     LRGLPMHGGLSEPLLERISAHLARKEQILLFLNRRGYAPLVLCHQCGWMAQCDRCDAK
                     LAHHQAARLLRCHHCGAEHPLKTRCPHCGGQELLKIGYGTERIVETLNRFFANASIVR
                     IDRDSTRRKGVLQRLLDNIQAGEADILVGTQMLAKGHHFPKVTLVAIVDADSRLYGID
                     FRSSERLAQQVIQVAGRAGRADAPGTVIIQTHHPSHPLLAALATHSYTTLADSVLRER
                     KQAQWPPFRSLALLRAEAPSQAEPICFLEEAKHTALSVHTPGITIYGPVPAPMERRAG
                     RYRAQLLLQSRARRTLQHMLSAWIPSLEHLKTARKVRWSLDVDPQEML"
     gene            3896..4300
                     /locus_tag="VE844_10570"
     CDS             3896..4300
                     /locus_tag="VE844_10570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008290073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein"
                     /protein_id="HZC01776.1"
                     /translation="MKETTEQQALRIDKWLWAARFFKTRALAAQAVKGGKVEVNGQRA
                     KPAKTVRINDELRIRRDPYEYIVTVLGLTPKRGPASQAATLYQEFAESIQRREALSLE
                     FKAQAAAGPQFTSRPSKRDRRRIVRFTGKRGI"
     gene            4430..4831
                     /locus_tag="VE844_10575"
     CDS             4430..4831
                     /locus_tag="VE844_10575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020158748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper family protein"
                     /protein_id="HZC01777.1"
                     /translation="MFKKSIIGLISSSLVFALSGCASQSAWTPNVDLYGDPHPERLTA
                     DVAECKQVALQASGGTADQATQGALVGGLIGAAAGAAIGAAVGDPGKGAAIGAAAGGV
                     GSGARQGYGAEETYRRAYSNCLRNRGHRVVN"
     gene            4864..5634
                     /locus_tag="VE844_10580"
     CDS             4864..5634
                     /locus_tag="VE844_10580"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HZC01778.1"
                     /translation="MDPSPRLKSKTAVITGASTGIGRAIARLFGKQGARIIINYQRSH
                     KAAQQLVAEINAEGGHAQAFQADISRPEGIDGLVNAALEAFGRIDIWANIAGADILTG
                     NGARLSDVEKLNRLMEVDLRGTILCCWRVAPLMKEAGGGVILNMSWDLALQGMEGRNP
                     EMFAAVKAGILGFSKCLARSYAPEVRVNELAPGWIETVFAKEKMKPEAYQAVVERTPL
                     KRFGMPEDVAWAALYLASDEAAFITGQTLRINGGLISS"
     gene            complement(5629..6441)
                     /locus_tag="VE844_10585"
     CDS             complement(5629..6441)
                     /locus_tag="VE844_10585"
                     /inference="COORDINATES: protein motif:HMM:NF017551.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NRDE family protein"
                     /protein_id="HZC01779.1"
                     /translation="MCLILFSYKTHPHYPLVLAANRDEFYARPTATANFWKDAPSILA
                     GRDLRGGGTWLGVDRHGRFAAVSNYREPGSNKSHRLSRGLLVSDFLQGQQTPKEYMHQ
                     LHRRGQQYNGFNLLVGDRSEIGYYSNRAHAAQSLEPGLYGISNHLLDTPWPKVKRGKE
                     QLGDRLARNRTLTAEAIFAILSDRMLANDDELPDTGVGIEVERIVSPIFITSPYYGTR
                     SSTVLLIDKDECLSFSERSFESASNRAQTVYYRFRIEAEPENRQAIALSPGL"
     gene            complement(6452..>6961)
                     /gene="sodC"
                     /locus_tag="VE844_10590"
     CDS             complement(6452..>6961)
                     /gene="sodC"
                     /locus_tag="VE844_10590"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005004654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Cu-Zn] SodC"
                     /protein_id="HZC01780.1"
                     /translation="TAAVFVLSVASVSADAEELIVHMQRIDSAGAGKAIGTITVSSSR
                     YGTLFTPELNELTPGLHGFHVHQNPSCEPGEQEGSPVPGLAAGGHYDPAGSGKHEGPY
                     GNGHLGDLPALYVNENGQATQPVLAPRLKIADIKARSLMLHAGGDNYSDHPEKLGGGG
                     ARIACGVVK"
BASE COUNT         1492 a         1914 c         2021 g         1534 t
ORIGIN      
        1 gggatgtagt atatatcgag gagacggccc agggaacctg gcggctctcg cagatcccgc
       61 acgttgaagg cgcgctggta tccctcgatc cgaatgacgg tgcagtactt gcgctggtcg
      121 gtggatttga ttttgcccgc agcaagttta atcgagccac ccagagcaag cggcaaccgg
      181 gttcgagttt caaacccttt atctactcgg ccgcgttgga gtcgggtttt gcggctacaa
      241 gcctgatcaa tgatgctcct gtggtattcg atatgccggg tcttgggggt atctggcgtc
      301 ctcaaaatgc cactcacaaa tactacggcc cgacctacct gcgggatgcc ctggcttttt
      361 cccgcaatct cgtgtccatc cggctgctgc aagcagtggg catcaaccaa gccatccgtc
      421 atgcggcaaa gttcggtttc ggtgttgagc aattgccgcc taacttatcc ttagcgctcg
      481 gtacgggttc agtcactccg ctcgagctgg ccgtgggata tgccgtcttg gccaatggcg
      541 gttatcacgt ggaaccctat tttgtctccc gcatcgagat gcatgatggg cggattatca
      601 tgcaacatga gccggcaaag gtctgtcgcg cgtgtgagga agcagagccg gagcaactgg
      661 aggcaatcga tacagagatg acaaaaccgg ctggtggtgg aaactatgca aaacgcgttg
      721 tcagtgccca aaacatctgg gctatgcagt ccatgatgca ggatgttatc cgccgaggta
      781 cagggaaggc agccctggta ttgggccgga cggatctggc cggcaaaacg gggactacga
      841 acgatcacca tgatgcctgg ttttcggggt ttaacacccg gctcgttacc acgacctggg
      901 tgggtttcga tgacaaccgc tcgcttgggc ggggtgagac gggggggcgg gcggctttac
      961 cgatgtggat tgattttatg aaggttgcgc ttaaagggat gcctaaatca atcctgccga
     1021 agccacccaa agacgtgatg atcgccgcta atccccgctc cataatggat gggctcgata
     1081 tcggttcgct ctctgagaga ccaggggctg acgagcctcc ggcgaacagt accggcgata
     1141 ggggtgggag gatcactgag cagctgtttt gagggggaca actatgcgcc ggcgatatac
     1201 tgcttcccag gcacggttat gcgttgctga gcttgcggca cgattaattg cggaagaggg
     1261 tatcagcagt taccagttag ctaaacaaaa ggctgccgag cgtcttggca tgaagggacg
     1321 gcagcatctg cccgataatc gtgaaataga ggcggttttg gctcaatatc agcggctttt
     1381 tcagggacag actcaaacgc aacacctgca gacaagacgc agaacggcgc ttgccgcgat
     1441 gcgctttttg agcccttttt ccccacgcct cgtcggacct gtcctaagtg gcacggcctg
     1501 tgagtatacc agcgtcacgc tccatgtatt taccgatacc ctggaagata tagccctcat
     1561 cttgtccgaa cacggtattc cttataagct cgaggagcgg cgcctgcgcc agaatgccac
     1621 aaccctcatg cgttatccct gttataggtt catagcgggc gaggtgcccg tcgagcttgt
     1681 ggtattctct ctcaaggaga tccatcatcc tccattaagt cctgtggatg gcaaacctat
     1741 gcgccgcgcc gatcggctca cgctcgaggg gatgatggat gaatcctcgg tgatacctcc
     1801 agcgggagtt tatccttcct ccttttagtt ccgtaagatg accgccacgc gaggtcttat
     1861 cttgcggata gcgctccctg cccctttgcg ccaaagcttc gattatttgc cgttgccagg
     1921 ttactcgaga gagcagttta agcctgggat ccgtctgcgg gtcccctttg gcaagactgc
     1981 ccggatcggg ctactgctga aagtagccgc agagagcccg gtggcatcta atcaacttcg
     2041 ccccatcctc gaggtccttg atcaacaacc cctcttcccc ttagagcatc tatctttatt
     2101 ggaatgggtg agcagttatt atcaccaccc gatcggtgag gtcgtatttg ccagccttcc
     2161 aagcctattg cgccatggcc aaccgctgcg ccggggtaag gagatccgac cttcaggggg
     2221 gtgggcttcc acaaggctcg gtactgtgcc agcattgaat cctgcccaga ccactaccgt
     2281 cgctgcgatt ggctcttccc ttgagggctt tcagacattc ctgctcgacg gtgtcaccgg
     2341 gagtggcaag accgaggtct atctacagag tatcgagacc gtggtagcag cgggtaaaca
     2401 ggccctggta ttgataccgg agattggctt gacgccccag accattgccc gctttcgcga
     2461 gcgcttcgat gtgccgctgg cggtgttcca ttcagcgctg accgagcgag agcgattgca
     2521 ggcatggtta atggcacgcg atggaatggc ggccattgtt atcggcaccc gctctgcggt
     2581 atggacgcct ttacgaagcc ccggtcttgt tatcgttgac gaagaacatg atctatccta
     2641 caaacaacaa gaggggttcc gctattcagc cagggatgta gccatcgttc gggcgcaacg
     2701 ggccaaagta ccggtgatac tgggcagcgc caccccttcc ctggaatcac tgcataacgc
     2761 ccgtatcggc cgttatcaat acctgtatct gcctgaacgg gcaggctcgg caaagatccc
     2821 tgcgcttgag atgttggatc tgcgcggcct gcccatgcat ggaggactgt ccgagccgtt
     2881 gcttgagagg atctcggcgc atcttgcgcg taaagagcag atcctgttgt ttttgaaccg
     2941 acggggttat gcccccttgg tcctttgtca ccagtgtggc tggatggctc aatgtgatcg
     3001 gtgcgatgcc aagctcgccc atcatcaggc agcgagatta ttgcggtgcc atcattgcgg
     3061 tgccgagcac ccgctcaaga cacgctgccc tcattgtggc ggccaggagt tgctgaagat
     3121 tggctatggc actgaacgga tcgtggaaac gctcaatcgt ttctttgcca atgccagcat
     3181 tgtacgtatc gaccgcgaca gcacgcgccg caaaggggtg ttgcaacgct tattggataa
     3241 catccaggcc ggcgaggctg acatcttggt cggcacgcag atgttagcta aaggtcatca
     3301 ctttcctaaa gtcacgttgg tggcgatcgt ggatgccgat agccggcttt atggcatcga
     3361 tttccggtcc agcgaacgcc tggcgcagca ggtgatccag gtcgccgggc gggctgggcg
     3421 cgccgacgct ccggggacgg tgattattca gacccatcat ccgagtcacc cgctattagc
     3481 cgctctcgca actcacagtt acacaacctt ggctgactct gtgcttaggg aacgaaagca
     3541 agcccagtgg cctcccttca gatccttggc cttgttgcgt gccgaagctc caagtcaagc
     3601 cgagcctatc tgttttctcg aggaggcgaa gcataccgct ctttcagtgc atacgccggg
     3661 gataacgatc tatggacctg tacccgcacc gatggagcgc cgggcgggtc gttaccgcgc
     3721 ccagctgtta ttgcagagcc gggcccgccg gacattacag cacatgctga gcgcctggat
     3781 cccgtcgttg gaacatttga agacagcacg gaaggtacgc tggtcgttgg atgtagatcc
     3841 tcaggagatg ctttgagggc atgagctcgc tttttataaa gtattagaga ttaccatgaa
     3901 agagactacc gaacagcaag cgctgcgtat agataaatgg ctctgggcag cacgcttttt
     3961 caagacacgt gcactggccg cacaggcggt gaaaggaggc aaagtggagg tcaacggcca
     4021 gcgggccaag cccgcaaaga cggtgcggat aaacgatgaa ttgcgcataa gacgggatcc
     4081 ctatgagtac atcgtcactg tgctaggcct tacccccaag cgcggaccgg cttcccaagc
     4141 ggccaccctt taccaggagt ttgcggagag catccagcgt cgagaagccc tatccttaga
     4201 attcaaggcc caggcagcgg ccggtcccca attcacaagc cggcccagca aacgcgatcg
     4261 gcgtcggatc gtacgcttta ctggaaaacg tgggatttag agtaaggcat ccgcaggact
     4321 tctatagctc ccttaaaaca ggcatagata atgctgtaca acgcaacgaa taatgacacg
     4381 caagagtcca ataagtagtc taataatcta cctttaaaaa ggagcaatta tgttcaaaaa
     4441 atcgattata ggccttatct cctcatcctt ggtgtttgca ctttccggct gtgcgtcaca
     4501 aagcgcctgg accccaaatg tcgatctgta tggtgatcct cacccagagc gactcacggc
     4561 cgatgtggcg gagtgcaaac aggtggcgct ccaagcctcc ggtgggacgg cagatcaggc
     4621 tactcaaggc gcattggttg gaggtctgat cggggcagcg gcgggggcag ctatcggcgc
     4681 ggcggtgggc gaccccggga aaggtgccgc cattggtgca gcggcaggcg gcgtaggcag
     4741 tggagcacgg cagggatacg gcgcagaaga aacctatcgc cgggcttata gcaattgctt
     4801 gcgcaaccgg ggacatcggg tcgttaactg agcctgactt caaggcctta agtgtgattg
     4861 atcatggacc cgagcccgcg gcttaaaagc aaaaccgcgg tgatcaccgg cgcaagcacg
     4921 gggatcgggc gagcgatcgc ccggttgttt ggcaagcagg gtgctcggat catcatcaat
     4981 taccagcgat cccacaaagc agctcaacaa ctggtggcag agatcaatgc cgagggtggc
     5041 catgcccaag ccttccaggc agatatctct cgccctgaag ggatcgatgg tttggtcaat
     5101 gcggcacttg aggcctttgg ccgcattgac atctgggcca atatcgcagg ggcggatatc
     5161 ctcaccggca acggtgcgag gctcagcgac gtggagaaac tgaatcgcct gatggaagtg
     5221 gatctgaggg gcactattct ttgctgctgg cgcgttgctc cgctgatgaa agaagcaggc
     5281 gggggggtga ttctcaatat gtcgtgggat ttggctctgc agggcatgga ggggcgtaac
     5341 cccgagatgt tcgccgcagt gaaggctggg atcctgggct ttagcaagtg tctggcgcga
     5401 tcctacgcac ccgaggtgcg tgtcaatgaa ttggcccccg gctggataga gacggttttc
     5461 gccaaggaga agatgaaacc cgaggcatat caggccgtag ttgagcgtac cccgctcaag
     5521 cgctttggga tgcccgagga tgtcgcctgg gcggcgcttt atctcgcctc tgacgaagcg
     5581 gcgttcatca ccgggcagac cttgcgcatc aacggcggtt taatctcctc ataatcccgg
     5641 cgaaagggct attgcctgcc tattctcggg ttcagcctcg atcctgaagc ggtaataaac
     5701 cgtctgagct cgatttgatg cggactcaaa actgcgctcg ctaaagctga gacactcatc
     5761 tttgtcaatc aagagcaccg tcgaagaccg ggtgccatag tagggactgg tgatgaagat
     5821 cggtgacact atccgctcca cctcgatccc taccccggtg tccggcaact cgtcatcgtt
     5881 tgcaagcatg cgatcgctca aaatcgcgaa gatcgcctcg gcagttaagg tcctattccg
     5941 ggccagccga tcgccgagtt gctcttttcc ccgcttcacc ttgggccaag gcgtatcgag
     6001 tagatgattg cttatcccat ataagccggg ttcaaggctc tgggctgcgt gggcacggtt
     6061 ggagtaatac ccgatctcgg agcgatcccc aacgagcaga ttaaatccat tgtactgttg
     6121 ccctcgccgg tgcagctgat gcatatattc cttcggtgtc tgttgtccct gcaggaaatc
     6181 actcaccaga agccctcggg aaagcctgtg gctcttattc gatcctggct cacggtaatt
     6241 gctgacagct gcaaaacgtc catgtcgatc tactccgagc cacgttccgc cgcctctcag
     6301 atcccggcct gccagaatag agggagcatc tttccagaaa ttggctgtcg ctgtaggacg
     6361 cgcgtaaaat tcgtcccgat tggcggcaag caccagaggg tagtgcggat gcgttttata
     6421 agagaatagg atcaggcaca tccaaggaac actatttcac caccccgcag gcgatccggg
     6481 cgccgccccc gcccagcttc tcgggatgat cggagtagtt gtcgcccccc gcatgaagca
     6541 tcaaggatcg agctttaatg tcggctattt tcaggcgggg tgcgaggacc ggctgcgtcg
     6601 cttgcccatt ttcgttgaca tataaagcgg gtaagtcacc caggtgaccg tttccatagg
     6661 gtccttcgtg cttgccgctg ccagccgggt catagtggcc ccccgcggcc aatccaggca
     6721 cagggctccc ttcctgctca ccaggttcac agctcgggtt ttggtggacg tgaaaaccat
     6781 gtaagcccgg tgtgagctcg ttcagctcag gtgtgaaaag ggttccgtac cggctcgatg
     6841 atactgtgat tgtaccaatc gctttacccg cgccggcgct atcgatccgc tgcatatgca
     6901 caattaattc ttcggcgtcg gcggacacac ttgctactga gagaacaaaa accgcagcag
     6961 t
//
LOCUS       DASQSL010001026         1661 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_8424, whole genome shotgun sequence.
ACCESSION   DASQSL010001026 DASQSL010000000
VERSION     DASQSL010001026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8424"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..423)
                     /locus_tag="VE844_10595"
     CDS             complement(<1..423)
                     /locus_tag="VE844_10595"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HZC01781.1"
                     /translation="MARVPEEIAPGVYRIDTIAIPNAISVLLVADTDGWTLIDTGIRS
                     GALRIQEALSTLGAGPRDLRRIYLTHQHDDHIGGLPAVRWWATEAEVVASEHEAQVIS
                     GERPLDPPSNKLFRFFARKQELPTVPVDRVVREGDSLAG"
     gene            681..1424
                     /locus_tag="VE844_10600"
     CDS             681..1424
                     /locus_tag="VE844_10600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016549999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase family protein"
                     /protein_id="HZC01782.1"
                     /translation="MNQQHQDTESQPSAHTSSGHYNLEILGIVSFFGLALLMGAEIYQ
                     GMAAFGYLWLLPVIAVLAYLAADFISGFVHFLADNFGSSQMPIIGPGFISGFREHHVD
                     PKGITRHDFIDTNGNNSLVSLPFMLLVWLVVPIEITVGGYFFGAFFLLLCLAVFLTNQ
                     FHKWAHTEDPPSFAVWLQRHGLILSKEHHDIHHASPYDTYYCITVGVWNPLLDRTRFF
                     KRTERLLRRIVPGADSRLRVEREGSLNER"
BASE COUNT          359 a          474 c          446 g          382 t
ORIGIN      
        1 gccagcgagg ctatcaccct cacgcacgac acgatctacc ggcacggtag gcagctcttg
       61 tttgcgggca aagaagcgga agagcttgtt ggatgggggg tccagaggac gctcgcctga
      121 gataacctgc gcttcgtgct ctgaggcaac gacttctgcc tctgttgccc accatcgtac
      181 ggctggtagg ccacctatat ggtcgtcgtg ttgatgggtt aggtaaatgc gcctcagatc
      241 tctcggccct gctcccagtg tgctaagtgc ctcctgaata cgtagtgcgc cgctgcgtat
      301 accggtatct atcagcgtcc aaccgtcggt atcggctacc agcaggaccg agatagcgtt
      361 aggaatcgct atcgtatcga tacgatacac tccgggcgcg atctcctctg gtaccctagc
      421 catatgtccc tccacttcat tcttctcggc tgaacagcac tttaggcctt cataatatga
      481 tacctagcga aagcgaatac cttattggaa gagcttgcgc gcagagttag ggggttgccg
      541 ctattcaccg agctgctgag aaggagggtg ttctcggaaa ccgagtaata gctacgcgtc
      601 gagtaatagc tacgcgtaca atgatccaat tgatccaata acgctttttg ttccgtatct
      661 tccttgtaaa ggaggtatta atgaaccaac aacatcagga tacggaaagt cagccaagtg
      721 cacacaccag cagtggacat tacaacttgg agatcctcgg gatagtgtct ttcttcgggc
      781 tcgcgctact tatgggggcg gagatctacc aggggatggc ggccttcggg tacctgtggc
      841 tcctgccggt catcgcggtc cttgcgtacc tggcggcgga ctttatctcc gggttcgtgc
      901 acttcctggc ggacaatttt ggatcttccc agatgccgat catcggcccc ggcttcatta
      961 gtggctttcg cgagcatcac gtggatccca agggcatcac tcgccacgac ttcatagaca
     1021 ccaacggtaa caacagcctg gtgagcctcc ccttcatgct gttggtgtgg ctcgtggtgc
     1081 ctatcgagat aacagtcggc gggtatttct tcggagcgtt ctttctcttg ctgtgcctgg
     1141 ccgtgttcct gacgaaccag tttcacaagt gggcgcacac ggaagatcct ccatccttcg
     1201 cggtctggct gcagagacac gggctgatcc tctcaaaaga gcaccacgac atccaccacg
     1261 caagccccta cgacacctac tactgcatca ccgtaggagt ctggaacccg ctgctagatc
     1321 gaaccaggtt cttcaagcga accgagcgac tgctccgccg tatcgtcccc ggtgcagact
     1381 ctcggctccg ggtcgaaaga gagggcagcc tcaacgagcg atgaaagaac actgaggcaa
     1441 attctcgaaa tcaacctttt agtcgagacg acacgatttg ctccttacgc tcggcgcttt
     1501 gtcccttgca ggctaatgat gacaccgagg gaagcccgat gcaccaccgg aggggctagc
     1561 atgtagagct agggccgggt tgcctctatt caccgagata ccgagaagcc cagttctcgg
     1621 caacccttat gcagcccggc gaatcgttat gtgttaagac c
//
LOCUS       DASQSL010001027         2181 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_47874, whole genome shotgun sequence.
ACCESSION   DASQSL010001027 DASQSL010000000
VERSION     DASQSL010001027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2181
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47874"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            231..1772
                     /locus_tag="VE844_10605"
     CDS             231..1772
                     /locus_tag="VE844_10605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015200684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HZC01783.1"
                     /translation="MDSERLTSSNLKIAPEDWALTPSSVQQVLLQVLERLAALEEEIS
                     RLRAENERLREQTRRSSRRVSQPPSSDAPSAPPRQQRQSSGRKRGAQPGHEGHQRKLY
                     PVEACRSISNHRPAACSACGTALSGDDPNPVRHQVVELPEVKPRVDEHRLHQLHCPDC
                     GKVTRAPGPSDVPASGYGPRLAATVGLLSGPYRQSERQTQQALCDFFQVDVALGTVNT
                     LRQEVSQAVAEPVAEAIVFAQAQEVANADETGWVQGNSDGTNPERRKAWLWVLVTTWV
                     TIFQVHLSRGQAAAKALLGEFAGYLITDRWTGYGWWPLDRRQLCWAHLIREFQKIAER
                     GGESQVIGEGLLAQARKLFELWHRVRDGTLTRPGFAAVVVEIRASVQQWLAAGAAYTV
                     ARGDKSARARTARTCRELLKVEQALWLFVRVAGVEPTNNAAERALRPAVIWRRTSLGT
                     QSALGSQFVTRLLTVTLTLRAQQRSVLEYLTAACEAARQGMPVPSLLPNLSLLEQEHH
                     FAIAA"
     gene            complement(1800..>2181)
                     /locus_tag="VE844_10610"
     CDS             complement(1800..>2181)
                     /locus_tag="VE844_10610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007907679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01784.1"
                     /translation="VDTLGLLMAVLVTAASVSDPAGARLLFARLGGACKKLRLLWVDG
                     TYRGQLVEWVARHMRFVLRVTLRPEGWKGFVLLPRRWVVERTLAWLNQSRRLSKDYER
                     LPKSSEAMIYLSMTRLMLHRLTAT"
BASE COUNT          438 a          627 c          705 g          411 t
ORIGIN      
        1 aatgaagtgg tagcggcaat accagctcgc ctctccgcct gtctcgtgca tcgtcgagcc
       61 ggttatcgaa cctggcagtg ggcagccagg ataagcgcat agccagtttt tggtgcgttc
      121 ggctcgagcc aagttggtgt ctttcagagg ctgtttgaaa agttgtaccc gttcacgggg
      181 gtagaaaaga cagcatgcaa aacaagacct gatttggtaa tctcaggtca atggactctg
      241 agcggctgac ttcttccaac ctcaagatcg ctcctgaaga ctgggcgctg acgccgtcca
      301 gtgtccagca ggtgttgttg caggtgctgg agcggttggc cgcgctggaa gaggaaatca
      361 gccgcttgcg cgccgagaat gagcggctgc gggaacagac gcggcgatct tcgcgccgag
      421 tatcgcaacc gccctcgagt gatgctccga gtgcgccgcc ccggcagcaa cgccaatcga
      481 gcggtaggaa acgtggcgct cagcccggtc atgaaggcca tcagcgaaaa ctctatccgg
      541 tcgaagcgtg tcggagtata agcaatcatc gcccggcggc gtgcagcgca tgcgggacgg
      601 ccttgtccgg cgacgatccg aaccccgtgc ggcatcaggt agtcgaattg ccggaggtca
      661 aaccacgggt ggatgaacac cggctgcatc aactgcattg cccggactgc ggtaaagtga
      721 cgcgcgcccc cgggccttcg gatgtccctg cgagcggtta cgggccgcgg ctggcggcga
      781 ccgtcgggct gctcagcggt ccctaccgcc agagcgaacg gcaaacccaa caggcgcttt
      841 gtgacttttt tcaagtcgat gtggccttgg ggacggtcaa cacgctgcgg caggaagtct
      901 ctcaagccgt ggccgagccg gtggcggaag ccatagtatt tgcgcaagcg caggaagtgg
      961 cgaacgcgga tgagactggc tgggtgcagg gtaacagtga tggcaccaac ccggagcggc
     1021 gcaaagcctg gttgtgggtg ctggtgacca cctgggtgac gatctttcag gtgcatctga
     1081 gccgcggcca agcagcggcc aaagcgttgc tgggcgagtt tgccggctac ctgatcacgg
     1141 atcgatggac gggctatggt tggtggccgc ttgatcggcg gcagttatgc tgggcacatc
     1201 tgatccgcga atttcaaaag atcgctgaac gcggcggaga atcgcaagtc atcggcgagg
     1261 gattgctcgc acaagcccgc aaattgtttg agttgtggca tcgtgtccgt gatgggactt
     1321 tgacgcggcc gggttttgcg gcggtcgtcg tcgagatccg cgcgagcgtc cagcagtggc
     1381 tcgcagcagg ggcggcttat acagtggcgc gtggggataa atctgcccgg gcgcgaaccg
     1441 cgcgaacgtg tcgtgagttg ctcaaagtcg agcaagccct ctggctgttt gtgcgcgtgg
     1501 caggtgttga gcctaccaac aacgcggcgg agcgcgcttt gcgtcctgcg gtgatctggc
     1561 ggcgaaccag tctcgggacg caatccgcgc ttggcagcca gttcgtcacc cggttgctga
     1621 ctgtcacgct cactttgcgt gcgcagcaac gttcggtgct ggagtatctg accgcagcct
     1681 gtgaggccgc aagacaagga atgcctgtcc cctcgttgct accaaacctc tctctgttgg
     1741 aacaagagca tcattttgct atcgctgctt gagacccccc gtgaacgggt acgaaaagtt
     1801 caggttgctg taagccgatg cagcatcaga cgcgtcatcg agaggtaaat catcgcctcg
     1861 ctactcttgg gcaaccgttc ataatctttg ctcaagcggc gtgactgatt gagccacgcc
     1921 agcgtacgct cgaccaccca ccgccgtggg agcagcacaa agcctttcca gccttctgga
     1981 cgaagtgtca cacgtaggac aaaccgcata tgccgggcga cccactcaac caactgcccc
     2041 cgataggtgc catcgaccca gagcaggcgc agctttttgc aggccccacc gagccgagcg
     2101 aagaggagcc gggcgccagc cgggtcagac accgaggcgg cggtgacgag cacggccatg
     2161 agcaacccca aggtatcgac c
//
LOCUS       DASQSL010001028         1545 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_47876, whole genome shotgun sequence.
ACCESSION   DASQSL010001028 DASQSL010000000
VERSION     DASQSL010001028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1545
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47876"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..673)
                     /locus_tag="VE844_10615"
     CDS             complement(<1..673)
                     /locus_tag="VE844_10615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018993475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HZC01785.1"
                     /translation="MYRLLHAFESIHVLVVGDIILDRYWFGTTSRISPEAPVPVVRIE
                     TTEDRPGGAGNVAMNVTSLGAKATLIGVTGTDEAAERLACQLHARGVQCYFRRVSGFT
                     TVTKLRILSQHQQLIRLDFEDGFQGLDPYNLLEDHRTHLDRAAIVVLSDYAKGSLVDV
                     KNLIEIARAAGKPVIVDPKGQDFSRYRGATVVTPNLKEFQAVVGACNEEDSLVDKAQT
                     LAQELG"
     gene            750..1472
                     /locus_tag="VE844_10620"
     CDS             750..1472
                     /locus_tag="VE844_10620"
                     /inference="COORDINATES: protein motif:HMM:NF022750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HZC01786.1"
                     /translation="MLARRLVVFLITLLAAAEVPAALPKPFTAWYTLHTRGLTIGTME
                     RRLEEVGSDGQYRYRSESRATGLVALFRDDRILEESRWMLENHQIRPLEYSYSYRGSK
                     RSRTIKMVFDWQRGTITDQDGDNTWHIPIVPGVLDKLVYQLRIMSDLQRGARQLEYRI
                     ADKGTIKTYRFAILGEEDLSTPLGRLRTIKIERRKANSKRKTTFWCAPILSYLPVRAE
                     YMENDSHLISAMIEKMSTTAAQ"
BASE COUNT          367 a          419 c          419 g          340 t
ORIGIN      
        1 gcccgagttc ctgagcgagt gtttgggcct tatcgactaa gctatcttct tcattacaag
       61 cgcccaccac ggcctggaac tctttaagat ttggggtaac cacggtggcg cctcggtagc
      121 gcgaaaaatc ttggcccttg ggatctacga tcacgggctt gccggccgcg cgcgcgatct
      181 caattaagtt cttcacgtcc accaggctgc ccttggcgta atcggagagc acgacaatgg
      241 cagcgcggtc aagatgagtt cggtgatctt caagcagatt gtaaggatca agcccctgaa
      301 acccatcttc aaaatccagc cggatcagct gctgatgctg gcttaagatc cgcaatttgg
      361 tgacggtggt aaatccactc acacgcctga aatagcattg gacaccccgg gcgtggagct
      421 ggcaggcgag cctttcggcc gcctcatcgg tcccggtaac gccgatgaga gtcgccttgg
      481 cgccgaggct ggtcacgttc atcgccacat tgcctgcccc accgggccgg tcttctgtgg
      541 tctcgatgcg caccaccggc acaggagcct cgggggagat gcgtgaagtc gtgccaaacc
      601 aatagcgatc cagaataatg tcgccgacga cgagaacatg gatggattca aatgcatgga
      661 ggagacgata cattgacttg ccgcccacct tggatcgtta taaagtgagt tcttatttta
      721 agaatcaatc ttaccacacg ctatcctcca tgcttgcaag gcgtctcgtc gttttcctta
      781 tcaccctgct tgccgctgcc gaggtgcctg cggctctgcc taaacccttt accgcctggt
      841 ataccttaca cacgcgaggg cttacgattg ggacgatgga gcggcgtttg gaggaggtcg
      901 gtagcgacgg ccagtaccgc tatagatcgg agagccgtgc taccggcttg gtggccctgt
      961 tccgcgatga ccggatcctg gaggaaagcc gctggatgtt agagaaccac cagatccggc
     1021 cgctggaata cagctactct tacaggggta gtaaaagatc ccgcactatt aaaatggtgt
     1081 tcgattggca acgcggcaca attaccgatc aagacggtga taatacctgg catataccga
     1141 tagtccccgg tgttttggac aagctcgttt atcagctgag gatcatgagt gatctgcagc
     1201 gaggcgcacg gcaattggaa tataggatcg ccgataaagg cacgatcaaa acctatcgct
     1261 ttgctatctt aggcgaggaa gacctcagca cgcctcttgg cagattgcga accatcaaga
     1321 tcgagcgccg taaagccaat agcaaacgta aaactacctt ttggtgcgcg cctatcttaa
     1381 gttatctgcc ggtacgcgca gagtatatgg aaaatgacag ccacctgatc tccgccatga
     1441 ttgagaagat gagcactacg gctgcccaat gaatcgaccg agaagatcac gccacggact
     1501 tagaaaccgt ctgaaaggtg tcgcgagcgt acgtagcaac ttttc
//
LOCUS       DASQSL010001029         1272 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_88526, whole genome shotgun sequence.
ACCESSION   DASQSL010001029 DASQSL010000000
VERSION     DASQSL010001029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1272)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1272)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1272
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88526"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..392
                     /locus_tag="VE844_10625"
     CDS             <1..392
                     /locus_tag="VE844_10625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020705866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HZC01787.1"
                     /translation="ESMIMKEPGEMRRILRRLKDIGVLLSIDDFGTGYSSLNHLKYFS
                     FDTLKIDQSFVRDLIINPSDAMIVLAIIAMARSFRIRVVAEGVETEAQLRYLQQNGCD
                     EIQGYYVSRPVPSDEAGRLLREDRPLL"
     gene            complement(426..911)
                     /gene="mlaD"
                     /locus_tag="VE844_10630"
     CDS             complement(426..911)
                     /gene="mlaD"
                     /locus_tag="VE844_10630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007146986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015914 - phospholipid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HZC01788.1"
                     /translation="MLQSKALETIVGAFIAVGMGALLVLAMKVSNLNLGDFGDDKVYQ
                     VRAQFENVGGLKVRAPVKMAGVTVGRVAAIEFNNTTYEAVAVLSIDKHYNRIPTDTLA
                     NIYTAGLLGEQYISLAPGGEETFLKHGDEITLTQSAVVLEQIISQFLYSRTAEGDKEG
                     G"
     gene            complement(928..>1272)
                     /locus_tag="VE844_10635"
     CDS             complement(928..>1272)
                     /locus_tag="VE844_10635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008289807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC01789.1"
                     /translation="PRLLAGILAMPLLAAIFSAVGIYGGYFVGVGLLGVDEGSFWSQM
                     QASVDLYEDILNGIIKSVVFGATVTWIAVFEGYDTLPTPEGISQATTRTVVNSSLAVL
                     GLDFVLTALMFD"
BASE COUNT          288 a          377 c          311 g          296 t
ORIGIN      
        1 ccgaaagcat gatcatgaaa gagccggggg agatgcgccg tatactcagg cgcttaaagg
       61 acatcggcgt cctcctatcc atcgatgatt tcggtactgg ctattccagc ctcaatcacc
      121 tcaaatactt ctcatttgat acgctcaaga ttgatcaatc ctttgtccgc gatctgatca
      181 tcaacccaag tgacgccatg atcgtcttgg ctatcatcgc tatggctcgc agtttcagga
      241 tccgagtggt cgctgagggt gtcgagaccg aagctcaact gcgctacctg caacagaacg
      301 gttgcgatga gatccagggt tattatgtaa gccggccggt gccctccgat gaagccgggc
      361 ggttacttcg ggaagatcgg ccgctgcttt agaagggaat cgagaacaca ttgctttaca
      421 ctgccctatc caccctcctt atctccctcc gctgtcctgc tgtagagaaa ctggctaatt
      481 atctgttcaa gcaccacggc ggattgggtc agggtgatct cgtcgccgtg cttcagaaag
      541 gtttcttctc cacccggcgc caggcttatg tactgttcac ccaaaagccc ggccgtgtat
      601 atgttggcaa gggtatcggt tgggatccgg ttgtagtgtt tatcgatact caagacggcg
      661 acggcttcat aggtcgtatt attgaattcg atcgcggcca cccgtcccac cgtcaccccc
      721 gccatcttga ccggcgcccg caccttaagc ccgccgacgt tttcaaactg ggctctgact
      781 tgataaacct tgtcatcgcc gaagtcgccg aggtttaagt tactgacctt catggcgagc
      841 accaggagcg ctcccatacc taccgcaata aatgcgccga cgatggtttc aagtgccttg
      901 gactgtaaca tgcttatccc ctcttactta atcaaacatc aacgccgtca ggacaaaatc
      961 gagtcccaaa actgccagac tggagttgac cacggtgcgg gtcgtggcct ggcttattcc
     1021 ttcgggggtc ggtagggtgt catagccttc aaacaccgcg atccaggtca ccgtagctcc
     1081 aaataccaca ctcttgatga tcccgttcaa tatatcttcg tagagatcca cacttgcctg
     1141 catctgtgac cagaacgacc cttcgtcaac cccaaggagc cccacaccca cgaaataccc
     1201 gccatagatg ccgaccgcac tgaagatcgc tgccagcaaa ggcatggcca ggatcccggc
     1261 gaggagcctc gg
//
LOCUS       DASQSL010001030         2624 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_60695, whole genome shotgun sequence.
ACCESSION   DASQSL010001030 DASQSL010000000
VERSION     DASQSL010001030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2624
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60695"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..227)
                     /locus_tag="VE844_10640"
     CDS             complement(<1..227)
                     /locus_tag="VE844_10640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01790.1"
                     /translation="MSQLILMIGRIDDLDNPEALTEVWRRAMPVVELSRMRPEHYLNG
                     LENDVMEVGWEAMRTLLVEQWRLSNEMLIRR"
     gene            complement(404..2431)
                     /gene="ligA"
                     /locus_tag="VE844_10645"
     CDS             complement(404..2431)
                     /gene="ligA"
                     /locus_tag="VE844_10645"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013032491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HZC01791.1"
                     /translation="MSLSKSAATRVKELRELIEYHNYRYYSLDDPIISDAEFDGLMRE
                     LEALEASYPELITADSPTQRVGGKPAQGFAEVLHKQPMLSLANAFTLAEVEAFDRRIR
                     EALDLEQVEYAAEPKLDGLAISLLYEQGRLTRAATRGDGFRGEDVTQNIRTIRSIPLR
                     LRGEDHPQILEVRGEIYMTKESFKSLNEQHLRSGTKIFANPRNAAAGSVRQLDPRITA
                     RRPLTILCYGTGTLEGGHIPPRHSERLAQLKEWGLRVSPEIAIVQGLEGCFSYYRSIG
                     EKRDKLPYEIDGVVYKVNLLEQQKILGFIARAPRWAIAHKFAPNEQQTRISAIEVQVG
                     RTGALTPVARLEPVFVGGVTVTNATLHNQDELNRKDVRVGDTVVVRRAGEVIPEIVRV
                     VLDQRPPYSQRFMIPKQCPVCGSEVIRAEGEAVARCTGTLSCPAQRIQAILHFGSRRA
                     MDIQGLGDKLVEQLVERGEVRDVADLYRLTEARLAQCERMGKKSASNLIAALEHSKDT
                     TLARFLYALGIRDVGEATARLLAAHFGSLEAIREAGMETLQAIPDIGPVLAANIAAFF
                     RQDHNLEIIHRLRQAGVHWHEFEAVSLVKPLAGLTFVITGTLQSMTREQAKERLLALG
                     AKVSTSVSKSTSFVVVGAEPGSKADQARELGIPVVDEQGLLEKVQAHPYPS"
BASE COUNT          509 a          806 c          738 g          571 t
ORIGIN      
        1 aaacgcctga tcagcatttc gttgctcaac cgccactgct caaccagcag ggtgcgcatc
       61 gcttcccatc caacttccat cacgtcattt tccagtccgt tcaggtaatg ttccggccgc
      121 atacggctca gctccaccac cggcatggct ctccgccaca cttcggtgag cgcttcagga
      181 ttgtcaagat catcaatacg ccctatcatc agtattaatt ggctcatata aggtctcccg
      241 atgttcgcct ttcggcggag tgtagacatc gaggatactc gtatgggcca attttcatca
      301 agggcgcgtc ccatcacttt ggcgcgctaa caattctcgt gttttaccat ttgagtgaca
      361 ggtcgcgatc gaatgaagga ctacggctgc tcgataagct ggatcaagat ggatagggat
      421 gagcctgcac tttctctaat aagccctgct catccaccac ggggatcccg agttcccgag
      481 cctgatccgc tttagacccc ggttctgcgc ccacgaccac aaagctcgtg ctctttgaga
      541 cgctcgtgct caccttggcc ccaagcgcca gcaaccgctc tttggcctgc tcccgggtca
      601 tcgactggag tgtcccggtg atcacaaagg tcaaacctgc caagggcttc accaggctca
      661 ctgcctcgaa ctcgtgccaa tggacgcctg cctgccgcag ccgatggatg atctcaagat
      721 tgtgatcctg acggaaaaag gcggcgatat tcgctgccag cacaggcccg atatcgggga
      781 tcgcctggag tgtttccatg ccggcctccc ggatcgcctc gagtgaaccg aagtgagcgg
      841 cgagcagcct agcggtcgcc tcgccaacat cccggatccc aagggcgtag agaaaccgtg
      901 ccaaggtcgt gtccttgctg tgttccaagg cagcgatgag gttgctcgcc gattttttcc
      961 ccatacgttc acattgcgct agccgtgcct cggtcaagcg gtatagatcg gccacatcgc
     1021 gcacctcacc ccgttccacc agttgttcca cgagcttgtc acccaagccc tgaatatcca
     1081 tagcccggcg ggaaccaaaa tgcaggatcg cctggatccg ttgcgctggg cagctaagcg
     1141 tgccggtgca acgggccacg gcctcgcctt ctgcgcggat cacctcggaa ccgcagactg
     1201 ggcactgctt ggggatcata aagcgttggc tatagggggg acgttggtcg aggaccaccc
     1261 ggacgatctc cgggatcacc tcgcccgcgc ggcgcaccac cacggtatca ccgacccgca
     1321 catccttgcg attgagctca tcctgattgt gaagcgtggc attggtgacg gtcaccccgc
     1381 ccacaaatac gggctcgagc cgagcgacag gcgtcagcgc cccggtgcgc ccgacctgga
     1441 cctcgatggc cgagatccgg gtctgctgct cgttgggcgc gaatttatgg gcgatcgccc
     1501 accgtggggc acgggcgatg aaacccaaga tcttttgctg ttccaataga ttgaccttgt
     1561 aaaccacccc gtcgatctca tagggcagct tatcccgttt ttcaccgatg ctccgataat
     1621 aactgaaaca gccttccagg ccctgaacta tggcgatctc gggtgatacg cgcaagcccc
     1681 attccttgag ctgggcaagc cgctcgctat gacgcggcgg aatgtgtccg ccttccagcg
     1741 tgccggtgcc gtaacacagg atcgtcaagg gccggcgagc cgtgatccga gggtccaatt
     1801 gacgcacgct gccggccgcg gcattgcgag gattggcgaa gatcttggtc ccggatcgca
     1861 ggtgctgttc gttgagggac ttgaagcttt ccttggtcat atagatctcc cctcgcacct
     1921 ccaagatctg gggatgatcc tcgccacgta gcctcagggg gatgctgcgg atggtgcgaa
     1981 tattttgcgt cacatcctct ccgcggaagc catcacctcg ggttgcagcg cgcgtaagcc
     2041 ttccctgttc ataaaggagg ctaatcgcca gaccgtcgag tttcggttct gcggcatact
     2101 ctacctgttc gaggtccagc gcttcgcgga tgcggcggtc gaaggcctcg acctcggcga
     2161 gcgtaaacgc attggcgagt gagagcatcg gctgcttatg caggacttca gcaaagcctt
     2221 gggccggctt gccgcccacg cgctgggtgg gtgaatcggc ggtgatcagt tccgggtagc
     2281 tggcctccaa tgcctcgagc tcccgcatca gtccatcgaa ctcggcgtct gagatgatgg
     2341 ggtcatcgag ggaatagtag cggtaattgt ggtattcgat gagctcacgg agttctttta
     2401 cccgtgttgc tgctgatttg gatagagaca tgcctcgctc ctctaattcc ccctccctca
     2461 cgaagggaga agggattagg cgcctcccta taccctgacg gcgttcgcta ccaggctgcg
     2521 caggcgctca atcccctcgg cagtcagggg tttacggtag tcgtccagga gttcgccgtg
     2581 caggcgtttc agcaaccgct gtgctgtatt cagcataaga tcaa
//
LOCUS       DASQSL010001031         1504 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_88543, whole genome shotgun sequence.
ACCESSION   DASQSL010001031 DASQSL010000000
VERSION     DASQSL010001031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88543"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(27..1217)
                     /locus_tag="VE844_10650"
     CDS             complement(27..1217)
                     /locus_tag="VE844_10650"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015174217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HZC01792.1"
                     /translation="MISRISSEVRPSERMQCVQPPIIPIVGELSRMVPGTISMGQGVA
                     YYGPPPHVFERVKRFLSDWENHKYGSVQGLSPLIELIAEKLHTENTILGDDGRQIVVT
                     AGANMGFLNTLFAITDPGAEVIVPLPYYFNQEMAIRMLNCTPVAVPTDDRYQPRIDRL
                     RAAITERTRAIVTISPNNPSGAVYPEALLREINSLCRLHGIYHISDEAYENFTYGAAR
                     HFSPAAIEGAETHTIALYSLSKAYGFASWRIGYMLIPEHLYASVLKAQDTNLICAPLI
                     SQYAALGALEVGSSYCRERLPAIERVRAVVLDELATLGSVCTLPLAEGAFYMLIKVHT
                     EMHPMEVVKRLIKEHRVAVIPGTAFGLDGGCYLRISYGALDPLTATEGIRRFTHGLKA
                     ILNQ"
     gene            complement(1252..>1504)
                     /locus_tag="VE844_10655"
     CDS             complement(1252..>1504)
                     /locus_tag="VE844_10655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013220180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HZC01793.1"
                     /translation="RDHIKPLSRGGKDIWSNVVTACKACNARKGNRSPEEAGMALLAI
                     PYVPNWAEFLALTNRKILADQMEFLRAQFSNQGRRLSFQ"
BASE COUNT          333 a          424 c          444 g          303 t
ORIGIN      
        1 atgagcgcgc gctccatggc aaataattat tggtttaaaa tcgctttgag cccgtgggtg
       61 aaccgccgga tgccctcggt ggccgtgagc ggatccagcg ccccatacga gatccgcaga
      121 taacatcccc catcgaggcc gaaggccgtg cctgggatca ccgctacccg gtgctctttg
      181 atgaggcgct tcaccacctc cataggatgc atctcggtat gcaccttaat aagcatataa
      241 aaggcgccct ccgcgagtgg cagggtacag accgagccga gcgtagccaa ttcatcgagc
      301 accacggcgc gcacccgctc gatagccggt aatctctccc ggcaatagct agaaccgact
      361 tcaagcgccc cgagggccgc atactgtgag atcaatggcg cgcagatgag attggtgtcc
      421 tgggctttga ggaccgaggc gtatagatgt tcggggatga gcatataacc gatgcgccag
      481 ctggcaaagc cataggcctt ggacagcgaa tagagcgcga tcgtatgggt ttctgcgccc
      541 tcaatcgcgg ccggcgagaa gtgccgggcc gcaccgtagg tgaagttttc ataggcctca
      601 tcgctgatat gatagatccc gtgcaggcgg cagagactgt tgatctcccg tagcagggct
      661 tcagggtaaa cggcaccgct tggattgttt ggggagatag taacgatggc tcgggtccgc
      721 tcggtaatgg ccgcgcggag ccggtcgatc cgaggctgat agcgatcatc tgtgggtacc
      781 gccaccggcg tgcaattgag catcctgatc gccatttcct gattgaaata ataaggtagc
      841 ggcacgatca cctcagcgcc cggatcggtg atggcaaaga gagtgttgag aaaccccata
      901 ttggccccgg cagtgactac gatctggcgg ccatcatcac ccaggatagt gttctccgtg
      961 tggagctttt ctgcgatcag ctcgatcagc ggagacagac cctggaccga gccatacttg
     1021 tggttttccc agtcagagag aaaccgcttg acccgctcaa aaacgtgtgg aggcggtcca
     1081 taataggcca ccccctggcc catggaaatg gtgccaggca ccatgcggct gagctcgccg
     1141 acgatgggga tgatcggcgg ctgaacgcac tgcatgcgct cactcggacg gacttctgag
     1201 gagatccgcg agatcataga caaaggcgcg actcataaag gcctaccgca cttactggaa
     1261 actaagccgc cggccttggt tgctaaactg ggcgcgcaga aactccatct gatcggcgag
     1321 tatcttgcgg ttggtcaagg ctaaaaattc tgcccagttg ggcacatagg gtatggcaag
     1381 tagggccatc cccgcttctt ccgggctgcg attgcccttg cgggcattgc aagccttaca
     1441 ggcagtcacc acgttcgacc aaatatcttt gccgcctcgc gacaagggct ttatatgatc
     1501 ccgc
//
LOCUS       DASQSL010001032         1020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_185611, whole genome shotgun sequence.
ACCESSION   DASQSL010001032 DASQSL010000000
VERSION     DASQSL010001032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185611"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(132..536)
                     /locus_tag="VE844_10660"
     CDS             complement(132..536)
                     /locus_tag="VE844_10660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01794.1"
                     /translation="MLYSPHSPAEAKKHGAFRPVRQARSEVAMGIVTTIIVVVAIAWV
                     VWVLVAIRHQLRSGDIVVPPMFASTLLFGLGIVAVIALGASPLHLLWWFPLSVVLGVV
                     VLMFPAGVTFTMACLGLLAGLKPRQDSSTKRR"
     gene            535..>1020
                     /locus_tag="VE844_10665"
     CDS             535..>1020
                     /locus_tag="VE844_10665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC01795.1"
                     /translation="MALWWEWFRCVQALRPACARRWTFVWMTLVLAGLSIRSERAGVS
                     SMVRALGLKAVCYRRLLYVYHSPGLCLERLRACWTRLALKVFRPLRLGGRLLVIGDGL
                     KVAKEGRKMPAVKKLHQSSANNSKATYIFGHSLQALGLLVCGPLGHLLSVPLTSHIHE
                     GV"
BASE COUNT          211 a          257 c          330 g          222 t
ORIGIN      
        1 gtcgtgctat tggttttcaa tcatccgcaa aatgtcgtat cactgcgtaa ggtgagttat
       61 cacttcatct tgtctgcctt atgcaaatac tgatttggta ttacttctgg acagtgccaa
      121 gttctcaagt gttatcggcg tttagtcgaa gagtcctgcc tgggtttgag tccggccagc
      181 aggcccaaac aagccatggt gaaagtcacg cctgccggga acatcagtac cacgacgccg
      241 agcacaacgc tcagtggaaa ccaccagagc agatgcagcg gcgaagcgcc cagcgcgatc
      301 acagcgacaa tgcctagacc aaacagcaag gtcgaggcga acattggcgg cacaacgata
      361 tcgccgctgc gcagttgatg acggatcgcg acgagcaccc acaccaccca ggcgatggcc
      421 acgacgacga taatggtagt gacgatcccc atagccacct cggagcgtgc ttgcctcacc
      481 gggcggaaag cgccatgctt tttagcttca gccggtgaat gaggagagta taacatggcc
      541 ttatggtggg agtggtttcg ctgtgtccag gcgctacgcc cggcgtgtgc gcggcgatgg
      601 acttttgtgt ggatgacgct ggtgttagcg gggttatcga ttcggtcgga gcgggcgggg
      661 gtgagcagta tggttcgggc cttgggtctg aaagcggtct gttaccgtcg cttgctgtat
      721 gtgtaccata gcccagggtt gtgtctggag cgactgaggg cgtgttggac ccggttggcg
      781 ttgaaggtgt tcaggccgtt gcgcctgggc gggcggcttt tggtgatcgg cgatgggctg
      841 aaagtggcca aggaaggacg caaaatgccg gcggtgaaga aactgcatca aagctcggcg
      901 aataactcca aagcgaccta catcttcggt cattcgttgc aggcgctggg gttgttggtc
      961 tgcgggccgc tggggcatct cctgagcgtg ccgttgacca gccacatcca cgaaggggtg
//
LOCUS       DASQSL010001033         1759 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_47903, whole genome shotgun sequence.
ACCESSION   DASQSL010001033 DASQSL010000000
VERSION     DASQSL010001033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1759)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1759)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1759
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47903"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1759
                     /gene="dnaE"
                     /locus_tag="VE844_10670"
     CDS             <1..>1759
                     /gene="dnaE"
                     /locus_tag="VE844_10670"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018953132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HZC01796.1"
                     /translation="VDKLAKLIPFELNMTLDRAFAEEPALRERYDKEEEVRTLIDLAR
                     KLEGLTRNAGKHAGGVVIAPSPLTDFMPLYQEQGAATPVTQFDMGDVETIGLVKFDFL
                     GLRTLTILDWAVRDINRIRAERDEEALDIACIPLDDPATFGLIQGARTTAVFQLESRG
                     MKDLIKRLAPDVFEDLIALVALFRPGPLQSGMVDDFINRKHGRAKVTYPHPELEPILK
                     PTYGVILYQEQVMSIAQVLAGYTLGAADLLRRAMGKKKPQEMAKQRAVFLEGAGKRGV
                     DADTAGYIFDLMEKFAGYGFNRSHSAAYALISYQTAWLKAHYPAAFMAAVLSSDMDHT
                     DKVVALIGECRRMNMAILPPDLTTCDYRFTVAGDNSIRYGLGAIKGVGAAAIEALTSE
                     QKQQGPFQDLFELCRRVDLKKANRRALEALIRAGALDKLGPGRSAMMAALEHALQLAE
                     QRTKNSAFGQDDLFGLGTPSDAQQERGRTAGLAFVDVPEWSEQERLAGEKETLGLYLT
                     GHPVSAYEAELKPLITTELADLKPGTQRIGGLVAGLRTNTSKRGRMAVATLEDGSGRV
                     EVVIYAETLQKYTELLVKDR"
BASE COUNT          356 a          505 c          539 g          359 t
ORIGIN      
        1 tgtcgataag ctggcgaagc tcatcccctt tgaattgaat atgaccctgg atcgggcctt
       61 cgccgaagag cctgcgctgc gcgagcgtta cgataaggaa gaagaggtcc gcaccctcat
      121 cgatctcgcc agaaagctcg aggggcttac ccgcaatgcc ggcaagcacg ccgggggcgt
      181 ggtcattgcg ccttcgccgc tcaccgactt tatgccgctc tatcaggaac agggcgctgc
      241 aacaccggtg acccagttcg atatgggcga tgtcgagact attggtctgg tcaagtttga
      301 ttttttgggg ctcaggacgc ttaccatcct cgattgggcg gtgcgggaca tcaatcggat
      361 ccgcgctgaa agagatgaag aggcccttga tattgcctgt atccccctcg atgatccggc
      421 gaccttcggg ctgatccaag gggcccggac gaccgcggtg tttcagctcg agtcacgcgg
      481 catgaaggac ctcatcaagc ggctcgcccc ggatgtgttt gaggacctca ttgcgctcgt
      541 ggccctgttt cggcccggtc ccctgcaatc ggggatggtc gatgatttta tcaaccgcaa
      601 acacgggcgc gccaaggtta cctatccgca ccccgagctc gagcctattc tcaaacccac
      661 ctatggcgtg atcctgtatc aagagcaggt catgagtatc gcccaggtgc tcgccggcta
      721 cacgctgggg gcggccgatc tcctgcgccg cgccatgggc aagaaaaagc cccaggagat
      781 ggccaagcag cgtgcggtgt ttttagaagg tgccggcaag cgcggcgtcg atgccgatac
      841 tgccggctat atctttgatt taatggagaa atttgcgggt tatggcttca atagaagcca
      901 cagtgccgcc tacgccctga tctcttatca gaccgcctgg ctcaaagcgc attatcctgc
      961 cgccttcatg gccgcagtgc tgtcctctga catggatcac accgacaagg tcgtcgccct
     1021 catcggcgaa tgccggcgta tgaatatggc aatcttgccc cccgatctca cgacctgcga
     1081 ctaccggttt acggtagccg gtgataactc tatccgctac ggtcttgggg caatcaaggg
     1141 agtgggggcc gccgccatcg aagccctcac ctctgaacag aagcagcagg ggccttttca
     1201 ggatctgttt gagctgtgcc ggcgggtcga tctcaaaaag gccaatcgcc gcgccttaga
     1261 ggcgctgatc cgagcggggg ccctggataa gctcggtcct ggccggagtg cgatgatggc
     1321 tgcgctcgag catgcgctgc aactcgccga gcagcggacc aagaattcgg ccttcggcca
     1381 ggatgatctg ttcggattag ggacgccttc agacgcgcaa caggagagag gacggactgc
     1441 cggcctggct tttgtcgatg tccccgagtg gtctgaacaa gagcgcttag cgggcgagaa
     1501 ggagacctta ggcctttatc tgaccggaca tccggttagc gcttatgaag cggaacttaa
     1561 gccccttatc actactgagc tggccgatct gaaacccggc acccaacgca taggtgggct
     1621 ggtggcgggt ttgcggacca atacgagcaa gcgcgggcgt atggccgtcg ctaccctgga
     1681 ggatggcagc gggcgggtgg aggtcgtgat ctatgccgag acgctgcaaa agtatacaga
     1741 acttctggtg aaggaccgg
//
LOCUS       DASQSL010001034         1305 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_129161, whole genome shotgun sequence.
ACCESSION   DASQSL010001034 DASQSL010000000
VERSION     DASQSL010001034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129161"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            177..359
                     /locus_tag="VE844_10675"
     CDS             177..359
                     /locus_tag="VE844_10675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01797.1"
                     /translation="MRLIQMTAAVVWGVPCFFSDGLSSYWPALIAVYHQLKEFARTGN
                     RGCPRKPVLEPHPEWV"
     gene            366..818
                     /locus_tag="VE844_10680"
     CDS             366..818
                     /locus_tag="VE844_10680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01798.1"
                     /translation="MVKKKKRGRLHSLNERICWGAARLTALGQKISTSLVERFNLTLR
                     HALAPLTRKCWGVCKDRQQLRRRVVFFQAFYNFARPHQSLRLPLPASAQPRTGLIQLK
                     WQAQTPGMAAGLTDHVWTFRELLIAKFEPILNQSISGWCATRRLTTCG"
BASE COUNT          290 a          348 c          406 g          261 t
ORIGIN      
        1 ttcaactgga cgaggtgtgg aacttcatcg cgtgcaagca ggctaccgcc gcaaccccgg
       61 acggtgaaag ctccgacgag agcgcggatg gacgccaatg ggtatgggcc agcttcgcgc
      121 ccgagtttcg cctgctgctc gccgcctagg tcggcccacg cacgttccag agcgccttgc
      181 gtttgattca gatgacggcc gctgtcgtct ggggtgtgcc ctgtttcttc agtgatggct
      241 tgagcagtta ctggcccgca ctgatcgcgg tctaccacca actcaaggag tttgcgcgca
      301 cgggcaaccg cggatgcccc cgcaaacccg tgttggaacc ccatcctgaa tgggtctagg
      361 cgcatttggt caaaaagaag aagcgaggcc gcctgcactc gcttaacgag cgtatctgtt
      421 ggggggcagc gcgactgacc gccctgggac agaagatcag taccagtttg gttgaacgtt
      481 tcaacctgac cttgcggcat gcgttggctc ccttgacaag aaagtgctgg ggcgtctgta
      541 aagaccgcca gcaactccgt cgccgcgtgg tcttctttca ggcgttttac aacttcgcgc
      601 gtccgcatca gagtctacgg ctgcccttgc cagcatcggc tcagccacgg acaggtttga
      661 ttcagcttaa gtggcaagct caaacaccgg gcatggcggc gggtttgact gatcatgtct
      721 ggaccttcag agagctactg atagctaaat ttgaaccgat cctaaatcaa agtattagcg
      781 gatggtgcgc cacgaggcgc ctaactactt gcggctgaaa gtgccgcctg agaagtggtg
      841 acccgccaca ctcagtatcg agccttgggc ttttgctggt aacaggagga gccaagcgta
      901 ggcagagagg gtgcaggccg taagcctgtg gctgaagtga ttgagccccg ttaaagtaca
      961 ttttcgggat ggctgatggt ttcatacggc cagaaggcaa catcgcacgc ggcgagagtg
     1021 ggcagcgacg tgtgacatcc ccggggtctg agagcatggc atgtatccaa agtagttagg
     1081 tgaacgtggg aggtcctgct cgctcttcta gggacgggaa gtatcggtga acaagtctaa
     1141 cagcgaggac accgaaacgg cggtcaggaa gtcagatggg gcatagttac cgttgaagcc
     1201 gagtaacgtc ggcggaggaa aggcccctgg gcaaaatcaa ccttggaggg gacacgtcat
     1261 ggggacaccc gagccctaca ctatgacgga cacgaaacta aagag
//
LOCUS       DASQSL010001035         3388 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_168499, whole genome shotgun sequence.
ACCESSION   DASQSL010001035 DASQSL010000000
VERSION     DASQSL010001035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3388
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168499"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..171
                     /locus_tag="VE844_10685"
     CDS             <1..171
                     /locus_tag="VE844_10685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012474914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISAzo13 family transposase"
                     /protein_id="HZC01799.1"
                     /translation="NLIASTKTSSGLKVYAILDDRTYPLKKEVSDQEMETLTIERNEF
                     HGEWNYTIRPKL"
     gene            320..1426
                     /locus_tag="VE844_10690"
     CDS             320..1426
                     /locus_tag="VE844_10690"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01800.1"
                     /translation="MYLTEVRSRSKNKIYRCILLREAYRQGGKVKNRTLANLSHGTPG
                     EIEAIRLALAHKSDLTVLGSLAEAVEVCEGVSIGAVWTVYQVARRLGIERALGTQRAG
                     KVVLWQVMARVIDQGSRLSAVRLAQTHAACDILGLRGFDENDLYEDLGWLADHQRAIE
                     RRLFRARQAEQKPKLFFYDVTSSYLEGQCNELAAWGYNRDKKAGKPQIVIGLLGEEGG
                     EPVATEVFQGNTLDFATLGLQVKKITEVFGCQQVTVVGDRGMLKSDQIEELKQAGLHY
                     ITALTKGQIRALLRHALGDVWGAGGGSHPDRNTVCVAAQSAAGRRTGYHSPRQARAAR
                     AGADQVQPLLDRAPAGARGHRPQSDPEPVGPAAA"
     gene            1374..1964
                     /locus_tag="VE844_10695"
     CDS             1374..1964
                     /locus_tag="VE844_10695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01801.1"
                     /translation="MDTALKAIQNQLARLRLEKWLTVRVEGRRLQVVEDPAALTAESR
                     VDGCYVLKSDLAPAVADMHTIHDRYKALAEVERAFRTCKTGHLEVRPVFVRTQESTRG
                     HVLVVMLAYLIVRYLRRAWAALDLTVEEGIAQLATLCSLQVGIKGHSTCHRLPLPREP
                     SAQLLKAAGIHLPKVLPSQGARVVTRKQLPSHRPKP"
     gene            complement(2001..>3388)
                     /locus_tag="VE844_10700"
     CDS             complement(2001..>3388)
                     /locus_tag="VE844_10700"
                     /inference="COORDINATES: protein motif:HMM:NF033540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS701 family transposase"
                     /protein_id="HZC01802.1"
                     /translation="VHDLGQRLQGFWERFRGGFKTKTRDGSAYARHYLSGLLRMKGER
                     HFSGIVREAGVGGQNIQHFMSESPWSGEAVCRQVQDELKATPELLSGGVLLVDESADE
                     KAGDKVAGAGKQYNGRMGKVETSQVGVLLSYVSLKVAQGFWTWLDGKLFLPEEGFEES
                     HKALRERLGIPKSRLFKTKVELAWELIEGVMSRGLSFEMVGFDTLYGRSGWLRGKVRG
                     AGQVYMAEVPVDTQVYLEKPLLGIPERKGKHGRKPSHIQVLSGEAVRADSLRERLTGR
                     LIPVRTTERGELCERFAACRVWTVHEGKAVEDWLVMREESQGKYSYALCNAPADMPLE
                     QLAWWKCQRYFIERANQDSKSELGWDEVRAQKYRAWEHHLALTVLASWFVAQTKFEWA
                     QDYPRDPALLSQFNTEVLPALSVANARELLRAVMPLKQLTAEQATERIIEHLLNRTRS
                     RKSRIKTDVHL"
BASE COUNT          696 a         1001 c          980 g          711 t
ORIGIN      
        1 aatctgatcg cctcgaccaa gacaagctcc ggcttaaaag tatacgcgat acttgacgac
       61 cgaacatacc cgcttaaaaa agaagtctct gaccaggaaa tggaaacgct caccatagaa
      121 cgaaacgaat ttcatggtga atggaactat acgattaggc cgaaactttg atgaaacttt
      181 atttatttac gtcacctaag tatttatcag ctaaggagaa tcggtccatt ttgtcgtcac
      241 agtgtagtca gtaatatttt ttataatctc tatatttctc ttgagattat ctagatttta
      301 tggattaatt gtagccagta tgtatctgac tgaggtccgt tcccgttcca agaataagat
      361 ttaccgctgc atcctgttgc gggaggccta tcgccaaggg ggcaaggtca agaatcgcac
      421 cctggctaat ctgtcccacg gcacgccggg agagattgaa gccattcgct tagccttggc
      481 ccacaagagc gatctaaccg tgctgggctc gctggcggag gcggtggagg tctgcgaggg
      541 tgtgagcatt ggggcggtgt ggacggtgta ccaggtggcg cggcggctag ggattgaacg
      601 cgccttgggc acccagcggg ccggcaaagt ggtgctgtgg caagtgatgg cgcgggtgat
      661 cgaccagggt tcgcggctgt cagcggtgcg attggcgcag acgcacgccg cgtgtgacat
      721 cttaggcttg cggggctttg atgaaaatga tctgtatgag gacctaggct ggctggcgga
      781 ccaccagcgc gcgattgaga ggcgcttatt tagggcacgg caggctgagc agaaaccgaa
      841 gctattcttc tacgatgtca cgagcagcta tttggagggg cagtgtaatg aactggccgc
      901 ctggggatac aaccgcgaca agaaagccgg taagccgcag atcgtcattg ggctgttggg
      961 tgaggagggc ggggagcccg tcgccaccga ggtcttccag ggcaataccc tggacttcgc
     1021 cacgctgggg ttgcaggtta agaagatcac tgaggtgttt gggtgtcagc aggtgaccgt
     1081 ggtgggtgac cggggtatgc tgaagagcga ccaaatcgag gagttgaagc aagctggctt
     1141 gcactatatc acggcgctga ccaaggggca gattcgggcg ttgctgaggc atgcacttgg
     1201 agacgtttgg ggcgcaggtg ggggaagtca cccagaccgg aatacggtat gtgttgcggc
     1261 gcaatccgca gcgggccgcc gaactggcta ccactcgccg cgccaagcaa gagcggctcg
     1321 agcgggagct gaccaagtac aaccgctact tgaccgagca cccgcgggcg cgcgtggaca
     1381 ccgccctcaa agcgatccag aaccagttgg cccggctgcg gcttgagaag tggctgacgg
     1441 tgagagtcga ggggcggcgg ctgcaggtag tggaagaccc agcggccttg accgcagaga
     1501 gccgtgtaga tggctgttat gtccttaaaa gcgacctcgc gcccgccgtg gcggacatgc
     1561 atacgattca cgatcgctac aaagcgctgg ccgaagtaga acgggccttc cgcacctgca
     1621 agacgggaca tttggaagtc cgccccgtgt ttgtgcggac tcaggagagc acgcgtggcc
     1681 acgtgctggt ggtgatgctg gcctacttga tcgtgcgcta cttgcgccgg gcctgggccg
     1741 cactggacct gactgtggaa gaaggcatcg cccaactcgc aacgttgtgc tcactgcaag
     1801 tggggattaa agggcacagc acgtgccatc gcctcccact cccccgcgag ccctcggctc
     1861 agttactgaa ggcggctggg atccacttgc ccaaggtcct gccgtcccaa ggcgcccgtg
     1921 tagtcactag aaaacagctc ccctcgcacc gcccaaaacc ttaattttat tgggggttgg
     1981 agccattttg aggtgcgctc tcaaaggtga acatccgttt taatacgact cttccgtgaa
     2041 cgggtacggt tgagcaagtg ttctataatc cgttcggtag cctgttccgc agtcaattgt
     2101 ttcaacggca tgacggcgcg tagcagttcg cgggcattgg cgaccgacag ggcgggcagg
     2161 acctctgtgt tgaattggct cagcaacgcc gggtcacgcg gatagtcctg agcccactcg
     2221 aatttggtct gcgccacgaa ccaggaagcc aggacggtga gggcgagatg atgttcccaa
     2281 gcgcggtact tctgcgcccg cacctcgtcc caacccagtt ccgatttgct gtcctggttg
     2341 gcgcgctcaa tgaagtagcg ttggcacttc caccaagcca actgctccag gggcatgtcg
     2401 gcaggcgcgt tacacaaggc atagctgtac ttgccctggg actcctcgcg catcaccaac
     2461 cagtcttcca ccgctttacc ctcatgcacc gtccacaccc ggcaggcggc aaagcgttcg
     2521 cacagctcgc ctcgctcggt cgttctgacc gggataaggc gccctgtcag cctctctcgc
     2581 aggctgtctg cccgcaccgc ttccccagac aatacctgga tgtgtgaggg cttgcggcca
     2641 tgcttgcctt tgcgctccgg gatgcctaac agcggcttct ccaggtatac ctgggtatcc
     2701 accggcactt ctgccatata cacttgaccc gcgccgcgca ctttgccacg tagccaaccg
     2761 cttcgcccgt acagggtatc aaagcccacc atctcaaacg aaaggccccg gctcatcacc
     2821 ccttcgatca gttcccaggc cagctccacc ttggttttga aaagccgcga cttcgggatg
     2881 cccagccgtt cacgcaacgc cttgtggctc tcctcaaacc cctcttcggg taggaacagt
     2941 ttcccgtcta accaggtcca aaagccttgt gccaccttga ggctcacata gctcagtaac
     3001 acccccacct ggctcgtctc tactttgccc atccgcccgt tgtactgctt gcctgctccc
     3061 gcgactttat cgccagcctt ctcatcagcg ctctcgtcta ccagcaatac cccacccgag
     3121 agcagttcgg gcgtggcctt caactcgtcc tgcacttgcc ggcagaccgc ttcacccgac
     3181 cacggcgatt cactcatgaa gtgctggatg ttctgccctc ccacccccgc ttcccggact
     3241 atcccgctaa agtgccgctc acccttcatc cgcagcagcc cgctcaggta gtgacgcgca
     3301 taggcactgc cgtctcgggt cttggtcttg aagccgcctc gaaacctttc ccaaaagccc
     3361 tgcagccgtt ggccaagatc gtgtaccg
//
LOCUS       DASQSL010001036         1034 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_22561, whole genome shotgun sequence.
ACCESSION   DASQSL010001036 DASQSL010000000
VERSION     DASQSL010001036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1034
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22561"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..677)
                     /gene="thiL"
                     /locus_tag="VE844_10705"
     CDS             complement(<1..677)
                     /gene="thiL"
                     /locus_tag="VE844_10705"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006474057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009030 - thiamine-phosphate kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HZC01803.1"
                     /translation="MPLGEFDLIHRYFERSIEQRQDVIVGIGDDGAVVRVPPGVELVL
                     TSDTLVAGVHFSEDIPPEDLGYKALAVNLSDLAAMGARPAWATMALTLPQAEEAWLAA
                     FAHGFFELAQRFSVALIGGDLTRGPLSITVQMHGFVPEGRALRRSGAQAGHYIYVTGT
                     LGDAALALTPRLAELTDTYRPYLLGRLYRPSPRVSEGLILRAIASSTIDISDGLIADL
                     GHILEAS"
     gene            complement(685..>1034)
                     /gene="nusB"
                     /locus_tag="VE844_10710"
     CDS             complement(685..>1034)
                     /gene="nusB"
                     /locus_tag="VE844_10710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002811333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HZC01804.1"
                     /translation="QILGEFIAERELIKVDMDYFQCLTREIPTHIGILEQPLIGVLDR
                     PIHELDPVERAVLWIGVYELRFHPEIPWRVVINEAVELTKIFGATKAHKYINGVLDKV
                     ARLLRPHEIASIP"
BASE COUNT          236 a          310 c          290 g          198 t
ORIGIN      
        1 tgactcgcct ccaggatatg gcccagatcg gcgatgaggc catcagagat gtcgattgtg
       61 cttgaggcga tcgcccgcaa gatcagacct tccgatacac ggggtgaggg tctatagagg
      121 cgccccaaaa gatacgggcg atacgtatcg gtaagttcag ccaaccgcgg ggtaagcgcc
      181 aaagccgcat cgcccaaggt tccggtgaca tagatgtaat gaccggcttg ggctccgctg
      241 cgcctgagcg cccggccttc ggggacaaat ccatgcatct gtacagtaat gctcaaaggc
      301 ccgcgggtga ggtcaccacc gatcagcgct accgagaatc gctgcgccaa ctcgaaaaac
      361 ccgtgcgcaa aggccgcaag ccacgcttcc tcggcttgag gtaaggtcaa tgccatcgtg
      421 gcccaggctg gacgcgcgcc catagctgcc agatcgctta aattgaccgc caaggcctta
      481 tagcctaaat cctctggggg gatatcttca gagaaatgca cgcccgcaac caaggtgtcg
      541 ctggtcaaca ccagttccac cccgggcggt acccgcacca cggcgccatc atcgccgatg
      601 cccacgatga cgtcctggcg ctgttcgatc gacctctcga aatacctatg gatcagatca
      661 aactcgccaa gcggcatagg tcggtcatgg gatcgaagcg atctcgtgtg gccgcaagag
      721 gcgtgctact ttatcgagga ccccattgat gtatttatgg gccttggtag cgccgaatat
      781 cttggtgagc tctaccgcct cgttgatcac tacccgccac gggatctccg ggtgaaacct
      841 aagctcatag accccgatcc acagcaccgc acgctcgacc ggatccagct catggatcgg
      901 ccggtcgagg acaccgatga gcggttgttc caggataccg atatgggtag ggatctcgcg
      961 ggtcaagcac tggaaatagt ccatatcgac cttaatgagc tcacgctcgg ctatgaattc
     1021 accgaggatc tgat
//
LOCUS       DASQSL010001037         1682 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_88590, whole genome shotgun sequence.
ACCESSION   DASQSL010001037 DASQSL010000000
VERSION     DASQSL010001037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1682
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88590"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..251)
                     /locus_tag="VE844_10715"
     CDS             complement(<1..251)
                     /locus_tag="VE844_10715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011330929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HZC01805.1"
                     /translation="MSKGKFERTKPHVNVGTIGHVDHGKTTLTAALTLITSRRFGGEY
                     RAYESIDNAPEEKARGITIATAHVEYQSEQRHYAHVDCPG"
     gene            complement(329..404)
                     /locus_tag="VE844_10720"
     tRNA            complement(329..404)
                     /locus_tag="VE844_10720"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(369..371),aa:Thr,seq:ggt)
     gene            complement(412..485)
                     /locus_tag="VE844_10725"
     tRNA            complement(412..485)
                     /locus_tag="VE844_10725"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(451..453),aa:Gly,seq:tcc)
     gene            complement(532..614)
                     /locus_tag="VE844_10730"
     tRNA            complement(532..614)
                     /locus_tag="VE844_10730"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(578..580),aa:Tyr,seq:gta)
     gene            complement(708..>1682)
                     /locus_tag="VE844_10735"
     CDS             complement(708..>1682)
                     /locus_tag="VE844_10735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01806.1"
                     /translation="PKDGGRLHYTFRVDHRRDNQSYDSRLTDRWALFRGDDLIPPARV
                     RTLKGAESRAYLQLQLPAKWSAALPYPQTAEGTYTIDHPKRRFDRPIGWMVAAERLGI
                     LRERVVGMQVAIASPVGQGLHRQDILALLRWTLPVLQNIFKTLPDRLLVVGAGDPLWR
                     GGLSGPRSLFIHADRPLITAKGTSPLLHEIIHTVMQARSGRGGDWIIEGLAELYSLEL
                     LVRSGTISHERYTKTLAKLEQRGQGVTKLRLRSSSGAVTARAVSILHKLDQQIREKTS
                     DKVSLDDVLRAMAAAPRAWTTTRFRQLCERIAGISLEAFFEQWVPKPS"
BASE COUNT          392 a          481 c          443 g          366 t
ORIGIN      
        1 cccggacagt ctacatgcgc atagtgccgc tgctcactct gatactccac atgcgcggtg
       61 gcaatcgtga tcccgcgcgc cttctcctcg ggcgcattgt caatactctc ataggcccga
      121 tactccccac caaatcggcg cgaggtgatc aacgtcagcg ccgcggtcag cgttgtcttc
      181 ccatgatcca catgaccaat cgtcccaaca tttacatgcg gcttcgttcg ctcaaatttc
      241 cctttggaca tcttaaggtc tcccgaaaac tgggcattaa cccggactca tcatccaact
      301 ttagtaattt aacttataac acaagcattg gagcccataa ccggacttga accggtgacc
      361 tcttccttac caaggaagtg ctctaccgac tgagctatat gggcgtaaac ttggagcggg
      421 tgatgggaat cgaacccaca ccatcagctt ggaaggctga ggttctacca ttgaactaca
      481 cccgcgcgta ttcatcccaa accccacata atcataaact attatacccg gtggaggggg
      541 gaggattcga acctccgaag gcttatgccg gcagatttac agtctgctcc cgttgaccgc
      601 ttgggtaccc ctccgaaaca taagcgagta attttctata atttacagat atatgtcaat
      661 tgtatgcgat aaagtaaagt gaaagtctat ttaatattga cagagcacta ggacggctta
      721 ggcacccact gctcaaaaaa ggcctccagg ctaatgccgg caatccgttc acagagttgc
      781 cggaagcggg tggtcgtcca ggctcgagga gcggcggcca tcgcccgcaa cacatcgtct
      841 agactcactt tatctgaggt tttttcacgg atctgctgat cgagcttatg cagtatgctg
      901 actgcgcggg ctgtgactgc acccgaggag gatcgaagcc gtagcttcgt gacgccttgg
      961 ccacgttgct ctagtttggc taaggtcttg gtataacgct catggctgat cgtacccgaa
     1021 cgcaccaaga gctcgagcga gtaaagctct gccagtcctt cgatgatcca atcgccgccg
     1081 cggccggagc gggcttgcat gactgtatgg atgatctcgt gcagcaaagg actggttcct
     1141 ttggcagtga tcaaaggccg atccgcatga ataaagagcg agcggggacc ggagaggcca
     1201 cctcgccaca agggatcgcc ggcaccgacc acgaggagcc gatcgggaag cgtcttaaag
     1261 atattctgca atactggcaa ggtccaacgc aaaagcgcca atatatcctg gcgatgtaag
     1321 ccttggccta ccgggctggc tatggccacc tgcatgccga cgacacgctc gcgcagtatc
     1381 ccgaggcgtt cagcggcgac catccagccg attggccgat caaagcgccg cttggggtgg
     1441 tcgatggtgt aagtcccctc tgccgtctgg ggataaggca gggcggccga ccattttgcc
     1501 gggagttgta gctgaagata ggcgcgggat tcagccccct tcagcgtgcg aacccgcgcc
     1561 ggaggtatca gatcgtcacc gcgaaacagc gcccacctat ccgtcaaacg gctatcgtaa
     1621 ctctgattat cgcgccgatg atccactcga aaggtgtagt gtaaccggcc gccatctttc
     1681 gg
//
LOCUS       DASQSL010001038         2062 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_168510, whole genome shotgun sequence.
ACCESSION   DASQSL010001038 DASQSL010000000
VERSION     DASQSL010001038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168510"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..183)
                     /locus_tag="VE844_10740"
     CDS             complement(<1..183)
                     /locus_tag="VE844_10740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZC01807.1"
                     /translation="MVEPIVKRCAGLDVHKMQVMVTVLLEQSDGQLQESTREFGTFRA
                     DCLALAEWLNSLNVELV"
     gene            complement(204..392)
                     /locus_tag="VE844_10745"
     CDS             complement(204..392)
                     /locus_tag="VE844_10745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01808.1"
                     /translation="MVVFDDSGKDPDCQLDPVALSVPPPLFHALSGIGRTVRWPAPVC
                     SGAWLFRRLAQALLLNPH"
     gene            complement(730..1857)
                     /locus_tag="VE844_10750"
     CDS             complement(730..1857)
                     /locus_tag="VE844_10750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01809.1"
                     /translation="MLPITCVPETLVKGMKSFREIFCRAEGFEHVCRFITGLILSPNK
                     TLQGIYDAQVWEGEAPSRRAMHEAVFESGWDSAALIQHHRTEVAQAYRGRGRQVISLD
                     WTLSHHERGPKIYAVTQGYDYVQRRTTLFQTVVTAVVSNSEWIDGLEIVAQDPNDLKA
                     EEAYLRATAKASYEQMGEAQQRLLELLHYYKHRLEYRKRTEIAVEIVRQLEAEGQFPQ
                     AHYAFDKGVLTLELTRLIESRGKHWVSEVEVSRHIQWQGRWRRVDEVAAELRHHHPES
                     FRPVKVSCRNGEEKVFFAFTQVIRLKRYGRKRLVIVHEREELTDAPRFLLTDAVHWES
                     GRVIQTWSYRWASEVFHEFGKQVCGLESSGARRKRSHATSG"
BASE COUNT          441 a          641 c          512 g          468 t
ORIGIN      
        1 gaccagttcg acgttcaggc tgttaagcca ctcagctaag gccaggcaat cagcgcgaaa
       61 agtgccgaac tcgcgggtgc tttcctgtaa ctggccgtcg gactgctcga gcagcaccgt
      121 gaccattacc tgcatcttat ggacgtccag acccgcacag cgttttacaa tcggttcaac
      181 catgttaagc tcctttgatt cgttcagtga gggttaagga gcagcgcctg ggcaaggcgt
      241 ctgaacagcc aggcacccga gcaaaccggg gccggccatc ttaccgtgcg tcctatgcca
      301 ctcagggcat ggaacagggg tgggggtacg ctcagcgcca ccgggtccag ttggcagtca
      361 gggtctttgc cactatcgtc gaacacgacc acggtcaggt gctgctctaa ctttccgttt
      421 tagcaaagat ccagcagatt ttcatgcgcg ggggtggcca atgccgcggc catgaacgtt
      481 ggaaggttag tgattttgta gaccgagaag acctgaacgt atcaggctgg catcaatact
      541 cccagcactt catcgcagga ttttccttcg gcaaaatacc gcttacttag ctccagcaga
      601 gaacgaagta cttcccggcc aatcgctcgg cacttctgac cgtaggtttt cttccctgtg
      661 gcaaacgcgt atcttcggat ttcgactctg caacaggcgc gcgttggatc aaggactgcg
      721 ccacgcaact caaccggaag tggcgtgtga ccgcttcctc cttgcccctg atgactccag
      781 tccacacacc tgcttgccga actcatgaaa gacctctgac gcccaacgat aactccaggt
      841 ctgaatcact cgcccgcttt cccaatgcac ggcatcggtg agcaaaaaac ggggggcatc
      901 ggtcaactcc tctcgttcat gtacgatcac caagcgcttg cgtccatacc gcttcagccg
      961 gatcacctgg gtaaaggcaa agaacacttt ctcctcgccg ttacggcagc tcaccttcac
     1021 cggccggaaa ctctctgggt ggtggtgtct caactcggcg gccacttcat ccacgcgccg
     1081 ccatcggccc tgccactgaa tatggcgcga aacctccacc tcactgaccc aatgcttacc
     1141 gcgactctca atcagacgcg ttaactccaa cgtcaacacc cccttatcaa aagcgtagtg
     1201 ggcctggggg aactggcctt cagcctcaag ctggcgcacg atctccacgg cgatctccgt
     1261 ccgtttgcgg tactccaacc gatgtttata gtagtgtaac aactccagca agcgctgctg
     1321 cgcttcaccc atctgctcat agctggcttt ggctgtcgct ctcaaatagg cctcctccgc
     1381 tttcaagtcg ttcgggtcct gggccacgat ctcaaggcca tcgatccatt cgctattgga
     1441 caccaccgcg gtcactactg tctgaaacag ggtcgtccgt cgctgtacgt aatcataacc
     1501 ctgggtaacg gcgtaaatct tggggccacg ctcgtgatgg gaaagcgtcc aatcgagcga
     1561 gatcacttgg cggcctcgcc ctcgataggc ctgagcgact tctgttcggt gatgctggat
     1621 gagagctgcc gagtcccagc ccgactcaaa gaccgcttca tgcatggcac gacggctggg
     1681 cgcctcgccc tcccacactt gggcatcgta aatcccttgg agcgttttgt tggggctgag
     1741 gatcagacca gtaataaacc ggcagacatg ctcaaatcct tcagcccgac aaaagatctc
     1801 cctaaagctt ttcattccct tgacaagggt ctctggcaca caggtgatcg gcagcatggc
     1861 tccacctttc tttttctatt tccacacccc ttattctttc accatccacc tgttttctcc
     1921 aataaccttc caagtcgtgt cgatctcatt gtgatcggca gccttgagtg gaaactcgag
     1981 cgcctcgccc ttccgtaaag taatcctcac tgtaggcaga gaggtaattg ccatcgggcc
     2041 ccagatggtt gtacacgacg tc
//
LOCUS       DASQSL010001039         1254 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_76311, whole genome shotgun sequence.
ACCESSION   DASQSL010001039 DASQSL010000000
VERSION     DASQSL010001039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76311"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            244..>1254
                     /locus_tag="VE844_10755"
     CDS             244..>1254
                     /locus_tag="VE844_10755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01810.1"
                     /translation="MSRAKRYARKQAKARQRRRQNALERLERDRRQAQQAAEALHQAL
                     DELGLPDGLIREIEGRLRSQHQLLGKIIGVMFPALFGCRTPSELCRVRGWDKNWPSRL
                     LRALPKRSWLKRLRRLGRDVLVPLWRHVERKSEATRSRWQWTWAVDDSVFHKYGEQLG
                     LVGHGWSGQQHRVLSGIDGLLLVVVVGDGKLVVPVDFAIRRPTHSGPGAPCWDKLNWA
                     RTLIEGRLDAFRKRGLDLPPAIITADSWFSDSKLMTHIRNQHQGTFLVEGKVTYTFTL
                     ADGRHVNGRDFLEGPWSWRYHPWERGVRYVRLQAQSPTYGAVTVVIVDEAGQDRFYLL
                     CLE"
BASE COUNT          254 a          351 c          376 g          273 t
ORIGIN      
        1 agcgcccgtt gttcaataat ctctgtattg tatgatcctg gcttttccgt acctcaattt
       61 tagcgagtac gcgcgcggct ctccgcccgc taccctatga aagctattca ttccaaaggg
      121 attatagaca catataggac gcctacatcg gcgaccttgg acgacgcttg aaatcaaggc
      181 gcggtgggac atggtttcct gggtatccaa aatcaaactc atcacgatac ccaggagatc
      241 atcatgtccc gagccaaaag atatgccaga aaacaagcta aagccagaca gcgccggcgc
      301 caaaacgctc tggagcgcct cgaacgcgac cggcgccaag cccagcaggc cgccgaagct
      361 ctgcatcaag cccttgacga gctgggcttg cccgatggct tgatccgcga aatcgaaggt
      421 cgtttacgca gccagcacca gctcttgggt aagatcatcg gggtgatgtt tccggccctc
      481 tttggatgtc gtaccccctc ggagttgtgc cgggtgcgag gctgggacaa gaactggccg
      541 tcgcgtctgc tcagagcgct gcccaaacgc tcctggctca aacgcttgag gcgtctggga
      601 cgtgatgtct tggtgcctct ttggcgtcat gtcgaaagga aaagtgaagc gacccgaagt
      661 cgttggcaat ggacctgggc cgtcgatgac tcggtcttcc acaagtatgg cgaacagttg
      721 ggactcgtgg ggcacgggtg gagcggtcag cagcatcggg tcttatccgg cattgatggg
      781 cttttactgg tggtggtcgt tggcgatggc aaattggtgg tgccggtcga ctttgccatt
      841 cggcgcccca cccacagcgg gccaggtgca ccgtgctggg acaaattgaa ttgggcgcgc
      901 accctgatcg agggtcgact cgacgcgttt cgaaagcgtg ggctcgacct gccgcctgcg
      961 atcatcacgg ccgatagttg gtttagcgac tccaagttga tgacccacat tcgcaatcag
     1021 catcagggca ccttcttggt cgagggcaaa gtcacctata ccttcaccct ggccgatggt
     1081 cgacacgtca acggccgcga tttcctggag ggtccatggt cctggcgcta ccatccctgg
     1141 gagcgtgggg tgcgctatgt gcgcttgcag gctcagagcc cgacttatgg cgcggtgacg
     1201 gtggtaattg tcgacgaagc cggccaagat cgcttctatt tgctgtgctt ggag
//
LOCUS       DASQSL010001040         2163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_8523, whole genome shotgun sequence.
ACCESSION   DASQSL010001040 DASQSL010000000
VERSION     DASQSL010001040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2163
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8523"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            395..1462
                     /gene="ltaE"
                     /locus_tag="VE844_10760"
     CDS             395..1462
                     /gene="ltaE"
                     /locus_tag="VE844_10760"
                     /EC_number="4.1.2.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013568738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="low-specificity L-threonine aldolase"
                     /protein_id="HZC01811.1"
                     /translation="MPALTKRIIDLRSDTVTKPSPAMCQAMAAAEVGDDVFGEDPAVN
                     ELQEKVAKLFGREAALFVPSGVMGNQIAIKVHTRPGDEVILEESCHIFNHEMGMMAAF
                     AGVIPRPIPTQDGFLTARDIKRAIRPKLYYLARTGLITLENTHNMKGGRIYPLAQMRE
                     VLELAHSEGIPVHLDGARIFNAAVATGKPVQELTQDFDSVMFCLSKGLGAPVGSMLVG
                     SNAFIEQARRIRKMLGGGMRQVGVLAAAGLYALEYNLEKLKEDHQKAQLLASELRKIR
                     EVVLEPVETNIVIFEIRSMATSELVAKLGERGVLCLSIGPNQIRLVTHLDVSRQDVLE
                     AARHIRELADKILFVGGNQAE"
     gene            1532..>2163
                     /locus_tag="VE844_10765"
     CDS             1532..>2163
                     /locus_tag="VE844_10765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012942233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZC01812.1"
                     /translation="MLSRRVLSQTGKVVDEAAIEKFRSSLRGDLIRPGDQGYDTVRKI
                     FNAMIDRRPSLIARCAGLVDVIAGVNFARDHNLVLAVRGGGHNVAGNAVCDGGIVVDL
                     SLMKGICVNPARRTVRAEGGVIYGELDRATQSHGLATTGGEVSTTGIAGLTLGGGFGW
                     LMGKHGLACDNLLSVELVTAEGKPITANAEQNSDLFWGIRGGGGNFGIVTS"
BASE COUNT          509 a          551 c          654 g          449 t
ORIGIN      
        1 atagatagac tcctttgtga tcctctctag cggagagagg actagagcgt gtttaaaaat
       61 agcatcggcg tgttctgtca tagcgctacc tctatcttcg taaaggccag catgccatct
      121 cgttgggatg cacagcgctg atgggtatgg ataataatcc ctcatgagta taacctagca
      181 tggcgcaagc gcgtggatcc gcctcgagga tccgatcctg cgtggggtca atgatgaata
      241 tcgcatcatt ggaatattca aagatctgga gctatacgat ctctgctttg gacctacact
      301 gaaaaagatc aagaaggtag acgctcacac agtaaaagag atccaacgag ccggggacaa
      361 tcgacgaaga agtcttaaaa tccatgagaa gacgatgcca gcgctgacca aacgcattat
      421 cgacctacgt agtgatactg tcaccaagcc ctcgccggcg atgtgtcaag cgatggcggc
      481 cgccgaagtg ggcgacgacg tcttcggcga agatcctgcg gtcaatgagc tccaagaaaa
      541 ggtggcgaag ctctttggac gagaggccgc gctcttcgtt ccctcggggg tgatgggcaa
      601 ccagatcgcg atcaaggttc acactaggcc tggcgatgaa gttattctcg aagaaagttg
      661 tcatatcttc aaccacgaga tggggatgat ggccgctttt gcgggtgtga tcccgcgccc
      721 cattcccacg caagacggtt ttctcacggc gagagacatt aagcgagcca ttcgtcccaa
      781 actctattat ctggcgcgga caggtttgat tacactcgaa aacacgcaca atatgaaggg
      841 tggccggatt tacccactgg cgcaaatgcg cgaagtcctc gaattggccc attccgaggg
      901 aattcccgtc catttagacg gggcgcgcat cttcaacgcc gcggtcgcga caggaaagcc
      961 agtccaggag ctgactcagg actttgattc ggtgatgttc tgcctttcta aggggctggg
     1021 cgcaccggtg ggctcgatgc ttgtgggcag caacgcattt atcgagcagg cacgacgtat
     1081 tcggaaaatg ctgggcggtg ggatgcgcca ggtcggtgta ctagccgccg cagggctcta
     1141 cgcgcttgaa tataacctcg aaaaactcaa agaggaccac caaaaagcgc aattactcgc
     1201 gagtgagctg cgcaaaattc gagaagtagt actggagccg gtcgagacca atatcgtcat
     1261 cttcgagatt cgatcgatgg caacgtcaga attggtcgct aagctgggcg agcggggcgt
     1321 tttatgcctt tccatcgggc ccaatcaaat tcggctggtc acgcacttgg acgtaagccg
     1381 tcaagatgtg ctcgaagcgg cgcggcacat tcgcgaactg gcggataaaa tcctattcgt
     1441 tggtggcaac caagcagagt aagaggtgta agatggcgga cggcaaagcc cagcgagacc
     1501 tgccgtccgg gcgaaggaaa ggagctaagt catgttgagc cggagagtcc tctcccagac
     1561 tggaaaggtc gttgacgaag cagccatcga gaaattcagg agcagtctgc ggggcgatct
     1621 gatccgcccc ggtgatcaag gttatgacac tgtgcggaag atcttcaacg cgatgataga
     1681 tcgacgccca tcgctgatcg ctcgctgcgc cggattggtc gatgtcatcg ctggggtgaa
     1741 cttcgcccgc gatcataacc tggttctggc ggtgcggggt ggtggccaca acgtcgccgg
     1801 aaacgcagtc tgcgacggag gtatagtcgt cgacctctcc ctgatgaagg ggatctgcgt
     1861 taatcccgcg cggcgaacgg tccgtgcgga gggcggcgtt atctatggcg agctcgaccg
     1921 tgcgacacaa tcgcatggat tggcgactac tgggggtgag gtgagcacca cggggattgc
     1981 cggtctgacg ctcggcggtg gcttcggctg gctgatgggc aagcatggtc tggcttgcga
     2041 caatctcctg tccgtggagc tcgtgaccgc ggaaggaaaa cccatcaccg ccaatgctga
     2101 gcaaaattca gatctctttt gggggatccg gggtggcggc ggaaacttcg gaatcgtcac
     2161 ctc
//
LOCUS       DASQSL010001041         1035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_158490, whole genome shotgun sequence.
ACCESSION   DASQSL010001041 DASQSL010000000
VERSION     DASQSL010001041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158490"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1017)
                     /locus_tag="VE844_10770"
     CDS             complement(<1..1017)
                     /locus_tag="VE844_10770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013292691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HZC01813.1"
                     /translation="MAANDERSCTHTSHREVINTDPVCGMKVSEDSQFRYDYQDKTFL
                     FCCAGCLTRFQSSPERYLTATPVLPATEPSGPSEEEIGPAIGTEYICPMHPEVVRQAP
                     SVCPICGMALEPRTVTVEEQNPELEDMTQRFWGSVILGSPVVVLAMLIELAPNITQGI
                     PMRLLQFVEFFLATPVILGGGLPFFLRGWDSLVRRNLNMFTLIALGLGAVLIYSTVAM
                     VAPELFPLSMRGKGGTVPVYFEAAVVITILVLLGQVLELRARHQTRAAIRALLGLAPK
                     TARRVQSDGTEVDIPLEHVRPGDILRIRPGEKIPVDGEIVDGASAVDESMLTGESVPV
                     EKTTG"
BASE COUNT          223 a          307 c          301 g          204 t
ORIGIN      
        1 gccggtggtc ttctccaccg ggacgctctc accggtgagc atcgattcgt cgaccgcgct
       61 ggcgccgtcg acgatctcac cgtcgaccgg gatcttctca ccgggccgga tgcgcaggat
      121 gtccccgggc cggacgtgct ccaagggtat atccacttcg gttccatcgc tttgcaccct
      181 acgcgcggtc ttaggcgcaa gtcccaagag cgcccggatg gcggcgcggg tttgatggcg
      241 ggcgcgcagt tccaatacct gtccaagcag caccaagata gtgatgacca ccgcggcttc
      301 gaagtaaacc gggacggtgc cccctttccc gcgcatcgat agggggaaga gttccggtgc
      361 gaccatcgcc accgtgctgt atatcaaaac ggcgccgagc cccaatgcga tcagcgtgaa
      421 catattgagg ttacggcgta ccagcgaatc ccagccgcgc aggaaaaagg gcaggccgcc
      481 gcccaaaatg acgggggtag ccaaaaaaaa ctcgacaaat tgcaagagcc gcatcgggat
      541 cccttgggtg atgttcggtg caagctcaat caacatagct aaaacaacca caggcgagcc
      601 caggatcaca ctgccccaga agcgctgcgt catatcttca agttccgggt tttgttcttc
      661 gaccgtgacc gtcctgggtt ctaaggccat gccgcagatc gggcacacac tgggcgcttg
      721 gcgcacgact tctggatgca tcgggcagat atactcggta ccgatcgccg ggccgatctc
      781 ttcctcgctc ggcccggaag gttcggtggc aggcaaaacc ggtgtggctg tcaggtagcg
      841 ttcgggcgag gactggaagc gtgtcaagca acccgcacaa cagaagagaa aggtcttatc
      901 ttggtagtcg tatctaaatt gactgtcctc agagaccttc atgccgcaga ccggatcggt
      961 gtttatcacc tcacggtgag aggtgtgagt gcacgaacgt tcatcattag ctgccatcgt
     1021 ttatctctct aaatc
//
LOCUS       DASQSL010001042         1050 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_60780, whole genome shotgun sequence.
ACCESSION   DASQSL010001042 DASQSL010000000
VERSION     DASQSL010001042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60780"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..331
                     /locus_tag="VE844_10775"
     CDS             <1..331
                     /locus_tag="VE844_10775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007515010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HZC01814.1"
                     /translation="SPTPFDALFASEGIDVIKIPPRTPRANCYAERFVRSVREECTDR
                     LLLYHERHARTVLDQYVRHFNDHRPHQSLNQHPPIHDPATVIPLNAPIRRHRILGGMI
                     NQYRRVA"
BASE COUNT          219 a          382 c          224 g          225 t
ORIGIN      
        1 ttcaccaacg cctttcgacg ccctcttcgc ctctgaaggc atcgacgtca tcaagatccc
       61 tcctcggacc ccgcgggcga actgctatgc cgagcgattc gtccgcagtg ttcgcgagga
      121 gtgcaccgac cggctgttgc tctaccacga acgacacgcc cgcaccgtcc tggaccagta
      181 cgtgcgtcac ttcaatgacc atcgtccgca tcagagcctg aaccaacacc cgccaatcca
      241 cgatcccgcc accgtgattc ccctcaacgc cccgatccgt cgccaccgaa tcctcggcgg
      301 aatgatcaac cagtaccggc gagtggcctg aaccgaccaa caaaacccct gatcacggta
      361 gacgtcgagt tttggcacgg tacaggcttc ctcgctgatt ttgtctcgtc cacacaactc
      421 ctcccataca tggttgattg ccggacgaca ctcgacggca cgtccccttc gctccaggcc
      481 cattacaggc ccttcatcac tactacaaga cgttccgccc tcctgacacg cacccagtac
      541 tccacggctt gtggattagc cacttgccga tctcccggcg ggtccccgct tcaatcaact
      601 gaaacccgaa tcgtgtcgag gagttctcct gtccgttgca aagcccaagc caagctcgcg
      661 ccatcttcat gccggacacc gccaaagcag taaacaggta tccctctggc ttatcccaag
      721 acagcattaa ggccccggtt ttgatgtcac ctagcttaac gacacgtcat cgatggttca
      781 ctttcgttcg ccttcttggc tcacacctgc cgtctttccc gacggctttt ccacagacgc
      841 tcaccaccat ggctcattca ccacagcagc tcgtggcggt ttgacaccag cacctgcatg
      901 ccgatgccga aggacctacc ttcatctctg caacagcatg gtcgctgttg atcattctgt
      961 cttctacatc agaacaaccc agctcccttc aggacacact aatgccctcg ctgaatcgtg
     1021 cactcatggc ctctggctgg tcataccgca
//
LOCUS       DASQSL010001043         3679 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_113686, whole genome shotgun sequence.
ACCESSION   DASQSL010001043 DASQSL010000000
VERSION     DASQSL010001043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3679
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113686"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1080)
                     /locus_tag="VE844_10780"
     CDS             complement(<1..1080)
                     /locus_tag="VE844_10780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020504215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HZC01815.1"
                     /translation="MLPQHILVVDDEPDICQLLKEILEDEGFEVSLAATAEQARQARR
                     ARRPDLVLLDIWLPDTDGIGLLKEWSEGDGLDVPVIVMSGHGTVETAVEATRLGAYDF
                     LEKPLSIAKLLLTMQRALEATALKRENIGLKRQTQSVNQPVGNSLALIRLREQIVRIA
                     AHQTSVFMIGEPGSGKELFARYLHANSPRAAGPFISVGVAALARENPAIELFGTEEAG
                     KVHFGWIEQANSGTLLLKDIADLDLSVQARLLGVLEHQSLLRVGGREPVIINVRIVAA
                     TRYNLQQPVQAGQFRDDLYYHLNVVPLHIPPLREHADDIPELLEYYIDHFTEQEGLPH
                     RRFTLNALRRLRGYEWPGNVRELKNL"
     gene            complement(1080..3338)
                     /locus_tag="VE844_10785"
     CDS             complement(1080..3338)
                     /locus_tag="VE844_10785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018233240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZC01816.1"
                     /translation="MNRRLTVLLAVATLSLLMLVSLVMMSSAMQNSERFGRFYSSLLI
                     VNALGLTTFMVLIGLNIRRLVRALRARRLGSRLTLRMLILFAALSVTPVLVVYGFSLD
                     FLHRGIDSWFDLRIEGALEDSLKLSRHALNQRRRELLRQTEQLAHELAEGSIGFTSLG
                     LEPLKDPASSVVSSATLPVNLNELRSRSGADELSLLTRQGGIIAFSSLHDIVPNLPSK
                     TILLQVQQGQSYAGLDPVGETALAVRIVVKVPDVGADNRLLQALYSLAPGISRLAAQV
                     QSAYSKYKELAYLREQLKISFTMTLTLVLLFTLASAIWAAFYSANRLVAPIQDLAEGT
                     KAVAQGDYSRELPVLSQDEIGFLVSSFNEMTRKIAIARDEAKQSRDQVDAQRAYLEAV
                     LGRLSSGVLTLDQDRYLCTANASASKILGVDLTLLIGESIATICARQPYLQAFQDILG
                     EDLISAPADWRKQVVLFGGSGRQVLMCRGTALSGAVPGQSGHIIVFDDITALLQGQRD
                     AAWSEVARRLAHEIKNPLTPIQLSAERLRHKYLAALPPKDAEVLDRLTHTIIQHVETL
                     KGMVNTFSEYARSPQMHPKPLNLNQLVEEVVDLYRSIDRQAVIAIELEPALPLVEGDV
                     GRLRQVLNNLIKNALEATEETAPPSIEISTRWVEEASHGFIELRIEDRGAGIPKALLN
                     QLFEPYVTNKPKGTGLGLAIVKKIVEEHGGVVWLENNVKRPGACAIIRLPVAAYQVTA
                     CALPAQASRNAL"
     gene            complement(3335..>3679)
                     /locus_tag="VE844_10790"
     CDS             complement(3335..>3679)
                     /locus_tag="VE844_10790"
                     /inference="COORDINATES: protein motif:HMM:NF025692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4390 domain-containing protein"
                     /protein_id="HZC01817.1"
                     /translation="VRQRRAYLWDSKVATISQRFRLKHHALSKQYVVTNLITDMRRNF
                     PSLDEAIAILGKIEGVPIIEQRLLNPDRSYQARIRARLDIESLPALLQPIAYFSSDWY
                     LSSPWYTWEIKP"
BASE COUNT          817 a         1024 c         1062 g          776 t
ORIGIN      
        1 cagatttttt aactcgcgta cattgccggg ccattcatag cctctcagtc ttctcagggc
       61 gttcagggtg aagcggcggt gcgggagccc ctcttgctct gtgaaatggt cgatgtaata
      121 ttcaagcagt tcagggatat cgtccgcatg ttcccgcaag ggcgggatgt gcagcggaac
      181 gacattgaga tgataataga gatcatcgcg aaactgacct gcctgaacgg gctgttgcag
      241 attatagcgg gtggcggcca caatgcgcac attgatgatc accggctccc tgccccccac
      301 gcgcagcaag gactgatgtt cgagtacgcc caagagccgg gcctgaacgc tgagatccaa
      361 gtcagcgata tccttgagca agagggtgcc gctattggcc tgttcgatcc aaccgaagtg
      421 caccttgccc gcctcctcgg tgccaaacaa ttcaatcgcg ggattctcac gggccagggc
      481 cgccacaccg acgctgataa aaggcccggc ggcgcggggg ctattggcat ggagatagcg
      541 ggcaaacagc tccttaccac tgccgggttc accgatcata aagacggagg tttgatgcgc
      601 cgcgatccgc acgatctgtt cccgcaaccg tattaatgcc aggctgttgc ccacgggttg
      661 gtttacgctt tgagtttgcc ttttaagccc gatgttctcc cgtttgagcg cggtggcctc
      721 caaggcacgt tgcatggtga gcaagagctt ggcgatcgat aagggtttct caaggaaatc
      781 ataagcccca agacgggtgg cctcgaccgc cgtttcgacg gtaccgtgcc cggacatcac
      841 gatgaccggc acatcgagcc cgtcgccttc cgaccattcc ttgagcaagc cgatcccatc
      901 ggtgtccggc aaccagatat cgagcaacac cagatccggc cgccgggcgc ggcgcgcttg
      961 ccgcgcctgc tccgccgttg cggcgagaga gacctcaaag ccctcgtcct cgaggatctc
     1021 cttgagcagc tgacagatat cgggctcatc atcgacaacc aatatatgtt ggggcaggat
     1081 cataaggcgt tcctagaagc ttgagctgga agggcgcagg ccgttacctg ataagcggct
     1141 acgggcagcc ggataatggc acaggcgcca ggtctcttga cattgttttc tagccatacc
     1201 acaccaccat gttcctccac gatcttctta acgattgcaa gccccaagcc cgtgcctttc
     1261 ggcttattgg tgacataggg ttcgaacagt tggttaagca gagccttcgg gatccctgcg
     1321 ccccgatctt cgatgcgtaa ctcgatgaaa ccgtgactgg cttcctcgac ccagcgggtg
     1381 ctgatctcta tagagggcgg tgcagtttcc tccgttgcct caagggcgtt tttaatgaga
     1441 ttattgagca cctgacgcaa ccgtcccaca tcgccctcga ccaatggcag ggcaggttcg
     1501 agctcgatcg caatcaccgc ctggcggtct atgctgcggt aaagatcgac gacctcttcg
     1561 accagttggt tcaagttgag gggtttagga tgcatctgcg gactgcgggc gtattcggag
     1621 aaggtgttca ccatcccctt gagggtttcg acgtgctgga tgatagtatg ggttaagcga
     1681 tccaacacct ccgcatcctt gggaggcaag gcggccaggt atttgtgccg tagccgctcg
     1741 gccgagagct ggattggggt caagggattt ttgatctcat gggccaaacg ccgggcgacc
     1801 tcactccagg ccgcgtcacg ctgtccctgc aagagcgcgg tgatgtcatc gaagacaatg
     1861 atatggccgc tctgccccgg gaccgcgccg gacaaagccg tgccacgaca catcaagact
     1921 tggcggccgc tgccgccaaa caataccacc tgttttcgcc aatcggcagg agcgctgatg
     1981 agatcctcgc ccaggatgtc ctggaaggct tgtagataag gttggcgggc gcagatcgta
     2041 gcgatggatt cgccgatcaa gagcgtgagg tcgacaccta agatcttgct ggcacttgca
     2101 ttggcggtac atagatagcg gtcctgatcc aaggtgagca cgcccgagga gagcctccca
     2161 aggacggctt ccagataggc tcgctgggca tcgacctggt cccggctctg cttggcctca
     2221 tctcgggcaa tagcgatttt acgcgtcatc tcattgaagg aggagaccag gaaaccgatc
     2281 tcatcttggc ttaagactgg aagctcgcgg ctataatcac cctgggctac cgcctttgtc
     2341 ccttcggcca gatcctgaat gggagcgacg agccgattag ccgaatagaa cgccgcccaa
     2401 atggcgctcg cgagggtgaa taacaacacc agggtcaagg tcatggtgaa gctgatcttc
     2461 aattgctccc ggagataagc gagttccttg tatttactgt aggcagactg gacttgcgcg
     2521 gcgagccggc tgatgcctgg agctaaggag tagagggcct ggagcagccg attgtctgcg
     2581 cccacatcgg gtactttgac tacaatcctg acagccaggg ccgtttcacc gactggatcc
     2641 aggcccgcat aactttgtcc ctgctgcacc tgcagcaaga tagtcttgct cggtagattc
     2701 ggcacaatat cgtgcaggct actgaaggca atgatccctc cctggcgggt caataatgat
     2761 aattcatcag caccgctacg gcttctcagt tcgtttagat tcaccggcag ggtagcactg
     2821 gaaaccacgc tgctcgctgg atctttgagc ggttcaaggc ccaaggaggt aaatccgatc
     2881 gaaccttccg ccaattcatg agcgagttgc tcggtttgtc tcaaaagctc gcgccggcgc
     2941 tgattgagcg catgcctgct cagtttcaat gaatcttcaa gggctccttc gatcctgagg
     3001 tcaaaccaac tgtctatccc gcggtggaga aaatccaggg aaaatccata gaccaccagc
     3061 accggggtga ccgacaaggc ggcgaagagg atcagcatgc gcagcgtcaa tcgggaccct
     3121 aggcggcgtg ctcgcaaggc gcggacgagc ctacggatat tgagaccaat gagcaccatg
     3181 aaggtggtta gccccagggc attgactatg agcaggctcg aatagaagcg gccaaaacgc
     3241 tcggaattct gcatggcgct gctcatcatg accagggaca caagcatcag aaggctcaag
     3301 gtagcaacgg ccaataatac ggtcagacgt cggttcatgg cttgatctcc cacgtgtacc
     3361 aagggcttga aagataccag tccgaggaaa aataggcgat aggctgtaac agtgctggca
     3421 gggactcgat gtcaagacgc gcccggatcc gggcctgata ggatcgatca gggttgagca
     3481 ggcgctgctc gatgatcgga accccttcga tctttcccaa gatagcgatg gcctcatcga
     3541 gtgaggggaa atttcggcgc atatcagtaa tcaggttagt caccacatat tgtttgctca
     3601 aagcatgatg cttaagacgg aagcgttggc tgattgtagc cactttggag tcccaaaggt
     3661 aggcacgccg ctgtctgac
//
LOCUS       DASQSL010001044         1085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_102987, whole genome shotgun sequence.
ACCESSION   DASQSL010001044 DASQSL010000000
VERSION     DASQSL010001044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102987"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..937
                     /gene="infB"
                     /locus_tag="VE844_10795"
     CDS             <1..937
                     /gene="infB"
                     /locus_tag="VE844_10795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002031107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HZC01818.1"
                     /translation="IATILIQNGTLKKGDILLTGQEFGRVRAMLDETGQEVEEAGPSI
                     PVEVLGISNTPNASDEATVIADERKAREIAQFRQGKYREGKLARQQAAKLDKIFSQME
                     EGKTHTLNLMIKADVQGSAEALVEALSKLSTEEVQVNVVASGVGGINESDIHLALASN
                     AIVIGFNVRADASARKLVEAEGVDLRYYSIIYTVIDEVKAAISGLLGPEIKETILGVA
                     EVRDVFRSSRFGAIAGCIVSSGVVRRNSPVRVLRDHVVVFEGQLQSLRRYKEDVNEVK
                     AGIECGIGIKNYNDVKVGDQIEIFERIEVARSSQH"
BASE COUNT          261 a          253 c          336 g          235 t
ORIGIN      
        1 tatagcgacg atcctgatcc aaaacggtac tctgaaaaag ggcgatatcc tattgaccgg
       61 acaagagttt gggcgcgtgc gggcgatgtt ggatgagacc ggccaagaag tggaagaggc
      121 aggtccttcc ataccggttg aagtcttagg gatctccaat acgcccaatg ccagcgatga
      181 agcgacggtt attgctgatg agcgtaaggc acgggagatc gcccagttcc gccagggcaa
      241 gtatcgtgag gggaaattgg cgcgccagca agcggcgaag ctcgataaga tcttctcgca
      301 gatggaggaa ggcaagaccc ataccttgaa tttgatgata aaggccgatg tacaaggttc
      361 cgccgaggct ttagtggaag cgctgagcaa gctctctacg gaggaggtgc aggtcaatgt
      421 ggtcgccagt ggtgtgggtg ggatcaatga atccgatatc catctggcgc tggcctccaa
      481 tgccatcgtg atcggcttta atgtgcgcgc cgatgcgagc gcccgtaagc tcgtcgaggc
      541 ggaaggtgtg gatctgcgct attacagcat catttacacc gttatcgatg aggtaaaggc
      601 cgccattagc ggcctgctgg ggccggagat caaggagacc atcctgggag tggccgaggt
      661 gcgcgacgtc ttccgttcct ctcgattcgg cgccatcgcg ggttgtatcg tctcaagcgg
      721 tgtggtgcgg cgtaactccc cggtccgtgt attacgcgac catgtcgtgg tctttgaagg
      781 gcaactgcaa tccttgaggc gctataaaga agatgtcaat gaagtgaaag ccggtatcga
      841 atgcggtatt ggcataaaaa actacaacga tgtgaaagtg ggggatcaaa ttgagatatt
      901 cgagcgcatt gaggtggctc gtagcagtca gcattagttt tttcgatgcc cactgaattt
      961 agccggcact tacgcgtcgc tcaggagctt aaacgtattt tggcgccctg gatacaacaa
     1021 caggccaaag acgcacagct tgggatggta accatcaccg cggtagaggt gacgccagac
     1081 ttacg
//
LOCUS       DASQSL010001045         1907 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_8576, whole genome shotgun sequence.
ACCESSION   DASQSL010001045 DASQSL010000000
VERSION     DASQSL010001045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1907)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1907)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1907
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8576"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1337
                     /locus_tag="VE844_10800"
     CDS             <1..1337
                     /locus_tag="VE844_10800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011697949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HZC01819.1"
                     /translation="PQRRKPQERKIYHTKVVKTHPDTDIARTLGFNDVNRDRKRLKRW
                     GIIAILGVLVVSVGLMMKYQVLSTRPSQLKTVEVQRGSLTVTVTATGTLKPINQVNVG
                     SELSGTIETVEVDYNDRVKQGQILARLNTDELKAKLQQSKAALESEQAKLQVARATLR
                     EARLRFQRTEQLTAKGLLPTQDLDTAIAAYLRAQAEEASTKAQIALTRATLNADQTNL
                     DKAVIHSPIDGIVLARKVEPGQTVAASFQTPVLFTLAEDLTRMVLHANIDEANVGPIK
                     KGQDATFTVDAYPNRKFPAKIMSIRNTPRRGEGIVTYETLLSVDNSELLLRPGMTATV
                     DVTTHRVTDAILVPNSALRFTPPWTNQATASDAPLSKGHKQLVWTLRDGRPVPIPVTV
                     GLSDRHNTEILAKDLKPGLPLLVEVVRPDGAGGGPAGGSFQRDNRGHKGEKG"
     gene            1324..>1907
                     /locus_tag="VE844_10805"
     CDS             1324..>1907
                     /locus_tag="VE844_10805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011418403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZC01820.1"
                     /translation="MKRGNNQSLIQLRDVTKVYGEGQTEVRALTGIDLQIDEGEFMAV
                     MGPSGSGKSTCMNILGCLDIPTSGTFFFRGLEVGKLTRDQRALLRRHYLGFVFQNFNL
                     LGRMSALENVELPLIYRSIPASERHARALEVLTALGLEGREKHTPVELSGGQQQRVAI
                     ARAIVTDPAILLADEPTGNLDSVHSREIMELLTQ"
BASE COUNT          439 a          564 c          547 g          357 t
ORIGIN      
        1 gtccgcagag gagaaagccc caagagcgga agatttatca taccaaggtg gtcaagaccc
       61 atccggatac cgacattgct cgaaccttgg gtttcaatga tgtcaaccgc gaccgaaagc
      121 gactaaagcg atggggcatc atcgcgatcc ttggagtttt ggttgtgagt gtagggctta
      181 tgatgaagta tcaagtcctt agtacacgcc cgtcgcagct caagaccgtt gaggtacaac
      241 gtggcagttt gaccgtcacg gtcactgcaa caggcacact gaagcccatc aaccaggtga
      301 acgtgggcag cgagttgtcc ggcaccatcg agacggttga agtggactac aacgaccggg
      361 tcaagcaggg ccagatactg gccaggctga acaccgatga gctcaaggcc aagctccagc
      421 aatccaaggc cgcgctcgaa tcggagcagg ccaaactaca ggtggcaagg gcgactctta
      481 gggaagcaag attgagattc cagcgaacgg agcaactcac cgcaaaaggg ctcttgccca
      541 cgcaagatct cgataccgcg atagccgcgt atctgcgtgc ccaggccgag gaggccagca
      601 ccaaggcaca gatcgccctc acccgggcga ccttgaacgc cgatcagacc aatctggaca
      661 aagcggtgat ccactcgccc atcgatggca ttgtccttgc ccgcaaggtc gaacccggcc
      721 agacggtggc tgcctctttt cagaccccag tactgttcac cttggccgaa gacctcacgc
      781 gcatggtgct ccacgccaat atcgatgaag ccaatgtggg cccaatcaaa aaaggacagg
      841 atgcgacctt tacggtcgac gcctacccga atcgcaagtt cccagcgaaa atcatgtcga
      901 ttcgaaatac cccgcgaaga ggggaaggga tcgtgaccta tgagaccttg ctcagcgtcg
      961 acaactcgga actgctgctg cgtccgggca tgaccgctac ggtcgacgtc acgacgcata
     1021 gggtcacaga cgctatcctg gtgcccaaca gcgcgctgcg ttttaccccg ccctggacca
     1081 accaggcgac cgcctctgac gcgcccttat ccaagggtca taagcaactc gtctggaccc
     1141 tccgtgatgg gcgacctgtc cctatcccgg tgaccgttgg actttccgac cgccataata
     1201 cggaaatcct agccaaagat ctcaagcctg ggctgccgct cctggtcgag gtagtcaggc
     1261 cagacggagc tgggggcggg ccagctggtg gttcgttcca acgggataac cgaggtcata
     1321 aaggtgaaaa ggggtaataa tcaatccctt atccagctgc gtgacgtgac caaggtctat
     1381 ggcgaggggc agaccgaggt gcgggcgttg accggcattg acctgcagat tgatgagggc
     1441 gagttcatgg ccgtgatggg accgagcggg tcggggaaat cgacctgcat gaacatcctc
     1501 ggttgcctgg atatccccac ctcaggcacc tttttctttc ggggcttgga agtcggcaag
     1561 ctaacccggg accagcgcgc cttgttgcgt cgtcactatc tcggctttgt ctttcagaac
     1621 ttcaacctcc ttggccggat gtcggctttg gagaacgtgg agctgccact gatctatcgc
     1681 agcatcccag cctccgaacg gcatgcgcga gcccttgagg tccttacggc cttgggcctc
     1741 gaggggcggg aaaagcacac ccccgtagag ctttccggcg gccagcaaca acgggtcgcc
     1801 attgcccgcg cgatcgtgac ggatccagcc atcctcttgg cagatgaacc caccggcaat
     1861 ctggattccg tgcatagtcg agagatcatg gagcttctga cccaatt
//
LOCUS       DASQSL010001046         1868 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_145319, whole genome shotgun sequence.
ACCESSION   DASQSL010001046 DASQSL010000000
VERSION     DASQSL010001046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1868
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145319"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            130..939
                     /locus_tag="VE844_10810"
     CDS             130..939
                     /locus_tag="VE844_10810"
                     /inference="COORDINATES: protein motif:HMM:NF015038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01821.1"
                     /translation="MEQAQAQGLSSPKERTGMHTTALAVQMGEHTAILYYSSRRHAGE
                     NLQALLDKREVDLAKPLAMSDALSSNEVVDESMLIRCHCLAHGRRQFSDLEEVFPHEC
                     KVVLDVISQVFDHDEQARADGLGAKARLAYHQTQSQPLMDELKGWLTQQVDHRLVEPN
                     SSLGKAIGYMQRRWESLTRFLWVPGAPLDNNLAERVLKLFIRQRKNSLFYQNEHSAYI
                     ASVLTSLIATCIYAGVNAVEYLVALQENRREVFADPAAWLPWVYASSRAAP"
     gene            complement(936..1286)
                     /gene="tnpB"
                     /locus_tag="VE844_10815"
     CDS             complement(936..1286)
                     /gene="tnpB"
                     /locus_tag="VE844_10815"
                     /inference="COORDINATES: protein motif:HMM:NF017528.4"
                     /note="TnpB, as the term is used for proteins encoded by
                     IS66 family insertion elements, is considered an accessory
                     protein, since TnpC, encoded by a neighboring gene, is a
                     DDE family transposase; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HZC01822.1"
                     /translation="MIQLTPQSRIFVATEPVDFRKGIDGLGAVCQQVLGDNPLEGAVY
                     VFRNRSGSAIKLLLYDGQGYWMMMKRLSTGRFSWWPQSPDARVPLSARELIILTWNGD
                     PERAQMAKDWRRVA"
     gene            complement(1321..1698)
                     /locus_tag="VE844_10820"
     CDS             complement(1321..1698)
                     /locus_tag="VE844_10820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01823.1"
                     /translation="MMQIDTPLHAEHQLDQLAAQFEHWRQSRLHPHDRIPEALWDQAV
                     ALTQTLSPSRVAKHLRLGVSDLKQHIAKRQGQAAAHRSVAPGFVEVPGPGAMTQTLSG
                     MEVELTAPMAPVCAFIHLTPHCP"
BASE COUNT          401 a          515 c          585 g          367 t
ORIGIN      
        1 gagatcgtgg gcgactgcgc ctacaaagtg tttgaagcga tggagcgtga ggccgcgcag
       61 ggcgaactca tctttcaaga cgacacagcg gttcgcatct tatcgctgat gcaggaaaac
      121 cgctgatttt tggagcaggc ccaggcgcag gggttgtctt cacccaaaga acgcaccggc
      181 atgcatacca cagcgctggc ggtgcagatg ggtgagcaca ccgccattct ctattactca
      241 agccgccgcc atgcgggtga aaaccttcag gcgttgctcg acaaacgcga ggtggacctg
      301 gctaaaccgc tggccatgtc cgatgcgctt tcgagtaatg aagtcgttga tgaatcgatg
      361 ctgattcgct gccactgcct ggcgcacggc cggcgccagt ttagcgacct ggaagaggta
      421 tttccacacg aatgcaaagt ggtgctcgac gtcatcagcc aggtgttcga tcacgacgaa
      481 caagcacgag cggatgggct gggcgccaag gcgcgcctgg cataccacca gacgcagagc
      541 cagccgctga tggacgagct caaagggtgg ctcacccagc aagtggacca ccgtcttgtg
      601 gagcccaata gctcccttgg caaagccatt ggctacatgc agaggcgctg ggaaagcctg
      661 acgcgattct tgtgggtccc gggtgcgcct ctcgataaca atttggccga gcgcgttttg
      721 aagctgttca ttcggcagcg caaaaactcg ctgttttacc aaaacgagca cagcgcttac
      781 atcgccagcg tgctcacgag cctgattgcc acctgtatct atgcgggggt gaatgccgtc
      841 gagtacctgg tggcgctgca agagaaccgg cgtgaggtgt ttgcggaccc ggcggcgtgg
      901 ctgccgtggg tctatgcctc aagccgggcc gcgccttagg ccacgcgtcg ccagtctttg
      961 gccatctggg cacgctcggg gtcgccattc caggtcaaaa taatcagctc tcgagccgac
     1021 agaggcacgc gtgcgtccgg gctttgaggc caccacgaaa agcgccccgt tgagagtcgc
     1081 ttcatcatca tccaataacc ctggccgtcg tagagcaaga gtttaatggc gctgcccgag
     1141 cgatttcgaa agacatagac ggcgccttca aggggattat cgcccagaac ctgttgacac
     1201 acggcgccga ggccatcaat gccttttcgg aagtcgaccg gttcggtggc gacaaagatg
     1261 cggctttgcg gagtgagttg gatcatcagc gggcctccaa aaagctctgg acgatggcgg
     1321 ctaggggcag tgaggcgtca ggtgaatgaa ggcgcagacg ggcgccatcg gggcggtgag
     1381 ttcgacttcc ataccgctca gcgtctgggt catggcaccg ggcccgggca cttcaacaaa
     1441 gcctggagca acggacctgt gtgcggctgc ctggccctgg cgtttggcga tgtgttgttt
     1501 gaggtcgctg acgcccaatc gcaagtgctt ggccacgcga gagggtgaca gcgtctgggt
     1561 caacgccacg gcctgatccc aaagcgcctc gggaatgcgg tcgtggggat gcaagcggct
     1621 ctggcgccag tgctcgaact gggcggcgag ttggtcgagt tggtgctcgg cgtgtaacgg
     1681 ggtatcgatc tgcatcatgg cctccaatca aagggtgttc ttctttaata agaatgactg
     1741 taggccatgg acaatcgtat ttcacgcatg ccagtcggaa gcagaccaac aagctgaatc
     1801 cctacgacaa cacattacgt attatggtga tgatgaaacg ccaaattttc aggaaatccg
     1861 gcagcgag
//
LOCUS       DASQSL010001047         1279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_8610, whole genome shotgun sequence.
ACCESSION   DASQSL010001047 DASQSL010000000
VERSION     DASQSL010001047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1279
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8610"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(399..755)
                     /locus_tag="VE844_10825"
     CDS             complement(399..755)
                     /locus_tag="VE844_10825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01824.1"
                     /translation="MDDVVALGDRSQSGSGLGAGRRGRAEGPADLIAASAGLFAVVDE
                     DKQVLSAGCTGHDTLDLSADHGVVTNSVYTRHERLVAELGSGSGRMLDDPAEPILLGL
                     TLGVDVYLLIRVAVST"
BASE COUNT          267 a          363 c          386 g          263 t
ORIGIN      
        1 gccctctccc ttgctccggg ctttttagtg gctcaagcaa ccgctcgtaa ttttgattca
       61 aacgcgagtt tcggtgcaag gccggttcag aacggctttt ggtgcgagac cagaggcggg
      121 aggccccccc acccttttgt gccgtcgtcg agatacccgc gcccataaaa gcctcggaaa
      181 atctctttgt agatattgcc ttctcccgat taccggcaga ttgttactgt agaaacaatc
      241 tgccggtagt tgcgcataaa gggaggtggc gcgttgaggc gtattactct ggttctggtg
      301 ctggcgttgg ttgtgtcgtt ggtcgtggga gcagggatag ccaacgccac ccacagtggc
      361 ggcaagggac ccaagaaaga ctttgccaac gggaccggtc aggtcgagac agcgaccctg
      421 atcagcagat acacgtcaac gcccagagta aggccaagaa gaataggctc ggctggatcg
      481 tcgagcatac gaccgctgcc ggaaccgagc tccgctacaa ggcgctcgtg acgtgtataa
      541 acgctgttgg tgacgacgcc gtgatcggcg gagaggtcga gcgtgtcatg gccggtacac
      601 ccggcggaga gtacttgctt gtcttcatct acgacggcga agagcccggc gctggcagcg
      661 atcaggtcag ccggaccttc agctctaccc cgccgacctg caccgagacc gctaccggat
      721 tgactccgat cacccaaggc aactacgtcg tccacgacgg aacgtcctag cggtctccgg
      781 gagcgaagaa gggacactaa ggggcgaaga tccccggccc tctctttgta tcgaacaccg
      841 agcaacacgc gagtttatgc gggcaatgcg gggtctctta acgactctta accagcccct
      901 cacgggttct taacctctat cggctaagat cagcaacggc atcaacttcg gggccggagc
      961 agttcccccc gactccatta ccgctccggc cctctttcgt acccgaaaga ccagagccgt
     1021 cggctcgcca tcgccatgcc gggaggggcg ctcgcggctg gacgcagccg cgtgtttgac
     1081 atttctggac acaggggtat aaatgttgct cttggttggc tatttgtgtg tttcgtgtag
     1141 cgatacggaa tactggccag cccgtaaacg aggaagcacg agcccaacgg gcagtgctcc
     1201 gtagtgtcaa gcgaaagagg aggtaggtag gttgaagaag ttgatgctgt tggcggcgct
     1261 tttggcgatg ctcgccgtg
//
LOCUS       DASQSL010001048         1029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_60805, whole genome shotgun sequence.
ACCESSION   DASQSL010001048 DASQSL010000000
VERSION     DASQSL010001048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60805"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..846
                     /locus_tag="VE844_10830"
     CDS             <1..846
                     /locus_tag="VE844_10830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009556416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01825.1"
                     /translation="KATVQASYEPMEAARTRLLELLHHAQHRQAYQKRTEMAVSIVQE
                     LEQEGHFPQAHYAFDNGLLSLALAREIELRGKHWVSEVESSRHIQWLGQWRRVDEVAR
                     ELRQAHPERFRSLQVRCRNGEMKSIWVFTKVVRLKRYGRKRLVIVHEQAELSDAPRFL
                     LTDARHWESRRVIETWGYRWAIEVFHELGKQVTGLESAQVRKEEAVKRHFRLSCVAQS
                     VVQRVCVEKSTSERFAFASEQITVGQKVRTIAREALQGLLEWVESLLAQGHSCEHILE
                     VLMPA"
BASE COUNT          224 a          252 c          333 g          220 t
ORIGIN      
        1 aaggcaacgg tgcaagcgag ctatgagccg atggaggcgg cacgcacgcg cctattggag
       61 ttgctccatc atgcgcagca ccgccaggcg tatcaaaagc gcactgagat ggcggtttcg
      121 attgtgcagg aactggagca agaaggccat tttccccagg cgcattatgc ctttgacaac
      181 ggcttgctga gcctggctct ggcccgtgag atcgaattgc ggggcaagca ctgggtaagt
      241 gaagtcgaaa gctcacgcca tattcagtgg ttgggccagt ggcggcgagt tgacgaagtc
      301 gcccgggagc tcaggcaggc tcatcccgag cgttttcggt cgctgcaagt gcgttgtcgc
      361 aatggcgaga tgaaatcgat ttgggtcttt accaaggtgg tgcgactcaa acgctatggg
      421 cgaaaacggt tagtgatcgt gcatgagcaa gcggagttga gtgatgcacc gcggttttta
      481 ctgaccgatg cgcgtcattg ggaaagccgc cgcgttatcg agacgtgggg ctatcggtgg
      541 gccatcgagg tctttcacga gctcggcaaa caggtgacgg gcttggaatc cgctcaggta
      601 cgcaaggagg aagcggtcaa acgccacttc cgtttgagtt gcgtggcgca gtcggtggtc
      661 caacgcgtct gtgttgagaa gtcgacatcg gagagatttg cgttcgcatc ggagcagatc
      721 acggtggggc agaaggtccg aacgatagct cgtgaagctt tacaggggtt gctggagtgg
      781 gtcgagagtc tactggccca ggggcattcc tgtgagcata tcctggaagt gcttatgccg
      841 gcttgatggg aggtcagcaa gccggatcag aattagggaa cctaccaagc cgtgtcagca
      901 tacctttccc ctgcgatttg ccattctttg actgaccgac ttttggaggg gaactgccac
      961 caaaacctgc tatcctcttg aaggacgagg catgattcac ctcaatcaga gagcgcccgt
     1021 gatgcccac
//
LOCUS       DASQSL010001049         1745 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_113705, whole genome shotgun sequence.
ACCESSION   DASQSL010001049 DASQSL010000000
VERSION     DASQSL010001049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113705"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            145..1323
                     /locus_tag="VE844_10835"
     CDS             145..1323
                     /locus_tag="VE844_10835"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01826.1"
                     /translation="MSQCYPDINSPQFGQQARAPIVGLVLAHLPLGIDGRKIDDRLAW
                     DILCYASVKRISIESACVELADAPSGNTTREHLDTALDPSRDGMRELEAQLNQALKAQ
                     LPKRVCRPIEKRRIEAAADRVEIAYHGQAAQDDNEVRRGAAKSGTTHFHMYATLAVVH
                     SGQRFTLAMTCVWAGETMDVVLARLLKRARELGVRFRRLYCDKGFCSVGVLRLLRQRR
                     IPYLIPIPARGGAAGIKRLCYGRCSYSTRYTFNRSTRAAYTTDVVIVCKYSAGRYGRH
                     RVEYFAYAVYGLGPIEAHQLFRVVPAALRDRDELSATASGEGAHQFAQSRLATAVGRV
                     SAAHRQSSRSRWYFMLLKLFRDLLIMPRMWQILPSSVSFQSRRICLEQTESSSNPKSP
                     "
     gene            complement(1644..>1745)
                     /locus_tag="VE844_10840"
     CDS             complement(1644..>1745)
                     /locus_tag="VE844_10840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015210790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein Dps"
                     /protein_id="HZC01827.1"
                     /translation="VRHSLGDKDSADIFTEISRGVDKYLWFVEAHLR"
BASE COUNT          393 a          466 c          502 g          384 t
ORIGIN      
        1 gaaatcctag ttgtcgcgtt cttgagtctt tatccatttc tcttatgatc agtagatcac
       61 gaaatgatga ataagtaacc ataagcaaag acactgactt atgcgatgat ctccggttac
      121 aaaattacac tgtggaggtc atagatgagt cagtgttacc ccgatattaa cagcccacag
      181 tttgggcagc aagctcgcgc ccccatcgtc gggttggtgc ttgcccattt gccactgggc
      241 attgacggac gcaaaattga cgaccgattg gcttgggata ttctctgtta cgcctcggtc
      301 aaacgcatct cgatcgagag cgcctgtgtg gagttggctg atgctccatc gggcaatacc
      361 acgcgcgagc acctggatac ggcgctcgat ccctcgcgcg atgggatgcg cgagttggag
      421 gcacaactga accaagcact caaagcgcaa ttgcccaaaa gggtctgccg cccgatcgag
      481 aagcgacgta ttgaggcggc cgccgatcgg gttgagatcg cctatcacgg gcaagcggct
      541 caggatgaca atgaagtgcg gcgtggagca gccaagagcg gcacgaccca ctttcatatg
      601 tatgccaccc tggcggtggt tcacagcggg caacgcttca ccctggcaat gacctgtgtc
      661 tgggccggtg agacgatgga cgttgtcctg gcgcgcctgc tcaagcgggc gcgcgaactg
      721 ggcgtgcgct ttaggcggct ctactgcgac aaaggctttt gctcggtcgg ggtgctgcga
      781 ctgctcaggc agcggcgtat accttatctc atcccgatcc cggcgcgggg cggcgcagct
      841 gggatcaaac gtctgtgtta tgggcggtgc agctactcca cgcgctacac gttcaatcgc
      901 agcacacgag cggcatacac caccgacgtg gtgatcgtct gcaaatacag cgcggggcgc
      961 tatggacgac accgagtcga gtacttcgcc tacgccgtct acggcttggg accgatcgag
     1021 gcgcatcaac tctttagagt tgtaccggcg gcgcttcggg atcgagacga gctatcggca
     1081 actgcatccg gtgagggcgc gcaccagttc gcgcaatccc gccttgcgac tgctgttggt
     1141 cgggttagcg ctgcacatcg ccaatcttcc aggtcaaggt ggtacttcat gctacttaag
     1201 ctatttcgtg atctactgat aatgcccagg atgtggcaga ttctcccgag ttcagtgagt
     1261 tttcaatcca ggagaatctg tcttgagcaa accgagtcgt cgtccaaccc gaaaagccca
     1321 taaagagcat aggcaaaagc gccgtgaaac gcaacggcgc ttgcgtgcag ggcaagcgcg
     1381 taatatagct ttacaaaaca taataggtga tcattgacgc ttcacaaaga ggagttgcca
     1441 atgaccgcca cttttatgga gcatttttcc gatctataaa gatccgcgtg acgacaagaa
     1501 caagaaacac gagctgatgg atattctgtt tctggtgatt gctgccgtca tcagtggagc
     1561 ggagggttga gaggctatcg aagcctttgg gcaagagcag ctcaattggc tgcggaaata
     1621 cttcccgttt gccacgagct gggctacctg aggtgtgcct cgacgaacca gagatacttg
     1681 tccacccctc gcgagatctc ggtgaagata tcggcgctat ccttgtcgcc gagtgagtgt
     1741 ctgac
//
LOCUS       DASQSL010001050         1318 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_22691, whole genome shotgun sequence.
ACCESSION   DASQSL010001050 DASQSL010000000
VERSION     DASQSL010001050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1318
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22691"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(328..1050)
                     /locus_tag="VE844_10845"
     CDS             complement(328..1050)
                     /locus_tag="VE844_10845"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HZC01828.1"
                     /translation="MLPPKEKLRLLSMIDILEPLSQEEIKELSLRVPDTHIEQGRIFY
                     TPYERSEALFMLKRGRVRIYRVSPDGKEFTLDVVGPGTVFGEMSLTAQRLENAYAEAM
                     EPTVVCAMKRHDLERLVMDKPQVGLKVMSVLSERLSRAEDRMEDMALKEVPARLANFI
                     LQLIESEGVVTREGYKIPTRYTHRQLAAAVGSKRETVTKAFTLLQRTGAVELKRRHIH
                     VRDIEALKKIAARHDSVSSLIS"
BASE COUNT          256 a          381 c          372 g          309 t
ORIGIN      
        1 gccttctgcg cgacgatatc gcggacccgt tcggcactaa gtcgcatctc ggggtggtct
       61 cgattcagat gctcttttgc tttgtcgaat acttctggtc atcggcggct tccaggtgct
      121 ggccgcagtc gcaatcgagt actctcatgt atcctccttt ccgcttttcc cctgtttgta
      181 aattttatcc tttttgcgta ccatggcatg gcggcactaa tcgaagaata tcgacctggt
      241 cgcggtagtc ttcccgctgg gcatctctgc tttggggcgc cgttatccga atggcgctaa
      301 gagccaatct gcttcgagga cagcagccta tgagatcagc gatgaaaccg agtcgtgtcg
      361 agcagcgatc ttcttaagag cctcgatatc cctcacgtgt atgtggcgac gcttcaactc
      421 cacggctccg gtccgctgca gcagcgtaaa ggccttggtc acggtctcgc gcttggagcc
      481 taccgcggcg gcgagctgcc ggtgggtata gcgggttggt atcttgtagc cttcgcgcgt
      541 cacgacgcct tcgctctcaa tgagctggag gatgaagttc gccaagcggg cgggaacttc
      601 ctttagggcc atgtcctcca tacggtcttc cgcccgtgag agccgctcac tgaggacgct
      661 catcaccttc aggcccacct gaggtttgtc catcacgagc cgctccaggt cgtggcgctt
      721 catcgcgcag accaccgtcg gctccatcgc ctccgcgtag gcgttctcaa gccgttgagc
      781 tgtcagggac atctccccga agaccgtacc gggacctacc acatcgagtg tgaactcctt
      841 gccatcgggg cttacccggt agatcctgac ccgccctctc ttgagcatga agagcgcctc
      901 ggaacgctcg tagggagtgt agaagatacg gccctgctct atgtgggtgt ctgggacgcg
      961 aaggcttagc tcctttatct cctcctgaga gagcggctcg aggatgtcga tcatggagag
     1021 gagtcgcagc ttttccttag gcggcaacat acctgcttcc tcctagtcag gttttcacaa
     1081 aggatatctt acgagcgaca accccacaat ttagtgctac ccgagtgtat tggtccgcta
     1141 cgtcacataa atttatgtac tgctccccaa ataataaatt cgacaatagg gcctccgcgc
     1201 ggggttcggc gccccgaaag gagaaaagaa ggaggtagag atggccacga gaacacgaac
     1261 aagcgcaggt agctcgctgt ggcagcgaat cataggggga gtggtcggcg gcgtagct
//
LOCUS       DASQSL010001051         2633 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_196271, whole genome shotgun sequence.
ACCESSION   DASQSL010001051 DASQSL010000000
VERSION     DASQSL010001051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2633
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196271"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1070)
                     /locus_tag="VE844_10850"
     CDS             complement(<1..1070)
                     /locus_tag="VE844_10850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019864206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HZC01829.1"
                     /translation="MKQLFRTKRTTPEDFSHSGLKRCLSAFDLTLLGIGAIIGTGIFV
                     LTGIAAANQAGPAVILSFVVSGIACAFAALAYAELAASVGGCGSAYGYSYAAFGELFA
                     WIIGWTLLLEYGIAVAAVANGWSGYFQNALIALGSSLPEHLINAPSKGGLINLPAFGI
                     VMILMVLLSIGIKQSARFNAAMVFVKLLTIAVFLAVATFNVNPDNWSPFMPFGWFGHS
                     PDGKPIGVLAGAAIVFFAYIGFDAVSTAAEEAHNPQRDLPIGIMGSLAFCTVIYILVA
                     GLLTGISPYQQLGVSSPVADALQRLGFSWASGLVAAGVIAGLTTVMLVLYYGLTRIIF
                     AMARDGLLPTLFADVNERTHTP"
     gene            1183..2442
                     /locus_tag="VE844_10855"
     CDS             1183..2442
                     /locus_tag="VE844_10855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01830.1"
                     /translation="MRKLTLIPTDATAYPVYLTAGAINSLIQTLPSGTAYCIGIVLIV
                     MMTGRLMHHKGSLARAALPLVLELRWGWHRVEGAMEGGKFLLDGLFDCASEWCLTHLE
                     VEPVRLGCQGREVIAIDSSTIARLRCQVGKAALLGKGYCHRAGRAVRANIIATAVSVV
                     LIRGVRVGLVRRVRFGASCEAAVSQLFADLPKSAGARLIVVDAGIATKEQFAAATAHD
                     ALLGRLRGNCRLRCAPSPPNGKRGRNPIHGPVLHPGRSLPEVAPDEDLTFPSEAGPVR
                     LRRWHQVHWEGYHQTPVDVLRVDDPSYKEPLLVGTTAGELTTEELWQAYPHRWPVETL
                     FYIGAETTATEKPRAWTEQAVERRIGLGLLSGSLLKAIAAMGEGLAMEPWDKKPQPSA
                     GRLANHLEIHIENLSALALEGVQARNY"
BASE COUNT          593 a          687 c          832 g          521 t
ORIGIN      
        1 atcggcgtgt gggttcgttc gttgacatca gcaaaaaggg tcgggagcag gccgtcgcgg
       61 gccatcgcga agatgatccg ggtgagtcca taataaagca ccagcatgac cgtggtcagt
      121 ccggcgatca caccggcggc cacaagcccc gaggcccaac tgaagcccag acgttgcagg
      181 gcgtcggcca ccggcgaaga caccccaagc tgctggtaag ggctgatccc ggtcaagagt
      241 ccagcgacta gaatatagat aaccgtgcag aatgccaggg atcccataat accgataggg
      301 aggtcgcgtt gggggttgtg agcttcctcg gcggctgtcg agacggcatc gaagccaatg
      361 taagcaaaga agacgatagc ggccccggcg agcacaccga tgggtttgcc atccggactg
      421 tgaccaaacc agccgaacgg catgaacggc gaccagttat cggggttcac attgaatgtg
      481 gcgaccgcta aaaataccgc gatggtcaag agtttcacaa acaccatagc ggcattaaag
      541 cgggcgctct gtttgatacc gatactcaat agcaccatca agatcattac gatcccgaag
      601 gcgggcaggt tgatcagacc gcctttactg ggggcattga taagatgctc cggcaagctg
      661 gatcccaggg cgatcagggc attctgaaag tagccagacc agccgttggc gacagcggcc
      721 acggcgatcc cgtattcgag cagcaaggtc cagccgatga tccaggcgaa cagctcgcca
      781 aaggcggcgt agctgtatcc gtaggcgctg ccacaaccac cgacactggc ggcaagctcc
      841 gcataagcga gcgcggcaaa ggcgcaggcg atccctgaga ccacaaacga caggataacg
      901 gcgggtccgg cctgattcgc cgcggcgatc ccggtgagca cgaagatccc ggtgccgata
      961 atggcgccaa tgcctaacag ggtcagatca aaggcgctca gacaacgctt gagcccactg
     1021 tgcgaaaaat cctcaggtgt ggttctcttg gtgcgaaaca attgcttcat aaatggtacc
     1081 ccctcccatg atgatccgag cggtttatcc tcggtagtat taactcgtgt tttaccaatt
     1141 tgagtagcag ttagcggtcg aatccaggaa gctaaggggg ttatgcgcaa actaaccctt
     1201 attccgacgg atgcgaccgc ctatccagtg tatctaacgg cgggggcgat taatagcctg
     1261 attcagaccc tgccctccgg cacggcatat tgcattggca ttgtcctgat tgtgatgatg
     1321 acggggcggt tgatgcacca taaaggcagt ttggcgcgtg ctgccctgcc cctggtttta
     1381 gagttgagat ggggctggca ccgcgttgag ggggcgatgg agggtgggaa gtttttgctt
     1441 gacgggctgt tcgattgcgc ctctgagtgg tgtctgaccc atctggaagt agagcctgtg
     1501 cgcttaggct gccaagggcg tgaggtcatt gccatagaca gttcgaccat tgctcgcctg
     1561 cggtgccaag tggggaaagc ggccttgttg ggtaaaggtt actgtcaccg tgcggggcgc
     1621 gcggtgcgtg ccaacatcat tgcgacggcg gtcagcgtag tcttgattcg cggtgtgcgc
     1681 gtagggttgg tgcggcgtgt gcggtttggg gcgagttgcg aggcggcggt aagccagctc
     1741 tttgcggatc tccccaagag tgcgggggcg cgtttgatcg ttgtggatgc agggatcgcg
     1801 accaaagagc agtttgcggc ggccacggcc cacgatgcgc tgctcggacg gttgcgaggt
     1861 aactgcaggc tgcggtgtgc accatccccg cctaatggca agcgcgggcg taacccaatt
     1921 catggcccgg tattgcatcc ggggcgcagc ctaccggaag ttgcgccgga tgaagatctc
     1981 accttcccca gtgaagctgg cccggttcgt ctgcggcgct ggcaccaggt gcattgggaa
     2041 gggtatcacc agacgccggt ggacgtgttg cgcgtggatg atccgagcta caaggaaccc
     2101 ttgctggtag gcacgacggc cggcgagctg acgaccgagg aactgtggca agcttatcct
     2161 catcgctggc cagtggagac gctgttttac atcggtgccg agacgaccgc cacggagaaa
     2221 ccgcgtgcgt ggaccgagca agccgttgag cgtcgcatcg ggttaggatt gttgagtggg
     2281 tcgttgttga aagcgatcgc ggcgatgggt gaggggctag ccatggagcc ctgggacaag
     2341 aagccacagc ccagtgccgg acggttggct aaccacttgg agattcacat cgagaatcta
     2401 tcggcacttg cccttgaagg ggttcaagcg agaaactatt gaaaaaatcc ccaagccgct
     2461 caggcacagg acttacagct caaaaaagca gcctgaaatt ggtaaaacac gagtaagttt
     2521 gataaaagcg catttgcgat ttctagccct tcattcgaag agccaatgaa tacgattggg
     2581 cggtaatctt ttggcatagc tttgacaatt cccactctaa catagagagt ata
//
LOCUS       DASQSL010001052         1567 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_60845, whole genome shotgun sequence.
ACCESSION   DASQSL010001052 DASQSL010000000
VERSION     DASQSL010001052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1567
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60845"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            158..613
                     /locus_tag="VE844_10860"
     CDS             158..613
                     /locus_tag="VE844_10860"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC01831.1"
                     /translation="MRKVIPPITEHAADLKQRLQREHDSHKKLRLQMLYLLASGQAHE
                     RQAVARLLGVHRNTIGRWLALYAAGGLEALLATYVPPGKPVSLTPQVLASLEQALHRP
                     EGFASYEALRQWVRQTHGVEVKYKTLYTIVRTRFRAKLKVPRPSHTKKP"
     gene            618..1208
                     /locus_tag="VE844_10865"
     CDS             618..1208
                     /locus_tag="VE844_10865"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC01832.1"
                     /translation="MAAFQTSCRDHLQQVIPPANTRPIRVFSQDESRFGLLTIRRRRL
                     TSRGVQPVGSVQHVFEWFYVYGAVEPTTGDRFFLELPYLNAENFQIFIDLFAQAFPDS
                     LNLLLLDNSGAHTAQHLTVPENVCLVFLPPYCPELNPIERVWRDLKDALAWLQFPNLD
                     VQQDSVAMLLRGYEAITLQALTGYSYLVDAIHALRL"
BASE COUNT          314 a          502 c          425 g          326 t
ORIGIN      
        1 cgcggtatat gcggcttgag ggtgtctgca tcttcgctga tcaccggtac ggcatgacgc
       61 atggcctgct ctcctaatat gaattcgtgt tgattctagt gcatagaatt gctaccctcc
      121 agagtctccg tggtggtcct agcttggagg gcagcccatg cgcaaagtga ttcccccgat
      181 tactgaacat gccgccgatc tcaaacagcg tctccaacgt gaacatgaca gccataagaa
      241 gctgcgcctg cagatgctct acctgctggc gagtgggcag gcccacgagc gccaggcggt
      301 ggcccggctg ctgggcgtgc atcggaatac catcgggcgc tggctggccc tctacgctgc
      361 tggagggctg gaggccttgc tggccaccta tgtcccgcca ggcaaacccg tctccctcac
      421 gccccaggtg ctcgccagcc tggagcaggc gctccaccgg cccgagggct ttgcctcgta
      481 tgaggcgctg cgccagtggg tgcggcagac ccatggggtg gaggtcaagt acaagacgct
      541 ctacacgatc gtgcgtacac gcttccgggc caagctgaaa gtgccgcgcc ctagccacac
      601 aaaaaaaccc tgaggctatg gcggccttcc agacgagctg tcgcgaccac ctgcagcagg
      661 tcatcccgcc cgccaatacg cgccccatcc gggtctttag ccaggatgaa agccgcttcg
      721 gcctcctgac gatccgccgc aggcgtctca cctcccgcgg cgtgcagcct gtgggatctg
      781 tccagcatgt cttcgagtgg ttctatgtgt atggtgcggt ggagccgacc acaggcgacc
      841 gcttcttcct ggaactgccg tatctgaacg cggagaattt tcaaatcttc atcgacctgt
      901 tcgcgcaggc ctttcctgac agtctgaatc tcctgctgct ggataatagt ggcgcccata
      961 cggcccagca ccttaccgtc ccggaaaacg tctgcctcgt attcttgccg ccctactgcc
     1021 ctgagctgaa ccccattgag cgagtctggc gcgacctgaa ggacgcgctg gcctggctcc
     1081 aattcccgaa tctggatgtg caacaagact ctgtggcaat gctcctccgg gggtatgagg
     1141 cgatcacgct ccaagccctc acaggctact cttacctcgt cgacgctatt catgcactcc
     1201 gtctatagcg aagtcatatt aggcttcttt cagttcctgc ggaacgttcg tcaacggaat
     1261 gcgttcgagc aggccgagat gatcttatat gcggcactag acccagctat tgccagctga
     1321 gccagaaagg gagcgttcgt tacgtgcttt gaccacttcg acctccgacc acgtctactg
     1381 aatcctcccg caaactcgtt gttaaataca ccaaagcagc cgggattacc aaaaaggtga
     1441 gctgtcacac cctgcggcac accttcgcca cctacaaagc ggagaagggc gtctcgccct
     1501 tccagctcca acagtggctg gggcatgcca atctcaacac cacccaaatc tatgtgcacc
     1561 tgggaaa
//
LOCUS       DASQSL010001053         2628 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_129239, whole genome shotgun sequence.
ACCESSION   DASQSL010001053 DASQSL010000000
VERSION     DASQSL010001053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2628
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129239"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            481..831
                     /locus_tag="VE844_10870"
     CDS             481..831
                     /locus_tag="VE844_10870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01833.1"
                     /translation="MTPVTAGKVKYGVWGVIGGAVIAMIIGFAWGGWTTARTTQRMGE
                     EAVLAARAAICVAQFMKEPNHAEKLQEFGTLLSYQRGPFIEKGGWDKMPGEERAGPLV
                     ARACADGLEVLLKK"
     gene            951..1361
                     /locus_tag="VE844_10875"
     CDS             951..1361
                     /locus_tag="VE844_10875"
                     /inference="COORDINATES: protein motif:HMM:NF013003.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HZC01834.1"
                     /translation="MGLLSSSLSWFSCGFSRHQSLRGTHLEGAFLWGAHLGGATLGKA
                     HLRGADLRGAHLERAILREAHPLEEASGPWVVSITHYSRRHRHLTDACIPQIREHHRE
                     PASCRAHVVDVVTRFDPQCDTLGGGSNGRRPRPS"
     gene            complement(1364..1963)
                     /locus_tag="VE844_10880"
     CDS             complement(1364..1963)
                     /locus_tag="VE844_10880"
                     /inference="COORDINATES: protein motif:HMM:NF019149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZC01835.1"
                     /translation="MADAKTPMQKQREQRRAQGWRDVNVWLTPEGQQRIARLTEPGES
                     LSTLIDRALVALEALHSGRAIRSRTSDVTSQQPENLQALIEHAVSRYFTSDRFRDNLF
                     IPLLKQTVSSCLPSDLTRYLTSEPITVPALPVHSSAARIRAPEGKDQKTAVLTRLRAM
                     QAEGLSLQAIANQLNAEGVPTLSSKGRWQKGTIANLLKE"
     gene            complement(2054..>2628)
                     /locus_tag="VE844_10885"
     CDS             complement(2054..>2628)
                     /locus_tag="VE844_10885"
                     /inference="COORDINATES: protein motif:HMM:NF019884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC01836.1"
                     /translation="SQPPARGFYMPTIMIAPVEAASQSKGTTLSVLRRLAYRHNDYYG
                     YAYPSHEDIADYLRISVRTVQRHIKKLEAMGEIIVQRVHGRGLNNRYFLKLLGIVPKP
                     RKHDKPSRWSRLKDTINQAFQGKHDNSSAPKQYTNDISHTARSSTSYLQAKPRPDTQP
                     LPEKPEILSPFWCSIHQFCHSDPLPRYCRA"
BASE COUNT          526 a          681 c          813 g          608 t
ORIGIN      
        1 cgcgcagggc acgacagccg aaggggagga tggcacacga cgaggcgcac gtgatcctgg
       61 tcaagctgag cggcacgcag tggacggtgg cccatcaggc ggcgctcaat ttatcgcagt
      121 ttgtagtggg ggtaaaaggg ggtgagtatc atccagataa cgtttaaatc ctcctaacct
      181 atggattttc ttgcataacc atctgttcag tgggcacatg agacaaggtt atatatttca
      241 gcaacttagc cgaatcctac ggttgctggg tccttacgtt cctcggctcg tgatcctatt
      301 tttacgcttc tacaaactgc gataaattga gcgttttgag tttgctctgt aacccaccgg
      361 accttaggtt ggctctgtcg ctcaccatgt ttggcagcat ctgacacgtg cccgcgagtg
      421 acagaaaggg gaggccatgt aggacgtcgg caaggatgct ggtcacggga gggatgagcc
      481 atgacccccg tcacggcagg gaaggtgaag tacggggtgt ggggcgtgat tggtggggcc
      541 gtcatcgcca tgatcatcgg ctttgcgtgg ggtggttgga ccaccgcgcg cacgacccaa
      601 cggatgggcg aagaggcggt cttggcggcg cgggccgcga tttgcgtggc ccaatttatg
      661 aaggaaccga accatgcaga gaaactgcaa gaattcggga cattactgtc ctaccagcga
      721 ggtcccttca ttgaaaaagg gggctgggat aaaatgcccg gggaagaacg ggcgggccct
      781 ctggtcgccc gcgcctgcgc cgacgggctt gaagtgcttc tgaaaaaata ggcgaggctg
      841 gccgggaggt cgtgggtcat ccagcgttct tttcactacc ccgcaatggt gaagcggtga
      901 agccatgaga cgggtattaa ctttcctacg acgacaccta cctataatgc ttggggctct
      961 tatcctcctc gctgtcgtgg ttctcttgtg gattttctcg gcaccaatcg ctcagaggga
     1021 cccacctgga gggggcgttc ctttggggcg ctcacctggg gggagcgacc ctcggaaagg
     1081 cccacctgcg gggggcagac cttaggggcg cccacttgga gagggcgatc ctcagagagg
     1141 cccacccgtt agaagaagca tccggcccgt gggttgtatc tatcacccat tacagccgca
     1201 gacatcgaca tctgaccgac gcctgcatac cgcaaataag agagcatcac cgcgagccgg
     1261 catcatgccg cgcgcatgta gtggatgtcg tgacgcgctt tgacccgcaa tgtgacacgt
     1321 tggggggtgg gtcaaatggc cgtaggcccc gcccgagtta gggctactcc ttgagcagat
     1381 tggcaatcgt gcccttctgc cagcgccctt tgctgctgag cgtcggcaca ccctctgcat
     1441 tgagctgatt ggcgattgcc tgcagcgaga gcccctcagc ctgcatggcc cggagccggg
     1501 tgagcactgc cgtcttctgg tctttgccct ctggcgctcg tatacgtgcg gcgctgctgt
     1561 gcaccgggag cgctggcacg gtgatcggtt cactagtgag gtatcgagtg aggtcactag
     1621 gcagacaact agagacagtc tgttttagta gtgggataaa aaggttatct cgaaatcgat
     1681 cactagtgaa atatctagag acggcatgct cgattagtgc ctggaggttt tccggctgtt
     1741 gactagtcac gtcactagtt cgagatctga tggctctgcc gctatgcaga gcttctagtg
     1801 caaccaaggc acgatcgatt aacgtgctca gactctcccc tggctccgtg aggcgtgcga
     1861 tacgctgctg tccctcaggg gtgagccaga cgttcacatc acgccagcct tgcgcccggc
     1921 gttgctcccg ttgcttctgc atcggggtct ttgcatcggc cattagcacc ccttttacgg
     1981 tcactagatt accatctagt gagtttagga cgttcctggg gtcaggtagg ggtttaggcg
     2041 caacgatctc tcgtcaggcc cggcaatacc tcggaagcgg gtcactgtgg caaaattgat
     2101 ggatcgagca ccagaacggg cttagtatct cgggcttctc cggcaagggc tgggtatcgg
     2161 gtcggggttt ggcctgtaga taactcgttg acgaacgggc tgtatggctt atatcgtttg
     2221 tgtattgctt aggagcggac gaattgtcat gttttccctg gaaagcttga ttgatcgtat
     2281 ctttcaggcg tgaccagcgc gacggcttgt catgttttct gggcttgggg acgataccta
     2341 gaagcttgag gaaatagcga ttgttcagcc ctcggccgtg cacccgctgg acgatgattt
     2401 cgcccatggc ttcaagcttc ttaatgtgcc gttgaaccgt cctgaccgag atgcgcaggt
     2461 aatcggcaat gtcctcatga ctcgggtagg cgtagccata atagtcgttg tggcggtagg
     2521 ccagacggcg aagaacggag agcgttgtac ctttcgattg acttgcggcc tcgactggcg
     2581 ctatcataat agtaggcatg taaaatcctc gtgccggggg ttgactgc
//
LOCUS       DASQSL010001054         1639 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_185808, whole genome shotgun sequence.
ACCESSION   DASQSL010001054 DASQSL010000000
VERSION     DASQSL010001054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1639
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185808"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(94..234)
                     /locus_tag="VE844_10890"
                     /pseudo
     CDS             complement(94..234)
                     /locus_tag="VE844_10890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813036.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
     gene            339..503
                     /locus_tag="VE844_10895"
                     /pseudo
     CDS             339..503
                     /locus_tag="VE844_10895"
                     /inference="COORDINATES: protein motif:HMM:NF024776.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            577..1515
                     /locus_tag="VE844_10900"
     CDS             577..1515
                     /locus_tag="VE844_10900"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC01837.1"
                     /translation="MMSRDGGVNPVFPPLDHALVKAVACELVAETKQPLSRQSLADVT
                     TRAQHTLAKPISRSTVWRILAADAIKPWRYKYWIFPRDPHFVEKAGPILDLYAGTWQG
                     QPLGPKDHLLSADEKTSIQARIRCHPALPPAPGRLARIEHEYERGGALQYLAAWDVRR
                     GYVIGRCEPTTGIEPFGRLVRQVLTEEPYRSAERLFWIVDNGSSHRGDTARQRLRQVD
                     ARILLVHTPVHASWLNQVEIYFSIIQRKVLTPNDCADLEAIRLRLALYEELSNQHPTP
                     FQWKFDRTKLITLLAKIEAHQKLLTEAQLNCPKKAA"
BASE COUNT          351 a          488 c          449 g          351 t
ORIGIN      
        1 ggtggatttc catttcgagt aaaaggggac agaccacact atatatacta ttaccccctc
       61 ccccgcgcga tcgccgtacc ccacccattg aggctattcg ccgtctatcc gctcgtactc
      121 ggcaatgact tgagcgccaa gcaagaggat aatagcaccc acctcgaggc ttaccaggat
      181 gatgatggct gttgcaaacg agccgtagat catattaact agggagagct tagtgctgca
      241 tttcacaaat aactccaggg ttggctgatg ccactttatg gtaatctgtg gggacttcgg
      301 atggatacga agagaattct tgcaaatggg tgcccattat gcctggacct ctccccgcgt
      361 atcgccccga tttccccgcg agtttcgttg ctcactgcta ccagatcggt actcggcgca
      421 cggtcaagta ccagcttcgg caacgtgcca gcttggtgct cctgttgcac gagcagccgc
      481 tcctttccaa tgttgaggca gccgctcggg tagggttgca ccctgactct gcccgccact
      541 ggaggcagcg atgggccaag ggggacttct ccctggatga tgagccggga cgggggcgtc
      601 aaccccgttt ttccccctct ggatcacgcg ctggtcaaag cagtggcctg cgaactggtc
      661 gcggagacca agcaaccact gagtcggcag tcactggctg acgtgaccac acgtgcgcaa
      721 cacacgctgg ccaaaccgat cagtcggagt acggtgtggc ggattttggc cgctgatgcc
      781 atcaagccat ggcggtacaa gtactggatc tttccccggg atccccactt tgtggagaag
      841 gctggaccga ttctggactt gtatgcgggc acctggcaag gtcaacccct tggccccaaa
      901 gaccacctcc tcagtgctga tgagaagacc agcatccagg cccgcatccg ctgccatccg
      961 gccctgcccc ccgcaccggg ccgtctggca cgcatcgaac acgagtacga gcgcggtggg
     1021 gcgctgcaat atctggccgc gtgggacgtg cgccgggggt acgtgatagg acggtgtgaa
     1081 ccaacgaccg gcatcgagcc ctttggccgg ctggtacgcc aagtactgac agaggaaccg
     1141 tatcggtccg ccgaacgcct gttctggatc gtggacaacg gctcgtcgca tcgcggcgat
     1201 accgcgaggc agcgactgcg tcaggttgat gcccgcatcc tgctggtcca taccccggtc
     1261 catgccagtt ggctcaatca ggtggaaatc tacttctcga tcatccagcg aaaggtgctg
     1321 accccgaatg actgtgccga tttggaagca atccggctcc ggttggcctt gtacgaagag
     1381 ctatccaacc aacacccaac gccttttcaa tggaagtttg accgaaccaa actaataacg
     1441 ttgttggcca agatcgaggc ccatcaaaag ctcctcacag aggcccaact caactgtccc
     1501 aagaaggcag cataacctgg gtgttattta tgaaacggag cacttaggtt tagttatcac
     1561 cttaaggctt gtcagattcg cgacaacccc tttgttgcgg tggcttggct attataccta
     1621 ttactccccg atgtttttc
//
LOCUS       DASQSL010001055         1450 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_76387, whole genome shotgun sequence.
ACCESSION   DASQSL010001055 DASQSL010000000
VERSION     DASQSL010001055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76387"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..345)
                     /locus_tag="VE844_10905"
     CDS             complement(<1..345)
                     /locus_tag="VE844_10905"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007919772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HZC01838.1"
                     /translation="MSDFPNSVEGAGAVRYINPDSLNKNPAFTNVVVVEGNVKTVHIG
                     GQDAVNASGEIIGKGDVAAQTEQVLRNLRTALAAGGAGPEHIIKWNIYIVEGQSLQAG
                     YAAFQNAWPEVPN"
     gene            complement(459..656)
                     /locus_tag="VE844_10910"
     CDS             complement(459..656)
                     /locus_tag="VE844_10910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007903793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01839.1"
                     /translation="MRIGKIHVVMYKLSQQRRVLSLSRTFSWLSQNRRMSKDYERLPE
                     SSEALVYVAMSRLMVRRLATS"
     gene            733..1368
                     /locus_tag="VE844_10915"
     CDS             733..1368
                     /locus_tag="VE844_10915"
                     /inference="COORDINATES: protein motif:HMM:NF020496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI/OmpD-associated family protein"
                     /protein_id="HZC01840.1"
                     /translation="MANKTSKKSTKVARPAHLAGGNPQVAKADSDGPPVLRFEAQLFQ
                     HPKTAKTDFQTLLNVPEWVSKQFPSHVSTKVEGTINGHPFRAALEPNTSGGHWLRVNK
                     AMLKGAGAHAGDRVRLAILGPEPEPTVPADLWVALTASHEAKTLWEDLTIMGRRDWVR
                     WIESAKQPETRTRRVIRTVEQLSSGKRRACCVNVYEFMLCRIQEYEQTEES"
BASE COUNT          318 a          429 c          395 g          308 t
ORIGIN      
        1 gttgggcacc tcgggccaag cgttctggaa cgcggcatag cctgcctgca gcgattgccc
       61 ctcgactata tagatgttcc acttgatgat gtgctcgggc cccgcgcccc cggccgccag
      121 cgccgtccgc aggttccgga gcacctgctc ggtctgcgcg gccacgtcgc ccttaccaat
      181 tatctctcct gaggcgttga ccgcgtcctg accgccgatg tgcaccgtct tgacgtttcc
      241 ttcaacgacg acgacgttcg tgaaggcagg gttcttgttt agggagtcgg ggttgatgta
      301 gcgcaccgcc ccagcgccct ccacgctatt cgggaagtcg gacatctcaa gagtcctttc
      361 gctcgtgatt cgacaactct atcaacaata ttacgctgac cgcgagctgt gtccatcgcc
      421 attcatcgaa gctcctaaga gaaactgtct gagaagcctc aagaggtagc caaacgcctc
      481 accatcaagc ggctcatcgc tacgtagacg agcgcctcgg agctctcggg cagccgctcg
      541 tagtctttgc tcatccgtcg gttttgagag agccaggaaa aggtccgcga aagcgacaga
      601 acccgccgtt gctggcttag cttgtacatt acaacgtgaa tttttcctat acgcacgcaa
      661 gtctaccgat gtggaatttc tagaatcgag gatacttggt tgtatatcaa ttcatcagtt
      721 ggagtgaacg caatggccaa caaaacctcc aagaagtcaa ctaaggtcgc aaggccggct
      781 cacctcgcag gcggcaaccc tcaggtcgcg aaggccgata gcgacggtcc acccgttttg
      841 cgcttcgagg cacagctctt tcagcatcct aagacggcga agaccgattt ccagaccctg
      901 ctcaacgttc cggagtgggt cagcaagcaa tttccctcgc acgtctcgac caaggtcgaa
      961 ggcaccatca acggtcatcc tttccgagcg gcactggaac ccaacacgtc cggaggccac
     1021 tggctgcgtg tgaacaaggc catgctcaag ggcgctggtg cccacgcggg cgacagggtg
     1081 agactcgcta tcttgggacc agagcctgaa ccgacagtcc ccgccgatct ctgggtcgcc
     1141 cttaccgctt ctcatgaggc gaagacgttg tgggaggacc tcacgattat gggtcgccgc
     1201 gattgggtcc ggtggatcga atcggccaag caacctgaga cccgaacccg ccgggtcata
     1261 cggaccgtcg aacagctttc ctcgggaaag cggcgcgctt gttgtgtgaa tgtctatgaa
     1321 tttatgctgt gtcgtattca agaatatgag cagaccgaag agtcttaaag caaccatatt
     1381 gaagtaaatc ggagaaacct tgccaataac tgcgggctct gtcgcgttct tgatgatcga
     1441 cgaaaatccg
//
LOCUS       DASQSL010001056         1036 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_88711, whole genome shotgun sequence.
ACCESSION   DASQSL010001056 DASQSL010000000
VERSION     DASQSL010001056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88711"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..303)
                     /locus_tag="VE844_10920"
     CDS             complement(<1..303)
                     /locus_tag="VE844_10920"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HZC01841.1"
                     /translation="MLLVQDWMSRHLVTLPPEASVAEALTLCRERRIRHIPILEEGRL
                     VGIVSDRDLRDASPALGDPERASALQEIRVEEVMTREVITADPRDSIEDAAQEMYEL"
     gene            complement(681..>1036)
                     /locus_tag="VE844_10925"
     CDS             complement(681..>1036)
                     /locus_tag="VE844_10925"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013159461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase"
                     /protein_id="HZC01842.1"
                     /translation="VTFREILEVFFTIHDPTTLNRQGPDVGTQYRSAIFYHTPEQKRV
                     AEEVIAELDAAHLWDAPIVTEVTPFHAFYRAEDYHQEYFRRNEAQPYCRVVIAPKVAK
                     FRTQHLARLKRSTAM"
BASE COUNT          206 a          311 c          294 g          225 t
ORIGIN      
        1 cagctcgtac atctcctgcg cggcatcctc tatggagtcc cgtgggtccg ccgtgatcac
       61 ctcccgggtc atcacctcct ctacccgtat ctcctgaaga gcgcttgctc gctccggatc
      121 acctaaagca gggctcgcgt ccctaagatc acgatcagaa actatcccta ccagccgtcc
      181 ctcctctaag atcggtatgt gccttatccg cctctcccgg cagagggtca gggcctcagc
      241 cacgcttgcc tcgggcggaa gcgtcacgag atgccggctc atccaatctt gcaccagtag
      301 cactattact aacctccccc attgttggct gtgcggcgcc aaagaaggcg ccaaggttgt
      361 cgccgttagg taacttgatg catcttaccg cgcaaccacc tttccccgac aatcaccgcc
      421 accatcgcgg ctaccgcaac aaccggcttg atgcgcctca ctacgcacct cctttacgcg
      481 gcaacccccg gtgggttgcg gtcattgcaa atattagcac aaactggagg ataagtacat
      541 gttcagtaga ggagcaatag ctattgcgga tggcggcatg aattggaagc gaccaagcga
      601 gcgttgagag atgttgatgg agattgcagg ccaggtggtt tatcgcctgg tggagatgat
      661 gtagctatgg atggttcagt ttacatagcg gtactgcgct tgagcctggc gaggtgctgg
      721 gtgcgaaact tcgctacttt gggcgcgatc acgacccggc aatacggctg cgcctcgttg
      781 cgccggaagt actcctggtg gtagtcctca gcacggtaga aggcgtggaa tggcgtcact
      841 tccgtcacga tgggcgcatc ccaaaggtgc gctgcgtcca gctccgcgat gacctcctcg
      901 gcgacacgct tttgttcggg agtgtggtag aagatcgccg agcggtactg cgtcccgacg
      961 tccgggcctt gccggttcaa cgtcgtggga tcgtggatgg tgaagaagac ctccaggatc
     1021 tccctgaacg tgacca
//
LOCUS       DASQSL010001057         1072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_129300, whole genome shotgun sequence.
ACCESSION   DASQSL010001057 DASQSL010000000
VERSION     DASQSL010001057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129300"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..763
                     /locus_tag="VE844_10930"
     CDS             <1..763
                     /locus_tag="VE844_10930"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HZC01843.1"
                     /translation="GWSTEVSNDVADLIAEMDRAGVDCATLVQPNATYGLDNSYQCDS
                     AKQYAPRTVAVGILDPAAPDAADKLSYWVNERGMKGVRLQSQAEPDDPRCDALWHRAE
                     ALEIPISIGGGGQPEKVDRMRNVGARHPNVIFAPDHFAGWSGAENKAAMTTALEALAQ
                     LPNAYLRISSTSLRPHADLTPLEKELFRRVIEVFTPQRVMWGSNFPSSREGGYIGQVH
                     LAQTALPWLSDEDRGWIMGETAHKLWPMLQASGKG"
     gene            816..1010
                     /locus_tag="VE844_10935"
                     /pseudo
     CDS             816..1010
                     /locus_tag="VE844_10935"
                     /inference="COORDINATES: protein motif:HMM:NF013780.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase"
BASE COUNT          222 a          316 c          311 g          223 t
ORIGIN      
        1 gggatggtct actgaggtca gcaacgatgt cgcggacctg atcgcggaga tggacagggc
       61 cggcgtggat tgcgcaacgt tggtgcagcc caacgccacc tacggtctcg ataactccta
      121 ccagtgcgac agcgccaagc agtacgcacc acgtactgta gctgtgggga tcctggaccc
      181 ggctgcgccc gatgccgcgg ataagctctc ctattgggtg aacgagcgtg gcatgaaggg
      241 tgtgcgcctc cagagtcagg ccgagcccga cgatcctcgc tgcgatgctc tgtggcaccg
      301 cgccgaagcc ctcgaaatcc cgatctccat cggcggcgga ggccagccgg agaaggtcga
      361 tcggatgcgg aacgtgggcg cccgtcatcc caacgtcatc tttgccccgg accacttcgc
      421 cggctggagt ggcgccgaga acaaggcagc tatgaccacc gccttggaag cactggccca
      481 gttgcccaac gcctacttgc gtatttccag caccagtctc cgccctcacg ccgacctgac
      541 gccgcttgag aaggagctct tcaggcgagt cattgaggtg ttcacgcccc agcgggtcat
      601 gtggggctcc aatttcccct cttcccggga aggtggttac atcggccagg tccatctcgc
      661 ccagacggct ctgccctggc tctctgatga ggaccgaggc tggatcatgg gtgagaccgc
      721 ccacaagctt tggccgatgc tgcaagcgtc aggcaaggga tagatgtcct cggggtccga
      781 ctcgatttat accagtttag gcaaaacgtg gttggcctgc atttgatcaa gagataccag
      841 gagctgtaaa tcgcttacct gaccccgatg gtatgcgaac ggaaatcgag tgtgctaact
      901 gtggcggcca tctatgccac ttacttatcg gagaacgtct cactgcaacc aacactcatc
      961 attgcgtaaa ctccctctcg atgaggtttg tgcctgagaa agaggcatag gtcttctaag
     1021 ctgtaataac caacacttga attgactggg ttttcctaat gagttagttt ct
//
LOCUS       DASQSL010001058         1170 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_22751, whole genome shotgun sequence.
ACCESSION   DASQSL010001058 DASQSL010000000
VERSION     DASQSL010001058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22751"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..603)
                     /locus_tag="VE844_10940"
     CDS             complement(<1..603)
                     /locus_tag="VE844_10940"
                     /inference="COORDINATES: protein motif:HMM:NF012904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HZC01844.1"
                     /translation="MTARKPIEGIIAMLVTPFDDQYHLDEGALRAEVDWCVAQGANGI
                     VTTPSIGEFVHLTKEERWRCFEVCLDQAQKHQGLVAVAMTSGPTTLEALEHTEVAGKM
                     GYDAALLIPPYYWRCGEEEVFRHYEMVAKANYLPLIVYHNPALSKFHMTPRFFGRLSS
                     IPGIVAIKEVLTDLQHLEALFDAVAGRLMVLQTFRAFFTGL"
     gene            complement(653..>1170)
                     /locus_tag="VE844_10945"
     CDS             complement(653..>1170)
                     /locus_tag="VE844_10945"
                     /inference="COORDINATES: protein motif:HMM:NF014899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="catechol 1,2-dioxygenase"
                     /protein_id="HZC01845.1"
                     /translation="AHKGLPIHYGTLNPMHYFNPHRNKRILPLSILYTSSVHNDLRFG
                     ELIGRAIKKSGRWVVLVASGGLSHTFWPFDTIHSHASASPEEISSPINREYDLKIIDL
                     LKQGRHADVIVLAEEFREKCSPEGRFAHYLMMIGALGQASFTSPGIQYGDYEAAIGTG
                     QAIFWFDAPIT"
BASE COUNT          251 a          329 c          359 g          231 t
ORIGIN      
        1 gaggccggta aaaaaggctc ggaaggtctg gaggaccatc agccgccctg ccacggcatc
       61 gaagagggcc tccaggtgct ggagatcagt caaaacttcc ttaatggcca caatccctgg
      121 aatagaagac aggcgcccga agaacctggg ggtcatgtgg aacttgctca aggccgggtt
      181 atggtaaacg atcagcggaa gataattggc cttggccacc atctcatagt gccggaagac
      241 ctcttcctcg ccgcagcgcc agtagtaggg tgggatcaag agggcggcat cgtagcccat
      301 tttccctgcc acctcagtgt gctctaacgc ttctaaggtg gtgggccccg aggtcatagc
      361 caccgcgaca agaccctggt gcttttgggc ctgatcgagg cagacctcga agcatcgcca
      421 gcgctcttcc ttggtcagat ggacgaactc cccgatggaa ggggtggtga cgatgccgtt
      481 ggccccctgg gccacgcacc aatcgacctc ggcccttaag gctccctcgt ccaagtgata
      541 ctggtcgtca aagggggtga ccagcatggc gatgatgccc tctatcggct ttctggctgt
      601 catagctgac tccttaccaa gatttagtgg ccctcggcta ctcactcggt gcctaggtta
      661 tgggcgcatc gaaccagaag atggcctgac cggtgccaat ggccgcttcg tagtcgccgt
      721 actggatgcc cggggaggtg aagctcgcct ggcctagcgc tcctatcatc atcaggtaat
      781 gagcgaagcg cccctcgggc gagcacttct ctcgaaactc ctcggccaag acgatgacgt
      841 cggcgtggcg accctgcttg agcaaatcaa tgatcttgag gtcatactcg cggttgatgg
      901 gcgaggagat ctcctcgggc gaagccgacg catgggagtg gatggtgtcg aagggccaga
      961 acgtgtggga gaggcctccc gaggcgacca agaccaccca gcggccgctc ttcttgatgg
     1021 cccggccgat cagctcgcca aagcgcaaat cgttgtgaac cgaagaggta tagaggatac
     1081 tcaagggtag aatccgctta ttgcggtgcg gattgaagta atgcatcggg ttaagcgtcc
     1141 cgtagtgaat cggaagcccc ttatgagccg
//
LOCUS       DASQSL010001059         1257 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_60929, whole genome shotgun sequence.
ACCESSION   DASQSL010001059 DASQSL010000000
VERSION     DASQSL010001059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1257
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60929"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..476
                     /locus_tag="VE844_10950"
     CDS             <1..476
                     /locus_tag="VE844_10950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01846.1"
                     /translation="ELLPAGFEQGFVFHDKTWSIKQRVLTRRLRLIATGQLYPVRPSF
                     LMPSMSAWTEMVERGLYLRQWGVPFDALAYLFGRDAMFWYRAEVALGRPSLVGTLVKF
                     LEKLPEHLLAEEKHTWLEGHKRYLSTTVAGGCLRGASHRRIVGATDLGDTSRARL"
     gene            614..1180
                     /locus_tag="VE844_10955"
     CDS             614..1180
                     /locus_tag="VE844_10955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007146460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01847.1"
                     /translation="MASSSHYATGPQSKGPVWASWLGVITIVFGIFLTASHGNEWMKQ
                     AVITHSMPASGEMSAADCPPEELEEEGLSLAECEHMVANVKGIALSAPDWFPGFQMVL
                     SGIGTVIAFLSIIVGAALVNYRGWAPTVAILTFAALIAIDVIGFMAAVDAGPILRQIY
                     LGDILLWFFIHLIMIVAAVAGRHGESTS"
BASE COUNT          256 a          338 c          367 g          296 t
ORIGIN      
        1 cagagctgtt acctgcgggt ttcgagcaag gcttcgtgtt ccacgacaag acctggtcca
       61 tcaagcagcg ggttctgaca cgccgactgc ggcttatagc cacggggcaa ctctacccgg
      121 tacgcccctc ctttctgatg ccctctatga gcgcctggac cgagatggtc gagcgcggtc
      181 tatatctgcg gcagtggggc gttcccttcg atgcgctggc ttacctattc ggacgcgatg
      241 cgatgttttg gtatcgcgcc gaggtggcct tgggccgccc ctccctggtc gggacccttg
      301 tcaaattcct cgagaagctg cccgagcatc tcctcgccga ggagaagcac acctggttgg
      361 agggacacaa gcgctaccta tcgaccaccg tggcaggcgg ttgcctacgg ggagcgagcc
      421 atcggcgtat agtaggggcc acggatctcg gtgatacctc gcgtgcgagg ctttgactgg
      481 cattggttaa tgcgtaagaa ctggtatacg cgttcattga ccatggaaga taccctcctt
      541 tacttgactc aataggcgag tcagctcggt tacagaaatc gactcgaggt ttacgcaaaa
      601 aagcaggtgc tgcatggcat catcttccca ctatgcaacc ggcccgcagt ctaaaggtcc
      661 tgtctgggcc agctggctcg gtgtcatcac cattgttttc ggcattttcc tgaccgcgtc
      721 ccatggcaat gaatggatga aacaagccgt catcacccat tccatgccgg ccagcggtga
      781 gatgtcggcc gcggattgtc ccccggaaga gctggaagag gaagggctga gcttggccga
      841 gtgcgagcac atggttgcga atgtcaaagg tatagccctt tcggcgccgg actggttccc
      901 aggttttcag atggtgctgt ccgggatcgg cactgtcatt gcgtttttat ccatcattgt
      961 cggtgctgca ctggttaact atcggggctg ggccccgacc gtggcaatat taacttttgc
     1021 agcgctgata gcgatcgatg tcatcggctt tatggcggcg gtggatgcgg gaccgatatt
     1081 aagacagatc tacctggggg acattctgct ctggttcttt attcatttga taatgatagt
     1141 ggccgctgtc gccggtcgcc acggcgagag tactagctag cacacaggta cgggtcaatg
     1201 tctcgcacaa ttcaaagact gagtttcaaa aaacggaatc cgttatgcaa agacaag
//
LOCUS       DASQSL010001060         1426 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_60930, whole genome shotgun sequence.
ACCESSION   DASQSL010001060 DASQSL010000000
VERSION     DASQSL010001060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1426
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60930"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(49..1254)
                     /locus_tag="VE844_10960"
     CDS             complement(49..1254)
                     /locus_tag="VE844_10960"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017365547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/NAD(P)-binding oxidoreductase"
                     /protein_id="HZC01848.1"
                     /translation="MSEQGYSYVIVGGGLAGASAVEGIRERDKSGSILLIGREEHLPY
                     HRPPLSKQLWFGKKQVEDIYIHDQAFYDQNGVSLAPGIEIVALDAQRKTVTEASGRSF
                     RYEKLLLATGGSPRTLSIPGGDLHGICYYRTLDDYLRTRGEAAEGKKALVIGGGFIGS
                     EIAAALNFNKLDVTMIFPSHYLVSRVFPEDLGQAIQSRYLERGIKILLGDRPASFTRS
                     GDRFMVRTSGGRELESELVIVGAGILPEVKLAEGAGLQVANGIRVNHYLQSSHPDIYA
                     AGDNALFPYAVLGQEMRIEHWDNALNQGRWAGRNMAGANESFTYMPYFFSDLFEFGYE
                     AVGEVSSELETVADWQKEYDTGVIYYLKGGRVRGAMMCNVWDKVEAARELIRKGEQVT
                     PVSLRGAIH"
BASE COUNT          306 a          423 c          383 g          314 t
ORIGIN      
        1 tgtggatggc attgtggcac tttttataga ccactggcgt cggtcgtgtc agtgaattgc
       61 gcctcgcaag cttaccgggg tgacctgttc acccttgcgg atcagctccc gagccgcttc
      121 gaccttatcc cagacgttgc acatcatcgc gcctcggacc cggccgccct tgagataata
      181 aataacgccc gtatcgtatt ctttctgcca gtcggctacg gtctcaagct cagagctaac
      241 ctcaccgacc gcctcatagc caaactcgaa gagatcggag aagaagtagg gcatatacgt
      301 gaacgactca ttggcccccg ccatgttacg gcccgcccat ctcccctggt tgagagcgtt
      361 atcccagtgc tcgatgcgca tctcttgccc taataccgca taggggaata gggcattatc
      421 cccggcggca taaatatcgg ggtgggaact ctgaagatag tggtttaccc gaatcccatt
      481 agcaacctgc aagcccgccc cttcggcgag cttgacctcg gggaggatac ccgcgccgac
      541 gatgacaagc tccgattcga gttccctgcc acctgaggtg cgcaccataa atcgatcgcc
      601 gcttcgcgta aacgaggcag gacgatcgcc cagcaggatc ttgatcccgc gctccaggta
      661 gcggctctgg atcgcctgcc ccagatcctc agggaacacg cggcttacca gatagtgaga
      721 gggaaagatc atagtgacat cgagcttgtt aaagttgagg gcagcggcga tctccgaacc
      781 aatgaacccg ccgccgatga cgagcgcctt tttcccctcg gcggcttcgc ccctcgttct
      841 caggtagtca tcgagagtgc ggtaatagca gatcccgtgg agatcgcctc ctgggatgga
      901 cagcgtccgg ggactgccgc cagtcgccag caggagcttc tcgtagcgaa agcttcgccc
      961 gctggcctct gtgactgtct ttctctgggc atcgagggcg acgatctcga tgcccggcgc
     1021 taagctgacg ccgttctgat cgtagaatgc ctggtcatga atatagatgt cttcaacctg
     1081 ctttttgccg aaccacagct gcttggagag cggaggtcga tggtagggaa gatgttcctc
     1141 gcggccaatc agcaggatag agccgctctt gtcacgctcc cggatccctt ccacggccga
     1201 tgcgcccgcc agtccaccgc caacgatcac ataggaatag ccttgttctg acatgattta
     1261 tctcctccaa tggccatctg attgagcaag tcttctttga gttagatcac ctggttaaca
     1321 cctcgttcat acagacgcgg cggctgcaaa atccttatgc gagtatatat tagagcatgt
     1381 cgcagaaata gatgatcgcg ggcacgcatt tctaagtgaa aggagc
//
LOCUS       DASQSL010001061         1152 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_48071, whole genome shotgun sequence.
ACCESSION   DASQSL010001061 DASQSL010000000
VERSION     DASQSL010001061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1152
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48071"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1152
                     /gene="glgP"
                     /locus_tag="VE844_10965"
     CDS             <1..>1152
                     /gene="glgP"
                     /locus_tag="VE844_10965"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015337960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004645 - 1,4-alpha-oligoglucan
                     phosphorylase activity [Evidence IEA];
                     GO_process: GO:0005977 - glycogen metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan family
                     phosphorylase"
                     /protein_id="HZC01849.1"
                     /translation="NERDAALGNGGLGRLAACFLDSLATLDMPGYGYGINYEYGLFKQ
                     EIEGGYQREQPDNWLAHGTPWQIERPDEAYLIPVYGRVERTLDGAGRYARRWVDAQVL
                     IGIPCDMPVVGYGGRTVNFLRLYSARSSHEFDMQIFNQGDYLKAVEMKIATEIISKVL
                     YPSDSVKAGRELRLVQEYFLVACAIRDIVRRYLIDHQSFDQFSSKVAIQLNDTHPALA
                     VAELMRMLVDEYEVPWSTAWEITQATLGYTNHTLLPEAMEKWPVSLLEYVLPRHMQII
                     YDINYEFLQRVAAVWPGDLDRMRRMSLIEESEQKQVHMAHLAIVGSHAVNGVAALHTE
                     LVKTSLVPDFYQLWPERFNNKTNGVTQRRWLLQANCHLAHLLCDTIGESW"
BASE COUNT          236 a          298 c          338 g          280 t
ORIGIN      
        1 aacgagcgcg atgcggctct cggcaacggc ggtctgggtc ggctggcggc ctgctttctc
       61 gattccctgg ctaccctgga tatgccgggt tatggctatg ggatcaatta tgagtatgga
      121 cttttcaagc aggagatcga aggcggttat cagcgcgaac agccggataa ctggctggcg
      181 catggcactc cctggcagat tgagcgcccg gacgaggcgt acctgattcc cgtgtatggg
      241 cgagtcgagc ggacattgga cggcgctggc cgttacgccc gacgatgggt ggatgcacag
      301 gtactgattg gtataccatg tgatatgcca gtggtcggct atggtggccg gactgtgaat
      361 tttctccgcc tctattcggc ccgttcctcg catgagtttg acatgcagat cttcaatcaa
      421 ggggattact tgaaggccgt tgagatgaag atcgccacag agattatctc gaaggtgctt
      481 tatccttccg attcggtcaa agccggtcgg gagctccgtt tggtgcagga atactttcta
      541 gtggcctgtg ccatccggga tattgtgaga cgctatctca ttgaccatca gtcgttcgat
      601 cagttttcat ctaaagtggc cattcagctc aacgataccc accccgcctt ggctgtcgca
      661 gaattgatgc gcatgctcgt tgacgaatat gaggtgccat ggagcactgc ttgggagatc
      721 acccaggcga ctctcgggta caccaatcac actctcttgc cagaggccat ggagaaatgg
      781 cctgtgtcct tactggaata tgtcctgcca cggcatatgc agatcattta cgacattaac
      841 tacgaatttc tgcagcgcgt cgctgcggta tggccgggag acctggaccg catgcggcgc
      901 atgtcgctga tcgaagagag tgagcagaaa caggtgcaca tggcccatct tgctattgtc
      961 ggcagccatg ccgtcaatgg ggttgcagcc ctgcatacgg agttggtgaa gacctcgttg
     1021 gtgcccgact tttatcagct ctggcccgag cgctttaaca ataagaccaa cggtgtcacc
     1081 cagcgtcgtt ggctgttgca ggccaattgc cacctggctc atttgctgtg cgataccatc
     1141 ggtgaaagct gg
//
LOCUS       DASQSL010001062         1543 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_76429, whole genome shotgun sequence.
ACCESSION   DASQSL010001062 DASQSL010000000
VERSION     DASQSL010001062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1543
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76429"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(277..777)
                     /locus_tag="VE844_10970"
     CDS             complement(277..777)
                     /locus_tag="VE844_10970"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZC01850.1"
                     /translation="MSHTPKYLGHVNIFVRNAERSQRWYADVLGLHTYDLIPGRAAFM
                     SADLEQSHEVALIEVGDDAPGPQKGQVGLNHMAWMMHSLDDLKEIYQRLKDKNIPIDR
                     VSDHGISVGIYFRDPDGNGIEVSYELPRHEWPRQDHVFSGEGRPRGRFPGPWDEHLAE
                     RQLVTR"
     gene            1075..>1543
                     /locus_tag="VE844_10975"
     CDS             1075..>1543
                     /locus_tag="VE844_10975"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HZC01851.1"
                     /translation="MKFGVCLPNNWGLEDVQAIFLLAVRAEELGFDSVWVSEHVFNVS
                     YVYERIGSKPYYEPLTILSYVAAMTKRVALGTSVLVLPYHNPIRLAKVAATLDVMSAG
                     RLILGVGVGVIPQELQAMGSPFAERGAITDEAIAVMKTLWTQDDPQFEGRYHRF"
BASE COUNT          302 a          451 c          460 g          330 t
ORIGIN      
        1 ggtcagagac gggacaaatt gtcggcggca accgccgtgc tgcgggtggg gagaccaggg
       61 gcttcgactc caatgcattg cctgccagga gactgcgcca gcttcttggt atacactgct
      121 caggcagccc agctggctgc attcacctga tgcctgggag atgcctcctg cgcagtgtct
      181 acggagggat atgacgaacc gccccgggcg cttaacgtgc agcagagcac ctgccagctg
      241 tctccccgtg tcgataatac tacgaggtct tccccgtcac cgtgtcacta attgccgttc
      301 ggcaaggtgc tcgtcccagg ggccagggaa acgcccgcgc ggtcgcccct cgccggagaa
      361 cacgtgatcc tgtcggggcc attcgtgccg cggcagctcg taggagacct cgatgccgtt
      421 gccgtcaggg tcgcggaaat agatgccgac ggagatcccg tgatcggaca cgcgatcgat
      481 tgggatgttt ttgtctttaa gccgttggta gatctccttc aagtcgtcaa ggctgtgcat
      541 catccaggcc atatgattca ggccaacctg tcccttttgc ggaccgggcg catcgtcgcc
      601 cacctcgatg agcgccacct cgtgggactg ctccaggtcg gccgacatga acgcggcgcg
      661 gccggggatc aagtcatacg tatgtagccc tagcacatcc gcataccagc gttgggaacg
      721 ctcggcgttg cgcacgaaaa tgttgacgtg tccgagatat ttcggcgtgt gactcatata
      781 ccctcctcct ctgcgcaatg ttggcctgta cccttgacgg tatcatataa tgaaatcatc
      841 atgcaagcct ggatataccc ccccggcgtg aactggttcc ccatctcgtc tcccatgata
      901 tcactgcgcc tcgataggag aggagacagg tctcacatcc catccttcct ccctcttctc
      961 cgttcttccc catcctcgca gggatgaggg aatagccgag gggggagaag catacggcct
     1021 caagacggtc agaggtccgc cgggatgata gcgcaccata caggaggaag aggcatgaaa
     1081 ttcggcgtat gtttgcctaa taattggggc cttgaagacg tgcaggccat tttcctgttg
     1141 gcggtcagag ctgaggagtt gggatttgat tccgtctggg tgagtgagca cgttttcaat
     1201 gtgagctacg tctacgagcg gatcggcagc aaaccctact acgaacctct caccatcttg
     1261 agctatgtcg ccgccatgac gaagcgggtg gcgttgggga catcggtgct cgtcttgccg
     1321 tatcacaacc ctatcaggct ggccaaagtt gccgcaaccc tggacgtcat gtccgccggt
     1381 aggctgatcc tgggcgtcgg tgtcggggtg atcccgcagg agttgcaggc catgggcagt
     1441 ccctttgccg agcgcggcgc catcaccgat gaggcgattg ccgtcatgaa aacgctgtgg
     1501 acgcaggacg acccccaatt tgaggggagg tatcaccgtt tca
//
LOCUS       DASQSL010001063         1317 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_103099, whole genome shotgun sequence.
ACCESSION   DASQSL010001063 DASQSL010000000
VERSION     DASQSL010001063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103099"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(89..163)
                     /locus_tag="VE844_10980"
     tRNA            complement(89..163)
                     /locus_tag="VE844_10980"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(129..131),aa:Val,seq:gac)
     gene            complement(242..859)
                     /gene="clpP"
                     /locus_tag="VE844_10985"
     CDS             complement(242..859)
                     /gene="clpP"
                     /locus_tag="VE844_10985"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013821536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HZC01852.1"
                     /translation="MVLVPMVIEQTNRGERAYDIYSRLLKDRIIFLGTPIDDHIANLM
                     IAQMLFLEADDPEQDIFLYVNSPGGYVTAGLAIYDTMQYIRPDVSTICIGQAASMGAL
                     LLTAGAKGKRYSLPHSRIMIHQPAGGFQGQASDIDIQAREILRMKENLDQIMAKHTGQ
                     DIERIKRDTDRDFFMSGEQAREYGIVDDVITMRGPRKLFESPKSS"
     gene            complement(890..>1317)
                     /locus_tag="VE844_10990"
     CDS             complement(890..>1317)
                     /locus_tag="VE844_10990"
                     /inference="COORDINATES: protein motif:HMM:NF017509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01853.1"
                     /translation="NPFELPPGMVDAETEALTADVQRQLRPQQEDAAAPQITEEMRQQ
                     LRDQAVSRIKRELLIEEIAKREGITVEDSDVEADLKRLAERTEQRIEYIRRQMEQAGA
                     LESIRRNIKSDKVLDFVVGRCTVSEVSKPATPEPSSTQS"
BASE COUNT          247 a          381 c          368 g          321 t
ORIGIN      
        1 ccatgggcgc aggtccttct cgtggaggtt tcgtcctgtt gctagggagt gggagtgcag
       61 gaactccttc attcgcgacg tggagtggtg gtaggcacgg gcggtttcga accgccgacc
      121 tcttgcgcgt caagcaagcg ctctcccact gagctacgtg cctatagtcc caggtggatg
      181 gccatggtac tcagtccatc tacccgtgtc aagcaagatt ttaagtagtg ccggtccagc
      241 gttaggagct cttgggcgac tcaaacaact tgcgcgggcc acgcatggtg atcacatcgt
      301 cgacgatgcc atattccctc gcctgctccc ccgacatgaa aaagtcccgg tcagtatcgc
      361 gcttgatgcg ctcaatgtct tgtcccgtgt gcttcgccat gatctgatcc aggttttcct
      421 tcatgcgcag gatttcgcgt gcctgaatat cgatgtcact ggcttgcccc tgaaaaccac
      481 cggccggctg atggatcatg attctggagt ggggcaagct ataccgtttc cccttggcac
      541 cggcggttaa caagagagcg cccatgcttg ccgcctgccc aatgcaaatg gtcgacacat
      601 cggggcgaat gtattgcatc gtgtcgtaga tcgccagtcc agcggtgaca tagccgcccg
      661 ggctgttgac gtagagaaaa atatcctgct cagggtcatc ggcttccaag aataacatct
      721 gggcgatcat caggttggct atgtggtcat cgatcggcgt accgagaaag atgatacgat
      781 ctttgagcaa gcgcgagtag atatcgtagg cgcgctcgcc acggtttgtc tgttcaatga
      841 ccatcggtac taacaccatt gtcgcttgct cctctggagg gccagcacgt taagactggg
      901 tggacgaggg ctcgggcgta gccggtttgc tcacctcgct gacagtgcat cgtccgacca
      961 caaaatccaa caccttgtcg ctcttaatat tgcgccgaat cgactcgagt gccccggctt
     1021 gctccatttg acgccggatg tactcgattc tctgctctgt ccgctctgcc aaccgcttca
     1081 ggtcggcttc cacatcacta tcctcgacgg tgatgccttc gcgcttggcg atttcctcaa
     1141 tgagcagctc acgtttaata cggctcacag cctggtcgcg caactgctgc cgcatctctt
     1201 cagtgatctg tggtgcggcg gcatcctcct gttgcggccg taactgccgt tgtacatctg
     1261 ctgtcagggc ctccgtctcg gcgtcgacca tgccaggggg gagttcgaat ggattgg
//
LOCUS       DASQSL010001064         3858 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_196337, whole genome shotgun sequence.
ACCESSION   DASQSL010001064 DASQSL010000000
VERSION     DASQSL010001064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3858
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196337"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..325
                     /locus_tag="VE844_10995"
     CDS             <1..325
                     /locus_tag="VE844_10995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01854.1"
                     /translation="DILLAIDALGDLAVTGDGMLECAPLLSSGLVEIRVRIHGPVSGH
                     GADVFKLVLSQKGQQFVSGWKAGDQAKALGATMDPLTVVRADAQKAARRSTKRYCDVD
                     NEYSR"
     gene            587..787
                     /locus_tag="VE844_11000"
     CDS             587..787
                     /locus_tag="VE844_11000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01855.1"
                     /translation="MLLSGTAGLNPSVALALSLVKRIRDMLLGIPGLVAWQAFEGRQL
                     WCRHLDRKTASLTIDPCSSSTD"
     gene            complement(861..1718)
                     /locus_tag="VE844_11005"
     CDS             complement(861..1718)
                     /locus_tag="VE844_11005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012500624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase
                     N-terminal domain-containing protein"
                     /protein_id="HZC01856.1"
                     /translation="MMEDQQQILKERAHRVRRHIIRLATDGGCFIGASLSCVDILTYL
                     YGGWLNIDAEHLEDPNRDYLLLSKGHDVPALYGLFAELGFIDPRRLANHLKTHDHIYW
                     HPNRNIPGVEFHSGSLGHLLSVGIGIAMDIKLHRGSNRVVVILGDGELNEGSVWEAVL
                     IAAAKGLDNLVAIVDRNAFQANVATEDLIPLEPLEDKFRAFGWGARRVDGHDFQALEH
                     GLAQIPQVTGKPTAVVADTVRGKGLPSISARADRWFCNFSPQEIEMLLEELEGTCEAQ
                     LKTEVIVAR"
     gene            complement(1737..2573)
                     /locus_tag="VE844_11010"
     CDS             complement(1737..2573)
                     /locus_tag="VE844_11010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014560383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family protein"
                     /protein_id="HZC01857.1"
                     /translation="MSDLQDSHCATPLIVVQARLGSTRYPGKVLLDLAGEPLIARLIE
                     RIRRIETPAKILVATTTESQDDRLAKVCRAAGIEVFRGHPTDLLDRHYQAALEYGAKI
                     VAKVPSDCPLIDPAIIDQVFERFTEAACDYASDLHPASYPDGNDVEVMRFEALKMAWQ
                     EASLPLEREHTTPFIWERPERFRLANVVWEPGPDGTLPRDYSMSHRWTIDYPEDYVFI
                     RRVYQELYPLNPAFGLYDILDLLERKPDIHALNARYAGVNWYRHHLGELKTITARETR
                     II"
     gene            complement(2570..3049)
                     /locus_tag="VE844_11015"
     CDS             complement(2570..3049)
                     /locus_tag="VE844_11015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01858.1"
                     /translation="MWLLKVTGIPNFDDCASHLDNDFPHKDYVLVATSDMRETYRYEN
                     RRRFIEKANRLADGRQLIFKFHPNENTARAAREVERYSPGAFFFSHGNTDHMVANCNT
                     LVARYSSVVYVAVALGKEVYSDLPLEDLQRLVPIQNGGRSAANIAAECLKLFNGAMD"
     gene            complement(3009..3479)
                     /locus_tag="VE844_11020"
     CDS             complement(3009..3479)
                     /locus_tag="VE844_11020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01859.1"
                     /translation="MKALYICGSLNQTKMMHKIAQHLSQFEAYFTPYFCDGWMRILQK
                     QGWLDFTVLGGKFVELTLSYLYEHGVVLDYEGHKGPYDLVVTCSDLLVPKRVRNAKLV
                     LVQEGMTDPENLAYRLVKTLRLPRYLASTATTGLSDAYDIFCVASEGYRDPQFR"
BASE COUNT          850 a         1058 c         1117 g          833 t
ORIGIN      
        1 tgatattctt ctggcaattg atgctcttgg ggacttggcc gtgactggtg atggaatgtt
       61 ggaatgtgcc ccactcctct cttcgggtct tgttgaaatc agggtgcgta tccatggtcc
      121 cgtgagcggc cacggcgctg acgtgttcaa gctcgtgctt tcacagaaag gccagcaatt
      181 tgtcagtggc tggaaggcgg gcgatcaggc caaggcactc ggagcgacga tggaccctct
      241 aactgtagtt cgagcggacg cgcaaaaagc tgcgcgccgc tcaacaaaac gttactgcga
      301 cgtcgacaac gagtactcga ggtaaacgag gaggtatcat gcttcgcccc tgccctgccc
      361 acgacagggg cgaagcatct ctgagacgat acgtccatcc agccggtttg caggtaaccg
      421 ctcctctcca ccaaccgttg tttccctgcg catcatcggg gtgggcgtgg tgcgcccgcg
      481 aggcaccgcc tgcgatatcg gcgcgtatga aaaagaattc acttacaact gtagtggctt
      541 cttctgctgt ccccccgccg gtcttgggat ccaggaggtt agcctcatgc ttttaagtgg
      601 tactgccggg ctgaacccaa gcgtcgcgct cgcgctttct ctggtcaaac ggatccggga
      661 tatgctcttg ggtatccccg gtcttgtggc ctggcaggcc tttgagggca gacaattgtg
      721 gtgccgccac ttggatcgca agaccgcgag cttgactata gacccatgct catcctctac
      781 agactgagct taagcccgac ccaactccca gaggtctacc atgtgcggtt tcaatcgcgc
      841 caataccgca tggagctgcg ctaacgcgcc acgatcacct cggtcttaag ctgagcttcg
      901 caggtaccct cgagctcctc gagcagcatc tcgatctcct ggggagagaa attgcagaac
      961 cagcggtcgg cgcgcgccga gatgctcggc agccctttac cacgtacagt atcggccacc
     1021 accgcagtag gtttgcccgt aacttggggg atctgagcta agccgtgctc gagcgcctga
     1081 aaatcatgac catctactcg cctcgcgccc cagccaaaag cgcgaaattt atcctcgagg
     1141 ggttcgagcg ggatcagatc ctcggtggcc acattggctt gaaaggcatt gcggtcgacg
     1201 atagcaacca ggttgtctaa accctttgcg gcggcgatga gcaccgcctc ccaaaccgaa
     1261 ccctcgttta actcgccatc gccgaggatc accaccaccc ggttagagcc acgatggagc
     1321 ttgatgtcca tggcgatgcc gatacccaca cttaagagat gccccaggga accggagtgg
     1381 aactcgacac ctgggatgtt gcgattggga tgccagtaga tgtggtcatg ggttttgaga
     1441 tggttggcca atcttctggg atcgatgaag ccaagctcgg cgaagaggcc atagagcgcg
     1501 ggtacgtcat ggcctttgga aagcagcaga taatcgcggt taggatcctc aaggtgctcg
     1561 gcatcgatat tcaaccaccc tccataaaga taggtcagga tatcgacaca ggagagtgaa
     1621 gcgccgatga agcagccccc atcggtggcc agcctgatga tatgccggcg cacccggtgc
     1681 gcccgttctt tgaggatctg ttgttgatct tccatcattg aatgccctgt tatctttcaa
     1741 atgatccggg tctcgcgcgc tgtgatcgtc ttaagctcac cgagatggtg ccggtaccaa
     1801 ttgacaccgg cgtatcttgc attgagcgca tggatatcgg gtttgcgctc gagcagatcg
     1861 aggatatcat acagcccgaa cgctgggttc agcggataga gttcctggta aacccggcgg
     1921 atgaatacat agtcctcggg gtagtcgatg gtccagcgat gcgacatcga ataatcccgt
     1981 ggtagggtgc catccggtcc aggttcccag acgacgttgg cgaggcggaa acgctcaggc
     2041 cgctcccaga taaagggggt ggtatgttcc cgctccagtg gcaagctcgc ctcctgccag
     2101 gccatcttga gcgcctcaaa gcgcatcacc tcgacatcgt tgccatcggg ataagaggcg
     2161 gggtgcagat cactggcgta gtcgcacgcg gcctctgtga aacgctcaaa cacctggtcg
     2221 atgatagccg ggtcgatgag cggacaatcg gagggtacct tggcaacgat cttagcacca
     2281 tactcgagtg ccgcctgata gtgccgatcc aggaggtcgg ttggatggcc gcggaatacc
     2341 tcgatgccgg ctgcccggca gaccttagcc agcctgtcgt cttgagactc ggtggtggtc
     2401 gccaccagga tcttggccgg cgtttcgatg cgcctgatgc gctcgatcag ccgtgcgatc
     2461 agcggctctc ccgcgagatc caaaagcacc ttgccggggt agcgggtcga gccgaggcga
     2521 gcctgtacca caattaaggg ggtcgcgcag tggctgtcct gcaaatcact caatccatcg
     2581 ctccgttaaa tagcttgaga cactcggcgg cgatattggc cgccgatcgg ccgccatttt
     2641 ggatgggcac gaggcgctgc agatcttcca ggggcagatc cgagtacact tctttgccta
     2701 aagctaccgc cacgtacacc acggaggaat agcgggccac caaggtatta cagttagcga
     2761 ccatgtgatc ggtgttgccg tggctgaaaa agaacgcccc tggcgaatag cgctccacct
     2821 cgcgggcggc gcgcgcggtg ttctcattgg gatggaactt aaagatcagc tgtcttccat
     2881 cggcaagccg gttggccttt tcaatgaatc tacgccgatt ctcatagcgg taagtctcgc
     2941 gcatgtcgga ggtggctaca agcacataat ctttatgggg gaaatcattg tccaagtggg
     3001 aggcgcagtc atcgaaattg gggatcccgg taaccttcag aagccacaca gaagatgtca
     3061 taggcatccg atagcccggt cgttgcagtg cttgccagat agcgcggtaa gcgcaaggtt
     3121 ttgaccaggc gataggcgag gttttcggga tcggtcatac cctcctgaac caacacgagc
     3181 ttggcgttac gtacccgctt gggcaccagt agatcgctac aggtcaccac cagatcataa
     3241 ggacccttat ggccttcgta atcgaggacc acgccgtgtt cataaagata actcagggtg
     3301 agttcgacga atttgccgcc gagcactgtg aagtcaagcc acccctgttt ctgtaagatc
     3361 cgcatccagc catcgcaaaa ataaggtgtg aaataggcct cgaactggga aagatgctgc
     3421 gcgatcttgt gcatcatctt cgtttgattg agggagccgc agatgtatag ggccttcata
     3481 gggcgagcgt tgttattgat tactcattaa gcaacataag catgacaatc tgattacaca
     3541 gcgggcggat gtttcaattt taaagcttat ttgcctcaat tccagtaacc cgtggctacc
     3601 tgtgagcggg atcccggtat cgcccgcccc ggccagtatc aacatgcgga cgtggcagcg
     3661 ggagaggggg gatcctcctc ttcgcaagca aaacgttgct atagactagc ctaaatcgga
     3721 taccctgagg gaactaaata agctcaggac ttgcttcgag atagagcaac gctgagcaat
     3781 gcggtgcgag agcttcgcaa cggattgagg gatggtattg gctagaaggg aacgattcgc
     3841 aggttggaat cgtaatta
//
LOCUS       DASQSL010001065         3543 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_196339, whole genome shotgun sequence.
ACCESSION   DASQSL010001065 DASQSL010000000
VERSION     DASQSL010001065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3543
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196339"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(132..803)
                     /locus_tag="VE844_11025"
     CDS             complement(132..803)
                     /locus_tag="VE844_11025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014707071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HZC01860.1"
                     /translation="MNSTQYTIARSEVSVLATNKVIRNTYVLLAMTLLFSALTAGLSM
                     TFNLPYPGLLVTLVGYFGLLFLTTKLRNSVWGLVSIFALTGFMGLTLGPIINLYLTKF
                     TNGAELVMMAMGGTGLIFLGLSGYALSTRKDFSFLGGFLMVGILVGFLAGLGAIFFQL
                     PGLALAVSSMFVLLMAGLILYQTSEIIHGGETNYIMATITLYVSIYNLFTSLLHLLGV
                     FGGDE"
     gene            877..1593
                     /locus_tag="VE844_11030"
                     /pseudo
     CDS             877..1593
                     /locus_tag="VE844_11030"
                     /inference="COORDINATES: protein motif:HMM:NF014193.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SURF1 family protein"
     gene            1623..2171
                     /gene="fabA"
                     /locus_tag="VE844_11035"
     CDS             1623..2171
                     /gene="fabA"
                     /locus_tag="VE844_11035"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010132163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019171 -
                     (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     FabA"
                     /protein_id="HZC01861.1"
                     /translation="MTIKTTKTTFGFQRQDHYTKNELLACGRGELFGPGNAQLPLPNM
                     LMFDRITHIAERGGTADKGEIIAELDITPDLWFFGCHFLGDPVMPGCLGLDAMWQLVG
                     FFIAWLGGPGRGRALGADEVKFSGQVTPNNKLVTYRIDMKRVVMRRLFMGVADGYMEV
                     DGKQIYTAKNLRVGLFTSTETF"
     gene            2193..3416
                     /gene="fabB"
                     /locus_tag="VE844_11040"
     CDS             2193..3416
                     /gene="fabB"
                     /locus_tag="VE844_11040"
                     /EC_number="2.3.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019867681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase I"
                     /protein_id="HZC01862.1"
                     /translation="MTRQVVITGLGIVCSIGNNKAEVLESLKRGRSGIEYHQEYADLG
                     FRSQVHGPIRLNLEALIDRKFKRFMGDCTAYSYLAMNQAIEDAGLGEEHISHPQTGLI
                     IGSGGSSTANMLLATDTLRAKGARKVGPTMVPRIMASGISACLSVVFRIQGLSYSISS
                     ACATSAHCIGNAYELIQTGKQDIMFAGGGEEVHWTDTLLFDAMGALSSEYNHTPETAS
                     RPYDATRDGFVISGGGGMLVLEEMEHAKQRGARIYAEISGYGASSDGYDMVKPSGEGA
                     VRCMRLALQGIEAPIDYINAHGTSTPAGDIAELNAIKEVFRDRRRLPIISSTKSLTGH
                     ALGAAGVHEAIYSLIMLEHDFICASANITHLDEQAKGMPIALERVDHARLTTVMSNSF
                     GFGGTNATLVFQRYS"
     gene            3431..>3543
                     /locus_tag="VE844_11045"
     CDS             3431..>3543
                     /locus_tag="VE844_11045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016249517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase domain-containing protein"
                     /protein_id="HZC01863.1"
                     /translation="MKVHILGVCGTFMGGIAILAKELAFEVSGSDAQVYPP"
BASE COUNT          823 a          945 c         1000 g          775 t
ORIGIN      
        1 cgttgtctct gtagccgtca gcgccgccat accttaagtg gctctcagga gcgtgtatct
       61 ataatcgcgg tggagacggc ttacgctgac tcgacaaatg gcaggtcaat tgccaaatga
      121 cccactagta ctcactcatc cccgccaaac acaccgagca ggtgtaaaag actggtgaag
      181 agattataga tcgacacata gagggtaatc gtcgccatga tataattggt ctcgccgcca
      241 tggatgatct cgctggtttg gtagagaata agcccggcca tcaacagcac gaacatcgaa
      301 gacacggcaa gcgccagtcc gggcagctga aagaaaatcg cacctaggcc cgcaaggaag
      361 cccaccagga tccctaccat caagaatccg cccagaaagc tgaaatcctt gcgggtagag
      421 agcgcatagc ctgaaagtcc aaggaagatc aagccggtac cgcccatggc catcatcacg
      481 agctctgctc cattagtgaa tttggtgaga taaagattga tgatgggtcc cagggtcaag
      541 cccatgaaac cggtcagggc aaagatagaa accaggcccc agacactgtt tctaagcttg
      601 gtggtaagaa ataacagacc aaaataaccg accagcgtca ctaatagacc aggataggga
      661 agattgaagg tcatcgagag acccgcggtc aatgcgctga acaataaagt catcgccagc
      721 aagacatagg tgttccgaat caccttattg gtggcaagga cggacacctc ggagcgggcg
      781 attgtgtatt gagtcgaatt cataagaaaa tcctccaaac gtagagatga tacttaacta
      841 ctaataatac ctgtgaataa ctgagaagtt caacctatgt ttcggtcaaa gcttaccttg
      901 acgctcatcg cccttttatc ggtactgttc tttacccgtt tgggcttttg gcagctagag
      961 cgtgctcaac aaaagcaggc tttaagagca gctgtgtaat cgcgcaccga gctaccgccc
     1021 ttggtattgc atgatttatt atccaatcat gaagaattac gctttcgcaa ggtgctcgca
     1081 cgggggacct tcgaccccaa gcagcagatc ttgcttgaca accgcaccta tcaggggcgg
     1141 gcaggttatc atgtggtgac acccttgcgc ctctcggcaa gcgggatacg ggtgctcgtc
     1201 aatcgtggct gggtggagct aggcaggagc cgcgctgaac tgccggtagt cccgccgccg
     1261 caaggggagg tagcgatcca tgggatcatc gagatacctt cgatcccgcc gaatattttt
     1321 ggtatgctga gtcaaccggg ccccgcctgg ggcaaccgat ggccttatct ggatctcgat
     1381 tattttcaag cgcggacggg cactatcctc cagccctttt tgatcctcca agacccaccg
     1441 gatccgggcg gcttggtccg ggtttggtca caacttaaga tcaggcatga gacccatatc
     1501 ggctacgcta tccagtggtt tgcctttgcc gcgatggtgc tggtgattta cctacgaatg
     1561 gccttgcgct acgctgaacc tgaacggcaa tgataccgat tgaagatggt tcctgcgcaa
     1621 gcatgacaat taaaacgact aaaacgacgt ttggtttcca gaggcaagat cactatacca
     1681 aaaacgaact tctggcctgt gggcgcggtg aactgtttgg ccccggcaat gctcaattac
     1741 cgctgccgaa tatgctcatg tttgatcgca ttacccacat tgccgagcga gggggtacgg
     1801 cggacaaggg tgagatcatc gctgagctcg atatcacccc ggatctttgg tttttcggct
     1861 gtcattttct gggtgatccg gtgatgccgg gatgtcttgg gctcgatgcg atgtggcaat
     1921 tggtgggctt ttttatcgcc tggctcgggg gtcccggccg gggccgtgcg ctcggggccg
     1981 acgaggtcaa atttagcggc caggtgaccc caaacaataa actggtcacc taccgtatcg
     2041 atatgaaacg cgtagtcatg cgcaggctat ttatgggggt tgcggatggc tatatggagg
     2101 tagacggtaa gcagatctat accgccaaga atctcagggt tggacttttt acgtcaacgg
     2161 agacctttta ggggtcgtga ggacagtgca ctatgacaag gcaagtggta attaccggac
     2221 tcgggatcgt ttgcagcatt ggcaataata aggccgaggt cctcgagtcc ttgaagcgag
     2281 ggcgatcggg gatcgagtat catcaagagt atgcggatct cggtttccgc tcccaggtcc
     2341 atgggccgat ccggctgaac ctcgaggcgc tgatagaccg caaattcaaa cgctttatgg
     2401 gcgactgcac ggcctatagc tatctggcca tgaaccaagc catcgaggac gcgggccttg
     2461 gtgaggagca catctcgcat ccgcagacag gcttgatcat cggctcgggg ggctcgtcca
     2521 ccgcaaacat gctgctcgcc actgacacct tacgcgccaa aggtgcgcgc aaggtcggtc
     2581 ccaccatggt gccccggatc atggcgagcg gcatcagcgc ctgtttatct gtggtcttcc
     2641 ggatccaggg cctgagctac tccatcagct cggcctgcgc caccagcgcc cattgcatcg
     2701 gcaacgccta tgaactgatc cagaccggca aacaggatat tatgttcgcc ggtggcggtg
     2761 aggaggtcca ttggaccgat accctcttgt tcgatgccat gggcgccctc tcttccgaat
     2821 ataatcacac gccggaaacg gcttcccgac cctatgacgc cacccgcgac ggttttgtga
     2881 tctcaggcgg aggcgggatg ctggtcttgg aagagatgga acatgccaaa caacgcggcg
     2941 cccggatcta tgctgagatc agcggctatg gcgcgagctc cgatggttac gacatggtca
     3001 agccctcggg cgagggggcg gtgcggtgta tgcgtttggc cttgcaaggt atagaggccc
     3061 cgatcgacta tatcaacgcg catggcacca gcacgccggc aggtgatatt gcggaactta
     3121 atgcgatcaa agaggtattc cgggatagga gaaggctacc catcatcagc tcgaccaagt
     3181 cgttgactgg tcatgcgctc ggtgcggcgg gcgtccatga ggcgatctat tctctaatta
     3241 tgctagagca cgacttcatc tgcgcctcgg ctaatatcac tcatctcgac gagcaggcca
     3301 agggcatgcc catcgccctt gagcgggtgg accacgctcg gctcactacc gtgatgtcga
     3361 atagcttcgg ttttggtgga accaacgcca cgctggtgtt ccagcgctat tcctgatcgg
     3421 caatcgggcg atgaaggtcc atatcttagg tgtctgcggc acctttatgg gggggatcgc
     3481 gatcctcgcc aaggaactcg ctttcgaggt cagcggttcg gacgcccagg tctatccccc
     3541 cat
//
LOCUS       DASQSL010001066         2318 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_33106, whole genome shotgun sequence.
ACCESSION   DASQSL010001066 DASQSL010000000
VERSION     DASQSL010001066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2318
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33106"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(362..2179)
                     /locus_tag="VE844_11050"
     CDS             complement(362..2179)
                     /locus_tag="VE844_11050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016354047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HZC01864.1"
                     /translation="MPRTPELEAEEIFDTLEFDRVLHAWMGRFTLDLSPASLLLAHQD
                     WLFHLLGSPSKQQDLAMRAMRKARRLTEFTLRATTDPDTPRCIEPLPQDNRFSDPAWQ
                     KWPFNIIYQGFLLYQQWWHKATTDVRGVSRHHEDVVAFMTRQVLDIFTPSNFLLTNPV
                     VLRETFQQGGMNLVRGLQNLIEDAVRAAKGQKPVGAEAFQVGETVAITPGKVVYRNRL
                     IELIQYSPNTDQVYPEPILIIPAWIMKYYILDLSPHNSLVKFLVSQGHTVFMVSWKNP
                     EAEDRDLGLEDYRELGIMAALEAINAIVPKRKVHAVGYCLGGTLLTIAAAAMARDNDD
                     RLATMTLFAAQTDFETPGEIGLFIDESQVTFLEDIMWERGYLDSKQMAGAFQLLRSND
                     LIWSRMVQDYLLGTRQPMIDLMAWNADATRMPYCMHAQYLRKFFIKNELAEGHYEVDG
                     RPIAVSDIRVPIFAVGTVKDHVAPWRSVYKIHMLADTEVTFLLTSGGHNAGIVSPPGH
                     PRRQYQVATRKEEDKYIPADAWFKQTPTKPGSWWPVWQAWLAEHSGEPVAPPPMGNAK
                     AGYKPLDDAPGRYVREDVELALESRVPALSDHQLPPVTV"
BASE COUNT          523 a          640 c          657 g          498 t
ORIGIN      
        1 atgcatctcc ggtgattgta caatcgtccc gattccagac gtctcaggat gcatcaatct
       61 caagggtgca ccccttgcag gtcgtagggt caatttgctg caaagtgacg aaccaacaca
      121 gaatacgacc accgatgtca ggggttgcta tgagtttgca acgatcagat ctgggaagaa
      181 gttccgggtc attatccagg gacctagggt accgtaaggg cggtcgcgag ggatggacgc
      241 agccttcagc tcatcggtat gcaggctgtc ttgcgattga aggtgcgcgg ctagcgataa
      301 cgccttttcc cgtccaatgg agcgcgggca tgcccgcgct cctccctaga aggtgggttt
      361 gtcagactgt cactggcggc aactgatgat cacttaatgc cggcacgcgc gactcaagcg
      421 ctaattccac atcctcacgc acataacggc caggggcatc atccaagggt ttatagcccg
      481 ccttggcgtt gcccatagga ggcggtgcaa caggctcgcc tgaatgctcc gcaagccagg
      541 cctgccatac cggccaccag gaaccaggct tggtgggggt ttgcttaaac caggcgtccg
      601 cggggatata cttgtcctct tctttgcggg tggccacctg atattgccgg cgcggatgcc
      661 cgggcggcga tacgatgccg gcgttatggc cgccgctggt cagcagaaag gtgacctcgg
      721 tatcggcgag catgtggatc ttgtacaccg aacgccacgg cgccacgtga tccttcaccg
      781 taccgaccgc gaagatcggc acgcggatat ccgagaccgc aataggccgc ccgtccactt
      841 cataatgccc ctccgcaagc tcatttttga taaagaactt gcgcagatat tgcgcgtgca
      901 tgcagtatgg catccgcgtc gcatccgcgt tccaggccat taagtcgatc atcggctggc
      961 gtgtcccgag caagtagtcc tgcaccatac gcgaccaaat aagatcattg gagcgcagta
     1021 gctgaaaggc gccggccatc tgcttgctgt cgagataacc gcgctcccac atgatatcct
     1081 caagaaacgt cacctggctc tcatcgatga acaggccgat ctcacccggc gtctcgaaat
     1141 cggtctgagc ggcaaagagc gtcattgtgg cgagccgatc atcgttatcc cgcgccatgg
     1201 cggcggcggc gatcgtgagc agggtgccgc cgaggcagta acccacagca tggaccttgc
     1261 gttttgggac gatggcgttg atcgcctcaa gcgccgccat gatgccaagt tcacggtaat
     1321 cctcaagccc caaatcacgg tcttcggctt ccgggttttt ccaggagacc atgaataccg
     1381 tatgcccttg acttactaga aacttgacga gcgagttatg cggcgacagg tccaggatgt
     1441 agtacttcat gatccaggcc gggataatca gtatcggctc aggatacacc tggtctgtgt
     1501 ttggggagta ttggatgagc tcgatgagcc ggttgcgata gaccactttg ccgggcgtaa
     1561 tcgctaccgt ttcacccacc tggaaggcct cagccccaac cggcttctgc cctttggccg
     1621 cgcgcaccgc gtcctcaata aggttctgca gtccgcgcac caggttcatg ccgccctgct
     1681 gaaaggtctc tcggagcacg accgggttgg tcagaagaaa gtttgacggg gtaaatatat
     1741 cgagcacctg gcgggtcata aaggccacga cgtcttcatg gtgacgggaa acgccacgta
     1801 cgtctgtggt cgctttatgc caccactgct ggtacaggag aaaaccctga taaatgatat
     1861 taaacggcca cttctgccag gccggatcgg agaagcggtt atcctgaggc aagggctcga
     1921 tacagcgcgg tgtatccgga tcggttgtag cccgtagcgt aaactcggta agacgacgcg
     1981 ctttacgcat ggcccgcatg gcgagatcct gctgcttact cggtgagccc aaaagatgaa
     2041 acagccagtc ttgatgggcg agcagtaaag aagccggaga gagatccaag gtaaaccggc
     2101 ccatccaggc atgcaggact cgatcaaact ccaacgtatc gaagatctcc tcagcttcaa
     2161 gttcaggggt tctaggcatc gggctgacag cttgttccat attgcatttc ctaatcgagg
     2221 taaaggaaaa aggtaaagaa aaaataaggt tctgttgcat tattaggtac tggttccgtt
     2281 taactcgtgt tttaccaatt tgagtagcaa ttagcggt
//
LOCUS       DASQSL010001067         1123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_88736, whole genome shotgun sequence.
ACCESSION   DASQSL010001067 DASQSL010000000
VERSION     DASQSL010001067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88736"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..630
                     /locus_tag="VE844_11055"
     CDS             <1..630
                     /locus_tag="VE844_11055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019866085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HZC01865.1"
                     /translation="KLVTLGRPQDLLRRRPDIRAAERNLAAATVWIGITTADLFLRVT
                     FIGSIALEANTFTGLGGSASDSYSFGPSIRWAAFDLGRVRARIEAADAGAEANLASYE
                     RTVLTALEETENALVEFGRNQVRRDLLVASAQQSEKAALHARQRFEEGVADFLTVLDA
                     ERTLLDAQDRLARSQTDTATALVAVYKGLGGGWEIATRGAQTAKHADVK"
BASE COUNT          257 a          314 c          317 g          235 t
ORIGIN      
        1 aagctcgtaa ctctcggccg tccccaagac ctgcttcggc ggcgccccga tattcgtgca
       61 gccgagcgca acctcgcggc cgccaccgtc tggattggaa tcaccaccgc cgatctcttc
      121 ctgcgcgtca ccttcatcgg cagcatcgcc ttggaggcga acaccttcac cggactgggt
      181 ggctcagcaa gcgatagcta ttccttcggt ccctccatcc gctgggccgc cttcgacctc
      241 ggacgggtgc gtgcccgtat cgaggcggcc gatgcgggtg ccgaggccaa cctcgcttcg
      301 tatgaacgca ccgtgctcac ggcgctcgag gagacggaaa atgcactggt tgagttcggt
      361 cgaaaccaag tgcggcgcga tttgctcgtg gcctcggccc agcaaagcga gaaggcggcc
      421 ttgcacgcca ggcaacgctt cgaagagggc gtggccgact tcctcaccgt gctcgatgct
      481 gagcggacct tgctcgatgc ccaagaccgc ctcgcgagga gtcaaaccga caccgcgacc
      541 gctttggtcg ctgtctacaa gggcctgggc ggcgggtggg aaatcgcgac tcgaggggcg
      601 cagactgcaa aacatgccga cgtaaagtag accgtcattg gagaaccgct gtgtattttg
      661 atgacccaag cggacacatt attgaaatac gcacttatga gaatgaagcc taactcgatg
      721 tttcagactg atcggtaata gcgacggctg agcttgagcg ttcatcgtga ttcgtaatcg
      781 ataaaggaga tgtttagatg agatatgtct ttagatcaag aacgttgagt gtttctatag
      841 agcgtcaacc tcaagaggta tatagattca tctccgaccc gcaaaacctc ccgaaatggg
      901 ccacgtcgtt ttgtcaatca gtcaaaaagt ccagggacga atggatcgtt gaaaccccac
      961 taggcccaat gaaaataagg ttcgtcgaaa ggaacgattt tggagtcttg gatcactacg
     1021 tgagcccaac gccaggtcag gagatcttga atctcatgcg cgtcgtgcca aacggtaccg
     1081 gaagtgaagt gatctttaca ttgtttcagc tgcccgagat gtc
//
LOCUS       DASQSL010001068         1005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_113781, whole genome shotgun sequence.
ACCESSION   DASQSL010001068 DASQSL010000000
VERSION     DASQSL010001068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113781"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(191..>1005)
                     /locus_tag="VE844_11060"
     CDS             complement(191..>1005)
                     /locus_tag="VE844_11060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007992651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HZC01866.1"
                     /translation="RDEFMERYKFTIAPATDDRPYFFHFFKWRTLPEVLRLKERGGLP
                     LLEWGYPVLIVTLLQAIVVSLLLVLLPLWLARKLFRDAAAPPGFTLRTAVYFTAIGLA
                     FMFIEIAFIQRFILFLSHPLYAVAVVLCAFLLFAGLGSRFSARIKKRRSVVLVVGSIG
                     AIAVLYLILLPALFQHLFNLQDIYKIAVSIALIAPLAFPMGMLFPLGLAGLANTAQAL
                     LPWAWGINACASVVAAILATAMAIHLGFTAVVIAALLLYGVAAMAFGNSFCR"
BASE COUNT          276 a          277 c          286 g          166 t
ORIGIN      
        1 gaaacggcac ggcagcccgc atagcgtggg ttgaactcgg ccgcgacata gtcagctata
       61 aaactgtatt ggttcagggc cgtaggatgg gtagagcgaa gcgataccca tcacaacccc
      121 cggtgggttt cgacctgcag cctctaccca ctctaccgcg ctttggtgct ttgcaaataa
      181 ctactcagtc ttatctgcaa aaggagttgc caaacgccat cgccgcaacc ccataaagaa
      241 gcagggccgc gatgacgacc gcagtaaacc cgagatgaat agccatggcg gtagccagaa
      301 tagcggccac caccgaggca caggcattga tcccccaggc ccaaggcagg agggcttgag
      361 ccgtatttgc aagccccgcc agcccaagcg ggaatagcat gcccatcggg aaggccaagg
      421 gcgcaatgag cgcgattgaa acggcgatct tgtaaatatc ctgcaagttg aacaagtgct
      481 gaaaaagcgc cggcagtaag atcaaataca gcaccgctat agcgccgatc gagcctacca
      541 cgagcaccac ggaacgccgc ttttttatcc gggctgaaaa ccggctgccg agcccggcaa
      601 atagcaagaa tgcgcacagt accacagcca ctgcatagag cggatgggag agaaagagga
      661 taaatctttg gatgaaggcg atctcgataa acataaaggc gagaccaatc gcggtgaagt
      721 agaccgctgt tcggagggta aagccaggcg gtgctgctgc atctcgaaac agcttgcgcg
      781 caagccacag gggcagaagc acgagcagca agctcaccac aatggcttgt aggagtgtga
      841 cgataagcac gggatagccc cattccaaga gcggcagtcc cccacgttcc ttgagcctca
      901 gcacctccgg cagggtgcgc cacttgaaaa aatggaagaa gtaaggccga tcatcggtgg
      961 ccggtgcgat agtgaacttg tagcgttcca tgaattcatc gcgct
//
LOCUS       DASQSL010001069         1398 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_185925, whole genome shotgun sequence.
ACCESSION   DASQSL010001069 DASQSL010000000
VERSION     DASQSL010001069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1398
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185925"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(24..233)
                     /locus_tag="VE844_11065"
     CDS             complement(24..233)
                     /locus_tag="VE844_11065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01867.1"
                     /translation="MALTLACVLIFIWQASLGQAGFEKILYGLGFIPALVFTDARLEP
                     DVAHARVLVFIPFGLLSRLVSLPAL"
     gene            complement(311..763)
                     /gene="dtd"
                     /locus_tag="VE844_11070"
     CDS             complement(311..763)
                     /gene="dtd"
                     /locus_tag="VE844_11070"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019569284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HZC01868.1"
                     /translation="MIGLLQRVTQARVEVAGEIIGAIDRGLLVLIGVEKGDSEAQAER
                     LLERLLGYRVFPDPVGRMNVSVKDIHGGLLLVPQFTLPADTKKGMRPSFTPAALPAEG
                     ERLFNYLLARARALHRPVAGGRFGANMQVSLTNDGPVTFWLRAAPELK"
     gene            complement(777..>1398)
                     /locus_tag="VE844_11075"
     CDS             complement(777..>1398)
                     /locus_tag="VE844_11075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018232908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HZC01869.1"
                     /translation="EQLTVDVPAETQGAVMERLGERKGDLVDMQPDGKGRVRLDYRIP
                     ARGLIGFRTEFLTLTSGTGLMYHTFDRYGPLKPGEIGNRSNGVLIAAGAGKSLGYALF
                     NLQERGRLFIGPGEEVYEGMIVGIHSRGNDLVVNPMKGKQLTNIRAAGSDENIILTPP
                     LKFDLEQALEFIDDDELMEVTPKAIRLRKKLLKEHERKRASRAAAL"
BASE COUNT          308 a          416 c          391 g          283 t
ORIGIN      
        1 aatataaacc agaaactcag gatctacaac gccggcaagc tcaccagccg cgacagcagg
       61 ccgaatggga taaaaaccag gactcgggcg tgcgccacat caggttctaa acgcgcatcg
      121 gtgaacacga gggcggggat aaaccccaga ccatagagga tcttttcaaa tccggcctgt
      181 cctagagacg cttgccagat gaagatcagc acgcatgcta gagtcaaggc cacggtaatg
      241 atcggggtta gcgtagtcga ttatcgtcgc gtagagggat catagtgggg gaagctgagc
      301 aattagatct ctattttaat tcaggagcgg cccgcaacca aaatgtcacc ggtccatcgt
      361 tggtcaggct gacttgcatg tttgcaccaa agcggccgcc ggccaccggc cgatgcaatg
      421 ccctagcgcg cgccaacaaa taattaaaca gccgctcgcc ctccgccggt agagcagcgg
      481 gggtaaagct cgggcgcatg ccttttttgg tgtcggcagg cagggtgaat tggggtacca
      541 gcaagagacc tccgtggata tccttgacac ttacattcat ccggcccacc ggatcgggga
      601 acactcgata accgagtagc cgttccaata accgctcggc ttgggcctcg ctgtcgcctt
      661 tttctacacc gatgagcacc aagagccccc ggtcgatggc cccaatgatt tcgcccgcaa
      721 cctcgacgcg cgcctgggta acccgttgca aaagaccgat catctgtctt cgcccattat
      781 agggctgctg cccgcgaagc ccgcttgcgc tcgtgttctt tcaacagctt tttacgcaac
      841 cggatcgcct tgggcgtgac ctccatcagc tcatcatcgt cgataaattc gagggcctgt
      901 tcgagatcga acttgagcgg tggggtgagg atgatgttct catcggagcc cgcggcgcgg
      961 atattggtga gttgcttgcc cttcatcggg ttgaccacca gatcgttgcc gcgcgaatgg
     1021 atgccgacga tcatgccctc atagacctct tcacccgggc cgataaatag acgcccgcgt
     1081 tcctgcagat taaagagtgc gtaacccagg ctcttgccgg ccccggcagc gatcaagacc
     1141 ccgttgctgc ggttcccgat ctcgccgggc ttcaaggggc catagcgatc gaaggtatga
     1201 tacataagcc cggtgcctga ggtgagggta agaaattctg tgcgaaaacc gatcagtccg
     1261 cgggcaggga tccgataatc gaggcgcacc cgtcccttgc catccggctg catatcaacc
     1321 aggtcgccct tgcgctcgcc taagcgctcc atcaccgcgc cctgggtttc ggcgggcaca
     1381 tcgaccgtca gttgttca
//
LOCUS       DASQSL010001070         1299 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_145489, whole genome shotgun sequence.
ACCESSION   DASQSL010001070 DASQSL010000000
VERSION     DASQSL010001070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1299)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1299)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1299
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145489"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..197
                     /locus_tag="VE844_11080"
     CDS             <1..197
                     /locus_tag="VE844_11080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01870.1"
                     /translation="STIEFDSCFMTLHLARDDQQQEQIVGMRGDIVNQERLFARSLGQ
                     FFLKRSKSLPLAGHVILAHV"
     gene            complement(188..730)
                     /locus_tag="VE844_11085"
     CDS             complement(188..730)
                     /locus_tag="VE844_11085"
                     /inference="COORDINATES: protein motif:HMM:NF024172.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01871.1"
                     /translation="MSCTKTRGKTSTPHPDPDDPPRRRANQRRGHGTYANDRPPIISI
                     ISRDTGEQRFWVGDQADRRTCAALITENIPTHSTQLYTDEWQSYRGSHPSPATVRHGV
                     HEWARDDDGDGRREVHGNTCEGAGAALRTYLRSFRGVHKRSLHLYVATYEAIVNVTRV
                     TPSLIRRMCVSHVSAHTDYT"
     gene            complement(675..1124)
                     /locus_tag="VE844_11090"
     CDS             complement(675..1124)
                     /locus_tag="VE844_11090"
                     /inference="COORDINATES: protein motif:HMM:NF024170.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01872.1"
                     /translation="MIDFPITDWLDDASCTLWLERHRHPAGLKCPHCGSHDRRLFRAQ
                     GHFPAYRCRGCHGYDTLLTGTVFAKTRQPPATLVLLRRGMAKGEPTARLARELTLSRK
                     QLHPLRQRIQANVNETAPTVAMLGTACEADELYQNAGENKHAPSRPG"
BASE COUNT          256 a          360 c          399 g          284 t
ORIGIN      
        1 ggagcaccat tgaattcgat tcttgcttta tgaccttaca cctggccagg gacgaccaac
       61 aacaagagca aatcgttggc atgagaggcg atatcgtcaa ccaggaacgt ctgtttgctc
      121 gatctttggg gcagttcttc ttgaagcggt caaagtcttt gccgcttgcc gggcatgtga
      181 ttttggctca tgtgtagtca gtgtgcgctg acacgtgact gacgcacatc cgtcggatca
      241 gagagggtgt gacgcgtgtc acattgacga tggcttcata cgtggccacg taaagatgca
      301 gggatcgctt atgaacgccc cgaaaactcc gcagataggt tcggagcgct gcgccagccc
      361 cctcgcaggt attgccgtgg acctcgcggc ggccatcgcc gtcatcatcc cgcgcccatt
      421 cgtgcacacc atgccggaca gtggcaggag atggatggct cccccggtag ctctgccact
      481 cgtcggtata gagctgggtg ctgtgagtgg gaatgttctc cgtgatcagg gccgcgcagg
      541 tacgcctatc agcctggtcg ccaacccaga agcgctgctc acctgtgtcc cgcgagatga
      601 tactgataat gggtggacga tcattggcgt aggtcccgtg ccctctccgc tgattggccc
      661 gccgacgagg cggatcatcc gggtcgggat ggggcgtgct tgttttcccc cgcgttttgg
      721 tacaactcat cggcctcaca ggcggtgcct agcatagcaa cagtcggggc ggtctcgttc
      781 acgttggctt ggatgcgctg ccgcagggga tggagctgtt tgcgtgacag cgtcaactcg
      841 cgtgccaagc gggccgtggg ctcacccttc gccatcccgc gccgcaacag gaccagggtc
      901 gctggaggct gacgggtctt cgcgaagacg gtaccggtta atagggtgtc atagccatgg
      961 cagccccgac accggtaggc cggaaagtga ccctgtgcac ggaacagccg ccgatcgtgg
     1021 ctcccgcagt gcgggcattt caagccggcg gggtggcggt ggcgttccag ccagagggtg
     1081 cagctggcat cgtccagcca gtcggttatt gggaaatcga tcataccctg atattcccac
     1141 atgttgcacg gtggctacac atgagccaaa aagcgaatcc tatgaagtgg gaatcgagca
     1201 gagcttctgg caggaacggc ttagattcga agtcacagta tttcgtttga tatttgatga
     1261 cttgatcatt ttcgactttc tgacgaacat cccacagaa
//
LOCUS       DASQSL010001071         3071 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_196355, whole genome shotgun sequence.
ACCESSION   DASQSL010001071 DASQSL010000000
VERSION     DASQSL010001071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3071
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196355"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..585
                     /locus_tag="VE844_11095"
     CDS             <1..585
                     /locus_tag="VE844_11095"
                     /inference="COORDINATES: protein motif:HMM:NF023592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau C-terminal
                     domain-containing protein"
                     /protein_id="HZC01873.1"
                     /translation="IALIGRRDLPLVPDPRRGLEMILLRMLAFYRETMPVADTLGEKT
                     SLPPVIPWSDQVKKTPPTIQAQEAPQVWRKMIEQLPLSGLARELALNCVLKSQDGNRC
                     RLLLPPSAQHLWSEKLESRLEQILRIHYGNDLQITITVADLDGQVTPLEEAQLREQQE
                     RQAAAHKAIGQDPNVKALCEAFSAQVTAIRPGGP"
     gene            674..997
                     /locus_tag="VE844_11100"
     CDS             674..997
                     /locus_tag="VE844_11100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011785097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HZC01874.1"
                     /translation="MKGAIGNLMKQAQQLQADLKKAQEELATLEVTGEAGAGMVKVQM
                     TGRHDIKRVTIDPSLLQEDKEMLEDLLAAAVNDANRRVEEATKDKLSGMTMGMGLPPG
                     FQLPL"
     gene            1023..1619
                     /gene="recR"
                     /locus_tag="VE844_11105"
     CDS             1023..1619
                     /gene="recR"
                     /locus_tag="VE844_11105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007081775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HZC01875.1"
                     /translation="MNYSPLIDRLIEALRCLPGVGPKSAQRIAFHLLERNRAGARRLA
                     AALKEAVETVRNCERCRNFSDAPLCRVCASAKRDASLLCVVESPTDIGLIEQAGGYSG
                     RYFVLMGRLSPLDGIGPDDLGMEKLTDLLNTGEVTEVILATSTTVEGQATAHYLTELI
                     QGRGIRVSRLAQGIPLGGELEFVDSGTLAHAISSRRQQ"
     gene            complement(1642..2892)
                     /locus_tag="VE844_11110"
     CDS             complement(1642..2892)
                     /locus_tag="VE844_11110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013221594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HZC01876.1"
                     /translation="MNLFTFLFVAVVLAQIMVEWWLSQRHIMHIQAHRQAVPEAFSKT
                     IPLSAHQRAADYTVICTRLRQYELLFGTLLLFLWTLGGGLDLLDTFWRGLELPPLGAG
                     TAFMLSVFIAMALLDIPLSAYRTFVIEQRFGFNRTTPRMFFMDLLKQGLLLLVLGTPL
                     ISLVLWLMDSTGPLWWVYVWVAWSGFSILMMWIYPTFIAPLFNKFDPLRDESLRHRIE
                     ALLGRNGFSNKGIFVMDGSLRSTHGNAYFTGFGAAKHIVFFDTLLAGFDAEEIESVLA
                     HELGHFKRKHILKQMVLMAGLSFVGFAVLGWLIDRLWFYQGLGVSTPSTHMALVLFLM
                     VAPVFSFLLQPVLAAISRKYEFEADDFAAEQADGRSLIRALVKLYKDNASTLTPDPWY
                     SAFHDSHPPAPLRVAHLAAKGGTR"
     gene            2966..>3071
                     /locus_tag="VE844_11115"
     CDS             2966..>3071
                     /locus_tag="VE844_11115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010845276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004527 - exonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease domain-containing protein"
                     /protein_id="HZC01877.1"
                     /translation="MMQSANNLIWIDLEMTGLDTTRDYIIEIATVITDN"
BASE COUNT          769 a          804 c          875 g          623 t
ORIGIN      
        1 atcgcattga ttggccgccg agatctaccg ctggtcccgg atccccgccg gggattggag
       61 atgatcctgc tgcgtatgct ggccttctac cgagagacca tgcctgttgc cgacaccctc
      121 ggcgagaaaa cctccctccc cccggtcatt ccctggtccg accaggtgaa gaaaacaccc
      181 cctacgatcc aggctcagga agcccctcaa gtatggcgca agatgatcga gcagttaccg
      241 ctctctggtc tagcgcgaga attagctctt aactgcgtac tcaaaagcca ggacggcaac
      301 cgttgccgct tgcttttacc gccctcggcg caacatctgt ggagcgaaaa gcttgaatcg
      361 cgcctggagc agatactccg tattcactac ggcaatgatc tacagatcac catcacggtg
      421 gccgacctag atgggcaggt aaccccttta gaagaagcgc aattgcgcga acagcaagaa
      481 cgacaggcag cggcgcacaa ggccattgga caagatccaa acgtcaaggc gttgtgtgag
      541 gcatttagcg cccaagtcac ggctattagg ccggggggtc cgtgaccgcg cttcgtcaac
      601 ggacgggcca gattataaaa ctcaccttat tgcggtatag tcttgtatag aagggtatga
      661 ggaggttatt tcaatgaaag gtgcgatcgg taatctaatg aaacaggcac agcaacttca
      721 ggccgatctc aaaaaggcgc aggaggagct tgcgaccctg gaggtgactg gagaggcagg
      781 tgccggtatg gtcaaggtgc agatgacagg acgacatgat atcaagcgcg taactatcga
      841 tccgagcctg ttgcaggaag ataaggagat gttggaggat ctgctcgcgg cggctgtaaa
      901 tgacgccaac cggcgggtag aagaggccac caaggataaa ttatccggca tgactatggg
      961 catgggtttg ccgccaggct ttcagttacc tttgtagttc ttgtcactcg cgtaaaccgt
     1021 tgttgaatta tagtccgctc attgatcgct tgattgaggc attacgttgc cttccagggg
     1081 ttggacccaa gtcggcgcaa cgcatcgcgt ttcatttgct cgagcgcaat cgagcgggcg
     1141 cccggcgact cgctgctgcg cttaaggagg cggttgaaac ggtgcggaat tgcgagcgct
     1201 gccgcaactt cagcgatgcg cctctctgcc gggtatgtgc cagcgctaaa cgcgatgcgt
     1261 cgctgctctg tgtggtcgaa agccccaccg atataggttt aatcgaacag gcagggggct
     1321 atagcggccg gtattttgtg cttatgggac ggttgtctcc gctcgatggc attgggccgg
     1381 acgatcttgg gatggagaaa ttaacggatc tgctcaatac cggggaggtt acggaagtca
     1441 tcttggccac gagcactacc gtagaaggcc aggccacagc gcattacctc accgagctga
     1501 ttcaggggcg cgggatccgg gtgagccggc tggcccaagg gatcccgtta ggcggcgaat
     1561 tggaattcgt cgacagcggg accctggccc atgctatttc cagtcgccgc cagcagtaac
     1621 gatctctgca cgccacccgt cctaccgggt cccccctttg gcggccaaat gcgccacccg
     1681 caagggggcc gggggatgcg aatcatggaa ggccgagtac cagggatcgg gtgtcagggt
     1741 gctggcattg tccttataaa gtttgaccag ggcccggatc aaggatcgtc catcggcctg
     1801 ctcggcggcg aaatcgtctg cctcaaactc gtatttgcgc gagatcgccg cgagcaccgg
     1861 ttgcaataag aagctgaaca ccggtgccac catcaaaaac agtaccagcg ccatatgggt
     1921 agaaggcgta cttaccccca gtccctgata gaaccatagg cgatcgatga gccatccgag
     1981 cacggcgaat cccacaaagc tcaagcctgc catcaggacc atctgcttta ggatatgctt
     2041 gcgtttgaaa tgaccaagct cgtgggccaa taccgattcg atctcctctg catcgaaacc
     2101 cgctaaaagc gtgtcaaaga aaacgatgtg cttagcggct ccaaaaccgg tgaagtaagc
     2161 attcccatgg gtagatcgca aggatccgtc catgacgaag atgcctttat tggaaaaacc
     2221 gttccgcccg agtaaggcct cgatgcgatg gcgcagcgat tcatcgcgca gcgggtcgaa
     2281 tttgttgaaa agtggggcaa taaaggtggg gtagatccac atcatgagga tgctaaagcc
     2341 agaccaggcg acccatacat acacccacca aagtgggccg gtactgtcca taagccacag
     2401 cactaaactg ataagcgggg tgccgagcac gagtaacagc aatccttgtt ttaacagatc
     2461 cataaaaaac atcctggggg tggtacgatt gaaaccgaag cgctgttcga ttacaaaggt
     2521 gcggtaggca gataggggta tatcgagcag cgccatcgct atgaacaccg agagcatgaa
     2581 ggcggtaccg gccccaagcg gtggaagttc gagtcctcgc cagaaggtat cgagaagatc
     2641 cagtccaccg cctaaggtcc agagaaatag taaaagcgta ccgaatagca gttcgtactg
     2701 cctcaagcgc gtacagatca cggtataatc cgcagcccgc tgatgagccg agagaggaat
     2761 ggttttgcta aaggcttcag gcaccgcctg gcgatgagcc tgtatatgca tgatgtgacg
     2821 ctgagacagc caccactcta ccatgatctg ggccagaacc acagcaacaa aaaggaatgt
     2881 gaagagattc atagtgcgtg ctacgccttt acttgtatgg aaccgttgtt aacctatatg
     2941 ccaaacaaaa tgggtgtaat gaaagatgat gcaatcggcc aataatctta tctggatcga
     3001 tctggagatg accggtctgg atacgacacg tgattatatc attgagatcg ctacggtgat
     3061 taccgacaac c
//
LOCUS       DASQSL010001072         2548 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_22783, whole genome shotgun sequence.
ACCESSION   DASQSL010001072 DASQSL010000000
VERSION     DASQSL010001072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2548
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22783"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            47..469
                     /locus_tag="VE844_11120"
     CDS             47..469
                     /locus_tag="VE844_11120"
                     /inference="COORDINATES: protein motif:HMM:NF013842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 transposase-related protein"
                     /protein_id="HZC01878.1"
                     /translation="MRAYSIDIRERVIENLDQESMRKTAKRFRVSEYFVYRLKQRYKE
                     AGTLAPKPHGGGQGPMVDEGGGEFIRGVLVEAAELTLKELCKRYEGRFGCTVSESSMD
                     RALKRLKVTRKKRLATTQSKRASMSNKNVRPIVRNYRP"
     gene            complement(945..2162)
                     /locus_tag="VE844_11125"
     CDS             complement(945..2162)
                     /locus_tag="VE844_11125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011803789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZC01879.1"
                     /translation="MDIQPIFRCAVGMDIHLAIIHVCVILQEPGCEPVVYRRQFGAFQ
                     RDRRAMAEWIAGFAPDTVVMESTGIYWKSPYAALERVGIRALVVNAQHVKKVPGRKTD
                     INDAEWLAMLARAGLLRGSFIPPEPLRDLRQVSRYHHRTTAMLAAEKNRLVRLLSDAG
                     IRLTAVVSDAHGMAARTMIDCLLDGGTPEQALRYAGRLKAPREELLASLQGNLSEEHL
                     FVARLIRQHIDTLQTQLADLERRLFDDLKPYEAAVQLLLTLPGIDRLAAAKLLVEIGV
                     DMAAFGTADRLSKWAGLCPGNHESAGKRKRGKTAPGNRYARTVLCEIAWAAIRTPSQF
                     KSHFQGLVIRRGTKRAIIASAHKVLKTVFVLLSRQVPYRDSTVDYQALVVKRNAPRWI
                     RQLKKFGYLPKAA"
BASE COUNT          538 a          676 c          847 g          487 t
ORIGIN      
        1 ttgaagagcg gacaagatac tagaatttga gaaggggtta gagtccatga gagcctactc
       61 gatagatata cgggagcggg tcatagagaa tctggaccag gaatcgatga ggaagacggc
      121 gaagcgattt cgggtttcgg agtactttgt ctaccggctc aagcagcggt ataaagaagc
      181 gggcacactg gctcccaagc cacatggagg agggcagggc ccgatggtgg atgagggggg
      241 tggggaattc atccgtggag tgctggtcga ggcggcggag ttaacgctca aggagttatg
      301 taagcgctat gaggggagat tcgggtgcac ggtcagcgaa tcctcgatgg accgagcgct
      361 gaaacggtta aaggtgaccc gaaaaaaaag acttgctacg acccaaagca aaagagcgag
      421 catgtccaac aagaacgtgc ggcctatcgt gaggaattac cgaccttaaa ggcggaggag
      481 gccatcgctc tggatgagat gggggcggct accaatctcg cgcccctgta tgggcgttcg
      541 ctgcggggag agcgggtgta gggggccaag cccacggcgc cggggaagcg catcagcacg
      601 gtcggtgctg ttcacggctc agcggcttaa agaccgcgat gtgctttgag ggcaccctga
      661 ccggggcggt gtttttgcag ttcctggacg agtttctggt gccggtgctc aagcccggcc
      721 aaatcgtgat tctggataat gccaaggccc acaaggtggc cggcgtgcgt gaacggattg
      781 aaggagcggg ggcgcgcgtg ctttatctgc ccccgtattc gccggatttg aatcccctcg
      841 aaatggcttg gtccaaggtt gccgtgaaag tatgggcctg tgagaacaat aagatgccgg
      901 cgtcggatga gcgacgttgt tgtgagacga ccgacgagac gaagttaggc tgccttgggc
      961 aggtagccga attttttcag ttgcctgatc cagcgcggtg cattgcgttt gaccacgagg
     1021 gcctggtagt cgacggtgga atctcgatag ggaacctggc gcgacagcag cacgaatacc
     1081 gtcttgagca ctttatgggc gctggcgatg atcgcccgtt tggtcccccg acgaatgacc
     1141 aaaccttgga agtggctctt gaattgagag ggggttcgga tggccgccca ggcgatctcg
     1201 cacagtacgg tgcgggcata gcgattgccc ggtgcggttt tgccgcgttt gcgcttgccg
     1261 gccgattcgt gattgcccgg acagaggccg gcccacttgg agagtcggtc ggcggtaccg
     1321 aaagcggcca tgtcgacacc gatttccacc aggagcttgg cggccgccaa gcgatcgata
     1381 ccgggaaggg tcaacagcag ttgcacggcc gcctcatagg gtttgagatc atcgaatagt
     1441 cggcgttcga ggtcggccag ttgggtttgc agggtatcga tgtgctggcg gatcaggcgg
     1501 gcgacgaaca ggtgttcctc actgaggttc ccctggaggg aggccagcaa ctcctcccgg
     1561 ggggccttca ggcgtccggc gtaccgcagt gcctgttctg gcgtgccgcc atcgagcagg
     1621 cagtcgatca tcgtgcgggc cgccatccca tgggcgtcgg agacgaccgc cgtgaggcgg
     1681 atgccggcat cgctcaagag gcgcaccaag cggtttttct ccgccgccaa catggccgtg
     1741 gttcggtggt ggtagcggct gacctggcgc aagtcacgca agggttctgg cgggatgaaa
     1801 ctgccgcgca gcaagccggc gcgtgccaac atcgccagcc attccgcgtc attgatatcg
     1861 gtcttgcggc cgggcacctt cttgacgtgc tgggcattga ccaccagtgc ccggatgccg
     1921 acccgctcca gagcggcata ggggcttttc cagtagatgc cggtgctctc catgaccacg
     1981 gtatcggggg caaagcccgc gatccactcg gccatggcgc gtcggtcacg ctggaaggcg
     2041 ccgaactgcc gccgataaac caccggttcg cagcccggct cctggagaat cacacagacg
     2101 tggataatag ccagatggat gtccatccca acggcacagc gaaagatcgg ttgaatgtcc
     2161 atagggacct cccctaaaaa aagtggaaac gaaatgatgc ctgaggaggt tcaccagggc
     2221 cccgatggca cctgaccatc cggtgtcagc tcccacggga gccggtccgt gagggtcggt
     2281 taagttgccg tacgcgctca aaggcagcag tcgggggtac aagtcggggc cccagggtca
     2341 tgttaagcaa cggagtcgaa ctaccattct tacagcgacc ttgggtgata cctctcttgg
     2401 cgtaaggtac tttcatccat aggggtgtca atgcccaatg aaatgactgt taagcagttc
     2461 ctgcgcaaag cccaagcgcg cactgtggag gcactttatg aggcgatcgc tcaggcccta
     2521 caaactctct ctccaacaga tgccaaag
//
LOCUS       DASQSL010001073         1634 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_168658, whole genome shotgun sequence.
ACCESSION   DASQSL010001073 DASQSL010000000
VERSION     DASQSL010001073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1634
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168658"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(179..403)
                     /locus_tag="VE844_11130"
     CDS             complement(179..403)
                     /locus_tag="VE844_11130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01880.1"
                     /translation="MKLSARTDQLPPRRYEAARVELHCPETAAHGRSLILEHATIYAD
                     GWACWAEDGHVIVGYIQAGRCCNPPQVGTL"
     gene            complement(559..801)
                     /locus_tag="VE844_11135"
     CDS             complement(559..801)
                     /locus_tag="VE844_11135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01881.1"
                     /translation="MAKKSRPTFQKRQKEQARQQKQQAKAARRLQAKQRRANGVSESS
                     ETALGTDGIQFAPQVLPATRDGVSAEEDPLSGPDPS"
     gene            complement(952..>1634)
                     /locus_tag="VE844_11140"
     CDS             complement(952..>1634)
                     /locus_tag="VE844_11140"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HZC01882.1"
                     /translation="PNHLEWDPDVRLRFLVFSEEQSDRVRGWRRFIVKHQALLFIPML
                     LLQGIAIRVHSVRFLLCRRARFSILESLFMVAHGFFYLGIVFSLLGAWKGMSFILVHQ
                     MLFGLYMGSVFAPNHKGMLVLKGTGTLDRLRRQVLTARNVRGHPLTDFWFGGLNYQIE
                     HHLFPQMARNKLKEAQATVRAFCQARSIPYRETSVVQSYRETLRYFHHVSAPLRHVDK
                     AHPLPNGG"
BASE COUNT          318 a          496 c          459 g          361 t
ORIGIN      
        1 cttcccgtaa gggcataccg cacgcgaggc gtacctaccg aaagcggcgg tgataagcca
       61 ttactggtct gccgtgacgg gcgttcacgt gacgcggcga tcggccctta tcatgacaga
      121 tcccgtccag ggacggcgcc ctccgagtct gcgcgcccct cctccgtata gtctccttct
      181 acaaggtacc gacttgcggt gggttgcagc aacggccggc ctggatatag ccgacgatca
      241 catggccatc ctcggcccaa cacgcccacc catctgcgta gatcgtggcg tgctccagga
      301 tcagagacct tccatgagct gcggtctctg ggcaatgcag ctcaactcgt gccgcctcat
      361 agcggcgtgg tggcagctgg tccgtgcgtg cagacagctt catgtttatg cctcccagta
      421 aatcgtcttc cgggttcggc gtcttatgcc tccggctcag catcttgagg ccgttctttt
      481 catgcgtcga cggaggcgaa gaccccggga aggcgatgag cttatgttga ggtaatcatc
      541 catcccgttc acgcccattc acgatgggtc cggtcctgac agggggtctt cctcagcact
      601 gaccccatcc ctggtcgctg gtaacacttg aggggcaaat tgtatgccgt cggtacctag
      661 ggcagtctca ctactctccg acacgccgtt ggcccggcgc tgtttcgctt gcagccgccg
      721 agcggctttt gcttgctgtt tctgctgccg cgcttgttct ttttgccgtt tctgaaaggt
      781 cggtcgagat tttttcgcca tatgttgctc ctccaacgct tgcaggtacc tgaggccggg
      841 gtacttgggt ctacgcattg accactcgcc agctgcgaga tggcgtaggg gattgtctcc
      901 cgcgctcgca ccaagtcacg tactgttact gaccattccc cagttcgagt tctacccccc
      961 attcggcagg gggtgtgcct tgtccacgtg tcgcagcggc gcgctgacgt ggtggaaata
     1021 ccgcaaagtt tctcgatagg actggacaac gctggtctcg cggtatggga tcgatcgcgc
     1081 ctggcagaac gcgcgcaccg tcgcttgtgc ctctttgagc ttgttcctgg ccatttgggg
     1141 gaagaggtga tgctcaattt gatagttcag gccgccaaac cagaagtctg tcaacggatg
     1201 ccccctgaca tttctggccg tgaggacttg ccgtcgcagt cgatcaagcg tgccggtgcc
     1261 cttcagcacg agcatccctt tatgattggg cgcaaagacg gagcccatat acaacccgaa
     1321 cagcatctgg tgcaccagga tgaaggacat ccccttccac gcgccgagga gcgagaacac
     1381 aatgcccagg tagaaaaagc cgtgggcgac cataaacagc gactcgagaa tgctaaatct
     1441 cgctcgccta cacagcagaa acctgacact atggacgcgt atggcgatgc cttgcagcaa
     1501 gagcatcgga ataaacaaca gggcctggtg cttcacgata aagcggcgcc atcccctcac
     1561 acggtcgctc tgttcctctg agaaaaccag gaaccggagt ctcacatcag gatcccactc
     1621 aaggtggtta ggat
//
LOCUS       DASQSL010001074         4540 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_145499, whole genome shotgun sequence.
ACCESSION   DASQSL010001074 DASQSL010000000
VERSION     DASQSL010001074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4540
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145499"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..263
                     /locus_tag="VE844_11145"
     CDS             <1..263
                     /locus_tag="VE844_11145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019642686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HZC01883.1"
                     /translation="EPLSGIISVVKTALEQTPPELAGDVCERGLVLTGGGALLRDVDR
                     LLMEEVGISAIVAEDPMTCVARGGGRVLELLDEHSPETLSLE"
     gene            330..1202
                     /gene="mreC"
                     /locus_tag="VE844_11150"
     CDS             330..1202
                     /gene="mreC"
                     /locus_tag="VE844_11150"
                     /inference="COORDINATES: protein motif:HMM:TIGR00219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HZC01884.1"
                     /translation="MSPLFLKGPSLSSRLWVLLLVSIALMSFDHNQQGRLEGLRSVLS
                     VVVYPLQSLINLPVDTAQWLRKSLVTHKVLMEENARLRRENLLLRLRTQKFAALESET
                     RRLRELLEVSTEVGEQALLATVLTAGLEPSTRQIILNKGSQQGVYLGQPIVDAHGIMG
                     QVVHVGPFSSTGMLITDVNHAIPVRINRNGLRAVATGTGVGNTLALSYVPLSADVQKG
                     DLIVSSGMDGHFPPGYPVGQVTRVEIDAGEPFAKISAAPISRLNRAYEALLVWPPYKP
                     VEARQFSSATMVSR"
     gene            1199..1687
                     /gene="mreD"
                     /locus_tag="VE844_11155"
     CDS             1199..1687
                     /gene="mreD"
                     /locus_tag="VE844_11155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006787927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HZC01885.1"
                     /translation="MTHISGQEAGIIAVSFLIALLLTAIPLPEWAIAWRPAWLTMVLI
                     YWCMVSPKRVSVGTGWLLGFLLDVLKGSLLGQHAAGFALVAFITVKAHRRIRVFPLVQ
                     QALFVGSMIALNGLLTLWIQTVIGLPPQYTSFWLPVLTSMPLWPWLYIILSDLRLKAQ
                     AS"
     gene            1845..3695
                     /gene="mrdA"
                     /locus_tag="VE844_11160"
     CDS             1845..3695
                     /gene="mrdA"
                     /locus_tag="VE844_11160"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020505726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HZC01886.1"
                     /translation="MKDREGETRIVRERVLASIVIMGLLMLIVVVRLAKLQILDHDHY
                     TTLSQDNRVKILPLAPTRGLIFSHDGRLLADNRPSFSLEVIPERVADLRKTLEELSQI
                     VSISEEDSKRFFQEVKRRRRFDNVPLRFNLSEEEVARFSVNRYRFPGFDIVARHMRFY
                     PLGEQMAHVVGYVGRINEAELKSIDTANYSGTNHIGKTGVERSYEAVLHGRVGYQQVE
                     ANAQGRIVRVLKRRPPIAGKNLHLTIDTSLQSLAIEALGERRGAVVALDTQTGGVLAL
                     VSKPSFDPNLFVNGIGAADYTRLRDAPERPLFNRALQGKYPPGSTIKPMFGLATLEQG
                     LPKTGKVTWCPGGYRIPGQAHTYRCWNKRGHGRVDLKRAIAQSCDVYFYHLAYTLGID
                     RVHQHLSRFGFGQLTGIDLPGESAGLLPSSEWKRKIRHAAWYAGETVITGIGQGYFLA
                     TPLQLTHAVAMMANRGSTVRPTVIHRTDDPGSSAQANEAAKPEFPKIMTRPEHWDTLI
                     EAMIEVVRSGTASRAGQGATYPFAGKTGTAQVFGIKDQAEHKKKKIPEHLQDHAWFIA
                     FAPADHPRIAITVLVENGGHGSQAAAPIARKLFDHFLLGGTPQVSRHDQH"
     gene            3682..>4540
                     /locus_tag="VE844_11165"
     CDS             3682..>4540
                     /locus_tag="VE844_11165"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: protein motif:HMM:NF013279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008955 - peptidoglycan
                     glycosyltransferase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HZC01887.1"
                     /translation="MISTSPRRLLYRFHIDPALLGGCLLLCAIGFVTISSAVELDPNM
                     LLRQGIRLLIGLCVMIALAQIPPSQLAQWAPWLYGMGLMLLVGVMIAGTGEGAQRWLK
                     LGPLQFQPSEFMKLFVPMVLAWYLQDKPLPPKLRYLFVAALLIAVPVFLVVKQPDLGT
                     ALLIAAAGGAVLFLAGLSLKLLILVTLGLAGAAPLLWPLLHDYQRQRLITLLDPGQDP
                     LGKGYHIIQSKIAVGSGGLYGKGWLHGTQSHLEFLPEHSTDFIFAVFCEEFGFIGVLV
                     LFGIYVFVIF"
BASE COUNT          930 a         1263 c         1270 g         1077 t
ORIGIN      
        1 aggagcccct gtctggtatt ataagtgtgg tcaagacggc actcgaacag acgccgcctg
       61 agctagcggg cgacgtatgt gaacgaggcc tggtattgac cgggggcggg gccttgctaa
      121 gggatgttga ccggctgttg atggaagagg tggggatatc ggccattgtg gccgaggatc
      181 ccatgacctg tgtagcacgc ggtggaggac gggtgctgga gctgctcgat gaacacagcc
      241 cagaaacact gtcgctggaa taataattta gttcttagaa agttgtaatc tacacttaaa
      301 gtattacttt aactttagag gagtctccca ttagccccct atttttaaaa ggcccatcgc
      361 taagctcgcg gttatgggtg ttattattag tatcaatagc gctgatgagc ttcgatcata
      421 accagcaggg acgccttgaa ggcttgcgat cggtcctatc ggtggtggtt tatccgctcc
      481 agtcgctgat taatttgccg gtggataccg cccaatggct cagaaagtcg ctagtgaccc
      541 acaaggtgct gatggaagaa aatgcccgcc tgcgccgaga gaacctcctg ttgagattac
      601 gcacccaaaa attcgccgcc ctggagtccg aaactcggcg gttgcgggag ttactggagg
      661 tctccaccga ggtcggggaa caggccttgt tggccaccgt gctgaccgca ggactcgagc
      721 cctctactcg ccagatcatc ttgaataaag gcagtcagca aggcgtttat ctggggcagc
      781 cgattgtcga tgcgcacggt atcatggggc aggtggttca tgtaggaccc ttctccagca
      841 cggggatgct cattactgac gtaaatcatg ccatcccggt gcggatcaat cgcaatggcc
      901 tgcgcgcggt ggctacgggc accggcgttg gaaatacgct tgccctaagc tatgtccctc
      961 tgagcgccga tgtgcaaaag ggtgatctga tcgtctcctc agggatggat ggacatttcc
     1021 cacccggtta tcccgtgggc caagtgaccc gtgttgagat agatgccggc gagccgtttg
     1081 ccaagatcag cgcagctcct atatcgaggc ttaaccgcgc ctatgaagcg ctgttggtat
     1141 ggccgcccta taaacctgtg gaggcgaggc aattttcatc agctacgatg gtatcccgat
     1201 gacacacata agcgggcagg aagcggggat cattgccgta agcttcctca tcgctttact
     1261 tctcaccgct ataccccttc ccgagtgggc cattgcatgg cggccggcct ggcttaccat
     1321 ggttctgatc tattggtgca tggtctcacc taaacgggtg agtgtgggga ccggctggtt
     1381 gctgggattc ctgctcgatg tgctcaaggg cagcctgctt ggccagcatg ccgccggttt
     1441 tgcgcttgtg gcctttatca ctgttaaggc acatcggcgt atccgggtct ttccactggt
     1501 ccaacaagcc ctctttgtcg gatcgatgat cgcattgaat ggtcttttaa ccctttggat
     1561 ccagaccgtg atcggtttgc caccgcagta tacctccttc tggttacccg tgttgaccag
     1621 catgcccctt tggccctggc tttatattat tttgagcgat ctccgtctta aagcccaggc
     1681 aagctagggc aataagcctg ttcttgcccc ccgcttgtga tagacttctc gccaagaagt
     1741 tattccctcc ccttcgatgg gttatgaact ttttgatcgc ctctcgccca gttaaaggcc
     1801 ataaaatcaa acacaccctt cagggtgtgc catttcctct ggttttgaaa gatagagaag
     1861 gagagacccg gatcgttaga gaacgggtcc tggcctccat agttatcatg ggactattga
     1921 tgctgatcgt ggtcgtgcgc cttgcgaagc ttcagatcct cgatcacgat cactacacca
     1981 ccctgtccca ggataaccga gtcaagattt tgcctttggc ccctacccgc ggtttgatct
     2041 tcagccatga tggcaggctg ctcgccgaca atcggccctc gttcagtctc gaggtgatcc
     2101 cagagcgcgt ggccgatctg cgcaagaccc tcgaggaact ttcgcagatc gtttccatca
     2161 gtgaagagga tagcaagcgt tttttccagg aagtaaagag aagacgccgc tttgacaacg
     2221 ttcccttacg gtttaacttg agcgaggagg aagtagcgcg tttctctgtc aaccgttatc
     2281 gcttccccgg tttcgatatt gtagcgcgcc acatgcgctt ttatccttta ggagagcaga
     2341 tggcgcatgt ggtcgggtat gtcgggcgga tcaatgaggc ggagcttaaa tccatcgata
     2401 ccgccaatta cagcggcacc aatcacatcg gcaagaccgg ggtagaaagg tcttatgaag
     2461 ctgtgctcca tgggcgggta ggctaccagc aggtggaggc caatgcccag ggcaggatcg
     2521 tgcgtgtgct taagcgccgc cccccgatag ctgggaaaaa cctccatctc accatcgata
     2581 cctcgttaca gtccttggcg atagaggcct tgggagagcg ccgaggcgcg gtcgtagcac
     2641 ttgacactca gacaggcggg gtgctggccc tggtgagtaa acccagcttt gaccccaatc
     2701 tatttgttaa cggcataggc gcagccgatt acaccagact ccgggatgcg ccggagcggc
     2761 cgctgttcaa ccgcgccctg cagggtaagt acccgccagg gtcaaccatt aagcctatgt
     2821 tcggcttggc taccctggaa caaggtctgc cgaaaaccgg caaggtgacc tggtgtccgg
     2881 gaggatatag gatcccagga caagcccata cctatcgctg ttggaacaag cggggacatg
     2941 gccgggtgga tttaaaacgg gccattgccc agtcctgcga cgtctatttt tatcatctgg
     3001 cctacaccct ggggatcgat cgcgtacacc aacacctaag ccgctttggc ttcggtcagc
     3061 ttacggggat cgatctgccg ggtgaatcgg cagggcttct gccttcctcc gaatggaagc
     3121 gtaagataag gcatgccgct tggtacgccg gtgagacggt gatcaccggg atcggacagg
     3181 gttatttcct ggcgacaccg ctgcaactca cccatgcggt ggcgatgatg gccaatcgtg
     3241 gcagcaccgt tcggcccacg gtcatccacc gtaccgatga tcctggctcc tcagcgcagg
     3301 ctaatgaggc tgctaaacct gaatttccca agatcatgac gcgaccggaa cattgggaca
     3361 cccttatcga ggcgatgatc gaggtagtgc gtagcggcac cgcaagccgt gccggccaag
     3421 gggccaccta cccgttcgcc ggcaagaccg gcacagccca ggtctttggg ataaaggacc
     3481 aagcagaaca taaaaaaaag aagatccctg aacatctaca ggatcatgcc tggtttatcg
     3541 cctttgcccc cgccgatcac ccccgtattg ccatcaccgt gctggtcgag aacggcggtc
     3601 atggcagtca ggccgcggcc cccatcgcgc gtaaattgtt cgaccatttt ctactgggag
     3661 gaaccccgca ggtatccagg catgatcagc actagcccac ggcgcctact ctaccgcttc
     3721 catatcgatc ccgccctctt gggcggctgt ttattgcttt gtgccattgg atttgtgacg
     3781 atctcgagcg ccgtcgagct ggatccaaac atgctcctgc gccaaggtat acgcctgctg
     3841 atcggtttgt gtgtaatgat cgcgcttgcc cagatcccgc cgtcacaatt ggcccagtgg
     3901 gccccctggc tttatggcat ggggctcatg ctgctcgtag gcgttatgat tgcaggtacc
     3961 ggtgaaggcg cccaacgctg gctcaagctc ggcccgcttc agtttcagcc ctccgaattc
     4021 atgaagctct tcgtgcctat ggtgctggcc tggtatcttc aggataagcc ccttccccca
     4081 aagctccgtt acctctttgt cgctgccctc ctcattgctg tgccggtatt tttggtagtt
     4141 aaacagcccg atctcggcac cgcactgctc attgcagcag cgggtggggc agtgcttttt
     4201 cttgccggcc taagcctcaa actcctcatc ttggtaacgc tgggtttggc aggggcggcg
     4261 ccacttttgt ggccgctttt gcatgattat cagcgccagc gcctcatcac cttgttagac
     4321 cccgggcagg atccgctggg gaagggctat cacatcatcc aatcgaagat cgccgtgggc
     4381 tcaggcggac tctatggcaa gggatggctc catggcaccc agtctcatct ggaattccta
     4441 ccggagcact cgaccgattt tattttcgcc gtattttgcg aagaattcgg gttcattggt
     4501 gtgctggtgc tgtttgggat ctacgtgttc gtgatcttca
//
LOCUS       DASQSL010001075         1443 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_145508, whole genome shotgun sequence.
ACCESSION   DASQSL010001075 DASQSL010000000
VERSION     DASQSL010001075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1443)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1443)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1443
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145508"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..845)
                     /locus_tag="VE844_11170"
     CDS             complement(<1..845)
                     /locus_tag="VE844_11170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01888.1"
                     /translation="MILSPGSRSNRLSKRAVCIAVDTVTVYHWDRRHGLTESFAFDAN
                     ETGLVHFSRYLRESPALPTYILVDIVEEEYRQETIPHLRGSDRQAVIKRKQARLFRGT
                     PYCYTSLQGREAGGRRDQHLLFTALVNPDLVTPWVHLCLQNKIPVAGIYSLAILSKSL
                     LPKLGATARNVLLVTLQSTSGLRQSYFRDQELKISRLARIPRLGTAPFGSYVLGELDK
                     LQRYLNSLGLMGPGVLTVYILSHGESLEALNRQCLDVENRRFYLLDMREVQALRDSRG
                     AGYSL"
     gene            complement(817..>1443)
                     /locus_tag="VE844_11175"
     CDS             complement(817..>1443)
                     /locus_tag="VE844_11175"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HZC01889.1"
                     /translation="VKAEGQELPWHTKALILASQGVADYGYLALLALGIGVALVFLNS
                     KRNPAFGLRIDALVLKIPVVGSLLKKMILTRFANYFALMYASGIAVLECLRIGEEIAG
                     NKAIQLAIREAGRQIAEGAGISAAFAATGLFPPLVVRMLRVGENTGSLESALLNVSYF
                     YNRDVKESVERLQAIIEPAMTTALGIIIAWIVFSILGPIYDLITRIKI"
BASE COUNT          343 a          380 c          396 g          324 t
ORIGIN      
        1 taaagggagt agccagcacc ccttgaatcc cgcagagcct ggacctccct catatctagc
       61 aggtaaaaac ggcggttctc gacatcaaga cactgccggt tcagcgcttc gagggattcg
      121 ccgtggctta ggatatagac ggtgaggaca cccggaccca tcagtcccag gctgtttaga
      181 taccgctgca gcttatcgag ttcccccaag acgtaagacc caaagggtgc tgttccaagg
      241 cgcggtatcc tcgccaagcg gctgatctta agttcttgat cgcggaagta agattgccga
      301 agaccgctgg tgctctgtaa ggttactaaa aggacattgc gggcagtggc tcctagtttg
      361 ggcagcagcg atttactgag aatagcgaga gaatagatac cggcaacggg gatcttgttt
      421 tgtaaacata agtggaccca gggtgttacc aggtcgggat tgacaagggc ggtaaataac
      481 aggtgctgat ctcgccgccc ccccgcctct cggccttgca gcgaggtata acaatacggc
      541 gttccccgaa ataagcgggc ttgtttgcgt ttgatcaccg cctgtcggtc tgatccacgg
      601 agatggggga tagtttcttg ccggtattct tcctcgacaa tgtccactaa tatatacgtg
      661 gggagagcgg gtgattcccg caggtaccgt gaaaaatgca ccagaccagt ctcgttggcg
      721 tcgaaggcaa aggattcggt gaggccgtgg cgacggtccc agtgatatac cgtcaccgta
      781 tcgacggcga tgcacaccgc ccgcttggag agtcgattag atcttgatcc gggtgataag
      841 atcatagatg gggcctagta tggagaacac gatccaggca atgatgatgc ctagggcggt
      901 ggtcatggcg ggttcaataa tggcttgcag ccgttcgacg gattccttca catcccggtt
      961 ataaaagtaa ctgacattga gtaaagcgct ctccagggaa ccggtattct cacctactct
     1021 gagcatacgg accactaaag gtggaaacag tccggtggcg gcaaaagccg cacttatccc
     1081 tgcgccctct gcgatttgtc ggcctgcttc acggatagcg agttgaatcg ccttattccc
     1141 ggcgatctcc tcaccgatcc gtagacactc gagcaccgcg atccctgagg catacatgag
     1201 ggcaaaatag ttggcaaagc gggtgaggat catctttttt aataaggatc ccactaccgg
     1261 gatcttcagt accagggcgt cgattctcaa tccaaaagcg ggatttctct tgctgtttaa
     1321 gaatactaag gctactccta tccccagcgc caataaggca aggtacccgt agtccgcgac
     1381 cccctgcgag gccaggatta aagccttcgt atgccaaggc aattcctgtc cctccgcttt
     1441 gac
//
LOCUS       DASQSL010001076         1231 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_129448, whole genome shotgun sequence.
ACCESSION   DASQSL010001076 DASQSL010000000
VERSION     DASQSL010001076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1231
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129448"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            158..460
                     /locus_tag="VE844_11180"
     CDS             158..460
                     /locus_tag="VE844_11180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01890.1"
                     /translation="MIRVDELADGIYRISTMDPGFSITVNQFLIDDERPTLIHTGMFP
                     MYEDVRRAVAEVLDPARLAYVVCPHFEADECGGMGRFVAEAPAAVLACSEAGRYST"
     gene            484..888
                     /locus_tag="VE844_11185"
     CDS             484..888
                     /locus_tag="VE844_11185"
                     /inference="COORDINATES: protein motif:HMM:NF039346.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01891.1"
                     /translation="MQGFRDGEVIDLGERKLRFIETPHVHHWDSMMVFEETTGSLFPA
                     DLYIQPGDQPPVVREDLGEEMCYLYREVGIFAAEEPVRRVVNRIEKLDPQWVHPMHGG
                     SLPKEVLPSYTRALQNEAFAFEGKVFGRMIPE"
BASE COUNT          275 a          299 c          385 g          272 t
ORIGIN      
        1 ttaccagaga gatcggcaaa caaaagaaga gagctagaca cataactggt caatgggcgt
       61 ggcggcagcg gaaggtgttg cggggcacca ttacctttga gacaatcgtt gcggaatagt
      121 aacctgctgg gggttgcgcg ggaaggagta gacgctaatg atacgggttg acgagttagc
      181 cgacgggatc taccggatca gtactatgga tccagggttt tccataactg ttaaccagtt
      241 cctcatcgat gatgagcgtc ctacgctgat ccacactggc atgtttccga tgtacgagga
      301 cgttcgcagg gccgtggccg aggtcctcga tccggcgcgc ctggcctacg tcgtttgccc
      361 gcacttcgag gcggacgagt gtggtggcat gggacgcttc gtcgcagaag cacccgcagc
      421 ggtgctggcg tgtagcgaag cggggcgcta ctcaacctga cacagtggga ctactcgggt
      481 cctgtgcagg ggtttcggga cggcgaagtt atagacctag gagagcgcaa gctgcgtttt
      541 atagaaacgc ctcacgtcca ccactgggac tcgatgatgg tcttcgagga aactacgggc
      601 agcctctttc ctgcggatct ctacatacag ccgggggacc aacctcctgt cgtacgagaa
      661 gatctgggcg aagagatgtg ctacctatac cgcgaggttg gcatcttcgc ggcggaagag
      721 cccgtgcgca gggtcgtgaa ccggatcgag aagctggacc cgcagtgggt ccacccaatg
      781 cacggtggaa gcttgcccaa agaggtgctg ccgagctata cgcgtgcgct tcagaatgaa
      841 gcatttgcct tcgaaggaaa agtattcgga cggatgatac ccgaataacc gcttgcgcgt
      901 ggagcgctaa ggcttttaaa ggatacggcc ctttttcttg ctctgacttt tgtgcaagac
      961 gggttttggc gcgaatccgc ctgagaggct ttttgtgcac aagctctact ttttgtgcag
     1021 gagggacttt ttgtgcaaag ctctagttgc accaaaattg cccgtttaga gcgaattttg
     1081 gtgcaacgcc accgttagcc ttggagatgc gataaacgag caggagaggc aattgacatc
     1141 ctcagagcag ttacaatagg acaatgactc gtgggatgaa caggtcgagg ggacgagtag
     1201 tgtcgctgcc ttcggtcgtg ttcgctttgg c
//
LOCUS       DASQSL010001077         1192 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_61013, whole genome shotgun sequence.
ACCESSION   DASQSL010001077 DASQSL010000000
VERSION     DASQSL010001077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1192
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61013"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1084
                     /locus_tag="VE844_11190"
     CDS             <1..1084
                     /locus_tag="VE844_11190"
                     /inference="COORDINATES: protein motif:HMM:NF040081.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF6399 domain-containing protein"
                     /protein_id="HZC01892.1"
                     /translation="SYETWFERANERLSTFGAEVLSLVSDRAKARIKLAHKGFGCPSI
                     PDGFHVGRDLAKGYSLILFGRLRQAKRELEQVKQRLEQWHTTPQADPSQIAANQAQVA
                     ACAASVHHWQEVGSTWRPHLSNLSRIVHPWRLSDSKCQTSQEVEEPLQGELKAIETFL
                     ESHGLPVKKETLSKVQKQLGGISALIDCWWRTVRQDLAHLAMTPRWSHWAQEALLPMM
                     YWQEQLRRTRHPAQKAQIVIVLKALEEAFERHSCTRQLQAALLADWKGWAVDHAKAFQ
                     RASSAVEGRHGYLVQMQHNHRGLPTGRYSVWRALHNFDGRAKDGTTPASRFFRRSFPD
                     LFESVLSQIDELPMPRQRRQALATSH"
BASE COUNT          261 a          330 c          357 g          244 t
ORIGIN      
        1 cagttatgag acctggttcg agcgcgccaa tgagcgtctg agcacgtttg gcgcggaggt
       61 gttatccctg gtgagtgacc gcgccaaagc gcggatcaag ctggcccata aggggtttgg
      121 ctgtccgagt attccagatg gatttcatgt gggccgtgac ctggccaagg gctattcgct
      181 gatcctcttc ggtcgcctgc ggcaagccaa acgcgagttg gaacaagtca agcagcgcct
      241 ggagcaatgg cacacgaccc cccaggcaga ccctagccaa atcgctgcga accaggctca
      301 ggtagcggcc tgcgccgcct cggtccatca ctggcaagag gtggggagca cctggcgacc
      361 acacttgtcc aatttgtcgc gtatcgtaca cccctggcgg ctttcggact cgaaatgcca
      421 gacctcacag gaggttgaag agccgttgca aggcgaactt aaggccatcg aaacgtttct
      481 tgagagccac gggctgccgg tgaaaaaaga gaccttgagc aaggtgcaaa agcaacttgg
      541 cggcatctca gccctgatcg attgttggtg gcggacggtg cgccaagact tggcgcacct
      601 ggcgatgacg ccgaggtgga gccactgggc tcaagaggcg ttgctgccca tgatgtactg
      661 gcaagaacag cttcgtcgca cgcgccaccc ggcgcaaaag gctcagatcg tgatcgtgct
      721 taaagcgctt gaagaagcct ttgagcggca ttcatgcacc cgccagcttc aagcggcgtt
      781 gctggcggat tggaaagggt gggccgtgga tcatgccaag gcctttcaga gggcgtcatc
      841 ggccgtcgag ggacgccacg gttatctcgt gcagatgcag cataaccatc gcggcttacc
      901 tacgggtcgc tattcagtgt ggagggcgct gcataacttt gatggtcgag ccaaagacgg
      961 aacgacaccg gcgtcgcggt ttttcagacg gtcgtttccc gatttgtttg aaagcgtatt
     1021 gtcacagatt gatgagttgc ccatgcccag gcaacgccgt caggccctcg cgacaagtca
     1081 ttgagagaac agggtgtccc ggcttaaatc gataccccaa aatctcatca caatctaaat
     1141 cgagttgcac aaacttttcg cgcatttctg caatgacctg cgcttttgcc tc
//
LOCUS       DASQSL010001078         1800 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_158633, whole genome shotgun sequence.
ACCESSION   DASQSL010001078 DASQSL010000000
VERSION     DASQSL010001078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1800
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158633"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            193..933
                     /locus_tag="VE844_11195"
     CDS             193..933
                     /locus_tag="VE844_11195"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF017684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HZC01893.1"
                     /translation="MSAAQPPHWKPWTFDNVVDVNYPAFALRTYLEQADVRAYLRRIS
                     ASRRIESACEIGCGYGRITVALCEFASRVMGFERQPEFVEEARRLHPNIEVRQVSSLS
                     ELPETDNSFDVVLTFTVLQHLTDAAVVRAIAEIKRLVRPSGFVLLCEETDTSHVAGDL
                     TDEGGRCTIGRSISTYVQLLAPCRLIATSPRRIEPNYPGLDVGTYMLFQSPRANSSAI
                     KPAENLRRLLRLFTSARLRSGIKNLIWF"
BASE COUNT          387 a          520 c          527 g          366 t
ORIGIN      
        1 caaccccaag gggaatgctg accccgaacg ctggatgcgc atgctcaaag aagagcgcct
       61 ctggcttcag gaatggatct gtccctttgc cttgagctat aagacaccga ggtagtttga
      121 gcgggactac cgccgttgtc acagtcctcc aatcattgcc gcttaaccac tagggactaa
      181 gagaggatca ggatatccgc cgcgcaacca ccgcactgga agccatggac atttgataac
      241 gtcgtcgatg tcaactatcc cgctttcgct ctccgcacgt acctcgagca agcagatgtc
      301 cgcgcatatc tgcgccggat cagtgcaagc aggcgcatcg agagtgcgtg cgaaattggg
      361 tgcggctatg gtcggatcac cgtcgccctg tgtgagtttg cctcacgcgt catgggtttt
      421 gagaggcagc cggaatttgt tgaagaggcg cgccgtctgc acccaaacat cgaggtccgc
      481 caggtcagca gcctcagcga gcttcccgag accgacaact ccttcgatgt cgtcttgacg
      541 ttcaccgtcc tacagcacct cacggacgcg gctgtggtgc gagcaatcgc ggaaatcaag
      601 cgcctcgtgc gcccatccgg gtttgtgctc ctctgtgaag aaaccgatac aagccacgtg
      661 gcaggagacc tcactgatga gggaggtcga tgtacaatag gtcggagtat tagcacgtat
      721 gtgcaactgc ttgcgccatg ccggctcatc gcgacatcgc cccgcaggat agaaccaaac
      781 tatcctgggc tcgacgtagg aacatatatg ctctttcagt ccccccgggc caattcatca
      841 gcgataaagc ccgccgagaa cctgcggagg cttttgaggt tgttcactag tgcacggcta
      901 cgcagcggca tcaagaattt gatatggttc tgaagctcaa tgcgggattt tgctctacgt
      961 gcctgtgtta gccttactgg gctgtaagag tccaggcgat tggaacggga acacccgaga
     1021 agctacgcta ctccgttcgt ggtagcttga caaaaagggt gcagtacagt cacgcactgc
     1081 cagcccttga tgactcctcg cgggggcgca actatcgctg gctgagggtt gatgagcctt
     1141 aaggttatcg aaaggcggcg gagtacgcgg tcgcactcag gaagtcgaga tgatccggca
     1201 cgtcattgcc gctaatactc atcatcgggt gagtggcctc gggcgtaagc cgctgaagcc
     1261 gagcggttat agctcgtgtt cgtcggcatc caccgctaag aggctggcgc accggtcgtg
     1321 cggtaggcat ttccggaaac gcttgactat gcgcccatcg gccgtgtcta gtgcgatgtc
     1381 acgatgtacg tctcagaatc gcgctcactg cgtcgggatg gtccgcaact cctgtctctt
     1441 gtgctgatcc ccagaacttg atgagacgga ccactacgcg tacaatggcc ggtaatggct
     1501 catggaactc cggtgtgcac gcatacacgt gcgctggtgg ttccagtgcg cacctccgga
     1561 cggcggcatc agtagatcct gaggaccctg tggcatacac ctgcgcagct gtcttccgta
     1621 catgccgcct tccaggaccg gtgaccgaca gagacggcca gtaccgcggc aacaccacca
     1681 acgacaggag gtcggcccat gagtgcgcgt gacaccacga acggcatggc cacggcggag
     1741 attatcttca cagggggcca ggtccacacc gtcaatgcgg ggaacgacgt cgtcgaggca
//
LOCUS       DASQSL010001079         2349 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_61022, whole genome shotgun sequence.
ACCESSION   DASQSL010001079 DASQSL010000000
VERSION     DASQSL010001079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2349)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2349)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2349
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61022"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..680
                     /locus_tag="VE844_11200"
     CDS             <1..680
                     /locus_tag="VE844_11200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012637553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent metalloprotease"
                     /protein_id="HZC01894.1"
                     /translation="TAYHESGHCIVGRLVPSHDPVYKVSIIPRGRALGVTMFLPEQDR
                     LSMSKERLESQLCSLFGGRVAEELIFGLEQITTGASNDIERATQIARNMVTKWGLSER
                     LGPLAYSEDEGEVFLGHSVTRHKMMADETAHAIDEEIRKFIDRGYSRAQEILTANMDK
                     LHLMAEALLKYETIESEQIDDLMAGKRPNPPKGWTEDDRRAPPTVKATEDEGEIPGAI
                     GGPASLH"
     gene            817..2172
                     /gene="glmM"
                     /locus_tag="VE844_11205"
     CDS             817..2172
                     /gene="glmM"
                     /locus_tag="VE844_11205"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007146598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_function: GO:0016868 - intramolecular
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HZC01895.1"
                     /translation="MNSDRKYFGTDGIRGKVGTSPITPDFVMKLGWAVGRVLAKSGGG
                     SRVLIGKDTRISGYMFESALEAGLSAAGVDILLLGPMPTPGIAYLTRTFRAQAGIVIS
                     ASHNPYDDNGIKFFANNGMKLADEIEERIEAELEKPLITVPSSELGKAHRITDAAGRY
                     IEFCKSTIGTGSHLNGLKVVIDCAHGATYDIAPNVFEELEAEVIVIGASPNGLNINDK
                     CGATKLKALQSEVLAQQADLGIAFDGDGDRVIMVDHFGEIVDGDELLFIIARERQRKN
                     GLKGGVIGTHMSNLGLEHALRTLGLDFKRAKVGDRYILEMLQSAGWTLGGESSGHIVC
                     LDIMTTGDGIVSALQVLETMISTGQSLHALKSGIRKYPQTLINVRMEQRVDLARLDPI
                     NDAVKQVEGELGENGRVLLRPSGTEPLMRIMVEGIDPGQVERLAGELAATVESTLKSA
                     A"
     gene            complement(2194..2349)
                     /gene="dapD"
                     /locus_tag="VE844_11210"
                     /pseudo
     CDS             complement(2194..2349)
                     /gene="dapD"
                     /locus_tag="VE844_11210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008290621.1"
                     /note="catalyzes the formation of
                     N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and
                     tetrahydrodipicolinate in the lysine biosynthetic pathway;
                     incomplete; partial in the middle of a contig; missing
                     N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
BASE COUNT          561 a          545 c          720 g          523 t
ORIGIN      
        1 tcaccgccta ccatgagtca ggccactgta ttgtaggtag gctggtaccc tctcatgacc
       61 cggtctataa agtgtccatt atcccgcgtg gaagggcgtt gggggtgacc atgttcctgc
      121 cggaacagga tcgcctcagc atgagcaagg agcgattgga gagccagctt tgtagcctct
      181 ttggaggacg ggtggcggag gagttgatct ttggccttga gcagatcacg acgggtgcca
      241 gcaatgatat cgagcgtgcc acccagatcg cgcgcaatat ggtgaccaag tggggtctgt
      301 cagagcggct gggtccgctc gcttacagcg aggatgaagg agaggtgttc ctgggccact
      361 cggtgacccg tcacaagatg atggccgatg agacggcgca tgccattgat gaggagatcc
      421 gtaaatttat cgaccggggc tatagtcgcg ctcaggagat attaacggcc aatatggata
      481 agctgcacct tatggcggag gccttgctca aatatgagac gatcgagagc gaacagatcg
      541 atgatctcat ggccgggaag agaccaaacc cgcctaaggg atggacagag gatgatcgac
      601 gagcgccacc taccgtcaag gcaacggagg acgaaggcga gatcccaggc gcgattggag
      661 gcccggcaag tctccattga tcagccgctg aatagtttaa gggtacgtaa aactgtgtga
      721 ccctcgctcc ttaacgcgag ggtcaatttt tttctggacc agccgaacta gctatttagg
      781 ctttagaagt aaagaattaa acacgagggg gaaagtatga atagcgatag gaagtatttt
      841 ggtacggatg ggatccgcgg caaggtcggt acctctccca tcacccccga ttttgtaatg
      901 aagttaggct gggccgtagg gcgagtcctg gctaaaagcg gggggggtag tcgggtcttg
      961 atcggtaagg atacccggat ctcgggttat atgtttgagt ctgccttgga agctgggctc
     1021 tcggcggcgg gggtcgatat attattattg ggtcctatgc caaccccagg tattgcgtac
     1081 ctcacacgta cctttcgggc acaggccggc attgtgatca gcgcctcaca taacccctat
     1141 gacgataatg gtattaaatt ctttgccaat aacggcatga agcttgccga tgaaatcgag
     1201 gagcgaatag aggcggagct tgaaaagccc ttgataacgg taccctcaag cgagcttgga
     1261 aaggcgcacc ggatcacgga tgctgccggc cgctacattg agttttgtaa gagcactata
     1321 ggcacaggga gtcatctgaa tggtctcaag gtagtcattg actgtgcgca tggggctacg
     1381 tatgacatcg ccccaaacgt atttgaagag ctcgaagcag aagtgattgt tatcggagct
     1441 agccctaatg ggctcaatat caacgataaa tgcggtgcga ccaagcttaa agcccttcag
     1501 tctgaggtcc tggcacagca agccgatcta gggatcgctt tcgatggcga tggcgaccga
     1561 gtgatcatgg tcgatcactt cggcgagatc gtcgatggcg atgaattgct gtttattatc
     1621 gcccgagagc ggcagcggaa gaatggtttg aaagggggcg tgattggcac ccacatgagt
     1681 aatctcggcc tagagcacgc cctacgtacc ttggggctgg attttaagcg cgccaaggtg
     1741 ggtgatcgtt atatcctgga gatgctacag agcgcgggtt ggactttagg gggtgaatca
     1801 tccggtcata tcgtctgcct tgatattatg accactggcg atgggatcgt ctctgcactg
     1861 caagtgctag agaccatgat aagcacagga cagtccctgc atgctttgaa atcgggtatt
     1921 cggaaatacc cgcaaacgtt gatcaatgtc cggatggaac agcgcgtgga tctagccaga
     1981 cttgatccta tcaacgatgc ggtgaagcag gtcgaggggg agctcggtga gaacggtcgg
     2041 gtgctcttgc gtccgtcggg gaccgagccc ttgatgcgga ttatggttga aggtatagat
     2101 ccgggccagg tagaacggtt ggccggtgaa ctggctgcaa cggtcgagag tactttgaaa
     2161 agcgccgctt aaacagcgcg caggagttca tttttgagcg cacgagccta ccgtggccca
     2221 cgtgtcgacc agggtaccgc tgtcgacata ggcacctatg ttgacgtacg atcgtataag
     2281 aaccacattt gatgcgataa aactgccttt gcatacagtg gccggtggtg ctacgcggat
     2341 accgagctt
//
LOCUS       DASQSL010001080         1275 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_196390, whole genome shotgun sequence.
ACCESSION   DASQSL010001080 DASQSL010000000
VERSION     DASQSL010001080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196390"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(497..1201)
                     /locus_tag="VE844_11215"
     CDS             complement(497..1201)
                     /locus_tag="VE844_11215"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZC01896.1"
                     /translation="MAEQVRKSLADMRDSLSPQQERVDQHHNGVKDTGREAAQRAKES
                     TGEPASQAQDTLGQDAHQRRATEAEPWATFHRGSIFDRQGEYDLAEEAYRRVLASGHP
                     EAAPRAAFNLGILFEERGEYDRAVEAYRRAIASEHAEWAPDAVFDLGMLFEERGEYTL
                     AVEAYQQAIASGHSDVASKARLNLGVLFQQRGAYDLAEQAYQQAIDSGHPEVAPKGMR
                     NLRGLPMRFSKRIRRG"
BASE COUNT          227 a          384 c          351 g          313 t
ORIGIN      
        1 ccccttgtgt cacagcacca ctctacagca tcaccgtctc tcgaccgttg cgaggatcgt
       61 ttctgggccg aggatagccg tccttccgaa gaaatcacct atgacgcagg caagcgatgt
      121 atgcttgtac ttgtgaaact aggtgcggat ttttcgaggg ggtgtgcgga tagaggaatc
      181 ggctacgtac ttttcgcgac ccacccctat ccccgcaaat cgcgaatcga ctctgagaaa
      241 cgcgccctag ctgccacatt ggtccgggct tatgcaggat cgtggaaacg ccctaccgag
      301 aaaccctttc taggcacttc ggtacataag cccgctgcta gacactacaa ctgcggcaag
      361 tgcttcgttg tgatcttcgg ccactctcgg tcggtggagg gggtgggttc ctaaggtggt
      421 gcatggtgta tcccgccctc ggagctattc tactcagacg cgatggcgct gcgctagtgt
      481 tttcgccgag ccgcttctag ccccgcctta ttctcttgga gaatctcatg ggcagccctc
      541 ggagattgcg cattccctta ggtgcaacct cgggatgtcc ggaatcgatc gcctgttggt
      601 aggcttgctc tgccaggtcg tatgctcccc tctgctgaaa gagcacacct agattgagcc
      661 ttgctttgga ggcgacgtcc gagtgtcccg aggcgatcgc ctgttggtaa gcttccactg
      721 ccagggtgta ctctccgcgc tcctcgaaga gcatacctag gtcgaacact gcatcaggtg
      781 cccattcggc gtgctccgag gcgatcgccc gtcggtaagc ttccaccgcc cgatcgtact
      841 ctccgcgctc ttcaaagagt atgcctaggt tgaacgccgc tctaggggca gcctccgggt
      901 gccccgaggc gagcaccctt cggtaagctt cctctgctag gtcgtactcg ccttgcctat
      961 caaagatgga accccggtgg aatgttgccc aaggttcggc ctcagtggct ctcctctgat
     1021 gtgcatcttg ccctagcgtg tcttgcgcct ggctggcggg ctctccggtc gattctttag
     1081 cccgctgagc cgcttcgcgc ccggtatcct taacgccgtt gtgatgttga tcgacgcgtt
     1141 cctgttgtgg cgagagggaa tctctcatgt ctgccagaga ctttctgact tgctcagcca
     1201 ctacttgcct tctctttcga actcgacgct tagggtagga tctgagtcct gaaacactga
     1261 gcaaagcaac tacag
//
LOCUS       DASQSL010001081         1120 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_129512, whole genome shotgun sequence.
ACCESSION   DASQSL010001081 DASQSL010000000
VERSION     DASQSL010001081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129512"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1010)
                     /locus_tag="VE844_11220"
     rRNA            complement(<1..1010)
                     /locus_tag="VE844_11220"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          190 a          369 c          287 g          274 t
ORIGIN      
        1 tggtcttcgg agtttgcctg acttcggtaa cctggtaggg cccctaggcc aaacagtgct
       61 ctacggccac aacgcaattc atccgaggct atacctaaat atatttcgga gagaaccaga
      121 tatctctgag cttgattagc ctttcactcc gacccacagg tcatccgccc agttttcaac
      181 ctaggtcggt tcggtcctcc acggggtctt acccccgctt caacctgccc atgggtagct
      241 cgctcagttt cgggtctacc gcctgcgact caaatcgccc tattaggact cgctttcgct
      301 tcggctccgc tcatcgctta accttgccgc agacgagtaa ctcgtcggct cgttatgcaa
      361 aaagcacgcg gtcacggcac aaggccgctc ccaccgcttg taggcacgcg gtttcaggta
      421 ctatttcact ccccttccgg ggtacttttc acctttccct cacggtactt gtccgctatc
      481 ggtcacctag gagtacttag ccttggaggg tggtcccccc agattcagtc cgcgtttcac
      541 gggagcggac ctactcagga acgtccatcg gaagtccatg gtgtttcgtc tacgggacgg
      601 ttgccctctg tggtgcgcgg ttccacgcgc ttcgactact ccatggtttt gtgactgccg
      661 ccggcccatg cacggaccgg gcagagcgcc ctacaacccc ccatgcgcaa cacgtgcacg
      721 cttacacgca tgaggtttgg gctgagtccc ctttcgctcg ccactactcg gggagtctcg
      781 gttgatttcc tttcctccgg gtactgagat gtttcagttc cccggcttgc ccccgcatgc
      841 ctatgtattc agcatgcggt aacgccgcat taccagcgct gggtttcccc attcgggaat
      901 ccacggatca caggctattc agcgcctacc cgtggcttat cgcagccgtt cacgcccttc
      961 atcgactcct ggtgccaagg catccaccat gtgcccttcc tatcttgacg gtgatcaggc
     1021 accactccgg ccgcgaaggc cggcgaggcg cccggtgata cccgttggtt gccggcgatc
     1081 gtcgcgaccg tcggcagttg gcatggttgt gcagttttca
//
LOCUS       DASQSL010001082         1402 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_129515, whole genome shotgun sequence.
ACCESSION   DASQSL010001082 DASQSL010000000
VERSION     DASQSL010001082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1402)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1402)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1402
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129515"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1402)
                     /locus_tag="VE844_11225"
     CDS             complement(<1..>1402)
                     /locus_tag="VE844_11225"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fatty acyl-AMP ligase"
                     /protein_id="HZC01897.1"
                     /translation="TLEHPSTLVELLRWRALHQPERPAYTFLTDEEQKEVHLTYEELD
                     RRARAIATLLQSRSTMGARALLLHPPGLDYITALFGCLYAKVVAVPAYPPRSARIDRT
                     LPRLQAIAKDAGATLVLTTQHTFSSMEFLTSGQPGLVQAEELASLPWVATDDLEDGLE
                     EGWKEPSITSETLAYLQYTSGSTGTPKGVMVSHRNVLHNSAVLHQGWQIPPHGEMVSW
                     LPMHHDMGLVGGVLNPLCNGYHSTLMSPSSFIKWPLRWLQVISRVKDRPTISCAPNFA
                     YDLCARKVTSDGKKENLDLSNWCVAVNGAEPVRIETLERFTKTFEPCGFRWEAFWPGY
                     GLAEATLCVSGGGTTEPPILHQVKKATLANHHVVDAGNDEKGTCTLVGCGQALLNQVV
                     AIVDPASLTRCSPDQIGEIWVSGPSVAQGYWNRAEETESTFQAHLADTGEGPFLRTGD
                     LGYLRNGELFITGRLKD"
BASE COUNT          310 a          395 c          397 g          300 t
ORIGIN      
        1 gtctttaagc cgaccggtga tgaacaactc gccattgcgc agatatccca gatcaccggt
       61 acgcagaaaa gggccctcgc ccgtgtctgc aagatgggcc tggaaggtgc tttccgtctc
      121 ttcggctcgg ttccagtacc cctgagccac actgggcccg gacacccaga tctccccaat
      181 ctgatcgggt gaacagcggg ttaaggaggc gggatcgaca atcgctacca cttgattgag
      241 taacgcttga ccacacccta cgagagtgca cgtgcccttc tcatcattac ccgcatccac
      301 cacatgatgg tttgcgagag tggctttttt gacttgatga aggatggggg gctcggtggt
      361 tcctccaccg gaaacacata gggttgcctc ggcgagccca taacccggcc agaatgcctc
      421 ccaacggaag ccgcagggct cgaaggtctt ggtaaaccgc tcgagcgttt caatccggac
      481 aggctcagca ccgttaaccg ctacgcacca attgcttaga tcgaggtttt ccttctttcc
      541 atcagaggtg accttgcgcg cacaaaggtc gtaagcgaaa ttaggtgcac agctgattgt
      601 gggtctgtct ttgacgcggg agatgacctg cagccagcgc aggggccact tgatgaagga
      661 agagggcgac atcaaggtgc tatggtaacc attacacaat ggattcagca cgcctccaac
      721 gagtcccata tcgtggtgca tcggcagcca gctgaccatc tcgccgtggg gaggtatttg
      781 ccacccttgg tgaagcactg ctgagttatg caatacattg cgatggctta ccatcacccc
      841 tttgggcgta cctgtggacc cagaggtata ttgtagataa gccagtgtct cgctcgtgat
      901 agagggctcc ttccatccct cttccaaccc gtcctccaaa tcatctgtgg ctacccacgg
      961 tagcgaagcg agctcctcgg cctgaaccag ccccggttgg cctgatgtga ggaattccat
     1021 cgaggaaaag gtgtgctgtg tcgtaagtac cagcgttgcc cccgcatcct tcgcgatggc
     1081 ctggaggcgg ggcaatgtgc ggtcgattcg agctgaacga ggagggtagg caggaacagc
     1141 gacaaccttt gcgtagagac atccaaacag agcggtgatg taatccaaac ccggaggatg
     1201 aaggagcagt gcccgcgcgc ccatcgtgct ccggctttgg agcaaggtcg cgatggctcg
     1261 tgccctgcgg tccaattcct cataggtcaa atgaacctct ttttgttcct catccgttaa
     1321 gaacgtatag gccggtcgct ccggctgatg aagcgctcgc cagcgaagga gttcgaccag
     1381 cgtagaagga tgctcaagag ta
//
LOCUS       DASQSL010001083         1874 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_8906, whole genome shotgun sequence.
ACCESSION   DASQSL010001083 DASQSL010000000
VERSION     DASQSL010001083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1874
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8906"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..994
                     /locus_tag="VE844_11230"
     CDS             <1..994
                     /locus_tag="VE844_11230"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZC01898.1"
                     /translation="GWCKLAGMGAEEAQGQGWLGAIHAEDRQRVFHEWHRATQDGRPF
                     ASEYRFHLPDGKVIWLYGTAVALQNDSGEVTGYLGTLTDITERKEADQMKSDFVSFAT
                     HQLRTPLAGIKWLLELAREEPGISEDLLSYIQDARESADRLIKLVNDLLDISRLERGK
                     LTIVPQAIQLGELTQNVLEEVSLLVQEKGHYLTFTVADNTPPVLGDQQLMRQVILNLV
                     SNAIKYTPPKGEIAIEIGQEGAHLRWSIRDSGIGIPKEGLPRLFEKFYRADNAQTIET
                     EGTGLGLYLVRLILEQLAGRIWCESEAGKGTTFFFVLPLPESNNEDAHQADSLG"
     gene            960..1340
                     /locus_tag="VE844_11235"
     CDS             960..1340
                     /locus_tag="VE844_11235"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZC01899.1"
                     /translation="MKTLTKQILLVEDDRFLRRACAAGLRQRGWTVLTAVDGEEALRM
                     VQSERIDLVLLDMLMPKLHGLDVMRALKAEERTQSIPVLVLSNSSRERDVQEIMKLGA
                     VGYLVKANLSLQELGNRVAELLGG"
     gene            1345..1737
                     /locus_tag="VE844_11240"
     CDS             1345..1737
                     /locus_tag="VE844_11240"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZC01900.1"
                     /translation="MGQQSKSILLVEDDRFLRKAAEATLRRHGFLVRTAADGEEALQR
                     VRDEVPDLVLLDLIMPKLQGFEVLRILKQDPATKQIPVVVLSNLGQDSDVQQALQGGA
                     AAYFIKANLSLQDLVTQVQRVLTGGAAT"
BASE COUNT          404 a          527 c          582 g          361 t
ORIGIN      
        1 gggctggtgc aagctggcag ggatgggggc cgaagaggcc caagggcaag ggtggctggg
       61 cgccatccac gcagaggatc gacagcgcgt gttccatgaa tggcaccgtg cgacacagga
      121 tgggcgccca ttcgccagtg aataccgctt tcacttgccc gatggcaagg tcatctggct
      181 ctacggcact gcggtggctt tgcagaatga ttcgggagaa gtgacgggct acttgggcac
      241 gctgaccgac attaccgagc gcaaggaggc cgaccagatg aaatccgatt tcgtctcctt
      301 cgcgacccat cagcttcgca cccctttggc aggcatcaaa tggctcctag agttggcgag
      361 ggaagagccc ggcatctcgg aggatctgct gtcctacatc caggacgcgc gggaatcggc
      421 cgatcgtctc atcaaactgg tcaacgacct ccttgacatt tcgcggcttg agcggggcaa
      481 gctgaccatc gtcccgcaag ccatccaact gggggagctc acacaaaatg tcctggagga
      541 ggtcagcctc ctggtacagg agaaaggcca ttacctgacg tttaccgtgg cggataacac
      601 ccctccggta ctgggcgacc agcagttgat gcgccaggtc atcctgaatc tcgtctctaa
      661 cgccattaag tacacccctc ccaaagggga gatcgcgatc gagatcggcc aggaaggagc
      721 ccacctgcgc tggtcgattc gggacagcgg tatcggcatc ccgaaagagg gcttgccgcg
      781 gctgttcgag aagttttatc gggcagacaa cgcgcagacg atcgagaccg agggcaccgg
      841 attggggctc tatctggtcc ggctcatcct ggaacaattg gcgggtcgca tttggtgtga
      901 gtccgaagca gggaagggga ccaccttctt cttcgtcctg ccactcccgg agtcaaataa
      961 tgaagacgct caccaagcag attctcttgg ttgaagacga tcgatttctg cggcgcgcct
     1021 gcgccgctgg acttcgccag cgcggctgga cggtgctgac cgccgtggat ggcgaggaag
     1081 ccttgcgcat ggttcagagc gagcgcatcg acctcgtcct cctcgacatg ctcatgccga
     1141 agctccacgg ccttgacgtg atgcgagccc tcaaagccga agaaaggacg cagtcgattc
     1201 cggtgctcgt gctgtcaaac tcttcgcgcg aacgggacgt acaagagatc atgaaattag
     1261 gggcggtggg ctacctggtg aaagcgaatc tgtcgttgca ggaactgggc aatcgtgtcg
     1321 ctgagctctt ggggggctga aggaatggga caacagtcga agagtatttt acttgttgag
     1381 gatgaccgct ttctacggaa ggcggccgaa gcgacactcc gccgccacgg cttcctcgtc
     1441 cgcacggccg cagatgggga agaagcgctg cagcgtgtcc gagacgaagt gccggacctc
     1501 gtgttactgg acctgattat gccaaagttg caaggcttcg aggtcttacg cattctgaaa
     1561 caggaccccg cgaccaagca gattcccgtt gtggtgctca gcaacctcgg acaggatagt
     1621 gatgtccaac aggccttgca aggtggcgct gcggcgtact tcatcaaggc caacctttcc
     1681 ctgcaggact tagtcaccca agtgcaaagg gtcctcacag gaggggcagc aacatgaccg
     1741 ggcttcaggt ctctgcagag gagctgaagg gcttgttggt cgatcagtta gaggtcattg
     1801 acgacattgc cttcgagaag gcacacgcca tagcgaatcg gctgcgcctt ccgctcgagc
     1861 acaccctggc tgag
//
LOCUS       DASQSL010001084         1179 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_129518, whole genome shotgun sequence.
ACCESSION   DASQSL010001084 DASQSL010000000
VERSION     DASQSL010001084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129518"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..557
                     /locus_tag="VE844_11245"
     CDS             <1..557
                     /locus_tag="VE844_11245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HZC01901.1"
                     /translation="WRVFLTTDHPNGAPFMSYPHLIRLLMDRSFRNERLAMIHKGAAA
                     SSTLGSIEREYSLYEIAILTRAGPARSLGLLNRGHLGAGAMADITVYREQKDLEKMFA
                     KPEYVFKEGELVVRNGRIVKLTQGATQVVRPDYDRAIEQVLEPYFDRFHTVQMENFKL
                     HDEEILDQGRGRIVVHPCRARATV"
     gene            554..>1179
                     /locus_tag="VE844_11250"
     CDS             554..>1179
                     /locus_tag="VE844_11250"
                     /EC_number="2.3.1.101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014705518.1"
                     /note="catalyzes the transfer of a formyl group from
                     formylmethanofuran to tetrahydromethanopterin
                     tetrahydromethanopterin; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran--tetrahydromethanopterin
                     N-formyltransferase"
                     /protein_id="HZC01902.1"
                     /translation="MKINGVVIDDTFAEAFPMKATRLIITAMTLKWAYVAANSLIGFA
                     SSVIACGCEADIECELEPSETPDGRPGISVLVFAVSIKQLADQVLKRVGQSVMTTATS
                     ACFAGLHGEPYLSLGKSLRFFGDGHQIAKTLNSRRFWRIPVMHGEFVCEDRTGVSAAI
                     GGGNFMVLAKTSRHALTACEKAVQAIRKVPRAVTSFPGGVVGSGSKVGS"
BASE COUNT          232 a          341 c          369 g          237 t
ORIGIN      
        1 cctggcgggt gtttctcacc accgatcacc ccaatggcgc accgtttatg agctatccgc
       61 atctgatccg gctgctcatg gaccgtagct tccgcaatga acgattggcg atgatccata
      121 aaggcgcggc ggcgagcagc accctgggga gtatcgagcg cgagtattcc ttatatgaga
      181 tcgcgatcct cactcgcgca ggcccggccc gcagccttgg gcttttaaat cgcggtcatt
      241 tgggggcggg cgctatggcc gacattacgg tctatcggga gcaaaaggac ctagaaaaga
      301 tgttcgcgaa accggagtat gtcttcaaag agggggaact ggtggtgcgc aacggacgga
      361 tcgtgaagct tacccaaggc gcaacccagg tggtgcggcc cgactacgac cgcgctatcg
      421 agcaggtatt ggagccctac ttcgaccgct ttcatactgt acagatggaa aacttcaagc
      481 tccatgatga agagatcctg gatcaggggc gtgggcggat cgtggtccac ccctgccggg
      541 cgagggcgac ggtatgaaga tcaacggcgt agtgatcgac gataccttcg ccgaggcctt
      601 cccaatgaag gcaacccgcc ttatcatcac ggcgatgacg ctcaaatggg cctatgtggc
      661 cgcgaattcc ctcatcggct tcgcttcgtc ggtcatcgcc tgtggctgcg aagcggatat
      721 cgagtgcgaa ttggaaccct ccgagacccc cgacgggcgg cctgggatct cggtcttggt
      781 gtttgccgtg tcgatcaagc agctggccga tcaggtcctc aaacgggtcg ggcaatcggt
      841 catgaccacg gccacgagcg cctgctttgc agggctacac ggtgaacctt acctcagtct
      901 cggcaagagc ttgcgcttct ttggcgatgg ccatcagatc gccaagaccc taaatagcag
      961 gcgtttctgg cgcatccccg tgatgcatgg cgagttcgtc tgcgaggaca ggaccggtgt
     1021 gtcggccgcc atcggcgggg ggaattttat ggtgctggcc aagacctcac gccatgcgct
     1081 caccgcctgt gagaaagcgg tccaggcgat ccgcaaggtg ccccgcgccg tcacctcctt
     1141 tccagggggg gtggtcggtt ccggatcgaa ggtgggctc
//
LOCUS       DASQSL010001085         1052 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_129550, whole genome shotgun sequence.
ACCESSION   DASQSL010001085 DASQSL010000000
VERSION     DASQSL010001085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129550"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..446)
                     /locus_tag="VE844_11255"
     CDS             complement(<1..446)
                     /locus_tag="VE844_11255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HZC01903.1"
                     /translation="MSRWLGTVTQSQLSRIESGRNRVDTLDKLIHYARSLKMPTDLLW
                     FALPEEKETPKRSGDVFALPDGPLVAATSSHTESALGDSLLETLGLYSRMDNLAGPQP
                     LVNIAPQQLRFVEDLLSNARGRDRKQLLRVGARYAEFAGWIYQDTGA"
BASE COUNT          208 a          323 c          308 g          213 t
ORIGIN      
        1 gcgcccgtgt cctgataaat ccatccggca aactctgcat aacgcgctcc tacgcgcaga
       61 agttgtttgc gatctctgcc gcgtgcattc gataaaagat cttcgacgaa tcggagttgc
      121 tgtggtgcta tgtttacaag gggctgcggg ccggccagat tgtccatgcg tgagtacagg
      181 ccgagcgtct ccagtagcga atcgccaagc gctgactctg tgtgcgagct ggtagccgca
      241 accagtgggc catcaggcaa ggcgaatacg tcaccggaac gctttggagt ctctttctct
      301 tccggcagcg caaaccatag gaggtctgtc ggcatcttca gtgagcgtgc gtaatgtatg
      361 agcttgtcca gcgtgtctac gcggttccgt ccggattcaa tccgactcag ctgggactga
      421 gtaacggtgc cgagccatcg actcacggtc tcctgcggaa gtgccttgtg tccatgcgcc
      481 gggtggtatc tgtacgctcg gacaaccgtc cccatgtcac gagacgcgaa tgagtctcgc
      541 atttggtctg tgcaccaaaa gtcagtcccg aggtcagggg cgtggtcgga cgcgatcccg
      601 ctgagctgac gacatggtgc gcacatgctc gcgcggctgt cgcgggtcag gcgactccca
      661 cacctcatgc agtaccgaac agcggaagtc atgcctgacc ctccgtcacc gaccgtagct
      721 ggtagctgcc caccgtaacc cctcctcagc gccagtatgc gcggcgcgca tataagtcat
      781 gcgttggggg ggcatctacc ctgcacaccc gctcatagct tcgtgcatgg tcacaccctg
      841 ggctaaccgt ccgcagcccg ggactccgga gccccccgcc gaagaggacg tagacagaat
      901 gaggtttcgg taaggatgag cgacaatgtc ctcgacgtcc accgtcgcgc actttccgat
      961 tacaggattg cccttgggct ggaactccgg tcgcgacgaa cgaacgcgga gcactcgttc
     1021 gaaaaactgg cctcgcacag caacattccg gc
//
LOCUS       DASQSL010001086         3208 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_61074, whole genome shotgun sequence.
ACCESSION   DASQSL010001086 DASQSL010000000
VERSION     DASQSL010001086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3208
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61074"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            216..938
                     /gene="pyrF"
                     /locus_tag="VE844_11260"
     CDS             216..938
                     /gene="pyrF"
                     /locus_tag="VE844_11260"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009150940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HZC01904.1"
                     /translation="MLQKLSTKPIPPRERLIFALDVPNQAQALDLIDRLGDAVLFYKL
                     GLELFMSGDYFKLTDRLLSLGKKIFADLKFFDVPETVARAVRRLRSHGVHFTTVHGND
                     RMLEAAVQEKGTLKILAVTVLTSLDQCDLEDLGFTCDVEQLVLSRARRALKLSCDGVI
                     SSGLEAAKLRQELGEHFLIVTPGIRPVENRQIDDQKRTVTIEQAFINGADYSVVGRPI
                     RDAEDPRKAAEDIQQTIRSLFG"
     gene            984..1961
                     /gene="mch"
                     /locus_tag="VE844_11265"
     CDS             984..1961
                     /gene="mch"
                     /locus_tag="VE844_11265"
                     /EC_number="3.5.4.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013442343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018759 - methenyltetrahydromethanopterin
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methenyltetrahydromethanopterin cyclohydrolase"
                     /protein_id="HZC01905.1"
                     /translation="MNQALHNLPSVNALTAPLVRAMIDEAVALRLAVEKLANGTVVVD
                     AGIEVPGGLEAGRRIAEICLGGLGQVRLRAGTAFANWPWHLDVHTSDPVIACLGSQYA
                     GWSLDHGEGKGAFRALGSGPARAMGSREELFDELGYRDKGACACMVIEVGQLPPVEIA
                     DKIANQCGITPANLTLILTPTSSLAGGVQVVARSLEVALHKVHALGFPLEAIIDGAAT
                     APVCPPSRDFITAMGRTNDAILFGGQAHLFVDGSGADAADLAQKLPSSASKDYGKPFA
                     QIFKDCNYIFYNIDPMLFSPARVSVTSLKTGKTFHAGRLDEKLLEQSFS"
     gene            1982..2905
                     /locus_tag="VE844_11270"
     CDS             1982..2905
                     /locus_tag="VE844_11270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007039282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RimK family alpha-L-glutamate ligase"
                     /protein_id="HZC01906.1"
                     /translation="MLHSPCVAIVTDDPGWHGRELRQAFAARGYDSVYISLTECWIDL
                     SDPRLVILPGFEREILPIGVFVRGVPGGTLEQVIVRLDVLHGLRELGSLVYNDARTIE
                     RTVDKAMTSFLLKRAGIPTPATWICESEQEARSIVIRELGRGKRMVMKPLFGSQGIGV
                     TLIETPAALPAPVDFGGVFYLQSFIERPDHDWRDWRVFVIGGRAQAAMLRRNDSWITN
                     RAQGGHCEPVVLGQELAGLAEDAVRAVNMDYAGVDLLEDEEGRLVVTEINSIPAWLGL
                     QGVCSFNVAERLVDHFLSRIAASRALEKAVP"
     gene            2911..>3208
                     /locus_tag="VE844_11275"
     CDS             2911..>3208
                     /locus_tag="VE844_11275"
                     /EC_number="2.4.2.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014188368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046917 - triphosphoribosyl-dephospho-CoA
                     synthase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triphosphoribosyl-dephospho-CoA synthase"
                     /protein_id="HZC01907.1"
                     /translation="MLQAGTAEPLAALVLASCRLDIEALKPGNVSVYSEGHGMTAADF
                     LRSADVIAPVITTPGFSVGERIWRSVEITKAWVGCNTNLGIILLCAPLVHAMFLP"
BASE COUNT          684 a          850 c          965 g          709 t
ORIGIN      
        1 gaaatgaccg gtctagatta gtattgcaag cccagaaagc caaggataag cgaagaacct
       61 ttgaaaaaga gaagaaaaaa cagagagggg agaagcaaaa atccccatct catccaaatg
      121 gagttatgcg acacgctcta actactgagt cgttagcata aaagtgtgtt gtcttggtat
      181 tatggagcac tatttatgac atccttttat cctaaatgtt acaaaaatta tcaaccaaac
      241 ccattccacc gcgcgagcgg cttatcttcg cactggatgt tcctaaccag gcccaagcac
      301 tcgatctcat cgatcgtctc ggcgacgccg tgctgttcta taaattgggc ctggaactct
      361 ttatgtcggg ggactatttc aagctcaccg atcggctgct gagtctaggc aagaagatct
      421 ttgcagatct caagttcttt gatgtgccag agaccgtcgc ccgtgctgtg cgccgactca
      481 ggagccacgg ggtccatttt accactgtgc atggcaacga ccggatgctg gaggcggccg
      541 ttcaagaaaa gggcacgctc aagatcctgg ctgtcaccgt gctcacgagc ctggatcaat
      601 gtgatcttga agatttgggg tttacctgcg atgtcgaaca attggtgtta tcccgcgcca
      661 ggcgcgcact taagctcagc tgcgatgggg tgatctcctc cggtcttgaa gcggccaaac
      721 tgcgccagga attgggtgaa cattttctta ttgtgacacc tgggatccgc ccggtcgaga
      781 accggcaaat cgatgatcaa aaacgcaccg tgaccataga gcaagccttt atcaatggcg
      841 ccgattatag tgtggtggga cggcctatcc gcgatgcgga agatccccgg aaagccgctg
      901 aggatatcca gcaaacaatt agatcgctgt ttggctaaat gttgacacag taactcgttg
      961 aaacgacgac agagaaaata ccaatgaacc aagcactaca caatcttcca agcgtgaatg
     1021 cgcttacagc acccctggtg cgggcgatga tcgatgaggc ggtggccttg cgactggcgg
     1081 tcgagaagct cgccaatggc acggtcgtcg tcgatgcggg tattgaggtt ccgggtggac
     1141 tcgaagcggg tcggcggatc gccgagatct gtctgggcgg gctcgggcag gtccgcctgc
     1201 gggcggggac ggcgtttgcc aattggcctt ggcatctgga tgtgcatacc tcggatcccg
     1261 tgatcgcctg tctaggcagc cagtacgcgg gctggagcct ggaccatggc gaaggcaagg
     1321 gcgcctttag ggccctggga tcgggacccg cgcgcgccat gggaagccgg gaggaattat
     1381 tcgatgagct cggttatcgg gataaaggcg cgtgtgcctg tatggtcatc gaggtcggac
     1441 aactgccgcc ggtcgagatc gccgataaga tcgccaacca atgcgggatc acgcctgcaa
     1501 atctaacctt gatcctgacc ccgaccagca gtctcgcggg cggcgtgcag gtggtcgccc
     1561 gttccttgga ggttgccctg cataaggtgc atgctttagg atttccgtta gaggccatca
     1621 tcgatggtgc tgctaccgcg cccgtctgtc cgccctcccg agatttcatt accgccatgg
     1681 gccggaccaa tgatgcgatc ctgtttggcg gccaagctca tttattcgtg gacggcagcg
     1741 gtgccgatgc cgccgatctt gcccaaaaac tacccagcag cgcttcaaaa gactatggga
     1801 aaccctttgc tcagatcttc aaggattgca actacatctt ttacaacatc gatccgatgt
     1861 tgttcagtcc cgcccgggta agtgtaacct ccctcaaaac cggcaagacc ttccatgcgg
     1921 gaagacttga tgagaaactg ctcgagcagt cgttcagtta acacggagca ttggatcgca
     1981 cgtgctgcat agtccatgcg tcgctattgt gacggatgac ccgggctggc atggccgtga
     2041 gctacggcag gcgtttgcgg cgcggggcta tgacagcgtt tatatctcgc tcaccgagtg
     2101 ttggatcgat ctcagtgacc cacgactcgt tattcttcca ggctttgaac gggaaattct
     2161 gccgataggc gtgtttgtgc gcggcgttcc gggcggcacc ctggagcagg tgatcgtacg
     2221 tttggatgtg ctgcatggat tgcgcgagct cggtagcctg gtctacaacg atgcccggac
     2281 catcgagcgc acggtggata aggcgatgac gagtttcctg ctcaagcgcg ccgggatccc
     2341 tacccccgct acctggatct gtgaatcgga gcaagaggcc cgatcgatcg tcatccgcga
     2401 gctcggccgc ggtaagcgga tggtgatgaa accgctgttt ggatctcaag ggatcggcgt
     2461 gaccttgata gagacgccgg ctgccttgcc tgcgcctgtg gattttggcg gggtgttcta
     2521 tctgcaatcg tttatcgaac ggccagatca cgattggaga gactggcgtg tattcgtgat
     2581 cggcggccga gcgcaggcgg ccatgctgag gcgcaatgac tcctggatca ccaaccgggc
     2641 ccaggggggg cattgtgaac cggtggtact cggtcaggaa ctcgccggtc tcgccgagga
     2701 tgccgtgcga gcggtgaata tggactatgc cggggtggat ctgctcgagg acgaggaggg
     2761 gcggctggtc gttaccgaga tcaatagcat acccgcctgg cttgggttac agggggtgtg
     2821 tagctttaat gtcgccgaac gcctggtcga tcatttccta tcccggatag ccgcctcacg
     2881 ggcacttgag aaggctgtgc cgtgaagacg atgcttcaag cgggcacagc agagccactg
     2941 gcagcgctcg tacttgccag ttgccgactg gatatagaag ccctgaaacc cggcaatgtc
     3001 agcgtctatt cggaggggca tgggatgacc gccgccgact ttctccgcag cgctgacgtg
     3061 atcgcgcctg tcatcaccac accggggttc tcggtaggag aacggatctg gcgcagtgtc
     3121 gagatcacta aggcttgggt cggctgtaat accaatcttg ggattattct gctttgcgca
     3181 ccgctggtgc atgccatgtt tttgcctg
//
LOCUS       DASQSL010001087         1286 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_186033, whole genome shotgun sequence.
ACCESSION   DASQSL010001087 DASQSL010000000
VERSION     DASQSL010001087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186033"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            319..639
                     /locus_tag="VE844_11280"
     CDS             319..639
                     /locus_tag="VE844_11280"
                     /inference="COORDINATES: protein motif:HMM:NF024736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01908.1"
                     /translation="MEWKLFADLFPAEPTKRGRGMPHTSFRQVINTLLYILVTGCRWC
                     DLPRGPQWASKSAAHRWLQRWQADGTLAARQARLLGLAEERGMIQWQYGGVDGSFSPW
                     PRRR"
     gene            605..1108
                     /locus_tag="VE844_11285"
     CDS             605..1108
                     /locus_tag="VE844_11285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016861523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01909.1"
                     /translation="MAPFPPGQGGGEGIAYGRKGKGILIHSLTDGAGMPWSTHTTPAN
                     GDERAQVLPLLDSLHIRTGKRGSPRKRLTVLAMDKGYDAKDLRHRLRRRGIRPQIPKR
                     VWKSRKPRGRPIKKDVPRYQVERTFAWFQRKYRRLVVRWERLATCFNAFLAVAMLHMW
                     IQKLIVG"
BASE COUNT          267 a          380 c          386 g          253 t
ORIGIN      
        1 ggaacaacat ttggccgctg aatctccatc catgagtcag gcattatagg ctatctctcg
       61 gcctgtgaga tctcgggcat aagaggccct atgtcattca atgcagggat gactcaccag
      121 cagcacggac atctcgacga agccaaggcc gcttatctac gggccgttgt ggagctgagt
      181 cccgaactgc tgtagagcct catcgagcgt ctgcaaatgg tcgtatgaac ctatcccact
      241 aagatggctt cccatgctat agtgccctca atctcagagg agggcacgat ggctggaacc
      301 ttcgaagggt gaagcgactt ggagtggaag ctgtttgccg atctctttcc tgcagagccg
      361 accaaacggg ggcgtggcat gccgcatacg tcctttcgtc aggtcatcaa cacattgctc
      421 tacatcctgg tcaccggttg ccgctggtgt gatctccccc gcggccccca atgggcgtcc
      481 aagagtgccg cacatcggtg gctgcagcgc tggcaggccg atggcaccct cgcggccagg
      541 caagcccggc tgcttggact ggccgaggag cgcgggatga ttcagtggca atacggtggt
      601 gtggatggct ccttttcccc ctggccaagg cggcggtgag gggatcgcct atggccgcaa
      661 aggcaaaggg atcctcatcc atagcctcac ggatggtgcg ggcatgccat ggtctacgca
      721 cacgacgccg gccaatgggg acgagcgggc tcaagtcctg cctctgctgg atagcctcca
      781 tatccgcacc ggcaagcgag gcagcccccg taaacgcctc acggttctgg ccatggataa
      841 ggggtatgac gccaaagacc tccggcatcg cctccgccga cgcggaatcc ggccccagat
      901 tcccaaacgc gtgtggaaga gccgcaaacc gcgggggcgg ccaatcaaaa aggacgtgcc
      961 tcgctaccaa gtcgagcgga cgtttgcctg gtttcagcgg aagtaccgac gcttggtggt
     1021 gcgctgggaa cgtctcgcca cctgcttcaa cgcgtttctt gccgtggcca tgcttcacat
     1081 gtggatccag aagctaatag tgggataagt tcatggagtg ctcccctcag gagccggact
     1141 ctgcacgcaa gggcggctca gcatcggcag tatggggcaa aagtaccctt agataagcgg
     1201 gttgatcccg agatttctag ggatctcatc gcgcccctaa aatcggtgat tgcccatgga
     1261 agcattcccg gaccgcctca ttaagg
//
LOCUS       DASQSL010001088         1195 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_145608, whole genome shotgun sequence.
ACCESSION   DASQSL010001088 DASQSL010000000
VERSION     DASQSL010001088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1195
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145608"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..476)
                     /locus_tag="VE844_11290"
     CDS             complement(<1..476)
                     /locus_tag="VE844_11290"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase family protein"
                     /protein_id="HZC01910.1"
                     /translation="MPGKHADRQEVDKAFGTYRFGSRQMTGRFNILRFVCVGSINFDV
                     IFQASRLPQEHEKLRVQDATLCCGGSAANTAYWLARFGHNVSMVGCVGKDELGRSGIE
                     SLRIAGVDTSCIQMSNKATTGVATVLVNSNSKRMITYAGANTELDLTTLDPSVFHKG"
     gene            complement(522..>1195)
                     /locus_tag="VE844_11295"
     CDS             complement(522..>1195)
                     /locus_tag="VE844_11295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007917921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS6 family transposase"
                     /protein_id="HZC01911.1"
                     /translation="YKHHRFPAEIISHAVGCYCRFCLSDPDVEELLCVRGVIVSYEAI
                     RQWRRRFGQPYANQLRRRPRSGHMWHLDEVFLTSRGERHDLWRGVDQDSHVLDILVQR
                     RRDKHAAKNFFRKLLKGLAYIPRVNITDKLQSDGAAKREMLPSVDQRQHRSLNNRAEN
                     SHQPTRQRKRRMQGVKSPGHAQRFLATDGPMAPHVRPRRHLLPASIYRHEMRHRLHTW
                     QELTS"
BASE COUNT          249 a          327 c          344 g          275 t
ORIGIN      
        1 cctttgtgaa aaacacttgg gtcgagtgtg gttaaatcta gttcagtatt tgcgcccgca
       61 taggtgatca tccgcttgct attagaattt actaggactg ttgcgacacc agtggtagcc
      121 ttgttagaca tctggataca tgacgtgtct acaccggcaa ttcggagaga ctcaatacct
      181 gaacgtccca actcatcctt tccgacacac cctaccatag aaacattgtg cccaaatctt
      241 gctaaccaat aggccgtatt ggctgccgat ccaccacaac acagagttgc atcctgtact
      301 cggagttttt catgctcttg gggcaatcga gaagcctgaa aaatcacgtc aaaatttata
      361 cttccaacgc aaacgaatcg aaggatgtta aaacggccag tcatttggcg actcccaaaa
      421 cgataagttc caaaggcttt gtcaacttct tgcctgtcag catgctttcc gggcatatgg
      481 gtgcatgatc gcctaagtcg tatcccttag gccacggtcg gtcagctcgt cagttcctgc
      541 caggtgtgca atcggtgccg catctcgtgg cgataaatgg atgcaggtaa gaggtgtcgt
      601 cgcgggcgga cgtgtggggc catgggacca tcggtggcga ggaagcgctg ggcgtgtcct
      661 ggcgatttaa cgccttgcat ccgtcgcttc cgctgacggg ttggctgatg ggaattctcc
      721 gcgcggttgt tcagggagcg atgctgccgc tggtccacac tgggcagcat ctcccgcttc
      781 gcggcgccat cgctttggag cttgtcggtg atgttcaccc ggggtatgta ggccaagccc
      841 ttgagcagct tccggaagaa gttcttggcg gcatgcttgt ctcgccgacg ttggactaag
      901 atatcgagga catggctgtc ttgatccacg ccccgccaga ggtcgtgtcg ctcgccacgg
      961 ctcgtgagga acacctcgtc gaggtgccac atgtggccag atcgggggcg ccgccggagc
     1021 tgattcgcgt acggctggcc aaatctccgg cgccactggc ggatggcctc gtaggacacg
     1081 atcacgccgc ggacgcacag gagttcctcc acatcggggt cgctgaggca gaagcggcaa
     1141 tagcacccaa ccgcgtgact gatgatctcg gccgggaagc ggtgatgctt gtagc
//
LOCUS       DASQSL010001089         1207 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_158678, whole genome shotgun sequence.
ACCESSION   DASQSL010001089 DASQSL010000000
VERSION     DASQSL010001089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158678"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..399
                     /locus_tag="VE844_11300"
     CDS             <1..399
                     /locus_tag="VE844_11300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HZC01912.1"
                     /translation="DPGPTQANFVSPGGFKAYEHQWAMPEAFAFHQSIGRKRIAERIA
                     ALSTQCKEGLARMSHIKLHTPRSPEVSAGINCFEVVGMAPATAVQKLLEKKVIASASP
                     YKASYVRLAPSLVNDEQQIDQALRAVYALA"
     gene            594..>1207
                     /locus_tag="VE844_11305"
     CDS             594..>1207
                     /locus_tag="VE844_11305"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HZC01913.1"
                     /translation="MKNRKLVLAIFGLMVFALAGVPKAAEVPGEKSAAGTEALEQEAV
                     SLLSEYLRVDTTNPPGNEVKAAQFFKTIFDREGIEARILESAPGRGNIYARLKGDGSK
                     KALVLMNHMDVVPADRRYWSVDPFAGVVKDGFIWGRGALDMKGMGIVELMAMLALKRQ
                     GILLKGDVIFLGVADEEVGGAMGAGFIVREHFDLLKNAGTVLNE"
BASE COUNT          250 a          335 c          392 g          230 t
ORIGIN      
        1 gaccccggcc ccacgcaggc aaattttgtc tcgccgggcg ggttcaaagc ctatgagcac
       61 cagtgggcta tgccagaggc cttcgccttt caccagtcca ttggccgcaa gcgcatcgcc
      121 gagcgcattg cagcgctgag cacgcagtgc aaggagggcc tcgcgcgcat gtcgcacatc
      181 aagctacata cgccgcgttc gccggaggtc tctgccggga tcaactgttt cgaggtcgta
      241 ggaatggctc ccgccacggc ggtgcagaag ctgctcgaaa agaaggtgat cgcctcggca
      301 tcgccttaca aggcctccta cgtgcgcctc gcgccgagct tggtcaacga tgagcaacag
      361 attgatcagg ccctgcgcgc ggtgtacgcc ctagcctgaa cgatggcgtg aagcacaaca
      421 tatctttcaa ggtaagtgag caagtgtgcc gcccaacaat cgcttccagc cgacgggcct
      481 cgctccgctc ggcccgcggc tgaagcgcgg cgttaggcga tttgcatcgc gcagaggatg
      541 tgccaatttc ttcgagcaaa ccttaataaa cccattgtga gcagggagag gctgtgaaaa
      601 atcgcaagct tgtgctggcc atattcgggc tcatggtgtt tgccttggcc ggtgtgccga
      661 aggccgcgga ggttccaggc gagaaaagtg ccgccggcac ggaagctctg gagcaggaag
      721 ccgtctcgct gctcagcgaa taccttcggg tggacaccac taacccacct ggaaacgagg
      781 tcaaggcggc tcagttcttc aagaccatct tcgatcggga agggatcgag gcgcgcatcc
      841 tggaatcggc cccgggacga ggaaatatct atgcacgcct taaaggggat ggatcgaaga
      901 aggccctcgt cctcatgaat cacatggacg tcgtcccggc ggacagacgg tactggtcag
      961 tggacccctt cgccggcgtg gttaaggatg gctttatctg gggccgcggg gccctggaca
     1021 tgaagggaat ggggatcgta gaactgatgg ccatgctggc tctgaagcgc caagggattc
     1081 tcctgaaggg ggatgtcatc ttcctggggg tggccgacga ggaggtgggg ggtgctatgg
     1141 gcgcggggtt catagtcagg gagcacttcg acctgctgaa gaacgcgggt accgttttga
     1201 atgagtt
//
LOCUS       DASQSL010001090         1479 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_76511, whole genome shotgun sequence.
ACCESSION   DASQSL010001090 DASQSL010000000
VERSION     DASQSL010001090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1479
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76511"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..552)
                     /locus_tag="VE844_11310"
     CDS             complement(<1..552)
                     /locus_tag="VE844_11310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011197192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HZC01914.1"
                     /translation="MAKERFVRTKPHVNIGTIGHIDHGKTTLTSAITKVLAQRKLANY
                     IAFDQIDKAPEERERGITIAIAHVEYETDKRHYAHVDCPGHADYIKNMITGAAQMDGA
                     ILVVAATDGPMPQTREHILLARQVGVPAIVVYMNKCDAVDDPELLELVELEVRELLSK
                     YEFPGDDTPIIRGSALKALEGDPN"
     gene            complement(638..>1479)
                     /gene="fusA"
                     /locus_tag="VE844_11315"
     CDS             complement(638..>1479)
                     /gene="fusA"
                     /locus_tag="VE844_11315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011365698.1"
                     /note="EF-G; promotes GTP-dependent translocation of the
                     ribosome during translation; many organisms have multiple
                     copies of this gene; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HZC01915.1"
                     /translation="LGVALHKLAQEDPTFKISTDRETGQTLISGMGELHLEILVDRLF
                     RDFSIGANVSKPQVAYKETIKRAVKTEGKFVRQSGGRGQYGHVWLEIEPLERGAGFEF
                     IDAVIGGAIPREYIPAVKQGVQEALEAGIFAGYPVIDIRVKVYDGSYHDVDSSELAFK
                     IAGSMALKEGAKKAGGVLLEPVMDVEVVTPEEFMGDVIGNLNSRRGNIKAVTTRAGAR
                     VISARVPLSEMFGYATDLRSLSQGRATYTMHFSSYQEIPFNLAEELLFKGRKGQAAKE
                     LAM"
BASE COUNT          293 a          438 c          386 g          362 t
ORIGIN      
        1 attgggatca ccttcaagag ctttcagcgc actcccccgg ataatcggcg tgtcatcccc
       61 cgggaattca tacttgctga gaagctcccg cacttctaac tcgacgagct cgaggagctc
      121 cgggtcgtct accgcatcgc acttattcat gtacaccacg atggctggca caccgacctg
      181 gcgcgccagc aggatgtgct cacgcgtttg cggcatgggc ccgtcggttg cagccacgac
      241 caaaatggct ccatccatct gggcggcgcc ggtgatcatg ttcttaatat aatcggcgtg
      301 acccggacaa tcgacgtgag cgtagtggcg tttatcggtc tcatactcga cgtgcgcgat
      361 agcgatcgtg ataccgcgct cccgctcctc tggtgctttg tcgatctggt caaatgcgat
      421 gtagttcgct aacttgcgtt gtgccaatac cttggtaatt gcgcttgtca acgtcgtctt
      481 gccatgatcg atgtgcccga tggtgccgat gttgacatgc ggctttgtcc ggacaaaccg
      541 ctccttcgcc atacccccct cctcattacc atatcgccgt gcatctgact acgcgcctat
      601 cacgctggta acctctaggt tcctcacgtg ggttggctta catggccagt tcttttgccg
      661 cttgcccttt cctccccttg aagaggagtt cctccgctag gttaaaggga atttcttgat
      721 acgagctgaa gtgcatggta taagtcgcgc gtccctgcga taatgatcgg agatcggttg
      781 cgtagccgaa catttcagag aggggcacgc gtgccgagat gacgcgagcg cctgcacgtg
      841 tggtcaccgc tttgatgttc ccgcgacgag aattcaggtt gccgataaca tcccccataa
      901 attcctcggg ggtcaccact tcgacatcca tcaccggttc aagcaacacg ccaccggcct
      961 ttttggcgcc ttctttcagc gccatggagc cggcgatctt gaaggccaat tctgaggaat
     1021 cgacatcgtg gtatgatccg tcatacacct tcactcggat atcgatgacc ggatagccgg
     1081 cgaagatacc tgcctcaaga gcctcctgaa cgccttgctt gacggccgga atatactcgc
     1141 gagggatagc gccgccgatg accgcgtcga tgaattcaaa accggcaccg cgttctagcg
     1201 gttctatttc caaccacaca tggccgtact ggccacggcc accggattgc cgcacgaatt
     1261 tcccctcggt cttcacggcg cgtttgatcg tttctttgta ggccacttgg ggtttagaaa
     1321 cgtttgctcc gatactgaaa tcgcggaaca agcggtcgac gagaatttcc aaatgtagct
     1381 cgcccattcc agaaatcaac gtttggccag tttcccgatc ggttgagatc ttgaaggtgg
     1441 ggtcctcctg ggccaatttg tgcagcgcca cgcctagtt
//
LOCUS       DASQSL010001091         2531 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_196462, whole genome shotgun sequence.
ACCESSION   DASQSL010001091 DASQSL010000000
VERSION     DASQSL010001091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2531
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196462"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            134..1315
                     /locus_tag="VE844_11320"
     CDS             134..1315
                     /locus_tag="VE844_11320"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014779713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HZC01916.1"
                     /translation="MAERIVIVAAGRTAIGNFGGTLANIPAAALGTRVISALLQKMGI
                     KPEQIDEVILGQVLTAGVGMNPARQAAINAGIPAEVPCMTINKVCGSGLKAIALAAQS
                     IRAGDAELIVAGGQENMSLAPHVLPGSRNGQKMGEWKLIDSMINDGLWDVFNNVHMGI
                     TAENIVKKYGITREEQDAFAAASQQKAEAAQKAGKFKEEIIAVEIPQKKGEPLLFDTD
                     EFPRHGTTVESLSKLRPAFDKGGTVTAGNASGINDGAAAVIVTTANKAETLGLKPIAY
                     IVAYATAGVDPAIMGTGPIPATQRCLKKAGWRVHDLDLIEANEAFAAQAISVNRELGW
                     DVDKVNVNGGAIALGHPIGASGARVLVTLLHELKRRGAHKGLATLCIGGGQGVAMAVE
                     R"
     gene            1336..2088
                     /gene="phbB"
                     /locus_tag="VE844_11325"
     CDS             1336..2088
                     /gene="phbB"
                     /locus_tag="VE844_11325"
                     /EC_number="1.1.1.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012638082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018454 - acetoacetyl-CoA reductase
                     activity [Evidence IEA];
                     GO_process: GO:0042619 - poly-hydroxybutyrate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetyl-CoA reductase"
                     /protein_id="HZC01917.1"
                     /translation="MKTRLEGRVALVTGGTGGIGAAICKQLADSGAKVATNYRNEEKA
                     QKWLAGTKAQGYDFKIYQIDVADFDACKELVARIEQDLLGPIDIVVNNAGITLDATLR
                     KMSREQWRQVLSINLDSVFNISRHVIQGMMDRGFGRIINISSINGQKGQIGQTNYSAA
                     KAGMHGFTMALAQEVARKGITVNTVSPGYIATDMVMAVAEDIRNQIIAQIPVGRLGKP
                     EEVAYVVDFLASNEAGFITGANFAVNGGQHIM"
     gene            2101..>2531
                     /gene="phaR"
                     /locus_tag="VE844_11330"
     CDS             2101..>2531
                     /gene="phaR"
                     /locus_tag="VE844_11330"
                     /inference="COORDINATES: protein motif:HMM:TIGR01848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate synthesis repressor PhaR"
                     /protein_id="HZC01918.1"
                     /translation="MVTVMQEPNSEKPAMGDKRLIKKYPNRRLYDTTESHYITLEDVR
                     RLVVQGIEFCVTDQKTGEDITRSILLQIILEQEDDGEPIFTTNVLLRIIRCYGDAVQG
                     LAGEFLERSLSLFTEQQKLFQARLDGAIKNNPFTAITELTQR"
BASE COUNT          608 a          676 c          752 g          495 t
ORIGIN      
        1 ggtggaggag agggtgaagg cttaaaatcc tctggatccc cctcgcatac tctgctacgc
       61 tgcactgcag cgtctagccg acgcccctac tttgaagagc tatcgtctat aattgattta
      121 agagaggaaa accatggcag aaagaatagt gattgtggct gcaggccgta cggcaatcgg
      181 caactttggg ggtaccctgg cgaacattcc agccgctgcc ttgggtacaa gagtgatctc
      241 tgcccttctg caaaagatgg ggatcaagcc cgagcagatc gacgaggtga tcctggggca
      301 ggtgttgacc gccggtgtgg gcatgaatcc ggcccggcag gcggcgatca acgcaggcat
      361 ccccgccgaa gtcccgtgta tgacgatcaa taaggtctgc ggcagcgggc tcaaggcgat
      421 cgctttggcg gcgcaatcga tccgggccgg tgatgcggaa ctgatcgtgg ccggtgggca
      481 ggagaacatg agccttgctc cccatgtatt gcctggctcg cgcaatggtc agaagatggg
      541 cgagtggaag ctcatcgaca gcatgatcaa cgatgggctg tgggatgtct tcaacaatgt
      601 gcatatgggg atcaccgccg aaaacatcgt caagaaatat gggatcacgc gcgaggagca
      661 agacgccttt gctgcggcct cccagcagaa ggccgaggcc gctcaaaagg ccggcaagtt
      721 caaggaggag atcattgccg ttgagatccc ccagaagaag ggcgagccgc tcctctttga
      781 taccgacgaa tttccccgcc acggtaccac cgttgagagc ttaagcaagc tccgccccgc
      841 ctttgacaag gggggcacgg tcacggcggg gaatgcctcg gggatcaacg atggggccgc
      901 cgctgttatc gtgaccaccg caaacaaggc agagaccctc ggccttaaac cgatagccta
      961 cattgtggcg tacgcgaccg cgggtgtcga tccggccatt atgggtacgg gccctatacc
     1021 ggctacacag cggtgcctta agaaggcggg ttggcgggtg cacgatctcg atctcatcga
     1081 agccaatgaa gcctttgccg ctcaagcgat ctcggtaaat cgagagctcg gttgggatgt
     1141 cgataaggtc aatgtaaacg gtggcgccat cgccttgggt catcccatcg gcgcctcagg
     1201 cgcccgggtt ttggtcacac ttctgcatga gctgaaacgt cgcggcgccc acaaggggct
     1261 cgccaccctc tgcatcggcg gtggacaagg tgtggctatg gcggtggaaa gataggaata
     1321 aggagctatt gaggaatgaa aaccagacta gagggcagag tagccttagt caccggcggc
     1381 accggcggta ttggagcggc gatctgtaaa cagctcgccg attccggggc caaggtggcg
     1441 accaattacc gcaatgagga aaaggctcaa aaatggctgg cagggactaa agcccaaggc
     1501 tatgacttta aaatctatca aatcgatgtc gcagactttg atgcctgcaa ggaattagtt
     1561 gcacgcatcg aacaggacct cctcggcccg atcgatatcg tcgtcaacaa tgctggcatc
     1621 accctggatg ctaccctgcg caagatgagc agggagcaat ggcgccaggt gttaagcatc
     1681 aatctcgaca gcgtgttcaa tatcagtcga cacgtgatcc aggggatgat ggatcggggc
     1741 tttggccgga tcatcaacat ctcctcgatc aacggccaga aaggccagat cggacagacc
     1801 aattactccg ccgccaaggc cggcatgcat ggctttacca tggctttggc ccaggaggtg
     1861 gctagaaaag gcatcaccgt caataccgtg tctcccggct atattgctac cgatatggtc
     1921 atggccgttg ccgaagacat ccgcaatcag atcatcgccc agatcccggt cggtcgcttg
     1981 ggtaagcccg aagaagtcgc ttatgtcgtc gatttcctgg cctccaatga ggctggcttt
     2041 attactggcg cgaattttgc cgtcaatggc ggacagcata taatgtaagg aggtggtact
     2101 atggtgaccg taatgcagga acctaattca gaaaagccgg cgatggggga caaacgcctt
     2161 atcaagaaat atccaaaccg gcggctctat gataccacgg agagccacta cattacctta
     2221 gaagatgtac ggcgcctggt ggtgcagggg atagagttct gcgtcactga tcaaaagacc
     2281 ggtgaagaca tcacccgcag catcctgctt cagatcatcc tggaacaaga ggacgatggc
     2341 gagccgatct ttaccaccaa tgtgctgctg cggatcatcc gctgctatgg cgatgcagtg
     2401 cagggattgg cgggagagtt cctggaacgc agcctgtccc tatttaccga gcaacagaag
     2461 ttattccagg cccggctcga cggggcgatc aagaataatc ccttcaccgc catcaccgaa
     2521 ctgacccaac g
//
LOCUS       DASQSL010001092         1751 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_129672, whole genome shotgun sequence.
ACCESSION   DASQSL010001092 DASQSL010000000
VERSION     DASQSL010001092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1751
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129672"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1283)
                     /locus_tag="VE844_11335"
     CDS             complement(<1..1283)
                     /locus_tag="VE844_11335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01919.1"
                     /translation="MNRDESHFIYFGTHHVWGTPIATTDDDRRRHLYIIGRPGAGKSR
                     LMENLFLQDVYAGGGAAFIDPHGTSAERILDLIPSYRHRDVVYFRPADLERPIGINIL
                     QNVHPDHVQLVAQGIVGAFKSVWRDSWGPRMERILYNAVAALLEQRTATLLGVLRLLV
                     DDAYRKRIIPQITDPVIRVFWEVEYPDYQKQFKQEAISPIQNKVERFLSNFVMRNIFG
                     QKKSAIDFFDLMNSKNIFIVNLAKGEIGETNCNLAGSLIINQFYLAALQRITLPEEAR
                     TLFPLYVDEIHSFATESFGNIIEEARKFGLSLCPAHQFLDQLKTVDETLRSAVLTSGT
                     LIAFRVGGEDAGVLRKEFAPWPAEALSDLHNTQAMIKLLQHGKVREPFVIQTYETPPH
                     ITLRNGQAKRVVNFSRDNYGTPRALVEAEISRWMQG"
BASE COUNT          405 a          469 c          495 g          382 t
ORIGIN      
        1 ccctgcatcc aacgcgaaat ttcggcttcg accagcgccc tcggggtacc gtaattatcg
       61 cgtgaaaaat tgaccaccct ttttgcctgg ccgttgcgga gggtaatatg cgggggtgtt
      121 tcgtaggttt gtataacaaa cggctctctc accttcccgt gttggagaag cttgatcatt
      181 gcctgtgtgt tatggaggtc agacagtgct tcggcaggcc agggggcaaa ttccttgcga
      241 agcacaccgg catcctcgcc gccgacccga aacgcaatga gcgttccgga cgtcaacacc
      301 gcactccgca gcgtttcatc cacggttttg agctggtcga gaaactgatg cgcggggcag
      361 agggagaggc caaacttccg ggcttcttca atgatgtttc caaatgattc cgtggcaaag
      421 gagtgaattt catccacgta cagcggaaag agggtccggg cctcttccgg caacgtgatg
      481 cgctgtaagg ccgcgagata aaactggttg ataatgagcg agccggcaag gttgcaattc
      541 gtctcgccga tctcaccttt ggcgaggttg acaataaaga tattcttgct gttcatgagg
      601 tcgaaaaagt cgatggcgct cttcttctga ccaaagatat tgcgcatgac aaagttcgag
      661 agaaaccgct caaccttatt ttggatgggt gagatggctt cctgcttgaa ttgcttttga
      721 tagtcaggat actcgacctc ccaaaagacg cgtatcaccg gatcggtgat ctggggaatg
      781 atccgcttgc ggtacgcgtc gtctaccagc aggcgaagaa ccccgaggag tgtggcggtt
      841 cgctgctcca gcaacgcggc aaccgcattg tagagaatgc gctccatccg ggggccccag
      901 gagtcccgcc acacgctctt gaatgcgccc acaatgcctt gcgccacgag ctgcacatgg
      961 tcaggatgaa cattctgaag aatattgatc cctatcggcc gctccaaatc cgcgggccga
     1021 aagtacacca cgtcgcgatg acggtaggag gggataaggt caaggatgcg ctcagccgag
     1081 gtgccgtggg gatcgataaa tgcggccccg ccgccagcat acacgtcttg caggaaaaga
     1141 ttttccatca gccgcgactt cccggccccc ggccggccga tgatatacaa atgccggcgc
     1201 cgatcatcgt cggtggtggc tataggggtg ccccatacgt ggtgagtgcc aaaatatatg
     1261 aaatgagatt cgtcgcggtt cataggttca aaaccagtcc ctcgtccacg tgaaaaattg
     1321 agctgtcgcc tcccgcaagc tcaattggga agcgtcgttc tcacgacacg tattttgtac
     1381 ttcgtaacat ttgtcctaac cattacgaat ttttcgtgtg aaccggccca gagccggtga
     1441 gaaggagaga ccggttttaa aatgaacacg gggaaacagc gtaactgttt ccccgtgtcc
     1501 ccattatatg cccgcgtgtg gctttcgagc gtgtggacaa ctccacggat ggtgaacgtt
     1561 cgctgcttgg tgcctccgcc ctacaaacgg cggaaaaggt tccggcgaag ccggagcaat
     1621 tgagtcatgg ccgcgaagga gcggctccgt caccttcggg tgcgaatgca ggcctgccct
     1681 tcgatcaatg aacaagtgaa gagccagaga agagcaagta ccccgaacct cggtgccgat
     1741 ttgtccaagc a
//
LOCUS       DASQSL010001093         1025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_129677, whole genome shotgun sequence.
ACCESSION   DASQSL010001093 DASQSL010000000
VERSION     DASQSL010001093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129677"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..903
                     /locus_tag="VE844_11340"
     CDS             <1..903
                     /locus_tag="VE844_11340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003329267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SEC-C metal-binding domain-containing protein"
                     /protein_id="HZC01920.1"
                     /translation="EGDWIWICLVALWQRWFPDKPSFEMLDDKMQAGYDRMAAEGPIA
                     ACRIWLDAWTDVLRLLDKADIQSIDEFDNRFRGTQSLFNWIQELEDALWNAGLEDREF
                     LNARISVCEEGLRRFEMDDDLMTENRRRALAESYFELGETGKAEALYREWLKTDPRWG
                     WGWIGWSDCYRFRFARPELRDLNRSEQLLLEGLSVSEVRDFKDLAERLADLYEEQGRG
                     EEAQGIRRRVRGSLPAIQHTLEVGSGDNVLRQDEELSLSELPNVSARLRVSSPQVATS
                     RQKVGRNDPCPCGSGKKFKKCCGG"
BASE COUNT          234 a          248 c          333 g          210 t
ORIGIN      
        1 gaaggcgatt ggatctggat ttgtttggtg gccctatggc agcgctggtt cccagacaaa
       61 ccttctttcg agatgctgga cgacaaaatg caggccggtt atgaccggat ggcggctgag
      121 ggtcccatag ctgcttgccg catctggctc gacgcctgga ccgacgtgct acgccttctc
      181 gataaagcgg acatccagtc gatcgacgag tttgacaacc ggttcagggg gacccagtct
      241 ctgttcaatt ggatccagga gctggaagac gcgttgtgga acgcagggct tgaggacagg
      301 gaattcctta acgcgaggat cagcgtttgc gaagagggcc tgaggaggtt tgaaatggat
      361 gatgacctta tgaccgaaaa ccgtcgtcgt gctctggcgg aatcctattt tgagctgggc
      421 gagaccggca aggccgaggc gctttatcgc gagtggttga aaaccgatcc acggtgggga
      481 tggggctgga tcggctggtc ggattgctac cgattccgat tcgcgcgccc agaattgcgg
      541 gacttgaacc gatccgaaca actcctgctc gaggggcttt ccgtcagcga ggtgagggat
      601 ttcaaagatc tcgctgaacg gcttgcggat ctctatgaag agcagggacg aggggaggaa
      661 gcacagggga tccggcggcg ggtgagaggg agcctccctg ctattcagca cacgctggaa
      721 gtcgggtcag gagacaatgt cctgcgccaa gacgaggagc tgtcgctcag cgaactgccg
      781 aatgtttcag cccgtctgcg agtgtcctcc ccacaggtcg ccaccagcag acagaaagtc
      841 gggcggaacg acccatgccc gtgcgggagc gggaagaagt tcaagaagtg ctgcggaggg
      901 tagattgaac tgtgtagtcg gctgccctta ctttgcccct ggtgacacga atgtttttgc
      961 agggccagtt atgcttaaaa aatcatagaa tagcaaacta aacaaactga taggtggtaa
     1021 gacca
//
LOCUS       DASQSL010001094         1869 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_76561, whole genome shotgun sequence.
ACCESSION   DASQSL010001094 DASQSL010000000
VERSION     DASQSL010001094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1869
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76561"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..133
                     /locus_tag="VE844_11345"
                     /pseudo
     CDS             1..133
                     /locus_tag="VE844_11345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612229.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            371..1663
                     /locus_tag="VE844_11350"
     CDS             371..1663
                     /locus_tag="VE844_11350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017842155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISNCY family transposase"
                     /protein_id="HZC01921.1"
                     /translation="MTFETFTDRRRGKNTRYTLVDAALSAFSVFFMQSPSFLEHQRTM
                     QDTQGKDNAQTLFGVHQIPTDNHIRSLLDAVDPAQVYSMFPYIFKGLQQAGVVDSYRA
                     VSHSVVLTLDGTRYFSSQKIHCPYCSTQHHANGSVTYFHSVLTPVVVKPGCDKVIPLA
                     PEFVRPQDGQTKQDCELNAAKRWLGRWGSEYASLGVTVLGDDLYCHEPFCREALAQGF
                     EFILVCKPESHPLLYEWVESLDRGGSVKTLVRKRWTGKRYEIDTYRYVGAVPLRDGDD
                     ALVVNWCELTTTTADGQVVYHNAFATSHAVEQTNVVEMVAAGRSRWKIENENNNTLKT
                     KGYHFEHNYGHGQQFLSSLLATLILLAYGLHTLLEWMDDKYQVLRQKLPSRQRLFNDI
                     RALTTYLCFDSWDALLVFMLSGFSHPPLNPRPARAPPK"
BASE COUNT          413 a          517 c          530 g          409 t
ORIGIN      
        1 tgccagcctc gaggaggcgc gcctctggat gcagcagttc gtaggcggct acaacgacga
       61 ccaccgccac agcggcattc gcttcgtcac gccccagcag cgccacagcg gccaggatca
      121 agccatcctg gcccaagtcg agcttgaggc cggggcgggc ttacccgatt ttgtcagaga
      181 ggagttcgat gcctttctcg aatgcggtat tttagcccac ggttttctac gcctgcgttg
      241 cgccagcaat tctcattttg gctttgagaa gctagagtag gtaaggtcta acaacccgat
      301 aggtacttcc atgagcgttc cctttggttc caatatactg accttcagcg cagttgcgaa
      361 gcaactgcgc atgacctttg aaacatttac cgaccgacga cggggaaaga atacccgcta
      421 cacgctggtg gatgcggcgc taagtgcgtt ctcggtgttt ttcatgcaaa gtccgtcgtt
      481 tttggaacat cagcggacga tgcaggacac gcaggggaaa gacaatgccc agacgctgtt
      541 cggggtgcat cagatcccga cggacaatca tatccgctca ttactcgatg ccgtggaccc
      601 cgcccaggtg tattcgatgt ttccctatat attcaagggc ttgcagcagg ctggggtagt
      661 agattcctac cgcgcggtga gccacagcgt ggtgctcacg ctggacggaa cccgctactt
      721 ttcctcgcag aagattcatt gcccgtactg ctcgacccag catcatgcca acggctcggt
      781 gacgtatttc cactcggtgc tgacgccggt tgtggtcaag cccggttgtg acaaagtgat
      841 cccgctggcc ccggaattcg tgcggcccca ggatggccag acgaagcaag actgtgagct
      901 caacgcggcc aagcgttggc tgggacgctg gggaagtgag tacgcttcct tgggtgtgac
      961 cgtgctcggc gatgacctgt actgccatga acccttctgc cgggaggcgt tggctcaggg
     1021 gtttgaattc attctggtct gcaaaccgga gtcccatccg ctgctgtatg agtgggtcga
     1081 gtccctggat cgtggtggca gcgttaaaac cctggtccgt aaacggtgga ccggcaaacg
     1141 ctacgagatc gacacctatc ggtacgtcgg tgcggtaccg ttgcgggacg gagacgacgc
     1201 cttggtggtg aactggtgtg agctcacaac caccacagca gacggtcaag tggtgtacca
     1261 caatgcgttt gccacctcgc acgcggtgga gcagaccaac gtcgtggaga tggttgccgc
     1321 cgggcgcagc cggtggaaga ttgaaaacga gaacaacaac accctgaaaa ccaaaggcta
     1381 tcacttcgag cataactacg gtcacggcca acagtttctc tcgtctttgt tagccaccct
     1441 catcttgctc gcctatgggc tgcatacgct gctcgagtgg atggatgaca agtatcaggt
     1501 actccgccag aaactgcctt cacgccagcg cctgttcaat gacatccgcg cgctaaccac
     1561 ctatttatgc ttcgacagtt gggacgcgct gctcgttttc atgctgagcg gcttctcaca
     1621 ccctccccta aacccaagac cggctagggc tccgccaaaa tgagaattgc tgggagtgcg
     1681 tcaaacgcct tgaaatactt cagcgtagtg ataatgtaac tggcttcggt ggtaaggcat
     1741 tgatttcaga tcggctgaga ttggggatca aactagcaga cggcgcaagt tattgattaa
     1801 aaagaagtcg acgataactg gtcgcacaca ggcttggagg acaagcagga caacacattt
     1861 tgcatcact
//
LOCUS       DASQSL010001095         1546 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_76564, whole genome shotgun sequence.
ACCESSION   DASQSL010001095 DASQSL010000000
VERSION     DASQSL010001095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1546
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76564"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..470)
                     /locus_tag="VE844_11355"
     CDS             complement(<1..470)
                     /locus_tag="VE844_11355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013953541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HZC01922.1"
                     /translation="MSDPREHANTPAATSEGITRRAFLQHALAAGAALVGGTCAMNTL
                     NPQAQGGNRADLILTNGRITTLDAAKPSVTAVAIKDGRFLAVGSDQDILSYRGVNTQV
                     IDVNKRTAIPGLHDSHLHVIRGGLNYNLELRWDGVPSLTDALRMLREQAQRTPPP"
     gene            complement(589..1221)
                     /gene="ycaC"
                     /locus_tag="VE844_11360"
     CDS             complement(589..1221)
                     /gene="ycaC"
                     /locus_tag="VE844_11360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018141603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate family cysteine hydrolase YcaC"
                     /protein_id="HZC01923.1"
                     /translation="MNTAYKYNRLSKDDAVVLLVDHQSGLISLVQDFSPSEFKNNVLA
                     VAACGKYFKLPTILTTSFENGPNGPLVPELKEMFPNAPYIARPGNINAWDNEDFVKAI
                     KKTGRKQLIIAGVVTEVCVAFPALSAIEEGYDVFVITDASGTFNEVTRHSAWLRMQAA
                     GAQLMNWFGMACELHRDWRNDIEGLGTLFSNHIPNYRNLMTSYFTKKEIT"
     gene            complement(1336..1542)
                     /locus_tag="VE844_11365"
                     /pseudo
     CDS             complement(1336..1542)
                     /locus_tag="VE844_11365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013567763.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
BASE COUNT          317 a          427 c          451 g          351 t
ORIGIN      
        1 ggcggcggcg tgcgttgggc ctgctcgcgc agcatgcgta gcgcgtcggt gagcgagggg
       61 acgccgtccc agcgtaactc caggttgtag ttgaggccac cgcggatgac gtgcagatgc
      121 gaatcgtgga gccccgggat cgcggtacgc ttgttgacat cgatgacctg cgtattgaca
      181 ccacggtagc tcagtatgtc ttggtcacta ccaaccgcca gaaaccgccc gtccttgatc
      241 gccaccgcag tgacgctagg tttggcagca tccaaggtgg tgatgcggcc attggtgagg
      301 ataagatcgg cccgattacc gccctgggcc tgtgggttaa gggtattcat agcgcaagta
      361 cctccgacta acgcagcacc cgctgcgagc gcgtgctgta aaaaggcccg ccgcgtgatc
      421 ccctctgatg tcgcggcggg tgtattagca tgttcacgag gatccgacat cgctcacctc
      481 ctggtttggt gtgtgggcgt accgccgagc ttcaccgccg ctccccgaca gcgcctttgc
      541 tgcgggatca gtagcatgac tgcatcgtcg ggattgatcc cacttaactc atgtgatctc
      601 cttcttagtg aagtagctcg tcatgaggtt tcggtagttc ggaatgtggt tcgagaagag
      661 cgtgcccaga ccttcaatgt cgttgcgcca gtcgcggtgc agctcgcagg ccatgccaaa
      721 ccagttcatc agttgcgcgc cggcagcctg catccgcaac caggcgctgt ggcgggtaac
      781 ctcattgaag gtgcccgagg cgtcggtgat cacgaaaacg tcgtatccct cctcaatggc
      841 ggaaagcgca gggaaggcca cgcagacctc agtaactacg ccggcaatga tgagctgctt
      901 gcggccagtc ttcttgatcg ctttgacgaa gtcctcgtta tcccaggcgt taatgttccc
      961 aggacgcgca atgtagggcg cgttcgggaa catctccttc aattccggca ccagcggccc
     1021 gttcgggccg ttctcgaaac tcgtggtcag aatcgtgggt agcttgaagt acttgccgca
     1081 ggccgccacc gcaaggacgt tgttcttgaa ctcgctgggc gaaaagtcct gaaccaatga
     1141 aatcaggcca gattggtgat ccacaagaag gacgacagcg tcatctttgg aaagtcggtt
     1201 gtatttgtat gcagtgttca tagatagact cctttgtaat cctctctagc ggagagaggg
     1261 ctagagcatg tttaaaaata gcatcggcgt gttctgtcat agcgctatct ctagacatta
     1321 tcgggtttaa gcatcgctga cgccagcgtt ttcggccaga cgacgcgcca ctaccgaccc
     1381 ggaagtaccc gatccgcaga cgataaagtc gtaatgagac tttagttcag aactaagctt
     1441 ccgctgattg aggcgaacgc gttcggcaaa ctctgccgcg gcggcgtctg atccagaatg
     1501 tgcgtcgcct gagttttcct taccgacatt aatgtatggc attttt
//
LOCUS       DASQSL010001096         1150 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_9088, whole genome shotgun sequence.
ACCESSION   DASQSL010001096 DASQSL010000000
VERSION     DASQSL010001096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9088"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1150)
                     /gene="glyS"
                     /locus_tag="VE844_11370"
     CDS             complement(<1..>1150)
                     /gene="glyS"
                     /locus_tag="VE844_11370"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008930882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009345 - glycine-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HZC01924.1"
                     /translation="ALGFARSCGVAVEALERLETDNRSWLAFRSAEIGQTAQALIPGL
                     VTETLIALPIPKRMRWGTGEAEFVRPIQWVVLLFGSELIEAEILGVRSDRLTYGHRFH
                     HRAPLPLVDPARSYVPLLEGQGFVLPEFERRRALIREQVEQAAKEVDGIAVIEPDLLD
                     EVTALVEWPAIISGTFDPKFLTMPPEVLIATMRDQQRYFHLLDEAGRLLPKFIGVTNI
                     ESRHPETIRRGNERVIKPRLTDAAFFWDQDRRKPLSERLDALREVIFQKSLGTLHDKS
                     LRLAFLARAIARQIQGNPDDAERAGLLSKCDLLTHLVGEFPELQGIMGRYYAAHDGES
                     QEVAAALDEHYLPRKAFDRLPETRTGQALALADKLDTLVGIFGIGQVPS"
BASE COUNT          252 a          339 c          337 g          222 t
ORIGIN      
        1 cgctcggcac ctgcccgatc ccgaagatcc caaccaaggt atcgagctta tcggcgaggg
       61 cgagtgcttg gccggtcctt gtttcgggca ggcgatcgaa ggctttgcga ggcagatagt
      121 gttcatcgag ggcggcagcc acctcttgag actccccgtc atgggcggca tagtagcgtc
      181 ccatgatccc ctggagttct ggaaattcac ctaccagatg ggttaaaaga tcacatttgg
      241 acagcaggcc agcccgctcc gcatcgtcag gatttccctg gatttggcgc gcgatcgctc
      301 gcgccaggaa ggcgagccgg agggatttat catggagcgt gcccaggctc ttttgaaaga
      361 tcacctcgcg cagagcgtcg aggcgctcag agaggggctt acggcggtct tgatcccaaa
      421 agaaggcggc atcggtgagc cgcggtttga taacccgttc attaccacgc cggatggtct
      481 caggatgacg gctctcgata ttggtcacgc ctataaactt gggaagcaag cggccggcct
      541 catcaagcag atggaaatac cgctgttggt ctcgcatagt ggcgatgagg acctcggggg
      601 gcatagtgag aaacttggga tcaaaggtcc ccgagatgat agcgggccac tccactaaag
      661 cggttacttc atccagcaga tccggctcga tcacagcgat accgtcgacc tcttttgccg
      721 cttgttcgac ctgttcacgg atcaaggctc gccgtcgttc gaactcagga agaacaaagc
      781 cttgtccctc cagcaggggg acatagctcc tcgcgggatc caccaagggc agaggggccc
      841 gatgatgaaa gcgatggcca taggtcaaac gatcagatcg gacgccaagg atctcggcct
      901 cgatcagctc ggatccgaac aagagcacga cccactgtat aggccggaca aattctgcct
      961 cgcctgtccc ccagcgcatg cgtttaggga tgggtagcgc tatcagcgtc tccgtcacca
     1021 gccctgggat aagcgcctgc gccgtctggc ctatttcagc ggaacgaaat gcaagccagc
     1081 ttctattatc ggtttcaagc cgctccagcg cctccaccgc aacgccacac gagcgcgcaa
     1141 acccgagggc
//
LOCUS       DASQSL010001097         1186 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_113895, whole genome shotgun sequence.
ACCESSION   DASQSL010001097 DASQSL010000000
VERSION     DASQSL010001097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1186
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113895"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..156
                     /locus_tag="VE844_11375"
     CDS             <1..156
                     /locus_tag="VE844_11375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005314162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HZC01925.1"
                     /translation="VGASIGIGLTIFKSRDKDQPIPFGPYLACAGWIALLWGDAITDL
                     YLQTLSQ"
     gene            153..752
                     /gene="coaE"
                     /locus_tag="VE844_11380"
     CDS             153..752
                     /gene="coaE"
                     /locus_tag="VE844_11380"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812172.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HZC01926.1"
                     /translation="MTPLIGLTGGIGTGKSTVCKLFAERGVAVIDADAVAKELVALDQ
                     PALQAIVQEFGKGIIDAKGRLRRDRLRSIVFSDPERRKRLEKLLHPLILEEMLNRANR
                     AGGPYCILCIPLLVETDQSSAVDRVLVVDAPQALQIQRVMERDHLTIDEIKAIMHAQA
                     SREDRLEAADDVIMNASDMTKLAEQVNALHQKYLALPTR"
     gene            769..>1186
                     /gene="zapD"
                     /locus_tag="VE844_11385"
     CDS             769..>1186
                     /gene="zapD"
                     /locus_tag="VE844_11385"
                     /inference="COORDINATES: protein motif:HMM:NF018740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapD"
                     /protein_id="HZC01927.1"
                     /translation="MIVTPLIPSGNRDLLPYRADNRLTYEQPLNERIRGFLRLEYLFE
                     NISARICGLSVWDSRAALAGLIDVLDLLSRCEFKGELIKELERYEAIFARLRPHPGVD
                     LRRLNETLGHLDTLSTALKDHAYQPGQTLRQDELVNA"
BASE COUNT          270 a          300 c          332 g          284 t
ORIGIN      
        1 gtgggtgcaa gcataggtat tggattaacg atctttaagt cgcgggataa agaccagcct
       61 atcccctttg gaccttatct tgcctgtgca ggctggatcg cgctgctttg gggtgacgct
      121 atcaccgatc tttatctgca gaccctcagc caatgacccc cttgatcggt ttgaccggtg
      181 ggatcggcac gggcaaatct actgtgtgta agctctttgc agagcggggt gtagctgtta
      241 tcgatgccga tgcggtcgcg aaagagcttg tggcgctcga ccaaccggcc cttcaggcta
      301 tcgtacaaga atttggcaag ggcatcatcg atgctaaagg cagattgcgt cgtgaccggc
      361 tgcgatctat cgtttttagt gatccagagc ggcgaaagcg gctggaaaag ctcttacatc
      421 cgctgatcct cgaggagatg ctgaaccgcg cgaacagggc aggagggccc tattgtatac
      481 tgtgcatacc gttgttggta gagacggatc aatccagcgc agtcgatcga gtcctcgttg
      541 tcgatgcgcc tcaagcatta caaatccaac gggtgatgga gcgcgaccat ttgacaatcg
      601 atgagattaa ggcaatcatg catgcccagg cttcccgcga agaccggctt gaagcggccg
      661 atgatgtgat tatgaacgct tcggacatga ccaaacttgc cgagcaagtt aatgccctgc
      721 atcagaaata cttagcactt ccaacacgct gaatcctgca acggggaaat gatcgttacg
      781 cccttgatcc cctcaggtaa ccgagatctc ttgccctatc gggcggataa cagactcacc
      841 tatgagcagc cgctcaatga gcggatccga ggattcctgc gcctcgaata cctgtttgag
      901 aatatctccg ctaggatttg tggactatcg gtgtgggata gccgtgctgc gctcgctgga
      961 ctgattgatg tgcttgacct tctgtctcgc tgcgagttca aaggtgagct gattaaagag
     1021 ttggagcgct atgaggcgat atttgcgcgt ttacggccgc acccgggcgt tgatctgagg
     1081 cgtcttaacg agaccttagg acacttggat accctatcaa ccgctttgaa agatcacgcc
     1141 tatcagcctg gtcagacgtt gcgccaggac gaattggtga atgcca
//
LOCUS       DASQSL010001098         2667 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_186131, whole genome shotgun sequence.
ACCESSION   DASQSL010001098 DASQSL010000000
VERSION     DASQSL010001098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2667
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186131"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(71..982)
                     /gene="asd"
                     /locus_tag="VE844_11390"
     CDS             complement(71..982)
                     /gene="asd"
                     /locus_tag="VE844_11390"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004998919.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="archaetidylserine decarboxylase"
                     /protein_id="HZC01928.1"
                     /translation="MEQSSSTLADYLKTLPQYLMPHHLLSRLMFAVTRIRFPPWKSRL
                     IRWFIRHYGVDMTSAEESDPTQYPDFNSFFTRALRAGVRPVAGDPAAIACPVDGAVSQ
                     MGDIRNGYLYQAKGQEYSLSQLLAGDPRLGDMFIGGSFITLYLSPKDYHRAHLPLDGR
                     LIKIVYVPGRLFAVNTPATRVVSSLFARNERLINLFETEAGPMALIMVGAIFVGSMET
                     VWAGTVTPSSSRAIQTWCYEHENPGAIYFSKGAEIGRFNMGSTVIVLFGPASVHWLPD
                     LHAGIKVKMGQSIGIVKRRIAIHYGKI"
     gene            complement(1031..2338)
                     /locus_tag="VE844_11395"
     CDS             complement(1031..2338)
                     /locus_tag="VE844_11395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011379721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HZC01929.1"
                     /translation="MPIERPVRLPNLGDFKEIDVIEVLVKPGDQVKAEDPLITLESDK
                     ATMELPSPYAGAVKELKVKVGDKVAEGDLLLVLEETMTDESKAESKEAPETREQAPAQ
                     LPKEPPVATPREEIGPRPPPPPLQTAETVRGSRSAKAHASPAVRHLARELGVDLGLVT
                     GTGPKGRILKEDVKAFTRQMMAGAPIQGSPFLVTTVPSIDFSKFGKTELKPLNKLKRI
                     AGQNLQRSWITIPHVTHFEEADITDLETFRQAKLKDAAENKIKLTLLSFLLKATVVAL
                     KKYPEFNASLTTDGESLVLKKYFHVGVAVNTENGLIVPVIRDVDQKGLFQLAAEILAL
                     STKARAGKLEPRELQGGCFTISNLGGIGGIGFTPIINFPEVAILGVSRAYTKPVFQGE
                     GFKPRLIAPLSLSYDHRVIDGVAAAQFSRFLSEVLSDIRQILL"
     gene            complement(2375..>2667)
                     /gene="aceE"
                     /locus_tag="VE844_11400"
     CDS             complement(2375..>2667)
                     /gene="aceE"
                     /locus_tag="VE844_11400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004178176.1"
                     /note="E1 component; part of pyruvate dehydrogenase; forms
                     a complex with DlaT and LpdC; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HZC01930.1"
                     /translation="RDHKGPVVAATDYMKVYADQICPFIPNRPYLVLGTDGYGRSDTR
                     AKLRRFFEVDRYYIAVAALKALADEGRIKPAQVTEAIKKYGLDPEKPDPATV"
BASE COUNT          587 a          716 c          754 g          610 t
ORIGIN      
        1 caacgatcta tcggcggggc caagcggtgg aagcagaacc tgcggtaccc ggatggcgga
       61 tgcctgtaga tcaaatcttt ccatagtgaa tagcaattcg ccttttgact attcctatac
      121 tttgccccat ttttacctta ataccggcgt gcagatccgg caaccagtga acactcgccg
      181 ggccgaacaa cacgatcacg gttgatccca tattaaagcg gcctatctct gcaccttttg
      241 agaagtagat agcgcctgga ttttcatgct cataacacca ggtttggatg gcgcggctgc
      301 tcgaaggggt gactgtccca gcccagacgg tttccatgct gcccacaaag atggcgccta
      361 ccatgatcaa tgccatcgga ccggcttccg tttcgaacag attgatcaga cgctcgttgc
      421 gggcgaagag gctggaaaca acgcgcgtgg cgggtgtgtt gacagcaaag agacggccgg
      481 gcacgtagac tattttaatc aatcttccat cgaggggcag gtgggcacga tgatagtctt
      541 tgggtgacaa atagagggta ataaagcttc cgccgatgaa catatccccc aatcgcggat
      601 cgccggctag aagttgcgat aaggaatact cctgaccttt ggcttggtat aagtatccat
      661 tccggatgtc gcccatttgg cttaccgctc catccaccgg gcaagcgatt gctgccggat
      721 ctcctgccac cggtcgaacg cccgcacgta aagcgcgggt aaaaaagctg ttgaagtctg
      781 gatactgggt cggatcggac tcttctgcgc tagtcatgtc tacgccataa tgccggataa
      841 accatcgaat caatcggctc ttccaaggtg ggaagcggat gcgtgtaacc gcgaacatca
      901 gccgagataa aagatgatga ggcattagat attgcgggag ggttttcaga tagtcggcaa
      961 gggtgctgga cgattgttcc attttcgtga agggtgaggg gtaaagggta aggagtgagg
     1021 agtgaggaga tcacaatagg atctggcgta tgtctgataa tacctcgctc aagaaccggc
     1081 taaactgggc tgcggctaca ccgtcgatga cgcggtggtc ataggacagg gacaacggcg
     1141 ctataagcct cggtttgaag ccttctccct ggaacacggg cttggtatac gcccgtgata
     1201 ccccgaggat agccacctcg ggaaagttta tgatcggtgt aaagcctatc ccgccgattc
     1261 cacccaggtt ggagatggta aagcagccgc cttgcagctc gcggggttcc aatttcccgg
     1321 cgcgcgcctt ggtgctgagc gccaagatct cagcggcgag ctggaacagc cccttttgat
     1381 cgacatcccg gatcaccggg acaatgagcc cattctccgt attaaccgcg actcctacgt
     1441 gaaaatactt cttcaacacc aagctttctc catcggtggt gagcgaggca ttaaactcgg
     1501 ggtatttttt cagagcaacc acggtggcct tcaataaaaa ggatagcagt gtcaatttga
     1561 tcttattctc ggcagcgtct ttgagcttgg cttggcggaa ggtctcaaga tctgtgatat
     1621 cggcttcttc gaaatgagtc acgtgaggga tcgtgatcca actccgctgc agattttgac
     1681 cggcaatgcg ttttagtttg ttgagtggct tcagctcggt cttgccgaat ttagagaaat
     1741 cgatcgacgg cacggtagtg acaagaaacg ggctaccctg gatcggtgcc ccggccatca
     1801 tctgtcgggt aaacgccttc acgtcctcct taaggatgcg ccctttgggc cccgtacccg
     1861 tcaccagacc cagatccacg cccaattcac gagccaggtg ccggaccgcg gggctcgcgt
     1921 gcgccttggc tgaacggctg ccgcggaccg tctcggcggt ctgtagcggg ggtggcggcg
     1981 gccggggtcc tatctcctca cgcggggtag ccacaggggg ctctttggga agctgggctg
     2041 gtgcttgctc ccgggtctcg ggcgcttcct tggactcggc tttggattcg tcagtcatag
     2101 tctcttccag gaccaggagc aaatcccctt cagcgacctt atcccccacc ttgaccttga
     2161 gctccttgac agcaccggca taaggggagg gaagctccat agtcgccttg tcgctctcca
     2221 gggtaatcaa cggatcttcc gccttgacct gatcgccggg cttcaccagg acctcgatca
     2281 cgtcgatctc tttgaaatca ccgaggttag ggagccggac tggacgttca ataggcatgg
     2341 ttagcagggg atgatcggtc tttgacttga ccggttacac cgttgccgga tccggctttt
     2401 ctggatcgag accgtatttt ttaatagcct cggtgacttg tgcaggcttg atacggccct
     2461 catcggccag cgccttgaga gccgcaacgg caatgtaata acggtccacc tcgaaaaatc
     2521 gccgcagttt agcgcgcgta tcgctgcgcc cgtaaccgtc cgtgcctaag acgagataag
     2581 gcctgttggg aataaacggg cagatctgat cggcatatac cttcatatag tcagtagcag
     2641 cgacaaccgg acccttatga tcccgga
//
LOCUS       DASQSL010001099         1099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_61245, whole genome shotgun sequence.
ACCESSION   DASQSL010001099 DASQSL010000000
VERSION     DASQSL010001099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61245"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..852
                     /gene="dinB"
                     /locus_tag="VE844_11405"
     CDS             <1..852
                     /gene="dinB"
                     /locus_tag="VE844_11405"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF002677.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HZC01931.1"
                     /translation="APRFDHYRQISQHIRNILLQYTDLVEPLSLDEAYLDVTVNKKGM
                     PSATHIAQAIRAQIRRETQLTASAGVSINKFLAKIASDLNKPDGLALIGPNEAEAFLE
                     RLRIEDFHGIGPQTAQKMKALGIHLGVDLKTWAEPDLVQHFGKVGRHFFRIVRGIDER
                     DVQPDRVRKSVGAETTFRQDLTSEEDMLAALRTLTDQVCEHLRRLKTAAMTVTVKMKY
                     HDFVQVTRSKTFSEPQQEAHEVFPAVAYLLHHPIPPARPVRLLGISLSNLTPEAGNLP
                     RQLTLPW"
BASE COUNT          244 a          341 c          305 g          209 t
ORIGIN      
        1 gccccgcgct tcgatcacta ccgccagatt tctcagcaca tccgaaacat cctgttgcag
       61 tacactgacc tggtggagcc cctctccctt gatgaagcct acctcgatgt cacggttaac
      121 aaaaaaggca tgccctcggc cacgcacatt gcccaggcca ttcgggcaca aatccgacgg
      181 gagacacagc tcacggcatc ggccggggtg tctatcaaca aattcttggc caagatcgcc
      241 tccgacctca acaagcccga cggtctggcg ctgattggac ctaatgaagc cgaggccttt
      301 ctcgagcggc ttcgcatcga ggactttcat ggcatcgggc cccagacggc gcagaagatg
      361 aaagccctgg gcattcactt gggcgtcgac ctcaagacct gggcggagcc ggacctggtg
      421 caacactttg gcaaggtggg ccgccacttc ttccgcatcg tgcgcggtat tgacgagcgc
      481 gacgtgcagc ccgatcgggt gcgcaaatcg gtcggggccg agaccacgtt tcgccaggac
      541 ctcacgagcg aagaggacat gctcgccgcc ctgcgcaccc tcacggacca ggtctgcgag
      601 cacctgcgcc gcctgaagac cgcggccatg actgtgacgg tgaagatgaa gtaccacgat
      661 ttcgtccagg tgacgcgcag caagactttc agtgagcctc aacaagaggc acacgaggtg
      721 tttccagccg tggcctacct gctgcaccat ccgataccgc ccgcgcggcc cgtgcggctt
      781 ctaggcattt ccctctccaa cctcacgcct gaggcaggca acttaccccg tcagttaaca
      841 ctaccctggt agatgtacag gtaagccgaa aaacgcaagg gaacgggtat ggcggacgcc
      901 tcatccaagc gtttcagttg atccagtctt caactcgcag atgaggaagg cgcttaaaat
      961 ctagaggttg gcggaaagca gaagggcacc ctggacaact tatgttcaag tggacttgac
     1021 cagatgaaac tggctcttcc gcaggtttcg tgcagggtac ctagctgcct ctgtgctggg
     1081 tatactctca tgtgatcaa
//
LOCUS       DASQSL010001100         1769 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_33217, whole genome shotgun sequence.
ACCESSION   DASQSL010001100 DASQSL010000000
VERSION     DASQSL010001100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1769
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33217"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            806..1372
                     /locus_tag="VE844_11410"
     CDS             806..1372
                     /locus_tag="VE844_11410"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01932.1"
                     /translation="MRHKTPAHIARLLLARLIRWFPERQFNFVGDTGYGPSETARCCR
                     QHRRHLTLISKFYGDAALYEPPPPRTRTTLGRPRVKGRKLRSPQEVVAQTIQRSCLTV
                     AWYGGATRNIEVVTGTGHWYRIGEALIEVRWVYVHDCTGTHRDEYFFTPDVTLHPQQS
                     VEGYTPRWSIETTFQECREYLKRESTTG"
BASE COUNT          354 a          541 c          482 g          392 t
ORIGIN      
        1 aaggctgaca ggtgatacac gtcttcggtg cattggtctg gaggcgtgtc gaagcaatca
       61 acatactgcc gggcataggt ccgtaggggt cctacttcag atggtttgag cccaccttca
      121 cgcaccacat attcaaccag gtcgttccac agcattgaca accctccata gtacttagct
      181 cgactttggc cctttttaag ggctaagcgc ggtaagaggg taggcaatca cgggctttca
      241 tggtgaaata gtcgcaatcg tctttctcca caggacacca ctacccatgg aagcgccttc
      301 gacatgaaca ttccagattt tgcgttaccc gtactgacgg ggcttcggcc cacattttcc
      361 actccgacct acaaccgatt cctcgtgctc ctgcttggcg cactgctaac gacgggacga
      421 cggaccatca ccaatgtact gcacgccgtc cggcatcaga caccaggcca tgcatcttcc
      481 tatcatcgcg tgttttcgca gcgcccctgg tcgccttggg tgctggcgcg agggttgatg
      541 acgtttctgc tggcccatgt cgtcccgacc ggccctgtat tcctggctgg cgatgatacg
      601 gtcgccgagc gccccggtcc gaaggtattt ggtaaaggtc gccatcgcga tggagtccgg
      661 tcaacccaca gctataccgc ctatcgctgg ggacataagt ggggcgtcgt gtcggtgctc
      721 gtgaagttcc cgtttgcgac acggccctgg gctcttcctg ccttggtcgc cttatcgcgc
      781 cccggaatgg aatcagaccc acgggatgcg ccacaagacg cctgcgcata ttgcgcggct
      841 cctgctcgcc cgcctcatcc gctggttccc agagcgccag ttcaactttg tgggcgacac
      901 cggctatggc cccagtgaga cggcacggtg ttgccgtcaa catcgccgcc atctgacctt
      961 aatcagtaag ttctatggtg atgcggcctt gtacgagcct ccgccaccga gaacgcgtac
     1021 caccctgggg cgcccccggg tcaaaggccg gaaactgcgc tctccccaag aggtggtcgc
     1081 ccagaccatc cagcggtcat gcctcacggt ggcatggtat gggggggcaa ccagaaacat
     1141 tgaggtggtc accggcaccg ggcactggta ccggattggt gaagccctca tcgaagttcg
     1201 atgggtgtat gtccatgatt gtacagggac ccatcgtgac gaatatttct ttactccaga
     1261 tgtcacactg cacccgcaac agagtgtgga gggttacacg ccacgctggt ccattgaaac
     1321 cacgttccag gaatgccgtg aatatctgaa acgggaatct accacgggct agagccagca
     1381 aaccgtcctc cggctcatcc cctgcttatg cgggttatct accatgggag tgcggctcta
     1441 tctgcagctc ccacagtctt tcccatcgcc tggggcggtt tactggacgg gcaaatcgac
     1501 tgtcacgttt tccgatatgc gcacctgtgt acgccgggct ctctggcagc aatggttttt
     1561 tcacacgcat cgcacgggcg aggggtgttc aaaactctcg cgggcattac aagccacact
     1621 tctcaatgcc ctggctcccg cggcatagat ggtaaccagc ctgcaaaggc tgtgggcatc
     1681 atgttcatct gtgcctccca gaacggcaaa agtcgagcta ctccgacccc tcaaaaccag
     1741 ggggttttaa caagagcttt ggcatcgtt
//
LOCUS       DASQSL010001101         4675 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_22901, whole genome shotgun sequence.
ACCESSION   DASQSL010001101 DASQSL010000000
VERSION     DASQSL010001101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4675)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4675)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4675
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22901"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..291)
                     /locus_tag="VE844_11415"
     CDS             complement(<1..291)
                     /locus_tag="VE844_11415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01933.1"
                     /translation="MKKPEHGLLLIWLMLTGGVVFLAVIAGYEGLLTTLVVTDQSKIC
                     VLIGLIYIGATWHSLQRTLYLSNQLNQAAVTEALLTNGLEQRLEIAGNRLRGI"
     gene            complement(288..761)
                     /locus_tag="VE844_11420"
     CDS             complement(288..761)
                     /locus_tag="VE844_11420"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZC01934.1"
                     /translation="MRYHVIALVIALTGIFGCTDPDPEAAFRAGDYETSFKQWLERAE
                     KGDVKAQNYVAIHYHMGLAVKQDHRAAVEWYQRAARAGNADAQRNLGTMYQLGLGVAQ
                     DRLRAYAWYYAAAERGHPKARDYLKLMANQLTPNQIAQAKRLLAEELVDRKAGDS"
     gene            complement(806..3151)
                     /locus_tag="VE844_11425"
     CDS             complement(806..3151)
                     /locus_tag="VE844_11425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015279531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HZC01935.1"
                     /translation="MKRMLINATQPEELRVALVDGQRLYDLYIEATGYEQRKSNIYKG
                     KIVRIEPSLEACFVDYGVERHGFLPLKEVARSLFIESPSGNGRTNIKDVLREGQELVV
                     QVEKDERGNKGAALTTFISLAGRYLVLMPNNPRAGGVSRQIEGVDREEAREAMSTLAI
                     PEGMGLILRTAGLGKNAEELQWDLDYLLHLWQAIAEAAQKRPASFLIYQDRDIIIRAI
                     RDYFRNDIGEILVDDRALYEKGRDFMQQVMPQNLKKLKLYEDRISLFTRFQIENQIEA
                     ALRREVALPSGGLIIVEPTEALTTIDINSARATRGSDIEETALMTNLEATEEIARQSR
                     LRDLGGLIVIDFIDMANPKNQRLVENRLKEALKLDRARVQIGRISRFGLLELSRQRLR
                     PSLTEFSHIVCPRCNGQGAIRSIESLALSVLRVIEEDAMKESTARIIVQLPVEVATFL
                     LNEKRQDVTEIEQRQHVQVLVIPNPHLETPQYEVQRIRQQDHASLAYREMSYKLPTPP
                     EPPEILIETAGKRPIEEPAVKQFAREPIDLEKKPRPGIVRRLFSNLFGEKAEEREIVA
                     PVEDARSPSADKYPPLQRRQPEGQSAQGAQSAVLRKESSISFEPSTLGGSARTGAEEP
                     AIGSEVENKPITEPPAAERVREKDHESSTSSSSSSHARGAKGSRRGRRGGSNGRRRRR
                     TIQNESLAQEGSSTQREPIEKTEEQITESKESTESTGSLYTDPNSLIVPPHPEPSRLL
                     FQEDFHSDAQDMSEAAEKIEPADEEKTPSLPATSTGIEEPA"
     gene            3752..>4675
                     /locus_tag="VE844_11430"
     CDS             3752..>4675
                     /locus_tag="VE844_11430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004718990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HZC01936.1"
                     /translation="MNLPSESMDGCPCTIVPDQAGRRIDNFLIGNLKGVPKSRIYRML
                     RTGEVRVNGGRIRQDYRLKPGDVLRIPPVERRDPSIPPTALAIKRLTSSLLKDDLLYE
                     DEALIVLDKPAGIPVHGGTGFDCGVIEALRALRPHDPYLELAHRLDRDTSGCLLIVKQ
                     PCLLRQIHEMFREGSVIKRYLTLVRGQWQGSGRIIDEGLRKNILRSGERMIQVQTDGK
                     RAQTWMTPIEIFAHGSLMEVKLLTGRTHQIRVHAAYRGHPVAGDAKYGDRSFNARMRR
                     AGLRHMFLHAKSLCFKRPDSKRKLFVEAALPN"
BASE COUNT         1017 a         1335 c         1220 g         1103 t
ORIGIN      
        1 gatgccgcgc agccggttgc cagcgatctc caagcgttgc tccaagccat tggtcagcag
       61 cgcttccgtg acggctgcct ggtttaactg gttcgatagg taaagggtac gttgcaggct
      121 gtgccatgtc gcgcctatat agatcagacc gatgagcaca cagatcttac tctgatcggt
      181 gaccaccaag gtggttaaga ggccctcata gccggcgatg acggccagaa agaccacccc
      241 gcccgtcagc atcagccaga tcagcaataa tccatgttcg ggtttcttca tgaatctcct
      301 gctttacggt ccaccagctc ctcagccaac aaccgctttg cctgcgcgat ctgattgggc
      361 gtcaactgat tcgccatcaa cttgaggtaa tcgcgcgcct tcggatgacc gcgctcggcc
      421 gcggcataat accacgcata ggcccgcagc ctatcctgcg ctacaccgag ccccagctgg
      481 tacatcgtgc ccagattgcg ttgggcatca gcattgcccg cccgcgcggc gcgttgatac
      541 cattctacgg ccgccctgtg atcctgtttg acagcgaggc ccatatggta gtggatggct
      601 acataattct gcgccttgac atcgcccttt tcagcgcgtt ctagccactg cttaaatgag
      661 gtctcataat cccctgccct aaaggccgct tcgggatccg gatcggtgca gccgaagatg
      721 ccggtaaggg cgatgactag agctataacg tgatagcgca aaccgatgaa cttagtagtg
      781 ggccggcgtg gctcggcttg gtacgttaag caggctcttc gatccctgtg ctggtcgccg
      841 ggagtgaggg tgtcttttcc tcatctgccg gctcgatctt ctcagcggcc tccgacatgt
      901 cctgagcatc actgtgaaaa tcttcctgaa atagcaaccg gcttggttca ggatgcggag
      961 ggactataag gctgtttgga tcggtgtaga gggatccagt agactctgta gactctttgg
     1021 actcggtaat ttgctcctcg gtcttttcta taggctctct ctgcgtacta cttccttcct
     1081 gcgcaaggga ttcattttga attgtacgcc gacggcggcg gccgttgctc cccccccgtc
     1141 tgccacggcg cgatccttta gcaccgcgag catgggagga agaggaggag gaagttgaag
     1201 attcatgatc tttttcgcgc acgcgctctg ctgcgggagg ttcagtaatg ggcttattct
     1261 ccacctcgct gccgattgcc ggctcctcgg cgccggtccg ggccgatcct cccaaagtgc
     1321 tcggctcaaa ggagatactg ctttccttcc gcaaaacggc cgattgagcg ccttgcgcgc
     1381 tttgcccctc cggttgccgg cgctgcagcg gaggatattt atctgcagaa ggcgatcgtg
     1441 catcctccac cggggccacg atctcgcgct cttccgcctt ttctccgaat agatttgaga
     1501 atagccgccg gacgatgccg ggtcttggct tcttctcaag atcgatcggc tcgcgagcga
     1561 actgcttgac agccggttcc tcgataggcc ttttcccggc cgtctctatc aagatctccg
     1621 gtggctcagg cggggtagga agcttatagc tcatttcccg ataagcaaga ctcgcgtgat
     1681 cttgttgccg gatacgctga acctcgtact ggggcgtctc taagtgaggg ttagggatca
     1741 ccagcacctg cacatgttgc cgctgctcga tctcagtgac atcctggcgt ttctcgttga
     1801 gcaggaaagt ggccacctct accgggagtt gcacaatgat ccgggcggtc gactccttca
     1861 tggcgtcctc ctcaatcacc cgcagtactg aaagtgccaa agactcgata ctgcggatag
     1921 ctccctggcc gttgcagcgc ggacacacga tatggctaaa ctcggtcagg gacggccgca
     1981 gacgctgtcg cgacagctcc aacaggccaa accgggagat ccgcccaatt tgaacccggg
     2041 cccggtccaa tttaagcgcc tctttcaacc gattttccac caagcgctga tttttggggt
     2101 tggccatatc aatgaaatca atgacgatca accctccaag atcccgcagg cgggactgcc
     2161 gggcaatctc ttcggtggcc tcaagattgg tcataagcgc cgtttcctcg atatcactcc
     2221 ctcgggtggc ccgcgcggag ttgatgtcaa tcgtagtgag ggcttcggtg ggctcaacga
     2281 tgatcaatcc ccccgaaggc aaggccacct ccctcctgag ggccgcttcg atctggtttt
     2341 caatctgaaa ccgggtaaag agcgagatcc tgtcctcata aagcttgagc tttttgaggt
     2401 tttgcggcat gacttgttgc atgaagtcgc gacctttctc gtagagagcc cgatcatcga
     2461 ctaagatctc gccgatatcg ttgcggaaat aatctctgat cgcccggata ataatgtcgc
     2521 ggtcttggta gatcaggaaa gacgcagggc gcttctgagc cgcctctgca atcgcctgcc
     2581 agagatgcaa aagataatct agatcccatt gcaactcctc ggcgttcttg ccgaggcctg
     2641 ccgtacgtag aatcaagccc atcccctcgg ggatagcgag cgtgctcatg gcctcccggg
     2701 cctcctcgcg atcgacgcct tcgatctgcc tggagacgcc accggcccgc ggattattcg
     2761 gcatcagcac cagataacgt cccgccaggc tgataaaggt agtaagcgcg gcccccttgt
     2821 taccgcgttc gtctttctcg acctggacaa caagttcttg gccttccctc aggacatcct
     2881 tgatattggt ccgaccatta ccactaggcg actctataaa aagagaacgc gcgacctctt
     2941 tgagcggcag aaatccatgc cgttctacgc cgtaatcgac aaaacaggcc tccaggcttg
     3001 gctcgatgcg aactattttg cctttataaa tattcgattt tctttgctcg tacccggtag
     3061 cctcaatata taaatcataa agtcgttgcc catccacaag ggctacccgc aactcctcgg
     3121 gttgagttgc gttgatcaac attcttttca tcgttaaatc ctgtcttgcg cttctactac
     3181 agtcccgctg tccgggtata tgtctttgtt tgtccggaca gtgggaaagg aagggcgctt
     3241 taacttttaa gataagtcgc ttgacaagcg acaccgctaa aatcgactct ttttagtcag
     3301 gttcaggata aggactgcaa aagggaatag gaggatttca gcctaaaaat agtatcgtac
     3361 ggctgaaacc gcaggatgaa tcttcatgaa taataaacat gatgcagagc cacccgccct
     3421 gatcgattac aggcaccgtt ttgctctttt ttacaccacc ccccacggac ctgccgctcg
     3481 ccttgttcaa tgcctgcctg accccactca ctggcttagc ttaagccaac tctacactgg
     3541 aatcagcaag taaccctaac tatctaattt aaagacaaag atgccaaaaa caagttctat
     3601 tcacccacgt cctccccatg ctctcacgct gaatcccttg ccccctagga aataatatgt
     3661 aaaaacaagg agatccacta actataacag ggaataatat agcaatattg cgcttgagca
     3721 gcaatgcgca tatggaggta aaatagaccg catgaatctc cctagcgaat ctatggatgg
     3781 gtgcccatgc acgatcgttc ccgatcaggc aggccgacgt attgataatt tcctgatcgg
     3841 taatctcaaa ggtgtgccta aaagccgcat atatcgcatg ctgcgcacgg gtgaagttcg
     3901 ggtgaatggc ggcagaatac ggcaggacta tcgcttgaaa ccgggtgatg tgctgcgcat
     3961 ccccccggtc gaaagacggg atccttccat ccccccgaca gcgttggcga ttaaacgatt
     4021 aacctcctcg ttactcaagg atgatctgct ctatgaggat gaagccctta tcgttctgga
     4081 taaacccgcc gggatcccgg tgcatggggg caccggtttc gactgtgggg tgatcgaagc
     4141 actgcgcgcc ctgcgacccc acgatcctta ccttgagctg gctcatcggc tcgatcggga
     4201 tacctcgggc tgtctcctga tcgtgaaaca accctgccta ttgcgtcaga tccatgagat
     4261 gttccgcgag gggagtgtta tcaaacgcta tctgaccctt gtacgcggcc aatggcaggg
     4321 atcgggccgg atcatcgacg agggtttgcg aaaaaatatc ttgcgttctg gtgaacgtat
     4381 gattcaagtg cagaccgatg gtaaaagggc gcaaacctgg atgaccccga tcgagatctt
     4441 tgctcatggc agcttgatgg aggtgaagtt actgaccggg cggacccatc agatccgggt
     4501 gcacgccgct tataggggac acccggtggc cggtgatgcc aaatatggcg acagatcctt
     4561 taatgctcgg atgcgccgcg cgggtttacg gcatatgttc ctgcatgcca agagcctctg
     4621 ctttaaacga ccggattcga agcgcaagct ctttgtggaa gccgccctgc caaac
//
LOCUS       DASQSL010001102         1196 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_129744, whole genome shotgun sequence.
ACCESSION   DASQSL010001102 DASQSL010000000
VERSION     DASQSL010001102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1196
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129744"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..955)
                     /locus_tag="VE844_11435"
     CDS             complement(<1..955)
                     /locus_tag="VE844_11435"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HZC01937.1"
                     /translation="MRWLTTSGLGFMIGNFGLQDIAPQFAIENQESRIRNLKFSPLAG
                     LKGLLAGRVLAGRYRIEEVIGRGGMGAVYRAVDECLGRPVAVKVINVAVSDPKQAEEL
                     RTRFQCEARVAASLHHPNVIIVYDFGTDPELGLDFLVMELLHGEDLANRMARSGPPSL
                     STSLRILWEAGRGLAVGHRTGLIHRDVKPGNLFLEEDDGLGELRVRVVDFGIARVVEE
                     QEAASRITRFDWIALSPAYASPEQLRNEPNLTPASDVFSLGAIGYELLTGERLSSREG
                     TDRLADDDPQPVPSIRDRNCAVSPALEAVIRRALAFDPKERF"
BASE COUNT          251 a          367 c          357 g          221 t
ORIGIN      
        1 gaaaccgctc tttcggatcg aaagccagtg cacgacggat gaccgcctcc agcgccggcg
       61 atacggcgca gttgcggtcg cggatcgagg gaaccggctg cggatcgtca tcagctagcc
      121 tgtctgtacc ttcgcggctg gacagacgct ccccagtgag cagttcgtac ccgatggcgc
      181 ccagactgaa cacatccgag gcaggagtca aattgggctc attccgaagt tgctccggtg
      241 aggcgtacgc aggggagagt gctatccaat cgaaccgggt gatccggctg gcggcctcct
      301 gttcttcgac aacacgggcg atcccgaaat cgaccacccg aacgcgcagc tcaccgagcc
      361 catcgtcttc ctcaaggaag aggttgcctg gtttgacgtc gcgatggatg agcccagtcc
      421 ggtgacccac ggccagccca cggcctgcct cccacaggat gcgcagcgat gtggacagcg
      481 agggtggacc cgagcgtgcc atccggttcg ccaggtcttc gccgtgcaag agctccatca
      541 ccaggaagtc gagcccaagc tcgggatcgg tcccgaagtc gtacactatt attacattgg
      601 gatggtgaag actggcggcg acccgggcct cgcattggaa gcgcgtacgg agctcctcgg
      661 cctgcttggg gtcgctcact gcgacattga tgaccttgac cgcgaccggc cggccgaggc
      721 attcgtcgac cgcccggtag actgcgccca tgccaccgcg cccgatcacc tcctcgatgc
      781 ggtagcgtcc ggcgagcacg cgtccggcga ggaggccctt aagtcctgcc agaggagaga
      841 attttaggtt acggatcctc gattcttgat tttcgattgc gaactgtggg gcgatgtcct
      901 gcaatccaaa gtttccaatc ataaatccaa gaccgctagt cgtcagccaa cgcatcccga
      961 gcagcatgct ccaccgcccg aagcgtaccc cattcccgcg gaacccgctt cgtgagccct
     1021 ggggtagggt gccatgcagt aagaacgcct tgattccacc atcggtagaa ggataggaaa
     1081 ttcaacgcag ttttgcaacg gaaggatagg agccttaaaa tctgttatac gcgaatgact
     1141 ccaaaagaag ccatatttca agggcttaag ggcggtcgtg cccgactgac gggcgc
//
LOCUS       DASQSL010001103         1149 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_186182, whole genome shotgun sequence.
ACCESSION   DASQSL010001103 DASQSL010000000
VERSION     DASQSL010001103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186182"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..930)
                     /gene="hflC"
                     /locus_tag="VE844_11440"
     CDS             complement(<1..930)
                     /gene="hflC"
                     /locus_tag="VE844_11440"
                     /inference="COORDINATES: protein motif:HMM:TIGR01932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HZC01938.1"
                     /translation="MRALIVIAVLAIIGLIVLRQTVYVVDETEQVVITRFGEVRVVQT
                     TPGLSVKMPFVDVITRLDKRVLRIDAQPAALPDRDKQNLIIDLYARYRITDPIQFRKT
                     LQTETFARSRLADIVISTLRDRIALRDRFDIIGSSPALDEQGAPVVDDEGLTLVEARE
                     TRTEILNEVLETVKRRTEEQEFGIEMIDVRIKRADFPESVADSIYTRMRAERNRIATR
                     FRAEGEEEDLKIRAGANREREVILAEAERQSSQIRGEGEAEAIRTLAQALNQDPDFFA
                     FRRSLEAYQKFLSQQDTIILSANAPLFRYLGTPG"
     gene            complement(960..>1149)
                     /locus_tag="VE844_11445"
     CDS             complement(960..>1149)
                     /locus_tag="VE844_11445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018286746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HflK protein"
                     /protein_id="HZC01939.1"
                     /translation="RFVSVLREHQNSREVTRQRLYLEAMEEILPGITKIVLSPEAQSV
                     LILGQEGQVAPVPIGPSP"
BASE COUNT          228 a          333 c          326 g          262 t
ORIGIN      
        1 accgggagtg cccaggtacc ggaacagcgg tgcgttagcg gaaaggatga tcgtgtcctg
       61 ctgactcaag aacttctggt aagcctccag gctgcggcgg aaagcgaaaa agtccgggtc
      121 ctggtttagc gcctgggcca gagttctgat ggcctcggcc tcgccttcgc ccctgatctg
      181 gctggattgc cgttccgctt cagccaggat tacttcgcgc tcccggttgg cgccagcacg
      241 gattttcagg tcctcttcct caccctcggc tcggaaccgg gtggcaatgc ggttgcgctc
      301 ggccctcatg cgggtgtaga tgctgtcggc taccgattcc gggaagtcgg cccgcttgat
      361 tctcacgtcg atcatctcaa tgccaaattc ctgctcctca gtccgtcgct tgacagtttc
      421 taggacttca ttaaggattt cggtgcgggt ctctctggct tccacaaggg tgagtccttc
      481 gtcgtcaacc accggagcgc cctgttcgtc caaggctggg ctggacccga taatatcaaa
      541 gcggtcgcgc aaggcaatgc ggtcacgcag ggtagagata acaatgtcgg ccagacgact
      601 tctggcgaag gtctccgttt gcagggtctt gcggaactgg atcgggtcag tgatgcggta
      661 gcgggcgtaa aggtcaataa tcaggttttg cttgtcccga tccggcaggg cggcgggctg
      721 agcgtcaatc cgtaagaccc gcttgtccag ccgggtgatt acgtccacaa aaggcatctt
      781 cacactcagg ccaggcgtgg tctggaccac acgcacttcg ccaaagcggg taataacgac
      841 ctgctcggtc tcgtccacaa cgtaaacagt ctggcgcagg acaatcagcc caattattgc
      901 cagcaccgct attacaatta aagctctcat ctagattctc tgtaccacag cttagttttt
      961 taagggctag ggccaatcgg cacaggcgca acttgcccct cttggcccag aatcagcacc
     1021 gattgagcct cgggtgataa tacgattttg gtgatcccgg ggagtatttc ttccatagct
     1081 tccaggtaaa gccgctgccg ggtcacctcc cgggagttct ggtgctctct caagaccgac
     1141 acaaaccgg
//
LOCUS       DASQSL010001104         1597 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_129761, whole genome shotgun sequence.
ACCESSION   DASQSL010001104 DASQSL010000000
VERSION     DASQSL010001104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1597
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129761"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            364..1335
                     /locus_tag="VE844_11450"
     CDS             364..1335
                     /locus_tag="VE844_11450"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HZC01940.1"
                     /translation="MSIRTALTERFSLEYPIVSAPMGSVAGGHLTAAVSNAGALGLVG
                     GGYGDSEWLRTELSTARSETKRPWGVGLITWHATREILDLALSYEPHAFMLSFGDPGP
                     FAPAIKEAGCTLICQVQDVEDGRAAKAAGADIIVAQGTEAGGHGADRSTLPLVPAVVD
                     AVAPTPVLAAGGIADGRGLAAALMLGAQGALIGTRFYAATEALGHESAKERILVAKGR
                     DTERTRVFDIIRQHAWPQPFTGRAIRNPFMERWEGRENDLSAALDAEMPRFRAAVRDG
                     DFDRAMIWAGEGVDVISDIAPAGELVRRIGAETEACLRHASELLRKT"
BASE COUNT          359 a          436 c          511 g          291 t
ORIGIN      
        1 gaacccgaaa aaggggcggg ccaaatccgc gaccccgagg tgaacgatcg gggcctggaa
       61 ctgcgcaagc gcctcataag gacgataaag gctcttcagc gttcaaacgt cgaggcataa
      121 acaggagagg gatcaagacg ctggtgagcc aactcgtcta gcacgaaggg gttggacaag
      181 aggatgttgt ccttatcgaa gggaccttct gcggatgcac gagctcggcc tctataagct
      241 tcttgacctc tagaaaagag agtcttgctc gtcaagtcat ggccgcagcg gtgcaaagag
      301 ctatcatggg gttgttaacg tgaaccggcc tgactaagcg aactcgtaaa gggacagaag
      361 gttatgagca tcaggaccgc actgacggag agattcagct tggagtaccc gatcgtttca
      421 gctcccatgg gtagcgttgc tggaggccat ctaaccgcgg cggtatctaa cgccggagcg
      481 ttggggcttg tcggcggcgg ttacggcgac tccgagtggt tgcgcaccga actctctaca
      541 gccaggagcg agacaaagcg tccctggggc gtaggactga tcacttggca cgctacgcgg
      601 gagatccttg atctcgccct gagctacgag ccgcacgctt tcatgctctc tttcggtgat
      661 ccaggtccgt ttgcccctgc tatcaaggag gcaggttgca cgctgatctg ccaggtacag
      721 gacgtggaag acgggcgtgc tgccaaggca gcgggcgcgg acatcatcgt cgcgcaagga
      781 acggaagccg gcggacacgg tgcggaccgg tcgactttac cgctggtacc cgcggtggtc
      841 gacgcggtag ccccgacgcc ggtgttggcc gctggcggca tcgccgacgg gcggggccta
      901 gcagcggcgc taatgctcgg cgcacaggga gcactgatag gaactcgctt ctatgcggcc
      961 actgaagcac taggtcacga aagtgctaag gagcgcattt tggtcgccaa gggtcgcgat
     1021 acagagcgaa ctcgggtctt cgacattata cgccagcatg cgtggcctca gccgttcacc
     1081 ggtcgcgcca tacgcaatcc ctttatggaa cgctgggagg gaagggaaaa tgacctcagc
     1141 gcagcactgg atgcggagat gccaaggttc cgagctgccg tcagggacgg agatttcgat
     1201 agggcgatga tttgggccgg ggagggggtg gacgtgatct ccgacattgc ccccgcgggt
     1261 gagcttgtaa gacgcatcgg tgcagaaacc gaagcttgtc tgcggcacgc gagcgaactc
     1321 ttgcgtaaga cctgagaacg aggcttgccc gatgtgaacc agcaagaact agaggtggac
     1381 gatggcgtta ggcgaattcg aggacgctat tgacaccact ctgacatcac cgcgaacgca
     1441 ataccgtgca acagtgctct tgaacttgac aaatagtctt tgccgggcac gctctagtag
     1501 ggcaaaatgt acaccaagca gcactgccag cacaccctcg ccgatccccc cttcggcggt
     1561 ctgaagcgcg cccaccaggt agctcaagaa atggctt
//
LOCUS       DASQSL010001105         1359 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_103246, whole genome shotgun sequence.
ACCESSION   DASQSL010001105 DASQSL010000000
VERSION     DASQSL010001105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1359)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1359)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1359
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103246"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1275)
                     /locus_tag="VE844_11455"
     CDS             complement(<1..1275)
                     /locus_tag="VE844_11455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HZC01941.1"
                     /translation="MSVAITYSRAQVGIHAPPVIIEVHLSNGLPGLSIAGLPEATVKE
                     SKDRVRSALINSNFQFPLRRITINLAPADLPKEGGRFDLPIALGVLAASGQIQTGRLA
                     EYEFVGEHALTGELRPIKGMLPVAAYAAMAGRSLIVPSENANEAALVSTATVLPARHL
                     LEVCAHLSQTQDFPIHQCQPLSNSAEEGLDLAEVRSQHHAKRALEIAAAGGRNLLMVG
                     PPGTGKSMLARRLPGILPPMTEQEALESAAVASVSNQGFRLESWKRRPFRAPHHTASA
                     IALIGGGSHPRPGEISLAHHGVLFLDELPEYDRHALEVLREPLEAGYVSVSRAAYQAD
                     FPAQAQMLAAMNPCPCGFLGDSHRCRCTPEQIRRYRSRISGPLLDRIDMHIEVPNVPR
                     EVLLDDEPPSESSAVVRERVCRARERQIDRSGK"
BASE COUNT          286 a          409 c          399 g          265 t
ORIGIN      
        1 cttaccgctc cggtcgattt gacgctcgcg ggctctacaa acacgctctc gaactaccgc
       61 actggactcc gatggcggct cgtcatccaa taaaacctca cggggaacat taggcacctc
      121 gatgtgcata tcgatgcgat ccaacagcgg tcccgagatc cgtgagcgat agcgccgaat
      181 ttgctcgggc gtacaacggc agcggtgact gtctcccaga aatccgcacg gacagggatt
      241 catggccgcc agcatctggg cttgcgctgg aaaatccgcc tgataggcgg cccgtgagac
      301 gctcacatag cccgcctcca ggggttcacg aagcacttcg agcgcatgcc gatcatactc
      361 gggcagttca tccaagaata agaccccatg gtgcgcaagg gagatctcgc ccgggcgggg
      421 gtggctaccc ccgcctatca aagcgatcgc cgaggcggta tgatgcggcg cccggaaggg
      481 ccgccgtttc caggactcca atctaaaacc ctgattactg accgaggcca cggccgccga
      541 ttctaaagcc tcttgttcag tcatcggcgg caggatccca ggcaaccgcc gcgccaacat
      601 gctcttaccg gtacccgggg gacccaccat cagcaggtta cggccacccg ccgccgcgat
      661 ctccagtgcc cgtttagcat gatgttggga tcttacctcg gcgaggtcta gcccctcttc
      721 agcactgttt gaaagaggct ggcattgatg gatgggaaaa tcttgggttt ggctaaggtg
      781 ggcacagacc tctaacaagt ggcgtgccgg cagcaccgtg gctgtgctta ccaaggccgc
      841 ttcattggca ttctcggagg gtacgattag actccgtccg gccattgcgg cgtaggcagc
      901 caccggcagc atgcccttga tcgggcgcaa ttcaccggtc agggcgtgct cgcctacaaa
      961 ttcatactcg gcgagccgcc cggtctggat ctgcccagaa gcagcgagta ccccaagcgc
     1021 gataggcaga tcgaaacggc ctccctcttt aggaagatcg gcaggggcaa ggttgatggt
     1081 gatgcgccgt agaggaaact ggaaattcga attgataagc gcgctgcgga cgcggtcctt
     1141 actttccttc acggtagctt caggcaagcc agcaatcgag agacccggca gaccgtttga
     1201 gagatggact tcgatgatca cagggggggc atggatcccc acttgggcgc ggctatacgt
     1261 aatcgcaact gacatcgttc cctaagggga tggaggggct tgctttagca attctgcctc
     1321 aagcctggcc acctgcttct ctagggcttc gagcctgat
//
LOCUS       DASQSL010001106         2231 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_186187, whole genome shotgun sequence.
ACCESSION   DASQSL010001106 DASQSL010000000
VERSION     DASQSL010001106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2231
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186187"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            213..476
                     /gene="rpsP"
                     /locus_tag="VE844_11460"
     CDS             213..476
                     /gene="rpsP"
                     /locus_tag="VE844_11460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HZC01942.1"
                     /translation="MVTIRLSRAGAKKRPFYHIVVTDSRNKRDGRYIERLGFFNPITN
                     EKEESMRFNQERLEYWLAKGAKVSERVASLIRHIKAPNIPSAA"
     gene            511..1023
                     /gene="rimM"
                     /locus_tag="VE844_11465"
     CDS             511..1023
                     /gene="rimM"
                     /locus_tag="VE844_11465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809448.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HZC01943.1"
                     /translation="MARDRADYVVVGRISGLHGIQGWIKVFSYTRPRENVLHYSPWWI
                     RLDQKWQVVARIDGKIQGSGIIAQMEGYQDRTAARGLVGADIAVRRCQLPGLEHGEFY
                     WVELIGLQVVSPQGGVLGTVSQVMETGANDVLIVHGQREYLIPFIQGVYILDIDLVKG
                     CIEVDWGADF"
     gene            1030..1770
                     /gene="trmD"
                     /locus_tag="VE844_11470"
     CDS             1030..1770
                     /gene="trmD"
                     /locus_tag="VE844_11470"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012768744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0030488 - tRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HZC01944.1"
                     /translation="MSIGVITLFPEMFAILSDYGVTGRALKKGLVELRAWDLRDFTKD
                     RHRTVDDRPYGGGPGMVMMFEPLQAAIRSADAALGGGAHVVALTPQGRRLDQHGVGGL
                     VQRERLLLVAGRYEGIDERLIEAEIDEEWSIGDYVLSGGEIAAMVLIDAMIRIVPGAL
                     GHEASAREDSFMNDLLDYPHYTRPEAVNGRRVPAVLSSGNHEAIRRWRLEQALGRTWL
                     RRPDLLEKRALSPEEHALLDEFIRAYKT"
     gene            1827..2189
                     /gene="rplS"
                     /locus_tag="VE844_11475"
     CDS             1827..2189
                     /gene="rplS"
                     /locus_tag="VE844_11475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012637428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HZC01945.1"
                     /translation="MSNIIDQIEKEGMTREVPDFRPGDMVVVQVKVKEGDRERLQAFE
                     GVVIAKRNRGMNSSFTVRKISHGEGVERVFPTYSPLVHEIIVKRRGDVRRAKLYYMRK
                     LSGKAARIKEKIKQHNIG"
BASE COUNT          538 a          526 c          669 g          498 t
ORIGIN      
        1 cttataggct ctaaatcccc tgcttcctcc gaggcggatc gcggatgagg tggttacctc
       61 tgttcacgcc ctttgtcatc agttcctgct gccctaaccg ctctatatct tttatttctc
      121 tacggatttc ccgtatgata ggcaacctcg ctcaggacaa tcccactttt gattaaccat
      181 ctacacagat caattttagg actaaaagga ttatggtaac gattcgtttg agccgcgcag
      241 gcgccaaaaa gaggcctttc tatcatatcg tagtcaccga cagccgtaat aagcgagacg
      301 gccgttatat cgaacggctg ggattcttta atccaatcac aaatgaaaaa gaagagagta
      361 tgaggttcaa ccaggagcgc ttagaatatt ggctcgccaa aggcgctaag gtctccgagc
      421 gggtagcaag cttgattagg catataaagg cacctaatat cccttctgcc gcctaaaggg
      481 tgtaggaaag gataaattag acaccaggag atggcgcgtg accgcgccga ttacgtagtc
      541 gtcggacgga tcagtggcct acacgggatc caaggctgga tcaaggtgtt ttcctatacc
      601 cgtcccaggg agaatgttct acattattca ccgtggtgga tacgcttgga tcaaaaatgg
      661 caggtagtgg cccgcattga tggcaagatc cagggcagcg gcataatcgc gcagatggaa
      721 ggatatcaag accgtacggc tgcccggggt ttagtcggag ctgatatcgc tgttcgccgt
      781 tgtcaattac ctgggctcga gcacggtgaa ttctactggg tcgagctcat aggcttgcag
      841 gtggtatccc cgcaaggcgg ggtgcttggg accgtcagtc aagtgatgga aaccggggcg
      901 aatgatgtgc tgatagtcca tggtcagcgg gaatacctga tcccctttat ccaaggggtg
      961 tatatccttg atatcgatct ggtcaaggga tgtattgagg tcgactgggg agccgatttt
     1021 tgagccgtgc tgagtatcgg ggtgatcacc ctgtttccgg agatgtttgc cattctcagc
     1081 gattatgggg tgacaggacg ggccctcaaa aagggtctcg tggaactgcg ggcatgggat
     1141 ctacgggatt tcactaaaga tcgccatcgc acggtggatg atcgtcccta tgggggtggg
     1201 ccggggatgg tgatgatgtt cgagccttta caggcggcca tccggagcgc cgacgcggcg
     1261 cttggaggag gtgctcatgt ggtggcgctt actcctcaag ggagacggtt ggatcaacac
     1321 ggtgtaggag ggctcgttca acgcgagcgc ctgctattag tagccggacg ctatgaaggg
     1381 atcgatgagc ggctgatcga agccgagatc gatgaagaat ggtcgatcgg cgattatgtc
     1441 ctgagcgggg gagagatcgc agcgatggtg ctcatcgatg cgatgatccg gatcgtgccg
     1501 ggcgcattag ggcacgaagc ctcggcgcgg gaggattcat tcatgaatga tctgttggat
     1561 tatccgcact atacacggcc tgaagcggtc aatggacgcc gggtgcccgc ggtcctctcg
     1621 agcggcaacc acgaggcgat ccgccgctgg cggctcgaac aagcgctggg caggacatgg
     1681 ctaaggcggc ccgatctgct cgagaagcgc gcgctgagtc cagaggaaca cgcgctgttg
     1741 gatgaattta tccgcgcgta taaaacctaa taataagtcc ttggatttaa ttgaggatac
     1801 agaatcaagc gttataagga gctagcatga gcaatatcat cgaccaaatc gagaaggaag
     1861 gaatgacccg cgaggtcccg gatttcaggc ccggggatat ggtagtcgtt caggtcaagg
     1921 tcaaggaagg cgatcgcgaa cgcctccaag cctttgaagg ggtagtcatc gccaagcgta
     1981 accgcggtat gaactcttcc tttacagtga ggaagatctc ccatggagaa ggcgtagagc
     2041 gggtctttcc tacatatagc cccttggtgc acgagatcat cgtcaagcgc aggggcgatg
     2101 tgcgccgcgc taagctttat tacatgcgaa aactgagtgg aaaagccgcg cgtatcaagg
     2161 aaaagatcaa gcaacataac ataggttagt tcttaaggac gccataaacg cgctccaagc
     2221 cgagtttcag g
//
LOCUS       DASQSL010001107         1634 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_22946, whole genome shotgun sequence.
ACCESSION   DASQSL010001107 DASQSL010000000
VERSION     DASQSL010001107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1634
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22946"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..186)
                     /locus_tag="VE844_11480"
     CDS             complement(<1..186)
                     /locus_tag="VE844_11480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008068555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HZC01946.1"
                     /translation="MSGSGIHLKIGALSKQADCNIDTIRYYERIGLLPVPPRAQGGYR
                     LYGLEHLKRLNFIRRARE"
     gene            288..701
                     /locus_tag="VE844_11485"
     CDS             288..701
                     /locus_tag="VE844_11485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mercuric transporter MerT family protein"
                     /protein_id="HZC01947.1"
                     /translation="MSKPFDQALTGDKALRAEGDDKAARKVFVTIVGSIIAALAASSC
                     CVIPLVLFTLGVSGAWIANLTALAPYQPLFVVLTLAFLAWGFWMVYRKPKIVCAEGYC
                     ARPISDRIAKTGLWVATVLITIALAFPYVAPLFGA"
     gene            715..999
                     /gene="merP"
                     /locus_tag="VE844_11490"
     CDS             715..999
                     /gene="merP"
                     /locus_tag="VE844_11490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005028432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045340 - mercury ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mercury resistance system periplasmic binding
                     protein MerP"
                     /protein_id="HZC01948.1"
                     /translation="MRISASAFAALAAILSVYPALAGEKTVTLNVDNMYCASCAPVVK
                     KSLARVEGVTKVEVSRETNTATVTFDDAKTSVATLIETTTNAGYPSRLAK"
     gene            1243..1491
                     /locus_tag="VE844_11495"
     CDS             1243..1491
                     /locus_tag="VE844_11495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01949.1"
                     /translation="MGTACIANAFRCGRTHCYFTGPFFLLMACLALLYGLGMLEFGAQ
                     GWAWLGLGLVIGTVGLWWLPEQRWGQFAGRRIKSLTLQ"
BASE COUNT          330 a          444 c          474 g          386 t
ORIGIN      
        1 ctcgcgtgcc cgtcggatga agttcaggcg tttcaagtgc tctaagccgt ataggcggta
       61 gccaccttgc gcacgtgggg gcacgggcag taacccgatc cgctcgtaat agcggatagt
      121 gtcaatattg cagtccgcct gcttcgatag ggcccctatc ttaaggtgta ttccactgcc
      181 actcaattta attaagctcc ttgtaaacgg gaatagcttg actctgtagc aactacagac
      241 tctatattta ttatagatta gtaagcaatg gagacttcac aatggcaatg agcaaaccat
      301 tcgatcaagc ccttacggga gacaaagcgc tccgcgcaga aggggatgat aaggcggcta
      361 gaaaagtatt cgtcactatt gtagggagca tcatcgcggc actagccgct tcctcctgct
      421 gtgtcatccc gctggtgttg ttcacccttg gggtgagcgg tgcctggata gccaacctga
      481 ccgccctggc accttatcaa cccctctttg tggtgctgac gctcgcgttt ctcgcctggg
      541 ggttttggat ggtctatcgt aaacccaaga tcgtgtgcgc ggaaggctac tgcgccaggc
      601 ccatctcgga tcgcatcgcc aagaccggcc tttgggttgc gacggtgttg atcaccatcg
      661 cgcttgcttt cccctacgtt gcacccctct ttggggctta gagaggagac tccgatgaga
      721 atatcagcct cagcattcgc ggccttagcc gccattctat cagtgtaccc cgctcttgcg
      781 ggcgagaaaa cggtgacgct caacgtggac aatatgtact gcgcttcatg cgccccggtg
      841 gtaaaaaaga gcctcgcgcg ggtcgaaggc gtcaccaagg tagaggtctc gcgcgagacc
      901 aataccgcga ccgtgacctt cgatgatgcc aagaccagtg tggcgaccct catcgagacc
      961 accacgaacg cgggctatcc gtcacgctta gcgaagtagg gcaagggccg tggacaataa
     1021 caaactgatc gtgacgggtg tcacgggcgc tgcgattacc gtcttttgtt ctacctgaga
     1081 ctttgctgcg ccatgccgga agcctgtcat gaatcaagag attgggtcgc caggcgccga
     1141 agcctcgtct tgggctgggg gctgcctggc ctggcgctgg cggtttccct ctttatagag
     1201 ccgccgtggc gagcctggat ctgagtcgtc agcctcctct ggatgggcac ggcctgtatt
     1261 gccaatgcat tccgctgtgg ccggacgcac tgttacttca ctgggccgtt cttcctcttg
     1321 atggcctgtc tcgcgctgct ttatggcctt gggatgctcg agtttggggc acaaggctgg
     1381 gcatggctgg gtcttggatt ggtgatcggt acagtgggct tatggtggct gcctgaacag
     1441 cggtggggcc aatttgctgg ccgccgtata aaatccttga ctctgcagta actacaggat
     1501 ctatgtttag attacggaat gaggagtcgg aatgaggaat cactctatga gcatccaaag
     1561 actacgtatc actagcatga cctgtgacca ctgtgccagg accgtggagg acgccttgaa
     1621 cgcgctgccc gggg
//
LOCUS       DASQSL010001108         1337 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_196505, whole genome shotgun sequence.
ACCESSION   DASQSL010001108 DASQSL010000000
VERSION     DASQSL010001108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1337)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1337)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1337
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196505"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(60..545)
                     /locus_tag="VE844_11500"
     CDS             complement(60..545)
                     /locus_tag="VE844_11500"
                     /inference="COORDINATES: protein motif:HMM:NF024752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC01950.1"
                     /translation="MPRPYDATEQKRCYSGKKKRHMLKNLLLVNRALRILFLSETCPG
                     SVHDKRIADTAPPPLPAGSQLLQDLGFQAFTLDGVDILQPTKKPRGQELTRAQKAKNR
                     RLARRRVRIEHVNSSVKRCRMLKETIRVWKAGIRDMVMEIGCALHNFRVRLTPSWAPM
                     V"
     gene            complement(476..1042)
                     /locus_tag="VE844_11505"
     CDS             complement(476..1042)
                     /locus_tag="VE844_11505"
                     /inference="COORDINATES: protein motif:HMM:NF025000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC01951.1"
                     /translation="MLRYRDLPTHTSEVLDLTSLTVDEFRALVPLFETAFLGDMAEWT
                     FHGRRRQAQRYTTYKNCPLPTPEDRLLFVLVYLKQNPTQLLHGRLFGMRQSKATQWIH
                     VLLPVLRNTLRTLGDAPCRRVEALRERLEGDVPHLPLEPSPAEEVRPTTPPVAPLFVM
                     MAPSDPSRAPTTRLNRKGVIAARKSGTC"
     gene            1134..1313
                     /locus_tag="VE844_11510"
     CDS             1134..1313
                     /locus_tag="VE844_11510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01952.1"
                     /translation="MSALLALRDRAVQEGGDAVINIKSFYKKNEVISDSEYECHAGGI
                     LAGVALQGTVVRLTK"
BASE COUNT          290 a          366 c          388 g          293 t
ORIGIN      
        1 catacctaaa tttaccgtca aagtcttggt caagagatac aaattagagt tcatcacgat
       61 taaaccatcg gcgcccatga tggcgtcaag cgaacccgaa agttatgcag tgcacagccg
      121 atttccatca ccatgtcgcg aatcccggct ttccatacac gaatggtctc tttaagcatg
      181 cggcaacgtt tgacgctgct gttgacatgt tcgatgcgca cccgtcgccg agcgagccgc
      241 cgattcttcg ctttctgcgc tcgcgtcagc tcttggccgc ggggcttctt cgtcggttgg
      301 aggatgtcca ccccgtccag cgtaaatgcc tgaaagccca aatcttgcag cagctggctc
      361 cctgctggca gtgggggtgg cgcggtgtcg gcgatgcgct tgtcatggac actgcctgga
      421 caggtctcac tcaggaagag gatgcgcaag gccctattga ccagcagaag atttttcagc
      481 atgtgccgct ttttcttgcc gctataacac cttttctgtt cagtcgcgtc gtaggggcgc
      541 gggatgggtc gctcggtgcc atcatgacaa aaaggggagc gactgggggt gtggtcggtc
      601 ggacttcttc tgcgggtgat ggctctagcg gcaggtgtgg tacatccccc tccaggcgtt
      661 cgcgcaaggc ctccacacga cgacagggcg catcccccaa ggtgcgcagg gtattgcgta
      721 acacaggcag taagacatga atccactgcg tggccttgga ttgacgcatc ccgaacaagc
      781 gtccatgcag cagttgcgtg ggattctgct tgaggtagac cagaacgaac aagagccgat
      841 cttccggagt gggtagggga cagttcttat acgtcgtgta gcgttgcgct tgccgacgcc
      901 gcccatggaa ggtccattcg gccatgtcgc ccaagaacgc tgtctcgaac agggggacca
      961 gcgctctaaa ctcatccacc gtcaagctcg tcaaatccaa tacctcggac gtatgggtgg
     1021 gaagatcgcg gtaccggagc atgggctgtg cctccttttg tgaaaggcac agtataaccc
     1081 aaatcgtgat gaactctcat aagtctgatc aagaggcatg cgagtgggcc ttcttgtccg
     1141 ccctgcttgc cttgcgagat cgcgcggttc aggaaggcgg cgacgccgtt atcaacatca
     1201 agagcttcta caagaaaaat gaagtcatca gcgacagcga gtacgaatgc catgcaggtg
     1261 gcatccttgc cggcgtggcg ttgcagggga ctgttgtcag actcaccaaa taagccagac
     1321 cgatggcgag ttcaagc
//
LOCUS       DASQSL010001109         1774 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_76641, whole genome shotgun sequence.
ACCESSION   DASQSL010001109 DASQSL010000000
VERSION     DASQSL010001109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76641"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1647
                     /locus_tag="VE844_11515"
     CDS             <1..1647
                     /locus_tag="VE844_11515"
                     /inference="COORDINATES: protein motif:HMM:NF020683.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose oxidase-like domain-containing
                     protein"
                     /protein_id="HZC01953.1"
                     /translation="YIDNGIWIINDVPQIWDGRQWKPTAAFIGLPLYPRMHVASNGRV
                     FMSGPNDETYLLDIEGSGTWTALPEPGGLRRNGNREYAPSVMYDAGKVIYIGGGNDRG
                     TDLPTAAAEIIDLGANPPTWREAAHMHFRRRQHNATILADGSILVIGGTRGPGFNDLS
                     PGAPVHVAELWDPATNEWKQLAAEDVDRCYHGTAVLLPDARVLSAGGGEFVIGSQPND
                     PKDNHRNGQIFHPPYLFLGPRPEITSAPEKTGYGETFSVQVSGPDIGKVTWIRLPSVT
                     HAFDENQRINVLQSSINDGRLAITAPERPELCPPGHYMLFVLSKAGVPSVAQIMRIGA
                     PVAQPRTAVSPALAEARPHTELGGKTRTQERDEVVRAQSSGTHVTVGLTAKCPYGLGA
                     CWGGAYEALKKLEGVAAVRPIANAEDSTAEVYLRDQGLPDLDNWPEQFAHWANGSYDF
                     RGVEVTVTGTVQKQDGNLQLTVPSLDAPVQLMPLEQGMNLQWDHRARKIKDATSDERD
                     AYQKLETRYQNLRSGEEPTPVTGPLTKTGTGWILYVRKSE"
BASE COUNT          395 a          518 c          533 g          328 t
ORIGIN      
        1 tatatcgata atggtatatg gatcattaat gatgtcccgc agatctggga tgggcgccag
       61 tggaagccga ccgctgcctt tatcggtctt ccgctgtatc cgcgcatgca cgtcgcttcg
      121 aacgggcggg tgttcatgtc cgggccgaat gacgagactt acctgctcga cattgagggc
      181 tcgggcacct ggactgcgct gcccgagccg gggggattac gacgcaacgg gaaccgggag
      241 tatgctccgt cggtaatgta cgatgccgga aaggtcattt acatcggcgg cggcaacgat
      301 cggggtaccg atcttcctac cgccgcggcc gaaatcatcg atctgggtgc caatcccccg
      361 acgtggcgtg aggccgcgca tatgcacttc cggcgccgcc agcataatgc gacgattctt
      421 gcggacggga gcatcctggt gatcggaggg accaggggcc ctggcttcaa cgatttatca
      481 ccaggtgcac ctgtccacgt cgccgaactg tgggatccgg caacgaacga atggaagcag
      541 cttgcggctg aggatgtgga tcgttgttac cacgggacgg ccgtgctgct tccggatgcc
      601 agggtgctca gcgccggtgg cggcgagttc gtcatcggca gccagccaaa tgatcccaaa
      661 gacaaccacc gcaacgggca aatctttcat cctccctatc tattcctagg tccgcgcccg
      721 gagatcacgt ctgcccccga gaaaaccggt tacggcgaga cattttctgt tcaagtttcg
      781 ggacccgata tcgggaaggt tacgtggata cggcttccct cggtgactca cgccttcgac
      841 gaaaaccagc gcatcaacgt tcttcagtcc agcatcaacg acggtcgttt ggctattact
      901 gcgccggaac ggccagagct ctgccctcca gggcattaca tgcttttcgt gctcagcaag
      961 gcgggggtcc catccgtcgc gcagatcatg cggatcggcg cgcctgtggc ccagcctcgt
     1021 acagccgtct cgccggcact cgccgaggcg agaccgcata ccgaacttgg agggaagacc
     1081 cgcacccagg aacgcgacga agtcgtgcgg gcccaatcca gcggcaccca tgtcacggtc
     1141 ggcctgaccg cgaagtgtcc ctacgggctg ggggcgtgtt ggggcggggc gtacgaggcc
     1201 ttgaaaaagc tggaaggagt cgcggcggta cggccaatcg caaatgccga ggactcgaca
     1261 gccgaagttt accttcgcga tcaaggtctg ccggatctcg ataactggcc agaacaattc
     1321 gcccactggg ccaacggcag ttatgacttc cgcggcgtgg aggtaactgt cacgggcacc
     1381 gttcaaaaac aagacggcaa cttgcagctg accgtacctt ctcttgatgc cccagtgcag
     1441 ttgatgccac tcgagcaagg catgaatctg caatgggacc accgagccag aaagatcaaa
     1501 gacgccacaa gcgatgaacg agacgcatac cagaagttgg aaacaaggta tcaaaacctc
     1561 agaagcgggg aagaaccaac ccctgtcact ggcccattga caaagacggg cactggatgg
     1621 atcctctacg ttcgaaaatc cgagtaataa gcggcgaacg ccttaggtcg ttgacctacc
     1681 atcatcacga aactccgctt gtaagggcat tacgaacaca agcgttcaac tggcggtgcg
     1741 gctgaggcgg gcaggaacgc gtgagcagtt ggac
//
LOCUS       DASQSL010001110         1458 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_186211, whole genome shotgun sequence.
ACCESSION   DASQSL010001110 DASQSL010000000
VERSION     DASQSL010001110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1458
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186211"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            280..1422
                     /locus_tag="VE844_11520"
     CDS             280..1422
                     /locus_tag="VE844_11520"
                     /inference="COORDINATES: protein motif:HMM:NF033592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC01954.1"
                     /translation="MLIPFVGAVHRHLHSWSLGPVLQCLERFLDEPAFRNTLIQKPSA
                     FTRPQGLYSLSVTLKTFLIQCLAQDHSCRTAVATAKDRGWLPPNASPGTAAYCRARDA
                     LAAEGLQSAVEHTAQALDAGVSDQHLGLGRQVHVVDGTGIALPDTEANQDAYPQPSEQ
                     KPGCGFPVLRLVAFMSLATGAVSRYRIGTLHEHEQRLFQDLRVHLGVGEVVLGDRNFG
                     PFANLVLLKRQGAEGVFRRHQSRGAGVQRLKRLGKDDHLVRWSIRPHRAPVWLDASVE
                     LPSTFIVREVSFQVTQPGFRTKSVTLVTTLLDAKSYPAWALAELYFRRWRMELWLRDI
                     KITMDMDGLDHGIGHFRHPRQLPHSFTRIKNTISINSSKHCKFFVV"
BASE COUNT          324 a          410 c          371 g          353 t
ORIGIN      
        1 attatagcat atatgagaca tatatgtcaa ataaacgaag ttttatgaat agaaggctta
       61 atttatgaac tatgaagtat tggattgatt aatctacagt gccactgtcc atctagggta
      121 tacccgaatg gcactgacgt agactcaaat gattttttat tcaatacctt agaattacag
      181 gagaagctcg actttttgga cttgacccct gagcgcaaac aaacctccaa tgcgccaagc
      241 tcaaagtgtc aattacccgt ttcacattgg aggtatgtca tgttaattcc tttcgttggt
      301 gcggtccacc gtcacctcca ctcctggtca ctgggacccg tcctccagtg tctcgagcga
      361 ttcctcgatg aacccgcgtt tcgaaacacg ctgatccaga aacccagcgc ctttacccgc
      421 ccccaaggtc tctactcgct gtccgtcacg ctcaagacgt tcctcattca gtgtctcgct
      481 caggatcatt cgtgtcgcac cgctgtggcc acggccaaag atcgtggctg gctaccaccg
      541 aatgcctcgc ccggtacggc cgcctactgc cgagcccgtg atgccttggc cgccgaaggg
      601 ctccaaagcg ccgttgagca caccgctcaa gctctcgacg ccggcgtctc agatcagcac
      661 ctcgggttgg gccgacaggt ccatgtcgtc gatggcaccg gcattgccct gccggatacc
      721 gaggccaatc aagacgctta tcctcaaccc tcggagcaaa agcccggctg cggctttccc
      781 gtcttgcgcc tggtggcctt catgtcgctg gccacgggtg cggtgagccg ctatcgcatc
      841 gggacgctgc atgagcatga acagcgtctg ttccaagacc tgcgggttca tctgggcgta
      901 ggtgaagtcg tgctgggaga ccgcaacttc ggcccctttg ccaatctggt gttgctcaag
      961 cgtcaaggtg ccgagggggt ttttcgtcgc catcagtcgc gcggtgctgg ggtgcaacgc
     1021 ctcaaacgcc tgggcaaaga cgatcacctc gtacgctggt ccatccgacc gcatcgagcc
     1081 cccgtatggc tcgatgcctc ggtggagttg ccctcgacgt tcatcgttcg tgaagtcagc
     1141 tttcaggtga cgcagcctgg tttccgcacg aaatcggtga cgcttgtaac cacactgttg
     1201 gatgccaaga gctatcccgc ttgggcacta gctgagcttt acttcagaag atggcggatg
     1261 gaattgtggc tgcgggacat caagatcacc atggacatgg acggcctcga tcatgggatc
     1321 ggccactttc ggcacccaag acaattaccg cactcgttca cgaggattaa aaatacaata
     1381 agtataaatt catcaaaaca ttgtaaattt tttgttgttt gagtcaaata tcggttgtgt
     1441 agtaaaatca atggttta
//
LOCUS       DASQSL010001111         1410 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_22971, whole genome shotgun sequence.
ACCESSION   DASQSL010001111 DASQSL010000000
VERSION     DASQSL010001111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1410
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22971"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..231)
                     /locus_tag="VE844_11525"
     CDS             complement(<1..231)
                     /locus_tag="VE844_11525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01955.1"
                     /translation="MTVALYTFPDGTRHVVWVRLEEVERVLHNLLILTNLPVPSATAI
                     PFLQFGTGYFYNAFAELRSTQGDRILTLKSSPL"
     gene            complement(228..>1410)
                     /locus_tag="VE844_11530"
     CDS             complement(228..>1410)
                     /locus_tag="VE844_11530"
                     /inference="COORDINATES: protein motif:HMM:NF012870.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HZC01956.1"
                     /translation="IASCQRHPTQSSSQVQEKLGSDAPSARTIQRVRKRNGIARLPKR
                     APPIAPARRIPEQVMKRARHILMLRPHLGPERVVWDVQNGEHLTISASTVKRLKRKLH
                     NALHPVPPPPPPPVWRFYERRHPHSLWHGDYMKKIKLADGSGQTAFQLTFQDDYSRGY
                     VFCDLSLKADLYTTVKGMMAAMRQWQVIPKAVLFDNGSHFRGKLLWTFCRNLGIRIIY
                     ASVHHPQTNGKLERAFQDDMRDFYRQYDQWLLDHLRHDMPSYIHYRNHVRGHQALGGK
                     PSMTRLQEHTEKAPAHILDQLESYAVYEMGRQTVRMDGSIWVLGRSAQLDARLCGQEV
                     TIYETLQGMEVKTQEGRWYLFPEYRLFRQLKCTAPWNMPASFAFERQQGYYCPLNAVA
                     S"
BASE COUNT          288 a          399 c          412 g          311 t
ORIGIN      
        1 taggggtgaa ctcttcagag ttaaaatgcg atcaccctgg gtagatcgca actcggcaaa
       61 ggcattataa aaatacccgg tgccgaattg caagaaaggg attgcagtcg cggagggaac
      121 tggtaaattt gtcaggatca aaaggttatg caataccctc tcgacctcct ccagtcttac
      181 ccacaccaca tgtcgtgttc catccggaaa tgtgtagagg gccactgtca tgaggcgaca
      241 gcatttaacg gacagtagta cccctgctgt ctttcgaatg caaagctggc tggcatattc
      301 cagggggcgg tacacttgag ctgcctgaag agccggtact ccgggaacag ataccagcga
      361 ccttcctgcg tcttgacctc catcccctgc agggtctcat agatcgtcac ttcctgtccg
      421 cacagcctcg catcaagctg ggcgctgcgc cccagcaccc agatggatcc gtccatcctt
      481 acggtctggc gccccatctc atacacagcg tagctttcaa gctgatcaag gatatgagcc
      541 ggcgcttttt cggtgtgctc ttgcagtctg gtcatcgatg gtttccctcc cagcgcctga
      601 tgcccacgga catggttgcg gtagtgaatg tacgaaggca tatcatgccg caaatgatcc
      661 aggagccact gatcgtactg ccgatagaag tcccgcatgt cgtcctggaa tgcccgttcc
      721 agcttaccgt tggtctgcgg gtggtggacc gaggcgtaga tgatgcggat gccgaggttc
      781 cggcagaagg tccagaggag tttcccccgg aaatgggagc cgttgtcaaa aagcacggcc
      841 ttgggaatca cctgccactg ccgcatggcc gccatcatcc ccttgacggt cgtgtataga
      901 tcagccttca aggacaggtc acagaagacg tacccgcgcg aatagtcatc ctgaaaggtt
      961 agctggaacg cggtctggcc gctcccatcc gcgagcttga tttttttcat gtaatctccg
     1021 tgccagagac tatggggatg gcggcgttca tagaatcgcc agacgggtgg aggcggtggc
     1081 ggcggaacgg gatggagggc gttatggagc ttgcgcttga gccgcttcac cgtggaggcg
     1141 ctgatcgtta ggtgctcacc gttctgtaca tcccacacga cacgctccgg ccccaggtgc
     1201 ggccgcaaca tgaggatatg ccgtgcccgc ttcatgacct gctccggtat ccgtcgtgcc
     1261 ggcgcgatgg gtggagcgcg cttcgggagt cgcgcgatgc cgtttcgttt tctcacccgt
     1321 tgaatcgtgc gcgcactggg agcgtctgac ccgagcttct cctgcacctg agaggaactc
     1381 tgagttggat ggcgttggca cgacgcgatc
//
LOCUS       DASQSL010001112         2512 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_186223, whole genome shotgun sequence.
ACCESSION   DASQSL010001112 DASQSL010000000
VERSION     DASQSL010001112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2512
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186223"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2245
                     /gene="clpB"
                     /locus_tag="VE844_11535"
     CDS             <1..2245
                     /gene="clpB"
                     /locus_tag="VE844_11535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011459822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HZC01957.1"
                     /translation="VLTQGLTLPTTDPPHDSLLQVLAQVRGSQRVTSPTPETTYAALE
                     KYGRDLTQLARQGKLDPVIGRDEEIRRVIQILSRRTKNNPVLIGEPGVGKTAIIEGLA
                     SRIVRGDVPEAIKDKRVIQLDMGALIAGAKYRGEFEERLKAVLKEIQEADDIILFIDE
                     LHTVVGAGAAEGAMDASNMLKPMLARGELHMVGATTLNEYRKHIEKDAALERRFQPVL
                     VGEPSVEDTISILRGLKERYETHHGVRITDPAIIAAATLSERYISDRFLPDKAIDLID
                     EAAARLRMEITSDPAELDEIKRRIMQLEIEREVLKKEKDAQSRARLEKLEQELANVNE
                     QRRSLELQLGQERELLQTVTHLKEQIDQVRLEVERAQRQQDWERAARLQYSELTRLDQ
                     ELKQAEARLQEMQRGGALLKQEVDAEDVAEVVAKWTGIPVAKLIEGEMEKLLYMEKRI
                     HQRLVDQEEAVQAVADAVRRARTGLQDVNRPIGSFLFLGPTGVGKTELARALAEFLFD
                     DEQAMVRLDMSEYQERHTVARLIGAPPGYVGYEEGGQLTEAVRRRPYSVVLFDEIEKA
                     HPEVFNTLLQVLDDGRLTDGQGRTVNFTNTVIIMTSNIGSHWIKELGIEAAQDRVMEE
                     LNRHFRPEFLNRIDEVILFQALTREHLQQIVNIQLGKIKKFLTQRHIQLEITPEAKMR
                     LAEEGFDPVLGARPLKRVIQRRIQNQLAMRILKGEIKEGDRVMVEVTPNGELVFRREP
                     AAEAVPA"
BASE COUNT          568 a          689 c          813 g          442 t
ORIGIN      
        1 tgtgttaacg caaggcctga ccctccccac gactgaccct ccccacgata gtctgcttca
       61 ggtgctcgcc caggtacgcg gcagccagcg ggtcaccagc cccacacccg agaccaccta
      121 tgccgccctg gagaaatacg gccgtgacct gacccaactg gcacgccaag gcaagcttga
      181 ccccgtcatc ggccgcgatg aggagatccg tcgcgtcatc cagatcctat cgcgccgtac
      241 caagaacaac ccggtgctga tcggcgagcc gggcgtgggc aaaacagcca ttatcgaggg
      301 cctggcgagc cgcattgtgc gcggtgatgt gcccgaggcg atcaaggaca agcgcgtgat
      361 tcaactcgat atgggcgcgc tcattgccgg cgccaaatac cggggcgagt tcgaggagcg
      421 gctcaaggcc gtgctcaaag agatccagga agccgacgat attatcctgt tcattgatga
      481 gctgcacacg gtggtcggtg cgggcgcggc ggaaggtgcg atggatgcgt ccaatatgtt
      541 gaagcccatg ctggcccgag gcgagctgca catggtcggt gcgacaacgc tcaacgagta
      601 tcgcaagcac atcgagaagg atgctgcgct tgagcgccgc ttccagccag tgcttgtggg
      661 tgagccttcg gtagaggata cgatctcgat cctgcgcggc cttaaggagc gctacgaaac
      721 acaccacggg gtgcgcatta ccgatccggc tattatcgcg gcggcaacgc tgagcgagcg
      781 ttacatctca gatcgcttcc tgcccgacaa ggcaatcgat ctgatcgatg aggcagcggc
      841 gcggctgcgc atggagatca ccagcgaccc cgctgagctc gatgagatca agcgccggat
      901 catgcagctc gagatcgagc gcgaggtgct taagaaggag aaagatgccc agagcagggc
      961 acggcttgag aaattggagc aggaactggc taatgtgaac gaacagcgcc ggtctctaga
     1021 gttgcagctt ggccaggagc gcgagctgct gcaaactgtt acccacctca aagagcagat
     1081 tgaccaagta aggctcgagg ttgagcgcgc acagcggcag caggattggg agcgcgccgc
     1141 acggctgcag tatagcgagc tcacgcggtt agaccaggag ttgaagcagg ctgaggcccg
     1201 attacaggag atgcagcgcg ggggtgcatt gctcaaacag gaggtggatg ccgaggatgt
     1261 ggccgaggtc gtcgccaaat ggaccgggat ccctgtggcg aagctcatag agggcgagat
     1321 ggaaaagctt ctctatatgg agaagcgtat tcaccagcgg ctggtggacc aggaggaggc
     1381 cgtgcaggct gtggccgacg cggtgcgccg ggcgcggacg ggcctgcagg atgtgaaccg
     1441 cccgattggc tcatttcttt tcctgggacc gacgggggtc ggcaagaccg agttggctcg
     1501 cgcgctggcc gagttcctgt tcgatgatga gcaggccatg gtccgtctgg acatgagcga
     1561 ataccaggag cgccataccg tggcgcggct catcggtgcg ccgccgggct atgtgggcta
     1621 cgaggaggga ggtcaactca ccgaggcggt gcggcggcgg ccttacagcg tggtgctgtt
     1681 tgatgagatt gagaaggcgc atccggaggt cttcaacacc ctgctccagg tcctcgatga
     1741 tgggcggctg acggacggcc agggtcgtac cgtcaacttc acgaatacgg ttatcatcat
     1801 gacctcaaac atcggcagcc actggatcaa ggaactgggt attgaagctg cccaagaccg
     1861 ggtgatggag gagctgaacc ggcattttcg tcccgagttt ctgaaccgca ttgacgaggt
     1921 catcctcttc caggccttga cccgggaaca tctgcaacag atcgtgaata tccagctcgg
     1981 taagatcaaa aagtttttga cccaacgaca catccagcta gagatcacgc cggaggcgaa
     2041 gatgcgcctc gctgaggaag ggttcgatcc ggtgttgggt gcacggcccc tcaagcgcgt
     2101 gatccagcgt cggatccaga accagcttgc tatgaggatc cttaaagggg agatcaaaga
     2161 gggcgaccgg gtgatggtag aggtgacacc taacggtgag cttgtcttcc ggcgcgagcc
     2221 ggctgcagag gccgtgccgg cataaacgat cgttgcacgc acctcctggc gcatgaatag
     2281 aaatagtaga gaaaaatcaa cggctgactt gcgcgcgtgg tagaatccag aaagaatcaa
     2341 cagcaaaggt aatagcaatg cctgcgaccg aagagcgtgt tcaagtggcc ttcccgctcc
     2401 cgcgcacagg gtatgaacgc gttgaaagag ccgctcgtga tggacaacgc tccttagacg
     2461 atgaattggc ggtactcgtg gaaagcgggc tcaacaccga gctttcccat ca
//
LOCUS       DASQSL010001113         1188 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_9241, whole genome shotgun sequence.
ACCESSION   DASQSL010001113 DASQSL010000000
VERSION     DASQSL010001113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1188
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9241"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(231..767)
                     /locus_tag="VE844_11540"
     CDS             complement(231..767)
                     /locus_tag="VE844_11540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011687781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZC01958.1"
                     /translation="MGKMRRIGLYARVSTHDQQTLPLQLATMRDYVLKRGWVIATEVE
                     DVGSGASERPRRDELLKSARRREIDAIVVWRLDRWGRSLVDLISTLQELAALQVGFIS
                     LHEALDMTTPTGRALVGMLAVFAEFERDLLRDQVKAGITQARKLGKPHGRPPTVQQRS
                     DEIRKLYARGISKREIAK"
     gene            889..>1188
                     /locus_tag="VE844_11545"
     CDS             889..>1188
                     /locus_tag="VE844_11545"
                     /inference="COORDINATES: protein motif:HMM:NF025079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4158 domain-containing protein"
                     /protein_id="HZC01959.1"
                     /translation="MPSLQDTAYPRLRTAVTARNLAEVYTPTAEEVALAHRVAHGNHA
                     KLSFLVLLKTFQRLGYFVQLREVPTPIIEHIARSLADPSDNATIGAYDESGTRRRH"
BASE COUNT          248 a          367 c          297 g          276 t
ORIGIN      
        1 gcttggccgt cttcctcctc gattcgtgat ccagattctc tatgacccgt tcccgtatat
       61 ccatcgaata ggctctcatt ggattctaaa tcccttcctc aattctggta tctccttttc
      121 aagatatcct aaaattatat agtaatcgag tgggaaccgc tataagtacg ctaaggtcga
      181 ttgggagtta cctccagcag cctccgcacg gaggtacggc tgatgcccaa tcatttggca
      241 atctcgcgct tacttatccc tcttgcatag agttttctga tctcatctga ccgctgctgc
      301 acggtagggg gtcgaccgtg tggcttgccg agcttccggg cctgggtaat gccggccttg
      361 acctgatcgc gcaggaggtc gcgctcgaac tccgcaaata ccgcgagcat tcccaccaat
      421 gcacggcctg tgggggtggt catatcgagc gcttcatgta acgagataaa ccctacctgc
      481 agcgccgcga gttcctgtag cgtactgatt aaatccacga gtgagcggcc ccatcgatcc
      541 aagcgccaga ccacaatcgc atcgatctcg cgtcggcggg cgctcttgag caactcatcc
      601 cgccgtggcc gctcactcgc ccccgagccc acatcttcga cctcggtcgc aatgacccac
      661 ccccgcttca gcacataatc gcgcatcgtg gcgagctgca gtgggagggt ctgctgatca
      721 tgggtagaga cccgtgcata gagcccaata cgcctcattt tacccatggc caaaacctcc
      781 actcgcctac ccctcgtgag agcacgattt cgcttgggct gaagtatccc gttatgatat
      841 gactaataac tatagttttt ggccgctagt ctgcaagggt ttcttatcat gcctagcctc
      901 caagatacgg cctatccgcg gctgagaacc gcggtgaccg cgcgtaacct cgctgaagta
      961 tacacaccaa cggccgagga agtggccctg gcccatcggg tcgcccacgg taatcacgct
     1021 aagctgagct ttctggtgtt actaaagaca tttcagcggt taggttattt cgtgcaactg
     1081 cgcgaggtgc cgaccccgat catcgagcat atcgcacggt cgttagccga tccctcggac
     1141 aacgccacta taggggccta cgatgaatcc ggcacccgcc ggcggcat
//
LOCUS       DASQSL010001114         1109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_76670, whole genome shotgun sequence.
ACCESSION   DASQSL010001114 DASQSL010000000
VERSION     DASQSL010001114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76670"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            263..772
                     /locus_tag="VE844_11550"
     CDS             263..772
                     /locus_tag="VE844_11550"
                     /inference="COORDINATES: protein motif:HMM:NF025677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase zinc-binding domain-containing
                     protein"
                     /protein_id="HZC01960.1"
                     /translation="MVKPFPLNNLIPLTRCNPMMAHVSRDWSVFKQIFADPWPEFQHA
                     HPRDQTSYYDDLVANMLECGNPDKMGYLAYRCHQCGQGKHLVSMSCKSSLCLRCSKVH
                     VDNWVSQVSRVLHEGVIYRHIILTVPAMFRTIFYQNASALVNALMRCGTRCLDDFYSE
                     VKGKTLKGG"
     gene            827..>1109
                     /locus_tag="VE844_11555"
     CDS             827..>1109
                     /locus_tag="VE844_11555"
                     /inference="COORDINATES: protein motif:HMM:NF016847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01961.1"
                     /translation="MIATSGGDDEVEERWEHLSLLPYERLRHKWQWHLMDTFRKTLAT
                     DEMKRLVDQCFRKYPGGLVANVQKGKVPSQYQSLASYVAKYVVSPPIAVR"
BASE COUNT          266 a          269 c          332 g          242 t
ORIGIN      
        1 cttgggagcg tgatgatggc gatacctgct catatgagca cgcgcaggca tttgagcact
       61 acaggtgcgt cctttgtaaa attgctctca aagaaaagag taaagggaag ataaaaagtg
      121 taaaaagggg cttgacaata gcggcaacat agaaggaatt tgcattttcc gattcccaga
      181 agaccctatg actcaataac aagcgggtcg gctgagggtg cccggggact agccgatgag
      241 ggttgtacga agcggttgaa tcgtggtaaa accgtttccc ctaaacaacc tgatccccct
      301 cacgcggtgc aacccgatga tggcacacgt ctcgcgggac tggagtgtct tcaagcaaat
      361 ctttgccgat ccctggcccg agtttcaaca cgcccatccg cgtgaccaga cgtcgtacta
      421 tgatgacctg gtggccaaca tgctcgagtg cggcaatcct gacaagatgg gttacctcgc
      481 ctaccgctgt catcagtgtg gtcagggtaa acatctggtg tcgatgagct gtaaatcgtc
      541 tctgtgcctg cggtgttcga aggtccacgt ggacaactgg gtaagccagg tgagccgtgt
      601 actccacgaa ggtgtgatct atcggcacat catcctgacg gtaccggcga tgtttcgcac
      661 cattttctac cagaatgctt cggcgttggt gaatgcattg atgcggtgtg ggacgcggtg
      721 cctagatgat ttttatagcg aggtgaaggg caagacgctc aagggtggtt agatcacgat
      781 catccacacg cacggacgca atggtcacga tcacccgcac ctgcacgtga tcgccaccag
      841 tggtggcgat gatgaggtag aagaacgctg ggaacatttg agtttgctgc cctacgagcg
      901 gttgcgtcac aagtggcagt ggcacttgat ggacacgttt cgaaagacac tggcgacgga
      961 cgagatgaag cgtctggtgg atcaatgttt ccggaagtat ccgggtggtc tggtagccaa
     1021 cgtgcaaaag ggcaaggtgc cgtcgcaata ccagagcttg gcgagctacg tcgccaagta
     1081 cgtggtgagt ccgccgatcg cggtcaggc
//
LOCUS       DASQSL010001115         1396 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_103285, whole genome shotgun sequence.
ACCESSION   DASQSL010001115 DASQSL010000000
VERSION     DASQSL010001115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1396
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103285"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(26..814)
                     /locus_tag="VE844_11560"
     CDS             complement(26..814)
                     /locus_tag="VE844_11560"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007355973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC01962.1"
                     /translation="MSKVSSQQRHLWLQLNAWLVYAFLYLPIGVLVLFSFSASRYSLV
                     WGGFTLDWYRRLFDDARLVQALFNSLTVATLATLLATFMGTACALALADPKRPGHSLW
                     VAWLYLPVLMPELVQGIALLMLFVLVARIPLGIGTIIIAHTVFSIAYVVLVVRTRLAG
                     LDPHLNEAARDLGASEWHIFWRITLPLIGPGILGGALLAFTLSFDDFVIAFFVTGPGA
                     STLPIEIYAMVKRGVTPEINAVATLILLISVVLIALSQRLQKSG"
     gene            complement(811..>1396)
                     /locus_tag="VE844_11565"
     CDS             complement(811..>1396)
                     /locus_tag="VE844_11565"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC01963.1"
                     /translation="YYIARTRPGRRYLLYFMVLIPLWANSLVLIYAWMILLRPSGVLD
                     QFLHAVGFGSDAPLSVLYTPWAVIVGLVYWYLPFMVYPLYAAIEKLDFSLLDAAYDLG
                     ANRLQAFWHVLLPLTWPGVITGCLLVFIESLGAFVVPDLLGGAKTLMLGNLIQQRFLS
                     IPQDWPLGAALAIVLLLAVGLSLAGYSRFSRRPT"
BASE COUNT          366 a          392 c          433 g          205 t
ORIGIN      
        1 tctcatgaat atcctcccat aaagcttatc cagatttttg cagccgttga gatagcgcaa
       61 tcaacaccac agagatgagc aagatcaagg ttgcgaccgc attgatctcc ggtgtcacac
      121 cgcgtttgac catggcatag atctcgatgg gcagggtgga tgcgcccggc cccgtgacaa
      181 agaaggcgat cacaaaatca tcgaaggaca gggtaaaggc cagcaaggcc ccgcccaaga
      241 tcccaggtcc gatgagcggc agggtgatgc gccaaaagat gtgccattca ctagccccga
      301 gatcgcgggc ggcctcgttc aagtgtggat ccagtcccgc caaccgagtg cgcacaacca
      361 ggaccacata ggcgatgctg aacaccgtat gagcgatgat gatggtgccg atccccaagg
      421 ggatacgggc gaccagcaca aacagcatca acagcgcgat cccctggacc agctcgggca
      481 tcagcacagg caaatagagc caagcgaccc aaaggctatg gccgggccgc tttggatcgg
      541 cgagcgcgag cgcgcaagca gtgcccatga aggtcgcaag cagggtggcc agggtggcca
      601 ccgtgaggga gttgaacagg gcttgaacca ggcgggcgtc gtcgaataga cgccggtacc
      661 agtccagggt aaaaccgccc cagaccaggc tgtagcggct ggcgctgaag ctgaacaaaa
      721 ccagcacccc gatcggcaga tagagaaacg cgtacactag ccaggcattg agttgtagcc
      781 aaagatggcg ctgctgtgag gagactttgc tcatgtcggt cttcgactga accgggaata
      841 gcccgcgagg ctcagcccta ccgccagcaa cagcacgatg gcgagggccg cacccagggg
      901 ccagtcttgg ggtatggata gaaaccgctg ctggatcagg ttgccgagca tcagggtctt
      961 ggccccaccc aggagatccg gcaccacgaa ggcgccgagg gattcgatga agaccaagag
     1021 acagccggta atgacgccgg gccaggtcag gggcaaaagc acatgccaga aggcttggag
     1081 gcgattcgcc ccgagatcgt aggcggcgtc gagtagactg aaatcgagct tttcgatagc
     1141 ggcgtagagc ggatagacca tgaacggcag ataccagtag acaagcccca cgatcaccgc
     1201 ccagggggtg tagagcacgc tgagcggcgc atcacttcca aagcccacgg catggaggaa
     1261 ctgatccaaa acgccgctcg gccggagcag gatcatccag gcatagatta agactaaaga
     1321 attggcccag agcgggatca gcaccatgaa atagagcaga taacgccggc caggccgcgt
     1381 tcgagcgatg taatag
//
LOCUS       DASQSL010001116         2863 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_186251, whole genome shotgun sequence.
ACCESSION   DASQSL010001116 DASQSL010000000
VERSION     DASQSL010001116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2863
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186251"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            9..1226
                     /locus_tag="VE844_11570"
     CDS             9..1226
                     /locus_tag="VE844_11570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020502895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HZC01964.1"
                     /translation="MENSEDVTVTHVLRYDAQEPIPLRAVRGSEDRAGFGVTCEATPG
                     PELSIIVPTYNERDNILELVNRLKQCLTGASWEVIFVDDDSPDGTVDRIQALSRSDSR
                     IRCIQRIGRRGLSSACVEGMLASTAPYLAVMDADLQHDENLLPQMLCLLKQGETDIVV
                     GSRYVKGGDIGEWDKSRAVISRLATRLSCLVIPAELTDPMSGFFMLRREVFVGSVRDL
                     STIGFKILLDLFASSPRKLKFKELPYQFRNRQAGESKLDSVAGWDYGMLLLDKLIGHI
                     VPVRFVAFSIVGGMGVLVHLLVLISLFELLKRPFMESQAIATYVAMTFNFTINNVLTY
                     RDRRLLGWRWLRGWISFTLICSVGALANVGIASHLYQMNTGWIPAAVAGIAVSVVWNY
                     AVTMMYTWNKLQK"
     gene            1544..>2863
                     /locus_tag="VE844_11575"
     CDS             1544..>2863
                     /locus_tag="VE844_11575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002625713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HZC01965.1"
                     /translation="MEQHVTDPTNPFAVSDGTGHTNAAMMMICFSHLRWDFVYQRPQH
                     LMARFARVMRVYFIEEPITDEGAQKPFLDVRNTPSGVTIAVPHLPVGLDADASNHAQR
                     TLLDKLCLKQGIRDPILWYYTPMAGAFSDHLRSSAVIYDCMDELSAFKFAPPALGEQE
                     RALLRRADLTFTGGYSLYETKRKQHPRVHAFPSSVDTAHFAAARGQMDEPPDQAAIPH
                     PRLGFFGVIDERMDIELLATVADLRPNWHFMMVGPIVKIDPAELPRRPNIHFVGGRKY
                     EELPAYLAGWDVAIMPFALNESTRFISPTKTLEYLAGGKPVVSTPITDVVRHYGELEA
                     VRIAKTPTELVSAVEAALANNRAPGAWLDTADRMLAQTSWDATWKHMADLIAKVWKPA
                     SKKKVENSLKGNGQHAEVPRISRLRRSQVRQRAGFDYMIVGAGFAGSV"
BASE COUNT          635 a          781 c          831 g          616 t
ORIGIN      
        1 ctacagtcat ggaaaattca gaggatgtaa cagtaacaca tgttttgcgc tacgatgcgc
       61 aagaacctat tcctttacgg gcagtgcgcg gatctgagga tcgtgccggt ttcggggtaa
      121 cttgcgaggc tacgccaggt cccgagctct cgattattgt gcccacgtat aacgagcggg
      181 acaatattct cgaattggtg aacaggctca agcaatgcct cacgggggca tcatgggagg
      241 ttattttcgt cgatgatgac tctcctgacg gtacggtgga caggatccag gcccttagca
      301 gaagcgacag ccgcatccgt tgtatacagc gcataggccg gcgaggcctt tcctccgcct
      361 gtgttgaggg aatgcttgcc agcaccgccc cgtaccttgc agtaatggat gctgatcttc
      421 agcacgacga gaacttgctc ccgcaaatgc tgtgccttct caaacaggga gaaactgata
      481 tcgtggtggg tagccgatac gttaaaggcg gagacattgg ggaatgggat aagtctcgcg
      541 ccgtaatcag ccgtcttgcc acgaggctga gttgcttagt aattccagca gagctgaccg
      601 acccaatgag cggttttttt atgctgcgac gggaggtctt tgtgggaagc gtccgcgatc
      661 tctctacgat cggtttcaaa atacttctgg acttattcgc ttcatcgcca cgtaagctta
      721 agttcaaaga attgccctat cagttcagaa atcgacaggc gggcgagagc aagctagatt
      781 ccgtggccgg ctgggactat gggatgctgt tgctcgacaa gctgatcggc catattgttc
      841 ccgttcgctt tgtggctttc tcgatcgtcg gcgggatggg tgtcttggtg cacttgctcg
      901 tcctgatctc gctattcgaa ctgctcaagc gtccattcat ggagagccag gctattgcga
      961 cgtacgtggc gatgacattc aacttcacaa taaacaatgt gcttacgtac cgtgaccgcc
     1021 gtctgctggg gtggagatgg ctccgagggt ggatttcatt cacccttatc tgcagcgttg
     1081 gcgcccttgc aaacgtcggg atagcttctc atctgtacca aatgaatacc gggtggattc
     1141 cagccgccgt cgcgggaatt gcggtcagtg ttgtatggaa ctacgcggta actatgatgt
     1201 acacctggaa caagctgcag aaatagcctg tctctatcgc actaacgccg gtggagagac
     1261 tgatcagagt gatacgagcc tgtatcctgt atcactaaat caggaatata gttaatgtga
     1321 cattgtcaag ttagttttga gagtgaaaat cggactgtta gaggaatctc atctatagga
     1381 ggccgggaat tgctgacaaa tgcttgacaa acccagagct tcggtcgaca atcaataaaa
     1441 aaatggcaag agatcggcgg cgcgaggata agccccagca gaacatggtc atcgaagcgc
     1501 aacgagtgcc tcatcgcagg tggcaggtat cttaggagga taaatggagc agcacgtaac
     1561 cgacccgacc aatcctttcg ccgtatcgga tggtactggg cataccaacg cagcgatgat
     1621 gatgatctgc ttttcgcatc tccgatggga ctttgtgtat cagcggccgc aacatctaat
     1681 ggcacggttc gcccgcgtga tgcgggtgta tttcatcgag gaacccatca cggatgaggg
     1741 cgcacaaaag ccgtttctcg atgtcaggaa cacgcccagc ggcgttacta tcgccgtgcc
     1801 gcatctgccg gtcggcctgg atgccgacgc gtcaaaccat gcacagcgaa cgctcctaga
     1861 taagctgtgt ctcaagcagg gcatccgcga cccgattctc tggtactaca cgccgatggc
     1921 cggcgcgttc tcggatcatc tgcgcagctc ggccgtaatc tatgactgca tggatgaact
     1981 gtcggcattc aaattcgcac ccccggcatt aggcgagcag gagcgcgcgc tgctgcgccg
     2041 tgccgatctc actttcaccg gcggctacag cctatatgag acgaagcgca agcagcaccc
     2101 gcgcgtgcac gcgtttccga gcagcgtgga taccgcgcat ttcgcagccg cgcgcggcca
     2161 gatggacgag ccgcccgatc aggctgcaat tccgcatcca cggctcggtt tcttcggcgt
     2221 gatcgacgag cgcatggaca ttgagctgct cgcgacagtc gccgacctgc gccccaactg
     2281 gcatttcatg atggtcggtc cgatagtgaa gatcgatccc gcggagctgc cgcggcggcc
     2341 gaacatccat ttcgtgggcg gtaggaaata cgaggaacta cctgcgtacc tcgcgggatg
     2401 ggacgtggcg atcatgccgt tcgcgctcaa cgaatcgacg cgcttcatca gcccgaccaa
     2461 gacgctagaa tacctggctg gcggcaaacc cgtcgtgtcg actccgatca cggatgtcgt
     2521 ccgtcactac ggcgaactgg aagcggtcag gatcgctaaa acgccgaccg agttggtctc
     2581 cgcggtcgag gccgcgcttg cgaacaaccg cgcgcccggc gcatggctgg acacggccga
     2641 ccgcatgctc gcgcagacct cctgggacgc aacctggaag cacatggccg atctgatcgc
     2701 caaagtgtgg aagcctgcgt ccaaaaaaaa agttgagaac tccctgaaag ggaacggcca
     2761 acacgccgag gtgccgcgca tttcccgcct gcgccggtcg caggtcagac agcgtgccgg
     2821 ctttgactat atgatcgtcg gtgcggggtt cgcgggcagc gtg
//
LOCUS       DASQSL010001117         2267 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_158803, whole genome shotgun sequence.
ACCESSION   DASQSL010001117 DASQSL010000000
VERSION     DASQSL010001117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2267
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158803"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(214..1377)
                     /gene="bioF"
                     /locus_tag="VE844_11580"
     CDS             complement(214..1377)
                     /gene="bioF"
                     /locus_tag="VE844_11580"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005958570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008710 - 8-amino-7-oxononanoate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HZC01966.1"
                     /translation="MFTFDHRLLTHLTERKARGLYRIRRAKETAQGPEIGIEGRRYLN
                     FSSNDYLSLADHPRLKQALQRGLKRYGLGSGASHLISGYSRSHQCLEEELAAFVQRPR
                     ALVFSTGYMANLGVVSALAGRGDTLIEDRLNHASLIDAAVLSRARLKRYPHVDVEALA
                     RLLPTVSHGQAYVLTEGIFSMDGDLAPLPAIASVCKDHHAVLMVDDAHGFGVLGPNGE
                     GSLGHFGLGLEEVPVLMGTFGKALGVFGAFVAGSEALIETLIQKARSYIYTTALPPAL
                     AEAIREAVAIVRTERWRCERLGELIRYFKEGARLLGLSLKPSDTAIQPVILGDTAAAL
                     HAARQLQAQGVYVAPIRPPTVPEGTARLRISLTAAHTHDQVDRLLEALGRQQF"
     gene            complement(1390..>2267)
                     /gene="bioB"
                     /locus_tag="VE844_11585"
     CDS             complement(1390..>2267)
                     /gene="bioB"
                     /locus_tag="VE844_11585"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002683125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004076 - biotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HZC01967.1"
                     /translation="LYQAHSVHRHYFEPNRVQLSTLLNIKTGGCPEDCAYCPQSTRYD
                     TGLKAEPLLEISKVKQAAERAKEKGATRFCMGAAWRSPKDRDLDRVIEMIASVRALGL
                     ETCATLGMLRLDQAIRLKQAGLDFYNHNLDTSESHYQAIFTTRTYRDRLQTLEHVRQA
                     GIAVCCGGIIGLGEGLTDRCGLLITLANLPIHPESVPINMLVRVAGTPLAEAERPDPF
                     DIIRTIAVARLLMPASTIRLSAGRTEMSDELQALGFFAGANSIFYGERLLTTDNPGVE
                     RDRELFRRLGIEPSH"
BASE COUNT          506 a          654 c          656 g          451 t
ORIGIN      
        1 agggggcatg ggctaccagt aacttggtta agagatcgag ggaatagtct ttcatgcaaa
       61 gcgggctccg gccagatcca gggagatcta tggatacggt gcgcccgtgg cgattcaagc
      121 tcgggatcag accttcccag acagtgctat tcagtcccca accatggagc agtatgatgg
      181 gtcgtccctg accccaagat tcggaataga gattcaaaac tgctgccgac ccagtgcttc
      241 cagcaggcga tcgacctgat cgtgcgtatg cgccgctgtc aaacttatcc gcaggcgggc
      301 cgtgccctca ggaacggtgg gagggcgaat gggtgcgaca tacacgccct gggcctggag
      361 ctgtctagcg gcatgcaggg cagctgctgt gtctcccagg atcacaggct gaatagccgt
      421 atccgaaggt tttagtgaca ggccgagtag gcgagcgccc tctttgaaat agcggatcag
      481 ttctcctaat cgctcgcaac gccagcgctc cgtccgcacg attgccacgg cttctcggat
      541 cgcttccgcc aacgctggag gtaaggctgt agtatagatg tagcttctcg ctttttggat
      601 cagggtctca atcagggctt cagagcctgc cacgaaggcc ccaaaaacgc cgagggcctt
      661 gccgaaggtg cccatcagca caggaacctc ctctagccct aggccgaaat ggcccaagct
      721 accctcacca ttagggccaa gcacaccaaa accatgggca tcgtccacca tcaaaacggc
      781 atggtgatcc ttgcagaccg aggcgatcgc cggcagcggt gcgagatcgc catccatact
      841 gaagatcccc tcggtgagca cataggcctg cccgtggctt acagtcggca aaagccgcgc
      901 gagggcctct acatccacgt ggggataacg cttgagccga gcgcgggaga gcacggccgc
      961 atcgatcaag gaggcatggt tcaatcggtc ctcgatgagg gtatcgcctc gcccggcgag
     1021 tgcgctgacc acaccgagat tggccatata gccggtcgag aataccaggg cccgcggtcg
     1081 ttgcacaaag gcggcgagct cctcttccaa acactgatga gagcggctgt acccactgat
     1141 aagatgagag gcgccgctgc cgagaccata gcgcttcagg ccacgctgca gagcctgttt
     1201 aagccttgga tgatcggcca gactcaggta atcgttactg gaaaaattga ggtaacgccg
     1261 cccttcgatc ccaatctccg gaccctgagc agtctctttg gcgcggcgga tacgataaag
     1321 tcccctggcc ttgcgttcag tgaggtgggt gaggagccta tggtcgaagg tgaacacccg
     1381 gcttcccagt cagtggctcg gctcgatccc aaggcgacga aatagctcgc gatcgcgctc
     1441 cacaccggga ttatccgtag tcaatagcct ttcaccgtag aagatcgagt tggcgcctgc
     1501 aaaaaaaccc agggcctgga gctcgtccga catctctgtt ctacccgccg acaggcggat
     1561 agtggaggcc ggcatgagta ggcgcgcaac cgcgatggta cgaataatgt caaagggatc
     1621 gggcctttca gcctccgcca ggggtgtacc tgcaacccgt accagcatat tgatcgggac
     1681 actctccgga tgaataggca agtttgccaa tgtaatcaat aagccacatc ggtcggtgag
     1741 accttctccg aggccaataa tgcccccgca gcacacagcg atccccgcct ggcgaacatg
     1801 ctcgagggtc tgcagccgat cccggtaggt acgggtggta aagatagctt gatagtggga
     1861 ctccgaggta tcgagattat ggttataaaa atccaggccc gcttgcttta agcggatcgc
     1921 ctgatcaagt ctcagcattc ccagggtggc gcaggtttca aggccgagcg ctctgacgct
     1981 ggcaatcatc tcgatcacac ggtctagatc gcgatccttt ggactgcgcc aggcagcccc
     2041 catgcaaaac cgagtggcgc ccttttcctt agcccgttca gcagcctgtt ttaccttgga
     2101 gatctccagc aagggttccg ctttgagccc tgtgtcgtaa cgtgtgctct ggggacaata
     2161 ggcgcaatcc tcagggcagc caccggtttt tatattgaga agcgtgctca attggaccct
     2221 attcggttcg aaatagtggc gatggacact gtgagcctga tacagca
//
LOCUS       DASQSL010001118         1061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_129847, whole genome shotgun sequence.
ACCESSION   DASQSL010001118 DASQSL010000000
VERSION     DASQSL010001118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1061
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129847"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(137..577)
                     /locus_tag="VE844_11590"
     CDS             complement(137..577)
                     /locus_tag="VE844_11590"
                     /inference="COORDINATES: protein motif:HMM:NF015365.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HZC01968.1"
                     /translation="MKICRADELEGPRGLSSEFDEMWSDVGKKAHPRWLWHANDHRTG
                     QVLAYVFGRRQDQGCLRLQALLEPFGITRYYTDGWGTYERHVDAEKHIVGKEHMQRIE
                     SKHINLRTRVKRLVRRTICFSKTERMHDLVIGLFVNRYEFGRAI"
     gene            complement(619..858)
                     /locus_tag="VE844_11595"
     CDS             complement(619..858)
                     /locus_tag="VE844_11595"
                     /inference="COORDINATES: protein motif:HMM:NF024169.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1-like element transposase"
                     /protein_id="HZC01969.1"
                     /translation="MRHGKTPQGKQRYRCRQCLDRGRTFLLDYSYPGQSPSIKEQIVD
                     MAMNASGIRDTARVLHVSPTTVIKELKKRHLIYTK"
BASE COUNT          243 a          296 c          281 g          241 t
ORIGIN      
        1 aagccatgaa ggcggcgatt gagcggcgat ttcaggagaa ggtcttttcg accaccattg
       61 ttagtgcggc gaagatccag gaagctgagt ccaccaaaaa gactgtcgaa ggtgtttcag
      121 agttgtggat ctcatgttag atggctcgcc cgaactcata acggttgaca aacagcccga
      181 tgaccagatc gtgcatacgc tccgtcttcg agaagcagat cgtgcggcgc accaaccgct
      241 tgacccgggt ccgcaagttg atgtgcttgc tctcgatgcg ctgcatgtgt tccttaccaa
      301 cgatgtgttt ctcagcatcc acatgacgct cgtatgtccc ccagccgtct gtgtagtatc
      361 gggtaatacc aaacggctcc aacagggcct gaaggcggag acagccctgg tcctgacgcc
      421 gtccgaacac ataagccaag acctgtccgg tgcgatgatc gttggcgtgc cacagccaac
      481 gcggatgcgc tttcttgccc acgtcactcc acatttcatc aaactctgag ctcagcccac
      541 gaggcccctc aagctcgtca gcacggcata tcttcacctc tctctgctcg ggcttcaagc
      601 gtgccaatac cgagtggttc acttggtgta gatcaggtgc ctttttttga gttccttgat
      661 caccgtggtg ggactgacgt gtaacacgcg agccgtgtca cgaatcccac tggcattcat
      721 ggccatatca actatctgct ctttgataga cggggattgg ccgggatagg agtagtccag
      781 cagaaaggtg cgacctcgat cgaggcactg gcggcagcgg tagcgttgct tgccttgcgg
      841 agttttgcca tgtctcacaa tatcggtccc ctggcaggag ggacagtgta ggacttgggt
      901 aaccatagca cctcgcgatc agatggatca ttcggctcct taaacacgct cagagagaat
      961 agcagatcca caactgtgaa acaccttcga aaccgtcata aaatacctcg aacccagaat
     1021 ctcggactcg gttggcaagt tcctcagcat aagagcgttc g
//
LOCUS       DASQSL010001119         1214 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_186260, whole genome shotgun sequence.
ACCESSION   DASQSL010001119 DASQSL010000000
VERSION     DASQSL010001119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1214
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186260"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(301..>1214)
                     /locus_tag="VE844_11600"
     CDS             complement(301..>1214)
                     /locus_tag="VE844_11600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017876001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YsnF/AvaK domain-containing protein"
                     /protein_id="HZC01970.1"
                     /translation="RDESFGSGVKSFFNDIFGTANRDDAELYSEAVLHGNYVLTVNVP
                     DDDLVDRATEVLDRYDPVDIEEQASKWKSGGWAAPESMRQSASTEQQSETGSTAIPVI
                     QEELKVGKRAVQRGGVRVYQRVVETPVQENVDLREERVTVERRPVDQPASPADLTAFQ
                     ERSFEVRETAEEAVVEKTARVVEEVVVGKQVTQHQEQISDTLRSTEVEVEQLSGTSVQ
                     SSSMDDDTYFRSHWNSNYASSGGSYEDYAPAYRYGSSLAGSDRYKGRRWDDMEPEVRS
                     DWESRNPGSAWEKVKNAIRHGWERMTT"
BASE COUNT          229 a          367 c          319 g          299 t
ORIGIN      
        1 gccgaacagg atgagccggt ttacatggat ccttcttgac agaagcgagc aaaatttctg
       61 aagcactgct tcgtcgattc atagtattaa gttgcgggtg tagttcaatg gtagaacatc
      121 agcttcccaa gctaatgcaa caagcccgcc ggcaaaagcg ggcgggcttg tgggggaaga
      181 attgcttaat ttactttgca gccaaagaaa tcgagaattt tggcggcttg catgcctcat
      241 ttgaaaaggg ggccgacggc gtcaaccgtc ggccccctgc gaactatcgt tgcactggcc
      301 ttaagttgtc attctttccc atccatggcg tattgcattc ttcacttttt cccaggcaga
      361 gccgggattt ctcgactccc agtcgctcct gacctcgggc tccatgtcgt cccagcgccg
      421 gcctttgtaa cgatcgctgc cggccaatga tgatccgtac cggtaggccg gcgcgtaatc
      481 ttcatagctg ccgccggaac tggcgtagtt gctgttccag tgactgcgga aataggtatc
      541 gtcatccatg ctgctggact ggaccgacgt tccggacagc tgttcgactt ccacctccgt
      601 actgcgcagc gtgtcgctga tctgctcctg gtgttgcgtc acttgcttgc caacgaccac
      661 ttcctccacg acccgggcgg ttttctccac aacggcttct tccgctgtct cgcgcacctc
      721 gaaagaacgt tcctggaacg ccgtcagatc cgccgggctg gcgggttgat cgacgggacg
      781 tctttccacc gtgacgcgct cctcgcgcaa gtcgacgttt tcctgtaccg gcgtttcaac
      841 cacgcgctga tacacacgca cgccaccgcg ttgtactgcg cgcttgccga cttttaactc
      901 ttcctggata acggggatcg ctgtcgagcc ggtctccgat tgttgctccg tactggcgct
      961 ctgtctcatc gattcgggtg cggcccatcc gccgcttttc catttcgacg cctgttcttc
     1021 gatatcgacc gggtcgtacc gatccagaac ctcggtcgca cggtcaacca gatcgtcatc
     1081 cggcacattg accgtcagca cgtagttacc gtgcaagacg gcttctgaat acagttccgc
     1141 atcatcgcgg ttggctgtgc cgaagatgtc gttaaaaaaa gatttgactc cagagccgaa
     1201 ggactcgtcc cggc
//
LOCUS       DASQSL010001120         1745 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_33267, whole genome shotgun sequence.
ACCESSION   DASQSL010001120 DASQSL010000000
VERSION     DASQSL010001120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33267"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(313..828)
                     /locus_tag="VE844_11605"
     CDS             complement(313..828)
                     /locus_tag="VE844_11605"
                     /inference="COORDINATES: protein motif:HMM:NF014668.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein RecX"
                     /protein_id="HZC01971.1"
                     /translation="MEPDTQTMDRAKRQAYRYLAYRSQTVRELRDRLQRRGYTVEVID
                     HVLRDLEAEGYVDDHKFALNWARYRLQNKPMGRRRLAWELQQRGVPSESVEEVLRDVY
                     SESNEVTLAQQAARKRLGSNELPCSPRERQRYARHLFSLGFDADTIAAALAAISPSMA
                     ALDVVSDDDQC"
     gene            complement(831..>1745)
                     /gene="recA"
                     /locus_tag="VE844_11610"
     CDS             complement(831..>1745)
                     /gene="recA"
                     /locus_tag="VE844_11610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HZC01972.1"
                     /translation="GVGGIPRGRVTEIYGPEASGKTTIALHIIAEAQKAGGIAAFIDA
                     EHALDPVYAQKLGVKTGELLISQPDTGEQGLEIAETLVRSGAVDVVVIDSVAALVPKA
                     ELDGEMGDPQMGLQARLMSQALRKLTGIISKSKTAMVFLNQIRQKIGMFVGNPETTTG
                     GNALKFYASVRLDIRRINQVKEGEEVTGSRVRVKVVKNKVAPPFRQAEFDIMYGEGIS
                     REGDLLDLAAERGLITKSGAWYSYHEERIGQGRENAKKYLRENTALTIELDAQLRREL
                     GLGRGSPGETEQSKEVGGNRRDQNSGER"
BASE COUNT          340 a          538 c          462 g          405 t
ORIGIN      
        1 cgcctcagcg ggcaactttt gtgcggtgag atcctcctcg gccacgctca ttcctcagcg
       61 gtttaatggc atggctaggc gctccaggct ttctaattcc agcgcagcgg cgagcaagat
      121 atgcgcttct tccacagaag ctttcggact cgcagcaata gagatctctt cgacaattca
      181 ctgctcaagt gacatgcggg tagacgccgc ctcggccatg agttactcat gggttttatc
      241 gggccagtgc atgacgatct ctggcatgat ccgcacctct cacgatagca tggtcggaaa
      301 cacgtggaaa gttcagcatt ggtcgtcatc ggaaacgaca tccagcgcgg ccatggaagg
      361 ggagatggcc gcaagagcgg ccgcaatggt atcggcatca aaacctaggc tgaagagatg
      421 gcgggcgtac cgctgacgtt cacgaggcga acagggcaac tcgttagagc caagacgttt
      481 gcgagcggcc tgctgagcaa gtgttacttc gttagattcg ctgtagacgt cgcggagaac
      541 ctcctccacc gactcggaag gcacaccgcg ttgctggagt tcccacgcta agcgcctccg
      601 tcccataggc ttgttctgca ggcggtaacg agcccagtta agagcgaact tatgatcgtc
      661 cacatacccc tcggcttcca ggtctcggag aacgtggtcg atgacctcaa ctgtgtatcc
      721 ccgccgctgc agacggtctc gtaattcacg aactgtttga ctgcgatagg caagatatcg
      781 gtatgcctgt cgcttggcgc ggtccattgt ctgggtatct ggctccatgg ctaacgctcg
      841 cccgagtttt ggtctcgccg attcccccca acctcttttg attgctcggt ctcccccggc
      901 gagccgcgcc ccaaaccgag ttcacgtcgc aactgtgcat cgagttcgat ggtcagtgcc
      961 gtgttctccc tgaggtactt cttcgcattc tcccgcccct gtccaatgcg ctcctcgtga
     1021 taagagtacc acgcgccact cttcgtaatg agcccgcgtt cggccgccag gtcgaggagg
     1081 tcgccttcgc gcgaaatgcc ctctccgtac atgatgtcaa attcggcctg tcggaatgga
     1141 ggagccacct tattcttgac caccttcaca cgcacacggc tccccgtgac ctcctcccct
     1201 tctttaactt gattgatgcg cctgatatcc agacgaaccg aggcgtagaa cttcagcgca
     1261 ttgccgcccg tggtggtctc agggttcccg acaaacatcc cgattttttg ccgaatttgg
     1321 ttgaggaaca ccatcgcggt ctttgacttg ctaataatgc cggtcagctt ccgcaaggct
     1381 tgcgacatca ggcgtgcttg caatcccatc tgtgggtcgc ccatttcgcc atcgagttcc
     1441 gctttcggta cgagtgctgc aacggaatcg atgaccacga catccactgc gccactgcgc
     1501 acaagcgttt ctgcgatctc cagcccctgt tcaccggtat caggttgcga gatcagtaat
     1561 tcaccggttt taacccccaa tttctgcgca tatacagggt cgagcgcgtg ttcggcatcg
     1621 ataaacgcgg cgattccgcc ggccttttgc gcctcggcga taatatgcag cgcgatggtg
     1681 gttttgccgg acgcttccgg cccataaatc tctgtcaccc ggccgcgcgg aatacctccc
     1741 acgcc
//
LOCUS       DASQSL010001121         1571 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_196550, whole genome shotgun sequence.
ACCESSION   DASQSL010001121 DASQSL010000000
VERSION     DASQSL010001121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196550"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..787
                     /locus_tag="VE844_11615"
     CDS             <1..787
                     /locus_tag="VE844_11615"
                     /inference="COORDINATES: protein motif:HMM:NF025001.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZC01973.1"
                     /translation="KCLIWDLDMNCGSTRHFGIPAEMPLLGCAEVLTGAEEPLDVIVS
                     NGELEGIELPDNVNLLPARRNLESIDATLTVRYKFGNPKDILRPIVDSLRPHFDYIFL
                     DTAPNLTIPTVAAYKAADYFLLTAIPEPLAVDGLRDALDDIVTVRKQGNESLRLVGVV
                     MSAIKGRITRVQRELLHYIEKTFNRASDPFIRSYRSTISETTYVCEVQKLGRTMFQVY
                     PTHKVTEQYRELAREFEARLDALEQGKPLDDTHADEAKEVMHG"
     gene            780..1292
                     /locus_tag="VE844_11620"
     CDS             780..1292
                     /locus_tag="VE844_11620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01974.1"
                     /translation="MAKLAEKGERTFSPIADKLIEAVSSPQVLPPGPTEEAPPERKVV
                     PMRREEEGTTHQQPPQEPPLVDPSFGKRLSLVMRYHVSDEEKQETEKFVHRVSQAAEV
                     AITHSNLMRACRDLLFQVEDRLTLELSRAKLKRPINDKQAIAFFESRLTEIIHTAIRQ
                     SPLPYARGGK"
BASE COUNT          371 a          470 c          417 g          313 t
ORIGIN      
        1 gaagtgcctc atttgggacc tcgacatgaa ctgcggttcg acgcgccact tcggtatccc
       61 tgctgagatg ccgcttcttg gctgcgcaga ggtgctcacc ggggcagaag aaccgctcga
      121 tgtcatcgtc tcaaatggcg agcttgaagg gatcgagctt ccagacaacg tgaatcttct
      181 ccctgcacga agaaaccttg agtccatcga cgcaacgctt accgttcgct acaagtttgg
      241 aaacccaaaa gacattctcc gcccgatcgt tgacagcctc cggccgcact ttgactacat
      301 cttccttgat accgccccaa acctcaccat cccaaccgtt gctgcctaca aagccgccga
      361 ttactttctc ctcactgcta ttcccgagcc ccttgccgtc gatggccttc gcgatgcgct
      421 tgatgatatt gtcacggtga gaaaacaggg gaacgaatcg cttcgcttgg taggcgtcgt
      481 gatgtcagcc attaagggac gaatcacacg ggtccagcgg gagcttcttc actacatcga
      541 gaagacgttt aaccgcgcaa gcgacccatt tatccggagc tatcgatcga ccatcagtga
      601 gaccacctac gtctgcgaag tgcaaaagct cggccgtacg atgttccagg tctatccgac
      661 acataaagtg acagagcagt atcgcgagct cgcccgcgag tttgaagccc gcttggatgc
      721 gcttgagcaa ggaaagcctc tcgatgatac gcacgcagac gaagcgaagg aggtcatgca
      781 tggctaagct cgctgagaaa ggggagagga cctttagccc catcgccgat aaactcattg
      841 aagccgttag ctctcctcaa gtccttcccc ctgggcccac cgaggaggca cctcctgaga
      901 gaaaagtggt cccgatgcgc cgtgaggagg aaggaaccac tcaccagcag ccccctcaag
      961 agccacccct tgtcgaccct tctttcggga agcgtctatc ccttgtcatg cgctaccacg
     1021 taagcgatga agagaagcag gagacagaaa agttcgtcca ccgggtctct caggcggcag
     1081 aggtggccat cacccacagt aacctcatga gggcctgtag agacctgctc ttccaggtcg
     1141 aagataggct taccttggag ctaagccgcg cgaagctcaa gcgccccatc aacgacaagc
     1201 aggcgatagc gttcttcgag tcacgcctca ccgaaatcat ccataccgcc atccggcaga
     1261 gcccgcttcc ttacgccagg ggaggaaagt aggggagggg gttgtgtcag aacttacgcc
     1321 accttggctt ttcggggcat gacaggtaga ctcactccgg tgaaaggagg acgagcatgc
     1381 catgcccata ctgtcagtca actgccacga ctgagcgccc tgagcggacg gcattaggga
     1441 cctgcaggag ggaagctgcg acgggaccta ataggacgat atgaggggct gtcgatattt
     1501 cccttttaac gctctgccct ggcagttcgc cttgaaaatc acctgacaag tcgcttctcg
     1561 cgactccaac g
//
LOCUS       DASQSL010001122         1099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_48305, whole genome shotgun sequence.
ACCESSION   DASQSL010001122 DASQSL010000000
VERSION     DASQSL010001122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48305"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(131..871)
                     /locus_tag="VE844_11625"
     CDS             complement(131..871)
                     /locus_tag="VE844_11625"
                     /inference="COORDINATES: protein motif:HMM:NF014625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L deacetylase family protein"
                     /protein_id="HZC01975.1"
                     /translation="MLKISDEFLANQRILVISPHADDETYGCAGTIARAKSLGGEVYV
                     ILVSVADLAHYGDTDEGVRSTVVSHRTRLEEFNAVMHYLKVDDWEVLFTDAETHLGLD
                     ALPRKKLIRLLESDARLSIDTLQPTMVLLPAVSYNQDHEALFRAGLTATRPGAPGQKY
                     TVPFVLTYDNTSLFWSGETSRFHPNVYIDVSEFLDMKISALRMHASQVRGALYHGSPE
                     GLELMTRARGREVSVEAAEGFCLLRGLF"
BASE COUNT          233 a          321 c          303 g          242 t
ORIGIN      
        1 caaaccgtat gctcccaatc gtcatccata gtgtgaagct gaagcccagc aggaaaagta
       61 ctgccagcca ctgcatgact acagatcatc ctccccctgg cgtgcactcc ctacgcgtcg
      121 atatggcttc ttaaaaaagt ccgcgcagca gacagaaccc ttctgcggct tccacactga
      181 cttcgcgtcc acgcgcccgt gtcatgagct cgagaccttc aggacttccg tggtacagtg
      241 cgccccggac ctgcgaagca tgcatcctca acgcactgat cttcatatcg aggaattctg
      301 aaacatctat gtagacgttc ggatggaaac gcgacgtttc tcccgaccag aacaacgagg
      361 tattatcgta ggtgagtacg aacggcactg tgtacttctg cccgggggcg cccggtcgag
      421 ttgccgtcag acccgctctg aaaagcgctt catgatcttg attgtagctg actgcaggaa
      481 gcagcaccat cgttggttgc agtgtatcga tcgatagccg tgcatccgat tccaagagcc
      541 gaatcagctt cttcctcggc aaggcatcga ggccgagatg tgtctcggca tcagtgaaga
      601 gaacttccca gtcatcgact ttgagatagt gcatgactgc attgaactct tcgagtcgtg
      661 ttcgatggga cacgaccgtg ctccgcacgc cttcgtcagt gtcgccataa tgggctagat
      721 cggccactga gacgagtatg acgtacacct cgccgccgag tgacttggcc cgcgcgatcg
      781 taccggcaca cccgtaagtc tcgtcgtcgg cgtgcggtga gatgaccagg atacgctggt
      841 tggcgagaaa ctcatcggag attttgagca tcgttattca cctcacgtgc aacccgacac
      901 ggcgcgatcc gagtcgggag gtcggatcag tggttcttct tcgctggtcg attagccaca
      961 tgtggactct gccttgagct gatgatcgat gacgctcgat aggatctcgt cgagccccag
     1021 ctgcgggtcg aacccgatta gttcgcgggc ccgggagacg tcggggactc gccggctcat
     1081 gtcctcgaat ccctcgggg
//
LOCUS       DASQSL010001123         1467 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_196564, whole genome shotgun sequence.
ACCESSION   DASQSL010001123 DASQSL010000000
VERSION     DASQSL010001123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1467)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1467)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1467
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196564"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..699)
                     /locus_tag="VE844_11630"
                     /pseudo
     CDS             complement(139..699)
                     /locus_tag="VE844_11630"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            complement(720..1229)
                     /locus_tag="VE844_11635"
     CDS             complement(720..1229)
                     /locus_tag="VE844_11635"
                     /inference="COORDINATES: protein motif:HMM:NF024980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HZC01976.1"
                     /translation="MPHIDYPNVITESPELLHELEKRHRYTHLFQRVRMLRLLKSGEC
                     SNLGGAADALGYSRRQCQRWWGAYTEGGLDELLVSRVDERGRQEFVTEKAWEELEVVM
                     KEGRIATYAQARDFLAERGVEYASADSVGQLFGRRKVKLKTGRPRHEKADTEEQEAFK
                     KSLPRRSAS"
BASE COUNT          307 a          458 c          392 g          310 t
ORIGIN      
        1 agttggagat ggcagtcaag atgctctgct cggatggccg cgcgcggttc gtcatgatcg
       61 cccgcgacat cacgagcgca aaaaggcaga ggaggagcgc caccgggctg aaggagagct
      121 agcttatacc gatcgagatc attgatggca caacgcatcg atggtctccg tccaccaaga
      181 aaagccggtt aagctccgca aatgggtagg ctcttcccag tagggctcga gtactcgcgt
      241 cagtgcatct tgcagtgatt cgatggtctc gaaaactctg ttggccaggg tccgcctgaa
      301 ctcctggaac catctctcta ccggattcaa ttcgggagaa taggaaggta gcgccaggag
      361 gctgacgttc tctggcaact ctacctcttt ggaggtgtgg ctcggggcgc catcgagcac
      421 cacaaccagc cgatgatcgg catagatctc accgaggtgc ccaaggaact cctcgaaaca
      481 catcccatcc atgcccggca agtaaaggca gaaactctcg cctgtggtgg gatcgaccgc
      541 ggcgtagagg taggtccact cgtaggtgcg gctgacgacg tagggcggac gaaagccttt
      601 cgggcagtat cgtcttctgt gccacttgat cagtccaaag cgcgcctcat caaaggctaa
      661 gaccttaagc gctttgttcg cggactcaga ggactcgcgc tcgtcgtcgc tggcttcgcc
      721 tacgacgccg accttctcgg caaacttttt ttgaaagctt cctgctcttc ggtgtcagcc
      781 ttctcatgcc gaggccgacc cgtcttgagc ttcaccttgc gccgcccgaa aagctgcccc
      841 acgctgtcgg cactggcgta ctcgacacct cgctcggcca gaaaatccct tgcctgagcg
      901 taggtggcaa tcctcccctc cttcatgacc acctcaagct cttcccaagc cttctcggtg
      961 acaaactcct ggcggcctcg ctcatctacc cggctcacaa gcagctcatc cagaccgcct
     1021 tcggtgtagg cgccccacca cctctggcac tgacgccggc tgtaacccag agcgtcagca
     1081 gcccctccta gattcgaaca ctcccccgac ttcagaagcc tcagcatcct cacccgctgg
     1141 aacaggtggg tgtagcgatg gcgcttttcc aactcgtgta gcagctcggg gctttccgtg
     1201 atcacgtttg gatagtctat gtgtggcatg gcttcattgt gccatcaaca aaccggatcg
     1261 gtatcagacc ttgaccgctc gctcgccttc tactaagaag ccatcgtggt cagctagtct
     1321 cacgggtaga ggaccggggc tatgcggaac ttcggagaat tcttcttcca gaaaccgtat
     1381 gaaaagcctc aggcatgggc caaacgtctc gccatcaacc gtgtcatcga cgcgtagacg
     1441 aacgcttcac ccgtggcgca tagcttc
//
LOCUS       DASQSL010001124         2419 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_186304, whole genome shotgun sequence.
ACCESSION   DASQSL010001124 DASQSL010000000
VERSION     DASQSL010001124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2419)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2419)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2419
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186304"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(63..401)
                     /locus_tag="VE844_11640"
     CDS             complement(63..401)
                     /locus_tag="VE844_11640"
                     /inference="COORDINATES: protein motif:HMM:NF025178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HZC01977.1"
                     /translation="MPEYVTVAQASAVPAGMGTIVTVKGQEIAVFNVQGKFYALDNRC
                     PHQDYPLGMSPVFDNHVLCIGHAWRFDIKTGECYSVPGVSVRTYEVLVEGDEVKIRDD
                     AIPGGETRHR"
     gene            686..1174
                     /locus_tag="VE844_11645"
     CDS             686..1174
                     /locus_tag="VE844_11645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017889026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine-specific kinase"
                     /protein_id="HZC01978.1"
                     /translation="MELLTVKLDKPDEINLILGQSHFIKTVEDLHEALVTSVGGIKFG
                     LAFCEASGPCLVRSSGTDPELVALAQRNALDLAAGHAFLILLRNAFPINVLNAVKNVP
                     EVCHIFCATANPVEVIIAETEQGRGIVGVVDGFKSKGLETATDIDERTALLRRFGYKL
                     SR"
     gene            1235..1663
                     /locus_tag="VE844_11650"
     CDS             1235..1663
                     /locus_tag="VE844_11650"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZC01979.1"
                     /translation="MAEQHDAGQAIREWFQILERSVRQVDYQTMRQHFAPDVLSFGTR
                     ADVVSGLDALVANQWSGIWPNIRDFTINFEQLHWGASGDLAWGIAPWDSIGYQPDGTS
                     FPRPGRATVLFERRHGVWLAIHTHFSLFPGTPQTTHGPRG"
     gene            1793..2308
                     /locus_tag="VE844_11655"
     CDS             1793..2308
                     /locus_tag="VE844_11655"
                     /inference="COORDINATES: protein motif:HMM:NF016840.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZC01980.1"
                     /translation="MDEAIQLAIEMSEANWNNFKNDVKGLTADELNWRPLPHGNNINV
                     LVRHVRGVEELVLSRLEQGAQSPYKDAASVQIFTDAIAHDFEQNMKALEDLHNRFISV
                     LRSTTLAELRRKTFVTPFAQGPQPASALLLNEISHLATHRGQIRTIRNLYRKARGEQG
                     LFLPQNPTFGE"
BASE COUNT          475 a          732 c          707 g          505 t
ORIGIN      
        1 catggcgctt ggcgagccgc acagggaaac tctcacggct agcgtggtcc ctgtgcagcc
       61 gatcaacggt gtcgagtttc tccgccgggg atggcatcgt cgcgtatctt gacctcatcc
      121 ccctcgacga ggacttcgta cgttcgtacg ctcacgcctg gcaccgagta gcattccccg
      181 gtcttgatgt caaagcgcca ggcatgtcca atacagagaa cgtggttgtc aaagaccggg
      241 ctcataccga gcgggtagtc ctggtgcggg cagcgattgt ccagggcgta aaatttcccc
      301 tggacgttga acacggcgat ctcctgtccc ttgacggtga cgattgtacc catcccggct
      361 ggtaccgcgc tcgcctgcgc aacggtgaca tattcaggca tgattggccc ctcacctcat
      421 ttccaactgt ttgcgtggga gatgagttgt attaccatgc tggggccgtc cgggtcaatc
      481 cttccaccca gtgctttccc cccgcgctag cctgttgacc gtggcaccac gccatggggt
      541 gcccccctcc gcgcttgacc gccgcaggta tctatgctac aagtgcagtg gccaacggga
      601 gagctcaatg gagcctacac gcaccccttt tcacccctca tgacgcctcc cggcaagtac
      661 gcgtgctgta tggagacaac cgaggatgga actcttgact gtcaagctcg acaagccgga
      721 tgagatcaat ctcatcctcg gccaatcgca ctttatcaaa acggttgagg atctgcacga
      781 agcgctggtg actagtgtcg gcggcatcaa gttcgggttg gcgttttgcg aggcctcggg
      841 tccgtgcctc gtgcgcagca gcggcaccga ccccgagctc gttgcattgg cgcagcgcaa
      901 cgccctcgat ctcgccgccg gtcacgcctt cctgatcctg ttgcgcaatg ccttcccgat
      961 taacgtgctc aacgccgtga aaaatgtccc ggaggtctgc catatcttct gtgccaccgc
     1021 caacccggtc gaggtcatta ttgcggagac cgagcagggg cgtgggatcg tcggtgtggt
     1081 cgacggcttt aagtctaagg gccttgaaac cgcaacggac atcgacgagc ggacagcctt
     1141 actgcggcgg tttggctaca aactgtcaag gtagggtcac cagatgtcgt atgctcgact
     1201 gggcacatct cgaaaggcag ccaggggaaa gccgatggca gaacagcacg atgcggggca
     1261 ggccatccgc gagtggttcc agatcttaga acgttccgta cggcaggtgg attaccagac
     1321 gatgcggcag catttcgcac cagacgtgct gtcctttggc acacgcgccg atgtcgtctc
     1381 cggcctcgac gccctcgtcg ccaatcagtg gtcggggatc tggccgaata tccgcgactt
     1441 tacgatcaat ttcgagcaac tccattgggg cgcttcaggg gacctggcgt ggggtattgc
     1501 gccgtgggac tcgatcgggt accaaccaga cggcacatcc ttcccacgac ccgggcgggc
     1561 gacggtgctc tttgagcggc gtcatggcgt gtggttggcc atccataccc acttctctct
     1621 cttccctggg acacctcaga cgactcatgg ccctcgaggg taaatcgctc gctcgccttt
     1681 ccttacggtg ccatgcatct gtctctttac gcgtccgcag acctctctcc gtgacgtgac
     1741 tgcggtgcga cacctgagct ctcagaaggg ctttttatag cgggggggga tcatggatga
     1801 ggcgattcag ctcgcgatcg aaatgagtga ggcgaattgg aacaacttca agaacgatgt
     1861 taaaggcctg acggccgatg agctcaactg gcggcccctg ccgcacggga ataacattaa
     1921 cgtcctggta aggcacgtgc ggggcgtcga ggagctcgtc ctgtcgcgct tggaacaggg
     1981 cgcacagagt ccctataaag acgcggcgag cgtgcagata ttcacggacg ccatcgcaca
     2041 tgatttcgag cagaacatga aagcgctgga agacctgcac aaccgcttta tctcggtgtt
     2101 acggtccact accctggcgg aattgaggcg caagacattc gtaacaccat ttgcgcaggg
     2161 gccacagccg gcgagtgcgt tgctcctcaa tgagatcagc cacctggcga cgcaccgggg
     2221 ccagatccgg accatccgca atctctaccg taaagcgcgt ggggaacagg ggttatttct
     2281 gccgcaaaac ccgaccttcg gagagtagtc gcacatgggt tacattccct tctcccgccg
     2341 ggcttgtcat gacccccatc ttggcgagtg cttgcagagt agaagggtct gcccccaccg
     2401 agggggatca tttcccttc
//
LOCUS       DASQSL010001125         1037 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_196575, whole genome shotgun sequence.
ACCESSION   DASQSL010001125 DASQSL010000000
VERSION     DASQSL010001125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196575"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(69..>1037)
                     /locus_tag="VE844_11660"
     CDS             complement(69..>1037)
                     /locus_tag="VE844_11660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012641848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZC01981.1"
                     /translation="RWTGIPVSRLMEGEVQKLLHMEERPHQRGVGQEEAIRSVSNAIR
                     RARANLQDPNRPLGTFIFLGPTGVGKTELARALAQFLFDDEAAMVRLDMSEYMEKHTV
                     ARLIGAPPGYVGYEEGGQLTEAVRRRPYSVVLFDEIEKAHPDVFNVLLQIMDDGRLTD
                     GHGRTVDFKNSVVIMTSNIGSQWINQPGLDYEEMQERVMGAMRSHFRPEFLNRVDEII
                     IFHALTKEHLKEIVDIQLHQVQKRLAERHIELELTEAVKEFLIEAGYDPVYGARPLKR
                     TIQQKILDPLAVSVLAGEFHEGDVVHVDKQGDSLVFKSPVEAELVA"
BASE COUNT          211 a          326 c          263 g          237 t
ORIGIN      
        1 aaagtagcta ttacaaatag ttggagggcc agcgttgtcc tgaccctccg actatcgtcc
       61 atcaggcttt aagctaccag ttcagcttct acgggagact tgaacaccag gctatctccc
      121 tgcttatcaa catgaacaac atctccttca tggaactctc cagccagtac actaacagcc
      181 agcgggtcca gaattttctg ctggatggtc cgcttcaagg gccgagcccc atataccggg
      241 tcgtatccgg cctcgataag gaactcctta acagcctcgg tcagttccag ttcaatgtgc
      301 cgctcagcca gccgcttctg gacctggtgc aactggatgt ccacgatctc ttttaagtgc
      361 tccttggtca gagcatggaa tatgataatc tcatccaccc ggttcagaaa ctcaggccgg
      421 aagtgggagc gcattgcccc catcacccgt tcctgcatct cctcgtagtc caggccaggc
      481 tggttaatcc actgggagcc gatgttactg gtcatgatga ccacgctatt cttgaaatcc
      541 acagtacgcc catggccgtc ggtcagccgc ccgtcgtcca ttatctggag caggacattg
      601 aacacgtccg gatgggcctt ctcaatctcg tcgaagagca ccaccgaata gggccgccgc
      661 cgtactgcct cggttagctg tccgccttct tcataaccta catagccggg tggggcgccg
      721 atgagccggg ccacggtgtg cttctccatg tattcagaca tgtccagacg caccatggcg
      781 gcctcatcat cgaagaggaa ctgggccaga gcgcgggcca gttctgtctt cccaaccccg
      841 gtgggaccta ggaagataaa ggtccccaag ggccggttgg ggtcttgtaa gttggcccgg
      901 gcccggcgga tggcattgct caccgaccgg attgcctcct cctgacccac tccccgctgg
      961 tgtggccgtt cctccatgtg gagcagtttc tgtacctctc cttccatcaa ccggctcacc
     1021 ggtattccag tccaacg
//
LOCUS       DASQSL010001126         1073 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_23089, whole genome shotgun sequence.
ACCESSION   DASQSL010001126 DASQSL010000000
VERSION     DASQSL010001126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1073
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23089"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..402)
                     /locus_tag="VE844_11665"
     CDS             complement(<1..402)
                     /locus_tag="VE844_11665"
                     /inference="COORDINATES: protein motif:HMM:NF020035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01982.1"
                     /translation="MDLTECEREPIHVPGAIQPHGILLSLRESDLAITQVSVNALDVL
                     GVDAQNLLRQPLMQFIDDECMAHLRDALGLKNVAVVNPIRVELRNGQGPGFDGILHRH
                     SGALIFELEPRRTRDERYVQNATSNIGGALEL"
     gene            complement(411..1013)
                     /locus_tag="VE844_11670"
     CDS             complement(411..1013)
                     /locus_tag="VE844_11670"
                     /inference="COORDINATES: protein motif:HMM:NF013306.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biliverdin-producing heme oxygenase"
                     /protein_id="HZC01983.1"
                     /translation="MLALKQGTRTYHDALERKMAPLLGTISIHTYIALLQKLFGFYKP
                     LEERIAALPGWHNLPVDLGRRQKAPLLARDLLWLKVTQPQLSQLPRCERLPEVKSITE
                     ALGCLYVLEGATLGGQIIGRHLKENLALDEDRGCAFFCSYGDEVGLMWKSFRETLSSY
                     CSKHERTEEEQLVTSACETFVSLDYWLFEGGRAEWLTENR"
BASE COUNT          221 a          307 c          292 g          253 t
ORIGIN      
        1 gagttctagg gcacctccga tgttactggt ggcgttctgt acgtaccgct cgtctcttgt
       61 cctgcgtggc tccagctcga agatgagggc accgctgtgt ctatgaagga tcccgtcgaa
      121 accaggtccc tgaccgttgc ggagttctac acgaatggga ttaacaacag caacgttctt
      181 tagacccaac gcgtcacgta gatgggccat gcactcatca tctatgaatt gcatcagagg
      241 ctgccggagc aggttttgag catcgacgcc aagaacatcg agtgcgttga cactaacctg
      301 ggtgatggcc agatccgatt ctcttagact aagtagtatc ccatgaggtt gtatggctcc
      361 gggtacgtgt atcggttccc gctcgcattc tgttaggtcc acggcccagg ctaccggttc
      421 tccgtcagcc actctgcacg ccccccttcg aacagccagt agtctagcga gacgaacgtc
      481 tcgcacgcgg acgtgacgag ctgctcttcc tcggttcttt cgtgcttcga gcagtaggag
      541 ctcaaggtct cccgaaaaga tttccacatc agcccaacct cgtccccgta gctgcagaag
      601 aatgcgcacc ctctatcctc gtcaagggca aggttttctt ttaggtgccg gccaataatc
      661 tgaccgccaa gggttgcccc ttctagcacg tacaaacagc cgagggcctc ggtgatgctt
      721 ttgacctcgg gcaagcgctc gcaccgtggc aactggctga gttgaggctg ggtcaccttc
      781 agccagagca ggtcccttgc caggagagga gccttttgcc gccgtcccag atcgactggt
      841 agattgtgcc agccagggag cgcggcgatc cgctcctcaa gaggcttgta gaaaccgaat
      901 agcttctgga gcagggcgat gtaggtatgg atagatatag tgcccagcag aggggccatc
      961 ttgcgttcca gcgcatcatg gtaagttctg gtcccctgct ttaaagccag caaatagtca
     1021 actttcttta ccgaagttgc ttagtgtcag tcgccgagtt cctctctgag cct
//
LOCUS       DASQSL010001127         1190 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_186348, whole genome shotgun sequence.
ACCESSION   DASQSL010001127 DASQSL010000000
VERSION     DASQSL010001127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186348"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..235)
                     /locus_tag="VE844_11675"
     CDS             complement(<1..235)
                     /locus_tag="VE844_11675"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HZC01984.1"
                     /translation="MKTGLIGLGAMGMPMALNLHKAGYLSVVWNRTRAKASEFAAQTG
                     VLMAETAAQLAACSEFILISVSRDNDLSEIIEAL"
     gene            333..1019
                     /locus_tag="VE844_11680"
     CDS             333..1019
                     /locus_tag="VE844_11680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018623506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HZC01985.1"
                     /translation="MDRLEIVATQRAVVLDSPGEHTATVIWLHGLGANGHDFEPIVPE
                     LDLPPRYGIRFVFPHALSRPVTINSGFIMPAWYDIRDSDLSKGEDTQGIQDSARIING
                     FIGAEVNAGIPSTRIVLAGFSQGGAMALYCGLRYPETLAGILALSTYLPLPKQLAQEA
                     HPANRAVPIFMAHGLADPLIPVYQGWQSCTLLKALGYPVVWRDYNMQHAVCPLEIADI
                     GTWIKARLID"
BASE COUNT          264 a          358 c          297 g          271 t
ORIGIN      
        1 gtaaagcctc gatgatctcg ctcagatcat tgtcacgcga gaccgagatg aggataaact
       61 ctgaacatgc ggcgagctgt gctgccgtct ctgccatgag cacacccgtt tgtgcggcaa
      121 attcactggc tttagcgcgg gtacggttcc atacgacgct gagataccct gctttatgga
      181 ggttcaaagc cataggcatc cccatggcgc caagtccaat gaggcctgtt ttcataagct
      241 tacgttcctg atagtctaat atttttaaag tatggattat gctttaaact cctaaagtaa
      301 aacacaggct ataggatcgc tactcaatta ctatggaccg acttgagatt gtcgccaccc
      361 agcgcgccgt ggttctcgac tctcctggag aacacaccgc cacggtgatt tggctgcacg
      421 gcttgggcgc caacggtcat gattttgaac ccatcgtgcc tgagctcgat ctacccccgc
      481 gctacgggat ccggttcgtg ttcccccatg ccctatcccg gcctgtgact atcaatagcg
      541 gatttatcat gccggcctgg tatgatatca gggatagcga tctcagcaag ggtgaagata
      601 cgcaagggat acaggattca gcgcggatca taaatgggtt cattggcgca gaggtcaacg
      661 cgggcatccc ctctacccgc atagtactgg caggattctc tcagggtggg gccatggctt
      721 tgtattgcgg gctgcgttat cccgagaccc tcgccgggat cctagcgctt tccacctacc
      781 tacccttgcc caagcagctc gcgcaagaag cccacccggc caatcgtgcg gttccgatct
      841 tcatggctca cggacttgct gatcccctta ttccggttta tcaaggctgg caatcctgca
      901 cgctgctcaa agcgctcggc tatcccgtcg tatggcgcga ttacaacatg cagcatgcag
      961 tctgcccgct ggagatcgcc gacatcggca cgtggatcaa agcccgctta atcgactaac
     1021 cgaccgaagc aacgctacgc atatgaacaa tagctataac acccacacga ccctaaaagt
     1081 gggcggcacc gaaatgtcag caggctgccc tgcgtcccgg gaccttcgcc acccgtccaa
     1141 gctgcctcaa ctggttcttt acccagctgt agctacgtcc accgccatcg
//
LOCUS       DASQSL010001128         1134 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_186368, whole genome shotgun sequence.
ACCESSION   DASQSL010001128 DASQSL010000000
VERSION     DASQSL010001128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1134
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186368"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            121..999
                     /locus_tag="VE844_11685"
     CDS             121..999
                     /locus_tag="VE844_11685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZC01986.1"
                     /translation="MRNLYSTDLSDAEWEYLQPHLPAPKANGRPRVYPLREILNAIFY
                     VVRSGCSWRLLPHDFPPWRSVYHYFRQFRLDGTWVRVHAAIRERVRVRLKRNPQPSAG
                     VVDSQSVKTTGVGGEERGYDGGKKVKGRKRHLLVDTEGFVLKAKVMSAKIMDYEGIKE
                     LLDRAKGLFPRLSHLWLDAAYSGEDKGGDWVEKTLGWTVEIVRRPRKPAPEEVLMAWA
                     KQWAKEGVTVDWQKLLPPRGFQVLPRRWVVERTFAWISHNRRMSKDYERLAATSEAFI
                     YVAMTRLMVRRLARAR"
BASE COUNT          254 a          296 c          346 g          238 t
ORIGIN      
        1 cgaaagaggg gccggagtct agcagcctcg gctcttctct cttgccttta ttcagtcaag
       61 tgcgtagaga gactgtctaa aaaggggtag tccggtgtcg gtaccggtac tctaccatgc
      121 atgagaaacc tttactcaac cgacctctcc gatgccgaat gggagtatct gcagccccat
      181 cttcccgctc ctaaagccaa tggacgtcct cgggtctatc ctctacgcga gatccttaac
      241 gccatcttct atgtcgtgag gagcggctgc tcctggcgct tgcttcctca cgatttccca
      301 ccttggcgca gcgtctacca ctacttcaga cagttccgct tggacggaac gtgggtgagg
      361 gtgcacgcag ccatacgcga gcgggtgagg gtgcgcctta agagaaatcc tcaacccagc
      421 gcgggcgtcg tcgatagcca gtcggtcaag acgaccggcg tgggtggaga agaacgcggc
      481 tacgacggtg gcaagaaggt aaagggcaga aagcgccact tactggtaga caccgaaggc
      541 ttcgtgctca aggcaaaggt catgagtgca aagatcatgg actacgaggg gatcaaggag
      601 ttgttggatc gcgccaaggg gctatttccg cgtctttctc acctgtggct ggatgcagct
      661 tacagcggag aggataaggg gggcgactgg gtggaaaaga cgcttgggtg gacggtggag
      721 atcgtcaggc gaccgcgcaa gcctgctccc gaggaggtac ttatggcgtg ggccaagcag
      781 tgggctaaag aaggggtgac ggtggactgg cagaagctac tgccaccgcg gggatttcag
      841 gtcctgccgc gacgctgggt cgtagagaga acgttcgcgt ggatctccca caaccgaagg
      901 atgagtaaag attacgagcg tctagctgct acgagcgagg cgttcatcta cgtagctatg
      961 actcgtctga tggtcaggcg tttagcccgt gctcgatagt ttttagacag tttcagaagg
     1021 tgtattctcg gaaaccatcc caacttattt aaagccgtac cacccgatcg catccttata
     1081 cgttaggacc ggggcaaagc cttattcatc gaacctgaag cgccccgcgc catg
//
LOCUS       DASQSL010001129         1421 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_88995, whole genome shotgun sequence.
ACCESSION   DASQSL010001129 DASQSL010000000
VERSION     DASQSL010001129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1421
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88995"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(174..1181)
                     /locus_tag="VE844_11690"
     CDS             complement(174..1181)
                     /locus_tag="VE844_11690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_040429107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS30 family transposase"
                     /protein_id="HZC01987.1"
                     /translation="MTKNTLLTAEERELISRELAKKSSHRSIAKALGRHHSVISREIQ
                     RNGGDDHYRALGAEERAETMRQRPRLRKLEANQRLHDFVQYGLSHEWSPEQISGKLKE
                     RYPDDLDMRVSAETIYQTLFLQARGELRTQLKLALRTGRTRRISPSRTAETRGKISNM
                     VTISERPAEAEDRAVPGFWEGDLILGKGNKSQIATLVERQTRFVMLVRIPYDRTAERV
                     AHLLARKMETLPDFLKNSVTWDQGKELAAHERFTVKTGLPVYFCDPHSPWQRGSNENT
                     NGLLRQYFPKGTDLSEYTQAELDAVATRLNNRPRRTLGFKTPAEKLDELLLNASVAST
                     T"
BASE COUNT          273 a          424 c          405 g          319 t
ORIGIN      
        1 accatcacgg tttagtaaca ccgctggtca gagtgctgcg acggatcgag gcgggtgacc
       61 agagcggtcc gtctgcgatc cagtcagccc caccgtcact tagatggctt agcagtcggc
      121 tggcagctag tgatccagac gccatgacta agcggtactt ggcgggcttg gtctcaagtg
      181 gtcgacgcga cactggcatt gagcagcaat tcgtcgagtt tttcggctgg ggtcttgaac
      241 ccgagtgtcc ttcgtggacg gttgttcagt cgtgtggcta cggcgtcgag ctcggcttga
      301 gtatactccg acaggtcggt gcctttcggg aaatactggc gcaagagccc gttggtgttc
      361 tcgttgctgc cccgctgcca cggtgaatgc ggatcgcaga agtacacggg aagccccgtt
      421 ttcacggtga atcgctcgtg cgcggccagc tctttgccct ggtcccaggt cacactgttt
      481 ttcaggaagt caggtagtgt ctccattttc cgggccagta gatgggcgac gcgttcggcg
      541 gtgcgatcgt agggaatccg gaccagcatc acgaacctgg tctgccgctc gacgagcgtt
      601 gcgatctgcg atttattgcc cttgccaagg atgagatcac cctcccagaa gccgggcacg
      661 gcccggtcct cggcctcggc cgggcgctca ctgatggtga ccatgttcga gatcttcccc
      721 ctggtctcgg cggtccggga cgggctgatc cgacgcgtac ggccggtacg cagcgccagc
      781 ttgagctgcg tgcgcaactc cccacgcgcc tgcaaaaaca gcgtctggta aatcgtctcg
      841 gcggacacac gcatatccag atcatccggg tatcgttcct tcagtttacc gctgatctgc
      901 tccggtgacc attcgtgcga caggccgtac tgaacaaaat cgtgtaaccg ctgattggct
      961 tccagctttc gcaatctggg acgctgccgc atcgtctcgg cacgttcctc ggcgcccagc
     1021 gcacggtaat ggtcatcgcc gccgtttcgc tgtatctcac gcgagattac agaatgatgc
     1081 cggccgagcg ctttcgcgat agaccgatga gaactcttct tggcgagctc ccgcgagatc
     1141 agctcacgtt cttcggccgt cagtagagta ttctttgtca aggataaccg cctatcagtc
     1201 tgaggtatta tctcacactg tcgcagtcac cacttgagac caagctgcga aaattaggac
     1261 tgcgttagac tcgatcgaag acctgccaat atccccgcga tggaaagatg acctccgcca
     1321 cttctgcgat caatacgtag accactacgt gatcgttgca gaactactcc caggcgaaac
     1381 gcaagcggcc catctaggac ttacctattc ccatcgagtg c
//
LOCUS       DASQSL010001130         1206 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_61691, whole genome shotgun sequence.
ACCESSION   DASQSL010001130 DASQSL010000000
VERSION     DASQSL010001130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1206
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61691"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1156
                     /locus_tag="VE844_11695"
     rRNA            <1..1156
                     /locus_tag="VE844_11695"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          290 a          306 c          379 g          231 t
ORIGIN      
        1 acgaatcttc cccaatgcac gaaagtgtga gggagcgacg ccgcgtgtgg gacgaagtcc
       61 ttcgggatgt aaaccactgt caggggttac caagttctga ggagccccag aggaagtggc
      121 ggctaactct gtgccagcag ccgcggtaag acagaggtgc caagcgttag gcggaatcac
      181 tgggcttaaa gcgtgtgtag gcggacgtct aagtaccttg tgaaatccca cggctcaacc
      241 gtggaactgc tcggtatact ggcgatcttg agccacttag gggctgtcgg aacaaacggt
      301 ggagcggtga aatgcgtaga tatcgtttgg aacgccaatg gtgaaaacag ctcgctgggg
      361 gctcgctgac gctgagacac gaaagccagg ggagcgaacg ggattagata ccccggtagt
      421 cctggcccta aacgatgtcg actagatcgt agtgcctctg acggtattac ggtcgaagca
      481 aaagtgctaa gtcgaccgcc tgggaagtac ggtcgcaagg ctaaaactca aaggaattga
      541 cgggggctca cacaagcggt ggagcatgtg gttcaattcg aagcaacgcg cagaacctta
      601 cctgggtttg acatgctagg attatccccg tgaaagcggg gtaggccctt cggggtacaa
      661 ctagcacagg tgctgcatgg ctgtcgtcag ctcgtgtcgt gagatgtcgg gttaagtccc
      721 ttaacgagcg aaacctttgc ccttagttac cagcgggtta tgccggggac tctaagggga
      781 ctgccggtgt caaaccggag gaaggtggag atgacgtcaa gtcctcatgg cctttatgcc
      841 cagggccaca cacgtgctac aatggggtgc acaaagcgag cctaaagcgc gagctcatgg
      901 gaatcgcaga aatcaccccc cagttcagat cggaggctgc aactcgcctc cgtgaagttg
      961 gaatcgctag taatcgcgga tcagctacgc cgcggtgaat gtgttcctga gccttgtaca
     1021 caccgcccgt caagtcatgg gagccgggaa tggccgaagc cgccacacca cagtggtgtc
     1081 tacgccaggc tcggtgactg ggactaagtc gtaacaaggt agccgtaggg gaacctgcgg
     1141 ctggatcacc tcctttctaa gggactatac ttagaacgac ccgcggggcg acccgcggcg
     1201 aaacgt
//
LOCUS       DASQSL010001131         1264 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_114064, whole genome shotgun sequence.
ACCESSION   DASQSL010001131 DASQSL010000000
VERSION     DASQSL010001131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1264
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114064"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..325
                     /locus_tag="VE844_11700"
     CDS             <1..325
                     /locus_tag="VE844_11700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01988.1"
                     /translation="RVLLPRQPHRQHPDRLPPAVRVAWRPGRVPLNHAAAQFPRGWGM
                     GNAPQSGGGKIKALEDSRRKPRPSRRRSQKVRGPLPWTPLLFVHKIPTPVRSWNAPLS
                     GCGLE"
     gene            310..786
                     /locus_tag="VE844_11705"
     CDS             310..786
                     /locus_tag="VE844_11705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01989.1"
                     /translation="MRPGVKLTLRDLAKKAELSFSATCAQGLEVYARAKIRDQEETLF
                     EPRMQAMMRREIRASDNRHIYFEMRNAIAAEQTRILTTDLYKRQLQKEGVQLKEINQK
                     LDDAYNMARDNILRKARTPQLKNLLAAWWRSTEEKADGSRKENTDTGEAVIGKREA"
     gene            786..>1264
                     /locus_tag="VE844_11710"
     CDS             786..>1264
                     /locus_tag="VE844_11710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01990.1"
                     /translation="MAFVGTRFVKRGKVGNAKAKDTIRYMQHRTGKDKERVMRPLFTS
                     DSPMTRLEAYQFIDEAPKGTKFFTIIIGPDPATEDTHKDLDMRVITINTMQTIEDIIR
                     TQGVMTPVIWVAAIHDDHTDKNHVHALAAIQRRLDKPDLKRLIEATTQACLEQRQEL"
BASE COUNT          314 a          368 c          366 g          216 t
ORIGIN      
        1 gcgggtgttg ttgccccgcc agccgcatcg gcagcatccc gacaggttac ctccggcagt
       61 gcgggtggcc tggcggcctg gccgggtgcc tctcaatcac gcggcggcgc agtttccgcg
      121 ggggtggggg atggggaacg ccccacagag cgggggtggc aagataaagg cgctcgaaga
      181 ctcgcgccga aagcctcgcc ccagccggcg ccggtcacaa aaggtgcgcg gtcctctccc
      241 gtggacaccc ctcctgttcg ttcacaaaat ccccactccc gtgagaagct ggaacgcgcc
      301 tctgtctgga tgcggcctgg agtaaaactg acgcttcggg atctcgcgaa gaaagcggaa
      361 ctcagctttt ccgccacctg cgcgcagggt cttgaagtct atgcccgcgc caaaatccgt
      421 gaccaggagg agaccctttt tgagcccagg atgcaggcga tgatgcggcg ggaaatccgc
      481 gcctctgaca accgccacat ctattttgaa atgcgcaacg ccattgccgc cgagcaaacc
      541 cgcatcctca cgaccgatct ctacaaacgg caattgcaga aggagggtgt gcagctcaag
      601 gagattaatc agaagctgga cgatgcctac aacatggcgc gcgacaatat cctcagaaag
      661 gccaggacgc cgcaactgaa aaacctgctt gctgcgtggt ggcgttcgac tgaagaaaaa
      721 gccgacggta gccgcaagga gaacaccgac acgggagagg cagtgatagg gaaacgtgaa
      781 gcctgatggc gtttgttggt acccgttttg tcaaacgggg taaagtgggc aacgccaagg
      841 ccaaagacac tatccgttac atgcagcacc gcaccggcaa ggacaaggag cgggtgatgc
      901 ggccactgtt taccagtgac agcccgatga cacgcctgga ggcctatcag tttattgatg
      961 aggcacccaa aggcacgaag tttttcacga tcatcattgg tcctgatccg gcaaccgagg
     1021 acacgcacaa agatttagat atgcgggtca ttaccatcaa caccatgcag accatcgagg
     1081 acatcatccg tacacagggc gtcatgacac ccgttatctg ggtagcggca atccacgatg
     1141 atcatacgga caaaaaccat gtgcacgcgt tagcagccat ccaaaggcgt ctggacaagc
     1201 ccgatttgaa acgcctcata gaagcaacca cgcaggcctg tcttgaacaa cgccaagagc
     1261 ttga
//
LOCUS       DASQSL010001132         1216 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_145941, whole genome shotgun sequence.
ACCESSION   DASQSL010001132 DASQSL010000000
VERSION     DASQSL010001132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1216
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145941"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            98..>1216
                     /locus_tag="VE844_11715"
     CDS             98..>1216
                     /locus_tag="VE844_11715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008247612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC01991.1"
                     /translation="MSHFRFLFLALLISIAQDTLARSADELLIVDCMLPGQIRKLGQR
                     ITYLTARQAIKTSAQDCEIRGGEYVAYDRANYATALKVWLPLAEGGDPQAQTYVGEIY
                     EKGLGTSPDYAQAAAWYRKAADQGYTRAQINLGYLYEKGLGVPKDPATALNWYRKSSG
                     ASVEVSLDSGEVQALKQELSERKRAEEALRKELEEARRQMEKAQQELRRLKNKTEAEQ
                     LQLEGARKALEQQKQQAAVTGDQKRIQRLESQLEQREEALKREQAQVERLTAEAQSYQ
                     TKIAALEKQKQQPLPSSPQQVTMAGPTIDIIEPPVSLTRSTIPRIKTRGGIERPIIGK
                     VSAPSGLLSVTVNEREEDLDNKGLFRVKVPVMRGDTTVR"
BASE COUNT          305 a          323 c          358 g          230 t
ORIGIN      
        1 gactactgtc ttaattctta gtctaaaatg ttaaatgttt gccagcaaat cacaaccttt
       61 gacgccaggt aatacacgtt ttggaggtac agattgtatg tcgcactttc gtttcttgtt
      121 tttggcttta ctcataagca tcgctcaaga caccctcgca cgcagcgccg atgagctact
      181 gatcgtggat tgtatgttac ccggtcagat ccgtaagctt ggtcaaagaa taacctatct
      241 gacggcgcgc caagcgatca aaacgagtgc gcaggattgc gagatccgcg gcggggaata
      301 cgttgcctat gaccgtgcca actatgccac agccctcaag gtctggttgc cccttgcgga
      361 gggcggtgat ccccaggccc agacgtatgt gggcgagatc tatgaaaaag gtctggggac
      421 ttccccggac tacgcgcagg ctgcagcttg gtatcgaaag gccgccgatc agggctatac
      481 acgggcccag atcaacctgg gttatctcta cgaaaaaggc ctgggtgttc ccaaggaccc
      541 cgctacggcg ctcaactggt atcgcaagtc ctccggtgcg agcgtggagg tgagcctcga
      601 tagcggggag gtccaggcgc ttaaacagga gcttagcgag cgaaaacgcg ccgaagaggc
      661 cttacgcaag gagttagaag aagcccgtcg gcaaatggag aaggcccagc aggaattgcg
      721 ccggctgaag aacaagacag aagccgaaca acttcaattg gaaggggcta ggaaggccct
      781 ggagcagcag aagcaacagg ccgccgtgac cggggatcaa aaacggatcc agcggctcga
      841 gtctcagctt gagcagcggg aagaggcctt aaagcgcgag caagcgcagg ttgagcgctt
      901 gactgcagag gcacaaagct atcaaaccaa gatcgctgct ctggaaaagc agaagcaaca
      961 gcctctacct tcttcgcccc aacaggtgac catggcgggg ccgactatcg acatcattga
     1021 gccacctgtc agcctgacgc gctcgactat acccagaatc aagacccgcg ggggtatcga
     1081 gcgccccatt atcggcaagg tgagcgctcc ttccggcctg cttagcgtga ctgtgaacga
     1141 acgcgaagaa gatctggata acaaggggct gtttcgggtt aaagtcccgg tgatgcgcgg
     1201 ggataccacg gtgcgc
//
LOCUS       DASQSL010001133         1594 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_114100, whole genome shotgun sequence.
ACCESSION   DASQSL010001133 DASQSL010000000
VERSION     DASQSL010001133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114100"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            312..1256
                     /locus_tag="VE844_11720"
     CDS             312..1256
                     /locus_tag="VE844_11720"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010942950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HZC01992.1"
                     /translation="MKVLIAEDDMISRRLLEATLTRWGYEAIVTHDGVEAWNVLQGAT
                     APSLAILDWMMPGMDGVEVCRKVRQREQEPYIYLLLLTTKGRKEHLIEGLDAGADDYL
                     TKPFDPHELQVRLRAGKRIVTLQAELIEARENLRIQATHDPLTGVWNRRAILEILGND
                     LARSRRDGPPVAAVIADLDHFKRINDTYGHVAGDIALCEAVSRMRTLLRPYDAIGRYG
                     GEEFLIVLPGCTAQDAVRLAERLRLGISQETVTVPGGHVVVTSSLGIAASDTIAAPDA
                     TSLVQAADAALYRARPAAGIASSWPPRQTSPHTPQHPI"
BASE COUNT          335 a          468 c          476 g          315 t
ORIGIN      
        1 agcgcgagtt ggaacgcatc atttcattct tcgatcaggt cgaatgggaa acgcagataa
       61 agaggccctg acctcaggtc gtcatggtcc tctaaggaac cgctcaaggc ttgtgcgtat
      121 ggtttgacgg gcactcgata cggctgccgc ctcgcgaacc ttggcgcaca ccccgcgtgc
      181 agcgcagccc tgcagctcgg gcacgctgcc cagagcggcg ataccgcgct ggtagcagaa
      241 ccatagaagg cttcagccga gttgaaatgc ctgacatcgg cgctgcccgt cccgaccaag
      301 gaggttgtat cgtgaaagtg ttgatcgctg aagacgatat gatttctcgt cgtctcctcg
      361 aggccacgtt gacgagatgg ggctatgagg ccatcgtcac gcatgacggc gttgaggctt
      421 ggaacgtcct acaaggggcg actgctccct cactggctat acttgattgg atgatgcccg
      481 gcatggacgg ggtggaggtc tgccgaaagg tccgacagcg tgagcaggaa ccctacattt
      541 acctgctctt actgacaacg aaagggcgca aggaacatct catcgagggg ttggatgcgg
      601 gggccgatga ttacctgacc aaacccttcg atccgcatga gctacaggtg cgcctgcgcg
      661 ccgggaagcg catcgtgacc ttacaggcag agctcatcga ggcccgggaa aacttacgga
      721 tccaggccac ccatgaccca ttaaccgggg tgtggaaccg tcgggctatc ctcgagatcc
      781 tcggtaatga ccttgcgcgg tccaggcgcg acgggcctcc cgtagccgcg gtgattgccg
      841 acctcgacca tttcaagcgc atcaacgata cgtatggaca cgtggccgga gatatagctc
      901 tctgtgaagc cgtcagcaga atgcgtaccc tcttacgccc ctatgacgcg atcggtcgct
      961 atggcggaga ggaatttttg attgtcctgc cagggtgcac ggcccaggat gccgtcaggt
     1021 tggccgaacg gcttcgcctg ggcatcagcc aggaaacggt caccgttccc ggaggtcatg
     1081 tcgtcgtgac cagcagcttg gggatagcgg caagcgatac catcgcggcg ccggacgcga
     1141 catcgctcgt tcaggcggca gatgcagcct tgtaccgtgc aaggcctgcg gccggaatcg
     1201 cctcgagctg gccaccgcgg cagacatcgc cgcatacacc tcaacacccg atatgattgc
     1261 ccacacatag ctgctggctc tcgaccgcta gagagcatac ccctatccgg catttgcatg
     1321 aagttgtgcg cgagacactc aggctcccta cacaatggtc aagagttcta taatcttggc
     1381 cagggaaggg ttcaacgtct cctgtaccgg cgctgcctgc tctgaccaag gaggtcactc
     1441 cgtgaagatc ttgatcgctg aagacgatat ggtctctcgt gttctgctgg aagccacgtt
     1501 aatcaagtgg ggctacgagg taaccgtggc ctgcgacggc gttgccgcgt gggaattgct
     1561 ccaaagcgac gatccaccgc cactagccat tctc
//
LOCUS       DASQSL010001134         2411 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_145946, whole genome shotgun sequence.
ACCESSION   DASQSL010001134 DASQSL010000000
VERSION     DASQSL010001134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2411
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145946"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1960)
                     /locus_tag="VE844_11725"
     CDS             complement(<1..1960)
                     /locus_tag="VE844_11725"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018231979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HZC01993.1"
                     /translation="MEKTYYPHPIEQRWYSLWEECGYFAPRTAGPPYCIMLPPPNVTG
                     SLHMGHAFQDTLMDCLIRYHRMRGDNVLWQCGTDHAGIATQMVVERQLAEQGSTRASL
                     GRERFVEAVWRWKEHSGGTITHQLRRLGTSMDWSRERFTLDPELSQAVIEVFVRLYEE
                     GLIYRGQRLVNWDPVLHTAISDLEVISAEENGHLWHIRYSLVHAEGYVVVATTRPETM
                     LGDVAVAVHPDDERYQTLIGRHVHLPLTGRTIPLIADPYVDPQFGTGCVKITPAHDFN
                     DYAVGRRHRLPLLNILTADACINDNGPPAYAGLDRFEARKRIVADLEAQGLVERIEPH
                     TLKVPRGDRSHAVIEPYLTDQWYVKVGPLAEEAIRAVEEGAIRFVPSTWSKTYFEWMR
                     TIEDWCISRQLWWGHRIPAWYDNVGTIYVGRSEDEVRSQYNLSKEIQLTQDPDVLDTW
                     FSSALWPFSTLGWPQETRELKTFYPTSVLVTGFDIIFFWVARMIMMGLKFTGQVPFRE
                     VYIHGLIRDADGQKMSKSKGNILDPLDLIDGIDLESLVAKRTTGLMQPEAAPRIAKAT
                     RKDFPHGIPSFGADALRFTFAALATQGRDIRFDLGRIEGYRNFCNKLWNAARYVLMST
                     EGLPATANAPVEWGLPERWIRSRLQQMIT"
BASE COUNT          518 a          669 c          730 g          494 t
ORIGIN      
        1 ccgttatcat ttgttgcagc cgagagcgga tccagcgttc agggaggccc cattcaacgg
       61 gagcattcgc cgtcgccggc aggccctccg tgctcatcag gacatagcgg gcggcattcc
      121 ataatttatt gcagaaattc cggtaaccct cgatccggcc gagatcgaag cgtatgtctc
      181 gcccctgggt agcgagtgcg gcaaaggtga aacgcaaggc atccgccccg aagctcggga
      241 tcccgtgagg gaagtctttg cgggtggctt tggcgatacg cggcgccgcc tcaggctgca
      301 tcaggccggt cgtgcgcttt gcgaccaacg attcaaggtc aatgccgtcg atcagatcga
      361 gggggtccag gatattgccc ttggatttgg acatcttttg accgtcggcg tcccggatca
      421 ggccgtggat gtagacctcc ctgaagggca cctggccggt gaatttgagt cccatcatga
      481 tcatccgggc gacccagaag aagatgatgt caaaaccagt gaccaggaca ctggtgggat
      541 agaatgtctt gagctctctg gtctcctgtg gccagcccag ggtggagaac ggccataagg
      601 ccgaagaaaa ccaggtatcg aggacatcgg ggtcctgggt cagctgtatc tctttagaaa
      661 ggttatactg gcttcggacc tcgtcctcgg atcggcccac atagatcgta cctacattat
      721 cataccacgc ggggatccgg tggccccacc agagttggcg ggagatgcac caatcctcga
      781 tagtgcgcat ccattcgaaa taggtcttgc tccaagtcga agggacaaag cggatagcgc
      841 cttcctcgac agcccggatc gcctcctcgg cgagcggtcc caccttgaca taccattgat
      901 ccgtaagata aggctcgatc accgcatggg atcgatcacc gcgcggcacc ttaagggtgt
      961 gtggctcgat tctctccact aacccctgcg cttccagatc ggccacaatc cgcttgcgcg
     1021 cctcgaagcg atcgaggccc gcataggccg gcgggccatt gtcgttgata caggcatcgg
     1081 cagtgaggat attgagcaaa ggcaggcggt ggcgccgccc gaccgcatag tcgttgaaat
     1141 catgggccgg ggtgatcttg acacagccgg tgccgaattg cggatcgaca taagggtcgg
     1201 cgataagggg aatggtgcgg ccagtcaagg gcagatggac gtgtcggcca atcaaggtct
     1261 ggtagcgctc gtcatcggga tgcactgcca ccgccacatc gccgagcatg gtctcaggac
     1321 gggtagtggc cacgacgaca taaccttcgg cgtgcacaag cgaatagcgg atatgccaga
     1381 gatggccgtt ctcctcagcc gaaatcacct cgagatcgga gatggcggta tgcaacaccg
     1441 gatcccagtt gaccagtcgt tggccgcgat agatgagccc ctcctcataa aggcgtacaa
     1501 acacctcgat cacggcttga gaaagctcag ggtcgagcgt aaaccgctcc cgcgaccagt
     1561 ccatcgaggt gccaagacgc ctgagctggt gcgtgatcgt acccccggag tgttccttcc
     1621 agcgccacac ggcttcgaca aagcgttccc tccccagaga agcgcgcgtt gagccctgtt
     1681 cggccaactg ccgttcaacc accatctggg tggcgatgcc cgcatgatcg gtgccgcact
     1741 gccagaggac gttatcgccc cgcatccggt gatagcggat aaggcaatcc atcaaggtat
     1801 cctgaaaagc gtggcccata tgcaggctgc cggtgacatt gggcggtggc agcatgatgc
     1861 agtacggggg gcctgcagtg cgtggagcaa aatagccaca ttcctcccac aggctgtacc
     1921 aacgctgctc gatcggatga ggatagtaag tcttttccat agtagtcgat gacgaaacgg
     1981 ttgaaatagc tgcaggagga ccctcggggg tggtcgctcg ctgttctttg agcgccccta
     2041 caatatgggt tgtcagttgg gtagtggctc gtttaatctc ctcacggaag gcagctttca
     2101 attcctctgt gagccgccgg ccaaaccgct cgagctcatc tgccggtaag gtgatagtct
     2161 cgggagccgt gggggaagcg gcagggggat taaatggcgc cactttattg cccgggatca
     2221 cgacctcctg caatagggga atgtgttgat tatcaagatc cgtcttattc atgataggag
     2281 gtgatgttgt gggtgttgat ggaataacca cagttttgat aatggcggta acgctcacgc
     2341 gcttgctggc ggcgatccgg ctcgtgaccg accacttcga tgacccgttc aaattggtcg
     2401 ataaaggatg g
//
LOCUS       DASQSL010001135         1770 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_76866, whole genome shotgun sequence.
ACCESSION   DASQSL010001135 DASQSL010000000
VERSION     DASQSL010001135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1770
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76866"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(27..1634)
                     /locus_tag="VE844_11730"
     CDS             complement(27..1634)
                     /locus_tag="VE844_11730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019807102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC01994.1"
                     /translation="MGERIQIPDIPEEARTPLVKGLVDVMEQLVQKVRQQEEKIAQLE
                     DEIAVLKGEKKRPRFKPSQLDKRAGREEGTLGEGKRPGSEKRNKTASLVIHEEQVIAP
                     AEPVPEGSRFKGYREVVVQDLVIRAHNTRYRLERWETPEGRTLMGELPVSVRGGHFGV
                     TLVSYIVCQHHHCQVTQPVLLEQLREWGIDISAGQVDALLTGKHEPFHEEKDALLPTA
                     YVSASYLTVDETGARHRGRNGYTTHIGNEFFAWFGSTKSKSRINFLQLLRAGHEDYRV
                     DAEALAYMQAQKLPHGPLERLRTDSDWLFADEAYWNAHLTRLGVTQERHRRIATEGAL
                     VGSVLHHGFPKELPIVSDDAGQFKVLCHGLCWVHAERLIHTLIPLNPTHRQELAQVRS
                     QLWELYADLKAYKEHPSPEKKTDLEARFDALFTTQTSFETLNQTLRRIQRNKAELLLV
                     LERPDIALHTNGSERDLRDPVKKRKVSGGTRSDLGQRCRDTFMSLKRTCRKLGVSFWH
                     YLTDRLSHTYAIPPLPNLIQQRTAPNH"
BASE COUNT          349 a          556 c          460 g          405 t
ORIGIN      
        1 cagtaacttc tcaaaaggcg gggcgttcag tggttaggag cagtccgctg ctgaatgagg
       61 ttagggagtg gcggaatcgc gtaggtatga gatagtcgat cggtgagata gtgccaaaag
      121 gagaccccga gctttcgaca agtccgcttc aagctcatga aggtatcccg acagcgttgc
      181 cccaggtcac ttcgggtccc gccactgacc ttgcgtttct tgacgggatc gcgaagatcc
      241 cgttcactcc cattggtgtg cagcgcaatg tctggccgct ccagcaccaa cagcaactcc
      301 gctttgttgc gctggatccg tctaagggtt tggttcaggg tctcgaagct cgtttgggtg
      361 gtgaagaggg catcaaagcg ggcttccagg tcggttttct tctctggcga aggatgctct
      421 ttgtaggcct tgagatccgc atacagctcc cagagctgac tgcgcacctg ggcgagttct
      481 tgccggtgcg tcgggttgag gggaatgagc gtgtggataa gccgctcggc atgaacccaa
      541 cacaggccat gacacaggac cttgaactgc cccgcatcgt cgctaactat gggtaactcc
      601 ttcgggaagc catggtgcaa cacactgccc accagggcgc cctcggtggc aatgcgacga
      661 tgccgctcct gggtgacccc taaccgagtc agatgggcgt tccagtacgc ctcatcggca
      721 aagagccagt ccgaatcagt ccgcagtctt tccagtggcc cgtggggcag cttctgcgcc
      781 tgcatataag ccagggcctc tgcatcgacc cggtagtcct catggcctgc tcgcaggagt
      841 tgcagaaagt taatccggct cttcgacttc gtgctcccaa accaggcaaa aaactcattg
      901 ccaatgtggg tggtgtaccc attccggccg cgatggcgcg cccccgtctc atctacggtg
      961 agatagctcg cgctaacata agctgtaggc aacaacgcgt ccttctcctc atggaaaggt
     1021 tcatgcttgc ctgtcagcag cgcatcgacc tgcccggccg aaatgtcaat gccccactcg
     1081 cgcaactgct ctaacaatac cggttgggtg acctggcaat gatggtgttg acacacaatg
     1141 tagctgacca acgtcacccc aaaatgccca cctcgcactg ataccggtaa ctcccccatc
     1201 agggtgcgtc cctccggcgt ctcccatcgc tccagccgat agcgcgtgtt gtgggcccgg
     1261 atcactagat cctgcaccac cacctcacgg tagcccttga agcgcgaccc ctcgggcacc
     1321 ggttcagccg gcgcaatcac ctgctcttcg tgaatcacca gcgacgccgt cttgttcctc
     1381 ttctccgacc ccggccgttt gccctccccc aaagtgcctt cctctcggcc cgctcgctta
     1441 tccaactggc taggcttgaa tcgtggtcgc tttttctctc ccttgagcac cgcaatctca
     1501 tcttccagtt gcgcaatctt ctcttcttgt tgccggacct tttgcaccaa ctgctccata
     1561 acgtccacca accccttcac caaaggcgtt cgcgcttcct caggaatgtc cggtatctga
     1621 attcgttctc ccatggcatt actgtgccac cgaggcatac ccctgtccac ccccctgccc
     1681 cggctttttg agaagttact tttttgaagg tgaacatccg atgaaaaggc ctgaatgcac
     1741 tgcaataatg tagagtattc gctagtgact
//
LOCUS       DASQSL010001136         1549 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_33427, whole genome shotgun sequence.
ACCESSION   DASQSL010001136 DASQSL010000000
VERSION     DASQSL010001136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1549
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33427"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="VE844_11735"
     CDS             <1..192
                     /locus_tag="VE844_11735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007043010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction DNA helicase RuvB C-terminal
                     domain-containing protein"
                     /protein_id="HZC01995.1"
                     /translation="VDSLAAAIGEERGTIEDVIEPFLIQQGFMMRTPRGRMATRATWS
                     HFGLAPPQGNIETDLFDSV"
     gene            227..646
                     /gene="ybgC"
                     /locus_tag="VE844_11740"
     CDS             227..646
                     /gene="ybgC"
                     /locus_tag="VE844_11740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006475518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HZC01996.1"
                     /translation="MSVAVEEFVWPVRVYYEDTDAGGVVYYANYLKFMERARTEWLRA
                     LGFEQDQLRRDEGVVFAVCQIAVDYMKPARFNQSLTVSVRLTKLNSASLYLEHTLVNE
                     VGEAICQGNVKIACLDIDSFRPKPIPKSILAGLRDAN"
     gene            636..1310
                     /gene="tolQ"
                     /locus_tag="VE844_11745"
     CDS             636..1310
                     /gene="tolQ"
                     /locus_tag="VE844_11745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007143903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolQ"
                     /protein_id="HZC01997.1"
                     /translation="MQIDLSIINLIMDASLLVKLVMLVLVLASLWSWTIIFSKRFAMR
                     RARRAADSFEDRFWSAEDLSTLYSRITGRGHEPSGMERIFEVGFREFARLRKREGIDP
                     RAVLEGAQRSMRVALNREIEELEHSLSFLATVGSVSPYIGLFGTVWGIMNSFQALGNV
                     HQATLGMVAPGISEALVATAMGLFAAIPAVIAYNRYSSDLDRLFSRYDIFLEEFSSIL
                     QRQVHA"
     gene            1378..>1549
                     /locus_tag="VE844_11750"
     CDS             1378..>1549
                     /locus_tag="VE844_11750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011234333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HZC01998.1"
                     /translation="MSEINVVPYIDVMLVLLVIFMITAPLITQGVKVDLPEARSEVIS
                     PQEQAPLIVSVDA"
BASE COUNT          307 a          391 c          482 g          369 t
ORIGIN      
        1 gtcgatagtc tcgccgccgc gatcggcgag gagcgcggga cgatcgaaga tgtgattgag
       61 ccgtttctga tccagcaagg cttcatgatg cgcactccgc gcggccggat ggcgacccgc
      121 gctacctggt cccatttcgg actcgccccg ccccagggga acatagaaac cgatctgttt
      181 gacagcgtct aagcgattta tagactatgt gccctccggt gttggtctga gcgtggcggt
      241 cgaggaattt gtctggcccg tgcgggtata ctatgaggat accgatgcag ggggggtcgt
      301 gtactatgcg aattatctca agttcatgga gcgcgcccgc accgagtggt tgcgtgcgct
      361 cggtttcgaa caagaccaac tgaggcggga tgagggcgta gtctttgcgg tctgtcagat
      421 cgccgtggac tatatgaaac ctgcgcggtt caaccagtcg ctcacggtca gtgtaaggct
      481 tacgaagctc aattcggcca gcctgtatct cgagcatacc ctagtgaatg aggtgggaga
      541 ggcaatctgc cagggaaacg tcaagatcgc ttgtttggat atcgactcat tccggcccaa
      601 acccataccc aaatccattc tagcggggct ccgcgatgca aattgatctc tcgattatca
      661 atttgatcat ggacgcgagc ctcctggtca aacttgtgat gttggtgctg gtgctcgctt
      721 cgctttggtc gtggaccatc atcttcagca agcggtttgc tatgagaagg gccaggcggg
      781 cggccgacag cttcgaggat cggttctggt cggcggagga cttatccacg ctttatagcc
      841 gaatcaccgg acggggccat gaaccgagcg gcatggaaag gatcttcgag gtgggttttc
      901 gcgaatttgc gcgcttgaga aagcgggagg ggatcgatcc gagggccgtt ctcgagggtg
      961 cccagcgttc gatgcgggtg gccctaaacc gtgagatcga agagttggag cacagcctgt
     1021 cctttctcgc cacggtaggt tcggtgagtc cttatatcgg tctctttggc acggtctggg
     1081 gaatcatgaa ttcgtttcag gccctgggga atgtgcatca agcgacgctc gggatggttg
     1141 caccgggtat ttcggaggcc ttggtggcca ccgctatggg cctgttcgcc gctatcccgg
     1201 cagttatcgc ctataatcgc tactcgagtg atctcgaccg gttattcagc cgctatgaca
     1261 tatttcttga agaattctcg tccatcctgc agcggcaggt gcatgcttag tgctaacggt
     1321 cagcatattc tcagagggga ggggacgtaa gtgaggcaga gacggcgtaa acggcttatg
     1381 tcagagataa atgtggtgcc ttacatcgat gtcatgctgg tgttgctggt gatcttcatg
     1441 atcacggcgc ctttgatcac tcaaggcgtc aaggtggatc tgccagaggc acgctccgag
     1501 gtgatctctc cacaggagca ggcgcctctg attgtctcgg tcgatgcag
//
LOCUS       DASQSL010001137         1120 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_130160, whole genome shotgun sequence.
ACCESSION   DASQSL010001137 DASQSL010000000
VERSION     DASQSL010001137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130160"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(68..949)
                     /locus_tag="VE844_11755"
     CDS             complement(68..949)
                     /locus_tag="VE844_11755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012078335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein BugD"
                     /protein_id="HZC01999.1"
                     /translation="MIVPFAAGGPTDTVARLLGVPMTTTLKQQIIVENVGGAGGTIAA
                     NRVAKAPPDGYTILIHHIGMATAPALYRKLPYNPMTDFEPIGLINEVPMTLVAKKDFP
                     AKDLLELIAYVKANKDKVNYANASLGAASHLCGMLFMTAIQTEVTTIPYSGTGPAMND
                     LLGGQVDFMCDQTTNTTSQIKAGKIKVYGVTTEKRVPALPDVPTMDEAGLKGFQVAVW
                     HALYAPKGTPKPVLDKLTEALQEALTDATVQQRFADLGTEPVAADRATPEALRKHLKA
                     EIDNWGPIIKKAGVYAD"
BASE COUNT          225 a          315 c          312 g          268 t
ORIGIN      
        1 aagtcgcgcg caaaaaaaag ccggacaacg cccggccttt gctgagatac atccatcaga
       61 agcctgatta atcagcatag actccggcct tcttgatgat tggtccccag ttatcgatct
      121 cagccttaag atgttttcgc agcgcctccg gtgtggcgcg atccgctgcg accggctcgg
      181 tgcccaggtc ggcgaagcgc tgctgcaccg tcgcgtccgt gagtgcctcc tggagagcct
      241 cagtgagctt gtcgagcact ggcttcggcg tacccttcgg cgcgtagagc gcatgccaga
      301 cggcgacctg gaaacctttt aatcccgcct catccatggt tggcacatcg ggcaaagcag
      361 gcacacgttt ttcggttgtc acaccataga ccttgatctt tccggctttg atctggctgg
      421 tcgtgttcgt tgtctgatcg cacatgaagt ctacctggcc gccgagaaga tcgttcatgg
      481 ctgggcccgt gccgctataa ggaatggtgg tgacttctgt ctggatcgcg gtcataaaga
      541 gcataccgca tagatgcgag gcggcaccta ggctggcgtt ggcgtaattc accttatcct
      601 tgttggcttt cacgtaggca atcagttcca ggagatcctt ggcgggaaag tcctttttgg
      661 ctacaagcgt catcggtact tcgttgatga gtccgatggg ctcaaagtca gtcatgggat
      721 tatagggcag cttgcgatac agcgccggcg cggtggccat gccgatgtgg tgtataagaa
      781 tcgtatagcc gtcgggtgga gccttggcca cccggttcgc ggcgattgtc ccgccggcgc
      841 ctcccacatt ttctacaatg atctgttgct tgagggttgt agtcatcggc accccgagca
      901 gtcgcgccac cgtgtccgtt ggtccgccag ccgcaaacgg cacgatcatg gtaatgactt
      961 tattcggata ctcctgcgcc cgtgcctgcg ataggatgag aacaaggaaa caaatgacga
     1021 atcctgccag ttaagtcatc atgatcctcc ttcatgccta tcccctgaat tccgaaacct
     1081 accttgtcaa gttgggcaaa cgctactcga tggcagacca
//
LOCUS       DASQSL010001138         1023 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_9563, whole genome shotgun sequence.
ACCESSION   DASQSL010001138 DASQSL010000000
VERSION     DASQSL010001138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9563"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            607..>1023
                     /locus_tag="VE844_11760"
     CDS             607..>1023
                     /locus_tag="VE844_11760"
                     /inference="COORDINATES: protein motif:HMM:NF026041.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC02000.1"
                     /translation="MCKDCGRAHGGWYDRKTRRVRDLSCGDTRVYLEIEIRRVQCRSC
                     GTVKRERLDVLADNPLYTKRFAWYVGRRCRVSTLQDVAKELRLDWHTVKALDKQYMAA
                     QLARAGTPAPKAIGIDEISIRKGHTYRIVVSDLIRGR"
BASE COUNT          222 a          274 c          303 g          224 t
ORIGIN      
        1 aaggcataca acaacagcgt gggtttcaga tcactcaagc gttcttgcca tcgatacagg
       61 ctgtttttgc tcaccccaaa cacccggcaa accgcattga cccccagccc ttcgttgagc
      121 gcttgcacga tctctacgat gcgtgagagc ggggttttca aattcgctaa gggggtatcg
      181 tgggtctccg aaaaacagtg ctgacattca gggcacgtat agagttgacg aacagcacct
      241 cctttaagcg tatagctttt tcgggtcttt agctgttgac aattacagtt ggaacagtac
      301 agtgaagtcg gggtgagcgg catagatcct cctaaaagat ttgcctactt taaaaagtgg
      361 gtcttcgtga aatcgtgtgg gtagaatcgg tcatgaaatt gcctaagagc caatctggct
      421 gtgggtattt gcggttggat gcggttgcgg aaactggcat gatttcgcga tggctacttc
      481 acgcaaacgc aaacgtcttc tggacgcata tcgagttcct ggcttccgtc ctttggaaga
      541 agtgcgcggc gtctttggtg accccaaggc ccgggtcatc accctcgtcc ggcgctcaaa
      601 aaaacgatct gcaaggactg tggtcgagcg cacgggggct ggtacgaccg caagacccgg
      661 cgggtgcgcg acctgtcctg cggcgacacg cgcgtctacc tggagatcga gatacggcgg
      721 gttcaatgcc gaagctgcgg cacggtgaag cgcgagcgcc tcgacgttct tgccgacaat
      781 cccctttata cgaagcggtt tgcttggtat gtgggccggc gctgccgggt gagcaccctt
      841 caggatgtcg ccaaggaact tcgcctggac tggcataccg tcaaagcgtt ggacaagcag
      901 tacatggcgg cccaattggc gcgggccggc acgccagcgc ccaaggccat cggtatcgac
      961 gaaatctcga ttcgcaaggg ccacacctat cgcatcgtgg tgagcgacct gatccggggc
     1021 cgg
//
LOCUS       DASQSL010001139         4442 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_61853, whole genome shotgun sequence.
ACCESSION   DASQSL010001139 DASQSL010000000
VERSION     DASQSL010001139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4442)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4442)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4442
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61853"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3155)
                     /gene="mfd"
                     /locus_tag="VE844_11765"
     CDS             complement(<1..3155)
                     /gene="mfd"
                     /locus_tag="VE844_11765"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012971431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HZC02001.1"
                     /translation="MRAVTDLLTDKEAVPIPSGERLSPFTPPLPKAGGLRWSGLQSGA
                     KALAIAQAVRRHPAPVLAIVPDSLAASRLKDELRFFLGEDGAYPLLSLPDWEILPYDR
                     FSPYQDIISDRLISLIRTPLLTQGILIVALSTLMHRLAPRDYIEANSLCMQIGERLDH
                     DRFRERLVSCGYRCVSQVMEHGDFALRGSLIDIFPMGSPHPYRIDLFDETIDSMRLFD
                     PESQRSIERVDAIRLLPAREFPLTESAINRFRSNWRTRFAVNPSRCPLYKDVSQGLAP
                     PGIEYYLPLFFEHTATLFDYLPANALVIVAEGVDEEAADAFWAEVCARYEQGRHDLEW
                     PLLKPAEMFLQTHELFGSVGGYPTIAIRQSAATDPKADAVFATVIPPPIPIDARAADP
                     LGAVKHFIQTFEGRVLFAAESKGRRETLLELFHQQGIDPTLYGGWQSFLEGETTVGLT
                     VAPLQQGVQLDLPRLALISEPQLFGEHAFQRRRRQRGGREVEGIIRSLTEIQTGAPVV
                     HESHGVGRYLGLFTLEEVDGILGEFIGLEYAEGARLYVPVAALHLISRYSGIDPEHAP
                     LHKLGSGQWQRARAKVTQQIHDVAAELLNIYARRAARQGYAFTFNSEEYQTFARGFPF
                     EETPDQEAAIGAVLSDMQAALPMDRLVCGDVGFGKTEVAMRAAFVAVMSGKQVAILVP
                     TTLLAQQHFQNFKDRFADWPVRIEHLSRFRGKKEQQAIIEGLEEGSVDIVIGTHKLLA
                     PGLRFKRLGLVIIDEEHRFGVRQKERMKSLRAEVDILTLTATPIPRTLNLALLGTRDL
                     SIIATPPVRRHAIKTFVREWNDRLIEEALIREISRGGQVYFLHNAIETIDKIAEQIQT
                     LVPEARVHVAHGQMRERELERIMLDFYHRRFNVLVCTTIIESGIDVPTANTIVINRAD
                     KFGLAQLYQLRGRVGRSHHRAYAYLLVPSRKAMSADAIKRLEAIETLAELGVGFTLAT
                     HDLEIRGAGEILGEEQSGHIQELGFGLYVELLERTIAALKEDKTPDLERPLDHGTEID
                     LHIPALFPEDYLPDVHTRLIL"
     gene            complement(3161..4348)
                     /gene="lapB"
                     /locus_tag="VE844_11770"
     CDS             complement(3161..4348)
                     /gene="lapB"
                     /locus_tag="VE844_11770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002685826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HZC02002.1"
                     /translation="MSPDYLPPLFWLLVPIAAASGWYAARWRTPVPRGKATHQELSSY
                     FKGLNYLLNEQPDKAIEVFVKSLEVESETVETHLALGNLFRRQGEVDRAICLHQNLIA
                     QISLTREQRCHALLELGMDYMRSGLLDRAESLFQELLGQGITLYTRQALKQLLDIYQL
                     EQDWDKAVACARELESRCGEEVCHLIAQFHCEQAEQSIWQGDSEQALNWVRKALSVDP
                     HCVRASLMEGILAMEAGQIKQAIRAYKRIEHQDSEFLGETMRPLMECYKALGQLDEFS
                     DYVRSVSMNYPGITPALLLAELIANQQGIDQAVSYLSQELQRRPSIRGLDRLLEYAVT
                     HLNGLSKQQVDVLKRFTSNLLKGKFTYKCRHCGFMGKTLHWQCPSCKYWNSVRPIHGI
                     EGV"
BASE COUNT          921 a         1284 c         1303 g          934 t
ORIGIN      
        1 tacaggatca agcgggtatg aacatcgggc aagtagtcct ccggaaacaa ggctgggata
       61 tgcagatcga tctcggtgcc atgatcgagg ggtcgctcca agtcaggcgt tttgtcctcc
      121 ttcaaggccg cgatagtccg ctccagcagt tccacataga ggccaaaacc gagctcctgg
      181 atatggccgc tttgttcctc gccgaggatc tcaccggcgc cgcggatctc gagatcatgc
      241 gtcgccaggg taaatcccac ccctaactct gcgagagttt cgatcgcttc gagccttttg
      301 atggcgtccg cactcatcgc cttgcgcgag ggtacgagca ggtaagcgta agcgcggtga
      361 tgcgagcggc ctacccggcc gcggagttga taaagctggg ccagcccgaa tttgtcggcg
      421 cggttgatga caatggtatt ggccgtgggc acatcgatgc cgctctcgat gatggtggtg
      481 cagaccagga cgttaaagcg gcggtggtaa aaatcgagca tgatccgctc cagttcccgc
      541 tcgcgcattt gcccgtgggc gacatggacc cgcgcctcgg gcactaaggt ttggatctgc
      601 tcggcgattt tatcgatggt ctcaatcgcg ttatggagaa aatacacttg gccgccgcgg
      661 ctgatctcgc gaatgagcgc ctcctcgatg agccgatcgt tccattctct gacgaaggtc
      721 ttgatcgcat gccggcgcac gggtggggtg gcgatgatcg acagatcacg ggttcctaac
      781 agcgccagat tcaaggtgcg cgggatcggg gtcgcggtca gggtcaagat atcgacctcg
      841 gcgcgcagtg atttcatccg ttccttctgg cgcacaccaa agcggtgttc ctcatcgatg
      901 atgacaagac ccaggcgctt gaaacggagc cccggggcga gtagcttatg ggtaccgatc
      961 acgatatcga ccgatccctc ttctagtccc tctataatcg cctgttgctc ctttttcccg
     1021 cggaatcgcg acaggtgttc gatccgcacc ggccaatcgg caaaccgatc cttaaagttc
     1081 tggaaatgct gctgggccag caaggtcgtc ggtaccagga tcgccacctg cttgccgctc
     1141 attacagcta cgaaggccgc acgcatggcg acctcggtct tgccaaagcc cacatcgccg
     1201 cacaccagcc gatccatagg cagggcagct tgcatatcgc tcaatacagc gccgatagcc
     1261 gcctcttgat ccggggtttc ctcaaacgga aagccccggg caaaggtttg gtattcctcg
     1321 ctattgaagg taaacgcata accttgacgg gctgcacgcc gggcatagat attcagcaac
     1381 tcggccgcga catcatggat ctgctgggtg accttggccc gcgcacgctg ccactgcccg
     1441 ctgccgagtt tatgcaaggg cgcgtgctcg ggatcgatgc ctgagtaacg gctgataagg
     1501 tgcaaagcag ccacgggcac atagagccgg gcaccctcgg catattcgag gccgatgaat
     1561 tcgcctaaga tcccgtcgac ctcctccagg gtaaagaggc cgagataccg gcccacgccg
     1621 tggctttcat ggactacggg ggcgcctgtc tggatctcgg tcaggctgcg gatgatgcct
     1681 tccacctccc ggcctccccg ttgccggcgc cgtctttgga aggcatgttc accaaacaac
     1741 tgcggttcgc tgataagcgc gaggcgcggc aggtccagtt ggacgccctg ctgcaaaggc
     1801 gcgaccgtca gcccgacggt ggtctcgcct tcgagaaagc tctgccagcc gccatagagg
     1861 gtaggatcta tcccctgttg atgaaacagc tcgagcaggg tttcgcgccg gcctttggat
     1921 tcagctgcaa ataacacgcg tccctcgaag gtttggataa agtgtttgac ggccccaagc
     1981 ggatccgctg cccgcgcgtc gattgggatc gggggtggga tgactgtggc gaagacggca
     2041 tccgcttttg gatcggtggc ggcgctctgg cggatcgcga tcgtcggata gcccccaaca
     2101 gagccaaata gctcgtgagt ctgtagaaac atctccgcgg gtttgagcag gggccattcc
     2161 agatcatgcc ggccctgttc atagcgggcg cagacctcgg cccagaaggc atccgccgcc
     2221 tcctcgtcga ccccttccgc cacgatcaca agggcgttgg cgggtagata atcgaacagg
     2281 gttgccgtgt gttcgaaaaa caggggtagg taatattcga tgccgggggg cgcaaggccc
     2341 tggcttacgt ccttgtagag cgggcagcgg ctggggttga ccgcaaaccg cgtgcgccaa
     2401 ttggatcgaa accggttgat cgcggactcg gtcaggggaa actccctggc gggcaatagc
     2461 ctgatcgcat ccacccgctc aatcgaccgc tggctttccg gatcgaacag gcgcatactg
     2521 tcgatcgttt catcgaacag atcgatacgg taggggtggg gactgcccat cggaaagata
     2581 tcgatcagcg agccgcggag cgcaaaatcg ccgtgctcca tgacctgaga cacacagcga
     2641 tagccacatg acaccagacg ttcacggaaa cggtcatgat cgagcctttc cccgatctgc
     2701 atgcagaggc tattggcctc gatatagtcc cgaggcgcca gccggtgcat cagggtggat
     2761 agagcgacga tcaggatccc ctgggtgagc aagggggtgc ggatcaggct gatgagccgg
     2821 tcggagatga tgtcctggta aggcgagaag cgatcataag gaagtatttc ccaatctgga
     2881 agactgagta aaggataggc tccatcctcg cccaggaaaa atcggagctc atctttcaga
     2941 cggctggccg ccaggctatc tggcacgatc gccagcacgg gtgccgggtg acggcgcacc
     3001 gcctgggcta ttgccagggc cttggcccca ctctgcaaac cgctccagcg gagccctccg
     3061 gccttgggga gggggggagt aaacggactg agccgctccc cactcggtat agggactgcc
     3121 tctttgtcgg taagaaggtc ggtaaccgcc ctcatggggt ttacaccccc tcgatcccat
     3181 ggataggccg cacgctattc caatacttac agctcggaca ttgccaatgg agcgtcttgc
     3241 ccatgaagcc gcaatggcga catttgtaag tgaatttgcc cttgagcaag ttgctggtaa
     3301 acctttttag gacatccacc tgttgtttgg acaatccatt cagatgggtc acggcgtatt
     3361 cgagcaagcg atccaagccc cgtattgacg ggcgcctttg taattcctga ctcagataac
     3421 tgacggcttg atcaatgcct tgttgattgg cgatcagttc ggccaagagc agtgccggcg
     3481 tgatgcctgg gtaattcatc gataccgacc ggacatagtc gctgaactca tcgagttgac
     3541 ccaaggcttt atagcattcc atgagcggac gcatcgtttc acccagaaat tcggagtctt
     3601 ggtgctcaat ccgcttgtag gcgcgaatgg cctgcttgat ctgtccggcc tccatggcca
     3661 gtatcccctc catgaggctg gcgcgcacac aatgcggatc aacgctgagc gccttcctta
     3721 cccaatttag ggcttgctcg gaatcacctt gccaaatcga ttgttctgct tgttcacaat
     3781 ggaattgggc gatgaggtga cacacctctt cgccgcatct ggattcgagt tcccgagcac
     3841 acgcaaccgc cttatcccaa tcctgttcga gctggtagat atccaacaac tgctttagcg
     3901 cctgccgcgt atatagggtt atcccctgcc cgagcagctc ctgaaataag ctctcggccc
     3961 ggtccaacaa acccgaacgc atatagtcca tgcctaattc cagcagggca tggcagcgct
     4021 gttccctggt caaggagatt tgggcgatca ggttttggtg taggcatatc gcgcgatcga
     4081 cctcgccttg ccgcctgaac aggttaccca gggcaaggtg ggtctctacc gtctcgcttt
     4141 ctacctccag gcttttgaca aagacttcaa tcgctttgtc gggttgctca ttgagcaggt
     4201 aattgagccc cttgaaataa gacgagagct cttgatgcgt tgctttaccc cggggcaccg
     4261 gtgtcctcca acgggctgcg taccacccgg aggcagccgc gattggcact aacagccaaa
     4321 ataacggggg caggtagtcg ggggacatgc taggggaagg agactatact catggagacc
     4381 cctgaggtcg aggcctaagc tgcgctcatc cctgtaacag cagtttttta tcctgcgagc
     4441 gc
//
LOCUS       DASQSL010001140         1056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_130230, whole genome shotgun sequence.
ACCESSION   DASQSL010001140 DASQSL010000000
VERSION     DASQSL010001140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130230"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(135..671)
                     /locus_tag="VE844_11775"
     CDS             complement(135..671)
                     /locus_tag="VE844_11775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02003.1"
                     /translation="MAGNVDDFMRRFGGEGTLDDREAALYHDRFVSTHDDDRDFDNKT
                     YHEGATEYLGKLPDNEFRTAARNAVSQAPPQEREGLLGAILGALGGSTAGGGGAAAGL
                     GGLSGLAKILGLGSTDPRQMDDDDAAKLMDYARKERPEVLRQTVEEKPWFVKAMGNPI
                     VMGVLTMAAAKLLRNRQR"
     gene            complement(709..>1056)
                     /locus_tag="VE844_11780"
     CDS             complement(709..>1056)
                     /locus_tag="VE844_11780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02004.1"
                     /translation="PPGAPNQTARPPSADTGDLRQRQAAFLNRIRDSDPQQRTIERAF
                     LNEQNELGLILNRNVEMDKISDLMKAMLTQMAREFPGQDLTVLAYTPSEPPRKIGTGR
                     LNAQTRDMTYTPE"
BASE COUNT          189 a          321 c          307 g          239 t
ORIGIN      
        1 gcagcacgtg aacccatacg gaacgttcac cctaaatatg caagagcgcc taccgctgga
       61 gcaggtcgct tgctacccgt acgctacttt gccgaaatct cgggcttcgc taggttaagg
      121 ccctaaacgc ggcttcaacg ctggcgatta cggagcaact tcgctgcggc cattgtcagg
      181 acgcccatga cgatcggatt acccatcgct ttaacaaacc acggcttctc ctcgacagtc
      241 tgtcgcaaga cttccgggcg ttctttgcgg gcatagtcca tcaacttggc cgcgtcatcg
      301 tcgtccatct ggcgtggatc agtggagccg agcccgagta ttttggcgag accgctcaag
      361 ccacccaagc cggccgccgc accaccaccc cctgccgtgc tgccacccag agccccgagt
      421 atagcgccga gcagcccttc gcgctcctgc ggaggagctt gtgagaccgc gttgcgggcg
      481 gcggttcgga attcattgtc gggaagcttg ccgaggtatt ctgtggcgcc ttcgtgataa
      541 gtcttgttgt cgaaatcgcg atcgtcatcg tgcgtggaaa cgaagcgatc gtgatacagt
      601 gcggcttcgc gatcatccag cgttccctcg ccgccgaagc ggcgcataaa atcatctaca
      661 tttcctgcca tggttttact ccgttgagtg gtttggttcc tgtgattact attcgggcgt
      721 gtaggtcatg tcgcgcgtct gcgcgttgag ccgcccggtt ccaatcttgc gtgggggctc
      781 cgagggggtg taggccagca cggtcagatc ctggccgggg aactcacgcg ccatctgcgt
      841 gagcatggcc ttcatcaagt ctgaaatttt atccatttcg acgttgcgat tcaggatcag
      901 gccaagctca ttctgctcat tcaagaacgc gcgctcgatc gtgcgctgct gcggatcaga
      961 gtcccgtatc cgattcagga aggccgcttg cctctgccta agatcacccg tgtccgcgga
     1021 tggtggccgc gcggtctgat tcggcgcgcc gggcgg
//
LOCUS       DASQSL010001141         2632 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_130232, whole genome shotgun sequence.
ACCESSION   DASQSL010001141 DASQSL010000000
VERSION     DASQSL010001141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2632
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130232"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..218)
                     /locus_tag="VE844_11785"
     CDS             complement(<1..218)
                     /locus_tag="VE844_11785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02005.1"
                     /translation="MRKWLTSVLLSMGLGLALAGSGYSTHVEERRAREQPVHDVIISR
                     WVREALYEDPKMRSAAINVTTHSGHVVL"
     gene            complement(307..486)
                     /locus_tag="VE844_11790"
     CDS             complement(307..486)
                     /locus_tag="VE844_11790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02006.1"
                     /translation="MWDILSYVLAVWMSPTGALISLAILSVFGYWLYKWIHREPKAPG
                     AEQHVGGAPGGGATR"
     gene            830..>2632
                     /locus_tag="VE844_11795"
     CDS             830..>2632
                     /locus_tag="VE844_11795"
                     /inference="COORDINATES: protein motif:HMM:NF017081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MASE1 domain-containing protein"
                     /protein_id="HZC02007.1"
                     /translation="MLTDSLKYLAGLTVLVFAYLAWAQFSLWLTPVAQPYVPPIWPPT
                     GIGLAVVIIFGYRYWPGIFVGECALTASMGISVQVALGIGVGNTLEAMLGAYLLQRVR
                     GFDRTLTRLSDVWAFVTLAALVAPTIGATIGSVSLGWSQISDLPRMTEIWWTWWLGDA
                     IGALLVAPVLLTWTSTRLNRWTWHQIMEVSALVTLLILLGVLVFGGWVVPPVSYPLEY
                     LFFPFVVWSALRLDQRGSTLTILVATVIAVWDWSHGLGPVAVKANLESLLELQSFLAV
                     LSVTGMALAAAINERRAAEAALQARAAELQELNLVLNSEIGQRKQTEHLARGQRDALA
                     KALLFLTAESDLDKFLGHVLKVMVDELQGIGGALWFPDRDAGSVRLHLEYVDGRTVSA
                     AHSKYPAPCDPMFFERPSMLLGPQASKETRFFSEGDPDVPDDVWRYLRSVGARGLLRL
                     PMLLGEATIGWVTVRSGKRQMPNLDSKIGFIEALASQATLAIQMARLGEQARESAVLA
                     ERNRMARDIHDTLAQGFTGIIMQLQAADDALARDNRDAVQSHIARATELARQSLSEAR
                     RSVRALRPRALEDVPLATAIHSMIRKLTDGTDIRP"
BASE COUNT          526 a          743 c          753 g          610 t
ORIGIN      
        1 ctcagcacca catggccaga gtgggttgtg acgttgatgg ctgcgcttcg cattttcgga
       61 tcttcataca aagcctctct tacccagcgg ctaatgatta cgtcgtgaac gggctgctcc
      121 ctcgccctgc gctcttcaac atgcgtgcta tagccagagc cggcgagcgc caacccgagg
      181 cccattgaca atagaactga agttaaccac tttcgcatct ttctccttct tcctgtaata
      241 aggccgtccc gccgcaggcg ggatggctgc ctaccgggtg agcgcatgac gaatcacctg
      301 tgcccgctat cgcgtggcgc ctccaccggg tgcgccgccg acgtgctgct cggcgccggg
      361 tgctttcggc tcacgatgaa tccacttgta taaccagtag ccgaatacgg agagtatcgc
      421 gagactgatc aaagcgcccg tgggcgacat ccagaccgct agaacataac tgagaatatc
      481 ccacatattt acctcctaaa tgctattcgt tgaatcaacg tttcaaagtc gcgatgtgga
      541 ccctttcctt cggtcaccac ggcttttcaa cgttgtacac tcatgacaat ttcggtccct
      601 cgataactgc atagtatcgg tgtctgtgca gctaatcggt atccggtgaa agcaggagtt
      661 tgaaaccggg ctaaggtggg aaaatcctcc cccacttgcg gtagggcgat gcctacccct
      721 ttcgagagag gtgaggaaag cataccctct caccgctatg ggcggttgta ggtataataa
      781 gaagccttgt cgcctttagc gctggagcgt tttcgaaatt tttacatcaa tgctaacgga
      841 tagcctaaag tatttggcgg gcctcaccgt tctcgttttc gcatatcttg cttgggcaca
      901 gttttcctta tggctgacgc ccgttgcgca accgtacgtc ccgcccattt ggcctcccac
      961 gggaataggc ctggcggtgg tcattatttt cggttaccgc tattggccgg ggatcttcgt
     1021 cggcgaatgt gctctaaccg cttctatggg tatctctgtt caggtggcgc tcggcattgg
     1081 tgtagggaac acgctggagg caatgctggg tgcctatcta ttgcaacggg ttagagggtt
     1141 tgatcgcacg ttaacgcgtc tttcggacgt gtgggcattc gtgaccttag ccgccctggt
     1201 ggcgcccact atcggtgcca caatcggatc ggtcagtcta gggtggagcc agatatcgga
     1261 tctcccccgg atgaccgaga tttggtggac gtggtggctc ggcgatgcga taggggcctt
     1321 gttggtcgca ccggtgctcc tcacctggac gtctactcgc cttaataggt ggacgtggca
     1381 tcagatcatg gaagtgagcg cgctggtcac gctcctgatc ctactcggtg tcttggtctt
     1441 tggaggctgg gtcgtacccc ccgtcagtta tcctcttgaa tatctattct ttccgttcgt
     1501 ggtgtggtcc gcgctccggc ttgaccaacg tggtagcacg ctcacgattt tggtggcgac
     1561 tgtcattgcg gtctgggact ggagccacgg tttaggaccc gtggcggtaa aagctaatct
     1621 tgagagcctt ctcgagttgc agagctttct agctgtgctg tcggtgacag gcatggcact
     1681 cgcggcagca ataaacgagc gccgggcggc agaagcagca ttgcaagcaa gagcggcaga
     1741 gctacaggag ctcaacctcg ttctgaattc cgagatcggg caacggaaac aaacggaaca
     1801 cctcgcgcgc ggccaacggg atgccctcgc caaagcgttg ctatttctca ctgcggaatc
     1861 ggatcttgat aagttcttgg gccatgtgct caaagtgatg gtcgatgagc ttcagggcat
     1921 cgggggtgca ttatggtttc cggatcgcga tgcaggcagt gtgcgcctgc accttgaata
     1981 cgtagatggc cgtacggtca gcgccgctca ttccaagtac ccagcaccct gtgatccgat
     2041 gttcttcgag cgcccctcca tgttgttggg ccctcaagcc tcgaaagaaa cccgcttttt
     2101 cagcgaaggg gatcccgatg tacccgatga cgtgtggagg tatctaaggt ctgttggagc
     2161 aagaggcctg ttacgcctac cgatgctcct aggagaggcc accatcggct gggtcacagt
     2221 gcgcagcggc aagaggcaaa tgccgaactt ggacagcaag ataggtttca tcgaggcgct
     2281 cgcaagccag gccacgctcg cgatccagat ggccaggctc ggcgaacagg cgcgcgaatc
     2341 ggccgtgctc gccgaacgca atcgcatggc acgtgatatt catgataccc tggcgcaagg
     2401 ctttactggc atcatcatgc agttgcaggc tgccgatgat gctctggcca gagataaccg
     2461 cgatgccgtg caatcacaca tcgcgcgcgc caccgaactt gcgcgccaga gtctctccga
     2521 agcgcgccgc tcagtgcggg cgcttcgccc ccgagctctt gaagacgtcc ccttggccac
     2581 agccatccat agcatgatcc ggaagctgac ggatggcacc gatatcagac cc
//
LOCUS       DASQSL010001142         1334 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_103445, whole genome shotgun sequence.
ACCESSION   DASQSL010001142 DASQSL010000000
VERSION     DASQSL010001142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1334
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103445"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1061
                     /gene="ftsZ"
                     /locus_tag="VE844_11800"
     CDS             <1..1061
                     /gene="ftsZ"
                     /locus_tag="VE844_11800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008516016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HZC02008.1"
                     /translation="IKVLGIGGGGSNAVSRMYQHRLPVVEYWALNTDTQHLYYCDVGR
                     RLPLGQKLTGGRGAGGKPEVGRLAAEESHGKIQQAIKGSDMVFLAVSLGGGTGTGAAP
                     VVAQIAKESGALTVAVVSLPFSFEGVTRRKNAEEGIAHLKDHLDALITILNDRLLELN
                     HQKEQAFTWEDALELANSVLHQGIQAMAEVVTVPGEINVDFADVKTILKGAGPAWLAV
                     GKGKGETRAVDAAKMASRSPLLDIAMEGAKRILFVITGGTNLTLQEVQDAARVIEEMA
                     DPEANIIFGTSHDPRLNDEVKMTMVAAAFPVRQDTQQMREAELQRLLQDVIPQSDEEL
                     DVPSFLRQRSTGRRGFFQ"
BASE COUNT          319 a          345 c          392 g          278 t
ORIGIN      
        1 tgattaaagt acttggtatt ggtggcggag gcagcaacgc cgtaagcaga atgtatcagc
       61 ataggctgcc agttgtggag tattgggccc tcaatactga cactcagcat ctttactatt
      121 gcgatgtcgg acgccgacta cccttaggcc agaaattgac cgggggacgg ggagcaggcg
      181 gcaagccgga agtgggccga ctggccgccg aggaaagcca tggcaaaatt cagcaggcca
      241 ttaaaggctc tgacatggtg ttcctggcgg tgagcctggg cggcggcacc ggcaccggtg
      301 cggcgccagt ggtggcccag attgccaagg agtcaggcgc tctgaccgta gcggtggtca
      361 gtctaccttt ctctttcgag ggagtgaccc gccgcaaaaa cgccgaagag ggcattgccc
      421 acctcaagga ccaccttgat gcattaatta ctattctaaa tgaccgactg ctggaactga
      481 accaccagaa ggagcaggcc ttcacctggg aagatgcctt ggagctggcg aactcagtgc
      541 tgcaccaggg tattcaggct atggctgagg tggtcactgt gcccggcgaa attaatgttg
      601 acttcgccga cgtgaaaacc atcttgaaag gtgctggacc ggcctggcta gctgtgggaa
      661 agggcaaggg ggagaccagg gcggttgatg ccgccaaaat ggcgagcaga agccctttac
      721 tggacattgc tatggaaggg gctaagcgga tcctgtttgt gattaccggt gggactaacc
      781 ttacccttca ggaggtgcag gacgctgccc gtgtcatcga ggagatggct gatccggagg
      841 ccaatattat cttcggcacc agccacgacc ccaggttgaa cgacgaggtg aagatgacta
      901 tggtagccgc tgcctttccc gtccgccaag atacccagca aatgagggag gcggaattgc
      961 agaggctgct gcaggatgtg atcccgcaat cagatgaaga actggacgtt cccagcttcc
     1021 tgcgccagcg ttccacgggc cgccgagggt tcttccaata gaggacctac ggacctgccg
     1081 acagccaccc tcacctgctt cctgccactc gtacgcccgt acgactgatc gggatatatg
     1141 cgggatacga gaagccggca gaaatctgta atctacccta ctgttatccc agcagctccc
     1201 cctctacaat cagcggtgca acaaacgcaa cgtttgccta ttgacaagag tttataaatt
     1261 gtttagtgtt aatttatgaa agtatatctt aatgcttccg aagtagcacg gttattaaaa
     1321 gtggatcgtg caac
//
LOCUS       DASQSL010001143         1001 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_61898, whole genome shotgun sequence.
ACCESSION   DASQSL010001143 DASQSL010000000
VERSION     DASQSL010001143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61898"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            38..>1001
                     /locus_tag="VE844_11805"
     CDS             38..>1001
                     /locus_tag="VE844_11805"
                     /inference="COORDINATES: protein motif:HMM:NF013720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl transferase family protein"
                     /protein_id="HZC02009.1"
                     /translation="MIGDAILFYLDENRLKLVGRPTAHNWVQYHAETGGYDVTVERDE
                     RTAFNPTGRRTVYRYQVQGPNALELLEELNGGPLPKIPFFNMGEITIAGRKVRALGHG
                     MAGQAGLELFGPWEERDEVRDAIVETGQDYGLRQVGSRTYATNTLESGWIPSPCPAIY
                     VGEKLEAYRQWLPADGYEGTASLGGSFYSEDITDYYLTPYDLGYGRFVKFDHDFVGRE
                     ALEEVADNPRREKVTLVWNGEDVTRVFGTLFEDGDPAKYIDLPLSNYSTLPYDKVLKD
                     GETVGVSTYTGYSFNERAMLSLACIDVEHSGPGTEVTLVWGEEDG"
BASE COUNT          245 a          251 c          293 g          212 t
ORIGIN      
        1 agccaagcaa tatgtcgcat gcaaccatga cggatatgtg attggcgatg cgattctctt
       61 ctatctggac gaaaatagac tcaagctcgt cgggcggcct accgctcaca actgggtgca
      121 atatcatgca gagactggtg ggtatgatgt aacagtagaa agggacgaga ggaccgcttt
      181 taaccccacc ggacgacgaa cagtttacag ataccaggtt cagggcccca atgctctcga
      241 gctcctggag gagttaaacg gaggaccctt acccaaaatc ccgttcttta atatgggtga
      301 aataaccatc gcgggccgaa aagtccgcgc cttgggtcat ggaatggccg gacaagccgg
      361 attagagctg tttggtcctt gggaagaacg cgacgaagtc cgggacgcca ttgttgaaac
      421 cggtcaagat tacgggcttc ggcaagtggg ctctagaact tacgctacca ataccctgga
      481 atcggggtgg ataccatcgc cctgtccggc gatctacgtc ggtgaaaagc tggaagcata
      541 cagacagtgg ttgcccgcag atggctatga aggcacggct tcgctcgggg gtagctttta
      601 ctccgaggat atcaccgact attatctgac tccctacgac ctcggctatg gccgcttcgt
      661 caaattcgac catgattttg tgggaagaga ggcccttgag gaagtggccg acaacccgag
      721 gcgagagaag gtaacgctcg tctggaacgg cgaggatgtc acccgtgttt ttggaacctt
      781 attcgaggac ggggatccag ccaaatacat cgatctgccc ttatctaact attcgacctt
      841 gccgtatgac aaggtgttga aagacggtga aaccgtcggg gtatcgacgt ataccggcta
      901 cagcttcaac gaacgcgcga tgctctcgct ggcgtgtatc gatgtcgagc acagcgggcc
      961 gggcaccgag gtcacactcg tctggggtga ggaagatggc g
//
LOCUS       DASQSL010001144         1292 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_33489, whole genome shotgun sequence.
ACCESSION   DASQSL010001144 DASQSL010000000
VERSION     DASQSL010001144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1292
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33489"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..673
                     /locus_tag="VE844_11810"
     CDS             <1..673
                     /locus_tag="VE844_11810"
                     /inference="COORDINATES: protein motif:HMM:NF024800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HZC02010.1"
                     /translation="PAFCEACGRRLATTAVRGNGGRSDKLHFYYRCHTRVAEGRDACP
                     QGKTFRAEELEGQVWEEVCGVLKNPEHLRADLEAMIGQERNGLRGDPEREVEAWLDKL
                     SEVDSKRSRFQDMAAEGLISFEELGAKLNELEEIRTTARLELESLGRRQQHLADLEQD
                     KDAVLEYYERVAPDALEGLTPQERNHFYKALRLRVAMKPGGGMEICGPFPNALVVSKA
                     EVSSE"
     gene            940..>1292
                     /locus_tag="VE844_11815"
     CDS             940..>1292
                     /locus_tag="VE844_11815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02011.1"
                     /translation="MRKLLLVTLLSLVGALTVAPAALAQDSLCTTSVAAEGENVTECV
                     DVPSPTPSATASPDVTVISGGPLTPSPTAFAGGTTMSSLAAAVGGKLPGTGGEGFALI
                     AAALLLGSGVLSYAI"
BASE COUNT          266 a          357 c          416 g          253 t
ORIGIN      
        1 ccccgcgttc tgtgaggcgt gtgggcggag gttggctacc acagccgtgc gcggcaacgg
       61 cggccgctcg gacaagctcc acttctacta ccgctgccac actcgagttg ctgagggacg
      121 cgacgcttgc ccacaaggaa agacgttccg ggcagaggag ctggaggggc aagtgtggga
      181 ggaggtctgt ggcgtgctca agaaccccga gcacctgcga gcggatctcg aagcgatgat
      241 agggcaggag cggaacggct tgcgcggaga ccccgagcgg gaggtggagg cgtggctcga
      301 caagctctcg gaagtggata gcaagcggtc ccgctttcaa gacatggctg ccgagggact
      361 catctctttc gaggagttgg gggccaagct caacgaattg gaggaaatcc gcaccacggc
      421 gcggctggaa cttgagagtc tgggacgccg ccaacagcac ctcgcggacc tagagcagga
      481 taaagacgcc gtgctcgaat actatgagcg ggtggcgcct gacgccctgg agggactaac
      541 ccctcaagag cgcaaccact tctacaaggc gctcaggctc agggtagcaa tgaagccggg
      601 cggtggaatg gaaatctgtg ggccgttccc gaatgccctt gtagttagta aagctgaggt
      661 gtcatcagaa tagccacact cgacaatata caagataccc tcatggtaac ggtagagccg
      721 cacgctctcg atcgaaccat tctgtaagga tgtttggtaa gctgagagtt gagtgtcctg
      781 tcatggggcg ggtgcttagg aaaggctagg ccaggatgcg ttggttcgga cgatgagcac
      841 gtaaccttga cccccgattt gttgccttgc taacatgccc tccatttagg aagaggaagt
      901 ttggttgctg ccgcttacga cccagaagaa aggggaaccg tgagaaagtt gctgctggtc
      961 accttgttgt cactggtggg tgcgttaacc gttgcacccg ccgccttagc gcaggattct
     1021 ttgtgcacga ccagcgtagc tgccgagggt gaaaacgtca ccgagtgcgt ggatgttcct
     1081 agccctaccc ctagcgccac cgccagccct gacgtgaccg tcatcagcgg ggggccccta
     1141 accccgtctc ctaccgcttt tgccggcggt actaccatgt cttcccttgc cgccgccgtg
     1201 ggcggtaagc tcccaggcac tggcggtgaa gggtttgcgc tcatagcagc cgcgttgctg
     1261 ctcggctctg gtgtattgag ctacgcaatc tt
//
LOCUS       DASQSL010001145         1008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_33491, whole genome shotgun sequence.
ACCESSION   DASQSL010001145 DASQSL010000000
VERSION     DASQSL010001145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33491"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..757
                     /locus_tag="VE844_11820"
     CDS             <1..757
                     /locus_tag="VE844_11820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008954988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HZC02012.1"
                     /translation="CILGTIVRDALFGPQDPLGASIRLGTLSCEVIGVLRSKGGWITG
                     MDQDDLVVMPLHAFQRRIAGNRDVSTIYVAVASGKATAEVKRNIELVMRERRHLMQNA
                     ENDFEVIDLTEIASKAASTHQVLTALLGAIATVSLVVGGIGIMNIMLVSVTERTREIG
                     IRLAIGAREKEVLMQFLVEAIVLASFGGIAGMLLGLVGSAIAAHFLGIPFIPNLAMVI
                     IAFLFSGAVGVIFGYFPARKAARLNPIDALRHE"
     gene            complement(818..925)
                     /locus_tag="VE844_11825"
                     /pseudo
     CDS             complement(818..925)
                     /locus_tag="VE844_11825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015186867.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
BASE COUNT          211 a          278 c          290 g          229 t
ORIGIN      
        1 ctgcatcctc ggcaccatcg tgcgcgatgc gctgttcggg ccgcaagatc ctctcggtgc
       61 ctccatccgg cttgggacac tatcttgtga agtgatcggg gtgcttagat ctaagggtgg
      121 gtggataacc ggcatggacc aggacgacct ggtggtcatg ccgctgcacg cctttcaacg
      181 gcgtatcgcc ggcaatcgcg acgttagtac tatttacgtc gcggtagcga gcggtaaggc
      241 taccgcagaa gtcaagcgga atatcgagtt ggtgatgcgt gaacgccgcc acctgatgca
      301 gaatgcggag aacgatttcg aagtgatcga tctcacggag atcgctagca aagcggcaag
      361 cacgcaccag gtacttaccg cgctgctggg tgccatcgcc accgtgagcc tggtggtcgg
      421 gggcatcggc atcatgaaca ttatgctggt gtcggtaacc gaacgaaccc gagagatcgg
      481 tattcggctt gccataggcg cccgggaaaa ggaggtcctc atgcagtttt tagtagaagc
      541 gattgtgctt gcgtcatttg gaggaattgc gggaatgctc ctagggctcg tggggtctgc
      601 tatcgccgcc cactttctcg ggatcccctt catcccaaat ctggccatgg tgataatcgc
      661 cttcttattc tccggcgcgg ttggcgtcat atttgggtac tttccggccc gcaaggccgc
      721 gcgtttgaat cccatcgatg cactgcgaca cgaatgagta aagccggggt ttcacaaccg
      781 actttccgcc taccaacctc tgaatttaag aataagtggc tggctcaccg ggggccagtg
      841 ataagtcaaa ccggtctagc ggaagcgaaa gtccttcgcc ccgggccttg gtgtaggcct
      901 ccttgcgggt ccaacaagtt aaaaaacgct cccagctggc gactcgtaat gcaaccgatc
      961 cccgtcaaac tcctttgcta acattagctt tccataggag ctatctct
//
LOCUS       DASQSL010001146         1338 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_48477, whole genome shotgun sequence.
ACCESSION   DASQSL010001146 DASQSL010000000
VERSION     DASQSL010001146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1338
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48477"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..781
                     /locus_tag="VE844_11830"
     CDS             <1..781
                     /locus_tag="VE844_11830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015189442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HZC02013.1"
                     /translation="WHYPVKSMMGQELNAIELTERGLLGDRAYALIDSTDGKVATAKN
                     PRKWPRLFDFSATFVEPARVTGKLPSVRIMLPDGSTVTSDQVDFDQILSKALSRQVTL
                     RAAQRGAVNAEEYWPDIEGLDHRDTVTDFTLPEETFFDCAMVHLLSTATLKRLQQRYP
                     QGRFEIRRFRPNIVVETASSETGFIENGWIGQTLTIGDDVRLSITGPCGRCVMTTLAQ
                     RELPKDSGILRTAVQENMGHVGVYAAVVRGGTIRRGDRLTV"
     gene            827..1249
                     /locus_tag="VE844_11835"
     CDS             827..1249
                     /locus_tag="VE844_11835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008477548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group 1 truncated hemoglobin"
                     /protein_id="HZC02014.1"
                     /translation="MQVPERPSLYDRLGGVYNIATVVDDLIDRVMVDPRLNANPRVDE
                     AHHRVSSAGFKYLVTEMVCWASGGPQKYSGRSMGDSHRHLMINEEEWAAFMSDVQQTL
                     DKFEVPQEEQDELKAIVESTKESIVVKPLQEGPVSNER"
BASE COUNT          314 a          345 c          393 g          286 t
ORIGIN      
        1 ctggcactat cccgttaagt ccatgatggg acaggagctg aacgcaattg agcttacgga
       61 acgtgggctg cttggtgatc gtgcgtatgc tctgatcgac agcaccgacg gcaaagtcgc
      121 cactgctaag aacccgcgaa aatggccgcg tctctttgat ttcagtgcga ccttcgttga
      181 gccggcacgg gtgaccggaa aactgccttc agtccgaata atgcttcccg atggttccac
      241 cgtcacgagt gaccaggttg atttcgacca gatcctctcg aaggcactga gccgccaggt
      301 gacacttcgt gcagcccaac gcggggccgt taacgccgag gagtattggc cggacataga
      361 aggccttgac caccgggaca cggtcaccga ttttactctt ccagaagaaa cattcttcga
      421 ctgcgccatg gttcatttat tgagcacggc cacactcaaa cggttgcaac agcggtatcc
      481 gcaaggccgg ttcgagatcc ggcggtttcg tccgaacatc gtggtcgaga ccgcctcgag
      541 cgagactggc ttcattgaaa atggctggat tggccagacg ctgaccatcg gcgacgacgt
      601 tcgcctgagc atcacagggc cctgcggtcg ctgtgtgatg acgaccttgg cccaacgaga
      661 gctcccgaag gatagtggta ttttgcgtac ggcggtccaa gaaaacatgg gccatgttgg
      721 cgtgtatgcg gctgtcgtgc gaggtggcac aatccgccgc ggtgatcggc tgacggttta
      781 gggctaacct cttatctcaa gcagagcgta agaaggagga tgtgtcatgc aggttcccga
      841 aagaccctca ctatatgatc gccttggcgg tgtctataac attgctacgg tagtcgacga
      901 cctgatcgat agagtcatgg ttgatccaag gttgaatgcg aatcctcggg tagatgaagc
      961 gcaccataga gtctcatcgg ccggcttcaa gtatctcgtg acagaaatgg tttgctgggc
     1021 aagtggcggg ccgcaaaagt attccggacg ctcgatgggt gattcccatc gccacctcat
     1081 gatcaatgag gaagagtggg cggcctttat gtctgacgtc caacaaacgc tcgacaagtt
     1141 cgaagttccg caggaagagc aggatgaatt aaaagccatc gtggaaagca cgaaagaatc
     1201 gattgttgta aagccgcttc aggagggacc ggtaagcaac gagcgataga gcgcaatgcc
     1261 ctaaacaggt gatcggggaa agcttggcga gtacggttcg cgtatcggcc gttgactcgc
     1321 tccatgtcct cgctaaat
//
LOCUS       DASQSL010001147         1389 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_23231, whole genome shotgun sequence.
ACCESSION   DASQSL010001147 DASQSL010000000
VERSION     DASQSL010001147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1389
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23231"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..450)
                     /locus_tag="VE844_11840"
     CDS             complement(<1..450)
                     /locus_tag="VE844_11840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02015.1"
                     /translation="MYTRGMECQLIRYMLGAQLDPVFILPEIHRYPLRLALGVQADLT
                     GQLGRLEARLEALKIEVVGGESELCFTLLDTPLPGKLAGLGQIEPHLGEPPLISFSAE
                     LGKDAFKGQALLIPGTRERIPEIDLARDFTRGIRLRLEAQRDIGSRGV"
     gene            472..>1389
                     /locus_tag="VE844_11845"
     CDS             472..>1389
                     /locus_tag="VE844_11845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02016.1"
                     /translation="MAGGLDLSKERSFTAKGKLERFDPAALGDYPPATINSEFSAEGQ
                     LAPEAHGKLQFSIDESTFNRQPLSGRGQLEVDAKRRIEADVNLTLADNRLTANGDFGA
                     PNGRLRWQIDAPRLERIGPAFGGVLHVSGTLQGSYEKPALDFVLDAARLRLPGDYAIA
                     RIDGEGKLHRSPDGALEVTFNVVGLRAQEPLLDSARLKLAGTLNQHALNLNMRGPKLA
                     LGTELAGGWHKESGWSGLIRRFQNEGIYKITLLSPAELTLGPNRVRLAKAAFALADGT
                     FTIAQLEKEGVRLTTSGEIRGLALAKLLQW"
BASE COUNT          293 a          423 c          425 g          248 t
ORIGIN      
        1 gacgccccga gagccgatat cgcgttgagc ctcaaggcgc aggcggatcc cacgggtgaa
       61 gtcacgggca agatcgatct cgggaatgcg ctcgcgggtg cctgggatca aaagcgcctg
      121 ccccttaaaa gcgtctttac ccagttcagc ggaaaagcta atcagtggcg gttcaccgag
      181 gtgcggctcg atctggccca ggccggccag ttttccgggc aggggggtat cgagcagggt
      241 aaagcacaac tcgctctcac caccgacaac ctcaatcttc aaggcctcca agcgagcctc
      301 cagccgacca agctgaccgg tgagatccgc ctgaacaccc aaggcgaggc gcagcgggta
      361 gcggtggatc tccggcagga taaataccgg atcgagctga gcgccgagca tgtagcggat
      421 aagctgacac tccattccgc gagtgtacat gccggtccgg gaagcttggc gttggcaggt
      481 ggcttggatc tctccaaaga gcggtccttt acggccaagg gcaaactgga acgcttcgat
      541 ccggcggccc tcggggacta tccgccggcc accattaata gtgagttttc ggccgaggga
      601 cagctcgcac cagaggcgca cggcaagctc cagttctcca tcgatgagag cacattcaat
      661 cggcaaccgc tctctggccg gggccaactc gaagtggatg ccaaacggcg cattgaggcc
      721 gatgtgaacc tcaccctcgc cgataaccgg cttacggcca acggcgattt tggcgccccg
      781 aatggacgcc tgcgctggca gatcgatgcc cctcggctgg agcgaatagg ccccgccttc
      841 ggcggcgtct tgcacgtctc cggcacactg caggggagct atgagaaacc ggccctcgat
      901 tttgtcctgg acgccgctcg cttgagactt cccggtgact atgcgatcgc ccgcatagac
      961 ggggagggaa agctacatag atcacctgac ggtgcgctag aagtgacttt caatgtggtt
     1021 gggctgcgcg ctcaagagcc cctgctcgat agcgcacgct taaagctggc cggcaccctg
     1081 aaccagcatg cgctgaacct gaacatgcga ggtcccaagc ttgcgcttgg caccgagctt
     1141 gcgggaggct ggcataagga gagcggctgg agcggactga tccgccgttt ccaaaatgaa
     1201 gggatctata agattaccct gttatccccc gcggagctca ccctcggtcc caaccgtgtg
     1261 cgcttagcaa aagcggcctt tgcacttgcc gatggcacct tcacgatcgc acagctcgag
     1321 aaagaaggcg tgcgtttaac cacaagtggc gagatccgcg gcctcgccct ggctaagctg
     1381 ttgcagtgg
//
LOCUS       DASQSL010001148         1718 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_196703, whole genome shotgun sequence.
ACCESSION   DASQSL010001148 DASQSL010000000
VERSION     DASQSL010001148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196703"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            199..1578
                     /locus_tag="VE844_11850"
     CDS             199..1578
                     /locus_tag="VE844_11850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013334790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC02017.1"
                     /translation="MLGEVFQRFVQQSPLSVMVRGTLERVLGADQLDQFYDRTAHCQY
                     TRELLFSTVYDLMSEVVFCRQPSVRAAYQARAHQIETSLTSVYNKLNGLELHTSAELV
                     RYSATEFAPLIEHVGGDREPWLDGYRLKIIDGNCLEASHRRLKALREVQSATLPGKTL
                     VVYEPTYGLVTNVILCEDAHAQERSLFNTVLQTAREDDLWIADRNFCTRDFLGELDRQ
                     GAFFVIRQHQSFPFEILRCLGAEHRTETGSVAEQRIRFRDTDGEFHQCRRLRLKLNEP
                     TRDGDRRLYILTNLPREAASTVKVATLFRKRWTLETAFQHIEAYFHSEINTLGYPKAA
                     LFGFCLALVAYNVLAVVLASLRGVHGQQKIDQEVSLYYVANEVATTYKGMMIAIPEPE
                     WAIFSTMSPFELGETLLELAQHVRLETFRKSPTRPRKSPAKPKRKPKKGHVSTAKLLQ
                     QQTAKSMTP"
BASE COUNT          381 a          496 c          457 g          384 t
ORIGIN      
        1 gcggtgaatc tcatcaccaa tgcgcaccaa gccttgcgcg agacgacgcc tcctcggcgc
       61 ttgaccctga cgacgcggac ggagccaggc cggaaccgcg tcaggctcga ggtggctgat
      121 acggggccag tgatttcaag gtgaccaact tcgtatagac tataggtctt ctgtcaccct
      181 atgacccagg aggccgtgat gctcggtgag gtgtttcaac gctttgttca acagagtcct
      241 ctatcagtca tggtgcgggg caccctcgag cgtgtcttgg gagcggatca gcttgatcaa
      301 ttctacgatc gaacggccca ttgccaatac actcgcgagc tgttgttttc gaccgtctat
      361 gacctcatga gcgaggtcgt gttctgtcgc cagccctcgg tgcgggccgc ctatcaagcg
      421 cgcgctcatc agatcgaaac ctccctcacc tccgtttata acaagctcaa cggtctagaa
      481 cttcatacct cggctgagct cgtgcgttac agtgccaccg aatttgcgcc cctgattgag
      541 catgtcggtg gcgaccgtga gccttggctg gacggatacc gcctcaaaat cattgatggc
      601 aattgtctcg aagccagtca tcgtcgcctg aaggccttgc gtgaggttca atccgctact
      661 ctgcccggta aaaccctagt cgtctatgaa ccgacctatg gcttggtgac caatgtcatc
      721 ctgtgtgaag atgcccatgc ccaagagcgc tcgttgttta acacggtatt gcagacagcc
      781 cgagaggatg acctctggat tgccgaccgc aatttctgta cgcgggactt cctcggcgaa
      841 ctggatcgac aaggggcgtt ctttgtcatt cgccaacatc agagtttccc gtttgagatt
      901 ctccgctgcc ttggagctga acaccgcacc gagacggggt ctgtggctga gcaacggata
      961 cgctttcgcg atacagatgg agaattccat cagtgccgtc gcctacggct caagctcaac
     1021 gagccgaccc gagatgggga ccgtcgtctc tatatcttga cgaatttacc gcgtgaggcc
     1081 gcgtcaaccg tgaaggtggc gactctcttc cgcaagcgct ggacactgga aactgcgttc
     1141 caacacatcg aggcgtactt tcattctgag atcaatacct tgggctaccc gaaagccgcc
     1201 ttgtttggat tttgcctcgc cttggttgcc tacaacgtgc tcgccgttgt gctggcgtcc
     1261 ttgcggggtg tccacggtca acaaaagatt gatcaagagg tctctctcta ttatgtcgcc
     1321 aacgaggtcg cgaccactta taaaggcatg atgatcgcca ttccagaacc cgagtgggcc
     1381 atcttttcga ccatgagccc gttcgaactg ggtgagacgt tgcttgagct agcgcaacac
     1441 gttcggctcg agaccttccg caaaagtccg actcgaccga ggaaatcccc tgcaaaaccg
     1501 aagcgaaagc ccaagaaggg acatgtctca acggccaaat tacttcaaca gcaaacggct
     1561 aagtcgatga caccttgaaa ttactgatct catggacacc cttcgcacct gggaacgccg
     1621 cgaccagggg cacaaagacg atccctcggc gggttgtgct gatagtcaaa caatcaaggt
     1681 aaccactcag catcaagagg tgggctttga cggcaaca
//
LOCUS       DASQSL010001149         1545 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_186673, whole genome shotgun sequence.
ACCESSION   DASQSL010001149 DASQSL010000000
VERSION     DASQSL010001149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1545
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186673"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..>1545)
                     /locus_tag="VE844_11855"
     CDS             complement(64..>1545)
                     /locus_tag="VE844_11855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02018.1"
                     /translation="CASFFAIPHSCYIACMNPVRKRRRSGGMNVLPAAFWCFVLVMVM
                     GCASDSTTSPGEDITTVVAGQGMDVPAAIAVRPNSDGELWVTNRGSDSITIIRNASAE
                     ASAETRRDGYAEHFVARPSGISFDSTGIYFAVSNDSNNEVRGMEFTANPERNVNFKNN
                     NFMGPALFASDTYALAGQNKAYLEDWPQPGLGHDPPDDVPEHDCPDQYWSDEVKQCLW
                     PREGSHLDMLHGSPLSAGIAHVDKNQYIVLDGCGKSDNKGNCDGHGHVVFYDFNRDHQ
                     EGNGFHGDGVIRRYIDVPFTAVGGISSGVLVRDGWLYYSDSGDGVVRRMKLDSGSTEV
                     LVDSWAGAHQAAHGAQGPGITQWAQVPQDYGDGDDPEVIDKWIQQSGNAALIEATGDS
                     WIKPRETLSEYSYVRGATHEVAVESDRVRQPAGLAASDTSLFVADSASGVISEYSWDG
                     LTHIRDIQTGANELSGLAFSSVGGDALYFTDVSDNSVKRLPLT"
BASE COUNT          323 a          474 c          431 g          317 t
ORIGIN      
        1 gacaggtgat cgtacgtcaa gtcggctccc gaaaccaacg cgctattaat gaccagccct
       61 cggctaggta agaggcagcc gcttaactga gttgtcggag acgtcggtga aatagagcgc
      121 atcgccgcca actgatgaga acgcaagacc agacaattcg ttggcgccgg tctgaatatc
      181 gcgtatgtgc gttaaaccgt cccagctgta ctcggagatc accccactgg cgctgtcagc
      241 cacgaacagg cttgtgtcac tagcagccag acctgcaggc tgcctcacgc gatccgattc
      301 gacggcaacc tcgtgggtcg ctcctcgcac atacgaatac tccgacaatg tctcccgcgg
      361 cttgatccaa ctgtccccgg ttgcctcgat caaagcggcg ttgcctgatt gctgaatcca
      421 tttgtcgatg acttcgggat cgtcaccgtc gccgtagtcc tgcggaactt gagcccactg
      481 agtgatgccg ggcccctgtg ctccgtgcgc agcttgatga gcacctgccc atgaatcaac
      541 cagcacctcg gtcgatccgc tgtccagctt catccgccgt acgacgccgt cgcccgagtc
      601 ggagtaatac aaccatccgt cgcggaccaa gacgccgctg ctgattcctc caaccgcagt
      661 gaacggcacg tcgatatagc ggcgaatcac accgtccccg tggaagccgt tgccttcttg
      721 atggtcgcgg ttgaaatcgt agaagacgac gtgaccatgc ccgtcgcagt tgcctttgtt
      781 gtcgctcttc ccgcagccat cgagcactat gtactggttt ttatccacat gggcgattcc
      841 tgcgctcagc ggactgccgt gaagcatgtc cagatggctg ccttcgcggg gccacaggca
      901 ctgcttcacc tcgtccgacc agtattgatc cgggcaatca tgctcaggaa catcgtcagg
      961 cggatcgtgg cccaagccag gctgaggcca gtcttcaagg taggccttgt tctggccggc
     1021 gagcgcatag gtatcggaag cgaacagcgc tggccccata aagttgttgt tcttgaagtt
     1081 cacgttccgc tcggggttcg ccgtgaactc catcccccgc acttcgttgt tggagtcgtt
     1141 cgagaccgca aagtaaatgc ccgtggaatc gaaggaaata cctgagggac gggcaacgaa
     1201 gtgctcggca taaccgtcgc gccgggtctc agccgacgct tcagcggaag cgttgcggat
     1261 gatggtgatc gaatctgatc cgcggttagt gacccacagt tcgccgtcac tgttcggccg
     1321 gaccgctatc gcagcgggaa catccattcc ctgcccggcc actacggtgg tgatgtcttc
     1381 ccccggtgaa gtagtcgaat ccgaggcgca gcccatgacc atcaccagca caaagcacca
     1441 gaaggctgcc ggcaggacgt tcattccacc gctgcggcgg cgctttcgca caggattcat
     1501 gcaagcaata tagcatgaat gaggtattgc gaaaaacgag gcaca
//
LOCUS       DASQSL010001150         1492 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_158971, whole genome shotgun sequence.
ACCESSION   DASQSL010001150 DASQSL010000000
VERSION     DASQSL010001150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1492)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1492)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1492
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158971"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            318..1403
                     /gene="amrS"
                     /locus_tag="VE844_11860"
     CDS             318..1403
                     /gene="amrS"
                     /locus_tag="VE844_11860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014779368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AmmeMemoRadiSam system radical SAM enzyme"
                     /protein_id="HZC02019.1"
                     /translation="MAIPTMITDFPTQYWHPLDDGRIQCDVCPRACKLHEGQEGLCFV
                     RANHGGRIVLTTYGRSSGYCVDPIEKKPLNHYLPGTPILSFGTAGCNLACKFCQNWDI
                     SKSREIDTLADQAAPETIARAALKLGCKSAAYTYNDPVIFMEYAIDVAQACHAHRLKS
                     VAVTAGYICPKPRTELYHYMDAANVDLKGFTERFYWKICGGHLQPVLDTLLYLKHETQ
                     VWFEITNLLIPGENDSDEEIDAMTRWVVDKLGPDVPMHFTAFHPDWKMLATSPTPPST
                     LTRARRIAIKNGVRYAYTGNVHDKEGGSTYCYQCGEILIGRDWYNLSDWNLTPEGCCR
                     FCGTRCAGVFESQPGTWGAERIPVFLH"
BASE COUNT          344 a          404 c          403 g          341 t
ORIGIN      
        1 gacagaccac cgttggaccc tgcgtgagct gttgctactc caggtccccc ggcccccttg
       61 ggtggcatcc aagcgcccag gacgtccacc caagcagaaa ctgcaaccaa tgatggcaat
      121 ggcagcgtga ccacgattaa gtgcggtgct acccaaagga tcagggcaag ggaataatgt
      181 tattattgcg agaagtctga tgtcaaaaga aagcataagt tattttcaat tctgcaaggt
      241 aacggaccca acttagtgct aagcttataa gcataagcga ggcacgaatg ggacataaga
      301 agttcctgga gctctgtatg gcgataccaa ctatgatcac tgattttcca actcaatatt
      361 ggcatcccct cgatgatggc cgaattcaat gcgatgtttg cccacgggcc tgtaaactac
      421 atgagggcca ggagggccta tgcttcgtgc gagccaatca cggtgggaga attgttttga
      481 ctacctatgg ccgctctagc ggctattgcg ttgaccctat tgaaaaaaag ccgctcaacc
      541 attacctgcc cggtacgccg atcctctcct ttggcacggc aggctgtaat cttgcctgta
      601 agttctgtca gaactgggat atcagcaagt cgcgcgagat cgataccttg gctgatcagg
      661 cggcgcctga gaccatcgct cgggccgcct tgaaactggg ttgcaagagt gccgcctaca
      721 cctataatga tccggtcatc ttcatggaat acgctatcga tgtggcccag gcctgtcatg
      781 cccataggct caagtcggtg gcggtgacgg cgggttatat atgcccaaag ccccggacgg
      841 agttatacca ctatatggat gcggccaacg tcgatttgaa gggctttacc gaacgcttct
      901 actggaagat ctgtggcggc catttgcaac ccgtcctgga taccctcctc tatctcaaac
      961 acgagaccca ggtgtggttt gagatcacca atctcttgat ccccggtgaa aatgactcgg
     1021 atgaggagat cgatgccatg acccgctggg tggtggataa gcttgggccg gatgtgccta
     1081 tgcatttcac cgcttttcat cccgactgga agatgctggc tacgtcgccc acacctccct
     1141 ccacccttac ccgcgcgcgc agaatcgcga tcaaaaacgg cgtgcgctat gcctataccg
     1201 gcaacgtgca tgacaaggag ggtggcagca cctattgcta tcaatgcggt gagatcttga
     1261 tcggccgcga ttggtataac ctcagtgact ggaatctaac ccccgagggg tgttgtaggt
     1321 tctgcgggac ccgttgtgcc ggggtattcg aatcgcagcc gggaacctgg ggcgcggagc
     1381 gaataccggt atttttgcat taacccggcg acggcatgca gccgctgatt gaatatgact
     1441 tactgtctcg caatcgccct cgacgaaggg ctggtcttta cctcggattc cc
//
LOCUS       DASQSL010001151         1510 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_76955, whole genome shotgun sequence.
ACCESSION   DASQSL010001151 DASQSL010000000
VERSION     DASQSL010001151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1510
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76955"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..754
                     /locus_tag="VE844_11865"
     CDS             <1..754
                     /locus_tag="VE844_11865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02020.1"
                     /translation="TLSLTPGRCVRTRVAGLFLFLPLLARVHFDQLVSKADYPGSKRI
                     PATSALLSLLALKLLNKERRSHINDFNFDEAIGLFAGLNIPPKKSYATAYAYGTVRDQ
                     QRKLLSGWVSALAPVLFPQATGFALDFHPIPFRGDPTGVEQHYLPKRGKADKAVLSFF
                     AQEQESRVLCQRQPDAARSSGRDDALRRVLVRDHRQRSPMALFRFQSYSLRGTLEIEP
                     TRHWVYHHSAAWCGDPTPLAIAARQQMAPRCD"
     gene            801..1283
                     /locus_tag="VE844_11870"
     CDS             801..1283
                     /locus_tag="VE844_11870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02021.1"
                     /translation="MKLPAYDGELRQVAVAGLGREQPTLFLSNNVKESARSLIVRYAG
                     RNRVEDTLGSSVNFFHLDCLASEVRLNVDLDAMLTVLANGCYRWLAKQLHGFETAAPK
                     QLFRKFVETSGVVEIEQKRIVVRFDKRSHNPILREAALDQSNQKIPWLQNLPLVFQYP
                     "
BASE COUNT          333 a          417 c          430 g          330 t
ORIGIN      
        1 caccttgagc ctgaccccgg ggcgctgtgt gcgcacgcgc gtggccgggc tgtttctctt
       61 cctgcctctg ctggcgcgcg tgcacttcga tcaactggtg agcaaagccg attatcccgg
      121 ttcaaagagg atcccggcaa ccagtgccct gttgagctta ttggctctca agctccttaa
      181 caaagagcgt cgcagtcaca tcaacgactt caatttcgac gaagcgatcg ggctgtttgc
      241 gggtctcaac attccgccaa agaagtccta tgcgaccgcc tacgcctatg gaacggtgcg
      301 cgaccagcag cggaagttgc tctccggttg ggtcagcgct ttggcgccgg tgttatttcc
      361 gcaagccacg gggttcgcgc tggactttca tccgatccca tttcgtggcg atccaaccgg
      421 agtggagcaa cactatctgc ccaagcgtgg caaagccgac aaagccgtgt tgagtttttt
      481 cgcccaagag caggagagcc gtgtgttatg ccaacgccaa cctgacgcgg cgcgatcaag
      541 cgggcgagac gatgcgcttc gtcgagtttt ggtacgcgat caccggcagc gatccccaat
      601 ggctctattt cgattccaaa gttactcgct acgaggaact ctcgaaattg aaccaacgcg
      661 gcattgggtt tatcaccatt cggcggcgtg gtgcggcgat cctacgccgc ttgcaatcgc
      721 tgcccgccag caaatggcac cacgctgtga ttgacacggc acatcggcgt catcaacgca
      781 tccggtacgt tgatgagacc gtgaaattgc ctgcttacga cggtgagcta cgccaagtcg
      841 ctgtcgccgg cttagggcgc gagcagccga cactgttttt gtcaaacaac gtcaaagaga
      901 gtgcgcgctc gctgattgtc cgttacgccg gacgcaatcg ggttgaagac accctcggca
      961 gcagcgtcaa cttctttcac ctcgattgtc tggccagcga agtgcgtctc aatgttgatc
     1021 tggatgcaat gctgaccgtt ctggccaacg gttgctaccg ctggctggcc aagcaactgc
     1081 atgggtttga aaccgctgcg cctaaacaac tgtttcgcaa attcgtggaa accagtggcg
     1141 tagtcgagat tgagcagaaa aggatcgtcg tgcgctttga taaacgcagt cacaacccga
     1201 tcttgcgaga agccgctctc gaccagtcga atcaaaagat tccctggttg caaaatcttc
     1261 cactggtctt ccagtacccg tgaggggcac gggagcgaaa aatattaatt gatttccctc
     1321 cgtggaaatc ggcgttcaaa gcaggggggc gaagtgcttc cacggatcgc gcggcaagat
     1381 taatcgacgc gaattcgagg tcagagtaaa acgccgattt tcgcaggctg aattaacacc
     1441 taattttagg ggaattgaag acggaccggt ttgcttgtgg aggcagggta ccggagtgaa
     1501 ggaagcgcgg
//
LOCUS       DASQSL010001152         1136 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_130381, whole genome shotgun sequence.
ACCESSION   DASQSL010001152 DASQSL010000000
VERSION     DASQSL010001152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1136
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130381"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..598
                     /locus_tag="VE844_11875"
     CDS             <1..598
                     /locus_tag="VE844_11875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013817821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HZC02022.1"
                     /translation="QIFPPNTCFLADIGNSVAWAIHYLHPSDRRLAGQRPWHAGTFHI
                     ALEFASMGWAIGAAIGTALGFLGNPVVCITGDGSLLMSGQEITVAVQEKLPVIFVILN
                     DAALGMVKHGQRLAGAEPIGFDLPKIDYCAYAKAMGAAGYIIRSPQDLLDLDVGEICK
                     RGGPTLLDVRIDREEVPPMRSRIRALMQSNEYRTRGYP"
     gene            570..>1136
                     /locus_tag="VE844_11880"
     CDS             570..>1136
                     /locus_tag="VE844_11880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002808619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citryl-CoA lyase"
                     /protein_id="HZC02023.1"
                     /translation="MNTEREVIHSRIWEEVPEPDNPFAAAICYCSGYDVYGDLLGKAS
                     WIEYLYFLFKLEPPTKEQARLLEGLAVALANTGPRDHSVQAAMCGGVGGSTAASCLMA
                     ALAVGAGQYGGAHEVALAMSYWQDCGTELAAWQELLRHPPQEERADVWLSLEHPPGFD
                     PHGAGCTTPIRQTLAFLAYCSPGQALAWL"
BASE COUNT          228 a          325 c          330 g          253 t
ORIGIN      
        1 ccagatcttt cccccgaata cgtgttttct ggcagatatc gggaatagcg tggcatgggc
       61 gatccactac ctgcacccct ccgaccgtcg tctggccggc caacgcccgt ggcatgcagg
      121 gacattccat atcgccctgg aatttgcatc gatggggtgg gctatcggcg ccgccatcgg
      181 cacagcgctt ggcttcctgg gtaacccggt cgtttgtatt acaggagatg gcagcctgct
      241 tatgagcggt caggagatca ccgtcgcggt gcaagaaaag ctacccgtca tctttgtcat
      301 tttaaatgat gcagcgcttg gcatggtcaa gcatggacag cgtttggccg gtgccgagcc
      361 aatcggcttt gatctcccca agatagacta ttgcgcgtac gccaaggcaa tgggtgccgc
      421 cggctacatc atccgctcac cgcaggatct tttagatctc gacgtgggtg agatttgtaa
      481 gcgaggcggt cccaccctgc ttgacgtacg catcgatcgc gaggaagtac caccgatgag
      541 gagccggata agggctttaa tgcagtcgaa tgaataccga acgagaggtt atccatagcc
      601 ggatctggga agaggtcccg gaacctgaca atcccttcgc cgctgcgatc tgttactgtt
      661 ccggctatga cgtctacggt gatctgctcg gcaaggcaag ctggattgaa tacctctatt
      721 ttttatttaa actagagccg ccaaccaaag agcaggcaag gctgctagaa gggttggcag
      781 ttgccctcgc caatacaggg ccacgcgatc acagcgtaca ggccgctatg tgtggcgggg
      841 taggcggctc cacggctgct tcttgcctga tggctgcgct tgcggttggc gctggtcagt
      901 atgggggcgc tcatgaggta gcgctggcga tgagctactg gcaagactgc ggcactgagc
      961 tagccgcctg gcaggagctt cttaggcacc caccccaaga agaacgcgcc gatgtctggt
     1021 tatcccttga acaccccccc ggttttgatc cgcacggtgc tggttgcacc actcccatcc
     1081 gccaaaccct agcctttctt gcttactgca gcccaggtca ggccttggcc tggcta
//
LOCUS       DASQSL010001153         1025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_89122, whole genome shotgun sequence.
ACCESSION   DASQSL010001153 DASQSL010000000
VERSION     DASQSL010001153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89122"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            399..644
                     /locus_tag="VE844_11885"
     CDS             399..644
                     /locus_tag="VE844_11885"
                     /inference="COORDINATES: protein motif:HMM:NF024908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC02024.1"
                     /translation="MVTISTTTIPREDVWRAFRQTHDARLRERYHCILLLFDGKSCPE
                     IAQWLYREEDTIRSWVHAFNQGGLQGLEREFIPGRPA"
     gene            720..>1025
                     /locus_tag="VE844_11890"
     CDS             720..>1025
                     /locus_tag="VE844_11890"
                     /inference="COORDINATES: protein motif:HMM:NF024980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HZC02025.1"
                     /translation="MWTTKLVRHFIATRLGVEYGRERVRQLLHGLGFRLRRLRHRHLK
                     GNPEEQAAFRAELEELLAAWPEQWELIFVDEATVRRHPTLMAQWCLVDEVPEVPTGDD
                     "
BASE COUNT          219 a          268 c          337 g          201 t
ORIGIN      
        1 aactctggaa aatcgtggag atttccacga ttgaacaact gtcagcttcc agagaaattg
       61 gcattatgac ggtttccagg cgtgtgtggt gcgggcagcg attaagccac tacctatgac
      121 aggctatggt gtgtcgaatc caatcattcg attggaaacc accctaggga aaggctggac
      181 cttaatcagg gagtgcttgc agattcaacg acacgcctca agcttctgat aaaacattga
      241 gccgaaaatg gttggttcaa gctgccgagg ctgctacaga ccacaaatgg acagcattcc
      301 ccacagggtc attgcgcctc cagtgatgca acaaaataat cccggttttt caggcccccc
      361 ggtatagggg agcagacaag aggaggaggg cctgaaccat ggtgacgatt agcactacca
      421 cgatcccacg cgaggacgtt tggcgtgctt ttcggcagac gcatgatgcc cggctgcgtg
      481 agcggtacca ctgtattctg ctgctgttcg atggcaagag ctgtcccgag attgcgcagt
      541 ggctgtatcg ggaggaggac accattcgga gctgggtgca cgccttcaac cagggcggcc
      601 tgcagggcct ggagcgcgaa ttcatcccgg ggcggccggc gtgactgacg gcggagcaac
      661 ggacgcaggt caaagaggcg gtccgccgct gtccgcgaga gctgggctat cacaggagtg
      721 tgtggaccac caagttggtc cggcacttca tcgcgacccg cttgggcgtc gagtacggcc
      781 gcgagcgggt ccggcaattg ctgcatgggc tgggatttcg cttgcgccgg ctgcgccacc
      841 gccacctgaa gggcaatcct gaggagcaag cggcctttcg cgcggagctg gaggagctat
      901 tggcggcgtg gcccgagcag tgggaattga tctttgtgga tgaggcgacc gtacggcggc
      961 atccgacatt gatggcccag tggtgcttgg tcgatgaggt gccggaggtc ccgacgggag
     1021 atgac
//
LOCUS       DASQSL010001154         1458 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_33516, whole genome shotgun sequence.
ACCESSION   DASQSL010001154 DASQSL010000000
VERSION     DASQSL010001154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1458
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33516"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            161..499
                     /locus_tag="VE844_11895"
     CDS             161..499
                     /locus_tag="VE844_11895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02026.1"
                     /translation="MERLGRAVGQRVVAAQPAAWRWRGREVKLVDGTTVSMPDTKANQ
                     GRFPQNREQCAGLGFPLARRVAIVSLSCGVVLEWAVGPCEGKETGERALLWELAKQLQ
                     LGDIVVADRY"
     gene            512..1075
                     /locus_tag="VE844_11900"
     CDS             512..1075
                     /locus_tag="VE844_11900"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02027.1"
                     /translation="MIAWLIRLGVEVVIRQHQCRARDFRRGQRLGARDHGVSWTRPKR
                     PDWMDEMTYATMPQTLTLREARVGGWTLVTTLIDPREVHKQELFALYRQRWHVEPDLR
                     SIKGVMQMDILRCKTPERVCKEIAVHLLAYNLVRAVMAQAAYRGNILPRKLSFKGALD
                     LLNAFAETLRHTGSTRATGELPGASAR"
BASE COUNT          301 a          357 c          502 g          298 t
ORIGIN      
        1 cactggtggt gtttgttgag caggtgatga gtgtgtggat cacggttgtc aggaagcggt
       61 cgcagggggt gtctgtgcgc gagtggtgga ggggcgagca ccgggcagtg cgaacaccgg
      121 tccgtactgt aaggcgcgag cgcgcctgcc gatagggcta gtggaacggt taggacgtgc
      181 ggttggccag cgagtggtgg cggcgcagcc agcggcctgg cggtggcggg gacgggaagt
      241 taagttggtc gatggcacga cagtatcgat gccggatacg aaggcgaacc aagggcgctt
      301 cccgcagaat cgagaacagt gcgcggggct cggatttcct ctggcacggc gggtggcgat
      361 cgtgtcgcta tcctgtgggg tggtgctgga gtgggcggta ggcccctgtg aaggcaaaga
      421 gacgggggag agggcgctct tgtgggagct agcgaagcag ttgcagttgg gggatatcgt
      481 cgtagctgac cgttattagg cgagttactt catgatcgcc tggttgataa ggttgggggt
      541 ggaggtggtg attcgccagc atcaatgtcg agctagggat ttccgtcgcg gccagcgctt
      601 aggtgcacgc gatcatgggg tgagctggac ccgaccgaaa cgccccgact ggatggatga
      661 gatgacctat gccacgatgc ctcagacgtt gacgctgcgt gaagcgcgcg tcggtggttg
      721 gaccttggtg accacgctga tcgacccgcg cgaggtgcat aaacaagaac tgtttgccct
      781 ctatcgtcaa cgctggcacg tcgaaccgga tctgcgttcg atcaagggtg tcatgcagat
      841 ggatattctc cggtgcaaga ccccggagag ggtgtgcaag gaaattgctg tgcatctgct
      901 cgcctacaac ctggtgcgtg cggtgatggc gcaggccgct tatcggggga acatcctacc
      961 gagaaaattg agtttcaagg gtgcgttgga cctgctcaac gccttcgccg agaccttgcg
     1021 tcacacaggg tccacgcggg caactggcga gttgccaggc gcatctgctc gctagcatgg
     1081 cccgattgaa gctacctgac cgacccggac gcatcgagcc cagagcaatc aagcgcaggc
     1141 caaagccaca ccggttactc acgaaaccac gccatacctg gcgtgcgcga ctcgttaggc
     1201 aacaggaaaa acgacgtgtt gagttcttaa ggtagtgcca ttggggtctg accctgtggt
     1261 atccctacaa ataaagctgt aacatcagcc tgttgaatat atttttcagg gccagggaac
     1321 ttagctgatg ttcgatgttc tcccggattg gtaatcacac caacaacggg aggtctcatc
     1381 ctgcaggcag gacaagtatt gcatactgca ggcaggacaa gtattgcata gactcctccg
     1441 gggagtctgt ggcgggat
//
LOCUS       DASQSL010001155         1264 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_76972, whole genome shotgun sequence.
ACCESSION   DASQSL010001155 DASQSL010000000
VERSION     DASQSL010001155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1264
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76972"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            253..702
                     /locus_tag="VE844_11905"
     CDS             253..702
                     /locus_tag="VE844_11905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02028.1"
                     /translation="MSKSPLRIARTARRIAERALPRYSSKYSPQRFTQVQLFACLVLR
                     QFFRTDYRGLVALLEDFPELRRALKLKRLPHYSTLCYAQHRLMRSARIRALQRELLRA
                     VPASQRATAIADATGLETRPVSRYYVERQGKRSGRRRFPQAQPGSRS"
     gene            635..1123
                     /locus_tag="VE844_11910"
     CDS             635..1123
                     /locus_tag="VE844_11910"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02029.1"
                     /translation="MSARVSARAAVASPKLSLVAEAESHLIAGVHISLGPSQDSPQLR
                     PALKEAASHRRFDRLLADAAYDAEHNHVLARQPLGIRSTVIPINRRNHGRKWPKTHYR
                     RQMRKRFFKRVYRQRAQVENIISRHKRLLGATLRARTWRTQKQECLVRILTHNVMILR
                     AA"
BASE COUNT          264 a          403 c          324 g          273 t
ORIGIN      
        1 gcttggacac ctgattgacc aggccacccg gctccatgcg gccgtagagc accgaggccg
       61 gacccttcaa aacggctctt tgggaattgc cgtggaatcg gctgcaaaaa cctcttgctt
      121 gtcccgctaa gtcgttgaaa agattgggag gggtgttgaa cccggtttcg ttttcacggc
      181 aattggctcc gttgaaaacc tgtgtgttat ctccatcttc taggcatgcg aaacgatcaa
      241 acgacccgtc cgatgagtaa atccccgctg cggatcgcgc gcacggcacg gcggatagcc
      301 gagcgagcgc tgcctcggta ttcctcgaag tactccccgc agcgcttcac gcaagtccag
      361 ctgtttgcct gcctggtgtt gcgacagttc tttcgcaccg actatcgagg gttggtggcc
      421 ttgctcgagg atttccccga gttgcgtcgg gcactcaaat tgaaacgcct gccccactac
      481 tcgaccttgt gctacgccca gcaccgcctg atgcgtagtg cgcgcattcg cgccttgcag
      541 cgtgagctct tgcgggcggt gccagcgtct cagcgtgcga ccgccatcgc cgatgccaca
      601 ggactcgaga cacgccctgt cagccggtat tacgttgagc gccagggtaa gcgctcgggc
      661 cgccgtcgct tcccccaagc tcagcctggt agcagaagct gagagccatc tcattgcggg
      721 cgtccatata agccttgggc cttcccagga ctcccctcaa ctgcgccccg ccctgaaaga
      781 ggccgcctcc catcggcgct tcgaccggct cctcgccgat gccgcttacg atgccgagca
      841 taaccatgtg ctggcccgac agccacttgg catccgctca accgtgatcc cgatcaatcg
      901 ccgcaatcac gggcgcaaat ggccaaaaac gcactaccgc cgccagatgc gtaaacgctt
      961 cttcaagcgc gtctaccgtc aacgcgccca agtcgagaac atcatctccc gtcacaagcg
     1021 gctcttgggc gctactttgc gcgcacgtac ctggcgtacg caaaagcagg aatgcctcgt
     1081 tcggatcctc acccataacg tgatgatcct tcgggccgca taatgttttc aacggagcca
     1141 acttagttct aaagcttgcc aatttggatg gaagtaacca ccttggattc attaattttt
     1201 cttaaaagaa caagtcgtct ttcgaacctt aacaatttta attcaaaaaa gaggttcacc
     1261 tcaa
//
LOCUS       DASQSL010001156         1964 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_89128, whole genome shotgun sequence.
ACCESSION   DASQSL010001156 DASQSL010000000
VERSION     DASQSL010001156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1964)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1964)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1964
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89128"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..245)
                     /locus_tag="VE844_11915"
     CDS             complement(<1..245)
                     /locus_tag="VE844_11915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015154450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZC02030.1"
                     /translation="MGIPLRVLLVEDLEDDALLLERVLRRAGYDVTSERVDTAAAMHA
                     ALDRQAWDIVIADYTLPDFNGLAALALVNERELDLPF"
     gene            complement(256..693)
                     /locus_tag="VE844_11920"
     CDS             complement(256..693)
                     /locus_tag="VE844_11920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006514928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZC02031.1"
                     /translation="MWHKIIMLVEDNPDDEALTLRALRKNNIQNEVVVAHDGVEALDY
                     LFGTGVYVTRDMRIRPVVVLLDLKLPKIDGLEVLRRLRADERTKFTPVVVLTSSKEEQ
                     DLINSYSFGCNSYIRKPVDFVQFVEAVRQLGLYWLVLNEAPPV"
     gene            complement(778..1758)
                     /locus_tag="VE844_11925"
     CDS             complement(778..1758)
                     /locus_tag="VE844_11925"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZC02032.1"
                     /translation="MCPSLADGLGGAVKGEKRFLTTGEIARYCAVSHLTVTNWIRAGK
                     LFASRTPGGHNRIRREDLLRFLIEHDFPVPRELAKEGKQILIVDDERALVEIMAQTLR
                     EDGYQVSIAFDGYEVGLQMATLRPDLLLLDLIMPGLDGFSICQRVKANPEGKPTKIIA
                     MTGFVQEGNLAKAIECGADLCLAKPFQLQTLKEMVAKLLGGPRALPSAALGLERRRSL
                     RVQAEFPVLCIPVKGASSKVSTPWQGKTLNVSREGILLAMAAPIEPYTLLSVQIRLQD
                     SDIPIAIVGESRWLREDQHGQSYRIGLAFVPMQRQVGKRWIQAIYTSSLS"
BASE COUNT          418 a          588 c          516 g          442 t
ORIGIN      
        1 ataaacggca ggtcgagctc acgctcgttc accagcgcta aggccgccag cccgttgaag
       61 tccggtaatg tatagtccgc gatgacgatg tcccaggcct ggcgatcgag cgcggcatgc
      121 atagcagcag cggtatcgac ccgttcggat gtaacatcgt accccgcccg ccgtaacacg
      181 cgctccagta agagcgcatc atcttccagg tcttcgacga gcagtacgcg caacggaata
      241 cccataccag cctctctaca ccggtggcgc ctcgttcagg acgagccagt aaagtccgag
      301 ctggcgtacc gcttcgacga attggacgaa gtccaccggc tttcgaatat aactattgca
      361 gccaaaactg tagctattaa tgagatcctg ctcttcctta gaagaggtga gcacgaccac
      421 tggggtaaac ttggtccgtt catcggcgcg gagacggcgg agcacctcca agccgtcgat
      481 cttgggcagc ttgaggtcca agagcacgac cacgggcctg atccgcatat cgcgcgtgac
      541 gtagacgccg gtgccgaaca agtaatccag cgcctccacg ccgtcgtgtg ccaccaccac
      601 ttcgttctga atgttgttct tcctcaacgc tcgcagcgtg agggcctcgt cgtcgggatt
      661 atcttccacc agcatgatga tcttgtgcca catggcttgg cccttccgac ttgctatgcc
      721 ctggtggggg ataatagcct atgcttcgcc tcagccacat accgcgtgca tcacatatca
      781 ggagagcgat gaggtataaa tcgcttggat ccagcgcttg ccgacctgcc tttgcatcgg
      841 cacaaacgcc aatccaatgc gatagctctg cccgtgctga tcttctcgca accagcggct
      901 ttcccccacg atcgctatcg ggatgtcgct gtcctgcagg cgaatctgta cgctcagaag
      961 cgtatagggc tcgatcggcg ctgccatcgc caagagtatg ccttcgcggc tgacgttcaa
     1021 tgtcttgccc tgccatggtg tgctgacctt gctggaagcg cctttgacag ggatgcaaag
     1081 caccggaaat tccgcctgca cgcgcagcga tcgtcgacgt tcaaggccca gagcagcgct
     1141 aggcagagcg cgaggacccc ctaacagttt ggcgaccatc tctttcagcg tctggagctg
     1201 aaagggtttt gccagacaga ggtcggcgcc gcactcgatc gccttggcga gattgccttc
     1261 ttgtacgaag cctgtcatgg caatgatttt ggtgggcttc ccctcggggt tggccttcac
     1321 gcgctgacag atggagaacc catctagacc aggcataatg aggtctaaaa gcagcaggtc
     1381 cggccgcagt gtcgccatct gcaggcctac ttcatagcca tcaaaggcga tgctcacttg
     1441 atagccgtcc tctcgcaacg tttgcgccat gatttccacc agcgcccgtt cgtcgtctac
     1501 aattaagatt tgcttcccct ccttggctaa ctctctgggg accggaaagt catgttcaat
     1561 gagaaaccgt agcagatcct cccgccgtat ccgattatgt ccgccaggtg tgcgtgaggc
     1621 aaagagcttg ccggcccgta tccaattcgt gaccgttaag tgactcacgg cacagtacct
     1681 ggcaatctct cctgtggtca gaaatctttt ctctcccttc acagctcccc ctaggccgtc
     1741 cgccaatgac gggcacactg actccttgaa accgtcaaat attgtcaaat atcattaata
     1801 ttctattatt ttaggaaagt ctagataatt tctcttttgg tgcaccgttt ccggcaagga
     1861 tagcaagccc tgagctctac ggctaggtcc cttctagcgg cggctccgtc gctccgagaa
     1921 agcgtttacg tgagggatcc gtcacagggt gaaagagaag gtcg
//
LOCUS       DASQSL010001157         1434 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_23277, whole genome shotgun sequence.
ACCESSION   DASQSL010001157 DASQSL010000000
VERSION     DASQSL010001157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1434)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1434)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1434
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23277"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..524)
                     /locus_tag="VE844_11930"
     CDS             complement(<1..524)
                     /locus_tag="VE844_11930"
                     /inference="COORDINATES: protein motif:HMM:NF044287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02033.1"
                     /translation="MIDRYPGARPFADTPDDQRLFFGRSQEIDTLFHRIGATRLLVLF
                     GKSRLGKTSLLQAGVFPRLRERAMLPLPMRLNQKGSPLETITAFAQTVCQSAGIDYIP
                     GEGESLWEFFKTAMFWRDDTLLTPVLVFDQFEEIFTLKQAVERTALAHELGDLFRGGV
                     PQTMREKRQTGSVSP"
     gene            complement(550..1206)
                     /locus_tag="VE844_11935"
     CDS             complement(550..1206)
                     /locus_tag="VE844_11935"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003953 - NAD+ nucleosidase activity
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="toll/interleukin-1 receptor domain-containing
                     protein"
                     /protein_id="HZC02034.1"
                     /translation="MLNAHGRRNRSFALEDQTFFAHPDYQQTVVFYANEHLIEFDQLS
                     WLEFAKKLRNTYEGSVAKKPGVAPKPPPNAPKVFLCYASEDRDQVEQLNQRLRTAGID
                     TWQDKQNLRAGDNWDRQLVHVIEKLVDYVVIVQTLAMTSQVEGYFYKEIDAVLERQKR
                     FATGFRFVLPITLSTCEGMARLRDLHNISLYEPSGFASLIDAIQTDWQRRQGQAVKMA
                     "
     gene            complement(1246..>1434)
                     /locus_tag="VE844_11940"
     CDS             complement(1246..>1434)
                     /locus_tag="VE844_11940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02035.1"
                     /translation="VKPTVKEPLVYDLYGSRTEPESLVLIENDRLEFLVNVIKGSTEL
                     PPFIRSQFANSDTSFLFV"
BASE COUNT          322 a          386 c          391 g          335 t
ORIGIN      
        1 gggctcacgc tgcctgtttg acgcttctct cgcattgttt gcggcacacc accgcgaaat
       61 agatcaccca gctcgtgcgc cagcgcagtg cgttccaccg cttgcttgag cgtgaagatc
      121 tcctcgaact gatcgaagac caacaccggc gtcagtaggg tatcgtcacg ccagaacatc
      181 gcggtcttga agaactccca caggctttct ccttcgccgg ggatataatc gatacctgca
      241 ctctggcaga ccgtttgggc gaatgctgtt atagtctcta ggggcgaacc tttctggttc
      301 aaacgcatgg gcaaaggcaa catcgcccgt tcccgaagtc gtgggaacac gccggcctgg
      361 agcagcgagg tcttgcccaa cctcgacttg ccaaacaata ccagcaggcg ggtcgcgccg
      421 atccggtgaa acagggtgtc gatctcctgc gagcggccga agaacaggcg ctgatcgtcg
      481 ggggtgtcgg cgaaagggcg tgcgccggga tagcgatcga tcatgagcgg ccagtcaacg
      541 gtgcagtcat caggccattt tcactgcctg gccctggcgt ctttgccaat cggtctggat
      601 agcgtctatc aggcttgcaa atccacttgg ttcatagagg ctgatgttgt ggagatcgcg
      661 cagccgggcc atgccttcac atgtcgatag cgttatcggt agaacaaaac gaaatcctgt
      721 tgcaaaacgt ttctgacgct ccaggactgc atctatctcc ttataaaaat atccttcaac
      781 ttggctggtc atagccaggg tctggacgat caccacgtaa tccaccagtt tctcgatgac
      841 atggacgagt tgccgatccc aattgtcgcc tgcccgcagg ttctgtttgt cctgccaggt
      901 atcgatgccc gccgtccgca gccgttggtt aagttgttct acctggtcac ggtcctcgct
      961 ggcgtaacaa agaaagacct tgggcgcatt gggcggtggt ttgggcgcaa cgcctggttt
     1021 cttggctact gacccctcat aggtgttacg tagtttcttg gcaaattcca gccacgagag
     1081 ctgatcgaat tcgatgagat gttcattggc ataaaatact accgtctgct gataatccgg
     1141 atgcgcgaag aaggtttgat cttctagcgc gaacgagcga ttgcgacggc cgtgggcatt
     1201 gagcacgtgg agcagaatgc gattatgcca ctgctgaaaa ccaaatcaga caaagagaaa
     1261 actggtatcg gaattagcga attggctgcg gataaacgga ggcaactcag tactcccttt
     1321 gatgacattg accaggaact ccaggcgatc gttctcgatc aataccagcg attctggctc
     1381 tgtgcggctc ccatacaaat cataaacaag cggttctttt acagttggtt tgac
//
LOCUS       DASQSL010001158         1370 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_130406, whole genome shotgun sequence.
ACCESSION   DASQSL010001158 DASQSL010000000
VERSION     DASQSL010001158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1370
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130406"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..122
                     /locus_tag="VE844_11945"
                     /pseudo
     CDS             1..122
                     /locus_tag="VE844_11945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011218531.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
     gene            330..1256
                     /locus_tag="VE844_11950"
     CDS             330..1256
                     /locus_tag="VE844_11950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014086595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZC02036.1"
                     /translation="MQPVISISNLSKTYTSGFQALKSIHLDIRRGEIFALLGPNGAGK
                     TTLISIICGIVTPSEGTVSVDGHDIVTDYRAARSMIGLVPQELTTDAFETVWATVTFS
                     RGLFGKPANPDHIAKVLKDLSLWDKKDSKIMTLSGGMKRRVLIAKALSHEPQILFLDE
                     PTAGVDVELRKDMWQVVRSLRASGVTIILTTHYINEAEEMADRIGVINKGEIILVEEK
                     AELMHKLGKKQLTLQLHNKLDAIPAKLAAHRLDLTADGDELIYTYDTQGERTGITALL
                     NDLNHAGIRFRDLNTSQSSLEDIFVDLVRQRK"
     gene            1253..>1370
                     /locus_tag="VE844_11955"
     CDS             1253..>1370
                     /locus_tag="VE844_11955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HZC02037.1"
                     /translation="MNLRAVRAIYMFEMARTGRTLLQSIVSPVISTSLYFVVF"
BASE COUNT          321 a          385 c          375 g          289 t
ORIGIN      
        1 gcattttggg gtgacgttgg tcagctccat tgtgtatcca cctcatcatt agccaggtca
       61 ctcaaccgtt agtgttagag cagttgcgcg agtggggcat tgacatttcg gcggggcagg
      121 tcgaggcgtg gctttcaggc aagcacgtat tacgcgacgc cgaagaatat cgtcgagcgc
      181 gcgaaggaca tcatcaagct gtagcacgag cgagcttcgc gatccaggcc gtggactcat
      241 gaacacggag cgcggttcag aggaccgttt ccccgtcatc cacattcggg cttaacgaga
      301 cgttttatgc atcagctatc gtcactcgca tgcagccagt catttccatc tcaaatctct
      361 ccaagaccta cacctccggt tttcaggctc tcaagagcat ccacctggac attcgccgcg
      421 gagagatttt tgccctgctg ggtccgaatg gcgcaggcaa gacgaccctg atcagcatca
      481 tttgcggcat cgtgactccg tccgaaggta ctgtctcggt agacggtcat gacatcgtca
      541 cggactaccg tgccgcccgg tcgatgattg gtcttgtgcc gcaggaactg acaactgatg
      601 cattcgaaac agtttgggcg actgtgacct tcagccgtgg gctattcggc aaaccggcca
      661 accccgatca catcgcaaag gtgctcaagg acctgtcctt gtgggataaa aaagacagca
      721 agatcatgac gctttccggc ggcatgaagc gccgggtgct gatcgccaag gccctatcgc
      781 acgaaccgca gatactcttt ctcgacgagc cgacagccgg tgtcgatgtc gagctgcgca
      841 aagacatgtg gcaggtcgtg cggtcgttgc gcgcctctgg cgtgactatc atcctgacca
      901 cccactatat caacgaggct gaagaaatgg ccgacaggat cggcgtgatc aacaaggggg
      961 aaattattct ggtcgaggaa aaagccgagc tcatgcacaa gctcggcaag aagcaattga
     1021 cgctccagct acacaacaag ctcgacgcca tacctgccaa actcgctgcc caccggctcg
     1081 acctgacagc ggatggcgac gaactgattt atacctatga cacgcaaggc gagcgtacgg
     1141 gaatcacggc attgctcaat gacctcaacc acgcggggat caggttcagg gatctcaaca
     1201 cgtcgcaaag ctccttagaa gacatctttg tcgacctggt gagacaaaga aaatgaacct
     1261 tcgggcagta cgcgcaattt acatgttcga gatggcgcgc acggggcgca cgctgttgca
     1321 aagcatcgta tccccggtta tttcgacgtc cctgtacttt gtggtctttg
//
LOCUS       DASQSL010001159         1275 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_9756, whole genome shotgun sequence.
ACCESSION   DASQSL010001159 DASQSL010000000
VERSION     DASQSL010001159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9756"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..732
                     /locus_tag="VE844_11960"
     CDS             <1..732
                     /locus_tag="VE844_11960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014719172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M4 family metallopeptidase"
                     /protein_id="HZC02038.1"
                     /translation="FFWEAYDRNSIDDEGLPLDATVHYGQQYDNAFWDGRRMVFGDGD
                     GEIFNRFTVAVDVIGHELAHGVTEDEAGLIYNAQAGALNESMSDVFGSLVKQRPLRQT
                     ADQADWLIGAGLLTSNVRGVALRSMKAPGTAYDDPMLGKDPQPAHMRDYVRTDRDNGG
                     VHINSGIPNHAFYLVATRLGGQAWERAGRIWYETLRDSQLRPNTGFQRFAGLTVTVAG
                     RLYDTGSPEQQAVREGWNQVGIALT"
     gene            854..1177
                     /locus_tag="VE844_11965"
     CDS             854..1177
                     /locus_tag="VE844_11965"
                     /inference="COORDINATES: protein motif:HMM:NF042532.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protealysin inhibitor emfourin"
                     /protein_id="HZC02039.1"
                     /translation="MRVEFTMEGGLAHFPGLSKPVVIESSQLSEEEAAELGRLVEATR
                     FFDLPPKVDIPPHGAADYRRYTVTIQAGARRHTVELTDPVKTPELQGLLSFLKVKARE
                     LRAPR"
BASE COUNT          260 a          337 c          402 g          276 t
ORIGIN      
        1 tttttctggg aagcctatga tcgcaactct atcgatgatg aaggattgcc gcttgatgcc
       61 acggtccact acggccagca gtacgacaac gccttctggg atggacggcg catggttttt
      121 ggtgatggcg atggggagat cttcaatcgc ttcactgttg cagtcgatgt gatcggccac
      181 gagctcgccc atggcgtcac cgaggacgaa gcgggattga tctacaacgc tcaggccggg
      241 gcgctgaacg agtcgatgtc cgatgtgttc ggttcgctgg tgaaacagcg tccactccgt
      301 caaaccgcgg accaggccga ctggctgatc ggcgcgggac ttttgaccag caatgtcagg
      361 ggggtggcgc tgcgctcgat gaaggccccc gggacagcct atgacgatcc gatgctcggc
      421 aaagacccgc aacctgcgca tatgcgcgac tacgtccgta ccgaccggga taacgggggc
      481 gtgcatatca attccgggat ccccaatcat gccttttacc tcgtagccac ccgactcggc
      541 ggacaggcct gggaaagagc cggccggatc tggtacgaga ccttgcgtga ttcccaactg
      601 cggcccaaca ccgggttcca gcgctttgct gggctcactg taaccgttgc gggacggctc
      661 tatgatacgg gaagccctga gcagcaggcg gtccgtgagg gttggaacca ggtagggatc
      721 gccctcacgt aagcgggtga gacttcaatg ggcggagcgt atgtcccggc tgtgggagac
      781 agcttatgcg gtgcttttca ttggtctggt tttgtcattt tgccgtgctt gcaccttaga
      841 ggaagacatg ccgatgcggg ttgagtttac gatggaaggc gggctcgccc acttcccagg
      901 cttgagcaaa ccggtggtga tcgagagcag ccaactttcc gaggaggaag ccgcggagct
      961 tgggcgattg gtagaggcca cccggttttt cgatctgccg ccaaaggtgg atataccgcc
     1021 tcacggagcc gccgattatc gccgctacac cgttaccatt caagcggggg cacggcggca
     1081 taccgtagag ctcaccgatc cggtcaaaac gcccgagtta caaggcttgc tgagctttct
     1141 taaggttaaa gcccgggagc tacgtgctcc acgatgagtt gggagttatt agggtagtat
     1201 tagaagggta gtttagggga cagaccatga tgtttgtgtc atggtatatg cggccctaaa
     1261 atcacgactg tattt
//
LOCUS       DASQSL010001160         1173 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_146048, whole genome shotgun sequence.
ACCESSION   DASQSL010001160 DASQSL010000000
VERSION     DASQSL010001160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1173)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1173)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146048"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            128..583
                     /locus_tag="VE844_11970"
     CDS             128..583
                     /locus_tag="VE844_11970"
                     /inference="COORDINATES: protein motif:HMM:NF024776.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC02040.1"
                     /translation="MHKPLPLITELADTLKQRLQREHDGRKKPRLQMLYLLASGQAQS
                     RREVAQLLGVHRNTIGHWLALYEAGGLEALLAVYVPAGKPLSLPPGVLAAIEQALRQP
                     AGFASYEALRQWVQQTFHLEVHYHTLYTIVRTRFKAKLKVPRPSHTKKP"
     gene            621..>1173
                     /locus_tag="VE844_11975"
     CDS             621..>1173
                     /locus_tag="VE844_11975"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC02041.1"
                     /translation="MQHAIPSENTRPVRVFSQDESRVGLLTVRRRRLTACGVQPVGLI
                     QHTFEWFYIYGAVAPTTGERFFLELPYLNADTFQLFVDAFAQAFPDSFNILLVDNSGA
                     HTAQRIRWPANVQPVWLPPYCPELNPIERVWRDVKDDLAWQQFVDLEAQQVYVGNLLQ
                     AYDAPTLQALTSYAYLVEAIHALC"
BASE COUNT          230 a          365 c          329 g          249 t
ORIGIN      
        1 tcatcctggg ccaattcgat ggacgggtct ggttggttgg gcgcctctta tatgcgtttt
       61 gattgaacag agtgcatggt gctgctatcc ttgctgatgg tttcagcggt cgttaggaga
      121 gcaggcgatg cacaaacctc tacccctcat taccgagctt gcagacacgc ttaagcagcg
      181 cttacaacgt gaacatgatg gacgtaagaa accacggctc caaatgctct acctcctggc
      241 cagtgggcaa gcgcagagcc gccgggaggt agcccaactg ttgggggtgc atcgcaacac
      301 catcggccac tggctggccc tctacgaagc gggtggcttg gaggctttgc tggcggttta
      361 tgtcccggct ggcaagccgc tctcgctgcc cccaggtgtg ttggccgcca ttgagcaggc
      421 cctccggcag ccagccgggt tcgcctccta tgaagcgcta cggcaatggg tccagcagac
      481 ctttcatctg gaggtccact atcacacgct ctacaccatc gtgcggaccc ggttcaaggc
      541 caagctcaag gtcccacgcc ccagtcacac caaaaaaccc tgaggccatt gccacatttc
      601 gggcaacctg tcaggagcag ctgcagcatg ccattccctc ggagaatacc cgcccggtgc
      661 gcgtgttcag ccaggatgaa agccgtgtgg ggttactcac cgtgcgccgc cgacggctga
      721 cggcctgcgg ggttcaaccc gtggggctga tccagcacac gttcgaatgg ttctacatct
      781 acggcgccgt ggccccgacc acgggcgagc ggtttttcct agagctgccg tatctgaacg
      841 ccgacacctt ccaactcttc gtagacgcct tcgcgcaggc cttccccgat agcttcaata
      901 tcctgctcgt cgataacagt ggagcccata ccgctcaacg gattcgatgg cctgcaaatg
      961 tgcagcccgt atggctcccc ccctactgtc ccgagctcaa cccgattgag cgggtctggc
     1021 gtgacgtgaa agacgacctg gcctggcagc aattcgtcga tcttgaggca caacaggtct
     1081 atgtcgggaa cttgttgcag gcctatgacg cgcccactct gcaagccctg actagttacg
     1141 catatttggt ggaagccatt catgcactat gtt
//
LOCUS       DASQSL010001161         1406 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_158989, whole genome shotgun sequence.
ACCESSION   DASQSL010001161 DASQSL010000000
VERSION     DASQSL010001161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1406
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158989"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            118..>1406
                     /locus_tag="VE844_11980"
     CDS             118..>1406
                     /locus_tag="VE844_11980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010943386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit A"
                     /protein_id="HZC02042.1"
                     /translation="MSSDFILIKGARQNNLKGFDLRLPLNELIVVTGVSGSGKSSLAF
                     DTIYSEGQRRYVETFSPYARQFLDRMDKPQVDRIEGIPPAIAIDQRNPVRTSRSTVGT
                     MTELNDHIKLLFARAAQLYCRGCGRKVTQDSPDSIYEQLLASIAADPSCEKPGPRILI
                     TFAIAIPTNFSEEEVRVLLARQGYTRIHQRRGQRLEVIQDRVRFGEESRGRIVEGLEA
                     ALKHGQGRVTVYPLDDEGHTEAPWRFSTELHCPDCDIPYSAPIPNLFSFNSPIGACET
                     CRGFGRTIHVDYSRVVPNESRTLAEGAVKPWQTESYQECQDDLMRFARRRGIPTNVPW
                     RELTEHERRWVLEGEGDWEEGLWYGVSRFFRWLETKGYKVHIRVLLSKYRAYTTCPAC
                     LGARLKPEALLWRLGTQADTDRVRMPENYFRPASMDIS"
BASE COUNT          297 a          423 c          413 g          273 t
ORIGIN      
        1 tcgagtgaat gatgatacag cgctatttag aatgatagcc acctttagct aagcctgcat
       61 gaatgtctgg aaccatcacc tgctatcgat catgaatacc aggagaccct agagagcatg
      121 tctagcgact ttattctgat aaaaggggcc cggcagaaca atctgaaggg gttcgaccta
      181 cggctgccgc tcaacgagct cattgtcgtc acgggtgtga gcggctcagg caaatcctca
      241 ctcgcctttg acacgatcta ttctgaaggg cagcggcgct atgtggagac cttctcgccc
      301 tatgcccgac agtttctgga ccgcatggat aagccccaag ttgaccgcat cgaagggatc
      361 ccgcccgcca tcgctatcga tcagaggaac ccagtccgga cctcgcgatc cacagtgggc
      421 acgatgaccg agctcaacga ccacatcaag ctcctcttcg cccgagcagc ccaactctac
      481 tgccggggtt gcggacggaa ggtgacacag gattcgccgg acagtatcta cgagcagctg
      541 ttggccagca ttgcagcaga tccgtcttgc gagaaacccg gaccgcgcat actgatcacc
      601 tttgcgatcg ctattcctac caacttctcc gaagaggagg tgagggtgct gctcgcacgc
      661 cagggctaca cccggatcca tcagaggcgc ggccagaggc tcgaggtgat ccaggaccgc
      721 gtgcgctttg gggaagagtc acggggacgc atcgtggaag ggctggaggc cgcgctcaag
      781 catggccagg gccgtgtgac tgtttatccc ctcgatgatg aaggccacac cgaggctccg
      841 tggcgcttct ccactgagct tcactgtccc gattgcgaca ttccctattc agcccccatc
      901 cctaatctct tctctttcaa ctcaccgatc ggcgcctgtg aaacgtgccg tggcttcggc
      961 cggaccatac acgttgacta tagccgggtg gtgcccaatg aaagccggac gctggctgag
     1021 ggtgcggtga agccctggca gacggaaagc taccaggagt gccaggacga tctgatgcgc
     1081 tttgcgcgcc gacgcggcat ccccaccaac gtgccctggc gcgagctcac cgagcacgag
     1141 aggcgctggg tgctcgaagg cgaaggagac tgggaagagg gcctctggta cggagtgagc
     1201 cggttctttc gatggcttga gacgaagggc tacaaggtgc atatccgggt cctgctctcg
     1261 aagtaccgtg cctatacgac gtgcccggcc tgccttgggg cgcggctcaa gccagaggcg
     1321 cttctgtggc gccttggcac ccaagccgat accgaccgtg tacgtatgcc tgagaactac
     1381 ttcaggcccg cctcgatgga catatc
//
LOCUS       DASQSL010001162         1341 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_186787, whole genome shotgun sequence.
ACCESSION   DASQSL010001162 DASQSL010000000
VERSION     DASQSL010001162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1341)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1341)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1341
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186787"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(183..380)
                     /locus_tag="VE844_11985"
     CDS             complement(183..380)
                     /locus_tag="VE844_11985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02043.1"
                     /translation="MLEVVQWWRARKVSRVDAGGPRDTQRWTVHVDKCWIARVKAQTE
                     LEGVSQAEIVDRALRQYFEGR"
     gene            complement(640..909)
                     /locus_tag="VE844_11990"
     CDS             complement(640..909)
                     /locus_tag="VE844_11990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02044.1"
                     /translation="MEDTAIQQKIQEKLQGGLLTIHGGLSPETILFVHVMNGTGAPCS
                     ACDEPIMPVEARVIYHTLYKQTLQFHGICERLWKETGARDQHEHP"
BASE COUNT          273 a          408 c          370 g          290 t
ORIGIN      
        1 ggatggcctc gactctctct cgacccctcc gggacagtat accctacatc acggtccctc
       61 gactggggcc atgtctctca gcacgttcga cccgcgaaaa cgtccgacac acaaggctgt
      121 tctgtataag caaaccgcgt catactggag cagaaaagta gtatagcgtg caacataaga
      181 agttaccgcc cctcaaagta ctgccgcagc gcccggtcca cgatctctgc ctggctcacc
      241 ccttcgagct ccgtctgtgc cttgacccgc gcaatccagc acttatccac gtgcacggtc
      301 cagcgctggg tatccctggg tccacccgcg tccacccgcg acactttgcg ggcacgccac
      361 cattgcacga cttcgagcaa atcggccttg atggcgtcga gctctgccgg cgtctggggc
      421 gatggtccac ctgagggata cctggtccac cccgaggcat gacggtgggt gtcccccggt
      481 ggacctccac agggtgcagg tgtttcaggt gaccctgcag ggtgctgcgg gggatcccca
      541 gccggcgggc gatctcccgt tgggagacgc cttgcgcaag gagtctgcgg agctggaccg
      601 catcaatggc gtggggcatg acgattcctc aagccgtgat cacggatgct catgctggtc
      661 acgcgcacct gtttccttcc atagccgctc acagatgcca tgaaactgca gggtttgctt
      721 atagagggta tgatagatca cccgtgcctc cacgggcata ataggctcat cacatgcgct
      781 acacggggct ccagtgccgt tcatcacatg cacgaagagt atggtctcag gtgagaggcc
      841 accatggatc gtgaggaggc cgccctgaag tttctcctgg atcttctgtt gaatcgcggt
      901 gtcttccatc catccagctc ctcctcgaca caggatgtag acttggtgga ctcggtagac
      961 ctcgtggttg ctgattaaac cctgccccat gaggtggacg caacgtccac ccggtggacc
     1021 ctcctgtttt tgccccttcg cgtggggtgg ccgcggccac ggtcacctac tctccgagtg
     1081 tgaccttcct ggtctctgga ggaagtggcg gaatatatag agacatgtcc accaggaccg
     1141 aaaccaggac gaccgcggag gaacaaagct aattcgttac caggtaagga attagcttct
     1201 cacaccaaac ctgagaaagc gagaccgcgc ggcaataatg cggagtgctg aaaaacttct
     1261 ggggcttttt gggcaattct cgccgcacgg tattcagtgt catttccttg agctctatta
     1321 ttactaagta acaattcttt c
//
LOCUS       DASQSL010001163         2161 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_130473, whole genome shotgun sequence.
ACCESSION   DASQSL010001163 DASQSL010000000
VERSION     DASQSL010001163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2161
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130473"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            386..1771
                     /locus_tag="VE844_11995"
     CDS             386..1771
                     /locus_tag="VE844_11995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014560958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HZC02045.1"
                     /translation="MHNAISSWALRLSIVGLGLFVILGSDRFLFAQRTPVVYVAPIEG
                     IIDLGLAPFVQRVLNEATQEGAAAVILEINTFGGRVDAAVLIRDALLNAKVRTVAFIN
                     KRAISAGALISLAAEKIVMADGGTIGAATPVQMGQPGAPAQPVEEKAVSYVRKEFSAT
                     AETRKRPPLIAEAMVDADVGIPGLIEKGKLLTLTTDEAMKHKVADFRAQTIESVLDQL
                     DLAGAQVRRASPNWAENLVRFLTNPIISSLLITIGMLGIILEIRTPGFGVPGGLGIAS
                     LALFFWGHWLVQLAGWEELLLFGSGLVLLVLEVFVIPGFGVVGALGIVALLAGLSLSL
                     IGGGATGEFVLKAVGRVVFSLLIALIASLVTLRFLPRLPFGRRLILETGLLAGAGGGS
                     APESDRNWLGKSGTALSPLRPAGIAEIEGKRVDVVSDGELIEPGVPIVVTRVDGNRIV
                     VRRHRVSTERG"
     gene            1774..>2161
                     /locus_tag="VE844_12000"
     CDS             1774..>2161
                     /locus_tag="VE844_12000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin-like FloA family protein"
                     /protein_id="HZC02046.1"
                     /translation="MFGIETGVAGGFALLVLLIVGLVFILYLIPLPLWIAAWASSAYV
                     GLFTLIGMRLRRVPPGTVVTARISAVKAGLDFPLNDLEAHYLAGGNVVRVVNALISAD
                     KANIPLPFKRAAAIDLAGRDVLEAVKM"
BASE COUNT          419 a          568 c          679 g          495 t
ORIGIN      
        1 ctggaatata ccgattcggg gggatatgca aaaataccca aaatcagcgt cggttcgaca
       61 aaaggatcgt ttttccgtac cgaggtcgac cactggcaat ctcttagcga ccaaaatttc
      121 gcgtttacta tgaaaaggcc atctcctgct gcatagttat ctcaaaaggc tactgtagca
      181 ctcaactccg tgagccagtt actctaacta actgaaaccc agcgctttgg cgcgctaaca
      241 aagactttgg gggcaaagcc ccttattcga agaaagatat gcggatttgg tcctgagatt
      301 tcaggttata ctttgaactg gctgaagtaa aatccaaaga aggggcgata gcttacgctt
      361 attgatagac gtagaagtgc gcttcatgca taacgctata agcagttggg cgctgcgatt
      421 gtcgattgtc ggcctcgggc tgttcgtcat cctaggatcc gacaggttcc tcttcgctca
      481 gcggacgccc gtggtttacg ttgcgccgat cgagggaatc atcgaccttg ggctcgcgcc
      541 gtttgtccag cgggttttga atgaagcgac gcaagagggc gcggcggccg tcattctcga
      601 gatcaatacc tttggtgggc gggtggatgc ggcggttctc atccgcgatg ctttgttgaa
      661 cgctaaggtc cggacggtcg cgtttatcaa caagagagct atctccgcgg gcgccctcat
      721 cagtttggct gccgagaaga tcgtcatggc cgacggcgga acgatcggcg ccgcaacccc
      781 ggtgcaaatg ggacagccgg gcgcgcccgc tcagccggtg gaggagaagg ccgtctccta
      841 tgtacgaaag gaatttagcg cgacggctga gacgcgcaag cggccgccgc ttattgccga
      901 ggcgatggtg gacgcggacg tggggatccc cggtctcatc gagaaaggaa agctcctgac
      961 gctgaccacc gacgaagcca tgaagcataa ggtcgcggat tttcgcgccc agaccataga
     1021 gagcgtgctg gatcagttgg atcttgcggg ggctcaagtg aggcgggcgt cgcccaactg
     1081 ggcggagaat ttagtccgct tcctcacaaa tccaataatc agttctcttc tcattacgat
     1141 cggcatgctt gggattatcc tggaaatccg aacgcccggc ttcggcgtgc ccggaggcct
     1201 cggtatcgca agcctggccc ttttcttttg gggccactgg cttgttcagt tggcgggctg
     1261 ggaagagctg ctgctgttcg gttccggact cgtgctcttg gtcttagaag tttttgttat
     1321 tccgggcttt ggtgtcgtcg gggctctggg gattgtcgcc ctcctggcgg gcctcagcct
     1381 gagcttgatc ggaggtgggg ccacggggga gttcgtcctt aaagcagtgg gtcgcgtcgt
     1441 tttttctctg ctcatagcat tgattgcaag tctggtcacg ctgcgcttct tgccgcgcct
     1501 gcctttcggg cgacgcttga tcctggagac ggggctacta gcgggcgcag gaggcggctc
     1561 ggcgcccgag agcgatagaa actggctggg taaaagcggg acagcgctct ctccgcttcg
     1621 accggcaggg atcgcagaaa ttgaaggcaa gcgtgtggat gtggtgtccg atggggagtt
     1681 gatcgagcct ggggtgccga tcgtcgtgac ccgcgtggat ggcaaccgta tcgtcgtccg
     1741 gcgacaccgc gtatcaacag aaaggggtta aaaatgtttg gaatcgaaac cggcgtggcg
     1801 ggaggcttcg cgttgctagt gctgctgata gtggggttgg tttttatctt atatctcatc
     1861 cccctcccgc tctggatcgc cgcttgggca tcgagtgcat acgtgggact ttttaccctc
     1921 atcggaatgc gcctgcgtcg cgtgccgccc ggcacagtgg tcacggcgcg gatcagcgcg
     1981 gtcaaggccg gattggattt tcccctcaac gatctggagg cccactacct ggcgggcgga
     2041 aacgtcgtga gggtggtgaa cgccctgatc tcggcggaca aggctaacat ccctttgccc
     2101 ttcaagcggg ccgccgccat cgatctggcc ggccgcgatg tgttggaagc ggtcaaaatg
     2161 t
//
LOCUS       DASQSL010001164         1133 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_77011, whole genome shotgun sequence.
ACCESSION   DASQSL010001164 DASQSL010000000
VERSION     DASQSL010001164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77011"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            219..449
                     /locus_tag="VE844_12005"
     CDS             219..449
                     /locus_tag="VE844_12005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02047.1"
                     /translation="MVIRDVCPRCKSSKYKKNGHIHTGKQNHHGHDCGRQFVQCFVPY
                     RISEDTRGLIKRLLVERISLRGICRAVGVGLK"
     gene            453..968
                     /locus_tag="VE844_12010"
     CDS             453..968
                     /locus_tag="VE844_12010"
                     /inference="COORDINATES: protein motif:HMM:NF015365.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HZC02048.1"
                     /translation="MGFLVQCVEALPDHLNIQPLPCDGDVMIRRLEVEADEMASFVQK
                     KAHKQWVWIAMDAKTRQVIAFHVGDRSRRSAKRLWAKIPQAYRQHATFYTDQYVVYAG
                     VIPAAQHRAISKLARKTNHVERFKNTLRQRVSRLVREALSFSKKLVNHAGAIKLFICH
                     YNLMKAPALHG"
BASE COUNT          254 a          305 c          333 g          241 t
ORIGIN      
        1 ggcggcggcc gtcgaggggt ttcaggggat cgccggggcc gtgtggcacg tcacgctggt
       61 gtaccaaaac gtccacgaga tctccctgag ccgatgggac ggggtcgcga cgctgcaccc
      121 ctagccgtgg gtagtgcgct cgatgtaatg ctcgcctgat gatgctgtgc tactgttgac
      181 caaaacgcgt cctcatccag tggaggtcaa caaaagccat ggtcatccga gacgtctgcc
      241 cgcggtgcaa atcttccaag tataagaaaa acgggcacat tcacaccggc aaacaaaatc
      301 atcacggcca cgactgtggg cgccagttcg tccagtgctt cgtgccatac cgcatctcgg
      361 aggacacgcg tgggctcatc aaacgcttgc tggtcgaacg gatttcgttg cggggcattt
      421 gtcgcgcggt gggtgtcgga ctcaagtagc tcttgggctt tctcgtccag tgcgtggagg
      481 cactaccgga tcatctcaat atccaacccc ttccctgtga cggtgacgtg atgattcgac
      541 gccttgaggt ggaagcggat gagatggcca gctttgtaca gaagaaagcg cacaaacagt
      601 gggtgtggat cgccatggat gccaagacac gccaagtcat tgcgtttcat gtgggagatc
      661 gcagccgcag gagtgccaag cgactatggg cgaagattcc tcaagcgtac cgtcaacacg
      721 ccacgtttta cacggatcaa tatgtcgtgt acgcaggggt gattcccgcg gcgcagcatc
      781 gggcgatcag caagttggcg cgcaaaacca atcacgtcga gcgcttcaag aatacgctgc
      841 gacagcgcgt atcccgtctg gtacgcgagg cgttgtcgtt ttccaagaaa ctcgtgaacc
      901 atgccggtgc cattaagctc ttcatctgtc attacaatct gatgaaagct ccagcattac
      961 atggatagca ctacccgcta agtacccgct tgccgacgtt tgtgtggtta agtggcgtgc
     1021 ggtgggcgat cgaacagggt tttgaagagg cgaaaaccga actcggcatg gatcattatg
     1081 aagtgcgcaa ataccccagc tggcatcatc acatgctgat ctgtatgctc gcg
//
LOCUS       DASQSL010001165         1034 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_114266, whole genome shotgun sequence.
ACCESSION   DASQSL010001165 DASQSL010000000
VERSION     DASQSL010001165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1034
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114266"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..941)
                     /locus_tag="VE844_12015"
     CDS             complement(<1..941)
                     /locus_tag="VE844_12015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017364316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02049.1"
                     /translation="MGKREDILRADLPIALGAACVFLLGLTTASANAAPLPSQEEMWR
                     IIQAQQREIKALKAKLQQPETQSAEAPQAIPQKPQEPAQKEQKVEELERKAGVLAEEV
                     EKLRTQLVIPEEPKYKSVYGLGPAASKVYQVSKGISIGGYGEAFYQSLVEDEGDRSDS
                     ADLVRLVLYAGYRFTDRILFNSEIEFEHATTGEGDEEKGEVSVEFANLDFFLHPLANI
                     RAGLVLIPVGFINEIHEPPFFHGNNRPEVERRIIPSTWREIGVGLFGELLPGLQYRIY
                     AVNGLDARDFDSESAIREGRQSGSGVKAEDLAFTGRV"
BASE COUNT          197 a          320 c          256 g          261 t
ORIGIN      
        1 tccacgcgtc ccgtgaaagc gagatcctct gccttcactc cgctcccact ctggcggccc
       61 tcgcggatcg cactttccga atcaaagtca cgggcgtcca agccattgac cgcatagatc
      121 cggtattgca aaccgggcag cagctcaccg aagagaccca cgccgatctc gcgccaagtg
      181 gacgggatga tgcgccgttc tacctcgggc ctgttgtttc catggaagaa agggggctca
      241 tggatctcgt tgatgaagcc cacggggatc agcaccaggc cagcacgaat attggccagg
      301 ggatggagga aaaaatcgag gttggcgaat tctacggaga cctcaccctt ctcctcgtct
      361 ccttccccgg tagtggcatg ctcgaactcg atctcactgt tgaaaaggat cctatcggtg
      421 aacctgtaac cggcgtaaag caccaggcgc acaagatccg cgctgtcgct cctgtccccc
      481 tcatcctcca ccaggctctg ataaaacgcc tcgccatagc cgccgatgga gattccctta
      541 ctgacctggt agaccttcga ggccgccggt cccaggccat acacgctctt gtacttgggc
      601 tcctcgggta tgaccaactg ggtcctcaac ttttccacct cctctgccag gacgccggcc
      661 ttgcgctcca gctcttctac cttttgctct ttttgggctg gctcttgcgg cttctggggg
      721 atcgcttgcg gcgcttcggc ggattgtgtc tcaggctgtt gcagtttcgc tttaagcgcc
      781 ttaatctccc tttgctgagc ctggatgatg cgccacattt cctcctgact gggcagcgga
      841 gcggcgttcg cgctcgcagt ggttaatcct aacaaaaaca cacacgcggc gcccaaggct
      901 attggtaagt ccgctcttaa aatgtcttct cttttcccca ttttttcact ccttttaatt
      961 ttttaattag cccacgattt taagtgtttg tttttcagtg tgacggtaag acttcatcac
     1021 accgctatgg ctta
//
LOCUS       DASQSL010001166         1060 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_114270, whole genome shotgun sequence.
ACCESSION   DASQSL010001166 DASQSL010000000
VERSION     DASQSL010001166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114270"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(135..>1060)
                     /locus_tag="VE844_12020"
     CDS             complement(135..>1060)
                     /locus_tag="VE844_12020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02050.1"
                     /translation="PLTKPFEYLTLNGKLRLYALRDCADQLRRLHGISIYIANRERLN
                     DIYIVTARAKDRQGREDESTGAVTVGHLKGDALANALMKAETKAKRRVTLSIAGLGWL
                     DETELETIPQGQPVAAAQKESPVAETPTADQISSLVELARSCVIDLASFGKHMRQLMD
                     LSEETKITKKFLRETMTMAQFDSAWQHYNEVLKKHVEEDVLDYPPPVDDASPGESEAV
                     TSPIGAGQETDPSEPTSAAEAHSDGPYATPQQIASLKLLAKQVGDDAYADVQDMLDHH
                     PEGLVASVYEIIKQRLKARKAAKKQEPVVER"
BASE COUNT          181 a          308 c          323 g          248 t
ORIGIN      
        1 agacccgagc cagggagagg ccactcaggc gggcttggca tcgtcgtgtc atggtggttt
       61 aggcggagga tcaggaagga aacactcgat cagtgtcagc gccaggaggg cagagaacgc
      121 ctcagagttc agccctagcg ttcaaccaca ggctcttgct tcttcgccgc tttgcgggct
      181 tttagtcgct gcttgatgat ctcatatacg ctcgcgacta agccctctgg gtggtgatcc
      241 aacatgtcct gcacgtccgc ataagcatca tcgcctactt gcttcgccag gagtttgagg
      301 ctggcgatct gttgcggtgt ggcgtaaggg ccgtcggagt gagcctcagc ggcggaggtc
      361 ggctcggacg ggtccgtctc ttgtcctgcg cctattgggc ttgtcacggc ttcagattcc
      421 cccggcgatg cgtcgtctac aggaggggga taatccaaga catcttcctc gacatgtttc
      481 ttcagcactt cattatagtg ctgccaagcg gagtcgaact gcgccatcgt catggtttcg
      541 cgcagaaact ttttcgtaat tttggtctct tcggagaggt ccatcaactg ccgcatgtgc
      601 tttccaaagc tcgcaaggtc gatgacgcag gatctcgcca gctcgaccaa agagctgatt
      661 tgatcggctg tcggggtctc tgctaccggt gactctttct gagctgccgc gaccggctga
      721 ccttgaggaa tggtctctaa ttccgtttcg tccaaccacc ccagccccgc gatggagagc
      781 gtgacccggc gcttggcctt ggtctccgcc ttcatgagcg cgttggcgag cgcatcccct
      841 ttgaggtggc ccaccgtcac cgccccggtg ctctcgtcct cgcgcccctg acggtccttg
      901 gcgcgggcgg tgacgatata aatatcgttc agccgctccc ggttggcgat gtagatgctg
      961 atgccgtgca gccggcgcaa ttgatccgcg cagtcgcgca aggcgtacag ccggagcttg
     1021 ccgttcaggg tgaggtactc gaagggcttg gtgagcggat
//
LOCUS       DASQSL010001167         2799 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_62058, whole genome shotgun sequence.
ACCESSION   DASQSL010001167 DASQSL010000000
VERSION     DASQSL010001167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2799)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2799)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2799
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62058"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..320)
                     /locus_tag="VE844_12025"
     CDS             complement(<1..320)
                     /locus_tag="VE844_12025"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012549.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HZC02051.1"
                     /translation="MEELAARLNRRFGGKLVHGPTKVGQITVELPAQNLLPVCKILKE
                     APEFAFEQLVDLCGVDYSTYGQADWQTEDASRLGFSRGVDPRAYEEREVNRPRFAVVY
                     HLLSL"
     gene            complement(362..838)
                     /locus_tag="VE844_12030"
     CDS             complement(362..838)
                     /locus_tag="VE844_12030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019897868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HZC02052.1"
                     /translation="MGIEGVLEKGVVTTTIDNVVNWARTGSLWPMTFGLACCAVEMMH
                     AGAARYDLDRFGVMFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMAEPRWVISMGSC
                     ANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGVLQLQNKIKRTNTIAR"
     gene            complement(829..1185)
                     /locus_tag="VE844_12035"
     CDS             complement(829..1185)
                     /locus_tag="VE844_12035"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009566650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HZC02053.1"
                     /translation="MLEHYLPIFIFLVVAVLLGIAVLMAGYIFGPHRPDDEKLSPYEC
                     GFEAFEDARMKFDVRYYLVAILFIIFDLEIAFLFPWAVALKEIGGLGFWAMMIFLAVL
                     VVGFIYEWKKGALEWE"
     gene            complement(1231..1315)
                     /locus_tag="VE844_12040"
     tRNA            complement(1231..1315)
                     /locus_tag="VE844_12040"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1279..1281),aa:Leu,seq:gag)
     gene            complement(1337..1894)
                     /gene="secG"
                     /locus_tag="VE844_12045"
     CDS             complement(1337..1894)
                     /gene="secG"
                     /locus_tag="VE844_12045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006474951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HZC02054.1"
                     /translation="MQPWFLGLHILIALTLIGLILLQHGKGADVGAAFGSGASSTIFG
                     ARGSASFLSRATAILAFLFFSNCFFLGYLASTAQQKSLMERIQVTPKDEKSAGGVEVQ
                     DIQVKKVEPQDQTSDLPAVPRPESEAADVPPAPTQAGAGATEDKAEHDTAKKKKVEEA
                     ETRPSPPVSPETKNSEAPAKPAAPQ"
     gene            complement(1897..2661)
                     /gene="tpiA"
                     /locus_tag="VE844_12050"
     CDS             complement(1897..2661)
                     /gene="tpiA"
                     /locus_tag="VE844_12050"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006788534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HZC02055.1"
                     /translation="MRQPLVAGNWKMNGSLTEVRSLIEGIKRGIGSGIKAEVAVCPPF
                     VYLALVSEHLKGTPIKLGAQNLSPQDKGAFTGEVSGLMLKDYNCEYAIVGHSERRRLF
                     GETDALIAEKFAQALKVGLTPILCVGELLEEREAGQTEAVVSRQVQTVLERAGVRAFN
                     GAVVAYEPVWAIGTGRTASSEQAQEIHAFIRALIAAKAHGVAKNLRILYGGSVNVANA
                     AGLFRMADIDGGLIGGASLEANTFLAICHAAEDPRE"
BASE COUNT          660 a          835 c          701 g          603 t
ORIGIN      
        1 agggataata gatgatacac caccgcaaac cggggcctat tgacctcgcg ctcttcgtag
       61 gcccgaggat caacgccgcg gctgaatccc aagcggctag catcctcggt ttgccagtcg
      121 gcctggccat aggtggaata atcgacccca cagagatcga ccagttgctc gaaggcaaac
      181 tcgggggcct ccttgaggat cttacagacc ggtaaaagat tttgcgctgg taactcgacg
      241 gtgatctggc ctaccttcgt aggaccgtgg accagtttcc cgccaaacct tcggttcagg
      301 cgcgcagcaa gctcttccac cgcgaggatc ataagggatt acggagacct ctttaaatta
      361 attaacgggc aatggtattc gtgcgcttga tcttgttctg gagctgcagg acaccataga
      421 gcagggcttc tgctgtcgga ggacagcctg gcacatagat gtctaccggg acgatccggt
      481 cgcagccgcg caccactgaa taggaataat ggtaataacc ccccccattg gcgcaggagc
      541 ccatggatat cacccagcgg ggctcagcca tctgatcata caccttacgc agagcagggg
      601 ccatcttgtt cactaaggta ccggcgacga tcatgacatc ggactggcgc gggctcggcc
      661 ggaacatgac gccgaagcgg tccagatcgt aacgtgcagc ccccgcatgc atcatttcca
      721 ccgcgcagca ggcaagccca aaggtcatgg gccacaacga gccggtgcgg gcccaattga
      781 ctacattgtc tatggtagta gtcactacac ctttttccag gacaccttct attcccattc
      841 cagcgccccc ttcttccatt catagatgaa gccgacaacc agcacggcga ggaagatcat
      901 catagcccaa aaaccgagcc caccgatctc tttaagggcc acagcccagg ggaacaggaa
      961 ggcaatctca agatcgaaga tgataaacag tatggcgacg agatagtaac gcacatcgaa
     1021 tttcatgcgc gcatcttcaa aggcctcgaa accgcattca tagggagaaa gtttctcgtc
     1081 atcggggcga tgcggtccaa agatataacc cgccatcagc accgctatcc caagcagcac
     1141 ggccacgacg aggaagataa agataggtag ataatgttct agcatcaata agcgaacgta
     1201 atagaataaa gcggtttatt ataacctaaa tggtgccgat ggtgagactc gaactcacac
     1261 ggctcgcgcc accgccccct caagacggcg tgtctaccaa ttccaccaca tcggcaacga
     1321 gctttatcat aacggattat tgcggcgctg ctggtttggc aggcgcttct gaattctttg
     1381 tctcaggcga cacgggcggg cttggcctgg tttctgcctc ttctaccttc ttctttttcg
     1441 ctgtatcgtg ttccgcctta tcttcagtcg caccggcccc cgcttgagtg ggcgcaggcg
     1501 gcacatccgc tgcctcggat tcaggcctag ggacagcggg taggtcactc gtttgatctt
     1561 ggggttctac cttcttcacc tgtatatcct gcacctctac cccccctgcg ctcttctcat
     1621 ccttgggggt aacctgtatc cgctccatta aactcttctg ctgggcagtg gaagccaggt
     1681 agccaaggaa aaagcaattt gagaagaaca agaatgccag gatggcggtc gccctgctca
     1741 aaaacgaggc cgatcctcgc gcaccgaata tcgtcgagga tgcgccactg ccgaacgccg
     1801 ccccgacatc agcacctttg ccgtgctgaa gtaagatcag accgatcagt gtaagcgcaa
     1861 tcagtatatg taggcctaga aaccacggtt gcatagctac tctctcgggt cctcggcggc
     1921 atgacagata gccaaaaatg tattggcctc taatgacgca ccgccaatca accctccgtc
     1981 aatgtctgcc atcctaaata agcctgctgc attcgcaaca tttacactgc caccgtacaa
     2041 gatccggaga tttttggcaa cgccatgtgc ctttgcggcg atcagcgctc gtataaaggc
     2101 atggatctct tgagcttgct cagagctggc tgtcctgcct gtcccaatgg cccatacagg
     2161 ctcataagcc accaccgccc cgttgaaggc gcgaaccccg gcacgttcaa ggacagtctg
     2221 cacttgccgg ctcaccaccg cctctgtctg tcccgcctcc cgctcttcta ataattcacc
     2281 gacgcagagg atgggtgtaa gccccacttt cagtgcctga gcaaacttct cggcgataag
     2341 ggcgtcggtt tccccaaaca gccgccgccg ctcggagtgt ccaacgattg catactcaca
     2401 attataatcc ttcagcatga ggccggatac ctctcccgtg aaggcgccct tgtcttgagg
     2461 tgacagattt tgtgcgccga gcttgatcgg cgtgcctttg aggtgttccg acaccaacgc
     2521 cagatacacg aacggcggac agacagccac ctctgcctta attcccgagc ctatcccccg
     2581 ctttatgccc tcaatgagcg atctcacctc agtgaggctc ccattcatct tccaattgcc
     2641 ggcgacaagt ggctggcgga tctgtttcat cccgtatcct acttaaatag ctggtgagat
     2701 taccgggtaa tagccaagaa atcaatgtcg tgctcggtgg gaggttgctg aagatagata
     2761 aacagatgcc agacagcgtg ccgcaagacc acacccgct
//
LOCUS       DASQSL010001168         1787 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_89173, whole genome shotgun sequence.
ACCESSION   DASQSL010001168 DASQSL010000000
VERSION     DASQSL010001168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1787
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89173"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..651)
                     /locus_tag="VE844_12055"
     CDS             complement(<1..651)
                     /locus_tag="VE844_12055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013219708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HZC02056.1"
                     /translation="MTLAVSKAQRIYPSASFDVEKRRRDFPILEQRVHGKPLVYFDNA
                     ATTQKPLKVIESLSRYYRELNANIHRGVHTLSQKATEEYEAARRRIQRFIHAQDSREI
                     IFVRGTTEAINLVAQSYGRARFKPGDEILISAMEHHSNIVPWQLLAQQTGAVLKVIPI
                     NDAGELILEAYERLLGPRTRLVSVVHISNALGTLNPVRAIIERAHALGVPVLIDGAQ"
     gene            complement(648..>1787)
                     /gene="sufD"
                     /locus_tag="VE844_12060"
     CDS             complement(648..>1787)
                     /gene="sufD"
                     /locus_tag="VE844_12060"
                     /inference="COORDINATES: protein motif:HMM:TIGR01981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HZC02057.1"
                     /translation="IAGPSSRVLKDAALARLQFQGLSCHELVFVNGYYADSWSTLGRL
                     PAGVQVQHLVAMLQEKPEALSDHIHRYIEHPSSAFAALNAAFMTDGVYIRLPDQAVIE
                     DPIHLLFISTGENEALASYPRIFVAAGADTRLQLVESYCSVGETQHLTNTLTEIVAEE
                     RACIEHYKIQQESIRNYHIGNMYITQGQQSRVMSHSIALGAALARNDIAVKLDAEGAA
                     ITLNGLYKVGGRQHVDHHTCIDHLKPYTQSEEFYKGVLEGHARAVFNGKVVVHAGAQK
                     TEAKQTNQNLLLSQDAEIDTKPELQIYADDVKCSHGATVGQLDENAMFYLRTRGIDKG
                     TARSLLTYAFADAVLSRISLAPIRTRLERILIGQLPESERIKEFI"
BASE COUNT          351 a          486 c          541 g          409 t
ORIGIN      
        1 ttgagcgcca tcgatgagca ccggtacacc cagggcatgt gcccgctcga tgatcgcccg
       61 gaccgggttg agggtgccga gcgcgttgga gatatggacc acggaaacca ggcgtgtgcg
      121 cgggccgagc agcctctcat acgcctccag gatcaattcg ccggcgtcgt tgatggggat
      181 gaccttgagc acagcaccgg tttgctgagc gagcagttgc cagggaacga tattggagtg
      241 atgttccatt gcagagatga ggatctcgtc cccaggctta aatctggccc ggccatagct
      301 ttgcgccacg agattgatgg cctcggtggt gccgcgcacg aagatgatct cgcggctgtc
      361 ttgggcatgg ataaaccgct ggatcctgcg gcgggccgct tcgtattcct cggtggcttt
      421 ctggctcagg gtatgcacgc cgcggtggat attggcattg agctcgcggt aataacgaga
      481 cagactctcg atgaccttga gcggtttttg ggtcgtggct gcattgtcaa aatacaccag
      541 tggcttgcca tgcacccgct gttcgaggat cgggaaatcg cggcggcgct tttccacgtc
      601 gaatgatgcg gacggataga tccgctgagc tttggaaacg gctagggtca tataaactct
      661 ttgatccgct ctgattccgg taattgtccg ataaggatgc gctcaagtcg ggtacggatc
      721 ggggccaggc tgatccgaga gagcacagcg tcggcaaaag cataggtcag gagactgcgc
      781 gccgtccctt tatcgatgcc gcgcgtgcgc agataaaaca ttgcgttttc gtccaactga
      841 ccgaccgtcg cgccatggct gcatttgacg tcatcggcat agatctgcaa ttcgggtttg
      901 gtgtcgatct cggcgtcttg ggacaagagc aggttctgat tggtctgctt cgcctcggtc
      961 ttctgggccc ccgcgtgaac cacaaccttg ccgttgaata cggcgcgcgc atgaccctcc
     1021 aacaccccct tgtagaattc ttcgctttgg gtatagggtt ttagatggtc gatgcacgta
     1081 tggtgatcca catgctggcg gccccctacc ttataaagac cgttcagggt aatcgctgcg
     1141 ccttcggcgt cgagcttcac cgcgatatcg tttcgtgcca aggccgcgcc taatgcgatg
     1201 gaatgcgaca tcacccggct ctgttgccct tgcgttatgt acatattgcc gatgtgataa
     1261 ttccttatgc tttcctgctg gatcttgtaa tgctcaatgc aagcccgctc ctctgctacg
     1321 atctcggtca gggtattggt cagatgttgc gtttccccga cgctgcaata gctttcgaca
     1381 agctgcaagc gcgtatcggc accggcggca acgaagatcc tgggatagct tgccagggct
     1441 tcgttctctc cggtagagat aaacagaaga tggatcggat cctcaattac ggcctgatcg
     1501 ggcaggcgga tatagacgcc gtcggtcata aaggcggcat tgagggcagc gaatgcgctt
     1561 gaggggtgct cgatgtagcg gtggatatga tcgctcaagg cctcgggttt ctcctgcagc
     1621 atcgccacca gatgttgcac ctgcacaccc gccggtaacc ggccgagcgt ggaccagcta
     1681 tccgcataat agccattgac gaataccagt tcatggcagg agaggccctg gaattgaagc
     1741 ctggcgagcg cggcgtcctt aagcacccgg gacgagggcc cggcgat
//
LOCUS       DASQSL010001169         1593 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_23328, whole genome shotgun sequence.
ACCESSION   DASQSL010001169 DASQSL010000000
VERSION     DASQSL010001169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23328"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..523)
                     /locus_tag="VE844_12065"
     CDS             complement(<1..523)
                     /locus_tag="VE844_12065"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HZC02058.1"
                     /translation="MAADRSVCRYPGVQGGFTLLELLIALTLLGLITVMLYGGLHLAI
                     RGAAIGERRAEASEQVRLIQSFIRREISQVYPLVWSSKGKPRVAFKGRSEALHFAAIL
                     PAHRGEGGLYLVSIEAVHNQQDYQLIFSYRLARPEIQDFETAPQERVVLVDDIERLEF
                     LYYGRQEEEDEARW"
     gene            complement(529..969)
                     /locus_tag="VE844_12070"
     CDS             complement(529..969)
                     /locus_tag="VE844_12070"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HZC02059.1"
                     /translation="MWLSTTVKPTKRLPPPSHCRGLSLLEVLVAFSILALTLGVLLRI
                     FGSGLRGAALAGAYSQAVLQAETLLSRSGIETSLEVGEQNGTLDNRHHWRRIIRPYRL
                     PVTEQETELPLIPYEVIVEVFWQEAGKRRSVTLTSLRLARREQR"
     gene            complement(947..1387)
                     /locus_tag="VE844_12075"
     CDS             complement(947..1387)
                     /locus_tag="VE844_12075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019570496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspH/FimT family pseudopilin"
                     /protein_id="HZC02060.1"
                     /translation="MRERGFTLLEMMIVLVLAGLMLTLVPPLFSGRTSTAELKATARE
                     LAAALRFARGQAITRQRETVLTLDTERRRYSVSGRERSRRLPKGIGLKLDTARSERIA
                     THRASIRFFPDGSATGGQITLSGGKQSYIVDINWLTGRVAIYNG"
     gene            complement(1384..>1593)
                     /locus_tag="VE844_12080"
     CDS             complement(1384..>1593)
                     /locus_tag="VE844_12080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011331086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspG"
                     /protein_id="HZC02061.1"
                     /translation="GLEALVQKPADASRWNGPYLKKKQVPKDPWGQDYHYRSPGEHGE
                     IDLYSLGADNAEGGNGENKDIVSWE"
BASE COUNT          335 a          491 c          442 g          325 t
ORIGIN      
        1 gccagcgcgc ttcgtcctct tcttcttgcc taccataata taaaaattcc agcctttcta
       61 tgtcatctac caggaccacc cgctcctggg gagctgtctc gaaatcctgg atctcgggcc
      121 gagccaggcg gtaagagaag atcagctggt aatcctgttg attatgaaca gcctctatcg
      181 acaccagata aagcccacct tctcctcggt gagcaggcag gatcgcagca aaatggagtg
      241 cctcggatct ccccttgaag gccacgcgtg gtttgccttt gctgctccag actaaagggt
      301 agacttggct gatttcacgg cgtatgaagc tctgaatcaa acggacctgc tctgaggcct
      361 ctgcacgccg ctcaccgatc gctgcacccc ggatcgcgag gtgcaacccc ccatataaca
      421 taaccgtaat aagcccgagc agggttaaag cgatcagcag ctcgagcagc gtgaatcccc
      481 cctgcacgcc cggataacga cagacagacc tatcagctgc catgatgatc acctttgttc
      541 tcggcgtgcc aagcgcaggc tggtcaaggt cacagaacgc cgcttgccgg cctcttgcca
      601 gaagacctcg acgatgacct catacggtat cagcggcagt tccgtctcct gctctgtcac
      661 cgggaggcga taaggccgga tgatccggcg ccaatggtgg cggttatcga gcgtgccatt
      721 ctgttctcct acctcaaggg aggtttcgat gccgctgcgg gagagcaagg tttcggcctg
      781 cagcaccgcc tgggaataag ccccagcaag ggcggcgccc cgtaggccgc tgccgaatat
      841 ccgcagcaat acacccagcg taagcgccag gatggaaaag gcgaccaata cctcgagcag
      901 cgagagaccg cgacagtggg agggaggggg aagacgctta gtcggcttaa ccgttgtaga
      961 tagccacacg cccggttaac cagttaatat ccacaatata gctttgcttt cctcccgaga
     1021 gggtgatctg cccacccgtg gcgctgccgt cggggaaaaa acggatcgag gcccgatggg
     1081 tggcgatccg ctcggagcgt gcggtatcga gcttaaggcc gatacccttt ggcaggcggc
     1141 gcgatcgctc tcggccgctc acgctataac gccggcgctc ggtatcgagc gttaagacgg
     1201 tctcccgctg gcgggtaatc gcctgaccac gcgcaaaccg cagtgccgcg gccagctccc
     1261 gggcggttgc cttaagctct gcggttgagg ttcgcccgga aaacaggggg ggtaccagtg
     1321 taagcatcaa gcctgccagc actagcacga tcatcatctc aagcagggtg aagccgcgct
     1381 ccctcattcc cagctcacga tatccttatt ttccccattc cctccctcgg cattatccgc
     1441 tcccagggaa tagagatcga tttccccatg ctctcccgga gaacggtaat ggtaatcctg
     1501 gccccaagga tccttgggca cttgtttttt cttaaggtaa gggccgttcc agcggcttgc
     1561 gtctgccggt ttttgtacca gcgcctcgag tcc
//
LOCUS       DASQSL010001170         2852 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_33590, whole genome shotgun sequence.
ACCESSION   DASQSL010001170 DASQSL010000000
VERSION     DASQSL010001170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2852
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33590"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(271..435)
                     /locus_tag="VE844_12085"
     CDS             complement(271..435)
                     /locus_tag="VE844_12085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02062.1"
                     /translation="MTRKCHVRFGGGPGEKEPCYLAGGLPYDDVERLKRGLLQEVRAH
                     PNVLIEARAG"
     gene            complement(432..2234)
                     /locus_tag="VE844_12090"
                     /pseudo
     CDS             complement(432..2234)
                     /locus_tag="VE844_12090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009489095.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
BASE COUNT          493 a          805 c          819 g          735 t
ORIGIN      
        1 ctttctcccc gtttcgttgg cgatgcttgt ctggtggctg tttcagaaaa gaaaagggtg
       61 atcttatggg gatctgctgg gggtccaggg gcgctggagg acccctagac ggtctcggca
      121 caaaacggtg gtgagcaaat atgcaagaga attacccatt ccctttcacc ggaaacagtg
      181 agtagcggac gtgtagacat aaaaaaaccc ctccgcatca ccagaaatgc ggaggggtct
      241 gttgtaggga ctggcccgta gcaatgacga tcagcccgcg cgtgcctcga tgagcacgtt
      301 ggggtgcgcg cgcacttcct gcaataaccc tcgctttaac ctctctacat cgtcgtaggg
      361 taggccgccg gcgaggtagc atggctcctt ttcccccggc ccccctccga accggacgtg
      421 acactttcgc gtcatccggc tctccggtaa cttcttttct tcgacttcgg gcggttgtat
      481 tggatgtcca tgtggcacgg ctggcagacg gcaagcgtct tgcgttgtcg cgcgatcatg
      541 atttgcatcc agagcggctt ttcccgctga ccctttttcg tcagatcaga tagtcgtcgg
      601 atatggtgaa tctcgacgtt tcccgtggct ccgcacattt cgcaggtgtc tcggagtcat
      661 cgctcgatca accccgagcg cgaatgcaca aagggcatgg atacctgatc ttgaatggtg
      721 gcgttgggcc gtcgtttgag ggagagtcct ccgaacaccg cgacgagagg tttctttccc
      781 tctcgcggca cgatgacttt gagacagtgg cgtgggccgg aaggcgtctg ccatgtgctg
      841 cgtagacgcc cggcggtctt cttaaccgtg gtgcggaact tgttggccag tgtcttcagg
      901 agcgatgttt ccatcgtcca atgaaggtac gacaggctgc ttaagttctg tgccagggcg
      961 tagtattcca ccagaccccg gtattcccac tgatagtggt acacgatgtc atgttcgtgt
     1021 tcccgtgtca gttcggctcg gtgtatggcc ttgccgtttc gaaggaaccg ttgccgcttg
     1081 ttctccacaa gcccttgggg tatgtacagc ccgacttcgc cgttcagcga tcgctgtctc
     1141 cggctgtcgt acttcgtctg actggccata atcccaattt catcgccgag gaaccgtgct
     1201 cgccccgttt gtgcatgggt aatgagcgtc ttttccgccg agagggtcag cttcaaatcc
     1261 tgttgcagga atgtcgctaa cttctcgcgg atttcctccg cttccgcctt gggtcctgcg
     1321 aggcccagca gaaagtcatc ggcgtatcgc acgtatcgca gtcgccggta gcctgggtca
     1381 cttgggtcct gggatgggta ggcttgtgcc tgccgtcgca ggtcttccgc tttttcatag
     1441 cgtcccgttt cccggtagta cttactcagc gacttgattc gtatgtattc ccgatggtct
     1501 tttcgtctag tgccccgtgt gtatgctgga agcagtcttt ccgttacgaa cctgtccaac
     1561 cggtcgaggt agatgttgga gaggagaggg ctcactaccc caccttgcgg cgtgccgccc
     1621 agggatgggt ggtaccgcca ttcctcacaa tacccggctt tgagcagtcc ctcgatgagc
     1681 cgcaagaagc ggttatcgtg gatcttctct cgcaggatgt ttatcaagat ggtgtggtcg
     1741 atatgatcga aacacccctt gatgtctccc tcaataaacc acttggttcc cagccagttc
     1801 ttgtggatct gggtgagcgc cgtgtggcat ccccgtttcg gtcgaaagcc gtgtgagtgg
     1861 tcggaaaact gtgggtcgta atacgcttca aggatcatgc gtatgacttc ctgcaacagt
     1921 ttatcggacc atgttgggat gcccaacggg cgtgttttcc cattgctctt gggtctttct
     1981 acccgtcgca cgggggtcca ctgccaccgt tcaaagcgga ttgccccgat aatcttggca
     2041 atcttacctt gtgacattcc atccacggtt tcgtccgtag tacctggagt catggcccca
     2101 tcattcttag aaatgcgggc ataggctcgc aggtacaggt ccgggttgta cagttgacgg
     2161 tacacgtctt ccagtggaag gccgcgtgtg cctcggtctt gaatgatgtt caggatggtt
     2221 tcggctgttc gcatctcgcg tacctaggta tcctgtatca tcgagttacc tgtccccctt
     2281 cgccatgtgg acggctttcc cgtcctcaga ctactatggg aactccgttg ccttaggact
     2341 cgcgtcccgt aggcaatccc acgctttgct agtgccatac gtcgtagcat gatgtaggtg
     2401 gcccgttcgt tccgttctga aggctcattg cctcctgtcc ggccctcgga ggtgcgtaca
     2461 ctcccacttg aggagtttcg tgacatccac tatgtcactc gcaagggtca gcgtcgtcat
     2521 taggcgctct ggcgacgggt ctaccgggga ccaactggga actgggcttc aaccaattca
     2581 ggtttcaccg tgtcatgcag gacttgcgga tctgcgattt cagcgccttc tcttcgcctt
     2641 ccgcttttcc gccatgctat ggtccccgtt gtctttcgac gctaggtaag gcggctgtcc
     2701 tatgggagtt tcctccgatt cccatcccgg cttggccggg gatacggctc tagttgtcgt
     2761 ggcgcacacg cgggtggtgg ggaccgggga aggacaccca caggcagaac ggccgggtcc
     2821 ggtcgcgccg cccgagatag tggcaggtgc gg
//
LOCUS       DASQSL010001171         2154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_48640, whole genome shotgun sequence.
ACCESSION   DASQSL010001171 DASQSL010000000
VERSION     DASQSL010001171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2154
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48640"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(101..1360)
                     /locus_tag="VE844_12095"
     CDS             complement(101..1360)
                     /locus_tag="VE844_12095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02063.1"
                     /translation="MGKAATLTRQNRTITVDFHDETTYDYLLGDGKAFLECVLAFLLS
                     IGLQLKHKATCRGGWCLTRHSHYIRVRLGGITIWRLQCTTCRAVFTVLPHFVLRYRQM
                     RPEVARNALLATHGGLSLELCAVICHISPMALYRLVCALGHHSVVTVLARCGLPLPVY
                     FLADEKHSRCLTDKVYLPTIVSGRVIWHLGYTEDASAAALTQSYQEFQRAASQQAPSY
                     RVRGVLTDGFDSTTKSLRTLFPGARLGNCLRHAITKLPGKLTAIASPVRKGLRAQFHT
                     LWYRARQRKGLRVFALGQRLRRFAEHVATTAGAANGERVRHWFQDKKAGWYAVFEDPQ
                     MPVTSTLLDQAHNAIDRKLFAMKGFHHPDGNQQAFLTGLAHLYNLVPYQCRAQHAGQC
                     GVEVEGGRLPTRDWWLNLQILTSGGFR"
     gene            complement(1703..>2154)
                     /locus_tag="VE844_12100"
     CDS             complement(1703..>2154)
                     /locus_tag="VE844_12100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02064.1"
                     /translation="TYCYVQFNPLVTASIEALNYRQFDYETLMSYNHQLSRWLHKRLY
                     HNYTNAGMLNRYNILLSTVKRDSGLLNNVRISQDIRYLERALEELSEKNVIYDFDKEE
                     RRGKKNRINDVLYTLMPAMDFISEMKKANKRSSDIQTTSPLRSPGNM"
BASE COUNT          479 a          559 c          625 g          491 t
ORIGIN      
        1 gacactgttg gggtatatcc ccggaattgt gcatgcggtg tgggtgattg cgaagaaata
       61 agcacattcc atcggattta gtggtaaggg gtgccaccgc tcatcgaaac cctccggagg
      121 tgaggatttg cagattgagc caccagtctc ttgtcggtaa tcgcccgcct tcgacttcca
      181 ccccacactg cccagcatgc tgggcccgac actgataggg cacgaggttg tacaagtgcg
      241 ccagccctgt gagaaacgcc tgttggttcc cgtctggatg gtgaaaccct ttcatggcaa
      301 acaacttccg gtcgatggcg ttatgcgctt gatccagcag ggtgctcgtc accggcatct
      361 gcgggtcttc gaacacggca taccagcccg cctttttgtc ctggaaccaa tgtcgcacac
      421 gctcgccatt ggccgctcca gccgtggtgg cgacgtgctc cgcaaagcga cgcaaccgtt
      481 ggcccagcgc aaacacccgc aagcccttcc gctgtcgcgc ccggtaccac agggtgtgga
      541 actgcgcgcg taagcccttg cggaccggag aggcgatcgc cgtcagtttc ccggggagct
      601 tggtgatcgc gtggcggagg cagttgccca ggcgcgctcc tgggaacagc gtgcgcagac
      661 tcttggtggt gctgtcgaag ccatcagtta ggaccccccg gacccgatac gatggcgcct
      721 gctgggacgc ggcgcgttgg aactcctgat aggactgggt caaggcggcc gcactggcgt
      781 cctcggtgta gccaaggtgc cagatgacac ggccgctgac aatcgtgggc agatagacct
      841 tgtcggtgag acagcggctg tgcttttcat ccgccaggaa atagaccggc agcggcagcc
      901 cacaccgggc gagcaccgtc accacactgt gatggccgag cgcacagacc aagcgataaa
      961 gtgccatggg cgagatatgg cagatgaccg cgcagagttc caaactcagt ccgccatgcg
     1021 tcgccagcaa ggcgttgcgg gccacctccg ggcgcatctg gcgatagcgc aagacgaagt
     1081 gcgggaggac cgtgaacacc gcgcgacacg tggtgcactg gagacgccag atggtgatcc
     1141 cacccagacg gacccggatg taatgcgagt ggcgcgtcag gcaccagcct ccgcgacagg
     1201 tcgctttgtg tttcagctgc aagccgatgg ataagaggaa ggccagcaca cattcgagaa
     1261 acgccttgcc atcgcccagc agataatcgt aggtcgtttc atcgtggaaa tcgacggtaa
     1321 tggtgcggtt ttgccgcgtc agggtggctg ctttgcccat gtgtcacccc caagttatta
     1381 ggtctcgtca gctgatgaga cacaatggga gtaacacatt gaaatatcaa ggcaatcttg
     1441 aatgactcag gacgttacca ctaaatccga tggaatgtga aaaatctttg tcgtcgtaga
     1501 ggctcgtggg tatgtgggca acccgtaggg ttgtccaagc ggcggtgggt aactcgcaga
     1561 gttatccacg ggcgcggcat atccacagcc taaggctttt cagctttttg agaaataaat
     1621 aaggataaga ggatagggca ggcaattttt gtataaggtg ttgattttaa ttgattattt
     1681 tgattttagt tgcatccagt gactacatat ttccgggtga cctgaggggg gaagtcgttt
     1741 gaatgtcgga tgaccgtttg ttagcctttt tcatctcgct aataaaatcc attgcaggca
     1801 ttagggtata gagaacatcg ttgatccggt tcttcttccc cctcctctcc tctttatcaa
     1861 aatcataaat gacatttttc tcactgagct cttcaagggc ccgttccaga tatctaatat
     1921 cttggctaat gcgcacatta ttaagcaagc cgctgtcgcg ctttacggtg ctgaggagaa
     1981 tattgtagcg gttaagcatt ccggcgtttg tatagttgtg atacaggcgt ttgtgaagcc
     2041 atcttgaaag ctgatggttg taggacatca gggtttcata atcgaactgc ctgtaattca
     2101 aggcttcaat ggaagccgtt actagaggat tgaactgcac atagcaatag gtgt
//
LOCUS       DASQSL010001172         1267 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_9863, whole genome shotgun sequence.
ACCESSION   DASQSL010001172 DASQSL010000000
VERSION     DASQSL010001172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1267
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9863"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..267
                     /locus_tag="VE844_12105"
     CDS             <1..267
                     /locus_tag="VE844_12105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="polymerase"
                     /protein_id="HZC02065.1"
                     /translation="LYPTNNPHNEFLLITTQIGLVGLVLLLLLGYRQWRLSYALQPEF
                     IAAAQGLVVTLAVGSLFNSLLLDFTEGHFYACLTGIYYGSFNRK"
     gene            264..1046
                     /locus_tag="VE844_12110"
     CDS             264..1046
                     /locus_tag="VE844_12110"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020483657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HZC02066.1"
                     /translation="MTRLSVILITQDESADVRACLDSVRWADEIVVVDGGSRDDTIAI
                     CREYTDKIYVSEDWPGFGPQKNHALSYATGEWVLSLDADERVSPALRHEIEQAMAAGR
                     FDAYEIPRLSIYCGRTLRHGGWWPDHVLRLFKRGQGSFSNRRVHEKVIVTGPYGQLQE
                     PLIHETFASLEEVIDKINRYSSEGARLLHEQGKRGGLGAAIGHSLWAFIRTYFLKAGL
                     LDGREGLMLAISNAEGTYYRYLKLAYLLKRQADRPQVTPSKP"
BASE COUNT          267 a          350 c          362 g          288 t
ORIGIN      
        1 ctatatccga ccaacaatcc ccacaatgaa ttcctgctca tcaccaccca gatcggtctg
       61 gtaggattgg tcctactgtt gctgctcggc tatcgtcagt ggcgcttaag ctatgcgctg
      121 cagccggagt tcatagcggc cgcccagggg ctggtggtga ccctggcggt gggcagcctc
      181 ttcaattcct tattgctgga cttcaccgag gggcattttt atgcctgtct gaccggtatt
      241 tattacggca gcttcaaccg caaatgaccc gattgagcgt cattcttatc actcaggatg
      301 agagtgccga tgtccgcgcg tgtctcgact cggtgcgctg ggccgacgag atcgtggtgg
      361 tggatggcgg cagccgcgac gatacgatcg ccatctgccg cgagtatacc gacaagattt
      421 atgtcagtga ggattggccc ggattcggcc cgcaaaagaa tcatgccctc agttacgcca
      481 ccggggaatg ggtcctgtca ctggatgcgg acgagcgggt atctcccgca ctccgacacg
      541 agatcgaaca ggccatggcg gcgggccgct ttgacgccta tgagatcccg cgcctgtcta
      601 tctactgcgg ccggacccta cgccatggcg ggtggtggcc ggatcatgtg ctgcgcctgt
      661 ttaagcgggg acagggtagc ttttcaaaca gacgggtgca tgaaaaggtg atcgtgacgg
      721 gaccgtatgg gcagttgcaa gaacccttga tccatgagac ctttgcctcc ctcgaggagg
      781 ttatcgacaa gatcaatcga tactccagcg aaggcgcccg gctgctccat gagcaaggca
      841 agcggggagg gctcggggcg gcgatcggtc atagtctatg ggccttcatc aggacgtatt
      901 tcctaaaagc gggcttgctg gatggccgcg agggtttgat gctggccatc tccaatgccg
      961 aagggactta ttaccgctat ctcaaactgg cctatctcct caaacgccag gccgaccggc
     1021 cacaggtcac gccctccaag ccatagccat ttttcggtac cggttttgca tccttggcac
     1081 ccagagaacg actcccgtcg agcggtaaga tcaaacgatg agcgaccccc ctcccagggt
     1141 tgcttcttca tctgcggctt gcgggataaa ataagaggga aaataattaa agagttacat
     1201 atatctgatt attttcacat atattttatt gacccaatgt gctccgccga ttatagtctg
     1261 cgagggg
//
LOCUS       DASQSL010001173         1740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_89206, whole genome shotgun sequence.
ACCESSION   DASQSL010001173 DASQSL010000000
VERSION     DASQSL010001173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89206"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(93..1379)
                     /locus_tag="VE844_12115"
     CDS             complement(93..1379)
                     /locus_tag="VE844_12115"
                     /inference="COORDINATES: protein motif:HMM:NF013068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02067.1"
                     /translation="MTIAGCEEQIIRIKSASFQPELNEALEAQLRERVKIAVQTTVEG
                     ALEAELAEDLADRIDEKPRRSGFFRRVMDTQYGRIAELRVPKLRWGNKEREWHILQRY
                     QRGLSSFLGFALYLYVLGLSLRDLQEACYFLLGAVISRSAINQITLQVQARLDQQRLA
                     PITETPPILIVDGVWVEIQYTLDEFKEDRAGHQRQVRQAQERVILTALAVWPEGHSPI
                     FHYEVAEGENEACWLAFFDHLIARGLDPTAVRLVVSDGANGLVTAMEHRLPQAQQQRC
                     ITHKVRGMERYLSFQHLPAQDAQGQALEPAQAKEARRAEIFQDAYAIYQAPTVEAAQF
                     NLAAFIEQWRPLEPKAVHAFCWGIERTFTFYQFDARLHIRIRTTNLLERFFREFRAKA
                     DEIGAFPNETSCLTVFALVVERDHAKHNRLSVAKNS"
BASE COUNT          378 a          506 c          485 g          371 t
ORIGIN      
        1 cctcccggca gatctccgtc ccgccagcta tcttcttacg attagcaaca agcaggatcg
       61 cagtaaagcc gattccttca atctggttag tgtcatgagt ttttcgccac tgataggcgg
      121 ttatgtttcg catggtcacg ctcaaccacg agtgcaaaca cggtcaggca actggtctcg
      181 ttgggaaacg cgccgatctc atctgccttt gcgcggaatt cgcggaagaa acgctccaac
      241 agattggtcg tgcgaatgcg gatgtgcaag cgggcgtcga attgatagaa cgtaaaagtt
      301 cgctcaatgc cccaacaaaa ggcgtgcact gccttaggct ccagcgggcg ccattgctca
      361 ataaaggcgg ctaagttgaa ctgggcggcc tcgacggttg gggcctgata aatcgcgtaa
      421 gcatcctgga aaatctcggc gcgccgcgct tctttggctt gcgctggctc tagcgcctgc
      481 ccctgagcat cctgcgcggg gaggtgttgg aagctgagat agcgttccat cccgcgcacc
      541 ttgtgcgtga tgcagcgttg ttgttgggcc tggggtaagc ggtgttccat ggctgtaacc
      601 aaaccattag ccccatcgct gaccaccagg cggacggccg tcgggtcgag gccacgggcg
      661 atcaagtggt caaagaaggc cagccaacag gcctcgttct cgccctcggc gacttcgtag
      721 tggaagatcg gggaatgacc ctcgggccag acggcaagcg cagttaagat gacgcgctct
      781 tgcgcctgcc gcacttggcg ttgatgcccc gcgcgatctt ctttgaattc atcgagcgta
      841 tattgaatct cgacccacac cccatcgacg atcaagatcg ggggggtctc ggtgatcgga
      901 gccaagcgct gttggtcaag gcgggcctgc acttgcaggg tgatctgatt gatcgcgcta
      961 cgcgagatga ccgcccctaa cagaaagtaa caggcttctt gcagatcacg caaggataag
     1021 cccagcacgt aaagatagag agcgaagcct aggaagctac tcaggccacg ctggtagcgc
     1081 tgcaaaatat gccattcgcg ctctttatta ccccagcgca gcttcggcac gcgcagctct
     1141 gcaatccgcc catactgggt atccatcacc cggcggaaaa agcccgaacg ccgtggcttc
     1201 tcatcgatcc gatcggccag gtcctccgcc agttcggcct cgagcgcgcc ttcaaccgtc
     1261 gtttggactg cgattttaac ccgttcccgg agttgggctt cgagggcttc attgagctcg
     1321 ggttgaaagc tcgcactctt gatgcgaatg atttgttctt cacagccagc aattgtcata
     1381 aggcgcctcc agttgccaaa agtccattta tgcttgacct taccgccttg tcaatgtggc
     1441 gaaaaactta tgacactaac agtgtttttt tcggaaataa tacaggggat cgggcctctg
     1501 tcgcacccta ggcgctcctg ctatcccaag gggttcgtgg ccagttcgca cccctcaccg
     1561 aactccgtaa cgcgcgagaa gtgggtacga gggtgcgtac taaagctcat gcaaggtaga
     1621 atgccgcttc tagcccaggt tcagatccgc acgggtgcgc agtccccgta cgcaccccat
     1681 accgaaccct ataacacgcg aaggcggtac gaacccaagc tcgtaccaaa ggagccaagt
//
LOCUS       DASQSL010001174         1479 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_89212, whole genome shotgun sequence.
ACCESSION   DASQSL010001174 DASQSL010000000
VERSION     DASQSL010001174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1479
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89212"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(21..>1479)
                     /gene="sucA"
                     /locus_tag="VE844_12120"
     CDS             complement(21..>1479)
                     /gene="sucA"
                     /locus_tag="VE844_12120"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013219187.1"
                     /note="SucA; E1 component of the oxoglutarate
                     dehydrogenase complex which catalyzes the formation of
                     succinyl-CoA from 2-oxoglutarate; SucA catalyzes the
                     reaction of 2-oxoglutarate with dihydrolipoamide
                     succinyltransferase-lipoate to form dihydrolipoamide
                     succinyltransferase-succinyldihydrolipoate and carbon
                     dioxide; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HZC02068.1"
                     /translation="ADEPSVTQPIMYQRIQQHPGVQKLYADKLVQEGVSAPTEPLEMA
                     RSYVQALERNQAVAGPVVYDIKHEFRIDFSPFIGTHWREPAHTPLSLEKIAALTLRFT
                     TLPGAFKLHRSVARIIEQRREMGRGQLPIDWGYAETLAYASLVDEGYPVRLSGQDSGR
                     GTFAHRHAVLYDQNTGDSYIPLQYIKEDQPSFLIINSLLSEEAVLGFEYGYSSSAPNA
                     LVIWEAQFGDFANNAQVVIDQFLTSSEAKWGRYCGLVLFLPHGYDGQGPEHSSARLER
                     FLQLAAEENIQVSVPSTPAQMFHLLKRQILRRYRKPLVVMTPKSLLRHKLSVSTLSDL
                     THSGFQMVIDEIDPIDPDAVERLLVCSGKVYFDLLEARRARKITDIAIVRIEQIYPFP
                     VEEMDALIARYPNAMEVVWVQEEPRNQGAWVYLLARLHLFGRLRASQQLRVVARPYCA
                     SPAVGYMSKHLEQQQALVDEALRLSQAAARKQKTA"
BASE COUNT          337 a          429 c          400 g          313 t
ORIGIN      
        1 gctgtcctcc tatgaagctg tcaagccgtt ttctgcttgc gtgcggccgc ttgactcagt
       61 ctcaaagcct catctacaag cgcctgttgt tgctccagat gttttgacat atagccaacc
      121 gccggggagg cacagtaggg acgtgctact acgcgtaact gctgggatgc gcgcagcctc
      181 ccaaacagat gcaaacgcgc caaaagatac acccaagcgc cctggttacg gggttcctct
      241 tgaacccaga ccacctccat cgcgttagga tagcgtgcga tcagcgcatc catctcttcc
      301 accgggaagg gatagatctg ctcgatccgc acgatcgcga tatccgtgat cttgcgagcc
      361 cgccgcgcct ccaagagatc aaagtagacc ttgccgctgc agaccagaag ccgctcgacc
      421 gcatccgggt cgatgggatc gatctcatcg atcaccatct gaaaaccgct gtgggtgaga
      481 tccgagagcg tcgagaccga tagcttatgg cgcagcaggc ttttaggcgt catcaccacc
      541 agtggcttgc ggtaacggcg caatatctgg cgcttgagca gatgaaacat ctgtgccggg
      601 gtgcttggca cgctaacctg gatattttcc tccgccgcga gctggagaaa acgctccaaa
      661 cgcgctgacg agtgttcagg cccttggcca tcataaccat gaggcaggaa caggaccaac
      721 ccgcagtaac gaccccattt ggcctcagaa gaggtcaaga attggtcgat caccacctgt
      781 gcgttattgg caaaatcacc gaactgagcc tcccaaatga ccagggcatt cggcgcagaa
      841 ctgctgtaac catactcaaa accaagcaca gcctcctccg acaacagcga attgatgatc
      901 aaaaagctcg gttgatcctc cttgatatat tgtaagggga tatagctatc tccagtgttc
      961 tggtcataga gtaccgcatg ccggtgggcg aatgtccccc gtccactgtc ttggcctgac
     1021 aggcgcaccg gataaccttc atccacgagg ctggcatagg ccaaggtttc ggcatagccc
     1081 cagtctatag gtaattgccc ccggcccatc tcacgccgtt gttcaatgat ccgggccaca
     1141 ctccggtgca acttgaacgc tccaggcagg gtcgtgaatc gcaaggtcaa ggccgcaatc
     1201 ttttcaaggg agagaggggt atgagccggt tcacgccagt gggtgccgat gaaagggctg
     1261 aaatcgatac ggaattcatg cttgatgtca tacactacgg ggccagcgac agcctgattg
     1321 cgctccaggg cctgcacgta ggatcgtgcc atctccagag gctcggtagg ggcgcttacg
     1381 ccttcctgca ccagtttatc ggcatagagt ttctgcaccc cgggatgctg ctgtatgcgt
     1441 tgatacataa tgggttgggt caccgagggt tcatccgct
//
LOCUS       DASQSL010001175         1200 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_33634, whole genome shotgun sequence.
ACCESSION   DASQSL010001175 DASQSL010000000
VERSION     DASQSL010001175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1200
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33634"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..773
                     /locus_tag="VE844_12125"
     CDS             <1..773
                     /locus_tag="VE844_12125"
                     /inference="COORDINATES: protein motif:HMM:NF014816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HZC02069.1"
                     /translation="FSKPGMQGFEQPVDHRVQRWTRAGFRDNPLWPARSLADPRSGCS
                     ASKNGRDFGSGVPYGYAMKLFYNPRSRATIAKWMLDECGAAYEIIPVDLKQREHKAPE
                     FLEVNPSGKLPALVDGNSRIFESAAICLYLGDKLPEANLAPRLDSPERGRYLSLMVYS
                     TSQLEPAMSDALMGVESLPQRGWTDFETAQDVIEGELGDGAYLFGEWFTAADVMIGSM
                     FVWQQLWSGRPSERLKISAYVDRLLRRPAAIKVGGATP"
BASE COUNT          270 a          326 c          340 g          264 t
ORIGIN      
        1 ctttctccaa acctggcatg caaggtttcg agcagccagt agaccaccgg gtgcaaaggt
       61 ggacccgcgc aggtttccga gacaacccct tatggccagc cagaagccta gccgatcctc
      121 ggtcgggatg ttcagcttcg aaaaacggcc gtgatttcgg tagtggcgta ccgtatggtt
      181 atgcaatgaa gctattctac aatcctcgga gccgcgcgac gatcgctaag tggatgctgg
      241 acgagtgcgg tgcagcctac gagatcattc ccgtcgactt gaaacagcgc gagcacaagg
      301 caccggagtt cctcgaggtc aacccgagcg gcaaacttcc agccctcgtt gatggcaact
      361 ccagaatatt cgagtccgca gcgatttgct tgtatctcgg agacaagctc ccagaagcca
      421 acctcgcccc caggctcgat tcaccagaac ggggccgtta tctctcgctg atggtctact
      481 ccacgtcgca gctcgaaccg gccatgagtg atgcgctgat gggggtggag agccttcccc
      541 aacgcggatg gacagatttc gagacggccc aggacgtgat cgaaggcgag ttaggagacg
      601 gagcatactt gttcggtgaa tggttcaccg ccgctgatgt gatgatcggg tctatgttcg
      661 tctggcagca gttgtggagt ggacgcccgt cggaacggtt gaagatatcg gcttatgtgg
      721 atcgtctttt gaggcgacct gcagcgatta aggtgggagg cgccacccca tagccgctga
      781 cctgctaatg ttgctgcccg tgctcccgtt acgagtcatc ttttttcccc actcgcctgc
      841 gccaagccgt tgacgtcatc cttgatgaat tgtcgacatt ctatattctc agtgcggtga
      901 gcatgaatac ccccacaaac cctatcatca ccatccccac ctctatatag cgcatgagga
      961 tggtgatgat gtcaaagaag ggggtgccag gacattaccg gatgatccat ccagtcagca
     1021 ccgtctccac ctccataacc tctgtggtag cggcattcag ctggtgtacg aggcctccaa
     1081 gaccagagaa gtgcaaagga ggttgattgc ggcactctgc tatggagttg atagatgatg
     1141 tgatgggtcg ggagcctagg gaacacaagt gcgactaaga ggacgtttca aaacttgtca
//
LOCUS       DASQSL010001176         1002 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_130618, whole genome shotgun sequence.
ACCESSION   DASQSL010001176 DASQSL010000000
VERSION     DASQSL010001176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130618"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..153
                     /locus_tag="VE844_12130"
     CDS             <1..153
                     /locus_tag="VE844_12130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018357734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase C-terminal domain-containing
                     protein"
                     /protein_id="HZC02070.1"
                     /translation="ILAKENIKKVEVLEYPELGMEAVWKIEVEDFPAFILVDDKGNDF
                     FKQILR"
     gene            complement(174..>1002)
                     /locus_tag="VE844_12135"
     CDS             complement(174..>1002)
                     /locus_tag="VE844_12135"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HZC02071.1"
                     /translation="LEGIDTAVLFGTSPFLSLPFVDDKDLACAVARVYNNWLADYCKA
                     DPRRLKGVALTAIQDPIEAVKELRRAVEELKFVAVATPPISASGKNLDHPDLYPFFAE
                     AQRLGVPICIHVGAGDGVPAGTERFDHPLYTHALAHPFEQMIAALCVVAGGLLEKFPR
                     LKFAFMEAGCGWVPYWMERLDEHYEILQPTVPWLTKPPSEYMRSGQMFYAFEMDEKML
                     PYVAEFVGADRLVFATDYNHSDSKFPHTVEEVMERRDISEGLKAKIMGENAAKLYDL"
BASE COUNT          237 a          275 c          267 g          223 t
ORIGIN      
        1 attctcgcca aagaaaacat caagaaagtc gaagtgctcg aatatccgga gctggggatg
       61 gaagcggttt ggaagatcga agtcgaagat tttccggctt ttattctagt cgacgacaag
      121 ggcaacgact ttttcaaaca aattcttcgt tgagattgga acatttcgcg ggtttacaaa
      181 tcgtagagct tggcggcgtt ttctcccatg atctttgcct tcaagccttc cgagatatcg
      241 cggcgctcca tgacttcttc cacggtgtgc ggaaacttgg aatcgctatg attataatcg
      301 gtggcaaaca ctagccggtc ggcgccaacg aattccgcca cgtagggcag catcttctcg
      361 tccatctcaa aggcatagaa catctggccg ctgcgcatgt attcgctcgg cggtttcgtg
      421 agccaaggca cggttggctg caggatctcg tagtgctcat cgagccgctc catccagtac
      481 ggcacccagc cgcagcccgc ttccataaag gcaaacttca gtctgggaaa tttttcgagc
      541 aacccgccgg cgacgacgca tagcgcggca atcatctgtt cgaatggatg cgccaaagca
      601 tgagtgtaca gcggatggtc gaatcgttcg gtgcccgcag gcacgccgtc tccagcgccg
      661 acgtgaatac agataggcac tccgagtcgc tgcgcctcgg caaagaaggg gtagagatcg
      721 ggatgatcca aattctttcc tgatgctgaa atcggcggtg tcgccaccgc tacgaatttc
      781 agttcctcca cggcccgacg taattctttt accgcttcga tcggatcctg gatcgccgta
      841 agagcgaccc cctttaggcg ccgcggatcg gccttgcaat aatcagccag ccagttgttg
      901 taaacgcgcg ccacggcgca agctagatct ttgtcatcca cgaacggaag gctcaaaaaa
      961 ggagaagtgc cgaacagcac agcggtatcg atgccttcca ga
//
LOCUS       DASQSL010001177         1054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_186905, whole genome shotgun sequence.
ACCESSION   DASQSL010001177 DASQSL010000000
VERSION     DASQSL010001177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186905"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            442..>1054
                     /locus_tag="VE844_12140"
     CDS             442..>1054
                     /locus_tag="VE844_12140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010037040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-galactopyranose mutase"
                     /protein_id="HZC02072.1"
                     /translation="MLSLPLVVFSHLRWDFVYQRPQHLLSRLAQEQAVFVIEEPIRDP
                     DAAPHWERQTPRPQVTVCRPHTPCPESGFGDAQLPDLKVLVERLVREEDLKRCQVWTY
                     TPMALPLIELFEPEVLVYDCMDELSAFDLAPPQLMERERQLLDRADIVFTGGPSLYRA
                     KQGRHPNVHLFPSSVGTEHFRQALSGLPEPQDQAGLPRPRLGYF"
BASE COUNT          203 a          317 c          287 g          247 t
ORIGIN      
        1 atgcgatgtg atccgaggac aaggcgggtg ccgttgccgt cagcgccgcc ggcgcatata
       61 cactgttcat catacacctc caatagcccg ctctggtgag ttggtgcgtg ttgtttcgat
      121 tctatagcga ttcgcctaga ggtccaacac aaaaatgcgt gtcgggagtg atattaactg
      181 gctggcgctg agccatgcgc accttccccg cttcacctaa gccctgtggt gtcaaagacg
      241 caggatcttc gctcaaaatg agaggtgtga cgactagctc tctcagttca agaggtagtc
      301 acccttagtt cttccgcatg aggacttcac cacgatagag tcttcaagcc aataatagct
      361 tcttgcctct aaggcataaa gtttgctctg gtgagtgcaa ttgaacagta acgtacttta
      421 tgagtttcta gaggtcctta gatgctatca cttccgctag tcgttttttc gcacctgcgc
      481 tgggatttcg tctaccagcg tccgcaacac ctgctctcgc gcttagccca ggagcaggcc
      541 gtctttgtca ttgaagagcc tatccgtgat ccggacgcgg caccgcattg ggagcgacag
      601 accccacgcc cgcaggtgac ggtctgccgt ccgcacactc cctgtcctga atctggcttt
      661 ggtgatgccc agctgcctga cctcaaggta ctggtcgagc gcctggtccg ggaggaggat
      721 ttgaagcggt gccaagtctg gacgtacaca ccgatggcgc tgccgctgat tgagttgttc
      781 gagcccgagg tcctcgtcta tgactgtatg gacgaactct ccgccttcga ccttgcgccg
      841 ccccaactga tggagcgcga gcgtcagctc ttggaccggg cggacatcgt cttcaccggc
      901 gggccgagcc tctaccgtgc taagcaaggc cggcacccaa atgttcacct gttcccttct
      961 tctgtaggca ctgagcactt ccggcaagcg ctcagcggcc ttccggagcc gcaggaccaa
     1021 gcaggcctac cccgcccccg gttgggctat ttcg
//
LOCUS       DASQSL010001178         2120 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_196823, whole genome shotgun sequence.
ACCESSION   DASQSL010001178 DASQSL010000000
VERSION     DASQSL010001178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2120
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196823"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..229
                     /locus_tag="VE844_12145"
     CDS             <1..229
                     /locus_tag="VE844_12145"
                     /inference="COORDINATES: protein motif:HMM:NF024765.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alginate export family protein"
                     /protein_id="HZC02073.1"
                     /translation="VEDGIYGPSGNLIRLPEGSRSRYVGSAISLTADWQINRHLNLTT
                     IYAHFFPGSFLRETGSAEPIDFIELTLSFTF"
     gene            401..1909
                     /locus_tag="VE844_12150"
     CDS             401..1909
                     /locus_tag="VE844_12150"
                     /inference="COORDINATES: protein motif:HMM:NF013753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02074.1"
                     /translation="MTGLHRTPLTTSQKIECVAKALAGQEASGGIAGLSREYEVSRPT
                     VYAAKVAASEALREHFAEPESDPTVWVKVDSAQVRRTVVALRVMAPNALRPIEDVLPI
                     VYPGVRISYGKVQRMAAEAEAQAAAFNTKADLAGVRAGALDELFSQGEPVLAGVDLDS
                     GYLFGLALRETRSGEDWAEVLKQGQEQGLNLAVVVKDAAKGIESGVREVFPQAEQRDD
                     CFHALYELNKVRRRLEQRAYSAIAAQEEARHRLPKISISDRKQRRCQRHRIARAHRHC
                     QQAIARFDRFEVAMREVQEALECVDLEEGHLRQADEVKAMIEQAADSLQVLDPVCHKV
                     AGYLRNRAAGLSLATGELNTRLGELATTYTLEAVALACMLWRWVFELHNDRRPWLRAE
                     QHRQLLGAFAHLKHRLGPQLDALLEAVKALLDQRHRASSAIEGFNAALRPFLYVHKGV
                     TQGFLELFRAYYNLRTRRWGRHQGTSAHQCLTGQAVGDWLTLLGFPPSSTLH"
BASE COUNT          428 a          581 c          662 g          449 t
ORIGIN      
        1 cgttgaggat gggatctatg ggccgagtgg caacttgatc cgcttgcctg agggaagccg
       61 ttctcgctac gttggaagtg cgatttcatt gaccgcggat tggcagatta accgtcatct
      121 caacttgacc acgatctacg cacatttctt tcctggtagc tttttgcgcg agacgggatc
      181 agccgagccc attgacttca tcgagctcac gcttagcttc accttctagg gtaagtggga
      241 tttttttaag ggactggtca ttctgcttta cacattgagt caaaggaatc gacggctgga
      301 agttaagtgg tcggtgatga agcgaggttt ggtgggaagc cgtgagtggg tatgggatga
      361 tagggtttac cgaccttcta tcaacctcaa ggagcagccc atgacgggtc tacaccgtac
      421 ccccctaacg acttcccaaa agattgagtg tgtcgcaaaa gcgctcgcag gacaagaagc
      481 atccggtggc atagcggggc tgagccgtga atatgaggtt tctcgcccga cggtgtatgc
      541 ggccaaggta gcggcttcgg aggcgttgcg ggagcacttt gcggagcccg aatccgatcc
      601 cacggtgtgg gtcaaggtag actcagcgca agtgcggcgc acggtcgtgg cgttgcgggt
      661 gatggcgccc aatgccttgc gtccgatcga ggatgtgctc ccgattgtgt atcccggcgt
      721 gcggatatcc tacgggaagg tccagcgtat ggccgcggag gctgaagcgc aggcggcggc
      781 cttcaacacc aaagcggact tagcgggggt gcgtgccggg gcgctcgatg agctgttcag
      841 ccagggggaa ccggtcctag cgggcgtgga tctcgacagc ggatacttgt ttggtttggc
      901 gttgcgcgag acacgcagtg gcgaggactg ggctgaggtg ctcaaacagg gccaggagca
      961 ggggttgaat ctggcggtcg tggtcaagga cgccgcgaag gggatcgaat ccggggtgag
     1021 ggaagttttc ccgcaggccg agcaacgcga tgattgtttc catgcccttt atgagctcaa
     1081 taaagtacgg cgacggcttg agcaacgagc ttacagtgcc attgccgccc aagaagaagc
     1141 ccgccatcgg ttgccgaaaa tctccataag cgaccgtaaa caacggcggt gccaacgcca
     1201 ccgaatcgcg cgcgcccacc gccactgcca acaggccatt gcccggtttg accgctttga
     1261 ggtggccatg cgcgaggtcc aagaagcgct ggagtgtgtt gaccttgagg agggccatct
     1321 tcgccaggcc gacgaggtga aagcgatgat cgagcaggcc gcagacagtt tgcaggtcct
     1381 tgatccggtc tgccacaaag tggcaggcta cctgcgcaat cgggccgctg gattatcgct
     1441 ggccacgggg gagttaaaca ctcggcttgg tgagttggct acgacctaca ctcttgaggc
     1501 ggtggccctg gcgtgcatgc tctggcggtg ggtattcgag ctacacaatg accgccgtcc
     1561 ctggctccgg gccgaacagc atcggcaact cctcggtgcc tttgcacacc tgaagcaccg
     1621 gctgggtccc cagcttgatg cgctcttgga ggcggtcaaa gccctcttgg accagcggca
     1681 ccgggcttca agcgctattg aagggttcaa tgctgccctg cgtccctttc tctatgtgca
     1741 taagggggtg acacagggct tcttggaact ctttcgcgcc tactacaacc tcagaacccg
     1801 gcgctggggg cgtcaccaag gcacttcagc tcaccagtgt ttgaccggtc aagccgtggg
     1861 cgattggctt acgctcctcg gcttcccgcc ctcgagcaca ctgcactaac tccaaaggct
     1921 caacgccttt caaacgggaa acctcatccc gtcctgaaac ccctccgttc agggccgtca
     1981 tcgcacacca gtgtaaagca gaacccccgg attttgaccg gtcccacttg ggttagtgca
     2041 tactggataa aggtgccgaa gtttgattcg ggcatctttg gtagtaaatc gccaagtcag
     2101 ggtgctagca tctgcatttc
//
LOCUS       DASQSL010001179         1083 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_130675, whole genome shotgun sequence.
ACCESSION   DASQSL010001179 DASQSL010000000
VERSION     DASQSL010001179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130675"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(225..395)
                     /locus_tag="VE844_12155"
     CDS             complement(225..395)
                     /locus_tag="VE844_12155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02075.1"
                     /translation="MHKLQIREKLAREKLKDPLFLRYLSRMFRVAGVLKGRGIDREGA
                     RSQSYRAAWALT"
     gene            479..>1083
                     /locus_tag="VE844_12160"
     CDS             479..>1083
                     /locus_tag="VE844_12160"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HZC02076.1"
                     /translation="MQTIILAARKGGPGKTTLAAHLAIQAERDGAGPVMLVDLDPQQT
                     LTAWWKDRQAETPILSEVPITRFRDELASVRDKPGLIIVDTPGFEADLLTLITAADFV
                     VIPVQPSPNDLRGIATTVDLAKRAQRPFCFVITRGIPRSGLTQQAPLILSQYGAVATT
                     IVFNRVDYAGAMTDGRTVQEIDPKGKAAAEIAQLWAYLNQQ"
BASE COUNT          249 a          327 c          259 g          248 t
ORIGIN      
        1 acaaccttaa aaaccatcct aagccattga tagtcatact cccagtcata tgagtgtttc
       61 ggtactgagg atagctgcgc tcaagggtta cattcacctg ctttcatagg cccttgactg
      121 aagccaaatt tagtgaacgc cgcgtagcag catcgatcag tgggttcatt ttgcgaatcc
      181 ttgccatcgc cctattacgc atgaccaccc tcccctcccc tgctctacgt taaagcccat
      241 gccgcgcgat acgactgaga ccgagcgccc tcacggtcaa ttccccttcc tttgagcacc
      301 ccagccaccc tgaacatccg actgaggtaa cgcagaaata gtgggtcttt gagcttctcg
      361 cgtgccagtt tctcgcggat ctgcagcttg tgcacactcc tgcccgatgt gtaactctag
      421 acttttagag ttgtaaaatg ttactgtagt agaaatctag aaaggtagac gcgaagaaat
      481 gcagacaatc atacttgcag cgcgcaaggg aggcccaggc aaaacgactc ttgcggccca
      541 ccttgcaatt caggcagagc gcgacggcgc cgggcctgtg atgcttgttg acctcgatcc
      601 acagcagacc ctcaccgcct ggtggaaaga ccgccaagca gagacgccga ttctttccga
      661 agttcctata acccgcttcc gtgacgaatt ggcttccgtg cgcgataagc ccggcctcat
      721 tatcgtggac acgcccggct ttgaggcaga cttactgaca ctcattactg ccgctgattt
      781 cgttgttatc ccggtgcagc cgtctcctaa tgatctgcgc ggtattgcaa cgaccgttga
      841 tctcgccaaa cgcgctcagc gaccgttctg ctttgtgatt acacgtggca tacctcgatc
      901 tggcctcaca cagcaagccc cgcttatcct gtcgcagtac ggagcggtcg ccacgacgat
      961 tgtctttaac cgcgttgatt atgccggtgc gatgacagac ggccgcacgg ttcaggaaat
     1021 cgatccgaaa ggcaaagccg ccgccgaaat cgcccaacta tgggcctacc tgaatcaaca
     1081 gat
//
LOCUS       DASQSL010001180         1051 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_130682, whole genome shotgun sequence.
ACCESSION   DASQSL010001180 DASQSL010000000
VERSION     DASQSL010001180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130682"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1051
                     /locus_tag="VE844_12165"
     rRNA            <1..>1051
                     /locus_tag="VE844_12165"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          259 a          259 c          354 g          179 t
ORIGIN      
        1 tggatgcctt ggcatcgaga ggcgatgaag gtcgtgataa gctgcgataa gcctggggga
       61 gctgcacatg agctgtgatc ccaggatgac cgaatgggga aacccggccg gccgcgaggt
      121 cggtcaccgc gcaagcggag ccaacccggg gaactgaaac atctcagtac ctggaggaac
      181 agaaatcaac cgagattctc ctagtagcgg tgagcgaacg gggaacaggc caaaccgtgg
      241 gagcttgctc ccgcggggtt gtgggaccac aacgtgggat gcacgacgct aaagtgaagc
      301 ggcccggaat ggcccgccag agacggtgaa agcccggtaa ctagacgcgt acggccccta
      361 gtggtatccc gagtagcgcg gaccacgtgg aattctgcgc gaagccgggg ggaccaccct
      421 ccaagcctaa atactcctcg atgaccgata gtgcacgagt accgtgaggg aaaggtgaaa
      481 agaacgccgg gaggcgagtg aaatagaacc tgaaaccgtg tgctgacaag cggtcggagg
      541 gcacgtaagt gcctgacggc gtgccttttg cattatgatc cggcgagtta ctgatcacgt
      601 gcaggttaag gccttcaggg ccggagccag agcgaaagcg agtctgataa gggcgatttc
      661 gtacgtggtc gtagacccga agccgtggcg atctaccctt gagcaggttg aagccgccgt
      721 aacaggcggt ggaggaccga accgttgtgg gttgaaaacc gctcggatga cttgagggta
      781 ggggtgaaag gccaatcaag ctcggagata gctggttctc cccgaaatat attttggtat
      841 agcctcggga aatgagttca caggaggtag agcactggat gggtccgggt cgtgaataac
      901 gatacctccc ccaaccaaac tccgaatgcc tgttgaatgc tgcccgggag gcagtcgcgg
      961 tgcgctaatg taccgtggcg agagggaaag aacccagagc ctcagctaag gccccggagt
     1021 ggcggctcag tgtagcaaag gatgtgatct t
//
LOCUS       DASQSL010001181         1423 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_159072, whole genome shotgun sequence.
ACCESSION   DASQSL010001181 DASQSL010000000
VERSION     DASQSL010001181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1423
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159072"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..439
                     /locus_tag="VE844_12170"
     CDS             <1..439
                     /locus_tag="VE844_12170"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HZC02077.1"
                     /translation="LVQTESEIAAILAHEMGHQLASHLCQAPPTLWESFWSLMGDWST
                     PESGREVHKQGVGSLTQVIDMAKELEADRLAVQILDLAGYDPRAVLTVARRLPAGDGF
                     HRLRDQRRIRALEDLLVGYPSRSEKGSKGSKELQRVKRELASQ"
     gene            653..>1423
                     /locus_tag="VE844_12175"
     CDS             653..>1423
                     /locus_tag="VE844_12175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004175404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HZC02078.1"
                     /translation="MAMDILTELYRILPPQAVITDNESKRPYECDGLSAYRQLPGEVV
                     LPDTVEQVQAILKLCHRYKTPVVPRGAGTGLSGGALPLAQGVLLSLTKFNRILALDPI
                     NRTATVEPGVRNLAISEAVAGYGLYYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTV
                     HNILGLKVLTLAGDLLELGGQCLDSPGYDLLALITGSEGLLGVVVEVTVKLLPKPPYA
                     QVLLAAFDRIESAGAACAAIIACGILPAGLELMDRAATC"
BASE COUNT          301 a          380 c          425 g          317 t
ORIGIN      
        1 cctggttcag actgaatccg aaatcgccgc gatcctggct catgaaatgg gccatcaact
       61 ggccagccac ttgtgccagg ctcctcccac gctgtgggaa tcattttggt cgctgatggg
      121 ggattggtca acccccgaat cgggccggga ggtgcataaa caaggggtag gatcgcttac
      181 ccaggtcatt gatatggcta aagaattaga ggccgatcga ctcgctgttc agatcttgga
      241 tctggccgga tacgacccgc gggcggtgtt gacggtggca agacgtctcc ccgcagggga
      301 tggttttcat cgtttacgcg atcagcgcag gatccgcgcc ttggaggatt tactggtggg
      361 atacccatcg cgatccgaaa aaggttctaa aggttctaag gaattgcagc gagtcaaacg
      421 tgagctggca agccagtaac ttgcgtttta cggagtctat gagtcttccc ggggagcagc
      481 cggaagttaa agacaaaaaa gatgaccggg tctaataaga gttcttaaga gacccggcca
      541 aaaggcagag cggataaggg aggggagggg aaaccgctct gccaactaag ttatcggcca
      601 aacacgttga atactttagg cgaattttcc tatctcgcat tgtcgggact gaatggctat
      661 ggatatcctg actgaactct atcggatcct gccgcctcaa gcggtcatta ctgacaacga
      721 gtcaaaacgg ccttatgaat gcgacggcct gtccgcctac cgtcagttac cgggcgaggt
      781 ggtcttgccc gataccgtag aacaggtaca ggccatcctt aagctatgcc accgatataa
      841 gacccctgtg gttcctcggg gtgcgggcac cggcctctcg ggaggcgcgc tgcccctcgc
      901 tcaaggggta ctgttaagcc tgacgaaatt caatcggatc ctggcccttg atcctataaa
      961 tcgcaccgcg accgtcgagc ctggcgtgcg gaaccttgct atctctgagg cggtcgcggg
     1021 ttacggcctt tactatgcgc cggatccctc ctctcagatc gcctgcacca tagggggtaa
     1081 cgtcgcggag aattcgggtg gcgtgcattg cttaaagtat gggctcacag tgcacaatat
     1141 tctgggcttg aaggtcctga ccctagcagg cgatctcttg gagctggggg gccagtgttt
     1201 ggatagtcca ggctatgatc ttcttgcact catcacaggc tcagaggggt tactgggcgt
     1261 agtcgtcgag gtcacggtca aactgctccc caaaccgcct tatgctcaag tgttgctcgc
     1321 ggccttcgac cggatcgagt cggccggtgc ggcctgcgcg gctattatcg cttgcgggat
     1381 cctgcccgct gggctcgagc tgatggaccg ggcggctacc tgc
//
LOCUS       DASQSL010001182         1540 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_62182, whole genome shotgun sequence.
ACCESSION   DASQSL010001182 DASQSL010000000
VERSION     DASQSL010001182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62182"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..153)
                     /locus_tag="VE844_12180"
     CDS             complement(<1..153)
                     /locus_tag="VE844_12180"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC02079.1"
                     /translation="MRTSDILLAFPTVLLAIAIVSAFGPGLRNAMLAIAIIYLPRFVR
                     IVRASIL"
     gene            complement(405..545)
                     /locus_tag="VE844_12185"
                     /pseudo
     CDS             complement(405..545)
                     /locus_tag="VE844_12185"
                     /inference="COORDINATES: protein motif:HMM:NF024313.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(695..>1540)
                     /locus_tag="VE844_12190"
     CDS             complement(695..>1540)
                     /locus_tag="VE844_12190"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC02080.1"
                     /translation="DLGLDRPLVVQYVFYIRNILTGNLGRSIHTHTRVSEELLQRFPA
                     TIELSLTAMSIAVCFGVLAGILSATRQYSILDSGFMFLSLAGVSMPIFWLGLMMIWAF
                     ALVLGVFPPSGRLDVRLFLETITGFHLIDSLLTHQWEAFWDALWHLVLPSLTLSTVPL
                     AVMARMTHASLLEVLRQEYITTARSKGLNEWVVIRRHALRNALIPILTIGGLQFGIPL
                     GGAILTETIFSWPGLGRLLYNAVLARDYPLVQGATLLIAATFSVINLSVDLLYAVINP
                     RIRYE"
BASE COUNT          367 a          435 c          476 g          262 t
ORIGIN      
        1 caggatgctg gcgcggacga tgcgcacaaa gcgcggtaga tagatgatgg cgatggccag
       61 catagcatta cgcaggccgg gcccgaaggc cgagacaatg gcgatggcga gcagcacggt
      121 gggaaaagcc agcaagatat cactggtccg cataatggcg tgatcgagca gttttcccca
      181 gcgaccggtc gtatagaagc ctgccagcag cccagcacga gccctcctgc cacggcgagg
      241 ccgatggaga caaaccccac agttagggag atacgcgcgc catagataat acggctcagg
      301 atatcgcgcc cgaaatcatc ggtaccaagg aggtgggcac gtgacggcgg ctgcaggcgc
      361 tcatccagat tctgggccag tgggtcatag gggctgagca tgggcgcgaa gagggccgcg
      421 gcgaagaagc agagggtcac aatccatccc gccatcccac cggggtgctg catgaggcga
      481 tagaggatgt cacgtgacgg gctcattggt tcgatcggtt ctgcgctcgg cttaatcgtt
      541 ggcatggcaa cttgggtttc tattcctttc cccctgacag gggaagactg ggctaggggg
      601 tgcaaggaca ccttctatcc cccacctgca tcctctccca tgaggaggga ggaaagattt
      661 cggctacgcc atagctctgc aggaggggga gatttcattc ataccgaatc ctcgggttga
      721 tcaccgcgta cagtaaatct acgctcaggt taatgaccga gaacgtcgcg gcgatcagca
      781 gcgtcgcccc ttgtaccagc ggataatccc gtgccagcac ggcgttgtag agcaagcgcc
      841 ccagtccagg ccaggagaaa atagtttccg tcaaaatggc cccgcccagc ggtatcccga
      901 actgcagccc gccgatggtg agaatcggaa tcaacgcatt gcgcaaggcg tgccgcctga
      961 tcaccaccca ttcgtttaag cccttgctgc gcgcagtggt gatgtactct tggcggagta
     1021 cttccaagag actcgcgtgc gtcatgcgtg ccataacggc aagcggcacg gtggagagcg
     1081 tcagactggg caacaccaga tgccacagcg catcccagaa ggcctcccac tggtgcgtca
     1141 ggagactgtc gatgagatga aagcccgtaa tggtctcgag gaacagccgc acatccaggc
     1201 gccctgaggg tggaaatacg cctagcacca gggcaaaggc ccagatcatc atcagtccca
     1261 accagaaaat cggcatggag acgcctgcca gtgacaggaa cataaaaccg ctgtcgagga
     1321 tggaatattg gcgcgtggcc gacaagatac cggccagcac cccgaagcat acggcaatgc
     1381 tcatggccgt gaggctcagc tcgatagttg ccgggaagcg ctgcaggagt tcctcagaga
     1441 cacgcgtatg ggtgtggatg gagcgtccca gattgccggt cagaatattc ctaatataga
     1501 agacatactg cacgaccagg ggccggtcca gcccgaggtc
//
LOCUS       DASQSL010001183         1506 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_159083, whole genome shotgun sequence.
ACCESSION   DASQSL010001183 DASQSL010000000
VERSION     DASQSL010001183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159083"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..547)
                     /locus_tag="VE844_12195"
     CDS             complement(<1..547)
                     /locus_tag="VE844_12195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02081.1"
                     /translation="MKTAIRFFFMIQFILVLGLAGFWPGSAAAQQLSKPESTIAALLK
                     QARQALAQDRLTLPPDHSAVSYAERVLDLDPDNPQAAQILGDVVKRYNSLGTAVMDRA
                     KALQAQEMEKAQTFQQRGEQVAKQYSVPESAMAPLNGRLAAENASKPALAAEQAALRQ
                     QLAEIAAGYVALGEDTLSRGYL"
     gene            complement(687..>1506)
                     /locus_tag="VE844_12200"
     CDS             complement(687..>1506)
                     /locus_tag="VE844_12200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02082.1"
                     /translation="IAVLLTKAREALTNNQLSTPAGRNTLEYTGQILRLDPAHPEARQ
                     ILSEVVTRYATLSETAVAGNQLDQARRYQQAAEELVRRYGLADAEIRGLAEHIAAYEQ
                     QLAEEALKQQQLREEANKKQAEEAKRLADQQRKAAEQQQEQIKAAKPRKERKEQTAKV
                     QPKKRPPARQQERPASEPIPQVEETAKAAPEKAVPATPPSPPEQPVLKPAKVRPEPEK
                     RSAEAAVLAEERRQLELERQKLRAEQERLKQELSRPAPSPRLRQDPNTFIPPSF"
BASE COUNT          237 a          455 c          420 g          394 t
ORIGIN      
        1 tcaggtagcc acggcttaga gtgtcttcgc caagcgccac ataacctgcc gcgatctccg
       61 ccaactgctg ccgcagtgcc gcctgctcag ccgccaatgc cggcttcgag gcgttctctg
      121 ccgccaggcg cccattcaaa ggcgccattg cactctccgg aacactatac tgttttgcta
      181 cctgctcacc ccgctgttgg aaggtttggg ccttttccat ctcctgcgct tggagcgcct
      241 tggcccggtc catcaccgct gtgccgaggc tattatagcg cttcaccaca tcccccagga
      301 tctgtgccgc ttgggggtta tccggatcga gatcgagcac tctttcagca tagcttaccg
      361 cgctatggtc tgggggtaag gtgagccgat cctgcgccaa cgcctggcgc gcctgcttaa
      421 gtaacgcggc gattgtggat tctggcttgc tcagttgctg agccgctgcg ctccctggcc
      481 agaagccggc aaggcccagc actaagataa actgtatcat gaaaaaaaac cgaattgccg
      541 tcttcatagt tcactcctta ggttaaatta aatctatcgc catcgacttc aggggcgcac
      601 cgctctttag cgcgttctct gcaagagagg gttagaccaa gtcgaggtgt acaacgggaa
      661 cagcttccgt cctttctggc gttcagctaa aaactcgggg gtataaatgt attagggtct
      721 tgcctgagtc tcggcgatgg cgccgggcgg ctcaattcct gtttgagacg ctcttgttcg
      781 gctcgtaatt tctgccgctc tagctccagt tgccgccgtt cctctgccaa tacggctgcc
      841 tcggcagacc ttttttctgg ttccggccga actttcgccg gcttcaatac gggctgctcc
      901 ggcggcgagg gtggggtagc gggcacggcc ttttccggag ccgctttagc cgtttcctca
      961 acctgaggga ttggctcaga tgcaggccgt tcctgctgcc gcgcaggcgg ccgttttttg
     1021 ggctgcactt tggccgtttg ctccttgcgc tctttacgtg gctttgccgc ttttatctgc
     1081 tcctgctgtt gttcagccgc cttgcgctgc tgatcggcca gacgcttggc ctcttccgct
     1141 tgttttttgt ttgcttcttc ccggagttgc tgttgcttca gcgcctcttc agcaagttgt
     1201 tgctcatagg cggcgatatg ctccgcaagc ccgcggatct cggcatctgc caacccatag
     1261 cgccgtacca attcctcggc ggcctgctgg taacgccggg cctgatccaa ctgatttccg
     1321 gccacagctg tttcgctgag cgtggcatag cgggtcacta cttcgcttag gatctgccgg
     1381 gcttccgggt gtgcgggatc gagtcttagg atctgcccgg tgtattcgag ggtattgcgc
     1441 ccggcaggcg tagagagctg attgttagtc aatgcttctc tggccttagt caagagcacg
     1501 gctatc
//
LOCUS       DASQSL010001184         1107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_23408, whole genome shotgun sequence.
ACCESSION   DASQSL010001184 DASQSL010000000
VERSION     DASQSL010001184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23408"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(98..850)
                     /locus_tag="VE844_12205"
     CDS             complement(98..850)
                     /locus_tag="VE844_12205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02083.1"
                     /translation="MLARRLLLILALSLPAATSAWEESFPAVARSWDEQQVLNFILAR
                     SPILKGYQVVTKEYTPSKPMQRVLEHTSVFARVSPSDLDGTQTTASSDNFLVSAGTTV
                     GVQLSIPLASRKEEREHALKALDEIKAVEQLRATVLQDLGVLRQHEADYQATQLRIAL
                     WKDKSGWSQQRVNAGYDDVSGLWDVAQKLNEEKTNLGKLSLAITSQQHRVAAYAGEAW
                     QELLDMLRADKDPKKGDSMAQLPEAQLPELAP"
BASE COUNT          211 a          320 c          332 g          244 t
ORIGIN      
        1 cccgtacaac gtccgcgacc agctcgtccc taccaatcag ccctgtaatc cgtttcgtac
       61 gttcgtcctt gggtaagggg ttggggaagg gtgaaaccta gggggcaagc tcaggtaatt
      121 gagcctcggg taactgagcc attgagtcgc cttttttcgg gtccttgtcc gcacggagca
      181 tgtccagaag ctcttgccac gcttcgcctg cgtaagcggc tacccggtgc tgctgcgagg
      241 tgatagcgag gctcagctta cccagattgg tcttttcctc gttgagtttc tgggcgacgt
      301 cccaaagccc actaacatca tcgtatcctg cgttgactct ctgctgagac cagcccgact
      361 tgtccttcca gagggcaatt cgtagttgcg tagcctgata gtccgcctcg tgctgccgga
      421 gcaccccaag gtcctggagc accgttgcgc gtagttgctc gacggccttg atctcatcga
      481 gggccttcag cgcgtgctcg cgttcctcct tgcgcgaggc taggggaatg ctgagttgca
      541 cgcccaccgt tgtgccagcg gagaccagga agttgtcgct gctcgccgtc gtctgggttc
      601 catccaggtc cgagggagag acgcgggcga atactgatgt gtgctccagc acccgctgca
      661 tgggcttgga aggggtgtac tctttggtca cgacttggta ccccttgagg atggggctgc
      721 gggccaggat aaagttcaga acctgctgct catcccaaga tctagcaacg gccgggaaag
      781 actcctccca ggccgaagta gcggccggga gagatagcgc gaggatgaga agtaagcgtc
      841 gtgcgagcat ccgtgttctc cagataagtc tgttgctaat ccaacaccct ctcccatacc
      901 tttggtggaa tgtactcaag ggcggggaag cagagcggaa agaaaaacag gcgtgctatc
      961 agcacgaccc ggtggtggtc ctgatgtgcc ccacgccctc cacagtcatc accctgctct
     1021 tgcctacgct ggaattgcac agggtgaacg tctcagcagc gttgcttgtg ctgtagccgc
     1081 ttctctgaaa gccaaggcaa gcgggcg
//
LOCUS       DASQSL010001185         1425 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_89284, whole genome shotgun sequence.
ACCESSION   DASQSL010001185 DASQSL010000000
VERSION     DASQSL010001185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1425
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89284"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..238)
                     /locus_tag="VE844_12210"
     CDS             complement(<1..238)
                     /locus_tag="VE844_12210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013304537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02084.1"
                     /translation="MTHPGRSSGAVISLVLRFLIGLVVAVMSLVGYFAAREYNPATEE
                     VQYIGMTVEQEIALGLQAAPKVAAQYGGLDPDEKV"
     gene            328..1242
                     /locus_tag="VE844_12215"
     CDS             328..1242
                     /locus_tag="VE844_12215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012109664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HZC02085.1"
                     /translation="MIPSTLPERNAGLMRSATYASVIVACVLIIIKSIAYLLTDSVAL
                     LSTLIDSLVDAAASLINLLAVRHALTPPDPEHRFGHGKAESLAGLAQAAFITGSALFL
                     AFEAGHRLLVPRPLENTSIGIIVMLISIVLTIALVHYQCYVVRKTGSVAISADSLHYR
                     GDVLLSLSVVLSLALSALFNMKYMDPLFAIGITGYILSSAWVIASQALDHLMDRELPD
                     SDRARIRAIALAHPEVRNMHDLRTRTSGQTTFIQLHLEMAGAMSLLRAHAISDEVEAA
                     IRRAYPNAEVIIHEDPEGIYERRSALEG"
BASE COUNT          290 a          417 c          377 g          341 t
ORIGIN      
        1 ggaccttctc atcggggtcc agtcccccgt attgggcagc caccttgggt gcagcctgaa
       61 gccccaaggc gatctcctgc tcgacggtca taccgatata ctggacttct tcggtcgcag
      121 ggttgtactc cctggcggcg aagtaaccta ccaacgacat aacggcgacg acgaggccga
      181 tcagaaaccg cagcactaag gagatcacgg ccccgcttga tcggcccgga tgagtcaccc
      241 taccattcct ctatcgatta ttatgcttta tgcatcacta tcttcagtat agttttggca
      301 acccagcccg acttacgggg acccctgatg ataccttcga ctttacctga gcgcaatgca
      361 gggttaatgc gcagtgcgac ctatgcctcg gtcatagtag cctgcgtgtt gatcatcatc
      421 aaaagcatcg cctatctcct gacggactcg gtagcgctgt tgtcgacgct gatcgattcc
      481 ctggtcgatg ccgcggcttc gcttatcaat ctgcttgcag tccggcatgc cctcacgccc
      541 ccagatcctg agcaccgctt cggccacggc aaggcggagt cgcttgcggg gctcgcacag
      601 gcggctttta ttaccggctc agcgctgttt ttagcctttg aggcggggca ccggctgctt
      661 gtgccgagac ccttggaaaa tacgagcatc ggcattatcg tcatgctgat ctcgatcgtg
      721 ctcaccatcg ctctcgtgca ctatcaatgt tatgtggtgc gcaagacggg ctccgtcgcc
      781 atcagtgcgg attccctgca ttataggggc gatgtattac ttagtttgag tgtcgtgctc
      841 tccctcgcat tgagcgcgtt gttcaacatg aaatacatgg acccgctctt tgccatcggg
      901 atcacgggtt atatcctctc cagcgcctgg gtgatcgcct cgcaggcgct ggatcatctg
      961 atggaccggg aactgcccga tagtgaccgg gcccgcatac gggccattgc cctggcccat
     1021 cccgaggtca ggaatatgca tgatctgcgc acccgcacct cggggcaaac gaccttcatc
     1081 cagcttcatc tggaaatggc gggggctatg agtctgctcc gcgcccatgc gatctccgat
     1141 gaggtcgagg ccgcgatccg ccgcgcctat cccaacgccg aggtgatcat ccacgaagat
     1201 cccgaaggga tctatgaacg gcgttcggct ctggaaggct aggtagaaat aggggtcaaa
     1261 cttgaatggc acttcctgaa acgggttagc tcattgtttt taaaaggatc ttcgcgaaag
     1321 gcgtatttca taaaaaatcc tttaaagtca atttattgcc tttgtttgac cctcctccag
     1381 aaagtgccat tcaggtcaga ctggaatggc acttcctgag ctacg
//
LOCUS       DASQSL010001186         2359 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_169179, whole genome shotgun sequence.
ACCESSION   DASQSL010001186 DASQSL010000000
VERSION     DASQSL010001186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2359)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2359)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2359
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169179"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(110..1225)
                     /locus_tag="VE844_12220"
     CDS             complement(110..1225)
                     /locus_tag="VE844_12220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
                     /protein_id="HZC02086.1"
                     /translation="MDASIIKHFSILKDPRIERHKKHNLVDIIVLAIGAVLSGAEGWE
                     AIEEYGHAKLEWLRKFIPLENGVPAHDTIARVLSRVSAKGLQECFLNWVRAVHRATEG
                     PIVAIDGKRVRRSFDWGAGKGAIHRVSAWGSTNGLVLGQLKTAEKSNEITAIPHLLEL
                     LELKGGIVTLDAMGCQTEIVEKIIEKGADYVLAVKGNQGHLYEAVVDFFDTAQRAHFQ
                     GVPFDYHEETESGHGRIEVRRYWTTPVLTPLPQVSQWAGLKIIGMAESERHLGDKLTV
                     ERRYYIASLKSEARQFGQAVRGHWGIENSLHWVLDVTLREDECRIRRGEAAENFCTLR
                     HFAFNLLKQEKTMKKSIKQKRLKAGWDDTYRAKVLFG"
     gene            1474..>2359
                     /locus_tag="VE844_12225"
     CDS             1474..>2359
                     /locus_tag="VE844_12225"
                     /inference="COORDINATES: protein motif:HMM:NF025180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC02087.1"
                     /translation="MSKPSRRPTREARKEHTQKRREAQRCLRAAQAQAGVVPLRRASI
                     SNRLCPYPTEADEQGAREEAVAGQLGVFRQLLPKLLKDLGHIPDPRQPKKVKHKLTVV
                     LLYGLLSFVLQMTSRREANRELSRPAFVATLQELFPELETLPHADTLHRLLSQLDVTQ
                     LEQAHVALIRRLIRGKKFRRYLVTQCYPIAIDGTQKLVRSGQWWGEEWLERRRQTAEG
                     EQVQQYVYVLEANLVLHNGVSLPLLSAFLNYAEGDPDDHKQGCELKAFYRLAARLNAY
                     FPRLPILLLLDGLYPNGPL"
BASE COUNT          533 a          666 c          636 g          524 t
ORIGIN      
        1 tgagcacgct ctagctgcca aaagcccaaa cgggtaaaga acagtaccga taaaagggcg
       61 atgagcgtca aggtaagctt tgaccgcagg gcaagagcat taaaagtatt tatccgaaca
      121 gtaccttagc gcgataggta tcgtcccaac ctgccttgag ccgtttttgt ttgatgcttt
      181 ttttcatagt cttttcttgt ttgagcagat tgaaggcgaa atgccgtagg gtacagaagt
      241 tctcagcggc ctcgccgcgc cggatacgac attcgtcttc gcgcagggtg acatccagaa
      301 cccaatgcaa ggagttttcg atgccccaat ggccccgcac ggcttggccg aactgacgcg
      361 cttcgctctt gagcgaagcg atgtagtagc ggcgctcgac ggtgagctta tccccgaggt
      421 ggcgttcgga ttcggccatg ccgatgatct tgagaccggc ccactgtgag acctggggca
      481 agggggtcag caccggtgtg gtccaatacc gccgcacctc aatgcgtccg tgcccactct
      541 ccgtttcctc gtggtaatca aaggggacgc cttggaaatg agccctttgg gcggtatcaa
      601 aaaaatcgac gacggcctca tagaggtggc cctgattccc tttgaccgcc agcacataat
      661 cggcgccttt ctcaatgatc ttctccacga tctccgtctg gcaacccatg gcatccagcg
      721 tgacaatacc acccttcagt tccagcaatt ccagaaggtg gggaatggca gtaatttcat
      781 tggatttctc cgccgttttc agctgaccta acaccaggcc gttggtgctc ccccaggcac
      841 tgaccctgtg aatcgcaccc ttccccgcac cccagtcaaa tgagcggcgc acccgcttgc
      901 catcaatggc gacgattggc ccttctgtag ctcgatgaac cgccctcacc cagttcagaa
      961 aacactcttg cagccctttg gcagacaccc tcgagagcac ccgcgcaatg gtatcatgtg
     1021 ccggaacccc attctctagg ggaatgaatt tccttaacca ctccagcttg gcgtgcccat
     1081 attcttcaat cgcttcccac ccttccgctc cgctcaatac cgcaccgatg gccagtacga
     1141 taatgtccac taagttgtgc ttcttgtgcc gctctattcg agggtctttc agtatggaaa
     1201 aatgttttat aatcgatgcg tccatcagcc cggactcctc tctggtgacc aataaacgca
     1261 cacttgtcag cataacgcgt tgctgtcaat agctttttaa tgctcttgcc ctgggctaga
     1321 catcagccct gacgcatgtt ctgagagcgt catagaaaac agcgggttag agatagccga
     1381 aaagaaattc gtcgcacaaa agtgaagcga taatgcccag aatatggcag attctcccgg
     1441 gttcagtgag ttttcagcaa aggagaatct gccatgagca aaccgagccg tcgaccgacc
     1501 cgagaagctc gtaaagagca tacgcaaaag cgacgtgagg cgcaacggtg cttgcgcgct
     1561 gcccaagccc aagccggggt ggtgccgctg cgcagagcga gcatctcgaa ccgcctatgc
     1621 ccctatccga ctgaggccga tgaacaaggg gcgcgtgaag aggcggtagc cgggcagttg
     1681 ggggtatttc gccaactgtt gccaaagtta ctgaaagact taggccacat tcccgatccg
     1741 cggcagccga agaaggttaa gcacaagctt acggtggtgc tgctctatgg gctactcagc
     1801 tttgtgttgc agatgacctc acggcgggag gcgaaccggg aattgagtcg cccggcgttt
     1861 gtggctacct tacaagagct gtttccggag ttggagacac tgccccatgc cgatacactg
     1921 catcggctgt taagccagct tgacgtcacc cagttggaac aagcgcacgt cgcattgatt
     1981 cggcgcttga tccggggcaa gaagtttcgc cgctacttgg tcactcagtg ctatccgatc
     2041 gccatcgatg ggacgcagaa gttagtacgc agcggtcagt ggtggggcga agagtggtta
     2101 gaacggcgcc gccaaacggc cgagggtgag caggtccagc aatatgtcta tgtgctggaa
     2161 gcgaatctgg tgttgcataa tggggtgagc ttgccgctgt tgagcgcatt tctcaactac
     2221 gctgaaggtg atccagacga tcacaaacaa ggctgtgaat tgaaagcctt ctaccgcctg
     2281 gcggcgcggc tcaacgcgta ctttccccgt ctgccgatcc tgctgttact cgatgggctc
     2341 tatcccaatg gcccgctga
//
LOCUS       DASQSL010001187         1903 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_33710, whole genome shotgun sequence.
ACCESSION   DASQSL010001187 DASQSL010000000
VERSION     DASQSL010001187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1903
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33710"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            396..902
                     /locus_tag="VE844_12230"
     CDS             396..902
                     /locus_tag="VE844_12230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02088.1"
                     /translation="MYSNGDRSQSRSLPPEKLVHSTMWLDPRVRAELEREAKDRGIPF
                     SQMGAIACRDWVRYEIHRQQTTLFEAKQRHIIREEIQRLKDSLIPFEIKNAQASEQTR
                     IVMANVYKRLLKADGVTPKRFYEILDQIDTMAENNIKQRSPKFSMLVTAWEEPAMPRQ
                     PAGKEEPN"
     gene            902..1444
                     /locus_tag="VE844_12235"
     CDS             902..1444
                     /locus_tag="VE844_12235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02089.1"
                     /translation="MAVVKGNYIRRGAVGNPRAKDAVRYMQHRPERAGERVTRPLFGP
                     DGRWERVHGYQMIDDAPPGTHFYRMSINPDPATEDQRHDLDLREVTARTILRLEEMVD
                     KPILYVAAEHEAHADNRRHVYLLASVPRRLNTPELKQLTAAATAACLAQRHEREPVPP
                     SREWEDWQREPALEEDAWAW"
     gene            1432..>1903
                     /locus_tag="VE844_12240"
     CDS             1432..>1903
                     /locus_tag="VE844_12240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004072229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /protein_id="HZC02090.1"
                     /translation="MGVVGSGLHRVSSTLSWVHAHLPKTPKLYPADFAHPHEIDRLLT
                     STWHNEAGLLLGVSPFHQIYSVRSTPERRELGNILVDAPTRGRKGLLAIAQLLTWPHS
                     SVILDIKGELYAATAAYLRERGHKIRVVDPRGVGDQYDPLRGKSTERELYAVAKY"
BASE COUNT          423 a          611 c          520 g          349 t
ORIGIN      
        1 atcccgcatc ccctgtatac gaaacctact caccagtttc ttactcaatt ctgattattt
       61 ttttatccca gctgcatata ctacgcctca gtctgactga tagtctgcct gtctgacccg
      121 actctatgcc cgattctgca cagcattcgt cctcggaagg ttttgtcttt ttcaagcact
      181 ccctgctagc ctccagatcg tatgcgccac agcctcagct ggcgtccctg acggaactcc
      241 ctgcatctct cgctacagaa cacccgccgg ttgccggcag caaagggggt cacgcccgcg
      301 tgcgcggggt actgccagaa aagggcttgc tgacgcaagc cctgaaaggc acaacacagc
      361 ctgggctctc agctcatcag gagagacctc ccacaatgta tagcaatggt gatcgttcac
      421 aatcccgctc gctgcccccg gagaagctcg tccattcgac gatgtggctt gatcccagag
      481 tgcgcgccga gctggaacgc gaggcaaaag accggggcat tcccttctcg cagatgggtg
      541 ccatcgcctg ccgggattgg gtgcgctacg agattcaccg ccagcaaacc acgctctttg
      601 aagccaaaca gcgccacatt atccgggaag aaatccagcg gctcaaagac agcctcatcc
      661 cgtttgaaat caaaaacgcc caggccagcg agcagacccg catcgtcatg gccaatgtct
      721 acaagcgcct cctcaaagct gacggtgtga cgccaaagcg cttttacgaa atcctcgatc
      781 agatcgacac catggcagag aacaatatca agcagcgcag tccgaaattc agcatgctgg
      841 tcaccgcgtg ggaggagccc gcaatgccca ggcagccggc aggcaaggag gagcccaact
      901 gatggccgtc gtgaaaggca actacatccg ccgcggtgcc gttggcaacc cccgcgccaa
      961 agacgccgtc cggtatatgc agcaccggcc ggagcgggcg ggggaacggg tgacccggcc
     1021 gctcttcggt ccggacggcc gctgggagcg cgtacacggc taccagatga ttgatgacgc
     1081 gccacccggc acccatttct acaggatgag cattaaccct gacccggcca cggaagatca
     1141 gcgccacgat ctagatttgc gtgaggtcac cgcgcgcacc atcctcaggc ttgaggagat
     1201 ggtcgacaag ccgatcctct atgtcgccgc ggagcatgag gcgcatgcgg ataaccgccg
     1261 gcatgtctat ctcctcgcgt ctgtccccag acggctcaac accccagagc tcaaacaact
     1321 gacagccgcc gcgacagcag cctgtcttgc acagcgacac gaacgggagc ctgtgccacc
     1381 atcacgggaa tgggaggatt ggcagcgtga accggcattg gaggaggacg catgggcgtg
     1441 gtaggctccg gcctccaccg ggtctcctca accctgagct gggtgcacgc ccacctgcca
     1501 aaaaccccca aactctatcc cgccgacttt gcccatcccc atgaaattga tcggctgtta
     1561 acgtctactt ggcacaacga agccgggtta ctgttaggtg tctctccctt ccatcaaatc
     1621 tattccgtcc gctcaacccc ggaacgccgg gaactgggga acatcttagt cgatgcgccc
     1681 acccgaggaa ggaaggggtt actggcgatc gcgcaactcc tcacctggcc tcactcgtcg
     1741 gtcatcctgg atattaaagg cgagctttat gcagcgacgg cagcatatct ccgggaacga
     1801 ggccataaga ttcgggtggt tgacccacgg ggcgtgggcg atcagtacga tccgctgcgg
     1861 ggcaaatcga ccgagcggga gctgtatgcg gtggccaagt acc
//
LOCUS       DASQSL010001188         1062 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_33717, whole genome shotgun sequence.
ACCESSION   DASQSL010001188 DASQSL010000000
VERSION     DASQSL010001188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33717"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..385)
                     /gene="argC"
                     /locus_tag="VE844_12245"
     CDS             complement(<1..385)
                     /gene="argC"
                     /locus_tag="VE844_12245"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: protein motif:HMM:NF013298.4"
                     /note="catalyzes the reduction of N-acetyl-5-glutamyl
                     phosphate to N-acetyl-L-glutamate 5-semialdehyde in
                     arginine biosynthesis and the reduction of
                     N-acetyl-gamma-aminoadipyl-phosphate to
                     N-acetyl-L-aminoadipate-semialdehyde in lysine
                     biosynthesis; involved in both the arginine and lysine
                     biosynthetic pathways; lysine is produced via the AAA
                     pathway, lysine from alpha-aminoadipate; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HZC02091.1"
                     /translation="MEHIKVSVIGASGYGGAETVRLLATHPHVWLVHVTAETQKGLAI
                     SHLYPNLRGFVDQEMIEADLPRIGSASDVTIVSLPSGMAMNLVPELLKQGSKVIDVAA
                     DFRLKQADLYPQWYKVSHTAPEYLGE"
     gene            complement(452..814)
                     /locus_tag="VE844_12250"
     CDS             complement(452..814)
                     /locus_tag="VE844_12250"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZC02092.1"
                     /translation="MQGAVELLGAVGLAAALAVLFLLSLTAALVLLPVVGVFPTGTSS
                     VLHAIVADLVAPEARARWYGLFYMLYQGLGIVAPVLYGWFSDATELTWAMILLGILTM
                     AAAPLAVLLREQTAIVTA"
     gene            complement(799..963)
                     /locus_tag="VE844_12255"
     CDS             complement(799..963)
                     /locus_tag="VE844_12255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02093.1"
                     /translation="MNPRSLFSSLVSRAYEAYGRCTVMGTYNFAGDMGTVALPALLSD
                     LILVLSCKER"
BASE COUNT          246 a          334 c          289 g          193 t
ORIGIN      
        1 cctcgccgag atattcgggc gccgtatggc tgaccttata ccactgcgga tagaggtcag
       61 cctgcttcag ccggaaatcc gcggccacat cgataacttt gctgccttgc ttgagcagct
      121 caggcaccag attcatcgcc atcccgctgg ggagcgagac aatggttaca tcagatgcac
      181 tgccgatacg cggcaggtcg gcctcgatca tctcttgatc cacgaagccg cgcagattgg
      241 ggtagaggtg ggaaatggcc agccccttct gcgtctcggc ggttacgtgg accagccata
      301 catgcgggtg ggtggccaat agccgcaccg tctcagcgcc accatagccc gaggcaccga
      361 ttacactcac tttgatatgc tccacgtctc ttctcctgtg tgctttatct cactctaaga
      421 gagggaatag ataagcgcat gatcttgcca cctatgccgt cacaattgcc gtctgttccc
      481 gcaacaggac agccaggggc gcggcagcca tagtcagaat gccgagaagg atcatcgccc
      541 aagtcagttc ggtagcatcg ctgaaccagc cgtagaggac gggcgccact atccctaatc
      601 cctgatataa catatagaac aggccatacc accgggccct ggcctcaggg gcaaccaagt
      661 ccgcgacgat cgcgtgcagc accgaggatg tgccagtcgg aaagacgcct accaccggca
      721 agagcaccag tgctgcggtc agtgagagca gaaacagcac cgcgagggcc gcggctaacc
      781 ctacggcacc gagcagttct accgctcctt gcaactgagc accagaatca agtcgcttaa
      841 caaggcggga agggccactg tccccatatc gccggcaaag ttgtaggtcc ccatgaccgt
      901 gcaccggcca tatgcttcgt aggcccgtga caccaacgat gagaagaggg aacgagggtt
      961 catggctcac gcccaccctt agcgcgtcgc acatcccgcc ttaacaataa ggtgtcaggc
     1021 tgaacctcgc accccttgcc aagcctggtc aaacgccagg at
//
LOCUS       DASQSL010001189         1560 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_169187, whole genome shotgun sequence.
ACCESSION   DASQSL010001189 DASQSL010000000
VERSION     DASQSL010001189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169187"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1560
                     /locus_tag="VE844_12260"
     rRNA            <1..>1560
                     /locus_tag="VE844_12260"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          371 a          371 c          509 g          309 t
ORIGIN      
        1 ggggccggat ccgtgagagg acgtgctcct cgaagcggtg atggccgcag agaccaggcc
       61 caagcgactg tttactaaaa acacaggtcc gtgctaagtc gcaagacgat gtatacggac
      121 tgactcctgc ccggtgctgg aaggttaagg ggacgtgtta gctcttcgga gcaacgcgag
      181 ggagcgcgcg acccaaacca gtagtaggca agtgatgggg tgacgcagga aggtagctca
      241 accgcggcga tggttgtccg cgggtaagga tgtagggcga ggcataggca aatccgtgtc
      301 tcttgtggct gagatctgat ggggagcccg tatgggcgaa gtggataatc ctatgctgtc
      361 gagaaaaacc tctagcgagc tgtgcgccgc ccgtacccga aaccgactca ggtgatcagg
      421 tagagaatac caaggcgatc gagtgaacca tggttaagga actcggcaaa atgcccccgt
      481 aacttcggga gaaggggggc cggatccgtg agaggacgtg ctcctcgaag cggtgatggc
      541 cgcagagacc aggcccaagc gactgtttac taaaaacaca ggtccgtgcg aagtcgcaag
      601 acgatgtata cggactgacg cctgcccggt gctggaacgt taagaggacc tgttagtccc
      661 tttgggggcg aagcggagaa tttaagcgcc agtaaacggc ggtggtaact ataaccatcc
      721 taaggtagcg aaattccttg tcgggtaagt tccgacctgc acgaatggag taacgacttt
      781 cctactgtct caaccatgga ctcggcgaaa ttgcactacg agtaaagatg ctcgttacgc
      841 gcggcaggac ggaaagaccc cgggaccttt actatagttt ggtattggtg ttcggtacgg
      901 cttgtgtagg ataggtggga gactgtgaag ccggcacgcc agtgtcggtg gagtcaacgt
      961 tgaaatacca ctctggtcgt actagatatc taacctaggt ccgtaatccg gatcagggac
     1021 agtgcctggt gggtagttta actggggcgg ttgcctccta aaatgtaacg gaggcgctca
     1081 aaggttccct cagcctggtt ggcaatcagg tttcgagtgt aagtgcacaa gggagcttga
     1141 ctgtgagacg gacatgtcga gcagggacga aagtcggaac tagtgatccg gccacggcat
     1201 gtggaagcgt ggtcgctcaa cggataaaag gtaccccggg gataacaggc tgatcttccc
     1261 caagagtcca tatcgacggg atggtttggc acctcgatgt cggctcatcg catcctgggg
     1321 ctggagcagg tcccaagggt tgggctgttc gcccattaaa gcggcacgcg agctgggttt
     1381 agaacgtcgt gagacagttc ggtccctatc cgccgcgcgc gcaggaaact tgagaaaggc
     1441 tgtccctagt acgagaggac cgggatggac gaacctctgg tgtgccagtt gtcccgccag
     1501 gggcacggct ggttagctac gttcggaagt gataaccgct gaacgcatct aagcgggaag
//
LOCUS       DASQSL010001190         1133 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_159128, whole genome shotgun sequence.
ACCESSION   DASQSL010001190 DASQSL010000000
VERSION     DASQSL010001190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159128"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..962
                     /locus_tag="VE844_12265"
     CDS             <1..962
                     /locus_tag="VE844_12265"
                     /inference="COORDINATES: protein motif:HMM:NF033564.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ISAs1 family transposase"
                     /protein_id="HZC02094.1"
                     /translation="TFLALPHGIPSHDTFGRVFARLNPQRFQECFLSWTQAVAQLTEG
                     ALVSLDGKTVRASFDRATASSPLHMLSAWCSQNGGLVVGQLKTDSKSNEITAIPELLQ
                     LLLIKGCIVTIDAMGCQTHIAEQILEQGGDYLLTLKGNHTKAYTAVKQHFHQAIEHSF
                     PRRDENNFFDALDDSHGRLVRRRVWTMTDLAPLPELAKWPGLQAVLAVETIRTAHRQA
                     PVISDYRFYISSLGRSAKTFASMIRQHWDIENKLHWSLAVTFNEDRSRIRKDHAAENM
                     ASLRRVALNLLRQEPSHRVSLRQKRLLCSLDEYYLLTVIAGVT"
BASE COUNT          251 a          322 c          310 g          250 t
ORIGIN      
        1 aaaccttcct ggccttgccg catgggattc cctcgcatga cacctttggc cgcgtgtttg
       61 cacgcctcaa cccgcagcgc tttcaggagt gcttcttgtc ctggacccaa gccgtcgccc
      121 agctcaccga aggggccctt gtctcgctgg atggcaagac ggtgagagcc tcctttgacc
      181 gggccacggc gtcctccccc ttgcacatgc tctcggcctg gtgttcacag aacggcggtc
      241 tcgtcgttgg ccaactgaag accgacagca aatctaatga gatcaccgcg attccagaac
      301 tgttgcagtt gttgctgatc aaaggctgca ttgtcaccat tgatgccatg ggatgccaaa
      361 cccacatcgc cgagcagatc ctggagcaag gaggcgacta tctcctcaca ctcaaaggca
      421 atcatacaaa agcctatacg gctgttaaac agcactttca tcaggctatc gaacacagtt
      481 tcccgcggcg ggacgagaac aatttctttg acgcgctcga tgactcccat ggacgtctgg
      541 tccggaggag agtgtggact atgacggacc tcgcgcccct tcctgaactt gccaaatggc
      601 ctgggctcca agcagtgctt gcggtggaaa cgattcgtac ggcgcaccgg caagcgcccg
      661 tcatcagtga ctaccgcttc tacatttcga gtctggggcg gtccgccaag acctttgcct
      721 cgatgattcg gcaacactgg gatatcgaga acaagctcca ttggtcgtta gctgtgacat
      781 tcaatgaaga tcgctcccgt attcggaagg accatgccgc agaaaacatg gcctcgctac
      841 gacgagtagc cctcaatctg ttacgacaag aaccatcaca ccgggtcagt ctgagacaga
      901 aaagactctt atgtagtcta gacgagtact acctgctgac agtcatagct ggggtaactt
      961 aaaatgcgat caccctggcg tcatggagta ggagagggag cgagggtgat gccttccctt
     1021 tgggggcagt ttgagctggg agaggctccg tattcatatg agccgatgtc gtaggcagat
     1081 ccggcggggc gcttgttgcc gtttgcatca caagggactt ccgagtgggt ctt
//
LOCUS       DASQSL010001191         1613 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_89333, whole genome shotgun sequence.
ACCESSION   DASQSL010001191 DASQSL010000000
VERSION     DASQSL010001191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1613
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89333"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="VE844_12270"
     CDS             complement(<1..268)
                     /locus_tag="VE844_12270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005001505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HZC02095.1"
                     /translation="MNIGIRCQVSGRVQGVFFRAATRDQARRLGLSGWVRNLPTGDVE
                     VVACGSAESVAKLRAWLWQGPELARVSAVDCASIPLLHLDGFEIR"
     gene            355..702
                     /gene="arsC"
                     /locus_tag="VE844_12275"
     CDS             355..702
                     /gene="arsC"
                     /locus_tag="VE844_12275"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015004984.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0008794 - arsenate reductase
                     (glutaredoxin) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HZC02096.1"
                     /translation="MKVTIYHNPRCSKSRQTLQILQQHGIEPEVIEYLRTPPDRPTLE
                     YILTLLGIGPRELMRKNEAEYKEAGLDDEMLSLEDLVSALLAHPILIERPIVIANGKA
                     VIGRPPEKVLEIL"
     gene            710..1339
                     /gene="wrbA"
                     /locus_tag="VE844_12280"
     CDS             710..1339
                     /gene="wrbA"
                     /locus_tag="VE844_12280"
                     /EC_number="1.6.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019530546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003955 - NAD(P)H dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H:quinone oxidoreductase"
                     /protein_id="HZC02097.1"
                     /translation="MIEILVLYYSRYGNVAQMAQLVARGIEEVAECQARLRTVPAVST
                     VCEAVADEIPAQGPPYASREDLVECAGLALGSPTRFGTMAAPLKYFLDSTGDLWLSGT
                     LIGKPAAVFTSTASLHGGQESTLLSMMLPLFHHGMLVMGLPYSEPALLNTTAGGTPYG
                     ASHTAGSEGKRALTEDERRLCMALGRRLARTALDLHRTRSMRSGQAPPG"
     gene            complement(1308..>1613)
                     /locus_tag="VE844_12285"
     CDS             complement(1308..>1613)
                     /locus_tag="VE844_12285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02098.1"
                     /translation="IVAVLSVAVAVALIYACPLVMFAGMDPVEAVRNSIDTCRKNLVP
                     MAVFGGMFLFAAVVAAIPLWLGFLVLLPVTVCAVYASYKDLYSQPEPISQVEPVRSA"
BASE COUNT          357 a          518 c          445 g          293 t
ORIGIN      
        1 agcggatctc aaacccatcg aggtgcagga gggggatcga tgcgcaatcg acggccgaga
       61 cccgggcaag ctcaggcccc tgccaaagcc aggcgcgcag tttcgccacg ctctctgccg
      121 aaccgcaagc gaccacctcg acatcacccg tggggaggtt acgcacccag ccgctcagac
      181 ccaagcgccg ggcctgatca cgggtagcgg cacgaaagaa cacgccctgg accctccccg
      241 acacctggca gcgaatacct atgttcatgg gtccctcctt ctctctatac ttgatacttg
      301 tgattactga taaaattcgc gaccgcgatt cgataaatcc tctgtataaa aaccatgaaa
      361 gttaccattt atcataaccc acgctgttca aaatcccggc agaccctgca gatccttcaa
      421 caacacggga tcgaaccgga ggtgatcgaa tacctgcgaa caccccccga tcgccctacc
      481 ttagagtaca tcctcacgct tttagggata gggccccgtg agctcatgcg taaaaatgag
      541 gccgagtaca aggaggcggg actggacgat gagatgctga gcctcgagga tctcgtttcc
      601 gccctgctcg cgcacccgat cctgatcgaa cggcctatcg tcatcgccaa cggcaaggcc
      661 gtcatcggcc ggcccccgga aaaggtgctg gagatcctgt aatactcgta tgattgagat
      721 cttggtgctg tactatagcc gttacggcaa tgtggcgcag atggcccagc tcgtggcccg
      781 gggcatcgag gaggtagctg aatgccaggc ccggcttcgc actgttcccg ccgtctccac
      841 cgtctgtgag gcggtagcgg acgagatccc agcccaaggt ccaccttatg ccagccgcga
      901 ggatctggtc gagtgcgcgg gcttggcgct cggcagcccg acccgcttcg gcactatggc
      961 cgcacccctc aaatactttc tcgacagcac cggggatcta tggctctcgg ggacattgat
     1021 cggcaaaccc gccgccgtct ttacctcgac cgcgagcctc catggtggcc aggaaagcac
     1081 cctgttgtcg atgatgctac ccctgttcca ccatggcatg ctggtgatgg gcctgcccta
     1141 cagtgaaccc gcgctgctca atacaaccgc tggtggtaca ccctacggcg ccagtcatac
     1201 tgcaggcagc gagggtaagc gagcgctcac cgaggatgag cggcgcctgt gcatggcgtt
     1261 gggtcgacgc cttgcacgca ccgctctgga tctgcaccgc acccgttcta tgcgctccgg
     1321 acaggctcca cctggctgat aggctcgggc tggctataaa ggtccttata gcttgcatat
     1381 actgcacaca cggtgaccgg caacaggacc aaaaatccaa gccacagcgg gatggcggct
     1441 accaccgctg caaataaaaa cataccgccg aagaccgcca tcggcactag attcttgcgg
     1501 caggtatcaa tgctgttcct gacggcctca accggatcca tgccggcgaa catgaccagc
     1561 ggacaggcat agatcagggc cacggcgacc gcgacagaaa gcactgcgac gat
//
LOCUS       DASQSL010001192         1217 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_89337, whole genome shotgun sequence.
ACCESSION   DASQSL010001192 DASQSL010000000
VERSION     DASQSL010001192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1217
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89337"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            440..>1217
                     /locus_tag="VE844_12290"
     CDS             440..>1217
                     /locus_tag="VE844_12290"
                     /inference="COORDINATES: protein motif:HMM:NF013698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZC02099.1"
                     /translation="MSHDADYVALVGIDWADTKHDFCLRATGAAQEEYGVMGPMPEAI
                     DQWAKRLAERFPGRKIAVCLEQSKGSLIYALLKYDHFVLYPINPRTLAKFREALAPSG
                     KKDDPADAQLLLELVRKHREKLKPWRPADQHTRTLQFLVEHRRTLVQDKTRLTNRLTS
                     VLKGYFPQVLCWFAALDTPLICDCLKRWPTLQAVQKTDDATLRTFFQAHHSYHRAINQ
                     QRMDGIRQAIPATTDQAVIRSSVMLVHTLVEQVSCLTEALR"
BASE COUNT          287 a          347 c          323 g          260 t
ORIGIN      
        1 tgtaggcgtg acacgcttcg cgtgcattac gacacggcct agcgccgcgc cctactaacc
       61 aaataaattt ttccttgcta ctcaaaacgg ctattcgagc aacagcacac atcgttatat
      121 ttattcaacc gctcaaaaca acgcaaaatc accttatagt tagtcagtcc ccttttgagc
      181 catgagtctc tcggcaaccc agtagactaa tgttgacaag ttacgggggt acaccaaggg
      241 catgcatccc gcggctacgg atgaaaattt cgggtcgtca tgacgactcc ggaaagcttt
      301 tcgagctgcg ggatgtgctg tatttcgcca acgaatactc cgatgctgtc tcgctgagga
      361 ctttgctata aggccttcgc agaaatacag cccgcatgtt ccggttgcca ggagttcatg
      421 gacgggagga cgcacacaca tgagccatga cgcagactat gtcgcactgg taggcatcga
      481 ctgggcagac acgaagcacg atttttgttt acgggcgaca ggtgctgcac aggaagaata
      541 tggcgtcatg gggcctatgc cggaggcgat tgaccagtgg gccaaaagac tggctgagcg
      601 atttccgggg cgaaagattg ccgtctgtct ggaacaatcg aaaggcagcc tgatctatgc
      661 gctcttgaag tatgaccatt tcgtcctcta ccccatcaac ccgcggacgt tggcgaagtt
      721 tcgcgaagcc ttggccccaa gcggcaagaa ggatgatcct gcggatgccc agctcttgct
      781 cgaactggtc aggaagcatc gggagaaact gaagccgtgg cgtccggccg atcagcacac
      841 caggacgctc caatttttag tcgagcatcg ccggacattg gtccaggaca aaacccgcct
      901 cacgaaccgg ttgacgagtg tgctcaaagg ctatttcccg caagtcttat gttggttcgc
      961 agccctcgac acgccattaa tctgtgattg cctcaagcgc tggcccaccc tgcaagccgt
     1021 gcagaagact gatgacgcca cgttgcggac gttctttcag gcgcatcatt cataccaccg
     1081 cgcgatcaac cagcagcgga tggacgggat ccgccaggcg atccccgcca ccaccgatca
     1141 agcggtgatc cgctcctcag tcatgcttgt gcacacgctg gtcgagcaag tcagctgttt
     1201 gactgaagcg ctccgtc
//
LOCUS       DASQSL010001193         1254 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_33749, whole genome shotgun sequence.
ACCESSION   DASQSL010001193 DASQSL010000000
VERSION     DASQSL010001193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33749"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..228
                     /locus_tag="VE844_12295"
     CDS             <1..228
                     /locus_tag="VE844_12295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02100.1"
                     /translation="VSQAAEVAITHSNLMRACRDLLFQVEDRLTLELSRARLKRPIND
                     KQAIAFFESRLTEIIHTAIRQSPLPYARGGK"
     gene            complement(253..1002)
                     /locus_tag="VE844_12300"
                     /pseudo
     CDS             complement(253..1002)
                     /locus_tag="VE844_12300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492026.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
BASE COUNT          273 a          340 c          350 g          291 t
ORIGIN      
        1 gtttctcagg cggcagaggt agccatcacc catagtaacc tcatgagggc ctgtagagat
       61 ctcctcttcc aggtcgaaga tagacttacc ttggagctaa gccgcgcgag gctcaagcgt
      121 cccatcaacg acaagcaagc gatagcgttc ttcgagtcac gccttacaga aatcatccat
      181 actgccatcc ggcagagccc gcttccttat gccaggggag gaaagtaggg gcggggagaa
      241 aaattggtag tgttatagag gtaatgctgg gggtctcacg aggttgtagt cgcagatgaa
      301 gtagcagatc gctccgacgt gattttccac ttttttggag aatgcgagtg tcgcccggac
      361 caaccgagag acgcgctgcc gtagcgtggt gttgaaccgc tcgagatgat tcgttttacg
      421 ggcttttttc gtgatcgcct tatgtcgtgc cgtcgggatt acgcctttat atacctcgta
      481 ttgatccgta tagaacattg cctgctcctg gtatactgtc ggcaggttcg cccacagctg
      541 cttcgcgctg tcgcgactgc ggtcccccac gtgaaaggcc atgatttggc ggcttgacct
      601 gtccatcgcc agccagagcc agtgcttgtt tgccttgtgc ttgacgaagc tacacatctc
      661 atcggcttcg gcctccaccc gtcgcatgat cacctcgcta ggacggaggg gcagctgcac
      721 atgtcagggc tcgggtgcgg cctcaaagca agtgcccatg aagtcgataa gtcaccggat
      781 actgacacca acggcccggc aaatcccatg cagggagatt ttctccagta gtaaacgtgc
      841 gaccagagcg cgtcggttct cgtcgatgag acggctgtcg gcgtgcatga cgaattgccg
      901 gccacaggcc ttgcagcgat ggttttgttt gccagtgtgg atatggccat ttttcttgaa
      961 ctgcggggat gcacaggctg gacacgcgtc tcttgcaccc atagcttttt gctgacctcc
     1021 ctggtatcaa ttggcggttc tgaccaacca taccatagga ttgtcggccg agcattacct
     1081 ctataacact accaaaaaac ttgattgggg aataaagcat ggtactttac cctgcatgaa
     1141 cccaagatcc cgcagttgga aagaagctcg acgattacaa gcctggcacc ttaaacagca
     1201 gggttggccc cagcggcaga ttgccgaggc cctcggcgtc agcgcaggag cggt
//
LOCUS       DASQSL010001194         1443 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_159153, whole genome shotgun sequence.
ACCESSION   DASQSL010001194 DASQSL010000000
VERSION     DASQSL010001194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1443)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1443)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1443
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159153"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            114..656
                     /locus_tag="VE844_12305"
     CDS             114..656
                     /locus_tag="VE844_12305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013032343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HZC02101.1"
                     /translation="MQRQGYSTAAVILHWLIAVSIFFLFVSSWWMMGLPLPSKELTFR
                     EFPFQLHKNIGITLVIVLAILLYVRFKHRPAPPSAQEMRPWMQKLAIIDHVILYVLIV
                     AVSLSGYLSSSFTRWETTLWWLVDLPRWGRADEEMNMFFSDIHLWTAWALLAVVAVHI
                     SGALYHAFRNDGVVRRMLRL"
     gene            858..1037
                     /locus_tag="VE844_12310"
     CDS             858..1037
                     /locus_tag="VE844_12310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02102.1"
                     /translation="MPIDYGIRVFHAPAALDGLLVAVLILSPESLAATRAALANQLQR
                     SVNLYSWDRRWPRSA"
     gene            1049..1237
                     /locus_tag="VE844_12315"
     CDS             1049..1237
                     /locus_tag="VE844_12315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02103.1"
                     /translation="MLTIGFITGQTIILGLDAVDTTLLLLTLAVSTLTFASARTNVLL
                     GVVHLLLFLAYLMLILEK"
BASE COUNT          287 a          402 c          387 g          367 t
ORIGIN      
        1 gtatgcgttt ataaccgttt gatatattcg ggaagtagct cgataagcaa catgtctgga
       61 acactaccgt ctcgcacaat tcaaagactg aatttcaaaa aacggaatcc gttatgcaaa
      121 gacaaggcta cagtacggca gcagttattc tgcattggtt aatagctgtc tccatctttt
      181 ttctgtttgt ttccagctgg tggatgatgg ggctgccact gccatcaaag gaactgactt
      241 tccgtgaatt cccgttccag ttgcataaga atattggcat tacgctcgtt attgttctcg
      301 cgatcctgct ttatgtccgt ttcaagcacc gcccggcacc gcccagcgcg caggagatgc
      361 ggccgtggat gcagaagctc gcgattatcg atcacgtcat tctttatgtg ttgatagtcg
      421 ctgtctccct cagcggttac ctgtcttctt cattcacccg ctgggagacg acgttatggt
      481 ggctggtcga tttgccacgg tggggcaggg cagatgaaga gatgaacatg tttttttctg
      541 atattcacct gtggacggcc tgggcgttgc tggcggtggt ggcggtgcac atcagcggcg
      601 ctctatatca cgccttccgc aatgacggtg ttgtgcgccg catgctgcgt ttgtaaatat
      661 tttctatgac gtgaccatca gggccgctca agtaaagtgt aataggggac gaccacgatg
      721 tcagagcaga ttgatctgcc ccacacgggg ctgggccttc ggtctgccgg ccttgccttt
      781 ggtggcacgc ctgcccagcg ctcgctcggt ttcagcctga aaccgagggt tacccagcgc
      841 tatagtggcc gtgggctgtg ccgatcgact acggcattcg tgtctttcat gcgcccgcgg
      901 cgctggacgg tttgctcgtg gcggtattga tcctgtcgcc ggagtcgctg gctgcgactc
      961 gtgcggcgct ggcgaaccaa ctccagcgtt ccgtcaatct atactcctgg gatcggcgct
     1021 ggccacgatc agcctgacca taccatcggt gctgacgatc ggtttcatca cgggacaaac
     1081 tatcatcctc ggactcgacg ccgtcgatac gaccctgctg ctattaacgc tggccgtgag
     1141 caccctcacg tttgccagcg cgcgcaccaa cgtcttgctc ggcgtggtgc atctgctctt
     1201 gttcctcgcc tacttgatgc tgatcttgga gaagtaaaag gacactcctc cacccttcta
     1261 cccaccccgc ctctctctaa aggggtaggt attgtcctac cacaacctgc gggcgggcgg
     1321 ccaggcgtga cgttattctg aacaccagaa gccagccaca ggccaagctt tgccgcagcg
     1381 aaatacacca aagtgaaggc ggtaatgccc accaaatatt tcaggttcag tagttccaag
     1441 ttt
//
LOCUS       DASQSL010001195         1257 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_89367, whole genome shotgun sequence.
ACCESSION   DASQSL010001195 DASQSL010000000
VERSION     DASQSL010001195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1257
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89367"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1257)
                     /locus_tag="VE844_12320"
     rRNA            complement(<1..>1257)
                     /locus_tag="VE844_12320"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          226 a          417 c          301 g          313 t
ORIGIN      
        1 cttgctctca cctgggttca gctcaccgct taggccagac cctctcgggc ctggctgacc
       61 acggatcgcc tctgccaggc gacaccttgc ggtgcaaacg atctctggtg gttccggaat
      121 atgaaccgga tgtccatcgc ctacgacgtt cgtcctcggc ttaggcccga ctaaccctga
      181 gcggacaagc cttcctcagg aaaccttagg cttacggcgc gtgggtttct cacccacgtt
      241 gcgctactca tgccgacatt cgcactcccg tacgctccag ccgtcctcac gatcgacctt
      301 cactgcgaac gggacgctcc cctaccgccc tacgaccggc gaaccggccg tctgactcgt
      361 agcttcggta ccaagcttga gccccgttgg atcttcggcg cagaaccact tgaccagtga
      421 gctgttacgc actctttcaa tgatggctgc ttctaagcca acatcctggt tgtctgtgca
      481 actccacatc ctttaccact gagcttggat ttagggacct tagctgacga tccggactgt
      541 tttccttttg accacgaagc ttagccctcg cagtctcact cccgagctct ggaatcatgg
      601 gattcggagt ttgattgggt ttggtaagcg ggaagccccc tagcccattc agtgctctac
      661 ccccgtgatt gaacgctcga ggctagccct aaagctattt cggggagaac cagctatctc
      721 cgggttcgat tggcatttca ccgctatcca cagctcatcc cctagctttt caacgctagt
      781 gagttcggtc ctccacgaga cattactccc gcttcaacct ggccatggat aggtcacccg
      841 gtttcgggtc tactgcgcgc gactcgacgc cctgttcaga ctcgctttcg cttcggctcc
      901 gtccttcgcg gacttaacct tgccacgcac acgtaactcg tcggctcatt cttcaaaagg
      961 cacgccatca ggctaccggc ctctcagccg gcaacaccct ttgactgctt gtgggcacgt
     1021 ggtttcaggt actatttcac tccccttccg gggtgctttt cacctttccc tcacggtact
     1081 cgttcactat cggtcgccaa gagtatttag ccttggacgg tggtccgccc agcttcccac
     1141 atgagagacc ttccacgtgg tactcaggtg gttgacctac gaaggccgat cgctttcgcc
     1201 tacggggctg tcaccctcta tggctagcct ttcctgacaa attcgactaa cgatcgg
//
LOCUS       DASQSL010001196         1627 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_187088, whole genome shotgun sequence.
ACCESSION   DASQSL010001196 DASQSL010000000
VERSION     DASQSL010001196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187088"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            263..1534
                     /locus_tag="VE844_12325"
     CDS             263..1534
                     /locus_tag="VE844_12325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02104.1"
                     /translation="MDTQTSEQALRYEAVLRRALGHRVCDICRDLERSPRWLNKWWRE
                     FKAHPETDFAEQARAPHTSPHKTAEEVEQAIIAIRRVLEAGATPETRYGLIGARSIQG
                     KLERLGIKHPPSEATIQRVLAKHHLTHPLGANHESAYYPWPAAWEMNAIFATDIITKH
                     LRGGMAIENFHTLDLYSHAVCLTQHLDKTSVTARAHLLRSWRQLGRPFVHQFDNESAF
                     NGGPTHQRVLGQVVRCCLYCQVEPFFTPVYEAKRNHQVETFHSLWVASFWSRHTFGSC
                     AEVRSELPLFLRWYRHEYRPPALEGKTIAQVRRGFHPPALTSPLSKLIPEGYLPLCAG
                     RIHIMRKVDPQGTVAFLNESWLVGKQWRGEYIRATIDTARQQVSFWHKPDEDADWRCL
                     KTRLFRIHETVHDVVPALRRKSERCRDCLPS"
BASE COUNT          373 a          444 c          464 g          346 t
ORIGIN      
        1 tgaggaggcg ctggcggcga ttatgtcgac tcagcataac gcactataaa tgcgttcatg
       61 ggccgcttaa attgcttcgt gcgtattccg tagaagcatt tgccaatgag ggcaagacca
      121 ataagtagta tagcagttag ctctcaataa tcaggacatc gttccgattc gagcaatcag
      181 gacatcgttc cgatgctagt aaccaaattc aatcaggaca tcgttccgag tggctgcatg
      241 atttctccac agaggaggaa tcatggacac tcaaacatcc gagcaagcat tacgttacga
      301 agccgtgttg cggcgtgcat tgggccaccg cgtgtgcgat atatgtcgcg atttggagcg
      361 cagccctcgt tggttgaaca aatggtggcg cgaattcaaa gcccatccgg agaccgactt
      421 tgcggagcag gcgcgtgcgc cacatacttc gccacacaaa acagccgaag aagtcgaaca
      481 agcaattatc gccatccggc gagtgctgga agcaggtgcg acccccgaga cgcgctacgg
      541 tttgatcggc gcgcggtcta ttcaaggcaa actggaacgg ctcggcatca aacacccgcc
      601 gagcgaggcg acgattcaac gcgtactggc caagcaccac ttgacgcatc cgctgggagc
      661 caatcacgag agcgcttatt atccgtggcc agcggcttgg gagatgaatg ccatctttgc
      721 gaccgacatc atcaccaaac atttgcgtgg ggggatggcg atcgagaatt ttcacaccct
      781 cgatctttac tcgcacgccg tctgcttgac acagcatctg gacaaaacca gcgtgacggc
      841 gcgcgcgcat ctgctgcgga gttggaggca actgggccgt ccctttgtcc atcagttcga
      901 caacgagagc gccttcaatg gcgggccaac tcatcagcgt gtgctcggtc aggtagtgcg
      961 ttgctgtttg tactgccagg tcgagccatt ctttacgccg gtttacgaag ccaagcgcaa
     1021 tcaccaagtc gagacgtttc acagtctctg ggtagcaagc ttctggtcgc gccacacgtt
     1081 cggcagttgc gccgaagtgc gcagcgagtt gccgctcttc ttgcgctggt accggcacga
     1141 gtatcgtcct ccggcgctgg agggcaagac gatagcgcaa gtgcggcgtg gatttcatcc
     1201 accggcgttg acctcaccgt tgtcgaagct gattcccgag gggtacttgc cgctgtgtgc
     1261 ggggcggatt cacatcatgc gcaaagtcga tccccaaggc acagtcgctt tcctcaacga
     1321 gtcctggttg gttggcaaac aatggcgggg cgaatacatc cgcgccacca tcgacaccgc
     1381 ccgacagcag gtgagcttct ggcacaagcc tgatgaggac gccgattggc gctgtctcaa
     1441 aacgcgcttg ttcaggattc acgagactgt gcatgatgtg gtaccagcac tcaggagaaa
     1501 atcggaacga tgtcgtgatt gcttgcccag ttagactttg tgcaaaaaaa ccggaacgat
     1561 gttctgctta ttgagagtta gcagttggca catcaggact cgtcggtctg aggcgaagcc
     1621 tcgctag
//
LOCUS       DASQSL010001197         1184 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_62417, whole genome shotgun sequence.
ACCESSION   DASQSL010001197 DASQSL010000000
VERSION     DASQSL010001197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1184
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62417"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            213..950
                     /locus_tag="VE844_12330"
     CDS             213..950
                     /locus_tag="VE844_12330"
                     /inference="COORDINATES: protein motif:HMM:NF014430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02105.1"
                     /translation="MALELFCKLHQPATLAYLQANPPLEAARATSVEELTLLLRQQRH
                     PQPQRTATRIYSQVHQPQLQADPVTTRTKSRLMLVLVGQLALLVEQIKAYDQEIHHFF
                     VLHPDSSLFCSLPRAGKRLAPRLLAEWGDDRERYTGAGSIKALAGTSPVAYQSGSYRK
                     AHKRYACVKPWCNALHQFAWQSSRKEPWAGEFYQGKRAEGKSHSMAVRALANLWVRII
                     YAMWLKHEPYDASTFLAARQAHARVAA"
BASE COUNT          243 a          386 c          311 g          244 t
ORIGIN      
        1 ccgtaagcct tctggggcca agactgatgc catcgatgcc tacttgctgg ccggactagt
       61 cgcagcgacc tggcagacct gcgccccccc cccaaccgga cagtcccctg gtccaggaac
      121 tcaaagccct cagccgagac ctggaagctc tgatccagag ccagacccgg ctggtcaacc
      181 agctcaccgc ctgcttgaag gagtactagc cagtggctct ggaactgttc tgcaagctgc
      241 accaacctgc caccctggcc tacctccagg ctaatccccc gctggaagcc gccagagcaa
      301 cttcggtaga ggagctcacc ctcctcttac gccagcagcg tcatcctcag ccccagcgca
      361 ccgccaccag gatttactct caggtgcacc agccccaatt acaggctgac ccagtcacta
      421 cccgcaccaa gagccggttg atgctggtgc tggtagggca gttagccctc ctggtggagc
      481 agatcaaggc ctacgaccag gagatccacc attttttcgt cctgcacccg gatagctccc
      541 ttttctgtag cctgccaaga gcggggaaac gcctagcacc caggctcctg gcggaatggg
      601 gtgatgaccg ggagcgatac actggggctg gcagcatcaa ggccctggcg ggcacttctc
      661 ccgtggccta ccagagtggc agctatcgca aggcccacaa gcgatatgct tgtgtcaagc
      721 cctggtgcaa cgccctccat cagttcgcct ggcagtccag ccggaaggag ccctgggctg
      781 gggagttcta tcagggcaag cgggccgaag ggaaaagcca tagcatggca gtgcgggccc
      841 tggccaacct ctgggttcgg atcatctacg ccatgtggct gaagcacgaa ccctatgacg
      901 cttccacctt tctggcagct cgccaagccc atgctagagt tgccgcgtag tgaggacgca
      961 actttttaag gtgcatttat ccttagcaat ctggtattga catagagggt cttacctcgt
     1021 tctttggatg gctacctacc tcactacgtc ttggtgttgc tagcttatca actgggcagg
     1081 tgggtcactc ataccctgtt ctctccagct ttaccccatc tttaatttcg tcattcgagt
     1141 cagggacata actcgtcccg tacctccaac accaaacggt cgtt
//
LOCUS       DASQSL010001198         1517 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_23484, whole genome shotgun sequence.
ACCESSION   DASQSL010001198 DASQSL010000000
VERSION     DASQSL010001198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1517
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23484"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..200)
                     /locus_tag="VE844_12335"
     CDS             complement(<1..200)
                     /locus_tag="VE844_12335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HZC02106.1"
                     /translation="MMIIPVVDLRNGQVVHAYRGMREHYRPVQSHLTQSSHPPEIVAA
                     FLDLFPFTTIYLADLDAIQGRG"
     gene            235..1224
                     /locus_tag="VE844_12340"
     CDS             235..1224
                     /locus_tag="VE844_12340"
                     /inference="COORDINATES: protein motif:HMM:NF014686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HZC02107.1"
                     /translation="MVCEFITGGGLSDAPIPPQLAAEGMMMLEAVVKDLTALGGMALS
                     TTRDSRFKPWALPLRVKEVSSTEVAWAQWRLMIDHAEAVWPIAPETGGVLERLSRLIL
                     EGRRILIGSQPEAVAIAASKLATARCLKEHGIAVVETVAAGSSIPDSDRGWVVKPDDG
                     AGCEDIYYFKEREDVGRWLEHRPYAGSVIQPYIAGIPASLSLLCRDGAARTLACNEQL
                     IEIKGHRLHCSGIVVNAMPGDRDRLEPLALEIARALPGLWGYVGVDIIVTPAGPVVIE
                     INPRLTTSYVGLKASIGRNPAGLILSLLQGDNGLGMSSSLTDEPVKVMIPPVC"
     gene            complement(1268..>1517)
                     /locus_tag="VE844_12345"
     CDS             complement(1268..>1517)
                     /locus_tag="VE844_12345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02108.1"
                     /translation="DPGYFYISDEDAQSISGKLIIQMLWYGDSRSLFTYEFIEELLKK
                     AEFHQVKRCGYKQTASPFKEIVALDNRERESLFVEAVK"
BASE COUNT          329 a          373 c          463 g          352 t
ORIGIN      
        1 ttccctcggc cctgaatggc atcgagatcg gcgaggtaaa tcgtcgtaaa tggaaagaga
       61 tcgagaaagg cagcgactat ctcaggcggg tggcttgatt gggtcaagtg tgattgaacg
      121 ggtcgataat gctcgcgcat gccgcgatag gcatgaacga cctggccgtt acgtaagtca
      181 accacaggaa tgatcatcat agagcacatt gctaaagggt aaagagtgcg gatcttggta
      241 tgcgagttta tcacaggcgg gggtttgagc gatgcgccga tcccgcctca attggcggct
      301 gaaggcatga tgatgctgga ggcggtcgtc aaagatctta ccgcgctcgg cggtatggcg
      361 ctcagcacta cccgcgacag ccgttttaaa ccttgggctt tgccccttcg agttaaagag
      421 gtgtcctcga cagaggtggc ttgggcccag tggcggttga tgatcgatca cgccgaggcg
      481 gtttggccca tcgcacctga gaccggcggt gtgcttgaac ggttgagcag gcttatcctt
      541 gaggggcgac ggatcctcat cggcagccag cctgaggcag tggctattgc agcgagtaag
      601 cttgctaccg cacgatgttt gaaggaacat ggaatagccg tggttgaaac agtagcggcg
      661 ggcagctcga ttccagacag tgacaggggt tgggtggtca aacccgatga tggggccgga
      721 tgtgaggata tctattactt caaggaacgc gaggatgtgg gtcggtggct agaacatagg
      781 ccatacgccg gttctgtgat ccaaccctat atagcgggga tcccggctag cctgtccctg
      841 ttatgtcggg acggagcagc gagaaccctg gcatgcaatg aacagctcat cgagataaag
      901 ggccatcggc tgcattgttc cggaatcgtg gtaaatgcca tgcctggaga tcgggaccgg
      961 ctcgaacctt tagcgcttga gatcgcgcgc gccttgcctg ggctttgggg ctatgtgggg
     1021 gtcgatataa tagtgacccc ggcggggccc gtagtcatcg agatcaaccc ccgcttgacc
     1081 acatcctatg tggggcttaa agcttctatc ggccgcaatc cggcagggct gatcttgagc
     1141 ttgttgcagg gcgataacgg attggggatg agctcctcac ttaccgacga acctgtgaag
     1201 gtgatgatac ctcctgtatg ttgatcgttt caggggagtg tctttcccat agaacaccca
     1261 acttcggtca tttcaccgcc tccacgaaca ggctttccct ctcccgatta tccaaggcaa
     1321 cgatttcttt gaaggggctt gcggtctgtt tgtaaccgca acgcttcacc tggtggaact
     1381 ccgctttttt gaggagttct tcgataaatt cataagtgaa taggctgcgg ctgtcgccgt
     1441 accagagcat ctggataatc agctttccgc tgatgctctg agcgtcctcg tccgagatat
     1501 aaaagtagcc tggatca
//
LOCUS       DASQSL010001199         1075 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_114446, whole genome shotgun sequence.
ACCESSION   DASQSL010001199 DASQSL010000000
VERSION     DASQSL010001199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1075
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114446"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            186..988
                     /locus_tag="VE844_12350"
                     /pseudo
     CDS             186..988
                     /locus_tag="VE844_12350"
                     /inference="COORDINATES: protein motif:HMM:NF033580.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
BASE COUNT          259 a          282 c          335 g          199 t
ORIGIN      
        1 aagaaatcga ggaggagact gtccatgggg aagtccgccg ggaacatgtg aaggtggagg
       61 gcgattccca tgaccccgat gtggagcaca gacaccagga gcgcagacac cgataaacta
      121 ggatctgttt gcaaagttta aaaggatagt tatactccct gccaaatgcg gagggggtaa
      181 ggttcatggg gcgaggtgat ctgaccgacc agcagtggca acaactacaa cctctgttgc
      241 ctccccaaaa accgactact gggcggccag ctaaggacca tcgcaccatc atcaatggca
      301 ttctctgggt gttgcgcacc ggagctcctt ggcgggatct acccgagcac tatggcccct
      361 ggcccacggt agccagccgg ttctatcgct ggcgccagga tggcctgtgg gagcggttgc
      421 tggcgtcagt gcagcagcag tccaacatcc gagggaaggt gaactgggaa cttcactatg
      481 tggatggcac catagtgcgg gcccatcagc acgcggcggg agccaggggg aaaacccaga
      541 aggcgaggct ttaggccgta gccagggagg cttcagtacc aaggtacatc tacaggccga
      601 aggtgggggt aaactgatca ctctggtgct gacgccaggc cagcgccatg aggctcccgt
      661 gtttccccag ttgatggccc aaggtgcagt gaaaggagcc aagggtagac ccaggctgag
      721 gccgcaccga gtggtgggag acaagggcta cagcagccga gccatccgcc gctatgcccg
      781 tcagcatggg atcaggatta ccatcccgcg caaagtcaat gagtgtcgga agggaccttt
      841 tgatcgggag gtctacaagc agcgtaacct ggtggagcgg ctgatcaacc ggctgaagca
      901 gtttcggcat ctggccacca ggtatgagaa acgagcagcc aactatcgag caatgtggat
      961 catagcggca accctcctat ggttgtagct tgcaaacagg ccctagaatt atcgaaccaa
     1021 ttcgggatat gtttgccacc ctgttctttg tgtcgatcgg gatgctgatt aacct
//
LOCUS       DASQSL010001200         1540 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_62434, whole genome shotgun sequence.
ACCESSION   DASQSL010001200 DASQSL010000000
VERSION     DASQSL010001200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62434"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..290)
                     /locus_tag="VE844_12355"
     CDS             complement(<1..290)
                     /locus_tag="VE844_12355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02109.1"
                     /translation="MFLTIAIAILLGFLVIFLMKKAPVPLSQEQRQAGFSDGDAPLPF
                     SLSLERFEWLCGRLLHALGLDIERSTTTGQRQLEVMAVNPAPVVGGHYVIHG"
     gene            complement(342..509)
                     /locus_tag="VE844_12360"
     CDS             complement(342..509)
                     /locus_tag="VE844_12360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005010216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02110.1"
                     /translation="MEHFWEILTKPDNLPIVGMLLAVIFCLWVAFRQALKHDRLIAQG
                     KKEDIYSEMIK"
     gene            920..1327
                     /locus_tag="VE844_12365"
     CDS             920..1327
                     /locus_tag="VE844_12365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009849631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016730 - oxidoreductase activity, acting
                     on iron-sulfur proteins as donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-thioredoxin reductase catalytic
                     domain-containing protein"
                     /protein_id="HZC02111.1"
                     /translation="MEKEPTQANVDRMWKFARTFAEKSGTAFHPSPGVTEVVVKGLAL
                     HQDELGKPLCPCNFYPDKAEEAKKRRWICACDEMQTYKYCHCLLFVRSDGLPITEYLP
                     EDHEGRQIYGLVTDPTPDKGRALRHKAGKPSEE"
BASE COUNT          327 a          447 c          461 g          305 t
ORIGIN      
        1 tcaccatgga tcacatagtg cccgccgacg accggcgccg gattcacggc catcacctcg
       61 agctgtcgct ggcccgtggt tgttgaacgc tcaatgtcca accctaacgc gtgcaggagc
      121 ctgccacaca gccattcaaa acgctccagg gagaggctaa acggcagagg ggcatcgcca
      181 tcgctgaagc ctgcctggcg ctgctcctgg gagaggggca cgggggcttt cttcatcaag
      241 aagatcacca ggaatcccaa gagaatcgcg atggcgatgg tgagaaacat cgacgcgctc
      301 ctcgcccggc aggtgcgttt tgcggccgct accgtcgcac gctatttgat catttcgctg
      361 tagatatctt ccttcttccc ttgcgcgatc aacctatcgt gcttcagagc ctgacgaaac
      421 gccacccaga gacaaaaaat caccgccaac aacatcccca cgatgggaag gttatctggt
      481 ttggtcagaa tctcccagaa atgttccata tctccggccc tctccgacaa tccgagcgat
      541 ccggtccagc gcttagagcc ccgtaaggcg agcccaaaca taattgacca tggcggttct
      601 tgtcaaggtt tttttccgcc atcaaagtgg gttagaacac cgaatgaagc gggctggcag
      661 tgacagaatc cactccggaa atcgccaggt tgatgccctc ttttccgccg cgaggctgat
      721 tcccttcccc ccatcgtatc ggcgctctaa aagggcacgg gctgcctccc cggcaatgac
      781 ggtgtggggc agattctgtg ctataatggg tggtcaaccg ctaggcggca gcgcgccgca
      841 tggtccggag agccggcgcg tcatgccgtt acctgttgac ggtttcgcgg cagaccctcg
      901 atacgctggt gaggagacta tggaaaaaga acccacgcag gccaacgtcg atcgtatgtg
      961 gaagttcgct cgcacatttg cggagaagag cgggacggcc tttcatccga gtcctggggt
     1021 gacagaggtc gtcgtcaagg gattggcgct ccatcaggac gagctcggga agcccctctg
     1081 cccgtgcaat ttctaccctg ataaggcgga ggaggcgaag aaacgccgct ggatctgtgc
     1141 ctgcgacgaa atgcagacct ataagtactg ccactgcctg ttgtttgtgc gctcggatgg
     1201 ccttcccatt accgaatacc tccccgagga tcacgaggga cgccagatct atgggttggt
     1261 cacggatcca accccggaca agggtagggc gctccgccat aaagccggca aaccgtcgga
     1321 agagtagccg acggtagcat acgtacgcgc gtcgtacatg tagggcatgg cgatgcgttc
     1381 ggctggcgac ctccgtattg tgcggcgtcg tctgagttgt tgccgtggtc acagatgctg
     1441 tgtggcacta aggagtggct gtgggcctgg gaagccgctc tcgggtaggg cggaggtaag
     1501 ccagcccgta cgcaagagag cacagcacgt tgggcggtga
//
LOCUS       DASQSL010001201         2633 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_169232, whole genome shotgun sequence.
ACCESSION   DASQSL010001201 DASQSL010000000
VERSION     DASQSL010001201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2633
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169232"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            555..992
                     /locus_tag="VE844_12370"
     CDS             555..992
                     /locus_tag="VE844_12370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020559996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HZC02112.1"
                     /translation="MTVIHKSALVPYSAEQMYDLVNDVESYPKFLPWCADVQLLSKNR
                     ESLMATIVVSKGALKQAFTTMNAMEEGQRIEMSLVEGPFKYFKGLWRFDPLEAKGCEV
                     SFHLNFEFARGLIGLAFGRIFSQLANSLVDAFCQQAQERYGKP"
     gene            979..1296
                     /locus_tag="VE844_12375"
     CDS             979..1296
                     /locus_tag="VE844_12375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015259902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HZC02113.1"
                     /translation="MANPETIKVTLAYAKPEQQIVLPLKAPLGTTLGQAIAICGIMKR
                     FPEIDLLKNKTGVFGRLHPLEYILRPGDRVEIYRPLVADPKEVRRARVRGEGGPSKRT
                     TPK"
     gene            complement(1334..2431)
                     /locus_tag="VE844_12380"
     CDS             complement(1334..2431)
                     /locus_tag="VE844_12380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020159876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZC02114.1"
                     /translation="MRLQQTAPIPLAAAFHCAAGELVALIGPSGSGKTTVLRAIAGLY
                     EPQEGEIVCDREVWLDTQQQIRLSPQARRVGLVFQDYALFPHLSALENIVCGLGHLPP
                     GERQERARELLALVHLAGLEAQRPALLSGGQRQRVALARALAREPRVLLLDEPFSAVD
                     QVTRRKLERELALLRQRIHIPILLVTHDLDQAAALADRICVLYRGQTLQQGPPFEVMS
                     RPVSALVARLMDLGNIFQGMILEHRPASQLTRLSWLDYVLETRYRAEFPAKSRVSWVI
                     PASHIILHRRDRPSKGERENAVQGKIGELVYLGDTTLVTMWVNACEDTRLHFTLSTHV
                     AHRNGLEAGVRLTVSLLSEGIHLMPWTGDER"
     gene            complement(2467..>2633)
                     /locus_tag="VE844_12385"
     CDS             complement(2467..>2633)
                     /locus_tag="VE844_12385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015768609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HZC02115.1"
                     /translation="GGNIPGETRTISLAIYDRVQAFDETAAGAMSAVLLGFSLIAIGL
                     VYRFGDRAGR"
BASE COUNT          600 a          765 c          735 g          533 t
ORIGIN      
        1 ctagatagcg atgcagcttc acgtacactc gcccccatca gtgctaatca taactatctc
       61 aatcggtttt agctgtgaca tattcacatt ttttctgtga catattcaca ccctggagga
      121 gacctacaga acgctgggct aatctcattg ttcaatttgt gcaggcctaa ccaattatga
      181 tcgtatttcg ctcgcccctg agcatgaaag ccgggttgag ttatgtcacg atacggggtg
      241 ggagacggcg ggcgtgaggt cgcagtacgt ttggcggtca caccctctgg cctaaccgga
      301 cccgatacgg ccagttcgta ccccgggggc gaaatagggt cagatacgct gccgattgag
      361 tgatgggcct atttttagca caatgcgttt aaccctccac cccaaccggg ggagggaagg
      421 tatatacaca aataccacct cccccaccgg tggaggtagg gtgtgggcga tctggctcct
      481 cataaaagac ccgtaaaaga tttatgaaaa aatggggatc gctagaagtc cactgagggt
      541 gagggatttc gttcatgaca gttatccata agagtgccct ggtcccttat agtgccgagc
      601 agatgtatga tctcgtcaat gacgtcgagt cttatcctaa gtttctaccg tggtgtgcag
      661 acgtacagct gctctccaaa aacagggaaa gcctcatggc cactattgtg gtttccaagg
      721 gcgcgctcaa acaagccttt actaccatga atgctatgga ggagggccaa cgcattgaga
      781 tgagtctggt cgaaggcccg tttaaatatt tcaagggctt atggcgattt gatcccttag
      841 aggcaaaagg gtgcgaggtc tcatttcatc tcaactttga atttgccaga ggactgatcg
      901 gactcgcctt tgggaggatc tttagccaac tggccaactc gctggtggac gccttctgcc
      961 agcaggcgca agaacgttat ggcaaaccct gagaccatca aggtcacgct ggcttatgcc
     1021 aagcccgaac aacagatcgt gctgcccttg aaggctccgt tgggcaccac gctgggtcaa
     1081 gctatcgcga tctgcggaat aatgaaacgc ttccctgaga tcgatctgct aaagaacaag
     1141 acaggtgtgt tcggccggct tcatcccctg gagtacatat tgcgtcccgg ggatcgggtg
     1201 gagatctatc ggcccttagt cgctgatccc aaagaggtac gccgcgcccg agtcagaggt
     1261 gagggtgggc cttcaaagag aaccacaccg aaatgaccat ctatatcgat cagccagtat
     1321 tccttctttc ccttcatcgc tcatcccccg tccagggcat cagatgaata ccctcgctca
     1381 agagcgagac cgtgagccgc acgccggcct caagcccgtt gcggtgcgcc acatgggttg
     1441 agagggtgaa atgcaggcgc gtatcctcgc acgcgttcac ccacatcgtg accagtgtag
     1501 tgtcgccaag atacaccagt tcccctatct tcccttggac agcattctcg cgctcgccct
     1561 ttgaggggcg atcacggcgg tgcaggataa tgtgcgaggc agggatcacc caggagacgc
     1621 ggcttttggc cggaaactcc gcccgatagc gggtctccag cacgtaatcg agccacgaaa
     1681 gccgggtcaa ttgggaggcg ggccgatgtt ccaggatcat cccttgaaag atattgccga
     1741 ggtccataag gcgggcgacc aaggcgctca ccgggcggct catgacctca aatggtggcc
     1801 cctgctgcaa ggtctgcccc cggtataaca cacagatccg atcggcaagg gcagcggcct
     1861 gatcgagatc atgggtcacc aacaggatag ggatatggat ccgttggcgg agcaacgcca
     1921 attcccgctc gagtttgcgg cgcgtcacct gatcgaccgc agaaaaaggc tcatcgagca
     1981 gcagtacccg cggttcccgg gccaaggcac gggccagggc cactcgctgg cgctgtccgc
     2041 cggacaacag cgccggccgc tgcgcctcca agcccgccaa atggaccagt gctaaaagtt
     2101 ctcgggcccg ctcctgtcgc tctccgggcg gcagatggcc cagcccgcag acgatatttt
     2161 caagcgcgga gagatgtgga aacagggcgt aatcctgaaa cacgagaccc acgcgccgcg
     2221 cttgaggcga taagcggatc tgctgttgag tatcgagcca gacctcgcga tcacagacga
     2281 tctcgccctc ttggggctca taaagtccag cgatagcgcg caataccgtg gtcttgccgc
     2341 tacctgaggg cccgatcaac gccactaact ccccagcagc gcaatgaaac gctgcggcga
     2401 gcgggatcgg agccgtttgc tgcaggcgca cctgcaggca tccaccctcc tgatcagtca
     2461 ttactctcag cggcctgctc gatccccaaa ccggtacacc agaccgatcg ctatcaacga
     2521 gaaccccagc aacacggctg acatcgcccc ggcggccgtc tcgtcgaagg cctggacccg
     2581 atcatagatg gcaagcgaga tggtccgggt ctcaccgggg atattgccgc cca
//
LOCUS       DASQSL010001202         2174 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_196941, whole genome shotgun sequence.
ACCESSION   DASQSL010001202 DASQSL010000000
VERSION     DASQSL010001202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2174
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196941"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2073
                     /locus_tag="VE844_12390"
     rRNA            <1..2073
                     /locus_tag="VE844_12390"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          500 a          578 c          728 g          368 t
ORIGIN      
        1 ggttgaaggt gcggtaacac gcactggagg accgaaccca cgactgttgc aaaagtcggg
       61 gatgacctgt ggctaggggt gaaaggccaa tcaaactcgg aaatagctgg ttctccgcga
      121 aatctattga ggtagagcgt cgaaccgctc accgccgggg gtagagcact ggatgggcta
      181 ggggggcgcg agccttacca aacctaacca aactccgaat accggcgagt ggaggtcggc
      241 agccagacgg cgggtgctaa ggtccgtcgt cgagagggaa acagcccaga ccgccagcta
      301 aggtccccaa gtcgtggcta agtgggaaag gatgtaggac gaccaagaca accaggaggt
      361 tggcttagaa gcagccatcc tttaaagaaa gcgtaatagc tcactggtct agacaagttg
      421 tcccgcgccg aaaatgtaac ggggctaaag ccacgcaccg aagctgcggg tgttgggagc
      481 cgctggctcc cgacgcggta gcggagcgtt ccgtaggcct gcgaaggcgt gccgcgaggc
      541 atgctggagg tatcggaagt gcgaatgctg acatgagtag cgtcaatgcg ggtgagaaac
      601 ccgcacgccg aaagtccaag ggttcctgcg caaggttaat ccgcgcaggg ttagccggcc
      661 ccctaaggcg agggcgaaag ccgtagccga tgggaatggg gttaatactc cccagcctgc
      721 cggggcgcga cgaagtggat aagcgtgtcg tcccttatcg gattggggcg gctgcggacc
      781 gcttccagga aacagcgccg gcatcaaaga ccgtacccga aaccgacact ggtggactgg
      841 tagagcatac cgaggcgctt gagagaacgg tgttgaagga actcggcaaa ttgcccccgt
      901 aacttcggga gaagggggcc ccgtctctgg gcaaccaggg gcggggggca cagacgaggg
      961 ggtggcgact gtttactaaa aacacagggc tctgcgaagt cgaaagacga cgtatagggt
     1021 ctgacgcctg cccggtgccg gaaggttaag gggaggggtg caagccccga accgaagccc
     1081 cggtaaacgg cggccgtaac tataacggtc ctaaggtagc gaaattcctt gtcgggtaag
     1141 ttccgacctg cacgaatggc gtaacggttg ccccactgtc tccaacgccg gctcagcgaa
     1201 attgaattct ccgtgaagat gcggagtacc cgcggtcaga cggaaagacc ccgtgcacct
     1261 ttactacagc tttgcagtgg tgttagggat cgtatgtgta ggataggtgg gagccgatga
     1321 agccctggcg ccagttgggg tggaggcgtc cttgaaatac cacccttacg atctctgaca
     1381 tctaaccgcg gcccgtgaac ccgggtccgg gaccctgcat ggcgggtagt ttgactgggg
     1441 cggtcgcctc ccaaagagta acggaggcgc gcgatggtgg gctcgggctg gtcggaaatc
     1501 agccgctgag tgcaatggca taagcctgcc tgactgcgag gccgacgggc cgagcagaga
     1561 cgaaagtcgg tcatagtgat ccggtggtcc cgcgtggaag ggccatcgct caacggataa
     1621 aaggtacgcc ggggataaca ggctgatgat gcccaagagt ccatatcgac ggcatcgttt
     1681 ggcacctcga tgtcggctca tctcatcctg gggctggagc aggtcccaag ggtatggctg
     1741 ttcgccattt aaagaggtac gtgagctggg tttagaacgt cgtgagacag ttcggtccct
     1801 atctgccgtg ggtgtttgag acttgcgagg cgctttccct agtacgagag gaccgggaag
     1861 gacgcacctc tggtgtaccg gttgtggcgc cagccgcacc gccgggtagc tacgagcgga
     1921 cgggataacc gctgaaagca tctaagcggg aaaccctcct caaaaccagg tctcgccgag
     1981 agccgtggta gaccaccacg tcgataggcc ggaggtggaa gcggggcaac ccgcgcagcc
     2041 aaccggtact aatcgctcga tcgcgctgga gcgcccgcac ccagcggcaa ggatcatcct
     2101 tccggacgac aggcaaatcc ggaagcagta tctgacagat ggcagaccct tctccaaacg
     2161 gcggaacagc gttc
//
LOCUS       DASQSL010001203         1127 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_196943, whole genome shotgun sequence.
ACCESSION   DASQSL010001203 DASQSL010000000
VERSION     DASQSL010001203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1127
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196943"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            123..767
                     /locus_tag="VE844_12395"
     CDS             123..767
                     /locus_tag="VE844_12395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02116.1"
                     /translation="MPPIKAIPLTAPVAQILRDSHIVADLDHGGYLLTLPDVPDRKRQ
                     LEVKKALGLGGGVLRQKLGGYAFSTDPRLIFAQAFAPDAVGDEPVVEVPEPIEPIDEP
                     AVVAPEPVETPVMPTKSADASARATLVIHRREYPHPLACAEEPVMFEVRCRKDADDPG
                     RVILSYQTLEKAEQGRAWLMNGHDLCKHCQTRFRGHVTGDMSNGSIPASTGYAG"
BASE COUNT          254 a          334 c          319 g          220 t
ORIGIN      
        1 gcttagcaac catatcggtg ctatcaagct cttcgtatgc cattacaacc tgatgagagc
       61 tgcggcgtag agccagcatt acatggatac cactacccag aaacgagcta aggagcccca
      121 ccatgcctcc aatcaaagcc atccccctga ccgcccccgt cgcccaaatc ctccgcgaca
      181 gccacatcgt cgccgacctc gaccacggcg gctatctgct cacgctgccc gacgtccccg
      241 accgtaagcg ccagttggag gtcaagaagg cgctcggcct gggcggtggg gtgttgcgcc
      301 agaaactggg cggctacgcg ttctcgaccg acccgcgcct catcttcgcg caggcatttg
      361 cccccgatgc cgtgggagat gaaccggtgg tcgaggtgcc tgagcccatt gagcccatag
      421 atgagcctgc tgtggtggca ccggagcccg tcgagacgcc cgtcatgccc accaaatcag
      481 cagatgcctc cgcccgcgcc acgctcgtca tccaccgccg cgagtaccct cacccgctcg
      541 cctgcgccga ggagccggta atgttcgagg tgcgctgccg gaaggatgcg gatgatccgg
      601 ggcgcgtgat cctgagctat cagaccctgg agaaggctga gcaggggcgg gcatggctga
      661 tgaacggcca tgacctgtgc aagcactgcc aaacccggtt tcgtgggcat gtgacgggag
      721 acatgtcaaa tggaagcatc ccagcttcga caggttatgc tgggtaaact tcgggatcag
      781 acgttgccgc gagatgtctc attcaacacg atcacgaggg ctggcgagat cgtcattcgt
      841 gaagcacggg gagagccctg ctccatttgt ggagaggcaa ttcttccagg agaatacaca
      901 ttccatcgga tttagtggta aatctttaac gcattgatat tgctgatatt attttctgga
      961 aagttgcatg gtcgaggata gggtgtgcac ggaaaaccaa ggatcaagct gcccctgaca
     1021 gaagaggctc ctctgtctac cactaaatcc gatggaatgt gaaaaagacg accacagctc
     1081 ccaaaagcgt aaatgccttt attgcagcag gtacttttgt aggatcc
//
LOCUS       DASQSL010001204         3209 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_114452, whole genome shotgun sequence.
ACCESSION   DASQSL010001204 DASQSL010000000
VERSION     DASQSL010001204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3209
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114452"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            153..1778
                     /locus_tag="VE844_12400"
     CDS             153..1778
                     /locus_tag="VE844_12400"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02117.1"
                     /translation="MEHTRAAITQNLAERLCWQAARRDASRVARRLYRKQVVDGVYRL
                     DEGALLDDFFHFLHELGVVDWLNDVQGTAVQRVMVPCVQYILLYGLKTLYGVESMNAL
                     PALLFSDEALMRLVGFNAHQVRQGVCQRGAAKRQGPRTEGPICPDTLAANIVKLNLRD
                     LEALFNGVIRALAKTGAFAAKVTGIVDATDLETTPQYEGCGQVTRKRRITDKRGQVHE
                     IEVTVYGWKLIVLIDASTKIPLAGQVVPINAHEVLSMRALVTQARTNLAGSARLHKVV
                     FDRGFLDGPDLWWLDQHGILFVVPAKDNMAATVDAQAQAAAGEGVTVGRRAHTVRHGQ
                     GKTAWTERLETEVVGITGLTAYDQYGTSEHGRHHNRRDFQPNPINAVVVRKWHNRDYG
                     PGGKTVFLTNATVDKPLQPFDDYDDRSLIENCCIKESKQQWSLTHPPQKTARAVRVHV
                     MFTLLMFALATAYRLQCEQVEAGAEPIGWQRWRRQLLEQTRDMVIIFAEDCYGIFHIA
                     EYSLLLGVKLKDVPPGIGTRRDILAKYGLAAHG"
     gene            complement(1944..2684)
                     /locus_tag="VE844_12405"
     CDS             complement(1944..2684)
                     /locus_tag="VE844_12405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013032646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HZC02118.1"
                     /translation="MVIRDVCPRCQSPKFKKNGHIHNGKQNHHCHDCGRQFVESFEQY
                     LISDARRALIKRLLLERISLRGICRAVGVSLKWLLRFLVQCFEALPDHLHVQPVTCTQ
                     NVMIQRLDVEADEMSSFIQKKANKQWIWMAMDAQSRQVIAFHIGDRSRQSAKKLWAKI
                     PPAYCQQATFYTDQYVVYVGVIPPAQHRAISKLTRKTNHLERFNNTLRQRVSRLVREA
                     LSFSKKLANHSGAIKLFICHYNLTRAAA"
BASE COUNT          678 a          878 c          970 g          683 t
ORIGIN      
        1 cgaatttcat ctcgtcggca aacggctccg tgcggttgat ctgcaggcgg atcagcacaa
       61 tgcacccctg aagttccaat ataagggaaa gccttgatct gtggttcact ttcctctcta
      121 gcggagagac acgcgagaga ggaggggcga ccatggaaca cacccgggca gcaatcacac
      181 aaaacctggc ggagcgcttg tgttggcagg cggctcgccg cgatgcctcg cgggtagccc
      241 gtcgcctgta ccgcaaacag gtcgtcgacg gggtttaccg actggacgaa ggggcgttgc
      301 tggatgattt cttccacttc ctgcacgagc tgggagtcgt cgactggctg aacgatgtcc
      361 agggaacggc ggtgcagcgg gtgatggtgc catgcgtgca atatatcttg ctctatgggc
      421 tgaagaccct gtacggcgtg gagagcatga atgccctacc ggccttgctg ttcagcgatg
      481 aggccctgat gcggttggtg ggcttcaacg cccaccaggt gcggcaggga gtctgccagc
      541 gaggcgccgc caaacgccag ggaccgcgca cggaggggcc catctgccca gacacgttgg
      601 cggcaaacat cgtcaagctg aatctgcgcg atttggaggc cctgttcaat ggcgtcattc
      661 gggcgctggc caagactggg gcctttgccg ccaaggtgac cgggattgtc gatgccaccg
      721 atctggagac gacgccccag tatgaaggct gtggccaagt cacccgtaag cggaggatca
      781 ccgacaagcg cggccaggtg catgagatcg aggtcaccgt ctatggctgg aaactgatcg
      841 tcttgatcga cgcctctacc aagattccct tggccgggca ggtggtgccc atcaatgcgc
      901 atgaagtgct ctccatgcgg gcgctggtca cccaggcgcg taccaatctg gcgggctctg
      961 cccgcctgca caaagtggtc tttgataggg ggtttttgga tggccccgat ctgtggtggc
     1021 tggaccaaca cggcatcctc tttgtcgtgc cggccaagga caacatggcg gccacggtgg
     1081 atgcccaggc tcaagccgct gcgggcgaag gcgtgaccgt cgggcgccgg gcgcacacgg
     1141 tgcggcatgg acagggcaaa accgcctgga ctgagcggct ggagacggag gtcgtgggga
     1201 tcaccgggct gacggcctat gatcagtatg ggacctctga gcacgggcgc caccataacc
     1261 gccgtgactt ccagcccaac cccatcaacg ccgtggtggt gcgcaagtgg cacaatcggg
     1321 actatggccc cggggggaaa accgtctttc tgaccaacgc cacggtggac aagcccttgc
     1381 agccctttga tgattatgat gaccgcagtc tcatcgagaa ttgctgtatt aaagaaagta
     1441 agcagcagtg gagtttgacg catccgcccc agaaaaccgc gagggcggtg cgcgtgcacg
     1501 ttatgtttac cttgctgatg ttcgccctgg ccacggcgta tcggctgcag tgcgagcaag
     1561 tggaagcggg agctgagccc atcggttggc agcgctggcg gcgccaactc ctggagcaga
     1621 ccagggatat ggtcatcatc tttgctgagg actgctacgg catctttcat atcgccgagt
     1681 actcgctgtt gttgggcgtc aaactcaaag acgtaccgcc aggcatcggc acacgccggg
     1741 acattctcgc gaagtatggg ctcgcagcgc atggctgagc ttatatcgga atctcagagg
     1801 gtagtgtttc agatctggac tttcactggc atgtgtgcca tgctgatgcg ctcttctgaa
     1861 aggcaatgct gaaggggaat gcaatggtac tcatgccagt tctttgtcct tactgtggta
     1921 gtgctatcca tgtaatgctc gctctatgcc gcagctctcg tgaggttgta gtggcagatg
     1981 aagagcttga tagcaccgct atgattcgcg agcttcttgg aaaacgacaa cgcctcacgt
     2041 accaagcgtg acacgcgctg ccgtagggtg ttgttgaacc gctcgaggtg attagttttc
     2101 cgcgtcaatt tgctgatcgc gcggtgttgg gcaggcggaa tcacccctac gtacaccaca
     2161 tactgatcgg tgtaaaacgt cgcctgctga cagtacgcgg gaggaatctt cgcccataat
     2221 tttttcgcgc tctggcgact acgatcgccg atgtggaagg caatcacctg gcggctctgg
     2281 gcgtccatgg ccatccagat ccactgcttg ttggctttct tctggatgaa gctgctcatt
     2341 tcatccgctt cgacgtccag gcgttggatc atcacgttct gtgtgcaggt gacaggttgg
     2401 acatggagat gatcaggcaa ggcctcaaag cattggacca gaaaccttaa gagccacttg
     2461 agtgagacac ccaccgcgcg acaaataccg cgcaacgaaa tccgttccag cagcaagcgt
     2521 ttgataagag cccgtctagc atcagagatg agatattgct cgaagctctc gacaaattgg
     2581 cgtccacagt cgtggcagtg atgattttgt ttgccgttgt gaatatgccc gtttttctta
     2641 aacttggggg actggcaccg tggacagacg tctcggatga ccatggcgtg ctgttgacct
     2701 ccgcgggatg gagacgcgtt tttggtcaac catagcacag catcgtcagc ccagcattac
     2761 atggagtgca ctaccgtcgg gcgggcgtca gcgcagagct ggcggggatc cacatggttg
     2821 tgaacacgcc tatcgtcagc aggagccagt ggaatagcat aagcgctctc ctagacattg
     2881 agcaggctgt ttcgcatcgg cggtatctca tggcagatcg gttgacagca cgcaccagac
     2941 acacgtgatc caccgaacgg tgaccactga gatcgtcaag accacccgct cggcagtgca
     3001 acagggttga attttagctt ttactacgag ctatccggct ttgttgacat cctcaagaat
     3061 tcggtttacg cacgaactcc gtcttacacc agcatgttcc tataaatcaa ggagaaagtg
     3121 tccagttggc tgcaccgata gtcccaaccc catgtcaagc agggaccgcg ctttcatggc
     3181 gtcagagatt ggctacggcg acttaacca
//
LOCUS       DASQSL010001205         1208 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_62476, whole genome shotgun sequence.
ACCESSION   DASQSL010001205 DASQSL010000000
VERSION     DASQSL010001205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1208
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62476"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1081)
                     /locus_tag="VE844_12410"
     CDS             complement(<1..1081)
                     /locus_tag="VE844_12410"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HZC02119.1"
                     /translation="MNTRVAASLSQEEQHYRSLTPTSYKHFLEGRKYLPGADSRSPLF
                     YTPYPVVLEEGHGCWLFDVDGNKLLDFTGNHTSLIFGYGHPQVLDAVQRQLEKGTAFP
                     GVTVPQVRLAKLLCERVPSFEQVRFTNSGTEAAMNSIRAARAFTGRHKIAKIEGGYNG
                     SWDDVMVSTHPSGEQAGDVLRPVAAPASLGLTPDSIDNVVVLPFNEVEAAARLIEQQG
                     EHLAAVIVEPVLGSAGMIPVEQSYLDMLREMTKRLGILLVFDEVVSFRVAYGGAQEYY
                     GVSPDLTCLGKLIGGGFPLGVFGGRSDVMAMFDPSHGKPQIPHPGSYNANPISLVAGA
                     TTLGLLTGEEIQRLNLRGESLRRQIR"
BASE COUNT          256 a          355 c          345 g          252 t
ORIGIN      
        1 tacgtatctg gcgccgcaag gattcgcccc gaaggttcag acgctggatc tcttcgcccg
       61 tgagcaaccc gagggtggtc gcgccggcca ccaaacttat agggttggcg ttgtagctac
      121 cggggtgcgg gatctgtggc ttgccgtgcg agggatcgaa catcgccatg acatcgcttc
      181 ttcccccgaa tacgccaagc ggaaagccac cgccgatgag tttcccgaga caggtcagat
      241 ccggggatac accatagtat tcctgcgcgc ccccgtatgc gaccctgaag ctgacgactt
      301 catcgaagac gaggagtatt ccaagccgtt tggtcatctc gcgcagcatg tcgagatagc
      361 tctgctcgac agggatcatg ccggcagagc ccaagaccgg ctccacgatg acggctgcca
      421 ggtgctcacc ttgttgttcg atcagccgtg ccgctgcctc cacctcgtta aacggcagca
      481 ccaccacgtt gtcgatgcta tccggggtga gacccaggga cgctggagcc gcaaccggtc
      541 gtaatacgtc tcctgcttgc tcacccgatg ggtgcgtgct caccatcaca tcgtcccaac
      601 tcccgttgta gcccccctcg atcttggcga tcttgtgccg tcccgtgaat gctcgggcgg
      661 cgcgaataga gttcatcgcc gcctcggtac ctgagtttgt gaagcggacc tgctcaaaag
      721 atggcacgcg ttcgcacagt aacttggcca gccgcacctg aggcaccgtg actccgggga
      781 atgcagttcc cttttccagt tggcgctgga ccgcgtcgag aacctgagga tgcccatatc
      841 cgaagatcag agatgtgtgg ttgccggtga aatcgagcag cttgttgcca tctacatcga
      901 acaaccagca accgtgacct tcttccagga cgacaggata aggagtatag aagagaggac
      961 tgcgagagtc ggcgccggga agatacttgc ggccctccag aaagtgtttg taagaggtcg
     1021 gggtcaggct acgatagtgc tgttcctctt gggataggga agctgctacc cgagtattca
     1081 ttcagatcct ctcatagcag gaactatacc tttgccgcaa ctgccatgcc ggctcatcga
     1141 gcatcagcct gaaaaagctg catcagcgaa acaggtcgac gatcctttct agggtttcgt
     1201 caaggaga
//
LOCUS       DASQSL010001206         1182 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_130930, whole genome shotgun sequence.
ACCESSION   DASQSL010001206 DASQSL010000000
VERSION     DASQSL010001206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1182
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130930"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(56..861)
                     /locus_tag="VE844_12415"
     CDS             complement(join(56..516,516..861))
                     /locus_tag="VE844_12415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011020875.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZC02120.1"
                     /translation="MSPRLPYPTDLTDHEWALIEPYVPQAKRGGRPEQYPKREILNGI
                     FYIVRGGCAWRLLPHDFPPWQIVYHSFWIWRQDGTWPLMHDLLRGDVRVATGKQRQPS
                     AGIIDSQSVKTTEKRGIRGFDTYKQIKGRKRHIFVDTLGLLLTVVVTAANVQDRDGAR
                     LLLEGLRQQFSRLRRIWADGAYGGDLIAWVWALRPRRKVCLEIVRRPKGVQGFQLLPW
                     RWIVERTFGWLGRYRRLSKDYEYLTQTSEAMIRVAMIHLMVRRLARLTSF"
BASE COUNT          268 a          342 c          312 g          260 t
ORIGIN      
        1 aagaagttac ctaccttcgc aacgcaaaag ggcaaaagtc gagctaagag ggtgtttaaa
       61 aacttgtcag acgagccagg cgacggacca tgagatggat catcgccaca cggatcatgg
      121 cctcgctcgt ctgggttaag tactcataat ctttggataa tcggcggtaa cggcccaacc
      181 agccgaaagt ccgctccacg atccaacgcc acgggagtag ctggaaaccc tggacgcctt
      241 tgggccgcct gacaatctcc aagcagactt ttcgccgggg ccgcagggcc cacacccacg
      301 cgatgaggtc tccaccatag gccccatcgg cccagatgcg ccgcaaccgg gaaaactgct
      361 gccggaggcc ctccaacagc agcctcgcac cgtcgcggtc ttgcacattg gcggccgtga
      421 ccaccacagt caggagtaac cccagggtat cgacgaagat gtggcgtttg cggcctttga
      481 tctgtttgta cgtgtcaaag ccacggatcc ccctttttcg gtggtcttga ccgattggct
      541 gtcgatgatc cccgcgctgg gttggcgttg cttgcctgtg gccacccgca catcaccccg
      601 caagagatcg tgcatgagtg gccaggtccc gtcttggcgc cagatccaaa aggagtgata
      661 gacaatctgc cacggcggga agtcatgcgg taacagccgc caggcacagc cgccccgcac
      721 gatataaaag atgccgttga ggatttcccg cttggggtat tgctccggtc gtccgccccg
      781 tttggcttgg ggcacgtacg gttcaatcaa cgcccattca tggtccgtga gatcggttgg
      841 gtatggtagt cgggggctca ttcctcgatt gtaccccaag ttcctcacgc atgacgaagt
      901 ttttaaacac cctcagagct cgacttttgc cctttttgcg ttgcgaaggt aggtaacttc
      961 ttgtggagtc acactttctc gccctcagct atgcaagcat gttgcttata taaatcgctg
     1021 catttgtaga tacttacgga aaaagggcaa aagtccacct tagaaagtcc cccgcttgct
     1081 atcacctcgg ctccccaaga gaaataatct ctttacctga agagtgaagg ctaagtcaac
     1141 tgcaaaatat gtccctagcc tagtctcgca gttagatgtg aa
//
LOCUS       DASQSL010001207         1865 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_89420, whole genome shotgun sequence.
ACCESSION   DASQSL010001207 DASQSL010000000
VERSION     DASQSL010001207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1865)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1865)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1865
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89420"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..173)
                     /locus_tag="VE844_12420"
     CDS             complement(<1..173)
                     /locus_tag="VE844_12420"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HZC02121.1"
                     /translation="MGEPTRWQRRVEEFVLGQIGDPPARVLEVGCGKGELARSLAHAG
                     HCVTAIDPRAPEGP"
     gene            complement(378..1244)
                     /locus_tag="VE844_12425"
     CDS             complement(378..1244)
                     /locus_tag="VE844_12425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015160383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC N-terminal beta barrel domain-containing
                     protein"
                     /protein_id="HZC02122.1"
                     /translation="MPNATQNNLGSVVSLWRYPVKSMMGEELNATEVTQRGLLGDRAY
                     ALVDSSNEKVASAKNPRKWAKLFDFRAALADPLHTGEKIPPVNVALPDGTIVSSEQTD
                     TNQMLSNVLGREVTLETREPGQPEIVETTLPNPWTPSLEEYWPDMEDLAHRDTITNEA
                     MPEGTFFDLAVIHILTTATIDRLRELYPQGRFEVRRFRPNIVVEPSSGEEGFVEDDWI
                     GKTLVIGDEVRIDITEPCPRCVMTTLPQGDLPKDPGILRTAAQHNQVNVGVYGAVQRG
                     GTIRRGDPAKVE"
     gene            complement(1286..1711)
                     /locus_tag="VE844_12430"
     CDS             complement(1286..1711)
                     /locus_tag="VE844_12430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008477548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group 1 truncated hemoglobin"
                     /protein_id="HZC02123.1"
                     /translation="MHDQAKPTLYDRLGGVYNIAPVVDDLIDRVMGDPRLNANPNVDE
                     AHHRVSAAGFKYFVTELVCREAGGPQTYSGRSMGDSHRHLMITDEEWLAFMDDLQKAV
                     DKFEVPQLEQEELKAIVESTKEAIVVEPLQEEPVAPREP"
BASE COUNT          374 a          550 c          508 g          433 t
ORIGIN      
        1 ggaccttcgg gtgcccgcgg gtcgatcgcg gtcacgcagt ggccggcatg cgcgagagac
       61 cgggccaact cccccttccc gcaaccgact tctagcaccc gggcaggagg gtcaccgatc
      121 tggccgagga cgaactcctc gacacgccgc tgccacctgg tgggctcacc catgatactg
      181 ggggctcacc ctagaaaaga tggcgacgta cgcggcgcgg ttcaccgtcg gactattctc
      241 ccatgaaggg gcaagttccg agaaacccct acacgcgaag ttcgcagaat acctcttcca
      301 cttgggtgaa taagggcggg aggaagtgcc gggcgtctac accatggcac tcttgaatag
      361 tagggtcacg tttggcatta ctcgaccttg gccggatcac cacggcggat cgtgccgccc
      421 cgctgcactg caccatagac tccgacattg acctgattgt gctgagccgc tgtgcgcagg
      481 atacccggat ctttaggtaa gtcaccctgc ggcagggtcg tcatcacaca acgtgggcaa
      541 ggctcagtga tatcgatgcg gacctcatct ccgatcacta gcgtcttgcc tatccagtca
      601 tcttcaacga agccttcctc gccagagcta ggctccacta cgatattcgg tcgaaatctt
      661 cgcacctcga accgtccttg cggatagagt tcccgcagtc ggtcaatcgt ggcggtcgtc
      721 agtatgtgga tgactgcaag atcgaagaat gtaccttcag gcatcgcttc gttagtgatc
      781 gtgtccctgt gggcgaggtc ctccatgtct ggccagtact cttcgaggct gggcgtccag
      841 ggattgggca atgttgtttc aactatctcc ggctggcctg gctcgcgtgt ctccagggtc
      901 acctcgcggc ctagcacgtt tgagagcatt tggttggtgt cggtctgctc gctgctgact
      961 atggtgccgt ccgggagtgc gacgttgacc ggagggatct tctcgccagt gtggagagga
     1021 tcggcgagag cagcccgaaa gtcgaagagc ttcgcccatt ttcggggatt tttggcgctg
     1081 gcgaccttct cattggacga atccaccagg gcgtaagcac gatccccaag cagcccgcgt
     1141 tgtgtgactt cggtggcgtt gagttcttct cccatcatgg atttgacagg atagcgccat
     1201 agagaaacca ccgaaccaag attgttctgc gttgcgtttg gcatcagcac acccatctag
     1261 caacttcggt gaatacgcgt cggacctacg gttctcgagg tgccaccggc tcttcttgca
     1321 agggctctac tactatagct tcctttgtac tctccactat agccttcaat tcttcctgct
     1381 ctagctgtgg tacttcaaat ttatccactg ccttctgcaa gtcatccatg aacgccagcc
     1441 actcttcgtc ggtgatcatt agatgccgat gagaatcgcc catcgaacga ccggaatatg
     1501 tctgcgggcc gccagcctcc cgacagacca gctccgtgac gaaatacttg aatcctgcag
     1561 ctgacactct atggtgggct tcatccacat tagggtttgc attcaacctt gggtcaccca
     1621 taaccctatc gatgaggtca tcaacaacgg gggcgatgtt atagacgcct ccgagcctat
     1681 cgtagagggt tggcttcgct tgatcgtgca tattttctcc ttcccagccc gcttgcccta
     1741 acgggggctg accctttcca ccgcgaaaca cgttagcaga aaatgtagca agaacgctct
     1801 aggcaatatg tcccgcgaac ttcgcagaat tcctgttcta cgcagtcggg tgaatagggc
     1861 cagtg
//
LOCUS       DASQSL010001208         3762 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_89422, whole genome shotgun sequence.
ACCESSION   DASQSL010001208 DASQSL010000000
VERSION     DASQSL010001208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3762)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3762)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3762
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89422"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            79..633
                     /gene="hslV"
                     /locus_tag="VE844_12435"
     CDS             79..633
                     /gene="hslV"
                     /locus_tag="VE844_12435"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007192441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HZC02124.1"
                     /translation="MEPFIGTTILSVRRYGAVVIGGDGQVSFGNTVLKGNARKVRRLY
                     NNKVLAGFAGATADAFTLFERFEAKLEKHQGNLSRSAVELAKDWRTDRALRRLEAMLV
                     VADNIASLIISGTGDVIEPESDLMAIGSGGPYARAAARALLEHTEMDARSIVETGLRI
                     AAEICIYTNPNLTIEELRMSEDGR"
     gene            653..1987
                     /gene="hslU"
                     /locus_tag="VE844_12440"
     CDS             653..1987
                     /gene="hslU"
                     /locus_tag="VE844_12440"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010961260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HZC02125.1"
                     /translation="MSELTPRQIVQELDKHIIGQDAAKRAVAIALRNRWRRAQVALGL
                     RNEITPKNILMIGPTGVGKTEIARRLAKLAQAPFIKVEATKFTEIGYVGRDVESIVRD
                     LADVAVKMIREEAVAKVQHQAEQAAEERVLDILLPTARPTGMDFDLSEGSSPTREKFR
                     QMLREGKLDGKEIEAELSVPAIGVEIMAPPGMEEMTSQLQGMFQNLAGGRKRTRKVRV
                     KEARKLLAEEEAGKLINEEDIKAKALEAAEQHGIVFIDEIDKVARRSEYSGPDVSREG
                     VQRDLLPLVEGCTVSTKYGMVRTDYILFIASGAFHLSKPSDLIPEMQGRLPIRVELNA
                     LTVEDFVRILTEPDASLTEQYTALMATEGVGLKFTESGIARIAEVAWQVNQRTENIGA
                     RRLHTVMERLLEQLSFAAGSGEEIDTVAIDAAYVDTYLGELIKDEDLTRYIL"
     gene            1996..2379
                     /locus_tag="VE844_12445"
     CDS             1996..2379
                     /locus_tag="VE844_12445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019625223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HZC02126.1"
                     /translation="MPQSGSYKPVPTEITLHQQSRILEIRFDDGERFELPCEILRVYS
                     PSAEVKGHGPGQGVLPIGKEGVNITAIESVGNYAVKLIFDDGHATGIYSWGYLHDLGK
                     RLDRYWMDYLDALKQAGYQRRSVAS"
     gene            2376..3119
                     /gene="ubiE"
                     /locus_tag="VE844_12450"
     CDS             2376..3119
                     /gene="ubiE"
                     /locus_tag="VE844_12450"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008930785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HZC02127.1"
                     /translation="MTKTTDFGYQRIPVEQKTRRVGQVFDSVAARYDLMNDLMSWGIH
                     RLWKQFAVAIASIKRGQRVLDLAGGTGDMTARLARRVGSAGSVVLADINGSMLSIGRD
                     RLIDQGIAGTVQYVQANAESLPFPDNTFDVVTIAFGLRNVTHKDQSLASMHRVLQPGG
                     RVVILEFSQLVMPLLQRLYDSYSFNVLPWLGKLVVGDAESYRYLLESIRRHPDQKTLK
                     SMMESAGFDLIAYHNLSGGIAAVHCGYKL"
     gene            3128..>3762
                     /locus_tag="VE844_12455"
     CDS             3128..>3762
                     /locus_tag="VE844_12455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 sterol-binding domain-containing protein"
                     /protein_id="HZC02128.1"
                     /translation="MPTLLMNPGIKPPLTLLLSLIETTIAKLLRFDPAVRESVGDMAG
                     KVVAVELRGFLDRIIYALPERETLRLTLDHAGEVHLRIRGTPLALMAMAMAPDKRASA
                     LAGDIEIIGDLALSHQVQACLAALDIDWEEVLSYYLGDIPAHQLGRAYRASASWLEQS
                     RETLELDLTEYLKTEIAILPDQDDVNGFIEAVDRLRTDVDRLEARLKRLER"
BASE COUNT          794 a          987 c         1158 g          823 t
ORIGIN      
        1 gccatcaaaa tggaagctgt ctctcgggcg gatgtggtat acaataattt tattacttta
       61 ttttgaagga tcatctgggt ggagccattt ataggtacaa ctattctctc tgtccgccgc
      121 tatggcgctg ttgtcattgg cggcgacggg caggtatcat ttggcaatac cgtgcttaaa
      181 ggtaacgccc gtaaggttcg gcgcttgtat aacaacaagg tgctcgccgg tttcgctggc
      241 gccaccgcgg atgcctttac cttgtttgag cgtttcgagg caaaattgga aaaacaccag
      301 ggcaatctca gccgctcggc ggtggagctc gctaaggatt ggcgtacgga ccgggcctta
      361 cgccgcctgg aagcgatgct ggtagtggcc gataacatcg cttctctcat catctccggt
      421 acgggtgatg tcatcgagcc ggaaagcgat ctgatggcga tcggctcggg cggaccctat
      481 gctcgggcag cggcgcgggc tttgctcgaa catacggaaa tggatgcgcg gtccatcgtg
      541 gaaacgggct tgaggatcgc cgcggagatc tgtatttaca ccaatccaaa tctgacgatt
      601 gaggagttga ggatgagcga ggatggccga taatctatcc gcaaagccga ccatgagtga
      661 gctgacgcca cgccagattg ttcaagagct cgataagcat atcatcgggc aagacgctgc
      721 caagcgggcg gtcgccattg ctttgcgcaa ccgctggcgg cgcgcccaag tggccttggg
      781 tctgcgcaat gagatcacac ccaagaatat cctgatgatt ggcccgaccg gcgtgggtaa
      841 aaccgagatc gccaggcgcc tggccaagct tgcccaggcg ccatttatca aggtggaggc
      901 caccaagttt accgagatcg gttatgtcgg ccgcgatgtc gaatccatcg ttcgggatct
      961 ggcggatgtc gccgtcaaga tgatccgtga agaggccgtg gcgaaggtcc agcatcaggc
     1021 cgaacaagcc gccgaggagc gggtgctgga tatattgttg cccacggcca ggccgaccgg
     1081 tatggacttt gatttgtcgg aaggcagttc tcccacccgg gagaagtttc gccagatgtt
     1141 gcgggagggt aagctcgatg gtaaggagat tgaggcggaa ctcagtgtgc ctgcgatcgg
     1201 ggtcgagatc atggccccac ccggtatgga ggagatgacc tcccagttgc agggtatgtt
     1261 tcagaacttg gcgggtggtc gcaagcggac ccgtaaggtg cgggtcaagg aggcgcgcaa
     1321 gctcttggcc gaggaggagg cgggtaaact catcaacgag gaagacatca aggccaaagc
     1381 actcgaagcg gcagagcaac acggcatcgt tttcatcgac gagatcgata aagtcgcgcg
     1441 ccgctcggag tatagcggcc cggatgtttc ccgggaaggc gtacagcggg atctgttgcc
     1501 tttggtcgaa ggctgtacgg tatccaccaa atacgggatg gtgagaacgg attatatcct
     1561 gtttatcgcc tcaggggcct ttcacctttc caaaccctcc gatctgatcc cagagatgca
     1621 aggtcgctta cccatccggg ttgaattgaa tgccctgacc gtcgaggatt ttgtcaggat
     1681 cttaaccgag cccgatgcct ctctcaccga gcaatatacg gccttgatgg cgaccgaggg
     1741 cgtgggctta aaattcaccg aatcgggcat cgcccggatc gccgaggtgg cctggcaggt
     1801 caaccagcgc accgaaaaca tcggcgctcg gcggctgcat accgtgatgg agcgcttgct
     1861 tgaacagtta tcattcgcgg cgggcagcgg cgaggagatc gacacggtgg cgatcgatgc
     1921 cgcctatgtg gatacctatc tcggcgagtt gatcaaggat gaagatctga ccagatatat
     1981 tctctaagcg gccgtatgcc acagtccggg tcttacaagc ctgtcccgac cgagatcacg
     2041 ctccatcagc aatcgcgtat cctcgagatc cgcttcgacg atggcgagcg gtttgaattg
     2101 ccgtgtgaga tcttgcgcgt gtattcgcct tccgccgagg tcaaaggcca tggccctggc
     2161 caaggggtgc tgccgatcgg caaggagggg gtcaatatca cggcgattga gtcggtgggc
     2221 aactatgctg ttaaattgat cttcgatgac gggcatgcga ccgggatcta ttcctgggga
     2281 tacctccatg atctcggcaa gcgtctggat cgctactgga tggattatct cgatgcctta
     2341 aaacaggcgg gataccagcg tagatcggtt gcctcatgac caaaaccacc gattttggct
     2401 atcagcggat cccggtagaa cagaagaccc gccgcgtagg ccaggtgttc gactcggtcg
     2461 ccgcccgcta tgatctcatg aacgatctga tgtcctgggg cattcaccgt ctttggaaac
     2521 agttcgccgt ggctatcgct agcatcaaac gcgggcagcg ggttttggat ctggccggcg
     2581 gcaccgggga tatgaccgca cgcctcgctc gccgggtggg atcagcgggc tctgtggtct
     2641 tggccgatat caatgggtcg atgttgagta tcggccgaga tcgcttgatc gatcagggga
     2701 tcgccggcac cgtgcagtat gtgcaggcaa atgccgaatc cctaccgttc ccggacaata
     2761 ccttcgatgt agttaccatc gcctttggtt tgcgcaatgt gacccataaa gaccaatcgc
     2821 tggcctccat gcaccgggtg ttgcagcctg gggggagggt ggtgatctta gagttttcgc
     2881 agctcgtgat gccgctactg cagcgcctct acgatagcta ttcattcaat gtgctcccat
     2941 ggcttggaaa gcttgtcgtg ggtgatgcgg agagttatcg gtacctgctc gaatcgatcc
     3001 gcaggcaccc ggatcagaag accctgaaga gcatgatgga gagcgctggc ttcgatttga
     3061 tcgcctatca taatctgagc ggtgggatcg ccgccgtaca ctgcggatat aagctttaac
     3121 aagagggttg cccacactac ttatgaaccc cgggatcaaa ccacccctca ccttgctatt
     3181 gtccttaatc gaaacgacga tcgccaagct gttgcgattt gatcccgctg ttcgggagag
     3241 cgttggggat atggccggca aggtagtcgc cgtcgagctt cggggcttcc tcgataggat
     3301 tatttatgct ctgccggaac gggaaacctt gcgcttgacc ctggatcacg caggtgaggt
     3361 gcacctgcgg atccggggta cgccgctcgc cttgatggct atggctatgg cccccgacaa
     3421 gcgcgcctcg gccctagcgg gagatatcga gatcatcggc gatctggcct tgagccacca
     3481 ggttcaagcg tgcctggccg ctcttgatat cgactgggaa gaggtgctgt cgtattacct
     3541 cggtgatatt cctgcgcatc agttgggcag ggcgtatcgg gcctcggcga gctggttgga
     3601 acagagccgt gagaccctgg aactcgacct taccgagtat cttaagacag agatcgctat
     3661 tctgcccgac caagacgatg tcaacgggtt tattgaggct gtagataggt tgcgcaccga
     3721 tgtggatcgg ctcgaggcgc ggttaaaacg gctcgagagg ca
//
LOCUS       DASQSL010001209         2630 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_169244, whole genome shotgun sequence.
ACCESSION   DASQSL010001209 DASQSL010000000
VERSION     DASQSL010001209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2630
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169244"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(48..>2630)
                     /locus_tag="VE844_12460"
     CDS             complement(48..>2630)
                     /locus_tag="VE844_12460"
                     /inference="COORDINATES: protein motif:HMM:NF019966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HZC02129.1"
                     /translation="DFHNLLQVYLDAVFFPQLDALDFAQEGHHVEFVVPSDPATDLVY
                     KGVVYNEMKGAMSAPTARLWQALSAELFPTTTYHYNSGGEPEAIPTLTYAQLKAFHAK
                     HYHPSNAFFATYGDLDVTEHQAHFHEWALSYFAARSLDLSIPDERRYTAPRSVVLPYA
                     LDGQEDTRDKTHIVLGWLWGKTLDPKEIMAAHLLAGVLLNHSASPLRRALETSPYGAA
                     PSELCGLETTNREALFVCGLEGSNPEQTETVERLVLGVIQEVAERGVPKGMADSVLHQ
                     MELAQREIRGGHYPYGLQLLGATIPMALHGGDPIAAIHLDPVLEDLRSAIERPDFIRG
                     LARRWLLENPHRVRLVMVPDKALSLRQAQATRARLAQLKASMSAEDRAHVVQQAAALQ
                     ARQNQQDDPDILPKVGLEDVPADLKIPEGRTDRVQDRPLIWFSQGTNRLVYQNIVVEL
                     PAFAPEQVELLDLYCNCLTEVGCGERDYLATQAWQAAVSGGISAECSVCATVSELQAI
                     HALLRLGANGLVRNQEALTRLLHETFKYARFDELSRLRELIAQMRAARESGVTDQGHL
                     LAMLAACAGFGPAASLHHQWDGLLGLKRLKALDEAIEDEASLAECADQLAKIHKQLIA
                     APYQLVVVSEARYQDEIGSALNKIWREDNPPRIDSSKFQPRPVAKVVNQAWVTSTEVN
                     FCAQAYLTVPADHPDAPALMVLGRFLQNGYLHRAIREQGGAYGSGASYDANTGAFRFY
                     SYRDPRLAETLEDFSESLRWLQRHPHEYRALEEAILGVISAIDRPSSPAGEAIKTFMA
                     SLNGRTPDYRRRLRQHVLGVTLEDLKRVAATHLVAKPVSTAVVTDRRTIEKYHSLDLE
                     VLVL"
BASE COUNT          567 a          765 c          762 g          536 t
ORIGIN      
        1 atacagtgcc tctaaccaag acttgagaga agttcgcact ttatttctta tagtaccagg
       61 acctcaagat caagggagtg atatttttcg atcgtcctcc tatcagtgac cacggccgtg
      121 ctgacaggct ttgcaaccag atgggttgca gccacacgtt tgagatcctc gagcgtgacc
      181 ccgagcacgt gctggcgcag acggcgccta tagtcggggg tgcgcccgtt gaggctagcc
      241 atgaaggtct tgatagcctc acccgccggg gaactcgggc gatcgatcgc gctgatgacc
      301 ccgaggatcg cttcttccaa tgcgcgatat tcatggggat gacgttgtaa ccagcgcagc
      361 gattcggaga aatcctccaa ggtctcggcc aggcgggggt cacggtagga ataaaaccgg
      421 aacgcacccg tatttgcatc ataacttgca ccggagccat aggccccgcc ttgttcccgg
      481 atagcgcgat gcagataacc gttttgcagg aaacgcccaa gcaccatcaa ggcgggcgca
      541 tccgggtggt cagccggcac ggtgaggtag gcttgtgcgc agaagttgac ctcggtgctg
      601 gtaacccagg cctgattgac aaccttagcc acgggtcgtg gttgaaactt ggatgaatct
      661 atcctgggcg ggttatcctc ccgccagatc ttattcaagg ccgagccaat ctcatcttga
      721 tagcgcgctt cgctgacgac cactaactgg tagggcgctg cgatcaactg cttatggatc
      781 ttggcaagct gatcggcaca ttcagcgagg cttgcctcgt cttcgatagc ctcatccagc
      841 gccttgagtc gcttaagacc cagtagccca tcccattgat gatggaggga ggcggcgggt
      901 ccaaagccgg cacaggctgc cagcatggcg agcaggtgac cttggtcggt gacccccgac
      961 tctcgggccg cccgcatctg cgctatcaat tcccgcagcc gcgacaattc atcaaagcgc
     1021 gcatatttaa aggtttcgtg cagcaagcgg gtaagcgcct cttgattccg taccagaccg
     1081 ttcgctccaa gccttaacaa ggcatggatc gcctgaagct cactgaccgt agcgcaaacg
     1141 ctacactcgg cactgatccc accgctcacg gcggcctgcc acgcttgtgt cgccaagtaa
     1201 tcgcgctcgc cacagccgac ctccgtcagg cagttgcaat aaagatcaag gagctccacc
     1261 tgctctggcg caaacgcggg caattctacg acaatatttt gatagaccaa gcggttggtt
     1321 ccctggctaa accagatgag aggccgatcc tgtacccgat ccgtgcggcc ttccgggatc
     1381 ttgagatcgg cgggcacatc ttcaagccca accttgggga ggatgtcagg atcatcctgt
     1441 tggttttgcc gggcttgaag ggcagccgcc tgctggacta catgggccct gtcttcggca
     1501 ctcatagaag ctttcagctg agcaagccgc gctcttgtcg cctgagcctg gcgtaggctc
     1561 aaagccttgt ctgggaccat gaccagccgc acccggtggg gattttcgag caaccagcgg
     1621 cgagcgagac cgcggataaa atcgggtcgt tcgatcgcgc ttcgtagatc ctcgagtacg
     1681 ggatcgagat ggatcgccgc gatcggatcc ccgccatgca aggccatagg gatcgtagct
     1741 cctaggagtt gcaaaccata gggataatgg ccgccccgga tctcccgctg ggccagctcc
     1801 atttggtgga gcacagagtc ggccatgcct ttcggcacac ctcgctcggc gacttcttgg
     1861 ataaccccca agaccagcct ttcaaccgtc tcggtttgct cgggattgga accttccaag
     1921 ccgcagacaa atagggcttc acgattggtg gtctccaacc cgcataactc ggagggagcc
     1981 gcgccatagg gagaagtctc taaagcgcgc cgcaagggcg aagcgctgtg attgagcagg
     2041 acgcctgcga gcaggtgggc agccatgatc tccttgggat ccagggtctt cccccagagc
     2101 catccaagca caatatgggt cttgtcacgg gtatcctctt gcccatccag ggcataaggc
     2161 aagacgaccg accgcggtgc ggtgtaacgc cgctcatcgg ggatgctgag atccagggaa
     2221 cgggctgcaa aatagctcag ggcccactcg tggaaatggg cctgatgctc agtcacatca
     2281 agatcgccat aggtggcaaa aaaggcattc gagggatgat aatgcttggc atgaaaggcc
     2341 ttgagctgtg cataggtgag cgtggggatc gcctcaggtt cgccgccgct gttgtaatga
     2401 taggtggtcg tgggaaacag ctcggcgctc aatgcctgcc acagcctcgc cgtgggcgcg
     2461 ctcatggcgc ctttcatctc gttgtagacc actcccttgt aaaccaaatc ggtcgccgga
     2521 tccgagggca ctacaaattc cacgtggtgc ccttcctggg caaaatccag cgcatcgagt
     2581 tgcgggaaaa acaccgcatc gagatagacc tgcagcaggt tatggaagtc
//
LOCUS       DASQSL010001210         3948 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_62516, whole genome shotgun sequence.
ACCESSION   DASQSL010001210 DASQSL010000000
VERSION     DASQSL010001210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3948)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3948)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3948
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62516"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(331..882)
                     /locus_tag="VE844_12465"
     CDS             complement(331..882)
                     /locus_tag="VE844_12465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009148664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1 family glyoxalase III"
                     /protein_id="HZC02130.1"
                     /translation="MATVLVPLAQGCEELEAVTVIDLLRRAGIEVVTASLDGQPVQAS
                     RGVTLIADTALDPIMDQEFDMIVLPGGSLGADHLDRDPRIRALLVKMAKHDKYTAAIC
                     AAPKVLGHAELLRGRKATGYPGVLDTMGLTEVTLSNEAVVKDGKVITSRGPGTAMDFA
                     LSLIETLLGKAKRDEVETALVRS"
     gene            complement(898..2220)
                     /locus_tag="VE844_12470"
     CDS             complement(898..2220)
                     /locus_tag="VE844_12470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020483749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HZC02131.1"
                     /translation="MKEHVRKLIVPFLGLVLGAHAVTGQSNPTSAKGERTAGLPLQEI
                     RAFTEVFDKIKTDYVEDINDKSLLESAIRGMLSGLDPHSTYLDPEAYQELQEGTTGEF
                     GGLGIEVGMEDGFIKVIAPIDDTPAQKAGIKPGDLIVRINDTSIKDLSLGDAVKMMRG
                     KPGTDIRLTIIREGQKEPLKITITRAVVKVQSVKSRILEPHFGYIRISHFQSHTGEDL
                     NEALVKLKEENGRDLKGLILDLRNNPGGILGSAVAAADIFLDRGLIVYTKGRATDSEM
                     RFNAMSADLLKDAPMVVLVNGGSASASEIVAGALQDHKRAVIMGSKTFGKGSVQTILP
                     MNNNAALKLTTALYYTPSGRSIQAEGITPDIVLDKVKIAAIEKAGLEDDIKEINLTRY
                     LNNGGKKTKDEAAPTKQESPSLMESDYEIHEAINLLKGLALLRGKSSS"
     gene            complement(2296..3477)
                     /locus_tag="VE844_12475"
     CDS             complement(2296..3477)
                     /locus_tag="VE844_12475"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HZC02132.1"
                     /translation="MVIRRVLTCVLAMGLSPPLAGMDTSPSGDEHSRQLEQVRSHINT
                     LEAEKKTAEGKLDALTEELKSSELAIAKASKQLDFISRAVHAKAGALEDLKRTKQAHW
                     RSLEAQKASLAKQIRLAYLMHRQDQLKLLLNQEDPFLIGRGLAYHSYYSRPWTQRIAA
                     LKEKLKEMDSLEQLLQLQTGEIEQLHHEQQTKLHEIEAYRNQRRNIIVAFKEQITSHN
                     QELEALRDQEQRIEALIRSIARGQGARDKPPVTRSAPFGKLKGKLLWPSRGRITQRYG
                     SPKKAGSLKWEGVFIEAEPGTAIQAVSAGRVVFADWFANLGLLVIIDHGEGFMTLYGH
                     NQALYVAKENWIKAGDIIASIGDSGGNTVSGLYFEIRHLGVPLNPLLWCQRLERAKLK
                     V"
     gene            complement(3483..>3948)
                     /locus_tag="VE844_12480"
     CDS             complement(3483..>3948)
                     /locus_tag="VE844_12480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011758183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HZC02133.1"
                     /translation="AIYSKKYDVILCNFANADMVGHTGNFEATVKAIEALDRCLGRIL
                     GAVQDRGGELLITADHGNAEKMREPSTRTKLGQAHTAHTSNMVPLIYVGRPAKISNNG
                     TLADIAPTLLYLMGLEQPPEMSGRSLIALEIESATAYKDSNRPRQRLGRLLR"
BASE COUNT          832 a         1102 c         1069 g          945 t
ORIGIN      
        1 cagtggcgcg ggtcgtgttt cgattctcct tacaagttgg catgatcccg ctaacaggaa
       61 caacaagcaa gatgcatatg aaggaggacc ttgccgcgta cgaagttgag ctaagtgagg
      121 cagaagttga aaccattgag aacattgcat gctgaatggc ttgcccgaac acaggagttg
      181 atcaaaacct agaacccttc ttcagggata tagagcacag tcatggtcgt gcgggcgctt
      241 gcggctgggt tgctataccc gcaggagcga ttcgccaaag atgagccctc accagtgcct
      301 ggagagctgc ctggctctaa gaatagacga ttaagatctc accaaagccg tctcgacctc
      361 atcccgctta gctttgccca gcagtgtctc gatcagactt aacgcgaaat ccatcgctgt
      421 ccccgggcca cgcgaggtga tcactttgcc atccttaacc acggcttcgt tgctcagggt
      481 cacctcggtc aggcccatcg tgtcgaggac gccggggtag ccggtggcct tccggccgcg
      541 cagcagctcg gcatgcccca ataccttggg agcggcgcag atggcggcgg tatatttgtc
      601 gtgctttgcc atcttgacaa gcagtgcccg gatgcgggga tcgcggtcga ggtgatccgc
      661 cccgagtgag ccaccgggca ggacaatcat gtcaaattcc tgatccatga tcggatcgag
      721 ggcggtatcg gcgatcagcg tcacgccccg gctggcctgg accggttgcc catccagact
      781 ggccgtgacg acctcaatac ccgcccggcg cagcagatcg atcacggtga cggcctcaag
      841 ttcctcgcaa ccttgggcga gtgggaccag aacagttgcc atggtactcc cctccaatta
      901 tgaagatgat tttccccgca gtaatgccag cccttttaag aggttgattg cctcatggat
      961 ctcataatcg ctctccatca atgagggact ttcctgcttg gttggagcgg cttcgtcctt
     1021 agttttctta ccgccattgt tcagatagcg ggtcagattg atctctttga tatcgtcctc
     1081 taagccggcc ttttcgatag cggcgatctt gaccttatcc agcacaatat ccggtgtgat
     1141 gccttcggcc tgtatcgaac ggccggaggg cgtgtaatac agggcggttg taagcttcaa
     1201 ggccgcattg ttattcatcg gcaggatggt ttgtaccgag cccttgccaa aggtcttgct
     1261 gcccataata acggcccgtt tgtggtcctg caacgcgcct gcgacaatct ccgaagcgga
     1321 ggctgagccg ccgttcacca ataccaccat aggggcgtcc ttcagcaaat cggccgacat
     1381 ggcattgaac cgcatctcgg aatccgttgc ccgccctttg gtatagacga tcagaccgcg
     1441 atcaagaaag atgtcggcag cggctacagc ggagccaagt atcccgccgg gattattgcg
     1501 caaatcaagg atcagtcctt tgagatccct tccattctct tctttcagct tgaccagggc
     1561 ctcgttgaga tcttcaccgg tatgggattg aaaatgggag atacggatat acccgaagtg
     1621 gggctccagg atacggcttt tgacgctctg gaccttaacg acggcgcgcg tgatagtgat
     1681 cttgagcggc tctttttgac cctcgcggat aatggtcaag cggatatccg tgccgggctt
     1741 gccgcgcatc atcttgaccg catcgcccaa gctcagatct ttaatcgagg tatcattgat
     1801 ccgaacgatc agatccccag gcttgatccc tgccttctgc gccggggtat catcgatggg
     1861 agcgatgacc ttgataaacc catcttccat gccgacctcg ataccaagcc ccccaaactc
     1921 gccggtcgtt ccttcctgga gctcttgata cgcctccggg tcaagatagg tcgaatgtgg
     1981 gtcgaggccc gagagcatgc cgcgaatagc gctctccaac aaggatttat cgttgatgtc
     2041 ctcgacataa tcggttttta tcttgtcgaa gacctcggta aaggcgcgga tctcctgcaa
     2101 aggaagtccc gccgttcgct cgcctttggc ggaagtggga ttgctctggc ccgtaactgc
     2161 gtgtgcgcca agcaccagcc caagaaatgg aacaataagt ttacgtacgt gctctttcat
     2221 aataggaatc gatcccccgc tttttacccc catctcccat cctcccccta gcggggaggg
     2281 tggggggtga agatactata ctttaagttt agccctctcc aggcgttgac accagagcag
     2341 gggattgaga ggcaccccaa gatgtctgat ctcgaaatag agcccgctca cggtgttgcc
     2401 tccgctgtcg ccgatactgg cgataatatc gcccgccttg atccaattct ctttggccac
     2461 atagagggcc tgattgtgcc catacaaagt cataaacccc tcaccatggt cgatgataac
     2521 gagtagccca agatttgcaa accaatccgc aaataccacc cgcccggcac tgacagcctg
     2581 gatcgcggta ccgggctcag cctcaataaa tacaccctcc cacttgagcg atccggcttt
     2641 tttggggctg ccataacgct gggtaattct gccgcgcgag ggccacagaa gtttgccttt
     2701 taacttacca aagggtgcgc tcctggtaac cgggggttta tctctagccc cctgtccacg
     2761 agcgattgat cggatcagcg cctcgattcg ctgctcttga tcgcgtagcg cctcaagttc
     2821 ctgattgtgg gacgtgatct gctctttgaa cgcgacgata atgtttcggc gctggtttcg
     2881 gtaagcttca atctcgtgca gcttggtttg ttgttcatgg tgcaactgct cgatttcgcc
     2941 ggtctgcaac tgtaacaatt gctccaaaga atccatctcc ttcaacttct ctttaagcgc
     3001 tgcgatccgc tgtgtccaag gacggctgta atagctatga taagcaagac cacggccgat
     3061 caagaaggga tcttcttggt ttaaaagcag tttcaactga tcttgccgat gcatgagata
     3121 agccaggcgg atctgtttag ccaaagacgc tttttgggcc tcgaggcttc gccagtgggc
     3181 ttgcttggtg cgctttaggt cctcgagggc gcctgccttg gcatgcaccg cgcggctaat
     3241 gaagtcaagc tgttttgagg ctttggcaat ggcgagctca ctgcttttga gctcttctgt
     3301 caaggcgtcg agcttgcctt cagcggtttt cttctcagcc tcgagggtat ttatatggga
     3361 gcgtacctgc tccaattgcc gggaatgttc atcgcccgag ggagacgtgt ccatacctgc
     3421 caacgggggc gatagaccca tagcaagcac gcaggtgaga acgcgccgga tgaccacgga
     3481 ttttatctta agaggcgtcc aagacgttga cggggccggt tggagtcttt ataagccgtg
     3541 gccgattcta tttccagcgc aatgagggat cggcccgaca tctccggagg ctgttccaaa
     3601 cccattaaat aaagtaaggt cggggcgata tccgcgagcg tgccattatt tgaaatttta
     3661 gcgggccgtc cgacatagat cagcgggacc atattactgg tatgggccgt atgcgcttgg
     3721 cccagtttgg tcctggtcga aggctcgcgc atcttttcag cgttgccatg atcggccgtg
     3781 atcaggagct ccccgcccct atcttgcacc gccccgagaa tacggcccaa gcagcggtcg
     3841 agcgcctcga tggctttgac ggtggcctca aagttaccgg tgtggccgac catgtcggca
     3901 ttggcgaaat tgcatagaat gacatcatac ttcttgctgt agatggct
//
LOCUS       DASQSL010001211         1024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_159182, whole genome shotgun sequence.
ACCESSION   DASQSL010001211 DASQSL010000000
VERSION     DASQSL010001211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159182"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..331)
                     /locus_tag="VE844_12485"
     CDS             complement(<1..331)
                     /locus_tag="VE844_12485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012645184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HZC02134.1"
                     /translation="MRQQAVTQVWEKTSMEGALEALRQSIARWIEQGTQLMTAIPSLS
                     LYRRDAPTQPTSYMQEPSLCLIAQGVKRVLLGDDTYVLDVHYFLITSVDLPTMVQIIT
                     ASREQPYL"
     gene            724..849
                     /locus_tag="VE844_12490"
                     /pseudo
     CDS             724..849
                     /locus_tag="VE844_12490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007920206.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
     gene            878..>1024
                     /locus_tag="VE844_12495"
     CDS             878..>1024
                     /locus_tag="VE844_12495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009630579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HZC02135.1"
                     /translation="MTTNENGNFAGKVAFVTGAASGIGRASALAFAREGASVVAADVS
                     EQGNQ"
BASE COUNT          237 a          290 c          302 g          195 t
ORIGIN      
        1 tcaggtacgg ctgctcccgg ctcgcagtga taatctgcac catcgtggga agatccacag
       61 acgtaatcaa aaaatagtgc acgtccaaca catacgtgtc gtcaccgagc agcacgcgtt
      121 tgaccccttg ggcaatcaag caaaggctcg gctcttgcat gtagctcgtt ggctgggtcg
      181 gtgcgtcccg ccgatacagg gacaagcttg ggatcgcagt catgagctgg gtgccttgct
      241 caatccagcg ggcaatgctc tgtcgcaaag cttcgagtgc accttccatg ctggtcttct
      301 cccacacctg agtgacggcc tgctgacgca tagatatctc ctctctaacc ttacccaacc
      361 ccccttgtgc tgtacaaccc attgatcgaa gagctcggac gattaggcaa gaaatgcgta
      421 ggattggtct accggcctgc gttcatgcag ggatacgata ggatcatcga cacggtcgca
      481 cagagaggtg agcacagtgg ggtatatgac gggccagccg cgggatgagc atggttcttg
      541 cgggatgcat ggcgcgacgg tgagagccgg acggcattca tcatggagaa aaaatggcga
      601 caatgcatat ccttgatgac gccgcaccgt ccgctcagaa cgccctggcc ccacatcgct
      661 atgggcgtcg cgacgcacga caacacgact atgaccgtta catacagtgg aggcatggac
      721 acaatggaca tcaaaagaag cggctcacag ccttccacga aagggccgga cgcatatttt
      781 accggctacg tgcggattga tccgctcttc caggcagctg ctcctgggcg tgttcttggc
      841 gcttgcgtgt aacaaacaac acgaaaagga gcaggaaatg actacgaacg agaacggaaa
      901 cttcgcaggg aaggtcgcgt tcgtgaccgg ggccgcgagc ggcattggcc gcgcatcggc
      961 ccttgcattc gcccgcgagg gagccagtgt ggtggccgcc gacgtgtccg agcagggcaa
     1021 ccag
//
LOCUS       DASQSL010001212         1198 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_187166, whole genome shotgun sequence.
ACCESSION   DASQSL010001212 DASQSL010000000
VERSION     DASQSL010001212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1198)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1198)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1198
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187166"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1043)
                     /locus_tag="VE844_12500"
     CDS             complement(<1..1043)
                     /locus_tag="VE844_12500"
                     /inference="COORDINATES: protein motif:HMM:NF033550.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3 family transposase"
                     /protein_id="HZC02136.1"
                     /translation="MDFECIDAWLDLPEFRVTDQVIRSHELELHLERRDTYLVCPRCQ
                     GCCERIKDGRARCIRDLPMLERPVTLQLHVRRFKCSDCHHRPWEKSETFGDRVKWTKR
                     LYDQVRQEFLHGCPCQELARRYGLSARTVFRWTFEKSRGGRPRKLGRALGIDEYSRRK
                     GHRYNTILVDLDKGRPITTFKGRRVEDVVAWFQSRPQAERDGVEVVVLDMSKSFYSAI
                     RQVFGDQVEVIDRFHVVQQAIGALDAVLRSVQNQLNPDEAKALKKLRKRWLKLPNQLE
                     VDELIARADWRRRFPELREVIDWVQGLRKWFKRKYDKPARAALWKLIERARESALEPL
                     DWLRYRAGQCRCHR"
BASE COUNT          274 a          360 c          300 g          264 t
ORIGIN      
        1 cgatggcacc ggcattgccc tgcccgatac cgaagccaat caaggggttc caacgcactc
       61 tcacgcgccc gctcaatgag tttccaaagc gccgcacggg ccggtttgtc gtatttgcgc
      121 ttaaaccact tgcgcaggcc ctgcacccag tcaatcactt cacgcaactc aggaaagcgt
      181 cgacgccagt cggcccgcgc aatcaactcg tccacttcga gctgattggg caacttcagc
      241 caacgtttgc gaagcttttt gagcgctttg gcttcatctg ggttgagttg gttttgcacc
      301 gatcgcaaca ccgcatcgag tgcccctatg gcttgctgga caacatggaa ccggtcaatc
      361 acctcaacct gatcaccaaa gacctggcga atcgccgaat aaaaggactt ggacatatcc
      421 aagaccacca cctcgacgcc atcgcgttcc gcttgagggc ggctttggaa ccacgccacc
      481 acgtcctcaa cccgtcgccc cttaaacgtc gtgatcggtc gacctttatc caggtccact
      541 aggatcgtat tgtagcgatg ccccttgcgc cttgagtatt catcaatccc gagggcgcgg
      601 cctagcttgc ggggccgtcc gccacggctc ttttcaaagg tccaacgaaa caccgtgcga
      661 gctgacaagc catagcgacg tgcgagttcc tggcatgggc aaccgtggag aaattcctga
      721 cgtacttgat cgtaaagccg cttggtccac ttcacccgat caccgaacgt ctcacttttc
      781 tcccacggcc gatggtggca atctgagcac ttgaaccttc tgacatggag ctgcaaggtc
      841 accggacgct ccaacatcgg caaatctcgg atacaacggg ctctgccgtc tttgatccgc
      901 tcgcagcatc cttggcagcg gggacaaacg aggtaagtgt cgcggcgctc gagatgcagt
      961 tccagctcat gggatcggat gacttggtcg gtcacacgga attctggcag gtcgagccag
     1021 gcatcgatac actcaaaatc catgcgtcgg gttcctcctg ctgggtaata ggtttgtcca
     1081 gcattttgcg aggaatccgg cgtaggtcaa tatttactat aatctcctta ttctcaacaa
     1141 gatacgttaa cctcaaagtt ggcaaagagc cagaaaaata tgcaggattc agaagtat
//
LOCUS       DASQSL010001213         1794 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_169269, whole genome shotgun sequence.
ACCESSION   DASQSL010001213 DASQSL010000000
VERSION     DASQSL010001213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1794
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169269"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            171..875
                     /locus_tag="VE844_12505"
     CDS             171..875
                     /locus_tag="VE844_12505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC02137.1"
                     /translation="MADLANAFATALTLLLNLDDNLLEIVLLSLQVSVSAVVLAALCG
                     FPLGAGLALFRFPGRTLLVVLINALMGLPPVVVGLTVYLVLSRSGPLGGLGLLFTPPA
                     MILAQWILVTPIVAAMTRQVIEDLWSEYGEQLRSLGIQPHHAVGTLLWEGRYRLFTAV
                     LAGFGRAIAEVGAVLIVGGNIAHATRVMTTAIALETARGDLALALGLGIILILLSLLI
                     NALVYLSQDFAQRFAD"
     gene            877..1638
                     /locus_tag="VE844_12510"
     CDS             877..1638
                     /locus_tag="VE844_12510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HZC02138.1"
                     /translation="MIPPRAARDPGDVLTADTILPLRLEAVCYAPQGRPLLDTVSAVL
                     ESGKSTVVLGPNGAGKSLLLRLCHGLITPSSGHLRWEGPSAAQAHRRQAMVFQRPVLL
                     RRSVAANIAYALHLRGVVRPERARRVQQALAMAGLEQLAERNARVLSGGEQQRLALAR
                     AWALQPEVLFLDEPTANLDPAAIRAVEEVITIFRASGTKIVMTTHDLGQARRLADEVL
                     FLHHGRLLERSPVAEFFECPQTREAQAYIRGELLW"
BASE COUNT          314 a          530 c          542 g          408 t
ORIGIN      
        1 gattccgtag gagttattag ttaacggcgc ttttgttgat attcaatgaa ctaccccgca
       61 gcaagctgac ggggtatcac ctttagaatt ttttcctttc gtagcaagct acggggaatt
      121 aaaccctaaa agagattaaa caggatgggc aaaggtgaag gataaaagac atggctgatc
      181 tagcaaatgc attcgccacc gcgcttaccc tgctcctgaa cctcgacgac aacctgcttg
      241 agattgtcct gttgtcgctt caagtgagcg tgtcggcggt cgtgctcgct gccttatgtg
      301 gttttccctt gggagcagga ttggccctct ttcgtttccc gggacgcacg cttttggtgg
      361 ttctgatcaa tgccttgatg ggtttaccac ccgtggttgt gggattgacg gtgtatctcg
      421 tgctctcccg atcgggtccg ttaggcggct tgggtctgct ctttaccccg ccggcgatga
      481 tccttgccca atggatcttg gtgaccccga tcgtggcggc gatgacccgg caggtgatcg
      541 aggatctatg gtcggagtat ggggagcaac tccgatccct cggaatccag ccgcaccatg
      601 cagttgggac cttgctctgg gaagggcgct accgtctctt cacagccgtg ctcgcaggct
      661 tcgggcgagc gattgccgag gtgggcgcgg tcctcatcgt cggcggtaac atcgcccatg
      721 cgacccgggt catgaccacc gccatcgcct tggagaccgc caggggagac ctcgccctcg
      781 ccttgggtct cggtattatt ctgattctgc tgtccttgct catcaatgcc ctggtttatc
      841 tctctcagga cttcgctcag cgattcgccg attaaggtga tccctccacg ggcggccagg
      901 gacccagggg atgtattaac cgcagatacc atcctaccgc tcaggcttga ggcggtttgc
      961 tatgcaccgc agggacggcc tttgctggat actgtctcgg ccgtgctgga gtccggcaag
     1021 agcaccgtgg tgctcgggcc gaacggggcc ggcaagagcc tgctgctgcg cctctgccat
     1081 ggcttgatca caccgagcag cgggcatctt cgctgggaag gaccgagtgc ggcccaggct
     1141 caccgccgcc aggcgatggt atttcagcga ccggtgttac tgcgccgctc ggtggctgcc
     1201 aatatcgcct atgcgctcca tctgcgcggc gttgtgcgtc ccgagcgcgc gcgccgggtc
     1261 caacaggcgc tcgccatggc cggtctcgag cagctggccg agcgcaacgc acgcgtgctc
     1321 tcgggaggag agcaacagcg gctggcgctg gcgcgcgctt gggccttgca gcccgaggtg
     1381 ctgttcctcg atgaaccaac ggctaatctc gatccggcgg cgatccgtgc ggtcgaagag
     1441 gtcatcacta tctttcgagc ctccggaacc aagatcgtga tgaccaccca cgatctcggc
     1501 caggcacggc ggctcgccga tgaagtgctg ttcttacatc acggccgctt gctcgaacgc
     1561 agtccggtag cggaattctt tgaatgtccg cagacgcggg aggctcaggc ctatatccgc
     1621 ggtgagttgc tgtggtaggg gttccatcac gtccctgacc aatagaagaa ggtgttaaaa
     1681 agattaaggg tttggcttct gatcgtcctc gccatcgcgg cctggcctcc aagcgcggca
     1741 gagcggttta tcaccctcgc ttcaaccacc tcaacccagg cctcgggtct gttt
//
LOCUS       DASQSL010001214         1389 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_77210, whole genome shotgun sequence.
ACCESSION   DASQSL010001214 DASQSL010000000
VERSION     DASQSL010001214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1389
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77210"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..277)
                     /locus_tag="VE844_12515"
     CDS             complement(<1..277)
                     /locus_tag="VE844_12515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012257775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006974 - DNA damage response [Evidence
                     IEA];
                     GO_process: GO:0018142 - protein-DNA covalent
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SOS response-associated peptidase family
                     protein"
                     /protein_id="HZC02139.1"
                     /translation="MTDGEALATRFNVNAIPADLTPRYNIAPSQSVAAIRTALEGVRE
                     WVMLRWGLIPAWAKDLSIGSRLINARAETAPEKPAFRDAFRHRRCLIP"
     gene            complement(322..1182)
                     /locus_tag="VE844_12520"
     CDS             complement(322..1182)
                     /locus_tag="VE844_12520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010959856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent
                     methylenetetrahydromethanopterin/methylenetetrahydrofolate
                     dehydrogenase"
                     /protein_id="HZC02140.1"
                     /translation="MKKLLFQFDTDPLPSVFDTVVAYDGGADHVAAYGGVDPQNAGTL
                     VEGTIFTRAPKDKKYIAIFIGGSKLEDGQALLKAVQKKFFGDFRVSVMLDSNGSNTTA
                     AAAVAHLTKGGSIVGKRAVVLAGTGPVGQRAAVMLAQEGAEVILTSRQRQRAEEACQL
                     MKERFGVSIHPAVCVFDETTIKQVLEGAQIVVATGAAGAHLLDEHHWKDHPTIEMMVD
                     ANATPPLGISGIDMMDRGKERYGKIVFGAVGFGGLKITLHRACIARLFERNDQILDAE
                     EIYALAKALA"
BASE COUNT          302 a          406 c          374 g          307 t
ORIGIN      
        1 caggaataag gcagcgccga tgtctaaagg catcacggaa ggcaggtttt tccggggccg
       61 tctccgcccg agcattgatc aaccgggatc ctatgctcaa atccttggcc caagcaggga
      121 tgagccccca gcgcaacatc acccattcac gcacgccttc aagagccgtc cggatcgccg
      181 ccacggactg gctgggggcg atattatagc ggggcgtaag gtccgccgga atcgcgttga
      241 cattaaaacg ggtggcgagg gcttcgccat ccgtcatcag tgcaaaccgc ccacacatgc
      301 caggggttat tcatcttctg atcaggccag cgctttggcc aaggcataga tctcttcggc
      361 atccaagatc tgatcgttgc gttcgaacaa gcgggcgata caagcacggt gcagggttat
      421 cttaagcccg ccgaagccaa ccgcgccaaa gacgatcttg ccatagcgtt ccttacctct
      481 gtccatcatg tcgatcccgc ttattcctaa ggggggtgtg gcattggcat cgaccatcat
      541 ctcgatggtc gggtggtctt tccagtgatg ctcatccagt aaatgagcgc cagcggcacc
      601 cgtggcgacg acgatctggg caccctcgag cacctgcttg atagtggtct catcgaagac
      661 acagaccgcg gggtgtatgg agacaccgaa gcgctctttc atcagctgac aggcctcctc
      721 agcccgctgc ctctgtcggg aagtaagtat cacctcagcc ccttcctggg ccagcatgac
      781 ggccgctcgc tggcctaccg ggccggtgcc agctaatact actgcccgtt tacccacgat
      841 tgatccacct ttagtcaggt gcgcgaccgc cgccgcggca gtggtgttac taccattact
      901 gtccagcatc actgataccc ggaaatcacc gaagaatttc ttttggaccg ccttcaacag
      961 cgcttgaccg tcctcaagct tgctaccacc aatgaagatc gcgatgtatt tcttgtcctt
     1021 tggggcacga gtaaagatag tgccttcgac cagcgtgccc gcattttggg gatctacacc
     1081 gccataggcc gccacatggt ctgcgccccc atcgtaagcc acaacggtat caaatacgct
     1141 gggcagcggg tcggtgtcga actggaacag gagttttttc attgtttatc ctcaaataat
     1201 gctttttctt aagaactaag agagtagggg tctgccccga tctagcctag cacccatttt
     1261 tttctaaacg tgtttagaat agaaaatcta gccacacttc tcaaatagat ttcgcgggga
     1321 agcgtcgtga gcgggcgtca gctgggggag gccggagcgc tggaatcgga tctcggctta
     1381 gggacagcg
//
LOCUS       DASQSL010001215         1186 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_187214, whole genome shotgun sequence.
ACCESSION   DASQSL010001215 DASQSL010000000
VERSION     DASQSL010001215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1186
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187214"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            44..961
                     /locus_tag="VE844_12525"
     CDS             44..961
                     /locus_tag="VE844_12525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009207852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HZC02141.1"
                     /translation="MVLAAGEHGAYRFLDFFASNIRNPNTRAAYFYNVCDFFAWCQGR
                     GVRELAEVRPHHVAGYIERMTKTHAAPTVKQHLAAIRMLFDWLVVGQVVPTNPAGSVR
                     GPKYVVKQGKTPVLMGEEARRLLDSIKTETVVGLRDRAFIALLVYTFARVSAAVHMNV
                     EDVYVQGKRTWVRLHEKGGKEHTLPCHHELEAYLDAYMEAAGVDGEKGLPLFRTAFGK
                     TGKLTPRRFDRQSAWYMVKRRAAEAGILSPIGCHTFRATGITAYLLNNGSLEKAQMMA
                     AHESPRTTKLYDRTNDQISLDEVEWILLE"
BASE COUNT          274 a          322 c          332 g          258 t
ORIGIN      
        1 caaaaaattg tcggccgata tcggagcgca gacgctgcca gcgatggtcc ttgccgccgg
       61 cgagcacggc gcgtaccgct ttcttgactt ttttgcttcc aacatccgca atccaaacac
      121 ccgtgccgcg tacttctaca atgtgtgtga tttttttgcc tggtgccagg gtcgtggtgt
      181 gcgcgagctc gccgaggtcc ggccgcatca cgtggctggg tacatcgagc ggatgacaaa
      241 aacacacgcc gcacccacag tcaaacagca cctggccgcc atccgtatgc tctttgactg
      301 gcttgtggtg ggccaggtcg tgcctacgaa cccggccggg tccgtgcgcg ggcccaagta
      361 tgttgtcaag cagggcaaga cgccggtgct catgggcgaa gaagccaggc ggctgcttga
      421 ctccatcaaa accgaaaccg tggtgggtct gcgagaccga gccttcatcg cgctcctggt
      481 atacaccttt gcccgggtct cggccgccgt gcacatgaat gtcgaggatg tctatgtgca
      541 aggcaagcga acatgggtgc ggctccacga aaaaggcggc aaggagcaca cactcccctg
      601 ccaccacgag cttgaagcct atcttgacgc ctatatggag gcggccggtg tggacggcga
      661 gaaaggtttg ccgctctttc gcaccgcatt cggcaaaact ggaaagctca cgcctcgccg
      721 gtttgacagg caaagtgcct ggtacatggt aaagcgccgg gctgctgaag ccggtatcct
      781 ctcccctatc ggctgccaca cctttcgggc cacgggtatt acagcgtatc tattaaacaa
      841 tgggtcgctc gaaaaggcac agatgatggc cgcgcatgag agcccgcgta cgacaaaact
      901 ctatgaccgg accaatgatc agatttcact tgatgaagtg gagtggatct tattggagtg
      961 aaccattgta agcggagtcg gtagtgccat atcgttttga ttatatcaaa actcaatatc
     1021 attgtcaaaa tatgaaacga tggtttagag atgcagtttt gcgacaggag cttctgctca
     1081 ggaggcgttt tttgaacggt gtcagcgagg tgtctcaaaa acaagggtct ttgatacaaa
     1141 cttggcacta aactcaagag tcaatccgaa cacctctgct cctaaa
//
LOCUS       DASQSL010001216         1334 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_159219, whole genome shotgun sequence.
ACCESSION   DASQSL010001216 DASQSL010000000
VERSION     DASQSL010001216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1334
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159219"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(21..377)
                     /locus_tag="VE844_12530"
     CDS             complement(21..377)
                     /locus_tag="VE844_12530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding domain-containing protein"
                     /protein_id="HZC02142.1"
                     /translation="MNVRRWLILAIVGGQLIGVALVGAAPRPSDPTPTVAFMQLALRI
                     LGYDPGPIDGLSGRRTIAALTAYAHERQVVLNRATAELVMTLLAAEASAALDRSAPTG
                     ESIGAPRLKMLPVYQW"
     gene            677..910
                     /locus_tag="VE844_12535"
     CDS             677..910
                     /locus_tag="VE844_12535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02143.1"
                     /translation="MSATTLSSRVANAGQIALEHALFCLECELIFAGAASCPRCTSEA
                     VWPLAEWVHPIRPAGAVSKREDNLIESSHYESA"
     gene            1009..1245
                     /locus_tag="VE844_12540"
     CDS             1009..1245
                     /locus_tag="VE844_12540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016489979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dodecin"
                     /protein_id="HZC02144.1"
                     /translation="MQDIGKTYKLIELVGVSERSTEDAIQNALAQASQSLKGLSWFEV
                     KEMRGLIEEGKVSQFQVTLKIGFRILSENELSGD"
BASE COUNT          297 a          370 c          408 g          259 t
ORIGIN      
        1 tattgttgta tcccccgcca ctaccattga tagaccggca acattttcag ccgtggtgcg
       61 ccgatcgact ccccggtggg tgcgctacgg tcgagggccg ccgaggcctc ggcggccagg
      121 agagtcatca ccagctccgc ggtcgcccgg ttcagaacca cctgccgctc atgggcatag
      181 gctgttaacg ccgcgatcgt gcgccgccca ctcagcccat cgatggggcc ggggtcatag
      241 ccgaggatac gcaaggcgag ctgcatgaag gcgaccgtgg gcgtggggtc agacggccgt
      301 ggggcggccc cgactagcgc cacccctatc aattgcccgc ccactatagc gaggataagc
      361 caacgccgaa cgttcatagt tctccttcca tgccccggaa atatggcgcc atcgccgatc
      421 tggcttcggg tcgacggctc ccaccctcgg gctacgacaa agcgagtcag ccgtggtgcg
      481 cctcaacgat gggcttccac gcgcgcaaga tctatgccag gtcaagtgct agaagggtga
      541 tccggtagtc agccttgccg ggaacaggga gaataaagcg agtcacccga ggaaaggcat
      601 ggcacgccct ttgctcctcc tcaggctaga ccgtgacgcg gcctacagcc catagatcgt
      661 ggggggaggg atagcaatgt cggcaaccac tctttcatcg cgagtagcta acgcgggaca
      721 gatcgcgctc gagcacgcgc tcttctgcct cgagtgcgag ctcatctttg cgggtgcggc
      781 ctcctgtccc cggtgtacta gcgaggcagt atggcccttg gcggaatggg tgcatcccat
      841 ccgtccggcc ggggccgtct cgaagcggga agacaacctg atagagtcct ctcattatga
      901 gagcgcctaa cattatgaga gatatgaaag cgctagggat ggataggtgt agagagtacg
      961 acggctaacg gcgagtgcga gtggaacgtc acgtacatgg agggcatgat gcaagatatc
     1021 ggtaaaacct acaaactcat cgaactcgtg ggagtctctg agcgttctac ggaggatgcg
     1081 atacagaatg ccttagcaca ggcctcacaa agcctgaaag gtttgtcttg gtttgaagtc
     1141 aaggagatgc gtgggcttat cgaagagggt aaggttagcc agtttcaagt aacactgaag
     1201 atcggctttc gcatcttgag tgagaacgaa ctttcgggag actaaccctc gcatctccgt
     1261 gggagacctt aatccttctt tcagcacgaa gcaaaggagg agttaaggga cttaaggcaa
     1321 atggctgagc attt
//
LOCUS       DASQSL010001217         1215 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_23553, whole genome shotgun sequence.
ACCESSION   DASQSL010001217 DASQSL010000000
VERSION     DASQSL010001217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1215
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23553"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..381)
                     /locus_tag="VE844_12545"
     CDS             complement(<1..381)
                     /locus_tag="VE844_12545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020475376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HZC02145.1"
                     /translation="MAMQLELIPENAPFSSEQRAWLNGFFAGLLSLEQLGAQSAAQPL
                     QAEEDYPWHDPSIELDERMKLAEGRPFELKLMAAMGQLDCGQCGYLCKSYAEVIMRGE
                     ETDLTLCVPGGRPTAKKLKELVAEA"
     gene            complement(385..>1215)
                     /locus_tag="VE844_12550"
     CDS             complement(385..>1215)
                     /locus_tag="VE844_12550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020475377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NirA family protein"
                     /protein_id="HZC02146.1"
                     /translation="RLKYVLDRWGLEKYLQETEKHLPFKLTRFPIEDCEPRLPVNKHA
                     HIGFHPQKQAELYYVGVALSVGKLTVAQMRGIAAIAERYGSGTLRLTVWQNLLISDIR
                     EQDIAAVKGAIQDLDLAWRANSIRAGLVACTGNTGCKFSAANTKYHAERIAEYLEQRV
                     ELDQPINIHLTGCHHSCAQHYIGDIGLLACKIARGDDQEVEGYHIFVGGGYGSERRLA
                     QEIRRNVPADEAPAYLKTLLECYLKHRLGPQEGFAVFSQRYPGEQFKHLLEHYSAEAA
                     "
BASE COUNT          221 a          369 c          363 g          262 t
ORIGIN      
        1 agcctcggca accagctctt tgagcttctt agcggtaggc cgcccaccgg ggacgcaaag
       61 tgtcagatca gtctcttccc cgcgcatgat cacctccgca tagctcttgc agagatagcc
      121 gcactgccca caatccagct gccccatggc ggccatgagc ttgagctcaa agggccggcc
      181 ttcggccagt ttcatgcgtt catcaagctc aatgctgggg tcgtgccagg ggtaatcctc
      241 ttctgcttgt agcggctgag cggcactctg tgcgcccagt tgctcaaggc tcaacaatcc
      301 tgcgaaaaag ccgttgagcc aggccctctg ctccgagctg aacggggcgt tctcggggat
      361 caattcaagc tgcatagcca tggcttacgc ggcctcggca ctgtagtgct cgagcaggtg
      421 tttgaactgc tcgccggggt agcgctggct gaataccgca aagccctcct ggggacccag
      481 gcggtgcttg agatagcatt caagcagcgt cttgagatac gccggggcct cgtcggccgg
      541 cacgttgcgg cggatctctt gggccagtcg ccgctccgaa ccgtagccgc cccccacaaa
      601 gatgtggtaa ccctcaacct cttggtcatc gcctctcgcg atcttgcaag ccaagaggcc
      661 gatatctccg atataatgct gggcgcagga gtggtggcag ccggtgaggt ggatgttgat
      721 cggctgatcc agttctaccc gctgctccag atactccgcg attcgttcgg cgtgatactt
      781 ggtgttggcg gctgaaaatt tgcagccggt attgccggtg caggcgacga gccccgcccg
      841 gatgctgttg gctcgccaag ccaggtcgag gtcctggata gcccccttga ccgccgcgat
      901 atcctgttcg cggatatcgg agatgagcag gttttgccac acagtgaggc gtagggtgcc
      961 actgccatac cgttccgcga tcgccgcgat tccccgcatc tgtgctaccg taagcttccc
     1021 caccgacagc gcgaccccga cgtagtagag ctccgcttgc ttttggggat ggaaaccgat
     1081 gtgggcgtgt ttgttaaccg gcaggcgggg ctcgcagtcc tctatgggaa accgagtcag
     1141 cttgaagggg aggtgtttct cggtctcctg gagatacttc tctaaacccc atcgatcaag
     1201 cacgtacttg agccg
//
LOCUS       DASQSL010001218         1071 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_62664, whole genome shotgun sequence.
ACCESSION   DASQSL010001218 DASQSL010000000
VERSION     DASQSL010001218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62664"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..885
                     /locus_tag="VE844_12555"
     CDS             <1..885
                     /locus_tag="VE844_12555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ISKra4 family transposase"
                     /protein_id="HZC02147.1"
                     /translation="TNRAAKGLGVLDVAPSREQIDERIAQVAAGKWRRPVVVLGIDGA
                     FAPTRPESARGRRPGQRRQRARRPTWKGQWREVKGFRFYLIDGERIVHLLSWHQIQNE
                     AELGEALKAVKEANLIPEDRVRLCVICDGASWIWEHVQSLFGSARQVLDYYHCSEYLH
                     RMAKAQYGDSQQAHEWVEATLTRWYLGKISAVLGGLGRMQATSEEAQQAISNGWAFLH
                     KHRGRTHYLKLRRGGYPLGSGGIESANKFICHTRLKRSGAWWYEINCNQMLALRCAKY
                     NGALDQVFVRHQERLRAA"
     gene            complement(905..1071)
                     /locus_tag="VE844_12560"
                     /pseudo
     CDS             complement(905..1071)
                     /locus_tag="VE844_12560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013074275.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="IS110 family transposase"
BASE COUNT          226 a          280 c          343 g          222 t
ORIGIN      
        1 acgaatcgag cagccaaggg cctcggcgtg ttggatgtgg cgccgtcgcg cgagcagatc
       61 gacgagcgca tcgcccaagt cgccgcgggc aaatggcgcc gaccggtagt ggtgctcggc
      121 attgatggcg cctttgcgcc gactcgccct gaaagtgctc ggggccgtcg cccagggcag
      181 agacgccagc gggccagacg ccctacgtgg aaggggcagt ggcgcgaggt caaggggttt
      241 cgattttatc tcatagatgg cgagcgcatc gtgcatctgc tcagttggca tcagatacaa
      301 aacgaggccg agctcggtga ggcgctcaaa gcagtcaaag aagcaaacct gattcccgaa
      361 gatcgcgtgc ggctttgtgt aatctgcgat ggtgcttctt ggatatggga gcatgttcag
      421 tcgctctttg gcagtgctcg tcaggttctc gattactacc actgtagcga atatctccat
      481 cgcatggcca aggcgcaata cggcgattca cagcaagctc acgagtgggt cgaagcgacg
      541 ctgacgcggt ggtatctggg caagatcagc gccgtgctcg gggggctggg gcgcatgcaa
      601 gcgacttcag aggaggcgca acaagcgatt tcgaacggct gggcatttct gcacaaacat
      661 cgagggcgaa cgcactacct caagcttcgt cgagggggct atccgttggg cagtggtggg
      721 attgaatcgg ccaacaagtt catttgccac acgcgcctca agcgctcggg ggcttggtgg
      781 tacgaaatca actgcaacca gatgttggct ttgcgttgtg ccaagtataa cggcgctttg
      841 gatcaggtgt ttgtgcgtca tcaagaacga ttacgggcag cgtaagaatc accgaatgct
      901 cgtcttgcaa gatcagccga cccgagacgc ccatgacgtc cgtcgccaca ctggccaact
      961 tgatgttggc gtcttctaga attttttgca ggcggttcac ctcatcgcta tgagtgttga
     1021 cgagttgacg gcgatagcgg gtcaggtcac gcaggtcacg aatctcgatg g
//
LOCUS       DASQSL010001219         2546 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_187248, whole genome shotgun sequence.
ACCESSION   DASQSL010001219 DASQSL010000000
VERSION     DASQSL010001219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2546
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187248"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1624
                     /gene="sdhA"
                     /locus_tag="VE844_12565"
     CDS             <1..1624
                     /gene="sdhA"
                     /locus_tag="VE844_12565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010960822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HZC02148.1"
                     /translation="MSAALGNMGPDDWRWHMYDTVKGSDWLGDQDAIEYMCREAVPAV
                     IELEHYGVPFSRTEDGKIYQRPFGGMTTEFGQGIAQRTCAAADRTGHAILHTLYGQSV
                     KRDVSFFTEYFALDLIMDDTDACRGMMAWRLDDGTIHRFRAHAVVLATGGYGRAYFSC
                     TSAHTCTGDGNAMVLRAGLPLQDMEFIQFHPTGIYGSGCLITEGARGEGGYLTNAQGE
                     RFMERYAPNAKDLASRDVVCRAMTIEIREGRGVGPEQDHIHLHLEHLDQKVIHERLPG
                     IAESAKIFAGVDITREPIPVLPTVHYNMGGIPTNYQGQVVTLKDGDPDTIVPGLMAIG
                     ECACVSVHGANRLGSNSLLDLIVFGRAAANHCAEHVNPGQSHKPLPESLSELVLSRFD
                     RLRHARGSRPTAKIRLEMQKIMQDHAAVFRTGELLQAGIARLRDTWASFEDVHVSDRS
                     LIWNTDLVETLELENLIGQAMISICSADNRLESRGAHAREDYPKRDDQNWLKHTLAWI
                     DGKGQVRFGYRPVHLYTLTDEVEVVPLKARVY"
     gene            1661..2440
                     /locus_tag="VE844_12570"
     CDS             1661..2440
                     /locus_tag="VE844_12570"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020650145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008177 - succinate dehydrogenase
                     (ubiquinone) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HZC02149.1"
                     /translation="MAQFRLPKNSVIGKGKTVSMANGVNRRKAFVIYRYDPGPGENPR
                     LDTFEIDLDRCGPMVLDALIYIKNELDPTLTFRRSCREGVCGSCAMNIDGTNTLACTK
                     LIEDIKKAVKIYPLPHLPVIKDLVPDLTHFFAQYASVKPWLQTDTPAPDRERLQSKEE
                     RARLDGLYECILCACCSTGCPSYWWNSERFLGPAVLLQAYRWIVDSRDEKTGERLDEL
                     EDPFRLYRCHTILNCTQVCPKGLNPAKAIAEIKKRLVERSL"
BASE COUNT          536 a          743 c          736 g          531 t
ORIGIN      
        1 catgagcgca gcgctcggca atatgggtcc cgacgactgg cgctggcata tgtacgacac
       61 ggtcaagggt tccgactggc tcggtgatca ggacgcgatc gagtatatgt gccgggaagc
      121 cgtgcctgcc gtcatcgagc ttgagcacta tggggtgcca ttctcacgca ccgaagacgg
      181 caagatctat caacggccct tcggcggcat gaccacggag ttcggccagg gcatcgccca
      241 gcgcacctgc gccgccgccg accgcaccgg ccacgccatc ctgcacacgc tctacggcca
      301 gtcggtgaaa agggatgtga gcttcttcac cgagtacttt gccctggatc tgatcatgga
      361 tgatacggac gcctgccgtg gcatgatggc ttggaggctg gatgacggta cgatccaccg
      421 tttccgcgcc catgccgtgg ttttggcgac cgggggttat ggccgcgcct atttctcctg
      481 cacctctgcc cacacctgca ccggggatgg caatgccatg gtcttgcggg ccggcttgcc
      541 cttgcaggat atggaattta tccaattcca tccgaccggg atctacggtt ccggctgcct
      601 catcaccgaa ggcgcccgcg gcgagggcgg atatctcacc aatgcccagg gtgagcggtt
      661 tatggagcgc tacgcgccca atgccaagga tctggcctcg cgcgatgtgg tctgccgcgc
      721 catgaccatc gagatccgtg agggccgcgg tgtgggacca gaacaggatc atattcatct
      781 gcacctggag catctggatc agaaggttat ccatgagcgt ctgcccggta tcgccgagtc
      841 ggccaagatc ttcgccggcg tagacatcac ccgggaaccc atccccgtgc tgcctaccgt
      901 ccactacaac atgggcggca tcccgacgaa ttatcagggc caagtcgtga ctcttaaaga
      961 cggcgatccg gatacgatcg tgccggggct catggctatc ggcgagtgcg cctgtgtctc
     1021 ggtgcacggc gccaatcgct tgggatccaa ttcgctgttg gatctcattg tctttggccg
     1081 ggccgcggcg aaccactgtg ccgagcacgt taatcccggc caatcccata aacccttgcc
     1141 tgagagtttg agcgaactcg tattgagccg cttcgaccgc ctgcgtcatg ctcgaggttc
     1201 gcggcctacg gccaagatca ggctcgagat gcaaaagatc atgcaggatc atgccgcggt
     1261 attccgaacc ggggaattgt tgcaagcggg tatcgccagg ctcagagaca cctgggcgtc
     1321 cttcgaggat gtccatgtct ccgaccgctc gctgatctgg aacaccgatc tggtggagac
     1381 cctggaactc gaaaacctaa tcggccaggc catgatcagc atctgctcgg ccgataatcg
     1441 tcttgaaagc cgcggcgcgc atgcccgcga agactatcca aagcgggatg accaaaactg
     1501 gctcaagcat accctggcct ggatcgatgg caagggccag gtacgctttg gctaccgtcc
     1561 ggtccatctg tacacgttga cggatgaggt cgaggtggtc ccgctcaagg cgcgggtgta
     1621 ttaaaatctc tttagagctg agaatgaggg aaaataacgc atggcgcaat tcagactgcc
     1681 aaaaaattcg gtgatcggta aaggtaagac cgtctccatg gcgaacggtg tcaacaggcg
     1741 aaaggccttc gtcatctacc gttatgatcc cgggccgggt gaaaaccccc gcctggatac
     1801 cttcgagatc gatctcgata gatgtgggcc gatggtgctc gatgcgctca tctatatcaa
     1861 aaacgaactg gacccgacac tcaccttccg acgttcctgc cgggagggcg tgtgcggctc
     1921 ctgcgccatg aatatcgatg ggaccaatac gctcgcctgt accaaactga ttgaagatat
     1981 caagaaagcg gtcaagatct atcccctgcc ccacctgccg gtcatcaagg atctcgtccc
     2041 tgatctgacc catttctttg cccagtatgc ctcggtgaaa ccctggctgc agacagacac
     2101 gccggccccg gatcgcgaac ggctgcagtc gaaggaggag cgggccaggc tggatggttt
     2161 atatgaatgt atcctctgcg cctgctgctc aaccggttgc ccgagttact ggtggaatag
     2221 cgagcgtttt ctcggaccgg ctgttttgtt acaggcctat cgctggatcg tcgatagccg
     2281 tgatgaaaag acgggtgaac ggctggatga acttgaggat ccctttcgct tatatcgctg
     2341 tcacaccatc ctaaactgca cccaagtctg tcccaagggg ctcaaccccg ccaaggccat
     2401 cgctgagatc aagaagcggc tggtagaacg gagtctatag atcaatcgtt gcaggaatca
     2461 gtcgttttta ataaggatcg taaccggctc agatggcgtt gccggcgagg tatacgcgaa
     2521 ctcgatctgc tattacagca ctttct
//
LOCUS       DASQSL010001220         1713 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_114601, whole genome shotgun sequence.
ACCESSION   DASQSL010001220 DASQSL010000000
VERSION     DASQSL010001220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114601"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..903
                     /locus_tag="VE844_12575"
     CDS             <1..903
                     /locus_tag="VE844_12575"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HZC02150.1"
                     /translation="AAVILTNDGVVVVDSHSKPSAAQALYREIRGVTKNPVSKIINTH
                     FHWDHWQGNQVYAAEFPNLEIIASERTKENLTRPDAGVGGVPYIDKQLAALPKEIEKL
                     KDEILKASSPEQKARLEANLQQAEAYLAELKDLKPTLPTRTVANTVTLNEQGREIQLL
                     LLGRGHTDGDIYTYLPKEKVVVTGDAVIEWMPFLGDGYPEEWVQTLSALEQVDFTHMI
                     LGHGEVASKEHLTFFKGYLTDLIASVKKAAAEGGTLEEMQKTLPDQLAPRYEQRMSKY
                     PLGRYRDRIGVNIETVYKKVVQKG"
     gene            1033..1191
                     /locus_tag="VE844_12580"
     CDS             1033..1191
                     /locus_tag="VE844_12580"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HZC02151.1"
                     /translation="MFVGKTLQGAKPEALPVERPMKLELTVNLKTAQVLGLTIPPHIL
                     LLADEVIR"
BASE COUNT          392 a          515 c          500 g          306 t
ORIGIN      
        1 gccgcggtca tcctgaccaa cgatggcgtg gtcgtggtcg attcccattc caagccctcg
       61 gcggcccagg cgctgtaccg ggaaatccgc ggcgtcacca agaacccggt cagcaagatc
      121 attaacaccc atttccactg ggatcattgg caggggaacc aggtctatgc cgcagagttc
      181 ccgaacttag agatcatcgc ctccgaacgg acgaaggaga acctgaccag gccggatgcc
      241 ggcgtcggcg gggtccccta tatcgacaag cagctcgcgg cgctccccaa agagatcgag
      301 aagctcaagg acgagatcct gaaggcgagc agccccgagc agaaggcccg cctggaggcg
      361 aacctccaac aagccgaggc ctatctcgcg gaactcaaag acctcaagcc caccttgccg
      421 acgcgaacgg tcgcgaacac ggtgaccctt aacgagcaag ggcgtgagat ccagctcctg
      481 ctcctcggtc ggggccatac cgatggtgat atctacacct atttgcccaa ggaaaaagtg
      541 gtcgtcaccg gcgatgccgt gatcgagtgg atgccgttct tgggcgacgg ctacccggag
      601 gagtgggtgc agaccttgag cgccctcgag caggtcgact tcacccacat gatcctcggc
      661 catggcgagg tggcctcgaa ggaacacctc acgttcttta agggctacct gacggacctc
      721 attgccagcg tgaagaaagc cgcggcggag ggcggcacgc tcgaggagat gcagaaaacg
      781 ctcccggacc agttggcgcc gcgctacgag cagcgcatgt ccaaataccc gctggggcgg
      841 taccgggacc gcatcggggt gaatatcgag acggtctata aaaaagtggt ccagaaaggt
      901 tagcgtcctg gagaggggca agggccagtc gcctggtgcg ccctctcctc tcatcaccat
      961 cacgctggtc aggcgctcaa gggctggccc agagcggcgg gcctgccgcg cacgacctac
     1021 cgacagatag gaatcttcgt cggtaagacc ctgcaaggcg ccaagcctga ggctctgccg
     1081 gtggagcgtc cgatgaaact cgaactgacc gtcaacctga agacggccca agtgctggga
     1141 ctcacgatac ccccgcacat cctcctgttg gcggatgagg tgatccgctg agccgcaacg
     1201 cctggtgccc ccacgacgag aggtggtttg caagttaaat cgggctcttg gccgaatggc
     1261 gttaagttag ttgaaatccc ttttgttata gctagttaga ggaattcgtc cccggggcaa
     1321 gctttctgtc ggctcgatcg agatggatcg aaccccacgc cgtcacacac tgggccaagc
     1381 aggcttgcgg cgaccccgac catgttgaga agcacgtaaa gcattgatac agcagtatat
     1441 cggagtttaa cttcatgcca ttcgggtcat ccgcactttt ggtgatgatg tttaatcgga
     1501 cctcttgatt tcaggcggtt tatcggagaa atccccgaaa aataccacag tcgcctaact
     1561 gcccgcaaca caaggacatt cagtcaccct tcaccaaaag cgtcatgcag actggctcta
     1621 caccccacag gatgaaaatg gtaggataac gcctactatc ctcccggtgg ctggatggcc
     1681 tgccactcgc atggggcgcg aaagcgcatg cca
//
LOCUS       DASQSL010001221         1542 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_62781, whole genome shotgun sequence.
ACCESSION   DASQSL010001221 DASQSL010000000
VERSION     DASQSL010001221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62781"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..394
                     /locus_tag="VE844_12585"
     CDS             <1..394
                     /locus_tag="VE844_12585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006890301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HZC02152.1"
                     /translation="TTVLWAIGLELAFLVGLLAGLMSFVPYLGVIVGIVTASLAALVQ
                     FQDLIHVIYSLIVFGIGQLLEGMVLSPRLIGERIGLHPVAVIFAVMAGGQLFGFFGVL
                     LALPIAAVIVVLLRHSRELYFESDFYTP"
     gene            391..1107
                     /gene="hda"
                     /locus_tag="VE844_12590"
     CDS             391..1107
                     /gene="hda"
                     /locus_tag="VE844_12590"
                     /inference="COORDINATES: protein motif:HMM:TIGR03420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0032297 - negative regulation of
                     DNA-templated DNA replication initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA regulatory inactivator Hda"
                     /protein_id="HZC02153.1"
                     /translation="MSFQSPYAAQVPLPFFGPYGDPQSFELYFPGANREAYQCLLELC
                     DTASPLSLYLWGGPGSGKSHLLQATCQRFYERGRQAAYLPLSQIPEWSPAVLEGLESL
                     DLVGLDEIDCLAGRSEWELALLHLYNRLGDSARPLIMAGRIHPQGLSIKRADLKSRLL
                     GSLVFHLQGLNDEAKVMSLQQRAGARGFELPLEVARYLLKHYPRDMKALCCLLDTLDR
                     ASLVAQRRLTIPFVRALLDS"
     gene            1157..>1542
                     /locus_tag="VE844_12595"
     CDS             1157..>1542
                     /locus_tag="VE844_12595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02154.1"
                     /translation="MEAKSVEPNAVQSWVVRGWQLFVKNPGMWIFLTFIGLVVDVILA
                     LFPLRLLGSLALAVITPALFSGLLYGAAELDNGRSLNVEDLFRGLTDPVKRIPLLKLG
                     VVTVVAAIPGLIGLLMFKGGMFLTLLG"
BASE COUNT          283 a          380 c          455 g          424 t
ORIGIN      
        1 tacgaccgta ctttgggcaa taggtctgga gctggccttc ttggttgggc tgctcgcggg
       61 tttgatgagt tttgtacctt atcttggggt gatcgtcggc atagtcacag cgagcctcgc
      121 ggcactggtg cagtttcaag atctcatcca tgtgatctat agtctaattg tatttggcat
      181 cggtcaattg ctcgaaggta tggtattatc gcctcggttg atcggcgagc gcattggctt
      241 gcatccggtg gcggttatct ttgcggtgat ggcgggtggg cagctgttcg gctttttcgg
      301 ggtcttgttg gcgctgccga tagccgccgt gatcgtggtg ctattgcgtc attcccgtga
      361 actttatttt gagagtgatt tttacacgcc atgagcttcc agagtccata cgctgcgcaa
      421 gtacctttgc ccttctttgg gccgtatggg gatccccaaa gtttcgagct ctatttccct
      481 ggggccaatc gtgaagccta tcagtgcctg ctcgaactct gtgacacggc aagcccctta
      541 agcctgtatc tatggggagg ccctggatcg ggtaaaagcc atctgttgca ggcaacgtgt
      601 caaaggtttt atgagcgtgg cagacaagcg gcgtatttgc ccttatccca gatcccggag
      661 tggtcgccgg ccgtgctcga gggactcgaa tccttggatc tggtgggctt ggatgagatc
      721 gactgcctcg ccggccggtc tgaatgggag cttgcgctgt tgcatcttta taaccgcctg
      781 ggcgatagcg cacggccttt aatcatggcc ggccggatcc acccccaggg actctcgatc
      841 aaacgcgccg atcttaagtc acgcctgctt ggcagcctgg tttttcatct tcagggtctc
      901 aatgacgagg ccaaggtgat gagcttacaa cagcgcgccg gggcgcgggg ttttgagttg
      961 cctttggagg tggcgcgtta cctattgaaa cattatcctc gcgatatgaa ggcgctttgc
     1021 tgtctgctag acaccctgga tcgggcctcg cttgtggctc agcgtaggct tacaattccc
     1081 ttcgtgcggg cgctgctcga tagctagaag gcaggcccgc ttccatcaaa actacaatga
     1141 ataaaaggag actactatgg aagcaaaatc cgttgaaccc aatgcagttc agtcttgggt
     1201 agtacggggc tggcaactgt ttgtcaaaaa tccgggaatg tggatattcc tgaccttcat
     1261 cggcttggtg gtcgatgtca tcctggcgct tttcccgctg cggcttctag gtagcctggc
     1321 gttggcggtg atcacaccgg cgttgttttc agggctttta tacggggctg ccgagcttga
     1381 taatggccgg agcctcaatg tcgaggatct atttcgcgga ctgaccgatc cggtaaaacg
     1441 gatacccttg ttaaaattgg gtgtggtgac cgtggtagcc gctatacctg gcttaatcgg
     1501 actgctgatg tttaaaggtg gtatgttttt gacactcctc gg
//
LOCUS       DASQSL010001222         2004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_23610, whole genome shotgun sequence.
ACCESSION   DASQSL010001222 DASQSL010000000
VERSION     DASQSL010001222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2004
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23610"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            263..>2004
                     /locus_tag="VE844_12600"
     CDS             263..>2004
                     /locus_tag="VE844_12600"
                     /inference="COORDINATES: protein motif:HMM:NF014731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HZC02155.1"
                     /translation="MRRLDGARRVRSDQPTAHGHNMVSVAFALLVVQACGVVYGDIGT
                     SVLYTLREMFFGAHTFGHVPIMRDHVIGAVSLIFWALLLLVTLKYALFVLYADHHGEG
                     GVFALIGLLQDAKFLGARILMGMLILSAGLLYGEGLITPAISILSAVEGLEYMTDRFS
                     PYVVWLSAGILVALFAVQRKGTARVGLWFGWCTLVWFFSIGMIGVLQVWRHPEILLAV
                     NPWYGIAFLKTLGWSTSLVVLGFVTLAVTGCEAMYADMGHFGRLPIQVGWLGLAYPCL
                     LLNYGGQGAFLLGQLEDGVSLQPMLHLFYATFNDIVPGTGPLLLMVGLATLATIIASQ
                     ALISGAYSLTAQAIALGYGGRMAITHTSEEHEGQIYIRTLNWLLCAGCLVLIFAFRSS
                     SNLAAAYGLAVSGVMLNTSISMIAVATVRWRWSVVRAVMLFGLFACIEGTFLLANSLK
                     FLQGGFLPLIVGIGLFVAMSNYRWGRLSLLAPAYAAYATTRDMRWFLALKQRVIDHGG
                     VLHEHTRDLKEAERTDVFMTSRPVSKETDGVPVILRAYLKRHGTVAKHLLLLTIDQQH
                     LPVIAPAQQYDITP"
BASE COUNT          367 a          521 c          602 g          514 t
ORIGIN      
        1 cagatgagga aaccggctgg attgatgcgc gattgcagga gatcaaacag acaggctggc
       61 ggggggtgac gcgttctgcg tttatccgct cactgatacg aacgatgatg caacgctccc
      121 ttgatgtgag cggcgtcacc agtgaagggg agttagcaca acgactgcgc ctcagataac
      181 cataccgcca tactacagca tgatcatact gtgatgcgat gtcccatcgt gacacgtctg
      241 ttctgatctg aaaggaagag cgatgagacg gcttgatggc gcgagacgtg tacgatctga
      301 ccagccgacg gcccatgggc acaacatggt gagcgtggcg tttgcgctcc tggtcgtgca
      361 agcctgcggg gtggtctatg gcgatattgg gacctccgtc ctctacaccc tccgggagat
      421 gttctttggg gcccacacgt tcggtcatgt gccgatcatg cgggaccatg tcattggcgc
      481 cgtctcgctg attttctggg cactgctcct gctggttacc ctcaagtatg ctctctttgt
      541 gttgtatgcc gaccatcacg gcgagggtgg cgtgtttgcc cttatcggtc tactacagga
      601 tgccaagttt ctcggggcta ggatactgat gggcatgctc attctgtcgg cggggctctt
      661 atatggcgaa gggctgatta cgcctgcaat atcaattttg tcggctgtcg aaggattgga
      721 gtacatgacg gatcggttca gcccctatgt tgtgtggcta tcggcgggga ttctcgtggc
      781 actgtttgcg gtacaacgca aagggacagc cagagtagga ttgtggtttg gctggtgtac
      841 attggtgtgg ttcttcagta tcgggatgat tggggttctc caggtctggc gacatccgga
      901 gattcttctc gcggttaacc cctggtacgg cattgccttt ctgaaaacct tgggatggtc
      961 aaccagtctg gtcgtcttag ggtttgttac gttggcggtc accggctgtg aagccatgta
     1021 tgcggacatg gggcactttg gtcgtctgcc gatccaggtg ggctggctgg ggttggccta
     1081 cccctgtctg ctcctcaact acggtgggca aggcgccttt ttgctcgggc agcttgagga
     1141 cggcgtgtcg ttgcaaccaa tgttgcacct cttctatgcg accttcaatg atatagtgcc
     1201 agggactggc ccgctcctcc tcatggtggg cctggcgacc ctggcgacca ttattgcgag
     1261 ccaggcgctg atctccggag cctactcact cacggcgcag gcgatcgcgc tgggctatgg
     1321 cggacggatg gccattactc acacaagtga ggaacatgaa ggacagattt atattcgcac
     1381 gcttaattgg ttgctatgtg ctgggtgtct ggtattgatc tttgcttttc gctccagttc
     1441 aaacctagcc gctgcgtatg gtcttgccgt ttcgggggtc atgctcaata cctcaatatc
     1501 tatgattgca gtggcgactg tgcgctggcg atggagtgta gtgcgggcag tgatgctctt
     1561 tggcttgttt gcctgtattg agggaacgtt tctcttggca aatagcttaa agtttttaca
     1621 gggagggttt cttccgctta ttgtaggaat tggtctcttt gtggccatgt ccaattatcg
     1681 ctggggccgc cttagcctgc tggccccggc gtatgccgcc tatgccacca ccagagacat
     1741 gcgctggttc ctcgccttga aacagcgcgt gattgaccac ggtggggtgt tgcacgagca
     1801 cacccgtgat ctgaaagagg cagaacggac ggatgtcttc atgacctcgc gtcccgtctc
     1861 gaaggagacc gacggggtcc cagtcatcct gcgggcctat ctgaagcggc atggcacggt
     1921 ggccaaacat ctcctcctgc tcaccatcga ccagcaacat ctccccgtca tcgcgccggc
     1981 acagcagtat gacatcaccc cctt
//
LOCUS       DASQSL010001223         3331 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_89562, whole genome shotgun sequence.
ACCESSION   DASQSL010001223 DASQSL010000000
VERSION     DASQSL010001223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3331
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89562"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..340
                     /locus_tag="VE844_12605"
     CDS             <1..340
                     /locus_tag="VE844_12605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015231461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02156.1"
                     /translation="RLNATFRSALAPLARRGRAIAHTEAVLTAGMYSLGCAYNFCWYH
                     DSFRLAAPKNAPRKWQERTPAMAAGLTDHPWTLRELLLLKVPLPPWIASKRRGRPPQQ
                     KLQPIMAMAA"
     gene            complement(363..1769)
                     /locus_tag="VE844_12610"
     CDS             complement(363..1769)
                     /locus_tag="VE844_12610"
                     /inference="COORDINATES: protein motif:HMM:NF019042.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OprO/OprP family phosphate-selective porin"
                     /protein_id="HZC02157.1"
                     /translation="MRDKKILSLFSAASLGCATIASAPALAGNEAMLELLKVLRDNGT
                     ITRQAYEQLANAARADEEKNTEGQAEIKQAVSNLPKIDTKGKLEISSPEGDFKWRLGG
                     RIHTDAAFYDNDTSTTGEPTGLDSGADIRRARLALKGTLWRNWLFEIEYDFAESGEID
                     EGLRDAYLRYLLKIPQPFAFTAGQFKEYLGLESWSSANDLTFIERALPSRAFSPPSAR
                     RLGVGVSTYGHDLWTLSAGTYGKNASGEDIGGVEIEDDPDPLVFVGRLTFSPLHTETR
                     VVHLGASGSWLDSGNNLVEFREQPEADIGAERLIDTGEFDADTITRYGVEALAIYGPF
                     SLQGEYLLAHVNRELPGEPDVSFPGWYVYGSWVLTGESRGYEFEEGEFKNPKPRGVVG
                     KGGIGAWEIAARYSSLNLNDEDIEGGKEKNFTAGLNWYPTPNFKFMTNYVKILDIQGG
                     EFDGAEPDIVEFRAQVYW"
     gene            1934..2878
                     /locus_tag="VE844_12615"
     CDS             1934..2878
                     /locus_tag="VE844_12615"
                     /inference="COORDINATES: protein motif:HMM:NF024376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate/phosphite/phosphonate ABC transporter
                     substrate-binding protein"
                     /protein_id="HZC02158.1"
                     /translation="MKHASTSQFSKPPAMDGLPARFRFLLFAALVFLVPQVTWAGPIT
                     IGSIHIEPAHEVKKFLPLARYLAKQLQSEGIDQGRVVVVESIPQMAALLREGKADLYI
                     DSPFTSVAVSRFSGSKFLLRRWKKGLGEYHTVIFVRKDSGVSRLADLKGKMIAFEEPS
                     SSSGYFLPKMVLVQKGLKLAPKRETTDPVGPDEVGYVLSYLDETTMVWVLRRKVSAGA
                     MDNQNYPKEAKGNLNSLKSIYETFSIPRQIVSYRADLPPKLVARIKEILLKMDQSEEG
                     RKALQEFERTAKFDEIPDQAMAPLLKSMKFIEAELGLQ"
     gene            2875..>3331
                     /locus_tag="VE844_12620"
     CDS             2875..>3331
                     /locus_tag="VE844_12620"
                     /inference="COORDINATES: protein motif:HMM:NF028512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE sensor domain-containing protein"
                     /protein_id="HZC02159.1"
                     /translation="MKLNLRLKLVIFTFCVVLAVGGTISLYSTYQGRQRILTTFEKEY
                     QKTAAMIAEIVTNEVYFLDLLSLRRRLENARVNPDISYTYVTDVEGVVLADGTEENAL
                     RDQKLTDPLSMELLISNDWRSRIEGAILKIGGPILMADGSRIGYLHVGFS"
BASE COUNT          717 a          943 c          927 g          744 t
ORIGIN      
        1 gcggctcaat gccacctttc gcagcgccct ggcgcccctg gcgcgccgag gacgcgccat
       61 cgcccacacc gaagcggtgc tgaccgccgg gatgtattct ctcgggtgtg cctacaactt
      121 ctgctggtat catgacagct ttcggctggc agcgcctaaa aacgcacccc gtaagtggca
      181 ggagcggacc cctgccatgg ccgcaggcct aacagaccac ccttggaccc tgcgtgagct
      241 gttgctactc aaggtccccc tgcccccttg gattgcatcc aagcgccgag gacgtccacc
      301 ccagcagaaa ctgcaaccaa taatggcaat ggcagcgtga ccatggttaa atgtggagct
      361 acctaccagt acacctgggc gcggaattcg acgatatcgg gctcggcgcc atcgaattca
      421 ccgccctgga tgtccaggat cttcacgtag ttggtcatga acttgaagtt gggcgtggga
      481 taccagttca ggccggcggt aaaatttttc tccttgccgc cctcgatatc ctcgtcgttc
      541 agattaagcg agctgtagcg cgctgcgatc tcccaggcac cgatcccgcc cttgccaacc
      601 acccccctgg gcttgggatt cttaaattct ccttcctcga attcataccc ccgagattcg
      661 cccgtgagaa cccagctgcc atacacatac cagccgggga agctcacgtc cggctcgccg
      721 ggcagctccc ggttgacgtg ggcgaggaga tactcgccct gcagcgagaa ggggccgtag
      781 atggcgaggg cttctacccc gtagcgggtt atcgtatcgg catcaaactc gccggtgtcg
      841 atcagccgct cagcaccaat atccgcctcg ggctgctcgc ggaactccac aaggttgttg
      901 cccgagtcaa gccaggagcc tgaagcgccc aggtgcacaa cgcgcgtttc cgtatggagg
      961 ggcgaaaatg tgaggcggcc gacaaagacc aagggatcgg ggtcgtcctc tatctccacc
     1021 cctccaatat cctcgcccga ggcgttctta ccataggtgc ctgccgagag tgtccagaga
     1081 tcatggccgt aggtgctcac ccccaccccg agccggcgcg cactcggagg gctgaaggct
     1141 cggctgggca gggcacgctc gatgaaggtg aggtcgttgg cactgctcca gctctcaagc
     1201 cccaggtatt ccttgaattg gcccgccgtg aaggcaaagg gctgggggat cttgagaaga
     1261 tacctgagat aggcatcccg caggccctcg tcgatctcgc cgctctcggc aaagtcgtac
     1321 tcgatctcaa acagccagtt ccgccacagg gtgcccttaa gggccaggcg ggcgcgccga
     1381 atgtcggcac cgctatcaag gccagtgggc tcccccgtag tgctcgtgtc gttatcgtag
     1441 aaggccgcat ccgtgtggat acgtcccccg aggcgccact tgaagtcgcc ttccggggat
     1501 gagatctcca gcttgccctt ggtatcaatc ttgggtaggt tgctcaccgc ctgcttgatc
     1561 tcggcctggc cctcggtgtt cttctcctca tccgccctgg ccgcattggc taattgttcg
     1621 taggcctgcc gagtgatcgt gccgttgtcc cgcaagactt tgagcagttc gagcatggcc
     1681 tcgttgccag caagggctgg tgccgaagcg atcgtcgcgc accctagaga ggcagcgcta
     1741 aacagcgaca agattttctt atccctcata acaagacccc tcctaaagct gatgaatggt
     1801 tttttgcatc ccgaggcagg agaacagact atactactta ccatatattt attcagcggc
     1861 cgcttaacca gcaccgtaat tgtccatacc tcgtctagct ccaaaatatg cgacacaacc
     1921 ggaggatatg ccgatgaagc acgcgagcac ttcccagttc tcaaaacctc ccgctatgga
     1981 tggcctccct gcgcgcttcc gcttcctctt gtttgcagcc ctcgtgtttc tcgtgcccca
     2041 ggtgacgtgg gctggaccga ttaccatagg ttccatacac attgagccgg cgcacgaggt
     2101 caaaaaattt ctgccccttg cgcgctatct tgccaagcag ctccagtcag aggggatcga
     2161 ccagggaagg gttgtcgtgg tggaaagcat tccccagatg gccgccctct tgcgggaggg
     2221 aaaggccgat ctctatattg acagtccttt tacttcggtg gcggtcagcc gcttctccgg
     2281 gagcaaattt ctccttcggc ggtggaagaa agggcttggc gagtatcata cggtgatctt
     2341 cgtgagaaag gatagcggcg ttagccgatt ggcggatctc aaggggaaga tgattgcctt
     2401 tgaagaacct tcctcttctt cggggtattt cctccccaag atggttttag tgcagaaggg
     2461 attgaaattg gcgcctaaga gggagactac tgatcctgtg ggtcctgatg aagtgggcta
     2521 tgtattgagt tatcttgatg agactacaat ggtgtgggtg ttaaggcgaa aggtgtcggc
     2581 gggggcgatg gataatcaga attatccgaa ggaagcgaag ggaaacctga acagcttgaa
     2641 gagcatttat gagacatttt ctattccccg ccaaatagtc agctatcgag cagacctccc
     2701 tcccaaactt gtggcgagaa ttaaggaaat cttactcaag atggatcagt cggaggaggg
     2761 aaggaaagcc cttcaagagt ttgagaggac ggccaagttc gatgaaatcc ccgaccaagc
     2821 catggcccct ttgttaaaat caatgaaatt tattgaggct gaattggggc tccaatgaaa
     2881 ttgaatcttc gcctcaagtt agttattttt acattttgtg tcgtccttgc ggtggggggc
     2941 actatctctc tttattccac ctatcaggga cgacagcgga tccttaccac gtttgagaaa
     3001 gagtaccaga aaacagcagc catgatcgcc gagatcgtga cgaatgaggt ctattttctc
     3061 gatctccttt cactgcgccg ccgattagaa aatgcccggg tcaaccctga tatcagctat
     3121 acctatgtca cagatgtgga aggggtggtg ctggctgacg gcaccgagga gaatgccctg
     3181 cgcgatcaga aactcaccga tcccttgagc atggaactcc tgatttcgaa tgattggaga
     3241 tccaggatag agggggcaat cctcaagatt ggcggcccaa ttcttatggc cgatgggagc
     3301 cgtatcggat atcttcatgt gggattttcg c
//
LOCUS       DASQSL010001224         1063 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_146377, whole genome shotgun sequence.
ACCESSION   DASQSL010001224 DASQSL010000000
VERSION     DASQSL010001224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146377"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..559)
                     /locus_tag="VE844_12625"
     CDS             complement(<1..559)
                     /locus_tag="VE844_12625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02160.1"
                     /translation="MAGLKIGFIVERRYLRQEMPGAVIRCLKARGVASAIICPQNYRF
                     EPERGLLRGEDGVEIDLNRYDVLVSRNRNALGLAMLSYADAAGIPAINTHASTQGVRN
                     KAKMAIALGRAGVPCAPTVLANDISVLAELPRDWFPLILKATYGDNSQGLRLIRHPEE
                     LGDLHWNDALVLAQHYLPNDGFDLKL"
BASE COUNT          217 a          289 c          345 g          212 t
ORIGIN      
        1 agagcttcag gtcgaagccg tcgttgggca ggtagtgctg ggctagaacc agagcatcgt
       61 tccagtgaag gtcccccagc tcctccggat ggcggatcag ccgcagacct tgactattgt
      121 caccgtaggt ggctttcagg atgagcggga accagtcccg tggaagctcg gcgaggacgg
      181 agatgtcgtt ggccaggacg gtgggcgcgc aagggacacc tgcccggccg agggcgatgg
      241 ccatcttggc cttgtttcgg acaccctggg tcgaggcatg cgtgttgatg gccgggatgc
      301 ctgcggcatc ggcataagag agcatggcca gaccgagggc gttgcggttt ctggagacga
      361 ggacgtcgta gcggttcagg tcgatctcga cgccgtcttc gccacgcaat agccctcgtt
      421 cgggctcaaa acggtagttt tgcggacaga tgatggcgct cgcaacacca cgggctttga
      481 gacaacggat caccgcccca ggcatctcct gcctgagata gcgtcgctcg acgataaagc
      541 cgattttcaa gccagccata ttcatccccc agtcgtccct gaagcgtcgc ggaaagtgac
      601 gttgacatga agccggcgcg ggagaccgga aagcgccatg ccgctccggc gccgccgacg
      661 acaatcttgt cctggagtga ttgattggcc atgtcactat ctccttgact gtcgcttggg
      721 ttcgctcaac aacacgtcca tcgtccgcgc gtcacgcgct attgtttctg cgtacacaga
      781 gagttgggac ttcatctcaa gccgatggtt tattgctgag ggaaagggat ggatcggcgg
      841 atgtccctcc tcgtcaggag gggttagatg cgagtcggga gttggggtct ccagagaaag
      901 cgggagtgca cagggatgca ggccatcagc ggagacgtga acgctgggaa acgcttaacg
      961 acctgcatgg acctactcct cgcccatggc cagatcggcc gtgacagcat cggtggcaac
     1021 agcgtgaaca gcaggaatga ggaaattgtc tgtttgtgta cca
//
LOCUS       DASQSL010001225         1522 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_62795, whole genome shotgun sequence.
ACCESSION   DASQSL010001225 DASQSL010000000
VERSION     DASQSL010001225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62795"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            127..1032
                     /gene="dapA"
                     /locus_tag="VE844_12630"
     CDS             127..1032
                     /gene="dapA"
                     /locus_tag="VE844_12630"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007042837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HZC02161.1"
                     /translation="MFQGSIVAIVTPMHTGVAAAVPIDWEALRQLVESHISQGTDAIV
                     AVGTTGESATLNEEEHCQVIGAIVAQVNGRIPVIAGTGANSTTEAIRLTEYAKQAGAD
                     ACLLVTPYYNKPTQEGLYRHHKAVAEAVAIPQILYNVPGRTACDMVPETVGRLSQVAN
                     IIGIKEATGDLGRIAELRERCGDRFLLVSGDDASAMEFMLQSGHGVISVTANVAPQAM
                     HELCAHALAGDRRGAERINAHLLGLHKELFAESNPIPVKWALNRMGLIQAGIRLPLTW
                     LSAACQSRVQHAMEHAHIRCPGAGN"
     gene            1053..>1522
                     /gene="bamC"
                     /locus_tag="VE844_12635"
     CDS             1053..>1522
                     /gene="bamC"
                     /locus_tag="VE844_12635"
                     /inference="COORDINATES: protein motif:HMM:NF018509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HZC02162.1"
                     /translation="MSRYLIVGVLLSGFMLGGCGMDKVLPDKQQEYKKSRSLPDLEVP
                     PDLSSESINDTMAVPEVDAKGTATFSTYQQRIAVRGKTGAGDPGGAAGGSRGSGEKVL
                     IVNSSLPELWPWLRSFWTERGYVVRSDDQEHGVLETDWHENRVDLTRDRFKVTIT"
BASE COUNT          346 a          389 c          467 g          320 t
ORIGIN      
        1 caaatcgcgt gctacaatcc ggacagttta tttgctctct acagccatgc ttgtcaatcc
       61 ttccgtggaa acgtactatg ggaatgaata aatatccata cctcgaaata aggggaaact
      121 aagctcatgt ttcaaggcag catagtcgcg attgtgacgc ccatgcacac gggggtggct
      181 gccgctgtcc ccatcgactg ggaggcattg cggcaactgg ttgaatctca tatcagccaa
      241 ggcaccgatg cgatcgtggc ggtaggcacc accggcgagt cggctacgct caatgaagag
      301 gagcattgcc aggtgatcgg tgcgatcgta gcgcaggtga atggccgtat cccggtgatt
      361 gccggtaccg gtgccaattc caccaccgag gccatccgtt tgacggagta tgcgaagcag
      421 gcgggcgccg atgcctgtct cttggtcaca ccttattata ataagcccac ccaagagggc
      481 ctgtatcgcc atcacaaggc cgtggccgag gctgtggcta taccgcagat cctctacaat
      541 gtgccgggac ggacagcctg cgatatggta cctgaaacgg taggccgttt atcgcaggtg
      601 gccaatatta tcggcatcaa agaggctacc ggggatctcg gccggatcgc ggagttacgc
      661 gagcgctgcg gggataggtt tctgttggtg agcggcgatg acgctagcgc gatggagttc
      721 atgctccaaa gcggccacgg ggtgatctcg gtaaccgcaa atgtagcgcc ccaggcgatg
      781 cacgagctgt gtgcgcacgc cctggcgggg gatcgccgag gggctgagcg catcaatgca
      841 catttgctcg gattgcataa ggaattattc gccgagtcca atccaatccc ggtcaaatgg
      901 gcgcttaatc gaatgggatt gatccaagcg ggtatccgtc tgccgctgac atggttgtcg
      961 gcggcctgtc aatcacgggt ccaacacgcc atggagcacg cacacatacg ttgcccaggt
     1021 gctggaaatt aattaggcaa gggtttctca cgatgtcacg ctatcttata gtaggagtgt
     1081 tgctgagcgg gtttatgctc gggggctgcg gtatggacaa ggtcctgccg gataaacagc
     1141 aagaatacaa gaaaagccga tcactgcctg atcttgaggt tccgccggat ctctcctcgg
     1201 agtctatcaa tgatacgatg gctgtgcctg aggtcgacgc aaaggggacg gctacctttt
     1261 cgacctatca gcagcgtatc gctgtaagag gtaagacggg agccggcgat cccggaggag
     1321 cagcgggggg ttcaaggggg tccggtgaaa aggtactgat agtcaatagt agccttccgg
     1381 aactttggcc atggttgcgc agcttctgga ccgaacgcgg ctatgttgta agatccgatg
     1441 atcaggaaca cggcgtcctg gagacagact ggcatgagaa tcgcgtcgac ctcacgcgcg
     1501 ataggttcaa ggtgacgatc ac
//
LOCUS       DASQSL010001226         1052 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_62804, whole genome shotgun sequence.
ACCESSION   DASQSL010001226 DASQSL010000000
VERSION     DASQSL010001226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62804"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..356)
                     /gene="bamC"
                     /locus_tag="VE844_12640"
     CDS             complement(<1..356)
                     /gene="bamC"
                     /locus_tag="VE844_12640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HZC02163.1"
                     /translation="MQDQGAFLFPRFNRHLEPIAREVDAKGTATFSTYQQRIAVRGKT
                     GDGDPGGAAGGSRVSSEKVLIVNSSLPELWPRLRSFWTERGYVVRFDDQEHGVLETDW
                     HENRVDLTRDRFKVTIT"
     gene            399..545
                     /locus_tag="VE844_12645"
     CDS             399..545
                     /locus_tag="VE844_12645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02164.1"
                     /translation="MVWQKRARDGALEERIATSLKYYLGKGSVKVQSLQDAHWLHADE
                     DDGA"
     gene            532..1052
                     /locus_tag="VE844_12650"
                     /pseudo
     CDS             532..1052
                     /locus_tag="VE844_12650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_319006093.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PCRF domain-containing protein"
BASE COUNT          248 a          275 c          310 g          219 t
ORIGIN      
        1 gtgatcgtca ccttgaacct atcgcgcgtg aggtcgacgc gattctcatg ccagtctgtc
       61 tccaggacgc cgtgttcctg atcatcgaat cttacgacat agccgcgttc ggtccagaag
      121 ctgcgcaacc gtggccaaag ttccggaagg ctactattga ctatcagtac cttttcactg
      181 gatactcttg aaccccccgc tgctcctccg ggatcgccgt ctcccgtctt acctcttaca
      241 gcgatacgct gctgataggt cgaaaaggta gccgtcccct ttgcgtcgac ctcacgcgcg
      301 ataggttcaa ggtgacgatt aaacctggga aacaggaagg caccttggtc ttgcatttgg
      361 ctcatagcgg cgaagaaatg aaaccccagg gtgaaaggtt ggtctggcaa aaacgggcac
      421 gggatggcgc gctggaggag cggatcgcca ccagtctcaa gtattatctg ggcaagggat
      481 cggtgaaggt tcaatcgctc caggatgccc attggctgca tgcagacgaa gatgatggag
      541 cttaatctct ctattttcac ccgccttaaa gatatgcaag ggcgagtagc ggccttgagg
      601 aggtatcttt gactatgagg gtaaacgcga acggctcaca gagctcgtgc gtgaattgga
      661 agcgccgaac ctatggaatc aacccaccag ggcccagcaa ttagggaaag aacgcgcagc
      721 cttggaacag gttatccata acctcgacag cctcgagcag gggatcaggg aggcggctga
      781 attgcttgag atcgccgaga tcgagcagga tcagggcact gcccaagcgg tagcgagtga
      841 tgtcgaaacc ctcgagcggc agctcagcga tatggagttc cgtcggatgt tcccaggcca
      901 gatggaccct aacaatgcct tcctcgatat ccaggcaggg tctgggggta ccgaggccca
      961 ggattgggcg gagatgctgc tcagaatgta tctcaagtgg ggcgatcgcc atcaattcaa
     1021 gactgaattg atggaggtgt cgccggccga ag
//
LOCUS       DASQSL010001227         1235 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_114644, whole genome shotgun sequence.
ACCESSION   DASQSL010001227 DASQSL010000000
VERSION     DASQSL010001227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114644"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..605)
                     /locus_tag="VE844_12655"
     CDS             complement(<1..605)
                     /locus_tag="VE844_12655"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HZC02165.1"
                     /translation="MQSLPPTSAHQEFPQLQRLPFFSPANQGIVAAYLAHLRARHYAP
                     AMQEGTIRALKSFAVLMPEARRIALYQDLTQTSPDDIDAWIEASFQQRLAPGTIATRL
                     RVVQGFFAFLRDQGYITQSPIRLPRHHILVPQDLPRPMAEDEVVAFFRVIDALRDRTM
                     FLLMLRCGLRVGEVSRLCWSAIALTQGTVRIENSKGHVDRVV"
     gene            830..>1235
                     /locus_tag="VE844_12660"
     CDS             830..>1235
                     /locus_tag="VE844_12660"
                     /inference="COORDINATES: protein motif:HMM:NF014898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HZC02166.1"
                     /translation="MSETRAGQQPLTLEKGVAIFLDGLSGKNRSQATIRAYHTDLLQF
                     ITFLHETNVLIETPQNVQKIDILEYFSHLAKKALTGVARARKMSAIREYFRFLEGVGQ
                     IDKSPTTGVETPKRERNTRQFLRSDEYTKMLSL"
BASE COUNT          279 a          337 c          368 g          251 t
ORIGIN      
        1 accacgcgat cgacgtgccc cttgctgttc tcaatgcgga cggtgccctg cgtcagggcg
       61 atggccgacc agcataagcg gcttacttcg cctacgcgga ggccgcagcg cagcatgagc
      121 agaaacatcg tgcggtcgcg cagggcatca atgacccgaa agaacgcgac gacctcgtct
      181 tccgccatcg ggcgggggag gtcctggggc acgaggatgt gatggcgtgg gagccgaatg
      241 ggggactggg ttatatatcc ctggtcgcgc aggaaggcaa agaaaccctg caccacgcgc
      301 aggcgggtcg cgatcgtgcc gggagccaat cgttgctgaa aggaggcctc gatccacgcg
      361 tcgatatcgt cgggactggt ctgtgtcagg tcctgataga gagcgatccg gcgcgcctca
      421 ggcatgagga ccgcgaagct tttgagcgcg cggatggtcc cttcctgcat ggcgggggca
      481 tagtggcggg cgcgcaggtg ggccagatag gcggccacta tgccttgatt ggcgggactg
      541 aagaacggca accgctggag ctgcgggaac tcttggtgtg ctgaggtggg cggtagactt
      601 tgcatccctc tctccttctc tatgagccac ggtctcccgt ggacgatacg gagttgagag
      661 aagattgtct acataaccac tattcccggt accgcaccca aaaacctgcg ccttgacagc
      721 catggataat gattccgtat aatacgaaaa gaggtatgtt atcggaacca cttttcaccg
      781 cctgcctgct cttgtcgatt gttcattcgt atgagaaagt aggtaggcta tgagcgagac
      841 aagagctgga cagcaaccac tgacacttga gaagggcgtc gcgatcttcc ttgacggtct
      901 gtcggggaag aatcgaagcc aggcaacaat ccgtgcctat cacacggatc tgctgcaatt
      961 tattaccttt ctgcatgaaa ccaatgtcct gatcgagact ccacagaatg tgcagaaaat
     1021 cgatatcctt gagtactttt cccaccttgc caagaaagcc ttgaccggcg ttgccagagc
     1081 ccgaaagatg tcagcaattc gagaatactt ccgttttctc gaaggggtcg ggcagattga
     1141 caaatctccg accaccggag tggagacccc caagcgggag cgcaataccc gccagtttct
     1201 gcgctctgac gaatacacca aaatgctctc gcttg
//
LOCUS       DASQSL010001228         1280 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_114659, whole genome shotgun sequence.
ACCESSION   DASQSL010001228 DASQSL010000000
VERSION     DASQSL010001228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1280
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114659"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..499
                     /gene="lptE"
                     /locus_tag="VE844_12665"
     CDS             <1..499
                     /gene="lptE"
                     /locus_tag="VE844_12665"
                     /inference="COORDINATES: protein motif:HMM:NF016290.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0043165 - Gram-negative-bacterium-type cell
                     outer membrane assembly [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HZC02167.1"
                     /translation="MPGLVVAAFLVILAAPGCGFHFRGTRSVELQVAKVFVESQAANQ
                     ISAEVKRQLDYSGVALASELGTADAIVRLGNERFDRRVLSVDPRTGKVREFELGYAVD
                     LNVTHRDGRSLIGPDTVTLLRDHVFDETAAISEFEEENLLREEMKKDAAEAILRRLQT
                     IKLNR"
     gene            527..>1280
                     /gene="holA"
                     /locus_tag="VE844_12670"
     CDS             527..>1280
                     /gene="holA"
                     /locus_tag="VE844_12670"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR01128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HZC02168.1"
                     /translation="MRLRSDQLQSSLSRQGLVPLYLISGDEPLQVMEAVDRIRTYARG
                     QRIDEHSVLRVEPGFDWQILSHEASTISLFGVRRLIELRLGAQEPGAEGSNALTAYAE
                     RLHTDTILLISTGKLAKKTQQSTWFKAVEKAGVVIQVWPVEQEALPQWIMRRSEANGL
                     NLTPDAAAFIAARVEGNLLAASQEIDSLALLVDGKKRMIDVEEISLAMVDNSRYDVFT
                     WVDRAFAGELVRSLQILHSLRHEGIEPAAINGV"
BASE COUNT          284 a          335 c          384 g          277 t
ORIGIN      
        1 gatgccgggt ttggtggtgg ccgccttcct agtgatcctg gcagcgccgg gctgtggctt
       61 ccatttccgc ggtactcgat cggtggaatt acaggtagcc aaggtctttg tcgagtctca
      121 ggcggccaat cagataagcg ccgaggtaaa aaggcaattg gattatagcg gtgtcgccct
      181 agcctctgag cttggtacag ccgatgctat agtgagactt ggcaatgagc gattcgatcg
      241 gcgggtcctg tccgtcgacc cgcgcaccgg caaggtacgt gaattcgaac tgggttacgc
      301 cgtggatctt aatgtgactc accgggatgg acgctcattg atcggcccag acaccgtaac
      361 cctactgcgg gatcatgtct ttgatgaaac cgccgcgatc agtgagttcg aggaagaaaa
      421 tttattacgt gaagagatga aaaaagatgc cgcagaggcg atattgcggc gcctgcaaac
      481 tatcaagctg aaccggtaaa tagaggttct ccttcggtta ccccgcatgc gattgcgatc
      541 cgatcaactc caatccagtc tctcccgaca gggtcttgtc cctttgtatc tcatcagcgg
      601 tgatgaacct ttgcaggtga tggaggcggt cgataggatc cgtacctacg cccgcggcca
      661 gaggatcgac gagcatagtg tgctcagggt ggaaccaggt tttgactggc agatcctgag
      721 ccatgaggcg agcactatct cactcttcgg agtgcgccgc ttaatagaac tgcgcctggg
      781 tgcgcaagaa cccggtgcag aggggtcgaa tgccttgacc gcctatgcag aacgtctcca
      841 tactgacacc attctgctca ttagcaccgg gaagctcgcc aaaaagaccc agcagagcac
      901 ctggttcaag gccgtagaga aggccggcgt ggtcatccag gtatggcccg tggagcaaga
      961 agccttgccc cagtggatca tgcgccggtc agaggctaac ggcttgaatc tgacccccga
     1021 tgccgctgcc tttattgccg cacgggttga aggcaatctg ctcgccgcca gtcaggagat
     1081 cgatagcttg gcgttactcg tggatggaaa aaagaggatg atcgatgtcg aagagataag
     1141 cctggcgatg gtcgataaca gccgctacga cgtgttcacc tgggttgacc gtgcctttgc
     1201 gggcgagctt gtccgtagcc tacagatctt gcacagtcta cgtcatgagg ggatcgagcc
     1261 ggcggcaatc aacggggtct
//
LOCUS       DASQSL010001229         1249 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_187395, whole genome shotgun sequence.
ACCESSION   DASQSL010001229 DASQSL010000000
VERSION     DASQSL010001229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1249
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187395"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..434)
                     /locus_tag="VE844_12675"
     CDS             complement(<1..434)
                     /locus_tag="VE844_12675"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HZC02169.1"
                     /translation="MATEQKYKHWHSEVDGNRIVWLHLDQQGTTTNVLSSEVLQELKG
                     VLEELEVTPDRKPRGLVILSAKPNGFIAGADVHEIAAIQDADQALDLIRTGQSIFNRI
                     ESLPFPTLALIRGFCVGGGLELALACRYRVALNHPQTRLGLP"
     gene            complement(464..>1249)
                     /locus_tag="VE844_12680"
     CDS             complement(464..>1249)
                     /locus_tag="VE844_12680"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011237130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HZC02170.1"
                     /translation="RGLTDPIVGLSMGQTAEVLAHRFNISREAMDSFAVRSHKRLAAA
                     QQEGRLGEVEVIYDWQGHAYDKDDGVRPDTDMSALAKLKPAFDREGGKVTAGNSAQVT
                     DGAACLILASEAAIERYQLPVLGRVLDCEWAGLDPSQMGLGPVYATTPLLGRHGFKLE
                     DIDYWEINEAFAAQVLACLEAWKDEAYCRNELGLAAALGALDQERLNVDGGAISLGHP
                     VGTSGARIVLHLLQVLKHNKAHRGIATLCIGGGQGGAMLLESV"
BASE COUNT          279 a          420 c          299 g          251 t
ORIGIN      
        1 tccggcaagc ccaagcgcgt ctgtggatga ttaagagcca cccggtaacg gcaggcaagc
       61 gccagctcca atcccccacc cacacaaaac ccccggatca gcgcgagcgt cggaaaaggt
      121 aaagactcaa tccgattaaa gatggattgt ccagtcctga tcagatcaag ggcctgatcg
      181 gcatcctgga tcgccgcgat ctcatggacg tctgcgcccg cgataaaacc attgggctta
      241 gcggagagga tcaccagccc ccgcggctta cgatctggag tcacctcaag ttcctctaag
      301 acccccttga gctcctgcaa cacttcactc gacagcacat tcgtcgtcgt tccctgctgg
      361 tcgagatgca gccaaacaat cctgtttcca tccacttccg agtgccaatg cttatatttt
      421 tgttctgtgg ccatgggcct tctcctcaat cattaaacga aaatcacacg ctctcgagca
      481 acatcgcgcc cccctgccct cccccgatac acaaggtggc aatacctcga tgcgccttat
      541 tatgttttaa tacctgcaga agatgcagga cgatccgagc accactcgtt ccgacaggat
      601 ggccgaggct tatggcgccg ccatctacat tcagccgctc ctgatcgagc gcgcccaagg
      661 ccgccgctaa gcccaattca ttacggcaat aggcttcatc cttccaggcc tcaaggcaag
      721 ccaagacctg ggcggcaaac gcctcattga tctcccaata atcgatatcc tcaagcttga
      781 acccatgacg gccaagcagc ggggtggtcg catacacagg accgaggccc atctggcttg
      841 ggtccaaacc tgcccattcg cagtcgagga cccgcccaag gaccggcaac tgataccgct
      901 cgatcgctgc ctcactcgcc aggatcaaac aggccgcccc atcggtcacc tgggcgctgt
      961 tgccggccgt tacctttcca ccttcccgat cgaaggcggg cttaagtttc gccaaggcgc
     1021 tcatatcggt atctggtcgg acaccatcgt ccttatcgta agcatggccc tgccagtcat
     1081 atatgacctc gacctcgccg agcctgccct cctgctgagc cgctgcaagc cgtttatggc
     1141 tgcgcaccgc aaagctatcc atggcctcgc ggctgatatt aaagcgatgt gccagcacct
     1201 ccgcggtctg gcccatagat aaacccacga taggatcggt cagtccgcg
//
LOCUS       DASQSL010001230         3091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_89600, whole genome shotgun sequence.
ACCESSION   DASQSL010001230 DASQSL010000000
VERSION     DASQSL010001230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3091
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89600"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..611)
                     /locus_tag="VE844_12685"
     CDS             complement(<1..611)
                     /locus_tag="VE844_12685"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HZC02171.1"
                     /translation="MFTGIIEAVGSIVAIKAGTLDTRLQIGAGTLDLSALKIGESLSI
                     NGVCLTIVGFADKGFCVDVSRETLRCTTLGDLIPGAALNLERALTLASRLGGHLVSGH
                     VDGVGTVVNRASEGQSIRYTLGAPDHLAKYISQKGAICIDGVSLTVNAVRGAEFEVQL
                     IPHTLQKTIAANYRPGTHVNIEVDLIARYIQRLLETSDYIPNTT"
     gene            complement(618..1772)
                     /gene="ribD"
                     /locus_tag="VE844_12690"
     CDS             complement(618..1772)
                     /gene="ribD"
                     /locus_tag="VE844_12690"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020681961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HZC02172.1"
                     /translation="MRLNCGNMAIPSPPADSPTWTGDDYRHMAQAIRLARQGLYSTDP
                     NPRVGCVLAKAGRIVGMGWHRRAGEPHAEVHALTEARERAQGATCYVSLEPCCHYGHT
                     PPCTKALIEAGIMRVIVAMTDPNPAVNGQGLATLSKAGILVESGLLEDQARLLNPGFI
                     KRMETGLPYVRGKIAMSLDGRTATASGESQWITSLESRQDVQRLRAQSSAIMTGIGTV
                     LADDPALTVREAGIATHGREPMRVVLDSQLRLPQGARILKQPGQTLILTRAGDSSKRA
                     SLTSAEIVELPSTQGRVDLRLALQYLAGRQVNEVLLEAGPILTGALLQAELVDELVIY
                     MAPKLLGSNGRGIADLPGLERLADHLALTITEVRKLGVDVRITAKVQGRK"
     gene            complement(1738..2211)
                     /gene="nrdR"
                     /locus_tag="VE844_12695"
     CDS             complement(1738..2211)
                     /gene="nrdR"
                     /locus_tag="VE844_12695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018954032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HZC02173.1"
                     /translation="MRCPFCAEPDTRVIDSRLVDEGERVRRRRECIACKERFTTYEAA
                     ELNLPRVIKSDGRREAFSENKLRTGMLRALEKRPVATEQIEAAVAHIKRQMRASGERE
                     IPSRQIGDWVMEQLRTLDQVAYVRFASVYRSFQDVRAFVDEIKRLETELWQHGNT"
     gene            complement(2283..>3091)
                     /locus_tag="VE844_12700"
     CDS             complement(2283..>3091)
                     /locus_tag="VE844_12700"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002682925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HZC02174.1"
                     /translation="TGLIDYDEAERLALEHRPKLIMTGFSAYSRILDWQRFRTIADQV
                     GAYLVADIAHVAGLVAAGLYPSPIDIADVTTTTTHKTLRGPRSGLIMGKENPEIEKKI
                     NFMVFPAYQGGPLMHVIAGKAVALKEAMQPEYKTYAQQVINNAKTMAQIFIERGLNIV
                     SGGTDNHLFLLDLRTRGLTGKEVDAALGRAHITVNKNAVPNDPHPPFVTSGIRIGSPA
                     ITSRGFKEAESAQVAHWIGDIIDNIKDERTIERIKGEVSKLCRCLPVYGD"
BASE COUNT          619 a          920 c          878 g          674 t
ORIGIN      
        1 gtagtgtttg ggatgtagtc ggacgtctca agaagtcgct gaatgtaccg agcgatgagg
       61 tccacctcaa tattgacgtg ggttccgggc cgatagttcg ctgcaatcgt cttctgtaag
      121 gtatggggaa tgagctgtac ctcaaactca gccccccgga cggcattgac cgtgaggctc
      181 acaccgtcga tgcagatcgc tcctttttgg ctgatatatt tcgccaagtg gtctggggcc
      241 cctagggtgt agcgtatcga ttgtccttcc gatgctcggt ttactacggt tcccacccca
      301 tctacatggc cgctaacaag gtggccgccc aggcggctcg caagcgtgag cgcccgctcc
      361 aaattgagcg ccgcgcctgg aatgagatca cctaaggtcg tgcagcgcaa ggtttctctg
      421 gagacatcca cacagaagcc cttgtcggca aacccaacga tggtgagaca gacgccattg
      481 atgctgagac tttcacctat cttaagcgcg cttaagtcaa gcgtgcctgc cccgatctgc
      541 agtcgcgtat caagcgtgcc tgccttgatt gcgacgatgc tcccaaccgc ttcgatgatg
      601 cctgtaaaca tttaccgtta ctttctacct tgcactttcg cggttatccg cacatcgacc
      661 ccgagcttcc ggacctccgt gatcgtcaat gccagatggt ccgccaaacg ctcaagcccc
      721 ggcagatcgg cgatcccgcg cccgttgctg cccagtaact taggggccat atagatcacc
      781 aattcatcca cgagttccgc ttgcaatagg gcgcccgtta agataggacc cgcttccagc
      841 aagacctcgt tgacctgtct acctgccaga tactgcaagg ccaggcggag atctacccgg
      901 ccttgggtcg agggaagctc cacgatctct gcgctggtga gggaggcccg cttgctgcta
      961 tctcctgccc gggtcaagat taaggtttga ccgggttgct tcaggatccg cgcgccttga
     1021 ggtagccgca actgtgaatc gaggactacg cgcataggct cgcgtccatg ggtagcgatc
     1081 cccgcctcac gcaccgtgag ggcaggatcg tcggcgagca cggtgccgat cccggtcata
     1141 atcgctgagc tttgggcccg taatcgctgg acatcttgcc gggactcaag cgaggtgatc
     1201 cactggctct cgcctgaggc cgtggcggta cggccatcga gactcatagc gatcttaccc
     1261 cggacatagg gcaagcccgt ttccatacgc ttgataaagc caggattgag cagccgcgct
     1321 tggtcctcca agagaccgct ttccaccaag atacccgctt tgcttaaggt agccaaaccc
     1381 tggccgttta ccgcgggatt gggatcggtc atggccacga tcacccgcat gatcccggct
     1441 tcgatcaagg ccttggtgca gggcggggtg tgtccatagt ggcagcaggg ctcaagactc
     1501 acataacagg tcgcaccttg ggcacgttcc cgagcctcag tgagggcatg gacctcggcg
     1561 tgaggttcgc cggcccgtcg atgccaaccc atgccgacga tgcgccccgc tttggctaag
     1621 acacagccga cgcgaggatt aggatcagtg ctatagagcc cctgtcgggc aagacggata
     1681 gcctgtgcca tgtggcggta gtcatcgccc gtccaggtgg gactatcggc tggggggcta
     1741 ggtattgcca tgttgccaca gttcagtctc aagccgttta atctcatcca caaaggcccg
     1801 cacatcctgg aagcttcggt acacggaagc gaaacgcaca taggcgactt gatcaagggt
     1861 acgcaattgt tccatcaccc aatctccgat ctggcgtgag gggatctcac gctctccgct
     1921 cgcgcgcatt tgccgtttga tgtgggcaac agccgcttcg atctgctcag tcgctaccgg
     1981 acgcttttcc aaggcgcgca acatcccggt acgcagcttg ttctcactga atgcctcgcg
     2041 gcggccatcc gatttaatga ctcggggcag gttcaattca gccgcctcat aggtggtaaa
     2101 ccgctctttg caggcgatgc actcccggcg ccggcgcacc cgttcgcctt catccaccaa
     2161 gcgggaatcg atcacccggg tatcgggttc agcacagaac ggacaacgca ttgatgcagg
     2221 ggatagattg cctgccgggg ctgcaacgta cacaagcccg ctcccaacag gatgtcaatc
     2281 gctcaatctc cgtagaccgg gaggcacctg cagagtttgg agacctctcc cttgatccgc
     2341 tcgatagtcc gctcatcctt gatattatcg ataatatcgc cgatccaatg ggctacttgc
     2401 gcagattcgg cctctttgaa tccacggctc gtgatcgccg gcgatccaat gcgaatacca
     2461 ctggttacaa agggcggatg gggatcgttc ggcacggcat tcttattcac ggtgatatgg
     2521 gcacggccta aggccgcatc gacctcttta ccggtgagcc cccgagtgcg caggtccagc
     2581 aggaacagat gattatccgt gcctcccgag acgatattga ggccgcgctc gataaagatc
     2641 tgagccatgg tcttggcatt atttatcact tgctgggcat aggttttata ctcgggctgc
     2701 atcgcctctt tcagcgccac ggccttgccg gcgatgacgt gcatcaaggg gcctccctga
     2761 taggccggga acaccatgaa gttgatcttc ttttcgatct cgggattttc cttgcccatg
     2821 atcagccctg aacgcggacc tcggagggtc ttatgggtcg tggtggtggt cacatcggcg
     2881 atatcgatgg ggctgggata gagcccggca gccacaagcc cggctacatg ggcgatatct
     2941 gcgacgagat aggcgcctac ctgatcggcg atcgtgcgga aacgctgcca gtcgaggatg
     3001 cgggaatagg ctgagaaacc ggtcatgatc agtttaggcc tgtgctcgag cgccagccgc
     3061 tcggcctcgt cgtaatctat aagccctgtg t
//
LOCUS       DASQSL010001231         1316 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_159308, whole genome shotgun sequence.
ACCESSION   DASQSL010001231 DASQSL010000000
VERSION     DASQSL010001231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1316
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159308"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            220..1209
                     /gene="hpnA"
                     /locus_tag="VE844_12705"
     CDS             220..1209
                     /gene="hpnA"
                     /locus_tag="VE844_12705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014415668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hopanoid-associated sugar epimerase"
                     /protein_id="HZC02175.1"
                     /translation="MKTLITGASGFVGSAVLRRLLETGHEVRALVRPSSLRANLEGLT
                     LEIVEGDLNDPASLERALQGCEALYHVAADYRLWTLTPQTLYQNNVTGTRNIMRAAGN
                     AGVKRIVYTSSVATLGLDRAGAPANEDTPVTLEHMIGHYKRSKFLAEAEVRRLVENEG
                     LPVVIVNPSAPVGPRDIKPTPTGRLIRDAAKGQMPAYVDTGLNIVHVDDVADGHLQAF
                     AKGRIGERYILGGEDMTLRQILEALAAITGRPAPRIRLPHNVVLPVAYLSETWARITR
                     RGELRVTIDGVRMAKKKMFFTSAKAKRELGYSPRPALEALRDAVLWFRTNGGF"
BASE COUNT          273 a          372 c          409 g          262 t
ORIGIN      
        1 tgcctcctac gaggaaatag tatatctcat tcgttggaat tgtcgcacca ctataaacag
       61 atgtaggctg ccccaagcac taaatgcata gcgatgatac cggggagact accgtgcggg
      121 gcgaagttcg tgggctacta acgggcttca agagacttgg cttggcagca tttactggag
      181 ccacaggtga tagcttgcgg ctccaagagg taaaagcgta tgaagacact catcacaggc
      241 gcctccggtt ttgtcggttc tgcggtctta cgccgcttgc tggagaccgg gcatgaggtc
      301 cgggccctgg ttcggcccag tagtctgcga gccaacctcg aaggactcac gcttgagatc
      361 gtcgagggcg atctcaacga tccggcctcg ctggagcgtg ctctccaggg ctgcgaggcc
      421 ctttatcacg tggcggctga ctaccggctc tggacgctca cgccccagac tctctaccag
      481 aacaatgtga ccggcacacg caatatcatg cgggcggcgg gtaatgccgg tgtcaaacgc
      541 attgtttaca cgagcagtgt cgccaccctg ggccttgacc gggcgggtgc ccctgctaat
      601 gaagacacac cggtcacgtt agagcatatg atcggtcatt acaagcgctc gaaattcctg
      661 gccgaagccg aggtacggcg cctggtcgaa aacgagggcc tgccggtcgt gatcgtcaac
      721 ccttcggcgc ctgtgggccc gagagatatc aaaccgacgc caacaggccg cctgatccgc
      781 gatgccgcca aaggacagat gcccgcctat gtcgataccg ggctcaatat cgtccatgtc
      841 gatgatgtcg cggacgggca tctgcaagcc tttgcaaagg ggcggatcgg ggagcgttat
      901 atcttgggcg gagaggatat gaccctgcgg cagatcttgg aagccctggc ggcgatcacc
      961 ggccgcccgg cgccgcgtat ccgcttgccc cataatgtgg tgctgccggt ggcttacttg
     1021 agcgagacct gggctcggat cacacggcgc ggtgagctgc gggtaacgat cgatggtgtg
     1081 cgtatggcaa aaaagaagat gtttttcacc agcgccaagg ccaaacgcga gcttggctac
     1141 agtcctcggc cggcgctaga ggcgctgcgc gatgcggtgt tatggttccg cacaaacggc
     1201 ggcttctagc gactcggggg tgcgcctgag ccaattcgtg aggggtgagg agtgaggcgt
     1261 gaggagtaat acccctcacg cctcacgaat cttcacccct cacattgata tagttg
//
LOCUS       DASQSL010001232         1158 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_89605, whole genome shotgun sequence.
ACCESSION   DASQSL010001232 DASQSL010000000
VERSION     DASQSL010001232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89605"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            218..397
                     /locus_tag="VE844_12710"
     CDS             218..397
                     /locus_tag="VE844_12710"
                     /inference="COORDINATES: protein motif:HMM:NF016167.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF433 domain-containing protein"
                     /protein_id="HZC02176.1"
                     /translation="MDLVLEELSHNPDIGELLAAHPDLTRTDVQACLAYAQALVTGEE
                     VSPKPREGGRADAAL"
     gene            394..759
                     /locus_tag="VE844_12715"
     CDS             394..759
                     /locus_tag="VE844_12715"
                     /inference="COORDINATES: protein motif:HMM:NF037832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5615 family PIN-like protein"
                     /protein_id="HZC02177.1"
                     /translation="MKFLFDQSADFRLIPHLRQLGHDVQAISRNYPPGLPDEEVLEIA
                     RKEKRILVVADRDFGELIFQQGLAHAGVIFFRLPGAKLQTKIDQLNTVLEDHADDLAL
                     GEFLVVTPGQIRIAGHPRA"
BASE COUNT          256 a          333 c          304 g          265 t
ORIGIN      
        1 tctggggagg tttagagata ggttcttaga cattaggact tgcgcagttc caaaaaccct
       61 tcccgttttg agcggacaac tgatacgtgt caattgcctc ggtatgctat aatgattgat
      121 aatatatgaa ggaagatcag cgactttacc gagaacgaat cgtcgcggac ccacggattc
      181 tgggggaaag ccagttgtca aggggacgct tatcgccgtg gacttggtgc tagaggagct
      241 ctcccataac ccggatatcg gcgagttgct cgctgcccat cctgatctga cccgtacgga
      301 cgtgcaggcg tgcctcgcat atgcacaggc gcttgttacc ggcgaggagg tctccccaaa
      361 gcctcgtgag ggagggcgtg ccgatgcagc cctatgaaat tcctgttcga tcagagtgcc
      421 gacttcagac ttattcccca ccttcgccaa ctcggacatg acgttcaagc catctctcgt
      481 aactatcctc ctggtcttcc cgatgaagaa gtccttgaaa tagcccggaa agagaaacgg
      541 attctggtcg tcgccgaccg tgatttcggc gagcttatct tccaacaagg actagcccac
      601 gccggcgtca tcttctttcg gctcccagga gctaagctgc aaaccaagat cgatcaactc
      661 aataccgtgc tcgaggacca cgctgacgat cttgcgctcg gcgagtttct ggtggtgacc
      721 cccggccaga ttcgtatcgc aggacatcca cgtgcctaga gcccttttta gaagcccgca
      781 gacgtctctt tctccagtcc ccccgcttgt ccgtctaact aacgtaccgc cctggtgttg
      841 ccttgtcgga aagggtgaga cttcttccgc atagcacagg atgccgtaat gattaagttc
      901 cccgccagtg ccgtaaccct agctctcctc gggctggtct tttctgtccc agcgcacccc
      961 cagcctttgg cactagaggg tattttgcgt tctgagcacc agcagcaggc ccttgagctg
     1021 cgcaggcaac aggagagtac cgcggacgta agggggtgca aaacctatcg cccgctaagc
     1081 aacggcggct ggaagatctc ctttttgagc agcaacttcg gcaagagcag ttacatcaac
     1141 gccagttaaa ggagcaat
//
LOCUS       DASQSL010001233         1612 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_187441, whole genome shotgun sequence.
ACCESSION   DASQSL010001233 DASQSL010000000
VERSION     DASQSL010001233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187441"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..194)
                     /locus_tag="VE844_12720"
     CDS             complement(<1..194)
                     /locus_tag="VE844_12720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02178.1"
                     /translation="MQWPYERNGKVTWGSALLQRLQKVRANCKTRNQLYGNPYMHDFV
                     KHTQKEYARGEVHENRAECL"
     gene            193..660
                     /locus_tag="VE844_12725"
     CDS             193..660
                     /locus_tag="VE844_12725"
                     /inference="COORDINATES: protein motif:HMM:NF024736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02179.1"
                     /translation="MMSTTAPQPATTPIPVQLSEPEFEAFILPHLSMPKRGPKCKLGY
                     YRVFNLILWVLYTGMQWKCLPIPHDTQGKPAIHYTTVYKVFAKWADDGSLWRAFVASV
                     RHLAAEKQLDLSVLHGDGTNTVAKKGAMALASRGTNTRRARRSLLSSTIMALC"
     gene            654..1067
                     /locus_tag="VE844_12730"
     CDS             654..1067
                     /locus_tag="VE844_12730"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02180.1"
                     /translation="MLAPVPVAPVNETDMVLLPEGLQALKKVAKEVGLDLRGAYLNLD
                     GGFDSAHNRKCIFNAGLIPNIPENPRNRKRPKRGRKRLFNAAIHALRMRVERTFAWED
                     KFKRLLLRFERIQRRHYGMKLLAYTLINLRKFCGT"
     gene            complement(1354..>1612)
                     /locus_tag="VE844_12735"
     CDS             complement(1354..>1612)
                     /locus_tag="VE844_12735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007349774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HZC02181.1"
                     /translation="MPSRYAERARQAGFHLIAWTTERSGRIVEDVLEGGNTFYYQTTL
                     DAVINDGDILRTIDALAQDVGIIGLFSDWPATTTFYANCLK"
BASE COUNT          335 a          479 c          460 g          338 t
ORIGIN      
        1 aacaggcact ccgcccgatt ttcatggacc tcaccgcgtg cgtattcctt ctgcgtatgc
       61 ttgacgaagt cgtgcatata ggggttcccg tataactggt tgcgggtttt gcaattggcc
      121 ctaacctttt gtagtctttg aagtaatgcg cttccccagg tgaccttacc attcctctca
      181 taaggccatt gcatgatgag cactactgca ccacagcctg caacgacgcc gattcctgtc
      241 caactctccg aaccggagtt cgaggcattc atcttgccgc acctctcgat gcccaagcgg
      301 ggaccgaagt gcaaactggg ctattatcgc gtctttaacc tcatcctgtg ggtgctctac
      361 accgggatgc agtggaagtg cttgcccatt ccacacgaca ctcagggcaa accggccatt
      421 cactacacga ccgtctacaa agtctttgcc aaatgggcgg atgatggatc gctgtggcgg
      481 gcgtttgtgg ccagcgtgcg gcatctcgcc gcagaaaagc aactcgatct gagcgtgctc
      541 catggcgacg ggaccaacac cgtggccaaa aaaggggcga tggcattggc gtctcggggt
      601 acaaacacca gaagggcgag aaggtcattg ctatcatcga caatcatggc cctgtgttag
      661 ctcccgtccc cgtggctccc gtcaatgaga cagacatggt gctgttgccg gagggcctac
      721 aagcgctgaa aaaggtggcg aaagaggtcg ggttggacct cagaggggcc tatctcaatc
      781 tggatggcgg ctttgattct gcgcacaatc ggaagtgcat cttcaatgcg gggctgatcc
      841 ccaacatccc cgagaatcct cgcaaccgta agcgtcccaa gcgcgggcgc aagcggctct
      901 tcaacgctgc gattcatgcg ttgcggatgc gcgtcgaacg cacctttgcc tgggaagata
      961 agttcaaacg actgctactc cgatttgaac gtatccagcg gcggcattat ggcatgaagt
     1021 tgctggcata cacgttgatc aatctgcgca agttctgtgg tacctgaaac tcgcaaccag
     1081 ttagtgagct gctatggctg ccctatgaca gaccgtagac agagccatga caaaaaacgc
     1141 cagcgagaca ctacctacca gcggagtccc cgaatacgtc gtccctgaca ccggagaggc
     1201 cctctccggg ttggtgctga cgccctcgcc gcctcgtcct ggagtgcatt ccctgctgaa
     1261 cgtgccggcg ggcggtcccg caccccctct tccaccacct gccagcgtgc tccgcgagga
     1321 acaccctgcc gctgcgcccc aagggtggaa tggttatttc aggcagttgg cgtagaaggt
     1381 ggtcgtcgcc ggccaatccg agaacaggcc gatgatgccg acgtcctggg cgagcgcgtc
     1441 aatggtgcgt aggatatcgc catcattgat gacggcgtcg agcgtcgtct ggtagtagaa
     1501 ggtgttgccg ccttccagca cgtcctccac gatgcgaccg gagcgctccg tcgtccaggc
     1561 gatgaggtga aagcccgcct gcctcgcgcg ttccgcgtat cgggagggca tg
//
LOCUS       DASQSL010001234         1303 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_146425, whole genome shotgun sequence.
ACCESSION   DASQSL010001234 DASQSL010000000
VERSION     DASQSL010001234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1303
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146425"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(37..1142)
                     /locus_tag="VE844_12740"
     CDS             complement(join(37..716,716..1142))
                     /locus_tag="VE844_12740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611722.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC02182.1"
                     /translation="MAKRYIVTLTAAERTCLLALTKKGKIAARKLTRAHILLQADTGD
                     MDAAIAAALHVSIATVERVRKRFVEEGLEAALHERPRPGGQRKLDGKQEAFLIALACS
                     PPPAGRTSWTMQLLAHKLVELRAIDAISDETVRRMLKKTSGKPWQKAAWCIPSVSAEF
                     VWHMEDILDLYAEPYDPQYPVVCFDESPYQLVGEVRQPLPARPGQPVRYDYAYRRTGT
                     CNLFMCFEPLQGWRHVKVTTRRTIQDFAHCMQDLVDVHFPQATVISVVLDNLNTHTPA
                     ALSATFPPAEASRILRKLDVHYTPKHGSWLNMAEIEFAVVSTPCLGRRLEDQETVRRA
                     VAAWETQRNAAKATVDWRFTTAKARRKLKHIYPL"
BASE COUNT          267 a          389 c          379 g          268 t
ORIGIN      
        1 cgatcccgag aaggccctag tgggtcacca cagggattat aaggggtaaa tgtgcttcag
       61 tttgcgtcga gccttggccg tcgtaaagcg ccaatcaacg gtggccttcg cggcattgcg
      121 ttgggtctcc caggcggcaa ctgcgcggcg gaccgtctcc tggtcctcca agcgccgccc
      181 caggcatggg gtcgacacga ccgcgaactc gatttccgcc atattcagcc aactgccatg
      241 cttgggggtg tagtggacat ccaacttgcg caagatgcga gaggcttcgg ccggcggaaa
      301 ggtcgcagac agtgcggccg gcgtatgggt gttcaggttg tccaacacca cactgatcac
      361 tgtggcctgg ggaaaatgga cgtctaccaa gtcctgcata cagtgcgcaa agtcctggat
      421 ggtgcgccgg gtcgtgactt tgacatgccg ccacccctgc aacggttcaa agcacataaa
      481 caagttgcac gtccccgtgc ggcgatacgc ataatcatac cggacgggct ggccgggtcg
      541 ggctggcaat ggctggcgga cttcaccgac caactggtag gggctttcat caaaacagac
      601 caccggatac tgcgggtcat aaggctcggc atagagatcc aagatatctt ccatgtgcca
      661 cacaaactcc gcgcttacgc tcggaataca ccaggccgct ttctgccacg gcttgcggag
      721 gtttttttga gcattcggcg caccgtttca tcagagatgg catcgatggc tcggagttcg
      781 acaagcttat gcgcaagtaa ttgcatcgtc cacgacgtgc gccccgccgg cggaggacta
      841 caggcgagag cgatcaggaa cgcctcctgc ttgccatcga gcttgcgctg tcccccagga
      901 cgtggacgct catgcagggc cgcttcgagg ccctcttcga caaagcgctt gcggacccgc
      961 tccaccgtcg caatgctcac atggagcgcc gcggcaatgg ccgcatccat atcccccgtg
     1021 tccgcctgga gcagaatgtg ggcccgggtg agcttacggg cggcgatctt ccctttcttg
     1081 gtcagggcca ggaggcacgt ccgttcagct gcggtgagtg tgacgatgta tcgtttggcc
     1141 atccggcctt cccatttttg accaaggata ccacgggaag gaccagctag caaaattgct
     1201 gtggcggacc actagtgggg aatcatcgga ttcccatcac gcatataccg atcaagatca
     1261 ataaaccttt acggccatcc cgtctcttct ctaatctttt gac
//
LOCUS       DASQSL010001235         1151 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_114719, whole genome shotgun sequence.
ACCESSION   DASQSL010001235 DASQSL010000000
VERSION     DASQSL010001235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114719"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1151)
                     /locus_tag="VE844_12745"
     CDS             complement(<1..>1151)
                     /locus_tag="VE844_12745"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZC02183.1"
                     /translation="DLSVALFSESEGVSGRQVLFERRPADPGGWVIASLHEDIRAQFP
                     YYSMRFTVEKQVRWSDIDQGPIILTALVLSAGIGLLPLASAQAKEREALELRERNAEI
                     ERQVQQQTHELALARDQALEASRIKSEFLASMSHEIRTPLNAIIGMAELLAETPLTKE
                     QDRYVEVFRTAGEALLSLVDDILDLSKIEARQLVLEAIDFNLRELVEEAVQIYALKTD
                     EKGVELVCRIAPQVPSYVRGDPARLRQVLLNLIGNAIKFTEEGEIVVRVMQDPTDPDS
                     LLFSVTDTGIGIPAEKLGAIFDSFTQVDSSITRKYGGTGLGLTISKRLVELMGGSLRA
                     ESELVKGSRFFFSVKFERAREPEKKPNKLPEVQLHGMRVLIIDDNATNR"
BASE COUNT          249 a          352 c          297 g          253 t
ORIGIN      
        1 aagcgattgg tggcattgtc gtcgatgatc agcacccgca tcccgtggag ctgcacctcg
       61 ggcagtttat tgggtttttt ttcaggttcc cgggcacgct caaactttac ggagaaaaag
      121 aacctactgc ccttaactaa ctcactttcc gccctgaggc tccctcccat cagctcaacc
      181 aagcgcttgg agatggtaag cccgagtccc gtccccccat atttgcgcgt gatcgaggaa
      241 tcgacctggg tgaaactgtc gaatatggcg cctaatttct cagctgggat cccaatgccg
      301 gtatcggtta cagaaaaaag cagagagtcg ggatcggtgg ggtcctgcat cacccgcacg
      361 acgatctctc cctcctccgt gaacttaatc gcattaccga tgaggttcag cagaacctgc
      421 cgcaaccgtg ccggatcccc cctcacataa gagggcacct gaggcgctat ccgacagacc
      481 aactctacgc ctttctcatc ggttttgagg gcatagatct gaacggcctc ctcgaccagt
      541 tcccgcagat taaagtcgat cgcctccaac accaattgac gggcttcgat cttcgacaga
      601 tcgaggatat catcgaccag gctcaaaagc gcctcgcccg ctgtcctgaa gacctcgaca
      661 tacctatcct gctctttggt caatggggtc tcggcgagca attcggccat tccgataatg
      721 gcattgagtg gcgtgcggat ctcgtggctc atgctggcca aaaactccga ttttatccgc
      781 gaggcctcaa gggcctgatc ccgggccagg gcaagctcgt gggtttgctg ctgcacctgc
      841 cgctcgatct ctgcattccg ttcccgtaac tcgagcgcct cccgctcttt ggcttgagcc
      901 gaggccaggg gtaatagacc gataccggcg ctgagtacca aggccgtgag gataatgggg
      961 ccctgatcga tatcactcca gcgcacctgc ttttcgacgg tgaatcgcat cgaatagtag
     1021 ggaaattggg cacggatatc ttcatgcaag gaggcaatga cccaaccgcc tggatctgcc
     1081 ggtcgtcgct caaacaggac ctggcgtccg cttacgccct ccgactcgct aaataaggcc
     1141 accgacagat c
//
LOCUS       DASQSL010001236         1188 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_187453, whole genome shotgun sequence.
ACCESSION   DASQSL010001236 DASQSL010000000
VERSION     DASQSL010001236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1188
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187453"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1002
                     /locus_tag="VE844_12750"
     rRNA            <1..1002
                     /locus_tag="VE844_12750"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          257 a          317 c          376 g          238 t
ORIGIN      
        1 acggcggccg taactatgac ggtcctaagg tagcgaagtt ccttgtcggg taagttccga
       61 cgtgcatgaa cggcgtaacg acttggtcgc tgtctcaacc gcagactcgg tgaaattgaa
      121 gtggcggtga agataccgcc tacccgcagc aagacggaaa gaccccatgc accttcacta
      181 tagtctggta ctgatgccgg ttgtggactg cgtaggatag gtgggaggcg tcgatccccc
      241 ggttccggcc gggggggagc caacggtgaa ataccaccct gtttgcgttc gtcgtctcac
      301 cctgacccgt gaatccgggc agggaaccgt gctaggtggg cagtttgact ggggcggtct
      361 cctccaaaag agtaacggag gagtgcaaag gcgggctcag accggttggc aatcggtcgt
      421 cgagcgtaaa ggtagaagcc cgcttgactg cgagtcctac aggacgagca gagctgaaag
      481 gcggtcttag tgatcctgtg gtagcgtgtg gaagcgccat agctcaacgg ataaaaggta
      541 ccccggggat aacaggctga tcgcccccga gcgtccatag cggcggggcg gtttggcacc
      601 tcgatgtcgg cccatcgcat cctggggctg aaggcggtcc caagggtttg gctgttcgcc
      661 aattaaagcg gtacgcgagc tgggttcaga ccggcgtgag ccaggtcggt ccctatctgc
      721 tgtgcgcgtg ggattcttga cggcacctct tccatagtac gagaggattt ggaaggacgg
      781 acccctggtg taccagttgt ctcgctagag gcacggctgg gtagctatgt ccggaacgga
      841 taaacgctga aagcatctaa gcgtgaagcc tatgccaaga cgagggttcc atgggggctt
      901 gcccccgaga gaccccgggt agaccacccg gttgataggc cggagctgta cggaccgaaa
      961 ggtcttcagg ttaccggtac taacggtcga taacttgacc acttttatcg atcatcgtcg
     1021 cacgccacga agctctgctt cgtggtaaca aaaatgtgtg ctcgacgatc gcggagtggc
     1081 tcggcttgaa gttgttctcc aacatctgac tgtcgaacca cactgtctga acctcaagat
     1141 ctcacttgcg aagaaacaag ccccgccggc cgtgaaacac cggccggc
//
LOCUS       DASQSL010001237         1716 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_89666, whole genome shotgun sequence.
ACCESSION   DASQSL010001237 DASQSL010000000
VERSION     DASQSL010001237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1716)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1716)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1716
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89666"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1716)
                     /gene="treY"
                     /locus_tag="VE844_12755"
     CDS             complement(<1..>1716)
                     /gene="treY"
                     /locus_tag="VE844_12755"
                     /EC_number="5.4.99.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012536956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047470 - (1,4)-alpha-D-glucan
                     1-alpha-D-glucosylmutase activity [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose synthase"
                     /protein_id="HZC02184.1"
                     /translation="AFDRFVDALHDHGMGQILDIVPNHMGVMGADNAWWLDVLENGPA
                     AAHARFFDIDWQPVNEALRGRVLLCVLGDHYGAVLESGELRLIFDLDSGAFSIHYYAH
                     HFPLDPGTYPRILGYHLDQLEARLDPGNPHLLEYQSLITAFNHLPPRTVKAPEKLTER
                     NRDKAIYTQHLAELCRRSPDIAWFIDENVRAFNGRPGEPVSFELLHDLLEAQAYRLAH
                     WRVASDEINYRRFFDINELAALRMEDKGVFDETHGLVLQLIGSGKLDGLRIDHPDGIY
                     DPVRYFKWIQGYFSSEAGTADEPQGSGPPLYIVVEKILASYERLPADWPVQGTTGYDF
                     ANLVNGLFVDTAARDKLDHIYTAFIGEQTDFDELLYRCKKHIVKVVLASELNVLANQL
                     SRLAQADWRTRDFTLHSLRSALAETVACFPVYRTYITGEHISAEDRRYVDWAAAVAKR
                     RSSAVDISIFDFIREVLLLQAAEGKPEAYREAVVVFAMKFQQYTAPVMAKGLEDTSFY
                     IYHRLVSLNEVGGDPRRFGTSVAMFHRANQERARHWPRAMVCTSTHDTKRSEDIRARI
                     SMLSEL"
BASE COUNT          359 a          513 c          514 g          330 t
ORIGIN      
        1 gagctcggac agcatactga tacgggcccg tatgtcctcg gagcgtttgg tgtcatgggt
       61 cgaggtgcac accatcgccc gcggccagtg ccttgcgcgc tcttgattgg cccggtgaaa
      121 catagccaca gacgtcccaa accggcgggg atcaccgccc acttcattga gcgataccag
      181 gcgatggtaa atatagaagc tcgtatcctc gaggcccttc gccataactg gcgccgtgta
      241 ctgctggaac ttcatggcaa acacgaccac cgcttcgcgg taggcttccg gctttccttc
      301 agccgcctgg agcagcagca cctcacggat gaaatcgaag atgctgatgt ccaccgccga
      361 actacgccgt ttcgccacgg ccgcggccca gtccacgtag cgcctatcct ctgcggagat
      421 gtgctcgccg gtaatatagg tacggtagac aggaaaacag gcgaccgtct ctgcgagggc
      481 gctcctcaag ctatgcaggg tgaagtcgcg ggtccgccaa tcggcttgag cgaggcggct
      541 caactgattg gcgagcacat tgagctcgct cgccaagacc actttcacga tgtgcttctt
      601 acagcggtac aaaagctcat cgaagtcagt ctgctcgcca atgaaggcgg tgtaaatatg
      661 atcgagctta tcccgagcgg cagtgtcgac aaacaggcca ttgaccaggt tggcaaagtc
      721 ataccctgtg gtgccctgca ctggccagtc tgccggcagg cgctcgtagc tcgcgaggat
      781 cttctccaca acgatataga ggggcgggcc agagccttgc ggctcgtcgg ccgtcccggc
      841 ctcagacgaa aaatacccct ggatccattt aaagtaccgt acgggatcat agatcccatc
      901 gggatggtcg atgcgcaggc catcgagctt gccggacccg atcaactgca ggaccaggcc
      961 atgggtctcg tcgaagaccc ctttatcctc catcctcaag gccgcaagct cattgatatc
     1021 gaagaaacgc cggtagttga tctcatcgga ggcgacccgc cagtgggcca aacggtaggc
     1081 ttgggcctca agcagatcgt gcagcagctc gaagcttacc ggttcgccgg gccgcccatt
     1141 gaacgctcgg acgttctcgt cgataaacca ggcgatgtcg ggggagcgcc tgcacagctc
     1201 ggccaggtgc tgcgtgtaga tcgctttgtc gcggttgcgt tcggtaagct tctcaggcgc
     1261 cttcaccgta cgcgggggta ggtgattgaa ggcggtgatc aggctttgat actccaaaag
     1321 gtgcgggttt cccggatcca ggcgggcttc aagctggtcc aggtgatagc cgaggatgcg
     1381 cgggtaggtc ccgggatcca ggggaaaatg gtgcgcatag tagtggatgc tgaaggcgcc
     1441 gctgtcaagg tcaaagatca gccggagctc gccgctctct aggacagccc catagtgatc
     1501 gccgagcaca cacaagagaa ccctgccgcg tagcgcctcg ttgaccggct gccaatcgat
     1561 gtcgaagaag cgcgcatggg ccgcagccgg tccattctca agcacgtcca gccaccaggc
     1621 gttgtccgcg cccattaccc ccatatggtt aggcactatg tccaggatct ggcccatgcc
     1681 gtgatcgtgg agcgcatcga caaagcgatc gaacgc
//
LOCUS       DASQSL010001238         1048 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_103978, whole genome shotgun sequence.
ACCESSION   DASQSL010001238 DASQSL010000000
VERSION     DASQSL010001238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103978"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(13..>1048)
                     /locus_tag="VE844_12760"
     CDS             complement(13..>1048)
                     /locus_tag="VE844_12760"
                     /inference="COORDINATES: protein motif:HMM:NF012870.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC02185.1"
                     /translation="TVGRIMALNRQSYDDIPHVRKPRTKQAPTPHPYKAAAPHEYWFI
                     DGRKMDFALDGVKWWSIILLDGYSRTMLAGAVAPSEASWVALMVLYTSCLRYGAPQRL
                     ISDSGGAYISDDFTAVCHRLGIEHKPIKSTQGESYKNLMETHFNIQRRLYDYQFSLTR
                     MPAEFEQIHQTFMETYNTTAHQGLLKDQFDPPIPLQVLGQAKGRLYTPDELTRNFSRA
                     LFPRTTNLYGCVTLHSHHFYVEQGVPHTQVLLWVYGEQLRAVLDNVVLAKYHCRYDWR
                     THKVTELRDGVFYLTRFASPQGTLIPLNPQKSLVLYRPTPPRRPAGKRVPRQQLLLFE
                     FVRPASSESA"
BASE COUNT          222 a          273 c          333 g          220 t
ORIGIN      
        1 acatatgcgg aattaagccg actcactcga ggcaggacgg acgaactcaa agagtagcaa
       61 ttgctgccga ggcacccgct tcccagccgg acgtcgcggt ggcgtagggc gatataggac
      121 taaagatttc tggggattca aggggatgag cgtgccctgt ggggaggcaa agcgcgtgag
      181 gtagaacacc ccgtcgcgga gctcggtgac tttatgggtt cgccaatcgt acctgcagtg
      241 atatttggct aagaccacgt tgtccaacac cgcccgcaac tgctctccgt acacccatag
      301 cagcacttgg gtgtggggca ccccttgttc gacatagaaa tggtggctgt gtaaggtgac
      361 acagccatac aggttcgtgg tccggggaaa gagggcgcgc gaaaaattcc gggtcaactc
      421 atcgggcgta tagaggcggc ctttcgcctg gcccaagacc tgcagcggaa taggaggatc
      481 aaactggtct ttgagcaatc cttgatgtgc tgtggtgttg taggtttcca tgaaggtctg
      541 gtggatctgc tcgaactccg ccggcatcct cgttaaggag aattgatagt catagagccg
      601 ccgctggatg ttgaaatggg tctccatgag gttcttgtag ctttcacctt gggtgctctt
      661 gataggctta tgctcgatcc ccaagcggtg acacaccgcg gtgaagtcat cggagatgta
      721 ggctccaccg ctatccgaga tgaggcgctg gggggcccca tagcgcagac aggacgtgta
      781 gaggaccatc aacgcgaccc agctggcttc ggacggcgcc acggcgcctg ccagcatggt
      841 gcgtgagtag ccgtctaaga gaatgatgct ccaccacttg accccgtcca aggcaaagtc
      901 catcttgcgg ccatcaataa accaatactc gtggggggcc gcggctttgt aggggtgggg
      961 cgtcggggcc tgcttggtgc ggggtttccg cacgtgcgga atatcatcat agctctgccg
     1021 attgagggcc atgatgcgcc ccacggtg
//
LOCUS       DASQSL010001239         1154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_10750, whole genome shotgun sequence.
ACCESSION   DASQSL010001239 DASQSL010000000
VERSION     DASQSL010001239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10750"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            277..>1154
                     /locus_tag="VE844_12765"
     CDS             277..>1154
                     /locus_tag="VE844_12765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02186.1"
                     /translation="MSPAKRYAKKQAKARQRRRLNAQERLERDRHQAPQAAEALHQAL
                     EELGLPETLVSEIEGRLQSQQKLLSKIVGVMFPALFGCRTPSELCRVRGWDKNWPSRL
                     LHALPKRSWLKRLRRLGLEVLVPLWRHVEGKSEATQSRWQWTWAVDDSVFHKYGEQLG
                     LVGHWWSGQQHRVLAGIDGLLLVVVIGDGKLVVPVDFVVRRPDPIGVGGPCRDKLTWA
                     REMIDARLLALSKRGLHLPAPIITADSWFSDSKLMGHVRHRHQGTFLVEGKVTYTFTL
                     ANGRQVNGHDLLAGKWS"
BASE COUNT          252 a          296 c          350 g          256 t
ORIGIN      
        1 gttttctaca ttaagaatat agaattatgc taatatcgta gcgtgaatcg gggtcgagag
       61 taggaattaa aactggctat tccgaattta agtttcgtca agcattgacg cgggtccccg
      121 ctggagggct cgtgaaagtt atttataaca aagggcttat atcaaccacg ggaggagcat
      181 gacctccttt catgggtcgg cttgaaatcg agatacggtg ggacatggtt tcctttctat
      241 cacgtatcaa ctcaccacga tacaaaggaa atcagcatgt ccccagccaa acgatacgcc
      301 aaaaaacaag ccaaagctag acagcgccgc cgcctcaacg cgcaagagcg cctcgagcgc
      361 gaccgtcacc aagcgccaca ggccgccgaa gctttgcatc aagccctgga ggagttgggc
      421 ctgcccgaga ccttagtgag cgaaatcgaa ggccgtttac agagccagca gaagctgttg
      481 agcaaaattg tcggggtcat gttccccgcc ctttttggct gtcgcacccc ctcagagctc
      541 tgtcgggtac gggggtggga caagaactgg ccctcgcgtt tgttgcacgc cttgcccaaa
      601 cgctcctggc tcaagcggct gcggcgtctg ggccttgagg tgttggtgcc gctttggcgt
      661 catgtcgaag gcaaaagcga agcgacccaa agccggtggc agtggacgtg ggccgtggat
      721 gactcggttt tccacaagta tggcgagcaa ctggggttag tcgggcattg gtggagcggt
      781 cagcaacacc gggtgcttgc gggcattgat ggcctcttgc tggtggtcgt cattggcgat
      841 ggcaagttgg tggtgccagt cgattttgtc gtgcggcgac ctgaccccat tggcgtgggc
      901 gggccttgtc gggacaagtt gacctgggct cgggagatga tcgatgcgcg cctgttggcc
      961 ttgagcaagc gcggcttgca cctgccggcg ccgatcatca cagccgatag ttggttcagt
     1021 gactccaagt tgatggggca tgtccgtcat cggcatcaag gcaccttctt agtggaaggc
     1081 aaagtcactt acacgtttac cttggccaat ggacgtcaag tcaacgggca cgatttactt
     1141 gcgggcaaat ggtc
//
LOCUS       DASQSL010001240         1619 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_10753, whole genome shotgun sequence.
ACCESSION   DASQSL010001240 DASQSL010000000
VERSION     DASQSL010001240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1619
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10753"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            283..>1619
                     /locus_tag="VE844_12770"
     CDS             283..>1619
                     /locus_tag="VE844_12770"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HZC02187.1"
                     /translation="MGKITYTSSSPWIPAFLAVIAALWPWGWPLTSVSAAPASTSSEA
                     GVNVLPISLGHSVVLALQNNMDIKLERLSPLIREEEIRREAGAFFAPRLGFEAGADRS
                     QRPAGSVLAGAQVLETQNLDVNTGVSMRSLSGGVVSIDFRNKCFESNSVFQLFDPQYT
                     SELALTLTHPLLKNFGVNINGLRIKVAQNNLQISKYQLKVVVTNLIVDVQQTYWDLVL
                     GVNDLKARRRALEVAQHLQQRTTEMVAGGRLPALALLQAKTAVLEREIDLVAGEHAFR
                     DAQARLRALLNLDKVSAPAEYTLVPTDSPLLEPKTVSAEEGLKHALANRPELFQARLD
                     QENRALGVKFAHNQRLPELNFVGSVGLSGLSGTPTPNPLTTIPVGGVPVTNFLPDNQS
                     VSSLEGGYEDALGKLFSGDFISYKVGLNVQIPLGNQLARSELAKARLEEEKSRL"
BASE COUNT          340 a          491 c          467 g          321 t
ORIGIN      
        1 gtgccgcatc ctgacgcgac cgctccgccc cggcgtccgt aagcagcctc tgcaccttta
       61 ggtcgaaggg gtaaagccat ggtcaatgct acacgggtca cgcccaagct ggtgcggcgg
      121 atgcgcgttc gtgatctctc cgcgtgctct cgtgacccat aagccgaggg tttcttcggc
      181 agcttgccgg tgaatgatcg agcagatctc ctacccccac ggtctacgcc acaaagccac
      241 gggacttgtc cggtcccctg agacaataga tggaggttcg ctatgggcaa aattacgtat
      301 acatccagct cgccctggat tcccgcgttc ctcgcggtca tcgcggcttt gtggccatgg
      361 ggctggccgc tcacgtcggt gagtgcagca ccggcaagca ccagctctga ggccggcgta
      421 aacgtgctgc cgatctccct tgggcacagc gttgtgcttg ccctgcagaa caacatggac
      481 attaaactcg aacgcctgag cccactcatc agggaggagg agatccgccg ggaggccggc
      541 gccttcttcg ccccacggct gggctttgag gccggcgcag atcgatctca acggcccgca
      601 gggtcagtgt tagcgggagc tcaagtgctc gaaacccaaa acctcgacgt caacaccggt
      661 gtatcgatgc gcagtctcag cggcggcgtc gtttccatcg acttcaggaa caagtgtttc
      721 gagagcaact cggtattcca actcttcgat ccacagtaca cctcagaact ggcgttgact
      781 ttgacccatc ccctgctgaa gaactttggc gtgaacatca atgggctacg catcaaggtc
      841 gctcagaata acctgcagat ctccaaatat cagctgaagg tggtggtcac gaacctcatc
      901 gtcgatgtgc agcagacata ctgggatctc gtcctcggag tgaacgacct gaaggccagg
      961 cgtcgcgccc ttgaggtcgc ccagcatctt caacagcgga cgacagagat ggtcgccggt
     1021 gggcgtttac cggccctcgc gctgctccag gccaaaacgg ctgtgctcga gcgcgagatc
     1081 gaccttgtcg ctggagagca cgccttcagg gacgcccagg cgcgcctcag ggctcttctc
     1141 aaccttgata aggtttcggc acccgccgaa tacacgctgg tccccacgga ttccccgctg
     1201 ttagagccca agacggtgtc cgccgaagag ggcttgaagc acgccctggc gaatcgtccg
     1261 gaactgtttc aggcaagact tgatcaagaa aatagggcgt taggggtgaa attcgctcac
     1321 aaccagcgcc tccccgaact caacttcgtc ggcagcgttg gcctgagcgg cctgagtggt
     1381 acccccaccc ccaatccact gacgacaatt ccggttgggg gtgtgccggt gacgaacttc
     1441 ctgcccgata accagagcgt cagttccctc gaaggaggct atgaggatgc gttggggaag
     1501 ttgttttcgg gggatttcat ttcctataaa gtagggctca acgtgcagat tcccttgggc
     1561 aatcaattag ccagaagcga gctggcgaaa gccagactgg aagaggaaaa atcccgcct
//
LOCUS       DASQSL010001241         1069 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_89684, whole genome shotgun sequence.
ACCESSION   DASQSL010001241 DASQSL010000000
VERSION     DASQSL010001241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89684"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..779)
                     /locus_tag="VE844_12775"
     rRNA            complement(<1..779)
                     /locus_tag="VE844_12775"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          199 a          360 c          266 g          244 t
ORIGIN      
        1 actaccgggg tatctaatcc cgttcgctcc cctagctttc gcgcctcagc gtcaagagtg
       61 ggccaggtag tcgccttcgc cactggtgtt cctcccgata tctacgcatt tcaccactac
      121 accgggaatt ccactaccct ctcccacctt caagccgatc agtttccgat gcagtttccc
      181 agttaagccg ggagatttca catcggactt gaccagccgc ctgcgcgctc tttacgccca
      241 gtaaatccgg acaacgcttg ccacctacgt attaccgcgg ctgctggcac gtagttagcc
      301 gtggcttatt cctcaggtac cgtcttggat cttccctgag aaaagaggtt tacgacccga
      361 gagccttcat ccctcacgcg gagttgctgc ctcagacttt cgtccattgg gcaaaattcc
      421 cgactgctgc ctcccgtagg agtctgggcc gttctcagtc ccagtctggc tgatcatcct
      481 ctcagaccag ctaccgatcg tcgccttggt gagccgttac cccaccaact agctaatcgg
      541 acgcaggccc ctccggaagc ggattgctcc tttagacggc gaatcgaatc gccgaccaca
      601 tgcggtatta gccacccttt cgggcagtta ttccccactt ccgggtaggt cacctacgcg
      661 ttactcagcc gtccgccact aggaaacctc caagcaagct cggaggctcc tcgttcgact
      721 tgcatgtctc acgcaccccg ccagcgtttg tcctgagcca ggatcaaact ctccgtacaa
      781 aacgaaacca gtggtcttgc cctcagagtt tcctcatcgg gctgctccac cggttaagag
      841 ttcgacgttg tcccgctgac tcgtgtggat tcctgtcact cttcagctgg taagccacgt
      901 tgccgatcgc tcggcttcgt tcgattcgag tctcccctat cggtgaactc ggatgatcca
      961 cgcgcgcgac ccggtgggtc gccgttcgcg gctcatcggc cggctgaact gccggcgcga
     1021 agaggaacta taggacacgg gcccggagac gtcaaccgag cgcgggagc
//
LOCUS       DASQSL010001242         1653 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_77341, whole genome shotgun sequence.
ACCESSION   DASQSL010001242 DASQSL010000000
VERSION     DASQSL010001242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77341"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1653
                     /locus_tag="VE844_12780"
     CDS             <1..>1653
                     /locus_tag="VE844_12780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015281449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase"
                     /protein_id="HZC02188.1"
                     /translation="EVEADDVIGTLATRARAEGLTTLVSTGDKDMAQLVNAEVRLVNT
                     MDNTVLDEDGVERRFGIPPAMMIDYLTLIGDKVDNIPGVPMVGPKTAAAWLKKYASLE
                     SLMAHADEIQGKIGENLRANLSQIPLSKKLVTIACDLPLPLAPRELKPAFPDTQALKD
                     WFKRLEFKTWLSELLERPKAGPKAAEHEEGPSDYQTILERAALDAWIKQLAEAELIAL
                     DTETTSLDYMQAQVVGVSFAVLPGTAAYVPFGHDYPGAPRQLSRETALQALRPILEDP
                     KRPKLGHNLKYDMSVLANHGIRLQGIRFDSMLESYVLDSTATRHDLDSLILKYLGYRT
                     IHFEEVAGHGSKQLTFNQVPIEQAAPYAAEDADVCLRLHQALWPKLNAEAGLKRLYEQ
                     IEIPLVPVLSRIERNGVKIDIEMLARQSKELAKRLQALEDEAYTLAGERFNLGSPKQI
                     QAILYDRLRLPVGAKTPQGQPSTSEAVLQELALDYPLPRIILEHRALSKLKSTYTDKL
                     PQQVNPRTGRVHTSYHQAVAATGRLSSSDPNLQNIPVRTEEG"
BASE COUNT          369 a          523 c          464 g          297 t
ORIGIN      
        1 atgaggtcga ggccgatgat gtgattggaa cgctggcaac ccgcgcccgt gctgaaggcc
       61 ttaccaccct cgtctcgacc ggggataaag acatggcgca actggtgaac gcagaggtgc
      121 ggctggtcaa taccatggac aataccgtat tggacgaaga cggagtggag cgcagattcg
      181 ggataccgcc cgcgatgatg atagattatc tcacgctcat cggggacaag gtcgataata
      241 tcccaggcgt gcctatggtc ggaccgaaga cggcggcagc ctggcttaag aagtacgctt
      301 ccctggaatc gctcatggcc cacgccgatg agatccaggg caagatcggc gagaatctcc
      361 gagcgaatct cagccagatc ccgctctcga agaagctcgt gaccattgcc tgtgatctac
      421 ccttgccgct tgcgccgcgc gagcttaagc cggccttccc cgacacccag gccctgaagg
      481 attggtttaa gcggcttgaa ttcaagacct ggctttcgga gttattggag aggcccaaag
      541 cagggccaaa ggcggcggaa cacgaggagg ggcccagcga ctatcagacc atcctcgaac
      601 gtgcggcttt ggacgcctgg atcaaacagc tggccgaggc ggagcttatc gccctggata
      661 ccgagaccac gagcctcgat tacatgcagg cccaggtagt gggggtttcc tttgccgtcc
      721 tgcctggaac cgccgcctat gtgcctttcg gccatgatta tccgggggcg cctcggcagc
      781 tctcacgaga gacggccctg caagccttgc ggccgatcct ggaggacccc aagcgcccga
      841 agctcggcca caacctcaag tatgacatga gcgtgctcgc caatcatggg ataaggctcc
      901 aggggatccg gtttgacagt atgctcgaat cctacgtgct cgatagcacc gcgacccgcc
      961 acgatctcga ttcgctgatc ttgaaatacc tcggctaccg caccatccac ttcgaggagg
     1021 tcgcaggcca cggatccaag caactcacct tcaatcaagt ccccatcgag caggccgccc
     1081 cttatgcggc cgaagatgcg gatgtatgcc tgagattgca tcaggccctg tggcccaagt
     1141 taaatgccga agccgggctt aaacgcttat acgaacagat cgagatcccg ctggtgccgg
     1201 ttttatcgcg tatcgagcgc aacggtgtca agatcgacat agagatgcta gcccgccaga
     1261 gcaaggaact cgctaaacgc ctgcaagccc tggaggatga agcctataca ctcgccggtg
     1321 agcgctttaa tctcggttca cccaagcaga tccaggcgat cctctatgac cggctgcgcc
     1381 tgccggtcgg agccaagacc ccccaagggc aaccctcgac ctccgaagcc gtgctccagg
     1441 agctcgcgct cgactatccc ctgccccgga tcatcctcga acaccgggct ttgagcaagc
     1501 tcaaatcgac ctataccgac aagctacccc aacaggtcaa tccccgtacc gggcgggtgc
     1561 acaccagcta tcatcaggca gtggccgcca ccggccggct ctcctcctcc gatcccaatc
     1621 tccagaacat cccggtgcgt accgaggaag gac
//
LOCUS       DASQSL010001243         1051 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_77348, whole genome shotgun sequence.
ACCESSION   DASQSL010001243 DASQSL010000000
VERSION     DASQSL010001243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77348"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..399)
                     /locus_tag="VE844_12785"
     CDS             complement(<1..399)
                     /locus_tag="VE844_12785"
                     /inference="COORDINATES: protein motif:HMM:NF019984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron maturase-specific
                     domain-containing protein"
                     /protein_id="HZC02189.1"
                     /translation="MILVDAYPQHDWLLKAVEKRLREELAVLQVTINEAKSRIVDLAT
                     GESFGFLGFEFRRVRSRAGKWRAYYPPLLKKRTALLQKLKVIFRGHQSQPIDRVIYLV
                     TPIVRGWVRYFAIGDASRCFGFIKDWVEKKV"
     gene            complement(421..>1051)
                     /locus_tag="VE844_12790"
     CDS             complement(421..>1051)
                     /locus_tag="VE844_12790"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HZC02190.1"
                     /translation="TLYEAYRLAKANNGAPGSDGVTFEAIEASGVEAFLQQIRDELVA
                     RTYQPMRLRQKAIPKDGGTKVRVLSIPTIRDRVVQGALKLILEPIFEADFQPGSYGYR
                     PKRSARDAVLRVADAIVKYKTRVIDVDLQAYFDNVRHHLLLAKVAQRVSDPDILHVLK
                     LILKASGKQGVPQGGVISPVLSNLYLTEVDRMLERAQEVTRRGPYTDLE"
BASE COUNT          199 a          327 c          305 g          220 t
ORIGIN      
        1 caccttcttt tccacccagt ctttaataaa accaaagcag cgactcgcat cgccaatggc
       61 aaagtagcgg acccagccgc ggacgatggg ggtgacgagg tagatcaccc gatcaattgg
      121 ctgggactgg tggcctcgga aaatgacttt cagcttctgc agcagcgcgg tccgcttctt
      181 cagcagtggc gggtaatacg cccgccattt gccagcgcga ctgcgcacgc gccggaactc
      241 aaagcccagg aatccgaagc tctcgcccgt tgccagatcg acgatccggc tcttggcctc
      301 attaatggtc acttggagga ccgcgagttc ctcccgtagt cgtttctcta ccgccttcag
      361 cagccagtca tgttgtggat aggcatccac cagaatcacc agatcatcgg caaagcgggc
      421 ctactcgagg tcggtgtacg gcccgcggcg tgtgacctcc tgggctcgct ccagcatccg
      481 gtcgacctcc gtgaggtaca ggttgctgag cactggggaa atcacacccc cttgcgggac
      541 cccttgcttg cccgaggctt tcaggatcag cttcagcaca tgcaggatgt ctggatcgct
      601 aacccgctgg gccacttttg ccaacaggag gtgatggcgg acgttgtcga agtacgcctg
      661 caggtcgacg tcgatgaccc gtgttttgta cttcacgatc gcgtccgcga cgcgcaggac
      721 cgcatcccgc gcgctccgct tcgggcggta gccatacgat cccggttgga aatctgcctc
      781 aaagatgggc tccaggatca gcttaagggc tccctggaca acgcggtcgc ggatggtcgg
      841 aatcgagaga actcggacct tggtgccccc gtctttcgga atcgcctttt gccgcagccg
      901 catgggttga tacgtacggg cgaccagttc atcccgaatc tgctgaagaa aggcttccac
      961 gccgctggcc tcgatggcct caaacgtcac cccatcgctt cctggagcgc cgttgttggc
     1021 cttggcgagt cggtaggctt cgtagagcgt t
//
LOCUS       DASQSL010001244         1051 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_34003, whole genome shotgun sequence.
ACCESSION   DASQSL010001244 DASQSL010000000
VERSION     DASQSL010001244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34003"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..859
                     /locus_tag="VE844_12795"
     CDS             <1..859
                     /locus_tag="VE844_12795"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZC02191.1"
                     /translation="GIEIRQDSPTDDYAKIQSMVENNRVIWDVVNVSNDFGLERTGNL
                     LEPLDYSVIDKKPILEGYASEYRIACMLYANTLAYNTEQVEGTPGSWADLFDTQKFPG
                     RRGLLKSPSETLEVALLGDGVAPENLYPLDVDRALNKLDAIKDQIVWWETGTQLQQQL
                     ADGEVALASAWNGRAQAEIDAGVPLKIQWNQNLQTADYLVVPKGTANKGEAMELIAYC
                     VSAENNHRLSEFIEYAPINKESIPKVDPQVAPQLPTAYRDVGVTYNPVWWDNNREAVM
                     ERFDKRVKG"
BASE COUNT          278 a          296 c          299 g          178 t
ORIGIN      
        1 cggcatcgaa atccgccaag actcacccac cgacgactac gccaagatcc aatccatggt
       61 ggagaacaac cgggtgatct gggatgtggt aaacgtcagc aacgacttcg ggctcgagcg
      121 cacaggaaac ctactcgagc cgctcgacta ctccgtaatc gacaaaaagc ctatcctgga
      181 agggtatgcc agtgagtacc ggattgcttg catgctctac gccaacaccc tggcttacaa
      241 cacagaacag gtggagggca ctccaggcag ctgggccgac ctcttcgaca cccagaagtt
      301 ccctgggcgg cgtggcctcc ttaagagccc atcggaaacc ctggaggtag cgttgctagg
      361 cgacggcgtg gcgccagaga acctttaccc gctcgatgtg gatcgggcgc tcaacaaact
      421 cgacgctatc aaggatcaaa ttgtgtggtg ggaaaccggt acccaattgc agcagcagct
      481 cgccgatggt gaggtggcgc ttgcctcggc ttggaatggg cgagcacagg cggagatcga
      541 cgcgggagtt ccacttaaga ttcagtggaa tcagaacctg cagactgccg actatctggt
      601 agttccaaaa ggaacagcca acaagggtga ggctatggag ctgatcgcct actgcgtatc
      661 cgcagagaac aaccaccggc tctccgaatt tattgaatat gcaccgataa acaaagaatc
      721 gattcccaaa gtagatccac aagtcgcccc tcagctgcct acggcatacc gagatgtggg
      781 tgtaacgtat aaccccgtat ggtgggataa caaccgggaa gcggtgatgg aaagattcga
      841 caagcgggtg aaaggttgag gcccaaggct gtccctacgg cggtaaacaa ataggcttgg
      901 ttcaccgctc ccgtcacctt ccacctcgcg agcccgcaat gtcgaggcaa cagggtagca
      961 agaaaaggcc cacaatgggt cccgaactac ggcattagcg gagacacgac atgaaagcag
     1021 ccaccgcacg gaacggacga ccaccgcggg g
//
LOCUS       DASQSL010001245         1363 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_131330, whole genome shotgun sequence.
ACCESSION   DASQSL010001245 DASQSL010000000
VERSION     DASQSL010001245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1363
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131330"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(400..1188)
                     /locus_tag="VE844_12800"
     CDS             complement(400..1188)
                     /locus_tag="VE844_12800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02192.1"
                     /translation="MTPAKTTATIHTLRPKLLKPQDGSETRLVQTSVAVVLGLNAALF
                     LQQLNFRLRTPSHVVDGVAWYEASYASLQAVDFPFWSEKTIARTARRLEKRGIITARP
                     MSRNTYDRTKWYTINDEKLQEALGCTTGQSVPLEGTASPHHHEDTVSPSLEEETREKK
                     EPEGAHMCKGQEDEDQLPAQPQAATVDTTPAEAAPPCPVGAAPSRPVAEPEATDTRAV
                     QSALTEKQQACPHPFAQVVTLTGGITICNHCFGLVAFDPLADAA"
BASE COUNT          233 a          412 c          411 g          307 t
ORIGIN      
        1 tgggggtata acggccgtat aggcggtttt ccattcggtg caaggaaaag ctccattttc
       61 cggatttaac cgcgtctttg gccattgggt gccctgtagg aggcatgttt tacccccgtc
      121 actaccccat catcagcaca ccgtttggtt cctggtggca ggtcccgcaa ggaacagcag
      181 cgctgtgcgc agggagtccc gccaaatcgg cggggcgacc ggaggcactg catcgcgcca
      241 gcgactctct ggtgcatcct accggtggga gttcttgtcg aagcgcccgg caatccggta
      301 cgccagggcg gcgccttgtg cccccacccg ctgctttgcc tccagtcgcg aaaccagttc
      361 gctccttgcg caaagctctc cttggagacc tcccgttcct cacgccgcgt ccgcaagcgg
      421 atcaaaagcc accaggccga aacagtggtt gcaaatggtg atcccgccgg tcagggtgac
      481 gacttgcgca aagggatggg ggcatgcctg ttgtttttcc gttagcgcac tctgcacggc
      541 tcgggtatcg gtggcttccg gctcagccac ggggcgggaa ggtgctgcac ccacagggca
      601 gggaggcgct gcctccgcgg gcgtggtgtc tacggtggca gcctggggtt gcgccggtag
      661 ctggtcttcg tcttcctgcc ccttgcacat atgtgcaccc tccggctctt ttttctctct
      721 tgtctcttct tctaatgatg gggacacagt gtcctcatga tgatggggac tggctgtccc
      781 ctcgagtggg acactctgtc cggttgtaca accaagcgct tcctggagct tctcatcgtt
      841 gatggtgtac cacttcgtcc ggtcatacgt attgcggctc atgggtctgg cggtaataat
      901 gccccgcttc tccagccgcc gcgcggtacg ggcaatggtc ttttcgctcc agaagggaaa
      961 atccaccgcc tgcaggctgg cgtaggaggc ctcataccag gccaccccgt ccaccacatg
     1021 cgagggcgta cgcaaccgga agttgagctg ctggagaaac agcgccgcat tgagccccag
     1081 gaccaccgca acagacgttt gcaccagccg ggtctcgctg ccgtcttggg gtttgaggag
     1141 tttggggcgg agggtatgga tcgtggcggt ggtcttcgca ggtgtcatcg ggtaggtctc
     1201 ccttgcatcc ggagagccga acccggtaca cttacagctc ggctctgttt gggaatcgct
     1261 ccggagttaa ggattgcctg tccactccgg ggcaccctca tcttttccac ccgccattgt
     1321 gtaacctgac aagtaaaaaa tcaatctaag agtcacttgg ctg
//
LOCUS       DASQSL010001246         3364 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_23699, whole genome shotgun sequence.
ACCESSION   DASQSL010001246 DASQSL010000000
VERSION     DASQSL010001246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3364
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23699"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(126..2177)
                     /locus_tag="VE844_12805"
     CDS             complement(126..2177)
                     /locus_tag="VE844_12805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013965751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZC02193.1"
                     /translation="MTRDTLKSAPLLEVEDLRTYLGHGDTVVRAVDGLNFSIHRGETF
                     VLLGESGCGKSMTALSLMRLLPPSGRIIAGRVMLDGHDLLKLPEAAMRAIRGGRIAMI
                     FQEPQSSLNPVLTIGAQIGEALACHKGLKGAAQRARVLELLDAVGIPDRARRYHEYPH
                     QLSGGMKQRVMIAMALAGEPDLLIADEPTTALDVTIQAQVLELLRQLQQELGMAILLI
                     THDLGVVAQMADRVGVMYAGHIVEQRDRAPFFKAPAHPYSRKLFESLPERGKRGQVLS
                     VIRGTVPPLTHAFPACRFESRCDSAWETCRRVAPGWTLLLPAQGVRCHLHDPRYKDAR
                     PPSTRYPSAPTLKTWAEAAIDGQSLLAVQGLKVHFPIRKGILQRVVGQVRAVDGISLE
                     ITRGATLALVGESGCGKTTAGKGILRLIEPTEGAVRFNSENFIALKGQDLRRRRADIQ
                     FIFQDPYSSMNPRMMIADIIEEGMIAQRIGKTKAEREARVDELLQQVGLRPEEVKYRY
                     PHEFSGGQRQRICIARALAVNPKLIICDEPTSALDVSVQAQILNLLKELQNRLGLAYL
                     FITHNLAVVEYLAHYVAVMYLGRIVEQGTVDEVLEQPKHPYTRALLSAVPVIDPSTKR
                     EVIRLTGDLPSPADPPAGCHFHPRCPKAMSKCREAYPPAVAFSATHSAKCILYQEDRP
                     S"
     gene            2290..3222
                     /locus_tag="VE844_12810"
     CDS             2290..3222
                     /locus_tag="VE844_12810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002692309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase family protein"
                     /protein_id="HZC02194.1"
                     /translation="MAALICGSLAYDNIMVFPDRFKNHILPEKIHILNVCFMVPELRR
                     EFGGCAGNIAYNLKLLEGDPLPMGTVGSDFGPYFEWFDRAGIRRDYITIIDNTLTAQA
                     FITTDLDDNQITAFHPGAMNFSHKNSVLDTMGVTVGLLAPDGREGMIQHAREFVEAGI
                     PFMFDPGQGMPMFSREDLLQFIEQARWLAVNDYEWQLMQDRTGLSSRDLTERVEALII
                     TRGAEGSSVYTKDHHYAIPAAQARAVKDPTGCGDAYRAGLLYGLMNKFDWETTGRIAA
                     LLGAIKIEHHGTQNHRFSRAEFEARYQESFGLSI"
BASE COUNT          718 a          957 c          964 g          725 t
ORIGIN      
        1 atatagggcg agccttcagc gcccttgcgc cgctggcacg gtgcttacgc gcagcaaact
       61 cgagcgcttt gaggataact cccagattgt ctgccataac ctctcatgag accctgttca
      121 gggggttagc ttggcctatc ctcctggtac aaaatacact tggcgctgtg ggtcgcgctg
      181 aaggcgaccg cagggggata agcctccctg catttggaca tggccttggg gcaacggggg
      241 tggaaatggc agccggcggg tggatcggcg ggagagggga gatccccggt aagccggatc
      301 acttcgcgct tggtactcgg atcgatgacg ggaacggcgg acagaagggc acgggtataa
      361 gggtgtttag gctgctctag aacttcgtct actgtccctt gctcgacgat ccggcccaga
      421 tacatcacgg ccacatagtg agcaagatat tccaccacgg cgagattgtg ggtaataaag
      481 agataggcaa gtcccaggcg attttgtaat tcctttaaaa gattgaggat ctgggcttgc
      541 accgagacat cgagggcact ggtcggctcg tcgcagataa taagttttgg gttcacagcc
      601 agcgcccggg cgatacagat gcgctgacgc tgcccgcccg agaattcatg cggatagcgg
      661 tacttgacct cctcgggcct caggcccacc tgctgcaaca gttcatccac acgggcttca
      721 cgctcagcct tggtcttacc gatccgctgg gcgatcatcc cttcctcgat gatatcggcg
      781 atcatcatgc gggggttcat ggaggaataa ggatcctgga agatgaactg aatatccgcc
      841 cgccgtcggc ggagatcctg ccctttaagg gcgataaagt tctcgctgtt aaagcgcacg
      901 gccccctcag tcggctcgat caatcgcagg atccctttgc cggcggtggt cttgccgcaa
      961 cccgactccc cgaccaacgc caacgtagcg ccacgggtga tctcaagcga gatcccgtcc
     1021 accgcccgga cctggcccac gacccgctgt aagatcccct tgcggatagg aaaatgcacc
     1081 ttgagccctt gcacagccag caagctttgt ccatctatgg ctgcctcagc ccaggtcttt
     1141 agtgttggcg cggatggata tctagtggat ggcggacggg catctttata acgtggatca
     1201 tggagatggc aacgtacacc ctgggccggc aacagtaggg tccagcctgg cgcaacccgg
     1261 cggcaggttt cccaagcgct gtcgcagcgg gactcaaaac ggcacgcagg aaaggcatgc
     1321 gttaaaggcg gcacggtacc gcggatgacg gagagcactt ggccgcgctt gcctctctcg
     1381 ggcagcgatt cgaacaattt gcgcgaataa gggtgagccg gggctttaaa gaatggtgcg
     1441 cgatcacgtt gctcgacaat gtgcccggcg tacatgaccc ccacccgatc ggccatctgc
     1501 gccaccacgc caagatcatg ggtaatgagc aaaatggcca tacccagctc ctgctgtaac
     1561 tgtcgcaata gttccagcac ctgcgcctgg atagtgacat ccagggcggt cgtcggttca
     1621 tcggcgatca acagatcggg ttctccggcg agggccatgg cgatcatcac ccgttgtttc
     1681 attcctcctg agagctggtg cgggtattcg tgatagcggc gggcgcgatc cgggatcccg
     1741 accgcatcca acaattccag tacccgcgca cgctgcgcag cacctttgag gcctttgtgg
     1801 caagccagcg cctcgccgat ctgggcgccg atcgtgagca ccggattcaa agagctctgg
     1861 ggctcctgaa agatcatagc gatccgcccg ccgcggatag cgcgcatggc tgcttccggc
     1921 agctttaata gatcgtgccc atccaacata acccggcctg cgatgatccg gccgctaggg
     1981 ggcaaaaggc gcatgaggga taacgctgtc atcgatttgc cacaacctga ttcgccgagc
     2041 aatacaaagg tttcaccacg atggatggag aagttgagac cgtctacggc gcgcaccacc
     2101 gtatctccgt gacctaagta ggtgcggagg tcttccacct caagcagagg ggcactctta
     2161 agcgtatctc gggtcatggg gggtctcgaa attcgatagc gctgtggaat ggtaggatag
     2221 catagtgatt atcccccgct ttcggctaat atagttcata acatcaatcc tctgggagaa
     2281 ttaacaccta tggcagcgct gatctgcggt tcactcgcat acgataacat catggtcttt
     2341 cccgatcggt tcaaaaatca tatcttgcct gaaaagatcc atatactgaa tgtctgtttc
     2401 atggttcctg agctgcgccg cgaattcggc gggtgcgccg gcaatatcgc ctacaatctc
     2461 aagctcctcg agggcgatcc cttgccgatg ggcacggtcg gaagcgattt tggaccttat
     2521 ttcgagtggt ttgaccgagc cgggatccgg cgcgactata tcacgatcat cgataatacc
     2581 ttgaccgcac aggcatttat cacgaccgat ctagatgaca accagatcac ggcctttcat
     2641 ccgggtgcta tgaatttttc tcataaaaac agtgtcttgg atactatggg cgtgaccgtt
     2701 gggctattgg cgccggatgg gcgagaaggc atgatccagc atgcgcgcga gtttgtagag
     2761 gccgggatcc ccttcatgtt cgaccccggc caaggcatgc cgatgttcag ccgggaagat
     2821 ctcttacagt ttatcgagca ggcgagatgg cttgctgtca atgattatga gtggcagctc
     2881 atgcaggatc gcaccggtct ctcatcccgc gatctgaccg aacgggtgga ggccctgatc
     2941 atcacccgag gtgcagaagg ttcatctgtc tacaccaagg accatcacta tgcgatcccc
     3001 gccgctcaag cgcgggccgt caaggaccct acgggttgtg gcgatgccta tcgcgccggg
     3061 ctcctgtatg gacttatgaa taagtttgac tgggagacca ctgggcgtat tgccgccctt
     3121 ctgggcgcca tcaagatcga gcatcacggt acccagaacc accgtttttc tcgagcagaa
     3181 tttgaggcgc gttaccaaga gagtttcgga ttgagcattt aaccagcttc ttcttacgcg
     3241 cctcttgggc cctttccgtg aacagcgatc cctgtagttc gtccggcaag ggggcggcca
     3301 cggcctgtcc attctgtcgt tttatccaag ccacctcttg atagccaacc gcaagcttga
     3361 gccg
//
LOCUS       DASQSL010001247         1852 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_114789, whole genome shotgun sequence.
ACCESSION   DASQSL010001247 DASQSL010000000
VERSION     DASQSL010001247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1852
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114789"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1852
                     /gene="hrpA"
                     /locus_tag="VE844_12815"
     CDS             <1..>1852
                     /gene="hrpA"
                     /locus_tag="VE844_12815"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002808892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HZC02195.1"
                     /translation="WLEHYDTLIIDEAHERSLNIDLLLGYLKTVLPRRPDLKLIVTSA
                     TLDPERFSRHFDNAPIIEVSGRTYPVEVRYRPLYSQDENERDRSLEQAILEAADEISK
                     IDRGDILVFLPGEREIRETAQALRKHHPPDTEILPLYARLSAAEQNRVFQPHNRRHIV
                     LATNVAETSLTVPGVRYVIDTGLARINRYSPRTKVQRLVCEPITRASADQRKGRCGRQ
                     SRGICYRLYAAEDFEARAQFTDPEILRTNLASVILRLKSLHLGEVEDFPFIDPPDSRY
                     VKAGYKLLEELGAVDEVRQLTASGRQLARLPLDPRLGRMLLAGQTEHCLAELLIIVSA
                     LSVQDPRERPLEASQKADEAHRPFADERSDFLWYLNLWRFYEEQARHLSKNKLRTLCT
                     AHFLSYRRLQEWQDIHRQLKTLIHDLGFNINAVPADYAAIHRALLTGLLGNIGFKTEK
                     NEYTGARGIKFSIFPGASLFKKAPAWIMAAEIAETSRLYARTVAKIEPEWIEQVAGPL
                     LRRSYSEPHWEKRAGRVQALERVTLYGLTLVAKRKVDYTRIDPVECRRLFIQAALVEG
                     DYETRAAFFQHNRGVLEQVEDLQHRLRRLDILIDERDLFDFYDQRLPEGVV"
BASE COUNT          392 a          576 c          520 g          364 t
ORIGIN      
        1 gctggcttga gcactatgac accctcatca tcgacgaggc tcatgaacgc agtctcaata
       61 ttgacctctt gctgggctat ctcaaaacgg ttttacccag gcgcccggat ctgaagctga
      121 tcgtcacctc ggcgaccctc gatcctgaac gtttctcccg gcatttcgat aacgccccga
      181 tcatcgaggt ctccggccgt acctatccgg tcgaggtgcg ctaccggccg ctctattccc
      241 aagacgagaa tgagcgcgat cgcagcttag agcaagccat cctcgaagcc gcggacgaga
      301 tctcaaaaat agaccggggc gatatcctgg tgtttctgcc cggcgaacgc gagatccgag
      361 aaaccgccca agccctgcgt aagcaccatc ctcccgatac cgagatcctc cctctctatg
      421 cacgcttgag tgcagctgaa cagaaccggg tgttccaacc gcataaccgc cgtcatattg
      481 tgcttgcaac caacgttgca gagacctcgc tgacggtccc cggggtccgc tatgtgattg
      541 acacaggtct cgcccgcatc aaccggtaca gtccgagaac caaggtccaa cgcctggttt
      601 gcgagccgat caccagggcc tcggcggacc agcggaaagg gcgctgtggg aggcaaagcc
      661 gcgggatctg ttatcgcctc tacgcggccg aggacttcga ggcccgagct cagttcaccg
      721 atccggagat cctgcgcacc aatctggcct cggtgatcct gagactgaag tcactgcacc
      781 ttggcgaggt cgaggacttc cccttcattg atccgccgga cagccgctat gtgaaagccg
      841 gctataagct cctggaggag ctcggcgcag tggatgaagt acggcagttg accgccagtg
      901 ggcgacaact cgcccggctg ccgctcgatc cgaggctcgg tcggatgttg ctcgccggac
      961 agaccgaaca ttgcctcgcc gagctattga tcatcgtcag tgccctcagt gtgcaagacc
     1021 cccgggagcg tcctctagag gcaagccaaa aagccgatga ggcccaccgc ccctttgccg
     1081 acgagcgctc cgattttctc tggtacttaa acctctggcg gttttatgag gaacaggcgc
     1141 ggcacctctc caaaaacaaa ctgcgcacac tttgcaccgc ccattttctg tcctataggc
     1201 gcctgcagga atggcaggat atccacaggc aacttaagac cctgatccat gacctgggct
     1261 ttaacatcaa tgccgtaccg gccgattacg ccgcgatcca tcgggcgctg cttacgggtt
     1321 tgctcggaaa tatcggcttt aagaccgaga aaaatgagta cacgggtgca cgcgggatca
     1381 agttcagtat cttcccgggc gcttccctgt tcaaaaaggc gcctgcctgg atcatggcgg
     1441 ccgagatcgc cgagacctcc cgcctctacg ccagaaccgt cgccaagatc gagcccgagt
     1501 ggatagaaca ggtggccggc cccctgctca ggcgcagtta ctccgaacct cactgggaga
     1561 aacgggccgg acgggtacag gccctcgagc gggtcacgct ctatgggctg acgctcgtcg
     1621 ccaagcgcaa ggtggattat acccggatcg atcccgtcga atgccggcgc ctcttcatcc
     1681 aagcggcttt agtagagggc gactacgaga cacgggcagc ctttttccag cataatcggg
     1741 gagtattgga gcaggtcgag gacttgcagc accggctgcg gcgtctggat atcctcatcg
     1801 atgagcggga tctatttgat ttttatgacc aacgtctgcc ggaaggcgtg gt
//
LOCUS       DASQSL010001248         2463 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_197159, whole genome shotgun sequence.
ACCESSION   DASQSL010001248 DASQSL010000000
VERSION     DASQSL010001248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2463)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2463)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2463
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197159"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(44..843)
                     /locus_tag="VE844_12820"
     CDS             complement(join(44..507,507..843))
                     /locus_tag="VE844_12820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012492354.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZC02196.1"
                     /translation="MPKPLVTDELWTVVEPLLPEQPPKPKGGRPRVNDRAALTGILFV
                     LKTGIPWEMLPQEMGCGSGMTCWRRLKEWHKAGVWERLHRALLNRLGEADRIDRSRAS
                     LDSASVAAPGGGEKTGPNPTDRGKSGSKRHLLVDRCDVPLVVRHSAANVHDSRMLETM
                     LDAVSPIRRPRGRPGRPRKRPEKLHADKGYDFARCRQALRKRGIRSRIARRGIESSER
                     LGCHRWVVERTLAWLNRYRRSKVRYERRADVHQAFLSLGCALICWNHH"
     gene            1045..2307
                     /locus_tag="VE844_12825"
     CDS             1045..2307
                     /locus_tag="VE844_12825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013566753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OFA family MFS transporter"
                     /protein_id="HZC02197.1"
                     /translation="MAESAGIASQNVTNRWIIATAGVVMQVALGAVYAWSVFRVPLSD
                     AYGTGVSAVNTTFSIALLTLGFAAFFGGLWMNKSGPRIVALSAGVLYGAGIFLASFAQ
                     PSLWILYLTYGLMAGIGIGLGYIVPIATLVKWFPDKRGFITGIAVAGFGAGALLTAPI
                     AKQLVQGVGLFPTFAILGIVYLVMVVGAALFMRNPPEGWKPEGWEPEESGERTGVDYE
                     LGGALKTWQWYALWALLFLNVTAGIAIISEADPIAQEVSGVAPATAAWLVSIISVGNA
                     AGRFLWAWLSDAIGRKWVFLVMFLLQAALFFLLPVVGVSFVMLAILSFIIVSCYGGGF
                     GTMPAFNADYFGSKNVGMIYGLMITAWGFAGVLGPQLISIMYDATRSYAGAFYILAGI
                     MLVSSIVPFIVRPPKREAGAPAGAEARA"
BASE COUNT          468 a          737 c          726 g          532 t
ORIGIN      
        1 gaaatggcgg aaattctcta tcccgtatga gaaaaaagtg ttgctagtgg tggttccagc
       61 agatcaatgc acaccctaag ctgagaaacg cttggtggac gtcggcccgc cgctcgtagc
      121 gtacctttga gcgccggtag cggttcaacc aagccaaagt ccgctctacc acccagcgat
      181 ggcaccccaa acgctcactt gactcaatac cacgccgcgc gatccgggac ctaattcccc
      241 gcttgcgaag cgcctgccgg caacgagcga agtcgtagcc tttgtcggcg tgcagcttct
      301 cagggcgttt gcgtggtcga cccgggcggc cacggggacg acggatcgga gagacggcat
      361 cgagcatcgt ttcgagcatg cgcgagtcgt gaacgttagc cgccgagtgc ctcaccacta
      421 aagggacatc gcaccggtcg accaagagat ggcgcttcga gcccgatttg ccgcgatctg
      481 tcgggttcgg gcccgtcttc tcgccccccc gggggccgca acgctcgccg agtcgagtga
      541 ggccctagac ctgtcgatcc ggtcggcttc gcccaggcgg ttgagtagtg ctcggtgaag
      601 cctctcccac actccagctt tgtgccactc cttgaggcgc cgccagcaag tcatcccaga
      661 gccgcagccc atctcctggg gaagcatctc ccaaggaatt cctgtcttga gcacgaacag
      721 gatgcccgta agagctgcgc gatcgttcac gcgagggcga ccacccttgg gtttaggagg
      781 ctgctccggc aagagtggtt cgactacggt ccaaagttcg tcagttacga gtggtttcgg
      841 catggtcgga ggatacgcga tcacgtggtt ttgttagggg cacttagtca aattctctag
      901 tggatctatt aatagaagac tagacgcacg ttctaagtcc tatgatgtaa tagatagagt
      961 cggcatcagg ggaagtgcaa cacataacca taaccgaaac catgagtaac gctcagatcg
     1021 atgcaaagat agaatctgcc taggatggca gagtccgctg gaatagcaag ccagaacgta
     1081 acgaaccggt ggattatcgc tactgctggg gtggtaatgc aggtcgcctt aggggcggtc
     1141 tatgcttgga gcgtcttccg cgtaccgcta tccgatgcgt acggtacggg ggtctccgcg
     1201 gttaatacaa cgttcagtat cgcgctactg actttaggct tcgctgcctt cttcggcggc
     1261 ctgtggatga acaagtcagg tcctcgcatc gtagccctca gcgcgggcgt gctctacggg
     1321 gccggtatct tcctcgccag cttcgcacag cccagcctat ggatactcta cctgacctac
     1381 ggcctgatgg ccggcatcgg catcggactt ggttacatcg tgcccatcgc gaccctggtc
     1441 aagtggttcc ccgacaagcg aggcttcatc accggcatcg ccgttgccgg tttcggcgcc
     1501 ggtgcactgt tgacggcgcc gatagctaag caactcgttc agggcgtcgg actcttcccg
     1561 accttcgcca tcctcggcat cgtctacctc gtgatggtcg ttggcgcggc cctgttcatg
     1621 cgcaaccccc cggagggctg gaagcctgag ggttgggagc cagaggagag cggcgaacgc
     1681 acaggcgtag actacgaact ggggggtgcg ctcaagacct ggcagtggta cgcgctctgg
     1741 gcgctcctct tccttaacgt gaccgccggc atcgccatta tctccgaggc cgacccgata
     1801 gcacaggagg tgtccggcgt cgcccccgcg acggcggcgt ggctggtgag cataatctct
     1861 gtcggtaacg cggctggacg gttcctctgg gcctggttat cggacgccat cggccgtaag
     1921 tgggtctttt tggtcatgtt ccttctgcaa gctgccctct tcttcctttt gccggttgtc
     1981 ggcgtgtcgt tcgtcatgct ggccatcctc tccttcatca tagtctcctg ctacggcggt
     2041 ggcttcggga cgatgccagc gttcaacgcc gactacttcg gctccaagaa cgtcggcatg
     2101 atctacgggc tcatgattac cgcttggggg tttgctggcg tgctcggccc acagttgatc
     2161 tccattatgt acgacgcgac ccgcagctat gcaggtgcct tctacatcct cgcggggatc
     2221 atgctggtga gctccattgt cccgttcatc gttcgccccc cgaagagaga ggccggcgct
     2281 cctgccgggg cagaggcccg agcatagcag cggaccatta tagccgccac ttgagaacaa
     2341 ttcagtagcc ctccggaact accggagggc tcttcttgat atacaacccc acccatggat
     2401 agagagggtg gcatagcctc aacggtcttt tgtacggatc tttaacgcta ttagccacga
     2461 aga
//
LOCUS       DASQSL010001249         1013 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_89733, whole genome shotgun sequence.
ACCESSION   DASQSL010001249 DASQSL010000000
VERSION     DASQSL010001249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1013
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89733"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(90..>1013)
                     /locus_tag="VE844_12830"
     CDS             complement(90..>1013)
                     /locus_tag="VE844_12830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005961962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HZC02198.1"
                     /translation="ILGEALGVTLTSSVVFLLVGSGLGLAFGFTLQEALFIGVVSTFS
                     STIVGLKLLPTTALHHRHTGEVIISVLLLQDLMAIIALLLLQGYGKGGQLALDIGLQL
                     LSLPALIGLAYALEHFVLDRLIARFDQIHEYLFLLAIGWCLGLAQLAHAFGLSHEIGA
                     FIAGVTLAARPIALFIAESLKPLRDFFLILFFFSLGASFNIGILADLVLPAVIIASAV
                     LAVKPWVFQKLLVYAGEKPSLSLEIGIRLGQNSEFALLIAVLGVESRFINQEVSYLIQ
                     IVTLLTFIVSSYLIVLKYPTPIAVSDRLRRD"
BASE COUNT          284 a          268 c          277 g          184 t
ORIGIN      
        1 attgctcaca gcggtgctga ccgccgggat gtaagcgtga ccacggttaa ctggggtgct
       61 accggtaagt ccgacagact cctagactct cagtcccgtc gcaggcggtc ggatactgca
      121 atcggtgtgg gatatttgag cacgatcaaa tacgatgaga caataaaggt taacagtgtc
      181 acgatctgga tcaggtatga gacttcctgg tttataaaac gcgactcgac accgagcaca
      241 gcgataagca aggcaaattc actgttctgc ccgagccgta ttccgatctc tagggacaga
      301 ctcggttttt ccccagcgta taccagcagt ttttggaata cccaaggctt taccgcaagc
      361 actgccgagg cgatgatcac tgccggcaac acgagatcgg ccaatatccc tatattaaag
      421 ctcgctccca gggagaaaaa aaacaggatc aagaaaaaat cccgcagagg cttcaagctt
      481 tcggcgataa acaaggcgat cgggcgtgcg gccagggtga cgcccgcgat gaaggcaccg
      541 atttcatgcg ataaaccgaa ggcgtgggcc aattgagcaa ggcccaggca ccagccgatc
      601 gcgagcagaa agaggtattc gtggatctga tcaaagcggg cgatcaatct atccagaacg
      661 aagtgctcga gcgcatacgc aagcccaatc agcgcaggca agctgagcaa ttgcaagccg
      721 atatcgagag cgagttggcc acccttgccg tacccttgca gtaacaacaa ggcgatgatg
      781 gccatcagat cctgcagcaa gagcacactg atgataacct caccggtatg gcgatgatgc
      841 agggcggtgg tcggcagcag tttaagcccg acaatggtgc tcgagaacgt tgagaccacg
      901 cctataaaga gagcttcttg gagggtaaaa ccaaaggcga gcccgagccc tgagcccaca
      961 agcaaaaata ctacggaact cgtcagggtg actccaagcg cctcgcccaa tat
//
LOCUS       DASQSL010001250         1605 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_10824, whole genome shotgun sequence.
ACCESSION   DASQSL010001250 DASQSL010000000
VERSION     DASQSL010001250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10824"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1605)
                     /locus_tag="VE844_12835"
     CDS             complement(<1..>1605)
                     /locus_tag="VE844_12835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02199.1"
                     /translation="SRLAYEAEQTHLMDQIASLWRGALDRFERLAVPLGTQVQQFEQE
                     AAEITSERRLIEERITTLSRDRQTLASQQAVLVATGEVPSHEQLESARQRRDQGWQLI
                     RQGYIDKTADVSKRASDYDPHRPLPEAFEHNITRADRLADLLRTDSMRVTEYAVLNRH
                     LSEIDEDLAEAQRRKERLNTRSQYYDLRWDQVLAALDLPGLTPRQLVEWLEARGQILE
                     RLKASCEKAHEVQRLERAIEDGRKALEHALQATALGGVDPHEPLTVLLNRCRNSLRTL
                     TEQNRHRTKLETERDTLRHEREALETRLKQAEAKLNEWRGLWQSAVEPIGLEAQALPA
                     EVEARLDLLDELFKSLDHAARLTAEIQGHRDRVSGFSKELTELVQGVGIEPPGREAGD
                     VAEALYRQYQKAKQDRLKHHQLEERLREESGEASRLRTTIEHCQKRLQALCDQAHCTE
                     VSQLPKVEEQSRRKIALSTQIQAIEEQLAAQNGVPFSELLGEAQAEDRDSLPGRISDW
                     ASHIEVLENQRLELVRGSERLQSELRQ"
BASE COUNT          254 a          521 c          457 g          373 t
ORIGIN      
        1 ctgccgcagt tcactctgaa gacgctccga tccccgcacg agctcgagcc gctggttctc
       61 caatacctcg atatggcttg cccaatcact gatccgtcca ggcagactgt cgcggtcttc
      121 cgcttgagcc tcccccagca gttcactaaa aggcacgccg ttttgtgccg ccaattgttc
      181 ctcgatcgcc tggatctgtg tgctaagcgc gatcttccgg cgggattgct cttcgacctt
      241 gggcaattgg cttacctccg tgcagtgcgc ctggtcgcag agtgcttgta agcgcttttg
      301 gcagtgttcg atcgtggtgc ggagacggct ggcctcaccg ctttcttccc gtaaacgttc
      361 ttcaagctgg tgatgtttga gtcgatcctg cttggccttt tgatactgcc ggtacagggc
      421 ttcggccaca tcgccggcct ccctgcccgg cggttcgatt ccaacgcctt gcacaagttc
      481 ggtgagctct tttgagaacc ccgataccct atctcggtgg ccctggatct cggcggtcag
      541 ccgagcggcg tggtccaggg acttaaataa ctcatccagc agatccagcc gggcctcgac
      601 ctccgccggc agggcttggg cctcaagccc aatcggttcc accgccgact gccaaaggcc
      661 tcgccactca ttgagcttcg cttcagcctg tttgagccgc gtttctagag cttcgcgttc
      721 gtgccgtagg gtatcgcgct cagtttcaag cttagtcctg tggcggtttt gttcggtcag
      781 cgtacgcaaa gagttgcggc agcggttcaa aagcacggtg agcggctcat gcggatctac
      841 accgcccagc gcagtcgctt gtaaggcgtg ttccagcgcc ttccggccgt cctcaatcgc
      901 ccgctccagg cgctgcacct cgtgggcctt ctcgcacgag gccttgagcc gctcgaggat
      961 ctgcccacgc gcctccagcc attccacaag ctgcctcggt gttagccccg gtaaatccag
     1021 cgcagcgagc acctgatccc acctgagatc atagtactgg ctgcgggtat tcaagcgctc
     1081 cttacgtctt tgcgcctcgg ccaggtcctc atcgatctcg ctcaggtgcc tgttcaggac
     1141 cgcgtattcg gttacgcgca tggagtcagt gcgcaacaga tccgccaagc ggtcggctcg
     1201 agttatattg tgttcaaagg cctcgggcag cgggcggtga ggatcgtagt cagaggcccg
     1261 cttggaaaca tcggcggtct tgtcgatata gccctggcgg atgagttgcc agccttggtc
     1321 gcgccgttgg cgcgccgact ccagttgttc gtggcttggg acctcacccg ttgccactag
     1381 cacggcttgc tggctcgcca gggtctgccg atcccggctc aaggttgtta tccgctcctc
     1441 gatgagacga cgttcgctcg ttatctcagc cgcctcctgc tcgaactgct gcacttgcgt
     1501 tcccagtggc accgctagac gctcaaaccg atccagagcg ccccgccaga gcgaggcgat
     1561 ctggtccatc aggtgcgtct gttccgcctc ataggcgagc ctgga
//
LOCUS       DASQSL010001251         1192 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_131372, whole genome shotgun sequence.
ACCESSION   DASQSL010001251 DASQSL010000000
VERSION     DASQSL010001251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1192
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131372"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..440
                     /gene="lptA"
                     /locus_tag="VE844_12840"
     CDS             <1..440
                     /gene="lptA"
                     /locus_tag="VE844_12840"
                     /inference="COORDINATES: protein motif:HMM:TIGR03002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0001530 - lipopolysaccharide binding
                     [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HZC02200.1"
                     /translation="DETVQVTADRMMSDSRTDRVVFTGNVEARRGDLYVKADRLEVTQ
                     DRQSKKMAQMVATGNVLIRKGEQAATAERATFFENEQKAVLTGDPHAWEGSTEVWGEE
                     MVFLLAEGNMVVTGGTQRVRMQLLPPSNEGTKLPATKAKGRGG"
     gene            441..>1192
                     /gene="lptB"
                     /locus_tag="VE844_12845"
     CDS             441..>1192
                     /gene="lptB"
                     /locus_tag="VE844_12845"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008802012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HZC02201.1"
                     /translation="MSGLTASGLVKSYRRRRVLDEVCLTIGRGEVIGLLGPNGAGKTT
                     TFYVMVGLIHPEAGVVRLDGVDITSVPLYQRARAGIGYLPQEPSVFRGLTVEENILAV
                     LELQALSKRERLQKTTELLEEFGLERHRQRLTPSLSGGERRRVEIARALAASPTFLLL
                     DEPFAGIDPIMIEELQQLVCRLKERGLGVLITDHRVRETLEITDRAYIIHQGRILDSG
                     TPRQLAENEQVIATYFGERFALDIGQPWVSKP"
BASE COUNT          278 a          303 c          377 g          234 t
ORIGIN      
        1 cggatgagac cgtgcaggtg accgctgatc gtatgatgtc ggactcacgc accgatcggg
       61 tggtctttac cggcaatgtc gaagcgcggc gtggagacct ctatgtcaaa gcggatcggc
      121 ttgaggtgac acaggaccgg caaagtaaaa agatggcgca gatggtcgcc accggaaatg
      181 tcttaattcg caagggagag caagcggcca cggcggaacg ggcgacgttc tttgagaacg
      241 agcaaaaggc agtgttgacc ggagaccccc atgcctggga gggcagcacc gaggtctggg
      301 gcgaagaaat ggtgtttcta ctggctgagg gaaatatggt cgtcaccgga ggcacgcaac
      361 gagtccgcat gcaactcctg ccaccctcca atgaggggac gaaactccca gccacaaagg
      421 cgaaaggacg agggggatag gtgagcgggc tgacagcgtc tggcttggtc aaaagctacc
      481 gtcgacgtcg ggtgctcgat gaagtatgct tgacgattgg acgcggcgaa gtcatcggcc
      541 ttctaggacc caatggagcg ggaaagacca ccactttcta tgtgatggtt ggcttgatcc
      601 atccagaagc tggtgtcgtc aggttagatg gggtagacat tacatcggtg ccgttatatc
      661 agcgcgcacg agctggtatt gggtatctgc cgcaggaacc ttcagtcttt cgagggttga
      721 ccgtggagga gaatatcctg gcagtcctcg aactccaagc tctctcgaaa cgtgagcgtc
      781 tgcagaaaac gacggaactc ctggaggagt tcggccttga gcgccaccgc cagcggctca
      841 caccctcact gtccgggggc gagcggcgcc gcgttgagat cgcccgtgcc ttggcagctt
      901 ccccgacgtt tctgttgctc gatgagccat ttgctggaat tgacccgatc atgatcgagg
      961 agctgcagca actggtgtgt cgcctcaagg agcgaggtct tggggtattg attacagacc
     1021 atcgtgtgcg ggaaaccttg gaaattaccg acagggcata tatcattcat caaggccgca
     1081 tcctcgacag cgggacaccg cgtcaattgg cggaaaacga acaagtcatc gcgacgtatt
     1141 tcggtgaaag attcgccttg gacattgggc aaccatgggt ctcgaaaccg aa
//
LOCUS       DASQSL010001252         2074 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_131385, whole genome shotgun sequence.
ACCESSION   DASQSL010001252 DASQSL010000000
VERSION     DASQSL010001252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2074
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131385"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(417..1949)
                     /locus_tag="VE844_12850"
     CDS             complement(417..1949)
                     /locus_tag="VE844_12850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02202.1"
                     /translation="MSQLIAMIVRIDDMNKPEELNEVWSQPLPQVSLEGLEAVHYLDG
                     LEERVTEAGWALMRQLIVEQWGLTDQALVRAYQEQHRGTWVTADGYDELQVIGRFGVI
                     QLPRQVCYNAEADCHVLPGNTALPPHNGQVTTRGLQEWVCLLPQDVPFATAQRLLGWL
                     TRELEVISTTQVRRWVQHHGQLIRQSEQAEVQALLKHERLSDWQAHLAPLQAPRRPTA
                     WDQTLNEAVEQALVQPEPVAPAGVSASDWERVLQARREETEIERLRRLGPQLQPGEIV
                     ASTDDVGVRRPEKRRCLELRTACVRTATGYRYLSGAAQAVLQQLYLLLLLCGGLYSKL
                     TLLGDGARWIATFFKTQIACWPGSELIMDWYHLGKKCYELTSLIARGRVAKKALLGQL
                     LYHLWRGQLDEALALLEAYRPQAKDADSLETLIKYLSDRRAYLPNYKARRARRQYIGS
                     AHAEKANDLLVARRQKHQGMHWREASSDGLAALRTLLLNGGWDLYWKEQQVLPLAVLK
                     AT"
BASE COUNT          461 a          609 c          544 g          460 t
ORIGIN      
        1 tgacaggttt acatccgtgt gggcaacgca acggtgaaag cgaattcata aacttgcctc
       61 aattgaaaaa ttaggttgag ttgtcttcta atcttctcaa acccgcctac aagtgggcaa
      121 gattacttat gaatgaaact cacccactaa gcgaataact gatatataat tttccaattt
      181 ccgataaccc tacgttatcg gcaacgaggc cggcggcggg tggctaccgg acacggcggt
      241 ttgtttccag ataaacgaaa tcttgttgat tataggaaaa ggaactgaga agcgaggctc
      301 ttacttcgca gagtccaacc gcctctcccc gcgaacattt ctcgcgccct aaaaagaaaa
      361 aaattattga aaaaagcggt tgaaaaaatt gttagcgcgc caaagcgctg ggatggttaa
      421 gtcgccttta ggacggccaa cggcagcact tgctgctcct tccagtataa atcccacccg
      481 ccattaagaa gcagcgtgcg caacgccgcc aacccatcgc tggaagcttc gcgccagtgc
      541 ataccctgat gcttctggcg gcgagcgacc aataaatcgt tggccttttc ggcatgggcg
      601 ctaccaatgt actggcgtcg ggcgcgccgt gctttataat tcggcagata cgcgcgccgg
      661 tcgctcagat acttgatcaa tgtctccagg ctatcggcat ctttcgcctg tggacgatag
      721 gcctcgagca gcgccaaggc ttcatcgagc tggccccgcc agagatggta gaggagttgg
      781 cccagcaatg ccttcttcgc caccctccca cgcgcaatca ggctggtcag ttcgtagcat
      841 ttcttaccga ggtgatacca gtccataatc aattcgctgc ccggccagca ggcgatctgg
      901 gtcttaaaga acgtggcgat ccagcgggcg ccatcgccga gcagtgtcag tttggagtat
      961 aaccctccac acaacagtaa caacaggtac aattgctgta agacagcttg ggcagcgccg
     1021 ctcaaataac ggtagccggt ggcggtgcgc acacaggcgg tgcgtagctc gagacagcgc
     1081 cgtttttcgg ggcggcggac gccgacatca tcggtgctgg ccacaatctc gccgggttgg
     1141 agctgggggc ctagccgccg caggcgctcg atctcggtct cctctcggcg cgcttgcagc
     1201 acgcgctccc aatcgctggc cgaaacgcct gcaggcgcca ccggctcggg ttgcactaag
     1261 gcttgctcca ccgcttcatt caaggtctga tcccaggccg tgggacgccg gggtgcctgg
     1321 aggggggcta ggtgggcttg ccagtcgctc agccgctcat gtttcagcag cgcttgaacc
     1381 tccgcctgtt cagactggcg gataagctgt ccgtgatgct ggacccaacg ccgcacttgg
     1441 gtcgttgaga tgacttcaag ctcccgcgtt aaccacccta acaaccgctg ggcggtcgca
     1501 aacgggacgt cttgcggtaa caaacagacc cattcttgca acccccgggt ggttacctgg
     1561 ccgttatgag gcggtagagc ggtattgcct ggtaatacgt gacagtctgc ctcggcgttg
     1621 tagcacactt ggcgggggag ttggatcacc ccaaagcggc caatgacctg caattcgtca
     1681 taaccatcgg ccgtgaccca agtgccacga tgttgctctt ggtaagccct caccaaggct
     1741 tggtcggtca gaccccattg ctccacgatc agctgacgca tcagcgccca gcccgcctcc
     1801 gttacccgct cttccaatcc gtccaggtaa tgcaccgctt ccaacccttc cagactcacc
     1861 tgcggtaacg gctggctcca gacttcgttt agttcctccg gtttgttcat atcatcaatg
     1921 cgtactatca ttgctattaa ctggctcatg gtaatctcct gctacttagc cgactttgat
     1981 aaggctactg tagcagcgca ctccgtgagc cagttacctt aattcagcaa cccagcgctt
     2041 tgacgtgcta acaaaaattt taatgcacat taaa
//
LOCUS       DASQSL010001253         1063 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_146503, whole genome shotgun sequence.
ACCESSION   DASQSL010001253 DASQSL010000000
VERSION     DASQSL010001253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146503"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(136..810)
                     /locus_tag="VE844_12855"
     CDS             complement(136..810)
                     /locus_tag="VE844_12855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012373814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2959 domain-containing protein"
                     /protein_id="HZC02203.1"
                     /translation="MRLPVHPGVRPRTLLVLAVLVLASCQTAYYATLEKLGYPKRDLL
                     VSRVQQARDSQQAAKEQFQSALEHFRAVVNFRGGELEAKYNELSAELERSEARAHTVH
                     QRIAAVEEVAEALFKEWEAELGQYTQETLRRASARQLAQTRQRYTPLMSTMKRAEATM
                     APVLATFRDQVLFLKHNLNARAIASIRQEGAAVETEVTALIRAMEAAIAEADAFIKAL
                     DQGQGA"
BASE COUNT          207 a          319 c          304 g          233 t
ORIGIN      
        1 ctcaaaactc tcgctgtcat tccaggaaac gatcctctat gccttagctc ccgcagcata
       61 gagagcaggc gaagttatga gccaagcaga gatattcttg caaggctcta cctgaccaaa
      121 gggcaaaagt cgagctcagg ccccctgccc ttgatcgaga gccttgataa acgcatcggc
      181 ctccgcaatg gcggcttcca tggcgcgaat cagggccgta acctccgttt ccaccgccgc
      241 gccctcctgt cgtatggagg caatcgcccg ggcatttaaa ttgtgtttga gaaagagcac
      301 ctgatcgcgg aaggtggcga ggaccggcgc catcgtcgct tccgcgcgct tcatggtgct
      361 catgagcggc gtatagcgtt gccgggtctg cgccaactgg cgggcactcg cccgccgcaa
      421 ggtctcctgc gtgtattgcc ccaattcggc ttcccattcc ttaaagagcg cctcggccac
      481 ttcctcgacg gccgcaatgc gctggtggac ggtatgcgct cgggcttcac tcctctccag
      541 ctcggcgctg agctcgttgt acttggcttc gagctccccg ccgcgaaaat tgactaccgc
      601 ccggaagtgc tccagggcgg actgaaactg ctccttggcg gcctgctggc tgtcgcgtgc
      661 ctgctgaacg cggctcacca ggagatcacg tttggggtag cctagctttt ccagcgtggc
      721 gtagtaggcc gtctgacaac tggccagcac cagcacggcg agcacaagca gagttctggg
      781 acggacgcca gggtggacag gaagacgcat cactcacatt ccctcttcag gcatcacatg
      841 ggtcatgttg caacagtgga gatggtgact cctcggacaa ggccgtgcat gcttctgcat
      901 gcaggatagg gcattggggc cgcatgtcaa cgcagacctg cagcggcatt gtcaacttgt
      961 tgagtggctt gtctgcgctc acttgctgtg ccatacttgg aggtagttgt ctcatcacct
     1021 cgtctcagaa atcaaaattt tcttcctgca aagttggtga gta
//
LOCUS       DASQSL010001254         4774 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_131389, whole genome shotgun sequence.
ACCESSION   DASQSL010001254 DASQSL010000000
VERSION     DASQSL010001254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4774
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131389"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..277
                     /locus_tag="VE844_12860"
     CDS             <1..277
                     /locus_tag="VE844_12860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02204.1"
                     /translation="ILAYGLLMLGGGMILTSFSTSLWHFYLAYGVLCGLGFAATLQVV
                     ASSLVSNWFTRRRGFVLSLTGSGGAIGELLVVPLMMLLVLAYGWAAY"
     gene            complement(914..1804)
                     /locus_tag="VE844_12865"
     CDS             complement(914..1804)
                     /locus_tag="VE844_12865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011342417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HZC02205.1"
                     /translation="MNLSQLRYVQAVAETGSFTLAAERCYVTQPTLSNGIAQLEQEWE
                     ERLFTRTTRSVSLTPFGQRILPFIDKVLDAQVELLHETRNFVRPSRKVVRIGTSPLIR
                     AGWLVRMLEEFRKAHTDIEIILHEQNMTDLYRMLSDGLIDFVFGVADTRKTSWSTAFL
                     YREPLYYIPRGVNYPESDGPVTFESIASEAFVMVPNACGLARATRALFRHYRRKLNEY
                     PGEALSYQVLEEWAALGLGAAILPKSKLQSSERKTYALTNNKGKELSLDFEAVWLNTP
                     QCPVHFQQLTDFLAGYREDL"
     gene            2056..2337
                     /locus_tag="VE844_12870"
     CDS             2056..2337
                     /locus_tag="VE844_12870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020879670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02206.1"
                     /translation="MAYLEITLKVSNENRPAAAGVYKQYKEPFLKQIKGAQSKELLIR
                     NEDVQVLHGFASVADANAYLKSNLFTQDVVKALSPYLDAEPEVRIYDVA"
     gene            2594..3877
                     /locus_tag="VE844_12875"
     CDS             2594..3877
                     /locus_tag="VE844_12875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZC02207.1"
                     /translation="MSGLEDRYGNALTTSSRLACDAYIDGVDRLLAAGTDIDKTFQDA
                     VAVDEGFALAHIALARAKQVLGLGNEVKAPLERALVLAPDTSPREQSHIAIFHKILTG
                     QGTAAIPLIVEHLKAWPRDAMVLAPATSVFGLLAFSGKAGREVDLLALLEPLTPAYGD
                     DWWFRTVLAFAEIELQKHDNGMRNIDTALRGYPRNAHAAHIKGHLFYELGEREAGLSY
                     LTDWSKDYPREGQLHCHINWHLALWSLETGRRDQAWQIYRRALHPSSSWGPPINVLTD
                     CASYLLRAEMAGETVSPDLWRDVGAYAATWFPNSGVTFADMHSALAFAKSGDAEALRK
                     IRETPKGPATDILVPVVHGFEAFARQDWPRVVSELEPVLETHERVGGSRAQRDLLEYA
                     VTYALLRDGAKERARRLISKRRPQNGKSGFPLAGL"
     gene            4339..>4774
                     /locus_tag="VE844_12880"
     CDS             4339..>4774
                     /locus_tag="VE844_12880"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZC02208.1"
                     /translation="MTLERLRDEYDLARRYPQSVYTDLPEADVYWRPAPKSSGIGWHL
                     GHQAAINHILVRNVLAAEPSLNPQLDALFDAATPEEQRGMLPPLPAILTSREAIARRT
                     HAHIEAVLAGTRPAAQPATYAIGALLVSLIHHEYQHDCWVREM"
BASE COUNT          994 a         1340 c         1389 g         1051 t
ORIGIN      
        1 cattttggcg tacggcctgt tgatgctcgg cggcggcatg atcctgacct ccttctcgac
       61 cagcctgtgg cacttctatc tggcctatgg tgtgctctgt ggcctcggct tcgccgccac
      121 gctgcaagtc gtggcctcaa gcctggtctc gaactggttc acccgccgcc gcgggtttgt
      181 gctctcgctc acaggatcgg gcggggctat cggggaattg ctggtcgtgc cgttgatgat
      241 gctcctggtc ctcgcctacg gctgggccgc ctattaggcc ttattgacct ttaccttaat
      301 tagtttacaa gtcgagcctt aagaaccagg ataccagggc tcatatgtaa actcactttg
      361 gtgggtctca ataatataga gaagctgtca tacgccgcca cttgttacgt ttcggtcgat
      421 ccgaatacat cttgttagga gggcttgtgt gccgtaatga ggttatatcc gcccgtctga
      481 atgaccgatc gatgtctgta aagcccgctc tcattcgcca atcacggtgc tcaccagagg
      541 tgtaagcttg tctttcgtca tagatattga tgaggaatat atttgatacc acgctctcta
      601 aaggagagag acgggaatca tcgagaactt gccccaaaat atagattgga ctgccaggtt
      661 cgagaatcga gctgatattg tgcaacgctc gctgggcgtt atctcgcgac aagacctgga
      721 tgaacgatcg taaaacagcg acgtcatacg tacctgttag atgacccgag aggcgtctct
      781 tttggggcag ggtggctccg atgttgacga ccgaagcctt tcacgagtgg tatcaccgtc
      841 cccatgccac gttatctggc ggaaatccgc caggatttaa gtcaaaccac actaattccc
      901 agataaagct tgtctataag tcttcgcggt atccagccaa gaagtctgtc aattgctgaa
      961 aatgaacggg acactggggc gtattcagcc atactgcctc aaaatcaagg ctaagctctt
     1021 ttcctttatt attcgtcaaa gcgtatgtct tgcgttctga cgattgtagc tttgatttag
     1081 gcagaatcgc ggctcctagg cccaaagcag cccactcttc cagcacctga taactcaatg
     1141 cttcgcccgg atattcgttg agcttgcgtc ggtagtgcct gaaaagggca cgggttgccc
     1201 gagccaaacc gcacgcattt ggaaccatga cgaaggcttc actcgcgatg ctctcaaatg
     1261 tcacgggccc atcactttct ggatagttga cgccacgcgg aatatagtaa agcggttctc
     1321 ggtatagaaa cgctgtactc caagatgtct tgcgtgtgtc cgcgacacca aacacgaaat
     1381 ctattagccc atcgctcagc atccgataca ggtccgtcat gttctgttca tggagtatga
     1441 tttcgatatc ggtgtgcgct tttcggaact cctcaagcat gcgtacaagc cagcctgccc
     1501 gaatgagcgg agacgtgcct atcctgacca ccttccgtga aggacgtacg aagtttctgg
     1561 tttcgtgcag gagttcaacc tgtgcatcca gcaccttgtc tatgaaagga agaatccgtt
     1621 gtccgaatgg agttaatgac acgctgcgcg ttgtgcgcgt gaacaggcgc tcctcccatt
     1681 cctgctcaag ctgagctatg ccgttggata gcgtgggctg cgtaacatag caccgttctg
     1741 ctgcaagagt gaaagaccca gtttcggcaa cagcctggac gtatctcaac tggctcagat
     1801 tcatatgggt cctcgctgtt tcgtcaggat aattttgcgt gggaatgcgc gcgtctggcc
     1861 ggcggattat gttgctcgca tctttataac ccattgtttt agcagagtgt ttccaagggc
     1921 atgcgagctc aatttggtat ttatagtata tagaaataaa tcgcatgtga aaagacaatt
     1981 tctctcatga cgccgggtaa ggtattgtca acttagcagc cattccgctg caaaaaaatc
     2041 acagggagga agacaatggc ttacctcgaa attaccctga aggtgtcgaa tgaaaatcgt
     2101 cctgccgccg ctggtgtgta taaacagtac aaagaacctt tcctgaagca aatcaagggc
     2161 gcgcaatcca aggagctcct catcagaaat gaggatgtcc aggttctgca cggtttcgcc
     2221 agtgttgccg atgccaacgc ctacctcaag agcaacctct tcactcaaga tgtggtgaag
     2281 gcgctcagcc cgtatctgga cgccgaacca gaagttcgca tttacgacgt ggcttaatcg
     2341 actggtgaaa cggtgaggca gataccttta aaagtcgtcg gcttcaagct gcattactcc
     2401 tcaagaggac agggcttctt atcctcttga gagttgcttc cacctgtgtg aagcggtcgg
     2461 gaaccggact ggcgtaccag atatggccgc gtcgatccgg ccgaccggga acggctgctc
     2521 acgctcggcg atgagcggcg gcggcaacgc gcggaacgcg cttcgatgaa ccaacagaag
     2581 gagcaggaaa agaatgagcg ggcttgaaga tcggtatggc aatgcattga cgacgagttc
     2641 gcgcctcgcc tgcgatgctt atatcgacgg tgtcgacagg ctgctcgccg cgggtacaga
     2701 cattgacaag acgttccagg atgcggtggc ggtcgacgag ggctttgccc ttgcgcacat
     2761 cgctctggcg cgtgccaagc aggtgttggg tctcggcaat gaagtcaaag cgcctttgga
     2821 gcgagctcta gtccttgccc ccgacacgtc gccgcgcgaa cagagccaca tcgcgatctt
     2881 tcacaagatc cttaccgggc agggcacggc cgcgatcccc ctgatcgttg agcatctgaa
     2941 ggcatggccg cgggacgcga tggtactggc tccagccacc agcgtatttg gtctccttgc
     3001 cttctcgggt aaggccgggc gcgaagtcga cctgctcgct ctgcttgaac cgttaacgcc
     3061 ggcatacggc gacgactggt ggttccgtac agttctagcc tttgccgaga tcgagctgca
     3121 aaagcacgac aacggtatgc ggaacatcga tacggcgttg cggggctatc cgcgaaacgc
     3181 gcacgccgcc cacatcaaag gtcatctgtt ctatgagctg ggagagcgcg aggcgggtct
     3241 gtcctatctc actgactgga gcaaggacta tccgcgcgag ggccagctgc actgccacat
     3301 aaactggcat ctggccctgt ggtcgctgga gacgggccgc cgggaccagg cctggcagat
     3361 ctaccgccgg gcgctgcacc caagcagctc gtggggccct ccgatcaacg ttctcaccga
     3421 ttgcgcgtcg tatcttctgc gcgccgagat ggctggcgag acggtgtcgc cggacctgtg
     3481 gcgggatgtc ggagcgtacg cggcgacgtg gttccccaac tccggggtca cctttgccga
     3541 tatgcacagt gcgcttgcct tcgccaagtc gggagatgcg gaggcactgc gcaagatcag
     3601 ggagacgccc aagggccctg ctaccgatat cctggttcct gtcgttcatg gttttgaggc
     3661 gttcgcgcgc caggactggc ctcgtgtcgt ctcggaactc gaaccggtgc ttgagacgca
     3721 cgagagagtc ggcggcagtc gggcgcagcg cgatctcttg gaatatgccg tgacatacgc
     3781 cctgttgcgc gatggcgcga aagagcgtgc gcggcgccta atctccaagc gccggcctca
     3841 gaacggaaag agcggatttc cgctcgccgg cctctgacga ccatcccacc aggtcgctgg
     3901 caggcttcgt ccagcccagg gctttggtga tcctccagac ctgaacaatg atggggtgcc
     3961 gagaatgatc gttgtcgtcg tccccctccc cgtggcgaag cgctcccgtg aagccgccgt
     4021 cgaagcggcg cgcagccagg cgtggcgcgg ctttgcgcgc tctggacatg cagctcagga
     4081 taggttaggg ttgagtcttg gggatttacc aagggcgtgg gcctcaggac caccggtttg
     4141 aagacgctga ggggtactga gaggcgtcgc tgtcgccaga agcccgcgct ccggggagtc
     4201 cggtagtgcc ctcgaggtaa tgcgcgcttt acgccgcagg tggtgacaat accgtgtggc
     4261 caccgccgtg gagcaacgag gcgacgtcca gaccgccccg cagggcgctg gaggtcgtca
     4321 gggagagagg ggagagtcat gaccctcgag aggctacgtg acgagtacga tctggcgcgg
     4381 cgttatccgc agagcgtgta taccgatctg cccgaagccg atgtgtactg gcgcccggcc
     4441 cccaagagca gtggcattgg ctggcatcta ggtcatcaag ccgccatcaa tcatattctc
     4501 gtgcggaatg tgctggcggc tgagcccagt ctcaatcccc agttggatgc cctctttgat
     4561 gcagccacgc cggaggaaca gcgcggcatg ctgccgccct tgccggccat cctcacgtct
     4621 cgtgaggcca tcgcccgccg cacccacgcc catattgagg cggtgttggc cggcacgcgc
     4681 ccggccgccc agccggcgac gtacgccatc ggtgcgctcc tggtcagtct gattcaccat
     4741 gaataccaac acgattgctg ggtgcgggaa atgc
//
LOCUS       DASQSL010001255         1598 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_34062, whole genome shotgun sequence.
ACCESSION   DASQSL010001255 DASQSL010000000
VERSION     DASQSL010001255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1598
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34062"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            246..1559
                     /locus_tag="VE844_12885"
     CDS             246..1559
                     /locus_tag="VE844_12885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02209.1"
                     /translation="MRKLILIPTDGTAHSVYLTAGAINSLIQTLPSGTAYCIGIVLIV
                     MMRGRLMQHKGSLARAVLPLVIHLRWGWHRVERAMERGKFLLDGLFDRAYEWCLTQLD
                     VEPVRLGCQQREVTALDSSTIARLRCRVGKAALLGKGYCHRAGRAVRANIVAAAVSVG
                     LIHGVRLGLVRRVRFGASCEAAVSKLFADLPKSAAARLIIVDAGIATKEQFATATAHD
                     ALLGRLRRNCKLRCAPPPPNGKRGRNPIHGPVLHPGRAEPEVAPDEDFTLPGEAGLIR
                     LRRWKEVHWEGYHQTPVDVLRVDDPTYKEPLLVGTTARELTTEELWQAYPHRWPVETL
                     FYIGAETTATEKPRAWTEQAVERRIGLGLLSGSLLKAIAAMDEGLAMGPWDKKPQPSA
                     GRLANHLEIHIDNLSTRALEGVQARNYRKNPGAAQTQDLQLKKTA"
BASE COUNT          322 a          412 c          523 g          341 t
ORIGIN      
        1 ttcctatgca cagggcctca tccttgatgt taccggctcc actgccgcag gcactgggct
       61 ctttgccatc gcaaccggcc agggccagta tgccagctcc aagcagaatg cttgtaatat
      121 gcagtgcctt ggttttcatg tgtccctcct ttgatagatt agttttttcg ttgcgagact
      181 cataaactcg tgttttacca atttgagtag caattagcgg tcgaatccag gaagctagga
      241 gggttatgcg caaactaatc cttattccga cggatgggac cgcccattca gtgtatctaa
      301 cggcgggggc gattaatagc ctgattcaga ccctgccctc aggcacggct tattgcattg
      361 gcatcgttct gattgtgatg atgagggggc ggctgatgca gcataaaggc agtttagcgc
      421 gtgctgttct gccacttgtt atccatttga gatggggctg gcaccgggtt gagcgggcga
      481 tggagcgtgg caagtttttg cttgacgggc tgtttgatcg ggcctatgag tggtgtttga
      541 cccaactgga cgttgagccg gtgcgcttag gctgccaaca gcgggaggtc acggcgctag
      601 acagttcgac catcgctcgc ctgcggtgcc gcgttgggaa agcggccttg ttgggtaaag
      661 ggtactgtca tcgtgcgggg cgcgcggtgc gtgccaacat cgtggcggcg gcggtgagtg
      721 ttggcttgat tcatggcgtg cgcctcgggt tagtgcggcg ggtgcgattt ggcgcgagtt
      781 gtgaggcggc ggtgagcaag ctctttgcgg atctccccaa gagtgcggcg gcgcgcttga
      841 tcatcgtgga cgccgggatt gcgaccaaag agcagtttgc gacagccacg gcccacgatg
      901 cgctgctcgg acggttgcga cgcaactgca aactgcggtg cgcgccaccc ccgcccaacg
      961 gcaagcgcgg gcgtaacccg atccacgggc cggtactgca tccagggcgt gccgagccgg
     1021 aagtagcccc cgatgaggac ttcaccttgc ccggtgaagc cggtctgatc cgtctgcggc
     1081 gctggaagga ggtgcattgg gaagggtatc accagacgcc ggtggatgtg ttgcgcgtgg
     1141 atgatccgac ctacaaagaa cccttgttgg taggcacgac ggcgcgcgag ctgaccaccg
     1201 aggagctgtg gcaagcttat ccccatcgct ggccggtgga gacgctgttt tacatcggcg
     1261 ccgagacgac cgccacggag aagccgcggg cgtggaccga gcaagccgtt gagcgccgca
     1321 tcgggttagg gttgttgagt gggtcgttgt tgaaagcgat cgcggcgatg gatgaagggc
     1381 tagccatggg gccctgggac aagaagcccc aaccgagtgc cgggcggtta gctaaccact
     1441 tggagattca catcgacaat ttatcgacac gtgcccttga aggggtccaa gcgagaaact
     1501 atcgaaaaaa tcccggagcc gctcagacac aggacttaca gctcaaaaag acagcctgaa
     1561 tttggtaaaa cacgagaagt ctgtagatgt atagaaaa
//
LOCUS       DASQSL010001256         1069 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_146523, whole genome shotgun sequence.
ACCESSION   DASQSL010001256 DASQSL010000000
VERSION     DASQSL010001256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146523"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..141
                     /locus_tag="VE844_12890"
     CDS             <1..141
                     /locus_tag="VE844_12890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014088040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HZC02210.1"
                     /translation="PNDCVAVVATVPLTDNETWTAMAPGQFLQFHNGKPLTERCLLGR
                     FM"
     gene            complement(175..606)
                     /locus_tag="VE844_12895"
     CDS             complement(175..606)
                     /locus_tag="VE844_12895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02211.1"
                     /translation="MLVACLLGAMAWGSAVVARAETPYEANPGLIPMGLFTVFFNAEG
                     PLSYATLTPGDLPAEAVPLGTVKGRGCQYGVSIPIGGNSFITRVSGAVGRGGYEKALR
                     EIRDHHPGLKGIYDVKVDEHILNILTVFERLCVEVTAKGFR"
     gene            complement(615..968)
                     /locus_tag="VE844_12900"
     CDS             complement(615..968)
                     /locus_tag="VE844_12900"
                     /inference="COORDINATES: protein motif:HMM:NF024546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRL domain-containing protein"
                     /protein_id="HZC02212.1"
                     /translation="MTRLFLVMILLLTVLIASDCGLLYTDIRLPRAYHSATPSDVKTH
                     PADKIASGEACNQSILYLIAWGDASYAAAVARALSGEGDAILYDVKADIKATNILFGL
                     YARVCTIVTGKVARL"
BASE COUNT          246 a          311 c          278 g          234 t
ORIGIN      
        1 cctaatgatt gcgtcgctgt ggttgcgacc gttcctctca ccgacaatga gacatggacg
       61 gcgatggcgc cgggccagtt tctgcaattt cacaatggca aaccgttgac cgaacgttgc
      121 ttattaggca gattcatgta atttcgcacg ctaagcggtt gggtccatta gcagttacct
      181 aaatcctttg gccgtgacct cgacgcatag cctttcgaac acggtcagga tattcaatat
      241 gtgctcatcg accttgacgt catagatccc tttcagccca ggatgatggt cgcggatctc
      301 cctaagcgcc ttttcgtaac cgccgcgtcc tacagctccc gagacacggg tgatgaaaga
      361 gttccctccg atagggatcg agaccccata ctggcatcca cgccccttca ctgtcccgag
      421 cgggaccgcc tcagccggta agtcgcctgg cgtcagagtg gcatatgata atggcccctc
      481 cgcgttaaag aaaaccgtaa agaggcccat cggaatcagt ccagggttcg cctcatacgg
      541 cgtctccgct cgggcgacta ccgctgatcc ccacgccatt gctccaagca aacaggcaac
      601 cagcaccacc tccctcatag gcgggccacc ttccccgtca cgatagtgca gacccgggcg
      661 tagagtccga agagtatgtt tgtcgccttg atgtcagcct tcacatcata caggatggcg
      721 tccccctcgc cactgagtgc cctcgctaca gcggcagcgt agctcgcatc gccccaggcg
      781 atgaggtaga gaatactttg gttacatgcc tctccagagg ctatcttgtc ggcaggatga
      841 gtcttgacat cggagggtgt cgcggagtgg taagcgcgcg gcaaccggat atcggtatag
      901 agcaggccgc aatcagaagc gatgagcact gtcagaagaa gtatcatcac gagaaatagc
      961 ctggtcatac actgaatctc tcaagggggg gtaaatgtaa ggatagggtt ttcaacaccc
     1021 tttttcaatc tatagctata actgtagcgg cccgcaatac taatcggcc
//
LOCUS       DASQSL010001257         1420 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_131444, whole genome shotgun sequence.
ACCESSION   DASQSL010001257 DASQSL010000000
VERSION     DASQSL010001257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1420
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131444"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(295..744)
                     /locus_tag="VE844_12905"
     CDS             complement(295..744)
                     /locus_tag="VE844_12905"
                     /inference="COORDINATES: protein motif:HMM:NF025063.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HZC02213.1"
                     /translation="MTTVGVEVVLQAARERIPGATPRIISDNGPQFIAKDFKEFIRLC
                     TMTHVRTSPFYPQSNGKLERLTKSLKGKCIRPNSPVSLSDARCLVATYVEHYNTVRLH
                     SALGYVTLQAKLEGREGAIFAECQRRLAQARAARLMAYRTQHEGVAA"
     gene            complement(701..994)
                     /locus_tag="VE844_12910"
     CDS             complement(701..994)
                     /locus_tag="VE844_12910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02214.1"
                     /translation="MIDEDRVACAPSTVYRVLKSAGLLQAWEVKASSKGQGFEQPTAA
                     HEHWHIDIAYLNLGGTFYSLCSVLDGYSRVIVHWALRGDDDHGRGRGRAAGGP"
BASE COUNT          268 a          449 c          408 g          295 t
ORIGIN      
        1 tggatgacgc gctaagggat agtaatcagg tcataacgaa gtgtgctggt tcagcggaaa
       61 tcggaatttt ggcctgccat tttgagttgg ctgccagggg ttctggcagt caactgttaa
      121 ggggaaaaga tctgctcggc ccctcaactg catagtgtta ttagaaccgg gcacccgccc
      181 ccggtcaagg aactgatctt cggcactcct gcttgaccgg cgctgtgcgc gaggtcaaga
      241 gggttaccct gcagttgagc ggcccggtgc gccgtgtgtt catcagaccc cgtctcatgc
      301 ggccacgccc tcgtgctgtg tccgataggc catcagacgc gctgcccgtg cctgggccag
      361 acggcgttgg cactcggcaa agatcgcccc ctcgcggcct tcgagcttgg cctggagtgt
      421 gacatagccg agggcactat gcaaccgcac ggtgttgtag tgttcgacgt aggtggccac
      481 caagcatcgt gcatcgctca gcgagaccgg cgaattgggc cgaatacact tccccttcaa
      541 ggacttagtg agccgctcaa gcttgccgtt gctttgggga tagaacggtg aggtccgcac
      601 gtgggtcatc gtgcacaacc ggataaactc tttgaaatcc ttggcaatga attggggacc
      661 gttgtccgag atgatgcgcg gggtggcgcc cggaatacgc tcacgggccg cctgcagcac
      721 gacctcgacc ccgaccgtgg tcatcgtctc ctctcaaggc ccagtgcaca atcacgcggc
      781 tgtagccatc gagtacgctg catagagagt agaacgtgcc gccgaggttg agatacgcga
      841 tgtcgatgtg ccagtgctca tgggctgcgg tgggctgttc aaagccctgg cccttcgagg
      901 aggctttgac ctcccaggcc tggagcagcc ccgcgctttt cagcacccga tacacagtgc
      961 ttggcgcaca ggcaacacgg tcctcatcga tcatgcacta gcacagccgc cggtaaccct
     1021 ccagcggatg ctcccgggca aaggtgatga ttgcctcgcg ttcccagggc tgcaacccgt
     1081 gacggctcgg gatctgaccg ttatgccgat taggtggcct tgacggcgct tccagtcgta
     1141 atagttgccc ggtgcaagcc ctaagagccg taacagccgc ttgcgcggca ttcccacccg
     1201 ccttatgccg taatcaaccc gttccactac cgcctcaccc acctcgggtt tgacccagcg
     1261 ccccttcaaa ggaccccaga gtttttttta accctgacct aggctcccgt gacctcggcc
     1321 agcacctcat tcttgcgcgc caactgcccc tctagcgccg ttatctgctt cgtcaaggac
     1381 ttgacctgcc cccaggactc cttcgcaaag gcggccccac
//
LOCUS       DASQSL010001258         1133 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_131446, whole genome shotgun sequence.
ACCESSION   DASQSL010001258 DASQSL010000000
VERSION     DASQSL010001258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131446"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(745..945)
                     /locus_tag="VE844_12915"
     CDS             complement(745..945)
                     /locus_tag="VE844_12915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02215.1"
                     /translation="MVAVKRRRGLYPSPALLIDTPHPATWMILLAVQALVGHRDGNVG
                     TLFGTARKDKGFARSPSEWRKQ"
BASE COUNT          223 a          329 c          336 g          245 t
ORIGIN      
        1 cttctcctgt ccgggggcga aggctcccat gctcgtaggc accccgatca gacccaacgt
       61 cttagccatg ctttcctccc cgtcggatga tttaaccaaa cccgtcggac cacacaagcg
      121 ctagttccct tcacgtcgct accatagacg cgccccgttg ggggcgcaag gcgagacggt
      181 ccgcgctctt cggtgcgccg cgcggtagag acgtaggaga agatccttgc cgagagactc
      241 gagcgggaca gccaactcta tacgagcagg ggggatgttc gagaaagtat tgggatcgtg
      301 gacctgcgtc gcgttttgtc gcgcttgctc ttccaggctc ctacccggca aattacctct
      361 tagttcctga gaggggtgcc gcaccgcctc tagagaacct ttgcatttga tcgtcatgag
      421 cggcatggtc ctcacagtcc ttatatctac ggatatcctg acttaccggc ttctggtacg
      481 ctcaccacgg ttaccgttgt caccgccgtc atcgcttttg ggaggggtgt ctctacctat
      541 gatgggaaca cacgcacgtc ttcttcagtg tgtctgtagc gtgagagcgg aaggggatac
      601 cgcggattct tggtggcacc ggtgacggcg gtgacagcct gcacgttatg tgacccgacg
      661 aattgtgcaa ccttgccata ctgacctagc gtggccttta aagacctgca cacgggattt
      721 cgcacccgag gaggtggagg atcttcattg tttacgccat tcagatggtg agcgggcaaa
      781 gcccttgtct ttgcgcgcag tgccaaagag cgtgcccaca ttcccgtctc ggtggccgac
      841 caacgcctga acggctagca ggatcatcca ggtcgcggga tggggcgtat ctatcagtaa
      901 cgctggagac gggtatagcc cccgacgacg ttttactgcg accaagcgga ggatcatgaa
      961 cgacacccgg atggataaca ggagtttgcc caggatctca gcaccgggtc tgttggtctt
     1021 ctttctcgcc ctcgccctgg cttcctgcag cggcacaggc gatggcaaga acgccggtgg
     1081 acaggctggc ggggacagga caaagcaagc tgcctcgggg actgagcgct ata
//
LOCUS       DASQSL010001259        10066 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_89787, whole genome shotgun sequence.
ACCESSION   DASQSL010001259 DASQSL010000000
VERSION     DASQSL010001259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 10066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10066
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89787"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..829
                     /locus_tag="VE844_12920"
     CDS             <1..829
                     /locus_tag="VE844_12920"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HZC02216.1"
                     /translation="ADHSVLKTLLAYNTYLRSGGYSKYTPDDFTSDVKKFGLFVKDKK
                     LKEIKLVDIQQWIGEIKKVMKEKTVSRKISAIANYFNWLAQEKVLTENPAQSITYLRV
                     TSPLPDILFDEECQKLLAAASADPRSYLLVLLFLETGIKKEELFDLKLVHFDLSNKYA
                     PELWLKHTGKKAKKDRKLKLPHEIVSVFHDYVKQYGIAEVLFPYTPRFIEMILTDTAK
                     RAELQKKVTAGILRDTFVVRCLRRGEEIENVLVKIGLSAATGEDAKEKYLKLAGRAI"
     gene            1197..1952
                     /locus_tag="VE844_12925"
     CDS             1197..1952
                     /locus_tag="VE844_12925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015178638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family zinc transporter"
                     /protein_id="HZC02217.1"
                     /translation="MWLHAAGWGLLSGAGLLVGAAISYFIPLSHRVISSVMGFGGGVL
                     LSVLAFELMNEAAEHGSLISAIASFLVGALVFCTVNWFLSQHGAKNRKRCGGCVQQPT
                     EAEQKGSGVAIAAGALLDSIPESIVIGMSLISGGSVGIPAVVGFFLANVPEGLSSASG
                     MKQAGRSFVYIFGVWTSIVLLSGVGAVVGYTVFGQFPPEAAALVMAFAGGAILAMVAE
                     TMIPEAFEGAPSFIGLIATIGFLCAFALHKMSD"
     gene            1996..2280
                     /locus_tag="VE844_12930"
     CDS             1996..2280
                     /locus_tag="VE844_12930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02218.1"
                     /translation="MALPYVPVSCDLYEKLEEYAVRRRQCDILYRDDVGQTLTIRDRI
                     VSLSVQDKVEYVRLEGGSSIRLDALIELDGMSLPANAYHQQDISGAIERE"
     gene            2234..2818
                     /gene="msrA"
                     /locus_tag="VE844_12935"
     CDS             2234..2818
                     /gene="msrA"
                     /locus_tag="VE844_12935"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012874263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HZC02219.1"
                     /translation="MLIISRIFQEQSNVNSENLETITLGAGCFWCVEAVFNELQGVRK
                     VVSGYAGGHLPNPTYREVCDKSTGHAEVVQIKFDPQQISLRELLDVFFTTHDPTTRNQ
                     QGADVGSQYRSIILYQSPQQKQIAEEVTADFNARKIWAAPIVTEIKPLEAFYPAEPEH
                     LQYYQRNPDKAYCRIVIEPKVAKLRNQHMEKLRK"
     gene            2951..3373
                     /gene="msrB"
                     /locus_tag="VE844_12940"
     CDS             2951..3373
                     /gene="msrB"
                     /locus_tag="VE844_12940"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002617212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HZC02220.1"
                     /translation="MVDKLHLSEEEWKRRLTPEEYRVLRQHGTERVGSGCFLKTKDPG
                     TYVCAACGNPLFKSGEKFESGTGWPSFTSPVTQEAVSEYDDSSYGMRRTEVRCGRCDG
                     HLGHVFPDGPAPTGLRYCINSVSVKHVAEGEPIPLVTS"
     gene            4036..4248
                     /locus_tag="VE844_12945"
     CDS             4036..4248
                     /locus_tag="VE844_12945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02221.1"
                     /translation="MEAPITMGINHKPAPELLVPYWIDGLGSWWESALYSEAERAALA
                     YCGALTEGNRLNITFDLAPSNDPGLS"
     gene            4274..4521
                     /locus_tag="VE844_12950"
                     /pseudo
     CDS             4274..4521
                     /locus_tag="VE844_12950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611490.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(4546..4914)
                     /locus_tag="VE844_12955"
                     /pseudo
     CDS             complement(4546..4914)
                     /locus_tag="VE844_12955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007792578.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
     gene            complement(5047..5331)
                     /locus_tag="VE844_12960"
     CDS             complement(5047..5331)
                     /locus_tag="VE844_12960"
                     /inference="COORDINATES: protein motif:HMM:NF016109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQ-loop repeat-containing protein"
                     /protein_id="HZC02222.1"
                     /translation="MENLLSVIGYIGTGLVIGAYAPQIWHLWTEHCSAGISERAYALW
                     VLASALFLGHSIIIGDAVFMVTQLVNMVNMAIILVLARRFRNQICAAHAR"
     gene            complement(5719..6699)
                     /locus_tag="VE844_12965"
     CDS             complement(5719..6699)
                     /locus_tag="VE844_12965"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018900508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HZC02223.1"
                     /translation="MKEDPAAHARALTRRMHAVRVHQFGGLEAIVYEEVSRPVPGAGQ
                     VLVRVKAAGVGPWDAWVRAGKSVLPQPLPLVLGSDLAGVIEEVGPGISNFRPGEAVFG
                     VTNAQFTGAYAEYAACKAGMIAKKPRTLSFVEAASAPVVAVTAWQMLFDEAKLKAGQV
                     AIIQGAAGSVGRYAVMLARTAGIHVIASALQKDLDQLRELGANEVTPSSELGRYEGTV
                     DAAIDLVGGPSRSQLLVCVKPGGVLVTAVPPPPTAEEAASRGVKASFMLVHVETRYLD
                     ELTARFEAGQIRPNVGTVLPLADARSAHEMLDGIRPASPGKIVLELEPGT"
     gene            complement(6745..7170)
                     /locus_tag="VE844_12970"
     CDS             complement(6745..7170)
                     /locus_tag="VE844_12970"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HZC02224.1"
                     /translation="MECKAIRSSAYTATVLLVVGLLSCGSVAGAQSSGVDHTPVTSQE
                     LPHDPGRSLTAIVVALAPGAKAASHRHADIVFAYVLEGTVRSQLNGGDVIEYSAGQSW
                     VEPPGTVHTRTENPSQTMPARHLAVFIAPTGAQLTTVDK"
     gene            complement(7308..7688)
                     /locus_tag="VE844_12975"
     CDS             complement(7308..7688)
                     /locus_tag="VE844_12975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014264208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HZC02225.1"
                     /translation="MKQMLIVLCLITGTAVAQETTVTPLISKELTGIPGKEATMITVQ
                     YDRGASDVIHRHNAHVFVYVLEGRVVMQVQGGEQPTLGPGQTFYEGPDDVHLVSRNAS
                     STEPAKFLVFFVKDKGAPILIPVK"
     gene            7883..8110
                     /locus_tag="VE844_12980"
                     /pseudo
     CDS             7883..8110
                     /locus_tag="VE844_12980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015959823.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit I"
     gene            8107..8214
                     /locus_tag="VE844_12985"
                     /pseudo
     CDS             8107..8214
                     /locus_tag="VE844_12985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004163212.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
     gene            complement(8166..8462)
                     /locus_tag="VE844_12990"
     CDS             complement(8166..8462)
                     /locus_tag="VE844_12990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02226.1"
                     /translation="MRWPRLATARHWGAGIARLPVLSPMSSISVLDEAAYPVGSRLAM
                     PRREPTAMQPVHQLDRNITGGWAVMDQHYFIAALIPLVVSSRATEPKSLSEATP"
     gene            8513..9409
                     /locus_tag="VE844_12995"
     CDS             8513..9409
                     /locus_tag="VE844_12995"
                     /inference="COORDINATES: protein motif:HMM:NF025677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase zinc-binding domain-containing
                     protein"
                     /protein_id="HZC02227.1"
                     /translation="MDTAVQPAPAGRRIHYERRRPEETALYRLVQEHLETFLAQVELE
                     TGAGLPDFVREEFDAFLECGILAYGFLRLRCADCAHEKLVAFSCKKRGFCPACGARRM
                     AETAAHLVDHVIPRVPVRQWVLSFPIPLRFLFAAHPEPLTPVLQIIHRVISTFLIQQA
                     GLKRTEDDTSAVTLIQRFGSAANLNIHLHCLVLDGAYRTTEGVPVFHEVRAPTPGQLQ
                     TLLSRIIRRLMKFLTRKGYLIEEQGMTYLADTDPDTALAPLQAVACTYRNCARAPGGT
                     KSAEPANRPQPSGAAHRTTLCQ"
     gene            9418..10026
                     /locus_tag="VE844_13000"
     CDS             9418..10026
                     /locus_tag="VE844_13000"
                     /inference="COORDINATES: protein motif:HMM:NF016847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02228.1"
                     /translation="MRGHAEVRCAAHQRKKARHRDVACLARRGCKLEHLCRYITRPAV
                     ANERLTLNRAGQMVLTLKTPYRDGTTPIVMSPLEFMQRLAALVPRPRFHLIRFHGVLA
                     PNAKHRAEIIPSAPVNTTDNSADHGNAPPHSAPTRIRWARLLKRVFAIDMEHCPHCGG
                     PLTIIAAIVDPIVIAKILAHLGLPIRAPPRSPMRAFDRLQMT"
BASE COUNT         2270 a         2880 c         2790 g         2126 t
ORIGIN      
        1 agcggatcac agcgtcctca aaaccctctt ggcatacaac acctatttac ggagtggggg
       61 atactcaaaa tatacgccgg atgactttac cagtgatgtg aagaaattcg ggttgtttgt
      121 caaagacaag aaactcaaag agattaaatt agttgatatt cagcagtgga taggggagat
      181 aaaaaaggtc atgaaggaga aaactgtcag ccggaaaata tcagcgatcg ccaactactt
      241 taattggctt gcacaggaaa aagtacttac agaaaatccc gcacaatcaa tcacgtatct
      301 tcgggtgact tcgcccttac cggatatcct ttttgatgag gaatgtcaaa agctactcgc
      361 tgcagcgagc gccgatccac gaagttattt attggtgctt ctcttccttg aaactggtat
      421 aaaaaaagag gaattgtttg atttaaagct tgtccatttt gatttatcta ataaatatgc
      481 tccggaatta tggctgaagc atacaggaaa gaaggcaaaa aaggacagga aattaaagct
      541 gccgcatgag atagtatctg tctttcatga ctatgtgaag caatatggca ttgcagaagt
      601 tctctttccg tatacaccac ggtttattga gatgatcctg acagacacag ctaaaagagc
      661 agagctgcag aagaaagtaa cagctggtat tttgcgagac acctttgttg tccggtgttt
      721 gagaagagga gaggaaattg aaaatgtact ggtaaaaatt gggttgagtg cggcaacagg
      781 ggaggacgcg aaggagaagt atttgaaatt ggcagggaga gcgatatgat actcacttgt
      841 taaatctaaa ttcaagataa agaagcgcac gaggtgtatt caagagatcg ccgacgcaat
      901 ggcacagcaa gagaaagcgc gtggtgccaa cgaaatggca gcaaatatat aaaacgggaa
      961 ttaacaaggt tgacttagcc atttaccggt ctgctaaggc gctgctaaga aatggcgtaa
     1021 tcgctaagcc acatacgctt gttgatggag ccgctgtggc ataccatgca tagcattgta
     1081 aggcattatg aatgccaagt cttgacaagg catggaccgc acgcgcacgt cacactaggg
     1141 catgtttgca cgtcttgagt cggttacaca aaacagcact aaacaggagt gattgaatgt
     1201 ggttgcatgc tgccgggtgg ggattgcttt ctggcgccgg attgctggtc ggcgcggcga
     1261 tatcgtattt tattccatta tcgcaccggg tgatctcctc cgtaatgggg tttggcggcg
     1321 gtgtcctgct ttcagtgctt gcatttgaat tgatgaatga agctgctgaa cacggcagtc
     1381 tgatctcggc gatcgccagt tttctcgttg gcgcactggt gttttgcacg gtaaattggt
     1441 ttctgtcgca acacggcgcc aaaaatcgaa agcggtgcgg cggttgcgta caacagccaa
     1501 ctgaagcaga acagaaaggc agcggcgttg cgattgcagc cggcgcgctt cttgacagca
     1561 ttccagaatc aatcgtcatt ggcatgagcc tgattagtgg cggaagcgtc ggcatccctg
     1621 cggtggtcgg cttctttttg gcaaatgtgc ccgaagggct ttccagcgca tccggcatga
     1681 agcaggcagg ccgctccttt gtctacattt ttggggtctg gaccagtatc gtcttgctaa
     1741 gcggcgttgg cgctgttgtt ggctataccg tttttggcca atttccgccc gaagcggccg
     1801 ccctcgtcat ggcgtttgcc ggaggcgcaa ttctggcaat ggtggctgag accatgattc
     1861 ctgaagcgtt tgaaggtgcg cccagcttta tagggcttat tgccacgatc gggtttttat
     1921 gcgcttttgc acttcataaa atgagcgatt aaggtgttac ctcacgccct tctctattga
     1981 taaaagatga aatttatggc cttgccttac gtcccggtga gctgcgatct atacgagaag
     2041 ctcgaagagt atgccgttcg tagacgacaa tgcgacattc tctaccgcga tgacgttggc
     2101 caaacgttaa caatacgtga ccggattgtg tccctgtcgg tacaagacaa ggtggaatac
     2161 gtgcgtttgg aggggggcag cagcatccgt ctggacgcgc tcatcgaact ggacggtatg
     2221 tcattacctg ccaatgctta tcatcagcag gatatttcag gagcaatcga acgtgaatag
     2281 cgaaaatctg gaaacaatca cgctaggcgc cggctgtttc tggtgcgtgg aagctgtctt
     2341 taatgaactc caaggcgtca ggaaagtcgt gtcaggatac gctggcgggc atttgcccaa
     2401 ccccacttat cgcgaggtgt gcgacaagag caccggccat gccgaagtcg tgcagatcaa
     2461 gttcgatccg cagcaaatct cgctacggga attgctcgac gtcttcttca ccacccacga
     2521 cccgacgaca cgcaaccagc agggcgctga cgtcggttcg caatatcgct caatcattct
     2581 gtaccagtcg ccgcaacaaa agcagattgc tgaggaggtg actgctgact tcaatgcaag
     2641 gaaaatttgg gcggcgccaa tcgtgactga aatcaaaccg ctggaagcat tctatccggc
     2701 agagcctgag catctgcagt attaccagcg caacccagac aaggcctatt gccggattgt
     2761 gattgagccg aaggtggcca agctccggaa tcagcatatg gaaaaactca ggaagtaaag
     2821 aagtcaagtg acgctttata tcctcaatta attaagcctt gaaatgacac caatccttgc
     2881 acggcgccat tccggcgtgc tgcctgcatt agatggtgcc gaaataaatt aaccttttgg
     2941 agagatgaaa atggttgata aactgcattt gagtgaagaa gaatggaagc gacggcttac
     3001 acctgaagag taccgtgtat tgcggcaaca tggcacggaa cgagtgggca gtgggtgctt
     3061 tctaaagaca aaggacccag gtacctacgt ctgtgcagcg tgcggcaatc cgcttttcaa
     3121 gtccggagag aaatttgaat cgggcacggg ctggccatcc tttaccagcc cggtcacgca
     3181 ggaagcggta agcgagtacg acgatagttc atatgggatg cgtcgcacgg aagtgcggtg
     3241 tggccgctgt gatggccatc taggacacgt ctttcccgat ggacctgctc ctacaggact
     3301 gcgctattgc atcaattccg tttcagtcaa gcacgtggcg gagggggagc caataccttt
     3361 agtaaccagc tagttagcct gatccagcaa agtaagccgg aaaatcatta ggtagctacc
     3421 tgtaatggcc cgcaataaga atcgtctggg accgcaatca agctaatttt cggcccacat
     3481 tatctgcaac tgagaccaga ttaactgcaa ctagaccaca atcaagagaa cggacccaca
     3541 ttaattgcaa ctgagtcaag gatctctgca tcacatgctc tcacacggct ggcaagcctg
     3601 agtctagcct tactggtgcc cccgttatgc agtatgaaca tccctcaaga aaacaaaatc
     3661 tttttgaata tcccttccta cgataaaatt gtatactccc accttttgaa atccccagcg
     3721 ctcatagaag cgaatggctc tcccgttgtt ttcccacacc gtaagccaaa tgctcccaaa
     3781 gcccgaatgc cttacatgtt caagacatcg agccatgagt acatcaccca atctacgcct
     3841 tgtccactcc tctagaatat aaagcctctt aagttggatc gaatggggag gcactaaccg
     3901 attcggcgcc tgaccaggat acagaagagc atatccaatc gttcgtccgc tcttctcaag
     3961 gatcagagcc gccgcctgag actgcactgc aaaacctcat cgcccctaaa gcgggcgatg
     4021 aggccgctca ggccaatgga ggcgcccatt accatgggca tcaatcacaa acctgcgccc
     4081 gaactgcttg tgccctactg gatcgacggg ttgggcagtt ggtgggagag cgcgctttac
     4141 tccgaggcgg aacgcgcggc gctcgcctat tgcggcgcgc tcacagaggg caaccggctc
     4201 aatataacct ttgaccttgc ccccagcaat gaccccggtc tgagctagag tccgtcgctg
     4261 aaggagacgg acgatgcgca agagcaggtt cagcgaggag cagatcatcg gcgtgctgaa
     4321 ggagcaccag gcggggctgc cggtgggcga gatctgccgg cggcacggga tcagcgacgc
     4381 caccttctac acttggcgct cgaagtacgg cgggcttgag gtctcggagg ccaagcgctc
     4441 gaggaggaga accgcaagct caagaagctg ctcgcggaac agatgctaga tgcagcgacg
     4501 ctgcgcgaga tgcttgcaaa aaacttctga cgccccgctg atctggagat gtgctgcggc
     4561 cttggttaag ttgagccacg gctcagggcc ttcctcgccg gcacgataga ccgggatctt
     4621 gtgatgccag cgcagcgccg tcacccgttc tcgggtccag cgattgccat gatccgtggt
     4681 cagcttgttc cgattgagga tgccggcgat cagttcgtcg ttggcgatga ggacaagctg
     4741 ccggactgcc gcaatgatgt cctgtgacgt gctgttacgc tgcccgggcc gacgtctcgg
     4801 gaggcgcagc tccgtgtgaa cgccacccat ccagtggatg aacagaatga tctcgccggc
     4861 ctcggcgtcg atgtcggcga ccacctcgtt gatcatggcg cggacgagta ggcgattcca
     4921 ttgcgtttgg ataagtaggt cggagaatac gggtggctcc gtccgcctca tttttacgct
     4981 cagtgtgagt gttttggttg ctcatttaag gcctaccctc taacggaact actctcgtac
     5041 gtgaagctag cgcgcatgcg cggcgcagat ctggttacgg aaccgccgcg cgaggaccag
     5101 gatgatcgcc atgttgacca tgttcacgag ctgtgtaacc atgaacacgg catccccaat
     5161 gatgatcgaa tgaccgagaa agagcgctga cgccaagacc catagcgcgt aggcgcgctc
     5221 gctgattccg gcggagcaat gctcagtcca gaggtgccag atctgagggg cgtaggcgcc
     5281 gatgacaagc ccagtcccaa tatagccgat gacggacagc aagttttcca taccttcgca
     5341 ctcgttgctg gattagctaa tgaagcgttc ctcgcgtcgc ccggaagcat aggcgggatc
     5401 agccgtacga caaccatcgc ccggaaccgc gccttcggca ctgaccaagg ccatcgaaat
     5461 gtggctcact gtcgggtggc aatcgcgcgt cgcctcgggc ggcgggcgcg tggtggcccg
     5521 acaacacagc gaaggccctg gtcgagttct gtgaaggcga ttgcgtgcag ctcgttcacc
     5581 cttcgaactc ggtcagaaat cgcatgcaca agcttgggga gaaagttcaa tgacaacaac
     5641 cagctccatt cctggttacc ggcttggcga gccccacacc aaggcaatct gccgtcgtac
     5701 ccgcgagcgg ctctcggttt acgtgccagg ctccagctcg agaacgatct tgccggggct
     5761 ggcaggcctg atgccgtcga gcatctcgtg ggccgaccgg gcgtcggcga ggggtaggac
     5821 cgttccgacg ttcggccgga tctgcccggc ttcgaagcga gcggtcagct cgtccaagta
     5881 gcgcgtctcg acatgcacga gcatgaagct tgccttcacg ccccgcgacg ccgcttcttc
     5941 ggcggtggga ggcgggggga ccgccgtgac cagcacgccg cccggcttga cacagacgag
     6001 cagctgcgaa cgggacggtc ctccgaccag atcgatggcg gcgtcgaccg ttccctcgta
     6061 ccggccgagc tcggatgacg gcgtgacctc gttagcacca agttcgcgaa gctggtccag
     6121 gtctttttgg agcgcagagg cgatgacgtg gatgccggca gtgcgtgcga gcatgacagc
     6181 ataccgtccg acgctcccgg ctgcgccttg gatgatggcg acctgccccg ctttcaattt
     6241 tgcttcgtcg aacagcatct gccaggcggt gaccgcgacg accggagccg atgcggcttc
     6301 gacaaaggac aaggtgcgag gtttcttggc gatcatgccg gccttgcatg cggcgtactc
     6361 ggcataggcg ccggtgaact gggcattcgt gacgccaaag acagcctcgc cagggcggaa
     6421 attggagata cccggaccaa cctcctcaat aacacctgcg aggtcggatc cgagcactaa
     6481 aggcaacggc tgcggcagca cgctcttccc ggcccgcacc cacgcatccc acgggccgac
     6541 gcccgctgcc ttgacgcgga ccaacacctg tcccgctccc ggcacaggtc gggacacctc
     6601 ctcatagacg attgcctcaa gcccgccgaa ttggtgcacg cgcaccgcgt gcatccgtcg
     6661 tgtcagtgca cgcgcatgtg ccgcaggatc ttccttcatg gcttcacctc ctcagcaatg
     6721 gattgggtcg agttcctgac accgttactt gtcaacagtg gtcagttgcg cccccgtcgg
     6781 agcaataaac accgcaagat gacgcgccgg catcgtctgg ctgggattct ccgtgcgggt
     6841 gtgcactgtc ccgggcggct caacccagct ttgtccggcg ctatactcga tcacgtcgcc
     6901 gccgttgagt tgtgaacgca cggtcccctc aagcacatag gcgaagacga tgtcagcatg
     6961 gcggtggctg gccgctttgg ctccgggtgc gagcgctacc acgatcgctg tcaggctgcg
     7021 tccgggatcg tgtgggagtt cctgcgaggt aacgggcgtg tggtccacac cgctcgattg
     7081 tgcaccggct accgacccgc agctcaagag accgacgacg agcagtacgg tggccgtgta
     7141 cgcagaagac ctgatggcct tgcactccat gatatcctcc ctttctcttg cgtattgcac
     7201 ctcccttttt tcgggtgcaa aaaattgccc attcagctat ctcaagctct aggggccccc
     7261 aattgcaccg tgaggagcgc atcctgtccc gccaggtgtc gaacccgtca ctttaccggg
     7321 ataagaatcg gagccccttt gtccttcaca aagaacacca ggaactttgc cggctcggtg
     7381 ctgctggcat tccggctaac cagatgcaca tcgtctggcc cttcataaaa ggtctgccct
     7441 ggcccgagcg tcggttgctc ccctccttgc acctgcatga cgaccctgcc ctccagcacg
     7501 tagacaaaca cgtgggcatt gtgccggtgg ataacatccg atgcgcctcg gtcatactgc
     7561 accgtaatca tggtagcttc tttcccagga attcctgtca gctccttcga tatcagcggc
     7621 gttaccgtcg tttcttgcgc caccgccgtg cccgttatca ggcacaacac aatcagcatc
     7681 tgtttcattt ttgcttcctt cttttcacac ctgctattgt cgctaccaca gtgattgcac
     7741 tatctcccca tttacttcga tctggcgact gtatcacatt aacaaaaaac cccttcccag
     7801 attgtcgata ctacacctta agtatagtcc cttatctaga ttcgccacaa atgaccgcaa
     7861 aaacccgcct actcgaccaa gtcaggaagc ctgcccgacc tacgccatcc agcttacccc
     7921 ggactttgag atgagcgagt atgagcgcaa gaacatggtc tatgagaaag aagacctcct
     7981 gatcgatggc cccggcaagt acccgggtta caacttctat cgggtcgcgg ggctggccat
     8041 cgccgggaag gccaaggggg aggcggagca cgaagcgccg cctgtcgatg tgaaaagtct
     8101 gttgccgtga aacgcgacga gatcatccgc attctgaggg agcaccgcca ggagctggaa
     8161 gaacgctatg gcgtcgcttc gctgaggctt tttggctcgg tggcgcgcga tgagacgact
     8221 agcggtataa gcgcagcgat aaaataatgt tggtccatca ccgcccagcc gccggtgata
     8281 ttgcggtcaa gctgatgtac cggctgcatt gcagtgggtt ccctcctcgg catcgccaaa
     8341 cgcgacccaa ccggatacgc cgcctcatcc agcacgctta tgctactcat ggggctaagc
     8401 acgggaagtc tggcgatgcc agcgccccag tggcgtgctg ttgccagacg cggccaccgc
     8461 atgctactgt caacaccgac agctttcgag gaagagcaac ccctcagggg cgatggacac
     8521 agcggttcag cctgcgccgg caggaaggcg catacactac gagcggcggc gtcccgaaga
     8581 gaccgccctc taccggctgg tacaagaaca tctcgagacc ttcttggccc aagtcgagct
     8641 tgagactggg gcgggcttgc ccgatttcgt cagagaggag ttcgatgcct ttctcgaatg
     8701 cggtatttta gcctacggtt ttctacgcct gcgttgcgcc gactgcgccc atgagaagct
     8761 tgtcgccttc tcgtgtaaga agcgtggctt ttgtcccgcc tgcggtgccc ggcgcatggc
     8821 ggagacggcc gctcacctgg tcgatcacgt catcccccgg gtgccggtgc ggcagtgggt
     8881 gctctcgttt ccgatcccgc ttcgctttct gttcgctgcc catcccgagc ccctcacccc
     8941 ggtcttgcag atcatccacc gggtcatctc cacatttctg atccaacaag cgggactcaa
     9001 acgcaccgag gacgacacca gcgccgtcac gcttatccag cgtttcggct cggccgccaa
     9061 tttgaacatc catctgcatt gccttgtgct cgatggggcc tatcgcacca ccgagggcgt
     9121 accggtgttc catgaggtgc gcgcccccac ccccgggcag ctgcagaccc tactcagccg
     9181 gatcataaga cgcctcatga agttcttgac acgcaaaggc tatctcattg aagagcaggg
     9241 gatgacgtat ctagctgaca ccgatccgga taccgcgctc gcacccctgc aagcggtggc
     9301 ctgcacctac cgcaattgcg ctcgggcccc gggcgggaca aaaagtgctg agcctgcaaa
     9361 ccgtccccag ccaagcggcg ccgcccacag aacaacgctg tgtcaatgag aagggctttg
     9421 agggggcacg ccgaagtgcg ctgcgccgcc catcagagga agaaagccag gcacagggac
     9481 gtcgcctgtt tggcgcgccg aggatgcaaa ctcgaacacc tgtgccgcta tatcacccgc
     9541 cccgccgtgg ccaacgaacg gcttacactc aatcgtgccg ggcagatggt gctcacactg
     9601 aagaccccct atcgagatgg cacgacccct atcgtgatgt cacccctgga gttcatgcag
     9661 cgactcgccg cgctggttcc ccgtccgcgg ttccatctga tccgcttcca tggtgtgctc
     9721 gcgcccaacg ccaagcaccg tgccgagatc attccgagcg cgccggtcaa cacaactgac
     9781 aactcagcag accacggtaa cgcgccccct cactcggcgc cgacccgcat ccgctgggct
     9841 cggttgctca aacgggtgtt cgctatcgac atggaacact gcccacattg tggcggcccc
     9901 ttgacgatca tcgccgccat cgtagatccc atcgtgatcg ccaagatcct cgcgcatctc
     9961 ggcctgccca tcagagcacc gccccgctca ccgatgcggg cattcgatcg actccaaatg
    10021 acctgatccc cacccgatcc ccgattcaac ccggttcagc ccccga
//
LOCUS       DASQSL010001260         1718 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_187685, whole genome shotgun sequence.
ACCESSION   DASQSL010001260 DASQSL010000000
VERSION     DASQSL010001260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187685"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..330
                     /locus_tag="VE844_13005"
     CDS             <1..330
                     /locus_tag="VE844_13005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014086595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug ABC transporter ATP-binding protein"
                     /protein_id="HZC02229.1"
                     /translation="IADRIGVISNGEIIVVEDKAELMRNLGKKQLRLQLQSKLDRIPG
                     ELTGYGLELTPDGSELIYTYNTQTERTGITALLADLNRAGIKYNDLQTKQSSLEDIFV
                     SLVKERR"
     gene            327..1088
                     /locus_tag="VE844_13010"
     CDS             327..1088
                     /locus_tag="VE844_13010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC02230.1"
                     /translation="MNFRAIHAIYKFEMARFWRTLLQSLVSPVISTSLYFVVFGAAIG
                     SGITDIDGVSYGAFIVPGLIMLSLLTQSISNGSFGIFFPKFMGTIYELLSAPVSSIEI
                     VIGYVGAAATKSIVLGLIILATASLFVPLEIAHPLWMITFLVLTAVTFSLFGFILGIW
                     ADGFEKLQLVPLLIVTPLVFLGGSFYSIDMLPPFWQTVSLFNPVVYLISGFRWSFYGI
                     ADVSVGVSLGMTGLFLAICLVTVWWIFKTGYRLKT"
     gene            1176..1556
                     /locus_tag="VE844_13015"
     CDS             1176..1556
                     /locus_tag="VE844_13015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014358859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZC02231.1"
                     /translation="MVQQQSVSVETLKAITNAFNAHDLDAIMEFFADDCSLDMPRGPE
                     PWGKRFIGKAAVREGLATRFKGLPDVHYSDARHWVSGNMGVSEWTLTGTMADGVRVEV
                     RGCDHWEFRDGKVIRKDSYWKIVE"
BASE COUNT          364 a          455 c          492 g          407 t
ORIGIN      
        1 atagccgacc ggatcggggt gatcagcaat ggcgagatca tcgtggtcga agacaaagcc
       61 gaactcatgc gcaacctcgg caagaagcaa ttgaggctac agctgcaaag caagctcgac
      121 aggatcccag gcgaactcac tggctatgga ctggagctta cgccggatgg tagcgagttg
      181 atctacacgt acaacacgca aaccgagcgc acgggcatca ccgctttgct cgcagacctc
      241 aacagagcgg gcatcaaata caacgatctc cagacgaaac aaagctcgct ggaagacatt
      301 ttcgtcagtt tggtgaagga gagacggtga acttccgcgc aatccacgcc atttacaagt
      361 tcgagatggc aagattctgg cgtacattgc tgcaaagcct tgtctcacct gttatctcga
      421 cgtccttata ttttgtcgtc ttcggcgcgg cgatcggctc aggcatcacc gatatcgatg
      481 gggtcagcta tggcgccttc atcgtgcccg gactgatcat gctgtcgctg ctgacgcaga
      541 gcatctccaa tggatcgttc ggcattttct tccccaagtt catgggtacg atatacgagc
      601 tcctgtcggc tcccgtttcc tctatcgaga tcgtcatcgg ctatgtcgga gcggccgcga
      661 ccaagtcgat cgtcctgggc ctgatcatcc tggccacggc gagcctgttc gtgccgctcg
      721 agatagcgca cccgttgtgg atgatcacgt tcctcgtgct cacagctgtg accttcagcc
      781 tcttcggctt tattctcggc atctgggctg acggtttcga gaagctgcaa ctcgtgccgc
      841 ttcttatcgt cacgcccttg gtcttccttg gcggtagttt ttactccatc gatatgttgc
      901 cgccgttctg gcagacggtc tctcttttca atcccgtcgt ctatctgatc agcggcttcc
      961 gctggagttt ctatgggatc gccgatgtaa gtgtcggcgt gagcctgggc atgactggcc
     1021 tcttcctggc catatgcctg gtgacggtgt ggtggatctt caaaacaggg taccgactca
     1081 aaacgtagcc cgcgccgggc agggcaccgg ggagctatac tgagtgcgtc tgtaccaata
     1141 acaagttaga gcttcacgga ggaggaggaa gcggcatggt tcaacagcaa tcggtctctg
     1201 tcgaaacctt gaaggcaatc accaatgcat tcaatgccca cgatctggac gccatcatgg
     1261 agttctttgc agacgattgt tcgttagata tgccccgtgg gccggagccc tggggaaagc
     1321 gctttatcgg caaagcggcc gtgcgagagg ggttagcgac acgcttcaag ggcttaccag
     1381 atgtccatta cagtgatgcc cgacactggg tcagtggcaa tatgggcgtg tctgagtgga
     1441 cgctgacggg cacgatggcc gatggagtcc gagttgaagt acgtggatgc gaccactggg
     1501 agtttcgcga cgggaaggtg attcggaagg attcgtattg gaagatcgtt gagtagccag
     1561 catgaggccc gcgctctaac gcttggggtg gagcctgttt ggtaagtaac agggttggac
     1621 tcggaggagt ttttcaacat gctaggttgg tttcgagacg aaccttagag ccaacccgcc
     1681 tccctacaag cgtaatctct ctggcttaat ctacttat
//
LOCUS       DASQSL010001261         1395 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_169556, whole genome shotgun sequence.
ACCESSION   DASQSL010001261 DASQSL010000000
VERSION     DASQSL010001261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1395
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169556"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            516..>1395
                     /locus_tag="VE844_13020"
     CDS             516..>1395
                     /locus_tag="VE844_13020"
                     /inference="COORDINATES: protein motif:HMM:NF033550.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3 family transposase"
                     /protein_id="HZC02232.1"
                     /translation="MRNSSYSKVNGTLQDVSQKHGVTYDSVRGVLKRYVKGEVDWSQS
                     KALGLLGVDEISLLKGHADFVTLVSAHDEQGKPIVLAVLKGREKQTLIDFLKTIPKRL
                     QDPIKEVCTDLYEGFIHAVEEVLPQAKIVADRFHIAKLYRAAVDALRKTELKALTGVL
                     TKDEYARLKGVLWALRKRHEHLEPEEQALLDRVFEASPLLRKAYNLREKLTRIFDKDH
                     SKKSGRRAIRRWMAAVRKSGLDCFDKFLTTLENRMDLITHYFISRSSSGWVEGLNNKI
                     QVLKRRSYGIKNLGTLF"
BASE COUNT          341 a          385 c          396 g          273 t
ORIGIN      
        1 gaatcgcagc cgatcggcga gggattgctc gaataggccc gccaattgtt caagttgtgg
       61 catcgtgtcc gcgagggacg ttgacacggg cggcatttgc ggtgaccgtc gtcgagattc
      121 gcgcagggtc tttgggaatc gctgtgggat accccaatat attggggtca ttgaatcaaa
      181 atcatcccaa ggagcacccc cgtgacgata ccaattgagc aactgttgaa caaccccgga
      241 attcgcgtgt tgagcgtcaa gtatgacgaa gataaaaacg agtgtcagat cgaatcaact
      301 cagggctgtt cgatgtgcca caagtgtggc cagaaagcca cggaatttca cgaacgcggg
      361 caggaactgg aactgggtca tctgccgctg tgtggtcggc aagtgatgct ccggttgcgt
      421 cccaagcgct atcgttgtcc atatttgcga gggtgccgtg accaccaccg agcgagcgga
      481 ttggtacgat gccaaagccg gttgtaccaa aacctatgcg gaattcctcc tactcgaagg
      541 tcaacggcac ccttcaagac gtctcgcaaa agcacggtgt aacctacgat agtgtgcgcg
      601 gcgtgctcaa acgctacgtc aagggcgaag tcgattggag tcaaagcaag gccctagggc
      661 tcctgggagt ggatgaaatc tcgctgctca aagggcatgc cgattttgtc acgctggtca
      721 gcgcgcacga tgagcagggc aaacccatcg tgttggcggt actcaaaggg cgggagaagc
      781 agacgctgat cgatttcctc aagaccatcc ccaagcggtt gcaagacccg atcaaagaag
      841 tgtgcaccga cctctatgag ggcttcatcc acgccgtgga agaggtgctg ccccaggcta
      901 agattgtcgc ggatcgcttc cacattgcca aactctatcg cgctgccgtt gacgcattgc
      961 gcaagaccga gctgaaagcg ctcacaggcg tcctcaccaa agacgaatac gcccggctga
     1021 aaggtgtgct gtgggccttg cgaaagcggc acgagcacct ggagccggaa gagcaagcgc
     1081 tactcgatcg ggtgtttgag gcttccccct tgctgcgcaa ggcgtataac ctgcgcgaaa
     1141 aactgacccg aatctttgac aaagaccatt ccaagaaatc cggccgccgc gcgatccgcc
     1201 gctggatggc cgcggtcaga aaaagcggcc tagactgttt cgacaaattc cttaccacct
     1261 tggaaaaccg gatggacctc atcacccact acttcatcag ccgttcatcg agcggctggg
     1321 tcgaaggact gaacaacaaa atccaggtgc tcaaacgccg ttcttacggg atcaaaaatc
     1381 tgggcaccct cttcc
//
LOCUS       DASQSL010001262         1616 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_104109, whole genome shotgun sequence.
ACCESSION   DASQSL010001262 DASQSL010000000
VERSION     DASQSL010001262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104109"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(90..1094)
                     /locus_tag="VE844_13025"
     CDS             complement(90..1094)
                     /locus_tag="VE844_13025"
                     /inference="COORDINATES: protein motif:HMM:NF033547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HZC02233.1"
                     /translation="MPTLSHVHQLFSVETCHAYIHALRWKDRPLQCPHCHSPEVGPWG
                     TYHYRPGFKRYRCKDCGRTFNDLTKTLFAQSPRSVPHWMVATFLLCLSCSSRRIAREL
                     GVHIRTSYRWCWWLRNAALSYEMDRQGEGTVEADELYHTAGSKGQAKHGGTKPLGRRP
                     RRRRKKREPGRGHYDKDRPAIIAWVSRQGPVVVQAVKDFTVSTVQRAADAAVQTGSRL
                     YTDSASSYRALKGYVHEFVNHTQREYARGEVHENRAECLFSLLKPYLRGFRGISKSNL
                     PGYVGFFQFLRNARYQNAFEQAEMILQAALDPSVASKARKGDFVTGLDHFALLQTPIN
                     "
     gene            complement(1364..>1616)
                     /locus_tag="VE844_13030"
     CDS             complement(1364..>1616)
                     /locus_tag="VE844_13030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012168342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02234.1"
                     /translation="PKTVRKHLAILGLFIDFVCWDTDVRRIEEITRGIANSAFRQWYL
                     RKVGDRTESELKTAIKKFFQFLAQEKGITNEAVLKSFQR"
BASE COUNT          333 a          455 c          464 g          364 t
ORIGIN      
        1 tccttcatta aataaaggct ttggcgtcaa acgctcctgc agcgtggcat tgttcatggc
       61 ttttgaaacg gtagtgatat ccatgtcgct caatttatcg gggtttgtag cagggcaaag
      121 tggtccaagc ctgtgacaaa atctcccttg cgggctttgc tggcaacaga tgggtctaag
      181 gccgcctgca agatcatctc agcctgttcg aacgcattct ggtaccgagc gttccgcagg
      241 aattgaaaga acccgacgta tcccggtagg ttcgatttgc tgataccacg aaacccccgc
      301 aggtagggct tgagcaatga gaacaggcat tctgcccgat tctcatggac ctccccgcgc
      361 gcgtattccc gttgtgtatg attgacgaac tcgtgcacgt atcccttcaa cgctcgatag
      421 ctgctggccg agtcggtata cagtcgactg cctgtttgga ccgcggcatc agccgccctc
      481 tgcaccgtgc tgacggtaaa atccttcaca gcctgcacca cgacgggccc ctggcggctg
      541 acccacgcga tgatcgccgg tcggtctttg tcataatggc cgcgaccggg ctcgcgcttc
      601 ttgcggcggc gacgcggacg gcgtcccaag ggctttgtcc caccgtgttt ggcttggccc
      661 ttgctgccag cggtgtgata gagttcatcc gcctcaacgg tcccctctcc ttggcgatcc
      721 atttcatagg acagggcggc attgcgtagc caccagcacc agcgatagct agtacggata
      781 tggaccccca actcccgcgc gatgcgacga gatgaacatg agaggcacaa cagaaaggtc
      841 gccaccatcc agtgcgggac ggaccgtggg ctctgggcga acagcgtctt ggtcaggtcg
      901 ttgaacgtcc gcccacagtc tttgcagcgg tagcgtttga atcccggtcg gtaatggtag
      961 gtaccccagg gaccgacctc tggactgtgg caatgaggac actgcaacgg gcgatctttc
     1021 caccgtaaag catggatata ggcgtggcag gtttcgacac tgaagagttg gtgtacatgc
     1081 gacaaagtcg gcatcgctga gaatctcctg tggtcacgaa agcggttcgg caatagaagg
     1141 ggagattctc agctctgtat caagttttta cgctgctaca aaccccgata aattgagcgt
     1201 tgcccattat caccggtgga ggacgcatct gtcgctggcg atggattgtc cggagcctcg
     1261 cccagcccat gctccgggcg gaggcagagt ggttgcggtg cccgaggtgg ggggcttgca
     1321 ccaccattac gagcgacgga tagcgtgagc acgccaggga tagctagcgc tgaaaacttt
     1381 tcaggacggc ttcgttcgtg atgccttttt cctgtgcgag aaactggaaa aacttcttga
     1441 tcgccgtctt cagctcactt tcggttcgat cgcccacttt ccgcaaatac cactggcgga
     1501 acgcactgtt cgcaatcccc cgtgtgatct cttcgatgcg gcggacatcg gtatcccagc
     1561 acacgaaatc gatgaagagt ccaaggatgg ccagatgttt gcgcaccgtt tttggg
//
LOCUS       DASQSL010001263         1350 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_34077, whole genome shotgun sequence.
ACCESSION   DASQSL010001263 DASQSL010000000
VERSION     DASQSL010001263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1350)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1350)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1350
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34077"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1350)
                     /gene="glgX"
                     /locus_tag="VE844_13035"
     CDS             complement(<1..>1350)
                     /gene="glgX"
                     /locus_tag="VE844_13035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006788783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004133 - glycogen debranching enzyme
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HZC02235.1"
                     /translation="VGTATPEGTYRALAERLPDLRDVGITAVELMPVHSFVDDRSLVQ
                     KGLRNYWGYNSIGFFAPDGRYLASGQVNEFKTMVKTLHSAGIEVILDVVYNHTAEGNH
                     LGPTLCFRGIDNAAYYRLDPEQPRYYVDYTGCGNTLNMMHPRVLQLIMDSLRYWVLEM
                     HADGFRFDLASALARELHEVDRLGAFFDIIQQDPVLSQVKLIAEPWDLGEGGYQVGNF
                     PAGWTEWNGKYRDAVRAYWKGEEGHIGELAYRLTGSSDLYERSGRRPYASINFITCHD
                     GFTLEDLVSYNDKHNEANLEDNRDGETYNRSWNCGVEGPTAEPEILALRARQKRNFLA
                     TLLLSQGVPMLLAGDEIGHTQQGNNNAYCQDNNLSWIDWNLRLEDRELYAFVERMIQI
                     RKQHPIFRRRNFFQGRQIRGAGIKDILWLKPDGLEMSDAEWNTSFARCLGVCLLGDAL
                     "
BASE COUNT          275 a          410 c          385 g          280 t
ORIGIN      
        1 cagggcatcc ccgagcaggc agacaccaag gcatcgggca aaggaggtat tccactccgc
       61 atcgctcatc tccaagccat caggcttgag ccagaggatg tctttgatgc cggcgccccg
      121 gatctgacgt ccttggaaga agttgcggcg gcgaaagatc gggtgctgct tgcggatctg
      181 gatcatgcgc tccacgaagg cgtacagttc gcggtcctcg agcctcaggt tccaatctat
      241 ccaactgagg ttattgtcct ggcaataggc gttgttgtta ccctgttgcg tatgccctat
      301 ctcatcaccg gcgagcaaca tgggcacacc ttgggacagc agcaaggtag ccaggaaatt
      361 gcgcttctgg cgggcgcgca gggccaggat ctccggctcg gctgttggcc cctccacacc
      421 acagttccag ctccgattat aggtttcgcc atcgcggtta tcctcgaggt tggcctcatt
      481 gtgcttgtcg ttgtaactca ccagatcctc caaggtaaag ccatcgtggc aggtaataaa
      541 gttgatgctg gcatagggcc ggcggccgct gcgttcgtag aggtcgctcg agccggtaag
      601 gcgataggca agctcgccga tgtgtccctc ttctcccttc cagtaggcgc gcacggcatc
      661 gcggtacttc ccattccatt cggtccagcc cgcgggaaag ttgcccacct gatagccacc
      721 ttctccgaga tcccaaggct cggcgatgag cttgacctga gatagcaccg gatcctgttg
      781 aatgatgtca aaaaacgcgc ccagccgatc cacctcgtgg agctcgcgcg cgagagccga
      841 ggccagatcg aaacgaaagc catccgcgtg catctccagc acccagtagc gcagactatc
      901 catgatgagc tgaagcaccc ggggatgcat catattgagg gtattgccgc aacccgtgta
      961 gtcgacataa tagcgcggct gttctggatc caggcggtaa taggcggcgt tgtcgatccc
     1021 ccggaaacag agcgtcggcc cgaggtgatt gccctcggcc gtgtgattat acactacgtc
     1081 caggatgacc tcgataccgg ctgaatgcag tgtcttgacc atggtcttga actcgttcac
     1141 ttgaccgctc gcaagatacc gcccatccgg tgcgaagaaa ccgatggagt tataccccca
     1201 atagttgcgc agtccctttt gtaccaggct ccggtcatcg acgaaactat gcactggcat
     1261 gagctcgacc gcggtgatgc cgacatcccg taggtccggc agacgttcgg cgagcgcccg
     1321 atacgtcccc tccggcgtcg ccgtgccgac
//
LOCUS       DASQSL010001264         1221 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_104115, whole genome shotgun sequence.
ACCESSION   DASQSL010001264 DASQSL010000000
VERSION     DASQSL010001264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1221
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104115"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            88..693
                     /locus_tag="VE844_13040"
     CDS             88..693
                     /locus_tag="VE844_13040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02236.1"
                     /translation="MANFKQQFFLQFASLGLTELISEYRTRYEPKKGDRFNVDGITYE
                     IGPAKITSAGVEFEVSSKIPQEELSSKADMVRYFEAVKGLMLRASSAPSSIDMENIVR
                     EISEEETKERDYVKLRYCIAEQTLFDDHRVNEELKRLQENPAMDQPPAITGVNTLAGR
                     VVLSLLKRNMQQQAKTIMDNLIKANEETRQQLRTTVVGAPS"
     gene            723..920
                     /gene="yacG"
                     /locus_tag="VE844_13045"
     CDS             723..920
                     /gene="yacG"
                     /locus_tag="VE844_13045"
                     /inference="COORDINATES: protein motif:HMM:NF015821.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HZC02237.1"
                     /translation="MCGRQTTWRENPHRPFCSARCRLADLDGWLTGRYSVAGESDESA
                     TPPSLPDFPEDSTTSSPGEKT"
     gene            945..>1221
                     /locus_tag="VE844_13050"
     CDS             945..>1221
                     /locus_tag="VE844_13050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02238.1"
                     /translation="MPDRDTAPPVKPAVVLWVSLAGQPLLCTDAREGDTLARDLWSIP
                     EAPGISLSIVVFGSALSCQGRSGRMEKARTLGELAKQGYKVLSVKEEM"
BASE COUNT          291 a          323 c          362 g          245 t
ORIGIN      
        1 gttgcaagga cgtcggccac cgaatctggt taatcccgaa gtcctcggat aaggccaagg
       61 accgccgctg gaggaatatc gcacgctatg gctaatttta agcaacaatt cttcctgcag
      121 tttgcctcgc tggggttgac ggaactcatc tctgagtacc gtacccgtta tgaaccgaag
      181 aaaggcgatc gctttaacgt cgacggtatt acctacgaaa tcgggcctgc taagatcacc
      241 tctgcagggg tggagttcga ggtgagctcc aagattccgc aagaggaact gtctagcaag
      301 gcagatatgg tacgctactt cgaggcggta aagggtttga tgttgcgggc cagcagcgcg
      361 ccgtcgtcga tcgacatgga aaatatcgtg cgcgagatca gtgaggagga gacgaaggag
      421 cgcgattacg tgaagctacg ttattgcatt gcggagcaaa cgctcttcga cgatcaccgg
      481 gtgaatgagg aactcaagcg gctccaggaa aaccctgcca tggaccaacc gccagcgatt
      541 accggggtga atacattggc cggccgcgtg gtgctcagcc tattgaagcg caacatgcag
      601 caacaagcca aaaccatcat ggacaatctc ataaaggcca atgaagaaac gcgtcaacaa
      661 ctgcgcacga ctgttgtggg agctccttca tgatgcaggt tgaaggccct gtacgctgcc
      721 cgatgtgcgg acggcagaca acttggaggg agaatcctca ccgaccattc tgctcggcgc
      781 ggtgtcgtct ggctgatctc gatggatggc tcaccggtcg ctacagcgtg gccggtgagt
      841 ctgatgagtc tgccactccc ccttccctcc ctgatttccc cgaagattcc acgacgtctt
      901 cccctgggga aaagacttga cgagctgtag cgggattgcg tacagtgccc gacagagata
      961 cggcaccccc tgtcaagcca gcggttgtgc tgtgggtatc cctggcaggc caaccactgc
     1021 tatgcaccga cgctcgggaa ggggacacgc tcgcgcgcga tctctggagc attcccgaag
     1081 cacccggaat cagcctgtct attgtggtgt tcggatcagc tctcagttgt caaggtagga
     1141 gtggacgtat ggagaaggca agaacgctgg gcgagttagc aaagcaaggc tacaaagtcc
     1201 tgtccgtgaa agaggagatg c
//
LOCUS       DASQSL010001265         1769 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_187698, whole genome shotgun sequence.
ACCESSION   DASQSL010001265 DASQSL010000000
VERSION     DASQSL010001265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1769
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187698"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            217..1404
                     /locus_tag="VE844_13055"
     CDS             217..1404
                     /locus_tag="VE844_13055"
                     /inference="COORDINATES: protein motif:HMM:NF033550.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3 family transposase"
                     /protein_id="HZC02239.1"
                     /translation="MDVYGIDALLGLPEFRVFDQVIRPKRLELHLQRRESSIVCPRCQ
                     TCCCRVQESRSRCIRDLPILERPVVLRLHLRRFACSECHHRPWETSETFGARVKWTER
                     LYQQVRAEFLGGCPGRELARRYGLSERTVFRWTFERSRGGRPRLLGRAIGIDDYARRK
                     GHRYNTSIVDLDKGRPIATFKGRRADDVLAWFKSRPQSELNRVEVVVLDMSKTYASAV
                     KELFGESVQVIDRFHVVQRAVDALDEVLRSVQKQLHAEEAKALKKLRRRWLKSANQLH
                     VDELIARYEWRRRFPQLREMIDWVQDLRLWFERKYEKPAREALSKLIERASQSAQEPL
                     KRMAGTLTRWFEPIVHYVRNRYSNGITEGFNNQIKLIQRMAYGLRNEHNRRKRIMAYC
                     GKT"
     gene            1565..>1769
                     /locus_tag="VE844_13060"
     CDS             1565..>1769
                     /locus_tag="VE844_13060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013013448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HZC02240.1"
                     /translation="MRIGMMCHASFGGSGRIGLELALALARHGHRVHLFTRTTPLGGA
                     WEPMLNFQLHTLKADEADEPHPST"
BASE COUNT          377 a          472 c          522 g          398 t
ORIGIN      
        1 gatgcttcag cacccgaaag acaaattcaa tccagtggcg acgccgccac cttcgaatca
       61 agaccgggcc actcagtgct gtctctaaag gttcttcgcc aagtttgagg tcagcgcata
      121 gaattgatcc tagtggactt agagcggttc ttgacatgca caggattcct cgcaaatttc
      181 tggaaaacaa tccccccaga aggaggaacc ctgctcatgg acgtctatgg tatcgacgcc
      241 ttgctcggtc tgcctgaatt tcgcgtgttt gatcaggtca tccgccccaa aaggctggag
      301 ttgcatctcc aacggcgaga gagctcgatc gtgtgtccgc gatgccagac gtgttgttgc
      361 cgagttcagg agagccgctc ccggtgcatt cgcgatttgc ccatcctgga acgccccgtt
      421 gtgctgcggt tgcacctgcg gcgctttgcg tgttcagagt gccaccatcg gccttgggag
      481 acgagcgaga cctttggggc ccgagtgaaa tggaccgagc gtctctacca acaagtgcga
      541 gcggagttcc ttggcggatg cccgggtcgc gagttggccc ggcgctatgg tctctccgag
      601 cgcacggtgt ttcgctggac ctttgaacgc agtcggggcg gccgtccccg actgctgggt
      661 cgcgccatcg ggattgatga ctatgcccgg cgcaagggac atcgctacaa cacctcgatt
      721 gtcgacttgg acaaaggtcg cccgattgcc accttcaagg gccggcgggc ggatgatgtt
      781 ctcgcctggt ttaaaagtcg tccgcaatcc gaactcaacc gggttgaagt ggtggtgctg
      841 gacatgtcca agacatacgc gtcggctgtg aaagagctct ttggtgagtc ggttcaggtg
      901 atcgatcgct ttcatgtggt acaacgggcc gtcgatgccc tcgatgaggt gttgcgatcg
      961 gtgcaaaaac aactgcatgc ggaggaagcc aaagcgctta agaagctgcg tcgccgttgg
     1021 ctgaagtcgg ccaatcagct ccatgtcgac gagttgatcg cgcggtacga gtggcgaagg
     1081 cgctttccgc agttgcgcga gatgattgac tgggtgcagg acttgcgcct gtggtttgag
     1141 cgcaagtatg aaaaaccagc ccgcgaggcg ctctcgaagc tgattgagcg tgcgagccag
     1201 agcgcccaag agccgctgaa gcggatggcc gggacgctga cacgttggtt tgagcccatt
     1261 gtccactacg tccgcaatcg ttacagcaac gggatcacag aaggctttaa caaccagatc
     1321 aagctgattc agcgcatggc gtacggtctt cgaaatgaac acaaccgtcg aaagcgtata
     1381 atggcctact gcggaaagac ttagctctgg cctcaaacat ggcgaagagc caaatgtctt
     1441 tttgaaagcc caataaaatc aatctgttga ttttttcgct ttcaccctgt ttttgcccat
     1501 ttttgttatt tggcgaaggt attgaaaaag ctatgtagat aaaaccctct aggggagtat
     1561 gtgtatgcgt attggcatga tgtgtcatgc gagtttcggt ggcagcggac gtattggtct
     1621 cgagttggcg ctcgcgctag ctcgccacgg gcaccgcgtc catctcttca cgcgaacgac
     1681 accactaggc ggcgcctggg agccgatgct caactttcag ttgcatacct tgaaagcgga
     1741 tgaggcggat gagccccacc cctcgacgc
//
LOCUS       DASQSL010001266         2240 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_131492, whole genome shotgun sequence.
ACCESSION   DASQSL010001266 DASQSL010000000
VERSION     DASQSL010001266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2240
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131492"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..467)
                     /locus_tag="VE844_13065"
     CDS             complement(<1..467)
                     /locus_tag="VE844_13065"
                     /inference="COORDINATES: protein motif:HMM:NF021351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GldG family protein"
                     /protein_id="HZC02241.1"
                     /translation="MSNLSRRLKRRVLSTSGLLLAAGLFVAVNIVANQILTSERLDLT
                     ENRLFSLSSGTENILKQLEEPIQLKFYFSAKLLSGAPAFLNYSTRIRDMLEEYIAKSG
                     GKLELSVIDPEPFSEAEDEAVGYGIKQLPVNAAGDMGYLGLVGVNTTDEEEVIP"
     gene            complement(474..1208)
                     /locus_tag="VE844_13070"
     CDS             complement(474..1208)
                     /locus_tag="VE844_13070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HZC02242.1"
                     /translation="MRNILAIFKRELEAYFATPVAYVFIVIFLFLNGIFTFYLGDFYE
                     RNQADLEPFFQFHPWLYLFLIPAISMRLWAEERKTGTIEFLMTLPVSLAQAVLGKFLA
                     AWCFTAIALALTFPIWITVNYLGDPDNTVILAGYLGSLFMAGGFLAIGSCISALTKNQ
                     VIAFVISVVICFAFILSGFPIVLDFFRAWAPQALVEAISSFSFLTHFYSIRRGVIDLR
                     DVIYFATLMAFWLYVNTVVIEAKKGG"
     gene            complement(1205..2173)
                     /locus_tag="VE844_13075"
     CDS             complement(1205..2173)
                     /locus_tag="VE844_13075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZC02243.1"
                     /translation="MDMHAIEVKHLNKQFGPLRAVDDISFTVDRGEVLGFLGPNGAGK
                     STTMRLIAGFLEPTGGTISVCGFDVLDQAIKVKERIGYLPEGAPLYGEMTPAGFLNFV
                     ADIRGLKAHKREERIRDVVQKIHLEPVMDQRIETLSKGYKRRVGLAQAIFHDPEVLIL
                     DEPTDGLDPNQKHEVRTLIKAMAQDKAIIISTHILEEVDAVCTQAIIIARGRLLFNGT
                     PAELEARSRIHNAVSLSVKTETATAAKQRLAALTGVAQVDEVEALNGSSRLLILPKNG
                     KTIVGAVSDLVRTQDWEVSELHVESGRLDEVFRTITTGPEQTEMRS"
BASE COUNT          537 a          621 c          616 g          466 t
ORIGIN      
        1 gggatgacct cctcctcatc ggtcgtattg acgccgacca gacctagata gcccatatcc
       61 ccggcggcat tcacaggcag ttgcttgatg ccatagccga cggcctcatc ctctgcctcg
      121 gaaaagggtt ccggatcaat cacgctgagc tcaagcttac cacccgattt ggcgatgtat
      181 tcttccagca tatcccggat ccgggtgcta tagtttagga aggcgggggc gccgctcaag
      241 agcttggccg agaaataaaa cttgagctgt atcggctctt cgagttgctt caagatattc
      301 tcagtgcccg atgagagtga gaacaatcga ttctcagtga gatccagacg ctctgaggtc
      361 aggatctggt tggctacgat attaacggca acaaaaagac cggccgccag aagcaggcca
      421 ctggtcgaaa gcactcttct tttcaggcgt cgacttagat ttgacatcgg cattcagccc
      481 cctttcttgg cctctatgac aacggtattg acgtacaacc aaaaagccat cagcgtggcg
      541 aaatagatca catctctcaa atcgatcacg cctctgcgga tcgaataaaa gtgggtgaga
      601 aaactgaagg aactgatggc ctcaaccagg gcctgaggcg cccaggcccg gaagaaatcg
      661 agcacgatcg gaaagccgct caaaataaaa gcgaagcaga tgaccacgct gatcacaaag
      721 gcgatgacct ggtttttagt gagcgcggag atgcaggaac caatggcgag gaatccgccg
      781 gccataaaga ggctcccaag ataccccgcg aggatgaccg tgttgtccgg atcgcccaag
      841 taattgaccg tgatccagat cgggaaggta agagcaagcg caatggcggt gaaacaccag
      901 gccgcaagga acttcccgag caccgcttga gcgagggata cgggcagggt catcaagaac
      961 tcgatggtgc cggtcttgcg ctcctccgcc caaagccgca tcgagatcgc cgggatcaaa
     1021 aacaggtaaa gccagggatg gaactggaaa aagggttcga gatcagcctg attgcgctca
     1081 taaaaatcac cgagataaaa ggtgaagatc ccattgagaa acaagaagat aacgataaag
     1141 acataggcca cgggggtggc gaaataggcc tctagctcgc gtttgaagat cgccaggata
     1201 tttctcatga gcgcatctcc gtttgctcgg ggccggtagt gatggtgcgg aagacctcat
     1261 ccagccgccc gctctccaca tgcaactcgc tcacctccca gtcctgggtc cggaccagat
     1321 cgctgactgc accgacaatg gtcttgccgt tcttgggaag gatcaagagg cggctcgagc
     1381 cgttgagtgc ctccacctca tccacttgtg cgaccccggt taatgccgcc aggcgctgtt
     1441 tagcggcagt cgcggtttca gtcttgaccg agagcgagac ggcattgtgg atcctggatc
     1501 gggcctcgag ctcggcgggt gtcccattaa acaggagccg accccgggcg atgatgatgg
     1561 cctgggtgca gaccgcatcg acctcctcca ggatatgggt cgagataatg atggctttgt
     1621 cttgcgccat cgctttgatg agggttctga cctcatgctt ttgattggga tccagaccat
     1681 cggtcggctc atccaggatc agcacctcgg gatcatggaa aatagcctgc gctagcccca
     1741 cccggcgctt atagcccttg gaaagggtct cgatccgctg gtccatgacc ggttccagat
     1801 ggatcttttg gaccacgtcc ctaatgcgct cctctcgctt gtgcgcttta agccctcgga
     1861 tatcggcgac gaagttgaga aaacccgccg gggtcatctc cccatacagc ggtgcgcctt
     1921 ctggcagata accgatccgc tctttgacct tgatggcttg gtcgagcaca tcgaagccgc
     1981 acacgctgat cgtcccgccg gtcggttcga gaaagccggc gatcagcctc atggtagtgg
     2041 atttaccggc gccattgggt cccagaaaac ccagcacctc gccgcgatcg accgtaaagg
     2101 agatatcgtc tacggcgcgc aatggcccaa actgtttatt gagatgtttg acctcaatcg
     2161 catgcatatc catcactcag ctatcggctt gaatttcagg ttacaaacgt agaatctatc
     2221 gcacgttcct caggctttag
//
LOCUS       DASQSL010001267         1870 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_10990, whole genome shotgun sequence.
ACCESSION   DASQSL010001267 DASQSL010000000
VERSION     DASQSL010001267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1870)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1870)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1870
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10990"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(126..557)
                     /locus_tag="VE844_13080"
     CDS             complement(126..557)
                     /locus_tag="VE844_13080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013817170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YqaA family protein"
                     /protein_id="HZC02244.1"
                     /translation="MEADEPAWGISTLFVSAFISATLAPGASEAVLAFLIAHSDLSPG
                     WLLLVATTGNTLGAMTTWLLGLWAAMGYPVEKLTQGQSPKALVVVRRWGAWALLGSWL
                     PIIGDPLCLAAGWLRLPLVPSLLAIAVGKAARYAVVAYIFM"
     gene            complement(622..1458)
                     /locus_tag="VE844_13085"
     CDS             complement(622..1458)
                     /locus_tag="VE844_13085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017842479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HZC02245.1"
                     /translation="MLDKSDKSSVKLRPLVSAVGATFAVTLSSVPLVNAQDNPFSLNE
                     LSNGYRVAQEDTGQKPPEGKCGEGKCSAGMDMSATKSSEPMSSEGVCANMVMDMQGMI
                     MNENKDQLPQDCKAISEEVKITVHAGRKFARKFNGTAFAFDQQEWDVKPCAKITVTFV
                     NEDQTRHQFMVHGLPAYIYPAGMFHMEIMGQGEKTATFIVPSTKKTYLVHCDIAQHME
                     KGMKAQLKVAGGDGDLPSIPGLTGPRYPQEYPEAYPKGAPSPYSASDPTLFRGMKKDK
                     GG"
     gene            complement(1487..1732)
                     /locus_tag="VE844_13090"
     CDS             complement(1487..1732)
                     /locus_tag="VE844_13090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02246.1"
                     /translation="MAHGEDLKPYFTKAFYEKKVPVWFASDPEGWFGEVAEEPASAGS
                     SSASVSVSSPKLFIGLALLAVFVAVLVGLPRIKLRKM"
BASE COUNT          423 a          551 c          477 g          419 t
ORIGIN      
        1 gcgctagtga gcgatatcgc taagattaag tcccacaaca cccatgacaa tcaacccaag
       61 gcttataagc tttgatgtgt ccccttaaat cgaaagatgg agcgtaccat accacgcggg
      121 ggagatcaca tgaagatgta ggctacaact gcgtagcgcg ccgctttacc gaccgcgatc
      181 gccagcaagg acggcaccaa aggcaaacgc aaccagccgg cggctaaaca caggggatcg
      241 ccgatgatag gcaaccacga gccgagaagt gcccatgcac cccagcggcg taccaccacg
      301 agggctttgg ggctctgtcc ttgagtgagc ttctcaacgg gataacccat agccgcccaa
      361 agaccgagca gccaagtcgt catcgcgccg agcgtattgc ctgtcgttgc caccaaaagc
      421 agccatcccg gcgagagatc ggagtgggcg ataagaaagg ccaagacggc ttcagacgcc
      481 cccggggcca aggtggctga gataaaggcg ctgacaaaca gggtacttat gccccaggcg
      541 ggctcatcgg cctccacagg cgcgcaaata gcctgacttc gcttttaaac cgacctgccc
      601 acacggggcg agcagctaat tttaacctcc tttgtccttc ttcattcccc ggaacagggt
      661 gggatccgaa gccgaataag gggaaggagc gccttttgga taggcttcgg ggtactcctg
      721 tggatacctt ggcccggtta ggcctggaat actcggcaga tcgccgtccc ccccggccac
      781 cttcagctgg gccttcatcc ctttttccat gtgctgggca atatcgcagt gcaccagata
      841 ggtcttcttg gtgctgggga cgataaaggt ggctgtcttc tcaccctgac ccattatttc
      901 catatgaaac atcccggccg gatagatata tgctggcagt ccatggacca tgaactggtg
      961 gcgggtctgg tcttcgttga caaatgtcac cgtgatcttg gcgcagggtt tcacatccca
     1021 ttcctgctga tcaaatgcaa acgcggtgcc gttgaattta cgggcaaact tccttcccgc
     1081 atgcaccgtg atcttgacct cctcgctgat cgctttacag tcctgaggca actgatcttt
     1141 attttcattc atgatcatgc cttgcatatc catgaccatg ttggcgcata ctccttcact
     1201 cgacataggc tcggaagact tcgttgcgct catgtccatc ccggcactgc acttcccttc
     1261 accgcattta ccctctggcg gtttctggcc ggtatcctcc tgagccactc tatacccgtt
     1321 tgagagctcg ttcaggctaa acggattatc ctgggcattt actaatggta cgctactcag
     1381 agtaacggca aaggtggcgc ccacggcgga caccaagggt cttagcttga cagaagattt
     1441 gtctgattta tctaacatcg gattttcctc gagttctggc caatgctcac attttcctca
     1501 gcttgatcct cggcagaccc acaagtaccg ccacgaatac cgctaacagg gccaatccta
     1561 tgaataactt cggcgatgac acgctgaccg aggcgctgga agaacccgct gaggctggtt
     1621 cttcagccac ctctccaaac cagccctcag gatccgaggc gaaccacacg ggcaccttct
     1681 tctcatagaa ggccttggtg aagtagggtt tcaagtcttc accgtgcgcc atgggcaggc
     1741 cgttatcgcc taagaacgac tgatacgcga tgaggtttat attccctccc ggttacatcc
     1801 cgtcggtagt gagggtcttt tcattatggg catgggacat ccagatcccg ggcccatagc
     1861 tatgcagacc
//
LOCUS       DASQSL010001268         1496 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_131510, whole genome shotgun sequence.
ACCESSION   DASQSL010001268 DASQSL010000000
VERSION     DASQSL010001268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1496
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131510"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            185..>1496
                     /locus_tag="VE844_13095"
     rRNA            185..>1496
                     /locus_tag="VE844_13095"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          333 a          353 c          520 g          290 t
ORIGIN      
        1 ctgctcgcga gggcgtggaa cgcatgatct tcgggcggga gctggccggg cacgctgttg
       61 ggtgtctgag ggttcggccg tgtggtcgcc ttcagtgccg gccccagtga actcgggatg
      121 tggtcccggg gtgatgggtg gttggtcgtt gtttgagaac tgcacagtga acgcgagcat
      181 ctgtggccaa gtttttaagg gcgcacggtg gatgccttgg taccaggaac cgatgaagga
      241 cgtgggaggc cacgatagtc cccggggagt cgtcaaccag gctttgatcc gggggtttcc
      301 gaatggggaa acccggcagt cgtcatgggc tgtcacccac tgctgaacac ataggcagtg
      361 tggagggaac gcggggaagt gaaacatctc agtacccgca ggaagagaaa acaaccgtga
      421 ttccgggagt agtggcgagc gaaaccggat gaggccaaac ctacgacgtg tgagacccgg
      481 caggggttgc gtcgtggggg ttgtgggatc tctcttttac ggtctgccgg ccgtgagacg
      541 agtcagaaac cgttgatgta ggcgaaggac atgcgaaagg tccggcgtag agggtaagac
      601 ccccgtagtc gaaacatcag cggctcgttt gagagacacc caagtagcac ggggcccgag
      661 aaatcccgtg tgaatctggc gggaccaccc gctaagccta aatattccct ggtgaccgat
      721 agcggatagt accgtgaggg aatggtgaaa agtaccccgg gaggggagtg aaatagtacc
      781 tgaaaccgtg tgcctacaag ccgtgggagc gtcgcgcaag gacttgtcct tgcgtcgtga
      841 ctgcgtgcct tttgaagaat gagcctgcga gtttgcggtg tgttgcgagg ttaacccgtg
      901 tggggaagcc gtagcgaaag cgagtccgaa cagggcgttt cagtagcacg ctcaagaccc
      961 gaagcggagt gatctagcca tgggcaggtt gaagcggagg taagacttcg tggaggaccg
     1021 aacccaccag ggttgaaaac ctgggggatg acctgtggtt aggggtgaaa ggccaatcaa
     1081 actccgtgat agctggttct ccccgaaatg catttaggtg cagcgtcgtg tgtttcttgc
     1141 cggaggtaga gcactggata ggcgatgggc cctgccgggt tactgacctt agccaaactc
     1201 cgaatgccgg taagtgagag cgcggcagtg agactgtggg ggataagctc catggtcgag
     1261 agggaaacag cccagatcgc cagctaaggt ccctaaatct tcgctaagtg ggaaaggatg
     1321 tggagttgcc cagacagcca ggaggttggc ttagaagcag ccacccttga aagagtgcgt
     1381 aatagctcac tggtcaagtg gttccgcgcc gacaatgtag cggggctcaa gtacaccgcc
     1441 gaagctgtgg cactcacaca tgaactccgc cggccctttc gggggttggt gcaggt
//
LOCUS       DASQSL010001269         1018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_11000, whole genome shotgun sequence.
ACCESSION   DASQSL010001269 DASQSL010000000
VERSION     DASQSL010001269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11000"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..794
                     /locus_tag="VE844_13100"
     rRNA            <1..794
                     /locus_tag="VE844_13100"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            complement(801..>1018)
                     /locus_tag="VE844_13105"
     CDS             complement(801..>1018)
                     /locus_tag="VE844_13105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02247.1"
                     /translation="QGSRKRRFPTFPTDTDFSDFIVVHTRLTTILVCWGCRLFQTLQT
                     SVTGSVLSFPTLNAFHIQEWIRTTSFS"
BASE COUNT          246 a          244 c          330 g          198 t
ORIGIN      
        1 ggtctgcagt cgatacgagc aaactagagt gttgcagggg agactggaat tcctggtgta
       61 gcggtgaaat gcgcagatat caggaggaac accggtggcg aaggcggttc tctgggcatg
      121 acctgacgct gaggagcgaa agtgtgggga gcgaacagga ttagataccc tggtagtcca
      181 caccgtaaac gttgggcgct aggtgtgggg tggtcttcaa cccgttctgt gccgcagcta
      241 acgcattaag cactccgcct ggggagtacg gccgcaaggc taaaactcaa aggaattgac
      301 gggggcccgc acaagcggcg gagcatgtgg cttaattcga tgcaacgcga agaaccttac
      361 ctaggcttga catgcaaggt aaagcggatg aaagtccgtg tccttacggg ccttgcacag
      421 gtgatgcatg gctgtcgtca gctcgtgtcg tgagatgttg ggttaagtcc cgcaacgagc
      481 gcaaccctcg tcctatgttg ccagcggctc tcttcggagg ggccggggac tcatgggaga
      541 ctgccggggt caactcggag gaaggtgggg atgacgtcaa atcatcatgc cccttatgcc
      601 tagggctgca aacatgctac aatggctggt acaaagggct gcgaactcgc gagagtgagc
      661 gaatcccata aagccagtct cagttcggat cgtagtctgc aactcgactg cgtgaagtcg
      721 gagtcgctag taatcgcgga tcagcaacgc cgcggtgaat acgttcccgg gccttgtaca
      781 cgattaaagg cgcagggcag ctacgagaac gaagtggtgc gaatccactc ctggatgtga
      841 aacgcattca gcgtagggaa ggacaggacg gatccggtaa cggacgtctg aagggtctgg
      901 aacaaacggc agccccaaca cacaaggatc gtggtgagtc gtgtgtgtac cacgatgaaa
      961 tcactgaagt cagtgtccgt tgggaatgtc ggaaagcgcc tcttacgtga cccctgga
//
LOCUS       DASQSL010001270         1008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_23790, whole genome shotgun sequence.
ACCESSION   DASQSL010001270 DASQSL010000000
VERSION     DASQSL010001270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23790"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1008
                     /locus_tag="VE844_13110"
     CDS             <1..>1008
                     /locus_tag="VE844_13110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="DDE transposase"
                     /protein_id="HZC02248.1"
                     /translation="ARARPHQDRNVSLASVTRDAAATANAVTVWATQLGFADPSAMDI
                     DSTVQEANIAYPSDAHLMVKMPLLVNKVWMYMKQNVSFFADFIPCVDVKAVKAKARAY
                     LFRDRQDPDHAKTTFQELWHEAFAQTSNVRKYFDVLLDYDLQRMPWNIRRALDQVKEH
                     CSNLFLHVASFMCRGVVIPDKALAFHARAVSCFNKGKAARALECGRAFQLGRIGGNFL
                     VVGTCTSIRMEDKASVRPMVEAHQGLVGQGMLQSFGTDKGYYSQTNYNYLCAVAGLKE
                     LGLQQPGLDIRGPAEGEAETRARLADRRAGIEPLIGHAKQGGQLGQSRMKTDDTTLAA
                     G"
BASE COUNT          220 a          277 c          295 g          216 t
ORIGIN      
        1 tggcacgcgc ccgaccacac caagatcgaa acgtttcgct cgcgtctgtc accagagacg
       61 cagcggcaac cgccaatgcg gtcaccgtct gggcgaccca actgggcttt gctgatcctt
      121 ccgccatgga tatcgattcg acggtgcaag aagccaacat cgcctatccc tctgatgccc
      181 acctgatggt gaaaatgccc cttttggtca ataaggtttg gatgtatatg aagcaaaatg
      241 tttcgttctt cgccgacttt ataccatgtg tcgatgtcaa agccgttaaa gccaaggcaa
      301 gagcgtactt gtttcgcgat cggcaggatc ctgatcacgc gaagaccacg ttccaagagc
      361 tctggcacga agcctttgcc cagacaagca acgtgaggaa gtatttcgat gtcttgctcg
      421 actatgatct ccaacggatg ccctggaaca tccgtcgggc attggatcaa gtcaaggagc
      481 actgctccaa cctcttcctc catgtggcga gctttatgtg tcgtggggtg gtcattccag
      541 acaaggcctt ggccttccac gcccgggccg tgagctgctt caacaagggc aaggcagcac
      601 gcgcgctcga gtgtgggcgc gcctttcagc tcggtcgtat tggagggaat ttcctcgtgg
      661 tcggtacctg tacgtcgatc cggatggaag acaaagcctc cgtacgcccg atggtcgaag
      721 cacatcaggg tcttgttggc caaggtatgt tgcagtcgtt cgggacggat aagggctact
      781 acagccagac caattacaac tatttgtgcg ctgtggcagg gctgaaggag ttgggtctcc
      841 agcaacccgg tttggatatc agggggccgg cggagggtga ggcggaaact cgcgcccgcc
      901 ttgcggatcg ccgagccggc attgaaccct tgattgggca tgccaaacag ggcgggcaac
      961 ttggtcagag tcggatgaag acagacgaca cgaccctagc agcgggct
//
LOCUS       DASQSL010001271         1218 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_187739, whole genome shotgun sequence.
ACCESSION   DASQSL010001271 DASQSL010000000
VERSION     DASQSL010001271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1218)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1218)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1218
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187739"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            345..590
                     /locus_tag="VE844_13115"
     CDS             345..590
                     /locus_tag="VE844_13115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02249.1"
                     /translation="MVLLRRGMAKGASTARLARELGVSRKQLHTLRQRVQANLNATAP
                     TEAMVGTAFEADELYQNAGENKYAPSRPWRSAAPTCQ"
     gene            640..1053
                     /locus_tag="VE844_13120"
     CDS             640..1053
                     /locus_tag="VE844_13120"
                     /inference="COORDINATES: protein motif:HMM:NF024172.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02250.1"
                     /translation="MISRETGEQRWWVCDHADTPTCAALIAENLPAGRTWLYTDEWQS
                     YGGSHPCHATVRHGVHEWARDDDGDGRREVHGNSCEGAGAALRTYLRAFRGVHKQYLY
                     LYVATYEALVNTKRVTPTLIQRMCVHDFSAYAGYT"
BASE COUNT          269 a          362 c          351 g          236 t
ORIGIN      
        1 ataaaataaa aatctatacc agaagagaat atatcgagct tatcgagaag tacagaagtt
       61 tagtaaaaga atgaacaagt ggctcatgtg taactaccgt gctggatgtg gtatcctcac
      121 ccgatgattg actttccgat cgacgagtta ctggacgaca atatttgcac gctatggctc
      181 gaacggcatc tccacccgga cggactgata tgcccacatt gtgggcaccc cgagcggcgc
      241 ctgttccgtg cccaaggcca ctttccggcc taccgctgtc ggacctgcca gggctcttac
      301 accctgctca cggggaccgt cttcgcgaaa acgcgccagc gcccttggta ctgttgcggc
      361 gcgggatggc caagggcgcg tccacggcac gcctcgcgcg ggaattgggt gtctcacgca
      421 agcagctcca tacgctacgg cagcgcgtcc aagccaactt gaacgcgacc gcacccaccg
      481 aggcgatggt cggcaccgcc tttgaggccg atgaactcta ccagaacgcc ggggaaaaca
      541 agtacgcccc atcgcgaccc tggcgatccg ccgcgccgac gtgccaataa acggaagggg
      601 catgggacgt atgccaatga tcgcccaccc atcctcagcg tgatctcgcg tgagacgggg
      661 gagcagcgct ggtgggtctg cgaccatgcc gacacaccca cctgtgccgc cctgatcgcg
      721 gagaaccttc ctgcgggccg cacgtggctc tataccgatg agtggcagag ctatggcggg
      781 agccatccgt gccatgccac cgtccgccac ggcgtgcacg agtgggcgcg ggatgatgac
      841 ggggatggcc gacgcgaagt gcacggcaac tcctgtgaag gggccggtgc ggcgcttcgg
      901 acctatctgc gcgccttccg cggagtgcat aagcagtacc tgtatctcta tgtcgcgacg
      961 tatgaagccc tcgtcaatac taaacgggtc acccccacgc tgattcaaag aatgtgcgtt
     1021 catgacttct cagcgtacgc tggttacaca tgagccaaat tctttaagtg gtgtgagatt
     1081 ctagtttggc cattttgagt aggcaggagg gggaatgtac cttacgatag atgagctttc
     1141 gccaaagttc acgctatcga aggagacatc ccatgcccca cctgcccgcg gaaatcatac
     1201 aggtattggc gcctttcg
//
LOCUS       DASQSL010001272         2061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_197237, whole genome shotgun sequence.
ACCESSION   DASQSL010001272 DASQSL010000000
VERSION     DASQSL010001272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2061
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197237"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            34..513
                     /locus_tag="VE844_13125"
     CDS             34..513
                     /locus_tag="VE844_13125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 domain-containing protein"
                     /protein_id="HZC02251.1"
                     /translation="MKQTILDVLRYLFEYYSAEETASGLDQEHLQSRLREAGFEDNEI
                     LRAIQWLEELAILQEEGIEDPRPKTNSIRVFTPQEAAKLDRESRGFLLFLEQLGVLDH
                     HSRELVIDRLLALESDELDLEQVKWVVLMVLLNQPGREENLVWLEEIVMDESRGGLH"
     gene            541..>2061
                     /gene="topA"
                     /locus_tag="VE844_13130"
     CDS             541..>2061
                     /gene="topA"
                     /locus_tag="VE844_13130"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014705479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HZC02252.1"
                     /translation="MADKIADKLVVVESPAKAKTIKRYLGAQCEVLASYGHVRDLLPK
                     EGAVEPAEGFAMHYELIEKNIKHVEAIAKAMRKAKALYLATDLDREGEAISWHLTEIL
                     KDRAVLNNKPVYRIVFHEITKRAIEEAMQNPRKLSLDLVNAQQARRSLDYLVGFNLSP
                     LLWKKIRQGLSAGRVQSPALRMIVEREEEIEAFKPREYWTIEADLSHAREAFIAKLIE
                     YHGEKLKQFSITTADHAEKARHDLLKRAAGKLTVTRIEKKQRKRSPAPPFITSTLQQE
                     GARKLGFTAQRTMRIAQQLYEGIDIGEGSVGLITYMRTDSVNLAAEAMHEIRRWVSER
                     YGVAQIPSQPRRYKTKAKNAQEAHEAIRPTAVTRTPPELKSHLSPDQYKLYELIWKRT
                     VACQMIDATVDTLAIDLGCGEGNIFRATGSTIADPGFMVVYQEGRDETRAEHEDAKLP
                     PMKPGDHVALTAIRAEQHFTEPPPRYTEATLVKSLEEYGIGRPSTYASIISTLQQRE"
BASE COUNT          502 a          536 c          589 g          434 t
ORIGIN      
        1 ccggtgggct gtacattcgg cacaggtaat gaaatgaaac aaacgatatt agatgtccta
       61 cggtacctct ttgaatacta ttcagcagag gagaccgcat ctggtttaga tcaggagcac
      121 ctgcaatcga gattgcgcga ggccggcttt gaggataatg agatcctgag ggctatacag
      181 tggctcgagg agttggctat cttacaagag gaggggatcg aggaccctag gccgaaaacc
      241 aattcgatcc gagtatttac tccccaggaa gccgctaaac tcgatcgcga gagccgaggt
      301 ttcttgttgt ttctggagca acttggggtg ctcgaccatc acagccggga actggtgatc
      361 gatcggctct tagccctcga gtctgatgag ctcgatctag agcaggtaaa atgggtggtg
      421 ctcatggtgc tcttgaatca acctggccgc gaggaaaacc tggtttggtt ggaggagatt
      481 gttatggatg aatcgcgcgg cgggcttcat tgaacctatt ttttaaaggg gaaacctccc
      541 atggcagata agatagcaga taagctggta gttgtagaat cgccggcgaa ggcgaaaacc
      601 attaagaggt atctcggcgc tcagtgcgaa gtgctggctt cctatggcca tgtgcgcgat
      661 cttcttccca aggagggtgc ggtggagccg gcagaggggt ttgccatgca ctacgagctg
      721 atcgaaaaaa acatcaagca tgtggaggcg attgccaagg caatgcgcaa ggccaaggcg
      781 ctttacctcg ctaccgattt ggaccgggag ggtgaggcca tctcctggca cctgaccgag
      841 atcctgaaag atcgtgctgt gctgaataat aagcctgttt atcggatcgt atttcacgag
      901 atcaccaagc gtgccatcga agaggccatg caaaacccac ggaaactctc gttggatctc
      961 gtcaatgctc agcaggcccg gcgctcgctc gattatcttg tgggttttaa cctctcgcct
     1021 ttactttgga agaagatccg gcagggatta tcggccgggc gggtccagag tcccgctctg
     1081 cgcatgatcg tggagcgtga agaggagatc gaagccttca aaccgcgcga atactggact
     1141 atcgaggccg atctatccca tgcacgcgaa gcgtttattg ccaagctgat tgaatatcac
     1201 ggtgagaagc tcaaacaatt ctctatcact accgccgatc atgccgagaa ggctcggcac
     1261 gatctgctca agcgcgcggc agggaaactc accgtcactc ggatcgagaa aaagcagcgt
     1321 aagcgttctc ctgccccgcc cttcattacc tctaccttgc agcaagaagg tgcgcgtaaa
     1381 ctggggttta ccgctcagcg gactatgcgg atcgcccaac agctctatga gggcattgat
     1441 atcggggaag ggtccgtagg tctcatcacg tatatgagaa ccgactccgt gaacctcgcc
     1501 gccgaagcta tgcacgagat ccgaaggtgg gtgtcggaac gctatggtgt agctcagatc
     1561 ccatctcagc cgcgccgtta caagaccaag gctaaaaatg cccaagaggc gcacgaggcg
     1621 atacgtccta ccgcggtcac aagaacgcct ccagagctca agtctcattt gagccccgat
     1681 caatacaagc tgtatgagct catctggaaa cgcaccgtgg cgtgccagat gatcgatgcc
     1741 accgtcgata cgctcgcgat tgaccttggc tgtggcgaag gcaatatctt tcgggccacc
     1801 ggttcgacca ttgcagatcc aggattcatg gtggtctatc aggagggacg ggatgagacg
     1861 cgggccgagc acgaggacgc caaactgcca ccgatgaaac cgggtgatca cgtggcgctt
     1921 actgcgatcc gggccgagca gcacttcacc gagccgccgc cgcgctatac cgaggccacg
     1981 ttagtgaaat ctttagaaga atatgggatc ggtcggcctt cgacctatgc ctcgatcatc
     2041 tcaaccctgc aacaacgcga a
//
LOCUS       DASQSL010001273         1006 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_104168, whole genome shotgun sequence.
ACCESSION   DASQSL010001273 DASQSL010000000
VERSION     DASQSL010001273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104168"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            24..>1006
                     /locus_tag="VE844_13135"
     CDS             24..>1006
                     /locus_tag="VE844_13135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HZC02253.1"
                     /translation="MAEFYDVVELSTAVKPWLLGHLLNERGLERVAYFDPDIRIYDRL
                     DRVNQLTREYELVLIPHVTSPMPRDGKKPSEADILIAGTYNLGFIALERGPRTDKLLG
                     WWSERLKTDCVVAPELGYFVDQRWIDFIHGVMPGFHVLNDPGYNVAYWNLHGRELTNK
                     KGRYYVNGEPLRFFHFSGFDPHHRDRLSKHQNRIKLRRGSALARICDEYAKALLEHGY
                     NEVKDWPYTYGTLPNGVRLSPGMRRLYRAGTESGELEVSIFTLEGADRLVAWLNEPAP
                     VGGEYGVTRYLYEIYSKRADLRRAFPNLDSPDAARFIAWGQTHGNVELPVP"
BASE COUNT          214 a          306 c          292 g          194 t
ORIGIN      
        1 tcaatataga cgactacgag cacatggctg agttctatga cgtggtcgaa ctctcgacgg
       61 ccgtaaaacc ctggctcttg ggccacctac tcaacgagcg tgggctggag cgggttgcat
      121 acttcgaccc ggatatacgg atctatgatc gcttggaccg agtgaaccaa ttgacgcggg
      181 agtacgagct tgtcctgatc ccacacgtaa cttcccctat gccccgcgac ggcaagaagc
      241 cttccgaagc agacatcctg atcgccggca cctacaacct gggctttatc gcactggagc
      301 gcggaccccg aacagacaag ttgctcggct ggtggtccga gcgcctgaag accgactgcg
      361 tggttgcgcc ggaactcggc tacttcgtcg accagcgatg gatagacttc atccacggcg
      421 tgatgccggg cttccacgtc ctcaacgatc cgggctacaa cgtggcctac tggaacctgc
      481 acggccggga gcttactaac aagaaaggcc gctactacgt gaacggagag ccgctgcggt
      541 tcttccactt cagcggtttc gatccccacc atcgagaccg gctcagcaag caccagaacc
      601 gcatcaagct acgcaggggt tctgcgctag cccgcatctg tgatgagtat gctaaggcgc
      661 tgctggagca tggctacaat gaggtcaagg attggcccta cacttacggc acgctaccca
      721 acggagtcag gcttagccca ggaatgcgcc ggctctatcg ggcgggcacg gagtcaggcg
      781 agttggaggt ctctattttc accctggagg gtgccgatag gttagtcgcc tggctcaatg
      841 agcctgcacc ggtgggcggg gagtacggcg taactcgcta cctttacgag atctactcta
      901 agcgagccga tctgcgacga gcgtttccaa acctcgacag ccccgacgca gcacgcttca
      961 tcgcgtgggg ccagactcac gggaatgtcg agctgccggt ccctca
//
LOCUS       DASQSL010001274         1149 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_63200, whole genome shotgun sequence.
ACCESSION   DASQSL010001274 DASQSL010000000
VERSION     DASQSL010001274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63200"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..811)
                     /locus_tag="VE844_13140"
     CDS             complement(<1..811)
                     /locus_tag="VE844_13140"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC02254.1"
                     /translation="MPGTTILDIPQQEQEQMLAALRRARYGYLLALHILLLCAAGRKP
                     TEIAAFLLCSRSRVYRTVRLYRAGQLGLTVDVNGHLVAPVRTTILFPWIRRSMSALLK
                     TPPRTYGWCRTRWSGATLAAQLKAQHGLDVSAWTVRRWLHEMGWVWKRAKLIAKDDDP
                     ERVERLARIRFQTEHLQAREMMVFADELDIHLLPKVGSAWMPKGSQEEVLTPGKNEKH
                     YLAGALNSHTGELLHCLGSRKNNGLFRDLLTLLDRTYPEPWVSRLYVVVDNY"
BASE COUNT          274 a          302 c          330 g          243 t
ORIGIN      
        1 tgtagttatc caccacaaca tagagacgac tgacccaggg ctcgggatag gtgcgatcca
       61 gtagagtcag gaggtcgcga aataacccat tgtttttacg agaacccaga caatggagca
      121 actcgccagt gtgggaattg agggcacccg ctagataatg tttttcattc ttgcccggcg
      181 tcaggacctc ttcttggctc cctttgggca tccaggccga accgactttg ggtaacagat
      241 ggatatcgag ttcatcggca aagaccatca tctcacgggc ttgcaagtgc tcggtctgaa
      301 accgaatccg ggccaagcgc tcgacccgct ccggatcgtc atctttggcg atgagcttgg
      361 cccgtttcca cacccaaccc atttcatgga gccagcgtct gacggtccaa gcggagacgt
      421 caaggccatg ctgggccttg agttgagccg ccaatgtggc gccactccag cgggtgcggc
      481 accagccata ggtcctgggt ggggtcttga gtaaggcgct catcgagcgt ctgatccaag
      541 ggaacagaat tgtggtgcgc acaggagcca ccaggtgacc gttgacatcc acggttaagc
      601 cgagttgtcc ggcacgataa aggcgaacgg tacggtaaac acgggagcgc gagcacaaca
      661 ggaaagccgc aatctcggtc ggcttccgcc ccgcggcaca cagcagtaaa atgtgcaagg
      721 ccaagagata gccatagcgg gcgcggcgaa gggctgctag catctgctct tgctcttgtt
      781 gggggatgtc cagtatggtt gtgccaggca tggtgaggct ccttgatatg ggatggatgt
      841 tggggaacgt ccaacgtatc atacaggcaa accccgccat aggatccttt acgtgggtga
      901 ggaattaagc tgactggact ttccgaggga tataaactca taagccttta aaaaacaatt
      961 atcggacccc atgttatgcc ctaaaaaccc aaccgagtta attccgcact ggcgtaaagg
     1021 atcctatggc ggggtttgtc atacaggaac ctcactgtac cgatctcatg cactctgatt
     1081 taggcaacgt gtgggaatgg tgccgcgatg gcaagcgggt ctatacggcc gataccgtaa
     1141 ccgatcctt
//
LOCUS       DASQSL010001275         2692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_63205, whole genome shotgun sequence.
ACCESSION   DASQSL010001275 DASQSL010000000
VERSION     DASQSL010001275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2692
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63205"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..684)
                     /locus_tag="VE844_13145"
     CDS             complement(<1..684)
                     /locus_tag="VE844_13145"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HZC02255.1"
                     /translation="MTDSQKWLWVSGVFALGWLLYLLSPVLTPFLIAALLAYLGDPIV
                     DRLEALRYSRTTAIITVFAVMMFVFLSLVLVLLPIVQSQAVTLMAYIPVAFEWLQQHV
                     APRIMALPGMETSNLDAAVKQAIADHWQGISQVLTRILSTVGQSGQVLLGWLFYALLV
                     PVVTFYLLRDWDILITHVHDLLPRRHEPRITSLARECDEVLAQFLRGQLLVILVLVAL
                     YTTGLWAIGL"
     gene            complement(704..1738)
                     /locus_tag="VE844_13150"
     CDS             complement(704..1738)
                     /locus_tag="VE844_13150"
                     /inference="COORDINATES: protein motif:HMM:NF021367.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2066 domain-containing protein"
                     /protein_id="HZC02256.1"
                     /translation="MTERLRWLGFFLLLVLEPVGGTTPTDLYEAEVSISNRDSAHETQ
                     AMKEALRAVLLKLSSDRNAATGTEIARLLEEVRDYVQHLQYREVVTGPVPGLKLWVQF
                     DRKALDKGLRESQLPLWEQDRPSVLIWLMVAEESARRLIGAGDPAGYIDTLQSRAAAR
                     GLPVFLPLLDLEDEIRVNIDEGDEGLNERIFAASSRYGADAVLLGRLTRLPVGGFQAQ
                     WSLSLPGRILAWSAQGERPEPVLEAGIDEVIDRLATPVRSFAPSKAGGLVLIVEGVYN
                     LDHYERVQHYLKSLREIKSVVVKQIEPERVVFLVVARGGSEAVAEAIAKGDVLQPLTP
                     EEGRYRLVAE"
     gene            1814..>2692
                     /gene="purM"
                     /locus_tag="VE844_13155"
     CDS             1814..>2692
                     /gene="purM"
                     /locus_tag="VE844_13155"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020564904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HZC02257.1"
                     /translation="MDSTSKSPLHYKDAGVDIDRGNQLVERIKPLAEVTHRPGVLGGL
                     GGFGALFDLSQTNYRTPILVSSTDGVGTKLKLAIELKRHDTIGIDLVAMCANDVLAQG
                     AEPLFFLDYFATAKLDLEVAIHVIAGIARGCELAGAALVGGETAEMPDMYSPGDYDLA
                     GFCVGVAEADRIIDGRQVRVGDAVIGLASSGPHSNGYSLIRKIIKLTRTDLEHDFHGR
                     SLGETLLEPTSIYVKSVLALIRKIPVHALAHITGGGLLENLPRVLPKDTCILIDAGAW
                     PWPPIFKWLETTGNIDK"
BASE COUNT          618 a          813 c          719 g          542 t
ORIGIN      
        1 cagacctatt gcccaaagtc cggtcgtata aagcgccacc aacaccagga taaccagcaa
       61 ttggccgcgt agaaactggg cgagcacctc atcgcattcg cgcgcaagac tcgtgatcct
      121 gggctcatgc cggcgcggca atagatcgtg gacatgggtg atgaggatat cccagtcgcg
      181 caagagataa aatgtaacca ccgggaccag cagggcatag aacagccagc ctagcaggac
      241 ttggccagac tggcctacgg tacttaggat cctggtcagg acctggctta tcccttgcca
      301 gtgatcggcg attgcctgct tgacagccgc atcgaggttt gaagtctcca tgccggggag
      361 ggccatgatc cggggcgcca catgctgttg caaccactca aaagccacgg ggatgtatgc
      421 catcaacgtc accgcttggc tctgcactat aggcagcaag accaaaacca agcttaggaa
      481 gacgaacatc atcacggcaa ataccgtgat gatcgcggtt gttcgagagt agcggagcgc
      541 ttctaagcga tccacaatcg gatcgccgag ataggccagc aacgctgcga tcaaaaacgg
      601 cgtcagcacc ggcgagagca ggtacaaaag ccagcctagc gcgaacacac cgctcaccca
      661 tagccacttt tgtgaatcgg tcattgcgat ttcaatagga ttattattct gcaacaagcc
      721 ggtaacggcc ctcctcggga gtaaggggct gcaaaacatc ccccttggca atcgcctcgg
      781 cgaccgcctc tgatcccccg cgggcgacga cgagaaatac tacgcgttca ggctctatct
      841 gttttaccac gactgatttt atctccctaa gcgatttaag gtaatgctgg acacgttcat
      901 agtggtctag gttgtaaact ccctcgacta tgagcacaag gcccccggcc ttagagggag
      961 caaagcttct caccggcgtt gcaagcctat cgatcacctc gtcgatgccc gcctccaata
     1021 ccggttccgg ccgttcaccc tgggcggacc acgctaagat ccgacccggg agagacaggc
     1081 tccattgggc ctggaagcct cccactggga gacgggtcaa gcgacccagc aaaaccgcat
     1141 cggcaccata acggcttgag gccgcgaaga tccgctcgtt caacccttca tctccctcat
     1201 ctatattgac ccggatctca tcttccagat cgagtaaagg caggaataca ggcaggcccc
     1261 gcgccgctgc ccggctctgt aaggtatcga tatagcccgc agggtcaccc gcaccgatca
     1321 gccgacgggc gctctcctcc gctaccatca accagatcag caccgacggg cggtcctgtt
     1381 cccagagagg gagctgagac tcgcgcaagc ccttatcgag ggcctttcga tcgaattgca
     1441 cccaaagttt caaacccggc accgggcccg tcacgacctc gcgatactga aggtgttgga
     1501 cataatcccg cacctcctcc agcaagcggg cgatctcggt tcccgttgcg gcattgcggt
     1561 cgctgctgag cttgagcagc accgcgcgca acgcttcttt catggcttgg gtctcatggg
     1621 cgctgtcgcg attactgata ctcacttcgg cctcgtagag gtccgtgggc gtagttcctc
     1681 ccactggctc caagaccagt agcagaaaaa accccaacca cctcagacgc tcagtcatac
     1741 ggaaaacgct atgcgaagac actcgttctc gtcaagattt gcagccggtt aaagccatcg
     1801 ctactatatt tgtgtggatt ctacctccaa atcaccttta cattataaag atgccggtgt
     1861 cgatatcgac cgcggcaatc aactggtcga gcgtatcaag ccgctggccg aagtcacgca
     1921 tcgtcccggg gtcttaggag gtctcggcgg ttttggggcg cttttcgacc tctcccaaac
     1981 caattaccgg acgcctatcc tggtctcttc taccgacggg gtcggaacta aacttaagct
     2041 cgctatcgag ctgaagagac acgacaccat cggcatcgat ctcgtggcga tgtgcgccaa
     2101 cgatgtgctg gcacagggag ccgaaccgtt attcttttta gattacttcg ccaccgctaa
     2161 actcgacctc gaagtcgcca ttcacgtgat cgccgggatc gcccggggat gcgagctcgc
     2221 gggtgctgcg ctggtagggg gtgaaaccgc tgagatgccc gatatgtata gtcccggcga
     2281 ctatgacctc gcgggtttct gcgtgggagt ggccgaagcc gacaggatta tcgatggccg
     2341 tcaggtccgg gtaggcgatg ccgtgatcgg tctcgcctca agcgggccac actcgaacgg
     2401 ttattccttg atccgtaaga tcattaaact cacacggacg gatctcgagc acgacttcca
     2461 cgggcggagt ctcggtgaaa ccttactgga accgaccagt atctacgtca aatcggtact
     2521 ggccttaatc cggaagatac cggtacacgc actggcccat atcacgggcg ggggactact
     2581 ggaaaacctc ccgcgggtat tgcccaaaga cacctgcatt ctcatcgatg ccggtgcttg
     2641 gccatggccg cccattttta aatggttaga gactaccggc aacatcgaca ag
//
LOCUS       DASQSL010001276         1237 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_77487, whole genome shotgun sequence.
ACCESSION   DASQSL010001276 DASQSL010000000
VERSION     DASQSL010001276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1237
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77487"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..886)
                     /locus_tag="VE844_13160"
     rRNA            complement(<1..886)
                     /locus_tag="VE844_13160"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            complement(1142..>1237)
                     /locus_tag="VE844_13165"
     rRNA            complement(1142..>1237)
                     /locus_tag="VE844_13165"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          199 a          420 c          333 g          285 t
ORIGIN      
        1 tctccgggct tgattagcct ttcactccga cccacaggtc atccgcccag ttttcaacct
       61 aggtcggttc ggccctccac ggggtcttac ccccgcttca gcctgcccat gggtagctcg
      121 cccggtttcg ggtctaccgc ccctgactga gtcgccctat tcggactcgc tttcgctgcg
      181 gctccgctca tcgcttaacc ttgccaggga cgagtaactc gccggctcgt tatgcaaaaa
      241 gcacgccgtc acacccgaag gtgctccgac cgcttgtagg cacacggttt caggtactat
      301 ttcactcccc ttctggggta cttttcacct ttccctcacg gtactagtcc gctatcggtc
      361 accagggagt acttagcctt ggagggtggt ccccccagat tcagaccgcg tttcacggga
      421 gcggtcctac tcaggaacgg gcccgggagg ccatctgctt tcgcctacgg ggctgttacc
      481 cgctgtggcg cctgtgttcc acggatcttc ggctagcaaa tgactttgtg actcccgccg
      541 ggagatgcag ctcccgggaa gctcgtccta caaccccggc tacgcaacgc ctgcacgctt
      601 gcacgtcgcc ggtttgggct ggtccccttt cgctcgccac tacttgggga gtctcggttg
      661 atttcctttc ctcgaggtac tgagatgttt cagttccctc gcttgccttc gtgcgcctat
      721 gaattcagcg caggagggca ccgcattacc ggtgccgggt ttccccattc gggaatccgc
      781 gggtcaaagg ctgttcagca cctcaccgcg gcttatcgca gccgtccacg cccttcatcg
      841 actcctagtg ccaaggcatc caccgtgtgc ccttactatc ttgacggtga tcgttgatgc
      901 cccgcaatcg cctaagcgat cgcggttttc aacggtgatc tttccgttgt ttggccatgc
      961 aaatgcagtt ttcaaggtcc ggcgagggcg caaccggggg gactccccgg ctggtctctc
     1021 aaaactcagc agtacgcgcc cgccggcacg aggccaacgg gctccaggct tggtcgacgt
     1081 tctagatgcg cctcgcaggc cagaaggcct ggaggccggc tctcgttcga gagctcccta
     1141 gaaaggaggt gatccagccg caccttccgg tacggctacc ttgttacgac ttcaccccaa
     1201 tcacgagccc caccttcgac ggctccctcc cagaggg
//
LOCUS       DASQSL010001277         1934 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_131568, whole genome shotgun sequence.
ACCESSION   DASQSL010001277 DASQSL010000000
VERSION     DASQSL010001277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1934
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131568"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..467
                     /locus_tag="VE844_13170"
     CDS             <1..467
                     /locus_tag="VE844_13170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011480423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZC02258.1"
                     /translation="AKRGFCVRIAYNVVDALRLAEERMPAYAVVDLKLSGPSGLELVA
                     ELSVRDPAIKIVVLTGYASIATAVEAIKLGATHYLTKPADADEIVAAFEREHGDPAVP
                     VTSQTLSVNRLEWEHIQRVLTECGGNVSAAARQLGMHRRTLQRKLNKYPVRR"
     gene            478..855
                     /locus_tag="VE844_13175"
     CDS             478..855
                     /locus_tag="VE844_13175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006999889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mth938-like domain-containing protein"
                     /protein_id="HZC02259.1"
                     /translation="MKLEFDSGTALYTIRAYRPGAIVVNDEILTRSFILLPDRLIRDW
                     EPQTFEQVARRHFDEIANLAPEIVLFGTGTRLWFPAPELTVALLRKNIGLETMDTAAA
                     CRSYSILMSEGRRVAAALLMISA"
     gene            complement(852..1859)
                     /gene="rpoS"
                     /locus_tag="VE844_13180"
     CDS             complement(852..1859)
                     /gene="rpoS"
                     /locus_tag="VE844_13180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011507924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoS"
                     /protein_id="HZC02260.1"
                     /translation="MADEQDEDEIFNSSEEEGLKIELSLFEEAEKDDVLLNDLPRLIA
                     QEAQWSKEDVLESEVDTTRLYLSEIGISPLLTAQEEVALARAAHQSDQKSRRRMIESN
                     LRLVVKIARRYTNRGLALLDLIEEGNLGLIRAVEKFDPEKGFRFSTYATWWIRQTIER
                     ALMNQTRTIRLPIHVVKDVHGYSRTVRKLTQTLGREPNYQEVAHALNWSSGYVRWMQS
                     LYDRVTSVDMPVEPDSDRSLIETIPDEQNIDPAVLLQDTDVQEHIETWLSQLDDKQRA
                     VVARRFGLDGREAATLEELGNELGVTRERVRQIQLEALKRLRWILQQEGYSGDALFKE
                     V"
BASE COUNT          417 a          551 c          521 g          445 t
ORIGIN      
        1 tagccaaacg tggattttgc gtgcgcattg cctataacgt cgtggatgcc ctccgcttgg
       61 cggaggagcg catgcccgct tatgcggtcg ttgatctcaa gctgtcaggt ccttcgggat
      121 tggaattggt cgccgagctc agcgtgcgcg acccggctat aaagatcgtg gtgttaacgg
      181 gctatgccag tatcgccacc gcggtagagg ccattaagct aggcgcgacc cattacctca
      241 cgaaacccgc cgatgccgac gagatcgttg ccgcatttga acgcgaacac ggtgatcctg
      301 cggtgcccgt gacctctcaa acactctccg tcaaccggct ggagtgggaa catattcagc
      361 gggtcttgac cgaatgcggg ggcaatgtct cggcggcggc ccggcagcta ggcatgcacc
      421 ggcgcacctt acagcgaaag ctcaataaat atccagtgcg acgttaactg ctccacgatg
      481 aaactcgagt tcgatagtgg cactgcgctc tacacgatcc gcgcctatag gcccggcgcc
      541 attgtggtca acgatgaaat actcactcgg agttttattc tcttgcccga tcgcttgatc
      601 cgcgattggg agccgcaaac ctttgaacaa gtcgctcgcc ggcatttcga cgagattgca
      661 aacctggcgc cggagatcgt gttattcggc accggcactc gcctatggtt ccctgcccct
      721 gaattaaccg tagctttact gcgcaaaaat attgggttag aaacaatgga caccgcagcg
      781 gcttgccgga gctacagtat attgatgtct gagggccggc gggtagctgc cgccttgctt
      841 atgataagtg cctaaacctc tttaaaaagg gcatcgccgg aataaccctc ctgctgcaag
      901 atccagcgca aacgtttgag ggcctcgagc tggatttgac gcacccgctc gcgggtcaca
      961 cccaattcgt ttccgagctc ttcgagggtg gctgcctccc gcccatcaag tccaaaacgc
     1021 cgcgctacca cggcgcgttg cttgtcatcg agttgtgaca accaggtctc aatgtgctcc
     1081 tgtacgtcgg tatcctgtaa caataccgcg gggtcgatgt tttgctcatc agggatggtc
     1141 tcgatcaggc tccgatccga atcgggctct acgggcatat cgacggaggt tacccggtca
     1201 tataagctct gcatccagcg gacatagccc gaagaccaat tgagcgcatg ggcgacctcc
     1261 tgataattcg gttcgcgccc taaggtttgg gtaagtttac ggacggtgcg cgaatagccg
     1321 tgcacatcct tgaccacatg gatagggagg cggatcgtac gggtctgatt catcaatgcc
     1381 cgttcgatgg tttggcgtat ccaccaggtg gcataggtcg aaaaacgaaa acccttttcc
     1441 ggatcgaatt tttcgacggc gcggatcagc cccagatttc cctcttcaat cagatcgagc
     1501 agggcaagac cgcgattggt atagcgtctg gcaatcttca ccaccagacg caggttgctt
     1561 tcgatcatgc gccggcggga tttttgatcg gactgatggg ccgcacgggc gagcgctacc
     1621 tcctcctgag cggtgagcaa aggcgaaata ccgatctcgc tcaggtatag acgggtggta
     1681 tccacttcgc tctcaagaac gtcttctttt gaccattgag cttcctgagc aatgaggcgg
     1741 ggcaaatcgt tcagtaatac gtcgtccttc tcagcctcct caaataaaga caactcaatc
     1801 ttgaggccct cttcctcact actgttaaag atctcgtcct catcctgctc gtcggccata
     1861 gtcattctcc taataccgtg cgtggagcgg atcacctacc ttaaacccga cagatctaga
     1921 gtgcgtttag gcag
//
LOCUS       DASQSL010001278         1014 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_89887, whole genome shotgun sequence.
ACCESSION   DASQSL010001278 DASQSL010000000
VERSION     DASQSL010001278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89887"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..643)
                     /locus_tag="VE844_13185"
     CDS             complement(<1..643)
                     /locus_tag="VE844_13185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02261.1"
                     /translation="MVQTKGTQASGARKAANHYIIRFVPYLSILLPFGISLFYVHLFG
                     VNVFFSDEWELVGYLRRFHTGTLGVVDLFEHHNEHVYFFPWIVMLLLGTLTEYNTIPL
                     MYLVQICLLFTSIILLLAFGSTVRKTSPLMVLFVPIPLLVFSFRQYENMLWGNQITFA
                     FAQMFSVLTLFLLQALQTESSKRAVFFPVALVSATIASFSAVQGLLVWPAGLLQ"
BASE COUNT          256 a          273 c          294 g          191 t
ORIGIN      
        1 gttgcaggag tcctgcgggc cacaccagga ggccctgcac cgcagagaag gaggcgatcg
       61 tggcactcac cagagcaacc ggaaagaaga ccgccctttt cgagctctct gtttgtaacg
      121 cctggagtaa gaagagcgta aggaccgaga acatctgcgc gaaagcgaaa gtgatctggt
      181 tcccccacag catgttctcg tactgcctga agctgaacac caggagagga atagggacga
      241 aaaggaccat caaggggcta gtcttgcgta cggtactacc gaaggccaat aggagtatga
      301 tcgacgtaaa caggaggcat atttgcacga ggtacatcaa gggtatggtg ttgtactccg
      361 tcagggtgcc caacagcagc atcacgatcc aagggaagaa gtacacgtgt tcgttgtggt
      421 gttcgaaaag gtccacgaca cctagcgtgc cagtatggaa cctccgcaaa taccccacta
      481 gctcccattc gtcggagaaa aagacgttaa caccaaacag gtgcacatag aacagggaaa
      541 tgccgaaagg caacaggatc gagaggtagg gaacgaacct gattatataa tggttggccg
      601 ctttccgagc ccccgacgcc tgagtgcctt tcgtttggac cactaccttg tcctaactgg
      661 gtaacgaggt ctttagcaag cgagtatggt cgcacattcg aagcggtgtg acaatcgcgc
      721 cgaggtttca ttgcctggct cgcggtgtcc gaggctgacg aaggacggtt acgagggatg
      781 agagaagata ttaacgccga tgagagtgct taggctctgt tcggtctttg agccgcccct
      841 ttccgccgtc gcgggaaaag gggccaaatt cgatccgata ggggcatgca gaaccacacc
      901 gccgagctga cctgggccct cgaccgccgc agcgtcatcc agacggtgct gaccacccgc
      961 ccgctcaccg ctcccctctt ttcgctggac cgggtaacga cgagcatatc cgct
//
LOCUS       DASQSL010001279         1716 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_63231, whole genome shotgun sequence.
ACCESSION   DASQSL010001279 DASQSL010000000
VERSION     DASQSL010001279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1716)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1716)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1716
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63231"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(8..1213)
                     /locus_tag="VE844_13190"
     CDS             complement(8..1213)
                     /locus_tag="VE844_13190"
                     /inference="COORDINATES: protein motif:HMM:NF033538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HZC02262.1"
                     /translation="MDHVSTESQSHLEVADILRHFGPSYVQTHSVSPFEQRLIEDLMT
                     CRTARLGGHLEHCLACGFERHAYNSCRHRHCPKCQTVTKMRWIEARGAELLPTPYFHT
                     VFTLPHEVNPLVLANKRLLLGLLFQSASETLLDFGKRRLGGQLGAIMILHTWDQLLKP
                     HFHVHALVPGGALGHQGQTWNPTKATYLFPVKALSTVFRAKFRDGLKALYAKQALRST
                     EATLDLEAPRAFKRFVKRLCQKKWVVYAKPPFGGPEQTLSYLGRYTHRVAISNHRLLD
                     LQGDQIRFTCRNRQHGDRSEITQLHAHTFIKRFLMHVLPSGFVRIRHYGVLANRCKAT
                     TLPLCRQALGQVATPPPEPKSVAQWMQQWTGIDITRCPQCGHQPLERIPVSAALGTSR
                     NRAPPAPTF"
     gene            1585..>1716
                     /locus_tag="VE844_13195"
     CDS             1585..>1716
                     /locus_tag="VE844_13195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009277700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZC02263.1"
                     /translation="MALIGYARVSTHEQHLHLQQDALSNAGCLKIFTDTISGAKSERK
                     "
BASE COUNT          392 a          439 c          522 g          363 t
ORIGIN      
        1 gggcgcctta gaaagtcggt gccggtggag cccgatttcg gctcgtgccc agtgccgctg
       61 acacggggat acgctcaagg ggctgatgac cacactgagg acagcgcgtg atgtcgatac
      121 ccgtccactg ctgcatccac tgcgccacgc tttttggctc aggaggtggt gttgccactt
      181 ggcccagggc ctggcggcac aagggcaagg tggtggcttt gcagcggtta gccagcacgc
      241 cgtaatgacg gatgcgaacg aagcccgagg gcagaacatg catcaagaaa cgcttgatga
      301 aggtgtgggc atggagctgt gtgatttctg aacgatctcc atgctgccgg ttacgacagg
      361 taaaacgaat ctgatcgcct tgcaggtcca aaagacgatg gttggaaatg gccacccggt
      421 gggtatagcg gcccagatag cttaaggttt gctcagggcc gccaaagggg ggcttggcgt
      481 agaccaccca cttcttttgg cacagtcgct tgacgaaccg cttgaaggca cggggtgcct
      541 cgaggtctaa ggtggcctct gtggagcgca gtgcttgctt ggcgtagagc gcttttaagc
      601 cgtcgcgaaa tttagcccga aagaccgtgc tcaaggcttt gacgggaaag aggtaggtgg
      661 ccttggtggg gttccaggtc tggccctgat ggcccagtgc accgccaggg accagggcat
      721 gcacgtggaa atggggcttc agcaactggt cccaggtatg caggatcatg atggcaccga
      781 gttggccacc caggcgacgc ttgccaaagt cgagtagcgt ctcactggca ctttgaaaga
      841 gcagaccaag taagaggcgt ttattggcta acaccagcgg gttgacctca tgcggcaagg
      901 tgaacacggt gtgaaaatag ggggtgggta gaagctcagc gcctctggcc tcgatccagc
      961 gcattttggt gacggtttga catttgggac aatgccgatg gcgacacgag ttgtaagcgt
     1021 gacgctcaaa gccacacgcc aagcagtgtt caaggtgacc gcctagacgt gccgtacgac
     1081 acgtcatgag atcctcgatg aggcgttgct caaagggcga taccgagtgg gtctggacat
     1141 agcttgggcc gaagtggcgc aagatgtccg cgacttcgag atggctttgg ctctcagtag
     1201 acacatgatc catgtgagcc tcacaaggcg ttggcctcac tgccatcgtg gctcctttgc
     1261 ctgtgaacgc atgagacaag atcggcgtcc gcgatggacg ctcgtttgga gccactgtat
     1321 cgcagtatgg actcagacga atgcggaatc tgcgggatcg gttggcatta atagtgatga
     1381 tcacgttgtg ggagatggat ggtgtgacga cgaccaaggc aggacaagcc accctttagc
     1441 ggtttagttc aacctccctt ttctagacag tccgcaaacg gaatgacaat tttcagattt
     1501 acggctgatt cactgtccat ttatccgtct acaaatcaac gtccacatat tgcactatcc
     1561 aatgagtttt gagacaatga cgctatggca ctcatcggat acgcccgggt ctcaactcat
     1621 gaacagcatc tccacctcca acaggacgcg ctcagtaatg ccggctgtct caaaatcttc
     1681 actgacacca taagcggcgc aaaatcagag cgcaag
//
LOCUS       DASQSL010001280         1137 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_89894, whole genome shotgun sequence.
ACCESSION   DASQSL010001280 DASQSL010000000
VERSION     DASQSL010001280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1137)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1137)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1137
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89894"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(97..1059)
                     /locus_tag="VE844_13200"
     CDS             complement(97..1059)
                     /locus_tag="VE844_13200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020408073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HZC02264.1"
                     /translation="MTTTALSSDEEIYHLLEPRVGQLHLKRRLGLESDREARIFGRGL
                     NFFDLENWYSVHALIRYALRLTFLYRRAKRNALNIQVRYHEVRIPRLPSAFEGFTIMQ
                     LSDLHLDMNEEFPPALIERVRNLEYDLCVITGDFRYQTFGPCEPALSRMERVRPYLKD
                     PVYGVLGNHDSIRMVPAFERMGIRILLNESVTVTRNKGSLHLVGVDDPHYYRLDNLDR
                     ACQGINHNNVSILLAHTPEFYKHAAHAGFDLMLCGHTHGGQICLPGGKPIIYDAKCPR
                     ALAAGSWRHHQLIGYTSVGTGSSIVDVRLNCLPEITLHRLHRAT"
BASE COUNT          254 a          307 c          331 g          245 t
ORIGIN      
        1 tggtcctgat cgtggccttg tttttctcgc tcgaggtgat cctttcgccg ctcttgtttc
       61 tgctcaacat ccgcaagcgg ccgtattgaa caccgcttac gtggcccggt gcaatcggtg
      121 caaggtgatc tcaggcaggc aattgagccg cacatcgacg atggatgaac ctgtacctac
      181 cgaggtgtag ccgatcagct gatggtgcct ccaagaccct gcggccaaag cccgcggaca
      241 cttggcgtca tagatgatcg gtttgccccc cggcaggcag atctgcccac catgggtatg
      301 gccacagagc atcagatcaa aaccggcatg ggctgcatgc ttgtaaaact ccggggtatg
      361 ggcgagcagg atcgaaacat tgttgtgatt gatcccctgg caggcacgat ccagattatc
      421 gagccggtag taatgtggat catcgacgcc cacgagatga agagatccct tgttccgagt
      481 gacagtgacc gattcattga gcaatatccg gatccccatc cgctcgaatg ccgggaccat
      541 cctgatggaa tcgtgattgc cgagcacacc gtagaccgga tccttgagat agggccggac
      601 gcgctccatg cgcgacagcg ctggctcaca agggccaaag gtctggtacc ggaaatcccc
      661 ggtgatcacg catagatcgt attcgaggtt gcggactcgc tcgatcaagg caggcggaaa
      721 ctcctcgttc atgtccagat gcaagtcgct caattgcatg atcgtgaatc cctcaaaggc
      781 actgggcaat cgggggatcc ggacctcgtg atagcgcact tgaatattga gcgcattgcg
      841 ctttgcccgg cgatagagaa aggtgagccg cagggcataa cggatgagcg cgtgtactga
      901 ataccagttt tccagatcga agaaattaag ccctcgaccg aatatacggg cctcgcgatc
      961 agactccagg ccgagccgtc gcttaagatg cagctgcccg acacggggtt cgagcaggtg
     1021 gtagatttcc tcgtcgcttg acagggccgt tgtggtcatc gatgcggaat tcgagatcga
     1081 tcgggataaa agcgctgcgc ttctacctca agcggatgag tctgtgagag ttttcgt
//
LOCUS       DASQSL010001281         1001 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_131591, whole genome shotgun sequence.
ACCESSION   DASQSL010001281 DASQSL010000000
VERSION     DASQSL010001281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131591"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(155..439)
                     /locus_tag="VE844_13205"
     CDS             complement(155..439)
                     /locus_tag="VE844_13205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003297153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug transporter"
                     /protein_id="HZC02265.1"
                     /translation="MQSIPSAAEHPIPQERSYQAPSAEAMALDGLIYRPVLLAATVIG
                     AATFLVTLPISALGGNVDEAAERLVAEPARAMTECLGCLPGQYAASGYSD"
BASE COUNT          238 a          286 c          244 g          233 t
ORIGIN      
        1 tgacaggtga aacaattaaa caccagcgct tctgacagac cccctccttc tgcacctgga
       61 gccagcatcg gtagggatcc aagtacattc aaaaggagtg aggctatcaa cctacggctc
      121 atcatcaatg agtattcacc acccggcgtt attgtcagtc actgtacccg gaggcggcgt
      181 attggccggg taaacatccc aggcactcgg tcatggctcg agcgggctcc gctactaatc
      241 tctccgcggc ctcatcgaca tttccaccca gggcactgat cggcaatgtc accagaaagg
      301 tagcggcacc gatcacagta gccgccagca acacgggccg atatatcaat ccatcgaggg
      361 ccatcgcttc ggcagaaggg gcctgatagc tgcgttcttg aggaatagga tgctctgctg
      421 cggaagggat tgattgcatc ctgggatcat cggccaaagc tgggcgctgc gccaaaatag
      481 agacgttgat cagcgccgcg attgccatat aactcatgaa ctggcggata aacgatttta
      541 ctttcatata acctcctgtt gagatagtta ccataattgt aaaccatcag atccaccgtg
      601 cttgcacgtg gatccgacag ctgtttcttc ccctcatcca catccctgtt gttcgtttaa
      661 ttcaattcta gctctaaaac gagctcgcgg acagtctaaa gcggccataa acccattgcg
      721 ccccgggcca gcaaagaggt atggttttta acacatccat cggtagtttc ctccgcttag
      781 tcgaataggc cgtttgttca ttcaatgcca tgatttgagc tcatcaaagt aatatcggcc
      841 tcgcacccaa aagagtttat gcctcgtttt gagttcgcaa gtaatgcccc gctcggagtt
      901 gtgtacctcg cggggacgct cgccgggctg gctgcccccg cctttgccga cgagcccgtg
      961 caactggaaa ccattgaggt catcgaacgc tccgatacgc t
//
LOCUS       DASQSL010001282         1694 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_11086, whole genome shotgun sequence.
ACCESSION   DASQSL010001282 DASQSL010000000
VERSION     DASQSL010001282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1694
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11086"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            472..1614
                     /locus_tag="VE844_13210"
     CDS             472..1614
                     /locus_tag="VE844_13210"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020159832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HZC02266.1"
                     /translation="MEQTSYDSSRNLEFMTLFLCGDVMTGRGIDQVLPYHNNPRLYEP
                     YVTTARRYVELAEQMNGPIPAPVDFAYVWGDALAEFQRIALDVRIINLETAVTVSEDH
                     WKAKGIHYRMHPANIPCFKAARIDCCVLANNHVLDWSHKGLVETLQVLEKANMRTAGA
                     GPSLEAAQMPAVVEVSGKGKVLVFAFGCESSGIPPNWAAAEKGPGVNLLQDLSPKTVQ
                     RIADQVRMVKRAKDVVVASIHWGSNWGYGIPREQQVFAHQLIDEADVDVVHGHSSHHP
                     KGIEVYKDKPILYGCGDFLNDYEGISGYEEFRDDLVLMYFVTLSPLSGKLARLEMIPM
                     QIKRFRLNRPSVADIRWLQSTLDRESRKLGAAVELTEENHLRLRWE"
BASE COUNT          371 a          454 c          505 g          364 t
ORIGIN      
        1 aagaagggca gtcggtgcct gtaggcgtgg gccagcccac gctcaggatt gatgggctga
       61 cggtaggagg gacaaccctg tgaacctcct gaagctattc tgccgctgag agacatgtac
      121 cgccagaccc tactccgcta gaaagctggc cgtttcctcc cggtgcgcct cggcatcttc
      181 ctgccccaat tcgatcagcc gcttcaggca tgtttgaaga agcctttagc atcgttcgga
      241 gaaagagttt gtaaagcgtg agcaatcgcc tctgagacgc gcttccacag tgcgcgcttg
      301 ggctttgcgc aggaactgct taacaaggcc agcaagatta agaagtatgc tctgttgaac
      361 gatctaataa ctacgagacg ggatttcctg aagctctcag gcatagccgc cctggaggta
      421 ctgaccgccg gacagcttgc ccggcctgtc tcggctagaa gttctatgcc catggagcag
      481 acaagctacg attcgtcccg aaatctagag ttcatgacct tgttcctctg cggcgatgtg
      541 atgaccggca ggggtatcga tcaggtcctg ccttatcata acaacccacg cctctatgag
      601 ccttatgtga ccaccgcccg gcggtatgtg gagctcgccg agcagatgaa tggaccgatc
      661 cctgcgccgg tagatttcgc ctacgtgtgg ggggatgctt tggctgaatt ccagcgcatt
      721 gcactggatg tgcggatcat caatctcgag acggcggtga ctgtgagtga ggatcactgg
      781 aaggccaagg gcatccacta ccgaatgcac ccggcaaata ttccctgctt taaagcggcg
      841 cggatcgatt gctgtgtgct agccaacaac catgttctgg actggagtca caagggactt
      901 gtcgagacct tgcaggtgct ggagaaggcc aatatgagga ccgccggggc cggtccgagc
      961 cttgaagcgg cgcagatgcc cgcagtggta gaggtgagtg ggaaagggaa ggtcctcgtg
     1021 ttcgcgttcg gttgcgaaag cagcggcata ccgcccaact gggctgcggc ggaaaagggg
     1081 cctggggtga atctgcttca ggatctctca cccaagaccg tgcagagaat cgcagaccag
     1141 gtacggatgg tcaagcgagc caaggatgtc gttgtggcct ccatccactg gggcagtaat
     1201 tggggctatg gcattccccg cgagcagcag gtgtttgcgc accagcttat tgatgaggcc
     1261 gacgtggatg tggtacacgg ccattcctct caccatccca agggcatcga ggtgtacaag
     1321 gacaaaccta tactttacgg gtgtggcgat ttcctcaacg actacgaggg catcagtggc
     1381 tatgaggagt ttcgtgacga cctggtgctc atgtacttcg tcaccctaag ccccttaagc
     1441 gggaagcttg ctcgcctcga gatgatacct atgcagatca agcgcttcag attaaatcgt
     1501 ccgtcggtcg ccgatattcg ctggcttcag agcacccttg accgggaaag cagaaagctc
     1561 ggtgccgcgg tggagctaac cgaggagaat cacttgaggt tacgttggga atgagggccg
     1621 gctttttcat gtgaaaaaag ctagcggtgc cccggccaag cttccgcact cactttttac
     1681 tccgtatcca gccg
//
LOCUS       DASQSL010001283         1417 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_159507, whole genome shotgun sequence.
ACCESSION   DASQSL010001283 DASQSL010000000
VERSION     DASQSL010001283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1417
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159507"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..174
                     /gene="rpmE"
                     /locus_tag="VE844_13215"
     CDS             <1..174
                     /gene="rpmE"
                     /locus_tag="VE844_13215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016520528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HZC02267.1"
                     /translation="VCACGEVVHTRSTRPQIRVEICSKCHPFYTGKQKLVDTAGRVEK
                     FQKKYGLNKGSQN"
     gene            202..1290
                     /gene="prfA"
                     /locus_tag="VE844_13220"
     CDS             202..1290
                     /gene="prfA"
                     /locus_tag="VE844_13220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018086285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HZC02268.1"
                     /translation="MWDKLEALEQRFAELNDLMSRPEILGKAAEYQRYARERAELAKI
                     VDVYQRFKRVTQEKTGVQRLLEDAGDDEEMTQLGHDELAQLQEQEEKLTFELKTLLLP
                     ADADDQKSVIVEIRAGTGGEEAALFAADLFRMYTKYSERQGWRVEIMDSHPTGIGGFK
                     EIVASVEGRGVYSLLKYESGTHRVQRVPVTESQGRIHTSAVTVAILPEAEEVEVQINP
                     EELRIDVFRSSGPGGQSVNTTDSAVRVTHLPTGIVVSCQDEKSQHKNRAKALRVLRAR
                     LLDVAKQEQQDKISRERRSQIGSGDRSERIRTYNFPQGRVTDHRINITLYKLGVVLEG
                     EIDELIEALRQADQAEKLKDFEKSDVHA"
BASE COUNT          321 a          376 c          462 g          258 t
ORIGIN      
        1 gtatgcgcct gtggcgaggt cgtccatacc cgctcgacgc ggccgcagat ccgcgtcgag
       61 atctgctcga aatgccatcc cttttacacg ggcaagcaga agctcgtgga taccgccggg
      121 cgtgtggaaa aattccagaa gaaatatggt ctgaacaagg gctcacaaaa ctagggtcgg
      181 tgaccagcta ggggactcgc gatgtgggat aaattagagg ccctggagca gcgcttcgcc
      241 gaactcaatg acctcatgag tcgcccggag atcttgggta aagcggctga ataccaaagg
      301 tatgcgcgag agcgggcaga gcttgccaaa atcgtcgacg tctaccaacg gttcaagcgg
      361 gtgacccagg aaaagaccgg ggtccagcgc ctcttggagg atgctggcga tgacgaggag
      421 atgactcagc tcgggcacga tgaattagcc cagctgcagg agcaggagga gaagctgacg
      481 ttcgagctga aaaccctcct gctgccggca gatgccgacg accagaagag cgtcatcgtg
      541 gagatccgcg ccggcaccgg tggcgaggaa gcggcgctgt ttgctgcgga cctgttccgt
      601 atgtatacca agtactccga gcgccaggga tggcgtgtgg agatcatgga cagtcacccc
      661 accggcatcg ggggcttcaa ggaaattgtt gcctcggtgg aaggtagggg ggtgtacagc
      721 cttctcaaat acgagagtgg cacccatcgt gtccagcgtg tcccagtgac cgagtcgcag
      781 gggcgcattc atacctcggc ggtgacggta gcgatcctgc cagaggctga agaggtcgag
      841 gtgcagatca atcctgagga attgcgcatc gacgtcttcc gttcttcggg gcccggcggt
      901 cagagcgtca ataccaccga ttcggccgtc cgcgtcacgc acctgccgac aggcatcgtg
      961 gtcagttgtc aggacgagaa atcgcagcac aagaatcggg ccaaagcgct gcgtgtgctg
     1021 cgcgcccgtc tgctggatgt tgccaaacag gagcagcagg acaagatctc acgtgaacgt
     1081 cggtcgcaga ttggcagtgg tgaccggagc gagcgcatcc gcacctataa ttttccgcag
     1141 ggccgtgtca cagaccatcg cattaacata acgctctata agcttggggt ggtgctggag
     1201 ggagaaatcg acgagttgat cgaggccctc agacaggcgg accaagccga gaagctgaaa
     1261 gattttgaga agagcgacgt ccacgcatga gcgtcacagc cgcagagtcc tggcggtggg
     1321 gaacagcgtt tctccaatcc cgccagattg atagcgcgcg tctggacgct gaagtcttgt
     1381 tggggttttg cctgcaacgt gagcggtcgg cgctgta
//
LOCUS       DASQSL010001284         1128 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_63264, whole genome shotgun sequence.
ACCESSION   DASQSL010001284 DASQSL010000000
VERSION     DASQSL010001284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63264"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(160..948)
                     /locus_tag="VE844_13225"
     CDS             complement(160..948)
                     /locus_tag="VE844_13225"
                     /inference="COORDINATES: protein motif:HMM:NF015100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit D"
                     /protein_id="HZC02269.1"
                     /translation="MLGALLIYGLWVLDLEVEIAFAAAIIATALATQYAFTVGVKLPA
                     FDPKSALISALSLCLLLRTDSMLIAALAAVLAIASKFIIRFRGKHIFNPTNFALVSLL
                     LGTDQVWVSPGQWGQTAFLAFLIACLGLLVVNRAKRADVTLAFLGFYLALLFGRAGWL
                     GDPLLIPWHQVQNGAFLLFCFFMISDPKTLPDARRGRIIFAGLAALGAAFVQFGLYRP
                     NGLLYALAACAPLMPLLDWFFPASRYAWEAPSLGQGPMNANVKA"
BASE COUNT          313 a          298 c          318 g          199 t
ORIGIN      
        1 gcgaatatta tgagtatggc ttatgttgga tgaaagcaca agaaaacccg accagaaaat
       61 cagcgcgcga ttgctagtac agcgattgct aaaaagctgg aggtgctcgc cggccggtgg
      121 aacaccagga ccgccaccag ccgcccttag tccggaagat tatgccttga catttgcatt
      181 cattgggcct tgtccaaggc ttggcgcttc ccaagcatag cggctcgccg gaaagaacca
      241 atccagcagc ggcatgagcg gtgcacaggc ggccaatgcg taaagtaagc cgttgggccg
      301 atacaggcca aattgtacaa atgctgctcc aagggccgcc aatccagcga agatgattcg
      361 gcccctacgg gcatcgggaa gggtctttgg atcggagatc ataaaaaagc aaaacagcag
      421 aaacgcgccg ttttgcacct gatgccaggg gatgagcagg gggtccccaa gccacccagc
      481 ccggccaaag aggagcgcca gataaaagcc caggaaggcg agggtgacat ccgcacgttt
      541 ggcgcgattg accactaaca ggccaagaca tgcgatcaaa aaggccaaga aggccgtctg
      601 tccccattgc cctggagaga cccatacctg gtcggtgcct aacaataggc tcaccaaggc
      661 gaaattagtc ggattgaaga tatgcttgcc gcggaaacgg ataatgaatt tactcgcaat
      721 tgcaagcacc gcggccaagg cggcaataag catcgaatcc gtgcgtaata acaggcacag
      781 cgataaggcc gagatcaagg cgcttttggg gtcgaaggcg ggcagtttta cccccactgt
      841 gaaggcgtac tgggtagcca gtgccgtggc gatgatggcc gctgcaaagg cgatctcgac
      901 ctcaagatcg agcacccaaa gaccgtagat aaggagggcg ccgagcatgc cgatctgata
      961 aagtcttgga tcccttgtcc gataattaaa gatcatccct ataatggtaa cattaaagcc
     1021 ttgccaaggt gactgaatga gcacaagcaa agacagccca tcctcgggat caccacccgt
     1081 atggcttgag cactatccca agggtgtgcc ggctgagatc aatccgca
//
LOCUS       DASQSL010001285         1343 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_63276, whole genome shotgun sequence.
ACCESSION   DASQSL010001285 DASQSL010000000
VERSION     DASQSL010001285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1343
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63276"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            173..418
                     /locus_tag="VE844_13230"
     CDS             173..418
                     /locus_tag="VE844_13230"
                     /inference="COORDINATES: protein motif:HMM:NF024908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC02270.1"
                     /translation="MLTITNTTATREQVWMAFRQAHHVRLRERYHCILLLMDGKSCSE
                     IAQWLYRDEDTIRGWVHAFNQSGLQGLEREPIPGRPA"
     gene            485..1343
                     /locus_tag="VE844_13235"
                     /pseudo
     CDS             485..1343
                     /locus_tag="VE844_13235"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
BASE COUNT          274 a          373 c          419 g          277 t
ORIGIN      
        1 ataattgtca ttttgtataa cacggtgcta gcccttgtca aggacaatat tccaagtact
       61 taaagtgtaa aaatgcctcc cttgacctct acagtaatcc aacaaaataa tcccggtttt
      121 tcaggccctg cggtacaacg gtgcaaaaag tagggatagg gagggcctga gcatgttgac
      181 gatcacgaac accaccgcca cacgagagca agtgtggatg gcctttcgtc aggcgcacca
      241 tgtgcggctg cgcgagcggt atcactgcat tttgttgctg atggatggca agagctgttc
      301 tgagattgcg cagtggctgt atcgggacga ggacacgatt cgaggctggg tacacgcctt
      361 caaccagagt gggctccagg ggctggagcg cgagccgatc cccgggcgtc ccgcctgact
      421 caccccggca caacggacgc aggtcaaaga ggcggtccgc cgctgtcccc gggaggcggg
      481 ttataacatg agcctgtgga cgacgaaact ggtccgacac tttatctcta cccgttttgg
      541 catcgagtat tgccgggagc gggtccgccg ggtgctgcac gagctgggct ttcgcctgcg
      601 ccgcttgcgg cactgccatc tgaaggccaa ggtggaggag caggaggcct tcgtggccga
      661 actggaggag ttgcttgtcg agtggccggc ggattgggag ttgatctttg tggatgaggc
      721 gaccgtgcgc cgccatccca cgttgaccgc ccagtggtgc ttggtcgatg aggtgcctga
      781 ggtgcccacg ggggatgacc atgccaaggt gcatgtcgat ggcgccgtgg ccccgctgac
      841 cggacggacc cactaccata tcagccccgc attgggtaag ggggagtttg cgcgattcct
      901 gcagcacttg atggtctatt atccaggcaa acggctgctg gtgattcatg accgtggcga
      961 gcaacataaa ggggctcccg tagacgccgt cgttcgggag gctcaggggc ggctcgtact
     1021 caaggcccag cccgcatact cgccggaact gaatccccaa gagcggattt ggaaatggtt
     1081 gcggcgtgtc gtgacccaca atcactggtt tgccactctc acagagcaga tcgaagccat
     1141 ccggaatttc ttccgatacc tggctggggt cagagatcag gtgcgccatc tatgcggctt
     1201 caaaaccccg gaatctttag ttgcatcact gaaggatggc gggttcatta cccccacgcc
     1261 gcatatcgat ccgcttcaga cggggcgcgt cactgtcggg atgcatgtcg gcgcgctcac
     1321 ccgacggctc aaacgcggtc gta
//
LOCUS       DASQSL010001286         1254 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_77521, whole genome shotgun sequence.
ACCESSION   DASQSL010001286 DASQSL010000000
VERSION     DASQSL010001286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77521"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(104..580)
                     /locus_tag="VE844_13240"
     CDS             complement(104..580)
                     /locus_tag="VE844_13240"
                     /inference="COORDINATES: protein motif:HMM:NF039957.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6010 family protein"
                     /protein_id="HZC02271.1"
                     /translation="MPEPNPALIIPVLINGAIFATVAVIVPAFLLSRFTRDIIGRSVL
                     VNFLFIAAGAYFGFATLGREVVDTQPIWMLVELAQVIVFGTLALLGLRGSPYWIAAGW
                     VLHPFWDVVIHYIGPGASFTPWTYAIACISFDWLVAVYIVVAYGLGLVGARRSAVA"
     gene            complement(848..>1254)
                     /locus_tag="VE844_13245"
     CDS             complement(848..>1254)
                     /locus_tag="VE844_13245"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZC02272.1"
                     /translation="EVRQASEQFYAALNSTLNGDSGPMEEIWSHSSDVSAMHPFGGRM
                     LGWEEVRASWEQAAQAFSGGQVALDEMVVVPIADDAAYTLGTEHGQGSVGDQTLRIDW
                     RVTNIYRREAGGWKIVHHHTDFSSEVAEALGM"
BASE COUNT          296 a          386 c          314 g          258 t
ORIGIN      
        1 ggcctgtagg cgctgcgaac gcgcgtgcaa cgaggcgctc tccgccgttg gtgcataaga
       61 acaaacgctt gagccattgg aggcgctttg cttaaagagc gtcctatgcg accgccgacc
      121 tgcgtgcgcc gaccagtcca agtccgtagg cgacgacgat atagacggca accagccaat
      181 cgaaactaat acacgcgata gcgtaggtcc aaggagtaaa tgaggctccc ggccctatgt
      241 aatgaatcac aacgtcccag aagggatgca atacccatcc tgcggcaatc cagtacgggg
      301 agccgcgcag accgagcaag gccagggtgc caaaaacaat aacctgtgcc aactcgacca
      361 gcatccaaat cggttgcgta tctactactt ccctccccag agtggcaaat ccgaagtacg
      421 ccccagccgc aataaataag aagttgacga gtacagaacg cccgatgata tctctagtga
      481 agcgggatag taaaaatgcg gggactatca ccgctactgt agcgaaaatg gcaccgttta
      541 ttagcacggg gattatcaac gcaggattag gctcaggcat aactcctcag cacgctcctt
      601 caatatagtc ggtttctgtt acagccctgc cggcatttta tgaacacccg tgcttgattc
      661 aaaattacaa gccgttgcaa tcctctccac caaaggcatg atgccagcta ccgttgaccg
      721 gcactatcta tcttggcgaa cttccgagaa ttccttactt ccacgtcgtt cggtgaataa
      781 gggcaagaag aagggccgag gttgctacta gccccggccc tcgacaactc ccttcttggc
      841 cctcctccta catgccgagg gcttccgcca cctctgagga gaagtcggtg tggtggtgca
      901 ctatcttcca tcctccagct tcacgacggt agatgttcgt tacacgccag tcgatgcgta
      961 atgtctggtc tccgacgctt ccctggccat gctcggtgcc caaggtgtag gctgcatcat
     1021 cagctatggg aaccacgacc atctcatcca gcgccacttg cccaccagag aacgcttggg
     1081 cggcctgctc ccaggaagct ctcacctcct cccatccgag catcctaccc ccgaacgggt
     1141 gcatggcgct cacgtccgag ctgtgcgacc agatctcctc catcggccca ctatcaccat
     1201 tgagcgtgct gtttagggcc gcgtagaatt gctctgaggc ctgccggacc tcat
//
LOCUS       DASQSL010001287         1099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_169642, whole genome shotgun sequence.
ACCESSION   DASQSL010001287 DASQSL010000000
VERSION     DASQSL010001287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169642"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            304..750
                     /locus_tag="VE844_13250"
     CDS             304..750
                     /locus_tag="VE844_13250"
                     /inference="COORDINATES: protein motif:HMM:NF014439.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02273.1"
                     /translation="MFAGEFRCKVDDKGRFFIPSSIRELLDKGKPDQTKSVMFVRGQT
                     ECLWLYALQDWEHKLAHARETLDDDQSRLFMHFIVSETTASEIDRSGRICVPRRLREL
                     SSIEDEIVVIGMYDRLEVWSLEEWNSYLARMEEKYETSLNKILNVL"
     gene            936..>1099
                     /locus_tag="VE844_13255"
     CDS             936..>1099
                     /locus_tag="VE844_13255"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014560636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HZC02274.1"
                     /translation="MLKGRLREGLTFDDVLLIPAKSEVLPSQVDVSTFLTPQIGMSIP
                     LISAAMDTVT"
BASE COUNT          253 a          303 c          319 g          224 t
ORIGIN      
        1 gcgagcgatg ctgctggcat tctcacacac agctcctcgg aagtcaagaa gacgagccct
       61 agcacgacag ctcaaggctt taaaggacgc ccagcctcac cggggaaatg ccggcagatt
      121 ttgccgtcgc acacaagcat acctctcgga tatgcgttat attaatacgg cagttggttc
      181 gcaacccata ccttcgacgc tcccgatgcc tgctctgggc tgtggcggtc ctggtaagca
      241 ccccatgtgc acccggctct agcacacggt gcctgttgga aagcgatgag gaggtgagcg
      301 cgcgtgttcg caggcgagtt ccggtgtaag gtggatgaca aggggcgttt cttcatccct
      361 tcatccattc gcgagctgtt ggataaaggc aagccggacc agaccaagag tgtgatgttc
      421 gtgcgtgggc aaaccgaatg tttgtggctc tatgccctgc aagactggga gcacaaactg
      481 gcgcacgcta gagagaccct cgacgacgat cagagccgtt tgttcatgca tttcattgtc
      541 tctgagacca cggcatcgga gatcgatcgg tccggccgca tttgcgtgcc gcggcgcctg
      601 cgtgaactgt ccagcatcga agacgagatc gtggtgatag gcatgtacga tcggctggag
      661 gtctggagcc tggaggaatg gaatagctac ctcgcccgca tggaagagaa gtacgaaacc
      721 tcgctcaaca aaattctcaa cgtactgtag cgggcgccat gggtccacct tcagccctcg
      781 ggaaatgctg tcgacaggta aggaacaccc aagacaagga aggcatcaag gcctgaggca
      841 tcacggcatc gggaaggcag agcacaaacg gcgctggctc gatgctccga tgcccgaggc
      901 ccttgatgcc tttctcgctt cagggagatt tgaccatgtt gaagggtcga ttacgggaag
      961 gcttaacgtt cgatgatgtg ctgctcattc cggcaaaatc cgaagtactc ccttcccaag
     1021 tagacgtaag caccttctta accccccaga tcggcatgag tattccgctc atcagcgccg
     1081 ccatggatac ggtgacgga
//
LOCUS       DASQSL010001288         2787 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_34178, whole genome shotgun sequence.
ACCESSION   DASQSL010001288 DASQSL010000000
VERSION     DASQSL010001288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2787
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34178"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            185..505
                     /locus_tag="VE844_13260"
     CDS             185..505
                     /locus_tag="VE844_13260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02275.1"
                     /translation="MTTTDQQVRIIMKELSEHGNQGRAAAKAGVCRQTAARYLQAGKL
                     PSELNKAHEWQRRENPFAEVWPEIEARLRQEPWVWVRFLFEELQERYPGGSPPVSSGR
                     CTGI"
     gene            517..1665
                     /locus_tag="VE844_13265"
     CDS             517..1665
                     /locus_tag="VE844_13265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HZC02276.1"
                     /translation="MLHGADQGHEVFFPQRHRPGEAGQTDFTHTQSLAMRLEGEPFAP
                     LLCHFVLPYSNWEWAYRCQSESLLALKKGVQEAVFRLGRVPEWHQTDNSCGATHQVSA
                     GGRAFLPDYLELMAHLGMKPRTTAIGQKEQNGTVEAQNGTFKRYLNQRLQTRGSREFA
                     SVDAFDGWLVENLAKENSRRQVRLQEELAVMRPLQVSRLPEYREVPVRVSRNSTINVL
                     HNIYSVPPRLMHQVVRVRLYEERLEVYYHQSLIQTLPRLIGRAHHRVNYPHVIWSLVH
                     KPGAFARYRYREDLYPTLTFRTAYERLQPAWPGTKGDAAYLRILHLAASTLESEVQVA
                     LDLLLESGTLPTLEAVRDLVGPPPLASPVLPAPEVDFGSYDQLLELAR"
     gene            1662..2462
                     /gene="istB"
                     /locus_tag="VE844_13270"
     CDS             1662..2462
                     /gene="istB"
                     /locus_tag="VE844_13270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004071053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HZC02277.1"
                     /translation="MSSLDLMLRELHLGTVGRHAQEVAIRAEREGWSFTRYLHDVVEL
                     ELLEREQRRIQRRFKESGLPLSKTLTTLEVERLPEPVRRQLPTLCEGHFVERAQNILA
                     FGLPGRGKTHLLCAIGQALIERGYRVLFTPAFKLVQRLLSAKHDLHLEKDLRRLDGYA
                     AVILDDIGYLQQNRDEMEVLFTFLAERYERKSVLISSNLVFSQWDRIFKDPMTTAAID
                     RLVHHATILELTGPSYRTDKAKEKVNEAKPTLTEMNPALEENINPQSS"
     gene            2565..>2787
                     /locus_tag="VE844_13275"
     CDS             2565..>2787
                     /locus_tag="VE844_13275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002616282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC02278.1"
                     /translation="MLWCYSHAHRLAHQGLWDVCVDEIPNYQVLERYPIRRAIPGSIE
                     QQEFEYTRHGTVNILLFLIVHAGQMEAVIV"
BASE COUNT          615 a          759 c          844 g          569 t
ORIGIN      
        1 gtatggttga gagaactgct cactttctga tcccgcctct gcctctgtac atgcttgccg
       61 ttgcccagct gctcagtgac aattagaaat taacatcact gacgattaaa aattaacatt
      121 acagcaggtc acctgtaagt gaagcaagct atgtcccttg gatggttaag gaaggacata
      181 gcgaatgaca accacagatc aacaggtgag gatcatcatg aaagagctga gcgaacatgg
      241 gaaccaaggg agagccgcag ctaaagctgg ggtatgccgg caaacagcgg cgcgctacct
      301 tcaagcgggc aagttgcctt cggaactgaa caaggcccat gagtggcaga ggcgggaaaa
      361 tccgtttgcg gaggtgtggc cggagatcga ggcgcggtta aggcaagaac cttgggtatg
      421 ggtccgtttt ctgtttgagg agttgcagga gcgttatccg gggggttcac ccccggtcag
      481 ctccggacgc tgcaccggca tatagccaag tggggggtgc tccatggggc agaccaaggc
      541 catgaggtct ttttccccca gcggcatcgg ccgggcgagg cgggacaaac cgacttcacc
      601 catacccaga gtctggcgat gaggttggag ggggagccct ttgccccgtt gctgtgtcat
      661 tttgtgctgc cgtactcgaa ttgggagtgg gcctatcgct gtcaatcgga gtcgctctta
      721 gcgctgaaga agggggtgca agaagcggtt tttcggctgg gacgtgtgcc ggagtggcat
      781 caaaccgata attcgtgtgg ggcgacgcac caagtctccg caggagggcg ggcgtttctg
      841 cctgactatc tagagctaat ggcgcatctt gggatgaagc cccggaccac ggcgatcggg
      901 cagaaggagc agaatgggac agttgaggcg caaaacggga cgtttaagcg ctatttaaat
      961 caacgcctgc aaacgcgggg gagccgggaa tttgccagcg tagacgcctt tgatgggtgg
     1021 ctggtggaga atctcgccaa agagaatagc cgccggcagg tacggctgca ggaggagttg
     1081 gcggtcatga ggccgctgca ggtgagccgc ttacccgagt atcgggaggt gcccgtacgg
     1141 gtcagccgca acagcaccat caacgtcctg cacaatatct actcggtgcc gccgcggctg
     1201 atgcaccaag ttgtgcgggt ccgcttgtat gaagagcggc tggaagtcta ttatcaccag
     1261 agcctgatcc aaacgctgcc ccggctgatt gggcgggcgc accatcgggt caactacccg
     1321 catgtgatct ggtccttggt gcataagccg ggggcctttg cccggtatcg gtaccgcgaa
     1381 gacctttatc ccactctgac cttccgcacg gcttatgagc gcttacaacc ggcgtggccg
     1441 gggaccaaag gcgatgcggc ctacctgcgg atcctgcact tggccgcctc caccctggag
     1501 agtgaggtgc aggtggcgct cgatctcctc ttggagagcg gaacgctccc tacccttgaa
     1561 gcggtgcgcg acttggttgg gccacccccg ctggcgagcc cagtactccc ggcgcctgag
     1621 gtggacttcg gcagctacga ccagttgctg gagctcgccc gatgagcagt ctggatctca
     1681 tgttacggga actgcacttg ggaaccgtgg ggcgccatgc ccaggaagtt gcgatccggg
     1741 cggaacgcga gggctggagc tttactcgct acctccatga tgtagtcgag ctggagttgc
     1801 tcgaacgcga gcagcggcgg atccaaagac gcttcaagga gtccgggttg cctctcagca
     1861 agaccttgac caccctggag gtagagcgct tgcctgagcc cgtgcgccgg cagttgccta
     1921 ctctctgcga gggacacttt gtcgagcggg cccagaatat cctcgccttt ggcttgccgg
     1981 gtcgtggtaa aacccaccta ctctgcgcca tcggccaggc cttgatcgag cgcggctacc
     2041 gggtcctctt tacccctgcc ttcaagctgg tgcagcgctt gctcagcgct aaacacgact
     2101 tacacttgga aaaagacttg cgccgtcttg atggctatgc cgccgtcatc ctcgatgaca
     2161 tcggctatct tcagcagaat cgtgatgaga tggaggtgtt gtttaccttc ctcgccgaac
     2221 gctatgagcg caagagcgta ttgatcagca gcaacctggt cttcagccaa tgggaccgta
     2281 tcttcaagga ccccatgacc accgccgcca tcgaccggct ggtgcatcat gccaccatcc
     2341 tcgagctgac cggccccagt tatcgtacag ataaagctaa ggagaaagtc aatgaagcta
     2401 aaccaacctt aactgagatg aaccctgctt tagaggagaa catcaatcca caaagcagtt
     2461 aattgaaaaa ggtgaccggc tcaatgttaa aaaataattg tcatccatgt taaaaaatag
     2521 ttgacaatga gcaggatgcc gagttcaaac aacgggccga gaaagtgctg tggtgctaca
     2581 gccatgccca tcgcttggcc caccaggggc tgtgggatgt ctgcgtcgat gagatcccca
     2641 attaccaagt cttggaacgc tatccgattc gccgcgcgat tcccggctcg atcgagcagc
     2701 aagaatttga atacacgcgc cacgggactg tcaacatcct gctcttcttg atcgtacacg
     2761 cgggccagat ggaagcggtg atcgtgg
//
LOCUS       DASQSL010001289         2611 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_131666, whole genome shotgun sequence.
ACCESSION   DASQSL010001289 DASQSL010000000
VERSION     DASQSL010001289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2611
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131666"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(301..969)
                     /locus_tag="VE844_13280"
     CDS             complement(301..969)
                     /locus_tag="VE844_13280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02279.1"
                     /translation="MPSFRRHSSAITPNTERSGLHEGASDSPAASASLWFTIVLEEYK
                     ALRVEIVDAIHAQRTIMQLGVTGVSVLIGIGLQRTPSLLASIILTILVPFVTFFITTA
                     AWGELFRAARASLFIWKREAVINKFVKGPDSPAMAWESWLRGRKISVASTGGQFLVLY
                     VLTIGAAIMGCVTMFTVEVRHDQPVIVLIGVCAATALACAASLIRYAQLRRWTEREFR
                     GLES"
     gene            complement(1171..1485)
                     /locus_tag="VE844_13285"
     CDS             complement(1171..1485)
                     /locus_tag="VE844_13285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02280.1"
                     /translation="MTRTLTVADRLIPRDWQRSRVRFPAQVHDGYWVRHRLAGKARLL
                     YFSAVHLKMISQIRIDYLVSLVGHVTPEVAPRTDVLALDVSLVPRMHRRMQDRAFGVH
                     LP"
     gene            complement(1825..2202)
                     /locus_tag="VE844_13290"
     CDS             complement(1825..2202)
                     /locus_tag="VE844_13290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011208409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HZC02281.1"
                     /translation="MATQTLTEANFDEVVTGNDVVFVCFCDSSSDGCRRFAPTFEASS
                     NAHSDVVYGTVDVEAEQDLAAAANISRCPTIMAYRKGVLVYSQPDGLPPEALENVVTQ
                     VKAIDLDEDHKELDQARNQLAGE"
BASE COUNT          585 a          784 c          718 g          524 t
ORIGIN      
        1 ttcacacgcc ggtcaccggc caccattcgt ccacggatcc aggctaaagg ccaagcgtca
       61 atgatcacgc gaccgctgaa ggaacatgcc cttcaacagc cgccagcacc tggtcacact
      121 gcccgagacg tatgccctga tgactaggcc ttcaccccga agtggtcatg gcccaccaaa
      181 gatactagtg aattttgcac tactatgcag gctgatggtc aaattttaga ggcggcaacc
      241 ggatcggagt actgattaga tccgaagaag ctttaggatg tgctcctgcc tctaggcatt
      301 tcatgattcg agtccccgga actcccgctc tgtccagcga cgcagttgcg catagcgaat
      361 caaactggca gcacatgcca atgctgtggc tgcgcataca cctattagca cgatgacagg
      421 ctgatcgtgc cggacctcca cggtaaacat cgtcacacag cccattatgg ccgcgccaat
      481 agttagaacg taaagcacaa gaaattggcc acccgtactc gcaacggaaa tcttccggcc
      541 acgcaaccag ctctcccatg ccattgcagg agaatccgga cccttcacaa atttgtttat
      601 tacggcctcc cgcttccaga taaacaaact ggccctggcg gccctaaaca gttcacccca
      661 tgcggcagtg gtgataaaga aggtaacaaa cggaacaaga attgtcaaaa taattgacgc
      721 caatagagac ggtgttcgtt gcagacctat tccaataagt acggatactc cagtcacccc
      781 taactgcata atggtacgct gagcgtgaat tgcatctaca atctccactc gcagcgcttt
      841 gtattcctcg agaactatcg tgaaccacag tgatgccgac gcagcaggcg aatccgaagc
      901 tccctcatga aggccggatc gttcagtgtt cggtgttatg gcgctgctat gacgacgaaa
      961 actaggcatc ggtttcctcc tcgctgctgg actcctcggg caccgctttg ggagcgaaga
     1021 atcgcgagtt caactccctc gcctgccact tgctaaatgt ggcaggtgtc tatcatgtgt
     1081 cggcatgtca gccatgccta accgccgttc ccttgccctg actcgcagat tctgaagttg
     1141 atcgtcaaca acgcgatcgg cgcgatgcag tcaggggagg tggacgccga aggcgcgatc
     1201 ctgcatgcgg cggtgcatgc gtggtacgag ggacacatcg agggcgagga cgtctgtcct
     1261 gggtgcgact tcaggggtga catgccccac cagcgacaca aggtaatcaa tcctgatctg
     1321 actgatcatc ttcaagtgta cagctgagaa gtacagcaac cgtgccttac cagccagacg
     1381 atgccggacc cagtaaccat catggacctg cgcaggaaac cttacgcggc tgcgctgcca
     1441 atctctgggg atcaagcgat cagctaccgt cagggtgcgg gtcacggtgc atctgttggt
     1501 gacctagaag ctgatcctga acagtctgcg gagttcgcac cgcagtggtc agcaggagtc
     1561 ccaccatgta gcagccgtgt agcaactccc ccggcacgac ggcaggcggt cccacatcac
     1621 agcgaaagat tgttcgaggt ccgacaccac aaacacactg cgtcacacag cctgccggga
     1681 cttacaagcg aggggtccaa ccagcttgat cgagtaggca tgggcgttcg taccagttcg
     1741 tccatggaac tacccggatg gactctcccc gtggccgcgc cgcggggaag gcccccaaaa
     1801 cagcccacga accgtgtgtt tcgcttactc cccagccagc tggttacgcg cttggtccag
     1861 ctccttgtgg tcttcgtcca agtcaatggc cttcacctgg gtgaccacgt tctccagggc
     1921 ctcgggaggc agcccatccg gctgcgagta caccagcaca cccttccggt acgccatgat
     1981 ggtggggcac ctgctgatgt tggcagcggc cgccaagtcc tgctcggcct cgacatcgac
     2041 cgtgccgtag acgacgtcgg agtgcgcgtt cgaggacgcc tcgaacgtcg gcgcgaacct
     2101 acggcagccg tcggacgagg agtcacagaa acagacgaaa accacatcgt tgccggtgac
     2161 tacctcatcg aagttcgctt cagtcagggt ctgggtggcc atagcaaccc ttcatctcgt
     2221 tgtgccgatg caccaccgtg cacgtcgatt atcttgcacc tacttgagcg cctggccgtg
     2281 atcaaccctg atctgaactg atcgtcttta cgtgtacagc tgagaagtac agcaaactgt
     2341 gccccacgag ccggacgatg ccggactctg caaccatggc tgactggaag tctggtcaga
     2401 gccgcagccc attttaaaac tccacgggct cgcgtgggtc gaagtcctcg ggaagcgcat
     2461 tcgggcttcg agatcttgtt tgtgactcag gggcccagca gcttggccac gcgcacgagc
     2521 ggtgccgcca gcgtggggat ctggtgtggg tcggtgatcg agccggtttg ccatgtcagg
     2581 aggtcgtggc cggcgaggtt ccacaggggt a
//
LOCUS       DASQSL010001290         1570 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_169664, whole genome shotgun sequence.
ACCESSION   DASQSL010001290 DASQSL010000000
VERSION     DASQSL010001290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1570
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169664"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            161..1357
                     /locus_tag="VE844_13295"
     CDS             161..1357
                     /locus_tag="VE844_13295"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02282.1"
                     /translation="MWPFTCLPRNVYDVLYPFKPLFRCGQGRHFVIFAWLLVAIIRDP
                     GVGTLKGVLPYVPAGLSYWALLRMVRSGQWDAQAVLSGMSQKVVRTLPPPADGRLYLI
                     GDTTHKTKRGRKHPLGHVTRQSESSPYTFGFDMVVLIASWDSFRIPVAIAPIDPKRKG
                     HQNILFRQMLKDFVAPVWVREIIVVADAGYAANPTLKLIHDLHWTYVFAMPRTRKFTN
                     GKHVRDMVQHLPKVHYRRRATYKPDGRRQDYWVFMRQAKLHQLGDVTIVLSKKRRNLG
                     PKRVKIIVTNLLAAPVGDILSIYARRWGVELTIKELKSGLHLGRMQVTSDAERVTRSV
                     VLPVCAYLLLLHLYSGKEGVKDASSQAGSLFRLKQRFTEDMMRDHVKRVEQKWRRKWH
                     KTKEVA"
BASE COUNT          361 a          444 c          427 g          338 t
ORIGIN      
        1 cattccgata taatcgacct ctctttacag tccacaatac tcaaaagtgg cgggtgagag
       61 gtctgccgaa gtgagatagg gtctaacatg tgtttgaaaa acaaggactc ctgtgtatct
      121 tggaaggtcg ccaaacccca atacacacag gagcccaccc atgtggccat tcacatgctt
      181 accccgcaac gtatacgacg ttctctatcc cttcaagccc ctttttcgct gtggccaagg
      241 ccggcacttc gtgatcttcg cctggctctt ggttgccatc atccgcgacc ccggcgtggg
      301 aaccctcaaa ggagtgctgc cctatgtgcc agcgggcttg tcgtattggg cgctgctgcg
      361 catggtgcga tcgggtcagt gggatgccca agccgtcttg agtgggatga gtcagaaggt
      421 agtacggact ttaccgccac ctgccgatgg gcggctctac ctcattggcg ataccacgca
      481 caaaaccaag cgaggacgca agcatccctt ggggcatgtg acccgtcaaa gtgaatcgtc
      541 accttacacc tttggctttg acatggtggt gttaatcgcc agttgggaca gctttcgcat
      601 ccctgtagcg atcgccccga ttgatcccaa gcgcaaagga caccagaata ttctattccg
      661 gcagatgctc aaagactttg tcgccccggt gtgggtgcgc gagatcatcg tggtggccga
      721 tgcgggctat gccgccaatc ccaccctcaa gctcatccat gatttgcact ggacctacgt
      781 ctttgccatg ccgcgcacgc gcaagtttac caatggcaag cacgtgcgcg acatggtgca
      841 gcacctcccc aaagtccact atcgtcgtcg ggccacctac aagcccgacg ggcgtcgaca
      901 agattactgg gtgttcatgc gtcaagccaa gctgcatcag ctgggcgatg tcacgatcgt
      961 gttatccaaa aagcggcgaa acttagggcc gaaacgtgtc aagatcatcg tgaccaatct
     1021 cctggcggca ccggttggcg acattctcag tatctacgcg cggcgttggg gcgtggagct
     1081 cacgatcaag gagctcaaga gtggcttaca tttgggtcgc atgcaggtaa ccagtgacgc
     1141 tgagcgggtc actcgttcgg tggtattgcc ggtgtgtgcc tacctgttgt tattgcactt
     1201 gtacagtggc aaggagggcg tcaaagacgc atccagtcag gctgggagcc tgttccggct
     1261 caaacagcgc tttaccgagg acatgatgcg agatcacgtg aaacgagttg agcaaaaatg
     1321 gcggcgcaag tggcataaaa ccaaagaggt cgcataactg gtcaggaatg acccgccact
     1381 tttgagtcta ctcgcaatcc cagattgtgg atgacgaagg tcgaggattc gcgtggacag
     1441 gtggcacaga gccggcagcg gcacccccaa cgtctatact ggcatcagca tccgctgctg
     1501 acaaaaagtc gtcacccatc tcctatacac caccatatct cacggaaaaa atcctgacct
     1561 ccagaagtgc
//
LOCUS       DASQSL010001291         1298 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_23905, whole genome shotgun sequence.
ACCESSION   DASQSL010001291 DASQSL010000000
VERSION     DASQSL010001291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1298
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23905"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(338..>1298)
                     /locus_tag="VE844_13300"
     CDS             complement(338..>1298)
                     /locus_tag="VE844_13300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02283.1"
                     /translation="TLRQYAEKDPSGLFTIPFVDYGRGDGLSVGPDQDREWDRPRLLQ
                     DPVPSWVSGYRGLWGLYTRDPFEGEDAPAGPMYDRDKSLSREWYDPVGWAGLDKVPTR
                     AEELTDILEQRSEIEERRGGLRAEVFQKSRELRRLGIAAEATRDRSHLRELHEVQTGR
                     IAALSKEVEGLREELSTDEVLTEALDEHANRLRNGERPPANAHITRAARPVPESEART
                     GRVAQLWASISVAVVLLMLTGILVYQRQHLLFALVFAIAVFAFVEASFRKRLSRFMVS
                     VNIGLSVVGAFVILDRFFWQIIVLSVLAVGLYILWENLRELGR"
BASE COUNT          272 a          409 c          368 g          249 t
ORIGIN      
        1 ccggatcggg ttcttcttgc cggtagtgtt ggtagcccag ccggcctcgg gtcaaggcga
       61 cgagcaacag cgctaacaac ccaaagctga gcagaaagtt ggtgaatacg tctgccgggg
      121 caaagagcag ccttaggggc acactaaagg tgccaataga tgcgtgcatc aacattgcca
      181 tacgtaggct gcctttctcg ttgttgaaaa cccacgttat gacgatggca acagccatag
      241 caaagatgac aatcttgcta tttgcctata tcgaggatgc cactgcaacc agaggactcc
      301 gcccaagacg gacccatgaa ctcgggcagg taccacacta ccgcccaagc tcccgcaggt
      361 tctcccagag aatgtagagg cccacggcca gcaccgacag gacgattatc tgccagaaga
      421 accggtcgag aatcacgaaa gcacctacca ccgacaggcc gatgttgacg ctgaccatga
      481 acctgctaag ccgcttcctg aaactggctt cgacaaacgc aaacacggcg atggcaaaga
      541 cgagcgcgaa gagcaggtgt tgtctctggt agacgagtat tccggttagc atcaggagca
      601 ccaccgccac gctgatagaa gcccacagct gtgccacccg gccggtgcgg gcctcgcttt
      661 caggaacggg acgtgccgcg cgtgttatgt gggcgttcgc gggagggcgc tcaccgtttc
      721 tcaagcggtt ggcgtgctcg tccagcgcct cggtgagaac ctcgtcagtg gacaactctt
      781 cgcgcaaccc ctctacttct ttagaaagtg ctgcgatgcg ccctgtctgg acctcgtgaa
      841 gttccctcag gtgggatctg tcccgcgtgg cctcggccgc tataccgagc ctcctcagct
      901 cgcggctctt ttggaatacc tcagcgcgga gaccgccgcg gcgttcctcg atctcggacc
      961 tctgttcgag gatgtcggtc agctcctcgg ccctggtggg cactttgtcg agcccggccc
     1021 atcccactgg gtcgtaccac tccctgctta agctcttatc gcggtcgtac atgggcccgg
     1081 cgggcgcatc ctcgccttcg aacggatccc gggtgtagag accccacaat ccccgatacc
     1141 cggacaccca ggatggcaca gggtcttgca agagccgggg acggtcccat tccctgtcct
     1201 gatccggccc aaccgacagc ccgtcaccgc gtccgtagtc cacgaaaggg atagtgaata
     1261 gcccggaggg atctttttcc gcatactggc gcagtgtc
//
LOCUS       DASQSL010001292         1328 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_169678, whole genome shotgun sequence.
ACCESSION   DASQSL010001292 DASQSL010000000
VERSION     DASQSL010001292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1328
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169678"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1328
                     /gene="nadB"
                     /locus_tag="VE844_13305"
     CDS             <1..>1328
                     /gene="nadB"
                     /locus_tag="VE844_13305"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018231178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008734 - L-aspartate oxidase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HZC02284.1"
                     /translation="RAIVQHIVEHGRESIQWLIDLGVPFTRATEASGTTEFHLTREGG
                     HSHRRVVHAADATGQALEMALLDRVRAYPAITLFDQHIAIDLLTGAKLGLPSQRCLGA
                     YVLDRKNCRVVTFGASFVVLASGGAGKVYLYTSNPDVATGDGIAMAWRAGCPIANMEF
                     IQFHPTCLYHPKAKSFLLTEAIRGEGGRLLLPDGSTFMERFDPRAELASRDIVARAID
                     HEMKRLGADCLYLDISYRPADFILSHFPTVSAKCREFGIDITEEPIPVVPAAHYTCGG
                     VITDRHGRTSIPGLYAIGEVACTGLHGANRMASNSLLECLVMAKAAAQDILASWTEVP
                     GVRALPPWDESQVTDSDEEVVVAHNWDELRRFMWDYVGIVRTTKRLERAKRRVQLLRD
                     EIAEYYGNFRVTNDLIELRNLVQVAELIITSALQRKESRGLHYTLDYPYP"
BASE COUNT          271 a          381 c          382 g          294 t
ORIGIN      
        1 gcgagcgatc gtccaacaca ttgtcgaaca tggacgtgag agcatccaat ggctcatcga
       61 tctgggcgtg cctttcacgc gcgctactga agcgagcggc accaccgaat ttcatttaac
      121 ccgcgaaggc gggcatagcc accggcgcgt agtacacgcc gcggatgcca ctggtcaggc
      181 tctagagatg gctttgctcg atcgtgtgcg ggcctatccg gcaatcacgc tgtttgatca
      241 gcatatcgcc atagatctgc tcacaggcgc aaaactcgga cttccgagcc aacgctgtct
      301 gggcgcctat gtcttagatc gaaaaaactg ccgggtggtc acctttggcg cctcctttgt
      361 agtgctggcg agcggtggag cgggtaaggt ttatctctac accagcaacc cagatgtggc
      421 taccggggat ggtatcgcga tggcttggcg ggcgggctgc cccatcgcca atatggaatt
      481 cattcagttt catcccacct gcctttatca ccccaaggcc aaatcgttcc tccttactga
      541 ggcgatccgc ggggaaggcg gtagattgct gctgcccgat ggcagcacct tcatggagcg
      601 cttcgatcct cgggcggaat tggcttctcg cgatatcgtc gctcgcgcga tcgaccacga
      661 gatgaagcgt ctgggcgccg actgcctcta cctcgacatc agctatcggc ccgcggattt
      721 tatcctcagc cactttccta cggtaagcgc caaatgccgg gagttcggca tagacatcac
      781 agaagagcct atcccagtgg tgcctgctgc ccattatacc tgcggtggtg tgataactga
      841 ccgccatgga cgaacctcta tccccggcct ctatgccatc ggcgaggtcg cctgcactgg
      901 cctgcacggg gctaatcgca tggccagcaa ttcgctgctc gagtgcctgg tcatggccaa
      961 agcagccgct caagacattc ttgcctcctg gacggaggtt ccgggcgtac gcgcgctacc
     1021 cccctgggac gaaagtcagg tgaccgactc ggatgaagag gtggtggttg cccataactg
     1081 ggatgagttg cgtcgtttca tgtgggatta tgtgggcatt gtgcggacca ccaagcgcct
     1141 ggagcgggca aaacggcggg tgcagttatt gcgcgatgag atcgctgaat actatggaaa
     1201 ttttcgtgtg accaacgatt taattgagtt acgcaatctg gtgcaagtag cggagctcat
     1261 catcacttcg gccttacagc gtaaagaaag ccggggattg cactacacgc ttgactatcc
     1321 ttatcccg
//
LOCUS       DASQSL010001293         1072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_197328, whole genome shotgun sequence.
ACCESSION   DASQSL010001293 DASQSL010000000
VERSION     DASQSL010001293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197328"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..749
                     /locus_tag="VE844_13310"
     CDS             <1..749
                     /locus_tag="VE844_13310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013033941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphosulfolactate synthase"
                     /protein_id="HZC02285.1"
                     /translation="IRGPYYTPMGKRYLRDVLETMGPYVDSLKFAGGSFTLMPRPALG
                     EVIATAHEFNVLVSTGGFIEYVLTQGQDAVEQYIRECKEVGFDIIEISAGFITLPTDD
                     WLQVIEKVQQAGLRAKPEVEIQFGAGGATSAEALEAAGTHDPGWMIQQAKRFLEAGAY
                     IIMIESEGITENVRSWRTDVVAKVINELGLEKIMFEAADPEVFTWYVKHYGPEVNLFV
                     DHSQIVQLECLRAGIWGTQSLWGRVLTYKE"
     gene            764..>1072
                     /locus_tag="VE844_13315"
     CDS             764..>1072
                     /locus_tag="VE844_13315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016872811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008452 - RNA ligase activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RtcB family protein"
                     /protein_id="HZC02286.1"
                     /translation="MATIDQLKRISDTLWELSTSFKEGMHVPARIYATEQLIRTMDEA
                     VYEQTSNVACLPGITKYALCMPDGHFGYGFPIGGVAAMDVDEGGVISPGGIGFDINCG
                     M"
BASE COUNT          221 a          273 c          351 g          227 t
ORIGIN      
        1 agatccgcgg cccctactat acgccgatgg gaaagcgcta tctgcgagat gtcctggaga
       61 cgatgggacc ctatgtggat tcgctgaagt tcgccggggg ctcgttcacg ctgatgccgc
      121 gtccggctct gggggaggtc atagccaccg cccatgagtt caatgtattg gtctcaaccg
      181 gcgggtttat cgagtacgtg ttgactcaag ggcaggatgc ggtcgagcag tacatccggg
      241 agtgcaagga ggtggggttt gacatcattg agatctcggc tggcttcatt acccttccca
      301 ctgatgattg gctgcaggtg attgagaagg tccagcaggc tggtttgagg gccaagcccg
      361 aggtcgagat ccagttcggc gccggtgggg cgacgtccgc tgaagcgctt gaggcggccg
      421 ggacgcacga tccgggctgg atgattcagc aggcaaaacg ttttcttgag gccggcgcct
      481 atataatcat gatcgaatcc gaaggtatca cagaaaacgt gcggtcctgg cgaaccgatg
      541 tagtcgccaa ggtgatcaac gagctgggcc tggagaagat catgttcgag gctgcagatc
      601 cggaggtctt tacctggtac gtcaagcact atggacccga ggtcaatctc ttcgtcgacc
      661 atagccagat cgtgcagctt gagtgcctgc gtgccgggat ctggggtact cagagcctgt
      721 ggggacgcgt gcttacctac aaggaatagc cgagagtggg gttatggcta ccatcgatca
      781 gctaaagcgg atctcggaca ccctgtggga gctctccacc tcatttaaag agggaatgca
      841 cgtaccggcg cgtatctatg cgacggaaca actgatccgt accatggatg aggcggtgta
      901 cgagcagacc agcaacgtcg cctgtctccc agggatcacc aaatacgccc tgtgtatgcc
      961 agatgggcac ttcggctacg gtttccccat cggcggggtg gctgccatgg acgtggatga
     1021 ggggggcgtt atctcgccgg gcggtatcgg gttcgatatc aactgcggga tg
//
LOCUS       DASQSL010001294         1893 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_131741, whole genome shotgun sequence.
ACCESSION   DASQSL010001294 DASQSL010000000
VERSION     DASQSL010001294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1893)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1893)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1893
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131741"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(266..1672)
                     /locus_tag="VE844_13320"
     CDS             complement(266..1672)
                     /locus_tag="VE844_13320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02287.1"
                     /translation="MSEQCNSTSAAALSPLPDGHVVSIRVANDHPLLQLKRALNWEAI
                     QAVMVKHWRKTGRNVDGGPGLPWPVDLYVPLLVLMGVKTLDSRQMEHYVEENVVARLF
                     LGIEGQLSPRVRDHSNIARAQASLGVAGWQEVNELIVGEATRLGFGQVEMVSSDTTVQ
                     EPAIGYPNEAGIMRGVAQRVYRSLVKVKEKGLEAVEAGKGKAKELFKTVKEYHLFART
                     PEQKGQLLHQLVAQTGELIAHSQEVIRQVGRSAKRVTQSAVRKMGQMIEVSATLLPQI
                     GHWLQTGVVARGKILHAGITQARAIVKNKAGKRVEFGLKWLVNRIEGGYVFGRVVEAG
                     ADERAMPIEAMKDYQRVFGAQAVPKMSVYDRGGSAPKTIEALKRQGIEKVGIPPRGKA
                     KWCVAEADQPQVRSQRGKTEGVIGTLKSRKYGFNHRTERSNETLIAAGQRVMVCLNLN
                     KLMRDVVGKEKKAQVATA"
BASE COUNT          354 a          624 c          461 g          454 t
ORIGIN      
        1 ttcttgccag cgatagaggc tgtttttgct cacgcggaac agacggcaaa ccgcgttgac
       61 ccccaacccc tcggtagcac cccagttaac cgtggtgggt aatgaagacc gttgaaaagg
      121 ggtgggtcca aagtagatcc ttaagatgta attagagcgt gtcgcataat tcgagacagg
      181 tgaatccttc ctcttttgtc cttctgcggt cgcttttcct ctcttttttc ttcgctgctc
      241 tctcttcttc tcgcctgttt ctgcttcagg ctgttgctac ctgcgctttc ttttctttcc
      301 cgacgacgtc ccgcatcagc ttgttcaaat tcagacagac catcacccgc tgtcccgcgg
      361 ctattaacgt ttcgttgctt ctctcggtgc ggtgattgaa accgtacttc cgactcttga
      421 gcgtgccgat cactccctcg gtcttcccgc gctggctgcg cacttggggc tggtcggcct
      481 cggccacgca ccatttggct ttcccgcgcg gtgggatacc gaccttctcg atgccctgcc
      541 gtttcaacgc ctcgatcgtt ttcggcgcgc tccccccgcg gtcgtagacg ctcatcttcg
      601 ggacggcttg cgccccgaaa acccgctgat aatctttcat cgcttcgatc ggcatggccc
      661 gctcgtccgc acccgcttcg actactcgcc caaacacata ccccccttcg atgcgattga
      721 ccagccactt caacccaaac tccacgcgct tgcccgcctt gtttttgaca atcgcccgcg
      781 cctgggtgat ccccgcgtgt aagatcttgc ccctcgccac tactccggtc tgcagccagt
      841 gcccaatctg cggcagcaag gtggcactca cctcgatcat ctgccccatt ttcctgaccg
      901 ccgattgggt cactctcttg gcgctgcggc ccacctgcct gattacctct tggctgtgcg
      961 cgatcaactc cccggtctgc gcgacgagtt gatgcaggag ttgacctttc tgctcgggag
     1021 tcctggcaaa cagatggtac tctttgaccg tcttgaagag ctcttttgcc ttccctttcc
     1081 cggcctcgac cgcttccagg cctttctctt tcactttcac caggctgcga tagacgcgct
     1141 gcgccactcc acgcataatc ccagcctcgt tcggatagcc gatggcgggc tcctgcacag
     1201 tcgtgtcgga ggacaccatc tccacctgac caaagcccag gcgcgtggcc tcgcccacga
     1261 tcaattcgtt gacctcctgc cagcccgcta cacccaagga ggcttgcgcc cgtgcgatgt
     1321 tcgagtgatc gcgcacccgc ggcgagagtt gaccctcgat gccgagaaac aatcgcgcca
     1381 ccacgttctc ctccacgtag tgctccatct gccgcgaatc gagcgtcttg acacccatca
     1441 agaccaacaa gggcacatac aagtccaccg gccaaggcaa gccgggtcca ccatcgacgt
     1501 ttctgcccgt cttgcgccaa tgcttgacca tcaccgcctg gatcgcctcc cagttcaagg
     1561 cacgcttgag ttgcagtaac ggatgatcgt tcgcgacccg gatcgagacg acgtgtccat
     1621 cgggcagtgg cgaaagagcc gctgcagaag tagaattgca ctgctcgctc ataatgacct
     1681 ccggaggtga tggtggtaat catgccggaa gtatcagaga ggagtgggag cttttcaatc
     1741 ctgaagagct tgaaaagctc ccttgatttt gtacgtcacc gctttaatca cacccattta
     1801 tgcgacacgc tctatctacg aatgagaaaa atgcactcac gcgaacgtat cggaggagga
     1861 ttgaccacgg aatcaataca gatccgaatg cta
//
LOCUS       DASQSL010001295         1126 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_146684, whole genome shotgun sequence.
ACCESSION   DASQSL010001295 DASQSL010000000
VERSION     DASQSL010001295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146684"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..983)
                     /locus_tag="VE844_13325"
     rRNA            complement(<1..983)
                     /locus_tag="VE844_13325"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          213 a          367 c          272 g          274 t
ORIGIN      
        1 cggtaagctg gtaggccccc tagcccaagc agtgctctac agccgtcgtt gaacacgcga
       61 cgctatacct aaatatattt cggggagaac cagatatctc tgagtttgat tagcctttca
      121 ctccgaccca caggtcatcc gctcagtttt caacctaagt cggttcggcc ctccacgggg
      181 tcttaccccc gcttcagcct gcccatgggt agatcactca gtttcgggtc tgcatccgac
      241 gactaaatcg ccctattcgg actcgctttc gctacggctc cgtttcctta accttgccgt
      301 cgaacagcaa ctcgctggct cattatgcaa aaggcacgcc gtcacaggca caaggcctgc
      361 tccgaccgct tgtaagcaca cggtttcagg tactatttca ctccccttcc ggggtacttt
      421 tcacctttcc ctcacggtac tagttcacta tcggtcgcca gggagtactt agccttacgg
      481 ggtggtcccc gtggattcgg accgggtttc ccgtgcccgg ccgtactcag gaacccgtca
      541 aggaaggcca aatgctttcg cctacagggc tgttaccttc tgtggcgcga gtttccaccc
      601 gcttcgacta acacttggct ttgtaacttc ccgacccgcc ggcagacgga tcaagacgag
      661 ccctacgaca cccacgtgac aacggctgcc gcctatcacg tcacatgggt ttaggctctt
      721 cccttttcgc tcgccactac tcagggagtc gaggtttctt tcctttcctc cggttactaa
      781 gatgtttcag ttcaccggct tgccttccgt gccctatgga ttcaggcagg gacacgcgcg
      841 cattaccacg cgtaggtttc cccattcgga catcccggga tcaagggttg gtcagcacct
      901 cccccgggct tttcgcagcc gcccacgtcc ttcatcagct cttggcgcca aggcatccac
      961 cgtgtgccct tgttctcttg atcgaaaaga acacttctgt tgccgctatg gagttttcaa
     1021 ggtgcacgcg gaccggtgtc cgcgagaaga tccgcccggt aggacggtct ctcaaaactc
     1081 aacagcgtac gccgtacgaa acaccgaggt cgacgttctt ctaggc
//
LOCUS       DASQSL010001296         1223 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_197335, whole genome shotgun sequence.
ACCESSION   DASQSL010001296 DASQSL010000000
VERSION     DASQSL010001296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1223
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197335"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..494)
                     /locus_tag="VE844_13330"
     CDS             complement(<1..494)
                     /locus_tag="VE844_13330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018869820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase domain-containing
                     protein"
                     /protein_id="HZC02288.1"
                     /translation="MSSNPVKKVVLAYSGGLDTSVILKWLEETYGCEVVTFTADIGQG
                     EELDPARAKAQAMGVKAIYIEDLKDAFVRDFVFPMFRANALYEGEYLLGTSIARPLIA
                     KRLVEIAIETGADAIAHGATGKGNDQVRFELGAYALKPDIRIIAPWREWALSSREKLL
                     AYAER"
     gene            complement(630..1073)
                     /locus_tag="VE844_13335"
     CDS             complement(630..1073)
                     /locus_tag="VE844_13335"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HZC02289.1"
                     /translation="MTVPHARFAINIVENSQNELLLLKRALQAQLGPGLWGFPAGHIE
                     SGETPLQCSLREIKEELGTEGSLELLDSLGPVRDSFYGGGYHIYLFHYRWRAGEIRLN
                     EEHTEYAWVSREHYRHYHVMDGIDEDIDYFKIWPRSYLNPDKLPR"
BASE COUNT          282 a          350 c          323 g          268 t
ORIGIN      
        1 cgttcggcat aggccaggag tttttcgcga gagctgagtg cccattcccg ccaaggagcg
       61 atgatccgga tatcgggctt gagcgcatag gccccgagct caaagcgcac ctggtcgttg
      121 cccttgccgg tcgcaccatg agcgatggcg tcggcgcccg tctcaatggc aatctcgacc
      181 agccgcttgg cgatcagcgg ccgtgcaatc gaggtgccga gcagatactc gccttcatag
      241 agggcattgg cgcgaaacat ggggaacaca aaatcccgca cgaacgcatc cttcagatct
      301 tcgatataga tcgccttgac acccatagct tgggccttgg ccctcgcggg atcgagctct
      361 tcgccttgac cgatgtcggc ggtaaaggtg accacctcac agccgtaggt ctcctcgagc
      421 cactttaaaa taaccgaggt atcgagtccc ccggaatagg ccagtacgac ctttttgacg
      481 ggattgctgg acataggttt gcttctttaa agttatcttc aaactatagt tttgccgagt
      541 aggctatgcg ccgtctagta gtccatcctt tataccccca cccctttcct cccccttggt
      601 aagggggaag gtgagggagg gggtagcact catcgcggaa gtttatcagg attgagatag
      661 gaccgtggcc agatcttgaa gtaatcgatg tcctcgtcga tcccatccat aacgtgatag
      721 tggcggtaat gttctcggct gacccaggcg tactcggtat gctcctcatt caagcggatc
      781 tcgcccgcgc gccagcggta gtgaaacaaa tagatgtggt agccgccccc ataaaaacta
      841 tcccgcaccg ggccgaggct atccaaaagt tcgagtgatc cctccgtacc gagctcttcc
      901 ttgatctccc gtagagagca ctgcaagggg gtctcacccg actcgatatg acctgcgggg
      961 aaaccccaaa gcccgggtcc gagctgggct tgcagcgcgc gcttcaaaag cagtaattca
     1021 ttctggctat tctccacaat gttgatagca aagcgggcat gagggacggt catgagggtc
     1081 ctatcctcca aagctattaa ggaacccgtt ttcgagccga taaaacgata aagtctagct
     1141 gactatagcc taatcttgcc tgaaaggttt aaaacgccat gatgacaacc cacccagaac
     1201 gtatctccac ccgggacacg atc
//
LOCUS       DASQSL010001297         1669 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_77573, whole genome shotgun sequence.
ACCESSION   DASQSL010001297 DASQSL010000000
VERSION     DASQSL010001297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1669
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77573"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            332..842
                     /locus_tag="VE844_13340"
                     /pseudo
     CDS             332..842
                     /locus_tag="VE844_13340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016953650.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            865..1488
                     /locus_tag="VE844_13345"
     CDS             865..1488
                     /locus_tag="VE844_13345"
                     /inference="COORDINATES: protein motif:HMM:NF019228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02290.1"
                     /translation="MAIGEFSRGGLTRGDNKACDHDFSDQEKYPPCGIIDEDSGQLVI
                     TFGSSFKTSDFIVDTLSAWWTGLSTQEQTATPGVQIKMDNGPESSAVRTQFLNRIVQF
                     ADRIGKPIQLLYYPPYHSKYNPIERCWGILELHWNGTKLVDVQTMLAWAQSMTWKGIH
                     PLVELSHTLYQRGVSLSKAAMRVVEARLERNPLLPNWDILIRPVAPA"
BASE COUNT          415 a          452 c          488 g          314 t
ORIGIN      
        1 aataccattg tgcttcctcc ctctgaaaaa aatgagtcat caatctcccg cctccttaaa
       61 attgtaaccc aacagaatta aaacactacc ggaagggtcg ttcgactccg caacaatagg
      121 ggaccaacaa tagggaccaa tggccgcttg ggtaaggtga tttcttgaaa agatattacc
      181 tacacctagc cggctcgatg aggttatcat taatctcata actaacccaa tccttggaga
      241 cgccctgtta accatgtgcg ccttagccca acccgcgcga cagtccctca gccaagggca
      301 gattgaggat ctgcgtttgg cggtctcgaa gatgacaggc gctgagcgct gtgccttcat
      361 ggcggagatg ggactgaaat actgcggcgg cggtgcccgg ctggccgaga cggtgtttgg
      421 ctgggggcgc gagactgttg agagggggct ggccgagaga cgcacggggc taatttgttt
      481 tgggggggca atcggcgtac tgcggtcgcc aacgctggga agagaggcag ccggagacgg
      541 ctacagcact gtgccagttg gctgaggcac acgcgcaaca ggacccgagc tttcgcacgg
      601 tgctgggcta tacccgtttg acggccaagg cagcgcggga agcgctgctt agccagggct
      661 ttggcgagga gcaactgccc tcggccagca ccatggcggg ggtattgaat cgtatgggct
      721 atcggctgcg caaggtggtc aaggccaagc cgcgcaagaa gctcaaggag accgatgcca
      781 tcttcgacaa cctcaaaaaa aagaccacca ggcgctggag gcgggcaaca tcaaacgcct
      841 gagcatggac tgcaaagcgc gacggtggcg atcggggaat tctcccgcgg ggggctgacg
      901 cggggcgaca acaaagcctg cgaccacgat tttagcgacc aagaaaaata ccccccctgt
      961 gggattatcg acgaagatag tggccaactg gtgatcacct ttggtagctc ctttaagacc
     1021 agcgacttca tcgtcgatac cctaagcgct tggtggaccg gcttgagtac ccaagagcaa
     1081 accgccaccc caggggtcca aattaaaatg gacaacggcc cggaaagcag cgccgtacgt
     1141 acccaatttc tgaaccgcat agtgcagttt gccgaccgga tcggcaaacc gatccagctg
     1201 ctgtattatc cgccctacca cagcaagtac aatcccattg agcgctgctg gggtatcctg
     1261 gaactacact ggaatgggac caagctagtc gatgtccaaa ccatgctggc atgggcacag
     1321 agtatgacgt ggaaagggat tcatcccctg gtggaactca gccacactct ctaccaaaga
     1381 ggtgtgtcgc tgagcaaggc ggcgatgcgc gtggtggaag cgcgcttgga gcgcaatcca
     1441 ctattaccca actgggacat tctgattcgc ccggtggcgc cagcatagtt agggatgttc
     1501 tttatgagaa atcgcccaac tcataggcaa ggataaagat gctaagtgcc gcatatccgg
     1561 cccaatgtct ggtcaaatcg agctgttgcc cagtctctgc caatgcccct tgagaccaca
     1621 gcccaagcag cagccagaga agccaaggta gtttgggaga gagaaggtt
//
LOCUS       DASQSL010001298         1267 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_197352, whole genome shotgun sequence.
ACCESSION   DASQSL010001298 DASQSL010000000
VERSION     DASQSL010001298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1267
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197352"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            263..>1267
                     /locus_tag="VE844_13350"
     CDS             263..>1267
                     /locus_tag="VE844_13350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009961787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC02291.1"
                     /translation="MYLKCHRRFKDGKEHRYWSIAEKRRCAGGRMVDRHVLYLGEING
                     SQKEAWLRCIEVFDESKGAQMRLALFPAETPVPDQTRTGGIQVCLSDFKLRRPRQWGA
                     CWAFCQLWEYLGLDKFWRTRLPTSREGTSWYHVLMVLTAYRLIDPGSEWRLHRHWFEH
                     SAMGDLLGEDFAIVAKDTLYRCLDKVLSHKDALFGHLRGCWQDLFGVKFEVLLYDLTS
                     TYFESSPPGSDEDKRRFGYSRDHRPDCVQVVIALGVTVEGFPLAYEVLAGNTADRKTL
                     EDFLNTIEKRYGRAHRIWIMDRGIPTEEHLENMRARHISYLVGTPKGRLTKLEKALAT
                     L"
BASE COUNT          264 a          302 c          402 g          299 t
ORIGIN      
        1 acaggctcca tgagccatgg ccaggcgcac agccgagagg cgggagccct ggtcaatgac
       61 acgcgcactg acttgccata aggctaatcg gccctcttgg cctgggccta acctaacttt
      121 cgcaactcac cctcacaaac catcaatttc agccgtttga cgcacctaac tgattgaaag
      181 gcaaagtcat ggtttttcga ttttcgcatg ggacagatct tgcttcttgt cataggataa
      241 aggcgcgttt actgtagggg ccatgtatct gaaatgtcat cggcgattta aggatgggaa
      301 ggagcatcgt tattggagta ttgcggagaa gcggcgttgt gcagggggtc gtatggttga
      361 tcggcatgtg ctctatctgg gcgagatcaa cggtagccaa aaggaagcgt ggttacgctg
      421 catagaggtt tttgatgaaa gcaagggagc gcaaatgcgg ctggccttgt ttcctgcgga
      481 gacaccggtt ccggatcaga cgcggaccgg cggcattcag gtatgcctta gcgatttcaa
      541 gttgaggagg ccgcgacaat ggggggcgtg ttgggcgttt tgtcagctat gggagtactt
      601 ggggctggat aagttttggc gtactcgcct acccaccagt cgtgagggca cgtcgtggta
      661 tcacgtgctg atggtactga cggcctatcg tctgattgat ccgggcagtg agtggcgctt
      721 gcatcgacac tggtttgagc acagcgcgat gggggatctc ttgggagagg actttgcgat
      781 cgtggccaag gataccttgt atcgctgcct ggacaaagtg ctttcgcata aggacgcgct
      841 ctttgggcat ctgcgggggt gctggcagga cctgttcggg gtgaagttcg aggtactgct
      901 ctatgacttg acgagcacgt atttcgagag cagtccgccc ggctctgacg aggacaagcg
      961 tcgcttcggt tatagtcggg atcatcgccc cgattgtgtg caagtagtga ttgcgctggg
     1021 ggtgacggtt gagggttttc cactggccta cgaggtgttg gcgggcaaca cggctgaccg
     1081 caagacactt gaggacttcc tgaacacgat cgaaaagcgc tatggccggg cacaccggat
     1141 ctggatcatg gatcgtggca tccccaccga ggaacatttg gagaacatgc gtgctcgcca
     1201 tatctcttat ctcgtcggca cgcccaaggg gcgcttgact aagcttgaaa aagccctggc
     1261 cactttg
//
LOCUS       DASQSL010001299         1248 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_63487, whole genome shotgun sequence.
ACCESSION   DASQSL010001299 DASQSL010000000
VERSION     DASQSL010001299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1248
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63487"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..952
                     /locus_tag="VE844_13355"
     CDS             <1..952
                     /locus_tag="VE844_13355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02292.1"
                     /translation="TATHGGLSLEWCATICHISPMALYRLICALGQHSLVAVLVKCHL
                     SLPTYILADEKHSRCLTERVYLPTIVSGRVIWHLGYSDSKSAAAFTASYGQFQQAALD
                     HEPSYQVQGVLIDGFDSTVNSMGTLFPGARLGFCLRHALNKLPDKLVGVAASLRRRLR
                     SKFHALLHRCRQRKSLRVVALGQCLRHFANRIDSTVGEEHGERIRHWFKTKKAGWYAV
                     LEDPKMPAMSTVLDQAHNAMDRELFAMKGFHHPGGSQAAFLTGLAHLSNLMPYQRRAL
                     NAGKCGVEVEGGILPTSDWMLNLQILTSGGYRCAPAPPNH"
BASE COUNT          262 a          369 c          340 g          277 t
ORIGIN      
        1 gaccgccacc catggcggcc tcagtctgga atggtgcgcc accatctgcc atatctcacc
       61 gatggccctc tatcgtttga tttgtgctct ggggcaacac agcctggttg cggtactggt
      121 caagtgccat ttgtcgttgc caacatacat cctggccgat gagaaacaca gccgctgcct
      181 caccgagcgg gtttatctgc ccaccattgt cagcggtcgt gtcatctggc atctgggcta
      241 cagcgactcg aaaagcgctg cggcattcac agcgtcctat ggccagttcc aacaggcggc
      301 ccttgaccat gagccctcgt accaggtgca gggtgtcctc atcgacggct ttgacagcac
      361 ggtcaacagc atgggaaccc tgtttccagg agcgcgactg gggttctgtc tgcgccatgc
      421 gctcaacaag ctgccggaca agctggtcgg tgttgcggct tcgttgcgcc ggaggttgcg
      481 ttcgaagttc cacgctttgc tgcaccggtg tcgacagcgc aaaagcctgc gcgtggtagc
      541 attgggccag tgtctgcgcc actttgccaa tcgcatcgat tcgacagtgg gtgaagaaca
      601 tggcgagcgc attcgccact ggttcaaaac caaaaaggcg ggctggtatg cggtactcga
      661 agaccccaag atgccggcca tgagcacggt tttggatcaa gcgcacaacg ccatggaccg
      721 cgagctgttt gcgatgaagg gattccatca tccgggtggt agtcaggcgg cgtttctcac
      781 cgggctggcg catctctcca acctgatgcc atatcaacgc cgggccttga atgcaggcaa
      841 gtgtggggtg gaagtggaag gcggcatctt accgacgtca gactggatgc taaacctgca
      901 aatcctcacg tcaggcggct atcggtgtgc gccggcacca cccaaccact aaatcaactg
      961 gaatgtgtct ttttcctcta tactcccttc accggaaaaa tgctccaaga cgttttagat
     1021 cgactccggc acgaagccca aacccgccct atcacggttg ctgcctacgg cccctgcacc
     1081 cgtgacgtcg cccaacaacc ctggttgaac ctctgtcaac ctcctcaggg tttgcaagat
     1141 cacttgttgg ctctgtttac gactcataaa agaaaatgaa ggccttgatc accagggcaa
     1201 tcgcattatg attcccctta atctacgtag atgatcggct ttggggta
//
LOCUS       DASQSL010001300         3574 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_104304, whole genome shotgun sequence.
ACCESSION   DASQSL010001300 DASQSL010000000
VERSION     DASQSL010001300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3574
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104304"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..233)
                     /locus_tag="VE844_13360"
     CDS             complement(<1..233)
                     /locus_tag="VE844_13360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02293.1"
                     /translation="MVKLNSEGDGAFPAGYELLKPWIGHVQVKDVKRLPDGTSTSVRF
                     GMGDVDYRGQPVHGNPLAHRQYDTERCRAPAARP"
     gene            complement(227..745)
                     /locus_tag="VE844_13365"
     CDS             complement(227..745)
                     /locus_tag="VE844_13365"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02294.1"
                     /translation="MFVDETGFSFRAKTGTTWAPKGQTPVLRRVSKRRALSTVIGLTL
                     SGRIYKRHFAHAIGGEDIVVALHHFQRYIPGPLIIIWDRLNAHRATVVTEHVEAHPEI
                     EVHWLPPYAPDLNPEEGCHGHVKQHLRHALPADLGDLRAGVDRGFARLRRRPDLILGF
                     FRHAGLDVNQLW"
     gene            793..1008
                     /locus_tag="VE844_13370"
     CDS             793..1008
                     /locus_tag="VE844_13370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02295.1"
                     /translation="MHEPGLHQGSISLPGIDRGVLRAPSQRLQSTRQVMRMVVHPEGH
                     QNHRTDAQERPTIGVKASLEGAVLEDR"
     gene            complement(1456..3114)
                     /locus_tag="VE844_13375"
     CDS             complement(1456..3114)
                     /locus_tag="VE844_13375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02296.1"
                     /translation="MFHKYNVAMSRDLEVWISINKSKLFYDSDWAGAAEEIIKGQVVA
                     LRDNKNVVGYFIDNELDWKGDFGGAGHYFDGLERDNPNRREVMKVIQGVWESVEAFNK
                     DWEVHLHSWEDLEGWEELPRQPASAHVKLASAWVYHLARDYFKLTTELIRRYDPHHLI
                     LGARYRGGAPVELFSASRGLTDVQSINIYAADAQLDRELFEAMYHQAQQPIVISEYAF
                     HALDGRSGNKNFSGFIWGHVIDQQARADGYRLFTTRMARVPYIIGADWFQWNDEPPSG
                     REDGEDVNFGVVDVHDKPYKKLVKAIRATRPWLNKLHATSAGGGGEDMWKASAGERPV
                     FDVPYMKGSMSIDGSLDEWPEQSSLGDLPYVQKVGIERSDELVSPKVFLGWSEEGIYI
                     GVQVYDKEIQSFAIDEIPREHIWRAKSFDYVELWFSTRLVEPGQKWYDQYCRNFIFLP
                     NVKQASGGTVVQWHQPGDAIADHIVDGSDIKYAARMWKNGYTLEMVVPAKMLKGFDPV
                     NAPEMLGNVFVRNWQDAIDYYWAATEFGGPNTWGVLRLSGGRGK"
     gene            3283..>3574
                     /locus_tag="VE844_13380"
     CDS             3283..>3574
                     /locus_tag="VE844_13380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02297.1"
                     /translation="MRDRIEKLLLTLRRDKPPHATLGLCDTPEPCLSPNLLELICPAN
                     SECPKRKHDANRQNHTAKAHFRRSLHFSAPQVMEALVAAQNWDRHQPQSEGLQ"
BASE COUNT          751 a         1159 c          883 g          781 t
ORIGIN      
        1 ggccttgcgg ctggcgcacg gcatctttcg gtatcgtatt gccgatgcgc cagtgggttt
       61 ccatggacag gctgcccgcg gtaatcgaca tcccccatac cgaacctgac gctcgtcgac
      121 gtaccatcgg gcaagcgctt cacgtctttg acctgcacat ggccaatcca gggcttgagt
      181 aactcgtagc ccgctgggaa cgcaccgtcg ccctcgctat tgagcttcac caaagttggt
      241 ttacatcaag cccggcatgc cggaagaatc ccaggatgag atcgggacgc cggcggaggc
      301 gggcgaagcc gcgatcgacc ccagcacgaa ggtcgccgag gtcagcgggc agcgcatggc
      361 gcaggtgctg cttgacatgg ccatggcacc cctcctcagg attcaggtcc ggggcgtagg
      421 gcggaagcca gtgcacctcg atctcaggat gtgcctccac atgctctgtg accactgtcg
      481 cgcgatgggc gttgagccgg tcccagatga tgatgagggg acccggaatg tatcgctgga
      541 agtgatggag ggcgactacg atatcttctc cgccgatggc atgtgcgaag tgccgcttgt
      601 agatgcggcc agacagggtc aacccgatca ccgtggaaag tgcacggcgt ttgctgacgc
      661 gtcgcaggac cggtgtttgc cccttcggag cccacgtggt ccctgtcttg gcccggaagg
      721 agaagccggt ttcatcgacg aacatgatct ccgcctgttg acggcgagcc tttgtttaat
      781 ctgaggccaa tcatgcatga gccaggcctg caccagggca gcatctcgct cccgggcata
      841 gaccgcgggg tgctgcgggc tccatcccag cgccttcagt cgacgcgcca ggtaatgcgg
      901 atggtagtgc accccgaagg ccaccagaat caccgcacgg atgcgcagga gcgtccaacg
      961 atcggtgtca aagccagcct tgagggcgcc gtccttgagg accgctagca cgcgctgcca
     1021 ctgttctacg ttcaggcggg ccgggcgacc tggaataggg cgtgtgtgca agctggtcat
     1081 atcgccctgg tgttggtgga gttgtcgagc ccacttgccg acggccatcc gactgacacc
     1141 cagtcggcgt gcaatgtcag cgtaagagaa ctgaccggcc tggagcagcc gtccagcttc
     1201 caggcgtcgt tcttcacgtt ggctacgggt gagctgtctt gggcgccata tcatggccgc
     1261 ccattgtaaa ctaatttagg tgaaactcaa taacttgtcg ctggcgcgaa attcgcaatt
     1321 gctgaaatct tcgggattta ggatttagtg atcctctcag actgtccata catagactac
     1381 accatcatcg cacccgtaag tgtataccac cgcggaagtt accccgagag atacagtagg
     1441 tataagagcg tcactctatt tgcctctgcc tccgctaagt ctcagcactc cccatgtatt
     1501 tggcccgcca aactccgtcg cagcccagta atagtctatc gcgtcctgcc agtttcgaac
     1561 aaaaacattg cccaacatct caggcgcgtt gaccgggtca aaccctttca gcatcttcgc
     1621 cggtacaacc atctccaacg tatagccgtt cttccacatc cgcgccgcgt attttatatc
     1681 gctgccgtcc acaatgtggt ctgcaatcgc gtcacccggc tgatgccact gtactaccgt
     1741 ccctccgctg gcctgcttga cattcggcag aaaaataaaa ttacggcaat actggtcata
     1801 ccatttctgc ccgggctcga ccagccgtgt cgaaaaccac agctccacgt agtcaaaact
     1861 ctttgcccgc cagatgtgct cacgaggtat ctcatctatg gcaaaactct gtatctcctt
     1921 atcgtacacc tgcaccccga tatagatccc ttcctccgac cagcccagaa acaccttcgg
     1981 cgacacaagc tcatccgacc gctcaatgcc gaccttttgc acgtacggaa ggtcgcccag
     2041 gctggactgc tcgggccact cgtccaaaga tccgtctatg ctcatgctcc ctttcatata
     2101 gggcacatca aatacaggtc tctcccccgc agacgccttc cacatatcct cccccccgcc
     2161 gccggcactt gttgcatgca gcttgttcag ccaaggcctc gtcgcccgaa tcgccttgac
     2221 gagcttcttg tatggcttgt cgtgcacgtc caccacgccg aaattgacgt cctccccgtc
     2281 ctcccgtccc gacgggggct catcgttcca ctgaaaccag tccgccccga tgatatacgg
     2341 cacccgcgcc atccgcgtcg tgaaaagcct gtacccgtca gccctggcct gctggtcgat
     2401 gacgtgaccc catataaaac cgctgaagtt cttgttcccg ctcctgccgt ccaacgcatg
     2461 aaacgcatat tccgatatca caatcggctg ctgcgcctgg tggtacatcg cctcgaaaag
     2521 ctctctgtct aattgggcat ccgccgcata aatgtttatc gactgaacgt ccgtcaaacc
     2581 gcgggatgcg ctgaacagct ccaccggcgc accacccctg tagcgagcgc ccagtatcaa
     2641 atggtgtggg tcatacctgc gaatcagttc ggtcgtcagc ttaaaataat ccctcgccaa
     2701 atgatagacc catgcactgg ccaatttcac gtgtgcgctc gcaggctgcc tcggcagttc
     2761 ttcccatccc tcaaggtctt cccagctatg caaatgcact tcccagtcct tgttaaatgc
     2821 ttcgacgctc tcccatacgc cttgaatgac tttcatcact tcccggcggt tcggattgtc
     2881 gcgctctaga ccgtcgaaat aatgccccgc tccaccgaag tcgcccttcc agtccagttc
     2941 attgtcgata aaatacccca cgacgttttt gttgtcccgc agtgccacca cttgcccttt
     3001 aatgatctct tcagcagcac ctgcccaatc gctgtcatag aaaagcttgc tcttgtttat
     3061 cgagatccat acttccaaat cacgcgacat ggcgacgtta tacttgtgaa acactcggct
     3121 gcaccacgct cccaaaccct taaatccggc cccatgtacc cgcttaagcg tcttggccgc
     3181 ccacacatca tggttcccgc cttctctgta tggcccgcca ttccagtccc gcgaaacaaa
     3241 atgcggccct gcctgggcgc tgcctctctg ggcaggatgg acgtgcgtga ccgtattgag
     3301 aaactccttc tgaccctcag gcgagacaaa ccaccacacg ccaccctcgg tctgtgcgac
     3361 acgccagaac cctgcctttc cccgaacctc cttgaactga tctgccccgc caacagcgaa
     3421 tgccccaaac gcaaacacga tgcaaatcgc caaaatcata cagccaaagc gcattttcgt
     3481 cgttctcttc atttttctgc tccacaggta atggaagcat tagtcgctgc gcaaaattgg
     3541 gatagacacc aaccacagag tgaggggttg caat
//
LOCUS       DASQSL010001301         1702 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_131863, whole genome shotgun sequence.
ACCESSION   DASQSL010001301 DASQSL010000000
VERSION     DASQSL010001301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1702
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131863"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(34..1467)
                     /locus_tag="VE844_13385"
     CDS             complement(34..1467)
                     /locus_tag="VE844_13385"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HZC02298.1"
                     /translation="MNSSEIVKLTISELAPKIKSREISPVEVTEAALDQANRFKPRLN
                     SFITLLLEQAMSQAREQEAALMRGEYHGPLHGIPIGIKDNLATAGIRTTVGSKVLAEH
                     VPSEDAYAVSRCKEAGAIILGKENLEEFAAGSTSNNLHYGAVHNPWDLERIPGGSSGG
                     GGANVAACVTFASLGTDLGGSVRGPANYCGIVGMKQTFGRVSQRGLMVTSFNGDRIGP
                     LTRSVADSALMLQTIAGYDPLDPSTVPVPVPDFSARLGQSLQGLKMGVPTNYYFDLVD
                     PEVEDSVRRAITALEELGVETKEVALPSMQYAGALRIAAMADSVVTHEPYIEKGRADY
                     GPTVLYRTLAGQFVLGRDYSKALKVQRIIKEEYARVLQQVDFLVTPSSPVAAWRIDAE
                     TVSLNGVEYPTRGPGSGMTSRCTSPSNATGLPAMSIPCGFTREGLPIGLQLIGRAFEE
                     PLLYQVAHAYEAVSPARERRPAIVDTV"
     gene            complement(1460..>1702)
                     /locus_tag="VE844_13390"
     CDS             complement(1460..>1702)
                     /locus_tag="VE844_13390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02299.1"
                     /translation="LHSVNHAGPWEVSGMEISRDTLKAMLRDYGGFPLSDAELELIQP
                     ELDNYLAEVEKLRGLDLSNVMSSRLLRAQEGDQTHE"
BASE COUNT          322 a          508 c          516 g          356 t
ORIGIN      
        1 acattgtttc ttcccaggct gcttaactgg ggactaaacc gtgtctacga tggctggtcg
       61 gcgttcacga gccggcgata ccgcttcgta agcgtgagcg acctggtata gcagcggttc
      121 ctcgaaggcc cgtccgatta gctggaggcc aatgggaagc ccctcccggg taaacccgca
      181 gggaatcgac atggcgggca ggccggtggc attgctgggg ctggtgcagc gggaagtcat
      241 tcccgaaccc ggacccctag taggatactc tactccgttc aaagataccg tctctgcgtc
      301 aatccgccag gcggctaccg gtgaagacgg cgtgaccagg aagtccacct gctgaagcac
      361 ccgggcgtac tcctctttta taatgcgttg caccttcagg gccttggaat agtcccttcc
      421 caggacaaac tgccccgcca gcgtgcggta caggacggtg ggaccgtagt ccgcgcgtcc
      481 tttctcgatg taaggctcgt gggtgacgac gctatcggcc atggccgcga tgcgcaaggc
      541 tccagcgtac tgcatgctgg gtaaggccac ctccttggtc tccactccta actcctccag
      601 ggcagtgatg gcccggcgga ccgagtcctc cacctccggg tccaccaagt cgaagtaata
      661 gttggtgggg actcccatct tgaggccttg caagctctgg cccagcctgg cggagaagtc
      721 cgggaccggc accggcactg tgctggggtc cagggggtca tacccggcaa tagtctgaag
      781 catcagagcg ctatcggcca cagagcgggt caatgggcca atgcggtcgc cgttgaagct
      841 ggtcaccatc aggcctcgct ggctcacccg gccgaaggtc tgcttcatcc ccacaatgcc
      901 acagtagtta gccggaccgc ggactgaccc gcccaggtcg gtacccaaag aagcgaaggt
      961 gacacaggcg gccacgttgg cgccgcctcc tccactggag ccgccgggga tgcgttccag
     1021 gtcccaggga ttgtgtaccg ctccgtagtg caggttgttg gaggtggaac cggcagcgaa
     1081 ctcctccagg ttctcctttc ccaggatgat ggccccagct tctttgcacc gactgaccgc
     1141 gtaagcgtcc tccgagggga catgctcagc cagcacctta gagccaacgg tggtgcggat
     1201 gcctgccgtg gctaggttgt ccttgatgcc tatgggtatg ccgtgcagcg gcccgtggta
     1261 ctctccccgc atcagggctg cttcttgctc cctggcttga ctcatggcct gctcgagaag
     1321 gagggtaatg aaagagttta gccggggttt aaatctgttg gcctggtcca gggctgcttc
     1381 agtgacctct accggggaaa tctcccggga cttaatcttg ggagctagct ccgagatggt
     1441 gagcttgacg atttctgagc tattcatggg tctgatctcc ttcctgggca cgcagtagac
     1501 gagaagacat cacgttggaa aggtccaggc cccgaagttt ctctacttcc gccagatagt
     1561 tatccagctc aggttgaatg agttccagct ccgcgtcgga aagagggaaa ccgccgtaat
     1621 cgcggagcat cgccttgagg gtgtctctag atatttccat tccgctcacc tcccaggggc
     1681 cagcatgatt tacggagtgt aa
//
LOCUS       DASQSL010001302         1051 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_23972, whole genome shotgun sequence.
ACCESSION   DASQSL010001302 DASQSL010000000
VERSION     DASQSL010001302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23972"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(286..810)
                     /locus_tag="VE844_13395"
     CDS             complement(286..810)
                     /locus_tag="VE844_13395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02300.1"
                     /translation="MLSSSLVRLGGLASMLAGVVFLVDEILGLMNPAPYLDVMFVVAM
                     LFVLARMVGFHALQQGHYDRLGWAGFYAIVVGVLAQVLGLVFLLSGSMALLWLLPVAT
                     LAVLVGFAIYGVATLRARVLPRWSGVALIVAFPAAIALGTYAYFWLGLVWLALGYVLW
                     RQRGTATERSARVS"
BASE COUNT          243 a          342 c          287 g          179 t
ORIGIN      
        1 tgctaccata agggcttgca tctcgcagaa agaggcaatc gccttggcgt gagccgttag
       61 gcaaagatta gctcacggca actacctggg cgcggtagcg tgatacctgt gaaacccctg
      121 cttaatactc agaaatctac cgcgcgatcg gctttcgcat ggtatcgcgc gattcgcgcc
      181 ctaatccggg tgcgggcagt accgcgcgta cggcgcggaa gcgcgcaaat ctaatctagg
      241 accttgaggt gaagggggga ttcttcatga cttggatagc ggtgcctaac tcacgcgcgc
      301 ggaccgctca gtagccgtgc ctctctgcct ccagagcacg taccccagtg cgagccagac
      361 gagaccgagc caaaagtagg catacgttcc caaggcaatc gcagcgggga acgccacgat
      421 gagcgctacg ccgctccagc gcggcaacac cctcgctcgc agggtggcaa ccccgtagat
      481 cgcgaacccg accaaaacgg ctaaggtcgc caccggtagt agccacagga gcgccatgct
      541 ccccgacagg aggaatacta agcccaacac ctgggccaag accccgacga cgatcgcgta
      601 gaagcccgcc cacccgaggc ggtcgtagtg cccttgctgc aaggcatgga accccaccat
      661 tcgcgccagc acgaagagca tcgcgacgac gaacatgacg tccaggtagg gggctgggtt
      721 catcagacca aggatctcat ccaccaagaa caccacgccg gccagcatag acgccagccc
      781 tcccaaccgt accaggctag acgacaacaa cgaggtctcc tccctgcctg ctttgcgccg
      841 gtgcccattt tggatgagcg cttgaggttc tgcacagata agcacgggag gatcggaaga
      901 agactttacg cgattcctcc ttcaaagcca ccttaaaccc ccttcagcca aagcggtgcc
      961 tttcgtgacc ctctcttatc ccgctagttc tcgtagcctt aatatcactt tacgcaccag
     1021 cggcgggaga atggccgtgg gcacctctcc t
//
LOCUS       DASQSL010001303         1287 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_146747, whole genome shotgun sequence.
ACCESSION   DASQSL010001303 DASQSL010000000
VERSION     DASQSL010001303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1287)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1287
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146747"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            25..>1287
                     /gene="ligA"
                     /locus_tag="VE844_13400"
     CDS             25..>1287
                     /gene="ligA"
                     /locus_tag="VE844_13400"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017888964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HZC02301.1"
                     /translation="MDRREAERQIEVLRQQLHYHNHRYYVLDDPEIDDAEYDQLMQRL
                     QELETLFPELVTSESPTQRVGAAPVAAFGTVMHSIPMLSLDNAFAPNEIREFDARIKR
                     QIGLSAAVEYVAEPKIDGLAVELCYEDGMFIQGSTRGDGIRGEDVTQNLRTVRTIPLR
                     LRAQAEHPIPRRLEVRGEVYMTKRDFQQLNARRTEEGIPTFANPRNASAGSLRQLDPR
                     ITAGRPLTLFCYGVGRLEGVTFRTHWEMLQALSHWGFKVNPLRQRCTGIEEALAYYTR
                     LREQREELAYEIDGVVIKVNALELQESLGSRSRSPRWAIAYKFEPRTAVTKVKEISVQ
                     VGRTGALTPVALLEPVRVAGVEVSRASLHNPDEVARKDVRTGDWVVIQRAGDVIPDIV
                     EVLKERRTGDEKPFQMPDHCPICGSAVVR"
BASE COUNT          280 a          366 c          394 g          247 t
ORIGIN      
        1 tcataacttg gtgaggagag aaggatggat cggcgcgagg ccgagcgtca gatcgaggta
       61 ttacgtcaac aactccacta ccacaaccat cgctactacg tgctcgatga tccagaaatc
      121 gacgacgccg agtacgacca actcatgcag cgtctgcagg agctggagac gctctttccc
      181 gagctcgtta cgtctgagtc tccgacgcaa cgcgtggggg ctgcaccggt cgctgcgttc
      241 ggcaccgtca tgcattccat tcccatgcta agcctcgaca atgcctttgc gccgaacgaa
      301 atccgtgagt tcgacgcgcg aatcaaacgg cagattgggc tcagcgcggc agtcgaatat
      361 gtggccgaac ctaaaattga cgggctggcg gtggaattat gctatgaaga tggcatgttt
      421 atccagggtt cgacgcgtgg agatggaata cgtggagaag acgtcacaca gaatctgcgc
      481 acggtcagga ctattcccct gcgacttcgt gcccaggccg agcaccctat tcctcgccgc
      541 ctcgaagtgc gtggcgaagt ctacatgacc aagcgcgatt tccagcagtt gaacgcccgt
      601 cgcacggaag aggggatacc cacattcgcc aatccgcgta atgcgtcagc gggatcgtta
      661 cgccagctgg acccccgtat taccgctggg cgacccttga cgctcttctg ctatggcgtc
      721 ggacgcttgg aaggcgtaac cttccggaca cattgggaga tgctgcaagc cctatcccat
      781 tgggggttta aggtgaaccc attgcgtcaa cgatgcaccg ggatcgaaga ggcgctggcg
      841 tattacaccc ggttgcgcga acaacgtgag gagctggctt atgaaatcga tggggtagtg
      901 atcaaagtca atgcgcttga gctccaagag agcctgggga gccgctctcg cagtccacgc
      961 tgggccattg cctacaaatt cgagccccgc acggcggtga ccaaggtcaa ggagatcagc
     1021 gtgcaggtcg gtcgcaccgg ggcattaacc cctgtagcac tgctagagcc ggtgcgggtg
     1081 gcgggggtgg aggtcagtcg cgccagcctg cacaatcccg atgaggtcgc acgcaaggac
     1141 gttcgcacag gtgattgggt ggtgatccag cgcgccggcg atgtcatccc ggacatcgtc
     1201 gaagtgctca aagagcgtcg gacgggagac gaaaagccct tccagatgcc cgaccattgc
     1261 cctatctgtg gctccgccgt ggtgcgt
//
LOCUS       DASQSL010001304         1003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_90079, whole genome shotgun sequence.
ACCESSION   DASQSL010001304 DASQSL010000000
VERSION     DASQSL010001304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90079"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(189..941)
                     /locus_tag="VE844_13405"
     CDS             complement(189..941)
                     /locus_tag="VE844_13405"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZC02302.1"
                     /translation="MADERGTPERERPIARVTVTTDAELLPAVVYFVRQVAHRIGLRD
                     IAAEHLDESVETLCRNVIEHAFGPDEEGQYDVIVLHRPAQVVIAVEDRGLPFDYARLT
                     DGGDTALPEMLHRSFAEEVRFINLGRGGNRVELIKHLPHADVRGQLSEDDHHQTIRAA
                     AAPEDTPLEIRIMRPEESFELSRCMYRFYGYSYLWDFVYYPERVRALQESDLMRSCVA
                     VTQENEFVGHLAVRLEHPNSCVGEAGQAVAPR"
BASE COUNT          204 a          311 c          287 g          201 t
ORIGIN      
        1 cttgctaatg taccctgaga aaagcttgcg gagaccactt tgcgcctatt gcaaaacagg
       61 ttctagaagg tgtctgaaaa gggttgatgt aggcggccaa ggaccacccc acgccactgc
      121 cctgtaggac gcccttacga ctaaagtccc gcgaggaatt tggtcctcgg ccgattccaa
      181 cgaccgatct agcgaggggc aaccgcctgc cccgcttctc caacgcacga gttgggatgc
      241 tcaagcctca ctgccaagtg cccaacgaac tcattttctt gtgtcaccgc cacgcaggag
      301 cgcataaggt cgctctcctg cagtgcgcgg acgcgctcag ggtagtagac aaaatcccag
      361 aggtagctgt acccataaaa gcgatacatg cagcgtgaga gctcgaagga ttcctccggc
      421 cgcattatgc ggatctccaa cggtgtgtct tccggtgcgg cagccgcccg gatggtctgg
      481 tggtgatcgt cctccgagag ctgcccgcga acatcggcgt ggggcaggtg cttgatgagc
      541 tctacccggt tgccaccgcg ccccaggttg atgaagcgga cctcctcggc gaacgagcgg
      601 tgaagcattt ctggcaaggc tgtgtcccca ccgtctgtaa ggcgagcgta atcgaagggt
      661 aggccccgat cctcgaccgc gatcaccacc tgcgcggggc ggtggaggac gatgacgtcg
      721 tattggccct cctcatccgg tccgaacgcg tgctcaatga cgttgcggca aagtgtttca
      781 acagactcat ccagatgctc ggcggctata tccctcagcc cgattcggtg ggctacctgc
      841 cgcacgaaat acactacagc cggtaggagc tcggcatcgg ttgtcaccgt gacgcgagcg
      901 atgggtctct cgcgttccgg cgtgcctcgt tcatccgcca caggccgtgc ctcccttaac
      961 ttctcatcag cgcaaagact aactcgccaa ttctaaccgt gtg
//
LOCUS       DASQSL010001305         1301 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_104339, whole genome shotgun sequence.
ACCESSION   DASQSL010001305 DASQSL010000000
VERSION     DASQSL010001305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1301
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104339"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(126..242)
                     /gene="rrf"
                     /locus_tag="VE844_13410"
     rRNA            complement(126..242)
                     /gene="rrf"
                     /locus_tag="VE844_13410"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(310..>1301)
                     /locus_tag="VE844_13415"
     rRNA            complement(310..>1301)
                     /locus_tag="VE844_13415"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          262 a          426 c          339 g          274 t
ORIGIN      
        1 cgcgatcaac ctacgaaaag gactgtcgcg agaagctgca ggccgcgtac gtgacgaccc
       61 gcgcgacggg cgcggtcggc gtgcgaaaag aaaagggccg cttcaagcgg ccctgacgtt
      121 cagaatcccg gcggcgtcct actctcccgg gaggtttccc tccgagtacc atcggcgctg
      181 gcgggcttaa cttctctgtt cggaatggga agaggtgttt ccccgccgct atgaccaccg
      241 gaaactgcga gttctcgcgg acgttcgcac gcgcgcgacc ctcaaaactc catagcgact
      301 aacggtgttc aaatcaagac ctcgggtcat tagtacgggt ccgcttcacg cattgctgcg
      361 cttccacgtc ccgcctatca acgtggtggt ctcccacgac ccttactccc tctaggggat
      421 gggaagcctc atctcgaggt gggcttcccg cttagatgct ttcagcggtt atcccgtcca
      481 gacgtggcta atcagcagcg ccgttggcac gacgactgat acaccagagg tctgttcgtc
      541 ccggtcctct cgtactaggg acgactcctc tcaagcctcc aacgcccatg gtggataggg
      601 accgaactgt ctcacgacgt tctgaaccca gctcgcgtac cgctttaatg ggcgaacagc
      661 ccaacccttg ggacctactc cagccccagg atgcgacgag ccgacatcga ggtgccaaac
      721 cctcccgtcg atgtggactc ttggggagga taagcctgtt atccccggag taccttttat
      781 ccgttgagcg acggcaattc cactcttaac cgccggatca ctaaagcctg ctttcgcacc
      841 tgctcgacat gtctgtctcg cagtcaagct cccttctgct tttacactct acgcacgatt
      901 tccaaccgtg ctgagggaac ctttgcgcgc ctccgttacg ttttaggagg cgaccgcccc
      961 agtcaaactg cccacctgac gctgttcccg acccggatta cggcatcggg ttagaagccc
     1021 agaacgcgaa gggtggtatc ccaaggttgc ctccacgagg gctggcgccc tcgcttcaca
     1081 ggctcccacc tatcctggac aacgcgcccc gaactccaac atcaagctgc agtaaaggtt
     1141 cacggggtct ttccgtccaa ccacgggtac tcggtatctt caccgagact acagtttcac
     1201 cggatccctc gttgagacag cgcccaagtc gttacgccat tcgtgcaggt cggaacttac
     1261 ccgacaagga atttcgctac cttaggaccg ttatagttac g
//
LOCUS       DASQSL010001306         1221 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_63545, whole genome shotgun sequence.
ACCESSION   DASQSL010001306 DASQSL010000000
VERSION     DASQSL010001306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1221
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63545"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..846
                     /locus_tag="VE844_13420"
     CDS             133..846
                     /locus_tag="VE844_13420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007917126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
                     /protein_id="HZC02303.1"
                     /translation="MSRSSSLYRRHRFPGEIISYCVWLYYRFSLSYRDIEELMAQRGV
                     RVSYETIRQWCLKFGQTIAAELRRRRPRPGDKWHLDEVYLKISGRTHYLWRAVDQEGV
                     VLDILVQSRRNKQAAKRFLGRLLTGMQYAPRIIVTDKLKSYGAAIKELKLQVDHRQHK
                     GLNNRAENSHQPTRQREGAIMRRFKSPEQAQRFLAPFGPIGEHFRPGRHRLKAEHYRQ
                     EMACRFQTWREVSGLASCG"
     gene            1042..>1221
                     /locus_tag="VE844_13425"
     CDS             1042..>1221
                     /locus_tag="VE844_13425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02304.1"
                     /translation="MKWKVAKELEGAAGLEWIRGELEAYDWTLCEWITVRRGAWGHEV
                     STYPFEERMGATNKAS"
BASE COUNT          274 a          316 c          390 g          241 t
ORIGIN      
        1 ccactgatcg gccatccgcg tagaggcgat aggccgattc tttatccgcg tggacgctat
       61 cttgcccggc ggtattgtca aggtaaggct gggatacagt aggagaggag gtctttaagg
      121 aaggaagtac ttgtgagcag atcttcatcc ctgtatcggc gtcaccgttt tccgggcgag
      181 atcatcagct actgtgtatg gttgtattac cgattctcct tgagctatcg cgatatcgaa
      241 gagctgatgg cccagcgagg agtaagggta agctacgaaa ccatccggca gtggtgcctg
      301 aagttcggac agaccatagc cgccgagctg cgtcgccgtc ggccgcgacc tggcgataag
      361 tggcacttgg atgaggtgta tctgaagatt agcggacgga cccactacct gtggcgggcc
      421 gtcgatcagg agggcgttgt gctcgacatc cttgtacaga gtcggcgcaa caagcaggcg
      481 gcgaaaaggt tcttggggcg attgctaacg gggatgcaat acgcccctcg catcatagtg
      541 accgacaaac tcaagagcta cggtgccgcc ataaaagagc tcaagctgca ggtcgaccac
      601 cgccaacata agggcctcaa caatcgggcc gagaactccc accaacccac acgccagcga
      661 gagggggcca tcatgcggcg gttcaagtcg ccggagcaag cacagcgctt cctggcacca
      721 tttggtccga tcggtgagca ttttcggccg gggcgtcacc gcctaaaagc ggagcactac
      781 cgtcaggaga tggcatgccg cttccagacg tggcgcgagg tgagcggtct ggcaagctgc
      841 ggttgaaagc gcacagtttc tcctgggaaa tcgaacgact gctataactt cgctctccga
      901 gcgttttaag ttgacaaagc catttgaggg tagctgatca agccggggct cccatcaaga
      961 tatccccggc ccccgatttc tggaggatgt tatggattgg gagaagtcag tgaagggggc
     1021 gcgctaccac gaggctggca agtgaagtgg aaggttgcca aagagctcga aggtgccgcc
     1081 ggcttggagt ggatacgcgg ggagcttgaa gcttacgact ggacgctgtg tgagtggata
     1141 accgtccgtc gcggtgcatg gggccatgag gtctcgacct acccttttga ggagcgcatg
     1201 ggcgcgacga ataaggcgtc a
//
LOCUS       DASQSL010001307         1180 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_11434, whole genome shotgun sequence.
ACCESSION   DASQSL010001307 DASQSL010000000
VERSION     DASQSL010001307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1180)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1180)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1180
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11434"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            188..>1180
                     /locus_tag="VE844_13430"
     CDS             188..>1180
                     /locus_tag="VE844_13430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012806955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC02305.1"
                     /translation="MYITTVPNRNSPPAILLREAYRENGTVKNRTLANLTHWQPARVD
                     ALRRALKGEFDGLSRDPTSGPIFGVLFALKHLADETGITQAVGKSKEATRALFLVLAR
                     IAHGGSRLSAVRWAQQHAVEDLLGLSAFDEENLYAALDWLAKEQTKIENRLYQTYVKR
                     RGQAPVLVLYDVTSSYLKGEHNELAAYGYNRDGKRGKKQIVVGLLTAADGEPLAVRVF
                     EGNTADPSTLATQIRLLKEQFQVREVVMIGDRGMIKAKGKAALSEEGLKYITALTNAQ
                     VRTLLKESVLQPELFDTPLTEVDYEGKRLIVRRNEAVRACEHHRREDKLACLREK"
BASE COUNT          286 a          316 c          328 g          250 t
ORIGIN      
        1 aagctccggc tgttgagggt cttgagggtc ttgcgctttg gcctggctct ctgtcggatc
       61 ttcctgtagc aaataccatt aacgtactga aagttaagca aaagttataa ccatgggttc
      121 taaatgtagt catgtaaata acatttacgt attgataata aaaggtgctt agtatatcat
      181 agtcggcatg tatatcacga ccgtgccgaa tcgtaattcc ccacccgcca ttctcttgcg
      241 cgaggcgtat cgcgaaaatg gaacagtcaa aaaccgtacc ctggccaatc tgacgcattg
      301 gcaaccagca cgggtcgatg ccctgcgtcg agccctcaaa ggcgaattcg atggtctttc
      361 cagggacccc accagtggcc cgatcttcgg tgtgctcttc gcgctcaagc acctcgccga
      421 tgaaaccggt atcacgcaag cagtgggtaa gagtaaggag gccacgcggg cgctcttcct
      481 cgtactcgcc cgcatcgctc acggcggctc acgcctttcc gcggtacgct gggctcaaca
      541 gcatgcggtg gaagaccttt taggcctctc ggcgtttgac gaagagaatt tgtacgcggc
      601 cctggattgg ctagccaagg agcaaaccaa gatcgagaac cgtttgtacc agacgtatgt
      661 caagcgccgt ggtcaggcgc cggtgctcgt gctctacgat gtgacttcaa gttacttgaa
      721 gggcgagcac aatgaactcg ccgcctatgg ctacaaccgc gatggcaagc gtggaaaaaa
      781 acagatcgtc gtaggtttgc tcacagctgc cgatggagag cccttggcag tgcgcgtctt
      841 cgagggcaac accgccgatc cctcgacctt ggctacgcag atccgcttgt tgaaagagca
      901 gttccaggtg cgggaagtgg tgatgatcgg cgaccgggga atgattaaag ccaaaggcaa
      961 agcggccctc agtgaagaag gcttgaaata catcacggcc ttgaccaacg cgcaggtgcg
     1021 tacgctgctc aaagagagtg tcttacaacc cgagttattc gatacccccc tcaccgaagt
     1081 ggactatgaa ggcaagcgac tcatcgtgcg gcgcaatgaa gcggtgcgtg catgtgagca
     1141 tcatcgccga gaggacaaac tggcctgctt gcgcgaaaaa
//
LOCUS       DASQSL010001308         2186 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_49369, whole genome shotgun sequence.
ACCESSION   DASQSL010001308 DASQSL010000000
VERSION     DASQSL010001308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2186
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49369"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            425..643
                     /locus_tag="VE844_13435"
     CDS             425..643
                     /locus_tag="VE844_13435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02306.1"
                     /translation="MHWYNPKTRVAETVGAPYNDEEANYMLGGTTDSWAYVAEYERLR
                     EEGMGIEQAMIFVGHCFRMWHLRYQPVG"
     gene            663..857
                     /locus_tag="VE844_13440"
     CDS             663..857
                     /locus_tag="VE844_13440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02307.1"
                     /translation="MRSEETSIGARVRVGESGLRSELRGLTGKIIGRWGHPEYLALDV
                     LMEDGSSGLFWHHELEKVPE"
     gene            932..1180
                     /locus_tag="VE844_13445"
     CDS             932..1180
                     /locus_tag="VE844_13445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02308.1"
                     /translation="MQPEQTVSEMAAEVLGRQAKARAHRSGQSLEEALAEVLKTPAGR
                     RLGELADGPHRHQKAAQWQASLIEERAAQRALEGVVPR"
     gene            1365..1760
                     /locus_tag="VE844_13450"
     CDS             1365..1760
                     /locus_tag="VE844_13450"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020545257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HZC02309.1"
                     /translation="MERRIINPWTWQDQMGYVQANDISAAQRTIFLAGQGSVDEDGAP
                     VHPEDMGAQINQTLDNLETLLREAGVGLSDVVRLNIYTTDVDRFLEAYGTVAGRLAQA
                     GCRPASTLLGVTRLAYPEMLVEIEATAVL"
     gene            complement(1897..>2186)
                     /locus_tag="VE844_13455"
     CDS             complement(1897..>2186)
                     /locus_tag="VE844_13455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010090063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GYD domain-containing protein"
                     /protein_id="HZC02310.1"
                     /translation="TYIALMNWTDQGIRTAKDTVHRRDQADALAHKHGANIEQVYWTV
                     GPYDLVSILQAPDEESATAMVLELGSAGNLRTLTLRAYDRQEMSGIIERLG"
BASE COUNT          473 a          612 c          690 g          411 t
ORIGIN      
        1 tcgcccacgt accgttggta ccgttttgta ccgttcgtac ttagtgtagt taaccacacc
       61 ccgggcatca ggaccagagc gtgcgccgct tcccgccaaa tcttcgcgac gccttagcgg
      121 cgctcttgct gcaacggggg aactagaaga tcggggcggc gcctcccctc cgtcgacgag
      181 cgccccgctc tcgggtccta tgctctcaga gaacccaagc gatgaacaca ctccgtagtg
      241 tgcagctttg ctacactcca cggaccatcc ttctcccaac cctcgccaca gccttgagtt
      301 gggccgctcg tctatcgttc acgctgatag atttgtagcc ctgggttaca aatctgtgcc
      361 tttgggtgta tcatagctgc atcttttgga taatcccttg gggaagggaa aggagtagta
      421 gtctttgcat tggtacaacc ccaaaaccag ggttgctgag accgtaggcg caccctacaa
      481 cgacgaagaa gccaactaca tgcttggagg cactacagac tcgtgggcct acgtggccga
      541 gtacgagagg ctcagagaag aggggatggg catagagcag gccatgatct tcgtggggca
      601 ctgctttcgg atgtggcacc taaggtacca gccggtcggg taaagaaagg gaagcccaag
      661 acatgagatc cgaagaaacg agcatcggcg cgagggtgcg ggtgggtgag tccggacttc
      721 gctccgagct gcgggggctg acaggcaaga tcatcggaag gtggggccac ccagagtacc
      781 tggccctcga tgtgctcatg gaggacggaa gctcgggtct gttctggcac cacgagttgg
      841 agaaggtccc ggagtagcag taggggcagg cagcgttacg caagtaggcg gggcttagag
      901 agagcacccc tgccaaggag gagtgaagac cttgcaacca gagcagacag tctctgagat
      961 ggcagcggaa gtactaggac gccaggccaa ggcccgggcc caccggagcg ggcagtcctt
     1021 agaggaagcg ttagcggagg tcctaaagac ccctgcgggc cgccgactcg gcgagttggc
     1081 cgacggcccg caccgccacc agaaggcggc gcagtggcag gcaagcctta tcgaggaacg
     1141 cgctgcacaa cgtgccctcg aaggagtagt gcccagatag gacgggttgg accaacgaag
     1201 aacttctaaa gaccctctaa agccgaactt cgcagaattc ctgttccacg cacttgggtg
     1261 aataaggtga gaatacgcca tttgggtgat ccgttggagc caggggtgca actatgatcc
     1321 gtccgttgtt ggcgccgtat ggcacctcat gaaggaggag agcagtggag cgaaggatca
     1381 tcaacccgtg gacctggcag gaccagatgg gctacgtcca ggccaacgat atcagcgccg
     1441 cccagcgcac catcttcttg gccgggcagg gttcggtcga tgaggacggc gcaccggtgc
     1501 atcccgaaga catgggcgct cagatcaatc agactctgga caacttagag accctcttga
     1561 gagaagcggg agtcgggctc tccgacgtgg tgcgtttgaa catctacacc accgacgtag
     1621 accgtttcct ggaggcatac ggcacagtcg ccgggcgctt ggcacaagct ggctgccgac
     1681 cggccagcac gctgctgggg gtgacgcgct tggcttatcc ggagatgctc gtcgagatcg
     1741 aagccacggc ggtgttgtag caactcgagg ggaccacgaa acaatacctc ctgagcgcag
     1801 ccgaatttcg gagaacgcct gttccacgca cttgggtgaa taaaggcaag aaggagggcc
     1861 gaggctgtag cgtcccggcc ctatatgcca gtgctctcag ccgagcctct cgataatgcc
     1921 cgacatctct tggcgatcgt aagcacgaag cgttagggtc cttagattgc ccgccgagcc
     1981 tagctcgagc accatcgcgg tggcgctctc ctcgtctggg gcttggagta tagagaccag
     2041 gtcatacgga ccaacggtcc agtagacttg ctcgatgttc gccccatgct tgtgggcgag
     2101 tgcgtcggct tgatcgcgac ggtgcacggt atccttggcg gtccttatcc cttgatcggt
     2161 ccagttcatt agggctatgt aggtgg
//
LOCUS       DASQSL010001309         1522 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_146781, whole genome shotgun sequence.
ACCESSION   DASQSL010001309 DASQSL010000000
VERSION     DASQSL010001309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146781"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1522
                     /locus_tag="VE844_13460"
     CDS             <1..>1522
                     /locus_tag="VE844_13460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007193838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HZC02311.1"
                     /translation="QLAHVYATERHAIRDQNAALHQMLTTMQSEPEDPGAIAITSEPL
                     LIAREQLGHAYDDRLGGFGEAPKFPQAPNLERLLRHHAASNLLTGSPDRRALEMVMFT
                     LKQMALGGIYDQIGGGFCRYSVDARWMIPHFEKMLYDNGPLLALYSEAWQLSRDPLYE
                     RIALETADWVIRDMQSPEGGFYSSLDADSEGHEGKFYVWTREEISAVLDERSYALFAR
                     CFGLDRQANFEGRWHLHVYLPPTAAAGEFGLTEAEARAILDEARRKLRAVRDSQRIWP
                     GRDEKILSSWNGLMIKGLAIAGRIFGRKDYVKAAERALDFIKVTLWREGRLLATYKEG
                     RAHLNAYLDDYVFLIDGILALLQARWRDGELAFAIELAEVLLAQFEDREAGGFFFTSH
                     DHEHLIQRIKPMADDALPSGAGIAAYVLSRLGHLLGESRYLEACERTLKAAWPAIRQY
                     PSAHNALLLALEDYLLPPEIIVLRGKRDPIAEWHKRCTEHYAPRRLSLAINEDSRDL"
BASE COUNT          312 a          439 c          461 g          310 t
ORIGIN      
        1 acagctcgcc catgtgtacg cgactgagcg ccatgcgatc cgtgatcaaa atgccgcgct
       61 gcatcagatg ctcaccacta tgcaaagtga gcccgaggat ccaggcgcta tagcgatcac
      121 ctccgagcct ctcctgatcg cgcgcgaaca gcttggacac gcctatgacg accggctggg
      181 cgggtttggg gaagcgccga aattccccca agcccccaat cttgaacggc tgctccggca
      241 tcatgccgcc agtaacctcc tcaccggcag ccctgacaga agggcgctgg agatggtaat
      301 gttcaccttg aagcagatgg cgcttggtgg gatctacgat cagatcggtg gcggcttttg
      361 ccgttattcg gtggatgcgc gctggatgat cccccatttt gagaagatgc tctacgataa
      421 tggtcccctg ctcgccctct atagcgaggc gtggcagttg agccgtgatc ctctctatga
      481 aaggatcgca ctcgaaaccg cagactgggt gatacgggac atgcaatccc cggaaggcgg
      541 gttttattcg agcctcgatg ccgattcaga ggggcacgaa gggaaattct atgtatggac
      601 ccgcgaggag ataagcgctg ttctcgacga gcgcagctac gctttgtttg cccggtgttt
      661 tggcctggac cggcaggcaa acttcgaggg tcgctggcat ctgcatgtct atttgccgcc
      721 cacggcggcg gccggtgaat tcgggctgac cgaggctgaa gcccgtgcga tcctggatga
      781 agcccgaaga aaactccggg cagtaaggga ttcccagcgg atctggccgg gacgggacga
      841 aaagatcctg agctcatgga atggcttgat gatcaaggga ctggccatcg ccgggcggat
      901 ctttggacgg aaagattatg ttaaggcggc ggagcgcgcc ctggacttca tcaaggtaac
      961 cctctggcgg gaagggcgac tgctggctac ctacaaggaa ggtcgggccc atctcaacgc
     1021 ctacctcgac gactatgtgt ttttgatcga tgggatcctg gccctgcttc aagcccgctg
     1081 gcgggatggc gagctggcgt ttgcgatcga gttggcagag gtcctgcttg ctcagttcga
     1141 agacagggag gccggcggat tcttcttcac ctctcacgat catgagcact tgatccaacg
     1201 aatcaaaccc atggctgacg acgccttgcc ctcaggcgcc gggatcgcgg cctatgtcct
     1261 ctcaagactc ggccatctcc tcggtgagtc ccgctattta gaggcttgcg aacgcaccct
     1321 gaaagcggcc tggcccgcca tcagacagta tccttccgcg cataacgcct tgttgctggc
     1381 gctcgaggac tatctactgc cgcccgagat catcgtcttg cgcggcaagc gtgatccgat
     1441 agcagagtgg cataagcgct gcaccgagca ctacgcaccg cgccggttga gcttggcaat
     1501 aaacgaagac agccgggatc tg
//
LOCUS       DASQSL010001310         1160 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_146785, whole genome shotgun sequence.
ACCESSION   DASQSL010001310 DASQSL010000000
VERSION     DASQSL010001310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1160
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146785"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1160
                     /locus_tag="VE844_13465"
     rRNA            <1..>1160
                     /locus_tag="VE844_13465"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          270 a          295 c          404 g          191 t
ORIGIN      
        1 gggtaagacc gcgtggaggc ccgaacccac cagggttgaa aacctggggg atgagctgtg
       61 ggtaggggtg aaaggccaat caaactccgt gatagctggt tctccccgaa atgcatttag
      121 gtgcagcgtc gcgtgcttct cgtcggaggt agagcactgg atgatctagg gggcctacaa
      181 gcttaccaac atcagccaaa ctccgaatgc cgatgagtca gagcgcggca gtgagactgc
      241 gggggataag cttcgtagtc gaaagggaaa cagcccagac caccggctaa ggtcccgaag
      301 cgtgtgctaa gtgggaaagg atgtggagtc gcacagacaa ccaggaggtt ggcttggagg
      361 cagccaccct ttaaagagtg cgtaatagct cactggtcaa gtgattccgc gccgacaatg
      421 tagcggggct caagcacacc accgaagccg tggcgttcgg acagtgatcc gcgtgtccct
      481 cgggatgcgt gcagtcgtcc ggacgggtag gggagcgtcg tgcggcgaga gaagcggcgg
      541 agtgatccag ccgtggacgc cgtacgagtg agaatgcagg catgagtagc gaaagaggag
      601 tgagaaactc ctccgccgaa tgaccaaggg ttcctgggcc aggctaatcc gcccagggta
      661 agtcgggacc taagacgagg ccgacaggcg tagtcgatgg acaacgggtt gatattcccg
      721 tacccgcatg agcgcgcccc tggcgaaccc ggtgatgctg accgcccgaa cctgccgatc
      781 ccttcgggga gaggcggggg agcgcgggac ccaaactggt agtagccaag cgatggggtg
      841 acgcaggagg gtagccccgc cagtgagtgg tagtactggt gtaagggtgt agccagccgc
      901 cataggcaaa tccgtggtgg tgacggtgag acctgacgca tagccgaatg aggcgaagta
      961 gggtgatccc atgctgccga gaaaagcctc tagcgagttc tcatgcggcc cgtaccccaa
     1021 accgacacag gtggtcaggt agagaatacc aaggcgatcg ggtgaactgt ggtcaaggaa
     1081 ctcggcaaaa tgcccccgta acttcgggat aaggggggcc gagttgcgtg aagcccttct
     1141 cgggctagcg tggttcggcc
//
LOCUS       DASQSL010001311         3542 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_104381, whole genome shotgun sequence.
ACCESSION   DASQSL010001311 DASQSL010000000
VERSION     DASQSL010001311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3542
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104381"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1242)
                     /locus_tag="VE844_13470"
     CDS             complement(<1..1242)
                     /locus_tag="VE844_13470"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015743587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HZC02312.1"
                     /translation="MNPLTSVLLTDLYQLTMLAGYLDRRMEATAVFELFVRKLPDCRN
                     FLLVAGLEQALAFLERLRFTPEELDWIKHSGRFKPAFIDYLAALEFTGDVEAMPEGTV
                     FFANEPVLRVMAPLPQAQLVETRLINLIHFQTLIASKAARLVLTAPGKLLVDFGLRRA
                     HGAEAGLLAARAGYIVGMAGTATVLAAPLFDIPIAGTMAHAFIQAHDEELAAFEHFAR
                     AQPDNVVLLIDTYDTEAAASKVVELAGRLAEEGIPIKGVRIDSGDLAEHARKVRKILD
                     DGGHPEITIFASGNLDEYALAELMKKEAPIDGFGIGTHLDTSADRPYLDYVYKLQEYA
                     GIARRKRSEGKATWPGRKQVYRYRDGQGRLAYDLLTLEADPHPGEPLIKPVMRAGKRL
                     TSPEPLSQIRNRVAEGLASLPE"
     gene            1356..>3542
                     /gene="lon"
                     /locus_tag="VE844_13475"
     CDS             1356..>3542
                     /gene="lon"
                     /locus_tag="VE844_13475"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002811035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HZC02313.1"
                     /translation="MIHRAVPTLPIKNSVLFPYLIMPLAVGRPRSVAAVEAALAKEDK
                     LIAVFAQKGPSIEEPSLDDCYSIGTLGVIKKMGRAEDMLQVVVQGIQRIEIIEVVQER
                     PFVSLNVRLLPEPQDSGTEIEALQRAVLDLASKMLELVQPQMQISISHIISEVENPLH
                     QVYLLGSLLSLDIEREQALLAAASRYEALKLAHDYLHYEVQVLELRNKIASQAQSELS
                     RQQREHLLRQQMRAIQGELGEQSPEQAEVDELRKRMEETSLPEIVHKEVEKELARLVR
                     MSSAAPDYQITRTYVELALELPWNKTTEDILDLDRARTVLDEDHFDLEEVKGRIIEHL
                     AVMKLNPKAKAPILCFVGPPGVGKTSLGQSIARALGRKFERMSLGGLHDEAELRGHRR
                     TYIGAMPGRIIRAIRRAGVKNPLLMLDEVDKLGRDFRGDPAAALMEILDPAQHSTFHD
                     NYLDLPFDLSQVFFITTANTLDSIPRPLLDRMELLRLPGYSDEEKRAIANRYLVARQI
                     NEAGLTSEQVSIPDETLSYIIRRYTREAGVRELERVLGRIARKIATRVARGDIRPVNV
                     TPGDLAELLGPERFFREQMRQKLPPGVAAGLAWTETGGDVLYVEAVLLPEGKKLILTG
                     QLGTVMQESAKAAQSYIWFHAEDLGISKEAIRQSGVHIHVPAGAIPKDGPSAGVTMVT
                     ALTSLYTYRSARSDTAMTGEITLSGLVLPVGGVKEKILAAHRAGIRR"
BASE COUNT          775 a         1014 c         1068 g          685 t
ORIGIN      
        1 ctcaggcaag gaggccagcc cttcagcaac ccggttgcga atttgggata gcggttcagg
       61 agatgtcagg cgcttgcctg cccgcatcac gggtttgatc aagggttcac cgggatgggg
      121 atcggcttcg agggtgagta agtcataggc gagccgacct tgtccatcgc gataacgata
      181 cacctgcttg cggcccggcc aggtggcctt accctcagac cgcttgcggc gcgcaatccc
      241 ggcgtattct tggagcttgt agacataatc gagataaggt ctgtcggcgg aggtatcgag
      301 gtgcgtgccg atcccgaacc catcgatagg cgcctctttc ttcatcagtt ccgctaaggc
      361 atattcatcg agattgccgc tggcaaagat cgtgatctcc ggatgccccc catcatccag
      421 gatcttcctc accttgcggg catgttcggc gagatcgccg ctatcgatcc gcacgccctt
      481 gataggtata ccctcctcgg ccagacggcc ggcgagttct acgaccttgg aagcggcggc
      541 ctcggtatcg tatgtatcga tcaataaaac cacattgtcc ggctgggcac gggcgaaatg
      601 ctcgaaggcc gcgagctcct catcatgggc ttggataaac gcgtgggcca tagtgcccgc
      661 gatcgggata tcgaacaggg gggccgccag cacagtggca gtacccgcca tgccgacaat
      721 atatccggcg cgggccgcta acagtccggc ctcggcccca tgagcgcggc gcaagccaaa
      781 atccacgagc agtttgccgg gcgcggtgag caccaagcga gccgccttgg aggcgatcag
      841 ggtctggaaa tggatcagat tgataagccg ggtttcaacc aattgcgcct gtggcaaggg
      901 cgccatgaca cgcagcaccg gttcattggc gaagaacacc gtcccttccg gcatcgcctc
      961 gacatcgccg gtaaactcga gcgctgccaa gtaatcgatg aaagccggtt tgaatcgtcc
     1021 gctgtgcttg atccaatcga gttcctcggg tgtaaaacgg agccgctcga gaaacgcgag
     1081 cgcctgctcg agacctgcaa ccagcaggaa attacggcag tcgggaagct tgcgcacgaa
     1141 cagttcaaat accgccgttg cctccatgcg acgatcaaga taacccgcca gcatggtcag
     1201 ctgatagaga tcggtcagta agacgctggt aagaggattc atccgcacat ccttaattat
     1261 aacttgactt tgatcatgac ctcattgata aagtgtacgt tacaaaagcc gtttattact
     1321 tacctgtaga cagaggctga accggtatga ctgacgtgat tcatagggct gtgccaaccc
     1381 tgccgatcaa aaacagcgtg ctattcccct acctgatcat gccgcttgcg gtcggtagac
     1441 cgcgctcggt agccgctgtc gaagcggcct tggcgaaaga ggacaaactc atcgcggtat
     1501 ttgcgcaaaa aggcccctcg atcgaggaac ctagcctgga tgattgctac tcaattggga
     1561 cgcttggggt catcaagaag atgggccgcg ccgaggacat gttgcaagtg gttgtccaag
     1621 gcatccagcg catagagatc attgaagtcg ttcaggaacg gccgtttgtc agcctcaacg
     1681 tgcgtctatt gcccgagccc caagactcag gcacagagat cgaagccttg cagcgggctg
     1741 tgctcgatct ggcgagcaag atgctggaat tggtgcagcc gcagatgcag atcagcatca
     1801 gccatatcat ctcggaggtc gagaatccct tgcatcaggt ctacctctta ggctcgctgc
     1861 tgtcacttga cattgaaaga gaacaggcct tgctggcggc tgcgagccgc tatgaagcgc
     1921 tgaaactcgc gcatgattat ctgcactacg aggtgcaggt gctagagttg cgcaataaga
     1981 tcgcgagcca ggcccaatcc gagcttagcc gtcagcagcg cgagcatctg ctgcgccagc
     2041 aaatgcgcgc catccaaggt gaacttggcg aacaaagccc cgagcaagcg gaagtcgatg
     2101 aactgcgcaa acgcatggag gaaacgagct tgccggagat agtgcacaag gaggtggaaa
     2161 aagagttggc acgtctggtc cgcatgtcct ctgcggcccc tgattaccag atcactcgaa
     2221 cctatgtcga gctagccttg gaactacctt ggaacaagac caccgaggat atcttggatc
     2281 tggatcgcgc ccggacagtg ctcgacgagg atcacttcga tctggaagag gtgaagggtc
     2341 ggatcatcga gcacctggcg gtcatgaagc tcaaccccaa ggccaaggcc ccgatcctct
     2401 gctttgtcgg gccccccggt gtgggtaaga cctcgctcgg tcaatccatc gcccgggcgc
     2461 ttgggcgcaa gttcgagcgc atgtcgcttg gagggttgca tgatgaggcg gagttgagag
     2521 gccaccgtcg cacttatatc ggggctatgc cgggccggat catccgcgcg atccgccggg
     2581 ctggggtcaa gaatcccctg ctgatgctcg atgaggtgga taagctcggg cgggacttcc
     2641 gcggcgatcc cgccgcggcg ttgatggaga tcctggaccc tgcacaacac tccacgtttc
     2701 atgataatta cctggatctg cccttcgatc tctcgcaggt tttctttatc accaccgcca
     2761 ataccctgga cagcatcccg cggccgctcc tggatcgtat ggagctcctg cggctgcccg
     2821 gctacagcga tgaagaaaaa cgtgcgatcg caaaccgcta ccttgtagcg cggcagatca
     2881 atgaggccgg actgaccagc gaacaggtgt cgatcccgga tgagacgctg agctacatca
     2941 tccgccgcta tacccgcgag gccggggtac gcgagctcga gcgggtgctc gggcggatcg
     3001 cacgcaagat cgcgacgcgt gtggcgcggg gtgacatccg gccagtaaac gtgacgccgg
     3061 gggatctggc ggaattgctg gggccagagc gcttctttag ggaacagatg cggcaaaaat
     3121 tgccgccggg cgtagccgct ggattggcct ggaccgagac gggaggcgat gtcctctatg
     3181 tcgaggcggt actgcttccg gaaggcaaga agctgattct caccggtcag ctcggaaccg
     3241 tgatgcaaga gtcggccaag gccgcacaga gctatatctg gttccacgcc gaggatctcg
     3301 ggatcagtaa ggaggccatc cgccaaagcg gcgtccatat ccatgtaccc gctggcgcga
     3361 tccccaaaga cgggccatcc gccggggtca ccatggtcac agcgctcact tccttataca
     3421 cgtaccgctc ggcacgcagc gatacagcca tgaccggaga gatcaccttg agcgggctgg
     3481 tgctgccggt gggtggtgtg aaagaaaaga ttctggcggc tcatcgcgcc gggatccggc
     3541 gg
//
LOCUS       DASQSL010001312         1168 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_11484, whole genome shotgun sequence.
ACCESSION   DASQSL010001312 DASQSL010000000
VERSION     DASQSL010001312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1168
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11484"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1104)
                     /locus_tag="VE844_13480"
     CDS             complement(<1..1104)
                     /locus_tag="VE844_13480"
                     /inference="COORDINATES: protein motif:HMM:NF014581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /protein_id="HZC02314.1"
                     /translation="MSPFNQVYSVRSTPQRRELGNILVDAPTRGGKGLLAIAQILTWP
                     HSSVILDIKGELYEATAAYLRQRGHKIMVVDPRGVGNQYDPLRGKSTERELYAVAKYL
                     LYTEGERDPIFTDRGIKMLTQLFLAGREENRQAGYDKYRLLPYALQLMNMPINQIAAH
                     LHAVSPELATKFLSGTYNPEKDYDEKKFLTSAWESADARLYPIRSDELLRCFDGSDFT
                     GEEIITSKQPITVYLRLPESQLLALVPVIRLLFQSLINACIDTYDDKPGRTAEEKGCY
                     PVLFLIDEAGRAAIPKLYEYAVTVVGRQISLWIAMQSIVQLEAIYGWAHAQELLENLD
                     TKIFYRQGHVTAEYLEKELGEKSEFSRSHSSREG"
BASE COUNT          254 a          306 c          339 g          269 t
ORIGIN      
        1 gccctcccgg ctgctgtgcg agcgggagaa ctcggatttt tcgcccagct ccttctccaa
       61 atactccgcg gtgacatggc cttgccgata gaagattttc gtgtctaaat tttccagaag
      121 ctcctgggca tgagcccacc cataaatagc ctcaagctgg acaatggatt gcatggcaat
      181 ccagaggctg atctgtctgc caaccaccgt gacggcgtac tcgtagagct tgggaatggc
      241 ggcgcgtccg gcctcgtcaa tcagaaagag gaccgggtaa caaccctttt cctctgcggt
      301 gcgtcctggt ttatcgtcat aagtatcgat acacgcattg atcagggatt ggaagagcag
      361 gcggatcact ggcacgagtg ccaacagttg cgactccggg aggcgaaggt acacggtgat
      421 cggttgcttc gaggtaatga tctcctcacc ggtgaagtct gagccgtcaa aacaacgtaa
      481 gagttcgtct gagcggatgg gatagagtct ggcgtctgca gactcccagg cggaggtgag
      541 aaactttttc tcatcatagt ccttctcggg gttgtaggtg ccggagagga atttggtcgc
      601 cagttcaggc gagacggcat gcagatgcgc cgcgatctga ttgatgggca tattcatgag
      661 ttgcaaggca tagggtaaga ggcggtattt atcatacccg gcctggcgat tttcctcacg
      721 gccggccaag aagagttggg tgagcatttt gatcccccgg tcggtgaaaa tcggatcacg
      781 ctctccttcc gtatacagca gatacttggc caccgcgtag agttcccgct cggtagactt
      841 gcctcgcagc ggatcgtact gattgcccac cccccggggg tcaaccacca taatcttatg
      901 accgcgttga cgaaggtacg ctgccgtcgc ttcatagagc tcacctttaa tatccaggat
      961 aaccgacgag tgaggccagg tgagaatttg cgcgatcgcc agtaatccct tccctcccct
     1021 ggttggcgca tccactaaga tgttcccgag ttcccggcgc tgcggggttg agcggacgga
     1081 atagacttga ttgaagggtg acacccctaa gaggagtcct gcctcgttgt gccaagtgga
     1141 cgtgaggagc ttatcaattt catgggga
//
LOCUS       DASQSL010001313         1049 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_169797, whole genome shotgun sequence.
ACCESSION   DASQSL010001313 DASQSL010000000
VERSION     DASQSL010001313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169797"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..254
                     /locus_tag="VE844_13485"
     CDS             <1..254
                     /locus_tag="VE844_13485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02315.1"
                     /translation="LTAYSHSTQATDLRLCHTVALTIPMCAPVTEREASGEPARRLDE
                     RDIADLDQGQSIAAELGREWAAVKYRENPPNDICSEFED"
     gene            complement(310..597)
                     /locus_tag="VE844_13490"
     CDS             complement(310..597)
                     /locus_tag="VE844_13490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02316.1"
                     /translation="MLQLAKLMIDLERLQIAADGAWKVRIHRFPHSSHMYATERTTTL
                     DFYWNLSFSMQGPQVEASTRDSAIGEMAWREFDYLWSSALSVSPADVDLGK"
     gene            767..>1049
                     /locus_tag="VE844_13495"
     CDS             767..>1049
                     /locus_tag="VE844_13495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007507654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HZC02317.1"
                     /translation="MLFRLLYLITIRLFGWLALLASSTAAKNVESLILRHEVAVIRRQ
                     VKRPFLTWPNRAIVSVLTRLLPRRLRTHRFVTPAALLAWHRRLITRKWTY"
BASE COUNT          236 a          310 c          282 g          221 t
ORIGIN      
        1 tacttaccgc ttactcgcac tccacgcaag ccactgacct gcgactttgc cacaccgtgg
       61 ctctcaccat ccctatgtgt gcccccgtga ccgagcgcga agcgtccggg gagcctgcgc
      121 gacgcctcga tgagcgcgac atcgccgacc ttgatcaggg acagagtatt gctgcagaat
      181 tgggccggga atgggcagca gtaaaatatc gagaaaaccc accgaacgat atttgttcgg
      241 aattcgagga ttgaagccct gttagcggaa tatcgagatc catcgaatag cacacaaaat
      301 cgcggtcggc tattttccaa gatcgacgtc agcgggcgac acgctaaggg cggacgacca
      361 cagatagtcg aactcgcgcc aagccatttc tccgattgcc gagtctcgag ttgatgcctc
      421 gacttgaggc ccttgcatgg aaaagcttaa attccagtaa aagtccaagg tggtggtgcg
      481 ctcagttgcg tacatgtgac ttgaatgagg gaagcgatgg attcgcacct tccatgcacc
      541 gtccgcagca atctgaagtc gttcaaggtc gatcattagc ttagccagtt gcagcaccgg
      601 atagctcttt cacgagattc cgagattttg caagcggagg gaagcagcgg cgcatcttgg
      661 atcgagaaca agaatctcca actccgtatg ccgtgccaaa actcgtcaca agtgtgatga
      721 actgcggttt caatgactcc acgtgatcac gacatgatcg cttgctgtgc tgttccgact
      781 gctgtatctg atcacgatca ggctgttcgg ctggctcgcg ctgctcgcga gcagtaccgc
      841 agccaagaac gtcgagagcc tcatcctgcg ccacgaggtc gcggtgatac gccgtcaagt
      901 gaaaaggccc tttctgacct ggccgaaccg ggcgatcgtg tccgtcctga cccgcctgct
      961 cccccgccgg ctgcgaaccc atcggttcgt cactcctgcc gccctgctgg cctggcaccg
     1021 ccgcctgatt accagaaaat ggacttatc
//
LOCUS       DASQSL010001314         2280 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_131996, whole genome shotgun sequence.
ACCESSION   DASQSL010001314 DASQSL010000000
VERSION     DASQSL010001314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2280
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131996"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..443
                     /locus_tag="VE844_13500"
     CDS             <1..443
                     /locus_tag="VE844_13500"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZC02318.1"
                     /translation="RKGRLQEAQRYYHRLLNLNPRDSVAMAALFNLQRTTPGEISESQ
                     IKLLLDREPNAPHLHFSLGNLYARQARWAEAEQSYFQAYGHDSQNPDYVFNLAVSLDQ
                     LGQTETALNYYREALALADRQPVNLNTSAILARIRSLSQFVSTR"
     gene            447..2153
                     /locus_tag="VE844_13505"
     CDS             447..2153
                     /locus_tag="VE844_13505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015829116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HZC02319.1"
                     /translation="MSPTRQRPRLGELLVDKGVVSPDQIRIALIEQRKRKEHLGKILV
                     KLGFATEAIIRDVIGGAFGQESVDLSKIVVDSEAVKLIPKEMARRYRLLPLTYEIARH
                     RLTVAMADAFNVVALDQINALLGGDLEIVPLLASEAEIEKAIDQFYGFELSVDGILQE
                     METGEIDYASLEVDSEEYSQPVVRLVNALLSDAVKRGASDIHFEPEQGFLRFRYRIDG
                     VLRQIRSLHKNYWSAIAVRLKVMSGMNIAETRAPQDGRFSLTLSGRPVDFRVSSMPTV
                     HGENIVLRILDRQKGLVPLEQLGLEEDVLTVLRLMMARPEGIVLVTGPTGSGKTTTLY
                     SILNHLNTELVNIMTLEDPVEYPMGMIRQTSVNEAVHLDFASGIRSMLRQDPDIILVG
                     EIRDEDTATMAFRAAMTGHQVFSTLHTNSALGAIPRLLDIGIRPDIMAGNIIGVMAQR
                     LVRKLCPHCKETYTPSELEGRLLKLTAVNSPTLICRARGCTECDQQGYKGRTAIMELV
                     KFDLEMDELIARGATLRELRNWALNQGLKPLAEAGIDRVLDGTTSLDEVSRVIDLTHR
                     IK"
BASE COUNT          517 a          622 c          654 g          487 t
ORIGIN      
        1 tgcgcaaggg taggctccaa gaggcccagc ggtattacca ccgtctgctc aatctcaatc
       61 caagagacag cgtagcgatg gcggccctgt tcaacttaca aaggaccacg cctggcgaga
      121 tcagcgaaag tcagatcaag ctgctgctgg atcgagaacc caatgcgccc catctgcatt
      181 tcagcctcgg taacctctat gccaggcagg cccgctgggc agaagccgag cagtcctact
      241 ttcaggccta cggccatgac agccaaaatc ccgattacgt gtttaatctg gcggtaagcc
      301 tcgatcaact ggggcagacc gagactgcac tcaattatta ccgggaggcc ctggcacttg
      361 cggatcggca gccggtgaat cttaatacct ccgcgatcct cgcccgcatc cgatccttat
      421 cccagtttgt cagcacccgt tgaaccgtga gccccacccg acagagaccg cgccttggag
      481 agttgctggt tgataaaggg gtagtgagcc ccgatcagat ccgcattgcc cttatcgaac
      541 agagaaagcg caaagaacac ctgggcaaga tcctggtgaa gctcggcttt gccaccgagg
      601 cgatcatacg cgatgtcatc ggcggggcat ttggccaaga aagcgtagat ctttccaaaa
      661 tagtcgtcga cagcgaggcg gtcaagctca ttcctaaaga aatggcgcgg cgttaccgtc
      721 tcctgccgct gacctacgag atcgcccgac accgcctgac ggtcgcgatg gcagatgcct
      781 tcaatgtagt ggccctcgat cagatcaacg cgcttttggg tggggatctc gagatcgtgc
      841 ctctgttggc cagcgaggct gagattgaaa aggccatcga tcaattttat ggcttcgagc
      901 tctcggtcga tgggatcctc caggagatgg aaaccggtga gatcgactat gcgagcctgg
      961 aggtagatag tgaggagtac agccaaccgg tagtgaggct ggtaaacgcg ctcttgtcag
     1021 atgctgtcaa gcgcggggcc tcggatatcc attttgagcc tgaacaggga ttcctgcggt
     1081 tccgctatcg gatcgacggg gtactccgtc agatccgaag cctccataag aattactggt
     1141 cggcgatcgc cgtgcgactc aaggtgatgt cggggatgaa tatcgctgag acccgagcac
     1201 ctcaggatgg gcgtttctcg ctgaccctct cgggacggcc cgtcgatttc cgggtctcct
     1261 cgatgcccac cgtgcatggt gaaaacatcg tattgcgcat attagatcgg cagaagggtt
     1321 tggtacccct tgaacaattg ggtctggagg aggacgtcct taccgtactg agactcatga
     1381 tggctcgccc tgaaggcatt gtattagtga cggggcctac cggcagtggc aagaccacga
     1441 ccttgtactc gatcctgaat catctgaata cggagttggt caatatcatg accctggaag
     1501 atcccgttga atatcctatg ggcatgattc gccagacttc ggtgaatgaa gcggtgcatc
     1561 ttgattttgc gagcgggatc cgcagtatgc tccggcaaga tccggacatt atcttagtcg
     1621 gcgagatccg cgatgaggat acggcaacta tggcatttcg agcggccatg accggtcatc
     1681 aggtattttc caccttgcat acgaactccg cgctcggcgc catcccgcgc cttttggata
     1741 ttggcatccg gccggatatt atggccggta atatcatcgg ggtcatggcc caacgcctgg
     1801 tgcgcaaact ctgtcctcat tgtaaagaaa cctatacgcc ctcagaattg gaaggccgcc
     1861 tgctcaagct tacagcggtc aatagcccga ccctgatctg ccgggcgcgg ggttgtacgg
     1921 agtgcgacca gcaaggctat aaaggcagga ccgcgatcat ggagctggtg aagttcgacc
     1981 tggagatgga tgaattgatc gcccgtggcg cgaccctgcg ggagctgcga aactgggctt
     2041 taaatcaagg gcttaaaccg ctcgccgagg cgggcatcga ccgggtcttg gatggaacca
     2101 cgagcctcga tgaggtctcc cgggtaatcg atctcaccca taggatcaaa tagtggagat
     2161 ctactcttac aaggccatag atcaccaggg ccggatccag cgtggccgaa tcaatgcact
     2221 caatgtggcg gatctcgagc tccgtctaca gcggatgggt ttagatctga tcacgtataa
//
LOCUS       DASQSL010001315         1462 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_77726, whole genome shotgun sequence.
ACCESSION   DASQSL010001315 DASQSL010000000
VERSION     DASQSL010001315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1462
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77726"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            286..>1462
                     /locus_tag="VE844_13510"
     CDS             286..>1462
                     /locus_tag="VE844_13510"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HZC02320.1"
                     /translation="MQPLHSLKVLLVGHPCSPGLGSEPGNTWNWAWQLTAHHQVWVLT
                     HPQYRSAAERFLRERPRPNLHFIWLTLPSLWDPWDPDQGERGIRLHYLLWQRAAFWEA
                     VRQHRVHNFNLVHHVSWNTLSAPPLLWRLPIPFVWGPVGGGQTAPAAFRAFFGSGWRR
                     EARRNLRLRLMPLFPALRRAVQRCALLLATNRETVKLLERAGAHEVRLFLDTGLAPDY
                     LPASPPKRKTGPQLTLLWAGRLESRKALPLALEALAQMVDVPVRLLVAGDGPLRSAWE
                     AKAQQLGCLDRVRFMGKIPWESMTELFRQADIFLFTSLQDSSGAAVFEAMAHGLPIVT
                     LDHQGVGAFVPPEAAIRVPVTTPAVTISALAHALRRLAQSWETRVKMGEAAWTYARSQ
                     "
BASE COUNT          304 a          408 c          425 g          325 t
ORIGIN      
        1 atggggttta cggatatccg gatccgtggt acggcattgg cccttacgca attccctata
       61 ctctataggg cgccagaatc ggcaaaaagg ttcctgactc atatgagtct gccgatcggc
      121 agactgggac aatggtatcc gagtcttttc agccatactt tgtactttac tgtgcaaaaa
      181 caacgtacct gaagatttcg tcggctttca tgactgacca gtctgccgag gatcagcggt
      241 ggatgtgtgc ggaggatcca gaagggtttc caggaaaagg atagtatgca gccattacat
      301 tctctcaaag ttttattggt cggccatccg tgcagccctg gcctcggatc ggagcctggt
      361 aacacctgga actgggcctg gcagcttaca gcccaccatc aagtgtgggt gctgacccat
      421 ccgcagtatc gctcagcagc cgaacgtttc ctacgcgaga gaccacggcc aaacctgcat
      481 tttatctggc ttacgctacc gtcattgtgg gacccctggg acccggatca gggcgagcgg
      541 ggtatcagac tccattatct tctgtggcag cgcgccgctt tctgggaagc ggtccggcaa
      601 catcgggtcc acaacttcaa ccttgtgcat catgtgagct ggaatacttt gagtgcccct
      661 ccattgctat ggcgcctgcc aatccctttc gtatgggggc cggtaggcgg aggacagacg
      721 gcacccgcgg ccttccgagc attttttggc tcagggtggc ggcgggaagc acgcagaaac
      781 ctacggctgc gactcatgcc gcttttccca gcgctgcggc gagccgtaca gcgctgtgcc
      841 ctgttgctgg ccaccaatcg tgaaacagtc aagctcttgg agcgagccgg agcacacgag
      901 gtgcggctat tcttggatac tggtctggcg cctgattacc ttccagcatc cccaccgaaa
      961 cgtaagacag gtcctcagct gacgttactc tgggcaggac ggctagagtc cagaaaagcc
     1021 ctcccattag ctctagaagc tttggctcag atggtagatg tgccggtacg gttgttggta
     1081 gccggggacg gcccattgcg atcagcgtgg gaggcgaagg ctcagcagct cgggtgccta
     1141 gaccgtgttc ggttcatggg taaaatccct tgggaatcga tgacagaatt gttccggcag
     1201 gcggatatct ttctcttcac aagtttgcaa gactcctctg gggcagcagt attcgaggct
     1261 atggctcatg gactccccat cgtgaccctc gatcaccaag gcgtgggagc ctttgttcct
     1321 ccagaagcgg cgatcagagt gccggtaacg acgcccgccg tcactatctc agctctggcg
     1381 catgcactgc gccgactggc acaatcctgg gagacccggg tcaagatggg cgaggcagcg
     1441 tggacatatg ccaggagcca aa
//
LOCUS       DASQSL010001316         3939 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_77729, whole genome shotgun sequence.
ACCESSION   DASQSL010001316 DASQSL010000000
VERSION     DASQSL010001316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3939)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3939)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3939
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77729"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1031)
                     /locus_tag="VE844_13515"
     CDS             complement(<1..1031)
                     /locus_tag="VE844_13515"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010117741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HZC02321.1"
                     /translation="MRLFKLPDLGEGLAEAEIVTWHVAVGDEVKQDQPLVSVETAKAI
                     VDIPSPETGRIMKLYGQPGDIFHIGDPLVEFDTGETEADTGTVVGQVKAGREVMVEAL
                     TTVGRGMVGAKTTPAVRALAHRLNVDLSIVTPTGPDDMITAVDVQRVAKILAEVGPLQ
                     PLRGVRRSMARSLAQAHAEVVPVTLCDDADINAWSPDEDITLRLIRALIAGCQAEPSL
                     NAWYDGQNLGRRVLNKIDLGIAVDTPDGLFVPVLRDIANRDRAALRRGLDAIKHAVKA
                     RKIPPEELRGYTITLSNFGTLAGRYADPVVVPPTVAILGAGKIRAAVVAVNDQPAVHR
                     ILPLSLTFD"
     gene            complement(1093..2073)
                     /locus_tag="VE844_13520"
     CDS             complement(1093..2073)
                     /locus_tag="VE844_13520"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004300082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HZC02322.1"
                     /translation="MPALTLVEAINRALAYEMAADPAVVLLGEDVGQNGGVFRATVGL
                     QQRFGTERVLDTPISETVIVGMAIGMAAEGLKPVAEIQFMGFIYAAIDQILNHATRLR
                     TRTRGRLTCPLVVRTPHGGGIHAPEHHSESTESLFVHIPGLRVVIPSSPARAYGLLLA
                     AIRDPDPVLFLEPTRLYRLVRQEVEDTGEALPLDTCFMLREGSDITLVSWGAMMHETL
                     EAAEQLAHGGITADIIDLATLKPLDMETILGSVSKTGRCVIVHEAARTCGVGAEIAAQ
                     LAERGLLSLLAPVQRVTGYDTVMPSHRLEKHYIPDTARIVKAVKETLEFA"
     gene            complement(2075..3142)
                     /gene="pdhA"
                     /locus_tag="VE844_13525"
     CDS             complement(2075..3142)
                     /gene="pdhA"
                     /locus_tag="VE844_13525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011237053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HZC02323.1"
                     /translation="MTRVARFEIHYTQFLDHHANVVQELPVSFRGPTALIPLYRAMVL
                     TRTFDKKAIALQRTGQLGTFASCLGQEAIGVAIGSAMRADDVLLPFYRDYAAQFLRGV
                     RMTDIFLYWGGDERGMNYAIPRRDFPICVPVASHACHAAGVAAAIKYRHEARVAVCIL
                     GDGATSKGDFYESINIAGVWQLPAVFVINNNQWAISVPRSAQSAAETLAQKAIAAGIQ
                     GEQVDGNDVIAVSHAVITALDKARSGGGASLIEALSYRLGDHTTADDARRYRPLEEVE
                     RHWQYDPIARLRTYLVRLGYWSEQDETALQSECGRQVEEAVNHYLKTPPQPLSTLFDY
                     LYASLPAALESQYRHACETGE"
     gene            3258..3560
                     /locus_tag="VE844_13530"
     CDS             3258..3560
                     /locus_tag="VE844_13530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011418970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009927 - histidine phosphotransfer kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HZC02324.1"
                     /translation="MCDKIVIYADPDLADLIPGFLENRRKDVLAITEAMARGDLERVR
                     ILGHSMKGSGGGYGFETITEVGGALEEAARIQDTEAIRRALTRLEHYLEQIQVVYE"
     gene            3653..>3939
                     /locus_tag="VE844_13535"
     CDS             3653..>3939
                     /locus_tag="VE844_13535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02325.1"
                     /translation="MTLVFLAWQNAHEDETKQFKVESASLREAVTHSITASDDLTHTL
                     ATQMEAMGEIRGELFQVFASAILSRYPFIESISYHPLIRKLPSMGLAGHDL"
BASE COUNT          819 a         1163 c         1167 g          790 t
ORIGIN      
        1 tggtcgaagg tcagcgacag cggcaggata cgatgtacag ccggctggtc attgacagcc
       61 accacggccg cacggatctt acccgcaccg aggatcgcta cggtcggcgg cacgactaca
      121 ggatctgcat aacgcccggc aagggtgcca aagttggaga gtgtaatcgt gtaaccgcgt
      181 aattcttccg gcgggatctt gcgcgccttg acggcgtgtt taatggcatc gagcccgcgg
      241 cgcaaagccg cgcgatcgcg gttagcaata tcccgcaaga ccggaacaaa taggccatcg
      301 ggggtatcta cggcgatccc gagatcgatc ttgttgagta ctcgccggcc caaattctgg
      361 ccatcatacc atgcgttcag cgagggttcg gcctggcagc cggcaatgag ggcgcggatc
      421 aggcgtaagg ttatatcttc atcgggactc caggcgttga tatcggcatc gtcgcagagg
      481 gtgaccggga cgacttcagc atgggcctgg gccaggctcc gcgccatgga acggcgcacg
      541 ccgcgcaacg gctgcagtgg accgacctcg gccaagatct tggccacgcg ctgcacatcg
      601 accgcagtga tcatgtcgtc cgggccggtg ggcgtgacta tggacagatc gacgttcagc
      661 cggtgggcga gcgcgcgcac ggcgggcgtc gtcttggcgc cgaccatgcc gcggcctact
      721 gtagtcagcg cttcgaccat gacctctcgg ccagccttga cttgccctac caccgtgccc
      781 gtatccgcct cggtttcgcc cgtgtcaaat tcaaccagcg gatcaccgat gtggaagatg
      841 tcacccggct ggccatacag tttcatgatc cggcccgtct ccggactcgg gatatcgaca
      901 atcgccttgg ccgtctcaac cgagaccaag ggctgatcct gtttgacctc gtcgccgacg
      961 gccacatgcc acgtgacgat ctcggcctct gccaggcctt cacccagatc gggaagcttg
     1021 aacaatctca tgaggactcc agggaaaaag tgatgggtga ggcgtgaggc gtgaggcgtg
     1081 atttaaacaa tctcatgcga actccagggt ttccttgacg gctttaacga tccgcgccgt
     1141 atcgggaata tagtgtttct ccaagcggtg cgagggcatc accgtatcgt agccggtgac
     1201 gcgttggacc ggggcaagca gtgaaagcaa gccgcgttcg gccaattgcg ctgcgatctc
     1261 ggcgccgacg ccacaggtcc gcgcggcttc atgaacgata acgcagcggc cggtcttgct
     1321 tacggatccc aaaatcgtct ccatatcgag tggctttagg gtggcgagat cgatgatgtc
     1381 ggccgtgatc cctccgtggg ccagctgctc agccgcctcc agcgtctcat gcatcatcgc
     1441 gccccaggat accagggtaa tatcggatcc ttcacgtagc atgaagcagg tatcgagtgg
     1501 caaggcttcg cccgtgtctt cgacctcttg gcgcaccagc cggtagaggc gcgtcggttc
     1561 caggaacaat accggatccg gatcgcggat agcggccagt aacagtccat aggcgcgcgc
     1621 cggcgatgaa ggaatgacca ccctaagccc agggatatgt acaaacagag actccgtgct
     1681 ttcggagtga tgctccggag cgtgaatgcc gcccccatgg ggcgtgcgca ctaccagggg
     1741 acacgtcaac ctgccgcggg tgcgcgtccg caggcgcgtg gcatgattta ggatctgatc
     1801 gatggcggca tagatgaacc ccatgaactg gatctcagcc acgggtttca agccctctgc
     1861 cgccataccg atcgccattc caacgatcac ggtctcggaa atcggtgtat cgagcacacg
     1921 ctcggtgccg aagcgctgct gtaatcccac cgtggcccgg aatacaccgc cattctggcc
     1981 gacatcctcg ccgaggagga cgaccgccgg atctgcggcc atctcatagg ccagcgcccg
     2041 attgatcgct tcaaccaggg tcaacgccgg cacgctactc tcccgtctca cacgcgtgcc
     2101 ggtactgtga ttccaaagcc gccggcaggc tggcatagag ataatcgaat agagtggata
     2161 gaggctgcgg cggtgtcttc aagtagtggt tgaccgcctc ttcgacctgc cggccgcact
     2221 cgctctggag cgcggtctca tcctgctcgc tccagtatcc caagcggacc agatacgtgc
     2281 gcagacgggc gatgggatca tactgccagt gccgctccac ctcttcaaga ggacggtagc
     2341 ggcgggcgtc gtcggcggtc gtgtgatcgc ccagacgata gctcaatgcc tcgataaggc
     2401 tggccccacc gccgctacgg gccttatcca gggcggtaat taccgcatgg ctgaccgcga
     2461 tcacatcgtt cccgtccacc tgttccccct ggatccccgc ggcaatggcc ttttgcgcca
     2521 aggtctcggc ggcactctgg gcgctacgcg gcaccgagat agcccactga ttgttattga
     2581 tcacgaatac cgctggcagt tgccagaccc cggcgatatt gatggattca tagaaatccc
     2641 ctttggacgt agccccatcg cccaagatac agacggcgac acgggcttca tggcgatact
     2701 tgatcgcggc agccaccccc gctgcgtggc aggcgtggct ggcgaccggc acgcagatgg
     2761 ggaaatcccg gcgtgggatc gcgtaattca tgccgcgctc gtcaccgccc caatagagga
     2821 agatgtcggt catacgaaca ccgcgtagaa actgagcggc ataatcccgg taaaagggta
     2881 ataatacatc gtccgcccgc atggcactgc caatcgccac accgatagcc tcctgaccga
     2941 ggcacgaggc aaacgtgccc agttggccgg tgcgttgcag cgcaatcgct tttttatcaa
     3001 acgtacgggt gagaaccatg gcccggtaca aagggatcaa cgcggtggga ccgcggaaag
     3061 atacgggtaa ttcctggaca acgttggcgt ggtgatctag gaattgggtg taatggatct
     3121 cgaagcgtgc gacacgggtc atcactttct tcctttctcc aaggtgcttt ggatgtctaa
     3181 ctcctcgctt taccctaaag tatagcttac cgtatgctgc taaatgatca gtgcttatag
     3241 taaaatattt aagagtaatg tgcgataaaa tcgtgatcta tgccgatcca gatctggcag
     3301 atctgatccc gggctttctc gaaaatcgcc gtaaggatgt gcttgcgatc actgaggcca
     3361 tggcccgggg tgatctcgag cgcgtcagga tcctcggcca tagcatgaag ggtagcggcg
     3421 ggggatatgg gtttgagacc attaccgagg tgggtggggc cctagaagaa gcggcccgga
     3481 tccaggatac agaggccatc cggcgcgcgc ttacccggct tgaacattat ctagagcaga
     3541 tccaggtggt ctacgagtag tgtctctacg atcgatgttg ccgaaggtaa ggcggcccct
     3601 atccagtcga tttacttatt tcgtcgcgac cggccttggg atctcgtttt ctttgacact
     3661 ggtcttcctg gcctggcaaa acgcccatga agatgagacc aagcaattca aagttgaatc
     3721 cgcctccttg agggaggcgg taacccacag tattacagcc agcgatgacc taacgcacac
     3781 cttggcaact cagatggagg cgatggggga gatccgggga gaattattcc aggtgttcgc
     3841 cagtgcgatc ttgagtcggt atcccttcat cgagtccatc tcctaccacc cactgattcg
     3901 gaaactgccc agtatgggtt tggccggcca tgacctcat
//
LOCUS       DASQSL010001317         1270 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_63702, whole genome shotgun sequence.
ACCESSION   DASQSL010001317 DASQSL010000000
VERSION     DASQSL010001317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1270
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63702"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..434
                     /locus_tag="VE844_13540"
     CDS             <1..434
                     /locus_tag="VE844_13540"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HZC02326.1"
                     /translation="EYCGLGHYIMRGRVVVEEEGAFQAWLTAQPTFAQPSGKEEGKAR
                     GDDMVEQGRKLAQDKGCLGCHSVDGTPSAAPTWKGLYGKTETLADGSTVVVDEDYLKE
                     SIAKPGAKVVKDYAPLMPPYNFSSEDLDALIAYTKDLSEKG"
     gene            494..>1270
                     /locus_tag="VE844_13545"
     CDS             494..>1270
                     /locus_tag="VE844_13545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019561800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HZC02327.1"
                     /translation="MSDAPYQESLQLHDPHSFWTKYIWSQDHKVIAIQYVITAMSVGL
                     VALVLSLLMRMQLGFPGSLSFIDPGSYYQYVTMHGMIMIIYLLTALLLGGFGNYLIPL
                     MVGARDMVFPFVNMLSYWVYLLSVLVLMASFFVPGGPTGAGWTLYPPQAILPGTPGAE
                     GGIVLMLVSLVIFIVAFTMGGLNYVTTVLQARTRGMTLMRMPLSVWGIFVATIMALLA
                     FPALFVGCVMLLLDRVVGSSFFMPAVSAVSSMGQQLDYEGG"
BASE COUNT          243 a          357 c          387 g          283 t
ORIGIN      
        1 ccgaatactg cggtctgggg cactatatca tgcgcggccg ggtcgtggta gaggaggaag
       61 gcgcgtttca ggcatggttg accgcgcagc ccacgttcgc gcaaccctcg ggtaaggagg
      121 agggcaaggc caggggggat gatatggtcg agcaaggtcg gaaactggcg caagataagg
      181 gatgtctcgg ctgccacagt gtggacggca ctcccagcgc cgctcccacc tggaaaggcc
      241 tatacggcaa aaccgaaacg ctggccgacg gcagtacggt cgtggtcgac gaggattatc
      301 tgaaggagtc cattgccaag ccgggtgcca aggtcgtcaa agactacgcc cccctcatgc
      361 cgccatacaa cttcagcagc gaggatctgg acgcgctaat tgcgtatact aaagacctgt
      421 ccgaaaaagg ttagattgcg gagaggaatc aaatgatgag atttaggcta atcgagcata
      481 aaggtaaatt ttgatgtcag acgcccccta tcaagagagt ttacaacttc acgatccaca
      541 tagcttctgg accaagtaca tctggagcca agaccacaag gtcattgcca tccagtacgt
      601 gatcaccgcg atgtcggtgg ggctggtggc tttagtgttg tcgttgctga tgcggatgca
      661 actgggattc ccgggcagct tatcctttat cgatccgggc tcgtactacc agtatgtcac
      721 catgcacggg atgatcatga tcatctatct gctcaccgcc cttcttctgg ggggctttgg
      781 caactacctc atcccgctga tggtgggcgc ccgcgatatg gtcttcccct ttgtgaacat
      841 gctgagttac tgggtctatc tgctctccgt gctggtgctg atggcgagct tcttcgtgcc
      901 cggcgggccc acgggcgccg gctggaccct gtacccgccc caggctatcc ttcccggcac
      961 cccgggggcg gagggtggca tcgtcttgat gctcgtctcc ctggttatat tcatcgttgc
     1021 gttcaccatg ggcgggctga actacgtgac gaccgtgttg caggcccgca cacgggggat
     1081 gacgctgatg cgcatgccct tgtcggtttg gggcattttc gtggccacca tcatggcgct
     1141 gttggccttc cccgccttgt tcgtcggctg cgtgatgctg ctgctggacc gggtcgtggg
     1201 cagcagcttc ttcatgcccg ccgtctccgc cgtctcttcg atgggacaac agctcgacta
     1261 cgagggaggc
//
LOCUS       DASQSL010001318         2912 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_159780, whole genome shotgun sequence.
ACCESSION   DASQSL010001318 DASQSL010000000
VERSION     DASQSL010001318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2912)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2912)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2912
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159780"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1287
                     /locus_tag="VE844_13550"
     CDS             <1..1287
                     /locus_tag="VE844_13550"
                     /inference="COORDINATES: protein motif:HMM:NF024687.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TGS domain-containing protein"
                     /protein_id="HZC02328.1"
                     /translation="NPCLTSLLQAMSPKANQYQSLHTAVIGPEGQTLEVQIRTLAMHR
                     HAELGVAAHWRYKEKAREAGLEQRIVWLRGFLEQRDGEREEVTDLIERFKAEAFLNYI
                     YVLTPQGRVIDLPVGSTPLDFAYAVHTEIGHHCRGAKVDGLMVPLTQRLQNGQQVEIL
                     TTRGGTPSRDWLNPNMGYLQSPSARAKVRRWFKQQDHEQHIAQGRAILERERRRLGVT
                     ESNLGRLAKQFGYKQPDDLFAALGHAQISLNQLDHVLREPRPPQPINLPASGLPLKSP
                     ALTRGEVHVLGVSNLLIRMAGCCKPMPNESITGYVTQGHGIAIHRQDCYNFRQLARER
                     PERLIDVAWGTATAQAYPVDVLVEAHDRRGLLRDVSEAVTGEQVNILAVNTLSDRATQ
                     TARMSLTLEIGNAEQLDRVLKHLLRVSGVVQARRKI"
     gene            1549..1986
                     /locus_tag="VE844_13555"
     CDS             1549..1986
                     /locus_tag="VE844_13555"
                     /inference="COORDINATES: protein motif:HMM:NF020918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin family protein"
                     /protein_id="HZC02329.1"
                     /translation="MKTQPIESFNELCTTALEIMKRLDKAGTKVWKDLTNEQLNMVKM
                     GVDYGNRQLEILLSRETPANLLAVQSGIATEFSMKYMDQCRRVFALLTDTGSELMACF
                     NQLKPYWSLTPVTETTATPETGASEVEEEAVTRLAGKPKKTAA"
     gene            2031..2783
                     /locus_tag="VE844_13560"
     CDS             2031..2783
                     /locus_tag="VE844_13560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02330.1"
                     /translation="MGKLLKTLAKIGLVELNDNEHPALGENEPRLEAAAAHDPLLQEQ
                     TLAEAPETEPLGRNRAPARSQDSDQAGIEGRSFEEIYRHAQIPASSYPAEKLLKLLDG
                     LRTLDPATRKAAVMAMDAADEEWRIEDAVSDAQHKIEALQEAGAALVQVVAQAESKTR
                     ADLDAQERYQQEASASLRRQITELEALLEQEFNKIADEKALIQARLQQTREACARETH
                     RYTHEITRLKEILDSFGKAVPSHAPPSSSNPK"
BASE COUNT          703 a          823 c          839 g          547 t
ORIGIN      
        1 aacccatgcc taacgagcct attacaggct atgtcaccca aggccaatca gtaccaatcg
       61 cttcacacgg cggtgatcgg cccggaggga cagaccctcg aggtccagat ccgtaccttg
      121 gccatgcacc gccatgcaga gctcggtgtg gctgctcact ggcgctacaa ggaaaaagcc
      181 cgtgaggctg gcctggaaca gcggatcgtt tggctcaggg ggtttctgga gcagcgggat
      241 ggggagcgtg aggaggttac ggatctgatc gagcgcttca aggccgaagc atttctcaac
      301 tatatctatg tattgacccc tcaaggccgg gtgatcgatc tgcccgtagg ctcaacaccc
      361 ttggattttg cctatgccgt gcacaccgag atcggccatc actgccgcgg cgccaaggta
      421 gacggcctga tggtgccctt gacccagagg ctacaaaacg gtcagcaagt cgagatcctc
      481 accacccgcg gaggcacacc aagccgtgac tggctcaacc caaatatggg ctatcttcag
      541 agcccatcgg cccgagctaa ggtacgccgc tggtttaagc agcaggatca cgaacagcat
      601 atcgcccaag ggcgagcgat tctggagcgt gagcgccgcc gcttgggcgt gaccgagagc
      661 aatctcgggc ggctggccaa gcagttcggc tacaaacaac ccgacgatct ctttgcagca
      721 ctagggcatg ctcagatcag cctgaatcaa ctcgaccatg tcctgcgcga accacggcca
      781 cctcagccga tcaacctgcc tgcgagtggt ttgccgctga agtcgcctgc tctaacccga
      841 ggggaagtcc acgtgcttgg agtaagcaat ctcctcatcc gcatggcggg ttgctgcaag
      901 cccatgccta acgagtctat tacaggctat gtcacccaag gccacgggat cgccatccat
      961 cgccaggatt gttataactt ccggcaactc gcccgagaac ggcctgaacg gctcatcgat
     1021 gtcgcctggg gcaccgccac ggcacaagcc tatccagtcg atgtcttggt cgaagcccac
     1081 gatcgccgtg gtctactgcg ggacgtctcc gaggcggtga ccggtgaaca ggtgaatatc
     1141 ttggctgtga acaccctaag cgaccgcgcc acgcaaacag cgcgcatgtc gctgactctg
     1201 gagatcggta atgcagagca actggatcga gtcctcaaac acttgctgcg cgtctccggt
     1261 gtggtgcagg cccggcgcaa gatttgagct acgcattcag taactgtatg gtattttcag
     1321 ctatacttta aaagatagca taacgctacc tcggcgcgga aaagcggggg atatgccgcg
     1381 cctaaaagcc tcaaatgcga caatctgccg cattaaatac cttcatacgg tcttaacagg
     1441 gtgtttttaa agttaaggcg tgagtcccgc ctcggttgag ggcatggaga agaggtgtaa
     1501 agaggtattt gtttgaccgc caaacatgga tctcaagggg gaaattctat gaaaacgcaa
     1561 cctatagagt catttaacga gctttgcact acagctttag agatcatgaa gcgattggat
     1621 aaggccggta caaaggtgtg gaaggatctg accaacgaac agcttaatat ggtgaaaatg
     1681 ggcgtagatt acggcaatag gcagttagag atattgttaa gccgcgaaac accggccaat
     1741 ctccttgccg tccaatccgg gatcgctacg gagttctcga tgaagtatat ggatcaatgc
     1801 cgtagggtat ttgcgttatt gacggatacg ggatctgagc tgatggcttg tttcaatcag
     1861 ctcaagccgt attggagctt gacaccggtg acagaaacca cagcgactcc cgagacaggt
     1921 gcttcggagg tggaagaaga agctgtcact cgattggccg gcaagcccaa gaagacggct
     1981 gcctagcacg agcagcggca gcgggcgtgg gtctgtaaag cgagattctc gtgggcaaac
     2041 tgcttaagac gctggcgaag atcggtctgg tcgaattgaa tgacaacgag caccctgctt
     2101 tgggggagaa cgagccgcgt ctcgaggccg ccgccgctca cgacccgctg ctgcaagaac
     2161 aaacactcgc tgaagcgcct gaaacagaac cattaggccg gaatagggcc cccgcgagat
     2221 ctcaggatag cgatcaggca ggtattgaag gtcgtagttt cgaggagatc taccgccacg
     2281 cccagatccc agcctcgtcc tacccggccg agaagctgct caagctcttg gacggcttgc
     2341 gcacgctcga tccggccacg cgcaaagccg cggtaatggc catggatgcg gccgatgagg
     2401 agtggcggat tgaagatgct gtcagtgatg cgcagcataa gatcgaggca ttgcaagagg
     2461 cgggcgctgc gctcgtccag gtagtcgccc aagcagaatc caagacccgc gccgatctcg
     2521 acgcgcaaga gcgctatcag caagaggcca gcgcctcgct ccgcaggcag atcaccgagc
     2581 tcgaggcgct gcttgagcaa gaattcaaca agatagcgga tgagaaggcg cttattcaag
     2641 cgcggctgca acaaacacgc gaggcctgcg cccgcgagac ccatcgctac acccacgaga
     2701 tcacgcggct caaagagatc ctggatagtt tcgggaaggc cgtgccgagt cacgcacccc
     2761 cttcatcgag caacccaaaa taaagggaga accatggccc aattgacacc ccttgcaaaa
     2821 ggactgatca cggtaattat cctcggcggt accggcgctg cggcctggca cttaggcttg
     2881 cgcgatctga tcacccgcga acccgcccct gc
//
LOCUS       DASQSL010001319         1391 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_34367, whole genome shotgun sequence.
ACCESSION   DASQSL010001319 DASQSL010000000
VERSION     DASQSL010001319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1391
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34367"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..759)
                     /locus_tag="VE844_13565"
     CDS             complement(<1..759)
                     /locus_tag="VE844_13565"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /protein_id="HZC02331.1"
                     /translation="MKTTTVVGLFIGTVLFLYLIIHQGVDDLMAMLMAAGWGLMAVTA
                     FHLLPLVAEAVAWRKLIRQEHRPTLAQAIHLRWICESVNGLLPGAYLGGELVRIRLAM
                     RYGMPGIVAGMSTTLDAILGAMVQGVFSLVGIAALVQLKALPAGQLGLAVGLIATLFL
                     LGLWAWIERSQTFPVLMERLVAAALKRGWKRIGRTSKLIKIELLSLLSRRGRLVSAGA
                     WRIAGWMLAVGEVWLALQFLGHPVSLTDAFMLEIV"
     gene            924..>1391
                     /locus_tag="VE844_13570"
     CDS             924..>1391
                     /locus_tag="VE844_13570"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010959510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZC02332.1"
                     /translation="MRLEDLTVIVPTRNEAANIRMFLESLPKTLALIVVDAGDDATAD
                     IVAGIRPEYSLVLRHLSPISEARQLGAKAASTPWLLFTDADVQFPLEYFERLVHQPPG
                     DAVYGPKLSRDRFQTYYRWFAYGQRLSHWLGIPAATGSNILLKGEVLTAVGGFD"
BASE COUNT          319 a          435 c          369 g          268 t
ORIGIN      
        1 gacgatctca agcataaagg catcggtgag gctcaccggg tgacccaaaa actgaagcgc
       61 gagccaaacc tcgcccacgg ccagcatcca gccggcgatc cgccaggccc cggcggacac
      121 caatcggccc cggcgagaca ataagctcaa tagttctatc ttgataagct tagaggtcct
      181 gcctatcctt ttccaacctc gcttgagcgc agccgccacc aagcgttcca taaggaccgg
      241 aaaggtctgg gatcgctcga tccaagccca aagtccgagc agaaacaggg tcgcgatcag
      301 gcccacggcg aggccaagct ggcctgctgg caatgccttt aactgcacta aggccgctat
      361 cccgactagg gagaagacac cctggaccat ggcgcccaag atggcgtcca gggtagtgct
      421 catacccgcc acgatcccgg gcatcccata gcgcatcgcg aggcgtatgc gcacgagctc
      481 cccgccgaga taagcccccg gtagaagacc gttgaccgac tcacagatcc accgcaggtg
      541 aatagcctgt gccagggtag gacggtgctc ctgccttatc agtttgcgcc aggccaccgc
      601 ttcggccacc agcggcagga gatggaaggc cgtgactgcc atgagccccc agccggcggc
      661 catcaacatc gccatcagat catcgacacc ctggtggatg atgagataga gaaataaaac
      721 cgtaccgatg aataggccga ccactgtggt cgtcttcaac cacatagatt tagaggaagc
      781 atttaatagt gttatggggg tgttttatag cgaaatctgc gttgctttac cagcctcccc
      841 ctaccctcgg gaaggcgtat ccaggtaaaa tctctgaaaa catacatagt cttccattta
      901 aacagtttat tgcggggaaa gatatgcgct tagaagatct caccgtgatc gtcccgaccc
      961 ggaacgaagc agccaatatc cggatgtttc tcgagtcact gcccaagacc ttagccctca
     1021 tcgtcgtcga tgccggcgat gatgctaccg cggacattgt ggccggcata cgccccgagt
     1081 acagcctggt attacgccat cttagcccca tcagcgaggc ccgccagctc ggtgccaagg
     1141 cggcctctac accctggctg ctattcaccg acgccgatgt gcaatttccc ctggagtatt
     1201 ttgagcgcct tgtccaccag cctcccggcg atgcggtcta cggccccaaa ctgtcgcggg
     1261 atagatttca aacctactat cgctggttcg cctatggtca gagactctcc cattggctcg
     1321 ggatccccgc cgccacggga tcgaatatcc tgctcaaggg cgaggtctta accgcggtgg
     1381 gtggcttcga t
//
LOCUS       DASQSL010001320         1222 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_132140, whole genome shotgun sequence.
ACCESSION   DASQSL010001320 DASQSL010000000
VERSION     DASQSL010001320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1222
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132140"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            37..285
                     /locus_tag="VE844_13575"
     CDS             37..285
                     /locus_tag="VE844_13575"
                     /inference="COORDINATES: protein motif:HMM:NF024736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02333.1"
                     /translation="MPAPTGHGRPRTHSLREILNAVFYLLKSGCQWRLLPHDFPGDGP
                     PFTGTSGNGVSTAPGRGSTAPSVSGCGFASKGIPSPVA"
     gene            306..521
                     /locus_tag="VE844_13580"
     CDS             306..521
                     /locus_tag="VE844_13580"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02334.1"
                     /translation="MKSTAVGGQERGYDGAKKVKGRKRHILVDTEGFVLEAKIHSARV
                     LDHEGIKMLLRRADRPGSPSKTFRRLP"
     gene            548..919
                     /locus_tag="VE844_13585"
     CDS             548..919
                     /locus_tag="VE844_13585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02335.1"
                     /translation="MLILVLAWVAFMLTVLMTCWTFDKLVRLQYASHRTKWEEDGKPC
                     GFFFRPQETRVLGGLLVTSSSSWAFQKCSFLWVLSTPEWMREDQRALRLVFGLRVLTL
                     ASTAGVGVWFLLAFLGVGEGA"
BASE COUNT          260 a          321 c          371 g          270 t
ORIGIN      
        1 ttatccgatg ccgaatggag ctacatagag cctcatttgc ccgcccccac aggacatgga
       61 cgccccagga cccacagtct ccgcgagatc ctgaacgccg tcttctacct cctaaagagc
      121 ggctgccagt ggcggctctt gccccacgac ttccctggag atggcccacc gtttactggt
      181 acttcaggaa atggcgtatc gacggcacct gggagaggat caaccgcgcc atccgtgagc
      241 ggttgcgggt tcgcctcaaa agggatcccc agcccagtag cgtaggcgtg gtggattccc
      301 agtcggtgaa gagcaccgcg gtaggcggcc aagagcgcgg ctacgacgga gccaagaagg
      361 tcaagggccg caagcgacat atcctggtag acaccgaagg atttgtgctc gaggcgaaga
      421 tccacagcgc cagggtgttg gaccacgagg ggatcaagat gctcctacgg cgagcggatc
      481 gtcctggctc gccttctaag acttttcgcc gtctgccgta gtgacaccta aactcgaacc
      541 actagaagtg ttgatcttgg ttctcgcttg ggtcgctttt atgctcacgg tgctcatgac
      601 ctgctggacg ttcgataagc tcgttcgtct tcagtacgct tcccacagga caaagtggga
      661 agaggacggc aagccttgtg gctttttctt ccgtcctcag gaaaccaggg tgttaggtgg
      721 actgttggta acgagcagca gctcgtgggc attccaaaag tgcagcttcc tttgggtgct
      781 ttcgacaccc gagtggatgc gagaagacca gcgggcacta cggctggtct ttgggctgcg
      841 tgttttgacg cttgccagca cggcaggtgt gggggtgtgg ttccttttgg cctttctggg
      901 tgtgggcgaa ggggcatagt ctatgagagg gaaacggaac gtagggctca ccatactttg
      961 tttaggctag aacagcataa tggctgtgcg gaaaggagcc aaaggagagt aacaccgata
     1021 cttgttactc tatattgtta ctctatacga gtcgatagct gtgaaaaacc gctacgatca
     1081 tacattcgat gacggcgccg ccccgcgcgg cttagcgagc tcagcggagg tagggtacag
     1141 tgtcggccca tttaccgagc tgtccagaag tgacgttcta cgaactcgct tgctttggat
     1201 acacagaggg tcgtttgcag ga
//
LOCUS       DASQSL010001321         1341 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_169851, whole genome shotgun sequence.
ACCESSION   DASQSL010001321 DASQSL010000000
VERSION     DASQSL010001321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1341)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1341)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1341
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169851"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..752)
                     /locus_tag="VE844_13590"
     CDS             complement(<1..752)
                     /locus_tag="VE844_13590"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZC02336.1"
                     /translation="MDIQSIFRCAVGMDVHLAVIHVCVILQGSGCEPEVHCRQFGAFQ
                     RDRRAMAEWIAGFAPDTVVMESTGSDFQSPYAALEQVGIRALVVNAQHVKKVPGRKTD
                     TSDAQWLAMLARAGLLRGSFIPPEPLRDLRQISRYHHRTTAMLAAEKNRLVRLLRDAG
                     IRLTAVVSDPHGVAARAMIDCLLDGGTPEQALRYAGRLKAPREELLASLQGKLSEEHL
                     FVARLIRQHIDTLETQLTDLEHPLFDQLKPYEA"
BASE COUNT          290 a          384 c          415 g          252 t
ORIGIN      
        1 gcctcatagg gtttgagctg gtcgaacaag gggtgttcga ggtcggtcaa ctgggtttcc
       61 aaggtatcga tgtgctggcg gatcaggcga gcgacgaaga ggtgttcctc actgagcttc
      121 ccctgcagag aggccaacaa ctcctcccgt ggggccttca ggcgtccggc gtaccgcagc
      181 gcttgttcgg gcgtgccgcc atcgagcagg cagtcgatca tggcgcgggc tgccaccccg
      241 tgggggtcgg agacgaccgc cgtgaggcgg atgccggcat cgcgcaagag gcgcaccagg
      301 cggtttttct ccgccgccaa catggccgtg gttcggtggt ggtagcggct gatctggcgc
      361 aagtcacgca aaggttctgg cgggatgaaa ctgccgcgca gcaacccggc gcgtgccaac
      421 atcgccagcc actgggcatc gctggtatcg gtcttgcggc cgggcacctt cttgacgtgc
      481 tgggcattga ccaccagcgc ccggatgccg acctgctcca gagcggcata ggggctttgg
      541 aagtcactgc ccgtgctctc catgaccacg gtgtcgggag caaagcccgc gatccactcg
      601 gccatggcgc gtcggtcacg ctggaaggca ccgaactggc ggcaatgaac ctcgggttca
      661 caaccggatc cttggagaat cacacagacg tggatgacgg ccagatggac gtccatgccg
      721 acagcacagc gaaagataga ttgaatatcc atggggacct ccttggagac aaagggttga
      781 gaaatgacac ctgtggaggt ccgccatggc cccaatggct cctgaccagc cgatgtcgac
      841 tcctatggga gccgatccgt gaaggtcggt taggttgccg tgcgcgctca aaggcagcag
      901 tcgggggtac aagtcggggc cacagggtca tgttgagcaa cggagtcgaa ctaccattcc
      961 tacagcggcc ttgggtgata cccctcttgg cataaggtac tttcatccac aggggtgtca
     1021 atgcccaatg aaatgaatgt tggggtgagc aacgcgaacc ccaacaatcg gacatcccat
     1081 cccccaacac gggcacggcg gtagttcatg aaaacctccc acaacccatg aagccgtgaa
     1141 ttttaccgca acctcacatc agttgttggg gttcgcaggg ctcaccctaa catgtcatgg
     1201 cgattgactc gccgcccctg aagatgaaaa atacaggtgc ttcatcaacc gttacctgac
     1261 gttagaggta ccttgcagct ctgacgcacg ttctgggagc gtcatggaaa acagacggtt
     1321 agcgataagc gaaaagaatt t
//
LOCUS       DASQSL010001322         1737 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_115287, whole genome shotgun sequence.
ACCESSION   DASQSL010001322 DASQSL010000000
VERSION     DASQSL010001322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115287"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..809
                     /locus_tag="VE844_13595"
     CDS             <1..809
                     /locus_tag="VE844_13595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006787923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HZC02337.1"
                     /translation="KRGLVIMVGGTGSGKSTSLAAMINHRNENSFGHILTVEDPIEFV
                     HPHKNCIVTQREVGVDTEGWEIALKNSLRQAPDVILLGEIRNCQTMQFGIEFAETGHL
                     AMATLHANNANQALDRIINFFPEERRPQLLMDLSLNLKAVISQRLLKQRTGAGRAAAV
                     EIMLNTPLVADLILKGEVHELKGIMARSTELGMKTFDQALFDLYEADRISYEDALRNA
                     DSMNELRLRIKLEGKATKAKDKLEDLGHLSLEDKEEDPGLQGFVSYYNKP"
     gene            820..>1737
                     /locus_tag="VE844_13600"
     CDS             820..>1737
                     /locus_tag="VE844_13600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020168298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HZC02338.1"
                     /translation="MDILPYLKLLIEKQGSDLFFSSGAQIKMKIEGNTVSVGKTILDQ
                     DMTRSAAFGIMNERQIQLFETNWEADFAIELPDKSNRFRVNVFRQRGEVAMVLRRIPN
                     HIPAVEELGLPSVLKQLITHKRGLILMVGATGSGKSTTLAAMIAYRNEKISGHILTVE
                     DPIEFIHPHLKSIVNQREVGIDTQSYQHALKAAMREAPDVILIGEIRDRESMEAALEL
                     CNTGHLCLSTLHANNALQALERVINLFPPNRHKQLYMDLGLNIRAVISQRLAMGLNGK
                     RCAAVEIMINTPLVADLILKGEIAEIKGAM"
BASE COUNT          418 a          466 c          479 g          374 t
ORIGIN      
        1 ccaagcgggg cttagtgatc atggtgggtg ggaccggctc aggtaagtcg acttcgctcg
       61 cggccatgat caatcatcgt aacgaaaata gcttcgggca tatcctgacg gtagaggatc
      121 ccatcgagtt tgttcatccc cataagaatt gcattgttac tcagcgtgag gtcggtgtgg
      181 ataccgaggg ctgggagatc gcgctcaaaa actccttgcg ccaagccccg gatgtcattc
      241 tccttggcga gatccgcaac tgccagacca tgcagtttgg gatcgagttt gccgagacgg
      301 gccatctcgc catggcgacc ctgcatgcca acaatgccaa tcaggcgctc gatcgcatca
      361 tcaatttttt cccggaggaa cgccgaccac aactgttgat ggatctctcg ctcaacctca
      421 aggccgtgat ctcacagcgg ctgctgaagc agagaaccgg ggcgggacgg gccgcagcgg
      481 tcgagatcat gctcaataca ccgctcgttg cggatctcat cctcaagggt gaagtgcatg
      541 aactcaaagg gatcatggcc cggtccaccg agcttggcat gaagaccttt gatcaagccc
      601 tatttgatct ctatgaggct gatcggatca gctatgagga tgcgttgcgc aatgccgatt
      661 caatgaacga attgcgcctg cgcatcaagc ttgaaggcaa ggcgacgaag gccaaggaca
      721 agctggaaga tctcggccat ctgagcctcg aagacaagga agaagatcct gggctgcagg
      781 gatttgtatc ctattacaac aagccatagg tgaacacgct tggacatcct tccttatctc
      841 aagttactga ttgaaaagca aggctcggat ctgttcttta gttcgggcgc ccaaatcaag
      901 atgaagatcg aaggcaatac cgtttcagtg ggaaagacca tcctcgatca ggatatgacc
      961 cgatcggcgg ccttcggcat catgaacgag cgtcagatcc agctgtttga aaccaattgg
     1021 gaggccgatt ttgccatcga gctccccgat aaatcgaacc gattcagggt aaacgtgttt
     1081 cggcagcggg gtgaggtggc catggtcttg cgccggatcc caaaccacat ccccgctgtc
     1141 gaggagctcg gactgcccag tgtgctcaag caactcatca cgcacaaacg gggtttgatc
     1201 ttaatggtag gggcgaccgg ctctggtaaa tcgacgacgc tggcggcgat gatcgcttac
     1261 cgtaacgaaa agatatccgg ccatatactg acggtcgagg accccattga attcatccat
     1321 ccccatctca aatccatcgt caaccagcgg gaggtgggaa tcgacacaca atcgtatcaa
     1381 catgcgctta aagcggccat gcgcgaggcg ccggatgtga tcctgatcgg tgagatccgc
     1441 gatcgcgagt ctatggaagc ggcgcttgag ctctgcaata ccggccacct ttgtctttcg
     1501 accctgcatg ccaataatgc cctgcaagcg cttgagcggg tgatcaacct cttcccgcct
     1561 aaccggcata aacaactcta tatggatctc ggcctcaata ttcgcgcggt tatctcgcag
     1621 cgtttggcca tggggctcaa tggtaaacgg tgtgcggcgg ttgagatcat gatcaatacc
     1681 cctttagtcg cggatctgat cctcaaaggc gagatagccg agatcaaggg ggcgatg
//
LOCUS       DASQSL010001323         1036 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_188269, whole genome shotgun sequence.
ACCESSION   DASQSL010001323 DASQSL010000000
VERSION     DASQSL010001323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188269"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(234..674)
                     /locus_tag="VE844_13605"
     CDS             complement(234..674)
                     /locus_tag="VE844_13605"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HZC02339.1"
                     /translation="MSEENKALVRRFAEEFWNEGDTTAVDELIATDAAIHMPTGEVVD
                     PEGLKSFAAMWRESFPDWHSSFEELIAEGDKVAERWTGRGTHQGELQGIPATGRRVEV
                     PGSVFYRIVDGKIVEFRGQLDIMSLMQQIGAVPGPEQSEEASPT"
BASE COUNT          204 a          321 c          270 g          241 t
ORIGIN      
        1 ggaaactcag aggggccacg ggcataaaaa gagccggggc tgttagagac cccggccctt
       61 gcgcagcgct accttacctt agatgttggc cggtaagaag gggttagctt ccagtgggcg
      121 ggcgacgcac tcagcaccct cggggatttc gaatccccag tcctgggggt tagctaggta
      181 ttcctgacag agatccatgg taggaaaaca gtattcgggt tgcggttgcc tacctaggta
      241 gggctggctt cctccgactg ttctggccca gggacggcac ctatctgctg catcaggctc
      301 attatgtcga gctggcctcg aaactccacg atcttaccgt ccacaatccg gtagaagacg
      361 ctacctggca cctcaacgcg cctacctgtg gcaggtatgc cctgcagctc gccttggtgt
      421 gtgccccgac cagtccaccg ctcggccacc ttgtctcctt ccgcaatcaa ctcctcgaag
      481 gaggagtgcc agtcagggaa tgactctcgc cacatggcgg cgaaactttt aagcccttca
      541 ggatcgacca cttctcccgt aggcatgtgg attgcagcgt cggtcgctat tagctcgtcc
      601 acagcggtcg tgtccccctc gttccagaac tcctccgcaa aacggcgtac tagcgccttg
      661 ttctcttctg acacagggaa cgcctcctcc ttcctcccac cgccttgctg tggcaggcta
      721 tcacctagga ccgctgtatc atcccatctg ggggacttcc gcgcatccct ctattcactg
      781 tattgcctag aacggacaag cccggaaact gacagggcag gctttatgca acgcttaagt
      841 tttctagtgt ccgtgtcgat aaaagaaagc cgggctggga tgcagccttt tacaaagggt
      901 gtagctacaa ccacctacaa acccagtccg gcgctctctt cttccggtag cctaggtcct
      961 ctatacccgc ttctattccg gggaaacgac tttgttctgc catccggcgt caacaggctt
     1021 ctttgtgtcg cgattt
//
LOCUS       DASQSL010001324         1310 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_132197, whole genome shotgun sequence.
ACCESSION   DASQSL010001324 DASQSL010000000
VERSION     DASQSL010001324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1310
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132197"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(170..1255)
                     /gene="apbC"
                     /locus_tag="VE844_13610"
     CDS             complement(170..1255)
                     /gene="apbC"
                     /locus_tag="VE844_13610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018954435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HZC02340.1"
                     /translation="MLSREQVESALAHYIDPYLGADLLAAKAVKNLAIQGDRVAIDIE
                     LGYPIQGYRDRLNAALKEAIANATGATEIAVNLSTKIVAHAAQKGTTPLPHVKNIIAV
                     ASGKGGVGKSTVAVNLALALQAEGAQAAILDADIYGPSQPTMLGCRGRPESKDGKTLE
                     PLVSYQVQAISIGHLIDEETPMIWRGPMVTSALQQLLTETNWRNVDYLVVDLPPGTGD
                     IQLTLCQKIPVSGAVIVTTPQDIALLDARKALKMFEKVEVSVLGIIENMSLHICSRCG
                     HEEYIFGQGGGTRMAAQYSVELLGSLPLDIHIREGVDHGRPTVVMQPDSPIAQIYRDI
                     ARKVAAKLSLRAKDYSARFPKIVIQKT"
BASE COUNT          280 a          351 c          389 g          290 t
ORIGIN      
        1 ctacgagaca gggctgaatc acagcttact ttttaaatat accacttcct caaataaatc
       61 acagacggta aagggcacaa cggtattttt gaacctcgcc atggcgatcc caagcgtaat
      121 cgcatagaag cacacgaagg gcgggactac gaaattgtca aatgacccac taggtctttt
      181 gaatgacgat cttcgggaac ctggcggagt aatccttggc ccggagtgag agttttgccg
      241 ctaccttgcg ggcgatatcg cggtagatct gggctatagg cgaatcgggc tgcatcacca
      301 cagtaggacg gccatggtct acgccctcgc ggatgtggat gtcgagtggc aggctgccga
      361 gcaattctac gctatactgc gccgccatcc gggtcccgcc cccctggccg aagatatatt
      421 cctcgtgccc gcaccggctg cagatatgca ggctcatgtt ttcgatgatc ccgagcaccg
      481 aaacctctac cttttcaaac atcttgaggg ccttgcgcgc atcgagcagg gcaatatcct
      541 ggggggttgt cacgatcacc gcgccgctga ccgggatctt ttggcacagg gtcagctgga
      601 tgtcaccggt gccggggggc agatccacca ccagataatc gacattgcgc cagttagtct
      661 cggtcaacaa ttgctgaagc gcagaggtga ccatagggcc gcgccagatc atgggtgtct
      721 cttcatcgat gagatggccg atggagatcg cctggacctg gtagctgact aaaggctcca
      781 acgtcttgcc gtccttcgat tcgggccggc cgcggcagcc gagcatggta ggttggctcg
      841 ggccatagat gtcggcatcg aggatcgcgg cctgggcgcc ctcggcctgg agtgcaagcg
      901 caagattgac ggctaccgtg gatttaccga caccgccctt gcctgaggcg acggcgatga
      961 tattcttgac atggggcagg ggggtcgtgc ccttctgggc agcgtgcgcg acgatcttgg
     1021 tgctgagatt gacggcgatc tcggtggcgc cggtagcgtt ggcaatggct tccttgagag
     1081 cggcattcaa tcggtctcga tagccttgga taggatagcc gagttcgata tcgatggcca
     1141 ccctgtcgcc ttggatggcg agattcttga ccgccttggc agcgagcaga tctgctccca
     1201 gatacggatc gatatagtgg gctaaggctg attcaacctg ttctcttgat aacatgactc
     1261 aaacggggaa cattatacat aagattttac actaaaaatg ggcttgcgcg
//
LOCUS       DASQSL010001325         1232 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_197475, whole genome shotgun sequence.
ACCESSION   DASQSL010001325 DASQSL010000000
VERSION     DASQSL010001325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1232
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197475"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1232
                     /locus_tag="VE844_13615"
     CDS             <1..>1232
                     /locus_tag="VE844_13615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017939978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HZC02341.1"
                     /translation="HQGTCPSARFADHPCDLKGNNDLLTLTRPDIIGAIHRAYLEASA
                     DIIETNTFNSTAIAMADYRLEDRAYTLNREGTRLARAIADEFEAKDPMQPRFVAGALG
                     PTNRTASISPDVNNPGFRNITFEQLVVAYTEAVQGLLEGGADLLLVETIFDTLNAKAA
                     LFAIDQYFEDHGIEVPILISGTITDLSGRTLSGQSTEAFWNSVRQARPLSIGLNCALG
                     ATELRPYVKELARLANTYVSLHPNAGLPNEFGGYDDTPEYMAGLLKEFAESGFLNIVG
                     GCCGTTPEHIRAIAEAVHGLPPRRVPEIPRYCRLSGLEPLNITPETNFVNVGERTNVT
                     GSPKFAALIKNGDFEGAVEIARQQVENGAQIIDINMDEGMLDSEEYMHRFLNLIAAEP
                     DITRVPVMIDSSKWSVIER"
BASE COUNT          247 a          388 c          341 g          256 t
ORIGIN      
        1 catcagggga cctgcccgag tgcgcgtttt gcggatcacc cctgtgatct caagggcaat
       61 aacgatctgc ttaccctgac ccggccggat atcatcggcg cgatccaccg cgcctatctg
      121 gaggccagcg ccgacatcat cgagaccaat accttcaatt cgaccgctat cgccatggcc
      181 gattatcgcc tggaggatcg ggcctatacg ctgaatcgtg agggtacgcg tctcgcccgc
      241 gcgatcgccg atgaattcga agccaaagac cccatgcagc cgcggttcgt agccggtgct
      301 ctagggccta ccaaccgtac cgcctcgatc tcgccggatg tcaataaccc aggttttcgc
      361 aacatcacct tcgagcagct agtggttgct tataccgagg ccgtgcaggg tctgctcgag
      421 ggcggtgcag atctgttgct ggtcgagacc atcttcgata cgctcaatgc caaggccgcc
      481 ctcttcgcta tcgatcagta tttcgaggat cacggtatcg aggtgcctat cctgatctcg
      541 ggcacaatca cggatctcag cggccgcacc ctctccggcc agtccaccga agccttctgg
      601 aactcggtac gacaggcgcg cccgctctca atcggtctca attgcgcatt gggtgcgacc
      661 gagctgcggc cctacgtcaa agagctggcc cgcctggcga atacctatgt cagcctccat
      721 ccgaatgccg gactccccaa tgagttcggc ggctatgacg atacccccga gtacatggca
      781 gggctgctca aggaatttgc cgagagcggc tttctcaata tcgtcggtgg ctgctgcggc
      841 acgacacctg aacatatccg ggctattgcc gaagctgtac atggcctccc gccgcgtcgt
      901 gtccccgaga tcccgcgtta ttgccggttg agtggtcttg agcctctcaa tattacgccc
      961 gagaccaatt tcgtcaatgt cggcgagcgt accaatgtga ccggctcacc caagtttgcc
     1021 gccctgatca agaatgggga cttcgagggg gcggtcgaga tcgcccgcca acaggtcgag
     1081 aacggcgccc agatcatcga tatcaacatg gacgagggta tgctggattc ggaggaatat
     1141 atgcaccgct tcctcaacct catcgctgct gagcctgata tcacgcgcgt gccggtgatg
     1201 atcgactcct ccaagtggag cgtgatcgaa cg
//
LOCUS       DASQSL010001326         1079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_104461, whole genome shotgun sequence.
ACCESSION   DASQSL010001326 DASQSL010000000
VERSION     DASQSL010001326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104461"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1079
                     /locus_tag="VE844_13620"
     CDS             <1..>1079
                     /locus_tag="VE844_13620"
                     /inference="COORDINATES: protein motif:HMM:NF012435.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HZC02342.1"
                     /translation="YMVIIGWVLAYLYYSIGTQWGSDTEGFFLGNFIGLSDSFWSVGG
                     IQLKVLIPFVVAWAIVYWLMVRGVSRGIQVSAMVLIPLMALMMLIIVIRGITLPGAGE
                     GLTVLFTPDFGALIDPQVWIAAYGQVFFSIGVAFSIMIAYASYLPRRSELPNSGFIVA
                     LSNSGFEFFAAIGVFSVLGFLAVQQNARVDEVVGQGVILAFVTFPQIINQLPALNALF
                     GFLFFGALLFAGLTSAVSILEVGVVALRDKFGLSRTRAVNIVCGLAFLIGLIYLTKGG
                     LYYLDTIDHFINNFGLVLSGLIEVILVAWVVRRLRDLQRFINEDAYISVGGWWILFLS
                     IVTPLILIVITAFNIYTELTTAYEG"
BASE COUNT          179 a          329 c          307 g          264 t
ORIGIN      
        1 actacatggt cattatcggg tgggtgctcg catacctcta ttactccatc ggaacccagt
       61 ggggctcgga caccgaggga tttttcctgg gcaacttcat cgggctcagc gatagcttct
      121 ggagcgtggg cggcatccag ctcaaggtcc tgataccctt cgtggtcgcg tgggccatcg
      181 tctactggct gatggtccgc ggcgtcagcc gggggataca ggtctccgcg atggtcctga
      241 tccctctgat ggccctcatg atgctcatca tagtgatccg tggcataacg ttgcctgggg
      301 cgggagaagg cttgaccgtc cttttcaccc ccgacttcgg agcgctcatc gacccgcagg
      361 tgtggatagc agcctacggg caggtcttct tctccatagg cgtcgcgttc tcgatcatga
      421 tcgcctatgc cagttacctt ccccgacgct cggagctccc caacagcggc ttcatcgtgg
      481 ctctctccaa cagcggcttc gagttcttcg cggccatagg cgtcttcagc gtcctgggct
      541 ttttggctgt ccagcagaac gcgcgggtgg atgaggtggt cggccagggg gtgatcctcg
      601 ctttcgtaac cttcccgcag atcataaacc agcttccggc gctgaacgct ttgttcgggt
      661 tcctgttctt cggggcgctg ctcttcgccg gactgacctc cgccgtatcg atcctcgagg
      721 tcggcgtcgt cgcgctgcgg gacaagttcg gcttgtctcg cactagagcg gtaaacatcg
      781 tgtgtggact cgcgttcctg atcgggctta tctaccttac gaagggtggc ctatactacc
      841 tcgataccat cgaccacttc atcaacaact ttggcctggt actctccgga ctcatcgagg
      901 tcatcctggt ggcttgggtg gttcggcggc tcagggacct ccagcggttc atcaacgagg
      961 acgcgtacat cagcgtaggt ggctggtgga tcctcttcct ctccatcgtc acacccctaa
     1021 tcctgatcgt gataacggcc ttcaacatat acaccgagct gacaacggcc tatgaaggc
//
LOCUS       DASQSL010001327         2310 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_159814, whole genome shotgun sequence.
ACCESSION   DASQSL010001327 DASQSL010000000
VERSION     DASQSL010001327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2310
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159814"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..121)
                     /locus_tag="VE844_13625"
     CDS             complement(<1..121)
                     /locus_tag="VE844_13625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013032271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homogentisate 1,2-dioxygenase"
                     /protein_id="HZC02343.1"
                     /translation="MLHWISLPKVEGTASRQAHADLPADTFERELSKEGFYGPS"
     gene            complement(123..1220)
                     /gene="hppD"
                     /locus_tag="VE844_13630"
     CDS             complement(123..1220)
                     /gene="hppD"
                     /locus_tag="VE844_13630"
                     /EC_number="1.13.11.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020564183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003868 - 4-hydroxyphenylpyruvate
                     dioxygenase activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylpyruvate dioxygenase"
                     /protein_id="HZC02344.1"
                     /translation="MIASTNNPMGTDGFEFIEYTAEDTQTLAGLFERMGFTAVARHRS
                     KEVVLYRQGDINFIINHEPDSFGQGFARRHGPSVCAFAIRVKDATRAYKRAIELGAEP
                     FRGMIGPMELNIPAIRGIGGSLIYLVDRYGENRSIYDVDFIPLETGRRSSLPWVPGVG
                     LTEVDHLTHNVQEGRMDEWAQFYERLFNFKEIRYFDIHGQVTGLRSRAMISPCGKIRI
                     PINEPSDPKSQIQEYLKIYHGEGIQHIALSTGNIYTTVERLGDNGIRFMEVPKTYYEA
                     IDRRIPGHSEDLDRLRKNRILIDAAPHLGPLPNRERKGIGLLLQIFTETVIGPIFFEI
                     IERKGNEGFGEGNFQALFEAIERDQMRRGVI"
     gene            complement(1329..2213)
                     /locus_tag="VE844_13635"
     CDS             complement(1329..2213)
                     /locus_tag="VE844_13635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020716178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004833 - tryptophan 2,3-dioxygenase
                     activity [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan 2,3-dioxygenase family protein"
                     /protein_id="HZC02345.1"
                     /translation="MLSYNEFMTSPKGNSHRELEAGIHLDLQDHLTYAGYLGLDRLLS
                     AQHPLSDPPHHDELLFIIQHQTTELWFKLILHELRAACGHVRGDTLDPCFKILARIKL
                     IQRQLFEQWGVLETLTPSEYVQFRHVLGPASGLQSPQYRAIEYLLGNKNPAVLEIFRY
                     DPKVYQELKHVLESPSIYDEFLLHLYRQGHAVPRECVERDWSQPYQRNPKLIPVFKAI
                     YANPDTYWDAYEMCEKLVDVEENFQLWRFRHMKTVERIIGYKRGTGGSSGVGFLRQAL
                     DLTFFPELFDVRTEIGAS"
BASE COUNT          520 a          630 c          638 g          522 t
ORIGIN      
        1 tggaaggtcc ataaaagccc tccttgctga gctcacgctc aaaggtatcc gcaggcaagt
       61 cggcatgggc ctggcgggag gcggtgcctt caaccttagg cagcgagatc caatgcaaca
      121 tctcaaatca ccccccgtct catctgatcg cgttcgatgg cctcaaacag cgcctggaaa
      181 ttaccctcac caaaaccctc attgcccttg cgctcgatga tctcaaagaa gatcggaccg
      241 atcacggtct cggtgaagat ctgcaggagt aaacctatcc cctttcgctc tctgttgggg
      301 agaggaccaa ggtggggggc agcgtcgatg aggatgcgat ttttacgcag gcgatcgaga
      361 tcttcactat gccctgggat acgcctatcg attgcctcgt aataggtctt tggcacctcc
      421 ataaaacgga tgccattgtc accgagccgc tccaccgtcg tatagatatt ccccgtgctc
      481 agggcaatat gttggatccc ttcgccgtga tagatcttga gatattcctg gatctgcgat
      541 ttgggatcgg aaggctcatt gatggggatg cggatcttgc cacaggggct gatcatcgcc
      601 cgcgagcgga gtccggtcac ttgcccgtgg atatcaaaat aacgtatctc tttgaaatta
      661 aataggcgtt cgtagaactg cgcccactcg tccatacggc cttcctggac gttatgggtt
      721 agatgatcca cctcggtcag tcctaccccc ggcacccatg gaagagagga gcgtcggcct
      781 gtttccaagg ggatgaaatc gacatcgtag atcgagcggt tttccccata acggtccacc
      841 aggtagataa ggctcccgcc gatgccccgg atcgccggga tattgagctc catcgggccg
      901 atcatacccc ggaaaggttc ggccccaagc tcaatcgccc gtttataggc cctggtcgca
      961 tctttgaccc ggatcgcaaa agcgcacacc gaaggcccgt gccgcctggc gaaaccctga
     1021 ccgaagctgt cgggttcatg attgatgatg aaattgatat cgccctgccg gtaaagcacc
     1081 acctccttgg agcggtggcg cgcaacagca gtgaaaccca tgcgttcaaa gaggcccgcc
     1141 agggtctggg tatcctcggc ggtgtattca atgaactcga agccatcggt acccatgggg
     1201 ttgttggttg aggctatcat tacgcctatc tcactcgtca cataacttat aaaatatgcc
     1261 tagcacaata gacctgttta gtccgtcaaa gattccggaa tcaatgggtt tctcgaaggc
     1321 caggtgcttc aggacgcccc gatctcggtg cggacatcga agagttccgg gaaaaaggtc
     1381 aaatcgaggg cctgtcttag aaaccccacc cctgaggaac cgcctgtccc gcgcttgtaa
     1441 ccgatgatgc gctcgacggt cttcatgtgg cggaaccgcc aaagctgaaa gttttcctcg
     1501 acatccacca gcttctcgca catctcatag gcgtcccaat aggtgtccgg gttagcgtaa
     1561 atagctttga ataccggaat aagcttggga ttgcgctgat aaggctgcga ccagtcgcgc
     1621 tcgacacact ccctgggcac ggcatggcct tggcggtaca aatggagtaa gaactcatcg
     1681 tagatactgg ggctttcgag gacatgcttc aattcctggt aaactttagg atcatagcgg
     1741 aagatctcaa gcacggcagg gttcttattg ccgagcaggt attcgatagc gcggtattgc
     1801 ggggattgta agcctgaggc tggtcctaag acatgccgaa actggacgta ttcgctcggg
     1861 gtcagggtct ccagcacccc ccattgctcg aacaactgcc gctggatcag cttgatccga
     1921 gccaggatct tgaaacaggg gtcgagtgtg tcaccgcgca catgaccgca ggcggccctc
     1981 agttcatgca gaatgagttt gaaccagagt tccgtggtct gatgctggat gatgaacagc
     2041 agctcatcgt gatggggtgg atcgctcagc ggatgctggg cgctcagcag tcggtcgagg
     2101 cccagatagc ccgcataggt caggtggtcc tgaagatcca ggtgtatgcc tgcttccagt
     2161 tcacggtgac tgttgccttt gggggacgtc ataaactcat tatagctcag catccagtgt
     2221 ttcccctcct tttaacaggg gccagccatg cggaagacga tgaggggcgg tagggggagg
     2281 cgttctaaat atacctctat acctcgattt
//
LOCUS       DASQSL010001328         1075 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_115324, whole genome shotgun sequence.
ACCESSION   DASQSL010001328 DASQSL010000000
VERSION     DASQSL010001328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1075
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115324"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1075)
                     /locus_tag="VE844_13640"
     CDS             complement(<1..>1075)
                     /locus_tag="VE844_13640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014260909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /protein_id="HZC02346.1"
                     /translation="AVRSSATAEDLPEASFAGQQETFLNVTGEAELLEACRHCYASLF
                     TDRAISYRQEKGFDHLDVALSVGVQKMVRADTAGAGVMFSIDTETGFPDVVVINAAWG
                     LGENVVQGTITPDQYTVFKPFLQRQELCPIIEKSLGTKEKKMVYSKTDGQRTQNVETR
                     KSERQSFVLHDAEILRLARWACGIEQHYGQLMDIEWAKDGESGELFIVQARPETVHSQ
                     DETNSLKTYTLQEQGRRLLIGQSVGQSIAAGKVCLIKSSSDIDQFEEGSILVTEMTDP
                     DWVPIMKQAKGIITDHGGRTSHAAIVSRELGIPAIVGTGEATDTLQHGQDITLSCAEG
                     DEGYVYEGILAFEAAEAKLDEVPK"
BASE COUNT          203 a          329 c          284 g          259 t
ORIGIN      
        1 cttcggtacc tcgtcaagct ttgcctctgc cgcctcgaaa gccaggatgc cctcatatac
       61 gtagccctca tccccctcgg cgcacgacaa tgtgatgtct tgcccatgtt gcagcgtgtc
      121 cgtggcctct ccggtcccga caatggctgg aatccctagc tcgcggctga caatggcggc
      181 atgcgacgtg cgtccaccat ggtcggtgat aatgcctttg gcctgtttca tgatcggcac
      241 ccaatcggga tcggtcatct cggtgaccaa aatcgagccc tcttcgaact ggtcgatgtc
      301 actcgaactt tttataagac agaccttgcc cgcagcgatc gattgaccaa cactctggcc
      361 tatcagcaat cgcctgccct gctcctgaag tgtgtaggtt ttgagtgaat tcgtctcatc
      421 ttgcgagtgg acggtttccg ggcgggcctg cacgatgaac aactcgccgg actctccatc
      481 cttggcccat tcgatatcca tgagctggcc atagtgctgc tcgatgccgc aggcccagcg
      541 cgccagtcgc aagatctcgg catcgtgcag cacgaatgac tggcgttcac tcttccgggt
      601 ctcgacgttc tgggtcctct ggccgtcagt cttgctgtag accatctttt tctctttggt
      661 acccagagat ttttcgatga tggggcacag ctcttggcgc tgcaagaatg gtttaaagac
      721 agtatattga tccggcgtaa tcgtcccttg cacgacgttt tcacccaatc cccaggcggc
      781 attgatgacg acgacatccg ggaagccggt ctctgtatcg attgaaaaca tgaccccggc
      841 accggcagta tccgcccgca ccatcttttg cactcccact gacagcgcca cgtcgagatg
      901 gtcaaagccc ttctcttgtc ggtagctgat ggcacggtcg gtgaacaatg acgcatagca
      961 atgacggcat gcttcgagga gttcagcctc gccggtgacg ttcagaaagg tctcctgctg
     1021 gccggcgaaa ctcgcctcgg ggagatcttc cgcggtcgcg ctactgcgta ctgcg
//
LOCUS       DASQSL010001329         1064 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_63796, whole genome shotgun sequence.
ACCESSION   DASQSL010001329 DASQSL010000000
VERSION     DASQSL010001329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63796"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(188..799)
                     /locus_tag="VE844_13645"
     CDS             complement(188..799)
                     /locus_tag="VE844_13645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02347.1"
                     /translation="MRKPSPSPILLHTEQINSVPLLLGIIEQMGIRSLIDAHVRPHGF
                     WQGASVGTLVSIWLCHILAERDHRLVAVRDWVAQRVVTFNTLLDTTLRDIDCTDDRLA
                     NVLSMLGDAPTQASLDEAMLQRWIRVYRLPTETMRLDSTRVSVYHDTVDDESLLHQGH
                     SKDHRPDLRQFKAMLASLDPLGLPLVCQPVAGNRADEGLYVPV"
BASE COUNT          226 a          315 c          308 g          215 t
ORIGIN      
        1 acgtcgcctg gcgcgtcagc gcctgctcac gccagagagc aagctcctca gtggccgagg
       61 ggggccgata agcacacaag taagcgcttt gccccgccac catatggcca cgtgtggcca
      121 aggctcccat tttgctatcg cccaccacca ccaccgacaa gatgccaagc gccttgatgg
      181 ctgcctgcta gactggcaca tacaagccct catcggcacg gttgcccgcc accggctggc
      241 ataccagtgg caaacccaac ggatcgagtg aggccagcat ggctttgaac tgtctcaagt
      301 ccggacgatg atctttgctg tgcccctggt gcaaaagact ctcgtcgtcc accgtgtcgt
      361 gatagacact cacacgggta ctgtcgaggc gcatggtctc ggtaggcaag cggtatacgc
      421 gtatccaacg ctggagcatc gcctcatcga ggctggcctg cgtgggcgca tcgcccaaca
      481 tgctcagcac attggccagg cgatcatcgg tgcagtcaat gtcgcgtagg gtggtatcga
      541 gcaacgtatt gaaggtcacg acacgctgcg ccacccaatc gcgcacggcg accaagcgat
      601 ggtcgcgctc agccaggata tggcataacc agatgctcac caaggtgccg acactcgcgc
      661 cctgccaaaa gccgtggggc ctgacatgag catcgatcag gctccggatg cccatctgct
      721 caatgatgcc aagcaggaga gggacactgt tgatctgttc cgtgtgcagg aggattggag
      781 agggagaagg cttcctcact tctctccttg gtgggatgac aaggcccatg gttggttgat
      841 gacctcatga tggggtcgac ggcatgtacc tgcactctga ctgtgggata tcgtttgacc
      901 atcctaccac atcgtgtcta aaccagggaa tcaatctacg cgaatcataa gttgtaatga
      961 tctcgattcg ctgcccttgg aggtgccctt gaatgggatg ggcgtggcgc ctccacctca
     1021 ataatccacc ctagggtttg ttgtcgggtc gagagtaggc gccg
//
LOCUS       DASQSL010001330         1578 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_132324, whole genome shotgun sequence.
ACCESSION   DASQSL010001330 DASQSL010000000
VERSION     DASQSL010001330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1578
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132324"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..584
                     /locus_tag="VE844_13650"
     CDS             <1..584
                     /locus_tag="VE844_13650"
                     /inference="COORDINATES: protein motif:HMM:NF017555.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DALR anticodon-binding domain-containing
                     protein"
                     /protein_id="HZC02348.1"
                     /translation="DLEELLTRAAHNYAGRVDEASVVPQVFDFMMERLRGYYLEDGVT
                     ADIFEAVLARRPKRPYDFGQRLLAVVAFRKLPEAESLASANKRIGNILRQATGIRPLA
                     ALDKSLLREPAEAALARELGRIHAMVQPKLQHRDYTGVLTDLAGLRNSVDSFFDQVLV
                     MCEDQSLRCNRLTLLHKLNGLFLEVADISRLQG"
     gene            595..1176
                     /gene="dcd"
                     /locus_tag="VE844_13655"
     CDS             595..1176
                     /gene="dcd"
                     /locus_tag="VE844_13655"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009394 - 2'-deoxyribonucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HZC02349.1"
                     /translation="MKLSDVHLQERLARGDLKIAPPVPKAHFGSFSVDLRLANQFRVF
                     KRTQYPFIDLGSLEGSFSMSEEVMEEIEIDEGGAFYLHPGELALGVTVERITVPDDLV
                     GWLDGRSSLARLGLMIHITAHTIDPGWDGRITLEFANIGRFPLALRPGMRICAVSFEP
                     LSGPTSKPYRVKQGAKYWGQDSPLSSRIDKERE"
     gene            complement(1280..>1578)
                     /locus_tag="VE844_13660"
     CDS             complement(1280..>1578)
                     /locus_tag="VE844_13660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02350.1"
                     /translation="LTAIKAGQEDMVQPILDNLTVLQEECERLRALIAKQMERLCELR
                     TVPPYCYAMQLKDERWMAAKIAALEAEIAHEEQIQQHILLTLESMLDSLCATKH"
BASE COUNT          324 a          423 c          462 g          369 t
ORIGIN      
        1 tggatctcga agagctgctc acgcgcgcgg cccataacta tgcgggccga gtggacgagg
       61 caagcgtggt gccgcaggta tttgatttca tgatggaacg tttacgcggc tattatctag
      121 aggatggcgt cacggctgat atcttcgaag cagtcctggc gcggcggcca aagcggcctt
      181 acgattttgg ccagcggttg ctcgcagtcg tagcattccg aaagctgccc gaggccgaaa
      241 gtctcgcttc tgccaacaag cggatcggca acatcttaag acaggccacc ggaatccgtc
      301 ctttggctgc gctggataag agccttttgc gtgaaccggc ggaagcggcg ctcgctcggg
      361 aacttggcag gatccatgcg atggtgcagc caaaattgca acaccgagac tatactggag
      421 tattgaccga tctcgcgggc cttcggaaca gtgtggatag cttctttgat caggtgctcg
      481 taatgtgtga ggatcagtca ttgcgctgca accggctgac acttttgcat aagctcaatg
      541 gcttatttct tgaggtcgcc gatatctcac ggctgcaagg ttgaaaggta gccgatgaag
      601 ctctccgacg tgcatcttca agagcgattg gcgagggggg atctcaagat cgcacctccc
      661 gtcccgaaag cgcattttgg atcgttttcg gtcgatctca ggcttgccaa tcagtttcgg
      721 gtgttcaagc gtacccagta tccttttatt gatttgggct ccttagaagg gagcttctcc
      781 atgtccgagg aagtgatgga ggagattgaa atcgatgaag ggggtgcctt ttatctgcac
      841 ccgggggagt tggccctagg ggttacggta gagcggatca ccgttcccga cgatctggtc
      901 ggctggctcg atggacgcag cagcctggct aggctcggat tgatgatcca catcactgcc
      961 cataccatcg atcccggttg ggatggtcgc atcacacttg aattcgccaa tatcggccgg
     1021 tttcccctgg cgctgcgtcc cggcatgcgc atctgtgcgg tgagttttga gcccttgagc
     1081 ggtcccacca gtaagccgta tcgtgtcaag caaggcgcca aatactgggg acaggatagc
     1141 ccgctgtcga gccggatcga taaggaacgg gagtaacagg acttccctca aacgttgcgc
     1201 agccacactg ccgccgccga agctcacctg catcaattgc cagagcagtt tatcggcctc
     1261 aacgagagcg ttcatggctt caatgtttgg tcgcacatag gctgtcgagc atggattcca
     1321 aggtgaggag tatgtgctgt tggatctgct cttcatgggc gatctccgct tccagcgccg
     1381 ctatttttgc ggccatccaa cgctcgtcct tcaactgcat ggcataacaa tagggaggca
     1441 ctgtgcgcaa ttcgcagagc cgctccatct gtttggcgat gagcgcgcgc agccgctcgc
     1501 attcctcctg cagcacagtc aggttgtcca ggataggctg aaccatatcc tcttgaccgg
     1561 ccttgatcgc ggtcaata
//
LOCUS       DASQSL010001331         1169 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_159874, whole genome shotgun sequence.
ACCESSION   DASQSL010001331 DASQSL010000000
VERSION     DASQSL010001331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1169
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159874"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1136)
                     /locus_tag="VE844_13665"
     CDS             complement(<1..1136)
                     /locus_tag="VE844_13665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010960308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HZC02351.1"
                     /translation="MNNLYTLFKTSIDRYAPRLAIQFRPRYRTLAWTYGELGAHVAHL
                     SRALKAKGIGPGDRVLLYAGNSPYWVAAYFGILARGAIVVPLNPQGMPDQLDRIVASA
                     EPKLLLISTRSPWPAKPVPWVRIEQAADNYLDEPLEMPGRDTDPRDLAEIVYTSGTTA
                     EPKGVMLTHGNLLANIEATAEITPLQPSNQVMSLVPLFHMYGQMTSLLYPLKQGSAVT
                     YIASPSSRVILDTLAHTPATHLVAVPEFLKTMMGRLQERLVSVPNFARPLLRSRIRAQ
                     ISKTLHTIACGGAPLDPEVERQWRALGFEVVQGYGLTETSPVIAGNTRTHHRLGSVGK
                     PLKGIEVKLSPDREILVKGPNVMKGYFRDERRTEQVFQEGWFKT"
BASE COUNT          259 a          317 c          350 g          243 t
ORIGIN      
        1 tccgtcttaa accatccttc ctgaaagacc tgctctgtac gtcgctcatc acgaaaatat
       61 cccttcatga cattggggcc cttgaccaaa atctccctgt cgggagaaag cttgacctcg
      121 atgcccttga gcggtttgcc caccgatccc aggcgatgat gagtgcgtgt attgccggct
      181 atgaccggac ttgtctctgt aagcccgtag ccttgcacta cctcaaagcc cagggcgcgc
      241 cattggcgtt caacttccgg gtcgaggggc gcaccaccac aggcaatggt atgcagggtc
      301 tttgaaatct gagcacgaat gcggctgcga agcagtgggc gagcaaagtt tggtacagaa
      361 accagccttt cttgcagccg gcccatcatg gtcttcaaaa attccggcac tgccacaaga
      421 tgcgtggccg gagtatgcgc caatgtatcg aggatcaccc gcgagcttgg cgaggctata
      481 taggtcacgg cgctcccctg cttgagagga tagagtaggc tggtcatctg tccatacatg
      541 tgaaaaagcg gcacgaggct catcacctga ttggagggtt gcaaaggggt gatctctgcc
      601 gtggcctcga tattggcaag caggtttcca tgcgtcagca taacgccctt gggctccgcc
      661 gtcgtgcccg aggtatagac gatctctgcc agatcacggg ggtcggtgtc ccgaccgggc
      721 atctccagag gctcgtcgag gtaattatct gcagcttgtt cgatcctgac ccagggaacg
      781 ggttttgccg gccagggaga gcgggtagag ataagcagca gcttgggctc ggcggaggcg
      841 acgatgcggt cgagttggtc cggcatgccc tgtggattaa gcggtacgac gatggccccg
      901 cgcgccaaga tgccaaaata ggcggcgacc caataagggg agtttccagc atacaagaga
      961 acgcgatcac ccggcccgat ccccttcgct ttcagtgccc gggagagatg tgccacgtgc
     1021 gccccaagct caccataggt ccaggccagg gtgcgatagc gaggacggaa ttgaatagca
     1081 agccttggag cgtagcggtc tatagaggtt ttgaacaagg tataaagatt attcatgtga
     1141 gtgtggcgat cactacggcc acggcataa
//
LOCUS       DASQSL010001332         1706 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_169915, whole genome shotgun sequence.
ACCESSION   DASQSL010001332 DASQSL010000000
VERSION     DASQSL010001332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169915"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..1149)
                     /locus_tag="VE844_13670"
     CDS             complement(106..1149)
                     /locus_tag="VE844_13670"
                     /inference="COORDINATES: protein motif:HMM:NF013543.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HZC02352.1"
                     /translation="MAAARRSYKRALLWATVTTFLGSAAALLLAQALLSTFTGKGLVP
                     DSIVTLKSFSLAVVAAAAATVMLATRIGIPISTTHALTGALMGAGWLASPEGVDLARL
                     GSNFFAPLLISPFLAIIACAVLYPCLRFTRRRLGIDKETCVCIGTQTLAVPSTPLSRS
                     PTMTLAGSQALPTLTVGTEASCQERYTGTLFGLSARTSLDALHFLSAGMVSFARGLND
                     TPKIGAMLLVGGTLSPFAALVGVAIVMAVGGLLNAKRVAETMSYRVTAMNPGQGFTAN
                     LVTSTIVILASKLGLPVSTTHVSCGALFGIGAVTQQAHWNIIAGILLAWITTLPVAAA
                     FGALSFLALNHWL"
     gene            complement(1260..1613)
                     /locus_tag="VE844_13675"
     CDS             complement(1260..1613)
                     /locus_tag="VE844_13675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013212176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02353.1"
                     /translation="MPEQITKYPEVTLKVLKESGARCGEGAKQKILTHCPREQFCALP
                     SGEICVYGIEQIPQMTQINTEELARIVCPPGKQASMAFSPFSGTDMALMGTVFVAGLL
                     VGIFWRNVGGRRKSS"
BASE COUNT          386 a          499 c          490 g          331 t
ORIGIN      
        1 aaagaccttc tttatgagaa ttgctaccgg gttggcgtgc ccgtggcctg aagcagttgg
       61 gctggtgaga ggtgatgatt cgaaactgcc tttgatctca gcgagtcaga gccaatggtt
      121 caacgcgagg aaacttaagg ccccaaacgc cgcagccacc ggtaaggtcg tgatccaggc
      181 caaaagaata cccgcaatga tgttccagtg agcttgctga gtcaccgcac caatcccaaa
      241 cagcgcgccg cacgagacat gggtggttga caccggtagc ccgagtttgg aagccaggat
      301 gacaatggtg gaggtgacca gattcgccgt gaatccttga cccggattca tcgcggttac
      361 ccgataggac atggtctccg ccacccgctt ggcgttcagt aggccgccca cagccatcac
      421 gatggcgaca cccacgagcg ctgcgaaagg gctcagggta ccgccgacga gcaacatcgc
      481 tccaatcttg ggggtgtcat ttaagcctcg cgcaaaactg accatcccgg cacttaagaa
      541 gtgcagggca tcgagagaag tgcgggcact caggccaaac agggtgccgg tgtagcgttc
      601 ctggcaactc gcctcagtcc caacggtgag ggtcgggagt gcctgggacc cggcgagcgt
      661 catcgtcgga ctcctggaaa gaggggtaga gggtaccgca agggtttgcg tgccaataca
      721 cacacaggtt tctttgtcga tgccaagcct ccttcttgtg aaccgaaggc acgggtacag
      781 caccgcacag gcaatgatcg ccaggaacgg gctgatgagg agaggggcga aaaagttact
      841 cccgagtctc gctaagtcca cgccctcagg cgaagccagc caaccggcac ccatcaatgc
      901 cccggttagt gcgtgagtcg tcgagatggg aatgccgata cgcgtcgcga gcatcaccgt
      961 tgctgcggcc gcagctacca cggccaggga aaaactcttc agtgtcacga tgctatcggg
     1021 gaccaggcct ttcccggtaa aggtgctcag cagcgcctgc gccaatagga gggccgctgc
     1081 agagccgagg aaggtcgtca ctgtagccca gagcagcgcg cgcttgtaac tccgtcgtgc
     1141 cgctgccata gagcgtcgcc actcccttga agttgtcgtt agcgccgttc gcataggcga
     1201 gaaatagtcc aaagaggatg gcaagtaccc aggtcatggg gcgtcctgta tggcgagtgt
     1261 caactgctct ttctgcgacc ccctacattg cgccagaata tcccaaccag gagaccggcc
     1321 acgaagaccg tccccatcaa agccatgtcg gtacctgaga acggggaaaa tgccatcgaa
     1381 gcctgcttgc ctgggggaca gacgatgcga gcgagttcct cggtattaat ttgcgtcatc
     1441 tgcgggatct gttcaatgcc atagacgcag atctcaccgc ttggaagggc gcagaactgt
     1501 tcgcgaggac agtgtgtcag aatcttttgc ttcgcccctt ccccacagcg cgctcccgat
     1561 tccttgagta ccttgagagt cacctccggg tacttggtaa tctgttctgg catggcaatg
     1621 cctccttatg catatcgtct atcacaacca cttaaaccga tccatcttcc actccgcacc
     1681 cttagcccaa ctttcgcaac tgaggc
//
LOCUS       DASQSL010001333         2212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_77822, whole genome shotgun sequence.
ACCESSION   DASQSL010001333 DASQSL010000000
VERSION     DASQSL010001333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2212
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77822"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(73..312)
                     /locus_tag="VE844_13680"
     CDS             complement(73..312)
                     /locus_tag="VE844_13680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02354.1"
                     /translation="MGPRIDLLINLAEAKECDLVARTRKTGYLYRDGRFVPASAGHRP
                     LLDAELRTKATKRYGEVTYTCVPPGSGQRMARGRN"
     gene            complement(353..1936)
                     /locus_tag="VE844_13685"
     CDS             complement(353..1936)
                     /locus_tag="VE844_13685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017841820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HZC02355.1"
                     /translation="MYLSDFDLQQLDEAKVSRLAPSQKEVLLWKVLADLKEARERLKA
                     NSQTSSRPPSSDPPWLGTEVKAEAESEEAVEVTAGKRAEGKRGAPVEAPETDASPGPR
                     SGADSVCATPLKRAGRSKGAPGHSRVVALAVSSTVIHRPEHCALCGQALAEQAFIAGG
                     GFYVLDIEMESGEGLGGLRLRHDKHLYGEVRCGCGHVNRSEPGRCANEPGWAIALSEW
                     QLVGPMLATLIVCLALRLHLSRRRIQEFLRDWLGVELSTSTITHCIHESGRAVGPIEE
                     RLVEELQQACLAHADETPWKEWGQLLWLWVITTPTLCLYWIGSRSKALLSQILGEEFL
                     GWLMSDGYHVYRQFKHRLRCWAHLLRKARGLKESLSAEARAFGEITHDLLSTLMRAIY
                     QARAGPPVKLQDPFAEHLAAFRAVCEQQRDSAHEKTRALAREFLNDWEAIWIVLEHPY
                     LPLTNNEAERALRHWVIARHISQGTRTAQGSRALALLASVIETCRKRNILPWPYLAHV
                     LAERRKGHPAPPLPAAPVS"
BASE COUNT          455 a          731 c          576 g          450 t
ORIGIN      
        1 aatgtctaat atcaccccct tacccaacca gttatgaggt tataggacgt cacaaacctg
       61 catggcttgt cgtcagttgc gaccgcgtgc catgcgctgg cccgagcccg gcggcacgca
      121 ggtatatgtg acctcaccat agcgtttcgt agccttagtg cgtagctcgg catcgagcaa
      181 cggtcgatgc ccagcacttg ccggcacaaa tcggccgtcg cggtagaggt acccggtctt
      241 gcgcgtgcgg gcgaccaggt cacactcctt ggcctccgcc aggttgatca agagatcgat
      301 gcgcggcccc acgacgtacc catttaggcc ccctgagtcc gagtcactca aatcacgaga
      361 caggggcagc aggcaatggc ggcgccggat ggcctttacg gcgttcggcc agcacgtgtg
      421 ccaggtaggg ccagggcaga atattacgct tgcgacaggt ctcaatcaca ctggccaaca
      481 aggccagcgc acgactgcct tgcgcagtac gcgtaccttg actgatatgt cgagcgatca
      541 cccaatgacg caaggccctt tcggcttcgt tattggtgag cgggaggtaa gggtgctcca
      601 gcactatcca aatcgcttcc cagtcattga gaaactcgcg cgccaaggcc cgggttttct
      661 catgggctga atcgcgttgc tgctcgcata ccgcccggaa cgcggctaga tgttccgcaa
      721 atgggtcttg gagctttacc ggcgggcctg cgcgtgcttg ataaatcgcc cgcatcagcg
      781 tgctcaataa atcgtgggta atctccccaa aggcacgagc ttccgcactc aggctctctt
      841 tgagtccgcg cgccttgcgt aacagatgcg cccagcaacg caggcggtgt ttgaactggc
      901 gataaacgtg atagccgtcg ctcatcagcc agcccagaaa ttcttcaccc aatatctggc
      961 ttagcaacgc cttgctgcgc gaacctatcc aatataagca gagcgttggg gtggtaatga
     1021 cccacagcca cagtaattgg ccccactctt tccagggcgt ctcatcggcg tgggccagac
     1081 aggcttgctg gagttcttcc accaaccgct cttcgatggg ccccaccgcc cgaccgcttt
     1141 catgaataca atgagtaatc gtgctggtgc tcagctccac ccccagccag tcacgcaaaa
     1201 actcctggat ccgccgccgg gaaagatgca gccgtagcgc caggcagacg atcagcgtgg
     1261 cgagcatggg ccccaccaac tgccattcac tgagcgctat cgcccacccc ggttcattcg
     1321 cacagcggcc cggttcgctg cggttgacat gcccgcagcc acagcgaacc tcgccgtaga
     1381 ggtgtttgtc atggcgtagc cgtaagcccc ccagcccctc gcctgactcc atctcaatat
     1441 ccagtacgta aaacccaccg ccggctataa aggcctgctc agctaaagcc tgcccgcaga
     1501 gcgcgcagtg ttccggccga tggattaccg tgctgctcac cgccagggcc accacgcggc
     1561 tgtgacccgg cgcacccttc gagcgacccg ctcgcttgag cggggttgcg cagacactgt
     1621 ccgcaccgct tcgggggcct gggctagcgt ccgtttccgg cgcttcgacc ggcgcacccc
     1681 tcttaccctc agcgcgtttg cctgccgtta cttccaccgc ctcctcggac tccgcctcag
     1741 ccttcacctc cgtacccaac cacggcggat cactactcgg gggccgagaa ctggtttgcg
     1801 agttcgcctt cagccgctcg cgcgcctctt tcagatccgc cagcactttc cacagcaaga
     1861 cctccttttg cgacggtgcc aatcgcgaca ccttcgcctc atccagttgc tgaaggtcaa
     1921 aatcactcag atacacaaac caaactcgct agcacgaagt taatctttgc aactcaatgt
     1981 actctatctt ggtaccgatc gccaattcag cagatggcgc tctgtagata ctagggggga
     2041 taaacggcta cgtgaaagag tgcttcctac cgaatactga atcaatcctg gattgcgttt
     2101 cactccatcc aggctacaac tacaactgct cccagacccc aaggttacac cggcactatg
     2161 tgcccaagga tgagctgcga gctcttcgta ccttgatact cattgacctc ag
//
LOCUS       DASQSL010001334         2936 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_188390, whole genome shotgun sequence.
ACCESSION   DASQSL010001334 DASQSL010000000
VERSION     DASQSL010001334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2936)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2936)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2936
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188390"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..502)
                     /locus_tag="VE844_13690"
     CDS             complement(<1..502)
                     /locus_tag="VE844_13690"
                     /inference="COORDINATES: protein motif:HMM:NF012506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate/2-methylcitrate synthase"
                     /protein_id="HZC02356.1"
                     /translation="MKRETVTITDNSTGRSVECPIYRGIYGPPVIGTQILYKELGMFT
                     LDPGFLTTASCRSAITYLDGDEGTLLHRGYPIDQLAEHSTFLEMCYLLIYGELPSQPQ
                     MDEFETAIKRHSMVHEHLIKFYGGYRYDAHPMAMMVGVMGAMASYYHDAMNIFDPEEQ
                     DMTARRI"
     gene            809..>2936
                     /locus_tag="VE844_13695"
     CDS             809..>2936
                     /locus_tag="VE844_13695"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009205721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HZC02357.1"
                     /translation="MSCLHSSNSWFLEGLYQTYLENPVSLDKQWQEFFSRLQQPEKPI
                     TVVTRQDPAKARNQQRGSSVEVHDAQKQVAVLQLINAYRFRGHRQADLDPLRQYERPE
                     VADLDPAFHGLFEEDMEATFNTGSLCGTTEAKLREILAILCTTYCRTIGAEYMHITDT
                     AQKRWIQQRLELNQAIPNFPPTKKRHILERLIAANSLEGYLHTKYVGQKRFSLEGGES
                     LIPLLDELIQQASAQGVKEVVIGMAHRGRLNVLINTVGKRPAELFTEFEGKGGNGVGS
                     GDVKYHLGFSSDLATPGGPIHVVLAFNPSHLEIIDPVVEGSVRARQDHRKDKTRNTVL
                     PVLIHGDAAFAGQGVVMETLNLSQTRGYTTGGTIHIIINNQIGFTTSDPLDARSTLYC
                     TDVAKMVQAPIFHVNGDDPEAVVFLAQLALDFRMEFHKDVVIDLVCYRRHGHSEADEP
                     SVTQPIMYQRIRQHPAVQKLYADKLVQEGVSAPTEPLEMARSYVQALERNQAVAGPVV
                     YDIKHEFRIDFSPFIGTHWREPAHTPLSLEKIAALTLRFTTLPEAFKLHRSVARIIDQ
                     RREMGRGQLPIDWGYAETLAYASLVDEGYPVRLSGQDSGRGTFAHRHAILYDQDTGDS
                     YIPLQYIKEDQPSFLVINSLLSEEAVLGFEYGYSSSEPNALIIWEAQFGDFANNAQVV
                     IDQFLTSSEAKWGRYCGLALFLPHGYD"
BASE COUNT          669 a          810 c          774 g          683 t
ORIGIN      
        1 tgatgcgccg ggcggtcata tcctgctcct cggggtcaaa gatattcatc gcgtcgtgat
       61 agtaggacgc catcgccccc atgaccccga ccatcatggc catcggatgg gcatcatagc
      121 gataaccgcc ataaaacttg atgaggtgct catgcaccat gctatgtcgc ttgatggccg
      181 tctcgaattc atccatctgc ggctggctcg gcaattcgcc gtagatcaag agataacaca
      241 tctctaagaa ggtgctgtgt tcggccagtt gatcgatcgg ataaccgcgg tggagcagtg
      301 tcccctcatc cccgtcgagg taggtgatgg cgctgcggca actggcggtc gtgaggaacc
      361 ccggatccag ggtaaacatc cccagttcct tgtaaaggat ctgggtacca atcacaggcg
      421 gaccgtagat gccacgatat atggggcatt cgacggatct tcctgtgcta ttatcggtaa
      481 tggtaactgt ctcgcgtttc atatccttct cccgtgcagc atcggccgtg taacctatcc
      541 accctcgcct ttatttgaat tataccttag catagcgtta ttttctgcat cgcagcaaga
      601 ggagtgggag attagcgcgg aatagctgct tttttaaatt attttagaga gtaagttcga
      661 tctcagcgga ttttctcaac taatttgata acattttatt gtatcttaca gaaaagtaag
      721 taataattga tattatgatt gaacctttgg ccgcacaagg cggtcattta taaatgacgc
      781 caggaaattt ggggaaatga taatggaaat gtcgtgtttg cacagtagca atagctggtt
      841 ccttgaaggt ttataccaaa catatctgga aaatcctgtc tccttggata agcaatggca
      901 ggagtttttc agtcgcttgc agcagcctga gaagccgatc accgtcgtca ctcggcagga
      961 cccggcaaaa gcccgcaacc aacagcgtgg gtcgtcggta gaagtacatg acgcccaaaa
     1021 gcaagtagcg gtcttgcaac tcatcaatgc ttaccgtttt cgtggtcacc gccaggccga
     1081 tctcgatccg ctccgccaat atgaacgccc cgaggtcgcc gacctggatc ctgccttcca
     1141 cggcctgttt gaagaggata tggaggcgac cttcaatacc ggttccctgt gcggcaccac
     1201 cgaggcgaag ctccgggaga tcctcgcgat cttgtgcacc acgtactgcc gcaccatcgg
     1261 tgctgaatac atgcatatca ccgatacggc ccaaaagcgc tggatccaac aacgcttaga
     1321 gctcaatcag gctatcccga actttccgcc caccaaaaaa cgccatatcc tggaacgcct
     1381 catcgccgcc aacagcttgg aaggctacct gcacaccaaa tatgtcggtc agaagcgctt
     1441 ctcgctcgaa ggcggcgaaa gcctgatccc actgcttgac gaattgatcc agcaggcaag
     1501 cgcacagggt gtcaaggagg tggtgatcgg catggctcac cgcggccggc tcaatgtatt
     1561 gatcaatacg gtcggcaaac gcccggctga gttattcacc gagttcgaag gcaagggcgg
     1621 caatggggtt ggatccggtg atgtcaagta tcacctgggc ttttcgtcgg atctcgccac
     1681 ccccggcggc cccatacacg tggttttggc ctttaaccct tcccatctcg agatcatcga
     1741 tccggtcgtg gagggatcgg tgcgcgcccg ccaggaccac cgtaaagata agacccgcaa
     1801 taccgtgctg ccggtcttga tccatgggga tgccgcattc gccggccaag gcgtggtcat
     1861 ggaaaccctc aacctgtcac aaacccgtgg ttatacgaca ggtggcacga tccatatcat
     1921 catcaacaac cagatcggat tcaccaccag tgatcccttg gatgcgcgct ccaccctcta
     1981 ttgcacggac gtagccaaga tggttcaagc gcccatcttt catgtgaatg gcgatgatcc
     2041 ggaggccgtg gttttcctgg cccagctcgc cttggacttt cgcatggagt tccacaagga
     2101 tgtagtcatc gatctggtct gctatcgcag gcatggccat agcgaagcgg atgaaccctc
     2161 ggtgacccaa cccattatgt atcaacgcat acggcagcat cccgcggtgc agaagctcta
     2221 tgctgataaa ctggtgcagg aaggcgtaag cgctcctacc gagcctctgg agatggcgcg
     2281 atcctacgtg caagccctgg agcgcaatca ggccgtcgct ggccccgtag tgtatgacat
     2341 caagcatgaa ttccgtatcg atttcagccc tttcatcggc acccactggc gtgaaccggc
     2401 tcatacccct ctctcccttg aaaagattgc agccttgacc ttgcgattca cgaccctgcc
     2461 tgaagcgttc aagttgcacc ggagtgtggc ccggatcatc gaccaacggc gtgagatggg
     2521 ccggggtcaa ttacctatag actggggcta tgccgaaacc ttggcctatg ccagcctcgt
     2581 cgatgaaggt tatccggtgc gcctgtcagg ccaggacagt gggcggggga catttgccca
     2641 ccggcatgcg atcctgtatg accaggacac cggggatagc tatattccct tacaatatat
     2701 caaggaggat caaccgagct ttttggtcat caattcgctg ctgtcggagg aagctgtgct
     2761 tggttttgag tatggttaca gcagctctga gcccaacgcc ctgatcattt gggaggcgca
     2821 gtttggtgat tttgccaata acgcacaggt ggtaatcgac caattcttga cctcttctga
     2881 ggccaaatgg ggtcgttact gtgggctggc cctgttcctg ccccatggtt atgatg
//
LOCUS       DASQSL010001335         2008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_159916, whole genome shotgun sequence.
ACCESSION   DASQSL010001335 DASQSL010000000
VERSION     DASQSL010001335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2008
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159916"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1555)
                     /locus_tag="VE844_13700"
     CDS             complement(<1..1555)
                     /locus_tag="VE844_13700"
                     /inference="COORDINATES: protein motif:HMM:NF033559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC02358.1"
                     /translation="MADQPTYRSQVLDHLGLVAGMFDELGLGDVIDQATQQNPEMRDL
                     TVGEAVKAMVLNGLGFINQALYLVPRFFQHKPTSRLIAPRVAPAQLNDDALGRALDTL
                     YAYGVTELYSLIAATAAKRLGLTPAIAHLDSTSFHVDGRYNSDEEPEDKVVHITKGYS
                     RDHRPDLNQVMLELIVEHQAGIPLLMQPLSGNSRDAQDFGEVIGTHVQQLQTTYGMHY
                     LVADSALYSAANLQKLAATAMKWISRVPATLSEAQALLAQIDLQTLIPLTEGYRYHEY
                     TSTYGGIAQRWVLISSESRQPQAQRTVDKQLRTASDKEVKAWKKLCGTTFACEADAQQ
                     ALTLFTQTLQATFLRASTVHAWPRYGKRGRPGQGAQPTQTVYQIEGALASSLTSRQAL
                     LDQHSCFILATNENDATQLSPQELLTSYKGQVHAERGFRFLKDPQFFASSFYLKKPER
                     IMALLMVMTVCLLVYAALEYRIRTALKEHDATFPNQKGNPVQNPTARWVFQYFVGIHV
                     LLIPGQWSPL"
BASE COUNT          438 a          519 c          614 g          437 t
ORIGIN      
        1 ccaggggaga ccactgccca gggatgagta gcacatgaat cccgacaaag tactggaaga
       61 cccatcgtgc cgtcgggttc tgcactggat tgcccttctg gttggggaac gtcgcgtcat
      121 gctccttcag ggcggtacgg attcggtatt ctaaggcagc atacaccaac aaacatactg
      181 tcatcaccat taagagcgcc atgattcgct cgggtttctt gagatagaac gaggaggcga
      241 aaaactgggg gtctttcaga aagcgaaagc cgcgttccgc atgcacctgg cctttgtagc
      301 tcgtcagaag ctcttgtggc gacagttgag tagcgtcgtt ttcgttggtg gccagaatga
      361 agcaactgtg ctggtcgagg agggcttgtc gggacgtgag cgacgaggcc aaagcccctt
      421 cgatctggta gaccgtctgc gtgggttgcg ccccttgtcc aggtcggccc cgtttgccat
      481 agcggggcca cgcgtgcacc gtgctggcgc gcagaaacgt ggcctgcaag gtttgcgtaa
      541 agagtgtcag cgcctgctgg gcatcggctt cgcacgcaaa ggtagtgccg cataatttct
      601 tccacgcttt gacctctttg tcacttgctg tgcgtaactg cttgtcgacg gtgcgctgtg
      661 cctgcggctg gcgggattcg gaggagatga ggacccagcg ttgcgcaatg ccaccgtagg
      721 tcgacgtata ctcgtgatag cggtagcctt ctgtgagtgg gatcagggtc tggaggtcga
      781 tctgggccag gagggcttgg gcttcgctta aggtcgccgg cacacggcta atccacttca
      841 tcgccgtcgc agcgagtttc tggaggttgg cggcactata gagggcacta tcagcgacca
      901 gatagtgcat gccataggtg gtttgcaact gctgcacatg ggtgccaatc acctcgccaa
      961 agtcttgagc atcacggctg ttgccgctga gcggttgcat cagaagaggg atgcccgctt
     1021 gatgctctac aatcagctct aacatgactt ggtttaagtc aggccgatga tcacgactat
     1081 agcccttggt gatgtgtacg accttgtcct cgggttcctc gtcgctgttg tagcgcccat
     1141 cgacgtggaa gctcgtgcta tcgagatggg caatggcagg cgtaaggccg agacgcttgg
     1201 cggcagtcgc cgcaatcaga ctatagagtt ctgtcacccc gtaggcatag agcgtatcca
     1261 aagcgcgacc gagcgcatca tcgttgagtt gtgcaggggc aacgcggggc gcaatgaggc
     1321 gagaggtggg tttatgctgg aagaaccgcg ggacgagata gagcgcttga ttgataaacc
     1381 ctaggccgtt gagcaccatc gctttgacag cctcgcccac ggtgaggtct cgcatttcag
     1441 ggttttgttg ggtggcttga tcgatgacgt cccccaggcc gagttcgtcg aacatgccag
     1501 cgacaaggcc gaggtggtcc aaaacttggc tacggtaagt gggttggtcg gccataataa
     1561 tctcctctga cggtgaggag attattatgg acctccatgg aaacgcaaaa ataactcaaa
     1621 tcgcacagag aggtgaggaa agtcggtcta aatcgaagct catgagattg gcacagcgaa
     1681 gttcccccat ggtacgaggg acattgccac atacccgtgt atcggggaga acccgctatg
     1741 ccaaggagta ctggactcaa cctgtctgcg gaggggcctt tactatgagc cggcggtcac
     1801 cgcggcagtc gagaaaatcg ccgccgagga acaagcaagg gtcccataac cagcccggtg
     1861 catggcaact cgggctagcc agctctagca ctaccagaga gaaaccaacc ttctagtaga
     1921 gactacggct gggggaacat atcataggtc cacttcttgt aatgtgtaca tgccttatcc
     1981 acaagcggta tcagccttcg ctacatcg
//
LOCUS       DASQSL010001336         2999 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_188400, whole genome shotgun sequence.
ACCESSION   DASQSL010001336 DASQSL010000000
VERSION     DASQSL010001336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2999)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2999)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2999
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188400"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            685..1272
                     /locus_tag="VE844_13705"
     CDS             685..1272
                     /locus_tag="VE844_13705"
                     /inference="COORDINATES: protein motif:HMM:NF016291.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HZC02359.1"
                     /translation="MFDAKRLLFNLLRNSMAGSRPHRVRRGFGGSSLGSMGMGMLGSL
                     AMTALQRYRQGQGSSASDTATTPPPEPTAASDDEAANMLIQAMVSAAKADGEVDPQER
                     QRILAELTEAGADEEERAFIQRELEKPLDLNALASRVHTPQMAEEVYTASLLAIEVNT
                     PAEQRYLAYLAARLNLDKETVTQLHERFDAPQPHY"
     gene            complement(1534..2463)
                     /locus_tag="VE844_13710"
     CDS             complement(1534..2463)
                     /locus_tag="VE844_13710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02360.1"
                     /translation="MEERLALAAPAPPLPPEVVEQVGIGGDLSELNAAQRAEYYAAVC
                     RSLGLNPLTKPFAYLTLNGQLRLYALRDCAEQLRRLHGISISITNRERMHDIYVVTAR
                     AKDRQGREDESTGAVPLGNLRGEALANALMRAETKAKRRVTLSIMGLGWLDETELDTM
                     PHGPHAVMPSEEPLSSEEPPTEVHPTAEQINSLVEMATSCGVDLTSFGNHMRRLMQLA
                     AETTITKKFLRESMTMAQYEVAWQHYHAGLTQRVEAEVSDAPAAGAGVSPGASEDLAG
                     PAEVGQLTDASEEKGRHAGSPTRLSRYPVSIGE"
     gene            complement(2508..2819)
                     /locus_tag="VE844_13715"
     CDS             complement(2508..2819)
                     /locus_tag="VE844_13715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02361.1"
                     /translation="MPAFRNGALLAINGEQERTQVRDDRDTQAALNEARHACAWKALR
                     PSDVLATVDDLVAQMLEARHHPVYELVAHGPRYGGAKRPYRSEMVGASYDPRIEAAIT
                     R"
BASE COUNT          633 a          880 c          828 g          658 t
ORIGIN      
        1 atgcgcaggc acagcagccc ccggcagggg gaggtcaagg gagaggggga accaagtccg
       61 caccctccac aaagccatta actctatgtt tcaagcggct ctccaactct tgacacgaag
      121 accgaaactc ccttgactaa atccctccac tgccagcttt cccggtcata ccagccgtca
      181 ccacagtttg gtgtttttgc ccgaaaactt cttgcggagg taatcgtacc gttcgataca
      241 gtttgcctca accgcaaccc tgtagacatg ctattgcaca caggtgctgc gacaaccccc
      301 atatgcaggc cagaatgatg ctgacacgaa cagaatcagt agtagtgttc aatcgcttga
      361 gaaaataggc acttatggct taccgtatat tttctcaaca aattgcccgc taccctattc
      421 tcaaggggtg cttccaaggt gctgggcttt aatctttatg cacgggtcag tagtaccgcc
      481 aatgtacgtg gcatagaatt tgcccctcta ctatatgagg ggaagcaaca ggctgaatgg
      541 ccccacggtc atggatgccc atttcttgta tgctcttccg gcgttttcgt ctcacaatga
      601 gaatccctat tctcattgtg aggaagtccc tgtagtgttg tgtgacacac atgaaacctg
      661 tagaagtagt aaggaggata ttttatgttc gatgctaaac ggttgctatt caatctgctg
      721 cgcaattcta tggcaggctc acggccgcat agagtacgtc gtggctttgg cggatcgagt
      781 ttaggcagta tggggatggg aatgcttggc agccttgcca tgaccgctct acaaaggtat
      841 agacaggggc agggctcttc tgcgagcgat accgcaacca ccccgccgcc agaacccaca
      901 gcagcaagtg acgatgaggc tgcaaatatg ctgattcaag ctatggtctc agccgcaaaa
      961 gcggacggcg aggtcgaccc tcaggagcgg cagcggatcc ttgccgaatt gaccgaagcc
     1021 ggtgccgatg aagaagagcg ggcgtttatc caacgtgagc tggaaaaacc tctagacctg
     1081 aatgccttgg ctagccgtgt gcatacccct cagatggcgg aggaagtcta cactgcttca
     1141 ctgctcgcga tcgaggtgaa tacgcctgcg gaacagcggt acctcgcgta tcttgcagcg
     1201 cgattgaacc tggacaagga gacagtgacg caactccatg aacgctttga cgcaccacaa
     1261 ccgcattact gacccgagcg atgaaacctc aagtgccgtt gcatacaggt gctgcgacaa
     1321 cccccatatg cagggaacgt gaccctctca gcaagccagt aaagtaagtg cgtgatttta
     1381 ttgtatattt actcagatat atccccatgg gcgggccaaa aacgtggacg tgcgatccac
     1441 gcgcggtgtg agggccgcgg tggcgagtca agggcgccta ccctgtaaaa gggaattatc
     1501 aaaggggatt atcacatgcg taaagcggtt cgttcattca ccgattgata ccgggtaacg
     1561 gctcagcctt gttggtgaac cggcgtgtct tcctttttct tcagatgcgt ccgtcagttg
     1621 gcctacctct gcgggacccg cgaggtcctc ggatgcgccc ggggagacac cagcgcctgc
     1681 ggcaggagca tccgagacct ctgcctccac ccgttgtgtc agccccgcgt ggtagtgctg
     1741 ccaagccacc tcgtactgcg ccatcgtcat cgactcgcgc aggaactttt tggtaatcgt
     1801 ggtctccgca gcgagctgca tcagccgtcg catatgattc ccgaagctcg tgagatcgac
     1861 gccgcaggat gttgccatct cgaccagcga gttaatctgc tcggccgtcg gatgaacctc
     1921 cgtcggtggc tcctcagacg acagcggctc ctcggagggc atgaccgcat ggggaccgtg
     1981 gggcatggtg tctagttccg tctcatccaa ccaccccagc cccatgatgg agagcgtcac
     2041 gcgccgcttg gccttggtct ccgctctcat cagcgcgttg gccaacgcct cccctctgag
     2101 gttgccgagc ggcacggccc cagtactttc atcttcgcgc ccctgacgat ctttggcccg
     2161 ggccgtgacg acgtagatat cgtgcatccg ctctcggttg gtgatggaga tgctaatgcc
     2221 gtgcagccgg cgcaattgct ccgcgcagtc gcgcaaggca tacagcctga gctgaccatt
     2281 cagggtgagg tacgcgaagg gcttggtgag cggattcagc ccgaggctgc gacagacggc
     2341 cgcatagtat tccgctcgtt gggcggcatt gagctccgag agatcgccgc cgatgcccac
     2401 ttgttccacc acctctggcg gcagcggtgg tgccggcgcg gctaaggcca ggcgctcctc
     2461 catggtacat cctcccccat gctgacatcc gctcactttt ccccgactca ccgggtgatc
     2521 gctgcctcga tgcgtgggtc atacgacgcc cccaccatct cgctcctata cgggcgcttc
     2581 gcgccgccat atcgcgggcc gtgggccacg agctcgtaga caggatgatg gcgtgcctcc
     2641 agcatctgag cgaccagatc atccacggtg gccaggacat cgctcggacg gagcgccttc
     2701 cacgcacatg cgtggcgcgc ctcgttgagc gcagcctgag tatcgcggtc gtcacgcacc
     2761 tgcgtccgtt cttgttctcc gttaatcgca agcagggcgc cattccggaa agcgggcaca
     2821 cgattctatt aacgtcgtcg ctatttttgt atgttgcacg gcggtcgata gtggtgaaat
     2881 tgacgtaaac ccaatgagta caaagctatg tcatgatctc ttatctgctc atagttccga
     2941 ttggctataa ctacccacta tagccagtgt cccgacgcgg agaaggctct tgcgtttcc
//
LOCUS       DASQSL010001337         1131 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_197556, whole genome shotgun sequence.
ACCESSION   DASQSL010001337 DASQSL010000000
VERSION     DASQSL010001337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1131
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197556"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            117..1013
                     /gene="hflC"
                     /locus_tag="VE844_13720"
     CDS             117..1013
                     /gene="hflC"
                     /locus_tag="VE844_13720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013442465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HZC02362.1"
                     /translation="MPYPKIAIPLLLILILGWLSVFTVDQREHALLRRLGSIQRAEFT
                     PGIHFKIPLIERVFKFDRRLLDLEAEPARFLTSEKKDVIVDSFVKWRIADVADYYRAT
                     GGDERRARMLLLQWINDSLRGEFGKRTVREVVADARGDVMKIVTRAAKEQGKHLGVTV
                     IDVRTKRIELPQEVSTAVYDRMRAERSRVSRELRSRGAEAAERIRAAADRERTVVLAE
                     AYGEAERVRGEGDAKAAEVYAQAYGKNSEFYAFYRSLNVYKSSFGTHNDILLLEPDSE
                     FFHYFESPRLESPRASTSASGR"
BASE COUNT          238 a          298 c          351 g          244 t
ORIGIN      
        1 ggttcctctc actactacct tacccagtcc gcccgaagcc gcgccggaga cagcctctag
       61 ctctgagcgg gaaatgcgcg accggactcg aaccagaatt cgtgggactc gctaacatgc
      121 catatcctaa gatagctata ccccttttgt tgatccttat cctcggttgg ctctccgtgt
      181 tcacggtcga ccagcgcgaa catgccctcc tgcgtagact tgggagcatc cagcgggcgg
      241 aatttacccc ggggatccac tttaagatcc cgctgatcga gcgggtcttc aaattcgata
      301 gacgcctttt agacctggaa gccgaaccgg cgcgttttct caccagcgag aaaaaagacg
      361 tgatcgtgga ttccttcgta aaatggcgga tcgctgatgt agcggactat taccgggcca
      421 cgggcggcga tgaacggcgg gcgaggatgc tgttgctgca gtggatcaac gacagcctgc
      481 gcggtgagtt tggtaagcgc acggtgcggg aggtggtggc tgatgcacgc ggtgatgtga
      541 tgaagatcgt gacgagagca gctaaagagc agggaaagca tttgggcgtg acggtgatcg
      601 atgtccgcac caaacggatc gaattgcccc aggaggtaag cacggcagtg tatgaccgga
      661 tgcgagcgga acgttcacgg gtgtcccgtg agctgcgatc gcgcggcgcg gaagcggccg
      721 agcggatacg tgcggcggcc gaccgcgaac ggaccgtggt gctggcggag gcctacggtg
      781 aggcagagag ggtccggggt gaaggcgatg ccaaggccgc cgaggtctat gcgcaagcct
      841 atggcaagaa ttccgagttc tatgcgtttt accgcagcct caatgtctac aaaagcagct
      901 ttggaacgca taacgacatc ttgttgctcg agcctgattc agagtttttc cattattttg
      961 agagcccccg tcttgagagt ccccgtgcca gtaccagtgc cagtggtcga tgatattctg
     1021 tcccttcatt cctccccctg gtagggggag gcaaggggtg tctctcttca ccctagtcca
     1081 tagttcctta gccggatctt cagaggatgg atatatggta tgaactgctt g
//
LOCUS       DASQSL010001338         1154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_188440, whole genome shotgun sequence.
ACCESSION   DASQSL010001338 DASQSL010000000
VERSION     DASQSL010001338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188440"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            93..1040
                     /locus_tag="VE844_13725"
     CDS             93..1040
                     /locus_tag="VE844_13725"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HZC02363.1"
                     /translation="MHRLEITEEEVGAILPLVNEVASRHGSVEKGDFLDSASTYAQEL
                     PRRLRAFLNAFRLTEPSGVCVISGYPVDDSKIGKTPAHWGREPSDSSTVEEEVFLNLC
                     GALLGDAIAWSHQRDGLICQDLVPIEDHKNEMLGSGSEQDLVWHTEDARYSYRGDYIG
                     LMCLRNPDAVPTTFASIDEVRLDPEQVEVLFEPRFIFRPDPSHPTDSEREKASVLFGD
                     PSSPYVRFDPYSMDRPETEEARSAMDYLIRAIDDNLTGVALLPGECLFIDNYRAVHGR
                     SSFKARFDGTDRWLKRINIARDLRKSRGVRKAPASRLIL"
BASE COUNT          263 a          318 c          345 g          228 t
ORIGIN      
        1 tccggagagg ggcagcgcta gccacaagct agctcttaga cagcggagaa tcgaatccga
       61 ctcattccgt tagaagaaaa aaggagcgca ccgtgcatag gcttgagata accgaggaag
      121 aagtaggagc aatcctgccg ctcgtcaacg aggttgcttc tcgacacggt tcggtggaaa
      181 agggcgattt cctcgacagc gcaagcacgt atgctcaaga gcttcccagg cgactacgcg
      241 catttctcaa cgctttcaga ctgacagagc cgtcgggagt ttgcgtgatc tcaggctatc
      301 ccgtggacga ctccaagata ggtaagacgc cagcccactg gggaagggag cctagtgact
      361 cctctaccgt ggaagaggag gtctttctca acctgtgcgg ggcgctcctg ggcgacgcca
      421 tcgcttggtc ccaccagcga gacgggctca tctgccaaga cctcgtgccc atcgaagacc
      481 acaagaacga gatgctcggt tccggtagcg agcaagatct cgtttggcac accgaagacg
      541 cacgctactc ctaccgaggc gactacatcg gcctgatgtg cctgcgaaac ccagacgccg
      601 tgcctaccac cttcgcctcg atcgatgagg tacggctgga cccggagcag gtagaagtcc
      661 tgttcgagcc acgctttatc ttccgcccgg acccctcaca cccgacagac agcgagcggg
      721 agaaggcgtc tgtgttgttc ggagatccca gctctccgta cgtgcgcttc gatccgtact
      781 ctatggaccg accggagacc gaagaggcgc gatcagctat ggactacctg atccgagcga
      841 tagacgataa cttaacgggc gtcgccttgc tgcccggaga gtgtctgttt atcgacaatt
      901 acagggccgt tcacgggaga agctctttca aggctaggtt cgatgggacg gatcggtggc
      961 tcaagcggat aaacatagcg agggatctaa ggaaatcgcg tggcgtccgc aaggcgcccg
     1021 catcccggtt gattctataa gcgggagttt ggcaataaag catttgccta catctcacag
     1081 tggtggtgtt agagcacctg tcatagtggt tgggctgtgg tgcggtagcg gcagtgctga
     1141 aagctacgtt gtag
//
LOCUS       DASQSL010001339         2656 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_169951, whole genome shotgun sequence.
ACCESSION   DASQSL010001339 DASQSL010000000
VERSION     DASQSL010001339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2656
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169951"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(42..527)
                     /locus_tag="VE844_13730"
     CDS             complement(42..527)
                     /locus_tag="VE844_13730"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018953034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HZC02364.1"
                     /translation="MSEVNVGSPVPDFSVPATGGRVLRLSDFKHTNFLVLYFYPKDST
                     PGCTREGQDFRDQIAAFQRLNTVIVGVSRDSLRSHERFKTAQCFPFELLADEDRILCR
                     QYGVLKEKSMYGKKVLGIERSTFLIDGRGMLRREWRNVKVEGHVQEVLKAVQELLKLS
                     P"
     gene            complement(551..1078)
                     /locus_tag="VE844_13735"
     CDS             complement(551..1078)
                     /locus_tag="VE844_13735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007194445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein R"
                     /protein_id="HZC02365.1"
                     /translation="MQNYLVISAVGTNRPGLVQSFSKAIKDYGCNIVDSRMTVMGGEF
                     AMILLLSGTWDAIAKIENMLPRLEENLNLTVISKRTEARKKVANFIPYAVEVVSIDHP
                     GIVHDIAQFFSSRNVNIEDMYTGNYAAAHTGAPMCSLHMTISVPTHMSIATLRGEFMD
                     FCDQLNLDAIMEPVK"
     gene            complement(1210..2097)
                     /locus_tag="VE844_13740"
     CDS             complement(1210..2097)
                     /locus_tag="VE844_13740"
                     /inference="COORDINATES: protein motif:HMM:NF040570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02366.1"
                     /translation="MAYTNLVINIPAELRDVLRFLEVRLVYDKKARRYDWHLVVENGK
                     QPKDPSGNNVVSVDLGEVHPAVVGDEQEATIVTCRARRHAAQGHRERLAHLTRAISQK
                     VSGSRRHKRLARAKTRLKAKHDRVMRDIEHKVSRAVVEVALERKADTLAIGDVRDAAD
                     KVDLGKRANQKVSGWDHGKVSQYIEYKAQAEGMKTERVEERYSSQTCPNYHHRHKPKG
                     RIYRCPPCRFQSHRDVVGQINILSRYKHGEVGKIAAPPIIKHRIPHNLRVMRRRRDTG
                     LLLSRSSSSWPPSLRSCAA"
     gene            2259..>2656
                     /locus_tag="VE844_13745"
     CDS             2259..>2656
                     /locus_tag="VE844_13745"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC02367.1"
                     /translation="MNNEEWLQDGRKIPDEVMGYIRKIAVEAVRERGQSPEVVAQSFN
                     FNRSCIYRWLNRYDAGGYEALESQPAPGAEPVVTDAMEVWLKQTVLTHTPVDFGYDTI
                     LWTRDLLAEVLKETFGVAVSGSTVSLHLRKL"
BASE COUNT          610 a          693 c          741 g          612 t
ORIGIN      
        1 cgagcacgaa caggcgcggc agggaagcag tacgcatgcc gctacgggga aagcttcagg
       61 agttcctgga cagctttcaa gacctcctgg acatgaccct cgaccttgac attgcgccat
      121 tcccggcgaa gcatgccgcg gccgtcgatc aagaaggtgc tgcgctcaat acctaagacc
      181 ttcttgccgt acatactctt ttccttgagc acgccatact ggcggcagag gatcctatcc
      241 tcgtcggcaa ggagctcgaa aggaaagcac tgcgctgtct tgaaccgctc atgggatctc
      301 aggctgtccc gtgatacccc cacgatcacc gtgttcagtc gttgaaacgc ggcgatctga
      361 tcccggaaat cctggccttc ccgggtgcag ccgggcgtgc tgtctttggg atagaaatac
      421 agcacgagga aattggtatg cttgaaatcg gaaaggcgta agactctccc gccggtggcg
      481 gggaccgaga agtcaggaac cgggctccct acattcacct cgctcataat gatcccctat
      541 ccgtttaaga ttatttcacg ggctccatga tggcatcgag gttcaactgg tcacagaaat
      601 ccataaactc gccccgtaga gtggcgatgg acatgtgggt cggcacgctg atggtcatgt
      661 gcagagaaca catgggtgcg cctgtgtggg ctgccgcata gttgccggta tacatatcct
      721 cgatattgac gttacggctg gagaagaact gagcgatatc gtgcacgatc ccgggatggt
      781 cgatagatac gacctccacg gcgtaaggga taaaattagc gacctttttg cgcgcctcgg
      841 tgcgtttgga gataacggta agattgaggt tttcctcgag cctcgggagc atattctcga
      901 tcttggcgat ggcgtcccag gtgcctgata gcaacaagat catggcaaat tcacccccca
      961 tcaccgtcat acggctgtca acgatattgc agccataatc tttgatcgcc ttcgaaaaag
     1021 attgaaccaa gccaggcctg ttagtgccca ccgcggagat aacgagatag ttttgcatgc
     1081 agcaggtgta aggttaatta ttaagattaa cagaataaaa ttaagtatac ctgagattaa
     1141 aatagaatag acctctcttt taggaggaga aggagcggct tactcttctt gtgacactct
     1201 gctgcggctt caagccgcgc agcttctcag gcttggaggc catgagctac tactcctcga
     1261 taggagtagg ccggtgtccc ggcgtctacg cataacccgc aagttgtgcg ggatacgatg
     1321 cttaatgatc ggcggagcag cgattttgcc tacctcgccg tgcttgtagc gcgaaagaat
     1381 attgatctgc cctactacat cacggtgcga ctgaaaccgg caaggcggac aacgataaat
     1441 gcgtcccttg ggtttgtgtc ggtgatggta attagggcag gtttgcgaac tgtagcgctc
     1501 ctctacccgt tcggtcttca tgccttcggc ttgtgccttg tattcgatgt attggctgac
     1561 cttcccgtga tcccagccgc ttaccttttg gttggcgcgc ttcccaagat ccaccttatc
     1621 agccgcatcc cgcacatcac caatagcgag ggtatccgcc ttgcgctcaa gcgctacctc
     1681 cactaccgcc cggctgacct tgtgctcgat gtctcgcata acccgatcat gcttggcctt
     1741 aagccgcgtc ttggcacgcg ccaaacgctt atgacgacgg gatccgctca ccttttggct
     1801 gatcgctcgg gtaaggtgtg caagcctttc ccgatggccc tgcgctgcat gccttcgggc
     1861 tctgcaggtg acgatagtcg cttcctgctc atcacccact accgccgggt gaacctcgcc
     1921 aagatccaca gagacaacgt tattgcctga cggatctttc ggctgtttgc cattctcaac
     1981 aaccaagtgc caatcgtagc gccgagcttt cttatcgtag accaggcgca cctccaggaa
     2041 gcgcaaaacg tcccgcagct cagcgggaat attgataact aaattggtgt aagccactgg
     2101 ctctgccggt gcgatgcgaa aaggctctac cgttccaggg tgttaaatgt aagtagattt
     2161 tcctctgaac ccgccaaggt caagaggaga atcgaaaatg agagaaaggt aaggggctgc
     2221 atccgaatca ggaagaaact cgaaaggtga ggtcaggcat gaacaacgaa gagtggttgc
     2281 aagatggtag aaagataccg gatgaggtga tgggttatat tcgcaagata gccgtagagg
     2341 ctgttcggga gcgtggtcaa agcccggagg tggttgccca gagctttaac tttaatcgta
     2401 gctgtattta tcgctggttg aatcgatacg atgcgggtgg atacgaagcc ctggagagcc
     2461 agccagcacc gggtgctgag cccgtggtca cggacgcaat ggaggtgtgg ctcaaacaga
     2521 ccgtgctgac tcacactccc gtagactttg ggtacgatac catcctgtgg acgcgtgacc
     2581 ttttggcaga ggtgttgaag gagacgtttg gtgtggcggt gagtgggagt accgtgagtc
     2641 tgcatctgcg gaagct
//
LOCUS       DASQSL010001340         2617 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_24287, whole genome shotgun sequence.
ACCESSION   DASQSL010001340 DASQSL010000000
VERSION     DASQSL010001340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2617
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24287"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            164..448
                     /gene="merP"
                     /locus_tag="VE844_13750"
     CDS             164..448
                     /gene="merP"
                     /locus_tag="VE844_13750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012480190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045340 - mercury ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mercury resistance system periplasmic binding
                     protein MerP"
                     /protein_id="HZC02368.1"
                     /translation="MRKSLASWVTLLTALMAGPAAAAEKTVTLNVDNMTCPTCAPVVK
                     KSLARVEGVAKVKVSLETNTATVTFDDAKTDVAALINATTNAGYPSHLAK"
     gene            470..883
                     /locus_tag="VE844_13755"
     CDS             470..883
                     /locus_tag="VE844_13755"
                     /EC_number="1.20.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012547737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030612 - arsenate reductase (thioredoxin)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase ArsC"
                     /protein_id="HZC02369.1"
                     /translation="MADPKHVLILCTGNSARSQMAEGLLRQQGGNQFEVFSAGTEPSR
                     VNPLAVEAMREIGIDISNHRSKSVDEFIGQEFDYVITVCDKAKESCPIFPGKAQRIHW
                     SIDDPAAAEGDEAIRLAIFRRLRDEIRERLRSFLQ"
     gene            complement(892..>2617)
                     /locus_tag="VE844_13760"
     CDS             complement(892..>2617)
                     /locus_tag="VE844_13760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CusA/CzcA family heavy metal efflux RND
                     transporter"
                     /protein_id="HZC02370.1"
                     /translation="SLTFVPAMVVVAFTGKVQEQENIIIRLAKAAYTPLVQVALHFRY
                     VVVLVAVVIFAGSLWLFSRLGQEFVPTLDEKDVATEGSRIPSTSLTQSLQMQSVVEKT
                     IARFPEVALVFSKTGTAEMATDPMPAHSSDTFVILKPRKQWPDRSESKAALIERLEAA
                     LRRLPGNSYEFTQPIQLRFNELISGIRSDVAVKVFGDEFEPLQATAQGVAHILRDIPG
                     AADIKVEQTAGLPVMNIDIDRAAIARYGLNIADVQDVVAIAVGGREAGLVFEGDRRFD
                     LVVRLPDTLRRDLSVLRQLPVPLPHRRGGVIDTALTGPEFIPPAFIPLSEVARIELTV
                     GLNQISRENGKRRVVVQANVRGRDIGSFVAEAQQRIDAEVNLPAGYWLTWGGQFENLV
                     EAKARLGLVVPVCFLIIFLLLFSALNSMKQAVLIFSGVPFAIIGGIVALWLRGMPFSI
                     TAAVGFIALSGVAVLNGLVMVSFINQLRQEGVALEEAIFRGALTRLRPVLMTALVASL
                     GFVPMAIATGTGAEVQKPLATVVIGGLISSTLLTLVVLPALYRLFERRTPEGRTNAPL
                     EGVRGIAR"
BASE COUNT          584 a          813 c          749 g          471 t
ORIGIN      
        1 aatcgtcatg gccaccagta acccattgga gagcacctta cgctcacctc ggaccgcatc
       61 gccaaagcaa gtttatggac cgcgactgtg atcatcgccg ttgcgctcgc gttcccctac
      121 atggcaccgc tttttatcga aacgtaatac cggaggacac tctatgcgaa agtcacttgc
      181 gagttgggtc acgctcctca ccgctctcat ggccggcccc gcggccgccg ccgagaaaac
      241 agtaacgctg aacgtggaca atatgacctg ccctacctgt gccccggtgg tgaagaaaag
      301 cctcgcgcgc gtcgagggag tcgccaaggt caaggtctcg cttgagacga acaccgccac
      361 cgtgaccttc gatgatgcca agactgatgt ggcggccctc atcaacgcca ctacgaacgc
      421 gggctatccg tcacacttgg ctaagtagca ggagagcgag aaaatagtaa tggctgaccc
      481 aaaacatgtc ctcattcttt gtacaggtaa ttcggctcgt agccagatgg cggaggggct
      541 tcttcgccag caaggtggaa accaatttga ggtatttagc gcgggcacgg agccgagccg
      601 cgtcaacccg cttgccgtag aagcgatgcg cgagatcggt atcgatatct ccaaccaccg
      661 gtccaagtcg gtggatgagt tcataggaca agaattcgac tacgtgatca cggtctgtga
      721 caaggcaaag gaaagctgtc ctatctttcc tgggaaggcc cagcgcattc attggagcat
      781 cgatgaccca gcggctgccg aaggagatga agcaatacga ctcgccatat ttcggcgcct
      841 gcgcgacgaa atccgcgagc gcttgcggag ttttcttcaa tagccagagc attagcgggc
      901 aattccacgc accccctcca acggcgcatt cgtccgacct tcgggcgtcc gacgttcgaa
      961 caagcggtac agtgccggca agaccacgag cgtcaaaagc gtgctcgaga tgagcccccc
     1021 aatgaccacg gtcgccagcg gtttctggac ctcggcaccc gtgcccgtcg caatggccat
     1081 cgggacgaag cccagggagg ccaccagcgc ggtcatcaat accggccgca agcgtgtcag
     1141 cgcacctcgg aagatggcct cctcgagcgc tacgccttct tggcgcaact ggttgatgaa
     1201 gctcaccatg acgagaccgt tcagaacggc cacccccgac aaagcgatga acccaaccgc
     1261 cgccgtgatc gagaacggca tcccgcgcaa ccaaagcgca acgatgccgc cgatgatggc
     1321 gaacggtacg ccgctgaaga taagcacggc ctgcttcatc gaattgaggg cgctgaagag
     1381 caaaaggaag atgatgagaa aacagaccgg cacgaccagg cccaagcgcg ccttggcctc
     1441 gaccaggttc tcgaactgcc cgccccatgt gagccagtaa cccgccggca ggttcacttc
     1501 tgcgtcgatg cgctgctgcg cctcggccac aaacgaccca atatcgcggc cgcgcacgtt
     1561 cgcctggacc acgacccggc gcttgccgtt ctcgcggctg atctgattga gccctacagt
     1621 gagctcgatc cgggcgacct cgctaagtgg gatgaacgcg ggggggatga actcggggcc
     1681 cgtgagcgcc gtatcgataa cgccccccct tcgatggggt aaaggaaccg ggagctgccg
     1741 cagcaccgaa aggtcgcggc gcagcgtatc aggcaggcgt acgaccaggt cgaagcgccg
     1801 atcgccctcg aagacgagac ccgcctcgcg gcccccgact gcaatcgcca cgacgtcctg
     1861 cacatcggcg atattcaacc catatcgggc gattgcggca cggtcgatgt cgatgttcat
     1921 gaccggcagc cccgcggtct gctctacctt gatatccgcc gcgccgggga tgtcgcgcag
     1981 gatgtgagca accccctggg ctgtcgcctg cagcggttcg aactcatcac cgaagacctt
     2041 gaccgcgaca tcgctgcgga tcccggagat gagctcgttg aagcgcagct ggatcggctg
     2101 cgtaaactcg taactgttac cgggcaatcg acgcagagcc gcctctagcc gttcgataag
     2161 tgccgccttg ctctcgctgc gatctggcca ttgcttccgt ggcttcagga tcacaaacgt
     2221 gtcagaggaa tgcgctggca tggggtcggt ggccatttcc gccgtacctg ttttagagaa
     2281 caccagcgct acttcaggaa accgggcaat cgttttttct acgacagact gcatctgcag
     2341 cgattgcgtc aggctggtac tcgggatacg tgagccttcg gtagcgacgt ccttttcatc
     2401 cagggtgggc acgaattcct ggcccagtct ggagaatagc cacaacgacc cggcgaagat
     2461 gacaaccgcg accaacacca cgacataccg gaaatggagc gctacctgta ccaacggcgt
     2521 gtaagcagct ttggctaagc gaataataat gttttcctgc tcctgcacct tgccggtaaa
     2581 tgctaccacc accatggccg gaacgaaggt gagggat
//
LOCUS       DASQSL010001341         3424 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_159948, whole genome shotgun sequence.
ACCESSION   DASQSL010001341 DASQSL010000000
VERSION     DASQSL010001341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3424)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3424)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3424
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159948"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..607)
                     /locus_tag="VE844_13765"
     CDS             complement(<1..607)
                     /locus_tag="VE844_13765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013260939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HZC02371.1"
                     /translation="MSSRSRSLRWLKEHSSDPYVKLARQGGFRSRAAFKLIEINAREQ
                     ILKPGMTVIDLGAAPGGWSQVAAAAIGPQGRLIAVDVLPMIPLKQVIFIQGDVCEEAV
                     VRSLLDILNNKMADLVLSDMAPNISGTKVRDQAQIMHLAERVVECAIQVLRPGGSLLV
                     KVFQGEEIDAYLKQLSRLFQKVYTRKPRASRGRSAEIYVIAH"
     gene            complement(644..1120)
                     /gene="greA"
                     /locus_tag="VE844_13770"
     CDS             complement(644..1120)
                     /gene="greA"
                     /locus_tag="VE844_13770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011814560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HZC02372.1"
                     /translation="MSKSPMTTLGAQRLREELQRLKTHDRPRIIQAIAEARSHGDLSE
                     NAEYHAAREQQGFIEGRIAEIEGKLSNAQIIDVSIINANGKIVFGATVELLNMKTEQL
                     VCYQIVGEDEADIKLNLISIRSPIARALIGKEAGDVVAVDAPGGKVEYEILGVRYE"
     gene            complement(1117..>3424)
                     /gene="carB"
                     /locus_tag="VE844_13775"
     CDS             complement(1117..>3424)
                     /gene="carB"
                     /locus_tag="VE844_13775"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020565795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HZC02373.1"
                     /translation="RSSALASKATGFPIAKVAAKLAVGYTLDELANEITGSAIPASFE
                     PTLDYVVTKVPRFTFEKFPQANDRLTTQMKSVGEVMAIGRTFQESLQKALRGLETGAH
                     GLNERLDLDSEEASVILQYELRVPGADRVWYVADAFRSGMSIAEVYELTRIDPWFLAQ
                     LEDLIQEEGSVRAQGIAALDYNRLVSLKRKGFSDARLASLLGCGEGDIRRLRHGLGIR
                     PVFKRVDSCAGEFKTATAYLYSTYEEECEARPSAREKIMVLGGGPNRIGQGIEFDYCC
                     VQAALAMRELGYETLMVNCNPETVSTDYDISDRLYFEPVTLEDVLEIIELEKPKGVIV
                     QYGGQTPLKLARPLEAAGVPIIGTSPESIDLAEDREQFQQLLMRLGLRQSPNRTVRDV
                     SQAAQLARAIGYPLVVRPSYVLGGRAMEIVYNEQDLHTYLKQAVAVSNESPVLLDRFL
                     EQAIEIDVDAICDGEAVLIGGIMEHIEQAGVHSGDSACSLPPYSLSRAIQEQLREQTR
                     CLARALRVVGLMNVQFAIQGPDIYVLEVNPRASRTVPFVSKATGIPLARNAAQCMVGV
                     SLKEQGLTRERIPDYYCVKEAVFPFIKLPGVDPLLGPEMKSTGEVMGVGLSFGEAFAK
                     AQFAAGIELPKGGRVFISVRDADKERVEQVARGLSELGFEIIATRGTAKALKEAGIAC
                     QVVNKVREGQPHIVDRIKNDEIDLIINTTEGKQAIADSFTIRGSALQRKIAYTTTMAG
                     AIATVMALKQGEAGRLSRLQELHKELKS"
BASE COUNT          761 a         1071 c          824 g          768 t
ORIGIN      
        1 agtgcgcgat cacataaatc tctgcggaac gcccccgaga ggcgcgtggt ttacgggtat
       61 ataccttctg aaataaccgg ctgagttgct taaggtaggc atcgatctcc tctccctgga
      121 agaccttcac caacaaactg cctcccggcc tcagtacctg gatagcacac tccactaccc
      181 tctccgcaag gtgcattatt tgtgcctggt ctcgaacctt agtgccgctt atattaggcg
      241 ccatatccga taacaccaga tcggccattt tattattcaa tatatcgagc aacgaccgca
      301 ctactgcttc ctcgcatacg tctccctgga taaaaatcac ctgcttgagg ggaatcatgg
      361 gcaacacatc aaccgctatc aaccgccctt gcggccctat agccgccgct gccacttggc
      421 tccagccgcc tggggcagca cccagatcaa tgaccgtcat ccccggcttt aagatctgtt
      481 ctcgcgcgtt gatctcaatg agcttaaagg ctgcccgtga gcgaaaacct ccctgtctcg
      541 ctaatttgac gtatggatcg gaggaatgtt ccttaagcca tcttaagcta cgtgatcggc
      601 tgctcattgc ggatcgaaac tccttgccaa aagacccctg catttattca tacctgaccc
      661 cgaggatctc atactcaacc ttacctcctg gagcatccac ggcgacaaca tcgccggcct
      721 ccttgccgat gagcgctcgg gcgatcgggg atcgaatgga gatcaaattg agcttgatat
      781 ccgcctcatc ctcacccacg atctggtaac agaccaattg ttccgtcttc atattaagca
      841 gttcgacggt ggcgccgaac acaatcttgc cgttggcgtt aataatgctt acatcgatga
      901 tctgcgcatt agacagcttg ccctcaattt cggcgatccg tccctcaata aagccctgct
      961 gctcacgggc agcatgatat tcggcatttt cgctgagatc accgtgcgat cgcgcctcag
     1021 caattgcttg aataatgcga gggcgatcgt gggtcttaag ccgctgcaac tcctcgcgaa
     1081 gcctttgcgc ccccagcgtg gtcatgggtg acttgctcat gatttcaact ccttatgcag
     1141 ttcttgcaat cggctgaggc gaccagcttc cccctgtttt agcgccatca ccgtagctat
     1201 agcccctgcc atcgtggtgg tataggctat cttgcgctgc agcgccgagc ctcgaatcgt
     1261 aaatgaatcc gcaatggctt gcttaccttc ggtggtattg attatcaggt caatctcatc
     1321 attcttgatc ctatcgacaa tatgcggttg gccttcccgg accttgttca ctacttggca
     1381 ggcgatcccg gcttccttca atgccttggc tgtccctcgg gtcgctatga tctcaaagcc
     1441 aagctcagat agaccacggg cgacctgctc tacccgttct ttatcggcat cccgcacact
     1501 gataaagact cttcctccct tcggcagctc tatgcctgca gcaaactgcg ccttggcaaa
     1561 ggcctcaccg aaactgagac ccactcccat cacctcaccg gtagacttca tctccggccc
     1621 aagcagcgga tcgactccag gtaatttaat aaatggaaat accgcctcct ttacgcaata
     1681 ataatccggt atccgctcgc gggttagccc ttgttcttta agactcaccc ccaccatgca
     1741 ttgggccgcg tttctggcca gagggatacc ggtcgccttg gagacgaagg ggacggtcct
     1801 ggaggcccgc ggattcacct cgagcacata gatatctggc ccctggatcg caaactggac
     1861 gttcataaga ccgacaaccc gcaacgcccg ggctaaacac cgcgtttgct ccctaagctg
     1921 ttcctggatc gcccgggaga ggctataagg cgggagcgag caggcagaat ccccggaatg
     1981 aacaccggcc tgctcgatat gctccatgat gccacctatc aacaccgctt caccgtcgca
     2041 gatggcatcg acatcgatct caatcgcttg ctccagaaag cgatccaaca gcaccggcga
     2101 ctcgttggaa accgccacag cctgtttcag gtaggtgtgc agatcctgct cgttatagac
     2161 gatctccatc gctcgccccc cgagcacata ggatggccgc accaccaggg gataaccgat
     2221 ggctctcgcc aattgcgctg cctggcttac atcgcgcacg gttcggttcg gtgattggcg
     2281 taagccgagc cgcattaaca actgctggaa ttgctcccga tcctcggcga gatcaatgga
     2341 ctccggcgaa gtgccgatga tcgggacgcc tgccgcctcc aaggggcgcg caagcttcaa
     2401 gggggtctga ccaccgtatt gaacgatcac ccctttaggt ttctcaagct cgatgatctc
     2461 gagcacatct tccagggtga ccggctcgaa atacagacgg tcggaaatat cgtaatcggt
     2521 tgataccgtc tcgggattac agttcaccat aagggtctca taccccaact cgcgcatcgc
     2581 cagagctgcc tgtacacagc aatagtcaaa ctcgatgccc tgcccaatcc gattaggacc
     2641 gccacccaaa accatgatct tctcacgcgc actgggccgt gcctcgcact cttcttcgta
     2701 ggtggaatac aggtacgcag tcgcggtttt aaattccccg gcacacgaat cgacgcgctt
     2761 aaataccggc ctgatcccaa gcccgtggcg caaccggcgg atatctccct ccccacatcc
     2821 caaaagactc gccaggcgcg catcggaaaa tcccttgcgt ttcagagaca ctaagcggtt
     2881 atagtcgagc gccgcgatcc cctgcgctcg tacgctgccc tcctcctgga tcaaatcctc
     2941 aagctgcgcc aaaaaccagg gatcgatgcg ggtcagctca tacacctcgg caatggacat
     3001 acccgagcga aatgcatcgg ccacatacca cacgcgatcc gcgcctggga cgcgcaattc
     3061 atattgaaga atgacggagg cctcttcact gtccaggtcc aagcgttcat ttaatccatg
     3121 ggcaccggtt tctaatcccc gcagggcctt ctgcaaagac tcctgaaatg tcctgccgat
     3181 ggccatcact tccccgaccg atttcatctg tgtggtcaac cggtcattgg cctggggaaa
     3241 tttctcgaag gtaaaccgtg gaaccttggt gacgacatag tcgagcgtcg gttcaaagga
     3301 ggcggggatg gcgctgccgg tgatctcatt ggccagctca tccagcgtat accccacagc
     3361 cagctttgct gccaccttgg cgatggggaa accagtcgcc ttcgaggcca aagcagagga
     3421 acgt
//
LOCUS       DASQSL010001342         1767 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_197582, whole genome shotgun sequence.
ACCESSION   DASQSL010001342 DASQSL010000000
VERSION     DASQSL010001342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1767)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1767
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197582"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..647)
                     /locus_tag="VE844_13780"
     CDS             complement(<1..647)
                     /locus_tag="VE844_13780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02374.1"
                     /translation="MRRNNCTFYKSQQHSHLTLKNAWQILFTISLFLYSVTNILAASL
                     FSDDFHTDTTSEYVVTDTWTQGGQGQFLYDAAGQRARVLTGNDIGLQISRTLPPLKKG
                     TFSVDFHPTKKYSDGGRIVLWLKQDSSNFYKIVNSDGQGPGSIKKIVNGQIVDSASFR
                     AGYSQNMAYTITVNFSAGATTVNAFGQMRVIKTNTNSLWVNSFEIELKQQDASYD"
     gene            849..>1767
                     /locus_tag="VE844_13785"
     CDS             849..>1767
                     /locus_tag="VE844_13785"
                     /inference="COORDINATES: protein motif:HMM:NF033550.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3 family transposase"
                     /protein_id="HZC02375.1"
                     /translation="MGWYDRKTRRVRDLSCGDTRVYLEVEIRRVQCRSGGKLKCERLD
                     FLADNPLYTKRFAWYAGRRCRASTIQDVAKELHLDWHTVKELDKQYMGAQLERAGIPA
                     PKAIGIDEISIRKGHTYRIVVSDLIRGRPIWFGGEDRSEASMNQFYDWLGEKKARGIR
                     LAVMDMWKPFRNATQDRAPQASILFDKFHVMQHLNDALDKVRKAEYARLQGKERRYIK
                     GQKYILLSSRENLTLDGRKALKTLLAANKRLNAAYPLKESFGQLWSYKREGWARRFFE
                     NWKASLKWRRLKPYEKFAEMIERHWEGIAT"
BASE COUNT          405 a          475 c          491 g          396 t
ORIGIN      
        1 ttgtcataag aggcgtcttg ttgttttaat tcaatctcaa aactattgac ccacaggctg
       61 ttggtattgg tttttattac gcgcatttgc ccaaaggcat ttacggtggt ggcccctgca
      121 ctgaaattga ctgtgatggt ataagccata ttctgactat acccggccct aaaggaggca
      181 ctatccacaa tctgaccatt tactatcttt tttatactcc ctggtccctg accatccgaa
      241 ttaacgattt tataaaaatt gctactatcc tgctttaacc acaggactat ccttccacca
      301 tcggaatact ttttggtggg gtgaaaatcc acactaaagg tgcccttctt taaaggcggt
      361 agagtacgag aaatctgcag gccaatatca ttacctgtta gcactcgcgc ccgctgtcct
      421 gccgcatcgt aaagaaattg cccttgtccc ccctgggtcc aggtatctgt caccacatac
      481 tcactggtcg tgtctgtgtg gaaatcgtcg ctgaatagcg acgctgccag aatattcgtt
      541 acagaataaa ggaatagact tattgtaaat aggatttgcc acgcgttctt gagggtcagg
      601 tgactatgct gctggctttt gtaaaacgta caattatttc tcctcattaa attctcctcc
      661 ttaagaaggg tcttcgtgaa atcgtgtggg tagaatcggt catgaaattg cctgagagcc
      721 agtctggatg ctggtttcca tggttgtatg cggttgcaga aactggcatg atttcgcgat
      781 ggctacctca cgcaaacgca agcgtcttct ggacgcatac cgactgcaag gaatgtggtc
      841 gagcgcacgt gggctggtac gaccgcaaga cccggcgggt gcgcgacctg tcctgcggcg
      901 acacgcgagt ctatctggag gtcgagattc ggcgggttca atgccgaagc ggcggcaagc
      961 tgaagtgcga gcgtctcgac tttcttgccg acaaccccct ctatacaaag cggtttgcct
     1021 ggtatgcggg ccggcgctgc cgggcgagca ccattcagga tgtcgccaag gaactgcacc
     1081 tggactggca taccgtcaag gagttggaca agcagtacat gggggcccag ctggagcggg
     1141 ccggcatacc ggcgcccaag gccatcggta tcgacgaaat ctcgattcgc aagggccaca
     1201 cctatcgcat cgtggtgagc gacctgatcc gaggccggcc catctggttc ggcggcgagg
     1261 atcgctcgga ggccagcatg aaccagttct atgactggct gggcgagaag aaggcccgcg
     1321 gcatccggct ggcggtgatg gacatgtgga agccgtttcg caacgccacc caggaccggg
     1381 cgccgcaggc ctcgatcttg ttcgacaagt ttcacgtcat gcagcacctc aacgacgccc
     1441 tggacaaggt gcgcaaggcc gaatacgccc ggctccaggg caaggagcgg cgctacatca
     1501 agggccagaa gtacatcctg ctgagcagcc gggagaactt gaccctggac ggcaggaagg
     1561 ccctcaagac cctgctggcg gccaacaagc ggctgaacgc cgcctacccg ctcaaggagt
     1621 ccttcggcca gttgtggagc tacaagcgcg aaggttgggc acggcgcttc ttcgagaatt
     1681 ggaaagccag tctcaagtgg cggcgcctaa aaccctacga gaaattcgcc gaaatgatcg
     1741 agcgtcattg ggaggggatc gccacct
//
LOCUS       DASQSL010001343         3286 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_11809, whole genome shotgun sequence.
ACCESSION   DASQSL010001343 DASQSL010000000
VERSION     DASQSL010001343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3286
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11809"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..210)
                     /locus_tag="VE844_13790"
     CDS             complement(<1..210)
                     /locus_tag="VE844_13790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02376.1"
                     /translation="MESLPPALLDFISMFRPLLRAEVFDSFTYLLCGLLIGEAKHGTV
                     RASVFAPAHYQPQRLSDLFRCHKLSR"
     gene            695..1012
                     /locus_tag="VE844_13795"
     CDS             695..1012
                     /locus_tag="VE844_13795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02377.1"
                     /translation="MAEQSSNGGFIDIRGPAWMLLYEKLSPDEVDAIFRICGYEILPT
                     GKLSRRYIAIQLDEDKKAVLEAQAKSSGHTAAEEAGAILASALTQLAEAQSDEPGEPA
                     AHE"
     gene            complement(1003..3078)
                     /locus_tag="VE844_13800"
     CDS             complement(1003..3078)
                     /locus_tag="VE844_13800"
                     /inference="COORDINATES: protein motif:HMM:NF033527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3 family transposase"
                     /protein_id="HZC02378.1"
                     /translation="MKRYWTDEELAEHWSLSTAELEILPDRGDHNRLGFAVLLKFIEI
                     EGCFPSSPREVPAAALSHLASQLRIPPTAFIRYDWTGRTGKRHRASIRALLGFRAFSV
                     GDVEPLRDWLCRDVLPSEHNPQHLGDRVLAWCRERHIEPPSNQRLDRIVRSAVRTHES
                     RFFEVTCRQLSPETRTRLDALLLPTGPEEPISAYEAAQEVGDFAPVSTPFGVLKTDPG
                     AVSLASALKELDKLKRLSTLALPADLFTGVPPKVLQTYRLRAAAEPPREMRMHPEAIR
                     YTLLGAFCWQRRQEIIDGLVELLIQVVHRISVRAERRVVKELLSDFQRVHGKTTLLYK
                     LAEAVLAQPDRTVREVVYPIIGPQTLAALVKESCSQGPAYRQHVHTLLRSSYSYHYRR
                     MLPPILDALSFHSNNVAHRPVIEALAWLKAHRSSRRQWVACDEVPIDGVVRRGLQELL
                     IETAPDGEERIHRVNYEICILQALRERLRCKEIWVEGANRYRNPDDDLPADFEHQRST
                     YYQALQLPQDVEVFIAQMQQAMHRALTELDQGLLRNPRVKLRSYGTHRIVLSPLEPQP
                     EPYQLEQLKAEVLRRWPMTSLLDMLKEADLRADLTSAFHSVASRETLDRQALQPRLLR
                     CLYGLGTNTGLKRMAASDEGISYKDLLYVRRRYIQKDALREAISRLVNATFAARMPEI
                     WGEATTAYS"
BASE COUNT          704 a          894 c         1032 g          656 t
ORIGIN      
        1 ccgcgagagc ttgtggcagc ggaacaaatc cgataagcgt tggggctgat aatgggctgg
       61 cgcaaagacg ctggcgcgca ccgtgccgtg cttggcttcg ccaataagca gaccgcacag
      121 caaataagta aaactgtcaa agacttctgc ccgcaacagg gggcggaaca tcgagatgaa
      181 atcaagcagg gccggtggta agctttccat cagtcgtttt ttccgttgtg attgaccgct
      241 tcaacgatga acgactgcgg cgcaaagagc aagctctctg cgccgcttat ttatctctca
      301 aaaaccggga actacagtaa ttaaatctga attagagaaa agaagtggat gagaggtatt
      361 caaggatggc gaggaaggga atctgatgtc aggacacatt tcgtaggagg gggagtgggc
      421 atgagttagc gatttatgag agactggttg tactatgaac ccaacatctc tcttctcttc
      481 tttgcaagac tatatcactg aattattacc cggggcgcat ggggtaacgg tttaccgctt
      541 agctaatgct attacgtaag tgacatcgtt ctgtcgaagg gtgctcttaa cccggtttat
      601 tgttccgttg ctccccatag gccagattga aaaagagtgt tgaaaaccct atccttgtat
      661 ttacccccat gagtaattat aaaaggaggc cccaatggct gagcaatcct ccaatggagg
      721 gttcatcgat atccgcggac cggcatggat gctgctctac gaaaagctga gccccgatga
      781 agtggacgcc atctttagaa tttgtggtta tgagatttta cccacgggta aattgtcgcg
      841 gcgttatata gccatccaat tggacgagga caagaaggct gtgttggagg cacaggccaa
      901 aagctccggg cacacggcag cggaagaggc gggcgcgata ctcgcgagcg cgctcacgca
      961 gcttgctgaa gcgcagtccg atgagccggg cgagccggcg gctcacgagt aggcggtcgt
     1021 ggcctcaccc cagatctcgg gcatccgggc ggcgaaggtg gcattgacca gccggctgat
     1081 cgcttcccgc aaggcatcct tttgaatata gcgccggcgc acatagagca ggtccttgta
     1141 gctgatgcct tcgtcgctcg ccgccatgcg cttgagcccc gtgttcgtgc ccaggccata
     1201 cagacagcgg agcagacggg gttggagtgc ttggcggtca agggtctcgc ggctcgccac
     1261 gctgtgaaag gcgctggtca agtcggctcg gaggtcggcc tctttcaaca tatcaaggag
     1321 gctcgtcatc ggccagcgcc gcaagacctc cgctttcaac tgctcgagct ggtagggctc
     1381 gggctgcggc tcaagcggtg acagcacgat gcggtgggtg ccgtaggagc gaagcttcac
     1441 tcgtggattg cggagcagcc cctgatcgag ctcggtgagg gcccggtgca tcgcctgctg
     1501 catctgggca atgaagacct ccacatcctg cggcagctgc agggcctgat agtacgtgct
     1561 acgctggtgc tcaaagtccg cgggcagatc atcgtcaggg ttacggtaac ggttggcacc
     1621 ctcgacccag atttctttgc agcgcagccg ctcccgcaac gcctgcagaa tacaaatctc
     1681 gtagttgaca cgatggatgc gctcctcgcc atcaggggcc gtctcgatga ggagttcctg
     1741 cagacctcga cgtaccacgc cgtcgatggg cacttcgtca caggcgaccc actgccggcg
     1801 actgctgcgg tgggccttga gccaagcgag cgcctcgatg accggccgat gggccacgtt
     1861 gttcgaatgg aagctgaggg catcgaggat cggtggcaac attcggcggt aatggtagct
     1921 gtaagagctg cgtagcaggg tatgcacgtg ttggcggtag gccgggccct gggagcagga
     1981 ctctttgacg agcgcggcga gggtctgtgg gccgatgatc ggatagacga cctcgcggac
     2041 cgtgcggtcg ggctgagcga gcaccgcttc ggcaagcttg tagagtagcg tggtcttacc
     2101 gtgcacgcgc tgaaaatcgc tcagcagctc tttgacgacc cgcctctcgg cccgaaccga
     2161 gatgcggtga accacctgaa tcaggagctc gaccaggccg tcgatgatct cctgccgacg
     2221 ttgccagcaa aacgccccaa gcagcgtgta gcggatagcc tcggggtgca tgcgcatctc
     2281 gcgcggcggc tcggcagcgg cccgtaggcg gtaggtctgg agcaccttgg gtggcacgcc
     2341 cgtgaagaga tcggcgggca gagccagtgt cgaaagccgc ttcagcttgt ccaactcctt
     2401 gagcgcacta gccaagctga cggcgccggg gtccgtttta agcacgccaa aaggcgtaga
     2461 cacaggggcg aaatcgccta cttcctgggc ggcctcatac gctgatatcg gctcctccgg
     2521 cccggtgggc agaagcaaag catcaagccg ggtgcgggtc tccggcgata gttggcggca
     2581 agtgacctcg aagaatcgag actcatgagt ccgcactgcg gaccggacga tgcgatcgag
     2641 gcgttggttc gacggcggct cgatgtggcg ttcccggcac caggccagca ctctgtcacc
     2701 gaggtgctgg ggattatgct cagacggtag aacatcccga cagagccaat cccgcagtgg
     2761 ctcaacgtcg ccgacactga acgcccgaaa gccgagaaga gcgcggatgc tcgcgcgatg
     2821 gcgtttgccg gtgcggccgg tccagtcata tcgaataaag gcggtgggcg ggatgcgcag
     2881 ctgggaggcc aggtgactca gtgccgcggc gggtacctcg cgcggggagc tgggaaaaca
     2941 tccttcgatc tcaataaatt tgaggaggac tgcaaaaccg agccggttgt gatcgccgcg
     3001 atcgggcaat atctccagtt ctgcggtgct caacgaccag tgctcagcca gctcctcgtc
     3061 ggtccagtag cgcttcacga aaatgcctgc ctttgtagag agttaggtta gcatgaagca
     3121 tggatcatat aggagtctcg ggggcacgtg tgaagaatat tagccttgcc tgatgtggcc
     3181 cctggtgaca gcttccctag ttctgggcct atataaagcg caggacgcgc cctgcccaat
     3241 gcactttgac atggtttttt ccacaagccc tcaatttaca gagaca
//
LOCUS       DASQSL010001344         1460 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_63947, whole genome shotgun sequence.
ACCESSION   DASQSL010001344 DASQSL010000000
VERSION     DASQSL010001344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1460
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63947"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..190
                     /locus_tag="VE844_13805"
     CDS             <1..190
                     /locus_tag="VE844_13805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02379.1"
                     /translation="LLHELDRLGLATPKDPSVQQDVVGFELDARRQTDQPASEQNNEY
                     DRNPRKEPSKLLTEQAQA"
     gene            805..1329
                     /locus_tag="VE844_13810"
     CDS             805..1329
                     /locus_tag="VE844_13810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZC02380.1"
                     /translation="MPGVGDPPTQRCRYAAVDFVTVGVRAGGHQATKDASGLVLLLPN
                     GQSDRMDEEEVRAKLGRHWEYGGSDQDIAHEIYHDDAVLEFPQSGERFVGVENFREWR
                     RIYPASLAFEIRNIRGRDDLWVAENSISYNEGPWNLTVSILEFRGDKVASESIYITQP
                     WEPPEWRAPWRASP"
BASE COUNT          319 a          425 c          439 g          277 t
ORIGIN      
        1 actccttcac gagctcgaca ggctcggact cgccacacca aaagacccaa gcgtccagca
       61 agacgtggtg ggcttcgagc tggacgcccg ccgccaaacc gatcaacccg catccgagca
      121 aaacaatgaa tacgatcgaa atcccaggaa agaaccgtct aaattattga cagaacaagc
      181 gcaggcttag aagctatggt caaaaagcat cggtagtcat aagcggaaga actggtgatg
      241 gacgctagcg tagacggtcc cgatccgcgc ataccaaggt atattgggcc tgtttggcgt
      301 agataaaagt gaagatggtt gatttacgat cagggttacc acggctcctc gatcgcacgc
      361 cgccgatcgg cacgatcccc acaaacacct ctgtgtgaac gctgattagc cgtacgtccg
      421 cgtagctgag agtgtcatcg cgtggcgttg aactgctgtg acgtgttggc gtgtatcggt
      481 ctgcgcggac tggttgcgtc gcttttgctg acgactcgct gacgatgatc atgctgagtg
      541 ttggaagact tctacatcgg gcaagccagg atcgatctcc attgagacgc cgtcgccccc
      601 ttgcagcgct accgctcagg cgctggtcag cgacatcaga acgcaccctt cagaccgctg
      661 agcgtcaccg gcctggatat gaaggagcac accggtgatg accggcgcgg acggtgctca
      721 atgtttgtca gcaattgtca cgcgtcgccg acgtctaacg gcatagagac ggcatgatct
      781 tcaccgcgct gggatcaacc cagcttgcct ggagttggtg atccaccgac gcaacggtgc
      841 cgttacgcgg cggtcgactt cgtcaccgta ggagtgcggg ctgggggcca tcaggcgaca
      901 aaggatgcgt cgggcctggt cttgctactc ccgaacgggc agtctgaccg catggatgag
      961 gaggaggtaa gagccaagct tgggcgccac tgggagtacg gtggcagcga tcaggacatc
     1021 gcacacgaga tttaccacga cgatgctgtt cttgagttcc cacagtctgg ggagcgcttc
     1081 gtcggcgtcg agaacttccg cgagtggaga cgcatctatc cagcgtctct ggccttcgag
     1141 atccggaaca tcagaggccg agatgacctc tgggtcgcgg agaactcgat cagctacaac
     1201 gagggaccct ggaacctcac tgtcagcatc ctcgagtttc gaggcgacaa ggtcgccagt
     1261 gaatcgatct acatcaccca gccgtgggag ccgccagagt ggcgggcgcc ctggagagct
     1321 tcgccgtagc gcctccgtgc cgatgtgacg ggatacccac gcctggtaac catcactatc
     1381 cgcgcccccg tcctggggcc ttccccgagc ggaggcccac cgaaggcaca tgcgtttggt
     1441 caagagcttg gggatctccc
//
LOCUS       DASQSL010001345         1482 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_49688, whole genome shotgun sequence.
ACCESSION   DASQSL010001345 DASQSL010000000
VERSION     DASQSL010001345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1482
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49688"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1196)
                     /locus_tag="VE844_13815"
     CDS             complement(<1..1196)
                     /locus_tag="VE844_13815"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HZC02381.1"
                     /translation="MPSTFELNLHTLVLIGYALVTASALGAEEAASEEKEPAPAEKPQ
                     QLPEVTVTGAPPDTIGYKTTRATTATKTDTPIFDLPVSIQVVPREVMDDRQVILLQEA
                     LETVSGVVPFAGGGSAFDNPRIRGFEAFRNVYRDGFRGRFFGNYIQSTAHLERVEVLK
                     GPASVLYGRMEPGGLVNQVSKQPLATPYYSLQQQFGSFDLYRTTLDATGPLTEDKSLL
                     YRVNFEYLDSGSFRDFVGTETVFVAPVLTWNLNDRTHITLNLQYQHSDRVTDRGLVAI
                     GDPPRIAPIPFSRYLGEPFNNDDVDDLQAFFLLTHDFNPDWTVNLRFSTQQFDAHYLA
                     VEGTGTLLADNRSVERTFFEEIDDIQNYNALLDITGRFRTGGIKHTVLLGADYYLDEF
                     DGPFVFT"
BASE COUNT          297 a          419 c          455 g          311 t
ORIGIN      
        1 gtgaatacaa acggcccatc aaactcgtca aggtaatagt cggccccgag cagcacggta
       61 tgtttgatcc ccccggttcg aaaacgccca gttatatcca gtaaagcgtt gtaattctga
      121 atatcatcta tctcctcaaa aaaggtgcgt tcaacgctgc ggttgtcagc gagcaaggta
      181 ccggtccctt cgaccgccag ataatgcgcg tcaaattgct gggtcgagaa acgcaggttc
      241 accgtccaat ccgggttgaa gtcatgggtg aggagaaaga aggcctggag gtcgtcgaca
      301 tcgtcgttgt tgaacggctc gccgaggtag cggctgaagg ggatgggcgc aatgcgggga
      361 gggtcgccga tggcaacaag acctcgatct gtaacacgat cggagtgctg atattgcaag
      421 ttgagggtga tgtgggtacg gtcgttcagg ttccaggtca agaccggcgc tacgaagaca
      481 gtttcagtcc cgacgaaatc ccggaacgag ccgctgtcga gatattcgaa attgacccgg
      541 tagaggagtg atttgtcctc ggtcagcggg ccggtggcgt ccagggtcgt ccggtagaga
      601 tcgaaggagc cgaactgctg ctgcagggaa taataaggtg tcgccaaggg ttgcttggac
      661 acctgattga cgaggccacc cggctccatg cggccgtaga gcaccgaggc cggacccttc
      721 aaaacttcca cccgctcgag atgggccgta ctctggatat agttgccaaa gaaccgcccc
      781 ctgaacccgt cccggtagac gttgcggaat gcttcgaatc cgcgaattct ggggttatcg
      841 aaggcgctgc cgccgccggc aaacggaacc acgccgctca cggtctccag cgcctcctga
      901 agaaggatca cctgccggtc atccatgacc tcacgcggca ccacctggat ggacactggt
      961 aggtcgaaga tcggcgtgtc ggtcttggtg gcggtggtgg cgcgggtggt cttgtagccg
     1021 atggtgtcgg gcggcgcgcc ggtgacggtg acctccggca actgttgcgg cttctctgcg
     1081 ggcgccggct ctttctcctc cgaagccgcc tcctccgcgc ccaaggcgga ggccgtgacg
     1141 agcgcgtagc cgatcaagac taaggtgtgg aggttgagtt caaatgtcga tggcatagcc
     1201 aaatcctttc attcattctt gttggttgtc ggctggctat cccgaaggaa tggctggctg
     1261 gttcgttaag cggatagtgc gtaccgcgcc ccctactgaa actcttcgtc ctctggcgtt
     1321 agttttcgcg ctgctctacc caaccagcgc gggcttggtc gcgatcgacc tgcctgctat
     1381 ccttcagtgc acattatcgc tgcgcctcat ggctgcaacg gcaccgtcac gaaatccatc
     1441 ttcgtgatcc cgccatgctg cgccgcggcc atcacctggg cg
//
LOCUS       DASQSL010001346         1058 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_104593, whole genome shotgun sequence.
ACCESSION   DASQSL010001346 DASQSL010000000
VERSION     DASQSL010001346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104593"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..985)
                     /locus_tag="VE844_13820"
     CDS             complement(<1..985)
                     /locus_tag="VE844_13820"
                     /inference="COORDINATES: protein motif:HMM:NF024991.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZC02382.1"
                     /translation="MTATAAIRKKRRQGSRAADLTEDQQAAYVVAADFIEGDDREMVI
                     AGAAGTGKTTVIAHVVKALVRRGLKVAITAPTNKAVGVLSQKTREVVGNYCPNVWVGT
                     IHALLGLKPELDERYGRQFLRQSGRPKTEEGMVIVVDECSMVDQNLLLYIRAESAKIG
                     AKVLYVGDWYQLPPVFERGSLTFSVPRQAKLTQVIRQARDNPILSLATEIREVLDGAI
                     FPMLETRKRRGLGVEVLKPREFERALKRHFLSTDYDTDPDHCRALCWTNGRVHEYNQR
                     IRGWILGEEAKRPYVAGEVVSAVRPIVQDERVLVPTDGYSTILEVVRLPGDH"
BASE COUNT          198 a          352 c          276 g          232 t
ORIGIN      
        1 cgtgatcccc gggtaggcgc accacttcga ggatcgtgct atagccatcg gtaggtacaa
       61 gcacccgctc atcctgcaca atcggccgta cggctgaaac tacctcgccg gctacatagg
      121 gccgcttggc ctcctcaccc aagatccacc cgcggatccg ctggttgtac tcgtgcaccc
      181 ggccgttagt ccagcagagc gcccggcaat gatcgggatc cgtgtcatag tctgtgctga
      241 ggaagtgccg cttaagcgcg cgctcgaact cgcgaggttt gagcacctcc accccaagcc
      301 cgcgcctttt ccgtgtctca agcattggga agattgcccc gtctaagacc tcgcggatct
      361 cggtggccaa gctcaagatc gggttgtctc ttgcttgtcg gatcacctgg gtgagtttcg
      421 cttgccgggg tactgagaag gtgaggcttc cccgctcaaa gaccggtggc aattggtacc
      481 agtcacccac atagagcacc ttggcgccga tcttcgcgct ctctgcccgg atatagagca
      541 agaggttctg atcgaccata gagcactcat cgaccacgat caccatcccc tcctcagtct
      601 tgggcctacc gctttgcctg aggaattgcc gcccgtaccg ctcatccagt tcgggcttca
      661 gccccagtag ggcatgaatg gtacccaccc acacgttagg gcaataattg cctaccacct
      721 cgcgcgtctt ttggctgagc acccctaccg ccttattagt cggtgccgtg atcgccacct
      781 tcagccctcg ccgcaccagc gccttaacga catgggctat cacggtggtt ttgccggtgc
      841 ccgcagcgcc cgcgatcacc atttcacgat catcgccctc gatgaaatcc gccgcgacca
      901 cgtacgctgc ctgctggtct tcggtaagat ctgccgcccg agacccttgc cgccgctttt
      961 ttcggatcgc tgctgttgcc gtcatacctg cgcacctttg agcttaggta gttctcaaag
     1021 cgagtgaatt gaacaagcca agtaagccgg atcctgaa
//
LOCUS       DASQSL010001347         1285 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_11839, whole genome shotgun sequence.
ACCESSION   DASQSL010001347 DASQSL010000000
VERSION     DASQSL010001347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11839"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(88..1092)
                     /locus_tag="VE844_13825"
     CDS             complement(88..1092)
                     /locus_tag="VE844_13825"
                     /inference="COORDINATES: protein motif:HMM:NF033547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HZC02383.1"
                     /translation="MAVLSYVHQLFSAEQCQAYIHTLRWKDRRLQCPRCQSHDVDPWG
                     TYHYRPGCKRYRCQSCQRTFNDLTNTLLHQSQRPLAYWLLATFLLCLTCSSRRIAGEV
                     GVHIRTSYRWCWWLRNAALSYEMHRQLEGTVEADELYHTAGMKGQAKQGGTKHLGRHA
                     RGRRKKREPGRGHYDKDRPAIIAWVSRQGAVVIQATRDFTVKTVQKAADIAVHAGSRL
                     YTDSASSYRAVKGYVHDYVNHTKQEYARGEVHENRAECLFSLLKPYLRVFRGISKTNL
                     PGYVGFFQFLRNFRQQTAFEQAELILQAALDPTIASRARRGEFVTCVDHVHLLQTAIN
                     "
BASE COUNT          255 a          382 c          361 g          287 t
ORIGIN      
        1 tagcgccgcg gccgagacgc ggcaacgttt ggaaccatct ccctctccct ctgggggctt
       61 tgcctaagaa ttcctaataa aggtcgctca atttatcgcg gtttgtagaa gatgaacatg
      121 gtccacgcac gtgacaaact ctccccttcg cgctctgctc gcgatcgttg gatctagcgc
      181 cgcctgtaag atcaactcgg cctgctcgaa ggcagtctgc tgccgaaagt tccgcaagaa
      241 ttgaaagaag cctacgtatc ctgggaggtt ggttttgctg atgccacgaa atacccgtaa
      301 gtacggcttg agtagggaga agagacactc ggcccgattc tcatggacct ccccgcgtgc
      361 atactcctgc ttcgtgtgat tgacatagtc atgtacatag cccttcacgg cccgatagct
      421 gctagccgag tccgtgtaca gcctactgcc cgcgtgcacc gcgatatcgg ccgctttctg
      481 caccgtcttc accgtgaaat cgcgggtcgc ctggatgacg acagcgccct ggcggctgac
      541 ccacgcgatg atggccggcc ggtctttgtc atagtgcccc cgaccgggct cacgtttctt
      601 gcggcgccct cgcgcgtggc gacccagatg ctttgtgcca ccctgtttgg cctggccctt
      661 catgccggct gtgtgataga gttcgtccgc ttcgacggtg ccctccaatt gccgatgcat
      721 ttcataagag agcgctgcat tgcgcagcca ccagcaccag cgatagctcg tccggatatg
      781 gacccccacc tctcccgcaa tgcgtcggga tgaacaggtg aggcacaaca gaaaggtggc
      841 aaggagccag tacgccagcg gtcgttgact ctggtggagc agcgtgttgg tcagatcgtt
      901 gaaggtgcgt tggcagctct ggcaccggta gcgtttgcac ccgggccgat agtggtacgt
      961 gccccatgga tcaacatcgt ggctctggca tcggggacac tggagtcgcc gatctttcca
     1021 ccgcagcgta tggatgtagg cctgacactg ttcagcgctg aagagctggt ggacatatga
     1081 gagcacggcc atgggtgagc ctctcctgtg agtctgaaat cgagtcaaaa acggagaggt
     1141 gattctcacc tatttcgcac gtgtttacgc gtctacaaac cgcgataaat tgagcgacaa
     1201 ccctacggtt cttgagacac accgcttccc ctttatcctt agcccgttgt gcagacgcct
     1261 tctggccaaa accaacttgc ggcag
//
LOCUS       DASQSL010001348         1082 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_132518, whole genome shotgun sequence.
ACCESSION   DASQSL010001348 DASQSL010000000
VERSION     DASQSL010001348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132518"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(197..>1082)
                     /locus_tag="VE844_13830"
     CDS             complement(197..>1082)
                     /locus_tag="VE844_13830"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="oxaloacetate decarboxylase"
                     /protein_id="HZC02384.1"
                     /translation="PMSKAIHPARQLRSLMTKPGIIRSLGAHDVLTALLIEQAGFESV
                     FIGGFGTSASLYGLPDLNFLGLAEMAEAVRRMTHRVSIPVIADGDTGHGDLHNVMRCV
                     AEFEGAGAAGIILEDQIFPKRCGHFEGKQVIPAEEMVLKFKAAVRARSNPDLIFIART
                     DAREPYGLNEAIDRINRYCDARADVAFIEAPLSIAELETICRRVEYPKFVNMLAFGKT
                     PILSVAELEQMGFKMVVAPIDSVLLTARIMREMAEVFKRDGHTRALADRMVGFDEIKA
                     ILGVDEYLSLRGEFARDS"
BASE COUNT          270 a          307 c          282 g          223 t
ORIGIN      
        1 aaccgccata ccaatatatt taagtcattg atttaaacaa aaataattga aatatagaga
       61 aactccagga gagcggcctg tagtagatca gcgacttcgc aagtggttga aaagggcttg
      121 ctggctgctt ttacagggat caatagcgca tgtggtttag ctctgggagc aatgtcgtga
      181 aggcgcaact ataagttcat gaatccctag caaactcgcc tcgtagggag agatactcat
      241 ctactcccaa gatcgcttta atctcgtcaa atccgaccat ccggtcggca agcgcccgcg
      301 tatgcccatc gcgtttaaag acctcggcca tctcacgcat gatccgggcc gtgagcagca
      361 ccgaatcgat gggggccacc accatcttaa aacccatctg ctcaagctca gcgacactca
      421 gaataggcgt tttgccgaag gccagcatat tcacaaactt gggatattcg acccggcggc
      481 agattgtctc caactccgcg atagagagcg gcgcctcgat aaaggcgaca tcggccctag
      541 catcgcaata gcggttgatc cggtcgatag cctcattgag cccatagggt tcgcgggcat
      601 cggtgcgggc gataaagata agatccgggt tgcttcgggc acgcacggcg gctttgaatt
      661 taagcaccat ctcctcggct gggatcacct gcttgccttc aaagtgcccg caacgcttgg
      721 ggaagatttg atcctccagg atgatcccag cggctccggc gccttcgaat tcagccacac
      781 agcgcatgac attgtggaga tccccatggc ctgtatcacc gtcggcgatc accggaatcg
      841 atacccgatg ggtcatccgg cgcacggcct ccgccatctc ggccaggccc aggaaattca
      901 gatcaggcag accatagagg ctcgcgctag taccgaaccc gccgatgaac accgactcaa
      961 accccgcctg ctcgataagc aaggcagtca agacatcatg cgctccaagc gaacggataa
     1021 tgccgggctt ggtcattaag ctacgcagtt gacgcgcagg gtgtattgct ttggacatag
     1081 gc
//
LOCUS       DASQSL010001349         4301 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_147026, whole genome shotgun sequence.
ACCESSION   DASQSL010001349 DASQSL010000000
VERSION     DASQSL010001349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4301
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147026"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(73..1395)
                     /locus_tag="VE844_13835"
     CDS             complement(73..1395)
                     /locus_tag="VE844_13835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004420124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HZC02385.1"
                     /translation="MPKARALVVDDEPAIRELLEITLERMDIACRTVADFAGACELLK
                     REAFELCLTDMRLPDGNGLDLVCHIQRDYPNTPVAVITAHGSMETAIQALKSGAFDFV
                     TKPVDLAVLRALVTSALRLPERHIETPSRLIGASKVMQKTRATIAKLARSQAPVYISG
                     ESGTGKERVARMLHEQGPRAGQPFVPVNCGAIPQELMESEFFGHKKGSFTGAVADKPG
                     LFQIAHGGTLFLDEVAELPLHMQVKLLRAIQEKSIRPVGGQREIPVDVRILSATHRNL
                     AALIKEGRFRQDLFYRINVIQLDVPPLRERREDITTLVDFILDRLAREAQATKPFISE
                     AALKGLMAYQFPGNVRELENILERAMTLCEGGRIEFDDLQLPRKSLEEEIAEQDEDLT
                     LTSYLDNVEKQKILAALEQTRWNKTAAARLLGISFRALRYRLEKLGLD"
     gene            complement(1361..2290)
                     /locus_tag="VE844_13840"
     CDS             complement(1361..2290)
                     /locus_tag="VE844_13840"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HZC02386.1"
                     /translation="MSRRAPCAHHPELYEHVCSWLKQPHPAARLMCPVSRETDLLISM
                     ADLGPGPSAGILIFLEDAAVTRQRAQQLKLASLGQLTASIAHEIRNPLGAISHAGQLL
                     SESSSRPPEDQRLTRIIKEHSERINRIIENVLQLGHRDNPVPESFPLGLWLQSFVEEF
                     TEYKRLSPVQITLNIEPADIEVRMDRSQLHQIVWNLCENGLRYSRGTPLLELQGGLKS
                     ISERPYLDVIDHGPGIPRDLADHIFEPFVSRNSTGTGLGLYIAGELCECNQASLSLHA
                     KPIRAAASGSTSPILIASNGWPDAESTCTRCGR"
     gene            complement(2227..3111)
                     /locus_tag="VE844_13845"
     CDS             complement(2227..3111)
                     /locus_tag="VE844_13845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02387.1"
                     /translation="MSIVGFMFLIKKLFMRVGTSIAPMSIAKPVPIRKSMLLLPQDNT
                     LIHIETAWKALRYFNLYRIILSSLFVVLFWTNSLPSPFGGYQPRLFAVALGSYFVIAI
                     IVQFAAEHRTIPYKTQVVGQVLFDILTITVLMSTSGGVNSGFGMLLVVSIAASSLLIT
                     GGTAIVLAAIASLAVLGSEIYALEHALVPKANFTQGGLLGATFFATALLSHALASRIR
                     QSEALAAQRGVDLANMARLNAHIVQRMQSGIIVLDPERQVRLINTSALALLGLSGPCQ
                     GEHLARITRSSMSTCVRG"
     gene            3366..>4301
                     /gene="sucC"
                     /locus_tag="VE844_13850"
     CDS             3366..>4301
                     /gene="sucC"
                     /locus_tag="VE844_13850"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002684763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HZC02388.1"
                     /translation="MNLHEYQAKQLFQEYSIPVPPGKPAHSIKEAVDHAEALKGPAWV
                     IKAQVHAGGRGKAGGVKFADSIEKLEAIVRTLLGSQLITKQSAPEGQPVNCVLVQCAA
                     TFTAEIYLAMLVDRKAKCLAVIASSAGGMDIEEVAAQHPEKIITVPIDPLLGLQNYQS
                     RRIGFALGLAEPQRRQLAGILSAMYRLFLDKDLSLIEINPLVVTDSGNLEALDAKVII
                     DDNALFRQSALAEWRDPTQEDPKEAIARRYDLNYVSLDGDIGCMVNGAGLAMATMDII
                     KLHGGKPANFLDVGGGATAERVAEAFKLLVSDTRVR"
BASE COUNT         1007 a         1212 c         1213 g          869 t
ORIGIN      
        1 agaataaggg gaatacactg aaatgtcaaa aagacctgca ggaggcctta cacgcacaag
       61 gagaaagccc gcctaatcca gccccagctt ctccaatcga taacgcagtg cccggaaact
      121 gatccccaag aggcgcgcgg cggcggtctt gttccatcgg gtctgctcga gggcagccag
      181 gatcttttgt ttctctacat tatcgaggta ggaggtcagc gtaagatctt catcctgctc
      241 ggcaatctcc tcctcaagcg actttcgcgg caattgcaga tcgtcgaatt cgatccggcc
      301 tccctcgcaa agcgtcatcg cccgctcaag gatattctca agctctctta cattgcccgg
      361 gaattgatag gccataagcc ccttgagcgc cgcctccgag ataaaaggct tggttgcctg
      421 cgcctcacga gcgaggcgat cgaggataaa atccaccagg gtagtgatat cctcacgacg
      481 ttcgcgcaag ggcggcacat ccaactggat aacattaatg cgataaaaca gatcttgccg
      541 gaaccggcct tccttgatca aggccgcgag gttccgatgg gtcgcgctta agatccggac
      601 atcgaccggg atctcgcgct gccccccaac cggccgtatg gatttctcct ggatggcgcg
      661 cagcaacttt acctgcatgt gcaaggggag ctcggcgacc tcatcgagga acaaggtgcc
      721 cccgtgagct atctggaaca gtcccggctt gtcggcgacc gcgccggtga aactgccctt
      781 cttatgtcca aagaactcgc tctccatcaa ttcctgcggg atcgccccgc agttgaccgg
      841 aacaaagggc tgacccgcgc gcggtccttg ctcgtgcagc atacgggcga cccgttcttt
      901 acccgtgccc gactcgccgc tgatatagac cggcgcctgg ctgcgggcga gtttagcgat
      961 ggtcgcccgg gtcttctgca tcaccttgga agcgcctatc aagcgcgagg gtgtctcaat
     1021 gtggcgctcg gggagtctca gcgcactcgt caccagtgcc cgcagcacgg cgagatccac
     1081 aggcttggtg acaaagtcga aggcgccgga ttttagggcc tggatggccg tttccatact
     1141 gccatgcgcg gtgatcaccg ccaccggggt attgggatag tccctttgga tatggcaaac
     1201 cagatcgagc ccgttgccat cgggcagtct catatcggtg aggcagagct caaaggcctc
     1261 tctctttaag agttcacagg ccccggcaaa atccgccacg gtccggcagg cgatatccat
     1321 acgctcgagc gtgatctcca gcaactcccg gatcgccggt tcatcgtcca caacgagtgc
     1381 acgtgctttc ggcatcaggc cacccattgc tggcgatcag gatgggcgaa gttgatccgg
     1441 aagcagcagc cctgatcggt ttggcatgga ggctcaagga cgcctggttg cattcacaca
     1501 gctcgccggc gatatacaac ccaagcccgg tgcccgttga attcctggac acaaacggtt
     1561 caaagatatg atcggcgaga tcccggggga tcccgggtcc atggtcgatg acatcgagat
     1621 aaggccgctc cgagatggat ttcaaaccac cctgtaattc gagcaggggc gtcccgcgac
     1681 tgtaacgcag cccgttctcg cagaggttcc acacgatctg atgcagttgg ctccgatcca
     1741 tacgtacctc gatatcggca ggctcaatgt tgagagtaat ttgaactgga gacaagcgct
     1801 tatattcggt aaattcttct acaaaagact gtaaccatag acccagcggg aagctctcag
     1861 gtaccgggtt atcccggtgg ccgagttgca gcacattctc gatgatccgg ttgatccgct
     1921 cggaatgctc cttgatgatg cgggttaaac gttgatcttc ggggggccgc gaggacgact
     1981 ccgagagcaa ttgaccggca tggctgatgg cccctaaagg gttgcggatc tcatgggcta
     2041 tactcgcggt caactgcccg agcgaggcta atttaagctg ctgggcacgc tgccgggtca
     2101 cggccgcatc ctccagaaag atcagaatac cggcggaagg gcccggtccg agatcggcca
     2161 ttgaaattaa cagatcggtc tcccgcgaga cagggcacat caggcgagcc gcaggatgcg
     2221 gttgtttcag ccacgaacac acgtgctcat agagctccgg gtgatgcgcg caaggtgctc
     2281 gccttgacaa ggaccgctca gtcccaagag ggcaagcgcc gaggtattga tcaagcgtac
     2341 ctggcgttcg ggatcgagca cgatgatccc cgactgcatg cgctgcacga tatgggcatt
     2401 caggcgtgcc atattcgcaa gatctacacc gcgctgggcg gccaaggctt cgctctgccg
     2461 gatccggctg gccaaagcat ggcttaagag cgccgtggca aaaaaggtcg cgcccaacaa
     2521 gcccccctgg gtaaaattcg ccttcggcac cagggcgtgc tccaaggcat agatctccga
     2581 gcccaacaca gcgagcgagg caatcgcggc caatacgatc gccgtaccgc cggtgattaa
     2641 taagctgctg gcggcgatgc tgaccaccaa cagcatccca aacccgctgt tcactccacc
     2701 gctggtggac atcaatacgg taatcgttag gatatcgaat agaacttggc ccactacctg
     2761 ggtcttatac gggatagtgc ggtgctcggc ggcgaattgg acaatgatgg cgatcacaaa
     2821 ataactgccc agggcgaccg caaaaagccg gggctgatag ccgccgaagg gtgatggcag
     2881 gctattggtc cagaacaaga ctacaaagag actggatagg atgatccggt aaagattaaa
     2941 gtaacgtaaa gccttccagg ccgtctcaat gtgaattagg gtgttatcct gagggaggag
     3001 gagcatgctt tttctgatcg ggaccggctt tgctatgctc attggagcaa tagatgtgcc
     3061 cacccgcatg aatagcttct tgatcaggaa cataaagccc acaatgctca cattgcacta
     3121 tccttgcaac cgagcggtgg tccctttttt tacgcggggc acccaaagag tgacgataaa
     3181 atgatttgat cagcactacg atcagataga tcatggccag agtaatgatg aggcgcataa
     3241 gatttatagt gataagcaca caggtgtggt aattagggga tgtaaaatca gcttaatagc
     3301 atagacaaat aggtgcgatt cagcgaatac tatctttaat aatccaaaat acctaacaaa
     3361 ctatcatgaa tctgcacgaa tatcaggcaa aacaattgtt tcaagaatat tctattccag
     3421 ttccccccgg caaaccggcc cactcgatca aggaagcggt cgatcatgct gaagccctga
     3481 aaggtccggc ctgggtgatc aaggcgcaag tacacgcggg cggacgcggc aaggccggcg
     3541 gggtcaaatt cgccgacagc atagaaaagc tcgaggccat cgtccgcacc ctgctcggca
     3601 gccagcttat taccaaacaa tcggcgcctg aaggccagcc tgtcaactgt gtcttggtgc
     3661 aatgtgcggc cactttcacc gcggagatct atctggccat gctggttgat cgcaaggcca
     3721 aatgcctcgc tgtgatcgcc tcgagcgcag gcggcatgga tatcgaagag gtcgccgcac
     3781 aacacccgga aaagatcatc acggttccga tcgatccgct cttggggctg cagaactatc
     3841 agagccgccg cattggtttt gccttgggct tggccgagcc acagcgccgg caactcgccg
     3901 gaatactatc ggccatgtac cggctattcc tggataaaga tctgagtctc atcgagatca
     3961 accctttggt ggtgaccgat agcggaaacc tggaagccct ggatgccaag gtcattatcg
     4021 acgacaacgc cttatttcgg cagtcggcgc tggcggaatg gcgcgatcct acccaagaag
     4081 atcccaaaga agccatagcc cggcggtatg atctcaatta tgtcagcctc gacggcgata
     4141 tcggctgcat ggtcaacggc gcagggcttg ccatggctac tatggatatc attaagctcc
     4201 acgggggaaa gccggccaac tttctcgacg tgggcggcgg tgccaccgcc gagcgggtcg
     4261 cggaggcttt taagctcttg gtgtcggaca cgcgtgtgcg g
//
LOCUS       DASQSL010001350         1279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_147035, whole genome shotgun sequence.
ACCESSION   DASQSL010001350 DASQSL010000000
VERSION     DASQSL010001350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1279
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147035"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            28..1089
                     /locus_tag="VE844_13855"
     CDS             28..1089
                     /locus_tag="VE844_13855"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015186399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HZC02389.1"
                     /translation="MYKTKAYSAASETSPLASTTIPRRDPTERDVQIEILFCGVCHSD
                     LHQVRDEWHSVMPTVYPCVPGHEIVGRVTKVGSAVTKFKAGDLAAIGCMVDSDGTCPQ
                     CKAGLEQFCASMTLTYNSPDKHGTAPVNYGGYSDSIVVDERFVLRVPSNLSLAGAAPL
                     LCAGITTYSPMRHWGTTKGKKVGVVGLGGLGHMAVKFAHAFGAHVVVFTTSPNKKEDA
                     LRLGAHEVVVSRNANEMQKHAGSFDFILDAVSAEHDINAYVNLLARDGNITLVGAPEK
                     PLGVSAFGLIFGRRSLSGSAIGGIAETQEMLDFCGAHNITADVEVIPIQKVNEAYERL
                     VKSDVKYRFSIDMASLKSE"
BASE COUNT          287 a          374 c          343 g          275 t
ORIGIN      
        1 gtattttgca tataggagca taaatccatg tacaagacga aggcttactc cgctgccagc
       61 gagacatcac cgctggcctc caccacaatc cctcggcgcg atccgacgga gcgcgacgtg
      121 cagatcgaaa ttcttttctg cggcgtgtgt cactccgacc tccatcaggt gcgtgacgag
      181 tggcacagcg tcatgcccac cgtttacccc tgcgttcccg gtcatgagat cgtcggacgt
      241 gtcacaaagg tcggctcagc ggtcacgaag tttaaagccg gcgacctcgc cgcgatcggt
      301 tgcatggttg attcggacgg cacctgcccg cagtgcaaag ctggcctgga acagttctgc
      361 gcgagcatga cgctcaccta caactcgccg gacaagcacg ggaccgctcc ggtcaactac
      421 ggcggctact ctgactccat cgtcgttgat gagcgcttcg tccttcgcgt cccctccaac
      481 ctcagtctgg ccggggctgc gccgcttctt tgtgccggga tcacaaccta ctcccccatg
      541 cgccactggg gtaccacgaa gggcaagaaa gttggcgtgg tcggtctcgg tggactgggc
      601 cacatggcgg tgaaattcgc tcatgctttt ggagcgcatg tggtcgtttt caccacgtca
      661 cctaacaaga aggaagatgc gctccgcctg ggtgcacacg aagtggtcgt ctcccgcaat
      721 gccaacgaga tgcagaaaca cgccggcagc ttcgacttca tcctcgacgc ggtgtccgct
      781 gagcatgaca tcaacgccta cgtgaatttg ctcgcgcgcg acggcaacat cacgttggtc
      841 ggcgctcccg agaagccgct gggtgtctca gcgttcggcc tcatctttgg ccgccgcagt
      901 ctctctggct ctgccatcgg gggcattgcc gaaacccagg agatgctcga cttctgcggc
      961 gcgcacaaca tcaccgccga tgtcgaggtt atcccgattc agaaggtcaa cgaagcctac
     1021 gagagactgg tcaagtccga tgtgaagtac cgcttctcga tcgatatggc ttctctcaaa
     1081 tctgaatgaa caccgttccg tgaaaggaga aatcaacgca aaagcgcaaa cttggaaaaa
     1141 ggaatcgtaa ctcgggtact accaagatct gtgtaatttt gcaggataag caaaatccat
     1201 ttgacttcaa tctgttacag catgtctagg taaggctaga attctacggt ttactaagtg
     1261 taagaaaaaa ctgaaattt
//
LOCUS       DASQSL010001351         2749 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_197607, whole genome shotgun sequence.
ACCESSION   DASQSL010001351 DASQSL010000000
VERSION     DASQSL010001351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2749)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2749)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2749
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197607"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1908
                     /locus_tag="VE844_13860"
     CDS             <1..1908
                     /locus_tag="VE844_13860"
                     /inference="COORDINATES: protein motif:HMM:NF033527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3 family transposase"
                     /protein_id="HZC02390.1"
                     /translation="NLLTEFKASGPQYRLIYQYFMHNKYARHYRRMLPILLENLTFRS
                     DNRFQPVIEALSVIKRYLDTKHKYFPEEVPLKGVVPRSWEATVIEHKDGTMKIHRKYY
                     ELCVLQKLERALKCKEVWVEGAELFRSPNQDLPADWSPEDKRCSYYHTLGQPLEVKSF
                     IDPLRARLTTALTNFNQDLPRNPYVHIYRPKAKDERSLFAVARLEARPEPQSIGLVKE
                     TIQRRYGMLDLLDVFVEADRLTSFTRFFTHSGTKEVRARETLRPLILLGLFAEGTNTG
                     IKRVAKANARYGYDELLYVRKHYFSVEALRNANGAVVNTILALRNPRLWGEGHACASD
                     GKRFESWSQNLMTEWRSRYRGYGVLIYWHVETNAVCIYSQLRSFSSSEVAAMIEGLIR
                     HDTEMRVEKNFVDSHGQSEVAFAFCHLLGGIRLMPRLKRIKYERLYLPDKAMGGAFPN
                     LAGVLSRPIRWDLIEQQYDEMVKHAVALKTGTATPEAILKRFNSYNVTHPTYKALAEL
                     GKVEKTLFLCDYLPSRELQYEVQEGLNVVERWNGANDFICYGRQGIFATNNYASQEIT
                     TLSLQLLQNCLMLINTILVQQTIDKHQWLDRLKAEDLRALTPLFYEHINPYGLFELDL
                     ERPSFLVQETS"
     gene            1908..2618
                     /locus_tag="VE844_13865"
     CDS             1908..2618
                     /locus_tag="VE844_13865"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HZC02391.1"
                     /translation="MVARSMPPKTMAKRLVRLLRPQRPDYPYLKKVFQHTRELLQIKP
                     RKAQKRLPELLTDEELVAFYETVWHGRHPTHMVLVKLLLFTGVRNAELAHVQLKDVDL
                     NPCQLRIEQGKGKKDRYVLFPKSFRGELTHYLESQKKKGATYLFESNRLQPYSTRRIR
                     QIIKQYALEAGITKRVYPHLFRHQIITYLTKQGIISPKLQLLSGHAEEKSLAIYRDLA
                     LADVAGEYEEAMRAFPIR"
BASE COUNT          649 a          796 c          738 g          566 t
ORIGIN      
        1 aatctgctca ccgagttcaa ggcgagtgga ccccaatacc gcttgatcta ccagtacttc
       61 atgcacaaca agtacgcgcg ccattatcgc cggatgctgc cgatcctcct ggagaacctc
      121 acctttcgga gcgacaatcg ctttcagcct gtcattgaag cactctcggt catcaaacgt
      181 tacctcgaca cgaagcataa atatttcccg gaagaggttc ccctgaaagg cgtggtgcca
      241 cgcagttggg aggcgaccgt gatcgagcac aaggacggaa cgatgaagat ccatcggaag
      301 tactacgagt tatgcgtctt gcaaaagctg gaacgcgcct tgaagtgtaa agaggtctgg
      361 gtcgaaggtg cggagttgtt ccgcagtccc aatcaggatc tgccggcaga ctggtcccct
      421 gaagacaagc gttgcagcta ctatcacacc ctcgggcaac ccttggaggt caagtcgttc
      481 attgatccgt tgcgcgcgcg tctcacgacc gccctgacta acttcaacca agatctgccg
      541 cgtaacccct acgtccatat ctaccgcccg aaagccaaag acgaacggag tttatttgca
      601 gtggcccggt tggaggcgcg gcctgagccg cagagcatcg gtcttgttaa agagacgatt
      661 caacggcgct atgggatgct ggacctgttg gatgtctttg tggaggccga tcggttaacg
      721 agctttaccc gcttcttcac ccattccggt accaaggagg tacgggcacg ggaaaccttg
      781 cgcccactga tcctactggg gctatttgct gaaggcacca acaccgggat caaacgcgtc
      841 gctaaagcca acgcccggta tggctatgat gaactgctct atgtgcgcaa gcactacttc
      901 tcggtcgagg ccttgcgcaa tgccaatggc gccgtagtca atacgatcct agcgctacgc
      961 aatccacggc tttggggcga agggcatgcc tgcgcctccg atggcaaacg gtttgagagt
     1021 tggagtcaga acctcatgac cgagtggcgg tcacgctacc gaggctacgg ggttttgatc
     1081 tactggcatg tggagaccaa tgccgtgtgc atctattcgc aactgcgcag cttctcgtcc
     1141 tcggaagtcg ccgcgatgat cgaaggcttg atccggcatg acaccgagat gcgcgtagag
     1201 aaaaactttg tggattccca cggacaatcg gaggtggcct ttgccttttg ccacttgctg
     1261 ggcggcatcc gcttgatgcc gcgcctcaag aggatcaaat acgagcggtt gtacctgccc
     1321 gacaaagcga tgggtggggc ctttcccaac ctcgcaggcg tactgagcag gccgatccgc
     1381 tgggacctca tcgagcagca gtacgatgag atggtcaaac acgccgtggc gctcaagacc
     1441 ggcacggcca ctccagaagc aattctcaaa cgcttcaact cctacaacgt cacccatccc
     1501 acctacaaag cgctcgccga attgggtaag gtcgagaaga ccctctttct ctgcgattac
     1561 ctgccttcac gcgagctcca gtacgaggtc caggagggct tgaacgtggt cgaacgctgg
     1621 aatggcgcca acgacttcat ctgttacggc cggcagggca tcttcgcgac gaacaactac
     1681 gcaagccaag agatcacgac actttccctg cagctattgc aaaactgcct gatgctcatc
     1741 aacacgatcc tcgtgcagca aaccatcgac aagcaccagt ggctggaccg gttgaaagcc
     1801 gaggacttgc gggcattgac gccgctcttc tatgaacaca tcaatccgta tgggctgttt
     1861 gagctggacc tcgaacgccc ctccttcctg gttcaagaga ccagctaatg gtcgcgcgat
     1921 ccatgccccc caaaacgatg gcgaagcggc tggtacggct attgcgccca cagcgccccg
     1981 attacccgta cctcaagaag gtctttcagc atacccgcga actcttgcag atcaaaccca
     2041 ggaaagccca aaagcgttta cctgaattgc tgaccgatga agagctcgtc gccttctatg
     2101 aaacggtgtg gcacgggcgg cacccgaccc acatggtgct ggttaagctc ctcctcttca
     2161 ccggtgtgag aaatgccgag cttgcccatg tgcagttgaa agatgtcgac ttgaacccct
     2221 gtcaactacg gatcgagcag ggcaaaggaa aaaaggaccg ctatgtgttg ttccccaaga
     2281 gttttcgcgg cgagttgacg cattacctcg aaagccaaaa gaaaaaaggg gccacctacc
     2341 tctttgaatc aaaccgcttg cagccctact cgacacggcg tatccggcag atcatcaaac
     2401 agtacgcgct ggaagcaggt attacgaagc gagtctatcc gcacctcttc cgacaccaga
     2461 tcatcacgta cctaaccaag caaggtatca tcagcccgaa actccagctt ctcagtggac
     2521 atgcggagga aaagagtctg gcgatctatc gtgacctggc gttggcggat gtcgctggag
     2581 agtacgagga ggcaatgagg gcctttccga ttagatgaaa aaggcgcttg ttgggtctca
     2641 tcgcagcttc cctcctgtag gtccaacagg ggctgtggaa tgtctgcgtc gatgagatcc
     2701 ccaattacca agtcttggag cgctatccga ttcgccgcgc gattcccgg
//
LOCUS       DASQSL010001352         1173 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_49718, whole genome shotgun sequence.
ACCESSION   DASQSL010001352 DASQSL010000000
VERSION     DASQSL010001352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1173)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1173)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49718"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            27..173
                     /locus_tag="VE844_13870"
     CDS             27..173
                     /locus_tag="VE844_13870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02392.1"
                     /translation="MRHLSEGKEEISRRSFLKLGFAGVSGAVLLLLSGCLGGEEDEEG
                     EDDD"
     gene            225..506
                     /locus_tag="VE844_13875"
     CDS             225..506
                     /locus_tag="VE844_13875"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: protein motif:HMM:NF013939.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0046417 - chorismate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HZC02393.1"
                     /translation="MNEPELNIHIQRLRAQLDEVDREIVRALNKRAHLVQELAALKRE
                     AGVPLYDPRREEEILRRVAKENPGPIYDATVREIFEVIMHRIRDIESEI"
     gene            631..855
                     /locus_tag="VE844_13880"
     CDS             631..855
                     /locus_tag="VE844_13880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02394.1"
                     /translation="MGLDLISYTPKHHTRCLIYYHPVVNKGGYEDAPYGDQCRYGKEL
                     RVIARLRSSLHYHHPRRERRRDDSYQQRDS"
BASE COUNT          288 a          316 c          331 g          238 t
ORIGIN      
        1 ccacctaacg tgagggagga gtacgaatgc gtcacctcag cgagggcaaa gaagagatca
       61 gccgccgcag cttcctgaag ctcggcttcg ccggggtctc gggagcggtc ctgctcctcc
      121 tttctggttg ccttggcggg gaagaggacg aagaaggcga agacgacgac tagcagttag
      181 gagcaaccgc cccttggcga aggcttatat acaatctcca aactgtgaat gagccggagt
      241 taaatattca catccaaagg cttagggctc agctggatga agtggaccgg gaaatcgtgc
      301 gagcgctgaa caagcgggct cacttggtcc aagagctcgc tgcactcaaa agggaagcgg
      361 gggtaccgct ttacgacccc aggcgcgagg aggagatcct ccgacgagta gccaaagaga
      421 atccgggacc tatttacgac gcaactgtgc gggaaatatt cgaggtaatc atgcatcgaa
      481 tccgagatat cgaatccgag atttgaaagc tcatcgctga ccctattgtg aatagagaaa
      541 atctgcagag gagtacccct aaattttggt gacagtggtg accaagagca ttaactagag
      601 gcagagcggg gcagagcccc tgatagtagt gtgggcttag acctaatctc gtatacgcct
      661 aagcaccata cccgctgcct tatttactac catcctgtag taaacaaagg cggctacgag
      721 gatgccccct atggcgatca atgccgctat ggcaaagaac tgcgggtgat tgcccgtctt
      781 cgaagcagcc tccattacca ccatccccgc cgagaacgac gccgcgacga cagctaccaa
      841 caacgcgatt cgtaggatgt agcgtgagag cggcatgcct ctctacctcc tcttatgtgc
      901 tctcttcccc ctccgtaaga agagtggtct tttaccatcg tggccgttgt gcccccttct
      961 cggcgcgcgc aaacatgggc tttcatgccc tctaggccga atagcttatg agaatgtcat
     1021 ttcaaagaag ctatgttagt ggcggtttgc agggctttga ggcaagcggc tgcattcttc
     1081 cccgacctag caaccgcccg ggcgtgacag gcggtgttac gagcgggtag caagagtcgg
     1141 cagcaaaggg cctgacctcc ggctcatcct aga
//
LOCUS       DASQSL010001353         1225 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_160013, whole genome shotgun sequence.
ACCESSION   DASQSL010001353 DASQSL010000000
VERSION     DASQSL010001353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1225
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160013"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..172)
                     /locus_tag="VE844_13885"
     CDS             complement(<1..172)
                     /locus_tag="VE844_13885"
                     /inference="COORDINATES: protein motif:HMM:NF021634.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HZC02395.1"
                     /translation="MQHKRLVIDANILIRAVLGSRVRGLIEHYCNSVAFYIAEANVDE
                     AEFYLSTELAAKC"
     gene            complement(162..425)
                     /locus_tag="VE844_13890"
     CDS             complement(162..425)
                     /locus_tag="VE844_13890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012537639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prevent-host-death protein"
                     /protein_id="HZC02396.1"
                     /translation="MTQRIGIRELREKLSSFLESSEPIEVTRHGQTIGFFIPIPRRPG
                     QAEREAFLEAGKRLDEELIRLGLKEDELLKEFKQWRRQRNHAA"
     gene            586..1212
                     /locus_tag="VE844_13895"
     CDS             586..1212
                     /locus_tag="VE844_13895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014027842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HZC02397.1"
                     /translation="MNPALNYENRHIPWNKGKLIGQKLPLKLKELWGIRIRLQLANRI
                     RDLALFNLAIDSKLRGCDLVRLRVCDVAQGNRVVSRAIIMQQKTHRPVQFEITEQSRE
                     SVLTWINKAKLRSDQFLFPSRMSGSPHLSTRQYARVIESWVKSIGLDPTAYGTHSMRR
                     TKATLIYRRTKNLRAVQLLLGHTKLESTVRYLGIEVDDALEISEQTEV"
BASE COUNT          291 a          345 c          309 g          280 t
ORIGIN      
        1 cacacttagc tgccaattcg gtggagagat aaaactcggc ctcatcgaca ttcgcctccg
       61 caatatagaa ggctacggaa ttacagtaat gctcgatcag tcctctgacg cgactcccca
      121 gcacggcgcg aatgaggata ttggcatcaa tcaccagacg tttatgctgc atgattccgc
      181 tggcgccgcc actgcttgaa ttctttcaac agctcatcct ctttgaggcc taggcggatc
      241 agctcctcat ccaaacgttt tccagcttcc aggaatgctt cccgctccgc ttgtcctggt
      301 cgcctgggaa tcgggatgaa gaacccgatg gtttggccgt gccgtgttac ctcaatgggt
      361 tcgctcgatt cgagaaacga tgagagcttt tcgcgcagct cacgtatgcc gatacgttga
      421 gtcatgagaa tctccagatt gagatcgcaa ttgtgtacat aatataacat agggatcctt
      481 cggccatcac gccatcggat agcgtcactg gtttctttct ctttacaagc gctggcaaag
      541 cctatggaaa tcgggttcct tcctcaactt agtaaggagc ctgccatgaa cccagcactc
      601 aactatgaaa atcgccatat cccctggaac aagggcaaac taatcggcca gaagctccca
      661 ctcaagctga aagagctttg ggggatccgg atccgccttc agctggccaa tcgaattcgg
      721 gaccttgctc ttttcaactt ggccatcgac agcaagctgc gcggctgtga tctcgtccgg
      781 ttgcgggttt gcgatgtggc gcaaggcaat cgggtggtgt cccgagcgat catcatgcaa
      841 cagaaaaccc accgcccggt gcagttcgag atcacggaac aaagccggga gtccgttctt
      901 acctggatca acaaggcaaa gcttaggtcc gaccagttcc tgtttccgag ccggatgagc
      961 ggatctcccc atttatctac acggcaatac gcaagggtca tcgagtcgtg ggttaaatca
     1021 atcggtctgg acccgacagc ctacggcacc cattccatgc gccgaaccaa agccacgttg
     1081 atctaccggc gaacgaagaa tcttcgtgct gtgcaattgc tgctcgggca cacgaagctc
     1141 gaaagtaccg tgcggtatct cggcatcgag gtggatgatg cactggaaat ctccgagcaa
     1201 acggaggtat agcatttcag cccct
//
LOCUS       DASQSL010001354         1526 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_64008, whole genome shotgun sequence.
ACCESSION   DASQSL010001354 DASQSL010000000
VERSION     DASQSL010001354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1526
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64008"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            211..1437
                     /locus_tag="VE844_13900"
     CDS             211..1437
                     /locus_tag="VE844_13900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_040874432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAzo13 family transposase"
                     /protein_id="HZC02398.1"
                     /translation="MVDSEIIAAVRNKYQALKPVMDEKVQRRWAACEAMTIGWGGITG
                     VSKATGISRPTIRAGIAEVQSGVPAAEEVPQRRSIRRTGGGRHCLSESDPTLLKDLQA
                     LLESSTRGDPQSPLLWNSKSTRHLADALRRQGHVVSHHTVARLLDALDYSLQGNRKTR
                     EGGSHPDRDAQFDHINQHVRAFQKRGQPVVSVDTKKKESIGDFKNAGREWHPKGEPEK
                     VRSKDFPDKALGKGIPYGVYDLSANTGWVSVGIDHDTAQFAVETLRRWWQHLGIRVYP
                     KAKELLVTADAGGSNGYRSRLWKVALQELADDIGLCISVCHFPPGTSKWNQIEHRMSC
                     HITENWRGKPLVSRAVIVNLIGSTKTGTGLTIKAELDVNTYPTGIKVSNEELTAVRIK
                     KDKFHGDWNYTLLPRT"
BASE COUNT          363 a          395 c          449 g          319 t
ORIGIN      
        1 tgacgatctg ctcggggcta aaggtggccg gtttgcctgg catccaacag ccgctcagcc
       61 agcctctcgc tcaacgcctg atcggagcgc tcctgcgcct ctacctcggc caaccgccgc
      121 gcttgtgtcc gccagcgctt accccactgg tagacggatc tgtcgcaaaa taatttttcc
      181 aatttatgag ttacggttat actgtccttc atggtggatt cagagatcat agcggcggta
      241 cgcaacaaat accaggcatt gaagccggtg atggacgaaa aagtgcagcg tcgctgggct
      301 gcttgcgaag cgatgactat tgggtggggc ggtattacag gggtttccaa ggcgacaggg
      361 atttctcgcc cgaccattcg agccgggata gctgaagtgc aaagtggcgt accggctgct
      421 gaggaagttc cgcagaggcg atcgatccgt cgcacggggg gtggccggca ctgtttgagt
      481 gagagcgacc caaccctgct gaaggatttg caggcgttat tggagtcatc cacccgtggc
      541 gatccgcagt cgcctctgct ctggaacagc aaaagtaccc gtcatctggc cgatgcgctc
      601 aggcgccaag ggcacgtggt cagtcaccac accgttgccc gattgcttga tgcgctggac
      661 tacagcctgc aaggcaatcg gaaaacgcgt gaaggcggtt ctcatcctga tcgcgatgcc
      721 caatttgacc acatcaatca acacgtgcgg gcgtttcaga aacgtggtca accggtggtc
      781 tcggttgaca ccaaaaagaa ggaatcgatt ggcgatttca agaatgccgg acgggaatgg
      841 catcccaagg gcgaacctga gaaagtgcgc agcaaggatt ttcctgacaa agcgcttggc
      901 aaaggcattc cgtatggtgt ctatgacctc agtgccaaca cgggctgggt gagtgtggga
      961 atcgatcatg atacggccca gtttgctgtc gaaacgctgc gtcgctggtg gcaacacctg
     1021 ggcattcggg tttatcccaa ggctaaagag ttgcttgtga cggcggatgc gggcggcagt
     1081 aacggctatc gctcacgatt gtggaaggtg gccttacaag agttggctga cgacatcgga
     1141 ttatgcatct ccgtgtgcca ctttccaccg ggcaccagca aatggaacca gatcgagcat
     1201 cgcatgtcct gtcatatcac cgagaactgg cgtggcaaac ccctcgtgag tcgggcggtc
     1261 attgtcaatc tcattggcag caccaaaaca gggaccggtc tgacaatcaa ggccgaactg
     1321 gatgtgaata catacccaac agggatcaaa gtctcaaatg aggaactcac cgctgttcgg
     1381 atcaaaaaag ataaattcca tggtgactgg aactacaccc tattgccaag aacatagagc
     1441 cttatagggc gtaaaatcgg aaaagttatt ttgcgacaga tccttaacac gctgccggtg
     1501 cggatccggg taggggagga gggggt
//
LOCUS       DASQSL010001355         1095 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_104620, whole genome shotgun sequence.
ACCESSION   DASQSL010001355 DASQSL010000000
VERSION     DASQSL010001355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1095
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104620"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..961)
                     /locus_tag="VE844_13905"
     CDS             complement(<1..961)
                     /locus_tag="VE844_13905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002554773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HZC02399.1"
                     /translation="MKIIRRIVPSEIALSGSIHPLLQRIYAARGVRSADEIDYSLKRL
                     HPYTALKGIETAVELLVTALKAEQRILIVADYDADGATSCALAVRGLRAMGAKQVGYV
                     VPNRFEYGYGLTPEIVAVAISYEPDLLITVDNGIASIEGVRQAKRRGLGVVITDHHLP
                     GAALPAADAIVNPNQPGCSFPSKNLAGVGVMFYVLMALRARLRAMGWFQARDLPETNL
                     AEFLDLVALGTVADVVPLDGNNRILVAQGLARMRAGYCRAGIRALIKVSGRDLSRLTA
                     SDLGFAIGPRLNAAGRLSDMSLGIECLLSEADSAALEMAKCLDE"
BASE COUNT          250 a          335 c          301 g          209 t
ORIGIN      
        1 gctcatccaa gcacttcgcc atctcaagcg cggctgaatc agcctcgctc aaaagacatt
       61 cgatgcccag cgacatatca ctgagacgtc ctgcggcatt gagcctgggg cctatagcaa
      121 acccgagatc gctcgccgtc agccgggata gatcgcgacc gctcaccttt atcagcgcac
      181 ggatgccggc tcgacaatag cctgcacgca tgcgcgcgag tccctgggcg accaagatcc
      241 ggttattgcc atcgagcggc accacatcgg cgacggtgcc aagggctacc agatccagga
      301 actccgcgag attggtctca ggtagatccc gggcttgaaa ccagcccatg gcccgcaagc
      361 gggcgcgcaa ggccatgagc acatagaaca tgaccccaac cccggcgagg tttttactcg
      421 ggaaggaaca tcctggctga ttggggttga caatcgcatc ggcggcgggg agcgctgcac
      481 cgggcagatg atgatccgtg atcactaccc caagaccgcg ccgtttggcc tgtcgcacgc
      541 cctcgatgct ggcgatgccg ttatcgacgg tgatcaagag atcaggttca tagcttatcg
      601 ccaccgcgac gatctcgggt gtcaacccat agccgtactc gaatcggttg ggaaccacat
      661 agcctacctg tttggccccc atcgcccgca aaccccggac ggccaaggcg caactggtag
      721 cgccgtcggc atcgtaatcg gccacgatca ggatccgctg ctctgcctta agtgctgtta
      781 ccaggagttc aacagctgtt tcgatcccct tgagcgctgt gtaagggtgt aagcgtttga
      841 gggaataatc gatctcatcg gcagatctca cgccgcgcgc tgcatagatg cgctggagca
      901 gaggatgaat ggaaccggag agtgctatct cggaggggac aatgcggcga atgatcttca
      961 tcgatatatc accatcttct gcccactagc aatacccgca aatccttgcc ctgtacatca
     1021 taaacaatcc ggtattcccc tacatcaaca cgccggtagg gaaagcctgc aaggagtgca
     1081 gaatcatgca gctct
//
LOCUS       DASQSL010001356         2385 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_132537, whole genome shotgun sequence.
ACCESSION   DASQSL010001356 DASQSL010000000
VERSION     DASQSL010001356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2385)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2385)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2385
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132537"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(236..1444)
                     /locus_tag="VE844_13910"
     CDS             complement(236..1444)
                     /locus_tag="VE844_13910"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006433210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HZC02400.1"
                     /translation="MTEPESKDLPLGGLRVIDASTILAGPMLATYLGDFGAEVIKVEH
                     PSGDGLRKVGREKEGKSLEWKLVSRNKKPVTLNLAHPDGQKLFHRLASTADVVITNFR
                     PRTLDKWKIKYETLSQHNPDLIMVKISGFGQEGPYRDRPGFGTLVEAMSGFAAVNGYA
                     DRGPLLPSFALADQATALLGAFATMVALFHRENSPEGTGQSIDLPIYEALMGMLGNQI
                     MEYDQLGVTPQRLGNRTQFSAPRNLYQTQDGKWVAISGTSQPIVERIFKAIGREDLIE
                     APQFKDNRTRLHNADELDAIISKWMINHTQQEAIDRFLECEATIAPVYNISDILEDPH
                     FAARGNIASVPDPDFGSVRMFNVAPKLSRTPGRIRHVGLEKGAANKAVYEGLGLSPDD
                     MRTLQKNGVI"
     gene            complement(1472..>2385)
                     /locus_tag="VE844_13915"
     CDS             complement(1472..>2385)
                     /locus_tag="VE844_13915"
                     /inference="COORDINATES: protein motif:HMM:NF028222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HZC02401.1"
                     /translation="VGRIVAMGAGAERDSVGQKLDVGDRIVWTHSDCGKCYFCTVSKQ
                     PTLCLNRRHYMYESMEKPPYLMGGFAQYGYVLPGSGRIRIPDGVESPLASLSSCAFRS
                     VINAVDQVGAISATDTVVIQGTGPLGILAIGVCKLAGAERVIAIGAPFSRLELAREFG
                     ADRTISIEEHSDPGGRILAVLEETAGLGADIVFEFSGHPAAFAEGLDFVRKGGRYMVT
                     GQLGSDSVQVQPSMITKKNLAVFGSYSGDASHYWKALRFIEEHRAHLPFHKLLTNQFG
                     LGEVTAALERMRSFQEIKPLVYPWRWG"
BASE COUNT          505 a          671 c          633 g          576 t
ORIGIN      
        1 cgcttttcac ctgggtgtac tctttgacgg tctcttctcc gatgtctcgg ccgtatcggc
       61 tggctttgta ctcccgaaag gcgaagcgta agtcgcgtta cggtaggtgt tgatccagag
      121 cttgcccgta tagggattcg cggattcgaa ctgctcgccg gacagagtct ctgtccattg
      181 gccgccgatg tagggtttgt attcctgcat tacgcatacc tctcaaaggt tgcgttcaga
      241 tgacgccatt cttctgtagg gttcgcatat catccgggct caagcccaga ccctcgtaga
      301 ccgccttatt ggccgctcct ttctcgagac ccacgtgcct gatacgaccc ggcgtccgag
      361 aaagctttgg agcaacgttg aacatccgga cactcccgaa gtctggatct gggacacttg
      421 cgatgttgcc ccgcgcggcg aagtgtgggt cttccaaaat atccgagatg ttatagacag
      481 gggcgatggt cgcttcgcac tcaaggaaac ggtctattgc ttcttgctga gtgtggttaa
      541 tcatccattt cgagataatg gcgtctaatt cgtcggcgtt atgcaaacga gtcctgttat
      601 ctttgaattg gggcgcctcg atcaagtcct ctcttccgat cgctttgaag atgcgctcca
      661 cgattggttg agaagtcccg gagatcgcga cccactttcc atcttgtgtt tggtagagat
      721 tgcgcggcgc ggaaaactgt gtacggttac ccagccgctg gggagtgacg cccagctgat
      781 cgtactccat aatctggtta cccagcatac ccatcaaggc ctcgtagatc ggcaggtcaa
      841 tgctctgccc cgtgccctca ggcgagttct cgcggtggaa taaagccacc atggtcgcga
      901 aagcgccaag gagggcggtg gcctggtccg caagagcaaa gcttggcagg agcgggccac
      961 ggtcggcgta tccattaaca gcggcaaatc cgctcatcgc ctcaactaag gttccgaagc
     1021 ctggtcgatc tcggtaagga ccttcttgac caaagcctga tattttgacc atgattaagt
     1081 ctgggttatg ctgcgacaaa gtctcgtact ttatcttcca cttgtcgagc gttctaggtc
     1141 ggaagttggt aatgaccacg tctgctgttg acgcgagacg gtggaacaac ttttgtccgt
     1201 ctgggtgggc caggttaagc gtaaccggtt ttttgttccg cgataccagt ttccattcta
     1261 gagacttgcc ttctttttcc ctgcctacct tgcggagacc atctccactc gggtgttcga
     1321 ctttgatgac ttcagccccg aaatctccta aatatgttgc cagcataggt ccggcgagaa
     1381 tggtagaggc gtctatgact ctgagtccac ctagaggcag atctttgctc tcgggttcag
     1441 tcatgagatt ggtctccccc ttcatccgaa gctaccccca cctccatggg tagacgagtg
     1501 gtttaatctc ctgaaaagac ctcatccgct ccagagcagc ggtgacctcc cctaaaccaa
     1561 attgattcgt aagcagtttg tgaaaaggca aatgcgctcg gtgctcctca ataaaccgta
     1621 gcgctttcca gtaatggctc gcgtcgcccg agtaagaacc gaaaaccgcc agattctttt
     1681 tggtgatcat agagggttgc acctgtacgc tgtcgcttcc gagctgtccc gtcaccatgt
     1741 accggccccc tttacgaaca aaatccagtc cctcggcaaa agccgccgga tgacccgaga
     1801 actcgaacac aatatcggcg ccaaggccgg cggtctcctc gagcacggct aggatgcggc
     1861 ccccaggatc gctatgctcc tcgatagaga tagtcctgtc agcgccaaat tcccgcgcga
     1921 gctccaatcg actgaatggg gcaccgatgg caataacacg ctcggcccct gcgagtttgc
     1981 atactccgat agccagaatt cccagaggtc ctgtaccttg tattacgacc gtgtccgtgg
     2041 cgctaatagc tccgacttga tcgacagcat tgataacaga tcggaacgcg cagctactaa
     2101 ggctagccag cgggctctca acgccgtccg gaattcggat gcggccagag ccggggagta
     2161 cgtagccgta ttgagcgaag cctcccatta ggtagggagg cttttccatc gactcgtaca
     2221 tgtagtgacg tcggttaagg caaagagtgg gttgcttact gaccgtgcag aagtaacatt
     2281 ttccacagtc ggagtgggtc cagactatac gatcgccgac gtctagtttc tgccctaccg
     2341 agtcacgctc ggcgccagcg cccatagcga cgattcgacc gacca
//
LOCUS       DASQSL010001357         3830 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_24384, whole genome shotgun sequence.
ACCESSION   DASQSL010001357 DASQSL010000000
VERSION     DASQSL010001357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3830)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3830)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3830
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24384"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..819)
                     /gene="ftsZ"
                     /locus_tag="VE844_13920"
     CDS             complement(<1..819)
                     /gene="ftsZ"
                     /locus_tag="VE844_13920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017378451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HZC02402.1"
                     /translation="MFELVNMHRAGAVIKVVGVGGGGSNAVQHMLNANIEGVEFVCAN
                     TDAQALGGVSARTVIQLGNNVTHGLGAGADPEKGRQAALEDRDRIMDVFEGADMVFIT
                     AGMGGGTGTGAGPVVAQVAKEMGILTVAVVTRPFSFEGRKRAEVAGEGIRHISQYVDS
                     LITIPNDKLLSVLGRDISLLNAFKAANDVLLGAVQGIAELITSPGLINVDFADVRTVM
                     AEMGMAMMGSGLGKGQNRARIAAEAAVASPLLEDINLAGAKGMLVNITASMDITL"
     gene            complement(899..2134)
                     /gene="ftsA"
                     /locus_tag="VE844_13925"
     CDS             complement(899..2134)
                     /gene="ftsA"
                     /locus_tag="VE844_13925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009726136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HZC02403.1"
                     /translation="MIKRPDRDLIVGLDIGTSKVVAIVGEVADNEPIEVIGIGFHPAR
                     GLKKGVVVNIESTVQSIQRAVEEAELMAGCQIHSVYAGIAGSHIHSLNSHGNVAIRNN
                     EVTGGDVERVMDAARAVAVPADQRILHVLPQEFVIDNQEGIRDPIGMSGVRLEAKVHL
                     VTGAVSAAQNIVKCIRRCGLEVDDIVLQQLASSQAVLTEDEKEMGVCLADIGGGTTDI
                     AVFVNGAIHHTAVIPIAGDQVTNDIAVALRTSTHHAEEIKLKYACALTDLASPEDTIE
                     VFSVSERPPKRLTRQNLAEVVEPRYEELFGLIQAELKRSGHEELMAAGMVLTGGSTKM
                     EGVIELAEEVFHMPVRLGVPEHVTGLVEVVKNPIYATGVGLLLYGLKNSQPNGRSLRP
                     ERGFSGIWQRMKNWFHGNF"
     gene            complement(2161..2925)
                     /locus_tag="VE844_13930"
     CDS             complement(2161..2925)
                     /locus_tag="VE844_13930"
                     /inference="COORDINATES: protein motif:HMM:NF015739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HZC02404.1"
                     /translation="MGITRHQHQRITQGQLGQGNYWLVGIGGGFVLVGTLALVTWGAV
                     KLTDPTTLPIRAVHIQGEFQQLRPEVLKVLVAQAIKGGFFTTEVDRIRGALLREPWIR
                     EALVRRIWPETLEVTVHEQRAVARWGDKGLLNPEGTVFSPPPESYPKGLVELHGPLGT
                     EAQVLSRFYAINQRLLDRGWKVARLSLSPRRAWSFELVHGPRVIVGRTDFERRIERFV
                     ANFHRVVGDRGDMTAQVDLRYTNGFTVKTRSYGRSG"
     gene            complement(2938..>3830)
                     /locus_tag="VE844_13935"
     CDS             complement(2938..>3830)
                     /locus_tag="VE844_13935"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HZC02405.1"
                     /translation="RPISLESGTAVLAALKRKGIEAQALDLAEPEVLNTLQQGGFDRV
                     FIALHGRGGEDGVIQGALETMGIPYTGSGVLGSALAMDKSRAKRIWLSMGVPTPSFIE
                     LAAGFDVEVVVASLGLPIMVKPAQEGSSLGASKVIAGEHMSEAWRMASQYDPRVIAER
                     WISGKEYTVALLDGEALPLIRLETPRVFYDYEAKYSDDRTRYICPCGLPAVRERELQA
                     LALKGFNALGAQGWGRVDMLVDERDRPWLIEVNTVPGMTGHSLVPMAARAVGISFDDL
                     VVRILKTSFKRENLGMYRVN"
BASE COUNT          818 a         1300 c          897 g          815 t
ORIGIN      
        1 caaggtgata tccatgctcg ccgtgatatt caccagcata cctttagcac cggccagatt
       61 gatatcctcg agcagggggc tcgcaaccgc tgcctcggcg gcgatgcgag cacggttctg
      121 gcccttaccc aagcccgatc ccatcatcgc catacccatc tcggccatca ccgtgcggac
      181 atcggcaaaa tccacattga tgagaccggg cgaggtgatc agctcggcga tcccctgaac
      241 cgctccaagc aggacatcat tggctgcctt aaacgcattc aacaggctga tatcccgtcc
      301 gaggacgctc aaaagcttgt cgttcggtat cgtaatcaag gaatccacat attggcttat
      361 atgccggatc ccctcgcctg ccacctcggc gcgtttccta ccctcaaagc tgaatggccg
      421 ggtcaccacc gctaccgtga gaatacccat ctccttggct acctgagcta ccacgggccc
      481 agctccggta cccgtacctc cgcccatgcc tgcagtaatg aacaccatat cggctccctc
      541 gaacacatcc atgatccgat cccgatcttc gagggcggcc tggcgtcctt tctccggatc
      601 cgccccagca ccgagtccgt gggtaacatt attacccagt tggatcacgg tgcgcgccga
      661 cacaccgccg agcgcctggg catcggtatt ggcgcaaaca aactcgacgc cctcgatatt
      721 ggcgttcagc atatgctgca cggcattact accaccgccg cctaccccga ccaccttaat
      781 cacagcacct gctctgtgca tattcactag ctcaaacata gacctaccct cctcgtctgc
      841 tggaatcctt aattgtgatt gatgcttgat cagctaaagc cgtcttttca cccatttttt
      901 agaaattgcc gtgaaaccaa ttcttcatac gctgccatat gccgctaaaa ccacgttctg
      961 ggcgcaatga tcgcccattg ggctgactgt tcttcagccc atacaacaac agccccactc
     1021 ccgtggcata aatggggttt ttaaccacct cgaccaatcc cgttacgtgc tcgggcacac
     1081 ccaagcgcac gggcatgtgg aaaacctcct cggcgagttc gataacccct tccatcttgg
     1141 tgctgccacc ggtcaacacc atccccgccg ccataagctc ttcatgaccg ctgcgtttca
     1201 actccgcctg gatcaatcca aacaactctt cataccgtgg ttcgacaacc tcggccaagt
     1261 tctggcgcgt gagccgcttc ggcggccgct cactgacgct gaacacctca atggtatcct
     1321 cggggctcgc cagatcggtc aaagcacacg catatttgag cttgatctcc tcggcatgat
     1381 gggtggatgt cctgagcgcc accgcaatat cgttggtcac ttggtcaccg gcgatcggta
     1441 tcaccgccgt atgatggatc gcaccattga caaataccgc aatatccgtc gtacccccgc
     1501 cgatatcggc aagacatacg cccatctcct tctcgtcctc ggtcaagacc gcctggcttg
     1561 aggcaagctg ctgcagaaca atatcgtcga cctcaagtcc gcagcggcgt atacacttga
     1621 caatattctg ggcagcactc accgcccccg tcaccaggtg taccttagcc tcgagtcgga
     1681 cccctgacat cccaatcgga tcgcggatcc cttcctgatt atcgataaca aattcctggg
     1741 gcagtacatg caggatccgt tgatcggcag gtacggcgac ggccctcgcc gcatccatga
     1801 cacgctcgac atccccgcca gtgacctcat tgttacggat cgccacgttc ccatgagagt
     1861 tcaagctatg gatatggctg ccggcaatcc cggcatacac cgaatggatc tggcagccag
     1921 ccatcagttc ggcctcttcc accgcccttt ggatcgactg cacggtcgat tcgatattga
     1981 caaccacacc cttcttcagc ccccgggcag ggtggaaacc gatgccgata acctcgatgg
     2041 gctcattatc ggcgacttcc ccgacgatag cgactacctt ggaggtgccg atgtcgagac
     2101 ctacgatcag atcccggtca ggccttttta tcatgctcgg ctctccctct cagggcctgc
     2161 tcacccgctt cggccatatg atcgtgtttt cactgtaaaa ccattggtgt aacgcagatc
     2221 cacttgagcc gtcatatccc ctctatcgcc taccacccga tgaaagttcg ctacaaaacg
     2281 ctcgatccgg cgctcaaaat cggtacgccc cacaatcacc cggggaccat gaactaactc
     2341 aaaactccag gcacgtcttg ggctcagact caagcgggcc actttccagc cccgatctag
     2401 caagcgctgg ttgatcgcgt aaaatcggct gagcacctgt gcttcagtac ccaggggacc
     2461 gtgcagttcg accaggcctt tgggatagct ttccggtggc ggactaaata cggtcccttc
     2521 aggattcaac aatcccttat ctccccaccg tgccacggcg cgctgttcat gcaccgtcac
     2581 ctcaagtgtt tcgggccaga tccggcgtac taaagcctcc ctgatccagg gctcccgcaa
     2641 taaggccccc cggatccgat cgacctcggt agtgaaaaat ccgcctttga tcgcttgcgc
     2701 cacgagtacc ttcaaaacct caggcctaag ctgctggaac tcgccctgga tatgcactgc
     2761 tctgatcggt agggtagtgg gatcggtgag tttcaccgca ccccacgtca ctaaggcgag
     2821 ggtgcctacc agcacgaagc ccccccctat ccccactagc cagtaattgc cctgccctaa
     2881 ctggccttgg gtgatccgtt gatgttgatg cctggttatt cccaccttat cgcccgctca
     2941 atttacccga tacatcccta gattctctct tttaaagctc gtcttgagga tacgcacgac
     3001 cagatcatcg aagcttatcc ccaccgccct ggccgccatc ggcaccaaac tgtggccggt
     3061 catcccggga accgtattga cctcgatcag ccagggccga tcccgctcat cgaccagcat
     3121 atcgacccgc ccccaaccct gcgcccctaa ggcattaaaa cccttgaggg caagtgcctg
     3181 taactcccgc tcccggaccg ccggcaaccc gcaaggacag atatagcggg tccgatcatc
     3241 ggagtatttc gcctcatagt catagaagac acgaggcgtt tctaaacgga tcagcggcag
     3301 ggcctcgcca tcgagcaaag ccaccgtata ttccttaccg ctgatccagc gctcggcgat
     3361 cacgcgcggg tcatactgcg aggccatgcg ccaggcctct gacatgtgtt ccccggcgat
     3421 caccttgctc gcccccaggc tcgatccctc ctgcgccggt ttgaccatga tcggtagccc
     3481 taaggacgct accaccactt ccacatcgaa accggcagcc agctcaataa aagagggggt
     3541 cggcacgccc atgctgagcc agatccgctt ggctctagac ttgtccatcg ccaaggctga
     3601 gcccaagacg ccactccccg tataggggat gcccatcgtc tcaagcgccc cttgaataac
     3661 cccatcctcc cctccacggc catgcagcgc gataaaaacg cggtcaaagc ccccttgctg
     3721 gagtgtgttc aatacctctg gctcggctaa atcgagggct tgagcctcta tgcccttgcg
     3781 cttgagcgct gccaagacgg cagtgccgct ttcaagcgag attgggcgtt
//
LOCUS       DASQSL010001358         1816 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_147048, whole genome shotgun sequence.
ACCESSION   DASQSL010001358 DASQSL010000000
VERSION     DASQSL010001358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147048"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..411)
                     /locus_tag="VE844_13940"
     CDS             complement(<1..411)
                     /locus_tag="VE844_13940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013014150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HZC02406.1"
                     /translation="MNTLIQIAYFATAILFILGLKRMSSPVTARAGIVWAGMGMAVAT
                     AITLFWPGMHNYLLMLTAIAIGSGLAWYFAKRVPMTAMPQMIALYNGMGGGAAAAIAA
                     GELIQTGVQHGLMVTLLAVLGGLIGTVSFSGSLVA"
     gene            complement(416..712)
                     /locus_tag="VE844_13945"
     CDS             complement(416..712)
                     /locus_tag="VE844_13945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018717604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P) transhydrogenase subunit alpha"
                     /protein_id="HZC02407.1"
                     /translation="MTIEGFVALYIFMLAAFTGYEVISRVPVILHTPLMSGSNFVHGI
                     VLVGAMVALGKADPESPVQLILGFFGVILAAGNAVGGYAVTERMLEMFKSSKGK"
     gene            complement(709..>1816)
                     /locus_tag="VE844_13950"
     CDS             complement(709..>1816)
                     /locus_tag="VE844_13950"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018717605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008746 - NAD(P)+ transhydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HZC02408.1"
                     /translation="HPGEKRIAIVPEVVGRLQKLGVEVLIEEGAGIGSHYPDPAFQEA
                     GAVLIHGQEQLLGEADLVLRVQPPTVESINLQREDSLAIGFMNPSQNPESIKAMCARR
                     ITSLALELLPRVTRAQAMDALTSQASVAGYKAALMAADHLGKFLPMLTTPTGTIRPAK
                     VLVIGAGVAGLQAIATARRLGAMVEAYDVRTATKEQVESLGAKFLQASIKAEAEGGYA
                     RELTAEEKQLQQEMLAKYIAQADAVIATASIPGQTAPRIITKEMVESMRPGSVIIDLA
                     AESGGNCELTQVGKSVRRKDVEVYGPINVPSMLPVHASEMYAKNLFNLVVLMIKDSQL
                     APDWEDEVLRESTLTRDGEIKHAPTRQLIEGEKQ"
BASE COUNT          382 a          585 c          474 g          375 t
ORIGIN      
        1 cgcgaccagt gagcccgaga acgacaccgt accgatcagt cctccgagta cggccaatag
       61 agtgaccatc aaaccgtgct ggacccctgt ttggatgagt tcccccgccg cgatcgcggc
      121 cgcagccccg ccgcccatgc cattgtacag agcaatcatc tgcggcatcg ccgtcattgg
      181 tacccgtttg gcgaaatacc aggccagccc cgagcctatc gcaatggccg tcagcatcaa
      241 cagataatta tgcatgcccg gccagaacag ggtgatggcg gtagcgaccg ccatgcccat
      301 gcctgcccaa acgatgccgg cccgcgctgt cacgggcgag ctcatccgct tcaatcccag
      361 gataaatagg atagcggtgg cgaaataagc gatttgaatc aaggtattca tgggcttact
      421 tccccttgct gctcttgaac atctcgagca tccgctcggt caccgcatat cccccgaccg
      481 cattgccggc agccaatatc accccaaaaa aaccgaggat cagctgtact gggctttccg
      541 gatccgcctt ccccaacgcc accatggcgc ccaccagcac gatcccatgg acaaagtttg
      601 aacccgacat gagcggcgtg tgcaggatca ccggcactcg gctgatgacc tcatagcccg
      661 taaaggccgc aagcataaag atgtataatg cgacaaaccc ttcaattgtc attgtttttc
      721 tccttcaata agctggcgcg ttggcgcgtg ttttatctct ccatcccggg tcaaggtgct
      781 ctcccgcaat acctcgtcct cccaatcggg ggcgagctgg ctatccttaa tcattaacac
      841 cactagatta aacagattct tagcatacat ctcgctggca tggactggca gcatgctggg
      901 tacattgatc ggaccgtaga cctcgacatc cttacgacgc accgacttgc cgacctgggt
      961 aagttcgcaa ttgccaccgc tctcagccgc cagatcaatg atcacagagc ccggacgcat
     1021 ggactcgacc atctccttgg tgatgatccg gggcgctgtc tggccgggaa tggaggccgt
     1081 agcgatcact gcatcggcct gggcaatata tttggcaagc atctcctgtt ggagctgttt
     1141 ttcttccgcg gtgagctcac gcgcatagcc gccctcagcc tcggccttga tactggcctg
     1201 aagaaacttg gccccgagcg actccacctg ttccttggtg gccgtgcgca catcgtaggc
     1261 ctcaaccata gcccccaggc gccgcgcggt agcgatcgct tgtaagccgg caacgcccgc
     1321 tccaatcacc aggaccttgg caggccggat agtgcccgta ggcgtggtca gcataggcaa
     1381 gaatttgccc agatgatcag cggccatgag tgctgcttta taccctgcca cggaagcctg
     1441 tgaggtcaat gcgtccatag cctgcgcccg ggtgacccgg ggcaggagct cgagcgcgag
     1501 gctcgtgatc cttctcgcac acattgcttt gatcgactct ggattctgcg acgggttcat
     1561 aaacccgatc gctaggctgt cctcccgttg gaggttaata gattccacag tcggaggctg
     1621 tacccggagc acaaggtcgg cctcgccgag aagctgctct tggccgtgga tcagaaccgc
     1681 ccccgcctct tgaaacgccg gatcggggta gtgggatcca atccccgcac cctcttcgat
     1741 cagcacctca accccaagct tctgcaatcg tcccacgact tctggcacga tagcgatacg
     1801 tttctcccct ggatgg
//
LOCUS       DASQSL010001359         2310 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_170007, whole genome shotgun sequence.
ACCESSION   DASQSL010001359 DASQSL010000000
VERSION     DASQSL010001359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2310
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170007"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            71..1363
                     /locus_tag="VE844_13955"
     CDS             71..1363
                     /locus_tag="VE844_13955"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017365422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HZC02409.1"
                     /translation="MAAVRITGGRVIDPAARLDAVVDIYITEGRIQALGLAPEGFRAD
                     RIVDARGRIVCPGLVDLSARLREPGYEHKATIASETRAAASAGITTLCCPPDTQPVID
                     TPAVVELIHRRAEQAGWARVVCLGALTQGLKDEQLAELFALKQIGCIGVSNALAPIAN
                     TEIVRRAMEYAAICDLRVFLHPEDPWLCRTGQIHEGAVSAQLGLPAVPEITETIALAR
                     DLLLIEQTGVRAHFCRLSTARAVRMVAEAQARGLPVSADVNVHQLHLTDKDVGCYNSL
                     CHVRPPLRDQGDREGLREGLAQGVIRAICSDHQPHDRDAKIAPFSATEPGISALETLL
                     PLTLKLVDEGTFGLHAALAALTHQPAQILGIEAGSLKVGKPADICIFDPALSWTLTED
                     KLISRGKNTPFLGRQFKGKVTHTLLGGALIYSFDTSSL"
     gene            1360..2238
                     /locus_tag="VE844_13960"
     CDS             1360..2238
                     /locus_tag="VE844_13960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002814007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase electron transfer
                     subunit"
                     /protein_id="HZC02410.1"
                     /translation="MNSSSNRNTLFLEEATILAQETHPGNQYVLRLQAPQTALHAEPG
                     HFVFLRCDACLPMRRPMSIMRANKTSGWIDILYTIHGFGTELLSQKRSGNIINLLGPI
                     GTPFKLEGYRRRPLLIGGGVGIPPMVFLAEHMKKAAATLAPLALMGSEIPFPFKPRPS
                     RFMISGIPASVIAAMPLLEDWGLPSRLASLKGFPGCFEGFVTDLARGWLDAQGPEHRL
                     EVEIFACGPTPMLEAVARLAKDYELPCQISLEEYMACAVGGCAGCAVQVLTQTGPVMK
                     RICVDGPVFESAAVVF"
BASE COUNT          435 a          705 c          682 g          488 t
ORIGIN      
        1 ggaagagctc ctcgctactt cgataagccc tcgcaaaccc tcctctcacc catgggactg
       61 atctattagc atggcggcgg tccggatcac cggtgggcgc gttatcgatc ccgccgctcg
      121 gctcgatgcg gtggtggata tctatattac cgaaggccgt atccaggccc tgggcctcgc
      181 gccagaaggc tttcgggcag accgcatcgt cgatgcgcgg ggtcgaatcg tctgcccagg
      241 tctggtagat ctcagcgccc ggttacgcga gccgggctat gagcacaagg ccaccatcgc
      301 gagcgaaacg cgcgctgcgg caagcgctgg gatcaccacc ctgtgctgcc cacccgatac
      361 ccaaccggtg atcgatacgc ctgctgtggt cgagcttata catcggcggg ccgaacaagc
      421 cggttgggca cgggtagtgt gtttaggcgc ccttacccaa ggccttaagg acgagcagtt
      481 ggccgaacta ttcgccttaa aacagatcgg ctgtatcggg gtcagcaacg ccctcgctcc
      541 tatcgccaat accgagatcg tgcgccgggc catggagtat gcggccatct gtgatctgcg
      601 ggtgttcctc catcccgagg acccctggct atgccgtacg ggccagatcc acgagggtgc
      661 tgtcagcgcc cagttaggat tgccggccgt gcccgaaatc actgagacta tagccttggc
      721 ccgcgatctg ctcctcatcg aacaaaccgg cgtgcgcgcc catttctgcc gcctttccac
      781 agcgcgcgcc gtacgcatgg tggcggaggc ccaggcgcgt ggactccctg tgagcgccga
      841 tgtgaacgtc catcagctac atctaacgga taaggatgtc ggttgttaca atagcctttg
      901 ccatgtacgc ccgcctttgc gcgaccaagg cgatcgagag ggcttgcgcg agggcctcgc
      961 gcaaggcgtt attagggcta tctgctccga ccatcaaccg catgatcggg atgccaagat
     1021 cgctcctttc agtgccaccg agcccgggat ctcggcgctc gagacgctcc tgccgctcac
     1081 ccttaagctc gtcgatgagg ggacgttcgg ccttcatgcg gcgcttgcgg cgcttaccca
     1141 tcaaccggcg cagatcctgg ggattgaggc aggcagcctt aaggtaggga agccggccga
     1201 tatctgcatc tttgatccgg cgctcagctg gaccctgact gaagataaac tcataagccg
     1261 cggcaagaat accccgtttc taggccggca attcaaaggc aaggtgacgc ataccttgct
     1321 cggtggcgcg ttgatctata gcttcgatac gagctcacta tgaatagctc ctcaaaccgg
     1381 aacaccctct tcctggagga agccacgatc ctggctcaag agacccatcc ggggaatcaa
     1441 tacgttcttc gcctccaggc cccgcaaacc gcactgcatg ccgagcccgg ccattttgtc
     1501 tttctccgct gcgacgcttg cctgccgatg cggcggccca tgtcgatcat gcgggcgaat
     1561 aaaacgtccg gctggatcga tatcctctac acgatccacg ggtttggcac tgaactgctg
     1621 tcccagaagc gcagtgggaa tataatcaat ctcttaggtc ccatcggtac gccttttaaa
     1681 ctcgaaggct atcggcgccg gccgttgctt atcggcggtg gcgtcggcat cccgccgatg
     1741 gtgtttctgg ccgagcacat gaaaaaagcg gcggctacct tggcgccgct ggccctgatg
     1801 ggatcggaga tcccttttcc gtttaaaccc cggccttcgc ggttcatgat ctccgggatc
     1861 ccggcgagcg tgatagcagc catgccctta ttggaagact ggggactgcc gagccggctt
     1921 gcaagtctta aaggctttcc ggggtgcttt gaaggctttg taaccgatct cgcccggggc
     1981 tggctcgatg cccaaggtcc cgaacaccgg cttgaagtcg agatcttcgc ctgtggcccg
     2041 acaccgatgc tcgaagcagt cgctcggctg gccaaagact atgaacttcc ctgtcagatc
     2101 tcccttgaag agtacatggc ttgcgcggtc ggtgggtgcg cgggctgtgc tgtccaggtg
     2161 ctgacccaga ccggcccagt gatgaagcgg atctgcgtgg atggtccggt gtttgagtcg
     2221 gccgcggtgg tgttctagta ctctgtcaac attaatcttg atgagagtgc tcaccagttc
     2281 caggcgctgg ttgcattgga gatcgttaag
//
LOCUS       DASQSL010001360         2695 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_132558, whole genome shotgun sequence.
ACCESSION   DASQSL010001360 DASQSL010000000
VERSION     DASQSL010001360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2695
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132558"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..168
                     /locus_tag="VE844_13965"
     CDS             <1..168
                     /locus_tag="VE844_13965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017772602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HZC02411.1"
                     /translation="EQRLQAGEGKEMPVRFFVNPDLPMDVKTLTLSYTFFNAGTPSLA
                     FLLEGEDRGGG"
     gene            206..1081
                     /locus_tag="VE844_13970"
     CDS             206..1081
                     /locus_tag="VE844_13970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011331133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HZC02412.1"
                     /translation="MTESHSGYYLPEPSPWPLIGSVGLFFLFGGLALALNGVGIGSLI
                     MVVGFASVLIMVFGWFSTVIQESESGRYNSQVDKSFRWGMGWFIFSEVMFFAAFFGAL
                     FYARMYSVPWLGGEGAKVSTHSLLWPAFEALWPLLKLPDPKGFTEAAEPMGAWGLPAI
                     NTLLLLSSGATVTWAHWGLREDNRRQLIQGLILTIALGVLFLVFQGIEYSHAYSELNL
                     RLTSGIYGTTFFLLTGFHGAHVTLGVIMLSVILLRSIKGHFTPDRHFAFEGVAWYWHF
                     VDVVWLALFVSVYWL"
     gene            complement(1090..1971)
                     /gene="ttcA"
                     /locus_tag="VE844_13975"
     CDS             complement(1090..1971)
                     /gene="ttcA"
                     /locus_tag="VE844_13975"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012487682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HZC02413.1"
                     /translation="MSSMHATVKQHPLELNKLHKRLRRNVGRAIEDFNMIEEGDRVMV
                     CLSGGKDSYSLLDILLSLRRNAPVRFELVAVNLDQKQPGFPEHVLPDYLRQLAIPFHI
                     LEQDTYSVVKRVIPEGKTLCGLCSRLRRGILYTFAKEQGMTKIALGHHREDIIETLFL
                     NLFFGGKLKAMPPKLLSDDGSHVVIRPLAYCKEEDIAQYAAWRNFPIIPCKLCGSQDN
                     LQRAVIKNMLKSWEREFPGRLESIFNSIRNIAPSHLADRRLFDFAGLGSTNYTGEQGS
                     RPSWLLPGEDRLAGALE"
     gene            2256..>2695
                     /locus_tag="VE844_13980"
     CDS             2256..>2695
                     /locus_tag="VE844_13980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkene reductase"
                     /protein_id="HZC02414.1"
                     /translation="MPAERLFQPVKLGRYHLPHRIVMAPLTRSRARQPGNVPSPLNAC
                     YYAQRASAALIITEATQVSQQGQGYAWTPGIHSREQVEGWRLVTALVHTAAGLIFMRL
                     WHVGRISHPALQPDGLLPVAPSAIKPSGQAFIENENGEGELVPFV"
BASE COUNT          553 a          740 c          747 g          655 t
ORIGIN      
        1 gagcaacgcc tgcaagcggg cgaaggcaag gagatgccgg tacgcttttt tgtcaatccg
       61 gatctaccga tggacgtcaa gacccttact ttgtcctata cgttcttcaa cgccggcacc
      121 ccctccctcg cctttctcct agaaggggag gataggggtg ggggttaatc aaaacacgat
      181 acgctcacaa caaggggaag aacctatgac cgaatcacat tccggctatt acctgccaga
      241 gccaagcccc tggccgttga taggttcggt tgggctgttt tttctatttg gtggattggc
      301 gcttgcgctc aatggggttg gcataggctc actgattatg gtggtgggct ttgctagtgt
      361 gctcatcatg gtattcggct ggtttagcac cgtgatccaa gagagtgaaa gcggccgtta
      421 caattcccaa gtggataaaa gctttcgctg ggggatgggt tggttcatct tctccgaggt
      481 gatgttcttc gcggcttttt ttggtgcctt gttctatgcc cggatgtatt cggtgccctg
      541 gttaggcgga gaaggggcta aggtttcaac gcatagttta ctgtggcccg ccttcgaggc
      601 gctgtggccg ctcttaaaat tgccggatcc caaaggcttt accgaggcag cggaacctat
      661 gggcgcatgg ggactccctg ccatcaatac cctcctgtta ctctcgagcg gcgcgacagt
      721 cacctgggcg cattggggtt tgagagaaga taatcgccgg cagcttatcc agggactgat
      781 cttgactata gccctggggg tgctgttttt agtcttccaa gggattgagt attcccatgc
      841 ttattcggag cttaacctca ggctgacttc gggcatttac ggcacgacct tctttctgct
      901 tacaggcttc catggggcgc acgtgacctt gggcgtgatc atgctgagcg ttatcttact
      961 gcgttcgatc aaagggcatt tcacgcccga tcgtcatttt gcctttgaag gtgtagcctg
     1021 gtactggcat ttcgtcgatg tcgtgtggct ggccctgttc gtctccgtct attggcttta
     1081 aaagctacct tactccaacg ccccggcaag cctatcctcg ccgggtaata gccagcttgg
     1141 ccggctcccc tgttcacccg tgtagtttgt tgaccccaac cccgcaaagt caaaaagacg
     1201 ccgatccgcc agatgggagg gcgctatatt gcggatgctg ttgaagatac tctcaagccg
     1261 cccggggaat tccctctccc aggatttaag catgttcttg atcacggccc gctggaggtt
     1321 atcttgagaa ccgcagagct tacaggggat gatggggaaa ttacgccatg cggcgtactg
     1381 ggcgatgtct tcctccttgc agtaagcgag cgggcggatc accacatggc tcccgtcatc
     1441 gctcaagagt ttaggtggca tggccttcag tttgccgcca aagaacagat tcagaaacaa
     1501 ggtctcgatg atgtcctcac ggtgatggcc aagcgcgatc ttggtcattc cctgctcttt
     1561 ggcgaaggta tacaagatcc cgcgccgcag gcgcgagcaa agcccgcata gggtcttgcc
     1621 ctcggggatc acccgcttga ccacgctata ggtatcctgc tcaaggatat gaaacggtat
     1681 ggccaattgc cgcagataat cgggcaacac atgctccggg aagccgggct gtttttggtc
     1741 gaggttgacg gcaaccagct caaatcttac cggggcgtta cggcgaaggc tcaagaggat
     1801 atcgagcagg ctataggagt ccttgccacc ggacaggcat accatcaccc gatccccctc
     1861 ttcgatcatg ttgaaatctt caatggcgcg tccaacattg cgccgcaggc gtttatggag
     1921 cttgttgagc tcaagcggat gttgtttgac agtggcgtgc atactagaca ttcaaataat
     1981 tgtaataatt acaatggcat ggattattac acgattaccc tctatattct gctcttgtct
     2041 attagagata tcacctaaag gccgcagacg atcctgaggg gtgcgccgta tacatgctca
     2101 tcgcacgcga gttcgccagg caattggatc gatgtccatg ttacggcatt gtgaattcac
     2161 ttttatgata cagtaaaact agttgggtat aatcagagga aaacatcatg tccgtgtcca
     2221 cgacatccat cgcacaggcc gtcggtgcgc ggcacatgcc cgcggaacgg ctgtttcagc
     2281 ccgtcaagct ggggcgttac cacctgcccc accggatagt catggcgccg ttgactcgct
     2341 cgcgcgcccg ccagccgggc aatgttccgt cccctctcaa tgcctgctat tacgcgcaac
     2401 gggcctcggc cgctctcatc attactgagg caacccaggt atctcaacag ggacagggct
     2461 acgcctggac gccgggtatt cacagccgcg aacaggttga gggctggcga ctggtcaccg
     2521 ccctggtgca cacagccgcc ggtttgatct tcatgcgact ctggcacgtc ggacgcatct
     2581 cccatccggc actccagccc gatggcttgc tcccggtcgc gccctcggcc atcaagccca
     2641 gcggccaagc gtttatcgag aacgaaaacg gcgagggcga gctggttccg ttcgt
//
LOCUS       DASQSL010001361         2585 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_115470, whole genome shotgun sequence.
ACCESSION   DASQSL010001361 DASQSL010000000
VERSION     DASQSL010001361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2585)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2585)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2585
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115470"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..834
                     /gene="argF"
                     /locus_tag="VE844_13985"
     CDS             <1..834
                     /gene="argF"
                     /locus_tag="VE844_13985"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011330963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HZC02415.1"
                     /translation="IELKAIHRSGEPFEPLKSRVLGMVFEKSSTRTRVSFETAMIHLG
                     GQAIFLSPNDTQLGRGEPLEDTARVLSRMVDILLVRTFEHERIMRFAACSEVPVINGL
                     TDEHHPCQLLADMQTYYERRGPIKGKTVSWIGDGNNMCNSYIEAAHRYGFQLHIACPP
                     GYLPSLLLLAEIDAGVEVFEDPSKAIRGADLVVTDVWASMGQEGEAEARRAVFMPYQV
                     NERLMALAEPEALFMHCLPAHRGEEVSAGVIDSPQSVVWDEAENRLSSQKALLEFLLA
                     K"
     gene            873..1637
                     /gene="surE"
                     /locus_tag="VE844_13990"
     CDS             873..1637
                     /gene="surE"
                     /locus_tag="VE844_13990"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004999153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HZC02416.1"
                     /translation="MFFLVSNDDGYRAPGIVQLAQALAELGEVVVVAPDRNCSGASNS
                     LTLDTPIRASKADNGFIVVDGTPTDCVHLAITGLLERMPDMVVAGVNEGPNLGDDVLY
                     SGTVAAAVEGRFLGLPAMAVSLAGDRVVHYETAARVARLLVQEMGARPLSVDTILNVN
                     VPDRPWGQLAGFEATRLGRRHKSEPVVQTLDPRGRPIYWVGPPGPEEDAGPGTDFHAV
                     KTGHVSITPLQVDLTRYTALETVSHWLTGMKLDEKI"
     gene            1700..2506
                     /locus_tag="VE844_13995"
     CDS             1700..2506
                     /locus_tag="VE844_13995"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HZC02417.1"
                     /translation="MGLLHNKVGYGVWVIILMLVSACGGFGLAPVTTYEAGKGHAAQN
                     PPHSRSIPVYHSVKWGDTLISIAWRYHKDYRDLARWNGIAKPYRIYKGQRLRLAPPLR
                     SERSSAKGVRRPQKTAATLARAPLRKTKLPGDQGRSTGIEWQWPAQGKLLRSGTVRAK
                     QGLEILGWEGQPIRAAAPGTVIYSGDGLRGYGKLIIIKHSPIYLSAYAHNSRLLVREG
                     ATVFAGQQIAEMGHTGTMHVKLYFEIRQNGKPVPPLHYLPKRALDLSGLR"
BASE COUNT          562 a          660 c          796 g          567 t
ORIGIN      
        1 atcgaactta aggccattca ccgatccggg gaacctttcg aacctttaaa gagccgggtt
       61 cttggcatgg tgtttgagaa gtcctcaaca cggacccggg tatcctttga aaccgctatg
      121 atccatttgg gaggacaggc aatcttttta tcgcccaatg acactcaatt gggtcggggt
      181 gaacccctgg aggataccgc acgagtcctg tcacggatgg tcgatatcct cctggttcgt
      241 accttcgagc atgagcggat catgcgtttt gcagcctgct ccgaggtccc agtcatcaat
      301 ggtctgactg acgagcatca tccctgtcaa ctccttgccg atatgcagac ctattacgaa
      361 cgccgcggcc ctattaaagg taaaacggtg tcgtggattg gcgacgggaa caatatgtgc
      421 aactcctaca tcgaggcggc ccaccggtat gggttccaac tgcatatcgc ttgcccaccc
      481 gggtatctac ctagcctcct cctactggcc gagattgacg ccggtgtaga ggtcttcgaa
      541 gatccgagca aagcgatccg gggggcggat ctcgtagtta ccgatgtgtg ggccagtatg
      601 ggacaagaag gggaagccga ggcgcggcga gccgtattca tgccttacca agtaaacgag
      661 cggcttatgg ccctggctga gcccgaggcc ctgtttatgc attgtctgcc ggcccatcgc
      721 ggcgaagagg taagcgctgg cgtcatcgat agcccgcaga gtgttgtctg ggatgaggcg
      781 gagaaccggt tgtcctcgca aaaggcattg ctcgagttct tgttagccaa atgaggccac
      841 ggagcgagca agatgagaac agtaggccag ttatgttttt tttggtgagt aatgatgatg
      901 gttatcgtgc acccgggatc gtgcagctcg cccaagctct tgccgaactg ggggaagtag
      961 tggtagtagc gcctgatcgc aactgcagcg gggccagtaa ttcactgacc ttggatacgc
     1021 ccattcgggc atcgaaggcc gacaatggct ttatcgtggt cgatggcacc ccgaccgatt
     1081 gtgtgcatct ggcgatcacg gggcttttgg aacggatgcc ggatatggtc gtggcgggcg
     1141 tcaacgaggg accgaactta ggggatgatg tgctctattc agggacggtg gcggccgctg
     1201 tagaagggcg gtttttgggc ttgccggcca tggccgtctc gctcgcgggc gatcgggtcg
     1261 tgcattatga aacggccgcg agagttgcca gattgttggt gcaggagatg ggagcgcggc
     1321 ccctgtcggt ggataccatc ttaaacgtca atgtgcccga tcggccctgg gggcaactgg
     1381 cgggatttga agcgactcgg cttgggcggc ggcataaatc cgagcctgtg gtgcagacac
     1441 tcgacccgcg cgggcgcccg atctattggg taggaccacc gggtcctgag gaagacgcgg
     1501 ggcccggaac cgattttcat gcggtaaaga caggccatgt ttcaattacc cccttgcagg
     1561 tggatctgac ccgttatacg gcgcttgaaa ccgtgtccca ctggttgacg ggtatgaagc
     1621 tcgatgagaa gatctgacac ccccggcata ggcatgatgt ctgtactact gtggaagggg
     1681 gtcgcctgat gccatgtgct tggggctgct ccataacaag gttgggtatg gtgtttgggt
     1741 catcattctc atgctggtaa gtgcctgtgg cggttttggc ttggcccctg tcacgacgta
     1801 tgaggccggc aaagggcatg ccgctcaaaa cccgcctcat tctcgttcta tccctgtcta
     1861 tcatagtgtc aagtggggag ataccttaat ctcaattgcc tggcgttacc ataaagatta
     1921 ccgcgatctt gcccgttgga atggaattgc caagccgtac cggatatata aggggcagcg
     1981 acttcgcctg gctccgcctc tcagatccga gcggtcttcg gcaaagggcg tgcgtagacc
     2041 ccaaaaaacc gctgctacac tcgcccgagc accgctgcgg aaaaccaagc tcccgggcga
     2101 tcaaggaagg tcaacgggca ttgagtggca gtggccggcc cagggaaaac tgctgcgatc
     2161 agggacggtg cgtgccaagc aaggactcga gatcctgggg tgggaagggc aaccgatcag
     2221 ggccgcagcg cctgggacgg tgatctatag cggcgatgga ctgagaggtt atggaaagct
     2281 tattattatt aaacacagcc ctatctactt aagcgcctat gcccataaca gccggttatt
     2341 ggttagagaa ggcgcgacgg tgtttgcagg gcagcaaatc gccgaaatgg gacatactgg
     2401 aaccatgcac gtcaaattgt attttgagat tagacagaac ggaaagcccg tgccacccct
     2461 ccactatctg cctaaacgcg ctctagatct gtcgggttta aggtaggtgc cgatccacgc
     2521 acggtattag gagaatgact atgaccgacg agcaggatga ggacgagctc tttaacagta
     2581 gtgag
//
LOCUS       DASQSL010001362         1247 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_49739, whole genome shotgun sequence.
ACCESSION   DASQSL010001362 DASQSL010000000
VERSION     DASQSL010001362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1247)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1247)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1247
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49739"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..413
                     /locus_tag="VE844_14000"
     CDS             <1..413
                     /locus_tag="VE844_14000"
                     /inference="COORDINATES: protein motif:HMM:NF023227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02418.1"
                     /translation="EKTGRRLRRARYSAQGVHVSCVYTDLSWWHIGRKFDVPVYTTRD
                     IYIKALRLLNMSGYKKPVRNLAVSVYDLIPSTDEQLELFASPAHAVAEAMDEINDKWG
                     EFVITPALMLGMDDIILDRIAFGGVKELEDIYAE"
     gene            589..1026
                     /locus_tag="VE844_14005"
     CDS             589..1026
                     /locus_tag="VE844_14005"
                     /inference="COORDINATES: protein motif:HMM:NF033580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZC02419.1"
                     /translation="MEPRQLYPTDLSDQEWALIQSYVPKARRGGRPEAYPKREILNGI
                     FYLLRTGCSWRMLPHDLPPWRIVYHYFRTWRQDSTWHVMHDLLRGDVRVAEGKQRQPS
                     AGIIDSQSVKTTEKGGSTATTSRKTSAAVNGTSSSTPSGCSSR"
     gene            915..>1247
                     /locus_tag="VE844_14010"
     CDS             915..>1247
                     /locus_tag="VE844_14010"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02420.1"
                     /translation="MGQDHRKRGVHGYDKPKNVSGRKRHILVDTLGLLLTVVVTAASV
                     QDRDGAMSLLDVLRHRFSRLRVIWADQAYAGDLIAWVWALRPWRKVRLEMAQRPEGIK
                     GFRLLPKRW"
BASE COUNT          268 a          354 c          351 g          274 t
ORIGIN      
        1 gcgaaaagac agggcggcga ctccgcagag ccagatactc agcccaaggc gtccatgtgt
       61 cctgtgtcta tactgattta tcctggtggc atataggccg caagtttgac gtcccggtct
      121 acaccacgcg ggatatttat atcaaagcgc ttcggcttct gaatatgtcc ggctataaaa
      181 agccagtccg gaacctcgcg gtcagtgtct acgatcttat cccctcaacc gatgaacaac
      241 tagagctctt cgcctcccct gctcatgcgg ttgctgaagc gatggatgag atcaatgaca
      301 agtggggcga attcgtcatc accccggcct taatgctggg gatggatgat attattttag
      361 accggattgc cttcggcggc gtcaaagagc ttgaggacat ctatgcggag tgaaatgtat
      421 aatgaaatca tgcgcttact tgataggctt gctcagagca tatcgttcag tatgctgaaa
      481 cgctggatgc ttatcggctt ttcgcttgtc cttctgggct tgtcctccct ctaagagggt
      541 gtctaaaaag cttgtgttag acggccgaga tggggtattc tccgaggcat ggaaccccga
      601 caactttatc cgaccgatct gagtgaccaa gaatgggcat tgattcaatc ctatgtcccc
      661 aaggctagac ggggcggccg acccgaggca taccccaagc gggagatcct caatggcatc
      721 ttctatttgc tgcgcacggg ctgttcctgg cgcatgctgc cccatgacct tcccccgtgg
      781 cgcattgtct atcattactt ccggacctgg cgccaggata gcacttggca cgtcatgcac
      841 gatctcctcc ggggcgacgt ccgcgtcgcc gaaggcaagc aacgccaacc cagcgcgggg
      901 atcatcgata gccaatcggt caagaccacc gaaaaagggg ggtccacggc tacgacaagc
      961 cgaaaaacgt cagcggccgt aaacggcaca tcctcgtcga caccctcggg ctgctcctca
     1021 cggtagtggt cacggctgcc agcgtgcaag accgtgacgg agccatgtcc ttgctggacg
     1081 tcctgcggca ccgcttttct cgcctgcgcg tgatctgggc cgatcaggcg tatgcgggag
     1141 acctcatcgc ctgggtgtgg gccttacgac cctggcggaa agtgcgcctg gaaatggctc
     1201 agcgaccaga gggaatcaag gggttccggc tccttccgaa acggtgg
//
LOCUS       DASQSL010001363         1049 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_104660, whole genome shotgun sequence.
ACCESSION   DASQSL010001363 DASQSL010000000
VERSION     DASQSL010001363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104660"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..665
                     /locus_tag="VE844_14015"
     CDS             <1..665
                     /locus_tag="VE844_14015"
                     /inference="COORDINATES: protein motif:HMM:NF015038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02421.1"
                     /translation="LLKQRQADQDPPLVMSDALARNEVAAPLVIRCHCLAHGRRQFSD
                     LEELFPVECQVVLDMLKQVFDHDEEARDQQMNPAARLAYHQAVSRPLLDELKGWLDQQ
                     FDDRLVEPNSALGQAISYMQTHGTTLTRFLEIEGAPLDNNLVERVLKLFIRQRNNSLF
                     YKTEYSAYIASVLTSLIVTCIYAGVHVLDYLEALQEHRAEVFGDASAWLPWTYQASLA
                     PP"
     gene            complement(662..>1049)
                     /gene="tnpB"
                     /locus_tag="VE844_14020"
     CDS             complement(662..>1049)
                     /gene="tnpB"
                     /locus_tag="VE844_14020"
                     /inference="COORDINATES: protein motif:HMM:NF017528.4"
                     /note="TnpB, as the term is used for proteins encoded by
                     IS66 family insertion elements, is considered an accessory
                     protein, since TnpC, encoded by a neighboring gene, is a
                     DDE family transposase; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HZC02422.1"
                     /translation="DRYRPQLFGGPIMLQLTPQSRIFLATEPVDFRKGIDGLGAVCRQ
                     RLGDNPLEGAVYVFRNRASTALKLLLYDGQGYWLCMKRLSQGRFTWWPQTPDARVPLS
                     ARELMILMWNGDPERAQMAQDWRRVA"
BASE COUNT          218 a          309 c          309 g          213 t
ORIGIN      
        1 cgctgttgaa gcagcgccaa gcggatcagg acccacccct cgtaatgtcg gatgcgctgg
       61 cgcgcaatga ggtcgcggcc cccttggtga ttcgctgcca ctgtctggcg catggccgtc
      121 gtcagttcag cgacctcgaa gagctctttc ccgttgagtg tcaggtggta ctcgatatgc
      181 tcaaacaagt atttgaccat gatgaagagg cccgcgacca gcagatgaac ccggctgcac
      241 gcttggctta ccaccaagcg gtcagtcgac cgttgctgga cgagcttaag ggctggctcg
      301 accagcagtt tgacgatcgc ttagtggaac ccaacagtgc cctaggtcag gccatttcct
      361 acatgcagac ccatgggacc acgttgacgc gatttttgga aattgaaggc gcccccctgg
      421 acaacaactt ggtcgagcgg gtcttgaagc tgttcatccg acaacgcaac aactcgctgt
      481 tctacaagac ggagtacagt gcctacattg ccagtgtact caccagtctg atcgtcacct
      541 gcatctatgc gggggtgcat gtcctcgatt acctcgaggc gcttcaagag caccgcgccg
      601 aggtgtttgg cgatgcctcg gcgtggttgc cgtggacgta tcaagcgagt ctggccccgc
      661 cctaggcgac gcgtcgccaa tcctgagcca tctgggcgcg ctcgggatcg ccattccaca
      721 tcagaatcat caactcccga gccgacaagg gcactcgtgc gtccggggtc tggggccacc
      781 aggtgaagcg accctgagaa agtcgcttca tacacaacca gtacccctga ccgtcgtaaa
      841 gcaggagctt gagggcggtg ctggcgcggt ttcggaagac gtaaacggcg ccctcaagcg
      901 ggttgtcgcc caggcgctgt cggcacacgg ccccgagtcc atcaatgcct tttctgaaat
      961 cgaccggttc agtggctaaa aagatacggc tttggggggt gagttgcagc attatcgggc
     1021 ctccaaaaag ctgtggacga tagcggtca
//
LOCUS       DASQSL010001364         1459 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_104662, whole genome shotgun sequence.
ACCESSION   DASQSL010001364 DASQSL010000000
VERSION     DASQSL010001364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1459
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104662"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(403..825)
                     /locus_tag="VE844_14025"
     CDS             complement(403..825)
                     /locus_tag="VE844_14025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02423.1"
                     /translation="MAEGSHSIRLSLRNILLLGVLMLAAASTGIISIGSAFMADDLTL
                     VRAGKHMMQEDFLRPFYRPWIWDEIAEGWPVTSLYYYRPITVATFAWDYFWFGLNPTG
                     YHLTNVLLHIAATILVYMLALRLFSKLAFGQHSCDFVR"
     gene            complement(921..>1459)
                     /locus_tag="VE844_14030"
     CDS             complement(921..>1459)
                     /locus_tag="VE844_14030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02424.1"
                     /translation="LQVIGAGLLVWGIGMAIQCVPGKVRVLGQRVVLVGILFAYVVPF
                     ALLATHYGTTHYTGPLKEKHAQQIGDLHSQMDKLTAQLSALKSEVSLFAPLDSVDAVR
                     RRITAIGSSISSAVQGSMQAMLYYIVIILFELLVFPLISAYLLFKFLQLALGRVLDRP
                     VVIKQAPPPAPLPALADK"
BASE COUNT          364 a          369 c          458 g          268 t
ORIGIN      
        1 ggatattata tcaaaatttc aaagagcgat tatcacacct ccatttccga taaccgcatt
       61 atcggcaatg agccgacgcg cgggtggctc gcggacaggg cagcttgttt ccatataggg
      121 ttaaaaccaa cattcatgac accaggggca ataacctgcg ctttctgacg ctgaggcgcg
      181 agatggcctt ggggcagcag ccacgcaaaa aagtacgcta atgtattgtg cgaataaata
      241 cccttgagtt aacgtgttga ttcagggcgt acaatacggc tttttcgtgt ggtttagttc
      301 gtgcaaagca tcatgcacgc acaatatgaa cgaataattt ctgtatccag cttcgcagca
      361 aaatcaataa gatagagtca aagaaattat tcgtacaata cgttaccgca caaaatcgca
      421 gctatgctgc ccaaacgcca gcttcgagaa aaggcgcagc gccagcatgt agaccagaat
      481 ggtggcagcg atgtgaagca ggacattggt gaggtgatag ccggtgggat tgaggccaaa
      541 ccagaagtag tcccaggcaa aagtcgccac ggtaattggg cggtagtaat agagactcgt
      601 gaccggccag ccttcagcta tctcgtccca aatccagggg cggtagaagg ggcggaggaa
      661 gtcctcctgc atcatgtgct tcccggcgcg gacaagcgtg aggtcgtcgg ccatgaaggc
      721 ggagcctatg gagataatac cggtggacgc agcggcgagc atcaacaccc ccagcaggag
      781 gatgttgcgc aacgacaacc ggattgaatg tgagccttca gccatgcaga cgcccccaaa
      841 tgcgtccagt gcgacccctc gcgcggcgaa ggatacaaaa cagcgggcca ttatggcata
      901 aggcgaagcc ggagggagaa ttatttgtcc gccagggctg gcaatggggc cgggggcggc
      961 gcttgcttga tgaccaccgg ccggtcgagc acgcgcccca gcgccagttg caggaacttg
     1021 aagagcagat acgcgctgat gagggggaag acgagcagct cgaacaggat gatgacgatg
     1081 tagtagagca ttgcctgcat gctgccctgc acggcgctgg agatggaact gccgatggcc
     1141 gtgatgcggc ggcggacggc gtcgacgctg tcgagcgggg cgaagaggct gacttcagac
     1201 tttagcgcgc tgagctgggc cgtgagcttg tccatttggg agtggaggtc gccgatctgc
     1261 tgggcgtgct tctccttgag cgggccggtg tagtgggttg tgccgtagtg ggtcgcaagg
     1321 agagcaaaag ggacaacgta ggcgaagaga atgcccacca acaccacccg ttgtccaaga
     1381 acgcggacct tcccgggcac gcactggatg gccatgccga tgccccagac gaggaggccg
     1441 gcgccaatga cctgaaggc
//
LOCUS       DASQSL010001365         1367 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_115494, whole genome shotgun sequence.
ACCESSION   DASQSL010001365 DASQSL010000000
VERSION     DASQSL010001365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1367
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115494"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            107..490
                     /locus_tag="VE844_14035"
     CDS             107..490
                     /locus_tag="VE844_14035"
                     /inference="COORDINATES: protein motif:HMM:NF025704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4398 domain-containing protein"
                     /protein_id="HZC02425.1"
                     /translation="MKKAVLKQGMGATFALGAALAVSGCAGTPPPVDDVSTAEMALNR
                     ALEAEAEQHSPLALRVAREKLDRAEQAMNDAEYEQARRLAEQAQVEAQLAEAQARSQV
                     ARQQAQEVQTTIDALRQEAGKAVGR"
     gene            522..1328
                     /locus_tag="VE844_14040"
     CDS             522..1328
                     /locus_tag="VE844_14040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013033715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HZC02426.1"
                     /translation="MTNPTPFFPFPVRQLALSAIVLCTACAGPNMALQEAQQAYRQAE
                     QDPQVTSHAPVALHEAAQALSEAEQADGQEEVEHMAYITKKRVEIARAEAERKLAEDN
                     AKQLLEGRDEVIAQQAKARAQELEQELAALKAKRTDRGFVITLGDVLFEYNQARLKPG
                     AQQNLYRLVSFLKQRPEQNVLIEGHADNSGSESYNLGLSQRRAQAVQNFLVMNGISPE
                     RINARGYGEAYPVASNGTAAGRQQNRRVEIVFGEGQRPALSGRGKGSAAP"
BASE COUNT          332 a          378 c          431 g          226 t
ORIGIN      
        1 gatggatcac taaggtgttg aataatataa aattaaaata acaaaaggct atggcatagt
       61 catcgcataa aatccgattg aacgataaat tgcgaggggt tcgaccatga agaaggcagt
      121 attaaagcag gggatgggag caacgttcgc tctcggcgcc gcgctggcag tgtccggttg
      181 cgccgggaca ccaccgcctg tggatgatgt atctaccgca gagatggcct tgaatcgagc
      241 gctggaggcc gaggcagagc agcactcccc actcgcgctg cgcgtggcgc gggaaaaact
      301 cgaccgtgcc gagcaggcca tgaatgatgc ggaatatgaa caagcccgta ggctagctga
      361 gcaagcacag gttgaggcgc agctcgcaga ggcgcaagcc cgatcccagg tggcccgcca
      421 acaggcccaa gaggtccaga ccaccattga tgccttacgc caagaagccg gtaaggccgt
      481 aggacgatag ccgatccggc gtaagcacgg agaacaaacc catgacaaat ccaacaccgt
      541 tttttccatt tccggttcgg caactggcgc tgagcgctat tgttctgtgc accgcttgtg
      601 ccggtcctaa tatggcctta caagaagcgc agcaggccta caggcaagcg gagcaggatc
      661 cgcaggtgac gagccacgcg ccggtggccc tacacgaggc tgcccaagcc ttgagtgagg
      721 cggagcaggc cgacggccag gaggaagtag agcatatggc ctacatcacc aagaagcggg
      781 tcgagatcgc acgcgccgag gctgagcgga agctggccga ggacaacgct aagcagctcc
      841 tcgaggggcg tgatgaggta attgcccagc aggccaaggc acgcgctcaa gaacttgagc
      901 aggagctggc cgcgctcaag gccaagcgga ccgatcgagg ctttgtgatc acgctcggtg
      961 atgtgctgtt tgagtataat caggcacggc tcaagcccgg cgcccagcag aatctctatc
     1021 ggctcgtcag cttcctcaaa cagcgccccg agcagaacgt gctgatcgaa ggccatgccg
     1081 ataacagcgg ctccgagtcg tataacctgg gactttctca gcgacgcgcc caggccgtgc
     1141 aaaacttctt ggtcatgaat gggattagtc ctgagcggat caacgcgcgc ggctatggag
     1201 aggcctaccc ggtggcatcg aacggcaccg cggccgggcg tcagcagaac cgacgggtcg
     1261 agatcgtctt cggtgaaggg cagcgaccgg ccttgtccgg taggggcaaa ggttccgccg
     1321 cgccttaacg agagataata gagccatagg cgtatctgtc ggggtca
//
LOCUS       DASQSL010001366         1438 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_115499, whole genome shotgun sequence.
ACCESSION   DASQSL010001366 DASQSL010000000
VERSION     DASQSL010001366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1438)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1438)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1438
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115499"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..610)
                     /locus_tag="VE844_14045"
     CDS             complement(<1..610)
                     /locus_tag="VE844_14045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02427.1"
                     /translation="MRERLDPVDPAHLRPAFKTVLRHLQRGKALEEMVFVQGHDLLAL
                     DGTGYFSSKAIACDSCLEKHHRNGTITYSHQMLGAALIHPDKREVIALMPEPIVKPDG
                     TEKNDCERNAAKRFATKFRQDHPPLKVMVTEESLSSNAPHMETLQAHNMRYLLGVKEG
                     DHAFLFEQVAQAEHAGRVTYYDRDDHNANVHHRFRFVSNLPLN"
     gene            complement(620..862)
                     /locus_tag="VE844_14050"
     CDS             complement(620..862)
                     /locus_tag="VE844_14050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02428.1"
                     /translation="MGMVIPKARKHLCADAWLRSVQDVFCQVRDPRTGDSEIALGDAL
                     MSAFALFSLKAPSLLAFDKERSEDNLQRVYGIGRVP"
     gene            complement(1032..>1438)
                     /locus_tag="VE844_14055"
     CDS             complement(1032..>1438)
                     /locus_tag="VE844_14055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02429.1"
                     /translation="RYVVAVRCDVQVRLPASASWETLVDYAHRRYAIEQFHEEAKEEL
                     GWDQYQGRLWPGFHRHAVTVMLAMSFLTGLELQHRHSCPHRGRPRDPFSPSARLASPC
                     AASGTPGGGTVAASPSGGVVDHDGAVQATVLT"
BASE COUNT          329 a          399 c          409 g          301 t
ORIGIN      
        1 cattgagcgg caggttcgag acaaaacgaa accgatggtg aacgttggcg ttatgatcgt
       61 cacgatcata ataggtcaca cgaccggcgt gctcagcctg ggccacctgc tcaaacaaaa
      121 aggcatgatc cccttctttg acccctaaaa ggtatcgcat gttgtgcgct tgcagggtct
      181 ccatatgggg ggcattcgaa ctgaggctct cttcggtgac catcaccttg agagggggat
      241 gatcctgacg aaacttggtg gcaaaacgct tggcggcgtt gcgctcacaa tcatttttct
      301 cggtgccatc gggcttgaca atgggctcgg gcatcagcgc aatgacttca cgtttatcgg
      361 ggtgaatgag cgctgcaccc aacatctgat gggaataggt gatcgtaccg tttcggtggt
      421 gcttttctag acacgagtcg caggcaatcg ctttggagga aaaatagccg gtgccatcga
      481 gagcgagcag gtcatggccc tggacaaaca ccatctcttc aagggctttg ccacgttgaa
      541 gatgacgcaa caccgtcttg aatgcgggcc tcaggtgtgc agggtcgacc ggatcgagtc
      601 gctcgcgcat cgacgtgtct cacggcactc gcccgatgcc atacacgcgt tgcaagttgt
      661 cttcgcttcg ctccttatca aacgcgagaa gcgagggcgc tttgagggag aacagggcaa
      721 aggccgacat cagggcatca cccaaggcaa tttcagaatc ccctgttcgg ggatcgcgaa
      781 cttgacaaaa gacgtcttgg accgaccgca accaggcatc ggcacagaga tgttttcgcg
      841 cttttggaat caccatgccc atggaaaacc ccaatccaaa atggacccct tgatgtcatg
      901 agagccatat tttggcatgg cggtttacga aaaggcaagt ggtgaatacc cgatgaatgc
      961 tggcttttat ggggctccgg gaattgctgg ttgtttgatc cgattcgcgc ttagtactac
     1021 tttgtcagat tctaagtgag cacagttgcc tgaactgctc cgtcgtgatc caccacaccc
     1081 ccgcttggtg acgcagccac cgtgccacct cccggtgtac cgctggcagc gcacggcgac
     1141 gccaatcggg ccgaggggga aaaagggtcg cgtgggcgac cccggtgggg acagctgtgg
     1201 cggtgttgca actccagacc cgtcagaaaa ctcatggcca acatgacggt caccgcatga
     1261 cgatggaagc ccggccaaag acggccttga tactggtccc agcccaactc ctccttggct
     1321 tcctcatgga attgctcaat ggcatagcga cgatgggcat aatccaccag ggtctcccaa
     1381 gacgccgagg cgggcagacg cacttgaacg tcacaccgca cggccaccac gtagcgtt
//
LOCUS       DASQSL010001367         1009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_160093, whole genome shotgun sequence.
ACCESSION   DASQSL010001367 DASQSL010000000
VERSION     DASQSL010001367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160093"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..277
                     /locus_tag="VE844_14060"
     CDS             <1..277
                     /locus_tag="VE844_14060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphorylated adapter RNA export RNA-binding
                     domain-containing protein"
                     /protein_id="HZC02430.1"
                     /translation="KLGEVEREPLKRLKAVVKILGPDQALALCEKALEVEQQGGMLTQ
                     DGTRRRSPGGVFFYLVRGSNNKKVHKLWPQRKPESATPDTPPASQEG"
     gene            561..977
                     /locus_tag="VE844_14065"
     CDS             561..977
                     /locus_tag="VE844_14065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02431.1"
                     /translation="MATKRQSGKGDLDRRAILMLGLAGASALGLGKANSVLAAEEKGI
                     ERKVIKETESMIPGFGKIRVRDTIFQPGASLPERPMKNHMICELTQGTLEVTQNGKTW
                     TAKKGDFWTCKEGGTEGDVNKGETIAIMRAIDLLPA"
BASE COUNT          254 a          271 c          311 g          173 t
ORIGIN      
        1 aaaactcggc gaagtggagc gggagccgct caagcggctc aaggccgtgg tcaagattct
       61 cgggcctgac caagcgctcg ccctgtgtga aaaagctctg gaggttgagc agcagggtgg
      121 gatgctgacc caagacggca cccgccgaag aagcccgggc ggcgtgttct tctacctggt
      181 gcgcggcagc aacaataaga aagtccacaa gctctggccg cagcgtaagc cagagtccgc
      241 cacaccggac actccccctg ccagccagga agggtgacac accggcccta ccgtctctga
      301 agcatccgct gatacgccac accatcactc atcccgaaaa ccaccctttt ttgcgacagc
      361 gcccttttct cacaccacca cacgttcggc ctgaatggag gggttggggt ggttgactgc
      421 tgctcgcgtc agggatataa ggtttccatt gtcatggcgc cctgcgagcg ctgatcatgg
      481 gcatgaggca aaactgcccg aaaactaagc caatatcgcc taatcagggc aaaatggcct
      541 gttaatcaaa ggagggaact atggcgacga aacgacagtc gggtaaggga gacctggacc
      601 ggagagcgat attgatgctg ggtctcgcgg gcgcatcggc gctcggcttg ggaaaggcta
      661 acagcgtgtt ggctgcagag gaaaaaggga tcgagagaaa agtcatcaag gagactgagt
      721 cgatgatccc aggcttcggc aagatacggg tgcgtgacac gatctttcag cctggggcaa
      781 gcctccccga acgcccgatg aaaaaccaca tgatctgcga gttgacccag gggaccttgg
      841 aagtgacgca gaacggtaaa acatggacgg cgaagaaagg cgacttctgg acgtgcaaag
      901 aagggggaac agagggggat gtcaataaag gggaaactat agcgattatg cgcgccattg
      961 acttgttacc agcgtagccg ggtctcgctg gccgagtctg cgccttcca
//
LOCUS       DASQSL010001368         2352 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_78022, whole genome shotgun sequence.
ACCESSION   DASQSL010001368 DASQSL010000000
VERSION     DASQSL010001368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2352
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78022"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2352)
                     /gene="rpoC"
                     /locus_tag="VE844_14070"
     CDS             complement(<1..>2352)
                     /gene="rpoC"
                     /locus_tag="VE844_14070"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002811549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HZC02432.1"
                     /translation="SKTRRERMGHIELASPVAHIWFLKSLPSRIGLLLDLTLRDIEKI
                     LYFEAYIVVEPGMTPLERGQSLSEEAYLDAIEQYGDDFDARMGAEAMYELLRTIDLAS
                     ETARIQEEIAKTASETKLKKLTKRLKLIEAFLHSGNKPEWMVLKVLPVLPPELRPLVP
                     LDGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPDIIVRNEKRMLQEAVDALLDNGRR
                     GRAITGSNKLPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPTLKLHQCGLPK
                     KMALELFKPFIFSKLQRTGAATTIKAAKKMVEREGAEVWDVLEDVIRQHPVLLNRAPT
                     LHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSIEAQIEARTLMMS
                     TNNILSPADGEPIIVPTQDVVLGLYYMTREQIGARGEGMIFSNVDEVHRAYETRTVDL
                     HARIQVRMKMVSIDEGGARRETVERVETTVGRALLSSLLPEGLAFDLINRIMNKKAIS
                     NLINACYRQMGLKETVIFADKLMYMGFHQATRAGISIGVDNMVIPKEKSAIIVAAEEG
                     VKEIEEQYASGLVTKGERYNKVVDIWSYANDQVAKAMMDRLGTEVVKDRQGNEARQAA
                     FNSIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFIST
                     HGARKGLADTALKTANSGYLTRRLVDVAQDQVVTEEECGTRDGLVMTPIIEGGTVVET
                     LADRVLGRTLAEDIRSMEDTDTVLIPGGTLLDEKWVQRLDELGV"
BASE COUNT          487 a          720 c          628 g          517 t
ORIGIN      
        1 acacccaatt catcgagccg ctgcacccac ttttcgtcta atagagtgcc ccccgggatc
       61 aataccgtat ccgtatcctc catggagcga atatcctccg ccagcgtccg gcctaataca
      121 cgatcggcca gcgtttccac gacggtgccg ccctcgatga taggggtcat taccagcccg
      181 tcccgggtgc cacactcctc ctcggtgact acctgatctt gcgccacatc gaccaagcgg
      241 cgtgtcaaat agcccgaatt ggcagtcttc aaggccgtgt ctgcaagacc cttgcgtgcg
      301 ccatgggtag agataaagta ctgcaacaca ttgagacctt cacggaaatt ggcggtgatc
      361 ggggtctcga tgatcgaccc atcgggcttg gccatgagtc cccgcatgcc cgccaattgc
      421 cggatctgtg ccgccgatcc cctggccccc gaatccgcca tcatgaagat ggagttaaaa
      481 gcggcttgcc gggcctcgtt gccctgtcta tccttgacga cctcggtgcc gagccggtcc
      541 atcatggcct tggccacctg atcgttggca taagaccaga tatccactac cttgttatag
      601 cgctcccctt tagtgacgag ccccgaggca tactgctcct caatctcttt gacaccctcc
      661 tcggcagcaa caatgatcgc gctcttctct ttgggtatca ccatgttgtc cacgccgatg
      721 gaaataccgg cgcgggtggc ttggtggaac cccatgtaca ttaatttatc cgcgaatatg
      781 accgtttcct tgagccccat ttggcggtaa caggcattga tgaggttcga gatcgccttc
      841 ttattcatga tccgattgat gaggtcaaaa gccagacctt caggcagcag agacgataac
      901 agcgcccgcc ctacggtcgt ctccacccgc tccaccgtct ctcggcgtgc tcccccttca
      961 tcgatagaga ccatcttcat gcgcacctgg atccgggcat ggagatcgac ggtgcgggtc
     1021 tcataggccc gatgcacctc atccacattg ctaaatatca tcccttcacc acgcgcaccg
     1081 atctgctccc gggtcatata gtaaaggccg agcaccacat cttgggtcgg gacgatgatc
     1141 ggctcgccat cagccggcga gaggatgtta ttagtggaca tcatcaaggt acgggcctcg
     1201 atctgtgcct cgatcgacaa gggcacatgc acggccatct ggtccccgtc aaaatcggcg
     1261 ttgaaggctg tgcaaacgag cggatggagc tggatcgcct tgccctcgat gagcaccggc
     1321 tcaaaggcct ggatccccaa ccgatgcagg gtaggcgcac ggttcaagag gaccggatgt
     1381 tggcggatga cgtcctcgag cacatcccac acctcagctc cttcgcgttc caccatcttc
     1441 ttggcggcct tgatcgtggt ggcggccccg gtccgctgca atttgctaaa gatgaagggc
     1501 ttgaacagct ctaaggccat ctttttcggt aaaccgcatt gatgcagctt gagcgtgggc
     1561 ccgaccacga tcaccgaacg ccccgagtaa tcgacacgct tgcccaatag gttctggcgg
     1621 aaccggcctt gcttgccctt gatcatatcg gcgagcgatt tcaagggcag tttattggaa
     1681 ccggtgatgg ctcgcccccg gcggccgttg tcaaggagcg catccacggc ctcctggagc
     1741 atacgtttct cgttgcggac gatgatatcc ggggcgttga ggtcgagcag ccgtttcaaa
     1801 cgattgttac ggttgatgac ccggcgataa agatcattaa gatccgaggt cgcaaagcgg
     1861 ccgccatcca gcggaaccaa gggtcgaagc tcgggtggta gtaccggcaa gaccttgagc
     1921 accatccact cgggtttatt acccgaatgc aaaaaggcct cgatcaattt gagccgcttg
     1981 gtcagcttct taagtttggt ctctgaggcg gtcttagcga tctcctcttg gatcctcgcc
     2041 gtctcgctcg cgagatcgat ggtgcgaagc agctcataca tagcctccgc ccccatccgg
     2101 gcatcaaagt catcgccgta ctgttcaatc gcatcgagat aggcctcttc cgagagcgac
     2161 tgtccccgct ccaagggcgt catgcctggt tcaacgacga tgtaggcttc aaagtagagg
     2221 atcttctcga tgtcgcgcag ggttaaatca agcaatagcc cgatccggga cggcagggac
     2281 ttgagaaacc agatatgcgc gaccggactc gccagttcga tatgtcccat gcgctcgcgc
     2341 cgcgttttgg ag
//
LOCUS       DASQSL010001369         1281 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_188682, whole genome shotgun sequence.
ACCESSION   DASQSL010001369 DASQSL010000000
VERSION     DASQSL010001369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1281
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188682"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1281)
                     /locus_tag="VE844_14075"
     CDS             complement(<1..>1281)
                     /locus_tag="VE844_14075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018233926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HZC02433.1"
                     /translation="TALFRFQEHDIYLPMGVLEELDALKKGVSEVARNARQVSRFLDE
                     LIGCADREAIERGLTLPYPQNAGNTPRPSGRLFLETHPLPHDLPPSVPGNKPDNLILS
                     TALALQSLHPDKTVILVSKDINLRIKARVLGVHAEDYYSDKVLDDVSLLYSGIQALPE
                     DFWEQQGQDLRCWQENGRTFYSIQGPIVTRWYPNQCLYHRDDFAAIVQEIEGDEAKLQ
                     LAIDFRVPRHAVWGITARNREQNYALNLLMDPNVDFVTLLGTAGTGKTLLALAAGLAQ
                     TMDIQRYREIVMTRVTVPVGEDIGFLPGTEEEKMTPWMGALIDNLEVLTQTEIGGEWG
                     RAATADLLQKRIKIRSLNLMRGRTFLNRYVIIDEAQNLTPKQVKTLITRAGPGTKIVC
                     LGNIGQIDTPYLSETTSGLTYVVDCFKEWKYSGHI"
BASE COUNT          255 a          368 c          377 g          281 t
ORIGIN      
        1 aatatgcccg ctgtatttcc actccttgaa gcagtcgacc acataggtaa ggcctgaggt
       61 cgtctcgctc aagtaaggtg tgtcgatctg gccgatgtta ccgagacata ctatcttggt
      121 gccgggtccc gcccgtgtga tcagggtctt cacctgcttg ggcgtcagat tctgggcctc
      181 atcgatgata acatagcgat ttaaaaaggt ccgtccgcgc atgaggttga gcgatcggat
      241 cttgatgcgt ttctgcagca gatccgcggt cgcagcacgc ccccattctc cgccgatctc
      301 ggtttgcgtc agcacctcca gattatcgat aagagcgccc atccagggcg tcatcttttc
      361 ctcctcggtg cccggaagaa acccgatgtc ctcaccgaca ggcaccgtaa cccgggtcat
      421 cacgatctcc cggtagcgtt ggatatccat cgtctgagcc aggccggcgg ccagcgcgag
      481 taaggtctta ccggtccctg cggtcccaag cagggtgacg aaatcgacgt tgggatccat
      541 cagcaggttc aaggcgtagt tctgttcgcg attacgggcg gtgatccccc agacggcatg
      601 gcgggggacg cgaaaatcga tggcgagttg cagcttcgcc tcgtcgcctt caatctcctg
      661 gacgatcgcc gcaaaatcat cgcggtgata gaggcactgg ttaggatacc agcgcgtcac
      721 gatcgggccc tggatcgaat aaaaggtgcg tccgttctcc tgccagcaac gcagatcctg
      781 gccttgctgt tcccaaaaat cctcgggcaa tgcttggata ccgctgtaaa gtagactgac
      841 atcatccagc accttgtcgc tgtagtagtc ttccgcatgc accccgagca cccgcgcctt
      901 gatccggaga ttaatgtctt tggagaccag gatcaccgtc ttgtccggat ggaggctctg
      961 cagcgccagc gcggtgctca ggatcaggtt gtccggtttg ttaccgggca ccgagggggg
     1021 tagatcgtgg ggcagggggt gggtttcgag aaataagcgg ccgcttgggc gcggtgtgtt
     1081 tccggcattt tggggataag gcagggtgag accccgttca atggcctcgc gatccgcaca
     1141 accgatcaac tcatccagaa agcggctgac ctggcgggcg ttgcgggcga cctccgatac
     1201 gcccttcttg agtgcatcca gctcttccag cacccccatg gggagataga tgtcgtgctc
     1261 ttgaaaacga aacaaagcgg t
//
LOCUS       DASQSL010001370         1165 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_12032, whole genome shotgun sequence.
ACCESSION   DASQSL010001370 DASQSL010000000
VERSION     DASQSL010001370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1165
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12032"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..390)
                     /locus_tag="VE844_14080"
     CDS             complement(<1..390)
                     /locus_tag="VE844_14080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02434.1"
                     /translation="MDRAFLDWALESFSGYVAADELYEGPYCVLSVVDNRAYKRILYE
                     VLDHDPTHDDITALLQRLKRALTARDLALQGITTDGSPLYPEPIRTVFGDMAHQICTF
                     HVLKELTQGILRAVAAERSRLTNSKPKS"
     gene            complement(359..847)
                     /locus_tag="VE844_14085"
     CDS             complement(359..847)
                     /locus_tag="VE844_14085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02435.1"
                     /translation="MFGPGEYVPDPTESIVDVNDLPKPIVMPDDHNYDHSPCLRCGHL
                     AYRHKSGQRTLHDLGDLKTGRPIDLLVTYSSHYCSKCRKYFNVDLSDLALPGSHYTRR
                     VIQLAVRLVVEDGLPYRPASWHLWRDHRVFVPFATIQNWVEAGGKKGAPTDGPRLSGL
                     GP"
BASE COUNT          273 a          296 c          344 g          252 t
ORIGIN      
        1 cgacttgggc ttggagttgg tcaatcggct gcgctcggct gcgacggcac ggaggatacc
       61 ttgggtgagc tccttgagga catggaaggt gcaaatctga tgcgccatgt cgccaaacac
      121 cgtgcggatg ggctcgggat agaggggcga gccatcggtg gtgatgccct ggagtgccaa
      181 gtcgcgagcc gtcaatgccc tcttcaagcg ttgcaacaag gcggtgatgt catcatgggt
      241 ggggtcgtga tccagaacct catagagaat ccgcttgtac gctcgattgt cgaccaccga
      301 caatacacag tagggcccct catagagttc atcggctgcc acataacccg aaaacgactc
      361 aagggcccag tccagaaagg cgcggtccat ctgtcggtgc gccttttttc cccccggcct
      421 cgacccagtt ctggatcgtg gcaaagggga caaagacccg gtgatcgcgc cataggtgcc
      481 aactggcggg acgatacggt aagccgtctt ccaccactaa gcgcaccgcc aactggatca
      541 ctcgacgggt gtaatgactg ccgggtaagg ccagatcgga gagatcgaca ttgaaatact
      601 tgcgacactt ggagcagtag tgcgacgaat acgtcaccaa gagatcaatc ggacgcccgg
      661 tttttaagtc acccaggtca tgcaaggtac gttggccgga tttgtggcga taggccagat
      721 gcccacatct caggcaagga ctatggtcgt agttgtggtc gtcgggcatg acaatgggct
      781 tgggcaaatc gttgacatcg acgatgctct cggtgggatc ggggacgtat tcaccgggtc
      841 cgaacatggt atgtctcctg agaagaaggg tcggacaggt agtgtagaca aactgggcca
      901 agacgtggtt tacatcagct cgaacttaag acgactggat atccgaaccc ttttgcaaaa
      961 tcccttcgtt gttattaaaa ggcttacagg gttctaggcc ttgaaaaatc cagtcacact
     1021 aaatccgagc tggcgtaaag gaggtcgtgg ccagctttgg tgtagacgcc gtctctggcc
     1081 ttgtctaccc tgatctcaga agccttgcta cagtgtcaaa aacgaggggg atactgttgg
     1141 cgaacctcaa ggctttattt ttcaa
//
LOCUS       DASQSL010001371         5333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_24465, whole genome shotgun sequence.
ACCESSION   DASQSL010001371 DASQSL010000000
VERSION     DASQSL010001371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 5333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5333
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24465"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            181..2490
                     /locus_tag="VE844_14090"
     CDS             181..2490
                     /locus_tag="VE844_14090"
                     /inference="COORDINATES: protein motif:HMM:NF026092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching N-terminal
                     domain-containing protein"
                     /protein_id="HZC02436.1"
                     /translation="MPISIVDPRIPHRYGTGLNSYHPSRRLVYQGYTVLITSPDGIFT
                     GGGREGLYDFDTRILSQWHTTLAGQRPDYVASATLESHRWLAHLRVPRSGGQAAGPRL
                     PQDALELVISRRVGCGMEERLIVSNHSMVPVETELTIELDADFADVQETGGSRLQQGT
                     MEVGWDAISRALLFDYHVAHQERRLRRALRVRVVTADSEPACTGRILRFPLRLAPRGQ
                     WRGTLHYDSWVDGAWREPPPELPDSNTERDRLHARWREQRARLECVHPVLGPAFEQAA
                     EDLFALRNFELDEGPDAWIPNAGVPTYTGLFGRDCLTAAYQGALLGPEMLRGTLARVA
                     ATQAREDSAWHDEEPGKMIHEMRRGPLAELEIIPQRAYYGTQTTPAMFVLALSEYWHW
                     TGDTRTLQRYVEAALRTFEWAARYGDRDGDGFLEYVKRSPKGLKNHAWKDSDEAIRYP
                     DGRLVENPIATVEEQAFHFIALSRMAEVLVALGEEVRAEELLHCARQLKRRWHAAFWV
                     AEDGFYAMALDAEKRPVRSIGSNPGHALGVGLVPREQARIVADRLMAPELFSGWGVRT
                     LSTQHPAYNPYGYHLGTVWPVENATFALGFKRYGLDGHLERLVTGLFSAAGHFQDLRL
                     PEALGGHALDQSPVPTLYPMSNSPQAWSASATVQLVQTLLGLYPFAPAQTLTLVRPRL
                     PAWLDAVTVRRVRVGDARVSIRFEREADGRAAHEVIERKGTLHIITVPPPEDVNGKTS
                     WLDTIKEWALEHAPGRLARAARIAFGKLD"
     gene            2718..3710
                     /locus_tag="VE844_14095"
     CDS             2718..3710
                     /locus_tag="VE844_14095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006432937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HZC02437.1"
                     /translation="MALHRPEVVVITGASSGVGRATARAFASRGACIGLLARGRDGLE
                     GARKDVEERGGKALVLPTDVAQADQVEAAAVAVEAALGPIDIWINNAMTSVFSPLKEM
                     TAEEFRRVTEVTYLGYVYGTLAALQRMFPRDRGTIIQVGSALAYRGIPLQSAYCGAKH
                     AVQGFTESLRCELLHEGSHIRLTMVQLPALNTPHFRWVRNRLPYKPQPVPPIYQPEVA
                     ARAIVWASQHYRRELFVGGSTLLAIEGNKVAPGIGDRYLGRTGYRSQQTKEPADPSQP
                     DNLWEPVPGDHGVHGALDNRAHDKSLQLWATTHRGWLALVGIGALVAFAIFRLI"
     gene            complement(3887..5029)
                     /locus_tag="VE844_14100"
     CDS             complement(3887..5029)
                     /locus_tag="VE844_14100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002808584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HZC02438.1"
                     /translation="MTSANTDLALVMAGGGARAAYQVGFLRCIVRRYPDLNIPIITGA
                     SAGALNAVFLANHTGRFRDKVEDLAAIWAGLTPEQIFRVDPYSIARSVLAWGLRVLMG
                     KASRAISVRSLLDSSPLHALLERVLRPVEGRLLGIEHNLSSGNLKALAITASNYYTAQ
                     SVTWVQGKEIVGWERAHRVSVLCPITLNHVLASASLPFFFQAECIDGHWYGDGGMLLT
                     APLSPAIHLGASRILAISTHVKGSASKPSPYDSNPYPPPAQIAGALYNTIFLDMFDPD
                     TLRLERINELVVSIPESERRGLRPVNLTLFRPSRNLGELANPFEPKLPPAFRFMTRGL
                     GTKETRCNDLLSLLMFQPDYLKALIDLGCTDAEARQDEIAALLSRF"
     gene            5142..>5333
                     /locus_tag="VE844_14105"
     CDS             5142..>5333
                     /locus_tag="VE844_14105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02439.1"
                     /translation="MSVRPTGHFSRELGVKFPRPPGIEATFDGLFGQKPLVLRRGRLR
                     RARQFIVVTALRSLEPLGHL"
BASE COUNT         1018 a         1626 c         1565 g         1124 t
ORIGIN      
        1 gggtaaacgg tttgaggcgg catgtaactg ggccacggtc gttaccctcc ctcccccgtc
       61 aagggtgagg gaattaagaa tttggcaagg ggctcaatgt atagatagca atttaggtta
      121 agtagcagga ggggtgataa acgaggcccc cttgcaggcc atggtattcg caatgaggtg
      181 atgcctatct cgatcgtcga tccgcgcatt ccccaccggt atggcaccgg ccttaactcg
      241 tatcacccgt cccgccgcct cgtgtaccag gggtataccg tactgatcac gagccccgat
      301 ggcatattca ctggtggggg acgtgaggga ctctacgact tcgacacccg catcctctcc
      361 cagtggcata ccacgctggc tggccaaagg cctgactatg tcgcgagcgc cactctggag
      421 agccatcgtt ggttggccca tctgcgcgtg cctcgtagcg gtggccaagc agccggacca
      481 cggcttcccc aagatgcgct cgaactcgtc atctcccgcc gggtcggctg cggcatggaa
      541 gagcgcctca ttgtgagcaa ccatagcatg gtgccggttg agaccgaatt gaccattgag
      601 ctcgacgcgg attttgccga tgtacaagag accggtggtt cacgtctgca gcagggcacg
      661 atggaggtgg ggtgggacgc gattagccgc gcgctcttgt ttgactacca cgtggcgcac
      721 caagagcgaa ggctccgccg cgccctacgg gtgcgcgttg tcacggccga ctcggagccc
      781 gcctgtacgg gacgtatctt gcgctttccc ttgaggcttg caccgcgcgg ccaatggcgt
      841 ggcacactcc actacgactc gtgggtagac ggcgcatggc gggagccgcc tcctgagttg
      901 cctgactcca acaccgagcg cgaccgctta catgcgcgtt ggcgcgagca gcgtgcacgc
      961 ctcgagtgtg tccatcctgt gctcggaccg gccttcgagc aggccgccga agacttgttc
     1021 gcgctgcgca acttcgagct tgacgaaggc cccgatgctt ggatccccaa cgcgggcgtg
     1081 cccacctata cgggcctctt cggccgcgat tgcctaactg ccgcctatca gggggcgctg
     1141 ctcggcccgg agatgctgcg tggaacgctc gcccgggtcg ccgccaccca ggcaagggaa
     1201 gactcggcgt ggcatgatga agaaccgggg aagatgatcc acgagatgcg gcgaggtccc
     1261 cttgcagagc tcgagatcat cccccagcgg gcctactatg gtacccagac aacgcccgcg
     1321 atgtttgttc tggcactctc ggagtactgg cactggacag gtgacacccg cacgctgcag
     1381 cgctatgtgg aggccgcact ccgcaccttc gaatgggcgg ctcgctacgg tgatcgcgat
     1441 ggtgacggtt ttctcgagta cgtgaaacgc tcacctaagg gactgaagaa tcatgcctgg
     1501 aaggattccg atgaggccat ccgttaccca gacggtcgcc tcgtcgagaa cccgatcgcg
     1561 acggtggagg agcaggcctt tcacttcatc gcattaagcc gcatggcgga ggttctggtc
     1621 gccctcgggg aggaggtccg cgctgaagag cttttgcact gcgcgcgtca actcaagcgc
     1681 cgctggcacg ccgccttctg ggtcgcggaa gatggcttct acgcgatggc cctggacgct
     1741 gagaaacgtc ccgtgcgctc gatcggctcc aatcctgggc acgccttggg cgtcgggttg
     1801 gtcccgcgcg agcaggcccg catcgtagcc gaccgcctca tggcacctga gctcttctct
     1861 ggctgggggg tgcgcacgct ctccacccag caccccgcgt acaaccccta tggctaccat
     1921 ttaggcacgg tctggccagt ggagaacgcc acctttgccc tgggcttcaa acggtatggc
     1981 ctggacggcc acttagagcg cctagtcacc ggcctcttct ccgcggccgg ccatttccaa
     2041 gacctgcgct tgcccgaggc cctgggcggc cacgcgctag accaatcacc tgtcccgacc
     2101 ctctatccga tgtccaatag tccccaggcc tggagtgcca gcgccactgt gcagttggtg
     2161 cagaccctcc tcggcctcta cccgttcgcc ccagcccaga ccctcaccct ggtacggcca
     2221 cgcctgccgg catggctcga tgccgtcacg gtcaggcgcg tacgcgtggg cgatgccagg
     2281 gtctcgattc gctttgagcg cgaggccgat ggtagggccg cacacgaggt gattgagcgc
     2341 aagggcaccc tacacatcat cactgtacca ccacctgagg acgttaacgg gaaaacgagc
     2401 tggttggata ccatcaagga gtgggcgctc gaacacgcgc ccggtcgtct ggccagggcc
     2461 gctcgtattg cttttggaaa actcgattga cttgctgctc attctcggtt gcttcctcat
     2521 gccagttttt caatatacgc aacctcctag cgcagatccc tacgcaattg ttacggccac
     2581 ccttgtaatc ttttccgctc atgtccgttt atcaaccgca ttctgcccat aagatgcgct
     2641 tctacagcac cttctaactt ggcctagaaa gtgccaattt atagttggtc gattcctcgc
     2701 aattcgatag catccgtatg gcactccata ggccagaagt tgttgtgatc acgggcgcct
     2761 cgtccggcgt cggccgggcc actgcccggg cctttgccag ccgaggggcc tgtattgggc
     2821 tattagcgcg gggacgcgac ggactggaag gtgcccgcaa agatgtggaa gagcgtggtg
     2881 gtaaggccct ggtgctgccc acggatgtgg cccaggccga tcaggtggaa gcagcggcgg
     2941 tggcggtcga ggccgcattg ggtccaatcg atatctggat caacaatgcc atgacctcgg
     3001 tgttttcacc cctaaaagaa atgacggcag aggagttccg ccgcgtgacc gaggtgacct
     3061 atctcggcta tgtctatggc accctggccg ccttgcagcg catgttcccc cgcgaccgcg
     3121 gcaccatcat tcaggtaggc tctgcgctcg cctatcgggg cattccctta cagtcggctt
     3181 attgtggtgc caagcatgca gtccaggggt ttaccgagtc tctgcgttgt gaattacttc
     3241 atgaaggcag ccatatccgt ctcaccatgg tgcagctgcc cgcgctcaac accccccact
     3301 ttcgctgggt caggaaccgc cttccctata agccccaacc ggtaccgccc atctaccagc
     3361 ccgaggttgc ggccagagcg atcgtctggg cctcgcagca ttaccggcgc gagttattcg
     3421 tgggtggatc gaccctgctc gcgattgagg gcaacaaggt tgcgccgggg atcggggatc
     3481 gctatctcgg ccgcacgggc tatcgctcgc aacaaaccaa ggagcccgct gacccgagtc
     3541 agccggataa cctgtgggaa cccgttccag gcgatcatgg cgtgcacggc gcactcgata
     3601 atcgggccca tgataagagt ctacagctat gggccaccac gcatcgcggt tggcttgcct
     3661 tggtggggat aggagccctc gtcgcattcg cgatttttag attgatttga ctggattccc
     3721 cctgaggttg gttgtaagaa ttacctccta ggagtgtaaa aattgcaagg cctcgccgca
     3781 tagggccacc ctctggcgcc gtggtgggtg tgccctcgtc ctatcgctca gctcgtgatt
     3841 tcttatcgcc tcgaaacgga agctactcga aaatgtactt ggactgtcaa aatcggctca
     3901 gaagcgctgc aatttcgtcc tggcgtgctt ccgcatcagt gcagcccaga tctatcaagg
     3961 ctttcagata atccggctga aacattagca agcttaataa gtcgttgcaa cgcgtttctt
     4021 ttgtgcctaa gccacgcgtc atgaagcgaa acgcgggcgg aagcttaggc tcgaacggat
     4081 tcgccagttc tcctaagttt cgggacggtc gaaacagcgt cagattgact ggacgcaggc
     4141 cacgacgttc gctctccggg atcgaaacga ctagctcatt tatcctttcc aggcgtagcg
     4201 tgtcagggtc aaacatgtcg agaaagatcg tgttgtatag tgctcctgcg atttgggcgg
     4261 gtggaggata gggattgctg tcgtatgggc tcggctttga tgcactaccc ttaacgtgcg
     4321 tcgagatcgc gagtattcgg ctggctccga ggtgaattgc gggcgatagt ggggctgtca
     4381 ataacatccc accatcgccg taccaatggc catcgatgca ttccgcttgg aagaaaaacg
     4441 gcagcgaagc cgatgcgagt acgtgattta acgtgatcgg gcataacacg cttactcggt
     4501 gcgctcgttc ccatcctacg atttccttcc cctgcaccca tgttaccgat tgcgcggtat
     4561 aataattgga agcggtgatc gccagtgcct ttagatttcc cgaactgagg ttatgctcga
     4621 ttcccagcag tcggccctca acaggtcgta gcaccctttc cagaagcgca tgtaaggggc
     4681 tactatcgag aaggctgcgc acactgatcg cgcgtgaggc cttacccatc aagacccgaa
     4741 gcccccaggc caggacactg cgtgcaatgg agtaaggatc cacgcggaag atctgctctg
     4801 gtgtcaaacc cgcccagatt gcggccaagt cttctacctt gtcgcgaaag cgaccagtgt
     4861 ggttcgcgag gaatactgca ttgagagccc ccgcggaggc gcccgttatg atgggtatat
     4921 tgagatcggg atatctccgt acgatacagc gaagaaatcc cacctggtag gctgcgcgcg
     4981 ccccgccacc cgccatcacc agcgcgagat cagtgtttgc tgaggtcata ttaccgtctt
     5041 tccacagtgc cgtgctccgc gcgtttcacg tcgttccaac atggggacgc tgctcatcca
     5101 gcacctccca ccagcagacg gctcttgatc tcgtctcgga tgtgagcgtc cgtccgaccg
     5161 gacatttctc gcgtgagctc ggcgtcaagt ttcccaggcc cccaggcatt gaggccacct
     5221 ttgacggtct gttcgggcag aaaccgctag tgctacggcg aggtcggcta agaagggctc
     5281 gccagtttat cgtagtcact gctctgcgat cgcttgagcc tctcggtcat ctt
//
LOCUS       DASQSL010001372         1093 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_115538, whole genome shotgun sequence.
ACCESSION   DASQSL010001372 DASQSL010000000
VERSION     DASQSL010001372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1093)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1093)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115538"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(302..871)
                     /locus_tag="VE844_14110"
     CDS             complement(302..871)
                     /locus_tag="VE844_14110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1003 domain-containing protein"
                     /protein_id="HZC02440.1"
                     /translation="MTHQSPLPHGSDRPGMTHIMERNIRALLERRRQEEQDASWQDRL
                     ARRITFFTGSLRFVYLHLALFGLWVVINLPWVPLPHFDPTFVVLAMVASVEAIFLSTF
                     ILITQNRMTAQAEKHADLDLQISLLAVHEITRLITLVTGIAARLGIDAAQDPELAELA
                     QDVVPEQVLDTMEAQQHKVSNDEGQRHAS"
BASE COUNT          221 a          308 c          336 g          228 t
ORIGIN      
        1 cagagctggt cttctgaggt gcttctcgga caggagtgac ttccgctatg gctgaatcga
       61 cgacctgaat tctcagtgtg gtgcgtgggc cgctgcagcg taggggaaaa gacaagagga
      121 ataatgagct gggcgattcg cctggcgcca atagccaccg acacatctcc tatgacctcg
      181 gcggcaggaa tgtatgatgt ctctgataag ggtatcaaag tgataagtat tctgcatcgg
      241 ctcttttcat tctgagacaa gaccggccca cctttccttt cgcgacggct gcgagcggtg
      301 ctcatgaggc atgcctctgc ccttcatcgt tcgagacctt atgctgctgg gcctccatgg
      361 tgtccagcac ctgctccggc acgacatcct gcgcgagttc ggccaactct gggtcctgcg
      421 cggcgtcgat gcctaggcgg gcggcgatgc ccgtcactag cgtgatcaga cgggtgatct
      481 catgtactgc caggagactg atctgcaggt ccagatcggc atgcttctcc gcctgcgctg
      541 tcatgcggtt ctgggtgatt aggataaatg tcgataggaa aatggcctcc accgaggcca
      601 ccatggccag caccacgaat gtggggtcga agtgtggcag cggcacccag ggtaggttga
      661 tcacgaccca caggccgaag agggcgagat gcagatagac aaagcgcaga ctgccggtaa
      721 agaacgtgat gcgccgggcc aaccggtcct gccagctggc gtcctgttcc tcctggcggc
      781 ggcgctccag gagggcgcgg atgttgcgct ccataatatg ggtcatcccg ggccggtcgc
      841 tcccatgggg taatggagat tgatgagtca tgcacctcct tttagttgcg ccagtcgcac
      901 caagcgctct cgcctgccaa aggaccaagc ctcctcagat tgtcttgaca ctcatgggga
      961 gtgaaactgc gtgatcctgg tgttcaccag cgcgagcagg agcaattgcc atgccggaga
     1021 agggtcacga ggactgcaac gcctgggagg atcgggacca tacgccacct cgccctctgc
     1081 ctgtattagt gaa
//
LOCUS       DASQSL010001373         1011 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_197705, whole genome shotgun sequence.
ACCESSION   DASQSL010001373 DASQSL010000000
VERSION     DASQSL010001373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197705"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..111)
                     /gene="rplC"
                     /locus_tag="VE844_14115"
     CDS             complement(<1..111)
                     /gene="rplC"
                     /locus_tag="VE844_14115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003027202.1"
                     /note="binds directly near the 3' end of the 23S rRNA,
                     where it nucleates assembly of the 50S subunit; essential
                     for peptidyltransferase activity; mutations in this gene
                     confer resistance to tiamulin; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HZC02441.1"
                     /translation="MALGTIGRKCGMTHLFAEDGSTLPVTVIEVSPNWVTQ"
     gene            complement(126..437)
                     /gene="rpsJ"
                     /locus_tag="VE844_14120"
     CDS             complement(126..437)
                     /gene="rpsJ"
                     /locus_tag="VE844_14120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020159205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HZC02442.1"
                     /translation="MNEQIIRIRLKSFDHRLIDQSTREIVETAKRTGAQVKGPIPLPT
                     KKERFTVLTSPHADKDARDQFEIRTHKRLLDIVNPTDKTVDALMKLDLAAGVDVQIKL
                     S"
     gene            complement(442..>1011)
                     /locus_tag="VE844_14125"
     CDS             complement(442..>1011)
                     /locus_tag="VE844_14125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010946066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /protein_id="HZC02443.1"
                     /translation="PVDQSFLLPIEDVFSISGRGTVVTGRVERGKVKVGEEVEVVGIR
                     ETQKTTCTGVEMFRKLLDEGRAGDNVGVLLRGTKREEVERGQVLCKPGSVKPHTHFEA
                     EVYVLSKEEGGRHTPFFSNYRPQFYFRTTDVTGAVELPAGVEMVMPGDNIKLVVKLIA
                     PIAMEEGLRFAIREGGRTVGAGVVARIIE"
BASE COUNT          212 a          358 c          219 g          222 t
ORIGIN      
        1 ctgggtcacc caattgggcg atacctcaat cacggtgact ggaagggtgc ttccatcctc
       61 cgcaaatagg tgtgtcatcc cgcattttcg accaatagtc cccaaagcca tggataatcg
      121 tcccttcagc tcagcttgat ctgaacatcg acacccgcgg caagatcgag tttcataagt
      181 gcatccaccg tcttatctgt tgggttgaca atgtccaata agcgtttatg ggtgcggatc
      241 tcgaactgat ctcgcgcatc tttgtcggca tgaggtgagg ttaacacagt aaaacgctcc
      301 tttttcgttg gcaacgggat cggacctttt acctgcgctc cagtccgctt cgcagtctcc
      361 acgatctctc gggtggattg atcgatgagc cgatggtcaa aagacttcaa gcgtattcga
      421 atgatctgtt cattcattgc attattcgat gatccgcgcc accacgccgg cgcccactgt
      481 gcggccgcct tcccggatcg caaaccgcaa accctcctcc atcgcaatcg gcgcaatcag
      541 cttcaccacg agcttgatgt tgtcccccgg catcaccatc tcgacccccg ccggtaactc
      601 caccgccccc gtcacatcgg tcgtccgaaa ataaaactgc ggccggtaat tggaaaaaaa
      661 cggcgtgtgc cggcccccct cctctttcga taacacatac acctccgcct caaaatgggt
      721 gtgcggcttc acactcccgg gcttgcacaa cacctgcccg cgctccacct cctcccgctt
      781 ggtgccccgc aacaacaccc ccacgttgtc ccccgcccgc ccctcatcga ggagcttccg
      841 aaacatctca accccggtgc aggtggtctt ctgcgtctcc cggataccca ccacctccac
      901 ctcctcccca accttcacct tgccccgctc gacacgccct gttaccaccg taccccgtcc
      961 tgagatcgaa aacacgtcct caatgggcag caaaaacgac tggtccaccg g
//
LOCUS       DASQSL010001374         1082 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_160152, whole genome shotgun sequence.
ACCESSION   DASQSL010001374 DASQSL010000000
VERSION     DASQSL010001374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160152"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(177..878)
                     /locus_tag="VE844_14130"
     CDS             complement(177..878)
                     /locus_tag="VE844_14130"
                     /inference="COORDINATES: protein motif:HMM:NF033558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HZC02444.1"
                     /translation="MRVCPKCQSDHLVSNGSTAGKPKKRCQQCGSQVTRTTPRGKPLN
                     TKINAVLCYLSGISMNRIAFLLRVSAQSVLNWIRVFAKAHDEKPELTGRTIILELDEM
                     WHYLKKKRQKLWIWNALDRGTGQLLDWECGRRDKATLRKLVDRLAQWDVKVYCTDKWA
                     TYASVIPQDKLVQSKAMTHDIERNHCRQRHWFGRFKRQSIIVSKSKEMVHLTRALFAK
                     FWVNGNQDELVSLLD"
BASE COUNT          220 a          312 c          306 g          244 t
ORIGIN      
        1 catccgcctg gtgtctacgc gatggttcta accatatgat gttgaaggtg atcaactgaa
       61 cgttaataac ttgtagcgta ccagcaataa gcccgtcggg gcaagcacaa atgcgcgatc
      121 ctatttcgtg aggagtttgg gcgtcgggat gaaaccctat aggcagtagg agggtttcaa
      181 tcaagtagtg atacgagttc atcctggtta ccattgaccc agaacttggc aaagagggct
      241 ctggtgagat gcaccatctc cttagacttc gagacaatga ttgactgacg cttgaaacgt
      301 ccgaaccagt gacgctggcg gcagtgattg cgctcgatgt catgcgtcat cgctttactc
      361 tgcaccaatt tgtcctgggg tataaccgag gcgtacgtgg cccatttgtc tgtgcaatac
      421 accttcacat cccactgggc caggcgatcg accagcttcc gcaaggttgc cttatcccga
      481 cgcccacact cccagtccag cagctgtccg gtgccccgat ccagagcgtt ccagatccag
      541 agtttctgcc gttttttctt gagatagtgc cacatctcat ccagttccag gatgatggtt
      601 ctccccgtga gttccggctt ctcgtcgtgc gccttggcaa agacccggat ccagttgagt
      661 accgactggg ctgagacccg gaggagaaac gcaatacggt tcatggagat gccactcaga
      721 tagcacagca cggcgttgat cttggtgttg aggggtttgc cgcgcggggt ggtgcgggta
      781 acctgagagc cacactgctg acagcgcttc ttaggtttgc cggcggtcga gccgttgctg
      841 acgaggtgat cactctggca cttgggacag acacgcatcg ccgtcctccc cctcggacat
      901 gggcatacct gtccgaaggg gggagtataa cagggtgcga gacgtagaca atcactactt
      961 ggttgaaacc ctcctcgtca ccctcaccct cggcctcctc gtggggctgc aagcagctga
     1021 cgcaccgccg acggtggccc gcgtcgggat gctcaccgcg ggctccggcc tccccgccct
     1081 gc
//
LOCUS       DASQSL010001375         4101 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_132706, whole genome shotgun sequence.
ACCESSION   DASQSL010001375 DASQSL010000000
VERSION     DASQSL010001375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4101
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132706"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(196..816)
                     /locus_tag="VE844_14135"
     CDS             complement(196..816)
                     /locus_tag="VE844_14135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012645687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZC02445.1"
                     /translation="MKTLAYLRVSTGSQDVAKQKFAILDYAQQQGISIDEFIEAQISS
                     RQTIEKRGIDDVLKHLSAGDRLIVSELSRLGRSLGQIIYIVDTLVKRNIRFVAIKETI
                     RFEGKQTMQTKVMVALFGLFAEVERDLISERTREGLIAAKAKGKLLGRPRGSLGRSKL
                     DGKELEIQTLLDKKVSKASIAKIMGISRTALYNFIRTRGLDKHLNG"
     gene            940..3867
                     /locus_tag="VE844_14140"
     CDS             940..3867
                     /locus_tag="VE844_14140"
                     /inference="COORDINATES: protein motif:HMM:NF033527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3 family transposase"
                     /protein_id="HZC02446.1"
                     /translation="MQCSYSRKQLIEAASLTEDDLQEVSRCRGAHNRLGFGYQLGFVR
                     LFNRFPAQQPFEVTDEIVTFVGVQLGIDRTLIADYSNHRDAISDHQIRIRDYLKLGHL
                     GEVEMQNLEAFLFEEACRLEHTAALQARVQNYLKAQRILLPAESTLIRIIGEQRQRAR
                     ERIYERITADLPGKLAGVLDELLQVPLGEKASPLQRIKANPRNPSPEAMLVLLQKLQL
                     IETTGILQVDLSWLSGNYQRALFHYVNQCSVDRLREVVQPRRNAALMCFLWQSYRDAV
                     DQAVDMYDKLITWVHTQAETDLDEQLRQQRKALRSSLATLKSLGAIILDEQIADVELR
                     ARLFEEVPRDELAAQVEALDDWVTGKKSDAFYGVISRFSYLRRFAPPFLHALEFKSET
                     GGDNPCLEALAVLKELNAANKRTLPADVPTAFVPKALQRFIRDQSGKLQKSAWECALL
                     TQIKEDIRAGNLSVGYSKRFGRFDDFFISDAQWAPLREGFFQRAGLPQDPAEVPNYLQ
                     RRLNNAYDRFLASAPSNHYAIADESGWHLSVDPTEKLDPLNERQLDELKEWLASHMRW
                     IKLPELLIEVDNELGFTHHFMTPAQRQNRSVDDVCTVLAAVMAHGCNIGLYTMAQLVQ
                     GIGYKSLKRVSDWQLTEETQRAALTALVSAISGLDTSATWGAGKTSASDGQRFALPRR
                     VLQRTYSSRIRDFALEFYTFLADNYAPYYTMPVECTDRDAPFVLDGLLYNETDLDLEE
                     HYTDTHGYIEVNFTAFNLLGKRFYPRIRGLQRQRIYRIDPERDYGMLTALVDRTDSTI
                     DTAFIAEHWDRMGQFYASLEQGHTTASVALKRLAGFTTKNRFYRANRDLGRIFKTEFI
                     LKYMSEPQLRRRIRRGLLKVDQLHALARDVYYGRRGRINAHELHEQMNSCSCLTLILA
                     CIIYWQAREIDRVLNECDPQSNGINVSLLEHVSPIEWENVVLYGEYVINRDLIRSAVL
                     LNT"
     gene            complement(3900..>4101)
                     /locus_tag="VE844_14145"
     CDS             complement(3900..>4101)
                     /locus_tag="VE844_14145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02447.1"
                     /translation="PDAETIRTYFNEQLRVEDLPDLAKRVNAALAAEIPERVRRRACE
                     IAIDLHDRPYYGYYQDLCNFAG"
BASE COUNT          903 a         1174 c         1095 g          929 t
ORIGIN      
        1 tattcatact ttccccctcg tgtttaattt cagtagttcc aagttttcct aattggttga
       61 gtgcgtccca ttggacgagc gcatcgactc tccttaatac taagtgtccc aataacttag
      121 ccggagagac cgatgcgccc accttattgg ggtactacca agatccgtgt aattttgcgg
      181 gataagtgtt gccttctagc cgttcaagtg tttatcaagg cctctcgtgc ggatgaaatt
      241 gtaaagggcg gttctagaga tccccataat tttagcaatc gatgccttcg acaccttctt
      301 atccagaagc gtctggatct ccagttcttt accatcgagc tttgatcgac ccagtgaacc
      361 tcttgggcgg ccgagaagct ttcccttagc cttagccgcg ataagcccct cccgagttcg
      421 ctccgagatt aaatcccgtt caacttccgc gaacagacca aatagggcga ccatgacctt
      481 agtctgcatg gtctgcttac cctcgaagcg gatggtctcc ttaatggcga caaaacggat
      541 gttgcgtttt accaaggtat ccacgatgta gatgatttgg ccaaggcttc tacccagtcg
      601 ggacagttcg ctcacaatca gtctatcgcc cgcacttaag tgcttaagca catcatcaat
      661 gccccgtttt tctatcgtct gccgggaaga gatctgagct tcgatgaatt catcgatcga
      721 aatgccctgt tgctgggcat aatcgaggat ggcgaatttc tgcttggcta cgtcctggga
      781 gccggtagaa acgcggaggt aagcaagggt tttcatcgag tgtctataaa aacctaaaag
      841 caatttttta ttttacgtta aacggctatc tttcccagcc gttttcgtag tctattatcg
      901 tctatagtga cgctcgtttt cttatgacgg atgttactca tgcagtgctc ttattcgaga
      961 aaacagctta tcgaagcggc ttcgctcacg gaggacgatt tgcaagaagt ttcccggtgt
     1021 cggggagctc acaaccggct tggttttggc tatcagcttg gctttgtccg tctctttaat
     1081 cgctttcctg cgcagcagcc tttcgaggtc actgatgaga tcgtcacctt tgtgggtgtg
     1141 cagctgggga tcgataggac actcatcgcc gactatagca accatcggga cgccatcagc
     1201 gatcatcaga ttcggatccg cgactatcta aagctaggtc atctcgggga agtggaaatg
     1261 cagaacctcg aagcgttcct gtttgaggag gcctgccgat tagagcatac tgcggccttg
     1321 caggcccggg tgcagaacta cctgaaagcg caacgcatct tgctgcctgc ggagtcgacc
     1381 ctgatccgta tcattggtga gcaacggcag cgggcgcggg agaggatcta tgagcggatt
     1441 acggccgact tgccgggcaa gctcgccggc gtgttggacg agctgttgca agtccccctt
     1501 ggcgaaaagg cctccccttt gcagcggatc aaagccaatc cgcgcaatcc ctcacccgaa
     1561 gcaatgctgg tgctgctcca aaagctccaa ctcattgaga cgacaggcat attacaggtc
     1621 gatctgtcgt ggctcagcgg taactatcaa cgggcgctgt tccactacgt caatcaatgc
     1681 tccgtcgacc gcttgcggga ggttgtccaa ccgcgacgta acgcggcgct gatgtgcttt
     1741 ctctggcaaa gctaccgcga tgccgtcgac caagccgtgg atatgtacga caaactcatc
     1801 acctgggtgc acacgcaggc cgaaaccgat ttggatgaac agctgcgcca gcaacgcaaa
     1861 gccctccgca gctcgttggc cacactcaaa tcgctcggcg caatcatcct cgacgagcag
     1921 atcgccgacg tcgagctgcg ggcacggcta ttcgaggaag taccacgcga tgagctggcc
     1981 gcccaggtgg aggcgctcga tgactgggtc accggcaaga aaagcgacgc tttttatggc
     2041 gtcatcagcc ggttcagtta cttgcgtcga tttgcaccgc cgtttttgca cgcgctggag
     2101 tttaagtcag aaaccggcgg tgacaatccg tgtttggagg cgctagcggt gctgaaagag
     2161 ctgaatgccg ctaacaaacg cacgctgccg gccgacgtac caacagcatt cgtgccgaaa
     2221 gcgctacagc gctttatccg ggatcagagc ggcaagcttc agaaatcggc ctgggagtgc
     2281 gcgctgctca ctcagattaa ggaggatatc cgcgccggca atctctcggt gggctacagc
     2341 aaacgctttg gccggttcga tgatttcttc atctcggacg cacaatgggc accgctgcgc
     2401 gaaggatttt ttcagcgcgc tggcctgcca caggacccgg ccgaggtgcc caactatctc
     2461 cagcggcgac tgaataacgc ctacgatcgc ttcctcgcat cggcgcccag taatcactat
     2521 gccatcgccg atgagagcgg ctggcacctc tcggtcgacc caacggaaaa gcttgacccg
     2581 ctcaatgaac gccaactgga cgagctgaag gaatggctcg cgagccacat gcgttggatc
     2641 aagctgccag agctgctgat cgaagtcgac aacgaactcg gcttcaccca ccatttcatg
     2701 acgccggcgc agcggcaaaa ccgaagcgtc gatgacgtct gcacggtgct ggccgcggtg
     2761 atggcccacg gctgcaacat cggcctctac accatggcgc agttggtgca gggcattggc
     2821 tacaagtcac tgaaacgcgt cagcgattgg cagctgaccg aggagaccca gcgcgctgcg
     2881 ctcaccgcac tggtctccgc catctcggga ctggacacct cggctacctg gggtgcgggc
     2941 aaaacctcag ccagtgatgg tcagcgcttt gcgctgccgc gccgggtgct gcaacgcact
     3001 tatagctccc ggatcaggga cttcgcgctg gagttttaca ccttcctcgc cgataactac
     3061 gcgccgtact ataccatgcc ggtcgagtgt acagaccgcg acgccccttt cgttctggac
     3121 ggcttgctgt ataacgagac agatctggat ctcgaagagc actacaccga tacgcacggc
     3181 tatattgagg ttaatttcac tgctttcaat ctattaggta agcgtttcta cccgcgcatc
     3241 cgggggctcc agcgccagcg catctaccgc atcgaccctg aacgcgatta tggcatgttg
     3301 actgctctgg tcgatcgcac cgacagtacg atcgacactg ctttcatcgc cgagcactgg
     3361 gatcgcatgg ggcaattcta tgcctcgctg gagcagggtc acaccaccgc ctcagtggcg
     3421 ctgaagcggc ttgcaggctt caccactaaa aaccgcttct accgcgccaa tcgggacctg
     3481 ggacggatct tcaaaaccga gttcatcctg aagtacatgt cagaacccca attgaggcgc
     3541 cgcatccgac gcgggctgct caaggtcgat caactccacg ccctggcccg cgatgtctac
     3601 tatggccgcc gcgggcgcat caacgcccat gaactgcatg agcagatgaa ctcctgcagc
     3661 tgcttgacgc tgatcctggc ctgcattatc tactggcagg ccagagagat cgaccgtgta
     3721 ttgaatgaat gcgatccgca gagtaatggg attaacgtct cactgcttga gcacgtcagc
     3781 cccatcgaat gggaaaatgt cgtcctttat ggggagtatg tcattaatcg agacctgatc
     3841 cgatcagccg ttcttctcaa tacctgataa atatctgatc agatcagtca ggctaaggct
     3901 tatcccgcaa aattacacag atcttggtag tacccgtagt aaggccggtc atgcagatca
     3961 atggcgatct cacaggcacg gcgccgtacg cgctccggaa tctcggccgc cagtgcggcg
     4021 ttcacacgct tcgccaggtc aggcaagtct tccacgcgta gttgctcgtt gaagtaggta
     4081 cggatcgttt cggcatcagg c
//
LOCUS       DASQSL010001376         2266 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_78079, whole genome shotgun sequence.
ACCESSION   DASQSL010001376 DASQSL010000000
VERSION     DASQSL010001376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2266
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78079"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..506
                     /locus_tag="VE844_14150"
     CDS             <1..506
                     /locus_tag="VE844_14150"
                     /inference="COORDINATES: protein motif:HMM:NF033547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HZC02448.1"
                     /translation="EPGRGHDDKDRPAMIAWVSRQGRVVVQAVKDFTVKTVQKAADLA
                     VQAGSRLYTDSASSYQALPGYRHEFVNHTQQEYARGEVHENRAECLFSLLKPFLRVFR
                     GISKTNLPGYLGFFQFLRNVRHQNAFEQAELVLHAALDPAIASKARRGEFVPCFDHFN
                     LLQTPIN"
     gene            complement(542..>2266)
                     /locus_tag="VE844_14155"
     CDS             complement(542..>2266)
                     /locus_tag="VE844_14155"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006423938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HZC02449.1"
                     /translation="EEARRLLQESEGLALIKNKWVAVDKATLQQTLEAYEQVRTLLEE
                     DGLTLREALALQLSLTKQLGDKHPGVDLGVSYGTWLEDITRKLLNPQLVTAVAPAHNF
                     RATLRPYQQAGLNWLGFLDSLGFGACLADDMGLGKTIQLLAFLSVKKPQKTTSLLVVP
                     ASLIANWRHEIDRHYPELAYYVAHPGSTPTSQPAALSTEALAQYDLVITTYTMVQRYD
                     VLQTFHWDYVILDEAQAIKNPGTQQTRAVKKLQAANRIVLTGTPVENRLSDLWSLFDF
                     LNPGLLGNLKEFKSFARNLHDDPAGYGRLRQVIRPYILRRLKTDTSIISDLPDKVEMK
                     TFASLSKKQIILYRDLLDELKDFLDHSEGIQRRGLILSSLMKCKQLCNHPDQFLGTEG
                     FEEQHSGKFQRLRELCETVLEKREKMLVFTQFREITAALHDFLAGIFGRAGLVLHGSV
                     PVKQRQALIDAFQKRDTYIPFMVLSLKAGGVGLNLTEANHVVHFDRWWNPAVENQATD
                     RAFRIGQQKNVVVHKFITQGTIEEKIDAMLEEKTRMSEEVIAAGGEEWITELDNDQLI
                     DLFSLSLS"
BASE COUNT          444 a          624 c          672 g          526 t
ORIGIN      
        1 tcgagcctgg ccgtggccat gacgacaaag accggcccgc catgatcgcg tgggtcagcc
       61 gccagggtcg ggtcgtcgta caagccgtca aggatttcac cgtcaagacc gtgcagaagg
      121 cggccgactt ggcggtgcaa gcaggcagtc gactctatac ggactccgcc agcagctatc
      181 aggcgttgcc aggatacagg catgagttcg tcaatcacac gcagcaggag tatgcacgcg
      241 gggaggtcca tgagaatcgg gcggagtgcc tgttttctct gctcaagccc ttcctacggg
      301 tgtttcgtgg catcagcaaa accaacctgc cggggtacct cgggttcttt caattcctgc
      361 ggaacgttcg gcatcagaat gcgtttgagc aggctgagtt ggtcttgcat gcggccttag
      421 atccagccat cgcaagcaaa gccaggaggg gagaatttgt cccatgcttt gaccatttca
      481 acctgctaca aactccgata aattgagcga ctctattatt ttcagcagag tatccggccc
      541 tttacgagag gctgaggctg aagaggtcta tcagttggtc gttgtccagt tcggtgatcc
      601 actcctcacc gccagcggcg atgacttcct cggacatacg ggttttttct tccagcatgg
      661 catcgatttt ttcttcaatg gtgccctgcg taatgaattt gtgcaccaca acgtttttct
      721 gctggccaat gcggaaggct cgatccgtgg cctgattttc caccgccgga ttccaccagc
      781 gatcaaagtg cacgacgtga ttcgcttcgg tcaggttcag accgacgccg ccagctttga
      841 gcgacaacac cataaatggg atgtacgtgt cgcgcttctg gaaggcgtcg atgagggcct
      901 ggcgctgttt caccggtaca ctgccatgca ggacgagacc ggcccgcccg aagatgccgg
      961 ccaggaagtc gtgcaaagcc gcggtgattt ccctgaattg cgtgaacacg agcatttttt
     1021 cacgtttctc caggaccgtc tcgcagagtt ctcggaggcg ttggaattta ccgctgtgct
     1081 gttcctcgaa tccttccgta cccaggaact ggtcaggatg attgcagagc tgcttgcatt
     1141 tcatcagcga cgaaagaatc aagccgcgac gctggatgcc ttcgctgtgg tccaggaagt
     1201 ctttgagctc gtccagcaga tctcggtaga gaatgatctg ttttttgctc agcgacgcga
     1261 aggttttcat ttcgactttg tccggcagat cgctgatgat gctggtgtca gttttcaggc
     1321 gtctgaggat gtacgggcga atcacctggc gcagacggcc atagcctgcc ggatcgtcgt
     1381 gcagatttct agcaaagctt ttgaattcct tcaggttgcc cagcagaccg gggttcagaa
     1441 aatcaaacag ggaccagagg tcggacaaac ggttttccac tggcgtgccg gtcaggacga
     1501 tgcggttggc tgcctgtagc tttttgacgg cgcgcgtctg ttgcgtgccg gggtttttga
     1561 tcgcctgtgc ttcgtcaaga atcacgtagt cccagtgaaa ggtctgcaac acgtcgtagc
     1621 gttgcaccat ggtgtaggtg gtgatgacca ggtcgtactg cgctaaggct tctgtggaca
     1681 gggctgccgg ctgcgaggtc ggcgtgctcc cgggatgcgc gacgtagtag gcaagttccg
     1741 gatagtggcg gtcgatttca tgacgccagt tggcaatcag cgaggccggc accaccagca
     1801 gactggtggt cttttgcggc ttcttgacgc tcaaaaacgc cagcagctgg atggttttgc
     1861 cgaggcccat gtcgtcggcc agacaggccc cgaaccccag agaatccaaa aagcccaacc
     1921 agttcagccc ggcctgctga taggggcgca aggtcgcccg gaaattgtgg gccggcgcca
     1981 cggctgtgac cagctgcggg ttgagcagct tgcgggtgat gtcttcaagc caggtgccat
     2041 aggagacgcc aaggtccacg ccaggatgct tgtctccgag ctgtttggtg agggagagct
     2101 gcaaggccag cgcttcccgc agcgtcagtc catcctcctc caacagcgtg cgcacctgct
     2161 cgtaggcttc gagggtttgc tgcagtgtgg ctttatctac cgccacccat ttgttcttaa
     2221 tcagcgccag cccttcgctt tcttgtagca ggcgccgggc ttcctc
//
LOCUS       DASQSL010001377         1099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_78083, whole genome shotgun sequence.
ACCESSION   DASQSL010001377 DASQSL010000000
VERSION     DASQSL010001377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78083"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1099
                     /locus_tag="VE844_14160"
     CDS             <1..>1099
                     /locus_tag="VE844_14160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02450.1"
                     /translation="SKSAKALAHLYKLRDKESGGYVWGQSLVFLLLVTPKISIPVGFV
                     FYQPDPELSAWYQMEKALKKQKVPKAQRRPKPAPNPDYPTKQQLALRLLEDFKANHPD
                     IRVHCIAADALYGAAPFVEAASALFGGVQVLSQIRSNQNIRIGKREQHVADYFATHPG
                     TPQRICIRGGEEMVAMVSSARLYVCSHKTKRFVVAIKYDHEETYRYLIASDLSWRTLD
                     IVQGHSVRWLVEVFIQDWKGQEGWAQLTKQPGEEGARQSVILSLLVDHSLFVHPDQQA
                     QLKNNLPAYTVGSLRANVQVACLVDIIDDLVSSENPRDQLNRFSQALHDVFAFSRSKK
                     HMIQRQLGRLEPTPLLKYRAHEVMRNMPVMST"
BASE COUNT          258 a          318 c          286 g          237 t
ORIGIN      
        1 ttccaaatcg gccaaggcgc tcgcccatct ctataaactg cgcgataaag aaagcggcgg
       61 ctacgtctgg ggccaaagtc tggtgtttct cttgttggtg accccgaaaa tctcgatccc
      121 cgtgggcttt gtcttctatc agcccgatcc cgagctcagt gcctggtatc agatggaaaa
      181 ggccctcaag aaacaaaaag tgcccaaagc ccagcggcgg cccaagccgg cccccaatcc
      241 cgactatccc accaaacaac aactcgcctt gcgattgctt gaagacttca aggccaacca
      301 tcctgacatc cgagttcact gtatcgcggc agatgctctc tatggggcag ccccctttgt
      361 cgaggcggcc tcggccctgt tcggcggcgt gcaagtgctg tctcaaattc gcagcaatca
      421 aaacatccgc atcggcaaac gtgagcaaca cgtcgccgac tattttgcca cccatcccgg
      481 tacgccgcag cgcatctgca tccgaggcgg tgaagagatg gtggccatgg tcagcagtgc
      541 ccgcttatat gtctgctccc acaaaaccaa acgctttgtg gtggccatta aatatgacca
      601 tgaagagacc tatcgctatc tgatcgcctc cgatctcagt tggcgcacgc ttgatattgt
      661 tcagggccac tctgtgaggt ggctcgtgga ggtttttatt caggactgga aggggcagga
      721 aggatgggct cagttgacca agcagcctgg cgaagaggga gcacgccaaa gcgtgatcct
      781 gagcctactg gttgatcaca gtctatttgt tcatcccgac caacaggccc agcttaaaaa
      841 caacctgcct gcatacactg tggggagcct gcgagccaat gtgcaagtgg cgtgtttggt
      901 cgatatcatc gatgacctgg tgtcgtctga gaatcctcgg gatcagctga atcgcttcag
      961 ccaagcctta cacgacgtgt ttgcgtttag ccgttccaaa aagcacatga tccaacgcca
     1021 actggggcgg cttgaaccga caccattgtt aaagtaccga gcgcatgaag tcatgcggaa
     1081 catgcccgtg atgtcaacc
//
LOCUS       DASQSL010001378         1374 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_90482, whole genome shotgun sequence.
ACCESSION   DASQSL010001378 DASQSL010000000
VERSION     DASQSL010001378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1374
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90482"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            144..635
                     /locus_tag="VE844_14165"
     CDS             144..635
                     /locus_tag="VE844_14165"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC02451.1"
                     /translation="MYCPLPTIHDDLETLRTRLRQTRDAEQKQRLYLLVLIGEGRVKS
                     RREAADYLAVHRNSIGRWLACYEREGVEGLLRVGAGGAPAKQRTLSAAAFARLQTRLR
                     EPEGFASYGAIQQWLAEEWGEAVAYQAVHRLVHRRLKAKLKRPRPRHPKKTLALKPLS
                     RSA"
     gene            635..1213
                     /locus_tag="VE844_14170"
                     /pseudo
     CDS             635..1213
                     /locus_tag="VE844_14170"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            complement(1273..1374)
                     /locus_tag="VE844_14175"
                     /pseudo
     CDS             complement(1273..1374)
                     /locus_tag="VE844_14175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010565006.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MlaA family lipoprotein"
BASE COUNT          282 a          405 c          401 g          286 t
ORIGIN      
        1 cccgccttaa accggttttt cgttcgttgt taaagcaccc aggtaggagt aggatgagac
       61 ttttttgaga aggtcttata ccaattagtg aaaataaaga tgcataatag agataatcca
      121 tacaaacgca ggaggacatc accatgtatt gccccttacc gaccatccat gacgacctgg
      181 agacccttcg tacccggcta cgccagacga gggatgccga gcagaagcag cggttgtatc
      241 tattggtgct gatcggtgag gggcgggtga agagccgccg cgaggccgcc gattacttgg
      301 ccgtgcaccg caacagtata ggccgctggt tggcgtgcta tgagcgtgag ggggtggagg
      361 ggctgctgcg ggtgggggcg ggtggcgcgc ccgcgaaaca gcgcaccttg tcggccgcgg
      421 cgtttgcgag gctccaaacg cggctgcgcg aacccgaggg gttcgcaagc tatggcgcga
      481 tccagcagtg gctggccgag gagtggggtg aagcggttgc gtatcaagcg gtacatcggc
      541 tcgtgcaccg gcgcctcaag gctaagttga aacggccacg ccccaggcat cccaaaaaaa
      601 cactagcgct gaagccgctt tcccgcagcg cctagagcgg gcggtagcgg cactgagtgt
      661 actgggccgt gtccccgaaa cgccgcagcc tctgcgcctc ttttgccagg atgaaagccg
      721 catcggcttg catttgcctg ccgggcggcg cctgacgctg cccggggtta aacccctcaa
      781 ggtcatggcg ccactgtatc agtattattg gctctacacc gccgttgaac ccatcacggg
      841 cacggcttgc tggctggagt taccgcgact cgacagtacc tgctttcaag tctttctcga
      901 tcacttcagc cgccagtatg cagatagcct caacctcctt gtgctcgaca acgcccccgc
      961 ccatgtcgcc acagccctcg tcatcccggc caacgttgtg ctgatctact tgccgcccta
     1021 ctgtccggaa ctcaacccta ttgagcggct gtggcaagac ctgaaggggc atctcacggg
     1081 tctggccgct accgtacgcg gctcgcttag cgcagtgcgt gaagccgtcg aggggttcat
     1141 ccacgcttat agccctcaac aactcgcttc cctcaccggc tatccgtatt tgtgtaatgt
     1201 cgatttgcac tgatgtttat gcaaattggt ataatacgct gcttccccac cgacactaag
     1261 atccatatcc gtcgctagat ccagcagaat gatttcgttg agcgcgatgc catcgaatgc
     1321 taggcccgca gtatcacgca aggtgctagg cccgagcagt ggtagcacga ggta
//
LOCUS       DASQSL010001379         1013 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_170091, whole genome shotgun sequence.
ACCESSION   DASQSL010001379 DASQSL010000000
VERSION     DASQSL010001379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1013
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170091"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(450..>1013)
                     /locus_tag="VE844_14180"
     CDS             complement(450..>1013)
                     /locus_tag="VE844_14180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005983571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HZC02452.1"
                     /translation="HCAGDLELFARFVDQDLMKNLEKIANAAYVRLPYTEAVEILQRS
                     GKAFEFPITYGADLQTEHERYLTEEHLKKPVIVYNYPKEIKPFYMRLNDDDRTVAAMD
                     LLVPRVGELVGGSQREERLDRLERRMQEAGMDREGYWWYLDIRRYGTVPHAGFGLGFE
                     RFLMTVTGVTNIRDVIPFPRTPKHLEF"
BASE COUNT          199 a          299 c          296 g          219 t
ORIGIN      
        1 tgggacggga gaggtggggt tggggctaat aacacgccgc agctgactgc ctgcagcgta
       61 cgctcccgca tcgctcccgc ttcgggcagc ggctgaagca tggcgtgagc cccggcacct
      121 cgcccaacta cccggtgccc agtagctcca aattgcggtt ccccatacct tccccggtga
      181 attgaggggc agcggaagca attggatatg cgcatttcag aggcgatagc ggcctgcatt
      241 gccactgtgc accgatggcg ccgagccggg aagcctaact acgtgtttga caggcatggg
      301 ttgccagata aggccatccg gtggctgaga tgtcttcttt gagacctccc ttctacacga
      361 tggcgtacga ttcctgtctg ctctctgtga gcctgcaggg gagtcaataa tcgcttccgc
      421 tgaggcggcc catcgtcgga cattcctgtt caaaattcca gatgctttgg cgtccggggg
      481 aagggaatga catcacggat attggtcacc cccgtgacag tcatcaagaa gcgctcgaac
      541 ccgaggccga acccggcgtg cggcacggtg ccgtaacgcc gaatgtcgag ataccaccag
      601 tagccctctc gatccatgcc cgcttcctgc atccgccgtt cgagccgatc gaggcgctct
      661 tcccgctgac tgccgccgac gagttccccc acccgcggga ccagcagatc catggcggcc
      721 acggttctgt cgtcatcgtt taaccgcata taaaagggtt tgatttcctt ggggtagttg
      781 tacacgatga cgggcttttt aaggtgctct tcggtcagat agcgctcgtg ttccgtctgc
      841 aagtccgcgc cataggtgat gggaaactcg aaggctttcc ccgagcgttg taaaatctca
      901 acagcctcgg tatagggcag tcgcacgtat gcggcattgg caatcttctc gagattcttc
      961 atgaggtctt gatcgacgaa gcgggcgaag agctccaaat ctccggcaca gtg
//
LOCUS       DASQSL010001380         1869 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_160181, whole genome shotgun sequence.
ACCESSION   DASQSL010001380 DASQSL010000000
VERSION     DASQSL010001380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1869
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160181"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            242..1627
                     /locus_tag="VE844_14185"
     CDS             242..1627
                     /locus_tag="VE844_14185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02453.1"
                     /translation="MKVHPTCMPEACPGASPSVQLVQIEVSPAHPLLVLKRALPWEAI
                     TEAMTRHWRAHGKNVDGGPGLPWDVSLYVPLVVLMLIKHFDSRQMEAYLAENVVARVF
                     IGRQREVQAQIRDHSNIARAYAALGQAGIDEITHLVIQEAHRFGFVDKGVMSSDTTAQ
                     ELAIGYPNEPGILRGLAQRCGRALRGLKKRGVQGLEAALEQAQTILRSVKEHHLFTKG
                     KADKRQVLTRILTEVGELMVQTRPLVERLGTRWDRVIQSARSRLMAMHEVIKPLMGQI
                     VHWLTTGKVAANKIVHVGIPQARAIVRNKAGKKTEFGLAYLISRLGGGYVFGERITAN
                     ADERQMPLKALAGYRAIFGPKATPALVVYDRGGDSTPTRQRLALEGVRNVGIQPKGKR
                     PWSVAEAVREQIRSERGRTEGVIGTLKSNRYQFNKPKERLWQTLEMAGPRSILSFNLN
                     KLMRDLVALTR"
BASE COUNT          435 a          484 c          580 g          370 t
ORIGIN      
        1 ttaaagaatt aaaagttttt acccctccaa aaatccagtc ggcttaccga gccactggtg
       61 taaaggaggt catggccagc tttgccacgt ccctgtttaa gtagagcgtg tcgcggagta
      121 gagcctggga gaaatgcttg aggagtctcc acaggcccca aaccagcatg gacttgcccc
      181 ttcgaggtgc cttctggtat ttctggtgtt atggagacga tcaccagacc aggagcacac
      241 catgaaagtc catcccactt gtatgcccga ggcttgtccc ggggcaagtc ccagtgttca
      301 gcttgtccag atcgaggtct caccagccca tcccctactg gtgttgaaac gggccctgcc
      361 ctgggaagcc attaccgaag cgatgacgcg tcactggcgc gcccatggca aaaacgtcga
      421 tggtggacct gggttgcctt gggatgtttc cttatatgtg cccttggtgg tgttgatgct
      481 gatcaagcat ttcgattcgc gccaaatgga ggcctacttg gccgagaatg tggtggcgcg
      541 ggtgtttatt ggacgtcagc gagaggtcca ggcccagatt cgcgatcact ccaacattgc
      601 tcgggcctat gcggcattgg gccaagcggg tatcgacgaa atcacgcact tggtgatcca
      661 ggaagcgcat cgctttggct ttgtcgacaa gggggtgatg tcatcggaca cgacggcgca
      721 ggagttggcc attggctatc ccaacgaacc gggcatcttg agaggcttgg cgcagcgctg
      781 tggccgagcg ttgagggggc tcaaaaagcg gggtgttcag ggactcgaag cagctctgga
      841 acaggcgcag acgatcttgc gctcggtcaa agaacaccat ctgtttacca agggcaaagc
      901 ggacaaacgc caggtgttga cccggatatt gacggaagtc ggcgagctaa tggtgcaaac
      961 gcgcccgctt gtcgagcgtc tcggtacgcg ttgggatcgg gtcatacaga gtgcgcgctc
     1021 gcggctcatg gcgatgcacg aggtgatcaa gccgctgatg ggtcaaatcg tgcactggct
     1081 cacgacgggc aaagtggcgg ccaacaaaat cgtgcatgtg gggattccgc aagcccgcgc
     1141 cattgtgcgc aacaaagccg gcaaaaagac cgaatttggc ttggcctatc tgatcagccg
     1201 tttgggcggc gggtatgtgt ttggcgaacg cattacggcc aatgcggacg agaggcagat
     1261 gccgctcaaa gctctggcgg ggtaccgggc gatctttggt ccaaaagcca cgccggcgtt
     1321 ggtggtctac gaccggggtg gggattcgac gccgacgcgc cagcggctgg cgttggaagg
     1381 cgtgcgcaat gtggggattc agcccaaagg caagcggcca tggtcggttg ccgaggcagt
     1441 ccgggagcag attcgcagcg agcggggtcg caccgaaggg gtgattggca cgctcaaaag
     1501 caaccggtac caattcaaca agcccaaaga acgtctgtgg cagacgctgg agatggcggg
     1561 gccgaggtct atcctctcgt tcaatctcaa caaattgatg cgggatttgg tggccctgac
     1621 ccgctgaggg atgggcagca acacacggaa cagcgtcagc atagaggaga gatacagagg
     1681 gaaaagagag aaatggagga ccggatgacc tccaatgaat tctgcgacac gctctatata
     1741 atttaaaaca attcggatca aaaatgcacg aaaaaaatac cacagtctga aacaggctcg
     1801 ctattatctc cagagcgtcc cgtccaccct gcaagcgacg atcaatctgg acgaaattct
     1861 cgccttccg
//
LOCUS       DASQSL010001381         1692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_12075, whole genome shotgun sequence.
ACCESSION   DASQSL010001381 DASQSL010000000
VERSION     DASQSL010001381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1692
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12075"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..537
                     /gene="yqeC"
                     /locus_tag="VE844_14190"
     CDS             <1..537
                     /gene="yqeC"
                     /locus_tag="VE844_14190"
                     /inference="COORDINATES: protein motif:HMM:TIGR03172.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenium cofactor biosynthesis protein YqeC"
                     /protein_id="HZC02454.1"
                     /translation="AAHARVVAFAKPSIKPGRLGGLEPAEIAAIQAALTFDVILVKAD
                     GARSRRIKSPGLEEPKIPKEATTVIPVVSAHAIGEPLSERIAHRLDRLATVLNIRPGD
                     SLTANHIAQLLASDQGMLKGVGKARVVPLINGVDNPAIKQAAWKAAEQALALSSRFDR
                     VVLACMRHPNPLVGVVWR"
     gene            556..>1692
                     /locus_tag="VE844_14195"
     CDS             556..>1692
                     /locus_tag="VE844_14195"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HZC02455.1"
                     /translation="MDRFVRLRTLLFIFFIVLFLGPVLTLWACAGEPLGTTLVFMVSG
                     AFIAVLVSGGLADVLTEPVLKLTEAAQKMAQGQWSLPVTLRNHVPLEVHALVDAFNRM
                     VEQMAQVHQALQGNERRFKDFAETAADWFWEMGPDLRFIYLSERYQKITGSDPKQALG
                     HTHTEVFVRRIRDAEALHAYCKLIEARRPFKNMEAFWEQPHGSSRVQQLSGVPVFDSS
                     GVFAGYRGSGSDVTEARYLSEQPSYEVSHDELTGLFNRREFKRRLKQLFNTLQANEGE
                     HALCFVDLDEFKAVNDSCGHEAGNELLRQLARLLLERIRKGDTLARLGGDEFGLLLTH
                     CPMQQALRIAENLHQTIIGFRFHWDDKVFNIGTSIGLAAITKDSE"
BASE COUNT          334 a          458 c          525 g          375 t
ORIGIN      
        1 gcggctcatg cacgggtggt agcctttgct aagccgtcta taaaacccgg ccgcctgggc
       61 ggtctcgaac ctgcggagat agccgctatc caggcagcgc tcacgtttga tgtcatcctg
      121 gtcaaggcgg atggcgcacg ctcccgccgg atcaagtccc ccggactcga ggagcccaag
      181 atcccgaaag aggccactac cgtgatcccg gtcgtctcgg cacacgcgat cggcgaacca
      241 ctctccgagc gcatcgccca ccggctggat cgcttggcta cggtgcttaa tatacggcct
      301 ggcgatagct tgacggccaa ccacatcgct cagttgctcg caagtgatca ggggatgctg
      361 aagggtgtgg gtaaagcgag ggtggtgccg ctgatcaatg gggtcgataa cccggcgatc
      421 aaacaggcgg cctggaaggc ggcggagcag gcgcttgctc tctcgtcgcg ctttgatcgc
      481 gtggtgctgg cctgtatgag gcatcccaac cccctcgttg gggtggtatg gcgctgatgt
      541 gacttagaaa cctttatgga tcgattcgtt cggctaagaa cactgttgtt tatattcttc
      601 atagtactgt ttttgggacc ggtgctgacg ctttgggcat gcgccggtga accgctcggt
      661 acgaccttgg tttttatggt gtcgggggcc ttcatcgcgg tgctggtgag tggaggcttg
      721 gcggacgttt tgaccgagcc ggtgctaaag ctcaccgagg cggcgcaaaa gatggcgcag
      781 ggtcaatgga gcctaccggt gacgctgagg aaccatgtgc ccttggaagt gcacgctttg
      841 gtggatgcct tcaatcgaat ggtcgagcaa atggctcagg tacatcaggc cctacagggg
      901 aatgaacggc gctttaagga ttttgccgaa acggccgcgg actggttctg ggaaatgggg
      961 cccgatctcc gcttcatcta tctctccgag cgctatcaga agatcaccgg cagcgatccc
     1021 aaacaggcgc tcggtcatac ccacacggag gtattcgtgc gccgcatccg cgatgccgag
     1081 gcgctgcacg cctattgcaa gctcatcgag gcgaggcgtc ccttcaagaa catggaggcc
     1141 ttctgggagc agcctcatgg cagcagccgg gtgcagcagc tgagcggtgt gccggtcttc
     1201 gatagcagcg gtgtgtttgc cggctaccgt ggcagtggca gcgatgtgac cgaggcccgc
     1261 tatctttccg agcagccttc ttatgaagta agtcacgatg aattgaccgg tttgtttaac
     1321 cggcgtgagt tcaaacggcg cttgaagcaa ctctttaata ccttgcaagc caacgagggc
     1381 gaacatgccc tgtgttttgt ggacttggat gaatttaaag ccgtcaatga cagttgtggc
     1441 catgaagctg gcaatgagtt gttacgccag ctggcgcgtt tacttttgga gcggatccgg
     1501 aaaggggata ctctcgcccg tttgggcggt gatgaattcg gtctgctgct cacccactgt
     1561 cccatgcagc aggccctgcg catcgccgag aacctgcacc agacgatcat cggtttccgc
     1621 tttcactggg acgataaggt cttcaatatc gggaccagta tcggcttagc tgccattacc
     1681 aaggactcgg aa
//
LOCUS       DASQSL010001382         2417 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_197733, whole genome shotgun sequence.
ACCESSION   DASQSL010001382 DASQSL010000000
VERSION     DASQSL010001382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2417
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197733"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(73..687)
                     /locus_tag="VE844_14200"
     CDS             complement(73..687)
                     /locus_tag="VE844_14200"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC02456.1"
                     /translation="MGLYLDPPAGAVVLSFDEKTQVQALDRTQPLLPISFGKTEKRTH
                     DYIGHGTTNLFAALDVLTGTVVGRCFDRRRTTEFVMFLNHVLRTYPKDKEIHVVLDNL
                     STHNNEDVEVWLAKHPNVTFHFTPKGASWIHQIETWFGIITRQAIRRGSFTSLAQLIK
                     KISNYVTHWNEDAKPFKWVATAGQILEKVAVLDCDFRKLVSNNI"
     gene            complement(638..1165)
                     /locus_tag="VE844_14205"
     CDS             complement(638..1165)
                     /locus_tag="VE844_14205"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC02457.1"
                     /translation="MELTVDQRTELESVLRIGYDGSVSARAQMVLWRAEGHSVADVAA
                     MAGTTKPTVYKWIDRFEKGGLGALDSRPSTGCPRSVSGEVRARILALTKVPPPAETGL
                     THWSSYEMARYLHRHEGISVSHNFVSVLWRECDLQPHRQGTFKVSCDPDFPGEGRRHR
                     GSVPGPAGGCGGAVV"
     gene            1312..2319
                     /locus_tag="VE844_14210"
     CDS             1312..2319
                     /locus_tag="VE844_14210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009482509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS30 family transposase"
                     /protein_id="HZC02458.1"
                     /translation="MKTNTPLTAEERELISRELAKKSSHRSIAKALGRHHSAISREIH
                     RNGGDDHYRATAAEERAATKRRRPRPRKLEANQRLHDFVQYGLVHEWSPEQISGKLAE
                     QYPDDLDMRVSAETIYQTLFLQARGELRTQLKLALRTGRTRRISPSRTAETRGKITNM
                     VSISERPAEAEDRAVPGFWEGDLVLGKGNKSQIATLVERQTRFVMLVRIPYDRTAERV
                     AHLLARKMETLPDFLKNSVTWDQGKELAAHEKFTVKTGLPVYFCDPHSPWQRGSNENT
                     NGLLRQYFPKGTDLSGFTQAELDAVATRLNNRPRRTLGFKTPAEKLDELLVNAGVAIT
                     T"
BASE COUNT          574 a          721 c          681 g          441 t
ORIGIN      
        1 tcggtggaat taagaggagt atctcaccta aaatgttggt gaccctagtg tcttgtaatg
       61 gaatgatgtt tactagatgt tgttcgacac caacttcctg aagtcgcagt cgagaacagc
      121 aaccttctca aggatctgac cggctgtggc gacccacttg aacggcttgg cgtcttcatt
      181 ccaatgcgtc acatagttgc tgatcttctt gatcagttgg gcaagggagg tgaaagaacc
      241 acgacggatc gcttgccggg tgatgatgcc gaaccatgtc tcgatctgat ggatccagga
      301 tgcgcctttc ggtgtgaaat ggaaagtgac gttcgggtgc ttggcaagcc acacctcgac
      361 gtcctcgttg ttgtgtgtgg acaggttgtc caggaccaca tggatctctt tatccttcgg
      421 gtaggtccga aggacgtgat tcaggaacat cacgaattcc gtggtccgtc gccgatcgaa
      481 gcagcgaccg acgacggtgc cagtgagaac atccagggcg gcgaacaggt tcgtggtgcc
      541 gtgaccgatg tagtcatgcg tgcgcttctc ggtcttcccg aaggagatcg gcagcaacgg
      601 ctgcgtccgg tccagggcct ggacctgcgt cttctcatca aacgacagca ccaccgcacc
      661 cgccggcggg tccaggtaca gacccacgat gtcggcgacc ttcgcccggg aagtccggat
      721 cgcacgacac cttgaacgtc ccctgccgat gcggttgcag atcgcactcc cgccacagca
      781 ccgacacaaa attgtgcgag accgaaatcc cttcgtggcg atgcagataa cgggccatct
      841 catagctcga ccagtgcgtc agcccagtct cggccggcgg cggaaccttc gtcaacgcca
      901 gaatacgcgc ccgaacctcc cccgacaccg accgcggaca ccccgtcgac ggccggctgt
      961 ccaaggcgcc aagaccaccc ttttcgaacc ggtcaatcca cttgtagaca gtcggtttcg
     1021 tcgtgccagc catcgcagca acatcggcca cgctgtgccc ctcagcgcgc cacaacacca
     1081 tctgcgcgcg agccgacaca gatccgtcat agccgatacg aagaacagac tccagctccg
     1141 tgcgctggtc aacggtgagc tccataagaa cagtatcgca gagaccgcac ctaaggtaaa
     1201 ggacattcaa ttatgagaca ctagaaaatc tcgaagaaga aaataatgct tggtctcaag
     1261 tggtgatcgc gacagtgtga gataattcct cagactgata ggcggttacc cttgaagaca
     1321 aacacaccat tgacggccga agaacgcgaa ctgatctcgc gggaactcgc caagaagagt
     1381 tctcatcggt ccatcgcgaa agcgctcggc cggcatcatt cggcgatctc ccgcgagata
     1441 caccgaaatg gtggtgatga ccattaccga gcgacggccg ccgaggaacg cgccgcgacg
     1501 aagcgacggc gtccccggcc acgaaagctg gaagccaatc aacggctcca cgatttcgtg
     1561 cagtacggct tggtgcacga atggtcaccg gagcagatca gcggtaaact ggccgaacag
     1621 tacccggacg atctggatat gcgcgtgtcc gccgaaacga tttatcagac gctgtttttg
     1681 caagctcggg gtgagctgcg cacgcagctg aagctggcgt tgcgcaccgg tcgcacgcgg
     1741 cggatcagcc cgtccaggac ggccgagacc aggggaaaga tcaccaacat ggttagcatc
     1801 agcgagcgac ccgctgaggc cgaggaccgg gccgtgccgg gcttttggga gggtgacctc
     1861 gtcctgggca agggaaataa gtcacagatc gccaccctgg tggaacgcca gacgaggttc
     1921 gtgatgctgg tccggattcc ctacgaccgc accgccgaac gcgttgccca cctgctggcc
     1981 cggaagatgg agaccctacc cgacttcttg aaaaacagcg tgacctggga tcagggaaaa
     2041 gaactcgccg cacacgaaaa gttcaccgtg aaaaccgggc ttcccgtgta tttctgtgat
     2101 ccacactcgc cctggcagcg aggaagcaac gagaacacca acggcctcct gcgtcagtac
     2161 ttcccgaaag gaaccgacct ctcggggttc actcaagccg agctcgatgc ggtagccaca
     2221 cgactgaaca accgtccacg aaggacactc gggttcaaga cccccgccga aaaactcgac
     2281 gaactactgg tcaatgccgg tgtcgcgatc accacttgag accaaggtca atttcaaatt
     2341 ggggcgactc aatcgccagc tgaccgtgca agaacgtgct gacaaggtaa tgcccatccg
     2401 tccggtatac agagatt
//
LOCUS       DASQSL010001383         1098 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_188755, whole genome shotgun sequence.
ACCESSION   DASQSL010001383 DASQSL010000000
VERSION     DASQSL010001383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188755"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1082)
                     /locus_tag="VE844_14215"
     CDS             complement(<1..1082)
                     /locus_tag="VE844_14215"
                     /inference="COORDINATES: protein motif:HMM:NF033592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC02459.1"
                     /translation="MLTLLWRQVPSVCELSRVLAREDCLWAPRLKVSQQALSQRFLSF
                     PAELFQRVLGALLPRLRQRWAERQRPLPAAVVHARQHFQELLIADGSTLEALFRKLKA
                     LQELPRGPLAGKICTVIDLASRLPRYVWFTELAQAHDTNFIDRILKVSRAGLLWVFDR
                     GLYDFGFFERLIECGAGWITRSKSNLSYSVSQVLEQSDFIRDRLIRVEGCAPLLRLVE
                     VRFERQWYRYLTSVIDPRILPAWVIADIYRRRWRIEEAFFIVKRVLNLSYLWTGSENG
                     VRLQVWSTWLFFAVLVDLGDALADEMELEFDRISLEMLMRGLYHFSVARQRGLADDPV
                     KYFAAPENQDLGVVKRLRKKRPPRVG"
BASE COUNT          260 a          385 c          279 g          174 t
ORIGIN      
        1 aaacccaccc gcggaggccg ctttttgcgc agtcgcttta ccacccccaa gtcctggttc
       61 tccggtgccg cgaagtactt gaccgggtca tcagccagcc cccgctggcg tgccaccgag
      121 aagtgataca acccgcgcat caacatctcc agcgagatgc ggtcaaactc aagctccatc
      181 tcgtcggcta gggcatcgcc caaatcgacc aacacggcaa aaaacaacca cgtgctccac
      241 acttggagcc gcaccccgtt ctccgagcca gtccacagat acgacaggtt cagcacccgc
      301 ttgacgataa agaacgcttc ttctatacgc caacggcgtc gatagatatc cgctatcacc
      361 caggccggga gtatcctagg atcgatgaca ctggtcagat aacggtacca ctgccgctca
      421 aagcgcactt ccaccagccg cagcagagga gcgcagccct cgacccgaat cagccgatcc
      481 cggataaaat cgctttgctc gagcacctgg gagacgctat agctcagatt ggatttgctg
      541 cgcgtgatcc accccgcgcc gcactcgatc agccgctcaa agaaaccaaa atcgtaaaga
      601 ccgcggtcaa agacccacag taggcccgcg cgcgagactt tgaggatgcg atcaataaag
      661 ttggtatcat gagcctgggc cagttcggta aaccacacat aacgcggtag ccgactggcc
      721 agatcaatca cggtgcagat cttgcccgcc aggggacccc ggggcagttc ctggagcgcc
      781 ttgagcttgc gaaacaaggc ctccaacgtc gacccatcgg caatcaacaa ctcctgaaag
      841 tgctggcgcg cgtgcaccac cgctgccggc aaggggcgct ggcgctccgc ccagcgctgc
      901 cgcagtcgcg gcaggagcgc ccccagtacc cgctgaaata gctccgccgg aaaactcaaa
      961 aaccgttggc ttagcgcctg ttgcgagacc ttcagtcgcg gtgcccacag acaatcttca
     1021 cgcgccagca cccggctcag ctcacacacc gatggcacct ggcgccacag cagcgtcagc
     1081 acccccgcca ccatcacc
//
LOCUS       DASQSL010001384         1011 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_12100, whole genome shotgun sequence.
ACCESSION   DASQSL010001384 DASQSL010000000
VERSION     DASQSL010001384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12100"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..393)
                     /locus_tag="VE844_14220"
     CDS             complement(<1..393)
                     /locus_tag="VE844_14220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02460.1"
                     /translation="MYLRTTKRKNRDGGEVVYYQLAHNVRHPKTGNTVAHVIHTFGRA
                     DQLKREGLVRLCRSIGRVCGLEVGEGGGEGVSEISRAAETRCLAEDVRLVGSRRLGLV
                     WVVEALWERLAIGPILRQVVGGGAELERA"
BASE COUNT          227 a          326 c          232 g          226 t
ORIGIN      
        1 cgcccgttct agctccgccc ccccacccac aacctggcgc aagatgggac cgatcgccag
       61 ccgttcccac agcgcctcca ctacccaaac caggcctaac cgacggctcc ccaccagcct
      121 gacatcctcg gctaaacagc gtgtctcggc cgcccgggat atctcggata ccccttcgcc
      181 acctccctcc ccgacctcta agccgcagac ccggccaatc gaccggcaca ggcgcactaa
      241 gccctcgcgc ttcagctgat cggctcggcc aaaggtatgg atgacgtggg ccaccgtgtt
      301 acccgttttc ggatgccgca cgttgtgtgc gagctggtaa taaactacct cgccgccatc
      361 tcggtttttg cgcttggtgg ttcggagata catgcccatt aacttcgcat gtaccaccaa
      421 ataagtcaat acaaaatact cctatacgtg tgcccacaac ttggcggcta cctcaccccc
      481 ttcagagccg taactcattg aaagctctca aattgctatc attagtctgc ctctcatgcc
      541 acgccctcgg gactccggcg gaacctccac accctcacca tcacgggtgc ttcgtgtggc
      601 cttcgggcac gttaaaaccc tcggcatccg ctaaccaagc tcatctcgaa gctgtaccag
      661 cacaaaaggc gagcgcggtc tcccctacgg cctagttata gtcgatgggg atgtcaccac
      721 cccgcacctc taattcagaa ccgtgcatga gagtttccaa ctcacacggc tcctagttga
      781 tatgatggtt tgttagttcc gttttactgt agactctcga tatagttcgg aatatcattt
      841 ctgatagata tattcagtag ttccaagttt actccattag cgaatgctgc tggtggggtt
      901 atcgtcaagg cgcttgtgcc agggcgacac tgtcgacaat accaaaggtg agcacggcca
      961 agtataggct agccatagga gaagcatttt aaagggtagc aggccaagat t
//
LOCUS       DASQSL010001385         1365 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_160191, whole genome shotgun sequence.
ACCESSION   DASQSL010001385 DASQSL010000000
VERSION     DASQSL010001385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1365)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1365)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1365
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160191"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(435..509)
                     /locus_tag="VE844_14225"
     tRNA            complement(435..509)
                     /locus_tag="VE844_14225"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(471..473),aa:Glu,seq:ttc)
     gene            complement(552..624)
                     /locus_tag="VE844_14230"
     tRNA            complement(552..624)
                     /locus_tag="VE844_14230"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(589..591),aa:Lys,seq:ttt)
     gene            979..>1365
                     /locus_tag="VE844_14235"
     CDS             979..>1365
                     /locus_tag="VE844_14235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_048061049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HZC02461.1"
                     /translation="MDGTPGTRIWMDGTMVEWGEARVHVLTHTLHYGLGLFEGIRCYK
                     TERGPAIFRLPEHVDRLFEGAQIIGIQIPFSAEQITAAIRQTVRDNALEECYIRPLVY
                     VGYGKLGLNPLGIPVRVAIAAWPWGAY"
BASE COUNT          277 a          395 c          420 g          273 t
ORIGIN      
        1 tatacacctg agccagctgt ttgcacccat tttcacccat cccacccgct gcctgtgaag
       61 gtgccgtcct cttcacacgc catgcgggat atgagagagc actatagggc cgccgtgtct
      121 gacgtgtcaa gcacttttct caaggatgag acgggtaatc cgcgcgaccc gatctagaga
      181 attttggggg atgataaatg caagaatagc ttgatgattt gaggggctgt gaagagatag
      241 cgcctgttcc actgctggtt gggagcgact atttggggag accgctcgtc acctgtgggg
      301 agatagacga gatctggcat ggtgagcatc cagctgcgtc tatcgagata acatcgaaca
      361 cacggttctg cattctctca tagagagcaa cgccgaatcg gcctggcaag tccttcggga
      421 aacttagcga tgagcgtccc cagggggatt cgaacccccg ttgccgccgt gaaagggcgg
      481 tgtcctagac caggctagac gatggggacg tgcgttgcgg ggtggttggc tatgattcca
      541 cgtgagcaga gtgagccgcc caggactcga acctggtacc acctgcttaa aaggcaggtg
      601 ctctgcctga tgagctagcg gcccctgagt ctgccgttag cgctcagcgt gcgcaggcgc
      661 tgtggggtgg cacgatcgcg tgtcggtgct gcctcgaaca tagccttgac acgtgctgat
      721 caccgctggc tgaccgctaa ccatacccga gcacaaggcc gtttgtcaac aggaatttcg
      781 cggcttacac ggcgttgagg cgtcttgtcc cggccagcga cagccgggcc gcggccgcac
      841 cacacaagcc tttgagggta ctttctcctt gcacccatcg ccgccactat ggtagcttag
      901 aacgtaagtt tcaatcgatg tgctgcgcgc tacgcttgag agaggagcga gcccatgacg
      961 atgggaaacg aggtatggat ggacgggacc cctggcacgc gcatctggat ggacggcacc
     1021 atggtcgagt ggggggaggc gcgagtccac gtcctgaccc acaccttgca ttacggcttg
     1081 gggctcttcg aaggcatccg ctgctataag accgagcgcg ggcccgcgat cttccgctta
     1141 ccggagcacg tcgatcgcct cttcgaaggc gcgcagatca tcggcataca gatccccttc
     1201 agcgcagagc aaatcaccgc ggccatcagg cagacggtgc gcgacaacgc cctggaggag
     1261 tgctacatcc gacccttagt ctacgtgggc tacggtaaat tagggctcaa ccctctgggc
     1321 atccccgtcc gcgtcgcgat cgccgcctgg ccgtgggggg catac
//
LOCUS       DASQSL010001386         1120 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_188769, whole genome shotgun sequence.
ACCESSION   DASQSL010001386 DASQSL010000000
VERSION     DASQSL010001386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188769"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            59..>1120
                     /locus_tag="VE844_14240"
     CDS             59..>1120
                     /locus_tag="VE844_14240"
                     /inference="COORDINATES: protein motif:HMM:NF020084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FIST N-terminal domain-containing protein"
                     /protein_id="HZC02462.1"
                     /translation="MATKAGVGMSRHHNPNVAGREAAEQALEKAGVSKPDFVFMFGSI
                     GYDQRSLVQAVRETTRGAPLSGCSVEGTIGGDNTDESNFSVVVTAIFSEELQWINGMA
                     TGLSGDSRAVGKRVAKDLLPHLAADSIGLFVFPDGMSVALDSFFAANFDNFFAGLEEN
                     LPSDRFLPLWGGGANTNFNNMASPPYQYCDDEVITDGVSYALLSGKAQTGWAISHGCI
                     PIGGERIVTRSHGNVIYEIDGKPAVKVLKEYLPEQALAEDEDWLPYSVSLSLCFRAPS
                     YMKDEEYIVRGMPSVSMADGSITVQTEVKEGTSVWLSSRDKEKITTGFDRMAAQIKNQ
                     LGGEKPKLIFQFECATRGKL"
BASE COUNT          257 a          308 c          327 g          228 t
ORIGIN      
        1 gatgctgctc aacccttcct aggttaggat acgttgataa taggcaggag gtgtacccat
       61 ggctaccaaa gccggggtcg gcatgagccg acatcacaat cccaacgtag cgggtcgtga
      121 ggccgccgag caagcattgg agaaagcggg ggtcagcaaa ccggacttcg tcttcatgtt
      181 cggctccatc ggctacgatc aacgctcctt ggtgcaggcg gtccgcgaga ctacaagagg
      241 tgccccccta agcggttgct cggtagaggg cacaataggc ggagacaaca ccgatgaatc
      301 taatttctcc gtggtcgtta cggcgatctt ttcggaggag ctgcagtgga tcaacgggat
      361 ggcgacgggg cttagtggcg actcacgcgc cgtcgggaag cgggtagcca aggacctgct
      421 gccccaccta gctgctgata gcattggcct gttcgtcttc cctgatggaa tgtcggtggc
      481 cttggatagc ttctttgctg cgaacttcga caacttcttt gcggggctgg aggaaaacct
      541 cccaagcgac cgattcctcc cactgtgggg tgggggagct aacaccaact tcaataatat
      601 ggcgtcacca ccttatcagt attgcgacga cgaagtcatc actgatgggg tctcctacgc
      661 gctgctctca ggtaaggcac agaccggttg ggccatcagc cacggctgta tccctatcgg
      721 tggcgagcgc atagtgaccc gctcccacgg caacgtcatc tacgagatcg acggtaaacc
      781 agctgtaaaa gtactaaagg agtatctgcc agagcaagcc ctcgctgagg atgaggactg
      841 gctgccttac tccgtatcgc tttcgctctg tttcagggct cctagctaca tgaaagacga
      901 agagtacatc gtccgaggca tgccttctgt gagcatggcc gacggctcca tcaccgtaca
      961 aacggaggtc aaggagggca cgagcgtatg gctctcgagc cgagacaagg agaagatcac
     1021 tacgggcttc gatcggatgg ctgcccagat caagaaccaa ctaggcggtg agaaacccaa
     1081 actcatcttc cagttcgagt gtgccacccg aggcaaattg
//
LOCUS       DASQSL010001387         1183 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_132734, whole genome shotgun sequence.
ACCESSION   DASQSL010001387 DASQSL010000000
VERSION     DASQSL010001387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132734"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            391..>1183
                     /locus_tag="VE844_14245"
     CDS             391..>1183
                     /locus_tag="VE844_14245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC02463.1"
                     /translation="MRALAEGNSLRGTGRIVEVDKDTVCDWLDRAGRHCRAVTTYLFD
                     NLHITECQLDELWSFVRKKEAHLTLAEKVLALYGDAWVWTAFAPPWRLVPAFVVGKRD
                     QDHANILLKRLHAVSCGYMPFFTSDQLPHYGRALLHVYGMPEVILHMPGKRGRKPKPK
                     LLPPSDLHYAQVVKHRKGGRVVKVTTKIIFGTEEAVQHRLVASPVSQTINPSFVERNN
                     LTCRQCNGRLLRKVLSFSKDLTWLEKYLWLSLAYYHFVLPHKSLRR"
BASE COUNT          261 a          328 c          342 g          252 t
ORIGIN      
        1 agcgattgcg gcgtggaatg agctcggatt aaggtctgga gatccgaacg ggcatgttgc
       61 gataaaatga tgcggggagc aataggcggt agtgtccctc aacagcgtgt atggatatgc
      121 gcgaacgata agcgagaaca tgcactgtaa actcctgatg caggatacac ggtctgcatc
      181 aggagggagc catggaactc accacatgtt ttctgtcctc acccgcaatg cacgcactac
      241 ggcaaacgtg gcggcgctca tctggtccgt cgcggagctg accgcggcat tcctcggctg
      301 ctgtgcacca aatgtaagag cacgttttca gctcgccagg gaacggcata cttcggcgta
      361 cacgccgagg cgcccaatta cacgatcgcg atgcgggccc tggcagaagg taattccctg
      421 cggggcaccg gccgtatcgt cgaggtcgat aaggataccg tctgtgactg gctcgatcga
      481 gccgggcggc attgtcgagc cgtgaccacc tatctgttcg acaacttgca tatcaccgag
      541 tgccaattgg acgaattatg gagcttcgtg cgcaagaaag aagcgcatct caccctagcc
      601 gaaaaggtgc tagcgctcta tggcgatgcg tgggtatgga ccgccttcgc accgccatgg
      661 cgcttggtac ccgcctttgt ggtaggcaaa cgtgaccaag accacgccaa catactgctc
      721 aagcgcctgc acgcggtcag ttgcggctac atgccgttct ttaccagtga tcagttaccg
      781 cactatggcc gtgccttgtt gcacgtgtat ggcatgccgg aagttatcct gcacatgccg
      841 ggcaaacgcg ggcgtaagcc caaacccaag ctcctccccc cttctgactt gcactatgcc
      901 caggtcgtca agcaccggaa aggggggcgt gtggtgaaag taaccaccaa gatcatcttc
      961 ggcacggagg aagcggtgca gcatcgctta gtcgcttccc cggtcagtca gaccatcaat
     1021 ccgagtttcg ttgagcggaa caacttgacg tgtcgccaat gtaatgggcg tctgttgcgc
     1081 aaggtgctca gcttctccaa ggacctgact tggttagaga agtatctgtg gttgagcctg
     1141 gcttattatc acttcgtcct gccgcataag agtttgagac gtc
//
LOCUS       DASQSL010001388         1001 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_115583, whole genome shotgun sequence.
ACCESSION   DASQSL010001388 DASQSL010000000
VERSION     DASQSL010001388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115583"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..300
                     /locus_tag="VE844_14250"
     CDS             <1..300
                     /locus_tag="VE844_14250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012500626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HZC02464.1"
                     /translation="VNFAPVAGDPLAMKTLVQQELIRRGILWSGIHNLCYAHTQADID
                     YTLAAYAEVLPIVKKAVESGNIRSFLKGEMLQPIFRRTGHFNTKPKPTARAASTK"
     gene            309..>1001
                     /locus_tag="VE844_14255"
     CDS             309..>1001
                     /locus_tag="VE844_14255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014856158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HZC02465.1"
                     /translation="MHTLERFSLQGKTAVVTGAAGLLGHYHCRALAEAGATVIATDID
                     PARCDAVAGGLSGTAFGLAADVTDPESIKRLLANVLEYTGRVDVLVNNAAINDRFESP
                     QAALELSRFENYPLALWRRSLEVNVTGVFLCCQILGAKMAEVGAGSIINIASTYGLVA
                     PDQSLYRDHEGRQRFYKSAVYPTTKGAVLAFTRFLAAYWGTAGVRVNALSPGGVENAQ
                     DAFFVGEYAKRTP"
BASE COUNT          213 a          284 c          304 g          200 t
ORIGIN      
        1 gtaaattttg caccggttgc aggcgatcca ctggcgatga agaccctcgt ccagcaagag
       61 ttgatccggc gcggcatcct ctggagcggc atccataacc tctgctacgc ccacacccaa
      121 gcggatatcg actacacgct cgcggcctat gccgaggtct taccgatagt gaaaaaggcg
      181 gttgaaagcg ggaacatacg atcgtttctt aagggcgaaa tgctgcaacc gatcttcagg
      241 aggaccggcc acttcaatac taaacccaaa ccaaccgcac gagcggcatc aaccaagtag
      301 agcgccttat gcacacgctg gaacgcttct cgctccaggg caagacggct gtggtcacag
      361 gtgccgcggg actgctcggc cactatcatt gccgggcgct cgccgaggcc ggcgcgacgg
      421 tcattgctac ggatatcgac ccggcaagat gcgatgcggt ggcgggaggt ttgagcggga
      481 ccgcgttcgg cctggccgct gatgtgaccg atcccgaatc gatcaagcga ttactggcaa
      541 atgtccttga atataccgga cgcgtcgatg tgctggtcaa taacgccgcc atcaatgaca
      601 ggttcgaaag cccacaggcc gcacttgagc tttccaggtt tgagaattat ccgctggcgc
      661 tgtggagaag gtcgctggag gtgaacgtga ccggggtttt cctctgttgc cagatcctcg
      721 gtgccaagat ggcggaggtg ggcgcaggca gtattatcaa tatcgcctcg acctatggcc
      781 tggtggcgcc ggatcagtcg ctttatcgcg atcacgaggg ccggcagcgc ttctacaaat
      841 ccgcggtcta tccgaccacc aaaggggcgg tgctcgcgtt tacacgcttt ttggctgcct
      901 attggggaac agccggggtt cgggtgaatg cgctctcccc cggcggagtc gagaatgcgc
      961 aggatgcatt ctttgtgggc gaatatgcaa agcgcacacc g
//
LOCUS       DASQSL010001389         1238 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_132748, whole genome shotgun sequence.
ACCESSION   DASQSL010001389 DASQSL010000000
VERSION     DASQSL010001389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1238
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132748"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1238)
                     /locus_tag="VE844_14260"
     CDS             complement(<1..>1238)
                     /locus_tag="VE844_14260"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002684438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HZC02466.1"
                     /translation="AAGLVGMRFNTIGVSDGISMGTEGMSYSLQSRDLIADSIETVMG
                     AQWYDANISIPGCDKNMPGCLMAMGRLNRPALMVYGGTIKPGHRDQQTLDIISAFQSY
                     GEYLTGRIDEDIRKDIVRRSCPGPGACGGMYTANTMAAAIEALGMSLPYSASTPAVDP
                     GKLEECYRAGAAIRNLLEKDIKPRDIMTRTAFDNAMVVVTVLGGSTNAVLHLIAMAQA
                     VGVKLTIDDFQRVSDRTPYLADLKPSGRYVMEDLHRIGGTPAVMKYLLEHDLINGGCL
                     TVTGKTVAENLADVPDLKQDQDVIHSLADPIKSTGHIQILKGNLAPGGAVAKITGKEG
                     LQFSGPARIYDSEEDMLSALERTEIQPGEVVVIRYEGPKGGPGMPEMLTPTSAIMGAG
                     LGDQVALITDGRFSGGSHGF"
BASE COUNT          245 a          378 c          360 g          255 t
ORIGIN      
        1 tgaagccgtg cgagccccct gaaaaacggc catcggtgat aagcgccact tgatcgccaa
       61 gtcccgcacc catgatcgcc gaggtcggcg tcagcatctc gggcatcccg ggtccccctt
      121 tggggccttc gtagcggatc acgaccacct cacccggttg gatctcggtg cgttccaagg
      181 cgctcagcat gtcttcttcg gaatcataga tccgggcagg cccactaaac tgcagcccct
      241 ctttacccgt gatcttggcc accgccccac cgggggccag attgcccttg aggatctgga
      301 tatggccggt ggacttgatg ggatcggcga gagaatggat cacatcttga tcttgcttaa
      361 ggtccggcac atcggccagg ttctcagcga cggtcttgcc ggttacggtc aggcacccgc
      421 cgttgatgag atcatgctca agcagatatt tcatcaccgc cggggtgccg ccgatccgat
      481 gcagatcctc catcacataa cggccgctcg gcttcagatc cgcaagataa ggcgtgcgat
      541 cgctgacgcg ctggaaatca tcgatcgtca gtttcacccc cacggcttgg gccatggcga
      601 tgagatggag caccgcgttg gtcgagccgc cgagcaccgt gactaccacc atggcattgt
      661 caaaggcggt gcgggtcatg atatcgcgcg gcttgatatc tttctccaat agatttcgga
      721 tagcggcgcc cgcccggtaa cattcctcga gcttgccagg gtctaccgcc ggggttgaag
      781 cgctataggg caaggacatg cccagggcct cgatcgccgc ggccatggtg ttggcggtat
      841 acatgccgcc gcaggccccg ggacccgggc aggatcggcg gacaatgtcc ttgcggatgt
      901 cttcatcaat gcggcccgta agatactcac catagctttg gaaggctgag atgatatcga
      961 gcgtctgctg gtcacgatgg cccggtttaa tggtgccgcc atagaccatg agcgccggac
     1021 ggttaagccg gcccatagcc atgaggcatc ccggcatgtt tttatcgcaa cccgggatgg
     1081 agatattggc atcgtaccac tgcgcgccca tgacagtctc gatcgagtcg gcgatcagat
     1141 cgcgggattg cagtgaatag ctcatgcctt ccgtgcccat ggagatccca tcactcacac
     1201 caatggtgtt aaaacgcatg cccacaaggc ccgctgct
//
LOCUS       DASQSL010001390         2079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_147220, whole genome shotgun sequence.
ACCESSION   DASQSL010001390 DASQSL010000000
VERSION     DASQSL010001390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2079
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147220"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1512)
                     /locus_tag="VE844_14265"
     CDS             complement(<1..1512)
                     /locus_tag="VE844_14265"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZC02467.1"
                     /translation="MGRAADLRFLIVDDSEVNRCFLEQTFTAWGICHKSVASGPRALE
                     VLRVAAAQGEPYDIALIDERMPAMSGSDLLQAIAHDPLLAPIKVIMMSHQQTSYAGMH
                     IQQISYAGTHIQPPLETDKTPDSNRVAWLAKPLQRTLLYNCICNLANPPEHGSVKSIA
                     EPPKPAFLVGGRILLVEDDRTNQLVVAGLLERLGCRIEIAGTGQEALELIAQRSFDLI
                     LMDCYMPQLDGYEATRRIRALATDNRRIPIIAMTAYTQIGASEACLAAGMDDYLPKPV
                     RLDALREKLQRWLAPKQSSTPTEAAEGPIAREPAAVAVLDRTVLTELRNNLQEAFSKV
                     IEVFLEDMPSYQSALKTAISEGDARRLTEVAHTLKGSSKTLGANRLVAVSKQLEVLGR
                     SGSTEGAMPLFEAFTGEYARVRAALQHEFRPSVREPAQKEPGQPRIVVADDDRGVRLA
                     LRNVLERDGYQVEEASNGLQALTLCQRGTPDLVLMDARMSALDGFAACRRIHDL"
     gene            complement(1482..>2079)
                     /locus_tag="VE844_14270"
     CDS             complement(1482..>2079)
                     /locus_tag="VE844_14270"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZC02468.1"
                     /translation="IEDILDFSRLQSGKLKVQPVDFCLQDLLDDVVGLLAGQARRKHL
                     DLGYYRISEEVPARVQGDPSRVRQLLINLVGNAVKFTEHGEVAITVSYMAAQENRTWL
                     RFEVKDTGIGIPCEAQAYIFEPFSQVDGSTTRKYSGTGLGLAICRQLVEFREVRSGWT
                     VNPAREVDSGSPCPSSRQGRYPHKITFTRWVVPRICAS"
BASE COUNT          418 a          616 c          580 g          465 t
ORIGIN      
        1 gagatcatgg atccgcctgc aggcagcgaa gccatccagt gccgacattc gggcatccat
       61 tagaaccaga tcgggcgtgc cccgttggca cagtgtgagc gcttggaggc cgttgcttgc
      121 ttcctcgacc tggtatccat cccgttcgag cacgttgcgc agcgccaggc gcactccgcg
      181 atcgtcgtca gcgacgacga tacgcggctg accgggctct ttctgagccg gttcgcgtac
      241 actcggccgg aactcatgct gcaatgccgc tctaacgcga gcatattcgc cggtgaatgc
      301 ctcaaacagt ggcatcgcac cctcggtaga gccgctgcga ccgagtacct ccaattgttt
      361 ggatacagcc accagacggt tcgccccgag ggttttgctg ctgcccttta gggtgtgcgc
      421 cacttctgta agccgccggg catctccttc tgagatagcc gtctttaaag cgctctgata
      481 gctcggcata tcttcgagga agacctcgat cacttttgag aacgcctcct ggaggttatt
      541 gcggagctca gttaacaccg tgcgatcgag caccgctacc gccgccggct cccttgctat
      601 agggccttcg gctgcctctg ttggcgtgga gctctgttta ggggccagcc agcgctgtaa
      661 cttttctctc agcgcatcga gcctcacggg cttaggcaga taatcgtcca taccggcggc
      721 cagacacgct tcgctggcac ctatttgggt ataggccgtc atggcgatga tcgggatccg
      781 ccggttatcg gttgccagcg cccggatccg ccgagtggcc tcatagccgt ccagctgggg
      841 catatagcaa tccatgagga tcaggtcaaa ggatcgctgc gcgataagct ccagggcctc
      901 ttgcccggtc ccggcaatct ctatccggca accgagccgc tcgagcagcc cggccactac
      961 cagttggttg gtcctgtcat cctcaacgag cagaatacgc ccgcccacaa ggaaagcagg
     1021 tttaggaggt tcggcaatag acttcacgga gccgtgttcg ggcgggttag ccaggttaca
     1081 tatacaatta tataaaagcg tcctttgtag cggcttagcc agccaggcta cacgattcga
     1141 atcaggggtc ttgtcggttt cgagtggcgg ctgtatatgc gtccctgcat atgatatctg
     1201 ctgtatatgc atccctgcat atgatgtctg ttgatgggac atcatgatca ctttgatcgg
     1261 ggcgagtaga ggatcatgcg cgattgcctg taacagatcg ctgccgctca tagcgggcat
     1321 gcgctcatct atcagagcga tgtcataagg ctccccctga gccgcagcca cacgtagcac
     1381 ctccagggct cgtggcccag aggcaacgct tttgtggcag atcccccagg cagtgaaggt
     1441 ctgttccaga aagcaacgat tgacttcgct atcatccacg atcaagaagc gcagatccgc
     1501 ggcacgaccc aacgggtaaa cgttatcttg tgcggatacc tgccttgcct gctcgaaggg
     1561 cacggtgaac cagaatctac ttcccgtgcc gggttcactg tccaccccga tctcacctcc
     1621 ctaaactcga ctaattggcg gcagatcgcg agacccaggc cggtgccgct atacttacgg
     1681 gtggtggatc cgtccacctg actgaacggc tcaaagatgt acgcttgggc ctcgcagggg
     1741 atgccgatgc cggtatcttt tacctcgaaa cgtagccatg ttctgttttc ttgtgctgcc
     1801 atgtacgaaa ccgtgatcgc tacctcgccg tgctcggtga actttacggc gttgccaacg
     1861 agattaatca gtaactggcg gacgcggcta gggtctccct gcactcgagc agggacttct
     1921 tccgaaatcc ggtagtaacc cagatcgagg tgtttgcgtc gcgcctgacc tgcaagtaag
     1981 cccactacat catcgaggag gtcctgcaag cagaaatcaa cgggctggac cttcagctta
     2041 cctgattgca ggcgggagaa atccagtatg tcctcgatt
//
LOCUS       DASQSL010001391         1911 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_90503, whole genome shotgun sequence.
ACCESSION   DASQSL010001391 DASQSL010000000
VERSION     DASQSL010001391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1911)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1911)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1911
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90503"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            41..703
                     /locus_tag="VE844_14275"
     CDS             41..703
                     /locus_tag="VE844_14275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002706504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HZC02469.1"
                     /translation="MNGNRQRKPMRSVAFLSQKGGSGKTTLAVHVAVAASEAKEKVVL
                     IDTDPQASAADWGTARKRAGINGYPAIEKATASTITHALDRARHENATLAIIDMAPHA
                     TAGVDVIASTADMLLIPCRASAFDLRAIAASVNVVKAARKPAAFILNACDSRIPEVQE
                     AKDVLARHGLQVVPIDIGQRVSFARAVASGQSVTEFEAQGKAAKEIVALWRWIKKQLG
                     SL"
     gene            703..957
                     /locus_tag="VE844_14280"
     CDS             703..957
                     /locus_tag="VE844_14280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02470.1"
                     /translation="MPKPKNTGLAAFTETQEDEEKKPARRRGKGEGEWVHNQLRMTHE
                     QWELIHQFAFSQKKSINKLALLGISKLREEKGLPPLPDLE"
     gene            1077..>1911
                     /locus_tag="VE844_14285"
     CDS             1077..>1911
                     /locus_tag="VE844_14285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02471.1"
                     /translation="MNDTLQLPSDHVNGKNMDGKEITLARSRPRQLELFQSFLPDDQD
                     KYSNTIELYDAIPKYFPVKHMGARRIHGTYLPILTRTFEHKKEEYKLEIRPARLSHKD
                     ETEREYYPTHREELVEDTLRRIACDRLNGVFLDDRAGVQFTLYELKKELNARGHSLNL
                     PDLIEALRICNAASLTLLNKAGTAIVQSPIFPVLLIANKEEWLKSPKSTRCYVQFNPL
                     VTASINHISYRQYDYLTYMSYKHRLSRWLHKRLSHNYTQASLTTLYKIRMSTILRDSG
                     SY"
BASE COUNT          469 a          586 c          502 g          354 t
ORIGIN      
        1 taatatccgt tcatccgtca attgatgaat ggatacatcc atgaatggaa accgccaaag
       61 gaaacctatg cgctctgtcg cgtttctaag tcagaaaggt gggagcggta agacgacgct
      121 ggcggtccat gtcgccgtcg ccgcgtccga agcgaaagag aaggttgtcc tgatcgacac
      181 cgacccccag gccagcgctg cggattgggg cacggcccgc aaacgggcag gcatcaacgg
      241 ctatccggcg atcgagaaag ccaccgcctc aaccatcacg cacgccctcg atcgagcccg
      301 gcatgaaaac gcgacgctcg ccatcattga catggcaccg cacgccacgg ccggcgtcga
      361 cgtcatcgcg tccacggcgg atatgctgct gatcccttgc cgcgcctcgg cgttcgacct
      421 ccgggcgatc gctgcgagcg tcaacgtcgt taaagccgcc cgcaagccgg ccgctttcat
      481 cctcaatgcc tgcgactccc gcatcccgga agtccaagaa gcaaaagacg tcctggctcg
      541 ccacggtttg caggtcgtgc cgatcgacat cggccagcgc gtgtccttcg cgcgcgccgt
      601 ggcttccggc cagtccgtca ccgagtttga ggcccagggc aaagccgcga aagagatcgt
      661 cgccctgtgg cgctggatca agaaacaatt agggagcctg taatgccgaa acccaaaaat
      721 accggcctcg cggccttcac cgaaacccag gaagacgaag aaaagaagcc cgcgcggcgg
      781 cgcggaaaag gcgaggggga gtgggtccat aaccagctgc gcatgacgca tgagcagtgg
      841 gagctgatcc accagttcgc gttttcgcag aagaagagca tcaacaagct cgcccttctc
      901 gggatctcaa agctgcgcga ggaaaagggt ttaccgcccc ttcctgatct tgaataaatt
      961 gatggatgta tgcattgatg gatgcataca ttgaggcgga tgcaggatat ccctcagtaa
     1021 atgctcaata ctggacggct gaaacggaag cagctataac cacgcaggat atcccgatga
     1081 acgacaccct ccagctgcca tctgaccatg tgaacggcaa aaacatggac ggaaaggaaa
     1141 taacgttggc ccggtcacgg ccgcgacagt tagagctctt ccaaagcttc cttccagatg
     1201 accaagataa atattccaac accatcgaat tatatgatgc catcccgaag tattttcccg
     1261 taaagcatat gggcgctcgc cgcattcacg gcacgtatct tcctatcctc acgcggactt
     1321 ttgaacacaa gaaggaagaa tataaattgg agatccggcc ggcgcggctc tcccataagg
     1381 atgaaaccga gcgggaatac tatcccaccc accgcgagga gctggtcgag gataccctgc
     1441 gccggattgc ctgtgaccgc ctcaacggcg ttttcctcga cgatcgcgcc ggcgttcagt
     1501 tcacgctcta cgagctcaaa aaagagctaa acgcgcgcgg tcattccctt aatttacccg
     1561 atctcatcga agcgcttaga atttgcaatg cggcctcgct gacgctgctg aacaaggccg
     1621 ggactgccat agtccagtca cccatattcc cggtcctcct tattgccaac aaggaggaat
     1681 ggctcaagag cccgaaaagc acgcgctgct atgtccagtt caaccccctc gtgaccgcct
     1741 ccatcaacca tatttcctac aggcagtacg attatttaac ctatatgtcg tacaagcacc
     1801 ggctctcgcg gtggctccac aagcggctct cgcataacta cacccaggcg agcctcacga
     1861 cgctctataa gatccggatg agcaccatcc tgcgggacag cgggtcctac t
//
LOCUS       DASQSL010001392         1159 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_160213, whole genome shotgun sequence.
ACCESSION   DASQSL010001392 DASQSL010000000
VERSION     DASQSL010001392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1159
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160213"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            41..331
                     /gene="rplW"
                     /locus_tag="VE844_14290"
     CDS             41..331
                     /gene="rplW"
                     /locus_tag="VE844_14290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011876606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HZC02472.1"
                     /translation="MMDPYGIILRPLVTEKSLGQHTERNKVSFLVAPNANKQQIRGAV
                     ESIFAVKVIDVNTVYVKGKRKRVRMREGKRPDQKKAIVTLREGDKIEFFEGL"
     gene            346..>1159
                     /gene="rplB"
                     /locus_tag="VE844_14295"
     CDS             346..>1159
                     /gene="rplB"
                     /locus_tag="VE844_14295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011955942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HZC02473.1"
                     /translation="MGLRNFKPTSPGLRQMSASTFEEVTKTSPEKRLLRPVKKTGGRN
                     SYGRVTVRFRGGGHKRRYRVIDFKRDKAGIPAKVAAIEYDPNRSARIALLHYIDGEKR
                     YILAPDGLRVGDRVMSGQEAEIRTGNALALRHIPLGTLVHNVELTRGRGGQLARAAGS
                     SAQLMAKEGNHAQLKLKSGEVRMVRLECMATVGQVGNTDHENISIGKAGRKRWLGKRP
                     HVRGVAMNPVDHPHGGGEGKAGQGNPHPVSPWGWPTKGAKTRGKRPSDKYIVR"
BASE COUNT          293 a          299 c          362 g          205 t
ORIGIN      
        1 cgaaggatgc cctgataaag ctgcaagaga gggtagcatc atgatggacc cctatggtat
       61 catcctgcga ccgttagtga ccgagaagag cctggggcag cataccgaac gtaacaaggt
      121 gagcttcctc gtcgccccca acgcaaacaa gcagcagatc aggggagcgg tagagagcat
      181 ctttgcggtg aaggtgatag acgtgaatac cgtgtacgtg aagggcaaac gcaagcgtgt
      241 gcgcatgcgc gaaggcaaac gacccgacca gaaaaaagct atcgtcacgc tgcgtgaagg
      301 tgacaagatc gagttctttg aggggttata ggcgaggaat accccatggg cctgagaaac
      361 tttaagccaa catctcccgg tttacggcag atgagtgctt cgacctttga ggaagtaacc
      421 aagaccagcc cagaaaagcg gctcttgcgg cccgtcaaga aaacaggagg acgcaatagc
      481 tacgggcggg taacggttcg tttccgcggc ggggggcata agcgacgcta tcgagtgatt
      541 gattttaagc gggataaggc tggtatcccc gccaaagttg cggcaatcga gtacgacccg
      601 aaccgttcgg cacggatcgc cctgctccat tatatcgatg gagaaaagcg ctacatcctg
      661 gccccggatg gtctccgcgt cggagatcgg gtaatgtccg gccaagaagc ggaaattcgt
      721 actgggaacg ccttggcttt gcggcacatc ccactcggga ctctggtcca taatgtcgag
      781 ctcacccgag gacggggggg gcagctcgcc cgagcagccg gctcctctgc tcagctcatg
      841 gccaaagaag gcaaccacgc gcagctgaag ttaaagtcag gcgaggtgcg tatggtgcgt
      901 ctagaatgca tggccaccgt tgggcaggtg ggtaataccg atcatgagaa catctcgatc
      961 ggcaaagctg gtcggaagcg ttggctaggc aaacggccgc atgtgcgtgg cgtcgccatg
     1021 aatccggtcg atcatccgca tggcggcggc gagggcaaag ctggacaagg caatcctcat
     1081 ccagtcagcc catgggggtg gccaacgaaa ggggcaaaaa cccgtggcaa gcgtccctct
     1141 gataaataca ttgtgagac
//
LOCUS       DASQSL010001393         2543 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_104789, whole genome shotgun sequence.
ACCESSION   DASQSL010001393 DASQSL010000000
VERSION     DASQSL010001393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2543
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104789"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(131..1642)
                     /gene="purF"
                     /locus_tag="VE844_14300"
     CDS             complement(131..1642)
                     /gene="purF"
                     /locus_tag="VE844_14300"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005370399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HZC02474.1"
                     /translation="MCGIIGIVAKSRVNQALYDGLTVLQHRGQDAAGIVTCHEGRFYI
                     RRSEGLVRDVFHTRHMVRLIGAMGIGHVRYPTAGSSSPAEAQPLYVNSPYGITLAHNG
                     NLVNAEQLKQELFRENLRHINTDSDSEVLLNVFADELQRLGKFRIGPEDIFQAVRRLH
                     ERCHGAYAAVAMITGVGIVGFRDPHGIRPLIFGKRITELGDEYVIASESVAIDMLGFK
                     TIRDVEPGEAVFISSQGSLHTEQCTDDPCHTPCIFEYVYLARPDSIIDRISVYKARLR
                     MGELLARKLNRLWPNHDLDVVIPIPDTSRTAALQLANELGLKYREGFIKNRYIPRTFI
                     MPGQKLRKNSVRQKLNAIDLEFRGRNVLLVDDSIVRGTTSRQIIQMAREAGANKVYFA
                     SAAPPVRYPNVYGIDIPSEQELIAHHRTEQEIAKILGADGLIYQDLEDLIEAARKGNP
                     ALTRFDTSCFSGQYVTGDVNQGYLEHLALQRSDEAKSRREGSSNKLVDLQIIT"
     gene            complement(1710..2198)
                     /locus_tag="VE844_14305"
     CDS             complement(1710..2198)
                     /locus_tag="VE844_14305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012637827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HZC02475.1"
                     /translation="MNWADYIILAIILLSVLISVGRGFVREVLSLLGWVAALWVSISF
                     SPALSERLYSAVSVPSMRRLLGFLTLFIATLLVAAGVNYLITKLIIKTGLSSTDRALG
                     ILFGAARGIAIVAIVVLMAGLTPLPQDPWWEESLLLKHFQSLALWIRSYLPEDIAKHF
                     SF"
     gene            complement(2273..>2543)
                     /locus_tag="VE844_14310"
     CDS             complement(2273..>2543)
                     /locus_tag="VE844_14310"
                     /inference="COORDINATES: protein motif:HMM:NF016895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HZC02476.1"
                     /translation="PAPPPAAKAEKWAGTHVVQLASFSSEGKAVALKTRLRKRGYNAF
                     VERIPLRGGKLFRVRIGPLSELKAKKLQAKLAKDINLQGMVIRSR"
BASE COUNT          614 a          710 c          666 g          553 t
ORIGIN      
        1 atcggttcgc tttgctctga ctctagagtc cgaatgtgcc ctgcgcgtac cgcccgggta
       61 ttaaaccccc attcctcgtt atccatcatg aaattgctgt gtacttgtca atcggaagtc
      121 agtaggcgcc tcaggtaatg atctgaagat cgaccaattt attgctgctt ccctcacgtc
      181 gagacttggc ttcatccgag cgttggaggg caaggtgctc aagatagcct tgattgacat
      241 cgccggtgac atactgtccc gaaaaacagg aggtatcaaa ccgggtaagc gctggattac
      301 ctttgcgcgc agcctcgata aggtcctcca gatcctgata gataagccca tcggccccca
      361 agatcttggc aatctcttgt tccgtccggt gatgggctat caactcttgt tcagagggga
      421 tatcgatgcc atagacattt ggataacgca caggcggcgc cgctgaagcg aaatagacct
      481 tgttggcacc cgcctcccgg gccatctgga tgatctgcct cgaggtcgtg ccgcggacga
      541 tggaatcgtc taccagcagc acatttctcc cccggaattc aagatcaatg gcattgagct
      601 tttgccgcac cgagttctta cgcagctttt gtccaggcat gatgaaggtg cgcgggatat
      661 aacgattctt gataaatcct tcgcgatact tgagccccag ttcattggcg agctgtaagg
      721 ccgcggttcg gctggtatcg gggatgggga tcaccacatc gaggtcgtgg ttcggccaca
      781 atcgatttag cttacgcgcc agcagctcgc ccatgcgcag gcgcgcctta tacacagaga
      841 tccgatcgat gatcgaatct gggcgggcga gatagacata ctcgaagata cagggagtat
      901 gacaaggatc atcggtgcat tgctcggtat gcaagctccc ttgactggag ataaataccg
      961 cctccccagg ctcaacatcg cggatcgttt taaatcccag catatcaata gctacactct
     1021 ctgaggcgat gacatactca tcgccgagct ctgtgatccg cttgccgaat atcaacggac
     1081 ggatgccgtg gggatctcta aacccgacga tccccacacc ggtgatcatc gccacagcgg
     1141 catatgcccc gtggcaacgc tcatgcaggc ggcggactgc ctggaagata tcttcagggc
     1201 ctatccggaa tttacccaaa cgctgcaact catccgcaaa tacattgagc agcacctcgg
     1261 aatccgaatc ggtattgata tgccgaagat tctcccgaaa cagttcctgt ttgagctgtt
     1321 cggcgttgac cagattaccg ttatgggcca gcgttatacc gtagggtgag ttcacataca
     1381 agggctgtgc ttcggccgga gaggaactgc ctgccgtagg atagcgtaca tggccaatcc
     1441 ccatggcgcc gatcaatcgg accatatggc gggtgtggaa gacatcccgg accagcccct
     1501 cggatctgcg gatatagaaa cgtccttcat ggcacgtcac gatccctgca gcatcctggc
     1561 cccggtgttg gaggacggtg aggccatcgt agagcgcctg attgaccctg cttttggcaa
     1621 ctatcccaat gatcccgcac ataatcgtct aggtaaacgc gttatctaga aagattaaga
     1681 taaaccatgg cctttcggcg agcaacagct caaaaactga agtgcttcgc tatatcttcg
     1741 ggcagataac tgcgtatcca taaggccaag gactggaaat gcttaagcaa aagcgactcc
     1801 tcccaccatg gatcctgagg caaaggggtc agacccgcca tcaacaccac tatagctacg
     1861 atagcgatac cgcgcgccgc accaaagagg atacccaagg ctcgatcggt gctgcttaga
     1921 cccgttttta ttatcaattt ggtgattaaa taattgaccc cggccgccac cagcagggtg
     1981 gcgatgaaga gggtcaaaaa acccaacaag cgccgcatcg aaggcactga aaccgcacta
     2041 tacaggcgct ctgaaagagc gggcgaaaag gagatggaga cccaaagggc cgcgacccag
     2101 ccgagcaaag acaatacctc gcgcacaaac cctctgccga cgctgatcaa gaccgatagg
     2161 agaatgatcg cgaggataat gtaatctgcc caattcatga atcactcgcc aaagcaccct
     2221 cttgcagagg tttagcaaac tgccgatgag agccacgcga tgcacatcgg tcttaccgag
     2281 accggatcac catgccctgg aggttaatat ctttcgcaag cttggcttga agttttttgg
     2341 ccttgagctc ggacagaggc ccgatccgca cgcggaatag ctttccaccc cttagcggga
     2401 tccgctcgac aaaggcgtta tagcctcgct tccgaagtcg ggttttgagg gccactgcct
     2461 ttccctcgct gctaaagctc gcgagctgaa cgacatgagt tcctgcccac ttctcagctt
     2521 tggctgccgg tgggggggct ggg
//
LOCUS       DASQSL010001394         2212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_188827, whole genome shotgun sequence.
ACCESSION   DASQSL010001394 DASQSL010000000
VERSION     DASQSL010001394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2212
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188827"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..595)
                     /locus_tag="VE844_14315"
     CDS             complement(<1..595)
                     /locus_tag="VE844_14315"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HZC02477.1"
                     /translation="MRPLAGLKVLDFCWVAVGPMTTSYLAEYGATVVRIESKRRPETL
                     RNAPPFGSPGQSVNRSGYFANYNANKYGIGVNMVHPQARDFVKRLVAWADLVTENFTP
                     GTLEDWGLGYEDLRQIKPDIILFSTSMLGRGGPYSKQPGFGAVLASLSGMTGLTGWPD
                     RMPTNPYGAYTDFLVPRFTVPTILAALDYRRRTGRGQH"
     gene            complement(701..1948)
                     /locus_tag="VE844_14320"
     CDS             complement(701..1948)
                     /locus_tag="VE844_14320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012160803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3 family transposase"
                     /protein_id="HZC02478.1"
                     /translation="MDDIIQVPLNLPDVRVLSTQRNAQGHWLIRVESTLEGTQCRRCG
                     REIRELHGLDAVVRLRHLPLFDVPVFVEIRPKRYRCPYCAGKPTTTQRCAWYEPRSPN
                     TKVYEQWALRMLINSTVADAARKLGVSEESIDGLLDRWIERSVDWEAWERLGVIGLDE
                     IALKRGHRDVVVLVTVPLEEGGVEILAVLADRKKETVIAFLRTVPEPLRHTIERACTD
                     MYEGFVRAIEEEVPWAEIVIDRFHVARAYRDGADTVRKQELKRLKRALPKAEYAQIKG
                     AMWPFRKRPEDLEPQEWERLERLFTYAPKIEAAYHLREDLTDLFERHYTKAGAKCAIR
                     AWCKRVRQSGLVEFESFLGTIERWMDEITNYFQGRQTSGFVEGFNNRVKVLMRRCYGI
                     FNVGRLFQRLTLDLHGYQLFSHT"
BASE COUNT          444 a          695 c          629 g          444 t
ORIGIN      
        1 aatgctgccc acgtccggtg cgtcgccgat aatcgagcgc agccaggatc gttgggacgg
       61 taaagcgcgg gaccagaaag tcggtataag cgccataggg gttggtgggc atgcgatcag
      121 gccagccggt gaggccggtc atcccgctca gcgaggcgag gacggcgcca aagcccggtt
      181 gtttagaata cggccctccc ctgccgagca tcgaggtgct gaagaggatg atgtcgggct
      241 tgatttggcg cagatcttcg taccctaacc cccagtcctc cagggtcccg ggcgtaaagt
      301 tttcggtgac aaggtcggcc caggccacca ggcgcttgac gaaatcgcgc gcctgcggat
      361 ggaccatgtt gacgccaatg ccatatttat tcgcgttgta gttggcgaaa tacccactac
      421 ggttcacact ctgccctggg ctgccgaagg ggggcgcatt gcggagcgtc tcagggcgcc
      481 gtttcgactc gatccgcacc accgtcgccc cgtattcggc gagatatgaa gtcgtcatcg
      541 gccccacggc cacccaacag aaatctaaca ctttcagccc tgccagcgga cgcatggaca
      601 aacctccgta acggatagtg ctgagtgctg agtcctgagt gctgagtaaa aaaagaggct
      661 ctcccggaat tcccgtggtt ggccacgagg ggttatgagg tcaggtgtgg ctgaagagtt
      721 ggtagccatg caagtcgagc gtgagccgtt ggaagagcct tccgacgttg aagatcccgt
      781 agcagcgcct catgagcacc ttcacgcggt tgttgaatcc ttccacaaac ccgctggtct
      841 gccgaccctg aaagtaattc gtgatctcat ccatccatcg ctcgatcgtc cccagaaagc
      901 tctcgaactc aaccagtcca ctttgacgca cccgcttgca ccaggcccgg atggcgcact
      961 tggcccccgc cttcgtgtag tggcgttcga acaggtctgt gaggtcctct cgcagatggt
     1021 aggcagcctc gatcttgggc gcgtaggtga agagccgctc gagccgttcc cactcctgcg
     1081 gctcgagatc ctcaggccgc ttacgaaacg gccacatcgc ccccttgatc tgggcgtatt
     1141 cggccttggg caatgctcgc ttgagccgct tgagttcctg cttgcgcacc gtgtcggcac
     1201 cgtcgcggta ggcccgcgct acgtggaacc gatcgatgac gatctcggcc cacggcactt
     1261 cctcctcgat cgccctcacg aagccctcat acatatccgt gcacgcgcgc tcgatggtat
     1321 gccgcagcgg ctcggggacc gtgcgcagga aggctatgac cgtctctttc ttgcggtccg
     1381 cgagcaccgc caggatctcg acaccgccct cctcaagcgg caccgtcacc aacacgacaa
     1441 catctcggtg cccgcgcttg agtgcgatct cgtcgaggcc tatcacgccc aggcgctccc
     1501 aggcctccca gtcgacgctg cgctcgatcc agcggtcgag gaggccatcg atgctctcct
     1561 ccgagacccc gagcttgcgg gccgcgtccg ccactgtgga gttgatcaac atccgcaagg
     1621 cccattgctc gtagactttc gtgttggggc tgcgcggctc ataccaagcg caccgttgcg
     1681 tcgtcgtcgg cttgcctgca cagtaggggc agcgataccg tttggggcga atctcgacga
     1741 agacgggcac gtcgaacaag ggcagatggc gcaggcgcac gaccgcatcc agcccgtgca
     1801 actcacgaat ctcccgacca cagcggcggc actgggtccc ttcgagggtg ctctcgacgc
     1861 gaatgagcca gtgcccttgc gcatttctct gggtcgagag gacacgcaca tcgggcaagt
     1921 tcaacggcac ctgaatgatg tcgtccatag cgacgccccc agtgaacctg cgccgccatc
     1981 atcttacaaa cgtgctccct cactctatca tactgatgat ccatcacggc aattccggga
     2041 gagcctaaat aagacggcct tggctcggag aggagaacgt cgcttactgt tccctcatct
     2101 atgccatcga aagatttgac gtataatacc tctacagagg ctgttaaact gcaaaaactc
     2161 tatataaacc gccttatttg gagattagat aaatatatac cttatggtca tc
//
LOCUS       DASQSL010001395         1476 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_132794, whole genome shotgun sequence.
ACCESSION   DASQSL010001395 DASQSL010000000
VERSION     DASQSL010001395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1476)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1476)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1476
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132794"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..868
                     /gene="yidC"
                     /locus_tag="VE844_14325"
     CDS             <1..868
                     /gene="yidC"
                     /locus_tag="VE844_14325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013221919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HZC02479.1"
                     /translation="MLQHYFVVALVPERGAGYHYYSMARPGDRYVIGLRSPELRIGQG
                     EQTTAGLKLYIGPKNQQALEQIAPGPELTVDYGWLWFIAKPLFLLLEWFYGLTLNWGW
                     AIILITLLVKLAFFHLSATSYKSMAKLRKLQPRMAAIRERYGDDRQRAGQAVMELYRQ
                     EKVNPMGGCLPIVVQIPVFIALYWVLLESVELRQASFMLWLDDLSTPDPYFVLPLLMG
                     ISMYVQQKLSPVPTDPIQQKIFQYLPWIFMLTFALFPSGLVLYWVVSNIVSIAQQWVI
                     TRRYGDMAHSAT"
     gene            912..>1476
                     /locus_tag="VE844_14330"
     CDS             912..>1476
                     /locus_tag="VE844_14330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002708934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HZC02480.1"
                     /translation="MSSKEDTIAAIATPPGRGGIGIVRISGPRVQAVASALLPRLPSP
                     RIALFTAFLGSDREPLDDGIALFFPAPHSFTGEDVLELQGHGGPVVMDILLQRVLSLG
                     IRLARPGEFTERAFLNGKLDLAQAEAVADLITSTTHQAARSALCSLQGAFSERVYGLV
                     DGLIRLRTLVEGALDFSEEEGLDLLDDA"
BASE COUNT          295 a          405 c          411 g          365 t
ORIGIN      
        1 catgctgcaa cactacttcg tagtggcgct cgtcccggag cgcggtgccg gataccacta
       61 ttattctatg gcacgtccag gtgaccggta cgtgatcggt ctgcgtagcc cggaattaag
      121 aattggccag ggagagcaga caacggctgg attgaagctc tatatcggtc caaagaacca
      181 gcaggccctc gagcagatag cgcctggtcc ggagctcact gtcgactacg gttggctttg
      241 gtttattgcc aagcccctct tcttactgct tgagtggttc tatgggctca cactaaattg
      301 gggctgggcc atcatactca tcaccctact tgtcaaactg gcattcttcc atctctcggc
      361 gacaagttac aaatcgatgg ccaagctgcg caagctacaa ccccgcatgg cagcgatccg
      421 cgaacgctat ggggatgacc gacaacgcgc cggtcaagcc gtgatggagc tctatcggca
      481 agaaaaggta aaccctatgg ggggatgctt gcctatagtt gtccagatcc cggtattcat
      541 tgcactttat tgggtgctgc tcgaaagcgt ggaactccgc caggccagtt ttatgctctg
      601 gctcgatgat ctatccacac ccgatcccta tttcgtgttg cctttgctta tggggatcag
      661 catgtatgtg caacagaaat tgagtcctgt gcccaccgat cctatccagc agaagatatt
      721 tcaatacctg ccctggatat tcatgctgac cttcgcgctt ttcccatcgg gtttggtgct
      781 ctattgggtg gtgagcaata tagtatcgat agcccagcaa tgggtcatta cgcgcaggta
      841 tggggatatg gcccattccg ccacctagtg agggatgaga gacctgtccc caggttcatg
      901 cagtaaaccc ggtgtcttct aaagaggaca ccatcgctgc tatagcgacg ccccccggcc
      961 gaggggggat tgggattgtc cggatatcag gaccccgtgt tcaggcagtg gcaagcgcgc
     1021 ttctgccccg actgccttcc ccaagaatag ccctattcac ggcgtttctc ggcagtgatc
     1081 gggaaccttt ggatgacggt atcgccttgt ttttccctgc cccgcattca tttaccggcg
     1141 aagatgtcct ggaactacag ggtcatggcg gcccagtggt gatggatatt ctgttacagc
     1201 gcgtcctatc tcttgggatc cgccttgccc gcccggggga attcactgaa cgtgcctttc
     1261 ttaacggtaa gctggatctc gcccaagctg aagccgtggc cgatttgatc actagcacca
     1321 cccatcaggc agcgcgcagt gcgctgtgtt cgcttcaggg agcgttttca gagcgggtgt
     1381 atgggttggt ggatgggctt attcggttgc gcaccctggt tgagggcgcc ctcgactttt
     1441 ccgaggagga ggggctcgat ctcctcgatg atgctc
//
LOCUS       DASQSL010001396         1161 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_147234, whole genome shotgun sequence.
ACCESSION   DASQSL010001396 DASQSL010000000
VERSION     DASQSL010001396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147234"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1161
                     /locus_tag="VE844_14335"
     rRNA            <1..>1161
                     /locus_tag="VE844_14335"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          279 a          287 c          388 g          207 t
ORIGIN      
        1 gcgcaatggg cgaaagcctg acgcagcgac gccgcgtgag ggaagaaggc cttcgggttg
       61 taaacctctt tcaggaggga agaagccact cgggttaata gcccagaggg tgacggtacc
      121 tccagaagaa gccccggcta actacgtgcc agcagccgcg gtaatacgta gggggcaagc
      181 gttgtccgga tttattgggc gtaaagagcg tgtaggcggc tagataggtc cgttgtgaaa
      241 actcgaggct caacctcgag acgtcgatgg aaaccatcta gctagagtcc ggaagaggag
      301 agtggaattc ctggtgtagc ggtgaaatgc gcagatatca ggaagaacac ccgtggctaa
      361 ggcggctctc tagtacggta ctgacgctga gacgcgaaag cgtggggagc gaacaggatt
      421 agataccctg gtagtccacg ccgtaaacga tgggtgctag gtgtgggggg tgtcgactcc
      481 ctccgtgccg aagctaacgc attaagcacc ccgcctgggg agtacggccg caaggctaaa
      541 actcaaagga attgacgggg gcccgcacaa gcagcggagc atgttgttta attcgatgcg
      601 acgcgaagaa ccttaccagg gcttgacatg cacaggaatg tcgtggaaac acggcagccc
      661 ttcggggcct gtgcacaggt ggtgcatggc tgtcgtcagc tcgtgtcgtg agatgttggg
      721 ttaagtcccg caacgagcgc aacccctgtc ctatgttgcc agcgtgaagg acggggactc
      781 ataggagact gccggtgaca aatcggagga aggtggggat gacgtcaagt catcatgccc
      841 cttatgtctt gggctacaca cgtgctacat tggccggtac aaagggctgc gatgccgcga
      901 ggcggagcga atcccaaaaa gccggtcccg gttcggattg gaggctgaaa ctcgcctcca
      961 tgaaggcgga gttgctagta atcgcggatc agcaacgccg cggtgaatac gttcccgggt
     1021 cttgtacaca ccgcccgtca caccacgaaa gtcggcaata cccgaagccg gtgggctaac
     1081 ccgcaaggga ggcagccgtc gaaggtaggg tcgatgattg gggtgaagtc gtaacaaggt
     1141 agccgtagcg gaagctgcgg c
//
LOCUS       DASQSL010001397         2008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_24530, whole genome shotgun sequence.
ACCESSION   DASQSL010001397 DASQSL010000000
VERSION     DASQSL010001397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2008
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24530"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..350)
                     /locus_tag="VE844_14340"
     CDS             complement(72..350)
                     /locus_tag="VE844_14340"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZC02481.1"
                     /translation="MIGLKTGNYSLEKAKAEKPDLIFLDIIMPDMDGYATCRALTNDP
                     ETKNIPVIFVTSKGQKADRVWAQMQGGKDLVAKPYSPDQIVEQLKKTA"
     gene            complement(361..1626)
                     /locus_tag="VE844_14345"
     CDS             complement(361..1626)
                     /locus_tag="VE844_14345"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02482.1"
                     /translation="MDSLPPVLLDFISVFRPLMRAEVFDSFTYLLCGLLIGEAKHGTV
                     RASVFAPPEYQPQRLSDLFRCHKLSRQALMAQLTQGVLTTLYGGGLPARLFWLADSTL
                     TEKPFAQRVASVGLFHRAKRIIGRAKHLQGHCYVFAAHLYQTAHKHWASALVGALLYV
                     KGRSIPRLVGDLAQQLRLPAEVRHVWVVDRGIVSRPLVQSLGRLDQYVLGRVRSNQVF
                     YFAPRRQPQRGRRRIYGQKCRVDKLIKHFPERLRHQTATLKVRGKARTVRIYDAEMLW
                     RGVWHDHPCPVRLIIVVVPGLRLKPWYLLTTDLELTPLEAVQAYGGRQQIEVNFDEGK
                     ELGLGHYQGRSGEGVRRWPVFLCIAHALLKLLATQALHIELPALNWAWYKRENTTGQV
                     RRRLTAACRPPISRTKASNPTAEKMKKAA"
     gene            1796..>2008
                     /locus_tag="VE844_14350"
     CDS             1796..>2008
                     /locus_tag="VE844_14350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02483.1"
                     /translation="MIQHNADMQYGALLEPIIKNEIRKDMGGFSNRLAYLTVQVYYSA
                     EESRIINTRVLSYLFGSDTEVYKQVVA"
BASE COUNT          453 a          542 c          572 g          441 t
ORIGIN      
        1 atcatgtcct aaacctccac tccggcatgc gttagtgtgt acatcgttcg tgtccgacaa
       61 cgcgtgaggt cttaggcagt tttcttcaac tgctcgacga tctgatctgg actatagggc
      121 ttggcgacca gatccttgcc accctgcatc tgcgcccaga cgcgatcggc cttctgacct
      181 ttgctggtga cgaagatcac cgggatgttc ttggtctcag ggtcattggt gagcgcccgg
      241 caggtggcgt agccatccat atcgggcatg atgatgtcga ggaaaatgag atccggtttc
      301 tcggccttgg ccttctctaa gctgtagttc ccggttttta agccgatcag tttgttgaaa
      361 ttatgccgct ttcttcattt tctctgcggt agggtttgac gccttagtgc gagaaatagg
      421 tgggcggcag gccgcggtca gacgtcgtcg aacttgtccg gtggtatttt cccgtttgta
      481 ccacgcccag ttgagcgcgg gcaactcgat gtgcaaggct tgggtcgcca gcaacttcaa
      541 gagcgcatga gcgatgcaca agaagaccgg ccagcggcgt acgccttcgc cactgcggcc
      601 ttgataatgc cccaagccca actctttgcc ctcgtcgaag ttgacttcga tttgctggcg
      661 tccgccgtag gcctggacgg cctctaacgg ggtgagctcc agatcggtgg tgagcagata
      721 ccagggtttt aacctcagcc ctggcacgac cacgataatc aggcgcacag ggcaggggtg
      781 gtcgtgccac acccctcgcc atagcatttc agcgtcgtaa atacgcacgg tgcgcgcttt
      841 cccgcgtacc ttgagggtgg cggtctggtg gcgcaggcgc tcgggaaagt gtttgatcaa
      901 cttatctacc cggcacttct gtccgtaaat ccggcggcgg ccccgctggg gttgacggcg
      961 gggcgcgaag tagaagacct ggtttgagcg cacgcgccca agcacatact gatctaaccg
     1021 gcctaaggac tgcaccaacg ggcgactgac gatgccgcga tcgaccaccc agacgtgacg
     1081 cacctccgca ggtaagcgca actgctgggc taaatcaccg accaaccgcg gaatggaccg
     1141 ccctttgacg taaagcaagg cgccgaccag cgcactggcc cagtgcttgt gagctgtctg
     1201 atacaagtgc gccgcgaaga cgtaacaatg gccttggagg tgtttggctc gcccgatgat
     1261 gcgcttggcg cggtggaaca gtcccactga agccacacgt tgggcaaacg gcttctcggt
     1321 caaggtcgag tcggctagcc agaagaggcg ggctggcaga ccacccccat agagcgtagt
     1381 caagacccct tgcgttaact gggccatcag tgcttgccgc gagagcttgt ggcagcggaa
     1441 caaatccgac aagcgctgcg gctgatactc agggggcgca aagacacttg cgcgcaccgt
     1501 gccgtgcttg gcttcgccga taagcagacc acagagcaag taagtaaaac tgtcaaagac
     1561 ctcagcccgc atgagcggac ggaacacaga gatgaaatca agcaggacgg gtggtaagct
     1621 gtccatcagt cgctcctctc gttgtcgttg gttacttcaa cgatgaacga ctgcggcgca
     1681 aagagcaagc tctctgcgcc gcttatttat ctctcaaaaa ccgggaacta cagatcgaat
     1741 agctaaagag aacaaaataa gtgatagcgc cgcaggatca gcgcttcttg agcgtatgat
     1801 tcaacataac gctgatatgc agtatggtgc tctgcttgaa ccgattatta agaatgagat
     1861 tagaaaagat atgggaggtt ttagtaaccg cctggcctac cttactgtac aagtttatta
     1921 ttccgcagaa gaatcgagaa ttatcaatac ccgcgtttta agttacttat ttggcagtga
     1981 tacggaagtc tataaacaag ttgtagca
//
LOCUS       DASQSL010001398         5012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_132830, whole genome shotgun sequence.
ACCESSION   DASQSL010001398 DASQSL010000000
VERSION     DASQSL010001398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 5012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5012
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132830"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            16..135
                     /locus_tag="VE844_14355"
     CDS             16..135
                     /locus_tag="VE844_14355"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02484.1"
                     /translation="MHRSQVIRDFLANGAAQRLHLERLPAYAPELNPGEGLWQ"
     gene            379..924
                     /locus_tag="VE844_14360"
     CDS             379..924
                     /locus_tag="VE844_14360"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC02485.1"
                     /translation="MMKPRLREDERGQLAERFRCTPNRRLRDRYQAILMAARGRPHRQ
                     IAEDLGISVRTLQRWLHAYETGGLEGLVIQWAAGRVPRLPATLAPAILAWVTQGPEGC
                     GLDRANWTYAALAASLYRVHGIAVSESTMRSFCRTHGVRPYRPTSRYLKADPAEQAVA
                     QQDLQVFKKSRGGGTGPTESG"
     gene            902..1471
                     /locus_tag="VE844_14365"
     CDS             902..1471
                     /locus_tag="VE844_14365"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC02486.1"
                     /translation="MVLLSQDEARFSMIPTLQTTLGLKGHRPVVGNWDGHDVVDVFGA
                     LNLVTGHLRTRIVERPRASSGQRPLQAAFVRHLRDLARTYPATRYPRVVLVIDNAPWH
                     KGALSTAWLKHLPHLELYRLPSDSPQLQVIERFWKVLRRRATHNRLFSAVAALKRALR
                     HSLCYDQTLKHRVLAIIQAPNKRTKLSAA"
     gene            2100..3260
                     /locus_tag="VE844_14370"
     CDS             2100..3260
                     /locus_tag="VE844_14370"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HZC02487.1"
                     /translation="MQVKVGMLGAKCMAIQALLMLLYLLGCAPQTHMLGSGDRPLTPT
                     PQISSDEAIFTADPHQTTDMERLVSLWQKRVSQRFTFDYSKGDYPLGPGDVLEVSVPA
                     MEELQSRIVRVSGDGAIALPLIGTVQAAGLTERQLREAIHRRLEKYMRIPHLNLFVRE
                     YRSRQVAVIGAVARPGLYNLASEADTILDMVALAGGMTKDAAARILLLPAEAAEPAQA
                     RALSTALPAQLVSKDPSLLSLKEADPITIDLKQFSRGGSKGHLPLPVRPGDIIMVPDS
                     GQVLVEGWVGKPGSYQITPGLTVLGAVAAAGGPLFAADPNTVRVARNGRDGGKILFTA
                     DLEKIKRGEQLDVSVQEGDVVEVTSSTPKLFPYGVYRFFSSIFHIGAGIPLF"
     gene            3271..>5012
                     /locus_tag="VE844_14375"
     CDS             3271..>5012
                     /locus_tag="VE844_14375"
                     /inference="COORDINATES: protein motif:HMM:NF014732.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GumC family protein"
                     /protein_id="HZC02488.1"
                     /translation="MSELVPSQPMWRSMSPQEQITTPFPSWPVGEGQSMGLRDFCHLL
                     LKHFRLIAVCFLGALIFTGLAMVMITPTYTATTTLLLERQIPQVLEFREVMAESAESN
                     RFSTEHDFYKTQYEVLKSRTLAARIIQEQHLETSSVFAVRGTDKGIVARTWGHAKGWL
                     IGLGTLKGFAQTSPRPEGEHLSAIKAELIDAYLAMLEVQPTRQTQLVKIAFHTPDPQL
                     SVRLADAHAEGYIRRGIELRIRAHEEARRFLEERLVELKDRVEQSEAVLNRYRRHKGI
                     ISLNDKENIVVDRLTDLNRRLTEAEAERIDIEGQVRLIHKGHYVSLPAVINNSLVQSL
                     TRELARLEGEQAHLASLFKSDYPRLAQLQAQVGETRKRLQREIQRVVAGLNSAYQAAN
                     AKERKLRTEMEEQKVAALQLKDASVHYAILAREVDTNRQLYDSTLQRMKEMGVAAELR
                     ASNVSIIDKAEVPRQPSSPKVRKNLLLGMFLGLIGGVGLACLREYLDNTLKTAEEAER
                     YLGLPNLAVIPDFLALSRRGQALWTFPSICRQISRTPAADRDLILAHRAFSAMVEAYG
                     NLRAAILLSRAEESP"
BASE COUNT         1041 a         1432 c         1499 g         1040 t
ORIGIN      
        1 tgggatggcg ccccgatcca tcgcagtcag gtcatccgag acttcctcgc caatggcgca
       61 gcccaacgtc tgcatctgga gcggctcccg gcctatgcgc cggagctcaa cccgggcgag
      121 ggcctctggc aataactcaa aggcgtcgag ctgcgcaacg tgtgctgctc caacatcccc
      181 catttgcggc acgaattacg tgacgcggtg aagcgcgtcc gtcgacgacc gcgtctgatc
      241 accagcttct ttcgaggcgc gaatctttag ccctttgtgg ccggatcagt aactggattt
      301 gctgctatac aaggcgcagg tagttttgtc cggttgatcc tggtatcctc ccgcacgacc
      361 atgagggagg ataagccgat gatgaaaccg cgcttgcgtg aagacgaacg tggtcaactc
      421 gcggagcgct ttcggtgcac cccaaaccgc cggctgcggg atcggtacca ggccatcctg
      481 atggccgccc gtggccgccc gcatcggcag attgctgaag atctggggat cagcgtgcgg
      541 acgctgcagc gctggctcca cgcgtatgaa accggcggcc tcgaggggct ggtgatccag
      601 tgggcggcgg gacgcgtccc ccgccttccg gcgaccttgg ccccggccat cctggcgtgg
      661 gtcacgcaag ggcccgaggg ctgtggcctg gaccgggcca actggacgta tgccgcgttg
      721 gccgcgtccc tctaccgcgt gcatggcatt gccgtcagcg agagtacgat gcggagcttc
      781 tgtcgcacgc atggggtccg tccctatcgc ccgacgtctc gctacctgaa agccgacccg
      841 gcggaacaag cggtggctca acaagacctc caggtcttta aaaaaagccg aggcggggga
      901 actggtccta ctgagtcagg atgaggcgcg cttctcgatg atcccgacgc tgcagacgac
      961 cctggggctc aaagggcatc ggcccgtggt cggcaattgg gatggccacg acgtggtcga
     1021 tgtctttggc gcactgaatc tggtgaccgg tcatctgcgc acgcggatcg tggagcggcc
     1081 gcgcgcctcg tcgggccaac gccccctgca agcagcgttc gtccggcatc tgcgggatct
     1141 ggcacgcacc tatcccgcca ccaggtatcc gcgagtggtc ctggtgatcg acaacgcccc
     1201 ctggcacaaa ggcgccttga gtaccgcatg gctcaaacac ctgccacatc tggagctgta
     1261 ccgactgcca agcgacagcc cccagctcca ggtgattgag cggttctgga aggtgctgcg
     1321 gcgacgcgcg acacacaatc gtctctttag cgcggtggcc gctctcaagc gggctctgcg
     1381 ccatagcctg tgctacgacc aaacgctcaa gcatcgggtg ctcgcaatca ttcaggctcc
     1441 gaacaaacgg acaaaactat cggcggcttg aatagcatac aattttctcc gtttcgtgag
     1501 gtgaccccat tcagcgccaa atgtacgggc gtgcgagctt tgacctcctg cggcagcgtg
     1561 tgctccgtgc ggcttggcca tgatcacgca agctgcggga gagccgagac ctgggatgtc
     1621 cagccagtac gaccgttcgg gacgtttacc tttgacctct ctgcactggc cgagtcggat
     1681 ttttctcaga attttaggca tttactcctt tgtggttgca ttgcgaatgc attgtgctat
     1741 attacgtcct aaaaatttac cctcattcaa aatcaataac ttccgctaac gttacaattc
     1801 taactttcag cgccaatact tccttagata aaacgcctta aggcggaagc ctgccaacgt
     1861 acggttgcga attttccaga aaatcgcttg ccaaggatgc tcttgtcaca gggcatagtg
     1921 caatgctctg gcgtgctgca atgctctgtc acgcagatgc ccttctgccg cttggcaggc
     1981 atgtgagagc taataggcgt gtaaactgga caggcggcat gtgcaggtgg tctagaccag
     2041 tcggtctgga aatgaaattg gtgtcgctgg cggtcaatca atggcaaagg ggccctacta
     2101 tgcaggtcaa agttggcatg cttggagcga agtgtatggc gatccaggct ctgctgatgt
     2161 tgctttacct gctcggatgt gcgccccaga cgcacatgtt gggttcaggc gatcggccac
     2221 taacccctac ccctcagatc agcagtgacg aggcaatatt cacggctgat ccccaccaaa
     2281 ccaccgatat ggagagatta gtttccttat ggcaaaagcg agtgtctcaa cgtttcacct
     2341 ttgattattc taagggtgat tatcctctag gcccgggtga tgtcctggag gtttcagtcc
     2401 ctgctatgga ggagttgcag agccgcatcg tacgtgtgtc gggtgatgga gcaatcgctc
     2461 tccctctgat tggcaccgtg caggctgctg ggctcacaga aagacagctg cgagaggcca
     2521 tccaccgtcg gctggagaaa tatatgcgta taccgcatct caaccttttt gtgcgggaat
     2581 accgaagccg gcaagtggcg gtcattggtg cggtggccag gccggggctc tacaacctgg
     2641 ccagtgaagc tgacaccatt ctcgatatgg tggcattggc agggggcatg acgaaagacg
     2701 ccgctgcgcg gatcctcctc ctgccggccg aggcagccga gcctgcgcag gcgagagcgc
     2761 tttccactgc cttaccggcg cagctggtca gtaaagaccc ttcgctactt agccttaagg
     2821 aggcggaccc tatcacgatc gacctgaagc agttcagccg tggagggtcg aagggtcatc
     2881 ttcctcttcc cgtgcggccg ggagatatca tcatggtccc tgacagtgga caggtcttgg
     2941 tcgagggatg ggtggggaag ccgggctcct atcaaatcac cccggggctt acagtcttag
     3001 gggccgtggc ggccgctggt gggccacttt ttgcggctga tcccaacacc gtgcgggtgg
     3061 cccgaaacgg tagggatggc ggcaaaatcc tcttcacggc cgacctcgag aagatcaaac
     3121 gtggagaaca actggatgtt tcggtccaag agggggatgt cgtcgaagtt acctcctcga
     3181 caccgaagct gtttccttat ggggtatatc gtttcttcag ctcgatattc cacatcggtg
     3241 caggaatacc tcttttttga aggtcgagct atgagcgagc tggtgccatc acagccgatg
     3301 tggcgttcca tgtctcccca ggagcagatc accacccctt tcccgagctg gccggtgggg
     3361 gaggggcaaa gcatgggcct cagggacttc tgccacttac tcctcaagca tttccgactc
     3421 atcgccgtgt gcttccttgg agcccttata tttacagggc tggccatggt gatgataacg
     3481 ccgacctaca ccgcaaccac gacgctactc ttagaacggc aaatcccgca ggtcttggag
     3541 ttccgggagg ttatggctga atcggcggag tctaatcggt tttccacaga gcacgatttt
     3601 tataagacac aatacgaggt cctgaaaagc cgaacgctgg ctgctcggat cattcaggag
     3661 cagcatctgg agacctcctc ggtattcgcg gttaggggaa cggacaaggg catcgtcgca
     3721 aggacgtggg ggcatgccaa gggatggctt atagggctgg gaacactcaa ggggttcgca
     3781 cagacctcgc cgcgacctga aggggaacat ctgtcagcaa taaaagccga gttgatcgat
     3841 gcatacctgg cgatgctgga ggtgcaaccc acccggcaaa cacagctggt caaaatcgcc
     3901 tttcacacgc ctgacccgca gctgtcggta cgcctggccg acgcacatgc cgagggatat
     3961 atccgacggg gcatcgagct gcgcatccgc gcccacgagg aagcgcggcg cttcctggaa
     4021 gagaggctgg tggaactcaa ggaccgggta gaacagtccg aagctgtact caataggtat
     4081 cgccggcaca agggaatcat ctcgctgaac gataaagaaa atatcgtggt ggaccggctg
     4141 acggatctga accggcgcct gaccgaggcc gaagccgaac gcattgatat cgaggggcag
     4201 gtgcgcttga tccacaaggg gcattatgtc tctctcccgg ctgtcatcaa caactctctc
     4261 gttcaatccc tcactaggga gttggcacgt ttggagggag aacaggccca tctggcgagc
     4321 ctgttcaagt ctgactatcc gcgattggcg cagttgcaag cccaggtggg agagacgcgc
     4381 aagcgcctcc agagagagat ccaacgggtg gtggccgggc tcaattcggc ctatcaggcc
     4441 gccaatgcta aggaaagaaa gcttcgcacc gaaatggagg agcaaaaggt cgccgcgttg
     4501 cagctaaaag atgcgtcggt gcattacgcc attctggccc gcgaggttga tactaaccgg
     4561 cagctctacg atagcactct gcaacgtatg aaggagatgg gcgtggccgc cgagctgcgc
     4621 gcctccaatg tgtcgattat cgataaagct gaagtgcccc gacagccctc gagcccgaaa
     4681 gttagaaaaa atctgctcct gggtatgttc ctcggtttaa ttgggggggt ggggctcgcg
     4741 tgtctgcgtg agtatctgga taacaccctg aagaccgccg aggaggccga gcgctacctt
     4801 ggtttgccca atctagcggt gatcccggat ttcttggcgt tgagccgacg gggtcaggca
     4861 ctgtggactt tcccatctat ttgccgccag atctcaagga ctcccgctgc cgatagagat
     4921 ctcatcctgg cccatcgggc cttctctgcg atggtcgagg catatggaaa cctgcgtgct
     4981 gccatcctgc tgtccagagc cgaagaatcg cc
//
LOCUS       DASQSL010001399         3694 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_64433, whole genome shotgun sequence.
ACCESSION   DASQSL010001399 DASQSL010000000
VERSION     DASQSL010001399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3694
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64433"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..516)
                     /locus_tag="VE844_14380"
     CDS             complement(<1..516)
                     /locus_tag="VE844_14380"
                     /inference="COORDINATES: protein motif:HMM:NF013502.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HZC02489.1"
                     /translation="MSFPIVGIGASAGRLEAISELLARLPAESGLALLLVQHLDPDHE
                     SLLAEILAKKTAMPVSKVTEGMVVEPNRLYVIPHNASMAIAGGLLRLQSRNPAQGKHM
                     PIDVLFHSLAEDQGPNAIGVVLSGGGSDGALGIQEIKGAGGITFAQDEASARFSDMPR
                     AAIRLGCVDFIL"
     gene            915..2462
                     /locus_tag="VE844_14385"
     CDS             915..2462
                     /locus_tag="VE844_14385"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007042074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HZC02490.1"
                     /translation="MKQQLIIFDTTLRDGEQSPGASMTKDEKLRIAKALERLRVDVIE
                     AGFPVASRGDFEAVQAVAAAIKESTVCGLARAIDRDIDAAAEALEPALSKRIHTFIAT
                     SPIHMKKKLNMTPEQVLEQAVKAVSRACRYTDDVEFSPEDAGRSEIDFLCRVLEAVIE
                     AGATTVNIPDTVGYSLPTQFGHLIKELIERVPNSDKAIFSVHCHNDLGLAVGNSLAAV
                     LNGARQVECTINGLGERAGNAALEEIVMAVRTRQDQFPCDVKLDTTQIVSCSRLISTI
                     TGFPVQPNKAIVGANAFAHEAGIHQDGVLKSRETYEIMRAEDVGWHANRMVLGKHSGR
                     NAFRTRLKELGVEFAREEDLNDAFIRFKDLADKKHEIYDEDLQALVTETNLAVTNEQV
                     KLIAFKVCSETGEMPKATLTLWIDGDEKTGMAQGSGPVDATFKAIEAIIQSGCNLQLF
                     SVNNITTGSDAQGEVTVRLDQGGRIVNGHGADTDIIVASAKAYINALNKVLATVKRQH
                     PQMSDQI"
     gene            2490..3191
                     /locus_tag="VE844_14390"
     CDS             2490..3191
                     /locus_tag="VE844_14390"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012638710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HZC02491.1"
                     /translation="MNHLQRLYLEAMGIDVWIRRAISSPMPSVAEVPSGASESRTPQE
                     VVEQMDWEALRRTVATCVRCELHKTRTQTVFGVGHLTPQWLIIGEAPGADEDRQGEPF
                     VGRAGHLLNAMLRAIGLKREEVFITNILKSRPPNNRDPRPEEIASCAPFLKRQIQLLK
                     PKIILAVGRIAGQNLLQCTTPIGQMRGKLYSYADTGIPLVVTYHPAYLLRASREKRKA
                     WQDLLFAKKVLSGVS"
     gene            3245..3676
                     /gene="rimI"
                     /locus_tag="VE844_14395"
     CDS             3245..3676
                     /gene="rimI"
                     /locus_tag="VE844_14395"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014780047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008999 -
                     peptide-alanine-alpha-N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HZC02492.1"
                     /translation="MQEPDVQEVAEIERTAYAYPWTEGIFKDCLRVGYSAWVLEWRQR
                     IGAYGVMILTPGESHLLNLCVRPEVQGMGLGRKMLEHLLGVARRCPSKVLFLEVRPSN
                     IPAIDLYRRFGFNEVGTRQGYYPAPQGREDALILAMQLRVP"
BASE COUNT          794 a         1007 c         1115 g          778 t
ORIGIN      
        1 caggataaaa tccacacagc caagcctgat ggcggctcgc ggcatatcgc tgaagcgcgc
       61 cgaggcctcg tcctgggcga aggtgatgcc acccgcaccc ttgatctctt ggatccccag
      121 cgccccgtcc gagccgccgc ccgagagcac cacgccgatg gcgttcggcc cctgatcttc
      181 ggccagcgag tggaacagca catcgatggg catgtgcttg ccctgggccg gattgcggct
      241 ttgcagccgc aacagaccac cggcgatggc catggaggca ttgtgaggga tgacatagag
      301 ccggttcggc tcgaccacca tgccctcggt gaccttgctc accggcatcg cggtcttctt
      361 cgccaggatc tcggcgagca ggctctcgtg atcgggatcg aggtgctgca ccagaagcaa
      421 ggccagcccg ctctcggctg ggaggcgcgc caagagctcg gagatcgcct ccagtctccc
      481 ggccgaggcg ccgatgccga ctatcgggaa ggacattttt cgggctctct catatgttgt
      541 cttcggcttc tcctgtaggg gtaagggatc gctaccgcta tgaactgatt ttagcatgta
      601 gtgattgaac tttcagaaca ggatttggct ggcatttgtg caaagagcag gggtgtggct
      661 gttgtttttc aaacggctag tggctatatt tttatccaac atctgattta tcgagatcaa
      721 ctttgactgc gacggtaaca tagcataatg tatgatgacc ccgacatacc gggcgtgcgc
      781 ctgttgttat tcgtcttgct gggcactcct ccgctgctgc cctgttaggg gcagacaaat
      841 ccacttcaag ccccaaaggg ggtatccaga gtaaaaatca tctaccttca gaaaatcagg
      901 cggagagaca tatcatgaaa caacaattaa tcatctttga caccaccttg cgcgatggag
      961 aacaaagtcc aggggcctcc atgaccaagg acgagaaatt gcgcatcgcc aaggccctgg
     1021 agcgcttacg cgtcgatgtg atcgaagcgg gcttcccggt ggcgagccga ggagattttg
     1081 aggcggtgca agcggtcgca gcggcgatca aggaaagcac ggtgtgtggg ttggcccgcg
     1141 ccatcgatcg cgacattgat gctgcagcgg aggcattaga gcctgcgctc tctaaacgta
     1201 tccatacctt tatcgccacc tcaccgatcc atatgaaaaa gaaattgaat atgacgcccg
     1261 agcaggtgtt ggagcaggcg gtaaaggcag tgagccgcgc ctgccgctac accgacgatg
     1321 tcgagttttc acccgaggat gccggccgct cggagatcga ttttctgtgc cgggtgttgg
     1381 aggcggtgat cgaggccggt gcgaccacgg tcaatatccc cgataccgta ggttatagcc
     1441 tgcccaccca attcggtcac ttgatcaagg aactgattga acgggtgccc aatagcgaca
     1501 aagccatctt ctcggtgcat tgccacaatg acttggggct cgcggtgggt aattccctgg
     1561 cggcggtatt aaatggggcg cgtcaggtgg aatgcaccat caatggtctt ggggagcgcg
     1621 cgggtaatgc agctttagag gagatcgtga tggcggtgcg cacccgtcaa gatcagttcc
     1681 cctgtgatgt taagctcgat accacgcaga tcgtctcttg ttcccgcttg atctccacga
     1741 tcacgggttt tccggtgcag cccaacaagg cgattgtcgg ggccaatgcc tttgcccatg
     1801 aggcggggat tcatcaggat ggtgtgctca agagccgcga gacctatgag atcatgcggg
     1861 ccgaagatgt cggctggcat gccaaccgga tggtgctcgg taaacactcg ggccgcaatg
     1921 cctttcgcac ccggctcaaa gagttgggtg tggagtttgc ccgggaagag gatttaaacg
     1981 atgcctttat ccggttcaag gatctggcag ataagaagca tgagatctat gacgaagatc
     2041 tgcaggcctt agtgaccgag acgaacttgg cggtgaccaa cgaacaggtc aaactgattg
     2101 cgttcaaggt ctgctccgag accggggaga tgcccaaggc caccctcacc ttgtggatcg
     2161 atggcgatga aaagaccggt atggcccagg gcagtggacc ggtcgatgcc accttcaagg
     2221 cgatcgaggc gatcatccag agcggctgta atctacaact cttctcggtc aacaatatca
     2281 cgaccggttc ggatgcccag ggcgaggtga ctgtgaggct cgatcaggga ggacggatcg
     2341 tcaatggcca tggcgcggat accgacatca tcgtagcctc cgccaaggcc tatatcaatg
     2401 ccttaaataa ggtgctggcc acggtgaaac gccagcatcc tcagatgagc gaccaaatct
     2461 gaggcaggct cgactgaggg gatgaagggg tgaaccatct gcaacggtta tatcttgagg
     2521 ccatgggtat cgatgtctgg atccggcgtg cgatttcttc cccgatgccg tctgttgctg
     2581 aggttcctag tggcgcgagc gagtcccgaa cgccgcagga ggtggtggaa cagatggact
     2641 gggaggcatt gcggcggacg gttgccacct gtgtgcggtg tgagcttcat aagacgcgca
     2701 cccagaccgt gttcggtgtg ggccatctta cgcctcaatg gctcatcatc ggcgaggccc
     2761 caggcgctga tgaagatcgg caaggggagc cttttgtagg gcgggccggg cacttattga
     2821 atgcaatgct cagggcgatt ggactcaagc gggaggaggt ctttatcact aatatcctca
     2881 aatcccgtcc gcccaataat cgcgatccaa ggccggagga aatcgcttct tgtgcgcctt
     2941 ttctcaagcg ccagatccag ttactcaagc cgaagatcat cctggcggtg ggcaggatcg
     3001 ccgggcaaaa tctgttgcaa tgcaccaccc ccatcgggca gatgcgtggc aagctatact
     3061 cctacgcgga caccggcatc cccctggtgg tgacctatca tccggcttat ttattgcgcg
     3121 catctcgaga gaaacgcaag gcgtggcagg atctgttatt tgcaaaaaag gtactttccg
     3181 gcgtctcata gatcggatca tcatccatac catgcccgac tcgaggctac tgcagatccg
     3241 ccccatgcag gagccagacg tgcaggaggt cgccgagata gagcgcaccg cctatgccta
     3301 tccctggacc gagggcatct ttaaggattg ccttcgggtg gggtacagcg cctgggtgct
     3361 cgaatggcgg cagcggatcg gcgcctatgg cgtaatgatc ctaaccccgg gggaatccca
     3421 tctcctcaat ctctgtgtca ggccggaggt ccaggggatg ggattgggcc ggaagatgct
     3481 cgagcatctc ctcggggtgg cgcgtagatg cccctcgaag gttctctttc tcgaagtgcg
     3541 gccctcgaat atcccggcca ttgatctcta tagacgcttc gggttcaacg aagtgggtac
     3601 tcggcagggc tattatcccg ccccccaggg ccgggaggat gccttgatcc tggccatgca
     3661 gttgcgcgtg ccctaaatga actaaatacg gagg
//
LOCUS       DASQSL010001400         2007 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_188883, whole genome shotgun sequence.
ACCESSION   DASQSL010001400 DASQSL010000000
VERSION     DASQSL010001400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2007
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188883"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1099..>2007
                     /locus_tag="VE844_14400"
     CDS             1099..>2007
                     /locus_tag="VE844_14400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019009873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 43 glycosylhydrolase"
                     /protein_id="HZC02493.1"
                     /translation="MLLCTGVGAVISPVGAAYDRDNPNGKQYRNPITLEVPAAGGLVE
                     SCADPAVIRGQEPGDNDWYLYCTKDPLNDADRDTDGALNFHNIPMYKSRDLVHWTYVG
                     DVFTAVPMWGEPTSGLWAPEIRYANGQYYLYYVMTDPNEDVSGEADCHFEPAIGIATS
                     ASSMGPWTDLGGPVVEPRRGGDGCNFFWTLDPEVITTDDGRQYIYYGSYYGGIEVREL
                     TQDGLSTQVNTAKMVAIPNRYEATHVIKRNGYYYLFASATNCCNGPLTGYSVFVGRSK
                     DPTGPFVDREGISLLDSRVGGTPVISM"
BASE COUNT          450 a          568 c          539 g          450 t
ORIGIN      
        1 actttcggga ccagattaat tgcaatcaag agggagcacc gacccacaat aactgcaact
       61 cggcccacat tatctgcaac cagaccacaa taagattatc cgacccattt tagttgcaac
      121 taagaaatga cccctggcgc ctacgttaag aaactcatga agtcaacgtc ttatgaaacg
      181 tagatttatt gaccgacttt ctgaaccgag atgtgcctta tttttggaca ggtctattat
      241 gccaacatga gcgttaataa aacctgcgtt ttctttacct tgagtatagt tgcaattaat
      301 tcgggccagt ccatttgatt gtggtcccgt tgcaaataat ccggtcccag gcgattagta
      361 ttgcaggccg ctacaactct atctatctca aaaacggggg tttttgggac tgctttgtta
      421 attaataaca ggtcactgca gtgaattagg aaaggtgtcc tcgctcgcta agccttctgc
      481 agcgcctgcc cggcacccgc gcggccattc gcattactac caatgacctg atttccagcc
      541 agtcccccac cccatccggt ttatctccct gagccgatag tcccctttga ctgtcactcg
      601 cgcgagatgc caaacggtct cgcaatttgg cgcatcggtc cgttgaatgg cccggaaagt
      661 ccccgattct agaccgagga tccctgtatt tgacaactca ctgctctgcc agtacgcttc
      721 tatttgacgg aaaaggcgtt tatttttcct atacgtcacg ggggtaaatc cccaggtgcc
      781 ccacgagtga acgcaacagg aactatcgcc atagttacta taccgccgag gccattgccg
      841 agcgccgtcg cttatcggcc ttgattaggg cgctgcggga tagcttatga gaagtcgacc
      901 tggggtgagg cggtatgata atacaacacc tgaccctacc cttgtactga ccttggggcc
      961 ggagcgaggc gtatgggtat cggacatgcc cgccctggcc ccaactcagc gcagccttcc
     1021 gtgagtgtta ggaacaaccg gagaagaaag atgtgtggac gttccttatg gacgcgacaa
     1081 tgcgcgtccg cattgtcggt gctcttatgc acgggtgttg gcgcggtcat ttcgccggtg
     1141 ggcgcggcgt atgatcggga caatccaaac ggcaagcagt acagaaatcc catcacgctc
     1201 gaggtacccg ccgccggtgg tttggtggaa agctgcgccg atccggcggt gatccgcgga
     1261 caagaacccg gggacaacga ctggtacctg tactgcacca aagaccccct gaacgatgcc
     1321 gatcgtgaca ccgacggcgc gttgaatttc cacaacatcc ccatgtacaa gtcacgcgac
     1381 ctggttcact ggacctatgt cggagatgtg tttactgccg ttccgatgtg gggcgagccg
     1441 acctcgggat tgtgggcgcc ggagatccgg tatgccaatg ggcagtacta cctttactac
     1501 gtcatgacag atccgaacga ggatgtaagc ggcgaagcgg attgccattt cgagccggcc
     1561 atcggcatcg ccacgagcgc aagctccatg gggccgtgga ccgatcttgg cggtcccgtg
     1621 gttgagccgc gccgaggcgg agacggctgc aactttttct ggacgcttga tcccgaggtg
     1681 atcaccaccg acgatgggcg ccagtacatc tactacggga gctactatgg aggcatcgag
     1741 gtgcgagagc ttacccagga tggcctcagt acccaagtaa acaccgccaa gatggtggcg
     1801 attcccaacc gctatgaggc cacccacgtt atcaagcgca acggttacta ctacctgttt
     1861 gcgtccgcca ccaactgctg caacggccct ctcaccggct acagcgtctt tgttggccgc
     1921 tcgaaagacc cgacggggcc cttcgttgat cgtgaaggta tctcgttgct ggatagccgc
     1981 gtggggggca cgccggtcat cagcatg
//
LOCUS       DASQSL010001401         1076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_78164, whole genome shotgun sequence.
ACCESSION   DASQSL010001401 DASQSL010000000
VERSION     DASQSL010001401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78164"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            392..>1076
                     /locus_tag="VE844_14405"
     CDS             392..>1076
                     /locus_tag="VE844_14405"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HZC02494.1"
                     /translation="MIAGGEISMLDVVIVGAGAAGLSAAITAQEQGLSYLVLEQRSLA
                     STVAKMPKRKRIFNTPMKLPLRGSLWFGDTTREELLDKWHAIIGQYDLQVREREGVLE
                     VIRRGDTFHIRSDKYTYEAMRVVLAIGAKGNPRKLGVSGEEESPKVFYWLSDPEAYAD
                     QDILVVGGGDSAIEAALALCERNRVHLSYRRGDFFRLRHRNASAIDASIREGRITVHM
                     NSQVIRIDGD"
BASE COUNT          241 a          276 c          339 g          220 t
ORIGIN      
        1 gttcggttag taatttgtat ttcgcaaaaa gagtgccaac ggagatcgac cgtgccggat
       61 ccacaccatg acaggcttct ggagaggcgc agcttgcgac catccctcag gaggggtgtg
      121 caaagacaca cagcccggcc acgtgtttgc cgacggaatg gagatgtcac cgccctgttg
      181 aacgcttgga ccactgtgta ggaaagagac cagattggtt agatttacgc atgggggaac
      241 tcgcaatcgc aagtcagcat accccgtggt tgccttcctg tctgaaccat gagttacgca
      301 tcccattgca ccccatcttg gggtatactg cgctcatcct gaatgacatt tgaggctgta
      361 ggctttgagg taagcctaga gaagggaact ggtgatagcg gggggtgaga tcagcatgtt
      421 ggatgtcgtc attgtcggcg ctggcgctgc ggggttgagt gcggccataa cggcccagga
      481 gcaggggctg agctatctcg tgctcgagca acgcagcctg gcgagcaccg tggccaagat
      541 gccgaaacgc aagcgcatct ttaatacacc gatgaagctg ccgctgcgcg ggagcttatg
      601 gtttggcgat acgacccgcg aggagctttt agacaaatgg catgccatca ttggacagta
      661 tgacctgcaa gtgcgcgagc gcgaaggggt cctggaagtc atccggcgcg gcgacacgtt
      721 ccatatcaga agtgacaagt acacttacga ggctatgcgt gtggtcctag ccatcggggc
      781 gaaagggaac cctcggaaac tcggggtgtc cggtgaggaa gagagcccga aagtcttcta
      841 ttggttaagt gatccagagg cgtatgcgga tcaagacatt cttgtggtcg gtggggggga
      901 cagcgctatc gaggctgccc tggcactgtg cgaacgcaac cgcgtgcacc tgtcctatcg
      961 ccgtggagac ttcttccgct tgcggcatcg caatgccagt gccatcgacg cgagcatcag
     1021 ggaaggccgc atcacggttc acatgaactc acaggtgatc cgcatcgacg gtgacc
//
LOCUS       DASQSL010001402         1120 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_188900, whole genome shotgun sequence.
ACCESSION   DASQSL010001402 DASQSL010000000
VERSION     DASQSL010001402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188900"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            209..>1120
                     /locus_tag="VE844_14410"
     CDS             209..>1120
                     /locus_tag="VE844_14410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="IS4/IS5 family transposase"
                     /protein_id="HZC02495.1"
                     /translation="MLGEVFERFVDKSPVSVMVRGTLERVLGPDPLDLWFERTATKQY
                     TRDLWFSTVYDLLSQVVFCIQPSVHAAYRAKEAQVGVSVVSVYNKLKEIDPRTSAELV
                     RYSAGQLAPLIEQMGGQREPWVKGYRVKIIDGNCIEASEHRLKELHGVAAGALPGKSL
                     VVYEPVRGLVSDVFPCEDGHAQERSLLGSVLGTVQAKDLWIADRNFCTREFLCDIDTR
                     GGRFVIRQHQGLPFEIVTPLRPLGRVETGQLAEQRIRVVDAQGIAHEFRRLRLKLNHA
                     TRDGATLLYILTNLEARQVSAKRVARLY"
BASE COUNT          234 a          307 c          326 g          253 t
ORIGIN      
        1 cgtgcaggag caatcatcga ctgagtatca aggcgtacac ctaaagatag aggcagcccg
       61 cagctcaatg cgagcgtttc aaacaaacct ccggccgttt tttcatgcca tacctgctga
      121 gatgtatagc cacataggcc agccctttta aggtgatgcg atattgtaca ctataggcct
      181 tctaacattt ggcaatgagg aggccactat gctcggtgaa gtgtttgagc gttttgtcga
      241 caagagcccc gtttcggtca tggttcgtgg cacgctggaa cgggtgctgg ggcctgatcc
      301 cctcgacctg tggtttgagc gtacagccac caagcaatat acgcgcgatc tgtggttttc
      361 aacggtctat gacctgctga gtcaagtcgt cttttgcatt cagccctctg tgcatgccgc
      421 ctaccgggcg aaagaagctc aagtcggtgt atccgtagtg tccgtctata acaaactcaa
      481 agagatcgac cctcgcacct cggcagaatt ggttcgctac agtgctggcc agttggcacc
      541 cctgatcgag cagatgggcg gtcaacgcga accatgggtg aaaggctacc gggtcaagat
      601 tatcgacggc aactgtatcg aagcgagtga gcatcgtctc aaagaactgc acggggttgc
      661 cgcgggtgct ttgcctggta agtcgctcgt ggtctatgaa ccggtgcggg gcttggtcag
      721 cgacgtcttt ccctgtgaag atggccacgc gcaagagcgc tcgttgttgg gctcggtcct
      781 gggcacggtg caagcgaagg acctctggat tgccgatcgc aacttctgca cgcgcgagtt
      841 tctctgcgat atcgacacgc gaggcggccg ttttgtcatc cggcagcacc agggattgcc
      901 gtttgagata gtcacgcccc ttcgcccgct cggccgtgtg gagacaggac aactcgcgga
      961 gcaacgcatt cgggtcgtgg atgcgcaggg catcgcgcat gagtttcgac gcttacgtct
     1021 gaagctcaac cacgccaccc gcgacggtgc gaccttactc tacatcttga ccaatttaga
     1081 ggctcgccag gtctcggcca aacgggtggc gagactctat
//
LOCUS       DASQSL010001403         1793 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_12241, whole genome shotgun sequence.
ACCESSION   DASQSL010001403 DASQSL010000000
VERSION     DASQSL010001403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1793)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1793)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1793
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12241"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            441..>1793
                     /locus_tag="VE844_14415"
     CDS             441..>1793
                     /locus_tag="VE844_14415"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003953 - NAD+ nucleosidase activity
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="toll/interleukin-1 receptor domain-containing
                     protein"
                     /protein_id="HZC02496.1"
                     /translation="MHILLIKSNQEGKEAVAVVPEFEHDVFVSYAHDDNKRPTGTVAQ
                     YGWVTALAHNLNARAGRLQKDLFIDHQLKPGDPFSEDLRRKVKRSALLLIFLSQNYVE
                     SSWCGKELAHFIQTHGDDPAKPLQVFVVELCPYESLTQVPENIAKLRKTLIHAQFWYQ
                     TTDHPFPRLAGDPSPQENDYGGYYWLQLDKLCDALDGRLRELKRRAAPVGPLFSERGD
                     EPLEVPALSTGKASPAVLLADVTDDLVPQRNEVKLALEKEGIRVLPEGDYVGRSATEF
                     NSAFARDAKDSLVFVQMLSTTVGRTPSGGKFPLPQLQFAAAQEARLSIMQWCQAVPEA
                     TMIADPTHHALFKTPFLYAVNLERFKEEVIGKYRKLRQTRETPARSVTEAQKLAKKWV
                     FIDDLVGEKALSQQIRTIVKYANCAIRSLPKQADEGVIEDVLKLCRGGITVYSDRRDH
                     R"
BASE COUNT          413 a          515 c          460 g          405 t
ORIGIN      
        1 tcggccactt ttcatcccca cccttctcac gaaacttcgc tctcctacac gcttgttcta
       61 ttgggtgtgt gagcccgtgt ttttgatgcg agcaagtggt gtgttattct ctttagaggc
      121 agcttatgtc gcttacctct aaaatacaag tcaaatcagt ccattagaat taaacggaac
      181 caatgccaaa ggttgttttc gacccggatt ccgcttcttg gttgaatcat gccaagctcg
      241 cggcgtcgca tggagctggg cttcgttttt gaaaagcgtc atttataaaa cccgcaatta
      301 ctccagcccc gctttccggt aagtacaccc ctagtttggt cgcttgggtg taccccgtcg
      361 agccgtttag ccggcgtcaa tctcccgatt ccccttcaga tacgcgaacg tgatctatcc
      421 tctgatagcc atgtgctttt ttgcatatac tgttaataaa gagcaatcaa gaggggaaag
      481 aagctgtagc tgtcgtccca gaattcgagc acgacgtatt tgtcagctac gcccatgacg
      541 ataacaaacg gcctaccggg accgtagccc agtacggctg ggtcaccgcg ctcgcgcaca
      601 accttaatgc ccgcgcaggc cgactccaga aagatctttt catcgatcac cagctcaagc
      661 ctggcgatcc attcagcgag gatctgcgcc gaaaagtcaa gcggagcgcg ctactcctga
      721 ttttcctctc gcagaactat gttgaatcca gttggtgtgg caaggagctt gcccatttca
      781 tccagaccca cggcgacgat ccagccaagc ctctgcaggt atttgtcgtc gagctctgtc
      841 cctatgaaag tctcacccag gttcccgaaa acatcgccaa gctccgcaag acgctgatac
      901 atgctcagtt ttggtaccag acaaccgacc atcctttccc ccgcttggcg ggggatccct
      961 ctccgcagga gaacgactac ggcggttatt attggctgca gctcgataaa ctctgcgacg
     1021 cactcgacgg gcgccttcgt gagcttaagc gtcgagctgc cccggtaggt ccacttttca
     1081 gcgagcgcgg agatgaacca cttgaggttc cagcactctc gacagggaag gcttcccccg
     1141 ccgtcctact cgccgacgtc accgacgatc ttgtgcctca gcgtaatgag gtcaagctcg
     1201 ccttggagaa agaagggata cgagtcttac ctgagggcga ctatgtcggg cgctcagcga
     1261 cggaattcaa ctcggcattt gcgcgagatg cgaaggacag cctggtattc gttcaaatgc
     1321 tgtcaaccac ggttgggagg acgcccagcg gcggaaagtt tccattaccc cagttgcagt
     1381 ttgcggccgc tcaagaagcg aggctttcca tcatgcaatg gtgtcaggcc gtgccggagg
     1441 caactatgat tgccgatcct acacaccatg cgcttttcaa gacaccgttt ctatacgcag
     1501 tcaacctcga gcggttcaaa gaggaagtga taggcaagta tcggaaacta cgtcagacgc
     1561 gcgaaacacc cgcgagatcg gtcaccgaag cacaaaaatt ggccaagaag tgggtgttca
     1621 tcgatgacct cgtcggcgaa aaagcgctta gccagcagat tcgaacgatc gtgaaatacg
     1681 cgaactgcgc gatacgcagc ctgcccaaac aggcggatga gggcgttatc gaggacgtgc
     1741 tcaagctttg ccgtggcggt atcaccgtgt actccgaccg gcgcgatcac cgc
//
LOCUS       DASQSL010001404         1212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_115625, whole genome shotgun sequence.
ACCESSION   DASQSL010001404 DASQSL010000000
VERSION     DASQSL010001404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1212
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115625"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1027)
                     /locus_tag="VE844_14420"
     CDS             complement(<1..1027)
                     /locus_tag="VE844_14420"
                     /EC_number="2.7.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013809839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008887 - glycerate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HZC02497.1"
                     /translation="MKIVITPDSFKENLTSLEVATAIEKGIKRVLPGAKCIKVPMADG
                     GEGTVQSVVDATAGKLLKKEVVGPLGEPVTAHYGVLGDGKTAVIEMAEASGSPLVPKE
                     RRDPLKATTYGTGQLIIDALDQGAKAIIIGIGGSATVDGGAGMAQALGVRFLQKNKKP
                     IEGYAAGGILDSIASIDMSGIDPRIEDTRITIASDVENPLIGRKGAAYVFGPQKGATP
                     EMVEQLDRNLKVFARAIKKQLGIDVASLPGAGAAGGLGAGLVAFTGAKLRSGIELVIE
                     VTRLKDHLKGADLVITGEGRVDLQTAFGKTPAGIAKAAKRFRVPVIAIGGSLSDDAPM
                     LYEHGIDA"
BASE COUNT          231 a          368 c          311 g          302 t
ORIGIN      
        1 aggcatcgat gccgtgctca tatagcatgg gcgcgtcatc tgagaggctg ccaccgatcg
       61 cgatcacggg gaccctgaac cgcttggcgg ccttagcgat ccctgccggg gtcttgccaa
      121 aggctgtctg aaggtctacc cggccttccc cggtgatcac cagatcggca cctttgaggt
      181 gatccttgag gcgagttacc tcaatcacca gctcgatgcc actcctaagc ttggccccgg
      241 taaacgccac caggcccgca ccgagtccgc cggcggcgcc cgcccctggc aatgaggcta
      301 catcgatacc gagttgtttt ttgatcgcac gtgcaaacac tttaaggtta cggtccaatt
      361 gctccaccat ctctggggta gcgcccttct gtgggccgaa tacataggcg gcgcctttgc
      421 gaccgatcaa gggattctcc acatcggagg caatggtgat tcgagtgtct tctatcctgg
      481 gatcaatccc gctcatatcg atactggcga tgctgtccaa tataccgcct gctgcgtaac
      541 cttcgatcgg ttttttattc ttttgcagaa accgaactcc gagcgcctgg gccatccctg
      601 cgcctccatc caccgtcgcc gatcctccaa taccgatgat gatcgccttt gcgccttgat
      661 ctagagcatc gataatcaac tgaccggttc cataggtggt ggcttttaag ggatcgcgtc
      721 gctccttagg caccaagggt gatcccgaag cctcggccat ttcgatcacg gcggtcttgc
      781 catcgcccag caccccataa tgggcagtca cgggttcgcc taaaggcccc accacttctt
      841 tcttaaggag cttgcctgcc gtggcgtcga ccacggactg gacagtccct tccccaccat
      901 cggccattgg caccttgatg catttggcgc ctggcaaaac ccgtttgatg cccttttcaa
      961 tggccgtagc gacctcaaga gaggtcaggt tttctttgaa agaatcgggc gtgataacga
     1021 tcttcatcgt ttttatcttt ctctctaggg tattttttga actcgggcta tatggcgaac
     1081 gatggtctgt gggcagtgct cggggaaaca ggcccctttc gtgaccggcg gatcagggct
     1141 tgtttcaagg tccattcatc ctcttgttga tcttctcctc ggtctaataa ccgtatctca
     1201 cggccaagct ga
//
LOCUS       DASQSL010001405         1216 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_197815, whole genome shotgun sequence.
ACCESSION   DASQSL010001405 DASQSL010000000
VERSION     DASQSL010001405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1216
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197815"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(81..806)
                     /locus_tag="VE844_14425"
     CDS             complement(81..806)
                     /locus_tag="VE844_14425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02498.1"
                     /translation="MNVTQVQLDELWNFIARKQATTAAPDGESPDESADGRQWVWVSF
                     APEFRLLLAAYVGPRTFQSALHLIQMTAAVVWGVPGFFSDGLSSYWPALIAVYHQIKE
                     FARTGKRGRPRKPVLEPHPELVYAQLVKKKKRGRLHSLNERLCCGAARLTTLGLQIST
                     SLIERFNLTLRHALAPLTRKCWGFCKDRTQLRRRVVFFQAFYNFAPTPKLAVAVARTR
                     AAWGWVDSPQVATTYSGNGGWLD"
     gene            complement(724..>1216)
                     /locus_tag="VE844_14430"
     CDS             complement(724..>1216)
                     /locus_tag="VE844_14430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02499.1"
                     /translation="CILPIVQSVKPNCREDRPLRTATDWGQPCPKPGCSHYSLMNRGN
                     VRAIATYPTQSGRRRIFQCKGCGEQFSETRGTVFFDLRTVEETVILVLKLLLCKVELT
                     ALSFALGVTEGTVLEWLRRAAEKAEEINEHWLARSERHAGSTGRVVELHRAQAGHHSG
                     PGR"
BASE COUNT          257 a          372 c          338 g          249 t
ORIGIN      
        1 ttggtgctca tccgctaata ctttgattta ggattggctc aaatttagcc gtcagtagct
       61 ctctgaaggt ccagacatgg ttagtcaagc cagccgccat tcccggagta cgtggttgcc
      121 acttggggcg aatcaaccca accccaggct gctctggtgc gggcaacggc aaccgcaagc
      181 tttggtgtgg gcgcgaagtt gtaaaacgcc tgaaagaaga ccacgcgacg cctcagttgc
      241 gtgcggtctt tacaaaagcc ccaacacttc cgtgtcaagg gagccaaggc atgccgcaag
      301 gtcaagttga aacgctcaat caaactggtg ctgatctgga gccccaaggt ggtcagccgc
      361 gccgcgccac aacagaggcg ctcgttaagc gagtgcaggc ggcctcgctt cttctttttg
      421 accagttgcg catagaccaa ttcaggatgg ggttccaaca cgggtttgcg ggggcgtccg
      481 cgtttgcccg tgcgcgcaaa ctccttgatt tggtggtaga ccgcgatcag cgcgggccag
      541 taactgctca agccatcact gaagaaaccg ggcacacccc agacaacagc ggccgtcatc
      601 tgaatcaagt gcaaggcgct ctgaaacgta cgggggccga cataggcggc gagcagcagg
      661 cgaaactcgg gcgcgaagct gacccacacc cattggcgtc catccgcgct ctcgtcgggg
      721 ctttcaccgt ccggggccgc tgtggtggcc tgcttgcgcg cgatgaagtt ccacaactcg
      781 tccagttgaa cctgcgtgac gttcacttcg cgctagccag tgctcgttga tctcttcagc
      841 cttctctgct gcacggcgca gccactccag cacagtccct tccgtcacgc ccagcgcgaa
      901 gctcagggcc gtcaactcaa ctttgcacag cagcaacttg agcaccaaga tgacggtctc
      961 ttccaccgtg cgcagatcaa agaagaccgt cccgcgggtc tcagagaatt gctcaccaca
     1021 ccccttgcac tgaaagatgc gacgccgacc gctttgggtc gggtaggtag caatcgctct
     1081 cacattgcca cggttcatca ggctataatg gctacatccc ggcttggggc aaggctggcc
     1141 ccagtctgtg gctgttctca agggtctgtc ctccctacag ttcggtttca cactctgcac
     1201 tataggaaga atacag
//
LOCUS       DASQSL010001406         1024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_188919, whole genome shotgun sequence.
ACCESSION   DASQSL010001406 DASQSL010000000
VERSION     DASQSL010001406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188919"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            192..950
                     /locus_tag="VE844_14435"
     CDS             192..950
                     /locus_tag="VE844_14435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013158859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HZC02500.1"
                     /translation="MFPFLWSLSISFQPPGDVFRWPIKLIPDPATLRNYERLWTEIPF
                     ARWLFNSICVALVVTSANLFLDALAGYVFARMRFPGRSLLFALLLTTLMVPSHVMLVP
                     KFMLLNAFGLINTYTGLIAPAVVQVVGLFLMKQFFESIPRQLEEAARIDGCNRFQIFW
                     KVVLPLSKPALAALGIYTFQGNWNEFLWPLVVTTTSDMFTLPVGLAMFRYEFKVEWTM
                     LMAGSMLITLPTLIIFLTFQRLFIQGVATTGLKG"
BASE COUNT          201 a          288 c          258 g          277 t
ORIGIN      
        1 aagtactttc ggtttgggta tgcctcggcc actgccgtca ttttgtttgc cattatcctg
       61 ctcgtaacac tgatgcagcg gaaggccatt caccctgaga actcgtaatg gcataagtca
      121 tcattatgag ctcttcaata agccggaaga cggcagccct ggggctactg atcgtagcca
      181 ctggagtttt catgttcccg ttcctctggt cgctttcgat ctcatttcag ccgcccggtg
      241 atgtcttccg ctggccgatc aagttgattc ccgatcccgc aacgctgcga aactacgagc
      301 gattatggac agaaatcccc ttcgcccgat ggcttttcaa tagcatctgc gtcgcgctgg
      361 tagtcacatc ggcgaaccta ttccttgatg ccctcgccgg ctacgttttc gcccgcatgc
      421 gtttcccagg acgcagcctg ctctttgcac ttttgctcac aaccctcatg gttccatcgc
      481 atgtgatgct cgtgcccaag tttatgctgc tgaacgcctt cgggctgatc aacacctaca
      541 ccgggctcat cgcaccggcg gtcgttcagg tcgtcgggct atttttgatg aagcagtttt
      601 ttgaatccat cccgagacag ctagaagagg cggcgcgtat cgatggatgc aatcgctttc
      661 aaatcttttg gaaggtggtg ctgccacttt ctaagcctgc actcgccgcg ctcggtattt
      721 atacgtttca gggcaactgg aacgagtttc tatggccgct cgtggtgacc acaaccagcg
      781 acatgtttac gcttccggtc ggattggcga tgttccgcta cgagtttaag gtcgaatgga
      841 cgatgctgat ggcgggctcc atgctcatca ccctgccgac gctcatcata ttcctgacct
      901 ttcagcgtct ttttatacaa ggggtcgcta ccacgggatt aaagggatga agcaggaagg
      961 attctctgga attaaacatg gatgtttaac gacccgccgc ggttgccgct ttgctctcga
     1021 cgac
//
LOCUS       DASQSL010001407         2423 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_64480, whole genome shotgun sequence.
ACCESSION   DASQSL010001407 DASQSL010000000
VERSION     DASQSL010001407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2423
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64480"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..318)
                     /locus_tag="VE844_14440"
     CDS             complement(<1..318)
                     /locus_tag="VE844_14440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006747121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HZC02501.1"
                     /translation="MNDTQLLRYSRQILLPELDLEGQERLLRARVLLIGLGGLGSAVA
                     MYLAAAGIGQLILVDFVRVDLSNLQRQIIHTSADLGRLKVESAKERLLSLNPECRITT
                     LAER"
     gene            complement(315..1163)
                     /gene="prmC"
                     /locus_tag="VE844_14445"
     CDS             complement(315..1163)
                     /gene="prmC"
                     /locus_tag="VE844_14445"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009617451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HZC02502.1"
                     /translation="MSAATIGSLLREAEQQLSASPTPRLDAEVLLCKVLKLQRSHLFS
                     AAYECVHAQARACYEHVIAERACGMPVAYLTGYREFWSLRVEVNPHTLIPRPETEHLV
                     EVALELIRSQGARKLADLGTGTGAIALAIASAYPECQITATDISAEALHVARRNAARL
                     RLHTIAFRHGDWYEALEETAFDLILANPPYIPLAHPCLEEGDLRFEPRLALLGGMDGL
                     EALRRIVAGASKYLRLGGWLALEHGHDQKRALCELLSAAGFYGIRSLRDYGGHDRVIL
                     AQFGRS"
     gene            complement(1180..2256)
                     /gene="prfA"
                     /locus_tag="VE844_14450"
     CDS             complement(1180..2256)
                     /gene="prfA"
                     /locus_tag="VE844_14450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012570503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HZC02503.1"
                     /translation="MKDSFLQKIERLCERQEELHGLLADPGIMSDQAKYRDLSRKYAE
                     LSPIVACFNRYRQNRRAMETAKEMLSDPELRALAQEEIQQTQAWDVELEQELKRVLLP
                     KDPADNSNIFLELRAGTGGEEAALFVADLLRMYTYYVEQRGWGIELLSSSRAEAGGYK
                     EVIARIIGQGAYSRLKFESGAHRVQRVPDTEAQGRIHTSACTVAVLPEVDEITEVEIN
                     PADLRIDTFRASGAGGQHVNKTDSAIRITHLPTGVVVECQDERSQHKNRSRAMSLLRA
                     RLVAAERERQQSAQAENRRSLVGTGDRSERIRTYNFPQGRVTDHRINLTLYKLNEILE
                     GQIDLLIDPLINEHQADLMAAIGG"
BASE COUNT          493 a          736 c          691 g          503 t
ORIGIN      
        1 ccgctccgcc agtgtggtta tcctgcactc tggattgaga gacagcagcc gttctttggc
       61 ggattcaacc ttaagccgac cgagatcagc gctcgtgtgt atgatctgcc gttgtagatt
      121 ggacaggtcg acccggacaa aatcgaccag aatcaactgg ccgatcccag cggcggcgag
      181 atacatcgcc acggctgatc caagaccacc gagcccgata agtagaaccc gggcgcggag
      241 taaccgttcc tgcccttcga gatcgagctc aggcaacagg atctggcggc tgtaacgaag
      301 cagttgggtg tcgttcaaga tctgccgaat tgagctagga taacccggtc gtggccgcca
      361 tagtcgcgca ggctgcggat cccgtaaaac cctgcggcgc tcaaaagttc gcagagggct
      421 ctcttttgat catggccgtg ctcgagggcg agccagccgc ccagccgcag atatttgctt
      481 gcgccggcca cgatccgacg gagggcctcg agtccatcca tacctccgag gagggcgagc
      541 cgaggctcga agcgcagatc cccttcctct aggcagggat gagccaaagg gatgtaagga
      601 ggattggcga ggatcaggtc aaaggccgtc tcttcgagcg cttcatacca atccccgtgc
      661 cggaacgcga tagtatgcaa cctgagacgc gcggcgttcc ggcgcgccac atggagggct
      721 tctgctgaga tatccgtagc cgtgatctgg cattcggggt aggcactggc aatcgccagc
      781 gcaatggcgc ccgtgcccgt cccaagatcg gcgagcttcc gggcgccctg gctccgaatg
      841 agttccaaag ccacctccac caagtgctcg gtttccggtc ttgggatcaa ggtatgaggg
      901 ttcacctcaa cccgtaagga ccagaattcc cgataaccgg tcaagtaggc caccggcatc
      961 ccgcacgccc gctcggcaat cacgtgctca tagcaggccc gcgcttgcgc gtgcacgcat
     1021 tcataggctg cgctgaatag atggctgcgc tggagcttca ataccttgca aagcagcacc
     1081 tccgcatcca atcttggcgt aggagaagca cttaactgtt gctcagcttc cctcaaaagt
     1141 gatccaatcg tcgcagcgct catcggatgc tatttagcct cagcccccga tcgccgccat
     1201 cagatcggcc tggtgttcgt tgatgagcgg atcgatcagg agatcgatct ggccttcaag
     1261 gatctcattc aacttataga gggtcagatt gatgcggtga tcggtcactc ggccttgagg
     1321 aaaattatag gtgcggatcc gttccgagcg gtcgcccgtg ccgacgaggc tacgccggtt
     1381 ttccgcctgg gcggattgct ggcgttcgcg ctcggcggcg acgagcctgg ctctaaggag
     1441 gctcatcgcc cgcgagcggt tcttatgttg ggagcgctca tcctggcatt ccaccaccac
     1501 cccggtgggt agatgggtga tgcggatcgc ggagtcggtt ttattgacgt gctgacctcc
     1561 ggcgcccgag gctcgaaagg tatcgatcct caaatcggct ggattgatct ccacctccgt
     1621 gatctcatcg acctccggca ataccgccac cgtgcaggcc gaggtgtgga tgcgcccctg
     1681 cgcctcggtg tcaggaaccc gctgcacccg atgggcgccc gattcgaact tgagccgtga
     1741 ataagccccc tggccgatga tccgggcgat cacctccttg taaccgccgg cttccgcccg
     1801 gctgctgctc aatagctcaa tcccccagcc gcgttgctcg acatagtagg tatacatccg
     1861 tagcagatcg gccacaaaca aggccgcttc ctcgccgccc gtgcctgccc gaagctcgag
     1921 gaagatattg ctgttgtcgg ccgggtcctt gggaagtaac acgcgtttca gttcttgctc
     1981 aagctcaaca tcccaggctt gggtctgctg gatctcctct tgcgcaagcg cgcggagctc
     2041 aggatccgag agcatctcct tggccgtctc catcgccctg cgattctgcc gatagcgatt
     2101 aaaacaagcg acaatcgggc tcagctcggc gtatttccgg gaaagatccc ggtattttgc
     2161 ctgatcactc atgatcccgg gatccgcaag gaggccgtgc aattcctctt gcctctcgca
     2221 gagccgttca atcttttgta ggaaagagtc cttcattttt taacctctgg taaaacaccc
     2281 cctccctcac cctccccctt aataaggggg agggaagggg tgggggcatc aaggatggac
     2341 tactagacgg cgcatagcct actcggcaaa actatagttt gaaggtaact ttaaagaagc
     2401 aaacctatgt ccagcaatcc cgt
//
LOCUS       DASQSL010001408         1193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_170202, whole genome shotgun sequence.
ACCESSION   DASQSL010001408 DASQSL010000000
VERSION     DASQSL010001408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170202"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..796
                     /locus_tag="VE844_14455"
     CDS             <1..796
                     /locus_tag="VE844_14455"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HZC02504.1"
                     /translation="EWLGFIVTFAFWGWLTKRPGRVVLGVITVSLLLSLMYVVDVDLP
                     SPSGRGGRISVQEIVGRALAPLNPSIAEQYSEHAESYAGTVSWRTEWWRAIWAAVFEN
                     PTTALIGLGYGFPLGDLVPYLHGSVIRTPHNVFFYALGYGGCLGGVVFFGFQMALAHI
                     LLRAYQLTGQPFGLCYWMMTLTGAFFGNYLETPFGAIPFYLILGLAAAPVGSVYDQVA
                     RLRSPLYAGATGQQVCEAFWSHAGASMDAVGGCRLHAPQVLGGREV"
     gene            801..>1193
                     /locus_tag="VE844_14460"
     CDS             801..>1193
                     /locus_tag="VE844_14460"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZC02505.1"
                     /translation="MRILLAHNYYVFAGGEDTVFAAEQVLLRQHGHEVSAYIEHNRRI
                     AGIHRLAAAGQCIWSWTSQHNLQWVLGDGPWDVVHFHNIFPLISPSAYYVCRQLRIPV
                     VQTVHNYRLLCPAATLFRNGKPCEDCLGK"
BASE COUNT          217 a          325 c          351 g          300 t
ORIGIN      
        1 agagtggctc gggttcatcg tcacattcgc cttctgggga tggctcacca aacggccggg
       61 ccgcgtggtg ctcggagtca taaccgtcag cctgctcctt agcctgatgt atgtcgttga
      121 tgtcgatctc ccgagtccat cagggcgcgg cggaagaatt tcggtgcaag aaattgttgg
      181 tcgggcactc gccccgctca atccatccat agccgagcag tattccgagc atgccgagag
      241 ctatgccggg actgtttcct ggaggacaga gtggtggcgg gcgatatggg cggctgtatt
      301 cgaaaatcca acgactgcat tgatcggctt ggggtatggt tttccgctgg gcgacttggt
      361 gccatatcta cacggttcgg tcatccgcac cccgcacaat gtgttctttt acgccctcgg
      421 ctatggcggg tgcttagggg gggtcgtatt ttttgggttc cagatggctc tggcgcatat
      481 acttcttcga gcttaccaac tcactggaca gccatttggc ctatgctact ggatgatgac
      541 gctgaccgga gcttttttcg gcaattacct cgaaacccca tttggcgcca tcccattcta
      601 tctcatcctc ggcttggctg cggcaccggt gggaagcgtc tatgaccaag tggcgaggct
      661 tcgttctcca ctttacgctg gtgccacagg tcaacaggtc tgtgaagcct tctggtccca
      721 tgccggcgcg agcatggacg ccgttggtgg gtgcagactg cacgctccgc aagtgctcgg
      781 cggtcgcgag gtatagactg atgcggattc tgttagcgca taattattac gtttttgctg
      841 gcggggaaga tacggtcttt gccgccgaac aggtgttgct acgccaacac gggcacgagg
      901 ttagcgccta tatcgagcat aatcgacgca tcgccgggat acaccgtctg gccgcagcgg
      961 ggcaatgcat ttggtcttgg acctcacagc ataacctcca gtgggtcctg ggcgatgggc
     1021 cgtgggacgt ggtgcacttt cataatatct ttcccctcat ctcaccttcg gcttattacg
     1081 tctgtcgcca actgcgtatt cctgtggtcc aaacggtaca taattatcgg ttgctgtgtc
     1141 cagcggcgac cctcttccgc aacggaaagc cgtgcgagga ttgtctgggg aaa
//
LOCUS       DASQSL010001409         2716 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_160268, whole genome shotgun sequence.
ACCESSION   DASQSL010001409 DASQSL010000000
VERSION     DASQSL010001409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2716)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2716)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2716
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160268"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(251..>2716)
                     /locus_tag="VE844_14465"
     CDS             complement(251..>2716)
                     /locus_tag="VE844_14465"
                     /inference="COORDINATES: protein motif:HMM:NF033527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3 family transposase"
                     /protein_id="HZC02506.1"
                     /translation="RLIGEQRQRAREAIYERLTTALPSGMAGVLEELLQVPLGKKASP
                     LQRLKANPHSPSPDAMRVLLQKIELIEATGVLQLDLSWLNSNYQRALFHYVNKCSADR
                     LREVVQPRRNAALVCFLWQSYRDAVDQAVDMYDKLITWVHTQAEADLNEQLRQQRKTL
                     QSSLASFKSLGTIVLDDTVPDIDLRIRLFDQIPRDELATQMEALDEWITGKKSDAFHG
                     VISRFSYLRQFAPAFLRALDFKPEAEGPNPCLEALVVIKALNDAHKRTLPAEAPTEFV
                     PKRLQRFIRDKDGKLQKSAWECALLTQLQEEIRAGNLSVAHSKRFGRFDNFFIQDEQW
                     ACLRAGFFQRAGLPQEADQVPDYLRRRLNDAFDRFLETASGNRYATADERGWHLATDP
                     SEKLDPLSECQLDELKDWFAQHMRWIKLPELLIEVDNTLGFTRHFMTPAQRQNPTVED
                     ICTVLAAMMAHGCNIGLYTMVQLVRGIGYKELKRVSDWQMTEEAQRMALTELVSAISG
                     LETSLTWGSGKTSASDGQRFALPRRVLQRTYSPRIRDFALEFYTFLADNYAPYYATPI
                     ECTDRDAPFVLDGLLYNETDLDLEEHYTDTHGYIEINFTAFNLLGKRFYPRIRGLQHQ
                     RIYRLDPDRGYGILTSLVDRADSTLNTDFIAEYWDRMGQFYASLEQGHTTASVALRRL
                     AGFTTKNRFYRANRDLGRIFKTEFILKYMSEPQLRRRIRRGLLKVDQLHALARDVYYG
                     RRGRINARELHEQMNACSCLTLILACIIYWQAKEIDRVLNECDPAGNGINLALLEHIS
                     PIEWDNVVLYGEYVLNRELIRRS"
BASE COUNT          567 a          741 c          809 g          599 t
ORIGIN      
        1 cacggcctta gcggaaaagc aagctattga aggctccaga aaatgacagc cagtagccgt
       61 catccatgag agcttgtaag tagatccgaa aaagttcttt gacagttggc ggcatgtaaa
      121 aggtcgagcc ttagcggacc gcaaaacgcg atctattgaa gagtctgctc aaaaggcatg
      181 tcagtatata tttgacctca gtccctatac gggtattgcc cagatctgtg ttaccacaca
      241 cgctaaggga tcaagatcga cggatcaact ctcggttaag aacatattcg ccatagagca
      301 cgacattgtc ccattcgatt gggctgatgt gctcaagcaa tgccaggttg ataccgttgc
      361 ccgccggatc acattcattc agcacccggt cgatttcttt ggcctgccag tagatgatgc
      421 aggccaggat caaggttaag cagctgcagg cattcatctg ttcgtgtaac tcacgtgcat
      481 tgatccgtcc ccgccgaccg tagtagacat cacgggccag ggcatggagt tgatcgacct
      541 tgagcagtcc gcgccggatg cgacgtcgca gttggggttc agacatatac ttcagtatga
      601 actcggtttt aaagatccgt cctagatccc ggttggcgcg atagaagcga ttcttggtgg
      661 tgaagcccgc cagccgcctc aaggcgaccg aggcggtggt gtggccctgc tccagcgagg
      721 catagaattg ccccatgcgg tcccagtact cggcaatgaa gtcggtgttg agggtgctgt
      781 cggcacgatc gaccagactg gttagtatgc catagccgcg gtcggggtcg aggcgataga
      841 tgcgctgatg ctggagcccc cggatgcggg gatagaagcg cttgcctaag agattaaaag
      901 cagtgaaatt tatctcgatg tatccgtgcg tgtcggtgta gtgctcttcg agatcgagat
      961 ccgtctcgtt ataaagcagg ccgtccagaa cgaaaggggc atcacggtcc gtgcattcga
     1021 tcggcgtggc atagtaaggt gcatagttat cggccaggaa ggtgtagaac tccaaagcga
     1081 agtctctgat tcggggactg taagtccgtt gcagcactcg acgcggcagc gcaaagcgct
     1141 gaccatcact cgctgaggtt ttgcccgacc cccaggttag cgaggtttcc agtccggaga
     1201 tagctgacac caactcggtc agtgccatgc gttgggcttc ctcggtcatt tgccaatcac
     1261 tcacccgctt caactccttg tagccgatgc cacggaccag ctgtaccatc gtgtacaggc
     1321 cgatgttgca gccgtgggcc atcatcgcgg ccaataccgt gcagatatct tctaccgtgg
     1381 ggttttgccg ctgtgccggg gtcatgaaat gacgggtaaa accaagcgta ttatccacct
     1441 cgatcagcag ttccggcagc ttgatccagc gcatgtgttg ggcgaaccag tccttgagtt
     1501 cgtccagttg acattcactc agtgggtcga gcttttcgct cggatcggtg gcgagatgcc
     1561 agccgcgctc gtcggcggtg gcgtagcggt taccggaagc cgtttcgaga aagcgatcaa
     1621 aggcgtcgtt gagtcgtcgg cggaggtaat cagggacttg atcagcctct tgtggcaacc
     1681 cagcacgctg gaagaacccc gcgcgcaggc atgcccactg ctcgtcctgg atgaagaaat
     1741 tatcgaaccg gccgaagcgc ttgctgtggg ccaccgagag attgccggcg cggatttcct
     1801 cctggagctg ggtaagcagc gcgcactccc aggccgattt ttgaagcttc ccgtccttat
     1861 cccggataaa acgctgcagc cgtttcggca cgaactcggt gggtgcctcc gcaggcagcg
     1921 tgcgtttgtg ggcgtcattc agtgccttga tcaccaccag cgcctccagg cacgggttgg
     1981 ggccttccgc ctccggcttg aagtcaagcg cgcgcaggaa tgccggggca aactggcgca
     2041 gataactgaa ccggctgatg acgccgtgaa atgcgtcgct ttttttaccg gtaatccact
     2101 cgtcgagcgc ctccatctgg gtagccaatt cgtcgcgcgg gatctggtcg aacagccgta
     2161 ttcgcagatc gatgtcgggc acggtatcgt ccaggacgat ggttcccagt gatttgaatg
     2221 aagccagcga gctttggagg gtcttgcgct gctggcgcaa ctgttcgttg aggtccgctt
     2281 cggcctgagt atggacccag gtgatgagct tgtcatacat atccacggcc tggtcgaccg
     2341 catcgcggta actttgccag agaaagcaca ccagggcggc attgcgccgc ggctgaacga
     2401 cctcccgtaa tcggtcggcg gagcacttat tcacgtagtg aaacagcgcc cgctggtagt
     2461 tgctgttgag ccatgacaga tcgagctgta gtacgcctgt tgcctcaata agctcaatct
     2521 tctggagcaa cacccgcatc gcgtcgggcg aaggactgtg cgggttggct ttgagccgct
     2581 gcaacggaga ggctttcttg ccgaggggga cctgcagcag ttcttccagc accccggcca
     2641 tcccacttgg taaggcggta gtaagtcgct cgtagatcgc ctcgcgcgct cgctggcgct
     2701 gttcgccaat gaggcg
//
LOCUS       DASQSL010001410         3553 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_132898, whole genome shotgun sequence.
ACCESSION   DASQSL010001410 DASQSL010000000
VERSION     DASQSL010001410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3553
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132898"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..260)
                     /locus_tag="VE844_14470"
     CDS             complement(<1..260)
                     /locus_tag="VE844_14470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014028826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family protein"
                     /protein_id="HZC02507.1"
                     /translation="MPSNPAFDRTPLPRLVLASSSPYRKLLLERLRLPFVTVAPAIDE
                     TPKPDESPLNLVRRLAETKARALQPIYPEALIIGSDQVAVCGG"
     gene            338..529
                     /gene="rpmF"
                     /locus_tag="VE844_14475"
     CDS             338..529
                     /gene="rpmF"
                     /locus_tag="VE844_14475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008932652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HZC02508.1"
                     /translation="MAVQQNRKTSSKRGMRRSHDALTAPTLSLEPTTGEVHRRHHISP
                     DGYYRGRQVLKVKSKVKPD"
     gene            599..1621
                     /gene="plsX"
                     /locus_tag="VE844_14480"
     CDS             599..1621
                     /gene="plsX"
                     /locus_tag="VE844_14480"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007145144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HZC02509.1"
                     /translation="MNVCVALDAMGGDHGPFIVVPAALKVLRAHPELHLILVGDEGVL
                     TAVLKRYPVLSGKQLSLRHASQRVEMDDLPSQALRGKKDSSMRVAIELVKEGAAHACV
                     SAGNTGALVATARFVLHMLPGIDRPAICSAMPTIHGHSHLLDLGANVDSSPEQLFQFG
                     LMGVALTSAVENKANPTVALLNIGEEEIKGNNRVKQAAALMAESGLNYLGFVEGNDIY
                     EGRVDVIVCDGFVGNVALKASEGVAHMLAHFAKEEFTRTPLTRLAAWFSRPVLKALKH
                     RADPRRYNGASLLGLRGIVVKSHGSADELSFANAIREAMLEVQKAVLERIGKQLELIS
                     EQRRAV"
     gene            1618..2580
                     /locus_tag="VE844_14485"
     CDS             1618..2580
                     /locus_tag="VE844_14485"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012638471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HZC02510.1"
                     /translation="MRYSRITGTGGYLPERVLTNADLERMVDTTDGWIVSRTGIRKRH
                     IARDDETTCDLAEQAAHRAIEAAGIRANDIDLIVLGTTTPDIVFPSTACLLQQRLDIH
                     GCAAFDVQAVCTGFIYALAIADKFIRTEAAQCALAIGAETYSRIVDWTDRTTCVLFGD
                     GAGAVVLQSSHEPGILSSHLHADGQYQELLKVPGGLSYGPHQGSNAYVKMQGNEVFKI
                     AVNILGRIVDETLAANNLTKRDMDWLVPHQANIRIIAATAKKLDMPMSRVVVTIGEHG
                     NTSAASVPLALDQAIRDGRIKRGEILLLEALGAGFTWGSVLVKY"
     gene            2620..3552
                     /gene="fabD"
                     /locus_tag="VE844_14490"
     CDS             2620..3552
                     /gene="fabD"
                     /locus_tag="VE844_14490"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013034018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HZC02511.1"
                     /translation="MAVGFIFPGQGSQSLGMLKDLAQIYASIVGTFSEASQELGYDLW
                     DLVQNGPEDQLNATERTQPAMLAAGVALWRVWQEQGGVQPLLMAGHSLGEYSALVCAG
                     AVGFREAVSVVADRGRYMQEAVARGGGGMAAILGLTDHQVAEVCQSMAQGEVVACANF
                     NSPGQVVIAGQIGAIERAVEYARTMGAKRAVILPVSVPSHCELMRPAAQWLFARLQSV
                     PIARPAISVIHNVDTSIRPDPKSIVQALVEQLYKPVRWVEVIQKMVAEDIHTVVECGP
                     GKVLTGLCKRIDSNLHCLAVLDSPSLDAALRVVN"
BASE COUNT          800 a          888 c         1064 g          801 t
ORIGIN      
        1 ccgccacaca cggctacttg atcagagccg atgatgagtg cctctggata gatgggctgt
       61 agagccctag cctttgtttc ggcaagtcgt cgcacgagat ttaaaggaga ttcgtccggc
      121 tttggggtct cgtcgatcgc gggagccaca gtaacgaacg gcagccgtaa acgttccagt
      181 aataatttgc gataagggga agacgaagcc aggactaagc gggggagggg agtacgatca
      241 aaggcaggat tggacggcat aactaagtta atttatcatt ttactttatc attttactgt
      301 agtatcaaga gtggaggaat caattaggag ttagactatg gctgtacagc aaaatcgcaa
      361 gacctcttcc aagcgtggga tgcgccgttc acatgacgcc ttgacggcgc cgaccttatc
      421 tcttgaaccc actacaggcg aggttcatcg ccgtcatcac atcagcccgg atggctacta
      481 taggggccgg caggtgctta aggtgaaatc taaagtgaaa ccggattaag ataaatttaa
      541 caatataatt gctctgagaa ccccaaaaca ctcctaagat ccttatgagg gcttttcttt
      601 gaacgtctgt gtcgcgctgg atgctatggg aggggatcat ggcccattta tcgtagtccc
      661 ggccgcactc aaagtattaa gagctcaccc tgagttacat cttatcctgg tgggggatga
      721 aggcgttctg accgcggtgt taaagcgcta tccggttcta tccggtaagc aattgagcct
      781 ccgccatgca agtcagcggg tagagatgga tgatctccct tcccaagcct tacgcggcaa
      841 aaaggattca tctatgcggg tggccatcga attggtaaaa gaaggcgcgg cgcatgcctg
      901 tgtcagcgca ggcaataccg gtgcattggt ggccacggcc cggtttgttc ttcacatgct
      961 acccgggatc gatcggcccg cgatctgctc ggcgatgcct acaatacacg gccattccca
     1021 tctcttggac ttgggtgcga atgtcgattc gagccctgag caattgtttc aatttgggct
     1081 tatgggagtg gccttgacca gcgcggtcga gaataaggca aacccgaccg tagcgcttct
     1141 taatatcggt gaggaggaga tcaaaggcaa caaccgtgtt aaacaggcag cggccctaat
     1201 ggcagagagt ggtttaaatt acctgggctt tgtcgagggc aacgacatct atgaaggcag
     1261 ggtcgatgtg attgtatgcg atggctttgt cggcaacgtg gcgctcaaag ccagcgaggg
     1321 ggtggcccat atgctcgcgc actttgccaa agaggagttt actcggacgc cgctcactcg
     1381 cttagccgct tggttttcaa gaccggtatt aaaagcgctc aaacaccggg ccgatcccag
     1441 gcgttataat ggcgcaagcc tgctcggcct tcggggcatc gtggttaaaa gtcacggcag
     1501 cgccgatgaa ctttcttttg ccaacgctat ccgcgaggcg atgttagagg tacaaaaggc
     1561 tgtgctcgag cggatcggca agcagcttga gcttatctct gaacaaaggc gggccgtttg
     1621 agatattcac ggatcaccgg caccggcggc tatctcccag aacgtgttct gacgaatgct
     1681 gatctcgagc ggatggtaga cactaccgat gggtggatcg tcagccgcac cggcatccgt
     1741 aaacggcata tcgccagaga cgacgagacc acctgtgatc tggccgagca agcggctcat
     1801 cgggcaatag aagcagcggg tatccgggca aatgatattg acctgattgt gctcggcact
     1861 accactccgg atatcgtgtt tcccagcacg gcctgtcttc tacaacagcg tttagatatt
     1921 catggctgtg ccgccttcga tgtgcaagcg gtgtgtaccg gattcattta cgccttggct
     1981 atcgccgaca aattcatccg tacagaagcg gcgcagtgtg cactggcgat cggtgccgag
     2041 acctactcgc ggatcgtgga ttggaccgat cgcacgacct gtgtgctgtt tggcgatggg
     2101 gctggggcgg tggtcctgca aagcagccat gaacccggga tcctgagctc acacctgcat
     2161 gcggatggtc agtatcagga actgctaaag gtgcctggtg gcctctcgta tgggcctcat
     2221 caaggcagca atgcctatgt caagatgcag ggcaatgagg tcttcaagat agcggtcaat
     2281 atcttaggcc gtattgtcga tgagacctta gccgccaata atctaactaa gcgcgatatg
     2341 gattggctgg tgccccatca ggccaatatc cgcatcatcg ccgccaccgc caaaaagctt
     2401 gatatgccca tgagccgggt ggttgtgacc atcggtgaac atggcaatac ttcggcggcc
     2461 tccgtgccct tggcattgga tcaggccatc cgggatggtc ggatcaaacg gggtgagatc
     2521 cttctgctcg aggctttggg agccggtttt acctggggat cggtgttggt aaaatactag
     2581 ttatatgaaa aaattaaagt ggggatggaa gaggagtaaa tggcggtagg gtttatattc
     2641 ccaggccagg gttcgcagtc gcttgggatg ctcaaggact tggcacagat ctacgcgagc
     2701 atagtaggca ccttttctga ggcgtctcag gaactgggct atgatctctg ggatctggtc
     2761 caaaatggac ccgaagacca attgaacgcg accgaacgga cccagccggc gatgctggca
     2821 gcaggggtcg ctctgtggcg ggtgtggcag gagcagggtg gggtccaacc gctgctcatg
     2881 gccggccata gtctcggtga atacagtgcc ttggtgtgcg ccggagccgt cggttttcgc
     2941 gaggccgtct ccgtggtggc ggatcggggg cggtatatgc aagaggcggt agccagaggc
     3001 ggggggggca tggcggctat acttgggctg accgaccacc aggtggccga ggtatgccaa
     3061 tcgatggccc aaggtgaagt ggtggcttgc gccaatttta actcgcccgg gcaagtggtg
     3121 atcgccggcc agataggggc tatcgagcgc gccgtggaat atgccagaac tatgggcgca
     3181 aaacgcgctg taatcttgcc cgtgagcgta ccttcccatt gcgaattaat gcggcctgcc
     3241 gctcaatggc tttttgcacg gctgcagagt gttcctatcg cccgtcctgc tatttccgtc
     3301 attcacaatg tagatacctc gatccgcccc gatcccaaaa gcattgtcca agccctggtt
     3361 gagcagcttt ataagccggt acgctgggtt gaggtgatac aaaaaatggt ggcagaggac
     3421 attcacacgg tcgtggaatg cgggcctggc aaggtgctca cgggtctttg caagcggatc
     3481 gatagcaatc tgcactgcct ggccgtgttg gatagcccaa gcctcgacgc cgcgctccga
     3541 gtggttaatt gat
//
LOCUS       DASQSL010001411         2867 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_197835, whole genome shotgun sequence.
ACCESSION   DASQSL010001411 DASQSL010000000
VERSION     DASQSL010001411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2867)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2867)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2867
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197835"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(68..496)
                     /locus_tag="VE844_14495"
     CDS             complement(68..496)
                     /locus_tag="VE844_14495"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HZC02512.1"
                     /translation="MAMTIHVDIVSAESEIYSGQAEMVIAPAVMGEVGIAPGHTPFLT
                     RLKPGEIRLKLFGGGEEAFYVSGGILEVQPRMVTVLSDTALRAHDLDEAAVLEAKQRA
                     EYALKDRGAQIDYARAMAEYAEAAAQLQAIQRLRKRAGHG"
     gene            complement(515..1894)
                     /gene="atpD"
                     /locus_tag="VE844_14500"
     CDS             complement(515..1894)
                     /gene="atpD"
                     /locus_tag="VE844_14500"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011978979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HZC02513.1"
                     /translation="MRSSGKVVQIISAVIDAQFPVDGVPKIYDALVIEEGGLTLEVQQ
                     QLGDGVVRTIAMGSTDGLQRGIKVHNTGAPISVPVGPKTLGRIMNVLGEPIDEKGEVG
                     AEQRWSIHREAPKFTDLAPTTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM
                     ELIRNIAIEHSGYSVFAGVGERTREGNDFYREMTESKVLDKVALVYGQMNEPPGNRLR
                     VGLTGLTLAEYFRDEGRDVLLFIDNIYRFTLAGVECSALLGRMPSAVGYQPTLAEEMG
                     RLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAV
                     DPLDSTSRQLDPLVVGQEHYETARAVQKTLQRYKELRDIIAILGMDELSEEDKLTVAR
                     ARKIQRFLSQPFFVAEVFTGSSGKYVPLKETIKSFKGIVEGEYDHLPEQAFYMVGMID
                     EAVDKAKRL"
     gene            complement(1947..2804)
                     /gene="atpG"
                     /locus_tag="VE844_14505"
     CDS             complement(1947..2804)
                     /gene="atpG"
                     /locus_tag="VE844_14505"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018233140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HZC02514.1"
                     /translation="MAATKEIRTKIKSIQSTQKITRAMEMVAASKMRKAQGRMRATRP
                     YAEKIRKVVAHLAHAHAEYQHPYTIRRELRRIGFILVSTDRGLCGGLNANLFRAAIQM
                     IKGWDTQGVDIDICTIGAKAAGFFSRVGGNIVAQAVHLGDQPRLEKLIGTVKVMLDAY
                     EAGRIDQLFLAYNRFINSMTQRPQIEQLLPLQLGEDVEIKPWDYLYEPEAQEVLDHLL
                     QRYIESLVYQGVVENIACEQAARMVAMKSASDNAGKLIDELRLVYNKARQAAITRELA
                     EIVGGAAAV"
BASE COUNT          586 a          934 c          734 g          613 t
ORIGIN      
        1 tcggtgctgt ccgagtgttg aaagaaaagt gaaagaaaag ggctctgacc ccttttcccc
       61 ttttccgcta accatgtccc gctctcttcc gcagccgttg gatcgcctgc aattgggcgg
      121 cggcttcggc atactccgcc atcgcccggg cataatcgat ctgggcgccc cgatccttca
      181 aggcgtattc ggcacgctgc ttcgcttcaa gtacggccgc ttcatccaga tcatgggcgc
      241 gcaaggcggt atccgataaa accgtcacca tccgcggctg cacctccagg atcccaccgg
      301 agacatagaa ggcctcctct ccgccaccaa agagctttag tcggatctcg ccgggcttga
      361 gacgggtcaa aaacggcgta tgcccgggcg ctataccgac ctcgcccatg accgctggcg
      421 caatcaccat ctccgcttgg ccggagtaga tctcgctctc tgcactgaca atatcgacgt
      481 ggatcgtcat cgccatcggg ccgttttctg ccgcttagag gcgtttcgcc ttgtccacgg
      541 cctcatcaat catccccacc atatagaatg cctgctcagg caggtgatca tactcgcctt
      601 cgacgatgcc tttgaagctc ttgatagtct ctttaagcgg cacatacttg cctgagctcc
      661 cggtaaacac ctcggccaca aagaagggct gcgacagaaa acgctggatc ttgcgggcgc
      721 gggccacggt cagtttatcc tcttcagaga gctcatccat cccgaggatc gcgatgatat
      781 cgcgcaactc cttgtagcgc tgcaaggtct tctgcaccgc gcgcgccgtc tcgtagtgct
      841 cctgaccgac gacgagcggg tcaagctgac ggctggtaga atcgagcgga tcgaccgccg
      901 gatagatacc gagctctgcg atctggcggg agagcaccac ggtcgcatcg agatgcgcga
      961 aggtcgtggc cggggaggga tcggtgagat catcggcggg cacatacaca gcctggatcg
     1021 aggtgatgga tccagtcttg gtcgaggtga tgcgctcttg gagcctgccc atctcttcgg
     1081 ccaaggtcgg ctgatacccc accgccgaag gcatgcgccc aagcagcgcc gaacactcga
     1141 ccccggccag ggtaaagcgg tagatgttat cgataaagag cagcacatcg cgcccttcat
     1201 cacggaagta ttcggccagc gtcaagcccg tcaatcccac ccgcaagcgg ttaccgggcg
     1261 gctcgttcat ctggccatag accagcgcga ccttatcaag caccttcgat tcggtcatct
     1321 cacgataaaa gtcattcccc tcgcgcgtgc gttccccgac cccggcgaag accgaatagc
     1381 cgctatgctc aatcgcgatg ttacggatca actccatcat attgaccgtc ttacccaccc
     1441 cggcaccgcc aaagagaccc accttgccgc ccttggcgaa gggacagatg agatcaatca
     1501 ccttgatgcc cgtctccagg agctccgtgg tcggcgcgag atcagtaaac ttcggcgcct
     1561 cacgatggat cgaccatcgc tgctccgctc ccacctcacc cttctcatca atgggctcac
     1621 cgagcacgtt catgatgcgt cccagggtct tgggcccgac cggtaccgag ataggcgcac
     1681 cggtattatg cactttgatc ccgcgctgca aaccatcggt ggatcccatg gcaatcgtac
     1741 ggactacccc atcgcccaac tgttgttgaa cctcgagcgt caacccgcct tcctcgatca
     1801 ccagggcatc gtagatcttg ggaaccccat cgacaggaaa ctgcgcatcg ataacggcgc
     1861 tgatgatctg aaccaccttt cccgaacttc tcatcgttat tgatcccctt acacgcgtgt
     1921 ttaagacctt atccggttac agcggatcaa accgccgcgg ctcctcccac gatctcggcc
     1981 aactcacgcg tgatcgctgc ctgccgcgcc ttgttataaa ccagccgcaa ctcatcaatc
     2041 agcttgccgg cattatcgga ggcacttttc atcgctacca tccgcgccgc ctgctcgcag
     2101 gcgatattct ccaccacccc ctgatagacc agggactcga tgtaacgctg cagcagatga
     2161 tccaatacct cctgggcctc gggctcatac agataatccc aaggtttgat ctcgacatcc
     2221 tccccgagtt ggagcggtaa caattgttca atctggggcc tctgggtcat cgaattgatg
     2281 aagcggttgt aagccagaaa cagttgatcg atccgtcccg cctcataggc atcgagcatc
     2341 accttgaccg tgccgatgag cttttcgagg cgcggctgat cccccaaatg cacggcctga
     2401 gccacgatat tcccccccac tcgactgaag aaacccgcgg ccttggcccc tatggtgcag
     2461 atatcgatat cgacaccttg ggtatcccac cctttgatca tctggatcgc ggctcggaac
     2521 agattggcat tgagtccccc acataaaccc cgatcagttg aaaccaggat aaatccgatc
     2581 cggcgcagct cgcgcctgat cgtatagggg tgctgatact cggcatgggc atgggcgaga
     2641 tgcgcaacca ccttacggat cttctccgca taaggacgcg tcgcccgcat gcgtccttgc
     2701 gccttgcgca tcttgctggc cgccaccatc tccatggccc gcgtgatctt ctgggtgctt
     2761 tgaatgcttt ttatcttggt gcggatctct ttagtggcgg ccatcggtca gtccccttct
     2821 cggcttacca ggcatgattg agcttgaact cctctaccgc cgccttg
//
LOCUS       DASQSL010001412         1832 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_132924, whole genome shotgun sequence.
ACCESSION   DASQSL010001412 DASQSL010000000
VERSION     DASQSL010001412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1832
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132924"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1175
                     /locus_tag="VE844_14510"
     CDS             <1..1175
                     /locus_tag="VE844_14510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02515.1"
                     /translation="RTLSSFVRVEKDLDDQTQYCLTIRLTIVRVLPALLLMLGFLSLG
                     SLLLAAPVSAEQRDYSPNLFTGIAVGSFGQPTVDQPETDDNPTATEDKPAIAYPVGVF
                     ITSLHDLDPIGGSFGVDYWVWSVHPSELDPLESQELYNAKEAKADLDLKEGRGGQEWS
                     QRKISAVVLHDWDMSNFPFDRQVLNIVLEEGAADTNALVYTADTANSGYNEDIRLDGW
                     RITNFTIEERTVHYATTFGDPGISSGSSYARLVASVQIEREDVAGFFKLVAGVYAASA
                     ICLLSFLMVPDIPPIFGARMVVLVGSLFATVISLRASEAVLGGSTASLSLVDKIHIVA
                     MVFIFIAALIAVFARKTCESGKEELAKRRDRVWLPVLGISFVLANGLLIGMAAITG"
BASE COUNT          368 a          525 c          544 g          395 t
ORIGIN      
        1 gcaggactct ttcatcattt gtcagggtgg agaaagatct ggatgatcaa acccagtatt
       61 gcctcaccat caggctgacc attgtgcgcg tcctacccgc tcttcttttg atgctcggat
      121 ttctgagcct cggctcgctg ctgctggcgg ccccggtctc tgccgagcag agggactact
      181 cccccaacct cttcaccggt atcgcggtgg ggagtttcgg ccagcccaca gtcgatcaac
      241 cggagacgga tgacaacccc accgccacgg aagacaagcc agctatagct tacccggtag
      301 gggtcttcat cacctcactg cacgacctcg accctatagg tggctcgttc ggggtcgact
      361 attgggtttg gagcgttcat ccatccgaac tcgatccact ggagagtcag gaactctaca
      421 atgccaaaga ggccaaagcc gacctcgacc tgaaggaagg gcgaggcggc caggagtggt
      481 cgcagcgcaa gatcagcgcg gtcgtgcttc acgattggga catgagcaac tttcccttcg
      541 accgccaggt actcaacatc gtgctggaag aaggggctgc cgacaccaat gcgctggtgt
      601 ataccgctga caccgccaac tcaggctaca acgaggacat taggctagat gggtggcgca
      661 ttacgaactt cacgatcgag gagcgcaccg tccactacgc gaccacgttc ggcgaccctg
      721 gcatctccag cggaagtagc tacgcccgcc tcgtcgcttc ggttcagatt gagcgggagg
      781 acgtagccgg attcttcaag ctggtcgcgg gggtctacgc cgctagtgcg atctgtcttc
      841 tctcgttcct gatggtgccc gatatcccgc cgatcttcgg cgcgcgcatg gtcgtgctgg
      901 tcggctccct gtttgcgacg gtcataagtt tgcgggcgag cgaagcggtg cttgggggca
      961 gcaccgcgag tctgtcgcta gtggacaaaa tccacatcgt agcgatggtc ttcattttca
     1021 tcgctgcctt gatagcggtc ttcgcgcgaa agacctgcga gtccgggaag gaggagctcg
     1081 ctaagcggcg cgaccgggtc tggctcccgg tgctcggcat ttcctttgtg ctcgccaacg
     1141 ggctgttgat cggcatggcg gcgatcacgg gttgagacgc ggttttctcc gcccgccggt
     1201 tttcacaggt cagtggtgcg aagaacggtt gccggtcctc cgtttcgctc ctaatttttg
     1261 agcttgtgct gtcaaaggtc gaggggtaca gagaccgata gcttcaccgg ctgagctcac
     1321 gttgtcggga gtaaaaggtc ttatgctggc cacattgccc tgtacctgaa aaccttctgt
     1381 ctaacgactc aatctcgttc gcccgagccg tacataagaa ccctgtaata cttcaggcaa
     1441 gtattatggc tctcctggtg taggcaagcc tataggaccg gcccgcacct tcattgcaca
     1501 aggaaattct cgggaagtct cacggtagca agatgcaacg ggcttgcaac agatcctcgc
     1561 aacagatgtg tgtagcgacc ccccgcaacg gttgcggggg gtctgcaagt gatctagatg
     1621 tagagcccgc aaccgttgcg ggctctagct tgctacggcg aacttccgag aatgaaagta
     1681 gaggccggta catgctggac tggcccctgg cacttggggt accgacgcga gtaaggtggt
     1741 cttggcggcc acgagtccta tcttgcgaag tagaggctgg caggtacaga aaccccacga
     1801 agatggccca tacctgtgtg ggcgacgaat gc
//
LOCUS       DASQSL010001413         1164 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_90591, whole genome shotgun sequence.
ACCESSION   DASQSL010001413 DASQSL010000000
VERSION     DASQSL010001413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1164
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90591"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..182)
                     /locus_tag="VE844_14515"
     CDS             complement(<1..182)
                     /locus_tag="VE844_14515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02516.1"
                     /translation="MAMSSTPSQQKCAVWPMHEDMMQRIIAQRVDETSSLKYADVVSG
                     IGARSRSLFRENDTRC"
     gene            400..>1164
                     /locus_tag="VE844_14520"
     CDS             400..>1164
                     /locus_tag="VE844_14520"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HZC02517.1"
                     /translation="MRMVPQTILKGCVLAIVVALFLPFSSCTAMREPERPNILFVVTD
                     DMPENLLYRMPEVDKRIVSEGIHFQNAYVSQSLCCPSRATILTGMYPHDTGVLSNGGP
                     HGDVEAFRKQGLEQRSVANWLTGNGYRTGLVGKYMNGYDGSYVPSGWSYWYGRYEGGF
                     ANENGQIMSTSGQFEVDAVKSKALAFLDRATDQAGDPPFALFVWTLAPHLPAARHAPR
                     HANLYKEEGFNPSPSFNEADVSDKPTWVRDLPPISDE"
BASE COUNT          265 a          339 c          327 g          233 t
ORIGIN      
        1 aaacatctcg tgtcgttctc cctaaatagg ctgcgggatc tcgcgccgat cccagacacc
       61 acatcagcgt acttcagaga cgatgtctcg tcgacacgct gagcaatgat ccgctgcatc
      121 atatcttcgt gcatcggcca gacggcacat ttttgctgcg agggcgtgct agacatcgcc
      181 accaccgctc gccctcggac actctaaata aaagtcgcac gacagttcgt agaacggtta
      241 accgacacgc tctgctacgc agcgtgaatg gctaaagtcc agcaacgaat gcccccgagt
      301 catcgtagaa tcaacgctct ttgcttacat gcctggaagg gagaatgccg catgggcgaa
      361 acgccgagcg ggaaggagag tgtaaggtag gatgatgaca tgaggatggt gccacagacg
      421 atattgaaag ggtgtgtcct ggccattgtc gtggctctct ttcttccttt cagctcctgt
      481 acggcgatgc gcgaacctga gaggcccaac atactattcg tcgtgaccga cgacatgccc
      541 gagaatcttc tctaccgaat gccggaggtc gataagcgca tcgtatccga gggcattcac
      601 ttccaaaacg cctacgtgag tcagtcgctg tgctgcccat ctcgggcgac tatactcacc
      661 gggatgtacc cgcacgacac cggtgtcctg tcaaacgggg gcccccacgg tgacgtcgaa
      721 gctttccgca agcagggcct cgagcagcgc agtgtggcga attggcttac agggaacgga
      781 tataggacag gcttggtggg caagtacatg aacggatacg acggttccta cgtgccgtcc
      841 ggctggtcct actggtatgg gcgctacgag ggcgggttcg caaacgagaa cggacagatc
      901 atgagcacgt cgggtcagtt tgaagtcgat gcggtaaagt ccaaggcgct cgccttcctc
      961 gaccgagcga ccgaccaagc gggcgaccca ccgttcgcac tctttgtatg gaccctggcg
     1021 ccgcacttgc cagctgcccg tcatgctcct cggcatgcta acctatacaa agaggagggt
     1081 ttcaacccct cgccgagctt caacgaagct gacgtgtcgg acaagccaac gtgggtaagg
     1141 gacttacccc ccatctccga tgaa
//
LOCUS       DASQSL010001414         1107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_147294, whole genome shotgun sequence.
ACCESSION   DASQSL010001414 DASQSL010000000
VERSION     DASQSL010001414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147294"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(145..1073)
                     /locus_tag="VE844_14525"
                     /pseudo
     CDS             complement(145..1073)
                     /locus_tag="VE844_14525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020503376.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT          231 a          318 c          303 g          255 t
ORIGIN      
        1 gagatcatcc tacttcatca aggcatcgga accgagttgc tgctcctatc aaccctggct
       61 caagcgccaa ccatcaggca tgcaagggtt gaggtcagcg agtcgcgcca gataaaaatt
      121 tggctcaata tggattccgg ggagctacgt gagcaagcgc tccagtagcg agcctaacaa
      181 ggctttccct cgccttctgg cgttatggat gaactcaaaa aagcccaggt acagcggcaa
      241 atgcgcctgt gagatacccc gatgtggacg caaccatgat ctcagcaacg accagaagcc
      301 ctccatggtg ttgacatgga cttcacaaaa gccgtcaccg tcgtcatcac gggcgtattc
      361 tcccgtactg tggcacacgc tttcgtgatc gtagccccat tcctccaggc ggctgtagat
      421 gtcatactca tcggtgtaga ccacagtgcc cagggcaatg gtggcttgaa tcagcggctt
      481 gatcgtcacc tgttggacgt tttccaacat ccgaatgaca acggctccgc cgcgttcgat
      541 catgccgaag atcggcggtt tttcgctttc aagcgtgcca cgtccccgtg cgcctttgag
      601 tcgccgtcgt cgtccagggc gccctttttt gcgacttcgt ccggttgccc tttgtgcccg
      661 gccacgatgt agacctcatc acattcgact tcaccgctga aggtggatga ggggttcttg
      721 gacacgctgc cgtggcgtac ctgagtcgtc atgtgatgtg catcgtcttt attgaggtca
      781 agctcttggg ccatttgggc attggacagg ttgagaccca tgaggtacga acacagaatc
      841 cagatgcgca gcggctgatg atgaccggca aaaatggtgt cggtcaaatc gtcaaagcgt
      901 cgctcacagg acttacactg gtagcgttgc cgctcgggct gagtctcatc gcgcccctgt
      961 ttggtgatct ccggactgtc gccatcgggg cacctgacgc catcggggca gcgcatatcg
     1021 cggacggtgg cgaaacattt ggcgtcgtcc attagagatt gcaggttaat catcgcgcca
     1081 gtatcgccca ttggctcaac ccactca
//
LOCUS       DASQSL010001415         2055 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_188989, whole genome shotgun sequence.
ACCESSION   DASQSL010001415 DASQSL010000000
VERSION     DASQSL010001415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2055
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188989"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(123..1814)
                     /locus_tag="VE844_14530"
     CDS             complement(123..1814)
                     /locus_tag="VE844_14530"
                     /inference="COORDINATES: protein motif:HMM:NF040081.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6399 domain-containing protein"
                     /protein_id="HZC02518.1"
                     /translation="MGTVVQDMPQINPASQPRWDRFERADLFEQYRQLRTQGLSERQI
                     AKELNVPRTTLQAWRLWHDSLDICPHVADFFQSGPGLAFLHRLVIAFHLVCVEIGACG
                     IRLVCLFLQMTGLDRFVAASYGAQQRVNVQIEQAIVDYDESETPRLAKDMPQKDLSVT
                     QDETFTGGLCLITMEPESNFIILEQLADARDQVSWNDAMAPALAKFNCRVIQSTSDEA
                     SGLLAYVAHYLQAHHSPDLFHVQHELVKAVSGPMATKERAAHKALTEAQEQLQRVQSD
                     PQSADDEPEKRGPGRPPKAPVSREQAEQAREVATQEHQRLAAQREQVKASIKGIGHDY
                     HLVDLERGVRRNGQLIAADIQGHIKQIRTVAQQEKLSQSCLERIEKAERVVPKMQATI
                     EFVSGYVGQQVAQLDLEPPISFAMHAKLIPSYYLDRVAQTRSLEGGAALCDLAEQLRA
                     PLFEAGGVLWELSPETQAQLRHEAKRLAAVFQRSSSNVEGRNGYLSLRSHQLRGLNLP
                     RKRQCFTAIHNFFLTRSDGATAAERFFGQKPRSMFAAILESVELAPAPLRPPRKA"
BASE COUNT          398 a          545 c          638 g          474 t
ORIGIN      
        1 attacattgc caaagaatga gcgcctaccc ctgtagcgca gtggcgcctg cttgaggacg
       61 ctatacaagg acctgcagta gcaaatagac aggaattggc ctcgatccag ggatcggcca
      121 ctctatgctt ttcgaggcgg acgcaggggc gcgggggcca gttccactga ttccaagatc
      181 gccgcaaaca tcgagcgcgg tttctgacca aaaaagcgct ctgctgccgt ggccccgtca
      241 gatcgggtga ggaagaagtt gtgaatggcg gtgaagcact gtcgtttacg tggcaggttg
      301 agacctcgaa gttgatggct gcgcagtgac aagtagccgt ttcgcccctc cacattcgaa
      361 cttgagcgct ggaatacagc ggccaacctc ttggcctcat gccgcagctg cgcttgggtc
      421 tcggggctca actcccacaa gacaccgccc gcttcaaaca atggggcgcg aagctgctcg
      481 gcgaggtcgc aaagggctgc accaccttca agcgagcgcg tttgggccac gcgatcgaga
      541 taataggagg gaatcagttt ggcatgcatg gcgaaagaga tcggcggctc taaatcgagc
      601 tgagcgacct gctgccccac atatccagag acgaactcga tggtggcttg cattttgggc
      661 actacccgct cggctttctc gatgcgctcc aagcagctct gactgagctt ttcttgctgg
      721 gccactgtgc gaatctgctt gatgtggcct tggatatcgg cggcgatgag ttggccgttt
      781 cggcgcaccc cgcgctcgag atcaaccaaa tggtagtcgt ggccaatgcc cttgatactc
      841 gccttgacct gttcacgttg tgccgcgaga cgttggtgct cctgagtggc cacttcgcgg
      901 gcttgttcgg cttgctcccg gctcacgggg gcctttgggg gacggcctgg gccgcgcttt
      961 tcaggctcgt catctgcgct ttgcgggtcg ctttgcaccc gttggagttg ctcttgggct
     1021 tcggtgaggg ccttgtgggc ggctcgttct ttggtggcca taggccccga gacggctttg
     1081 accagctcgt gctgcacatg gaacaagtcg ggtgaatgat gggcttggag ataatgcgcg
     1141 acataggcca acagcccgga ggcttcatca ctggtcgatt ggatgacgcg gcaattgaac
     1201 ttggctagag ccggtgccat ggcgtcgttc cagctgactt gatcgcgggc atcagcgagt
     1261 tgttccagga taataaagtt gctctcgggc tccatggtga tgaggcaaag gccaccggtg
     1321 aaggtttcgt cctgggtgac gctgaggtct ttttggggca tgtccttggc caagcgtggg
     1381 gtctcacttt cgtcatagtc gacgatggct tgttcaattt ggacattgac gcgctgctga
     1441 gcgccatagg aggcggcaac gaagcggtcg aggcctgtca tctgtagaaa gagacaaacc
     1501 aaacggatgc cacaggctcc aatttcaacg cagaccagat gaaaagcaat gacgagtcgg
     1561 tgtaagaacg ccagtccggg gccgctctga aagaagtcag cgacgtgggg acagatatcg
     1621 aggctgtcgt gccacagccg ccaggcttgc agggtggttc gaggcacgtt gagttctttg
     1681 gcgatttgac gctccgagag cccctgggtt cgcaactgcc ggtactgctc aaagaggtcg
     1741 gcgcgttcga aacgatccca gcgtggctgg ctagctgggt tgatttgtgg catgtcttgg
     1801 actacggttc ccactgcgac ctcctttgtc aatcccttgc ctgttggtga tggctaagga
     1861 tggcgaggtc gcccactcat ttcaactttt gcggtgggga tgttgctcat ttttctgagg
     1921 gctcaaggtg cctaagtggc cgatccctgg atcgaggccc cttatggctt cgatcaccgg
     1981 atcggccact ttatatgctc gtcacctcag taattggtga gcggccgcag gataatctat
     2041 ttaagatcaa tatct
//
LOCUS       DASQSL010001416         1580 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_115707, whole genome shotgun sequence.
ACCESSION   DASQSL010001416 DASQSL010000000
VERSION     DASQSL010001416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1580
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115707"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..850)
                     /locus_tag="VE844_14535"
     CDS             complement(<1..850)
                     /locus_tag="VE844_14535"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HZC02519.1"
                     /translation="MNLFALNTRNRRRRALSALYALPLLISSAASSEEQENPVTELEL
                     PEVEVIGTTPLPALGTPLEKVPANVRSLTAEEFEDQNPIDLSEMLFRNVPSIHLNAAQ
                     NNPFQNDITSRGFLASPLLGSAIGLSVYLDGARFNEGFGDTVNWDLIPQSAISSIDLI
                     PGSNPLFGLNTLGGALAVRTKSGFAFQGTEVEASGGSFGRWAVEAEHGGYRDKVDWYL
                     TFNALDEEGWRVESPSRIRQLFGKLGWENDTTDLDLSYIFADNELTGNGVAPESLLAR
                     DREAVHT"
     gene            1282..>1580
                     /locus_tag="VE844_14540"
     CDS             1282..>1580
                     /locus_tag="VE844_14540"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HZC02520.1"
                     /translation="MQTKITVLIVDDHAIVRQGCRLLFEQAGLEVVGDAQCGEDAYGQ
                     YLKHRPQVVVIDLSMQGMGGFETIRRIHAQGPEVRIVVFTMHDDPSVAARALRAGV"
BASE COUNT          316 a          438 c          504 g          322 t
ORIGIN      
        1 aggtgtgcac agcctcacgg tcgcgggcga gcaggctctc gggcgcgacc ccgttcccgg
       61 tgagctcgtt gtcggcgaag atatagctga ggtcaagatc cgtggtatca ttttcccagc
      121 cgagcttgcc gaagagctga cggatccgtg atggcgattc cacgcgccag ccctcttcat
      181 ccagggcgtt gaaggtgaga taccaatcga ccttgtcccg gtagccgccg tgctcggcct
      241 cgaccgccca gcggccgaac gagcccccgg aggcctcaac ctcggtgccc tggaatgcga
      301 agccgctctt ggtccgcacc gccaaggcac cgcccagggt gttgaggccg aagaggggat
      361 tcgaccctgg gataaggtca atgctggaga tggcagactg agggataaga tcccagttca
      421 ccgtgtcgcc gaagccctcg ttgaagcgcg caccgtccag gtagaccgag agcccgatgg
      481 cgctcccgag gagcggcgag gccagaaagc cccgggaggt gatatcgttc tgaaagggat
      541 tgttctgcgc ggcgttcaag tggatgctcg ggacgttacg gaacagcatc tcggagagat
      601 ctatcgggtt ctggtcctcg aactcctcgg ctgtgaggga gcgcacgttg gcggggacct
      661 tctcaagcgg tgtcccaagc gcgggcaggg gtgtggtgcc gatgacctcg acctcgggta
      721 gttcgagttc cgtgaccgga ttttcctgtt cttcgctgga cgcggcggag gatattaaca
      781 acggcaacgc gtacaatgcc gaaagggcgc gccgtcgcct gttgcgagtg ttgagtgcga
      841 acaagttcat gaagtctgcc ttttcgtgcg atttattcct gcgtatcgca gtgtggggac
      901 cgttagccca gatggactac tttaggcgaa gcgatggtcg cggcgacagc gggcgtcgcc
      961 acgagttcgg tactaatctg tcccgaattg acgtgcctta tttcccaaag ggtgttgggt
     1021 gatttcccgc tgtgttgctg actgtttgtc cctgaaagtg cagaaaacaa gtcaatcctt
     1081 tatcctggtt aacatcctca attagatggc gtaatcatcc ccaacatcag gaaagtctac
     1141 gctgttgagg tggtccacgc tccggtccga atacgtgccg gaagggatac aatgactgcg
     1201 ctaagcgacc catcagagcc cgatcaagcc acttacgcaa gtgattgacg gaatacttac
     1261 gactcaaggg taaagattaa agtgcaaacc aaaatcacgg tgttgatcgt cgatgaccac
     1321 gccatcgtgc ggcagggctg ccggctgctg ttcgagcagg ccgggctcga ggtggtcggg
     1381 gacgcccagt gcggcgagga cgcttatggg caatacctga agcaccggcc gcaggtcgtg
     1441 gtaatagacc tctcgatgca gggcatgggc ggtttcgaaa ctatccggcg gatccacgca
     1501 caggggcctg aggtgcggat cgtggtcttc accatgcacg acgacccgtc tgtagcagcc
     1561 cgtgccttgc gcgctggcgt
//
LOCUS       DASQSL010001417         2208 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_132952, whole genome shotgun sequence.
ACCESSION   DASQSL010001417 DASQSL010000000
VERSION     DASQSL010001417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2208
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132952"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..198
                     /locus_tag="VE844_14545"
     CDS             <1..198
                     /locus_tag="VE844_14545"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809230.1"
                     /note="Catalyzes the reversible hydration of unsaturated
                     fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HZC02521.1"
                     /translation="KHIDALIKAAPLASAECKQLLRRLSPVSEELREVTAEIFARLRV
                     GSEAREGIRAFLEKRKPSWQS"
     gene            195..1067
                     /locus_tag="VE844_14550"
     CDS             195..1067
                     /locus_tag="VE844_14550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020593927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA lyase"
                     /protein_id="HZC02522.1"
                     /translation="MNTHGAPDCVKIVEVGPRDGLQNEPRVVDTPTKIAFIDCLSATG
                     LTAIEVTSFVHPTSIPQLADAEAVVRGITRRAGVTYFALVPNLRGLERALSVGVDAIA
                     VFTAASETFNQRNIHCGIEGSLSRFTPVLARAKSLGIEVRGYISCALGCPYEGAIKPQ
                     QVASLAERLYAMGCAEISLGDTIGVGTPLQAQTLVKTVAAVMPIERLALHFHDTHGRA
                     LANIRACLKLSVSIIDASVAGLGGCPYAPGAPGNVATEAVVAMLEDMGIATGIDLDKL
                     GEAGRFISTKLGRG"
     gene            1167..1643
                     /locus_tag="VE844_14555"
     CDS             1167..1643
                     /locus_tag="VE844_14555"
                     /inference="COORDINATES: protein motif:HMM:NF013853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF29 domain-containing protein"
                     /protein_id="HZC02523.1"
                     /translation="MNAKLNNTSPPLPHSLHDQDFYTWALETARAIRERRFAGIDWEA
                     VAEELEDMGRSEARALESQLARLLAHLLKWQYQPNQRQLSENSWRATIENARREIRKL
                     LRENPGLKSRLPELFLEAYPQGIDWAVIKTNVSRSVFQSTCPWNLEQAMDDGFWPD"
     gene            complement(1640..1888)
                     /locus_tag="VE844_14560"
                     /pseudo
     CDS             complement(1640..1888)
                     /locus_tag="VE844_14560"
                     /inference="COORDINATES: protein motif:HMM:NF015279.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1931..>2208)
                     /locus_tag="VE844_14565"
     CDS             complement(1931..>2208)
                     /locus_tag="VE844_14565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017749961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TIR domain-containing protein"
                     /protein_id="HZC02524.1"
                     /translation="LVSSDFIASDYCYDIEMERALEKHRAGEARVIPIILRHCDWDTA
                     PFAKLQALPKDAKPVTRWNDRDEAWTDVARGIRKVVEELRKTLFKED"
BASE COUNT          476 a          623 c          605 g          504 t
ORIGIN      
        1 aagcatatag acgccttgat caaggccgcg cccctggcta gcgccgaatg caagcagctg
       61 ctcaggcgcc tatcgcccgt ctctgaagag ctccgggagg taaccgctga gatcttcgcc
      121 cggcttcgcg tgggttccga ggcacgtgaa gggataaggg ctttcctgga gaagcgtaaa
      181 ccgagttggc agtcatgaac acccatggcg cgcccgattg tgtcaagatt gtcgaagtcg
      241 gcccgcgtga tggtctgcaa aatgaaccgc gggtggtgga taccccaacc aagatcgcgt
      301 ttattgactg cctctccgcc acgggcctta ccgctatcga ggtaacaagc ttcgtccatc
      361 ccacatccat cccgcagctg gccgacgccg aggcagtcgt tcggggaatt acccgccgtg
      421 cgggcgtgac ctattttgcc ctggtgccca atctgcgggg tctggagcgc gccttgtcgg
      481 taggggtgga cgccatcgcc gtctttaccg ctgcctcgga gaccttcaat caaaggaata
      541 tccactgtgg catcgaggga tccctgagcc gctttacacc tgtcctggca cgggccaagt
      601 ccttgggcat cgaggttcgt ggctatatct cctgtgcttt gggttgccct tatgagggtg
      661 cgatcaagcc gcagcaggta gcaagtcttg cggaacggct gtatgcgatg ggctgcgcgg
      721 agatctccct cggcgacacc attggcgtcg gcacgccgct tcaggcacaa acgctagtaa
      781 aaacagtggc tgcggtcatg cccatcgagc gcctggcctt gcatttccat gacactcacg
      841 gtcgagcgct cgccaacatc cgcgcatgct tgaagcttag cgtctccatc atcgacgcct
      901 cggtcgcggg tctcggcggc tgtccatatg ccccaggtgc gccagggaat gtcgccacgg
      961 aagccgtggt ggcgatgctt gaggacatgg ggatcgccac tggcattgat ctcgataagc
     1021 tcggcgaggc cgggcgattt atcagcacca aactggggcg ggggtagcaa gcacaggcag
     1081 ggttaggacg ggcagcgcaa ttctacttta gctatggatc ccaaaacggc aaaagtcatc
     1141 tctttgaatt tgtcagtagc acctttatga acgccaagct taacaatact tccccacccc
     1201 ttccgcactc actgcatgat caggatttct atacctgggc gttagagacg gcccgtgcta
     1261 tccgagagcg gcgctttgct gggatagatt gggaggcggt tgctgaagag ttagaggata
     1321 tggggcgcag tgaagcaaga gcattggaaa gccaattagc caggctgctt gcgcatttgc
     1381 tcaagtggca gtatcaaccc aaccaacgac aactctctga aaacagttgg cgggcgacca
     1441 tcgaaaacgc tcgccgagag atacgtaagc tattgcgaga aaaccctgga ctgaagtcgc
     1501 gtctgccgga gcttttttta gaggcgtatc cgcagggcat agactgggcg gtcatcaaaa
     1561 ccaacgtgtc tcgctcagtc tttcaatcta cctgtccctg gaacttggaa caggccatgg
     1621 acgacggctt ttggccagat taacgcacat tagtgtcgca cagtaactgg taaagctgat
     1681 ccaccctagg atcccgatga catctggcga ccgtcgcgat gagtttttga tcacggcgat
     1741 tccgcgtcaa acgatattcc agttcggtta agaccgtgtt tgcgcctggt cgatctgctt
     1801 tattgaccac aacaatatca accagatcga gcatagcgat cttctgaagt tgcaaacggc
     1861 tgccataatc gggtcccatg accaggaccg tcttgttgac cctgaccttt ctgactctat
     1921 tttcctcctt ttaatcctct ttgaataaag tctttctcaa ttcctcaact accttgcgaa
     1981 tgccccgagc cacatccgtc caggcctcat cgcgatcgtt ccatctcgtc actggttttg
     2041 catccttagg tagagcttgc agcttggcaa agggtgctgt atcccagtca caatggcgaa
     2101 ggatgatcgg aatcactcga gcttcccctg ctctatgctt ctccagcgcc cgttccattt
     2161 ctatgtcata acagtagtct gaggcgatga aatcagagct gacgagaa
//
LOCUS       DASQSL010001418         3433 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_189063, whole genome shotgun sequence.
ACCESSION   DASQSL010001418 DASQSL010000000
VERSION     DASQSL010001418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3433
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189063"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..537
                     /locus_tag="VE844_14570"
     CDS             <1..537
                     /locus_tag="VE844_14570"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HZC02525.1"
                     /translation="FDKGNRLKASTYAKHAGYIEGQWLLEDLERTIFKPDRISQQHIE
                     RARWGSLLNPKLIHLVVIKPNNLSIRDLYRYIHFLKINNQNRLQYEQALWFKITYPLA
                     TGVMVFLAIPIVLGTLNKATVGQRVVLGSCIGLVFHIFNKATGQLGVVLNLNPTLSVT
                     FPTVLALLIALVLMRKVA"
     gene            564..1577
                     /gene="lpxD"
                     /locus_tag="VE844_14575"
     CDS             564..1577
                     /gene="lpxD"
                     /locus_tag="VE844_14575"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: protein motif:HMM:NF002060.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HZC02526.1"
                     /translation="MYTLEQLAQALEGRVVGDASLMIGGVRPFDQADTGDITLAADPK
                     YQNHLDQTRASAVIVALGVEAPGKPLLQVAHPKLAFARAIALFYSEPFQAQGISPLAF
                     IGKECRIAANVSIYPFVYVGDRAEIGERVTLHAGVVVGADCRIGAGCTLYPQVTLYPG
                     VTLGQNVILHSGAVIGADGFGYVFDGQRQVKILQTGTVEIHDEAEIGANSTIDRATFG
                     ATVIERGAKIDDQVHVGHNCRIGENTVISSGVGISGTVTVGKNCILAGQVGVADHVTI
                     GDNVVALARTGVTKDIPGGQTVSGYPPQDHREELRFQALLRRLPGLFEEWQAFKSRLT
                     KGS"
     gene            2003..3277
                     /gene="iscB"
                     /locus_tag="VE844_14580"
     CDS             2003..3277
                     /gene="iscB"
                     /locus_tag="VE844_14580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013032720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-guided endonuclease IscB"
                     /protein_id="HZC02527.1"
                     /translation="MNRVFVLDTEKRPLMPTTPARARRLLAVGRAAVYRRKPFTIILK
                     YHVDPTLQPVELKLGPGSKTTGIALVGEFHKQGRVVLFGANLNHRGDSIRKRLADRRA
                     IRRGRRNRHTRYRAPRFDNRTRARGWLPPSLTSRVGNVKTWCRRLLSRIPVVCAAVEA
                     VRFDTHQLVNPEVSGVGYQQGTLAGYEVREYLLEKWGRRCAYCGKENVPLEIEHIHPK
                     SNGGSSRVSNLTLACKPCNQRKANRDICESLAGKPEAFKRIEAQAKAPLKDAAAINSI
                     RYDIGNAVKSLLPTSFWSGRRTKFNRIAQGYAKDHWIDAVCAGESGAKVTIPDTIKPL
                     VIQSTGRGQRQVQKSDKYGFPRNAAGRVKQVHGFRTGDLARLSVPKGKYAGERAGRIA
                     GVRANGRFDLNRITSTWRNFQLLQRADGYAYS"
BASE COUNT          770 a          957 c          996 g          710 t
ORIGIN      
        1 ttcgataaag gaaatcgtct gaaagccagc acctatgcca agcatgcagg ctacatcgag
       61 ggccagtggt tgcttgagga tctcgaacgg actattttta aacccgatag aataagccaa
      121 cagcatatcg aacgcgcccg ctggggatcc ttgctgaatc cgaaactcat tcatctggtc
      181 gtgatcaagc caaataatct gtccatcagg gatctctata ggtatatcca tttcttgaag
      241 atcaataacc aaaacaggct gcaatatgaa caagctctgt ggtttaagat cacctatccc
      301 ctggccaccg gcgtcatggt gtttttggct atccccatcg tgctcggtac cctgaataag
      361 gccaccgtag gccagcgcgt ggtcttgggg tcatgcattg gtctggtctt tcatatcttc
      421 aataaagcca ccggccaatt gggggtggtg ctgaatctaa acccgactct aagtgtaacg
      481 tttcccaccg tgttggcctt gctgatcgcc ttggtgttga tgcgcaaggt ggcttagctt
      541 tagcgccaac tgaaggagga accatgtata cgctcgaaca actcgctcaa gccctggagg
      601 ggcgagtggt gggggatgct tcgctgatga tcggcggggt ccggccgttt gaccaggccg
      661 ataccggcga tattaccctg gccgccgatc cgaagtatca aaatcatttg gaccagacac
      721 gcgcctcggc ggtgatcgtg gccttagggg ttgaagcccc gggaaaacca ctgctgcaag
      781 tcgcccatcc caaactcgcc tttgcccgcg ccatcgcctt attctactcc gagccatttc
      841 aggcgcaggg gatctccccg ttagcgttca tcggtaagga atgccggatc gcagcgaacg
      901 tttccatcta tccctttgtg tatgtgggtg atcgcgccga gatcggcgag cgcgtcacgc
      961 tccatgcggg ggtcgtggtc ggggcagact gccggatcgg cgcgggttgt accttgtacc
     1021 cccaggtaac gctttatccg ggcgtgacgc taggccagaa cgtgatcctc catagcggcg
     1081 ctgtgattgg ggcggatggc ttcggttatg tcttcgatgg ccagcgccag gtcaagatcc
     1141 tccagaccgg caccgtggag atccatgatg aagcggagat cggggccaat agcacgattg
     1201 atcgcgctac cttcggcgcc acggtgatcg aacggggagc caagatcgac gatcaagtgc
     1261 atgtgggtca taattgccgg atcggggaga acacggtaat atcgagcggc gtcgggatct
     1321 cagggacagt cacggtgggc aagaattgta tcctggccgg gcaggtcggg gtcgccgatc
     1381 atgtcacgat cggcgataac gtcgttgccc tggcaagaac cggcgtgacc aaggatatac
     1441 ctggaggaca gacagtgtcg ggttatccgc cgcaagatca ccgtgaggag ttaaggtttc
     1501 aggccctgtt gcgccgctta ccgggccttt ttgaagagtg gcaggcattc aaatcccgtc
     1561 tcaccaaggg ctcgtaaaca agcaccgtgg aactcccccc tcacccctca cgagcccttt
     1621 ccgcaggggt cttgaacaag cactgtagaa tccctatcct taccggccag ttagcaagat
     1681 tggagcgagt gctgagaaag ttgagtcccg gacttgagca ttcaacttcg acatccctgt
     1741 ctcagtttca tgctcatgcg tgtgttgcca gcccacgagc cgaagacgtg cgagactcaa
     1801 ccagggtcag ctaccaagag aaatcttgac ggggctacgt tatcgaaagc agctaaagtc
     1861 ctaccctggg gtacttctcc agctccaggc tctagaactc ggggagaaac caggcaagtc
     1921 cggtaaagca gccggggtac ccgagacgtg cggatcgatg acattcccga ggagaccata
     1981 actttaaagt gttgcgaaag ctatgaacag agtatttgtg ttagacaccg agaagaggcc
     2041 gctaatgcca accacaccgg cgagagcaag acgtctgctc gctgtgggca gggccgccgt
     2101 gtatcgccgc aagcccttca cgatcatcct gaagtaccat gtcgatccca cacttcagcc
     2161 tgtcgagctc aagctcggcc cgggcagcaa gaccacaggt attgctctag tgggcgagtt
     2221 tcataagcag ggccgggtgg tgctctttgg cgcaaacctt aatcaccggg gcgatagcat
     2281 ccgcaagcgc ctggctgacc ggcgtgctat ccgtcggggc aggcgcaacc gccatacccg
     2341 gtaccgtgca ccgcggttcg ataatcgtac tcgcgccagg ggttggctgc ctccatcgct
     2401 cacgtcccgg gtgggcaacg taaaaacctg gtgccggcgg ctgctctcca ggattccggt
     2461 tgtatgtgcc gccgttgaag ccgtacgctt tgatacccac cagctggtca acccagaggt
     2521 tagtggggtt ggttaccaac aaggcacgct agccgggtac gaggtgcgcg agtatcttct
     2581 cgagaagtgg ggccgcaggt gcgcctactg cggtaaagag aatgtaccgc ttgagatcga
     2641 gcacattcac cccaagtcca acggcgggag cagccgagta agcaacctca ctttggcctg
     2701 caagccctgc aaccagcgca aggcgaaccg ggatatctgt gagtctctag ctggcaagcc
     2761 cgaggctttt aagcgcatcg aggcacaggc caaagcgccg cttaaggatg ccgctgctat
     2821 caactcgatc cgctatgaca taggcaacgc tgttaagtct ctattgccta ccagcttctg
     2881 gagcggcagg cgcaccaagt tcaatcgcat cgctcaaggt tatgcaaaag accactggat
     2941 tgatgccgta tgcgcgggcg agtccggcgc gaaggtcacc atcccggaca cgatcaagcc
     3001 gcttgttatc cagtccaccg gacgcgggca acgacaggta cagaaaagcg acaaatacgg
     3061 cttccctcgc aacgcagcag ggcgagtgaa gcaggtgcat ggatttcgga cgggcgacct
     3121 ggcccggcta tccgtgccca aggggaaata tgccggtgag cgtgccggcc gaatagcagg
     3181 cgtgcgtgcg aatggccggt ttgatctcaa tcgaattacc agcacttggc gtaatttcca
     3241 actgctgcaa agggcggacg gctatgcgta cagttaggcg cacaccgtcc gggacaagtt
     3301 taattgaaag atcctcggga cgcgcctcaa gaacgcgctt gtattgcgat tgcgttccac
     3361 aatggcttaa acccgagagg tcgcatacgt ccatgtatcg ctcctaggta aagaatgggt
     3421 gctgtccctc taa
//
LOCUS       DASQSL010001419         1914 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_115769, whole genome shotgun sequence.
ACCESSION   DASQSL010001419 DASQSL010000000
VERSION     DASQSL010001419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1914
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115769"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            54..1577
                     /locus_tag="VE844_14585"
     CDS             54..1577
                     /locus_tag="VE844_14585"
                     /inference="COORDINATES: protein motif:HMM:NF025180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC02528.1"
                     /translation="MSKPSRRPTREARKQHKQKRRAAQRALRARRAEAGCLQRTETVS
                     NRLCPYRTKAEEQAAREDAVADQLGVFRALLPKLLKELSKIPDPRQPKKVRHKLTVVL
                     LYGLLSFVFQMASRREANRELSRPGFLDTLQGLFPELESLPHADTLNRLLSQIEVSQL
                     EHAHVALLRRLIRNKKFRRYLISQCYPVAIDGTQKLVRCGQWWGEEWLERRRQTAEGE
                     QVQQYVYVLEANLVLHNGVSLPLLSEFLSYAEGDPDDHKQDCELKAFYRLAARLKAYF
                     PRLPMLLLLDGLYPNGPLMALCRQYGWQFMIVLPDKCLPSVWEEVEALKPRQAQNRKY
                     QYWRGRQQRFWWVNDITYSYEGDRKSLLVHGVGCEETWQEVDPESGELSAKQTQHMWL
                     SSQRLNPYNVHERCNLGARQRWGIETSLLVEKCQGYHYEHAFSYTWNAMKGYHYLMRL
                     AHLVNALALATKRVASQVRTLGVQAFLRWVRESCAHRWLRWEWIERFRATPLQLRLQ"
BASE COUNT          408 a          545 c          589 g          372 t
ORIGIN      
        1 gtggcagatt ctcccccctc aaccaacccc ggtcagaagg gggggaatct accatgagca
       61 aaccgagccg ccggccgacc cgagaagccc gcaagcagca taagcaaaag cggcgcgccg
      121 cgcaacgggc gttacgtgcc cgccgagccg aggcggggtg cttgcagcgc actgagacgg
      181 tctcgaaccg cttgtgtccc taccgcacga aggccgaaga gcaagcggcg cgggaagacg
      241 ccgtagcaga ccagctggga gtgtttcggg cgctgctgcc gaagctgctg aaagagttga
      301 gcaagatccc tgacccgcgg cagccgaaga aggtcaggca caagttgacg gtggtgttac
      361 tctacgggct gctcagtttt gtatttcaga tggcctcgcg gcgcgaagcc aaccgtgaac
      421 tcagccggcc ggggtttctg gataccctgc aggggttgtt cccggagctg gaaagtctac
      481 cccatgcgga tacgctgaac cggctgttaa gccagatcga ggtcagccag ttagagcatg
      541 cccatgtggc gctgctacgg cgtttgatcc gcaacaagaa gtttcgccgc tacttgatca
      601 gccagtgcta tccagtagcc atcgatggga cacagaagct agtgcgctgc ggtcagtggt
      661 ggggcgaaga gtggttagaa cgccgccgcc aaacggccga gggtgagcag gtccagcagt
      721 atgtctatgt gctagaagca aatctagtgt tgcacaacgg ggtgagcttg ccgctactga
      781 gcgaatttct cagctacgct gaaggtgatc cagacgatca caaacaagac tgtgagttga
      841 aagccttcta ccgtctggcg gcgcgtttga aagcctactt tccgcgcctg ccgatgctgc
      901 tgctgctcga tgggctctat cccaacgggc cgctgatggc attatgccgg caatacggct
      961 ggcagtttat gattgtcttg cccgataagt gcttgccctc ggtttgggag gaggtcgagg
     1021 cgctcaagcc gcgccaagcg caaaaccgca aatatcagta ttggcgcggg cgccagcagc
     1081 ggttctggtg ggtcaacgac atcacctata gctatgaggg ggaccgcaaa agcctcctgg
     1141 tgcatggagt cggctgtgaa gaaacctggc aagaggtcga tcctgagagt ggcgagctta
     1201 gcgctaagca gacccagcac atgtggctat ccagccagcg cctgaacccc tacaacgtcc
     1261 acgagcgctg taaccttggc gcccgtcaac gctgggggat cgagaccagc ctcctggtcg
     1321 aaaagtgcca gggctaccac tacgaacacg ccttctcgta tacctggaac gcgatgaagg
     1381 gttaccacta cctgatgcgc ctggcgcacc tggtgaatgc cctagcactg gccaccaaac
     1441 gggtggcgag ccaagtgcgc acactgggcg tacaggcgtt tttgcgctgg gtgcgcgaga
     1501 gttgcgcgca tcgctggctg cggtgggagt ggatagaacg ctttcgggcc acgccgttgc
     1561 agctgcgact ccaatagccg tccccttgcg cactgccctg actgccaccg aggccggtct
     1621 aagctgggtt cggcaggggt cctttgcgct cctcggaagc catccgttga aaaaagcgac
     1681 cgtctgtctc ctgtaacttc tgtttcggtg acccttacca cttgaaacgc accaacgggc
     1741 agcgggcggt tagtgacggt gggggaaaat agcaaattag gacaactcat gcgtcagggc
     1801 tgcagcttct tagcgccgct tgacactgat tgtcctatat aggaaaattt tattgatcaa
     1861 gcccgcggat ccggctctca tggaaacgtc atgcgtatct ttactgcctc gctc
//
LOCUS       DASQSL010001420         1202 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_189074, whole genome shotgun sequence.
ACCESSION   DASQSL010001420 DASQSL010000000
VERSION     DASQSL010001420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1202
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189074"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(162..431)
                     /locus_tag="VE844_14590"
     CDS             complement(162..431)
                     /locus_tag="VE844_14590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02529.1"
                     /translation="MRSHGQATVWGTHIGVGRGRSETGWYRQLRQWWEAHKAAHEQAK
                     LRALNARWDAQREAVRPLPAWAAADMVATQYAFATATRLSGLAIY"
     gene            complement(794..976)
                     /locus_tag="VE844_14595"
     CDS             complement(794..976)
                     /locus_tag="VE844_14595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02530.1"
                     /translation="MARRRPLTLLDVIQAVSEVAASDQEMLAAVAHLINSGQVRLCGD
                     SAGATIDLSATKDAAA"
     gene            complement(999..>1202)
                     /locus_tag="VE844_14600"
     CDS             complement(999..>1202)
                     /locus_tag="VE844_14600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02531.1"
                     /translation="QSKQSAADMIDGSSPRDRAGAGGETRLRAFSRPVVRMRQTLMPW
                     KAPRHGACYFSTCIGNVQLRNTG"
BASE COUNT          237 a          380 c          321 g          264 t
ORIGIN      
        1 tacagatccc ccagatcctt accatctcaa gcctcgtcac ggtttccttg acgccggtgc
       61 ggagttactg agcgttgcat gcaaaactta acttccggcg tcgatgcaag gtccagcaat
      121 gtgctgctca ccaggcaaaa attaagctat ggatgcaacg gtcagtaaat ggcaaggccg
      181 gagagcctcg tggctgtcgc gaaggcgtac tgtgtcgcta ccatgtcagc ggcagcccag
      241 gctggtaagg gccgtaccgc ttcgcgctgg gcgtcccagc gggcgttgag ggctctgagc
      301 tttgcctgct cgtgcgccgc cttgtgagcc tcccaccact gtcgtagctg ccgataccag
      361 ccagtttcac ttcgcccgcg gcccacaccg atgtgagttc cccagacagt tgcctgtccg
      421 tgtgatcgca tgactatctc ctttgcgctt ttttgagtgt ggtgattcgc tgctacgtgc
      481 ggtcggatcg tttcaccgct tgagaatcaa tataggccct catcatcaaa caatctaacg
      541 aatcgtcgtc atatatatca tgaactatat gcatgtattg aggctctgaa cctggaaagc
      601 ggcgacgctc acaccgtcca aagaaacgtc ataataccca gagtgagcaa cgccgtcgcc
      661 gcctcccccc aggtgatcac tacatattct cgccgcacgg cattttatcc ctctgacctt
      721 agcgtcgcgg cccgtggtgg gtcacgttcg gcccggtcct ggctagccat acgtggcacc
      781 gagctcacaa acctcaggcc gccgcgtcct tggttgccga tagatcaatg gtcgccccag
      841 cggaatcgcc gcacagccgc acctggccgc tgttgatgag gtgggcaacc gcggccagca
      901 tctcctgatc gctcgcagcc acctcactca ccgcctggat cacgtcaaga agcgtcaagg
      961 gtcgacgtct agccatggga aagctctcct atccatgatc atccggtgtt gcggagttga
     1021 acgtttccga tgcacgtgga aaaatagcaa gcaccatgcc ggggcgcttt ccagggcatg
     1081 agcgtctggc gcatccgcac taccggcctg ctaaaggcgc ggaggcgcgt ctctccaccg
     1141 gctcctgccc gatctctggg actgctcccg tcaatcatat ccgccgctga ctgcttagat
     1201 tg
//
LOCUS       DASQSL010001421         1308 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_189082, whole genome shotgun sequence.
ACCESSION   DASQSL010001421 DASQSL010000000
VERSION     DASQSL010001421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1308
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189082"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..661)
                     /gene="bioD"
                     /locus_tag="VE844_14605"
     CDS             complement(<1..661)
                     /gene="bioD"
                     /locus_tag="VE844_14605"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016704081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004141 - dethiobiotin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HZC02532.1"
                     /translation="MHRAIIEPILSQQARGYFVTGTDTGVGKTWITVGLMLALRGQGL
                     TVAGMKPVATDCYQTPAGLRNEDAVKILAHTSQPFPYEWINVYSFEPAIAPHLAAREQ
                     RVEMTVEAILAAHKRVADRAEFMVVEGVGGWRVPLNERQGVWDLARHLEYPVVLVVGL
                     RLGCINHALLTAEAISTDGLDLAGWVANQIAPDYPRLEATLDTLCARLQAPMLAYIPW
                     LD"
     gene            complement(661..>1308)
                     /locus_tag="VE844_14610"
     CDS             complement(661..>1308)
                     /locus_tag="VE844_14610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019881328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HZC02533.1"
                     /translation="LEARRRAPRFFSHERYVHGDAEALPLSATSVDMLFSSLTLQWCN
                     DLDQVFRELRSVLKVNGLVMLSTLGPDTLKELRWSWAEVDDSHPHVHAFVDMHDLGDA
                     LIRAGFSSPVLDVEHFILTYRDLYALMRDLKALGASNRSMARRRGFTGKSSLAKLQQG
                     YEHYRREGLLPATYEVVYGHAWVPEQDTRPQDGSTVATFPLAELRHSRRERIRGR"
BASE COUNT          283 a          392 c          370 g          263 t
ORIGIN      
        1 gatcaagcca gggaatgtag gccagcatcg gcgcctgaag acgggcacat agggtatcga
       61 gggtggcttc caggcgtgga taatcgggag cgatttggtt tgctacccaa cccgcgagat
      121 ccaggccatc cgtgctgatc gcctcggcgg tcagcaaggc gtgattgata cagcccaggc
      181 gcaagccaac gacgaggacc actggatact cgaggtggcg ggcaagatcc caaacgccct
      241 gccgctcatt gagcgggacc ctccaccctc ctacaccctc gactaccata aactctgccc
      301 ggtctgcgac tcttttgtgg gcagcgagga tggcctccac agtcatctct accctctgct
      361 cccgtgctgc caggtggggg gcaatggcgg gttcaaagct ataaacattg atccactcgt
      421 aaggaaacgg ttgacttgtg tgggccagga tctttacggc atcctcgttg cgcagccctg
      481 caggggtttg atagcaatcg gtagcgaccg gtttcatgcc ggcgacagtt agcccttgac
      541 cgcgtagagc gagcatcagg cctactgtta tccaggtctt gccaacccct gtgtccgtcc
      601 cggtaacaaa gtaaccgcgc gcttgttggc tcaggatggg ttcgattatg gctctgtgca
      661 tcatcgccca cggatgcgct cgcgccgcga gtgcctgagc tctgccaggg gaaaagtcgc
      721 tacggtgctg ccatcctgcg gccgagtatc ctgctctggc acccaggcat ggccgtagac
      781 gacctcatag gtggcaggta gcaacccctc gcgccggtaa tgctcatagc cttgctgcaa
      841 cttggcaagg ctgcttttgc cagtgaatcc acgccgccgt gccatcgagc gattgcttgc
      901 ccccagagcc ttaagatcgc gcatcagggc gtacagatcc cggtaggtca agataaaatg
      961 ctctacgtcc agcaccgggc tactaaagcc tgcccgaatc aaggcatctc caagatcatg
     1021 catatcgaca aaggcgtgta catgagggtg actatcgtcg acctcagccc agctccagcg
     1081 taactctttt agggtatcag gacccaaggt cgataacatc accaggccat ttaccttgag
     1141 cacgctccta agctcgcgga acacttgatc aagatcgttg caccactgca aggtgaggct
     1201 agagaagagc atgtctacac tggttgcaga gagtgggaga gcctctgcat ccccatgcac
     1261 atagcgctca tgggaaaaga accgcggtgc ccgccgacgc gcctctag
//
LOCUS       DASQSL010001422         2655 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_24674, whole genome shotgun sequence.
ACCESSION   DASQSL010001422 DASQSL010000000
VERSION     DASQSL010001422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2655
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24674"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            330..1745
                     /locus_tag="VE844_14615"
     CDS             330..1745
                     /locus_tag="VE844_14615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011432419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0042398 - cellular modified amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-cysteine ligase family protein"
                     /protein_id="HZC02534.1"
                     /translation="MGQEIPTSRFSQHDFARFSRRLREETALFGRYLQSGRVDCQGAV
                     GGFELEAWLVDQRGAPSPINEEFLKRLHSPLVVSELSSFNIEINGTPQPLKGQALTQI
                     RQELENTWAQCRATAAQSEADLVAIGTLPSVREADLNLARMSPSHRYRALNEQVLSLR
                     RGAPLQLDIQGREHLGTTHHDVMLEAATTSFQIHLQVPADRAVRLYNAAIIAAAPMVA
                     VSANAPFFFGHDLWDETRIPLFEQSVDVGATGHKRVTFGNRYAQGSLLECFEENLLHY
                     PVLLPIDMDQDPGRFSHLRLHNGTIWRWNRPLIGFDSNGTPHLRIEHRVVPAGPSLID
                     SLANAAFFFGLAYALADLPEPPEHRLEFAKARENFYKAARESLAASIHWFDGTLSPLQ
                     GLVTEQLIPVARAGLEQLGIAAEEIATYLDIIQSRAGSGQTGASWQRRWVARYGRDWE
                     GLCRAYMERQRAGRPVHEWDY"
     gene            1729..>2655
                     /locus_tag="VE844_14620"
     CDS             1729..>2655
                     /locus_tag="VE844_14620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011429173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family metallopeptidase"
                     /protein_id="HZC02535.1"
                     /translation="MSGIIRQMLNQLHALPPGLLSLEAEQLYQALNGPTLIHLPGRRE
                     PPLFVSVLLHGNETTGWEAMRGLLQRYREKALPRALSILIGNIDAARYRKRHLPHQPD
                     YNRIWSGEGTPEHAIMREVLEEMRRRGVFASVDVHNNTGRNPHYACVKRLDPRCLQLA
                     TLFSRTVVYFLRPLGVQSMAFASLCPAVTIECGRPGEIYGVQHALEYLEACLHLLEVP
                     THPVAASDLDLFHTVGIVKVPDHVSLGIGQGDCDLNLHPEIDRLNFRELPVGTSFGVV
                     GNGLGMPLDMRNEAGEEVSKRFFVIEDHELRIR"
BASE COUNT          511 a          760 c          795 g          589 t
ORIGIN      
        1 cacaaaatgg gtgatagctt cccggagcat ctcttgacag aaggttttta ccggtggagt
       61 attgaggaac gatcctttac cctgaatttg gatataggcg atgttgtttt ccttcgctac
      121 gcggattgtc gacgtttcca tatggagttt cgctagccct attttacttg cccgcgtggg
      181 ggattgctat gaccccgtag acagaatctt cctcggcgtt ggataatctc ttactaggtt
      241 gcatcaaaaa gcaagacaag cttttgaata acccgttaca atgcatcgcc aagagttact
      301 tcaaaccttc gtgaggcagg tagtttctta tgggccagga gatcccgacg agccggtttt
      361 cgcagcatga ttttgcccgc tttagccggc gcctgcgcga ggagacagcg ctttttggcc
      421 gttatctgca gagcgggcgg gttgactgcc agggtgcggt aggaggcttt gagctcgaag
      481 cgtggctggt ggatcagcgt ggcgcgccga gccccatcaa tgaagaattc ctcaagcggc
      541 tgcacagccc gctcgtggtg tcagagcttt cctcttttaa catcgagatc aacggaaccc
      601 cccagccgct caaagggcag gccttgaccc agatccggca ggagctggag aacacctggg
      661 cgcagtgccg cgcaacggcc gctcaaagcg aggcggatct ggtggcgatc ggtactctac
      721 cgagtgtccg cgaggccgat ctcaatctcg cccgcatgtc gccgagccac cgttaccgcg
      781 cgctcaatga gcaggtcttg agcctgcgtc ggggcgcgcc gctgcaactc gatatccagg
      841 gtcgcgagca tctcggcact acccatcacg atgtgatgct ggaggcggcc acgacctcgt
      901 ttcagatcca cctgcaggta ccggcggatc gggccgtgcg cctgtacaat gcggccatca
      961 tcgccgccgc gccgatggtt gcggtgtctg ccaatgcgcc atttttcttt ggtcacgatc
     1021 tctgggacga gacccgtata ccgctgttcg agcagtcggt ggatgtaggg gctacaggcc
     1081 ataaacgggt caccttcggt aaccggtatg cacaaggctc gctgcttgag tgtttcgagg
     1141 aaaacctgct ccattacccg gtattgctgc ctatcgatat ggaccaggac cccgggcgat
     1201 tcagccacct gcgtctgcac aacggcacca tctggcgctg gaaccgcccg ctcatcggtt
     1261 ttgatagcaa cgggactccg catctccgca tcgagcaccg ggtggtgccg gccggcccca
     1321 gtctcatcga tagcctcgcc aatgccgcgt ttttcttcgg tctcgcctat gccctggcgg
     1381 acctaccgga gccaccggaa caccgattgg aatttgccaa ggcccgggaa aatttctata
     1441 aggcggcgcg cgagagcctg gcagcctcta tccactggtt tgacggtacc ctgtctccgc
     1501 tgcaaggtct tgtgaccgag cagcttattc cggtggccag ggcaggcctc gagcagcttg
     1561 ggatcgcagc ggaagagatc gctacttacc tcgatatcat ccagagccgg gcgggttccg
     1621 ggcagacggg tgcctcgtgg caacggcgct gggtcgcacg ctatggccgc gattgggagg
     1681 gcctgtgccg agcctatatg gaacgccaac gagctggcag gccggtgcat gagtgggatt
     1741 attaggcaga tgctgaatca attacacgca ttaccgcccg gactcttgtc gctcgaagcc
     1801 gagcaactct atcaagcgct gaatggcccg accttgattc atctgcccgg ccgccgagaa
     1861 cccccgctgt ttgtctctgt gctactccat ggcaacgaga ccaccggctg ggaagccatg
     1921 cgcggcctct tgcagcgata tcgagagaag gcgcttccca gagccttatc gatcttgatc
     1981 ggtaatatcg atgcggcgcg ttaccggaaa cgccacctgc cgcaccaacc cgattacaat
     2041 cgcatctgga gcggcgaggg tacaccggaa catgccatta tgcgagaggt tcttgaagag
     2101 atgcggcgcc gcggcgtctt cgccagcgtg gatgtgcata acaacaccgg ccgtaatccg
     2161 cattatgctt gtgttaaacg tctcgatccg cgctgcttgc agttggcgac gttattctcg
     2221 cggaccgtgg tgtatttcct gcggcctctg ggggtacaga gcatggcctt tgccagtctc
     2281 tgcccggcag tcacgatcga gtgtggtcgg cccggtgaga tctatggtgt tcaacatgcc
     2341 ttggaatacc tggaagcctg tttacatttg ctggaggttc ccacccatcc ggtggcggcg
     2401 agcgatctgg atctgtttca caccgtgggt atcgtcaagg tccccgatca cgtcagcctc
     2461 gggatcgggc agggggactg tgatcttaac ctgcatccgg agatcgaccg actcaatttt
     2521 cgtgaattgc ccgtaggcac cagcttcggc gtggtgggga atggccttgg gatgccgctg
     2581 gatatgcgca acgaggcggg agaagaggtc agcaagcgtt tttttgtgat tgaggatcat
     2641 gagctgcgga tccgt
//
LOCUS       DASQSL010001423         2214 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_160351, whole genome shotgun sequence.
ACCESSION   DASQSL010001423 DASQSL010000000
VERSION     DASQSL010001423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2214
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160351"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..943
                     /locus_tag="VE844_14625"
     CDS             <1..943
                     /locus_tag="VE844_14625"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZC02536.1"
                     /translation="YAISVQDRPAAAEMKGVDSYLIKPLDMVSLRQVFAQIMQKVARP
                     ARALLIIEHDPARRDAILAELKSEAVDLVSVASASETLAELRSRPYQGVVLDLDVPEM
                     DGIALLQDMRQDPALADIPVVAITGRSLDRKEKNRFKQLGAMVIAGEGESALNCLAAD
                     VKQFLQGLKGEKPEKAQQEQTERPELSNGLLAGKKALLVDDDIRNLFALTATLESNGI
                     VVVPVKSGKDAITRLHDTPGIDIVLMDIMMPHMDGYETMRRIRSEPQFKDLPIIALTA
                     KAMKGDREKCLEAGAPDYASKPVDMEKLLAQLGVLLT"
     gene            complement(981..>2214)
                     /locus_tag="VE844_14630"
     CDS             complement(981..>2214)
                     /locus_tag="VE844_14630"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002690823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0019538 - protein metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HZC02537.1"
                     /translation="DNRFREVVAKMIATLNEAGVIEAASYLTELPVPGRDAYWKLRQS
                     VEVAHETNYRFTLLKGKNDIPRQSLKQLALSIPAKQAVAGGNKAIREGQAIAQGVNLA
                     KDLANLPSNHCTPAYLAEQAKGLQKTYTSIKVKVLDEAQMKKLGMGALLAVARGSREP
                     PKLIILEYKGAEPNKRPIALVGKGVTFDSGGISIKLAASMDEMKFDMSGAASVLGTLA
                     ALAELALPLNVVGIIPSTENMPGGNAVKPGDIVRSLSGQTIEILNTDAEGRLILGDAL
                     TYAERYKPAVVIDIAALTGACVVALGQHASGLFSNHEPLGEALLAAGKKSGDRAWPLP
                     LWEEYQKQLDSPFADLANIGGREAGAITGACFISRFTKRFKWAHLDIAGTAYRTGNKK
                     GATGRPVPLLVQYLLDQC"
BASE COUNT          472 a          615 c          663 g          464 t
ORIGIN      
        1 ctatgccatc tcggtacagg atcgtccggc tgcggccgag atgaaagggg tggacagcta
       61 ccttatcaaa ccactcgaca tggtctccct caggcaagtg tttgcccaga tcatgcagaa
      121 ggtcgctcgt ccggctcggg cactgctgat cattgagcac gacccggcca gacgcgatgc
      181 gatccttgcc gagctcaaga gtgaagctgt cgatctggtg tcggtagcga gcgcgagcga
      241 aacgctggcg gagctgcgca gcagacctta tcaaggcgtt gtgctggatc tggatgtgcc
      301 cgagatggac gggatcgcct tgcttcagga catgcgccag gacccggccc tggccgatat
      361 cccggtcgtg gcaattacgg ggcgcagctt ggatcggaag gagaagaacc ggttcaagca
      421 attgggggcg atggtgattg ccggtgaagg cgaaagcgcg cttaattgcc tggcagcgga
      481 tgtcaagcag tttctgcaag ggttgaaggg agaaaagccc gaaaaagcgc agcaggagca
      541 gacggaacgg ccggagctct ccaacggcct gctggcgggc aaaaaagccc ttctggtcga
      601 cgacgatatc cgtaacctgt ttgccttgac tgccacgctg gaaagcaatg gcatcgttgt
      661 cgtacctgtc aaaagcggca aggacgccat cactaggctg catgacacac ccggcatcga
      721 cattgtgctg atggacatca tgatgccgca tatggacggt tacgaaacca tgcgccgcat
      781 ccgcagtgag cctcagttca aggatctacc gatcattgcg ctcactgcaa aggcgatgaa
      841 gggcgaccgc gagaagtgcc tggaggcggg cgcccccgat tatgcttcca agccggtcga
      901 tatggaaaaa ttgctggcgc aattgggggt attgctaact taaaaacagt aaagtcaatg
      961 cggatcatgc ccccaaaagc tcaacactgg tctagaagat actgcaccaa gaggggcacc
     1021 gggcgaccgg tggcgccctt tttgttgccg gtgcggtaag ccgtgccggc gatgtcgagg
     1081 tgggcccatt taaaccgctt ggtgaaccgc gagataaaac acgccccggt aatggcgccc
     1141 gcctcgcgtc cgccgatatt ggccagatcg gcaaaggggc tgtccagttg tttctggtac
     1201 tcctcccaaa gcggcagcgg ccaggcccga tcgccgctct ttttgcctgc ggcaagcaag
     1261 gcctcgccta aaggctcatg attgctgaag aggcccgagg catgctgccc cagggccact
     1321 acacaggcgc ctgtcaaggc ggcgatatcg atgaccacgg cgggcttata acgttcggca
     1381 taggttaagg catcgcccaa gattaaccgg ccttccgcat cggtattgag gatctcgatg
     1441 gtctgtccgg agaggcttct gacgatatcc ccgggtttga cggcgttgcc gcccggcatg
     1501 ttctccgtgc ttgggatgat gcctacgaca ttgagcggta gcgctaattc agccagcgca
     1561 gcgagtgtcc ccaagacgct cgctgcgccg gacatgtcaa atttcatctc gtccatggat
     1621 gcagcgagtt tgatcgagat cccaccggaa tcaaaggtaa cgcccttgcc caccagagcg
     1681 atgggtcttt tattcggttc ggcgccttta tattccagga taataagctt ggggggttca
     1741 cggctgccgc gagctaccgc caacagggcc cccatgccga gctttttcat ctgggcctcg
     1801 tcaagcacct tgaccttgat cgaggtgtag gttttttgta atcctttggc ctgttccgcg
     1861 agataggccg gggtgcagtg attgctcggc agattggcga gatccttggc aagattaacg
     1921 ccctgagcaa tagcctggcc ttcccggata gccttattgc caccggccac ggcttgtttg
     1981 gccggaatac tcaaggctaa ctgcttgagc gattgccggg ggatatcatt tttacctttc
     2041 aatagggtga agcggtagtt cgtctcatgg gccacttcga ccgactggcg cagcttccag
     2101 taagcatcgc ggccgggtac tggaagctcg gttaaatagc tcgccgcttc gatgacgccc
     2161 gcctcattca gagtagcgat catcttggcc acgacctccc gaaatctatt atcg
//
LOCUS       DASQSL010001424         1784 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_197923, whole genome shotgun sequence.
ACCESSION   DASQSL010001424 DASQSL010000000
VERSION     DASQSL010001424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197923"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..281)
                     /locus_tag="VE844_14635"
     CDS             complement(<1..281)
                     /locus_tag="VE844_14635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014577554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02538.1"
                     /translation="MFEHLRSQRIDSLNIEAQEYRHRGTGARHLHLAAEDSNNAFAVA
                     FLTLPQDSTGVAHILEHTVLCGSRRFPVRDPFFLMTRRSLNTFMNAMTA"
     gene            447..>1784
                     /locus_tag="VE844_14640"
     CDS             447..>1784
                     /locus_tag="VE844_14640"
                     /inference="COORDINATES: protein motif:HMM:NF025104.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HZC02539.1"
                     /translation="MIITNLGPRTAIILHDLIMVMLAWELAWLTRFNFSIPAWDFWLA
                     HLKALPWVVLIQGIILWRFSLYRGLWRFASLLDLWNIIRAALLGVLCITLVLFVLQRL
                     EYIPRSVLILYPVFLIFLWGAPRFVRRLWNDGSLNLKTTPNAQRVLIIGAGRAGEMVA
                     REIVRDGNFIPVGFLDDRLELTHRRIHGIPVLGAIDALSTIITRHEVELLLITIPSAT
                     NAEMQRIVEVCQQSNKPFRILPMACRVALSELRVVSIEDLLGRARVALDWQTIHRGVN
                     GKTIMVSGGGGSIGSELCNQIAKLGPAALVVFERSEHNVYTVERQLRQAYPHLSLQAV
                     LGDVCDPVAVNRSVARFKPEIIFHAAAYKHVPLLELQLREAVRNNVIGTKLLAEAAAR
                     HRCEKFVLISSDKAVNPASMMGMSKRLAEMVCTAMNQETKTRYITVRFGNVLGS"
BASE COUNT          377 a          447 c          519 g          441 t
ORIGIN      
        1 ctggcggtca tagcgttcat aaaggtattg agagaacgcc gggtcatgag aaaaaatgga
       61 tcgcgcactg gaaatctccg gctgccgcaa agcaccgtat gctccaggat atgagccaca
      121 ccggtcgaat cttgaggaag cgtgagaaag gcaactgcaa acgcgttatt gctgtcttct
      181 gcggcgagat gcagatggcg tgctcccgtg cctcgatgtc ggtactcctg ggcctcaata
      241 ttgagggaat cgatacgctg gctcctgagg tgttcgaaca taggggtaca tgagagtact
      301 ggttgaatgg agtatttatt ttagaacctc tatagcaaaa attcacatat attttgcaag
      361 ccttcagagc gtacgagaac aacgggacaa atgcacgggg tgcggctata atcgcttacg
      421 gatatagatt tcatcgacgc ttatcagtga taataacaaa cctcggtccc cggacagcca
      481 tcatcctcca tgatctgatt atggtcatgc tcgcgtggga actggcatgg ctcacccgtt
      541 ttaatttttc tatcccggcc tgggattttt ggttggctca tctcaaggcg cttccttggg
      601 tagtgcttat ccaagggata atcctctggc gcttcagttt gtatcggggt ctttggcgct
      661 ttgcgagcct gctggacctg tggaatatca tccgtgccgc cctcttgggg gtgctgtgta
      721 tcaccttagt gctgtttgtg ctccagcggc tggaatatat accgcgatcg gttttgatcc
      781 tatacccggt gttcttgatc tttctctggg gtgcgccgcg attcgttcgc cgtctgtgga
      841 acgacggctc gctgaacctc aagactaccc ctaatgccca acgcgtattg ataatcggcg
      901 ccggccgtgc gggtgagatg gtggcaagag agatcgtgcg tgatgggaac ttcatcccgg
      961 tgggtttcct ggacgatcgg ctggagctta cccacaggcg tatccatggg atcccggtcc
     1021 tcggtgccat cgatgcactc tcgacaatca ttacccgcca tgaggtcgag ctcctgctta
     1081 tcactatccc ttcggcgacc aacgctgaga tgcagcggat tgtagaggtg tgtcaacagt
     1141 ctaataagcc tttccggatc ttaccgatgg cgtgccgcgt cgctttaagt gagctgcgcg
     1201 tggtttcgat tgaggatctg ttgggacgag cgcgggtggc gctcgattgg cagacgattc
     1261 atcgaggggt aaacggcaag acgatcatgg tcagcggggg cgggggctcc atcggctcgg
     1321 aactgtgtaa tcagattgca aagctaggtc cggccgccct ggtcgtattc gaacgcagtg
     1381 aacacaatgt gtatacggta gaacggcagt tacggcaggc ttatcctcac cttagcttgc
     1441 aggccgtact gggtgatgtc tgcgatccgg tggcggtcaa tcgcagcgtg gccagattta
     1501 aaccggagat catttttcac gccgctgcct acaagcatgt gcctttgctt gaattgcagc
     1561 tacgggaagc ggtgcgcaac aatgtcatcg gcaccaagct cttggcagag gcggccgctc
     1621 ggcaccgatg cgagaaattc gtcctgatct cctcggacaa ggccgtcaat cccgccagta
     1681 tgatgggtat gagcaagcgc cttgccgaga tggtatgcac ggcgatgaat caggaaacga
     1741 agacccggta tatcaccgtg cgttttggta atgtgctggg atcc
//
LOCUS       DASQSL010001425         1188 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_133072, whole genome shotgun sequence.
ACCESSION   DASQSL010001425 DASQSL010000000
VERSION     DASQSL010001425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1188
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133072"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1147
                     /locus_tag="VE844_14645"
     CDS             <1..1147
                     /locus_tag="VE844_14645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002811327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02540.1"
                     /translation="ELPYRFNAYSTPDGVELVVGNCLTCHAAHFNGQLVIGLGNESVD
                     FTEDRSESIESSGVYVNGEAEAREWRKWADRMEAIGPYIKPDTIGLNPAINITWALFA
                     HRDPKTLQWSNKPVIEPPSKEVLPVSTPPWWRMKKKNSMFYPSGGRGDHARLMFIATS
                     LCTDTVAEATELVNRYGRDIRAYIASLKPPTYPFSIDRQLAENGRPVFEANCARCHGT
                     YGEPATYPNLTIGVEEVGTDPALAREGVNGGQDRFLEWFARSVYGKGAQLAPAPGYVA
                     PPLDGVWATSPYLHNGSVPSIAVLLDSPNRPQYWTRTFDSNDYNPETLGWNYTELSYG
                     KAGAKNKEERKRVYDTTLPGHSNQGHTFGDALNENERRALIEYLKTL"
BASE COUNT          291 a          321 c          344 g          232 t
ORIGIN      
        1 cgaactgccc taccggttca acgcgtactc gacgccagac ggcgtggaat tggtggtagg
       61 gaattgcctg acttgccacg cggcgcattt caacggtcag cttgttatcg ggttagggaa
      121 tgagtccgtc gacttcaccg aagaccgtag cgagagcatc gagagcagcg gtgtgtatgt
      181 gaatggcgaa gccgaagcaa gggaatggcg gaagtgggct gatcggatgg aagctatcgg
      241 cccctatatc aagccagaca cgattgggct gaatccggca atcaacatca cctgggcatt
      301 gttcgctcat cgcgatccca agacgctgca atggtcgaat aaaccggtga tagaaccgcc
      361 ctccaaggag gtattgccag tcagcacgcc tccgtggtgg cggatgaaaa agaaaaattc
      421 catgttctac ccgagcggtg ggcgtggcga tcatgctcgt ttgatgttta tcgcaacgag
      481 tttgtgcacg gacacagttg ctgaggcaac cgagctggtc aatcgctacg gcagggatat
      541 cagagcctac atcgcctcgc tcaaaccgcc cacctatcca ttctcgatag accgacagct
      601 tgccgagaac gggcggcctg tattcgaggc caattgcgca cgctgtcatg gaacgtacgg
      661 agaaccggct acgtatccga acctcaccat aggcgtcgaa gaggtaggga cggatccggc
      721 attggcacgt gaaggggtca atggcgggca ggacaggttc ctcgagtggt tcgcgcgctc
      781 cgtgtatggg aaaggcgcac aattagcgcc tgcgccaggc tatgtggctc ctcctctgga
      841 tggtgtatgg gcgacatcgc cctatctgca caatggctcg gttccatcga tagcggtcct
      901 gcttgatagt ccaaacagac cccaatattg gacccgcacg ttcgattcga atgactataa
      961 cccagaaacg ctcggctgga actacacgga actgtcctac ggaaaggcgg gcgcaaagaa
     1021 caaagaagaa cgcaagcgcg tttacgacac taccctacct ggacattcca accagggaca
     1081 tacgtttggg gatgcgctga acgagaatga gcggcgagcc ctcatcgaat atctgaagac
     1141 cctttaaagc gtatacccgc gacaggaccc ccttgcgcta ccattgaa
//
LOCUS       DASQSL010001426         1176 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_90730, whole genome shotgun sequence.
ACCESSION   DASQSL010001426 DASQSL010000000
VERSION     DASQSL010001426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1176
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90730"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(189..1118)
                     /locus_tag="VE844_14650"
     CDS             complement(189..1118)
                     /locus_tag="VE844_14650"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015152406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HZC02541.1"
                     /translation="MKAVRIHTYGGPEVLKYEEAPRPKPGAGELLIRVHAAGVNPVDW
                     KIREGYFKQRLNYSLPLILGWDLSGVVEARGPGIVRLKAGDEVYSRPDIARDGAYAEY
                     IVVRESEVALKPRSIDHTHAAAIPLAALTAWQSLFDTAGLGAGQKVLIHAAAGGVGSF
                     AVQLAKWKGAYVIGTASKRNQDFVRELGADQTIDYQTTHFEDVVHDVDVVFDTIGGDT
                     QRRSWKVLKKGGILVSIVGPPSAEEAAAHGVRQASVFVQPSATQLTELANLVDSGKLK
                     PVVETVLPLSEARRAHELSQTGHMRGKIVLRVL"
BASE COUNT          236 a          365 c          311 g          264 t
ORIGIN      
        1 acgcgcgcag ccgggaagga atgccagcgc tgccgtgagc aagagagcga gcagcccgat
       61 cccatgcacc tgattgccta tctgcaagag aagttcggtg accactttac cgatatggcc
      121 cgttgctccc atgactgcat agctgtgtct tgtctgtgtc atcgatgttc tcctttcctc
      181 attgatagct acaaaacacg gaggacgatc ttgccgcgca tgtggcctgt ctgactgagt
      241 tcgtgggcac ggcgcgcttc cgacagcggc agaacggttt cgacaacggg cttgagcttt
      301 cccgaatcga ccaggtttgc aagctcagtt agctgcgtgg ctgacggttg gacgaagaca
      361 gatgcctggc gcacgccatg cgcggcggct tcctctgccg agggagggcc aacgattgaa
      421 accaggatcc cacccttttt tagcaccttc caggagcgcc tctgagtatc tcctccgatc
      481 gtgtcgaaga ctacatcaac atcatggacc acgtcttcga agtgcgtggt ctgatagtcg
      541 atcgtttggt cggctcccag ctccctcacg aagtcctgat tgcgtttaga cgcggtgcca
      601 atcacatacg cacccttcca cttcgcaagc tgcaccgcaa agctcccgac gccgccagcg
      661 gcagcgtgga tcaatacctt ctgacccgca ccaagtccgg ccgtatcgaa aagcgattgc
      721 cacgccgtca gcgccgcaag aggaatggcc gcggcatggg tgtggtcaat ggaccttggc
      781 ttgagcgcga cttccgactc ccggacgacg atgtattcgg cataggcccc atcccgagca
      841 atgtccgggc ggctgtagac ctcatcgccc gccttcaatc ggacgatgcc cggacctcgg
      901 gcctcaacaa cgcccgaaag gtcccacccc agtatcaagg gcagcgaata attcagcctc
      961 tgtttgaaat atccctcccg aatcttccag tccactggat ttacgccagc agcatggacc
     1021 cgaatcaaga gttcaccggc ccccggcttc gggcgcgggg cctcctcgta cttgagtacc
     1081 tctgggccac catacgtatg aattcgcact gctttcattg tttccattga aatctccttt
     1141 tgtggtttct caaggttttc attcttgcgg tttttg
//
LOCUS       DASQSL010001427         1163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_64778, whole genome shotgun sequence.
ACCESSION   DASQSL010001427 DASQSL010000000
VERSION     DASQSL010001427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64778"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..753)
                     /locus_tag="VE844_14655"
     CDS             complement(<1..753)
                     /locus_tag="VE844_14655"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003613263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HZC02542.1"
                     /translation="MADAALRTPSTEGAEAAAAAAYAQEILDLLFGLLGDVIQLRQPE
                     IEPVLRGAIGIPQGRHDLLLKTLQAWGIGFQLTTIAEQNATMRRLRQTERSRGADKVE
                     GTFAYVLAEAAAVGVKPEAIQALLQQARIWPVITAHPTEAKRVTVLEIHRRIYLLLVE
                     LESARWTPREREMRLDNLRNAIDLLWLTGELRLEKPTVAQEVAWGLHFFEEALFERVP
                     ELLEKLHWALAQAYPDQAFNIPPFFQFGSWIGG"
     gene            complement(762..>1163)
                     /locus_tag="VE844_14660"
     CDS             complement(762..>1163)
                     /locus_tag="VE844_14660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018992531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HZC02543.1"
                     /translation="LGAEQCATVEELLERSDFVSLHCPGGKETRHLINTERLARMKPH
                     ALLINTARGDVVDEEALVAALKNGTIAGAGLDVYEAEPKVTETLLALENVVLLPHLGS
                     ATRETRVAMGMRVVENIEAFFAGKPPRDRVI"
BASE COUNT          227 a          370 c          337 g          229 t
ORIGIN      
        1 gcccccgatc caggacccaa attggaagaa cggcgggata ttaaacgcct ggtctgggta
       61 agcttgggca agcgcccagt ggagcttctc caggagttcg gggacccgct cgaataaagc
      121 ctcttcgaag aaatgcagtc cccaggccac ctcctgggct acggttggct tttctaagcg
      181 cagctcaccc gtcagccata agagatcgat cgcattacgc agattatcga ggcgcatctc
      241 acgctctctt ggggtccagc gggctgattc caattccacg agcaagagat agatacggcg
      301 gtggatctcg agcaccgtga ctcgcttcgc ctcggtggga tgggcagtga tgaccggcca
      361 gatccgcgcc tgctggagca gcgcttggat cgcttcgggt ttcaccccga ccgccgccgc
      421 ctcggccaac acataggcaa aggtcccttc gaccttatca gctccacggc ttctctcggt
      481 ctgccgcaag cggcgcatgg tggcattctg ctcggcaatg gtcgtgagct gaaacccgat
      541 cccccaggcc tggagggtct tcaacagaag atcatggcgg ccttggggga tcccgatcgc
      601 cccacgcagc accggctcaa tctcgggctg gcgcagttgg atcacatcac ccaagagtcc
      661 aaagagaaga tccaggatct cctgggcata cgcggccgct gctgctgctt cggccccttc
      721 ggttgaggga gttctcaggg ccgcatccgc catatttggt gttagatcac gcgatcgcgc
      781 ggtggcttgc ccgcaaaaaa ggcctcgata ttctccacga cccgcatccc catggccact
      841 cgggtctcgc gggtggcact gccgagatgc ggcaacagca cgacgttttc cagggccagg
      901 agtgtttctg tgaccttggg ctcggcctca tagacatcaa gacctgcccc ggcaatcgtg
      961 ccgttcttca aggcagccac cagggcctct tcatccacca catccccgcg ggccgtattg
     1021 atcagcaagg catggggttt catccgggcg agccgctcgg tattgatgag atggcgcgtc
     1081 tccttgccgc ctggacagtg caacgacaca aagtcggagc gttcgagcag ctcttcaacg
     1141 gtagcacatt gctccgcgcc caa
//
LOCUS       DASQSL010001428         1080 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_34877, whole genome shotgun sequence.
ACCESSION   DASQSL010001428 DASQSL010000000
VERSION     DASQSL010001428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34877"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..926
                     /locus_tag="VE844_14665"
     rRNA            <1..926
                     /locus_tag="VE844_14665"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          251 a          271 c          354 g          204 t
ORIGIN      
        1 cgtaacgatc tgggcgctgt ctcaacgagg gatccggcga aattgaagta cctgtgaaga
       61 tgcaggttac ccgcgatagg gcaaaaagac cccgtggagc tttactgcac cttgtcattg
      121 gatcggtgtt ctgcatgtgt aggataggtg ggaggctgag aagctggggc gctagcctcg
      181 gtggagccaa cgttgaaata ccacccttgt tggatttcgg ttctaaccgc gacccgtaat
      241 ccgggcgcgg aacagtggca ggcaggcagt ttgactgggg cggtcgcctc ctaaaatgta
      301 acggaggcgc ccaacggttc cctcaggctg aatggaaacc agccgaagag tgcaaaggca
      361 taagggagct tgactgcgag acccacaagt cgagcagaga cgaaagtcgg gcttagtgat
      421 ctggtacctc cgagtggaag gggtatcact caacggataa aagctacccc ggggataaca
      481 ggctgatggt gcccaagagt tcacatcgac ggcaccgttt ggcacctcga tgtcggctcg
      541 tcgcatcctg gggcggaagt acgtcccaag ggttgggctg ttcgcccatt aaagcggtac
      601 gcgagctggg ttcagaacgt cgtgagacag ttcggtctct atccagcgtg ggcgtaggga
      661 acttgagagg agctgctcct agtacgagag gaccggagtg gacgaaccgc tggtgtgcca
      721 gttgtcctgc caagggcatc gctgggtagc tatgttcggt tgggataagc actgaaagca
      781 tctaagtgcg aagctcgcct cgagatgagg tttcccaccg ggtcaaccgg gtaagaccgc
      841 agggagacca cctgttcgat aggccgcacg tggaagtccg gtgacggatg aagctgagcg
      901 gtactaatgg tcgagggctt gacctcttca gcagctgacc aggggtcaga aggctggaga
      961 tcgagatcgg tccaaaccga cgcgaagatc gaagactcaa tttttcggcg ccccgcgccc
     1021 ggatccatac gggccgcgcc ggcgcgctgc cgaagcagat tcagaacaaa cggacgaaat
//
LOCUS       DASQSL010001429         1132 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_189148, whole genome shotgun sequence.
ACCESSION   DASQSL010001429 DASQSL010000000
VERSION     DASQSL010001429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189148"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(737..>1132)
                     /locus_tag="VE844_14670"
     CDS             complement(737..>1132)
                     /locus_tag="VE844_14670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HZC02544.1"
                     /translation="IVERLKREHRVVAMAGDGVNDAPALAAADVGIAMGTGTDVAIES
                     AAVTLIKGDLVGIVRAVRLSRATIKNIRENLFFAFVYNAAGVPIAAGVLYPFFGLLLS
                     PIFAAAAMSLSSVSVIGNALRLRAVRLEN"
BASE COUNT          230 a          315 c          342 g          245 t
ORIGIN      
        1 cccgatgacg accttccgcc cgcgctacgg ggcggcagcc ccgttaacaa ggccgtggtc
       61 gttcgggtct aggcgacagg tattggaggg ggacggaagt ttcgcgaggt gtgatgctgg
      121 aggctgcctt caggcggact gtaggcgaat atcgccgaag acagagtcaa cgagactgcc
      181 tgctcaacta cgccggcgtg gaaatacatg cactccgagc aggtggcatc acaggtacta
      241 ttgcaactgc actcggggtc cggtgcaacc gcggtctcgt cgggctgctc tccaaggggt
      301 ttggaacaag ggtgagagtg tttggcgggc gcgcagcagt cggccgggca ggactgatac
      361 ataatcccac caaaacctgg ggaccatgcg gtcaccagcg cgaccaacac cagactacag
      421 atgattgcgt gcaaccttgc cattctcttg ggttagagaa ctctctccgt ggttagttca
      481 gggtggtttg gccgtcttac ggctatgcta tccctggcgt ctggcgactg caacggctgc
      541 accatgcatc gcgaaacgcc ctgggtggtg aaatgaaccc ggacaaagtt atggaggatt
      601 cagtagacat cgaggtttgg ctttaggcgc tgtttctttt tggcgtaggt agtggtcttt
      661 ctgcgatagg ccgcacacca tctgcgcagg attgcagtct gatccctatt tttctcgcat
      721 ttttctcgta atgtcgtcaa ttttccaggc gtaccgcccg caatcgaaga gcattgccga
      781 ttaccgatac cgagctcaag ctcatcgcgg cggcggcaaa gatcggcgac agcagcaagc
      841 cgaagaacgg atacaacacg cctgctgcaa tgggtacgcc tgccgcgttg tagacgaatg
      901 cgaagaacaa attctcgcgg atgtttttga ttgtggcgcg gctcaggcgt acagcccgga
      961 caatgccgac gagatcgcct ttgatcaagg tcactgctgc gctttcgatt gccacgtcgg
     1021 ttccggtgcc catggcgatg cccacatccg ccgcagcgag ggcaggagcg tcgttcacac
     1081 cgtctcctgc catcgccacc acgcggtgtt cgcgtttcaa gcgttcgacg at
//
LOCUS       DASQSL010001430         1138 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_160374, whole genome shotgun sequence.
ACCESSION   DASQSL010001430 DASQSL010000000
VERSION     DASQSL010001430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1138
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160374"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..220)
                     /locus_tag="VE844_14675"
     CDS             complement(<1..220)
                     /locus_tag="VE844_14675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014096762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02545.1"
                     /translation="MEILAFIPPMLALLQGSSQLYLVGFGFASGTAVIGSGIGMGYLF
                     GQTIASIHRQPEAFELSRTWLFVGIGLVE"
     gene            complement(266..1057)
                     /gene="atpB"
                     /locus_tag="VE844_14680"
     CDS             complement(266..1057)
                     /gene="atpB"
                     /locus_tag="VE844_14680"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HZC02546.1"
                     /translation="MLTLALLQVQGAELRKEIIHAWESGQHAIVHLSLFGIDISITKA
                     VLFLWIGAALTFLIMFIAARSLKDRPGAYQVIVEEIYGFGRNSMGGQLGEEGRKWFPY
                     TLSLFIFLLVLNLVGLVPNSFPVTSSISFTLVLALLTFVITQVVGIRRNGLGGYVKAF
                     VPPGMPAKPIMVPFMFFIEWVSELSKPLTLAMRLYANILAGHLLIFIFLGFILYTGTP
                     LMATISVPVAVVLYGFEIFVAVLQAYIFAILTQVYIEIALYRQEH"
BASE COUNT          269 a          358 c          307 g          204 t
ORIGIN      
        1 cttcgaccaa cccgatgccg acgaaaagcc acgtcctaga gagctcgaag gcttctggct
       61 ggcgatggat cgacgcgatc gtctgcccga acaggtaccc catcccgatc cccgacccga
      121 tgaccgccgt tccggacgcg aacccgaacc cgacgaggta gagctggctg ctcccctgaa
      181 gtagcgccag catcggtggg atgaatgcca atatctccat gtacgttgct cctctctgtt
      241 ttccgcctct tacccggcag gagccctagt gctcttgccg gtagagggct atctcgatgt
      301 aaacctgcgt aagaatagcg aatatgtatg cttgcaacac ggccacgaag atctcgaacc
      361 catacaacac gaccgccaca ggaaccgata tggttgccat caagggcgtc cctgtgtaca
      421 ggataaagcc gaggaagata aagattagca agtgccccgc cagtatgttg gcgtagagcc
      481 gcatagcgag cgtgagcggc ttgctcagct ccgacaccca ctcgataaag aacatgaaag
      541 ggaccatgat cggcttggcc ggcattccag gcggcacgaa cgccttgacg tatcctccca
      601 gaccgttgcg ccggataccc acgacctggg tgatgacgaa cgtcaacagg gccagcacca
      661 gggtgaacga gatgctgctg gtgactggga agctgttggg cacgagcccg accaggttca
      721 aaaccagcaa gaagatgaac aggctcaggg tgtatgggaa ccacttcctc ccttcctcgc
      781 ccaactggcc gcccatgctg ttacgtccga agccgtagat ctcctccacg atcacctggt
      841 aagcaccggg acgatccttc aaagacctgg cggcgatgaa catgatcagg aacgtaaggg
      901 cagccccgat ccacagaaac aggacggctt tggttatgga gatgtctatg ccgaagagtg
      961 acaggtgtac gatagcgtgc tgtcctgact cccaggcgtg gatgatctcc ttccgaagct
     1021 ccgcaccctg cacctgcaac aacgcgagcg tcagcaatgc cctacccccc gttcctatcc
     1081 cctacgcccg ccctgcggcc gtaagtgccc cggaccttta cagccccgaa caagagca
//
LOCUS       DASQSL010001431         1212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_189177, whole genome shotgun sequence.
ACCESSION   DASQSL010001431 DASQSL010000000
VERSION     DASQSL010001431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1212
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189177"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            217..597
                     /locus_tag="VE844_14685"
     CDS             217..597
                     /locus_tag="VE844_14685"
                     /inference="COORDINATES: protein motif:HMM:NF013842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02547.1"
                     /translation="MSGYSEDLRERIVSSVEGGGMSKAQAARTFSVSLSSVKRYVGKA
                     KRGESLAPKKRPGSTPKLDEKARSLLAADLKERPYLTLQERCDYIEAMTELSVSRSTM
                     CRAIARIGSTRKKGGEQPQSATSS"
     gene            615..1166
                     /locus_tag="VE844_14690"
     CDS             615..1166
                     /locus_tag="VE844_14690"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC02548.1"
                     /translation="MVAAVVKPERLIFVDECGTHTSLAPIYGYAPRGERLYLSVPRNR
                     GKNTTLLSSISLEGVGPSLAVEGSTTARVFETYVEKVLAPSLKESQIVVMDNLSAHKP
                     KRIRELIEQRGCELVYLPSYSPDYNPIEEAFAKIKNLLRKAAARSKEALIEAIAAALS
                     AITAEDIRGYFQHAGYRLAGQLL"
BASE COUNT          305 a          322 c          369 g          216 t
ORIGIN      
        1 ttagaggagg atgccgcagg ggatgtagaa agcggaaaca gcgggcctgg aagcgacaat
       61 agcgggcacg gaagtagcgg gggcggttaa gactgatctc gaggacgagc ctcgagaatt
      121 cacgagtgcg atcaacatag catgaggctc gtgggcagca gcgttcgccc cctacagcac
      181 attgcagcgg tagtgaaccg atgagaacat ggccccatga gcggttactc agaagacctc
      241 agagaaagga tagtctcctc ggtagaagga ggcggcatgt ccaaggccca ggcggctcgc
      301 accttctccg tctcgctctc ctcagtcaaa cgttacgtag gcaaggccaa aaggggagaa
      361 tcgctggctc cgaagaagag gcccggatct actcccaagc tagacgaaaa ggcgaggagc
      421 ctccttgccg ccgatcttaa ggaacgtccc tacctcaccc ttcaggagcg ctgtgactac
      481 atagaggcta tgacggaact ctctgtgagc cgctccacga tgtgtcgagc catagcgagg
      541 atcggctcca ccaggaaaaa ggggggcgag cagccacaga gcgcgacgag ttcttgaggg
      601 cagcctggca ggtgatggtg gctgcggtgg tgaagccaga gaggctaatc tttgtggacg
      661 agtgcgggac tcatacctcc ttggcaccaa tctacggcta cgcaccaaga ggcgagcgtt
      721 tgtatctgtc ggtacccaga aaccggggca agaacacaac gctgctttcg agcataagcc
      781 tggagggggt gggaccgtcc ttagcggtgg aagggtcgac cacagcccga gtcttcgaga
      841 cctacgtaga gaaagtgctg gctccgagcc tcaaagaaag ccagattgtg gtgatggaca
      901 acctctcagc ccacaagcca aaacgcatca gggagttgat cgagcagagg ggatgcgagc
      961 tggtatatct gccgtcctac tccccggact acaaccccat tgaggaagct tttgccaaga
     1021 tcaagaacct gctgcgcaag gcagcagcca ggagcaaaga ggctctgata gaagctatag
     1081 cagcggcgct atctgcgatc actgccgaag acatccgagg ttactttcaa catgcgggat
     1141 accgtcttgc aggtcaatta ctgtgaaacg tgctgtatgc ctctcactcg ctgctttcta
     1201 cgaacttccg ag
//
LOCUS       DASQSL010001432         1715 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_189222, whole genome shotgun sequence.
ACCESSION   DASQSL010001432 DASQSL010000000
VERSION     DASQSL010001432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189222"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..756)
                     /locus_tag="VE844_14695"
     CDS             complement(<1..756)
                     /locus_tag="VE844_14695"
                     /inference="COORDINATES: protein motif:HMM:NF012892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporting ATPase C-terminal
                     domain-containing protein"
                     /protein_id="HZC02549.1"
                     /translation="MGQRGAEVVRKSAEIIITDDNFASIVTGVEEGRAACANVRKVIF
                     LSISTGIAQIILFLSALLAGIPLPLLPVQLLWLNLVTNGIQDVALAFEPAEGDELKRP
                     PRPPNEPLFDYSMIARVGISALVMGLVAFWIFQDRVADGYTLEAARNSTLLLMVLFEN
                     LQVFNSRSEWRSVFLHNPLRNPVLLLGILATLTLHIGAMYTPPLQEILQLQPLPLTEW
                     LRLSGYALGILATMEIYKALGWWTQGYRRSISIN"
     gene            928..1608
                     /locus_tag="VE844_14700"
     CDS             928..1608
                     /locus_tag="VE844_14700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020160049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
                     /protein_id="HZC02550.1"
                     /translation="MIDFKGHRVEKDIILLCVRWYLAYPLSYRNLEEMMEERGVQVDH
                     SNIYRWVQKFTPHLEAAFRNGKKRPLGSGWRMDETYIKVKGQWKYLYRAVDREGQTID
                     FLLTAHRDKKAALRFLKKAVRHHDLPEKITIDQSGANTAAIEALVEETGQKIEIRQNK
                     YLNNLVEQDHRAVKRIVRPMLGFKSFRSASLTLRGIELMHMLKKGQLIAGNSPNLSAA
                     GQFYSLAA"
BASE COUNT          427 a          472 c          475 g          341 t
ORIGIN      
        1 attgattgat atagaccgcc tgtagccttg cgtccaccac ccaagcgcct tatagatctc
       61 catagttgcc aggatcccaa gcgcatagcc cgaaagcctg agccattcgg taagtgggag
      121 cggctgcagc tgcaggatct cctgcagggg aggcgtatac atcgcaccga tatggagggt
      181 tagggtcgcg aggatgccga gcaacaacac tggattacgc agtgggttat gcagaaacac
      241 tgagcgccac tcggagcggc tattgaacac ctgcaggttt tcaaacaaca ccatcaataa
      301 caaggtgctg ttgcgggcgg cctcaagcgt gtagccgtcg gccactcgat cttgaaagat
      361 ccaaaaggcc acaagcccca tcaccagcgc cgagatccct acacgcgcga tcatggaata
      421 atcgaacaga ggctcgttag gcggccgcgg cgggcgcttt aattcatccc cctcagcagg
      481 ctcaaaggcc agcgctacat cctgaatgcc gttggtaacc agattgagcc agagcagctg
      541 gaccggcagg aggggcaagg gaataccggc aagcagggcg gacaggaaga ggatgatctg
      601 cgcgatcccg gtcgagatcg ataggaatat caccttgcgc acattggcac aggcggcccg
      661 gccctcttcg acgccggtga cgatcgaggc aaaattatca tcggtaatga tgatctcggc
      721 gctcttccgg accacctccg ccccgcgttg ccccatcgcc acgcctacat ggacggcttt
      781 gagagcgggt gcgtcgttgg cgccatctcg aggttaggga gcagcgcacg gcactcgatt
      841 gggctcatca agggttctgt tgcgttagtt caatgtgtgc cggttggggt atgctacacg
      901 catagaactt ttccccgaaa gccaaccatg atcgacttca aaggacaccg cgtagaaaaa
      961 gacatcatcc tactctgtgt gcgctggtat ctggcctatc cactcagcta tcggaacctg
     1021 gaagaaatga tggaagagcg cggcgtccag gtcgatcatt cgaacatcta ccgctgggtc
     1081 cagaagttta cgccgcacct ggaggctgcc tttcggaacg gcaagaagcg ccccctgggc
     1141 agcggttggc ggatggacga aacctatatc aaggtcaaag gtcagtggaa gtacctgtat
     1201 cgggctgtcg acagagaggg tcagaccatt gacttcctgc tcaccgcgca tcgggacaag
     1261 aaagccgcgc tgcgcttcct gaagaaagcg gtccgacatc acgatcttcc ggaaaaaatc
     1321 accattgatc aaagcggggc caataccgcc gccatcgaag cgctcgtcga agaaaccggt
     1381 caaaaaatcg agatccgtca gaataagtat ctgaataacc ttgttgagca ggatcaccgg
     1441 gccgtcaaac ggattgtccg accgatgctc ggattcaaat cgttccgttc agccagcctc
     1501 actttgcgtg gaattgaact catgcacatg ctcaagaaag gtcagctgat tgctggcaac
     1561 agtcccaatc tatccgctgc tggacaattt tattcattgg cagcctaatt gtatctgcca
     1621 atagcaggat tatgtgcagc ggtaattaac gcaacagaac ccatcgaact gcgcgtgacc
     1681 ggtttgtttc aatccagcgc gtgaaaatta gcggg
//
LOCUS       DASQSL010001433         2430 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_78354, whole genome shotgun sequence.
ACCESSION   DASQSL010001433 DASQSL010000000
VERSION     DASQSL010001433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2430
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78354"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..831)
                     /locus_tag="VE844_14705"
     CDS             complement(<1..831)
                     /locus_tag="VE844_14705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007191491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HZC02551.1"
                     /translation="MIRFTIAALLITSLTACQYLADLRSREADELSQPSEVLPPAVRA
                     QIFPLREDSDLVGQVQIVTTRYEDTLFDLARKFDLGIKELAQANPGVDKWVPGEGSRV
                     ILPTQFILPDAPRKGIVLNLAAMRLFYYPKPKLGETPVVITHPIGIGRENWSTPIGLT
                     KVVKKVANPSWIIPASIRKEHAAIGDPLPAVVPPSPDNPLGTHALRLGLSSYLIHGTN
                     KPEGIGMRVSHGCIQLYPEDIETLFHQVPVGTQVRIINHPYLAGWQDGMLYLQAHKPL
                     E"
     gene            complement(865..1965)
                     /gene="aroC"
                     /locus_tag="VE844_14710"
     CDS             complement(865..1965)
                     /gene="aroC"
                     /locus_tag="VE844_14710"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012487563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HZC02552.1"
                     /translation="MSGNTFGTLFTVTTFGESHGPAYGCIVDGCPPGLELAEDDLQRD
                     LDRRKPGTSRHTTQRREADIVKILSGVFEGRTTGTPIGLLIENTDPRSKDYAKIMDRF
                     RPGHADYTYQQKYGIRDYRGGGRASARETCMRVAAAGIAKKYLRERYGILIRGYLAQL
                     GPISVTPRDWNEVDNNSFFCPDPTQVQELEHYMDTLRKEGDSIGARINVIASGVPPGL
                     GEPIFDRLDADIAKAMMGINAVKGVEIGAGFACVTQKGTEHRDEITPEGFLSNNAGGI
                     LGGISSGQEIVVSIALKPTSSIRLPGRTVNIHGEPIEIVTHGRHDPCVGIRATPIAEA
                     MLALVLMDHVLRHRGQNLGVRSQTPIIPAKPE"
     gene            complement(1981..2428)
                     /locus_tag="VE844_14715"
                     /pseudo
     CDS             complement(1981..2428)
                     /locus_tag="VE844_14715"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
BASE COUNT          535 a          664 c          694 g          537 t
ORIGIN      
        1 ttccaaaggc ttatgcgcct gtagatagag cattccgtcc tgccagccgg cgagataagg
       61 atgattgata atgcgtactt gggtgcctac gggcacctga tgaaagaggg tttcaatgtc
      121 ttcaggatac agctggatac aaccgtgact cacccgcatg ccgataccct ccggtttatt
      181 ggttccgtgg atcagatagg aagataagcc gagccgcagc gcatgcgtac cgagcggatt
      241 atcggggctc ggcggtacca cggctggtaa gggatcgcct atcgcggcgt gttctttgcg
      301 gatagaggcg gggataatcc aggagggatt ggcaaccttt ttaacgacct tggtaagacc
      361 gataggcgta gaccaattct cccgcccgat cccaatcgga tgggtgataa ctaccggcgt
      421 ctcgcccagc ttgggtttgg gataataaaa gagccgcatg gcggcgagat tgagcacgat
      481 gcctttacgc ggcgcatcgg gcaatatgaa ttgggtgggg aggatcaccc ggctgccttc
      541 gcctgggacc catttatcca cccctggatt cgcctgagca agctccttga tcccaagatc
      601 aaacttacgc gcgaggtcaa aaagtgtgtc ttcgtaacgt gtagttacta tctgcacctg
      661 gccgacgaga tcagaatcct cccgcagtgg gaagatctgg gctcgaaccg ctggcgggag
      721 aacctcgcta ggctggctga gctcatcagc ctccctcgat cgcagatcag ctagatattg
      781 gcaggccgtg aggctggtga taagtagagc ggcaatcgta aagcggatca ataaaaacct
      841 cctcgactag atttttagtt acattcattc aggctttgcc gggatgatcg gggtttggga
      901 tcgtaccccc agattctgcc cccgatgcct cagcacatgg tccatcaata ccagggcgag
      961 cattgcctca gcgatggggg tcgcgcggat cccaacacaa ggatcatggc ggccatgggt
     1021 cacgatctcg atcggctcac cgtggatgtt gactgttcgt ccaggcaggc gaatactgga
     1081 ggtaggtttc agcgcgatac tgaccacgat ttcttgtcct gaggagatcc ctccgagaat
     1141 accgcccgcg ttattgctta aaaacccctc tggcgtgatc tcatcgcggt gctcggttcc
     1201 tttttgggtc acgcatgcaa atcccgctcc gatctccaca cccttgaccg cattgatacc
     1261 catcatcgct ttggcgatat cggcatcgag tctatcgaag atgggctcgc caagccccgg
     1321 cggcacaccg ctcgcaatca cattaatgcg cgcgccgatc gagtcgcctt ccttgcgcag
     1381 tgtgtccatg tagtgctcca attcctggac ctgggtagga tcgggacaaa agaaggaatt
     1441 attgtctact tcattccaat cccgaggtgt aacagaaatg ggacccagtt gagccaggta
     1501 accccggata aggatcccat agcgttcccg gaggtacttt ttggcgatcc ctgcagccgc
     1561 cacccgcatg caggtctccc gcgccgaagc ccgtccaccg cctcggtaat cgcggatgcc
     1621 gtatttttgc tgataggtat aatcggcatg cccgggccgg aaccggtcca tgatcttggc
     1681 gtaatctttg gaccgcgggt cggtgttctc gatcaaaaga ccgatcgggg tgccggtggt
     1741 gcgtccctcg aacacaccgg agaggatctt gacgatatcg gcctcgcggc gttgggtcgt
     1801 atgccgggag gtgccgggtt tacgccggtc gagatctcgc tgcagatcgt cttccgctag
     1861 ttctaaacct ggaggacaac catcgacgat acagccatag gcgggcccat ggctttcacc
     1921 aaaggtagtg acggtaaata aggttccaaa ggtattgcct gacataggcg ttattctttc
     1981 ttaatcgaac aatctggcgt cgagagggag gttgatgccc tcatagcgcg agcacgagta
     2041 ggcagtaggc ccgactacct tcatccacat cctatcctga gcccgcaatg taatcgatgg
     2101 gaagggtgta gcggggtatt gagactgcca tgtgaagcgg aaccgctgcg caatcgtggc
     2161 caggagaagc atcacttcca tcatcgcaaa ccgatggcca atgcagattc gaggaccacc
     2221 gccaaaggga agataaacat acctgggtag gcgtgtttca agctcagctg cccatcgttc
     2281 cggcctgaac tcctgcggct cttcaaagta gcggggatcg cgctgcagta cccagggact
     2341 gatgaatagg gtggccccgg ctgggataga gccgcaagct ttctttgatg atcatctcgg
     2401 tgtaaggcaa ccggctcaga tcatccaccg
//
LOCUS       DASQSL010001434         1537 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_160413, whole genome shotgun sequence.
ACCESSION   DASQSL010001434 DASQSL010000000
VERSION     DASQSL010001434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1537
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160413"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            91..>1537
                     /gene="lptD"
                     /locus_tag="VE844_14720"
     CDS             91..>1537
                     /gene="lptD"
                     /locus_tag="VE844_14720"
                     /inference="COORDINATES: protein motif:HMM:NF016348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0010033 - response to organic substance
                     [Evidence IEA];
                     GO_process: GO:0061024 - membrane organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HZC02553.1"
                     /translation="MCKPDPALPQRPEIGDRAYQPGYLYMEADEAEAIEDRGATLRGG
                     VELIRDQQALRTDVLIYDKPKNTVNIQGNAQFWDKAVFLSGPRGLWDLGNNIAQFEGG
                     EYRLLERRGRGKAGIIKAFSAEDLTRLEEVDYTTCDEEPTVWTLAAKYLKLDHAEEWG
                     QATHITLRVKDIPVLYWPYLSFPLSDKRKSGFLAPKIGYSSKSGADVSLPYYWNIAPE
                     YDATLIPRFLSKRGVMLGGEFRYLLRSGGGQLNLEYLPSDNASEDNDDRSLFALNHQQ
                     GFAEGRGYVYLTYARASDNRYLEDFGTSLSLTSQIFLEQRADIAYGGSFWNLLGRVQG
                     YQSMDPLLADINKPYDRLPQIVFHAYLPGGLRGLHLQFQAETVNFDRDAGPIGGRIDL
                     KPSVSFPVYTRAAFLVPKLSLRHTQYLLDNTSPEEISRTVPIFSLDSGLFMERDFELG
                     GAAYLQTLEPRLFYLYIPDRDQNAIPVFDTNR"
BASE COUNT          332 a          449 c          426 g          330 t
ORIGIN      
        1 aagacaaccc gactattact gttttttagc cttttcatcc ctttgcgagc agctttccca
       61 gaattgctcc cggaaagtag gagtttggcc ttgtgcaaac ccgatccggc actgccccaa
      121 cgcccggaga tcggcgatcg agcttaccaa ccgggctatc tctatatgga agctgacgag
      181 gctgaagcca tcgaggatag gggagcgacc ttgcgcggcg gagtcgagct tatccgggac
      241 caacaggcct tacgcaccga tgtgctcatc tatgataagc cgaagaacac cgtgaacatt
      301 caaggaaacg cgcagttctg ggataaagcc gtattcttgt cgggaccgcg cggcttgtgg
      361 gatctcggca acaacatagc ccagttcgaa gggggggaat atcgactttt agagcggcgc
      421 gggcgcggta aggcagggat catcaaggca tttagcgcgg aagacctcac ccgccttgag
      481 gaggtcgact ataccacctg tgacgaagaa cccaccgtct ggacattggc cgccaaatac
      541 ttgaagctcg accacgcaga agagtggggg caggccaccc acatcaccct gcgggtcaag
      601 gatatcccgg tgctctattg gccctatctc agcttcccct tgagcgataa gcgcaagtca
      661 gggttcttgg cgcccaagat cggctacagc tcgaaatccg gcgccgatgt aagcctcccc
      721 tattactgga atatcgcccc cgaatacgat gcgaccctga tcccgcgttt cttgagcaag
      781 cgtggggtga tgctcggtgg agagttccgc tatctgctcc gatccggcgg gggccaattg
      841 aatctcgagt acctgccgag cgacaacgcc tccgaggata atgacgatcg atccctgttt
      901 gcgctcaatc atcaacaggg ctttgcagaa ggacgcggct atgtctatct gacctacgcg
      961 cgcgcctcgg ataaccgcta tctggaggat ttcggcacca gtttgagcct gaccagccag
     1021 atcttcttgg agcaacgggc ggatattgct tacgggggca gtttttggaa cctattgggc
     1081 agggtgcagg gctatcagtc gatggacccg ctccttgccg atataaataa accgtatgat
     1141 cggctgccgc agatcgtttt tcatgcctat ctcccgggcg ggctccgtgg gctgcacctg
     1201 caattccagg ccgagacggt caactttgac cgggacgccg gccccatcgg cgggcgtatc
     1261 gacctaaagc cgagcgtgag tttcccggtc tacacccgtg cggccttcct ggtccctaag
     1321 ctcagcctgc gccatacgca ataccttctc gacaacacca gtcccgagga gataagccgg
     1381 accgtaccca tcttcagctt agatagcggc ctatttatgg agcgcgattt tgagcttggt
     1441 ggggccgctt atctgcagac cttggaaccc cggctgttct atctgtatat ccccgaccgc
     1501 gatcaaaacg ctatcccggt gtttgatacc aaccgat
//
LOCUS       DASQSL010001435         3035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_147434, whole genome shotgun sequence.
ACCESSION   DASQSL010001435 DASQSL010000000
VERSION     DASQSL010001435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3035
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147434"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            155..937
                     /gene="amrB"
                     /locus_tag="VE844_14725"
     CDS             155..937
                     /gene="amrB"
                     /locus_tag="VE844_14725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007195045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AmmeMemoRadiSam system protein B"
                     /protein_id="HZC02554.1"
                     /translation="MSRTRFPAVAGYFYPEVADELRRAVVNYLDQAERRLSVPKALIA
                     PHAGYIYSGAVAASAYACIAPAHATITRVIVLGPAHRVYLRGLALCSAESFTTPLGRI
                     PVDQEAIEHIRDLPQIVTMDRAHALEHSLEVQLPFLQMVLDQFSLVPLVVGDASPEAV
                     SEVLVCLWGGRETLIVVSSDLSHYYDYDTAKALDQETSRNIEALRSDISPERACGCMP
                     LNGLLYLAKQQGFQVTTLDLRNSGDTAGPRDQVVGYGAYAIH"
     gene            924..1505
                     /gene="amrA"
                     /locus_tag="VE844_14730"
     CDS             924..1505
                     /gene="amrA"
                     /locus_tag="VE844_14730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013819522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AmmeMemoRadiSam system protein A"
                     /protein_id="HZC02555.1"
                     /translation="MQSTEQDLLTSTVRHDLLIQIARRSIEHGLEDSCPLQVDAAGFP
                     PSLQEYKPCFVTLKIKAQLRGCMGDLDAKRPLVGNIAANAYAAAFKDPRFPPLIREEY
                     PEITLHISILSPATVIDFSSEEDLLCQLRPGIDGLIIESTGHRATFLPAVWGSLPDPR
                     EFLRYLKHKAGLSEPHGAIELKAWRYTAESFSE"
     gene            1619..2032
                     /locus_tag="VE844_14735"
     CDS             1619..2032
                     /locus_tag="VE844_14735"
                     /inference="COORDINATES: protein motif:HMM:NF024940.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC02556.1"
                     /translation="MRGRKPRDFSLAAHDVPILQQIARSRILPWFQVQRARVVLAIAD
                     GERVQTVAFQLQCDPSTVWRFCRRYEQAGLEGLLSEAPRSGHPIEISPSAARSDRATG
                     LSGADRQGVAYYPLDQSGSSSPGRRRRDCTEHQCR"
     gene            1914..2741
                     /locus_tag="VE844_14740"
     CDS             1914..2741
                     /locus_tag="VE844_14740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002619292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02557.1"
                     /translation="MQLACLEPIAKGLHITHWTSQDLARQAVADGIVPSISAGSVQRI
                     LREVDLQPHRTHYWKTARLDALFKQRAEKILWCYATAARLVRSGFWVACVDEMPNLQA
                     IERDPIRRAIPGAIEQQEFEYVRHGTVNVLVFLIVHSGRMEAACPAHKDADHYIQALQ
                     QFRQRHRYLRGVFLIHDGDPSHTAAATEDYFKRQPWWRPRLTPAHASWLNQAELLNDA
                     FSFHYLRRGSWHSRQDLIEHIEAAWPEYNQLYAHPFEWTWTNQKMRQWFAQHATEPA"
BASE COUNT          639 a          857 c          831 g          708 t
ORIGIN      
        1 taaaaataag gtttatccat tggataccgg ctgcgtctgg ggcggtgagc tcaccgcctt
       61 acgcctctcc gatctgcgtt tttacagtgt ggctgctatc ctccctccag ctaggctata
      121 atttaaagga gagggataag ctgagggtga gtcgatgagc agaacacgtt tcccggcggt
      181 agcgggttat ttttatcctg aggtggccga tgagttgcga agggcggtag tgaattacct
      241 cgaccaggcc gagcggagac tctctgtgcc aaaggccctt attgcgcccc atgccggata
      301 catctactct ggagcggtag ccgcatcggc ctatgcctgc atagcccctg ctcatgcgac
      361 catcacccgg gtgatcgtgc tcggtccggc acaccgggtc tatttacgag gacttgcctt
      421 atgcagcgcg gagagcttta ctaccccgct cggtaggata cccgttgatc aggaggctat
      481 cgaacacatc cgggatcttc ctcagatcgt taccatggac cgcgcacatg ccttagaaca
      541 tagcctcgag gttcaactcc cttttctaca aatggtgctg gatcagttca gcctggttcc
      601 gctggtggtc ggagatgcct ctccagaggc agtgagcgag gtgttagtgt gcctctgggg
      661 tggaagagaa accctgatcg tggtgagctc cgatctcagc cattattatg actacgacac
      721 tgccaaagct ctggatcagg agacctccag gaatatcgaa gcgctgcgct cggatatatc
      781 tcctgaacgc gcctgtggtt gtatgccgct caacggcctg ttatatcttg ccaagcagca
      841 agggtttcag gtgaccaccc tggatctccg aaattcgggt gacaccgccg gaccacggga
      901 tcaggtggta ggttacggcg cctatgcaat ccactgaaca ggacctactc acatccaccg
      961 tgcggcacga tctcctcatc cagatcgcac gccgctccat cgagcatggc ctggaggata
     1021 gctgcccatt gcaggttgac gcggccggat ttccaccgtc tctacaggaa tacaagccgt
     1081 gtttcgttac tttgaagata aaagcgcagc tccgaggttg catgggcgat ctggacgcca
     1141 aacgccctct cgttgggaat attgccgcca atgcctatgc cgccgccttc aaggatccgc
     1201 gcttcccacc tttaattcgg gaggaatatc ccgagatcac gctacatatt tcaatcttat
     1261 cccctgccac cgtcatcgat ttcagctcag aagaggacct cttgtgtcaa ctgaggcccg
     1321 gcatcgatgg gttaattatt gaatcaacgg gccaccgtgc caccttcctt cccgcggtct
     1381 ggggatcctt gcccgatcct cgggagttct tgagatacct caagcataag gcagggcttt
     1441 ctgagcccca tggggctatt gagcttaagg cctggcgtta taccgcagaa tccttttctg
     1501 agtagctcca gtactctctc aatcatttac ctagtgtgtc tgatcacaag ttttgcaaga
     1561 aattctgagc agttataatg cgacataatg caagctctag ctaccttgga ggctgctcat
     1621 gcgaggccga aaaccccgcg acttttcgct ggctgctcac gatgtgccga ttcttcaaca
     1681 gattgcgcgc agccgcatct taccgtggtt tcaggtccaa cgggcacgcg tggtattggc
     1741 catcgccgat ggcgaacgtg tccagactgt ggcctttcag ttgcaatgtg acccctcgac
     1801 cgtttggcgc ttctgtcggc gctatgaaca ggctgggctt gaggggttat tatcggaggc
     1861 accccgttcg ggccatccga ttgagatttc cccctctgca gcgcgctcag atcgtgcaac
     1921 tggcctgtct ggagccgatc gccaaggggt tgcatattac ccattggacc agtcaggatc
     1981 tagctcgcca ggccgtcgcc gacgggattg taccgagcat cagtgccggt agcgtgcagc
     2041 gtatcctgcg tgaggtcgac ctgcagcctc atcgtacgca ctattggaaa acggcgcgcc
     2101 tggacgcgct gttcaaacaa cgggcggaga agattctgtg gtgttatgcc accgccgcgc
     2161 gcctggtgcg cagcggcttt tgggtcgcct gcgtcgacga gatgcccaat ctccaagcga
     2221 ttgagcgcga ccctatccgt cgggcgattc ccggcgcgat cgaacagcag gagttcgagt
     2281 acgtacgcca tggcacggtc aatgtgctgg tgtttctgat cgtgcatagc ggtcggatgg
     2341 aagcggcttg cccagcgcat aaagacgctg accattacat ccaggcgttg cagcagtttc
     2401 ggcagcgcca tcggtacttg cgcggtgtgt ttctgattca tgacggtgat cccagtcata
     2461 ccgcagcggc caccgaagac tactttaagc ggcaaccttg gtggcgaccg cggttaacac
     2521 ccgcgcatgc ctcttggctc aatcaggcgg aattgctcaa cgatgccttc agtttccatt
     2581 acctgaggcg cggctcctgg catagccgcc aagatttgat cgagcacatc gaagccgctt
     2641 ggcccgaata taatcaactc tatgctcatc catttgaatg gacttggacc aatcagaaaa
     2701 tgcgccaatg gtttgctcaa catgcgaccg aaccagcttg agttattttc ttgcaaaact
     2761 tgtgatcagg cacactagac tatcctggtc ttagccgggt gcaattccaa gccgcactct
     2821 gccagccgag ccgctatact tcgggcggga caagatgaaa cttttgagaa tctcggtaaa
     2881 agttggacgg caataacgag ttcaacttcg acccggaggc tctcaaatgc ccaagctgga
     2941 gtttagccca gaagaggtag aggcggttgc gctattggcg gttccaccat ccgcacccgc
     3001 acgtgcagcg gaagatggaa atagtctact tgcgg
//
LOCUS       DASQSL010001436         1379 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_78360, whole genome shotgun sequence.
ACCESSION   DASQSL010001436 DASQSL010000000
VERSION     DASQSL010001436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1379
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78360"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1156
                     /locus_tag="VE844_14745"
     CDS             <1..1156
                     /locus_tag="VE844_14745"
                     /inference="COORDINATES: protein motif:HMM:NF014443.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HZC02558.1"
                     /translation="TFEAMSGFTTTGATLLSDIEAQTPSILFWRSMTQWLGGIGIVVL
                     FVAVAPTIGAGAARLLGAEVSGFTHTRLTPRIADTAKALAVIYLTLTVTTTLALLLAG
                     MNLYDAVVHAFTTVATGGFSPKAASIAFYDSLAIEAVLIVFMTLSGVSFSLYYLLYTR
                     RRFDAVLDRELLTYLAIIVGTALFVWGVLVFEGDYGGSWGQALRDSVFSVTSIMTTTG
                     FVTDDFDQWNTAAQVALVLLMFVGGCAGSTAGGIKVIRIMVIVRTNFQEAFHMVHPRA
                     VTLLRIGNRVLPERVRLAVLGLFAAWIAVFIQATLLVALQEDLSLVSAATAVATTLNV
                     VGPGLGQVGATESFEAVNAFGRVVLTGCMLLGRLEIFTALALLSPAFWKR"
BASE COUNT          248 a          395 c          410 g          326 t
ORIGIN      
        1 gaccttcgag gcgatgagcg ggttcaccac cacgggggcc acgctgctct ctgacatcga
       61 ggcccagacg ccatccatac ttttctggcg cagcatgacc cagtggctcg gggggatagg
      121 gatcgtggtc ctcttcgtgg cggtggctcc tactatcgga gcgggagccg cccgcttgct
      181 tggggccgag gtctcggggt tcacccacac caggcttacg ccgcgcatcg ccgacacggc
      241 aaaagccctc gcggtcatct acctgacgct cactgtgacc acgacgcttg ccctgctctt
      301 ggcaggcatg aacctctacg acgcggtggt ccacgctttc actaccgtgg ccaccggggg
      361 gttcagcccc aaggctgctt ccatcgcctt ctatgactct ttggccatag aagcggttct
      421 catcgtcttc atgacccttt cgggggtctc gttctccctc tactatctac tttacacccg
      481 gcgccgcttc gacgcggtgc tcgatcggga gctgcttacc tacttggcga tcatagtggg
      541 gactgccttg ttcgtatggg gcgtgctggt cttcgaggga gactacgggg gatcttgggg
      601 ccaggcgctt cgagactcag ttttctcggt cacaagcatc atgaccacca cagggtttgt
      661 cacggacgat ttcgatcagt ggaacacggc ggcccaggtc gcacttgtac tgcttatgtt
      721 cgtcgggggc tgcgccgggt cgaccgccgg ggggataaag gtcatcagga tcatggtcat
      781 cgttcgcacc aacttccaag aggccttcca tatggtgcat ccccgtgctg tgaccctgct
      841 gaggatagga aatcgggtat tacccgagag ggtgcgccta gcggttctgg gactcttcgc
      901 tgcttggatt gccgtattca tccaggcaac attactcgtg gctcttcaag aagacctcag
      961 ccttgtttcg gcggcgactg cggtagcgac cacactcaac gtggtaggtc cgggcttagg
     1021 ccaggttgga gctacggaga gctttgaggc tgtcaacgcc ttcggacgcg tagtactgac
     1081 aggctgcatg ctgctcggga ggttggagat atttaccgcc ctggcgctgc tctctcctgc
     1141 attctggaaa cgttgagaga cttagcgagg cgagtttccg agaatcggcc agtgccggaa
     1201 gataggtttc cgggaatgaa cctgcagaga ttgtcaaaaa cagccgaaat gcgatctcag
     1261 ccataaaatt gtttgaccca tgaggcgaag atggtgcctc tttgcctcgt ttcgtaggct
     1321 cgtgaagcct cagttcagct ctggtcgtga gttttcagac agtttctcag tgttccaac
//
LOCUS       DASQSL010001437         2753 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_147453, whole genome shotgun sequence.
ACCESSION   DASQSL010001437 DASQSL010000000
VERSION     DASQSL010001437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2753
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147453"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..603)
                     /locus_tag="VE844_14750"
     CDS             complement(<1..603)
                     /locus_tag="VE844_14750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HZC02559.1"
                     /translation="MIIRPDGLLLEWTDTTEHYPEASRDFQQELARRYHAEPDAWLLF
                     LSFSDPHLPLAPSLAFWRDLACSFADKLVHLPDLEALRDQATATLEEVEVEHWLAVAP
                     LCPGAEYLNALSVQRLWSTLQDTFRRLMKTYDGTVEAFMRAYSPTRQLAGRIFFHLVE
                     NTKGPSPFAFLVTYATRLGSDGTARHLPLKYALQEYGNDRD"
     gene            complement(673..1791)
                     /locus_tag="VE844_14755"
     CDS             complement(673..1791)
                     /locus_tag="VE844_14755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006423936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02560.1"
                     /translation="MRYDNFYPPYVPVAERRAKAERKLLQLRKKQPNIKPVIIAGNSL
                     ATTWWGKSWNSNLERYADYSNRIGRGRSYVRHRAVLDLQLKPGSVTALVQGSEVQPYR
                     VAITVDTLSANYWSTIRAACVGCFDSLSELLAGTFPQALKDLFFAKGAGLFPSPREIH
                     FDCSCPDWASMCKHVAAALYGVGARFDEDPSLFFALRGITMDDIITQTVADTTQTLLR
                     KAEHQSANVLDDVNLGDVFGIRLDDLHTPRPARPRVQPKPSTRTKHAAQTQKTHASKT
                     RVPAGQQRAAQRLSTPQHKAVAPATAAGPVAVPTRSPGTMLEALVKALGKTRQGKSLE
                     QLQGRLGWTKIQLRNAISRAGAKGFVEQVTSGVYRQKV"
     gene            complement(1903..2199)
                     /locus_tag="VE844_14760"
     CDS             complement(1903..2199)
                     /locus_tag="VE844_14760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02561.1"
                     /translation="MTQNIQRVLDARHHAGTRRIEVDLLRHMAPVYVQRINFRGVVQF
                     PVARYRNCLILTTPSRARRRANAATGDEHQSPEASDSFKEADLTEREAMDVPRR"
BASE COUNT          553 a          783 c          795 g          622 t
ORIGIN      
        1 gtcgcgatcg ttgccgtatt cctgcagcgc atatttcagc ggcaggtggc gtgccgtgcc
       61 atcactgccc aggcgcgtgg cataggtcac cagaaacgca aagggtgacg ggcctttggt
      121 gttttcgacc agatgaaaaa aaattctccc ggccagctgc cgggtgggac tgtaggcacg
      181 catgaaggct tccacggtcc cgtcataggt tttcatgagg cggcgaaatg tgtcttgcag
      241 ggttgaccag aggcgctgca cagagagcgc attgaggtat tctgcccctg gacacagcgg
      301 cgcaacggcc agccagtgct cgacttcgac ctcttccagc gtcgccgttg cttgatcgcg
      361 tagggcttca aggtctggca agtgcaccag tttatcggca aagctgcagg ccaggtcgcg
      421 ccagaaagcc agagacggtg ctaagggcag gtgcggatcg gaaaaactca gaaacagtaa
      481 ccaggcgtca ggttcggcat gataacgtcg agcgagttcc tgctgaaaat ctcgcgatgc
      541 ttcgggataa tgctcagtgg tgtccgtcca ttccaacagc agtccgtcgg gacggataat
      601 cacatgtaat tcctgctgcc tcataggtct cccagggcgt gatagcgcct accggatgtg
      661 agaaatgtcg ccttacactt tctgccgata gacgccggaa gtgacctgtt caacgaaccc
      721 tttggcgcct gcccgactga tggcgttgcg gagctgtatt ttcgtccatc ccaacctgcc
      781 ctgcagctgc tcgagggatt tgccttggcg cgttttccca agcgctttga ccaacgcctc
      841 cagcatagtc cctggggacc tagtcggcac agcgacaggc ccagctgcgg tcgctggcgc
      901 caccgctttg tgctgtggcg tgctgaggcg ttgtgctgcc ctctgctggc cggctggcac
      961 acgcgtcttg ctggcatgag tcttctgggt ctgtgcggca tgctttgtcc tcgtggaggg
     1021 tttcggctgc acgcgaggcc gggccgggcg aggcgtgtgg agatcgtcga gccgaatgcc
     1081 gaacacatcg cccaagttga catcgtccag cacgtttgca ctctgatgct cagccttgcg
     1141 taacagcgtc tgggttgtgt cggccacggt ttgcgtaatg atgtcgtcca tcgtgatgcc
     1201 gcgcagcgca aagaatagcg acggatcttc atcgaatcgg gcgcccacac cgtagagggc
     1261 ggcggcgacg tgtttacaca tcgacgccca atcaggacaa ctgcaatcga aatggatttc
     1321 ccgaggcgac ggaaagaggc cggcgccttt ggcgaaaaac aggtccttca aggcttgcgg
     1381 aaaggtgccg gccagcagtt cgctcagcga gtcgaagcac cctacgcagg cggcgcggat
     1441 ggtggaccag tagttggcac tgagcgtgtc gacagtgatg gccacacggt acggttgcac
     1501 ctcactgccc tgcaccagag cagtgacgct gccaggtttc agctgcaaat ccagcactgc
     1561 cctatgtcgg acgtaactgc gtccacggcc aatccggttg ctgtaatcgg cgtaccgttc
     1621 caggttgctg ttccaggact tcccccacca ggtcgtcgcc aggctattcc cagcaatgat
     1681 cacaggtttg atattcggtt gcttcttgcg cagctgcagc agctttctct ctgctttggc
     1741 acgccgttcc gccactggga cgtatggtgg ataaaaatta tcataacgca tcgccgctcc
     1801 acctcttgtc gaacaaggtg cgttccccgt acaggactgc tcttcatcct tgtgcttccc
     1861 gttcacgggg tatccgtgcc attcgtgcaa aaacccacga tttcatcggc gaggaacatc
     1921 catggcttcg cgttctgtta agtccgcttc cttaaaagaa tcactggctt ccggcgattg
     1981 gtgttcgtcc ccggttgctg cattcgcccg ccggcgcgca cgggaagggg tcgtgaggat
     2041 caggcagtta cggtatcgag ccactggaaa ctgcactacg ccacgaaagt tgatcctctg
     2101 aacgtacacc ggcgccatgt ggcgcagcag atccacttcg atacgccgcg tcccagcgtg
     2161 atgccgcgca tccaggaccc gttggatgtt ctgggtcatc caccccatga cgatgtgggc
     2221 cagtcaggct tcccggcatc aacggagaca tgcgtcgtgc tatcctgtcc agttgtgtgg
     2281 acaaggcatg catcgtctac tcagtgagga cagcggcaag gattcaggtc aaaaactcat
     2341 ggatctctgc ctgcgcgaaa aatccgagca gttctaacgc ctgccattta ccaaactaca
     2401 ggtaagtaaa cgccccaagc gtacggatct ctcactggat ttgcaagggt tacaccgggg
     2461 agggcgcgag ggatttagta aacacccctg tgcccatgct gtcggtggga tgtgcggtgt
     2521 gtggatcgtg cacgaatcgt ggccgcagcc tgagaggggg tacaaacctt gcttgacaac
     2581 tcttatggat tacaactttg gaaggtcatg gttggacgga tgagtcccac aaaccaccct
     2641 tttttgcgtc agattttgac gtctaagata gtgtctttag agactgctct atagcatttc
     2701 aatttcacct ttccagttca cctttccagg ccgttgctat atattccctt agt
//
LOCUS       DASQSL010001438         1034 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_189288, whole genome shotgun sequence.
ACCESSION   DASQSL010001438 DASQSL010000000
VERSION     DASQSL010001438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1034
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189288"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..999)
                     /gene="gcvT"
                     /locus_tag="VE844_14765"
     CDS             complement(<1..999)
                     /gene="gcvT"
                     /locus_tag="VE844_14765"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008224421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004047 - aminomethyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HZC02562.1"
                     /translation="MTNKTALYSEHIKLGATLVDFAGWDMPLHYGSQIQEHYQVRREA
                     GMFDVSHMTVVDLDGAGTRALLRHLLANDVARLSAIGQALYSCMLNEKGGVIDDLIVY
                     YRGGDRFRLVTNAATRAQDLAWIQRQAGGFEVTVTPRPELNLIAVQGPKAQGHILPLL
                     GSRLREAAQALPRFHACEDEALFVSRTGYTGEDGFELILRAEQCIQLWQALWHAGVVP
                     AGLGARDTLRLEAGMNLYGTDMDETTTPLESGLGWTIAWEPGARDFIGRRPLEAQHES
                     GPSHIQLGLVLLEKGVLRAHQAVVVEGLGMGIITSGSFAPTLGRAIALARVPAGTRG"
BASE COUNT          233 a          324 c          271 g          206 t
ORIGIN      
        1 cccgcgtgtg cccgcaggga cacgcgctaa ggcaatggcc cggcctaagg tcggtgcaaa
       61 actcccgctg gtgatgatcc ccatcccaag cccctcaact accacagcct gatgagccct
      121 caatacaccc ttctctaaca agaccagccc tagctggatg tggcttggcc cgctctcatg
      181 ctgggcttct aggggccttc tcccgataaa atcgcgcgct ccaggttccc aagcgatggt
      241 ccagccgagt cccgactcta gcggtgtagt ggtctcgtcc atatcggttc catagagatt
      301 catgcccgcc tcaagccgca gcgtatctcg tgcacccagc ccggccggca cgacccccgc
      361 atgccacaag gcctgccaga gctggatgca ctgttcggct cgcaggatca gctcgaaccc
      421 atcttcgccc gtatagcccg tacgggagac aaagagagct tcatcctcac aggcatgaaa
      481 ccggggcaac gcctgggcgg cttctctcaa tctggatccg agcaatggca ggatatggcc
      541 ttgggccttg ggtccctgca cggcaatgag attgagctcc ggccttggtg tgaccgtaac
      601 ctcaaaacct ccggcctgtc tttggatcca ggcgagatcc tgcgcgcgcg tagcggcatt
      661 ggtcactagc cgaaagcgat ctccaccgcg ataatacacg atcaaatcat cgattacccc
      721 gcccttctca ttaagcatac aagagtaaag ggcttgaccg atagcgctca ggcgcgccac
      781 atcgttggcc aaaagatgac gtaacaacgc gcgggtacct gcgccatcga gatctaccac
      841 cgtcatgtgg gaaacatcga acattcctgc ctcccggcgg acctgatagt gttcctggat
      901 ctgtgagccg taatggagcg gcatatccca accggcgaag tccaccaggg tggcacccag
      961 cttgatgtgt tcagaataaa gcgcagtttt attagtcatg gatactggag gaaattaagt
     1021 aaaccgagta ttaa
//
LOCUS       DASQSL010001439         1243 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_198007, whole genome shotgun sequence.
ACCESSION   DASQSL010001439 DASQSL010000000
VERSION     DASQSL010001439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1243
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198007"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(222..>1243)
                     /locus_tag="VE844_14770"
     CDS             complement(222..>1243)
                     /locus_tag="VE844_14770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02563.1"
                     /translation="FTVLPHFVLRYRSMRPDMARNALLATQGGLSLERCAVIGHLSPM
                     ALYRLMCALGHHSVVTVLTRGGLALPPYFLVDEQHSRCLTDKVYLPTIVWGRVLWPLG
                     YTEEASAAALTQSYGVFERAASQQDPSSRVRGILTDGFESTTKGMRTLFSRARLGNCL
                     RHALTKLPGKLTGIASPVRKALRSQFHTLWYRARQRKGLRVFALGQRLRHFADHVAHS
                     AGVANGERVRRWFQDKRTGWYAVLEDPQMPVTSTLLDQAHNAFERKLFAMKGFHHPGG
                     SQQAFLIGLAHLYNLVPYQRRAKHGSQCGVEVEGGTFPTRDWCLNLQILTSGGFQRAP
                     DTLHH"
BASE COUNT          259 a          373 c          372 g          239 t
ORIGIN      
        1 atgctagcgc ttccagcgct agagcggctt agacaggctg cgtaacctct gtagtcttat
       61 agtttaccta taattaggaa ctactaggct gtggatatgc caccctggtg gacaacgctc
      121 cgcgttgaca cacagggctt ggacaagtct tcgacttgcc cacatatcca cgagcctcta
      181 ctacgaaaag aattttctct ttttttcaca ttccaccgga tttagtggtg gagtgtgtca
      241 ggcgctcgct gaaagcctcc tgaggtgagg atctgcagat tgaggcacca atcacgtgtg
      301 gggaaagtcc cgccctcgac ttccacgcca cattggctgc catgcttggc ccggcgttga
      361 tacggcacca ggttgtagag gtgcgccagc cctatgagaa acgcctgttg gcttccacct
      421 ggatggtgaa accccttcat cgcgaagagt ttccgctcga aggcgttgtg ggcctgatct
      481 agcaaagtgc tagtcaccgg catctggggg tcttcaagca ccgcatacca gcccgtcctc
      541 ttgtcttgga accagcgtcg tacgcgctcc ccgttggcca cccctgcgct gtgcgccacg
      601 tggtcggcga agtggcggag ccgttgaccc agcgcaaaca cccgcaagcc cttacgctgt
      661 cgcgcccggt accatagcgt gtggaactgt gagcgtaagg ccttgcgcac gggagacgcg
      721 atgccggtca gtttcccagg gagcttggtg agcgcatggc gtaggcagtt acccaggcgc
      781 gccctcgaaa acagcgtacg catacccttg gtggtgctct caaagccatc cgtcaggatg
      841 ccccggactc gagacgacgg gtcctgctgg gatgccgcgc gttcaaacac gccatacgac
      901 tgggtcaagg ccgcggcact ggcctcctcg gtgtagccga gaggccagag cacgcgaccc
      961 cagacaatcg tgggcagata caccttgtcg gtgagacagc ggctgtgctg ctcgtcgacc
     1021 aagaaatagg gaggcagcgc gagaccaccc cgggtcagca cggtcaccac gctgtgatgg
     1081 cccagtgcgc acatcaaacg atagagggcc atcggcgaga gatggccgat gacggcgcac
     1141 cgctctaaac tgaggccgcc ctgcgtcgcc aacaaagcgt tgcgtgccat gtcaggacgc
     1201 atcgagcgat agcgcaagac gaagtggggc aggaccgtga aca
//
LOCUS       DASQSL010001440         1069 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_24763, whole genome shotgun sequence.
ACCESSION   DASQSL010001440 DASQSL010000000
VERSION     DASQSL010001440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24763"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(205..>1069)
                     /locus_tag="VE844_14775"
     CDS             complement(205..>1069)
                     /locus_tag="VE844_14775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02564.1"
                     /translation="WLWLPTVGLLAIYLLLLFPDGRLPSRRWRPLAWLSGLVMVLLGV
                     DSVLSPGELTDLEGMRNPFGLEGAPWLVDAEIVLLLLFVACILASAVSLILRYRHSGG
                     EVRQQIKWIALAGSFVGMLLSTVLGVIIVSEVMGGSGGITPLWLQILLFVMVLSFTGV
                     PVAIGFAVLKYRLYDIDLLINRTLVYGSLTVSLAVVYFGGVTVTQAIFRTLTGQEEQP
                     QLAVVVSTLVIAALFNPLRRRIQSFIDRRFYRRRYDAAKTLEAFSAKLRDETDLDALS
                     NDLVGVVRDTM"
BASE COUNT          252 a          316 c          301 g          200 t
ORIGIN      
        1 ttccctacat cgtccatagc gtctctcagc tgcccctctg agaggttaca gggcatcttg
       61 cgaatcgggg ctattcagga tcgtggatat gaacctccga gaattccact tcttctaggc
      121 acttgcgtga ataagggctt gctagcctgc ctgctcgccc ttccggggtg tatcggggcg
      181 cagccacaaa gagacgtgag caggttacat agtgtccctc accactccta ccaggtcgtt
      241 gctcaaagcg tccagatcag tctcatctct gagcttggcg gagaaggctt ctagagtctt
      301 ggccgcatcg tacctacgac ggtagaagcg tctgtctata aacgactgga tacggcgtct
      361 aagtggattg aacagggccg ctatcactag ggtggagact acaacggcta gctgtggctg
      421 ctcctcctgg ccggtgaggg tgcggaagat cgcctgggtc acggttacgc ctccgaagta
      481 caccactgcc aatgacacgg tgagcgagcc gtagacaagc gtgcggttta ttaggaggtc
      541 tatgtcgtag aggcgatatt tgaggacggc aaagcctatc gctacaggaa ctcctgtgaa
      601 gctcagcacc atcacgaaca ataggatctg aagccacaat ggcgtgatgc ctccgctacc
      661 ccccatgacc tccgatacga tgatcacgcc gagtacggtg ctcaggagca tgcccacgaa
      721 cgaaccggca agggctatcc actttatctg ctgccgtacc tctcccccag aatgccggta
      781 gcgcaagatc aggctcaccg ccgaggcgag gatacatgca acaaagagca ggagaagaac
      841 tatctcagca tcgaccaacc aaggagctcc ctccagcccg aacgggttgc gcatcccctc
      901 aagatcggtc aactctccgg gggagaggac gctatcgacg ccgagcaaga ccatcaccag
      961 cccagagagc caggccagag gtcgccacct cctagagggg agcctcccgt cggggaacag
     1021 caggagcagg tagatggcga gcagccccac ggtgggcaac cacagccat
//
LOCUS       DASQSL010001441         1549 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_90825, whole genome shotgun sequence.
ACCESSION   DASQSL010001441 DASQSL010000000
VERSION     DASQSL010001441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1549
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90825"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            286..801
                     /locus_tag="VE844_14780"
     CDS             286..801
                     /locus_tag="VE844_14780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007921683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC02565.1"
                     /translation="MRAPIFVRPLTESECDTLRAGLRSSEAFTLRRSQILLASEGQTP
                     RQIARRVGCGDQTVRNVLCAFAAEDVACLQQKSSRPKSVKPDLDESKREQLRDLLHQS
                     PREFGKARSTWTLEMLAEVCFDQELTTRLVSDETIRQALRRLEINWQRAKHWITSPDP
                     AYALKKSSATA"
     gene            798..1034
                     /locus_tag="VE844_14785"
     CDS             798..1034
                     /locus_tag="VE844_14785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02566.1"
                     /translation="MIRLAERHTEWELGYVDEVWWSRLAQPNLSAWASPDEPLRLVQL
                     EKEKHDPDPVALACYGLLRPATNQVLLRFVQGLR"
     gene            1031..1384
                     /locus_tag="VE844_14790"
     CDS             1031..1384
                     /locus_tag="VE844_14790"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02567.1"
                     /translation="MSHLTTEFLAWGCEQLAATGKKAWLLVWDNASWPISREVRQWIK
                     QHNREAKANGGVRIIVAQLPVKSPWLNPIEPRWEHGKRAIIEPERKLTAQEVIERVCA
                     YYGCKQFDHLSQKVS"
BASE COUNT          334 a          432 c          461 g          322 t
ORIGIN      
        1 taccgcggcc tggcttcctg aggtcgatat tggacacctg gcgcccatga atgacccgaa
       61 aagtcccggg ccccaggcct aggatccgcg tgcttgatta ctcactgtcc tatcggtatc
      121 cttctttccg aagaaaaaat agagatcgcc tattccgagg gcaagccccc cgcgtcgcac
      181 ccgcaagtgc aggcggtcgg ttatgccatc gtcctaggta tatgctccta gtgcgaaccc
      241 aagagaccta ttgtgataat agccaactat gagaagatga gaggcatgag agctcctatt
      301 tttgtccgac cattgaccga gagtgagtgc gacaccctgc gcgctggact gcgctcgtcc
      361 gaagccttta ctttgcgccg cagccaaatt ctgctggcga gcgaaggaca aacaccacgc
      421 caaatcgccc gccgtgtggg ttgtggtgac caaaccgtgc gcaatgtcct ctgcgccttt
      481 gccgcggagg acgtggcatg tttgcagcag aaatcctcac gcccgaagag cgtcaaaccc
      541 gacctagatg agagtaagcg cgaacagtta cgcgatctcc tccaccaaag tccgcgcgag
      601 tttgggaagg cacgttcgac ctggacactg gagatgcttg ccgaagtctg cttcgaccaa
      661 gagctgacga cccgcttggt cagtgatgaa acgattcggc aggcgctgcg gcggctggag
      721 atcaattggc agcgtgccaa acactggatt accagtcccg acccggcgta tgcattaaaa
      781 aaaagcagcg cgaccgcttg attcgccttg ctgagaggca cacggaatgg gaattgggct
      841 atgttgatga agtctggtgg agccgtttgg cacaacccaa tctgtctgct tgggcgtcgc
      901 cagatgaacc gctgcgactg gtccagcttg agaaagagaa gcacgatcct gatccagtgg
      961 cgctggcttg ttatgggttg ttgcggccag ccaccaatca agtgctgttg cgctttgtcc
     1021 aagggctccg gtgagccacc tgaccacgga gtttctcgcc tggggctgcg aacaattggc
     1081 cgccacgggc aaaaaggcgt ggctgttggt ttgggataat gcttcgtggc ctatctcgcg
     1141 tgaggtgcgc caatggatca aacagcataa ccgtgaggcc aaggccaatg gcggagtgcg
     1201 gatcatcgtc gcccagttgc ctgtcaaaag cccctggttg aatccgattg agccgcgctg
     1261 ggagcatggc aagcgtgcga ttattgagcc ggagcgtaag ttgaccgcgc aagaagtgat
     1321 cgagcgcgtg tgtgcctatt atggatgcaa gcagtttgat cacctttcac aaaaggtctc
     1381 ttgattctgc actagggagc ggggcatcga ggcccaaaaa gcgccctaca ccgctcctga
     1441 ccgcctcgga cctggatttg agccacctct cacgggtgtg tcctgggttg ggctcgcggc
     1501 tctggggggt acacagtacg agcggtacga cccccctatg tgcgcgcgc
//
LOCUS       DASQSL010001442         1841 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_12671, whole genome shotgun sequence.
ACCESSION   DASQSL010001442 DASQSL010000000
VERSION     DASQSL010001442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1841
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12671"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            239..1468
                     /locus_tag="VE844_14795"
     CDS             239..1468
                     /locus_tag="VE844_14795"
                     /inference="COORDINATES: protein motif:HMM:NF016847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02568.1"
                     /translation="MLVQPFGDWNVFKQIFFDHWEPFKRAHPRYQTAYYDSLVGKMLN
                     CGNPEQMGYVEHRCHQCGQGKHLVSMSCKSSLCLRCAKVLVDNWVSQVSKVLHEGVIY
                     RHIILTVPAMFRPIFYQNAVALANALMQCGSRCLDDLYSEVKGKALRGGYITVIHTHG
                     RNGQYHPHLHLIATSGGYDGAQERWEHVSFLPYELLHRKWQWHLMDTFRKTLATDEMK
                     RLMDECFRRYGKGLVAHVQKGRVPSQYHSLAGYVAKYVVSPPIAVRRIDRYDGEWVTY
                     HYRSHRTERTEHETVDVKTFIGRMVQHTLTKGFKRIRYYGVQATKTFAKVRAAIQVAL
                     AKVEGVVKGAVKIIARLSYRQRYKKSTGRDPLICLHCGGEMGLWRIWHPRYGVIYDEA
                     QMIKRGTYGSSVQQSGP"
     gene            1437..1673
                     /locus_tag="VE844_14800"
     CDS             1437..1673
                     /locus_tag="VE844_14800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02569.1"
                     /translation="MAQACNNRVPEEGDDVPFGPPIEEYLYRCSACGAEWLVDEVIVD
                     AAVGMAKFRGEYDGRLPSLGCPGCNGDTLEYVDD"
BASE COUNT          425 a          463 c          569 g          384 t
ORIGIN      
        1 gagctcatgg agaagatgaa acaaatcggc aatgctcggg cacttcagcc ccgtctgagc
       61 caacttgata gcataggatt tttcattttt cgattcccag aagtccccat tactcaatga
      121 taagcgggtc gcctgagggt gcctgagggc aggccgatta ggggtggacg acacggctga
      181 agcgtgataa aaacgcgtca tccaacacaa cctgatcacc ccaactcggt gccatccgat
      241 gctggttcaa ccctttgggg actggaacgt cttcaagcag atcttttttg atcactggga
      301 gccgtttaaa cgcgctcatc cacgctacca aacggcctat tacgatagcc tggtgggcaa
      361 gatgctcaac tgtggcaacc ccgagcagat gggctacgtc gaacaccgct gccatcagtg
      421 cggtcagggt aagcacttgg tgtcgatgag ttgcaaatcg tcattgtgcc tgcggtgtgc
      481 caaagtgctg gtggacaact gggtcagcca ggtgagcaag gtgttgcacg agggcgtgat
      541 ctatcgtcac atcatcctga ccgtaccggc gatgtttcgc ccgatctttt atcagaacgc
      601 tgtggcgttg gcaaatgcat tgatgcaatg cgggtcgcgc tgcctggacg atctctacag
      661 tgaggtcaag ggcaaggcgc tcagaggtgg ctacatcaca gtcatccaca cgcacggtcg
      721 caacggccag taccatccac acttgcacct gatcgctacc agtggcggct atgatggggc
      781 gcaggagcgc tgggagcatg tgagtttttt gccctacgag ctgctgcatc gcaaatggca
      841 gtggcacttg atggacacgt ttcgaaagac gctggcgacg gatgagatga agcggttgat
      901 ggatgaatgt ttccggaggt atggcaaagg gttggtggcc catgtgcaaa agggccgggt
      961 accgtcgcag taccacagct tggcaggcta tgtggccaag tacgtggtga gcccaccgat
     1021 cgcggtcaga cgtatcgatc gctatgatgg cgagtgggtc acgtaccatt atcgctccca
     1081 tcgcacggag cggaccgaac atgaaacggt ggatgtgaag acatttatcg gtcggatggt
     1141 gcagcatacc ctgaccaagg gcttcaagcg catccgctat tacggcgtac aagcgaccaa
     1201 gacgtttgcc aaggtgaggg cagccattca agtggcgctg gccaaggtgg aaggcgtggt
     1261 caagggtgcg gtgaagatca ttgcccggct gagctatcgg cagcggtaca aaaaaagcac
     1321 aggacgagac ccgttgatct gtctgcattg cggaggcgag atgggattgt ggcgtatttg
     1381 gcacccgagg tacggggtga tctatgacga ggcgcagatg atcaagcggg gtacatatgg
     1441 ctcaagcgtg caacaatcgg gtccctgagg aaggcgatga cgtccccttt gggccgccta
     1501 ttgaagaata cctctatcgt tgttcggcct gtggtgcaga atggctggta gatgaggtca
     1561 ttgtggatgc ggccgttggg atggccaagt tccgtggcga atatgacggg aggctcccgt
     1621 cacttgggtg tccggggtgc aacggagaca ccctcgaata cgtcgatgac tagaagtccg
     1681 cccgaagggc gctatgttca agacctcgtc aaagggataa aagcccttac agcacaggcg
     1741 acaatagaaa tagggccgct ctaactgcac cgatcccacc atcgtctcca cagtacgtgc
     1801 gacgctaggg cgagccgtta cgagtcgctc acattgaggg c
//
LOCUS       DASQSL010001443         4294 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_133243, whole genome shotgun sequence.
ACCESSION   DASQSL010001443 DASQSL010000000
VERSION     DASQSL010001443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4294
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133243"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..216)
                     /locus_tag="VE844_14805"
     CDS             complement(<1..216)
                     /locus_tag="VE844_14805"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HZC02570.1"
                     /translation="MQTLTHEQLKTMLDRHDDLVLINVLGQEPFEQAHIPGSYNIPVG
                     ERDFVQHVEDTVGNKHSKVVVYCASFEC"
     gene            564..1064
                     /gene="nuoI"
                     /locus_tag="VE844_14810"
     CDS             564..1064
                     /gene="nuoI"
                     /locus_tag="VE844_14810"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012637566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HZC02571.1"
                     /translation="MNRLLHNLQQYVKSLMLVELLKGLATTGQRLFTKKITVRYPEEK
                     TPQSPRFKGLHALRRYPNGEERCIACKLCEAVCPAACITIESEQREDGTRRTQRYDID
                     LFKCIYCGFCEEACPVDAIVLTRIFEFHYEKRGDEIITKERLLAIGDRMEESIAADRA
                     LDAPYR"
     gene            complement(1197..2375)
                     /locus_tag="VE844_14815"
     CDS             complement(1197..2375)
                     /locus_tag="VE844_14815"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZC02572.1"
                     /translation="MRIAIFTDTFWPQVNGVVRTITTLAQGLVSRGHEVAIFTIDVNK
                     IKTQEISSASGLNGQVQIYTFFSATSPWFKDIQLRFPTIVAPFSAARQFRPDIIHSQT
                     SFGIGWDAVMVAKLLKCPLIGTHHGFLAEYLNNIKLDFDLPKRLMRHYLAFYFNRCDA
                     VTTPCRALSQELLDHRLQRPLQVISNPLDLHYFSVNRTKAALRNKYRFTKPTLVHVGR
                     LVAQKSIEVLIDAFARLVKRGIDADLVIIGEGRERPQLEALTRELAIIDSVIFTGLLT
                     GNDLIERVAASDVFVSASTTEAQALAFLEAMALGLPAIGVRAGGVPEYVHHEKNGLVV
                     APHDPEALTQAMRRLIEDAALRESYGACARARVKAYEVRAVLDKLEALYQGLKDRRVH
                     "
     gene            complement(2381..3331)
                     /gene="trxB"
                     /locus_tag="VE844_14820"
     CDS             complement(2381..3331)
                     /gene="trxB"
                     /locus_tag="VE844_14820"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013819634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HZC02573.1"
                     /translation="MPGKHARVLILGSGPAGYTAAVYGARAGLSPVLITGLAPGGQLT
                     TTTDVDNWPGDDQGVQGPELMERMRRHAERFGTEILFDYIHTAELHRYPFRLTGDAGR
                     YTCEALIIATGASAKYLGLPSEEAYRGRGVSACATCDGFFYKAQPVAVIGGGNTAVEE
                     ALYLSNIASHVTVVHRRDRFRAEKILSDRLLEKSRSGAITVEWNHVLDEVLGDDRGVT
                     GILIKSTIHPVTKKINVHGVFIAIGHQPNTQIFEGQLMMEGGYILVKGGSRGSATQTS
                     VPGVFAAGDVADPIYRQAVTSAGSGCMAVLDAEKYLEQLT"
     gene            complement(3344..4186)
                     /gene="folE2"
                     /locus_tag="VE844_14825"
     CDS             complement(3344..4186)
                     /gene="folE2"
                     /locus_tag="VE844_14825"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005960688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003933 - GTP cyclohydrolase activity
                     [Evidence IEA];
                     GO_process: GO:0035998 - 7,8-dihydroneopterin
                     3'-triphosphate biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase FolE2"
                     /protein_id="HZC02574.1"
                     /translation="MNELAAIATHIPDIQSSEDTRYIDIDRVGIKDIRHPIVVRDRSG
                     RDQHTVATFNMYVSLPHNFKGTHMSRFVEILNHHEYEITVESFKHMIVEMTEILHAEA
                     GHIEMSFPFFMIKFAPISKVQSLMDYQVSFIGQIQNKVTSVLVKIVVPITSLCPCSKN
                     ISDYGAHNQRSHVTVQARLRSFVWVEELIEMIEKVGSCELYGLLKRPDEKYVTEKAYD
                     NPKFVEDIVRDVAIRLNADDRITAYVIESENFESIHNHSAYAMVERDKDREKATGASR
                     LLHR"
BASE COUNT          979 a         1170 c         1154 g          991 t
ORIGIN      
        1 gcattcgaag ctggcgcaat agaccactac cttgctatgt ttgttgccca ccgtatcttc
       61 aacgtgctgg acaaagtccc gctctcccac cgggatgtta taggatcccg ggatatgcgc
      121 ctgctcaaag ggctcctgtc ccagtacatt gattagcact agatcgtcgt gcctgtctag
      181 catcgttttc aattgctcat gtgttaaggt ctgcatagtg gtttctcctg tcgatttaat
      241 cgagcgattt taatgaaaaa gatccctcca gcgtgaggct ggggtaaagg tgaggcgctc
      301 caggtatttt catggtaaca taatacctta tcctttaagc ttattcggca acctctctgc
      361 catacctacc agagcggtgc gacagggttg gcgttcaata actatagtga tcgcctcttg
      421 ggcttttaga gaagataggt aaaagggttt gccggtaaga attaccgata taaatgtaaa
      481 ctttacagtc gctagcgtcc ttgatcccgg tacagcgcct tgattgcatt aaagcttcat
      541 ttaaccgctc ggagtgacaa accatgaaca gactgctaca taacctccaa cagtatgtta
      601 agagcctgat gctagtggag cttttaaagg gtctcgcgac cacagggcag cgtttgttca
      661 ccaagaagat cacggtccgg tatcccgagg agaagacgcc gcaatcgcca cgatttaaag
      721 ggctgcatgc gctgcggcgc tatccgaacg gcgaagagcg ctgcatcgcg tgcaaactgt
      781 gtgaagccgt ctgtccagcg gcgtgcatca ccatcgaatc ggagcaacgg gaagacggaa
      841 cccggcgcac gcagcgctac gacatcgacc ttttcaagtg catttactgt ggcttctgtg
      901 aagaagcctg cccagtggat gccattgtgc tcacgcggat ctttgagttt cattacgaaa
      961 agcggggcga tgagatcatc accaaggagc gcttgctggc gatcggcgat cggatggagg
     1021 agagcatcgc cgccgaccgt gctttggatg caccctatcg ataactgccg agaagcttga
     1081 gggtgcaagc agctcttgta ctaccgcaag cgccttgcgc cgggtgggca gcaattcccg
     1141 gtctagattt ttttggtgcg tggaacgcac cctacgagtt ttttgcgtaa gtcctgtcag
     1201 tgaactcgcc gatctttcag tccttgatat aaggcttcaa gcttgtctaa cacggctcga
     1261 acctcatacg ccttcaccct cgctctcgca caggcgccat aggattcgcg caaggccgca
     1321 tcctcgatga gtctccgcat tgcttgagtc agtgcctctg gatcatgggg cgcaaccacc
     1381 aagccgtttt tctcatgatg cacatattca ggaaccccac cggcgcgaac gccaatcgcc
     1441 ggaagcccta atgccatggc ctcaagaaag gccagtgcct gcgcctccgt cgtcgaggcg
     1501 gagacaaaaa catcgcttgc cgccacgcgc tcaatcaaat cgttgcccgt caataggccg
     1561 gtaaagatga ccgaatcgat aatcgccaac tcacgtgtca atgcttctag ctggggccgc
     1621 tcccggccct cgccaatgat aacgagatcg gcatcgatcc ccctcttcac cagacgggca
     1681 aacgcatcga tgagcacctc gatgcttttt tgcgctacca agcggcctac atgcaccagg
     1741 gtaggcttgg taaagcggta tttatttcgc aacgccgctt ttgtcctatt taccgaaaaa
     1801 tagtgcagat ccaagggatt ggagatcacc tgaagcggac gttgcaagcg gtgatcgagc
     1861 agttcttggc tcaaggcgcg acagggggta gtgaccgcat cgcagcgatt gaaataaaac
     1921 gcgagatagt ggcgcatcag gcgcttgggc agatcgaagt cgagtttgat gttgttgaga
     1981 tactccgcca gaaagccatg atgagttcca atcagtggac acttcaacag cttagccacc
     2041 atgaccgcat cccagccgat cccgaacgag gtctgggagt ggatgatatc gggccggaat
     2101 tgacgtgctg ccgagaatgg agccacgatc gtcgggaatc gcagctgaat atccttaaac
     2161 cagggtgagg tggccgagaa aaaggtatag atctgaactt gaccgttgag tccactggct
     2221 gaggaaatct cttgcgtctt tatcttattg acatcgatgg taaagatcgc gacctcatgc
     2281 ccgcgggaga caagcccctg ggctagggtc gtaatggtcc gcaccacacc gttgacttgc
     2341 ggccaaaagg tatcggtgaa gatggcgatg cgcaaggata ctaggtcagt tgttccagat
     2401 atttttctgc atcgaggacg gccatacagc ccgagccggc ggaggtcacg gcttgccgat
     2461 agatgggatc ggctacgtcc ccggcggcaa agactccggg cacgctggtt tgggtggcgg
     2521 atcctcggct gccccccttg accaggatat agcccccctc catcatgagc tgtccctcaa
     2581 agatctgggt gttcggctga tgtccaatgg caatgaacac cccatggaca ttgatcttct
     2641 tcgtgacagg atggatcgtg cttttgatta ggatcccggt gaccccccgg tcgtccccga
     2701 gcacttcatc gaggacatgg ttccattcca cggtgatagc cccgctacgg ctcttctcca
     2761 acaagcgatc gcttaagatc ttctcggccc ggaatcgatc ccggcgatgc accacggtaa
     2821 cgtgggaagc gatgttagac agatacaggg cctcctccac cgccgtgttg ccaccgccga
     2881 tcacagccac cggctgagcc ttatagaaaa aaccatcaca ggtcgcgcac gccgagacac
     2941 cgcgtcctcg ataagcctct tcggaaggca ggccgagata cttggccgag gcgccggtag
     3001 cgatgatcag cgcctcacag gtatagcggc ctgcatcccc ggtcagcctg aagggatacc
     3061 gatggagctc ggccgtgtgg atataatcga agaggatctc ggtgccaaaa cgctcggcat
     3121 ggcggcgcat gcgctccatg agctctggcc cttgcacccc ttggtcatcg cctggccagt
     3181 tgtctacatc ggtagtggtg gtcaattgcc cgcctggtgc gaggcccgtg atcaagaccg
     3241 ggcttaagcc ggcccgcgca ccatacaccg ctgcggtata gcccgccggt ccagagccta
     3301 gaatcaacac gcgagcgtgt ttgccaggca taggagcagc cgatcatcta tgaagtaacc
     3361 gacttgcgcc cgtggctttc tcacgatctt tgtcccgctc caccatggca taggcggagt
     3421 gattatggat cgattcgaag ttttccgact ctatgacata ggctgtgatc cgatcgtccg
     3481 cattcaaccg gatggccaca tcgcgcacga tatcttcgac gaatttgggg ttatcatagg
     3541 ccttttccgt gacatacttt tcgtccggac gcttgagcag tccatagagc tcacaggatc
     3601 ccaccttctc tatcatctcg atcaattctt cgacccatac aaagctccga agccgtgcct
     3661 ggacggtgac gtgggaacgc tgattatggg cgccatagtc cgaaatattc ttagaacatg
     3721 gacagaggct ggtgatgggc actacgatct tcaccaagac actggtcacc ttgttttgga
     3781 tctggccgat gaacgacacc tgataatcca taaggctttg gaccttagag atgggggcga
     3841 acttgatcat gaaaaagggg aagctcatct caatatggcc cgcctccgca tgtaggatct
     3901 cggtcatctc cacgatcatg tgtttgaacg actccacggt gatctcgtac tcatgatggt
     3961 tcaagatctc gacaaaccgg gacatgtggg tgcccttaaa attatgcgga agactgacgt
     4021 acatattgaa ggtcgccacg gtgtgttggt cgcgcccgga acggtcgcga accacgatgg
     4081 gatgacggat atccttgata cccacccgat cgatatcgat gtagcgggta tcttcactgc
     4141 tctggatatc agggatatgg gttgcgatcg ctgctaattc attcatttca agctgccttt
     4201 ggtgcgctaa gtacttgagt attttaattg gatttagccc ctttagctat cggatctact
     4261 tgaggagagg ctgcttacct atcccgccgg atta
//
LOCUS       DASQSL010001444         1096 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_198035, whole genome shotgun sequence.
ACCESSION   DASQSL010001444 DASQSL010000000
VERSION     DASQSL010001444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198035"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..385)
                     /gene="mutL"
                     /locus_tag="VE844_14830"
     CDS             complement(<1..385)
                     /gene="mutL"
                     /locus_tag="VE844_14830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005370214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HZC02575.1"
                     /translation="MSARSARIHLLPQALIGQIAAGEVIERPASVVKELIENSLDAGA
                     RQIDIEIQEGGISLIRIKDDGWGIEPADLKLALTPHATSKIRSLQDLEQVSTLGFRGE
                     ALPSIGSISRLLLASRARGSSMGWLI"
     gene            488..>1096
                     /locus_tag="VE844_14835"
     CDS             488..>1096
                     /locus_tag="VE844_14835"
                     /inference="COORDINATES: protein motif:HMM:NF013073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HZC02576.1"
                     /translation="MAKITLLLQGGSRSFLLVSALFSPVLMLTGCVDLTKTPGSAVIS
                     PLQNRASSLPVTSSAIKYALGLQGLPYRYGGTSPRTGFDCSGFVQHVYARYGIKLPRR
                     SRDMAAALQRVQAGERCSGDLVFFHVHHPYSHVGIYLGQGHFVHAASRTHPRVMISAL
                     NTRYWAKRLAGFRRPYGSYVPAGRQTGRSAYLNCAATPSEVSF"
BASE COUNT          223 a          329 c          303 g          241 t
ORIGIN      
        1 gaatgagcca gcccatgctc gagccgcgcg cccgcgatgc caaaagcagc cgtgagatcg
       61 aaccgatact cggcagcgcc tccccgcgaa agcccagggt ggaaacctgc tccaggtcct
      121 gaagtgagcg gattttactc gtcgcatggg gggtcaaggc gagcttcaga tccgcaggtt
      181 caatacccca gccgtcgtcc ttgatccgga tcaggcttat gccgccctcc tggatctcga
      241 tgtcgatctg gcgtgcgcca gcatccaaac tattctctat cagttccttg accaccgagg
      301 cgggacgttc gatcacctca cccgcggcga tctggccgat caaggcttgg ggcaaaaggt
      361 ggatgcgggc agaacgggca gacatagcat aaataatagt acaggctgct ggtgtagata
      421 aaaagagttg cagttgactc ggcgggatca aaaagcccaa aatgctgcga aaacaggagc
      481 gcgcacgatg gcaaagataa ccctgcttct ccaaggaggt tctcgctcat ttttattggt
      541 gtcggcattg tttagtccgg tgctgatgct gacgggttgc gtcgacttaa cgaaaacacc
      601 cggatcggcg gttatatccc cccttcagaa ccgggcctcc tcgctgccgg taacctcctc
      661 tgcgattaag tatgcgctcg gcctgcaagg cctaccctat cgctacggcg gtacttcccc
      721 ccgcaccggc tttgattgca gtggctttgt ccagcatgtc tatgcccgct atggcattaa
      781 acttcctcgc cgaagccggg acatggcggc ggctttacag cgcgtccaag ctggtgaacg
      841 gtgttctggc gatctggtat tcttccatgt acaccatcct tactcccatg tggggatcta
      901 tcttggccag ggacactttg tccacgcggc cagccggact cacccccggg tgatgatctc
      961 cgcgctgaat actcgctatt gggctaagcg tcttgcgggt ttccgccgcc cctatggatc
     1021 ctacgtacct gcgggccgtc aaacgggacg aagcgcgtat cttaactgcg ccgcgactcc
     1081 gtccgaagta tcattt
//
LOCUS       DASQSL010001445         1299 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_147481, whole genome shotgun sequence.
ACCESSION   DASQSL010001445 DASQSL010000000
VERSION     DASQSL010001445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1299)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1299)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1299
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147481"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(120..737)
                     /locus_tag="VE844_14840"
                     /pseudo
     CDS             complement(120..737)
                     /locus_tag="VE844_14840"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
BASE COUNT          248 a          398 c          350 g          303 t
ORIGIN      
        1 aatatcggcc tgaataacag ttgccttaga gttgtcctcc aatgattgtt cggctgtgat
       61 tcacggcgac cggttcgtta tctacataga cgacacaagc tgagggatta cagcgttggt
      121 cataagcatt gaaccggcat ccggtagccg cagtgctcga agaaaccacg agcatcgctg
      181 gaggtgactg ccgagagtgc cctaccaatt gcctcgatca gggcctcccg agtcctagct
      241 tcggccttac gcacaagcct cttgatcttc gagaaggctt cctcgatagg gttgagatct
      301 ggagagtaag ccggtaggtg gagcagctgg caacctcgct cctcgatcat ctctttgacc
      361 ctcgctcctt tgtgggctgt caggttgtcc accaccacga cttggccaca gcgcagcgtg
      421 ggaaccagga cccgctccac ataagtctcg aaaacctcat ggtcggttgc accctccacg
      481 gccagcgaag agcccatacc ctcgaaggtc atactcgcaa gcagcgtcgt gttaggcccg
      541 cggttgcgtg gcaccgagta ggatgccctt tgtcctctcg gagaccaggc gtacaaagga
      601 gaaagtgaag tgttggtgcc catctcatcc acgaacacca accgcctcgc gtcgagcctc
      661 ctcgcgacca taaccttcca ggcggccctc aagaactcgt cccgttccac cgcccccata
      721 gtccgttttt ttgggtgaag cccagcctct tcattagccg cctgacggtg gagtcgctaa
      781 gggtcctgcc agttatgtgc tccaggaggc gacgtctttg agagatagtg gcagctggac
      841 gctcccttac gtcctcttcg aggaggctct gggcggtctc gttcaccttg cggggtcgcc
      901 ccggactctt tctgggtctc agcgatcctc cctggttagc ggtcctcgag tagcgcttga
      961 ccgaggagag gctcacatcg aacaggcgag ctgcttgagc ctttgacata cctcgcttta
     1021 tggcagcgac tatctttttg cgcagatctt cagagtaggc tctcatgcat ccatggtcgc
     1081 atgcaggtca acctttatgc tcactgctgt atgaagcgct gctagtctgg ctgctcgccc
     1141 ttttgtgctg gctctgagcg cagccataaa gatacgtgtg cgggctgcat cgtctccctg
     1201 accaccccca cgagatcctc gctcacgtcg tccaggtcgg tctcgtccct gagcctggca
     1261 ccaaaggctt ccaaagtctt ggttgcatcg tacttgcgc
//
LOCUS       DASQSL010001446         1079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_133249, whole genome shotgun sequence.
ACCESSION   DASQSL010001446 DASQSL010000000
VERSION     DASQSL010001446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133249"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(195..977)
                     /locus_tag="VE844_14845"
     CDS             complement(195..977)
                     /locus_tag="VE844_14845"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC02577.1"
                     /translation="MVRQSPRQAGYHMSLWSTKLLKHFLYTRCGVDYSRERVRQLFHE
                     LGFRQRRLRHHHLRADPEEQAAFVIDLDSLLSQWPKDWELLFVDEATVRRHPTLTARW
                     CLVDDVPEVPTGDDHTKVHVYGAVSPLTGRTHYRIRPTLSKGHFADFLKQLSRYYRDK
                     KILLIHDRAPHHRGRAIDEVVKATEGSLMLMPQPRYSPEFNPQERIWKWLRRVVTHDH
                     WFESLSEELQAIRDFFCYVSGRKAEVRQLCTSKTPDSLVALL"
BASE COUNT          259 a          306 c          284 g          230 t
ORIGIN      
        1 caccgcatgg taaacgagcg acgagcgctg actacgcaat ccgtacgtca ccacaatgac
       61 tgaccgaagc tgctcgcggg tcagaaagtc gcgaatttga taagcggcat taagactaat
      121 gggttcaaat atccgtatgg gaaggatctc tggctgttgt agccgtgcca cgcggaccat
      181 caactccaca atacctacag taatgcaact aaagaatccg gagttttgct ggtgcatagc
      241 tgtcgaacct ccgccttacg acccgacaca taacaaaaga aatcccgaat cgcctgaagc
      301 tcctcggata agctctcaaa ccaatgatca tgtgtcacca cccgacgcag ccatttccat
      361 atccgctctt gcggattgaa ctctggcgaa tatctcggct gcggcatcaa catcaagcta
      421 ccctcggttg ctttcaccac ctcatcgatg gctcgtcccc ggtggtgcgg ggcccgatca
      481 tgaatcagga ggattttttt gtcacggtaa tatcgactca gttgcttgag gaaatcagcg
      541 aagtgtcctt tgctcaaagt cggacggata cggtaatgcg tgcgccctgt caggggcgac
      601 accgccccat agacatgaac cttggtatga tcgtctcccg tagggacttc tggaacgtca
      661 tcgaccagac accacctagc cgtcaaggtg ggatggcgtc gcaccgtggc ttcatcaacg
      721 aacaggagtt cccagtcctt gggccactgc gaaagtaagc tatccaaatc gatcacgaaa
      781 gccgcttgtt cttcagggtc tgctcgcaag tgatgatggc gcaagcgccg ctggcgaaag
      841 cccagctcat ggaagagctg gcgtacccgc tcacgactgt agtcgacccc gcaacgggtg
      901 tagagaaaat gcttgagcaa tttggtgctc caaagactca tatggtagcc tgcctggcgt
      961 ggactttgac gcaccacctc cttgaggggc gagcgatagg ccgggtgcag tcacgagggc
     1021 cgaccgggaa tgggctcgcg ttgcaacccc tcaagttcct gctcattgac cgcatgtat
//
LOCUS       DASQSL010001447         1679 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_50165, whole genome shotgun sequence.
ACCESSION   DASQSL010001447 DASQSL010000000
VERSION     DASQSL010001447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1679
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50165"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1529
                     /locus_tag="VE844_14850"
     CDS             <1..1529
                     /locus_tag="VE844_14850"
                     /inference="COORDINATES: protein motif:HMM:NF020683.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="galactose oxidase-like domain-containing
                     protein"
                     /protein_id="HZC02578.1"
                     /translation="VDLERCVSSQIGRWAVQPGERMEGGPAVSVLRGVDLEELPGNPA
                     VTMMHAVLLPRTTKVLFWGYGQRPDHSRLWDHTNPHIDSYELPANQPIDVAADENIWS
                     GSHAILHTSNADGILLVHGGFATGPNVTANTERLSFYFNPVSRRWRPTQPAATGLTAE
                     RRFYPTTLTLADGRALTLFGQDTSTGNPSRSIEVFEPATGTWEAPIPLPASFNYLFYP
                     WTFLLPGGDLFIAGPQVPTRRFTWTATPIVDDLNKRWNTNVGDRGTITGGNMSGTAVL
                     LPLRPPNYRPRLMILGGDGPTAATVEMINLSAANPAWRMLPTMNRRRDRLNAVLLPDG
                     RVFVAGGRPGGGRSEIFDPANVPNGWQLGPRMKYERTYHSAAILLPDGSVLMGGDPMG
                     PGGPTPHERYLPSYFFKPRPVIAGAPVSSTYGADIVIQTPDPSLIEGVILSRPGAVTH
                     GFNMSQRIVGCAILGRDATSIRAQAPPDGTVAPPGYYLLFIVDRDRIPSLGSWIRLMA
                     "
BASE COUNT          338 a          508 c          473 g          360 t
ORIGIN      
        1 cagtagacct cgaacgctgc gtcagcagcc agatcggcag atgggcggtg cagcctggcg
       61 agcggatgga gggagggcct gcggtgagtg tgctgcgtgg ggtggatctg gaagaactgc
      121 cgggcaatcc tgccgttacc atgatgcatg cggtgttact ccccaggaca accaaggttc
      181 tgttctgggg ttacgggcaa cgccctgatc attcgcgtct atgggatcac acgaatcctc
      241 acatagattc ctatgagctg cctgctaacc agcccatcga tgtggcggcc gatgaaaaca
      301 tctggtcggg ttcccatgcc atcctgcaca ccagcaatgc cgatgggatc ctgctcgtcc
      361 atggaggctt cgccaccggt ccaaacgtca ccgcgaacac ggagcgtctg tccttctact
      421 ttaatcccgt ctcacgccgc tggaggccga cacagccggc ggcaacaggg ctcacggcag
      481 aacgccgctt ctacccgacg accctgacgc tggccgacgg cagggccctg acgctatttg
      541 gtcaggacac atcgactgga aatccctcac gctccattga ggtgtttgag ccggcaacgg
      601 gaacctggga agcaccgatc cccctgccgg ccagcttcaa ttacctgttc tacccatgga
      661 cattcctgct gccgggtggt gatctgttca ttgcggggcc tcaagtgcct acacgccgtt
      721 tcacatggac tgcaactcct attgtcgatg atcttaacaa gcgctggaac accaacgtgg
      781 gggatcgggg cactatcacc ggtggcaaca tgagtggaac ggcggtactt ctgccgttgc
      841 gcccaccaaa ttatagaccc cggttgatga tcctcggagg cgatgggccg actgcggcga
      901 cggtggagat gattaatcta tccgctgcaa atccagcctg gcgaatgttg cccaccatga
      961 accgacgtcg tgaccgatta aatgctgtcc tcttgccgga cggacgggtc tttgtcgcgg
     1021 gcggcagacc cggagggggt cggtcggaga tctttgaccc ggccaatgtc cccaacggat
     1081 ggcaattagg tcccagaatg aaatatgagc ggacctacca ttcggccgcg atcttactcc
     1141 cggacggtag tgtgctcatg ggcggagacc caatgggtcc tggtggtccg acacctcatg
     1201 agcgttactt gccctcgtac tttttcaagc cgaggccggt tatcgcgggt gcgccagttt
     1261 catcgaccta tggtgccgat atcgtgatac aaacccctga tccttcgttg atcgaagggg
     1321 tcatactgag tcgaccgggc gctgttaccc atggttttaa tatgtcgcag cgaatcgtcg
     1381 gctgcgcgat cttaggtcgg gatgccactt caatccgcgc ccaggcgcca cccgacggca
     1441 cggtcgcgcc accgggttac tatctactgt tcatcgtcga tcgagaccgg atcccttcac
     1501 tggggagctg gatccgtctt atggcctgaa gattccgtga taccgatacc aaccgggaac
     1561 tacagtaatc tcttgccata accttcaacc tctgccacac tgccacactg ccacactgcc
     1621 acactgccgc accagctaag ttttcgcttc ggatcctaag ttcccgacaa ctttgggat
//
LOCUS       DASQSL010001448         1049 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_24810, whole genome shotgun sequence.
ACCESSION   DASQSL010001448 DASQSL010000000
VERSION     DASQSL010001448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24810"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            168..241
                     /locus_tag="VE844_14855"
     tRNA            168..241
                     /locus_tag="VE844_14855"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:202..204,aa:Arg,seq:cct)
     gene            583..>1049
                     /locus_tag="VE844_14860"
     CDS             583..>1049
                     /locus_tag="VE844_14860"
                     /inference="COORDINATES: protein motif:HMM:NF012464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZC02579.1"
                     /translation="MYLRTEKGARLIEDFAEARRGGAVFKPAQERGGGTRPTNSYSNG
                     ARSTSPLQPWCRRCLPNGPWRELMRTAVYVRVSTQRQSQAQTIDQQLARLRAHLAAHG
                     EELQSEQIVRDDGYSGASLNRPGLDHLRDAVEAAAFERSLVTTPIGWLAIMCI"
BASE COUNT          212 a          319 c          310 g          208 t
ORIGIN      
        1 ccggatcatg gcgatcagcg ggcataagac catgtcggcg tttaagcgtt accacacgat
       61 tgacggacag gatttacagc aagcgatcgg ccagttggac acctatatgg acaccgaggc
      121 ccgcgcctca acacaccagc ccgcccaacc tcttgaaatc acttagtgcc cccgtagctc
      181 aggcggatag agcaagggat tcctaatccc tgtgccggga gttcaagtct ccccgggggt
      241 acttcttttt caaatagttc tgaggatcat cgcatgcatc aaggagccgc tcgatctctt
      301 ccagttcgag gtagcgcaac cgcccaggag gctccttcgg cagcttgacc gccttcgtca
      361 gcatgtgctt gagtaagggt aactcccgat tgacagtacc tgccttgacc gcttggctgc
      421 gctgcacttt gtacggttct gtcaactttc acgccatcag ggtgaggcga gtagcatgga
      481 gcgctcgggc ctggggtata cggtggccat caggcccatc aattgggtga accgtgcctg
      541 atggatcgac cgccgctgcg ccagtgagag ggctgggcgg cggtgtacct gcggacggaa
      601 aaaggcgcgc gcctcatcga agactttgca gaagcgcgcc gcggtggtgc tgtgtttaaa
      661 cccgcccagg agcgcggcgg cgggaccagg cctaccaact cttactccaa tggcgcacgc
      721 tcaacgagtc ccctccagcc ttggtgtcgc cgctgtctgc ccaacggccc ttggagggag
      781 ctgatgagaa ccgccgttta tgtccgcgtc tcgacacagc gtcaaagcca ggcccagacc
      841 attgaccagc aactagctcg cctgcgagct cacctggcag cccacggcga agaactccag
      901 tccgagcaaa ttgttcgcga tgatggctac agtggggcca gcttgaatcg tccaggcctg
      961 gatcatctcc gggatgcggt cgaagcggcg gcatttgagc gcagccttgt gacgaccccg
     1021 atcggctggc tcgcaattat gtgcatcag
//
LOCUS       DASQSL010001449         1237 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_170451, whole genome shotgun sequence.
ACCESSION   DASQSL010001449 DASQSL010000000
VERSION     DASQSL010001449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1237
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170451"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..833
                     /locus_tag="VE844_14865"
     CDS             <1..833
                     /locus_tag="VE844_14865"
                     /inference="COORDINATES: protein motif:HMM:NF013465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HZC02580.1"
                     /translation="IKALSQCELYLEIGLELEIGWAPVLLAQARNRQILPGAIGHLDA
                     STAITPLDVPTGSIDRSMGDVHPRGNPHYLLDPLNGLKVARLIKAKLSALRPQAAAYF
                     DGRLNGFVDKLSTALIGPQLAAKYRIEEVEKLMRLYELGKLTPYLGSQGETELLGGWL
                     GVMRPYFGAKAIDDHAMWPYFARRFGIQIISHIEPKPGIPPTMSHLQRLIEQMRTLGI
                     KVVITAAYYDPRHAQFITKNTGAIAVPLAHMAGARPGTENYLGLIDYNVRQLALAFQR
                     "
     gene            830..>1237
                     /locus_tag="VE844_14870"
     CDS             830..>1237
                     /locus_tag="VE844_14870"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZC02581.1"
                     /translation="MKTGDILLEDRALSLGYGQTPVLERIDFTVRAGEFWFIVGPNGS
                     GKSTLLKAIVGVLTPEHGEIRLDPIVLNRAQIGFVPQSCRFNPSLPTTIREFVLLGLV
                     GVKTNRKEAAERLGWALDAVDLQGMERCDYWSLS"
BASE COUNT          249 a          360 c          350 g          278 t
ORIGIN      
        1 ttatcaaggc cctaagccag tgtgaactct atcttgagat cgggcttgag cttgagatcg
       61 gctgggcgcc ggtattgctc gcccaggccc gcaaccgtca aattcttcca ggcgcgatcg
      121 gccacctcga tgcctcgacc gccattaccc ctctcgatgt ccctaccggg tccatcgacc
      181 gttcgatggg ggatgtccat ccgcgtggca atccacatta tctcctggat cccctcaatg
      241 gccttaaggt ggcgaggctt attaaggcca agctctccgc cttgcggcca caagctgcgg
      301 cctattttga tggccggctc aatggctttg tagacaagct ttctacggct ttgatcgggc
      361 cgcaattggc agccaaatac cgcatcgagg aggtagaaaa gctcatgcgc ttgtatgaac
      421 tgggcaagct cactccctac ttagggagcc agggagagac tgagcttctt ggcggatggc
      481 tcggggtgat gcggccctat ttcggcgcca aggcgatcga tgaccatgct atgtggcctt
      541 attttgcccg ccgcttcggg atccagatca tcagccatat agagcccaaa cccgggatcc
      601 caccgaccat gagccatctg cagcgactca tcgaacagat gcggaccctc ggtatcaagg
      661 tagtgatcac agccgcttat tatgatcccc gccacgccca gtttattact aaaaacacgg
      721 gcgccatcgc tgtgcccctg gcccatatgg cgggggcaag accgggcacc gagaattatc
      781 tcggcctgat cgactataac gtccggcaac tggccctggc atttcagaga tgaaaacggg
      841 cgacatcctc ctagaagacc gcgccctttc tctcggttat ggccaaaccc cggtgcttga
      901 gcgcatcgat tttacggtca gggccgggga gttctggttt atcgtgggtc ccaatggttc
      961 gggcaagagc acattactta aggccatcgt cggcgtgctt acgcctgagc atggagagat
     1021 ccggcttgat ccgatagtgc ttaaccgcgc gcagatcggt tttgtgccac aaagctgccg
     1081 tttcaatccc agcctcccta cgacgatccg cgagtttgtc cttctggggc ttgtaggggt
     1141 aaaaaccaat cgtaaggagg cggctgagcg cctcggctgg gcgcttgatg cggtggatct
     1201 gcagggcatg gagaggtgcg attactggtc gctctcg
//
LOCUS       DASQSL010001450         1230 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_105070, whole genome shotgun sequence.
ACCESSION   DASQSL010001450 DASQSL010000000
VERSION     DASQSL010001450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1230
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105070"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..803)
                     /locus_tag="VE844_14875"
     CDS             complement(<1..803)
                     /locus_tag="VE844_14875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02582.1"
                     /translation="MRGVVKVRTCVSAVTLATKQWGSRQPKRRPSPWVLGAFLVLLAG
                     RSAWAIVTDLTDVELIYDTEVEHADQDELRGLAASGQEEEAFEEAFELGDKLFGTLFN
                     AHDGGGANVGTGQRFTRVPRADLKGPGEWFDHTPSRVTGPNAAACVSCHSLPFEDGAG
                     EPAANVHRDTFRTGIITQFVQRNAPHLFAPGAVQRLAEEMTEELHENREQLSAKACAN
                     PEVPQSQALSAKGINFGVLRGVGTGVPCEVNYDTSLVQGVDFVPNPQKS"
BASE COUNT          240 a          366 c          343 g          281 t
ORIGIN      
        1 ttggatttct gggggttggg cacgaagtcg actccttgca cgagggaggt gtcgtagttg
       61 acttcgcagg ggacgccggt accgacaccg cggaggacgc caaagttgat cccctttgcg
      121 ctcaacgctt gtgactgcgg cacttccggg ttcgcgcacg ctttcgcgct cagttgctcg
      181 cgattctcgt gcagctcctc cgtcatctcc tcagcgagcc gctggaccgc ccccggcgcg
      241 aacaggtgtg gcgcgttgcg ctgaacaaat tgggtgatga tcccggtgcg gaacgtatcg
      301 cgatgaacgt tcgcggctgg ctctccggcc ccgtcctcga acggcaagga atggcatgag
      361 acacaggctg ctgcgttggg cccggtgacc cggctgggag tgtgatcgaa ccactcgccc
      421 ggtcccttca agtccgctcg gggcacgcga gtgaaacgct ggccggtgcc gacgttcgcg
      481 ccgccgccgt cgtgcgcgtt gaacagcgtt ccgaacagct tgtctccgag ttcgaaggcc
      541 tcctcgaagg cctcctcctc ctggccggag gccgcaaggc ctctcagttc gtcctggtcc
      601 gcgtgctcca cctccgtgtc gtagatgagc tccacatccg tcaggtccgt cacgatggcc
      661 cacgcagatc ttcctgccaa taagaccaag aaggcaccga gcacccaggg cgagggccgt
      721 cgtttcggct gtctggaacc ccactgcttc gtcgccaaag tcaccgccga gacacacgtt
      781 ctgactttca ctacgccacg catgacgcac ctccttagaa agtgttttta tcattcgtct
      841 tatagcttcg tctatattat agctcaggta ttatatttgt gcaaattata tttaagacta
      901 aaattttata cttggggtta aaggtcgtac actggttgga agtgcttgaa gcctgcattg
      961 cggcgagcgc acgcgctgtg cccgagtcac gaatcggctt agccctatgc tcgattccga
     1021 gggagatgct gcacaccgag cctttaccac cccctgcatg ataatgaaca tttatccaat
     1081 ttctgagggc atagatgaat aagcgtattc ctaagcagcc ttctacgctg gtcgaactcc
     1141 ttcgctggcg agcacttcat cagccggagc gtcaggccta tacattctta acggatgagg
     1201 aacaaaaaga ggttcatttg acctatgagg
//
LOCUS       DASQSL010001451         2078 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_115955, whole genome shotgun sequence.
ACCESSION   DASQSL010001451 DASQSL010000000
VERSION     DASQSL010001451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2078
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115955"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..543)
                     /locus_tag="VE844_14880"
     CDS             complement(<1..543)
                     /locus_tag="VE844_14880"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HZC02583.1"
                     /translation="MPLFRYKAVGADGRIAEGDLEARSQTAAIDRLQTMGYVPIRADE
                     ITAAQADKRSLRRPLFGSRQITQSQVAVLTQELATLLRAKLPLDRALELLIELSPNAR
                     VQHLVTQIREQVHDGATLSAAMETQKGAFSRLYLNMVRAGEAGGAVDSVLMRLAEYME
                     RARELRDTVSSALIYPAFLLG"
     gene            complement(547..>2078)
                     /gene="gspE"
                     /locus_tag="VE844_14885"
     CDS             complement(547..>2078)
                     /gene="gspE"
                     /locus_tag="VE844_14885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018972703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="type II secretion system ATPase GspE"
                     /protein_id="HZC02584.1"
                     /translation="LATLLKAPLIKASDYPDVPLYEEQISAKFLKAVKALPVHESEGE
                     LFLAMAVPQDTYVISACELACGKRVKACIGNPSEILAAIDRLYGNGKTALDQIVEDIE
                     ERQDGSEQEDIERLKDLASEAPIVRLVNLLINRAIESRASDIHIEPFENRLKVRYRID
                     GVLHEVEAPPARSTAAVISRIKIMAKLNIAERRLAQDGRIQLRVQGKEIDLRISTVPT
                     LYGESVVMRILDKQSVVFDFKALGFGGDTLKSFLEVLELPHGILLVTGPTGSGKTSTL
                     YATLRKLNTADSKLITVEDPVEYQLEGVNQMQVMPQIGLTFANALRSIVRQDPDVIMI
                     GEIRDLETAEIAVQSALTGHLVLSTLHTNDAGSSLTRLLDMGGQDYLLTSTINGILAQ
                     RLVRMLCIRCRRPYEALPEVIEEMQLAKFTEEQPVRLYQAVGCDHCANTGFWGRTAIM
                     EFLVMSDPIRRLVLKHADGGELQQAAIEAGMQTMYQDGLRKALHGITTIEEVLRVTHV
                     S"
BASE COUNT          415 a          619 c          603 g          441 t
ORIGIN      
        1 cccaagcagg aacgccggat agattaacgc cgagctaacc gtatcccgca gctcgcgggc
       61 gcgttccata tactcggcca ggcgcatcag tacgctatcc actgcccccc ccgcttctcc
      121 ggcgcgcacc atgttgagat aaagccggct aaatgcgcct ttttgcgttt ccatggccgc
      181 cgagagcgta gccccatcat gcacctgctc gcggatctgg gtcactaagt gctgcacgcg
      241 ggcattgggg gagagctcga tcaaaagttc aagcgcccga tccagcggca gtttagcacg
      301 gagtaaggtc gccagctcct gggttagtac cgcgacttgg gattgggtga tttggcgcga
      361 cccgaacagc gggcggcgca gcgatcgctt atccgcttga gcggcggtga tctcatccgc
      421 ccgaatgggc acatagccca tcgtttgcag gcgatcgatc gcggcggttt ggctgcgcgc
      481 ctccagatcc ccttccgcga tccttccgtc ggcgcctacc gccttgtatc tgaacagtgg
      541 catagtttat gacacatggg taacgcgcaa gacttcttcg atagtggtga tcccgtgcag
      601 ggccttgcgc aagccgtctt gatacatcgt ttgcataccc gcctcgatgg cggcttgctg
      661 gagctcgccg ccatctgcat gttttagcac caggcgccgg atcggatccg acatgaccag
      721 gaattccata atcgccgtac gtccccaaaa accggtattg gcgcagtgat cacaaccgac
      781 cgcttgataa agccgcaccg gctgttcctc ggtaaacttg gcaagctgca tctcttcaat
      841 gacctcaggc agggcttcat agggacggcg gcagcggatg cagagcatgc gcaccagccg
      901 ctgggccagt atgccgttga tggtggaggt cagtagataa tcttgcccac ccatgtccaa
      961 aaggcgcgtg aggctgctgc cggcgtcgtt ggtatgcagg gtggacaaca ccagatgacc
     1021 ggtcagcgcc gattgcaccg cgatctccgc ggtctccaga tcgcggatct caccgatcat
     1081 gatgacatcg gggtcctggc gtacaatgga gcggagggca ttggcaaagg tgaggccgat
     1141 ctgcggcatg acttgcatct gattgacccc ttcgagctga tattccaccg gatcttcgac
     1201 cgtgatgagc ttgctgtcag cagtattgag cttacgcaag gttgcataca aggtgctggt
     1261 cttgccactg ccggtgggac ctgtgaccag caggataccg tgcggtaact ccagcacctc
     1321 caggaaggat ttcaaggtgt ccccgccaaa accaagcgcc ttgaagtcga atacgacgct
     1381 ttgtttatcc aagatacgca tgactacgct ctctccatac agcgtcggta cggtagagat
     1441 ccgcagatcg atttccttgc cctgcacccg caactggata cgcccgtcct gggccagccg
     1501 ccgctcggcg atattgagct tggccatgat cttgatgcgc gagatcaccg ctgccgtgga
     1561 gcgcgcgggt ggtgcctcga cctcatgtaa cacgccatcg atgcgataac gcaccttcag
     1621 gcggttctcg aagggctcga tgtggatgtc agaggcccgt gactcgatcg cccggttgat
     1681 aagcaggttg actaagcgca cgatcggcgc ctcactggct aagtccttga gtcgctcgat
     1741 atcttcctgt tcgctgccat cctggcgttc ctcgatgtcc tcgacgatct gatcgagtgc
     1801 agttttaccg ttaccataga ggcgatcaat cgcagcgagg atctccgaag gattgccgat
     1861 acaggccttc acccgcttgc cgcaggcgag ctcacaggcg ctgatgacat aagtgtcctg
     1921 aggtaccgcc atagcgagga agagctcacc ctcgctctca tggaccggaa gggccttgac
     1981 cgctttgaga aacttggccg agatctgctc ctcatagagc ggtacatcgg gatagtcgct
     2041 ggccttgatt aacggcgcct tgaggagagt cgccaggg
//
LOCUS       DASQSL010001452         1292 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_147545, whole genome shotgun sequence.
ACCESSION   DASQSL010001452 DASQSL010000000
VERSION     DASQSL010001452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1292
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147545"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            122..1264
                     /locus_tag="VE844_14890"
     CDS             122..1264
                     /locus_tag="VE844_14890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004177414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC02585.1"
                     /translation="MAHGTIILAQVLKLISKSHIELLDHMHGTGRPSRMLSRWSQFGA
                     LVFAQLAGRHSLRDVVSSLAAQAQALAPFGLTPPKRSTLAEANERRPAALYQAIFATP
                     YERCRAVAPGHRFRFKSPLYSLDSTTISLCLSLFPWARFRKAKGAIKLHTLLDHAGHL
                     PAFVMLTEGKRSDIAVARGLKLPKGSIVAMDRGYIDYRFLFRLTQDGVYFVTRQKVNV
                     RFKVTERFEVDWHRGLTSDHNVVLLGQKANAYPTVLRRVGYRDPETGKHYVFWTNAFQ
                     LGAATVAAIYKQRWQIELFFKAIQQNLNLKMFLGTSENAVMTQIWVALITYLILAFLR
                     FKAGLGISFQQMLRLLQINLFDRRNLLDLCTPQPCDDARGQLLRAV"
BASE COUNT          250 a          412 c          364 g          266 t
ORIGIN      
        1 tgggttgtgt caggcaccac tgctgtccgg ctaaggaaca agcaagaagg ctcgaagagc
       61 cttgcctgtt ggtagaatgg ggtgatcgcg aacccgccct accaacagga ggattcgagc
      121 catggctcat ggtacgatta ttcttgccca ggtgctcaaa ttgatctcca aatctcacat
      181 cgagttgttg gaccacatgc acggtacggg acgtcccagc cggatgctca gccgatggag
      241 tcagttcggc gccttggtct tcgcccagct ggcaggacgc cacagcctgc gggatgtggt
      301 tagctcccta gccgcccaag cccaggcgct agctcccttc ggtctgaccc ctccgaagcg
      361 ctccactttg gccgaggcca acgagcggcg gccggccgca ctgtaccaag ccatctttgc
      421 caccccgtat gagcgctgcc gggcggtggc gccggggcac cgtttccgct tcaaaagccc
      481 tctctattcc ctggacagca ccaccatctc cctctgcttg agcctcttcc cctgggcccg
      541 cttccgcaag gccaagggcg ccatcaagct gcataccctc ctcgaccatg cgggccacct
      601 gccagccttt gtgatgctca ccgagggtaa gcggagcgat attgccgttg cccgtggcct
      661 gaaacttccc aagggcagca tcgtcgcgat ggaccggggc tacatcgact accgttttct
      721 gttccgtttg acgcaggacg gggtgtactt cgtcacccgc cagaaggtca acgtgcggtt
      781 caaggtgaca gagcgctttg aggtggactg gcaccgcgga ttgacctcgg accacaacgt
      841 ggtcctgttg gggcagaagg ccaatgccta ccccactgtg ctgcggcggg tggggtaccg
      901 ggacccagaa accggcaagc attacgtgtt ctggaccaat gccttccagc tgggcgccgc
      961 cacggttgcg gcgatttaca aacagcggtg gcagatcgaa ctcttcttca aagcgattca
     1021 acagaacctg aatctcaaga tgttcttggg cacctcggag aacgccgtca tgacccaaat
     1081 ctgggtcgcg ctgatcacct acctgatcct ggcgttcctg cggttcaagg ctgggctggg
     1141 catctcgttc cagcagatgc tgcgcctcct ccaaatcaac ctgttcgacc gacgaaacct
     1201 gcttgatctg tgcacccctc aaccctgtga tgatgccaga ggtcagctat tacgggccgt
     1261 ctaacctagc cggacagcac tgatcaattt cg
//
LOCUS       DASQSL010001453         2590 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_133342, whole genome shotgun sequence.
ACCESSION   DASQSL010001453 DASQSL010000000
VERSION     DASQSL010001453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2590
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133342"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            238..1011
                     /locus_tag="VE844_14895"
     CDS             238..1011
                     /locus_tag="VE844_14895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HZC02586.1"
                     /translation="MATEQHVVRVAAVGDVHCKKTSQGELQPLFQQISDSADILLLCG
                     DLTDFGLPEEAQVLAKELTSGLKIPAIAVFGNHDFESGRVQEVQDILSEAGVKVLDGD
                     SHEVHGIGFAGVKGFAGGFGERALAPWGEESIKRFVHEAIDEALKLERAISRLQTAQR
                     LVVLHYSPIQATVEGEPPEIFPFLGSSRLEEPLNRYPVTAIFHGHAHHGSPEGRTQSD
                     APVYNVALPLLRRVFPDQPPFRVESFPVIPPSELEGRGE"
     gene            1123..1902
                     /locus_tag="VE844_14900"
     CDS             1123..1902
                     /locus_tag="VE844_14900"
                     /inference="COORDINATES: protein motif:HMM:NF026257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HZC02587.1"
                     /translation="MQFCSWAEDELEPHIYSFYCTALGAIQQSQVPFLVGGAYALARH
                     TGIVRHTKDVDIFTRPEDCERILQVLSAAGYRTELTDPRWLAKAYLGEDFIDVIFSSG
                     NGIAEVDDAWFEHAIEAKIFGLPVQLCPAEETIWSKAFIMERERFDGADIAHLLRAYG
                     ARLDWNRLLERFGVHWRVLLSHLILFGYIYPSERESIPSSVMDLLIGRLRNEEVPQRT
                     TGRLCQGTLLSKVQYAIDIERWGYQDARLLPLPNKTTPAGV"
     gene            2233..2469
                     /locus_tag="VE844_14905"
     CDS             2233..2469
                     /locus_tag="VE844_14905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012874058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02588.1"
                     /translation="MQKAERMTGTQDVHYNLVSVLYHTLQGAETSVQYISDAEESGDE
                     ELARFFREVQEEDRRRAERAKTLLGQRLSQGGGR"
BASE COUNT          539 a          701 c          821 g          529 t
ORIGIN      
        1 gtcaatgcga tgactggcgg tggcaagaaa agcggttctg gtcgaggcaa agcttgtgaa
       61 tacggctccc gcgaaaaggg gtggcaaaaa gggaggggct gcctcgcgcc ggaggtcctc
      121 cacggccagc tctacgtcga ctaagaccaa gaaaaccgct ggcaaaaccg catcatagcg
      181 agccatcggg tgatcgacga gcggccaagt aaggtgtgcg acagctagga ggggggtatg
      241 gccaccgagc agcatgtggt acgggtggcg gcggtcggtg acgtgcactg taagaaaact
      301 tcgcaggggg agctgcaacc gctgttccag caaatcagcg acagcgccga tattctctta
      361 ctgtgcggag atctcaccga ttttggactg ccggaagaag ctcaggtgtt ggccaaggag
      421 ttaacttcgg gcctgaagat ccccgctatc gccgtgttcg gcaatcacga tttcgagtcc
      481 ggccgggtac aggaggtcca ggatattctc agcgaggccg gggttaaggt gctcgacggt
      541 gatagtcacg aagtccatgg gatcggcttc gctggggtga aaggatttgc cggtggcttt
      601 ggggagcggg ccctggcacc ttggggtgag gagagcatta agcgtttcgt gcatgaggcc
      661 atcgatgaag ccttgaaatt ggagagggcg atctcccgct tacagacggc tcagcgtctt
      721 gtcgtgctgc attattctcc gatccaggca acggtcgagg gggaaccgcc ggagatcttc
      781 ccattcttgg gatccagccg gttggaggag ccgttgaatc gctacccggt gacagcgatt
      841 ttccacggcc acgcgcatca tggcagtcct gaggggcgaa cgcagagcga cgccccggtg
      901 tataacgtgg cgttgccgct tttgcgtcga gtgttccccg accaaccgcc gtttcgcgtc
      961 gaatctttcc ctgtcatacc gccatcggag cttgaaggtc ggggggaata atactgtatg
     1021 tccggggctt cgtaggctct tgcgggcggg acgatagggg agagaggctc acaccggcga
     1081 cgcagcgtat cggtcatgag cacacgagca aaggaatcga ttatgcaatt ctgttcctgg
     1141 gctgaggacg aattggagcc tcacatctat agtttctact gtactgctct cggggccatt
     1201 cagcagtcac aggtgccctt tctcgtcggt ggagcttatg ccttggcccg tcatacgggt
     1261 attgtgcgcc acacgaaaga cgtcgatatt ttcacacgcc cagaggattg tgagcgcatc
     1321 ctgcaggtgc tctcggcagc cggctaccgg accgagctca cagacccacg ttggctcgcc
     1381 aaggcctact tgggagaaga tttcatcgat gtgatcttca gctccggcaa tggcatcgcc
     1441 gaggtcgatg atgcctggtt cgaacacgcc atcgaggcga aaatattcgg gctcccggtt
     1501 cagctctgcc cggcagagga gaccatctgg tcaaaggcct ttatcatgga gcgcgagcgc
     1561 tttgacgggg cggacatcgc tcatctcctg cgtgcttacg gcgctcgtct cgactggaat
     1621 cgcttgctcg agcgcttcgg tgtacactgg cgcgtcctcc tcagccacct cattcttttc
     1681 ggttacatct accccagtga gcgggagagt atcccatcat ccgtgatgga tctactgata
     1741 ggtcgcctcc gcaacgaaga ggtacctcag cggacgacag ggcgactctg tcaaggtacc
     1801 ttgttgtcca aagtgcagta cgccatcgat atcgaacgtt ggggctatca agatgctcga
     1861 cttctgccct tgccgaataa gactacgccg gctggtgtgt aatcattgct gtgagaggca
     1921 ggaggactga ctcctctggg ctctaacact cggaggagtt ggagtgtacg ggaacaagcc
     1981 tatgaaaggg ggtgtaaccc atcgcgatct tgacatgctc tgcatgcggc aaagccctca
     2041 aatctgaggg gaaccgtaga aatctatata gctgtatagt cgccggctgc cggtattacg
     2101 gcgttaagaa ccgggcttcg ggtgtgccga agccctcgct ggctgttacc agcggcgtag
     2161 atcgccactg agcagcctca gttctcgagg tctggaacgg cacaagccct atacgggggg
     2221 ggagccgaaa caatgcaaaa agccgagcgt atgaccggaa cccaagacgt gcactacaac
     2281 ttggtcagcg tcctctatca caccctgcag ggcgccgaga cgtctgtgca gtacatctcc
     2341 gacgccgagg aaagcggcga tgaggagctg gcgcggtttt tccgtgaggt ccaggaggaa
     2401 gaccgtcggc gcgccgaacg ggccaagacg cttctaggac agcgcttgag ccagggaggc
     2461 gggcgctaga cggtacgcct gtagccaaca acgcccctcg gcagcgtcaa gggctcgact
     2521 gtgcctcgaa cgagtcgatc cgccccgagc agcggctttc catggggtgg cggttttgcg
     2581 tcgggtcgag
//
LOCUS       DASQSL010001454         1128 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_133358, whole genome shotgun sequence.
ACCESSION   DASQSL010001454 DASQSL010000000
VERSION     DASQSL010001454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133358"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            190..642
                     /locus_tag="VE844_14910"
     CDS             190..642
                     /locus_tag="VE844_14910"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HZC02589.1"
                     /translation="MATARWEPLRDLIALQNRVNRMFEDVVTNPRRGADQEDMAAGQW
                     TPVVDIFETSENIVIRAEVPGLEQNDLEVEVKDNTLILQGERRFEEGGNRTYHRVERP
                     YGRFQRVFTLPMTVRQDQVQAMLKNGVLDITLVKEEKAKPKRVQVEIR"
     gene            749..>1128
                     /locus_tag="VE844_14915"
     CDS             749..>1128
                     /locus_tag="VE844_14915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008716755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HZC02590.1"
                     /translation="MATGSTMKRDYYDVLGVKRSAADKDIKKAYRRLAREHHPDLNPG
                     NKEAERRFKEISEAYHVLSTPDLRKKYDQLGHRAFEAGGGGASGFEATDFGPFEGRDF
                     GFGKGGGFSDLFENLFGQRREAQTR"
BASE COUNT          268 a          291 c          369 g          200 t
ORIGIN      
        1 agcgatggtg aaccacaggc cactggtggc aatgccggcg gccaggcccc tggcggcggg
       61 cgtgacgatg tggtggacgc cgagtttgag gaaacagaca agtcggatcg acgctaacca
      121 acaccgagac ctaatatacc accgccccct agggggcggt ggtgagggcg gtcagaaagg
      181 gaaaacgcca tggcaaccgc acgctgggaa cccctgcggg atctcatcgc gctccaaaac
      241 cgagtgaatc gcatgttcga agatgtggtg acgaacccgc gccggggggc cgatcaggag
      301 gatatggcgg ccggtcagtg gactccggtg gtcgatatct tcgagacgtc ggagaacatc
      361 gtgatccggg ccgaggtccc aggcctcgag cagaatgatc ttgaggttga ggttaaagat
      421 aacactctaa tccttcaggg agaacgtcgg tttgaggaag gcggaaatcg cacctatcac
      481 cgagttgagc gcccctatgg acgcttccag cgtgtcttca cattgcccat gacggtgcga
      541 caggatcagg ttcaggccat gttgaaaaac ggtgtgctcg acatcaccct agtgaaggaa
      601 gaaaaggcga agcccaagcg cgtccaggtg gaaattcgtt aagagggctc ccagcgtctg
      661 ctggtgcatc tgacctccat attgcctgta ggtgagggca ggaacaccat gcagactgtg
      721 tgacaatcga ggagctgagg acagaactat ggcgactggg tcaacaatga agcgtgatta
      781 ctatgacgtg ttaggtgtca agcgctcggc cgcagataag gacatcaaga aagcctaccg
      841 gaggctggcg cgggaacatc atcccgacct gaatccgggc aacaaggagg ccgaacgtcg
      901 tttcaaagag atctcggaag cctatcacgt cctcagcact cccgacctcc gtaagaagta
      961 tgaccaactg ggccatcggg ctttcgaggc tgggggcggc ggcgccagtg ggtttgaagc
     1021 gaccgatttc ggcccgttcg aggggcggga tttcgggttt ggcaaagggg gaggctttag
     1081 cgatctcttc gagaacctgt ttgggcagcg gcgcgaggca caaacccg
//
LOCUS       DASQSL010001455         1734 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_147576, whole genome shotgun sequence.
ACCESSION   DASQSL010001455 DASQSL010000000
VERSION     DASQSL010001455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1734)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1734)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1734
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147576"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            149..1600
                     /locus_tag="VE844_14920"
     CDS             149..1600
                     /locus_tag="VE844_14920"
                     /inference="COORDINATES: protein motif:HMM:NF033517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HZC02591.1"
                     /translation="MDTQPPLPPDIWDRTPPEARACIVGLAARVAALESTVQELTERL
                     SQDSSTSSRPPSSDPPERKRPHRRRQPSGRRPGGQPGHPGQTRRLMPVTDVDKVRVLK
                     PENCARCAQPLIGDDPLPYRHQVVEIPPLRPVVTEYQLHRLTCLCCGETTQAALPLGV
                     PTGVVGPRAQAVAALCTGADRLSKRTTPRVLEDLFGLSVSLGTLSNLEAATTEAVAAP
                     IEAARTYVQAQSSAHLDETSWREGSQRAWLWVAATTWVTVFLVRLSRGGEVARELLGQ
                     TFSGILVTDRWSAYNWYPVRWRQLCWAHLLRDFEAMISRGGKSQEIGEALKSQAHQMF
                     HWWHRVRDGTLSRSSFRSYMSPVRRQVEQLLEAGVTCGVSKTEGMCRDMLKRRQALWT
                     FVHLEGVEPTNNTGERAIRPGVLWRKGSFGTHSPQGSRFVESMMTVVGTLKQQQRNVL
                     DYLTAACEATLRDEPAPSLLPRSRKDPSDPMVV"
BASE COUNT          335 a          476 c          545 g          378 t
ORIGIN      
        1 aagatcaccg ttttttttcg tcagtgggca ggaaaccgtg catttttttc taccaaacga
       61 ttgtttgata atgtatactt tatgagtaac cgttcaagta gtccaaatct agttgccagg
      121 tgggttgtcg atcgcgtaag atcggctcat ggatactcaa cctcccttac cacccgatat
      181 ctgggatcgc actccgccgg aggctcgggc ttgtattgtg ggacttgccg cccgcgtagc
      241 cgccctcgaa tccacggtgc aagagttgac agagcgactg agtcaagatt cgtccacctc
      301 ctcgcggccc ccgtcgagtg atccgcctga gcggaagcga ccgcaccgcc gtcgtcaacc
      361 cagtgggcgt cggccgggtg gacagcctgg acaccccggc caaacgcgga ggttgatgcc
      421 ggtgacagac gtcgataagg tccgagtcct caagccggag aattgcgccc gttgcgctca
      481 acctttaatc ggcgacgacc cgctgccgta tcggcaccag gtggtcgaga ttccccccct
      541 tcgtcccgtg gtcacagagt accaattgca tcgcttgacc tgtctctgct gcggtgagac
      601 gactcaagca gccttgccac taggggtccc gacaggggtg gtaggtccgc gcgctcaagc
      661 ggttgcggct ctctgtacgg gggccgatcg tttatccaag cgcaccaccc cgcgggtgct
      721 tgaggatttg tttggcttgt ccgtgagcct gggaaccctc agcaacctgg aggcggccac
      781 gaccgaggcg gtagcggccc ccatagaggc agcgcgcacc tacgtgcagg cacagtcgag
      841 cgcccacctg gacgaaacga gttggcgcga aggcagtcag cgtgcctggt tatgggtcgc
      901 ggcgacgacc tgggtgaccg tctttttggt gcgcctgtca cgaggtggag aggtggcgcg
      961 tgagctgttg ggtcaaacct tttcgggcat cttggtgacg gatcgctgga gtgcttataa
     1021 ctggtatccg gttcggtggc gccaactgtg ttgggcgcat ctgctacggg actttgaagc
     1081 catgatcagt cgtgggggca agtcccagga gatcggtgag gcactcaaga gtcaggcgca
     1141 tcagatgttt cactggtggc atcgggtgcg ggatggcacc ttgagtcgat cgagctttcg
     1201 tagctatatg agccctgtac gacgacaagt cgagcagctg ttggaagcgg gtgtgacgtg
     1261 cggcgtgtcg aaaactgagg gcatgtgtcg agacatgttg aagcgtcgcc aagcgctgtg
     1321 gacgtttgtc caccttgagg gtgtggagcc gacgaacaat acgggtgagc gggccattcg
     1381 accgggtgtg ttgtggcgca aaggcagttt cggtacccat agcccacaag gctcgcgctt
     1441 tgtggaatcg atgatgacag tcgtgggcac attgaagcag cagcagcgaa acgtcctgga
     1501 ttacctcacg gcagcatgtg aggccacttt acgcgatgag cccgccccat ccttgctccc
     1561 taggtctcga aaggacccat cagatccaat ggtagtatag tccttgacct cgcgagatga
     1621 cctgaacggt tacctgatgg gtatggcgca aggcctcctg catcttctcg tgcgcggggt
     1681 cgtgtatgcg aaccgtgctg ttaattcaga ctgcctctaa acgcggtatg atca
//
LOCUS       DASQSL010001456         1275 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_198131, whole genome shotgun sequence.
ACCESSION   DASQSL010001456 DASQSL010000000
VERSION     DASQSL010001456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198131"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(80..772)
                     /locus_tag="VE844_14925"
     CDS             complement(80..772)
                     /locus_tag="VE844_14925"
                     /inference="COORDINATES: protein motif:HMM:NF019149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZC02592.1"
                     /translation="MKTNKPSDLTLHEIMSLLDRTRPEGERVDEALPCSEHAIRVMSR
                     ILQEQGLTVVDADGLQHVVREAFLDGWCKISKYLEVYGGSALAQKVTGLSTRLERVEA
                     TLSTLTSNSSGKLTGEAAREATSITDESTDKSRGEVVVALSETPLPPVAELTDMLTET
                     PAPQTPAKLPLKRVAALSRQAKKLSAQGVSQKEIARRWNAEGIPTLSGIGQWHGSTVK
                     HMIEKHGRVEAE"
BASE COUNT          255 a          354 c          365 g          301 t
ORIGIN      
        1 ggatccaatc ccaccgttgc aaaagaacgt aagcgtgtag ctaaacgcac ctgtggatag
       61 cccagcgccc cacggtcact cattccgctt caacccgccc atgcttttct atcatatgct
      121 tgacagtcga cccatgccat tgccctatgc ctgaaagggt gggaataccc tcggcattcc
      181 accgccgggc aatctccttc tggctcaccc cctgagcaga cagtttcttg gcctggcgag
      241 atagggcagc tacacgtttg agggggagtt tggcgggagt ttgaggcgct ggcgtttctg
      301 ttagcatatc ggttagctct gccacagggg ggagcggggt ctctgaaagt gcaaccacta
      361 cctcccctcg ggacttatct gttgactcat ctgtaatgct ggtagcctca cgtgcagcct
      421 cacctgtgag cttaccactg gaattactgg taagggtgga aagtgttgcc tctacccgtt
      481 cgagccgggt ggaaagccct gtgactttct gtgccagggc actgccgccg tacacctcaa
      541 gatatttaga aatcttgcac cagccgtcaa ggaaggcctc ccggaccacg tgttgcaggc
      601 cgtcggcatc gaccaccgtc agcccttgct cttgcagtat cctcgacata acccggatgg
      661 cgtgctcaga gcaaggcaag gcctcatcga cccgctcgcc ttcggggcgc gtgcggtcca
      721 agagcgacat tatttcgtgg agagttaaat cggagggttt attggttttc atggagcacc
      781 tcccgggaat tgaatagcca ggtcacgcgc gttgaagatg gggataagtt ctgtagtcat
      841 ggctgactcc tatgggtttt cttaatcaaa cataaggtcg ggagctaaga gccgcccata
      901 gacggccagg cctattcccc ttgcgggtgt tttattagcc tactcccgac atggaaatcg
      961 ggcggatggc gggcataaaa aaaccgcaag gctttcgggt gcggtgaacc gccatgggag
     1021 gagtctctta ggctccgtta catgcagcct agcccacggg gggtggggtg tcaattggga
     1081 agttggttga gcgggcaccg ttttcttacc cctctccccc ctgtatgtcc ctcaaacgcc
     1141 tcgcttatcg gaatgaggca ggtccagcgc catcgctttg aggctcagga atctggattc
     1201 gtaggtttcg gcctggcctt ttcgtatgcg ggcttcctca taggcgttat cgatggatgg
     1261 ggaacccgcg aggac
//
LOCUS       DASQSL010001457         1830 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_160618, whole genome shotgun sequence.
ACCESSION   DASQSL010001457 DASQSL010000000
VERSION     DASQSL010001457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1830)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1830)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1830
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160618"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..246)
                     /locus_tag="VE844_14930"
     CDS             complement(<1..246)
                     /locus_tag="VE844_14930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02593.1"
                     /translation="MARLLDLAQEARARLIASRSALSVEEILRAIIKANAELDLEGMA
                     RFMSRDPNLVIYTINGRIYRGWQELAPDMEEEFRSVER"
     gene            complement(498..1493)
                     /locus_tag="VE844_14935"
     CDS             complement(498..1493)
                     /locus_tag="VE844_14935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013033455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HZC02594.1"
                     /translation="MNGFRAFRIYQAGGKVAGRVETLTLADLTPGEVVLRAAYSSINY
                     KDALGATGAGKILTRFPLVGGVDVAGRVEASTDPRFKEGDPVLATGYDIGVGHDGGYA
                     ERVRLPAEWVVPLPEGLSLFEAMALGTAGFTVALCIQRLEDNGQRPENGPIVVTGATG
                     GVGSLAVDILSGLGYEVVALTGKDTEHEYLRALGARAVLDRKTLDLGSRPLEKAQWAG
                     AIDNVGGGVLAWLTRTVKPWGNIAAVGLAGGSEIHTTVMPFILRGVSLLGITSAGCPA
                     ALRYKLWPRLATDLRPPHLASIVTEVVELEDLPRVFAAMLEGRVRGRTVVKLGGE"
     gene            1581..>1830
                     /locus_tag="VE844_14940"
     CDS             1581..>1830
                     /locus_tag="VE844_14940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005708599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HZC02595.1"
                     /translation="MKKIVAGLLVLFLPVTTGWADFNEGAVAYAMGQYGKALEILVPL
                     AESTNHPYAQYYLGVMYTNGQGVKQDFAEAAKWYSRAAK"
BASE COUNT          415 a          564 c          478 g          373 t
ORIGIN      
        1 gcgttccacg gaccggaatt cttcctccat gtccggggcc agctcctgcc agcctcgata
       61 tatcctcccg ttgatcgtgt agatcacgag attagggtcc cggctcataa atctggccat
      121 cccctccagg tccagctcgg cattggcctt gatgatagcc ctcagtatct cctccaccga
      181 caaagccgat cgggaagcga taagtctagc ccgtgcttct tgcgccaagt ccagtaagcg
      241 agccatactt tgatcccatg cgtgatagag gtcttggctg aattgcgtgt agctagagca
      301 tgggaaaaca cctaaggtca ggatggagag tatgaatggg aagttatgat tcatgttacc
      361 gtgaaaatac ttttcattat ccggggtggc tgaaacagcc atgacaggtt aggcttgcca
      421 gcttatgcag tagcttgagt ttattgaatg ccctgacacg agccggtatg ctggaatcga
      481 agcgagcttc aatcctctca ctctccccca agcttcacca ccgtcctccc tctcacccgc
      541 ccctcaagca tggcagcgaa cacgcgcggc aaatcctcaa gctccacgac ctccgttaca
      601 atcgaagcca ggtgaggggg tcggagatcg gtagccaacc gtggccagag cttatagcgc
      661 agcgccgcgg gacaaccggc ggaagtaatg ccgagcaggc taacgccgcg caggataaac
      721 ggcattaccg tggtatggat ctcgctgcca ccggccaatc ccaccgcggc gatatttccc
      781 caaggtttca ccgtgcgggt gagccaggcc agcactccgc ccccgacatt gtcgatcgcc
      841 ccggcccatt gggccttctc taacggccgg ctcccgagat ccagggtttt cctatcgagg
      901 acagcgcgcg cgccgagagc gcgaagatat tcatgctctg tatctttacc ggtgagggcg
      961 accacctcat agcccaagcc tgagagaata tcgaccgcaa ggctgcccac gcctccggtt
     1021 gcgccggtga ccacgatggg accgttttca ggccgttggc cgttatcctc caggcgttgg
     1081 atgcaaagtg cgacggtaaa tcccgcggtc cccaaggcca tggcctcaaa cagcgacagc
     1141 ccctctggca aaggcaccac ccattcggcg ggcagccgga cccgctcagc atagccgccg
     1201 tcatgcccca caccgatatc gtagccggtg gccagcaccg gatcaccctc tttaaaacgg
     1261 ggatcggtcg aggcttctac tctccccgcg acatcgacgc ctcccaccag aggaaagcgc
     1321 gtcaagatct tacctgcccc cgtagccccc agcgcatctt tatagttgat gctggagtag
     1381 gctgcgcgga gcactacctc acccggtgtc agatcggcca gggtcaaggt ctctacccgc
     1441 ccggccacct taccgcccgc ttgatagatc cggaatgctc gaaaaccgtt catgactcac
     1501 actatcgtgt caaagtttaa tgaaagatgc tatttttaac ccatcgggtc tttatacact
     1561 attaatcaaa ctcaacggta atgaaaaaaa tagtcgcggg ccttttagtg ctctttttac
     1621 cggtcaccac cggctgggca gactttaacg agggagcggt agcctatgcg atggggcaat
     1681 acggcaaggc cctggagatc ctggtaccgc ttgcggagag caccaatcat ccctatgcgc
     1741 aatactacct gggagtaatg tataccaacg gccaaggcgt taaacaagac tttgccgaag
     1801 cagccaaatg gtatagcagg gcagccaagc
//
LOCUS       DASQSL010001458         1119 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_116028, whole genome shotgun sequence.
ACCESSION   DASQSL010001458 DASQSL010000000
VERSION     DASQSL010001458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1119
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116028"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..211)
                     /locus_tag="VE844_14945"
     CDS             complement(<1..211)
                     /locus_tag="VE844_14945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02596.1"
                     /translation="MSKGEGGFLSLALVVRERESRDFAAATPKASAGEQSDDFLSHVF
                     PIRRLSNKSEARMSEPMNSHGPLVAR"
     gene            complement(208..594)
                     /locus_tag="VE844_14950"
     CDS             complement(208..594)
                     /locus_tag="VE844_14950"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family glutamic-type intramembrane
                     protease"
                     /protein_id="HZC02597.1"
                     /translation="MDRLQDRWNALEAGIIVGLVWAIWHVVPLAEAHRAPTWIAWQCL
                     GMVPFRILIVWIYNNTGRSVFATIVFQATANVSQFSFPNHGSHYDPRVAGLILAFTAA
                     MVVFLWGPQTLARYRFARSRGAEAMR"
     gene            complement(598..828)
                     /locus_tag="VE844_14955"
     CDS             complement(598..828)
                     /locus_tag="VE844_14955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02598.1"
                     /translation="MKELLKRAVDYGKIGRKIWYVPILCLWPTMMVLAYALMCLTGAP
                     LPDEPRFSMLIVPLLFVVFLVSATVEQLGWQG"
     gene            complement(928..>1119)
                     /locus_tag="VE844_14960"
     CDS             complement(928..>1119)
                     /locus_tag="VE844_14960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02599.1"
                     /translation="DRLLAHAPGRAGRITALAGSVWGGQEIMYIRTSASRSPWTFFLL
                     VFVLSVPFWSIGPMAEQCL"
BASE COUNT          251 a          351 c          316 g          201 t
ORIGIN      
        1 ccctggcgac cagcggcccg tggctattca tgggttcgga catacgagcc tcgctcttgt
       61 tggacaagcg tcgaatggga aacacgtgcg atagaaaatc atcactctgc tcgcctgcag
      121 acgcctttgg cgtagctgct gcgaagtctc gcgattcccg ttcccgcaca acgagtgcca
      181 gagataagaa gccgccctcg cccttgctca tctcattgct tccgcccccc tcgaccgggc
      241 gaatctgtac cgggccagcg tttgcggacc ccacaagaac acgaccatcg cggccgtgaa
      301 cgccaagatg agcccggcaa cgcgcgggtc gtagtgcgaa ccgtggttcg ggaacgaaaa
      361 ctggctcacg ttggcggtgg cctggaacac gatcgtcgcg aacacgctcc ttcccgtgtt
      421 gttgtagatc cagacgatga ggatccggaa cgggaccatc cccaggcatt gccatgctat
      481 ccaagtcggg gcccgatggg cctccgcgag aggcacgacg tgccaaatcg cccacaccaa
      541 gccaactatg atgccggctt ctaaggcgtt ccaccgatct tgcagccggt cgatagctta
      601 tccctgccag cccagctgct caaccgtagc agaaacgaga aacacgacga aaaggagcgg
      661 cacaatcaac atcgagaagc gtggctcgtc ggggagcggt gcacccgtca ggcacatcaa
      721 agcgtatgcc aagaccatca tggtgggcca caagcagagg atgggcacgt accagatttt
      781 ccttccgatc ttcccgtaat cgacggctct cttcaacagc tccttcacgc cgtcctatcc
      841 cttctccccg tagacgacga tcgaagctgc tatcagcggg ttgacagcct gaagcgcact
      901 gacggggagg ttgatcggga tccccttcta gaggcactgt tcggccattg ggccgatcga
      961 ccagaaggga acggaaagca cgaacaccag caagaagaag gtccaagggg acctactggc
     1021 tgacgtgcga atgtacatga tctcttgtcc tccccagact gaaccagcga gcgccgttat
     1081 tcgcccggcg cggccaggtg cgtgtgcaag aagtcgatc
//
LOCUS       DASQSL010001459         1805 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_78525, whole genome shotgun sequence.
ACCESSION   DASQSL010001459 DASQSL010000000
VERSION     DASQSL010001459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1805
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78525"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(146..1432)
                     /locus_tag="VE844_14965"
     CDS             complement(146..1432)
                     /locus_tag="VE844_14965"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC02600.1"
                     /translation="MPTPIAPRISLPQNARANLQALARAHSTPQTLALRARIILKADE
                     AASPTNLKIAHALGCSNLTVGKWRRRYHALGFAGLQDAPRPGRPKTIASPTRVQVISV
                     ASTLPQDQNRSVTRWTLNEIVTALLETLGKGAISRSSIWRILEDVDLKPHKSEYWLNS
                     HDEDFDAKAQPICQLYVGALEAYAQGRLVICCDEKSGMQVLERKAPTQSAKPGRRERR
                     EHEYIRHGTRVLINSLAVATGQIAWTLGATRKAPDFVAHLKRAYQRLPRMKRYDWVMD
                     NLNTHWSLEVCRLVARWCGVPFEPHKLKKGPQRRAFLSDSSHHHVFHFTPKHGSWLNQ
                     AELFFGVLQRRFLARGSFASIKDFERRLERFLKDYNARHAHPYRWTYTGEPLVRDTPF
                     SRTRRQKCHGRAYFSPRPKRFQRLFYAPRPYRRLAT"
BASE COUNT          376 a          477 c          532 g          420 t
ORIGIN      
        1 cgtcaccggc aatgccgccg gcataaaagc gaaatgtcac cgcaccttgg ctttgctgct
       61 cgatctcgtc attcatctcc tgcatcaaat tcatccaagg cgaaccctcg ggcgctagta
      121 gaccgtttcg taagtccttt ataagttatg tggccagacg ccggtaaggc cttggcgcat
      181 agaatagccg ttggaatcgc ttggggcgtg gactaaaata agcccgtccg tgacacttct
      241 gacgccgggt gcggctgaac ggtgtgtcgc gtaccagcgg ctccccggtg taagtccaac
      301 ggtagggatg ggcatgacga gcgttgtaat ctttcaaaaa gcgctctaat cgacgttcaa
      361 agtctttgat gctggcaaag ctgccacggg ctaaaaagcg ccgttgtaac acgccaaaga
      421 acaactccgc ctgattgagc caggagccgt gtttgggggt aaaatggaac acatgatggt
      481 ggctggagtc gctcagaaaa gcgcgtcgtt gtgggccttt tttaagcttg tggggctcaa
      541 agggcacccc acaccagcgc gccaccaagc ggcacacctc caaactccaa tgggtgttca
      601 agttgtccat cacccagtca tagcgcttca tgcggggcaa gcgctggtag gcgcgtttga
      661 gatgagccac aaaatcaggg gctttgcgag tggcaccgag ggtccaagca atctgccccg
      721 tggccaccgc cagcgagttg atcagcacgc gcgtgccgtg gcgaatgtat tcatgttcgc
      781 ggcgctcgcg ccgtccgggc tttgccgact gggtaggtgc ctttcgttca agcacttgca
      841 taccgctctt ttcatcgcag cagatcacca agcggccttg tgcataggct tcaagcgcgc
      901 ccacgtaaag ctgacaaata ggttgggctt tggcatcaaa gtcctcatca tggctgttca
      961 accagtactc actcttgtga ggcttaagat cgacatcttc aagaatccgc cagatgctcg
     1021 agcgactgat ggcgcctttg cctaaggtct caagcaaggc cgtcacgatc tcattcaagg
     1081 tccatcgggt gacgctgcgg ttctggtctt ggggtaaggt acttgccacc gagatcacct
     1141 gcacccgagt aggcgaggcg atggttttgg ggcgccctgg acgaggggca tcttggaggc
     1201 cagcaaaacc cagggcgtgg taacgccgtc gccatttgcc caccgtgagg ttggagcagc
     1261 ccagggcgtg cgcaattttg agattggtgg ggctggccgc ctcgtctgct ttgaggatga
     1321 tgcgggcgcg taaggccagc gtctggggtg tggaatgggc tcgagctaaa gcttgtaggt
     1381 tggcccgagc gttttgaggt aaactgatgc ggggagcaat gggcgttggc atgggtgatc
     1441 tccttgccaa aaggccttga gaattcatcg atcaattgct ccctctatcc taaaaggcac
     1501 tgccccaaaa ggcgaccaga acttataacg tatttacgaa acggactact agtgtcaacc
     1561 aatacagccc atattcttcg gggtccagtc aacccaggcg gcttgagccg cctagctgaa
     1621 tccaccgctc tttaggcggt ggagagttca attccttacg ctttgggatg atgtgatgag
     1681 accgctagtg cgtcgggcgg catttgctct gttgcttttg ggatggtgtt gcgtcacggt
     1741 atccgttagc tttgctggcg actggtttcg tgcggattcg ccgcttgagc tctatgatcc
     1801 tttta
//
LOCUS       DASQSL010001460         1166 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_170543, whole genome shotgun sequence.
ACCESSION   DASQSL010001460 DASQSL010000000
VERSION     DASQSL010001460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1166
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170543"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..607
                     /locus_tag="VE844_14970"
     CDS             <1..607
                     /locus_tag="VE844_14970"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TIGR03619 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HZC02601.1"
                     /translation="QRHPLVVAKMVASLDCLSKGRFLFGVGIGWLKEEFRALGISPER
                     RAQRTCEYLDAMRAVWTQASPAFEGEFCRFPAVKSLPKPVQQPHPPVIFGGNSAPALR
                     RAVYHGDGWFGFNLLPEEAVPCVQQLQQHASEVGRAADDLFIAVAPGEKMPQVTFDAL
                     KQYRDAGVKQVILRLPTASPDRIDAALEAMAENLIVPAQSL"
     gene            644..>1166
                     /locus_tag="VE844_14975"
     CDS             644..>1166
                     /locus_tag="VE844_14975"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HZC02602.1"
                     /translation="MSEQRIGVAVRGNHINDILNMIERAEELGIHAAWMTTGGVRLDS
                     ITVFAAAALRTQRIQLGTSIVPTFPRHPLVMVQQTQVVAQLAPGRFRLGVGPSHRPMM
                     ISMGMNFTSPLGHLREYVQILKAILQQGEVDFDGEFYHAHDKISEPLEVPVMASALQR
                     GSFELCGAEADGAI"
BASE COUNT          237 a          308 c          359 g          262 t
ORIGIN      
        1 gcagcgccat ccgctggtgg tggccaaaat ggtagccagc ctcgattgtc tctccaaagg
       61 ccgctttttg tttggcgtgg gcattggctg gctcaaggaa gagtttcgtg ctctgggcat
      121 ttcgccggaa cgccgggccc aacggacgtg tgaatatctc gatgccatgc gggccgtatg
      181 gacgcaagca agtcctgctt ttgagggcga gttctgtcgc tttccggccg tgaaatcact
      241 tcccaagccc gtgcaacaac ctcatccacc cgtgatattt ggtggcaata gcgcgccggc
      301 gctgcgtcgt gccgtatatc atggtgacgg ctggttcggg tttaacctgc tgcccgagga
      361 agccgtgccg tgcgtccagc agttgcaaca acacgccagt gaggtcggac gtgctgccga
      421 tgacttgttt attgcggtgg cgccaggcga aaaaatgccg caggtaacct tcgatgcgtt
      481 aaaacagtat cgtgatgccg gcgtgaagca ggtgatcttg cggctgccaa ctgcttctcc
      541 agatcgtatt gacgcagcac tggaagcaat ggcggaaaac ctcattgtgc cggcgcaatc
      601 cctgtaaact ctatagatga gtgtggcaaa aaaggggaat cacatgagtg aacagcggat
      661 cggtgttgcc gtacgtggca accacattaa tgatattctc aacatgatcg agcgggctga
      721 agaactcggg attcatgccg catggatgac cacaggcggg gtgcgcttgg atagtataac
      781 ggtgtttgcg gcagccgccc tgcgcacgca gcgcattcaa ctgggcacct cgatcgtgcc
      841 cacctttccc cggcacccgc tggtcatggt gcagcaaacg caagtggtgg cgcagttggc
      901 accggggcgt ttccgcctgg gggtggggcc gagccatcgc ccgatgatga tctctatggg
      961 catgaatttc acctcgccac ttgggcattt gcgtgaatat gtgcaaatct taaaggccat
     1021 tttacagcag ggtgaagtcg attttgatgg cgagttctac cacgcccacg acaagatttc
     1081 cgagcccttg gaggtgccgg tgatggcgtc cgctctgcaa cgtggctcgt ttgaattgtg
     1141 cggtgcagag gcggacggcg cgatta
//
LOCUS       DASQSL010001461         1321 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_12947, whole genome shotgun sequence.
ACCESSION   DASQSL010001461 DASQSL010000000
VERSION     DASQSL010001461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1321
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12947"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(420..560)
                     /locus_tag="VE844_14980"
     CDS             complement(420..560)
                     /locus_tag="VE844_14980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02603.1"
                     /translation="MLKIEGIWYRQCTYCLIWFPVEEIGWSDELLGWLCDEHSLPSRQ
                     PW"
     gene            complement(644..877)
                     /locus_tag="VE844_14985"
     CDS             complement(644..877)
                     /locus_tag="VE844_14985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02604.1"
                     /translation="MAVYTIIRIYEVPAEAQQQATDRMLEALVLHVEKDFHVKDIIRE
                     KVEKGAKPGTWSAVKLAPPAGWLTLLVRQLTGT"
     gene            complement(954..1121)
                     /locus_tag="VE844_14990"
     CDS             complement(954..1121)
                     /locus_tag="VE844_14990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02605.1"
                     /translation="MMKTYHVRVFVPQDIEIRAEDDGQALAKVGQLYQEYYAKVLRGW
                     IEPLEAPQDLE"
BASE COUNT          274 a          413 c          350 g          284 t
ORIGIN      
        1 tcggccttgg caaccttgcg gaattgggcg aaggtgggag cggcttcgat ttcatcttgg
       61 ctacagtgat ccaagaaaat aatcccggtt tttggactcc ggaaagccga gatcctgtgt
      121 ggcgtctacg tccagaataa ccccggaatc tttagttgca tcactgtaga agtgcgacgt
      181 ccaggagcac cccactgcgg cgtgcagccg cagcttcccc cactcgtcca gagcggcaac
      241 acccgcgccg cagcgcggca tcttgcgacg tccaggagca acgccactcc ggcgtgcagc
      301 cggagcttaa gcagcgtgag gatagcaacc gttgacaaaa aaataaggcg gttgttataa
      361 tttggtagtt ttcctactct cccctgccag tacaccctgg caagggatcg gtagatcaac
      421 taccaaggtt gtcgagaagg aaggctgtgc tcgtcacaca gccaccccag gagctcatca
      481 ctccagccga tctcctcgac agggaaccag atcaggcagt aggtacactg ccgataccag
      541 ataccctcga tcttgagcat aggactcacc tccagtctca gggatagcgt ccctgctccc
      601 gttcaccacc acggctgtga tgaacggtcg gcagacacgc tccttatgtc ccggtgagct
      661 gtcgcaccag caaggttaac cagcccgcag gcggcgcgag tttcaccgca ctccacgtcc
      721 ccggcttcgc ccctttctcc accttctcgc ggataatgtc cttgacgtgg aagtcctttt
      781 ccacgtgcag gactaacgct tcaagcatcc ggtccgtggc ctgctgttgg gcctcagccg
      841 gcacttcgta aatccgaatg atggtataga cggccatagg tctctcacct ccagtctcag
      901 gggtaactcc cctgctcttg gttgggacgc gtcccaacca atcggcagag aaactactcg
      961 agatcctgcg gcgcttcgag tggttcaatc cagccccgga gcactttggc gtagtactcc
     1021 tggtagagct ggccaacttt cgccagcgct tgcccgtcat cctcggcccg gatctcgatg
     1081 tcctgcggga caaacacgcg cacgtggtag gttttcatca tgctcacctc ctttctgcca
     1141 gtcaggttgg gtgtcttctg gcaatttgcc gaatggctgg cagaatttgc gggtcaaggc
     1201 aaaacgccgc agcgttttcc tcgcttatgc gaggttgcct tgacgcatag caaatgtgcc
     1261 agctccacca tgagaaggcc agaagacacc cgttgaaacc tcctcgcgct ctccacgggc
     1321 g
//
LOCUS       DASQSL010001462         1236 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_198182, whole genome shotgun sequence.
ACCESSION   DASQSL010001462 DASQSL010000000
VERSION     DASQSL010001462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1236
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198182"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(452..>1236)
                     /locus_tag="VE844_14995"
     CDS             complement(452..>1236)
                     /locus_tag="VE844_14995"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZC02606.1"
                     /translation="SVSRAAYYRSNSPGPTTDAKMALRDRIQRIALEMPAYGYRRITH
                     ELRRQGILVNHKHVLRLMREDNLLCLRKRSWIRTTDSQHHLVIYPNLLPELPVDGLDQ
                     LWVADITYVRLPQEFVYLAVILDAYSRCCIGWALERTLEAELALAALRMALATRAVRP
                     GLVHHSDRGVQYASHAHTAVLKEYGIGISMSRTGNPYDNAQAESFIKTLKYEAVYLLE
                     YQDLAEARRRIGHFIEEIYNEKRLHSALGYRPPAEFERLLSP"
BASE COUNT          262 a          338 c          359 g          277 t
ORIGIN      
        1 acggtgcccg gattgccgaa catgtaatgc ataccatcgg cgaggaattg ctcgatgatc
       61 ataaagctgc cagtcttatt agccatgact gttaactcct aatgcagaac gcactccgat
      121 tagtactcgc gcagtcctca caagatgagc attggggccc gctcccttag gattcgtgag
      181 cggggctgat cctcctctga cactattctg aactcaaagc attttggatg actcgataga
      241 tgcacagtcc ttttcgccgg agcttcttac atactctcag ggaagaaggc tgttgagcgg
      301 ctggcggtcc cacactcgct gtaaccgctt tgacgtgctg gtattcaaat ctggggataa
      361 gctgcaatca caagggtgtt gctaacatcg ctacgtccaa catgagcact ggagtgaacc
      421 cctgatttga gataattagt taagcacata gttatggact aagcagccgc tcaaactcag
      481 ctgggggccg gtacccgagc gctgagtgaa ggcgtttttc gttatagatc tcctcgatga
      541 aatggccgat gcgcctacgc gcttcagcca ggtcctggta ctcaagcagg tatactgcct
      601 cgtacttgag cgtcttgatg aaactctcgg cttgggcgtt gtcataaggg ttgccagtcc
      661 ggctcatgct gatcccaatg ccatactctt tgagcaccgc cgtgtgggcg tgggaggcat
      721 actgcacccc gcgatccgag tgatggacca accccggccg cactgctcgt gttgccaagg
      781 ccatgcggag ggcagcgagc gcgagttcgg cctccagggt gcgctccagt gcccagccga
      841 tgcagcagcg actgtatgca tccaggatca ccgccaggta gacgaactcc tgtggcaagc
      901 gcacataggt gatgtccgct acccaaagtt gatcgagccc gtcaacaggc aattcgggca
      961 gtaaattggg gtagatgacg aggtgatgtt gggagtcggt cgttcgaatc cagctgcgtt
     1021 tgcggaggca cagcaggttg tcctcccgca tgagacgcag cacgtgcttg tggttgacga
     1081 ggatgccctg ccgccgcaac tcatgggtga tccgtcgata gccataggcg ggcatctcca
     1141 gggcaatgcg ctggatccga tcgcgcaacg ccatctttgc atcggtggtc ggcccggggc
     1201 tattgctccg gtagtacgcg gcgcggctca cggata
//
LOCUS       DASQSL010001463         2605 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_105207, whole genome shotgun sequence.
ACCESSION   DASQSL010001463 DASQSL010000000
VERSION     DASQSL010001463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2605
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105207"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            514..906
                     /gene="yajC"
                     /locus_tag="VE844_15000"
     CDS             514..906
                     /gene="yajC"
                     /locus_tag="VE844_15000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002692236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HZC02607.1"
                     /translation="MDLLIANAFAQQAPAAPPGSAVGFVSMLPIIALFVLFYFILLRP
                     QMKRDKEHKKMIQSLAKGDEIVTNGGLLGRVTELGDHFVALEIAKDLEVKIQRQAISM
                     TVPKGTIKTFDKAHKETHTAHAQSKSSA"
     gene            903..>2605
                     /gene="secD"
                     /locus_tag="VE844_15005"
     CDS             903..>2605
                     /gene="secD"
                     /locus_tag="VE844_15005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013221101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HZC02608.1"
                     /translation="MNRYPLWKNLLIIAVMIAGVIYALPNLFGEYPALQITPTRTAQI
                     DQALENRVKTALTEAKLEPLSIERSEQALLVRFTETEAQLKAHDVVDTALGDDYVVAL
                     NLASATPKWLRAIGAQPMYLGLDLRGGVHFLMEVDMDAVVRQVEERLVSDIRSALRDK
                     KIRYKSISRQPGGGLEVSFREAPVRDQGKAIIDDEFPELSLTEQERGEEFLLKLTLTE
                     QAIRDIRKLVLQQNLTTLRNRVNELGVAEPIIQQQGENRIVVQLPGVQDTARAKEILG
                     ATATLEFRMVDLEHDPQGALAGKVPVGAKLYRDREGQPVLLKKQIMLTGDHIIDAASG
                     IDSASGSPAVFVTLDSEGARIFSRATRDNVGRPMGVVFIENKTESQRQGDQIVRVKKT
                     VEEVINVATIREQLSKRFQITGLDSTTEARNLALLLRAGALAAPIYIIEEHTVGPSLG
                     QDNIDMGVKSVSIAFVLVLIFMAVYYRLFGMVANLALLMNLVLTVALLSMIQATLTLP
                     GIAGIVLTVGMAVDANVLINERILEELRNGNTIQASIHAGYERAFATIADSNITTVIA
                     A"
BASE COUNT          565 a          748 c          753 g          539 t
ORIGIN      
        1 ttgacctatg ttgcggtcga taaaaataag gcgggttatt ctgcacgata ctgtatgggg
       61 tgctctgcct tccccccttt agcaaaggag ggcagggggg atttatggcg gtcgtgcgaa
      121 gggcaagcgc tgcaaaatcc ccctctctcc cccttttaca aagggggaag gcagagttgc
      181 agccgccttg gacggccatg gttttagggc gcctttgagg cgctcatcca ataagccccc
      241 ggctttgctg ggggtcattt aacttaaatt acccctcacc cttattccct ctcccccaat
      301 ggggagaggg gaaaaacttt gctagaataa atagttaatt ccctctcccc tggcgggaga
      361 gggttagcgt gagggggaaa aaggcttgcg ggcggctatc gaggctcggc agcttgacca
      421 attcagcaaa cgcttctacg ctgaagtagc gcccgacctt ggaatccggg cgaggattga
      481 aactattttg agattattta caggtgagac cctatggact tattgatagc caatgccttt
      541 gctcagcagg cgcccgctgc cccgccgggg tcagcggttg gatttgtgtc gatgctcccg
      601 attatcgcac tgtttgtgtt gttttacttt atcctcctgc gcccgcagat gaaacgggac
      661 aaggagcata agaagatgat ccagtccctc gctaaaggag atgagatcgt gaccaacggc
      721 ggtctgctgg gccgcgtcac cgagctcggc gaccacttcg tggccttgga aatcgccaag
      781 gacctggagg tcaagatcca acgccaggcg atctccatga ccgtgcccaa aggcaccatc
      841 aagacctttg ataaggctca taaagagact cacaccgctc acgcgcagag caagtcatcg
      901 gcatgaaccg ctatcccctg tggaagaatc ttttgatcat cgcagtgatg atagcgggcg
      961 tgatctacgc cttgcccaat ctattcggag aatatccggc actgcagatc accccaacac
     1021 gcacggccca gattgaccaa gcgcttgaga acagggtcaa aaccgccttg accgaggcca
     1081 agcttgagcc actctccatc gaacgcagcg agcaagcgct gctcgtgcgt tttaccgaga
     1141 ccgaggctca gctcaaggcc cacgatgtgg tcgacacggc gctcggagac gactatgtgg
     1201 tggcgctcaa tctggcctcg gctacgccca aatggctgcg cgccatcggt gcgcaaccca
     1261 tgtatctcgg cttggatctg cgcggcggcg tccattttct gatggaagtc gatatggatg
     1321 cagttgtgcg gcaagtggaa gaacgccttg tctcggatat acgatccgcc ttacgtgaca
     1381 agaagatccg ctacaaaagc atcagccggc aacccggcgg cggcctcgag gtgagcttcc
     1441 gcgaggctcc cgtccgtgat caggggaagg cgatcatcga cgatgaattc cccgagctca
     1501 gcctgaccga acaggagcgg ggtgaggaat ttctgctcaa gctcacgctc actgagcaag
     1561 ccatccgcga tatccgtaag ctggtcctgc agcaaaatct gaccacactg cgcaatcgcg
     1621 tcaacgagct cggtgtggcc gagcccatta tccagcagca aggcgaaaac cgcattgtcg
     1681 tgcagctccc cggtgttcag gataccgccc gtgccaagga gatcctcggg gccacagcga
     1741 cgctcgaatt tcgcatggtc gacctcgagc acgatccgca aggggcgctg gctggaaagg
     1801 taccggtcgg tgccaagctg taccgggatc gcgagggcca gccggtgctt ttgaaaaaac
     1861 agatcatgct gaccggtgac catatcatcg atgccgcctc gggcatcgac tcggcaagcg
     1921 gcagtcctgc cgtctttgtc accttggaca gcgaaggcgc gcgcatcttc agccgggcta
     1981 cccgcgacaa tgtcgggcgc cccatggggg tggtctttat cgagaacaag accgagagcc
     2041 agcgtcaggg cgatcagatc gtcagggtca agaagaccgt ggaagaggtg atcaatgtgg
     2101 cgacgatccg ggagcagttg agcaagcgct ttcagatcac cggcctcgac agcaccaccg
     2161 aggccagaaa tctcgcgctg ttgctgcgtg ccggcgccct ggcggcgccc atctatatca
     2221 tcgaggagca tacggtgggc ccgagccttg gacaggataa tatcgatatg ggcgtcaaat
     2281 cagtcagcat cgccttcgtg ctggtcttga tcttcatggc ggtctactac cggctcttcg
     2341 ggatggtcgc caatctcgcg ctgcttatga acctggtgct taccgtggcg ctcttgtcca
     2401 tgatccaggc cacgctcacc ctgcctggta ttgccggtat cgtgctcacc gtgggtatgg
     2461 cagtcgatgc caacgtgctc atcaatgagc gtatccttga ggagctgcgc aatggcaata
     2521 ccattcaggc gagcatccat gcgggttatg agcgggcctt tgccaccatc gccgactcca
     2581 atattaccac cgtgattgcg gccat
//
LOCUS       DASQSL010001464         1122 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_170566, whole genome shotgun sequence.
ACCESSION   DASQSL010001464 DASQSL010000000
VERSION     DASQSL010001464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170566"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..207
                     /locus_tag="VE844_15010"
     CDS             <1..207
                     /locus_tag="VE844_15010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015460617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="HZC02609.1"
                     /translation="DQEHAAEAFIAGAKPQIEAPGESKKIPIMVRFDPALLRRVNEAA
                     KHRGVSRSAWIQFTLSRALDQGEG"
     gene            complement(220..>1122)
                     /locus_tag="VE844_15015"
     CDS             complement(220..>1122)
                     /locus_tag="VE844_15015"
                     /inference="COORDINATES: protein motif:HMM:NF044726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="HZC02610.1"
                     /translation="EHGETPFIAIEEFRKLIGADGSYENFKKLNARVIKPAIAAINRV
                     SDLKVTVDYQRQGRKVVALKFKIRRLLMLPESPQPTLFPDLDDMPAVVKLLTDAGLAM
                     HDALEIWQKGFDMVEPGKRPPAGDNPEEAFVQYVKEKIHLMHQRRASGKLTNPAGFLL
                     SAIKQNYGNARMEQETSGHVRREQAQDLARLQEQQQQVMRQMEDGLHALADQIIETLP
                     ELLDEAIAALQAENNALMDRYDVRHTPLHNYRKHPAVAIGVGQWLENRFPERFEKTRH
                     AFAKQLASIEARLLELKGHRATAG"
BASE COUNT          212 a          335 c          315 g          260 t
ORIGIN      
        1 gaccaggagc acgctgctga agcgtttatt gcaggcgcca aaccccagat agaagcccca
       61 ggcgagagca agaaaattcc gatcatggtg cgcttcgatc cggctttgct tcgacgcgtc
      121 aatgaagcgg caaaacaccg aggtgtcagc cgcagcgcct ggattcagtt cactttgagt
      181 cgtgcgctcg atcaaggaga gggctagccg caacgcgctt caccctgccg tcgccctgtg
      241 gcctttcagc tccaaaagtc gcgcctcgat gctggccagt tgtttggcga atgcgtggcg
      301 ggtcttctcg aagcgctcgg gaaaccggtt ttccagccac tgccccacgc caatggccac
      361 agcggggtgt ttgcggtaat tgtgcaacgg ggtgtggcgg acatcgtacc ggtccattag
      421 tgcattgttt tccgcctgca atgccgcaat ggcctcgtcc agcaattccg gcagtgtctc
      481 gatgatctgg tcggccagag catgcaggcc atcctccatt tgccgcatta cctgctgctg
      541 ctgctcctgc aaccgtgcca gatcctgcgc ctgctccctg cggacgtggc cgctggtttc
      601 ctgttccatt ctggcattgc cgtagttctg cttgattgca ctaagcagga agcccgccgg
      661 attagtcagc ttgcctgacg cgcggcgctg gtgcatcagg tgaatcttct ccttgacgta
      721 ctgcacgaag gcctcttccg ggttgtcacc tgccgggggg cgcttgcccg gctcgaccat
      781 gtcaaatccc ttctgccaga tctccaaggc atcgtgcatt gctagcccag catcggtgag
      841 cagcttgacc acagcgggca tatcatccag atcggggaac agagtgggct ggggcgattc
      901 cggtaacatc agcaggcggc ggattttgaa cttgagggca acaaccttgc ggccctggcg
      961 ctggtagtcc accgtgactt tcagatcgga aacacggttg attgcagcaa tggcaggttt
     1021 gataactcta gcattcagct ttttaaaatt ctcgtagctg ccatccgccc ctatcagctt
     1081 cctgaattcc tcaatcgcaa tgaaaggcgt ttccccatgt tc
//
LOCUS       DASQSL010001465         1010 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_65263, whole genome shotgun sequence.
ACCESSION   DASQSL010001465 DASQSL010000000
VERSION     DASQSL010001465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65263"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..666)
                     /locus_tag="VE844_15020"
     CDS             complement(<1..666)
                     /locus_tag="VE844_15020"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030638 - polyketide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HZC02611.1"
                     /translation="MSAENNKTLARRLFEAFEDVSRGKADLDTFDKMLAPDFISHDKL
                     LPGQQPGREGFKQAIAELLATFSNPRFLFEDQVAEGEKVVTRLIVRQTHDRREIMGVA
                     PTGREETHKAIFIHRISEGKIAEEWSLATLGLKLRGQHLEQEIRERERVEQELQVARS
                     IQQASLPKQVPDVEGWEITPHYRPSREVGGDFYDFFELPNGRLGVVVGDATGKGVPAA
                     LVMA"
BASE COUNT          189 a          318 c          268 g          235 t
ORIGIN      
        1 ggccatcacc agggccgctg gcacgccttt gcccgtggcg tctcccacta caacacctaa
       61 gcgtccgttg ggtagctcaa agaagtcgta gaagtcacct cccacctcgc gggagggcct
      121 atagtgtggg gtgatctccc aaccctccac atcgggcacc tgcttgggaa gcgaggcttg
      181 ctggatgctt cgggctacct gtagctcctg ttcgacgcgc tcacgctcgc gtatctcttg
      241 ctctagatgc tgccccctca gttttaggcc gagcgttgcc aagctccact cctcggcgat
      301 cttgccctca gaaatgcggt ggatgaagat agctttgtgg gtctcctccc tgccggtagg
      361 cgcgacaccc ataatctccc ttcgatcgtg ggtctggcgc acgattaagc gggtcaccac
      421 cttctctcct tcggctacct gatcctcgaa gaggaacctg gggttggaaa aggtggccag
      481 aagctcggcg atcgcctgct tgaagccttc gcggccgggc tgttgaccgg gaagcagttt
      541 atcgtggctt atgaagtcgg gagccagcat cttgtcaaac gtgtctaagt cggccttgcc
      601 cctactcacg tcttcgaacg cctcgaagag acggcgggct aatgtcttat tgttttctgc
      661 cgacacagaa gaagttcctc cttgccaact ccgcgccttt ctccaatgga cggcactatg
      721 gataatgcca cctgagctct cccggcgcac ctatagaaga actggcgcct agccaggggc
      781 taattacctc tattcaccga gttgccgaca aggcttgttc ccggaaaccc ccaatagccc
      841 ctgtccgcta gggagaggcc ccggtcctag tgggctactc ctcctcgacc ggggcccaga
      901 ttcttaatac acccttaacc ctcgcctaac cttttcttag tagtttgatg gttatgatac
      961 ataggcagcg gggccggagc cattcatcac gggcgcgaca cgtcttttcc
//
LOCUS       DASQSL010001466         1139 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_12989, whole genome shotgun sequence.
ACCESSION   DASQSL010001466 DASQSL010000000
VERSION     DASQSL010001466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12989"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..298
                     /locus_tag="VE844_15025"
     CDS             <1..298
                     /locus_tag="VE844_15025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02612.1"
                     /translation="DFCRTEGIMLTRSRPYKKNDPCFVEQKNGAVVRRWVGYDRYEGL
                     DACTLLAALYAVLRRYINYFQPSMKLVHKVRTGARVTKTYDRAQTPCERLLASP"
     gene            554..760
                     /locus_tag="VE844_15030"
     CDS             554..760
                     /locus_tag="VE844_15030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02613.1"
                     /translation="MRTPPITAQALLHDLQSTYPGHYTQGQLRTLHRRVSAWRKQQAV
                     QRLTPRLPSTITLARALPTLELSV"
BASE COUNT          238 a          369 c          314 g          218 t
ORIGIN      
        1 cgacttctgc cgcacggagg ggatcatgtt gacccgctcc cggccctata aaaagaacga
       61 cccgtgcttt gtcgagcaga aaaacggcgc cgtggtacgc cggtgggtag gctatgaccg
      121 ctacgagggg ttggatgcct gcacgctctt ggccgcgctg tacgcggtgt tacggcggta
      181 catcaactac ttccagccct cgatgaaatt agtgcacaag gtccgcaccg gtgcccgcgt
      241 gaccaagacc tatgatcgcg cccaaactcc ctgcgagcgg ctgctggcct cgccttgacc
      301 cctgcctgct gttggcggag atcaaacgcc ttcaggaggc gctgtggcga ctggccaagc
      361 ccgatctcct gccgacctca catctcgcca cacagcctgg tagcgatccg acccgctgtc
      421 cagtgctcct gcggaagcgc aaacacccaa gcggcggaac tcacggcgtg cccaacggcc
      481 ccggtgtcca catacctggc gcacccggcc cgaccctttc gcggccgtgt gggaggagat
      541 ccaagcgcag ctcgtgcgaa cccccccgat cacagcccaa gcgttattgc acgatctcca
      601 aagcacgtat ccgggacact atacccaagg acagctgcgg actctgcacc ggcgggtgag
      661 tgcctggcgt aagcaacagg cagtgcagcg gcttaccccg cgcctcccca gcaccatcac
      721 gctggcaagg gccttaccaa cacttgagct tagcgtatga gccctacccc attcgcctta
      781 ctttgcatgg cctcaggcta tcctccgcgc ccgtgccgtc aaggccaagc cctacgggga
      841 cgcgctacgc gcgccgcctt gacggcactg gcgctacgga taaagcggta tccatgcagc
      901 gtaaggcaat ctctcgaccg ccacaagggt ggtcgattgt gttatctttt tcccgggcag
      961 cgacaactag aaaaagtaag attctttgat gaggcaatac gacatggatg acaattattt
     1021 ttgtaactac tcagccggct actgccggta gctgaggagt tcccaaaaag acacttttga
     1081 gagcggcgat cacattatga ccttgcttct tcatggtcga gatataactt cggatgcgg
//
LOCUS       DASQSL010001467         1008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_160677, whole genome shotgun sequence.
ACCESSION   DASQSL010001467 DASQSL010000000
VERSION     DASQSL010001467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160677"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1008
                     /gene="ltrA"
                     /locus_tag="VE844_15035"
     CDS             <1..>1008
                     /gene="ltrA"
                     /locus_tag="VE844_15035"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017325234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZC02614.1"
                     /translation="FESLDGKKAIGVDGVTKTMYGQNLEGNLQALHQKLHQMSYRPKP
                     VRRVEIPKDDSSTRPLGISCLEDKIVQEMARRILEAIYEPVFIDTSYGFRPGRSCHDA
                     LRQLNHEVMSEPVNWIADLDLAKFFDTMPHVEILAVLSERIADRKFLRLIARMLKAGI
                     QTPGGVVYDELGSPQGSIVSPVIANAFLDHVLDQWFVHTVRQHCRSYCALTRYADDVL
                     TVFEREDDAHRFMRVLPKRLGKFGLCLNVQKTRLIAFGKRQTWQMFKAGQRPATFDYL
                     GFTHYWGRSRTGKVRLKRKMSKKRLRRALVEINHWLRRERSTRTLPDLWQAVAGKIRG
                     HL"
BASE COUNT          220 a          272 c          302 g          214 t
ORIGIN      
        1 cttcgaatcg ctggatggga agaaggcaat cggagtcgat ggtgtcacca agacgatgta
       61 tgggcagaat ctggagggga atcttcaggc gctgcatcag aagctgcatc agatgtcata
      121 ccggccaaag ccggtgcgac gggtcgagat tcccaaggat gacagcagta cgcgtcccct
      181 gggaatcagt tgtttggaag acaagatcgt ccaggaaatg gctcgccgca tcctggaagc
      241 gatctatgaa ccggtgttca tcgacacctc gtacgggttc cggccaggac ggagctgtca
      301 tgacgccctg cgccagctca accatgaggt gatgagtgaa ccggtcaact ggattgccga
      361 tctcgatctc gccaagtttt tcgatacgat gccacacgtg gagatcctcg ctgtgctttc
      421 ggagcgtatt gccgatcgga agtttctccg tctgatcgcg cgcatgctca aagccggtat
      481 acagaccccg ggtggcgtgg tctatgacga acttggcagc ccgcagggct cgattgtctc
      541 gcccgtgatt gccaatgcgt ttctcgacca tgtcttggat cagtggtttg tccatacagt
      601 aaggcagcat tgccgcagct actgtgcact gacccggtat gccgacgacg tcttgacagt
      661 gttcgagcga gaggatgatg cccaccgctt tatgcgggtg cttcccaagc ggctggggaa
      721 attcggtctt tgtctcaacg tgcagaaaac tcgtctgatc gcctttggca aacgacagac
      781 gtggcagatg ttcaaggcgg gacaacgtcc ggcgacgttt gactaccttg gcttcaccca
      841 ctactggggc cggagtcgaa cgggtaaagt acggctgaaa cggaagatgt cgaaaaagcg
      901 cttgcgccgg gctctggtgg aaatcaacca ctggcttcgc cgagaacgta gcacccgcac
      961 actccccgac ctctggcagg cggtagctgg caagatacgc ggccatct
//
LOCUS       DASQSL010001468         1172 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_65282, whole genome shotgun sequence.
ACCESSION   DASQSL010001468 DASQSL010000000
VERSION     DASQSL010001468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1172
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65282"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1172
                     /locus_tag="VE844_15040"
     rRNA            <1..>1172
                     /locus_tag="VE844_15040"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          276 a          289 c          390 g          217 t
ORIGIN      
        1 accccccgaa aggggagcta ataccggatg ccctcagtag atcgcatggt ccgctgagga
       61 aatggattcc gctccgagag ggcctcgcgg cctatcagct tgttggtgag gtaacggctc
      121 accaaggcgt cgacgggtag ctggtctgag aggacgatca gccacactgg gactgagaca
      181 cggcccagac tcctacggga ggcagcagtg gggaatcttg cgcaatgggc gaaagcctga
      241 cgcagcaacg ccgcgtgcgg gaagaaggct ctcgggttgt aaaccgcttt cagtaggaac
      301 gaaattgacg gtacctgcag aagaaggtgc ggccaactac gtgccagcag ccgcggtgac
      361 acgtaggcac caagcgttgt ccggatttat tgggcgtaaa gagctcgtag gcggttcagt
      421 aagtcgggtg tgaaaactct gggcttaacc cagagccgcc actcgatact gctgtgactt
      481 gagttcggta ggggagtggg gaattcctgg tgtagcggtg aaatgcgcag atatcaggag
      541 gaacaccggt ggcgaaggcg ccactctggg ccgagactga cgctgaggag cgaaagcgtg
      601 ggtagcaaac aggattagat accctggtag tccacgccgt aaacgatgag aactaggtgt
      661 tgtgggtgtt gacccccgca gtgccgaagc caacgcatta agttctccgc ctgggaagta
      721 cggccgcaag gctaaaactc aaaggaattg acgggggccc gcacaagcgg cggagcatgt
      781 tgcttaattc gaggcgacgc gaagaacctt acctgggttt gacatgcagg gaaaagccgt
      841 agagatacgg tgtccttcgg ggccctgcac aggtggtgca tggctgtcgt cagctcgtgt
      901 cgtgagatgt tgggttaagt cccgcaacga gcgcaaccct tatcctatgt tgccagcgga
      961 tcaagccggg gactcgtagg agactgccgg ggtcaactcg gaggaaggtg gggatgacgt
     1021 caagtcatca ggccccttat gtctagggct gcaaacatgc tacaatggcc ggtacaaagg
     1081 gctgcgatac cgcgaggtgg agcgaatccc aaaaagccgg tctcagttcg gattggggtc
     1141 tgcaactcga ccccatgaag ttggagtcgc ta
//
LOCUS       DASQSL010001469         1591 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_189758, whole genome shotgun sequence.
ACCESSION   DASQSL010001469 DASQSL010000000
VERSION     DASQSL010001469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1591
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189758"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            137..787
                     /locus_tag="VE844_15045"
     CDS             137..787
                     /locus_tag="VE844_15045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013233635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit B"
                     /protein_id="HZC02615.1"
                     /translation="MKANTTTLVKAIDTWLPQTQCTRCGYPRCWLYAEAIASDRADIN
                     QCSPGGEVTLGGLANLLGVPTKPLNPQFGAPQPRMRAVIDESHCIGCRKCLDTCPVDA
                     IVGAAKFMHTVIAEDCTGCELCIAPCPVDCITMVPVTPACRQERWPDYSLEESNRWRG
                     RTEARLRRLERENNHSLAGPKETAFMAPRADETKTLEQMREEIRAAVARVKAKRIH"
     gene            800..1189
                     /locus_tag="VE844_15050"
     CDS             800..1189
                     /locus_tag="VE844_15050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018233294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3775 domain-containing protein"
                     /protein_id="HZC02616.1"
                     /translation="MLELSLDKVCFIVLKAREFHAKEEVVIPEEPWSPTDDWALQILA
                     DHRNDPSYQELKYLIDSMDEEEQVNLVALMWLGRGDYSADEWEEALSEARNRLSAHTA
                     EYIIGTPLIADYLEEGLSAFGYSCEEV"
     gene            1202..1390
                     /locus_tag="VE844_15055"
     CDS             1202..1390
                     /locus_tag="VE844_15055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02617.1"
                     /translation="MSAIEDREECRSQTKRDLEELICQLLGGREAERLYYGDGQEEFD
                     RSLKRSGVGDSDCRGDGL"
     gene            1368..>1591
                     /locus_tag="VE844_15060"
     CDS             1368..>1591
                     /locus_tag="VE844_15060"
                     /inference="COORDINATES: protein motif:HMM:NF013593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02618.1"
                     /translation="MVEAMVYEFGMAEEIGFVRIDRRYSLAGETADRCHPAVRRLSRP
                     SVSARNGYSQSIERPSIGSLRHSSSATGFL"
BASE COUNT          358 a          418 c          467 g          348 t
ORIGIN      
        1 gaacttcgcc cgcacggtag tctccccgtt atcatcgtta tgcatttagt gcttagggca
       61 gcctacacct gcttatagtg gtgcgacaat tccaacgagt gagatatact atttcctcgt
      121 aggaggcaag ggtgaattga aagcaaatac aaccacgctt gttaaagcga tcgatacctg
      181 gttaccccag acgcagtgca ctcgctgcgg ctatccgcgt tgttggctgt atgccgaagc
      241 tattgccagc gatcgggctg atatcaatca gtgttcccca ggtggtgagg ttactctagg
      301 ggggcttgcc aatcttcttg gtgtaccaac caaacccctg aacccacaat ttggtgcccc
      361 tcaaccgagg atgcgcgcag tcattgacga atcacactgt atcggttgcc gcaagtgtct
      421 ggatacatgc cccgtggacg ctatcgttgg tgcagccaag ttcatgcaca cggttattgc
      481 cgaggattgc acaggttgtg aactatgtat agctccctgt ccagtggact gcatcacgat
      541 ggtgccggtt acacccgcct gccgccagga gcgctggcca gactattctc ttgaggaatc
      601 taaccgctgg cgaggacgca ccgaagctcg cttgcgtcgg ctcgagcggg aaaacaatca
      661 ctctttagca ggaccaaaag agacagcttt tatggcgcca cgggccgatg aaactaaaac
      721 ccttgaacaa atgcgtgagg agatccgtgc cgccgtagca cgggtcaaag ctaaaagaat
      781 tcactaggag aaggttttta tgctcgagct tagcctggat aaggtgtgtt tcatcgtact
      841 caaggcccgc gagtttcacg ccaaggaaga agtggtcatt ccagaggagc cttggagtcc
      901 gacggatgat tgggcacttc agatcttggc tgatcatcgt aatgatccga gttaccagga
      961 gcttaagtat ctgatcgact ccatggacga ggaagaacag gtaaatctgg tggcgctgat
     1021 gtggttgggc cgcggcgact actcggcgga tgaatgggag gaggcgctct ccgaagcgcg
     1081 caatcgcttg agcgcccaca ccgctgaata tatcatcggt acgccgctca tcgccgatta
     1141 tctcgaagaa ggactctctg cctttggcta ttcttgcgag gaagtctagc aagaggcgca
     1201 cgtgtcggcc atcgaagacc gtgaggagtg ccgttcccag accaaacgcg acctcgagga
     1261 gttgatctgc cagctgctgg gcgggcgcga ggctgagcgg ctctattacg gggacgggca
     1321 agaagaattc gaccggtccc tcaaacgatc tggagtgggc gacagcgatt gtcgaggcga
     1381 tggtctatga gttcggtatg gccgaggaga tcgggttcgt gcggatcgat cgccggtact
     1441 ctcttgccgg tgagaccgcg gaccgctgcc acccagccgt gcgtcgatta tcgaggccca
     1501 gtgtgagcgc acgcaatggc tactcgcaga gcatcgagcg accctcgatc ggatcgttga
     1561 ggcactcgtc gagcgcaacc ggcttcttaa g
//
LOCUS       DASQSL010001470         1187 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_160678, whole genome shotgun sequence.
ACCESSION   DASQSL010001470 DASQSL010000000
VERSION     DASQSL010001470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1187
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160678"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1187
                     /locus_tag="VE844_15065"
     CDS             <1..>1187
                     /locus_tag="VE844_15065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007729120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid adenylation domain-containing
                     protein"
                     /protein_id="HZC02619.1"
                     /translation="AYVPLDPAYPEERLAFMLEDAQVAVLLTQAGLAPTLPQTTAQVV
                     CLDREWERISQAPEGNPRSPLSPENLAYVIYTSGSTGIPKGVAIEHHSPVALLEWSRK
                     IFTPDEFAGVLASTSICFDLSVFELFVPLSWGGRVILAENALQLPTLPMGQEVTLVNT
                     VPSAMAELVRSEGVPISVRVVNLAGEPLQNTLVQQIYQQESIQRVFNLYGPSEDTTYS
                     TFALVSKGSSKAPSIGRPLANTQVYLLDRHLHPVPIGVPGELYIGGAGLARGYLHRPE
                     LTPEKFIPHPFSALPGERLYRTGDVARYLPDGNLEFLGRLDHQVKVRGFRIELGEIEA
                     CLGGHPGVREVVVLAREDVPGQKRLVAYVVPNAEAEVLDHEAVDAGLKTQDLRSYLQQ
                     KLP"
BASE COUNT          224 a          339 c          374 g          250 t
ORIGIN      
        1 ggcctatgta cctttagacc cggcctatcc cgaggagcgg ctggccttca tgcttgagga
       61 tgcccaggtg gcggtgctct tgacccaagc agggttggcc cccaccctgc cccagaccac
      121 cgcccaggtg gtgtgcctcg atcgggagtg ggagaggatc agccaggcgc ctgagggtaa
      181 tccgcgcagc ccgttgagcc ccgagaacct ggcctatgtc atctacacct cggggtccac
      241 tgggatacca aaaggagtag ctattgagca ccacagcccc gtggccttat tggagtggtc
      301 aagaaagatc tttactccag atgagtttgc gggagttcta gcctcaacct ccatctgttt
      361 cgacctctcg gtatttgagt tatttgttcc cctgagttgg ggcggtaggg taattctagc
      421 cgagaatgca ttgcagctac ccaccctacc catgggtcag gaggtcacct tggtgaatac
      481 ggtcccctcg gcaatggctg agttggtgag gtcggagggc gtgccgattt cagtgcgggt
      541 agtcaacctc gcgggtgaac ctcttcagaa caccctggtg caacagatct atcagcagga
      601 gagcatccag cgggtcttca acctctatgg tccgtctgaa gataccacct actccacctt
      661 tgctttggta agcaaaggga gtagtaaagc tccctccatt gggcgtcccc tggccaacac
      721 gcaggtgtat ctcttagacc gccacctcca cccggtgccc ataggggtgc cgggggagct
      781 ctacatcggg ggggcgggac tggcgcgggg ctatctccat cggccggagt tgactcccga
      841 gaagttcatt ccccacccct ttagtgcgct cccgggggag cggctgtatc ggaccgggga
      901 cgtagcccgc taccttccgg atggcaacct cgagtttctg gggcggctgg accatcaggt
      961 caaggtgcgg gggtttcgga ttgagctggg ggagattgag gcctgcttgg gggggcatcc
     1021 gggggtccgg gaggtggtcg tgctggcccg tgaggatgta cccggtcaga agcggctggt
     1081 ggcctatgtc gtgcccaacg cagaagccga agttctcgat cacgaggcag tggacgccgg
     1141 actcaagacc caagatttac gtagttatct gcaacagaaa ctccccg
//
LOCUS       DASQSL010001471         1371 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_160682, whole genome shotgun sequence.
ACCESSION   DASQSL010001471 DASQSL010000000
VERSION     DASQSL010001471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1371
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160682"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            280..1278
                     /locus_tag="VE844_15070"
     CDS             280..1278
                     /locus_tag="VE844_15070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011185157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS30 family transposase"
                     /protein_id="HZC02620.1"
                     /translation="MGGREPLRLDERETISRELSLGHSPRYIGKVLGRHHSTIYDEID
                     RNGKAVNYRAVDAQRRAEENRARPKERKLEESPRLHNAVNDGLRQKWSPEQISTRLRE
                     DHPDDHNMRISHETIYEALYLQARGALRTELTLALRTGRARRVPRSRASASRGKIKDM
                     VHISERPAEATDRAVPGFWEGDLIVGQGNKSQIATLVERTTRFVMLVKIPYDRNAERV
                     AALLAKKMETLPEFLRHSVTWDQGKEMARHADFTIRTGMPVYFCDPHSPWQRGSNENT
                     NGLLRQYFPKGTDLSLYSQEDLDRVAAELNGRPRKTLNCRKPIEVFNDLLADAVSA"
BASE COUNT          296 a          382 c          427 g          266 t
ORIGIN      
        1 catatgtcgg gtcagtcttg aggtaggcga ccatcaactg ctcgaagcgt gaccccttgt
       61 cggcctcaga ggtcgacact cggcgcagct catccaggac gtcgtagacc gttgtcacca
      121 tacgacagat cctgccgtac aactcggcgt gactgcatcc cggctcggat cagtggaggc
      181 cctgtcctcg gcagcgctga acctgggcgg actcaaatga tcaagccgac aatgccgatg
      241 atattataac cggaattgtc gagcgatggg tagggatgga tgggcgggcg ggaaccgtta
      301 cgattggacg agcgggagac catctcccgt gagctgagcc tgggtcacag tccccggtat
      361 attggcaagg ttctcgggcg gcaccattca acgatctatg atgaaatcga ccggaatggt
      421 aaagcggtga attatcgtgc ggtggatgcg cagcgtcggg ccgaggagaa tcgagcccgg
      481 ccgaaggagc gaaaactgga ggaatcaccg cggctgcaca acgcagtgaa cgacgggctg
      541 cgccaaaagt ggtcgcccga gcagatcagc accaggctgc gtgaggatca ccctgatgat
      601 cacaatatgc ggatctccca tgaaacgatc tacgaggcgc tctatctcca ggcccggggt
      661 gcgttacgga ccgagctgac gctggccctg cggaccggcc gagcccgccg agtcccgcgg
      721 tcccgggcga gcgcgagccg gggaaagatc aaagacatgg tccacatcag cgagcgtccg
      781 gccgaggcca ctgaccgcgc ggtgcctggt ttttgggagg gtgatctcat tgtcggacag
      841 ggaaacaaat cgcagatcgc cacgctggtc gagcggacga cccggttcgt catgctggtg
      901 aaaattccct acgaccgcaa cgctgaacgc gtggctgcgt tgctggctaa gaagatggag
      961 acgctgcccg agtttctgcg tcacagcgtg acctgggacc aggggaaaga aatggccagg
     1021 catgcggact tcacgatccg gacgggtatg ccggtgtact tctgtgaccc tcattcaccc
     1081 tggcagcgtg gcagcaacga gaacaccaac ggactgctcc gccagtactt cccgaagggt
     1141 accgatctgt ccttgtattc tcaggaggat cttgataggg tcgctgcaga gttgaatggc
     1201 aggccgcgta agacgttgaa ctgccgcaaa ccaatcgagg tgttcaacga tttgttagcg
     1261 gatgccgtgt cggcatgatc acttgaatcc gcccagactt atccacgcct gtttactttg
     1321 tcactttcac tgtcgtgcag agccttttcc ttggtgtcct tcttggaacg a
//
LOCUS       DASQSL010001472         1174 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_189765, whole genome shotgun sequence.
ACCESSION   DASQSL010001472 DASQSL010000000
VERSION     DASQSL010001472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1174
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189765"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..518
                     /locus_tag="VE844_15075"
     CDS             <1..518
                     /locus_tag="VE844_15075"
                     /inference="COORDINATES: protein motif:HMM:NF025888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phenylacetate--CoA ligase"
                     /protein_id="HZC02621.1"
                     /translation="MHLSDDHLVEVTDPTTGQPVEDGASGELVVSDVWRQAMPIIRYR
                     TGDLTEGLNLEACPCGRSAPRLKRIIGRASDIPRIKGMFVVPRNVQNVLDRYPELGRF
                     QLIVERPARQDELTIKVALKHPVDADALHQRLRADFQDALRLSANVEFVAVHDLPDGL
                     PLIDDRRKMNS"
     gene            832..>1174
                     /locus_tag="VE844_15080"
     CDS             832..>1174
                     /locus_tag="VE844_15080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02622.1"
                     /translation="MSTALLAFALLIGLGVMSFLIALGLASLGLVLSWIFPLTPFQGT
                     LVHLVLLSLALIFVGVTFLVERIKDIFWTASDGEEEILSGQADLPQPNRSRLGFQESL
                     PTHRDYPKVGRN"
BASE COUNT          247 a          343 c          333 g          251 t
ORIGIN      
        1 ggatgcacct cagtgatgat catctggtcg aagtgaccga ccctaccacg gggcaacctg
       61 tcgaggacgg tgccagcgga gagctggtcg tgtcagatgt ctggcgccaa gccatgccga
      121 tcatccgcta tcgtactggc gacctcaccg aggggctgaa cctcgaagcc tgcccctgcg
      181 gccgcagtgc accgcgcctg aagcgcatta tcggccgggc gagcgacatc ccacgcatca
      241 agggcatgtt cgtcgtgccg cgcaacgtac agaatgtcct ggaccgttat cctgagctgg
      301 gccggtttca gctcatcgtg gaacggccgg cacgccagga tgagctgacg atcaaggtcg
      361 cgctcaagca cccagtcgat gcagacgcgc tacaccagcg tctgagggct gacttccagg
      421 acgcgcttcg gctgtcggcg aatgtggaat ttgtcgccgt ccatgacctg cccgatgggc
      481 tgccgctgat cgacgaccgt cgaaagatga actcgtgaat gaccccttgg gtaggcgttc
      541 tggtataaaa acttgaatta gccatgaaaa tgatcgaata tgagcttata aagtttaaaa
      601 atgattgaac ccatacacgt tgcacactct atcacctgaa cagggtaaca gtgaactcca
      661 gcaaaggggt ttcatggccg cgacgctccg tcacacgagc cggaagccct gagacaaggc
      721 ttggacccta atgaccgtgt gcgtcgagtg gttgagcaca ggacaccgcc ggtacgcgct
      781 atccacccgc gccataggcg agtgtagcgc tcgttagaag aaggcctttc tatgtctact
      841 gcactccttg cctttgccct cctcatcggg ctaggggtga tgtcctttct gatcgcgcta
      901 gggcttgcga gtttaggcct tgtcctgtcg tggatcttcc ccctgacccc cttccaggga
      961 acacttgtgc acctcgttct cttgtccttg gccctgattt ttgtcggggt gaccttcctc
     1021 gtagagcgca tcaaagatat cttctggacc gcatcggacg gggaggaaga aattttaagc
     1081 gggcaggcgg atttgccgca gcccaatcgc agcagattag gctttcaaga atccctcccc
     1141 acgcaccgtg attaccccaa agtggggcgt aacg
//
LOCUS       DASQSL010001473         1195 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_170583, whole genome shotgun sequence.
ACCESSION   DASQSL010001473 DASQSL010000000
VERSION     DASQSL010001473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1195
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170583"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(269..>1195)
                     /locus_tag="VE844_15085"
     CDS             complement(269..>1195)
                     /locus_tag="VE844_15085"
                     /inference="COORDINATES: protein motif:HMM:NF013676.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3 family transposase"
                     /protein_id="HZC02623.1"
                     /translation="NWGAGKTSASDGQRFALPRRVLQRTYSPRISDFALEFYTFLADN
                     YAPYYSLPIECTDRDAPFVLDGLLYNETDLELEEHYVDTHGYIEINFAAFTMLSRRFC
                     PLIRGLQHQRIYRVDSDRDYGMLAALVDRADRTINTEVIAEQWHRMGQFYASLERGHT
                     TASVALKRLAGFNAKNRFYRANRDLGRIFKTEFILQYMSQPPLRRRIRRGLLKVDQLH
                     ALARDVYYGRRGRINARELYEQMNSCSCLTLILAGIIYWQAREIDRVLNECDPVNNGI
                     NVSLLEHISPIEWDNVILYGEYVLNRDLIRWT"
BASE COUNT          250 a          323 c          366 g          256 t
ORIGIN      
        1 gattatctga tcgagctcgc gttgcacgag cgcattcgac aaggtgttgc gcttgagcgt
       61 tccaccgagc gccgcttgcg catctggcaa ttgatcgagg gctcgtaaca agccgccttg
      121 cgtcgggtct ttcagttgat agaagaccag caccttaacc aagcgcgatc ctttcaactc
      181 atggcggcgc gattcataag ggtcacggtc gaaaatcggc tgtatatcgg gtactgagca
      241 gattcgtgta attttgcacg ctaagcggtt aggtccagcg gatcaggtcc cgattgagca
      301 cgtattcacc atagagaatc acattgtccc attcgatcgg gctgatgtgc tcgagcagtg
      361 acacgttgat cccgttattc acggggtcgc actcgttcag aactctatcg atttctctgg
      421 cttgccaata gatgatgccg gccaagatca gcgtcaagca gctgcaggag ttcatctgct
      481 catacagttc acgggcgttg atccgccccc gccggccgta gtagacatcg cgggccaagg
      541 cgtgcagctg gtcaactttg agcagcccac gccggatgcg gcgccgcaga gggggttgcg
      601 acatgtactg caggatgaac tcggttttga agatcctccc caggtcccgg ttggcgcggt
      661 agaagcgatt cttggcatta aaaccggcaa gccgtttcaa cgccacggag gcggtagtgt
      721 gaccccgctc cagcgaggca tagaactggc ccatcctgtg ccactgctcg gcgatcacct
      781 cggtgttgat agtgcggtca gcacgatcga ccagggcggc tagcatccca taatcccggt
      841 ccgagtcaac gcggtagatg cgctggtgct ggaggcctcg gataaggggg caaaaccgcc
      901 ggctgagcat agtgaatgcg gcaaagttga tttcgatata gccatgggta tcgacgtagt
      961 gctcttcgag ctccagatcg gtttcgttgt aaagcaatcc gtcgaggaca aacggggcgt
     1021 cgcggtcggt gcactcgatt ggcaggctgt agtacggggc gtagttgtcg gcgagaaaag
     1081 tgtagaactc gagagcaaag tcactgatcc gtgggctgta ggtccgctgc agcacccggc
     1141 ggggcagcgc aaaacgctgc ccatcgctgg cggaggtctt gccagcgccc cagtt
//
LOCUS       DASQSL010001474         1004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_116103, whole genome shotgun sequence.
ACCESSION   DASQSL010001474 DASQSL010000000
VERSION     DASQSL010001474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116103"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..801)
                     /locus_tag="VE844_15090"
     CDS             complement(<1..801)
                     /locus_tag="VE844_15090"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HZC02624.1"
                     /translation="MHGKTMRHREAEHIAQTIRRNYALGVDFYFFTDDNLARAKNWEA
                     FFDMLIRLREEEGIAIEFMIQADIPSYRMKNFIPKAKQAGCTKVFLGVESLDTDTLAA
                     AGKRQNVAANARECVAAYEAAGINTHAGYIIGFPTDTYESVMRSIDKLMHEVKPSTAS
                     FFMLTPLPGSMDHVKLRQRGEWMAEDFNLYDSFHETTRHPHLTNGLWTKAYQEAWNKF
                     YGYENIKAILMRTKTELAYWNTLRNLIWYKSSVFVYREHPMISGFIRFK"
     gene            796..>1004
                     /locus_tag="VE844_15095"
     CDS             796..>1004
                     /locus_tag="VE844_15095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02625.1"
                     /translation="MHVDNAAELTVPNATTTEVERGEIALYEVLEICLIHDGQGLQTH
                     IWLGLAEVIEALPAVGDGILEDLAPV"
BASE COUNT          221 a          269 c          279 g          235 t
ORIGIN      
        1 tttgaagcgg ataaagccgc tgatcatcgg gtgctcacgg tagacgaaga cgctactctt
       61 ataccagatg agattcctga gggtattcca ataggctaat tcggtcttgg tgcgcatcag
      121 gatggccttg atattctcat aaccgtaaaa cttgttccaa gcttcctgat aggccttggt
      181 ccacaagcca ttggtgagat ggggatggcg cgtcgtctcg tggaagctat catacaggtt
      241 gaaatcctcc gccatccatt ccccgcgctg gcgcagtttg acatgatcca tagagccagg
      301 cagcggcgtc agcatgaaga aggatgcggt actgggtttc acctcatgca tcaatttatc
      361 gatactgcgc atcactgatt cgtaggtatc cgtgggaaag ccgataatgt agcccgcatg
      421 ggtattaatg cccgccgcct cataggccgc cacgcactcc cgcgcgttgg cggccacatt
      481 ctgccgcttg ccagccgctg caagcgtgtc cgtatcgagg ctctccaccc ctagaaacac
      541 tttcgtacag ccagcctgct tggctttggg gatgaaattc ttcatgcggt acgaagggat
      601 atccgcctgg atcataaatt caatggcgat gccttcttcc tcccgcaagc ggatgagcat
      661 gtcgaagaac gcttcccagt tcttggcgcg agccagattg tcgtcagtga agaagtagaa
      721 atcgaccccg agggcgtagt tacggcggat cgtctgggcg atgtgctcgg cctcacgatg
      781 gcgcattgtc ttgccatgca cgttgataat gcagcagaac tcacagtccc aaatgcaacc
      841 acgactgagg tcgagcgtgg cgaaattgcc ttgtatgaag tgcttgagat atgcctgatc
      901 cacgacgggc aagggctgca aactcatatc tggcttgggc tcgccgaagt catagaggcg
      961 cttccggcgg tcggcgacgg tatcttggag gatctcgccc cagt
//
LOCUS       DASQSL010001475         1607 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_189807, whole genome shotgun sequence.
ACCESSION   DASQSL010001475 DASQSL010000000
VERSION     DASQSL010001475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189807"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..813)
                     /locus_tag="VE844_15100"
     CDS             complement(<1..813)
                     /locus_tag="VE844_15100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02626.1"
                     /translation="MSTQARELHQSLQKVMRRFGRQCRGQGKVFVNLVHQTEQHLLDL
                     GESIETWTQEAKNLLHQDAQLSEAQRQHLLGDLEAASEAHRQVVKQSQRLTQGKKLGQ
                     FKIVNAYDPTIAPIIKGKSNCPAQFGRKTGILSEPACGFIFANRVPEGNPSDPSYVLP
                     LLDKVQQAIDLVTCSRPFRVHSLGGDLGVNDPELRHALHEPGILSVGIPTTVAPINPQ
                     PRPEEVVDILNASGLNRIRTPYQVQLACASGYSRPVVESHIATLMSRGAGDLR"
     gene            complement(851..1411)
                     /locus_tag="VE844_15105"
     CDS             complement(851..1411)
                     /locus_tag="VE844_15105"
                     /inference="COORDINATES: protein motif:HMM:NF017416.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02627.1"
                     /translation="MGILRHLQHWLNGQGPQLQTTEFVPETHAIRLWADTFPWDAMVD
                     TVSQSFAQRFPKKRVKGGRAPIPPRVLLALELLKHELGESDEGICQRLRTDVAVMYAC
                     GIRKVQTDGSQSHFVLPETLAQFRRRIDQDLMDKLVAIQAAAAMEEGLVSPAHLLVDT
                     FPSEQGSQRVTDATTLYKAQKKPSSH"
BASE COUNT          339 a          425 c          476 g          367 t
ORIGIN      
        1 acgtaagtcg cccgcgccac gcgacatcaa ggttgcgatg tggctttcca ccactggacg
       61 gctgtagcca ctggcacagg ccagctgaac ttgatacggg gtgcgaatac ggtttaagcc
      121 tgatgcgttg aggatatcca cgacctcttc gggtctcggc tgtgggttga ttggtgccac
      181 cgtcgtggga atgcctacgc tgagaatgcc tggctcatgc aaggcgtggc gcaactctgg
      241 gtcattgacc ccgagatcac ctcccaggga atggacccgg aaaggtcgtg agcaggtcac
      301 gaggtcgatg gcctgttgca ccttatcgag caggggcaac acataactgg gatcactcgg
      361 attaccctcg ggcacccgat tggcaaagat aaagccgcaa gcgggctcgg acagaatccc
      421 cgttttacgg ccaaactgag ctggacaatt gcttttgcct ttgatgatag gggcaatggt
      481 aggatcatac gcattaacga ttttgaactg gcccaacttt ttgccttgag tgaggcgctg
      541 cgattgtttg accacttgac gatgagcctc gctggctgcc tccaggtcgc caagcaagtg
      601 ctggcgctga gcctcgctga gctgggcatc ctggtgtagg aggtttttgg cctcctgggt
      661 ccacgtctcg atcgactcac ccaagtccaa taagtgctgt tcggtctgat gcaccaggtt
      721 gacgaagact ttgccttggc cccgacactg acggccgaaa cgtcgcatga ctttttgcag
      781 actttgatgc agctctctcg cttgcgtgct caaggtcgtg gaggttccgg cacacggctt
      841 gctgattcgt tcaatgagat gaaggctttt tttgtgcctt gtaaagggtc gtggcatcgg
      901 tcacacgctg agaaccttgc tcagacggga aggtgtccac taacaaatgg gccgggctga
      961 caagtccctc ctccatggcg gcagcggctt gaatggccac cagtttgtcc atcaggtctt
     1021 gatcgatgcg gcgacggaac tgggctaggg tttcaggcaa gacaaaatgg gattgggagc
     1081 catcggtttg gactttgcgg atgccgcaag cgtacatcac cgccacatcg gtgcgtagcc
     1141 gttgacaaat gccttcgtcg gactcgccta attcgtgttt gagcagttcc aaggccagca
     1201 acacgcgagg cggtatcggt gcacggccgc ccttgacgcg ttttttggga aagcgttgag
     1261 caaaactttg gctcaccgta tcgaccatgg catcccacgg aaaggtatcg gcccacagac
     1321 gaatggcatg ggtttcaggg acgaactcgg ttgtctggag ttgggggccc tgtccgttta
     1381 accagtgttg caggtgacgt aaaataccca tgggaggctc tcctgtttat gatgtggtat
     1441 gagagcctca ggatacgaca agacaccggt cgtgacaacc gctcaacaaa gggtcggagc
     1501 aaatttagtg cccactatat accctcggtg tcgcggaagt agccacgctc atacgtcagc
     1561 gtcaagtctc accggtcgag gtagtcgaag cctgcctcaa gcgcatc
//
LOCUS       DASQSL010001476         1243 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_133553, whole genome shotgun sequence.
ACCESSION   DASQSL010001476 DASQSL010000000
VERSION     DASQSL010001476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1243
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133553"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..292
                     /locus_tag="VE844_15110"
     CDS             <1..292
                     /locus_tag="VE844_15110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02628.1"
                     /translation="YLKLGDGTVMSFIRLRADCFFRHWLLRAEGIDEEGYVRAIATAP
                     YPDRRQVSEVELRIDPVTSDLIEYRYTEQGFVRVFSLANGEYAEHSSRQEGQ"
     gene            complement(326..>1243)
                     /locus_tag="VE844_15115"
     CDS             complement(326..>1243)
                     /locus_tag="VE844_15115"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HZC02629.1"
                     /translation="RSGAFHPRWHVRAAAVSRASPRITRIEGVSMRQTRRTGGPVAIA
                     YDIKGSGPLVVFLHGIGGNRHNWAGQVDYFGAKFCAVAWDARGYGASDDSPQTLQFRD
                     YADDLARLLDHLGAARAHLVGLSMGGMILQDFYSHYPDRVATLSLVDTSVGFGSVSQE
                     VRRDFLARRLEPLERGLTPADIAPGVVEVLVAKDANPEARQRMRASMEALRVDSYKQA
                     LHAIVTTDLLAALPHIDVPTLVIVGEEDVVTPPSDSELLAQRIPGATLVNIPGAGHLT
                     NIEKPQAFNAALETFLHRYAARASEVAAS"
BASE COUNT          251 a          370 c          370 g          252 t
ORIGIN      
        1 ctacttgaag cttggtgatg ggacggtgat gagtttcatc cggctgcggg ccgattgctt
       61 tttccggcat tggctattga gggctgaggg catcgatgag gaagggtatg tccgcgccat
      121 cgctacagcc ccgtacccgg atcggcgaca ggtctctgag gtagaactgc gtattgaccc
      181 cgtcacgagt gatctcatcg agtaccgcta tacagagcag ggatttgtcc gggtgttttc
      241 cttggccaac ggcgagtatg ccgagcactc ctctcggcag gaaggacagt aaagaatggg
      301 ccatcagcct ggcctacccc gtggctcaac tcgcagccac ctctgaggcg cgagcggcgt
      361 aacgatgcag gaacgtttcc agcgcggcat tgaaggcctg gggtttttcg atattcgtca
      421 agtgtccagc tcccgggatg tttacgaggg tggcgccggg gatacgctga gccagcaact
      481 cagagtcaga tggtggggtc acgacatctt cttcgccaac gattaccagc gtaggcacgt
      541 cgatgtgcgg caatgcggca agtaaatcgg tggtgacgat ggcgtgtaag gcttgcttgt
      601 aggagtcaac gcgcagggct tccatggaag cacgcatccg ctggcgtgcc tctgggtttg
      661 catcctttgc caccaaaact tctaccaccc ctggcgcgat gtcagccggt gtcagacctc
      721 tctccagcgg ctccaaccgc cgggccagaa aatcccgccg aacctcttgg ctcacactgc
      781 caaaacccac tgaggtgtcc actagcgaga gggtcgccac gcgatcgggg tagtgactat
      841 aaaaatcctg caggatcata ccccccatcg ataggccgac caaatgcgca cgcgccgcac
      901 cgagatgatc tagtaagcgc gccaggtcat cggcataatc gcggaattgc agcgtctgcg
      961 gcgaatcatc gctggccccg tagccccgtg catcccatgc caccgcgcaa aactttgcgc
     1021 caaagtagtc cacttgccct gcccagttgt ggcggttgcc accgatgccg tggagaaaca
     1081 ccactagcgg accactaccc ttgatgtcat aggcaatcgc gaccgggccg cctgtccgtc
     1141 gtgtctggcg catgctcact ccttcgatgc gggtgattcg gggtgatgcc cgagataccg
     1201 ccgcagcacg tacatgccat ctggggtgaa aggctccgct gcg
//
LOCUS       DASQSL010001477         1067 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_116111, whole genome shotgun sequence.
ACCESSION   DASQSL010001477 DASQSL010000000
VERSION     DASQSL010001477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116111"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(35..>1067)
                     /locus_tag="VE844_15120"
     CDS             complement(35..>1067)
                     /locus_tag="VE844_15120"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZC02630.1"
                     /translation="GIIKLLDHVPADSMTFERFDDYYHQPKNGFPDDKRLNFRELHLV
                     LTPEEATRVAALRAGEADLGRVSLTTREQVEAGGGRLVFSPEARAFQIFLWGCGDPQV
                     PCHDRRVRQALNYAIDKGLIQDQLYGPEVFQVKGWWVVTPSTMGYSPELDPWPYDPDK
                     ARQLLAEAGYPNGEGFGKLIVNTRESPFVPFATEVTQIGADFWRRELGLEVEVRILDA
                     TAMSRDTATTPEIFDGQVMWQDNDGRYDATGIVRLYYSPYGGRPEARIRHNLPEAYAM
                     AEQAIAALGQADEQKILNSTYLRLREEAHIISLGYINIPWGVGPRIQTWEPYPVADYA
                     SALHTITLK"
BASE COUNT          221 a          319 c          287 g          240 t
ORIGIN      
        1 atatgcaagg atacgacttt gagaagccgg tcctttattt tagagtgatg gtgtgcagag
       61 ccgaagcgta atcggccacc gggtagggct cccacgtttg gatgcgcggc cccacacccc
      121 agggaatatt aatataaccc aaggatataa tatgggcttc ttcccgcagc cgcaggtagg
      181 tgctgtttag gattttctgc tcgtccgctt gaccaagtgc ggctatggct tgttccgcca
      241 tggcataggc ctcggggaga ttgtggcgta tcctcgcctc tggtcgtcct ccatatggcg
      301 agtaataaag tcgcacaatg cccgtcgcgt catatctgcc gtcattatcc tgccacatga
      361 cctggccgtc gaaaatctct ggagtggtcg cggtatccct tgacatggcc gtagcatcaa
      421 gtatcctcac ctccacttcc agtcccaact cccgccgcca gaaatcggcg cctatttggg
      481 ttacctcagt cgcgaaggga acgaaagggg attctctggt gttcacaatc aatttgccga
      541 agccctcgcc attgggatag ccagcttctg ccagcagttg ccgagccttg tcgggatcat
      601 agggccaagg atccagctcc gggctgtacc ccatggtgct gggggtgaca acccaccacc
      661 cttttacctg aaacacttca gggccataga gttgatcctg tatcaacccc ttgtcaatgg
      721 cgtagttgag ggcctgacgc acccgccggt catggcaggg gacctgagga tccccgcacc
      781 cccatagaaa gatttgaaac gctcgcgctt ctggactaaa caccaagcgc ccacccccgg
      841 cttcgacctg ctcgcgcgtc gtcaggctaa cgcgacccaa atctgcctca ccagcccgca
      901 gagccgctac ccgggtagct tcctcggggg tcagcaccag gtgcagctcc ctgaaattca
      961 gccttttatc gtcggggaaa ccgtttttgg gctgatggta gtagtcatcg aagcgctcga
     1021 aggtcattga gtccgccggg acgtgatcca gcagcttgat gatgcca
//
LOCUS       DASQSL010001478         2110 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_105244, whole genome shotgun sequence.
ACCESSION   DASQSL010001478 DASQSL010000000
VERSION     DASQSL010001478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2110
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105244"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..363
                     /locus_tag="VE844_15125"
     CDS             <1..363
                     /locus_tag="VE844_15125"
                     /inference="COORDINATES: protein motif:HMM:NF028456.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HZC02631.1"
                     /translation="ELPPPELYGPAEADVTLVGWGSTKGLIREAISLLAEEGITANNL
                     QIKYLVPFHAAEVEAILQGAKCKIAVEHNFTGQLARHIRAETGIKMDEKILKYDGEPL
                     EPHHIVERVKEVLHAYSR"
     gene            347..1219
                     /locus_tag="VE844_15130"
     CDS             347..1219
                     /locus_tag="VE844_15130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020383751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HZC02632.1"
                     /translation="MPTVVELPVTTYKGPVDPDWCPGCGDFGVLRGLQRAAGKLGIQP
                     KDLMVVSGIGCSSNLPGYIHAYGFHGLHGRAVALATGMKLGNPDLHVVVTGGDGDGYG
                     IGIGHFIHAMRRNMDVTYIVMNNMTYGLTTGQASPTTPKTTATKSTPEGNIESPINPL
                     ALALVSGATFIARGFSGEINHLTDVIAQAIEHKGFALVDVFSPCVTYMNMYQFFKPRV
                     YTLDGTDHDTTDWNQAMIKSYEWGEKIPLGVFYRTEAPTYDQLDSSYKHGSPVRQTLG
                     LTADQGQTLVKTFM"
     gene            1311..1769
                     /locus_tag="VE844_15135"
     CDS             1311..1769
                     /locus_tag="VE844_15135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012873078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HZC02633.1"
                     /translation="MRVEAKLHELGLELPPTPRPAANYVGAVQTGNLLFVSGHGPTKG
                     GQFTYIGKVGKDLSIEEGYEAARLVALNCLASARAVIGDLDRITRVVKILGMVNCSED
                     FGEQPKVINGASDLLVQLFGDYGRHARSAVGMQALPFGIAVEIEMIFEVA"
     gene            complement(1865..>2110)
                     /locus_tag="VE844_15140"
     CDS             complement(1865..>2110)
                     /locus_tag="VE844_15140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02634.1"
                     /translation="RIGPFEARKEAHEVANALVDEGYYIFLDEVAASSILNQRLQMAR
                     GHDDRRSREFEPVDSSADGLDGVGGRAGIAYHVHSSD"
BASE COUNT          460 a          609 c          632 g          409 t
ORIGIN      
        1 gaacttccgc ctccggagct ctacggacct gccgaggcgg acgtgacact tgtcggttgg
       61 ggatcgacca aaggcttgat tcgcgaggcc atctccctgc tagccgagga ggggatcacg
      121 gcgaataact tgcagatcaa atatctggtg ccgtttcacg ctgctgaggt ggaagccatt
      181 ttacaggggg ccaagtgtaa gatcgccgtc gagcacaact ttaccggcca gctcgcccgc
      241 catatccggg ctgagaccgg catcaagatg gatgagaaga tcctcaaata cgacggggaa
      301 ccccttgagc cccatcacat cgtcgagcgc gtaaaggagg tactccatgc ctacagtcgt
      361 tgaactgccc gttacaacct acaaaggccc ggtagatccc gactggtgcc caggctgcgg
      421 tgacttcggg gtactgcgtg ggctgcaacg ggccgcaggg aaactcggga ttcagcccaa
      481 ggacctgatg gtggtctccg gcatcggctg ctcgtcaaac ctgccaggct acatccatgc
      541 ctatggcttc cacggcttgc atgggcgcgc ggtggcacta gccacgggga tgaagttggg
      601 gaatcccgat ctacacgtgg tggtcaccgg cggcgatggc gacggctatg gcatcggcat
      661 cggccatttc atccacgcca tgcgtcggaa tatggacgtg acctacatcg tgatgaataa
      721 catgacgtat ggcttgacga cgggccaggc ttcgccgacc acgccgaaga ccaccgcgac
      781 gaaatcgacg cctgagggca atatcgaatc gcccatcaac ccgctggcct tagccttggt
      841 ctcgggggcg accttcatcg cgcgcggttt ttcgggggag atcaatcacc tcaccgacgt
      901 catcgctcag gcgatcgagc acaagggctt cgccctcgtg gatgtgttca gcccctgcgt
      961 gacctacatg aacatgtatc agttctttaa gccgcgggtg tataccttgg atggaacaga
     1021 ccacgacaca actgactgga atcaagcgat gattaagtcc tatgagtggg gggagaagat
     1081 cccgcttggc gtgttctatc gcaccgaggc tccgacctac gaccagttgg attccagcta
     1141 caagcacggc tctccagtcc gacaaacact agggttgaca gccgatcagg ggcagactct
     1201 ggtaaagacg ttcatgtagg gaaccaggca gcggggcatc agggcaccaa ggaagacggt
     1261 tgggagaccg atgcctcgac gccttgaccc ctctcatgag ggacatatgc atgcgggttg
     1321 aagccaaatt gcacgaatta gggctggaac tcccaccgac tcccagaccc gcggccaatt
     1381 atgtgggggc agtgcagacc ggtaacctcc tcttcgtctc cgggcatggg ccgacgaaag
     1441 gtggtcagtt cacctacatt ggcaaggtcg gcaaagacct gagcattgag gagggctatg
     1501 aggcggcgcg cttagtggcg ctcaattgtc tggcctcggc gagggctgtg atcggagatc
     1561 tggaccgcat cacgcgtgtg gtgaaaatcc tcggcatggt caactgcagt gaggatttcg
     1621 gggaacagcc gaaggtgatc aatggtgcct ctgatctcct agtgcaactg ttcggcgact
     1681 acggccgaca cgcgcgttcg gccgtaggta tgcaagctct accgtttggc atcgccgtcg
     1741 aaatcgaaat gatcttcgaa gtggcatagg gcgagcgccc ctccgagaga gggcggcgct
     1801 ggcaatggca ggggccttta ttgccagcgc cgcaagtatc tctgacgcgg aagacgatca
     1861 gcacctaatc agacgagtgc acgtggtaag cgattcccgc ccgcccgccg accccatcca
     1921 aaccgtctgc tgacgaatca acaggttcga actctcgtga ccgtctgtca tcatggcctc
     1981 tggccatctg caggcgctga ttcaagattg aactggcggc cacctcatcc agaaaaatgt
     2041 aatacccctc atcgaccagc gcgttggcga cctcatgggc ttccttgcgc gcctcgaaag
     2101 ggccgatgcg
//
LOCUS       DASQSL010001479         2345 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_198247, whole genome shotgun sequence.
ACCESSION   DASQSL010001479 DASQSL010000000
VERSION     DASQSL010001479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2345
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198247"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(548..898)
                     /locus_tag="VE844_15145"
     CDS             complement(548..898)
                     /locus_tag="VE844_15145"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014960097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HZC02635.1"
                     /translation="MFVVTNRIPVAPGNEAEFEDRFRNRAHLIDRSPGFIKNQVLRPV
                     QRRFNHQTGQWEEKTEQGYYLVQTYWESEQVFWDWTNSESFRIAHSNRPPAEMFAGPN
                     VLEIHEVILSTESQ"
     gene            complement(997..2112)
                     /locus_tag="VE844_15150"
     CDS             complement(997..2112)
                     /locus_tag="VE844_15150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017840399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
                     /protein_id="HZC02636.1"
                     /translation="MTAIFMEHFSDLKDPRDDKNKKHQLIDILFLVIAAVLSGAEGWE
                     AIETFGKEKLEWLRKYFPFANGVPSHDCIRMVMISLSPKALQACFARWVQAVVEVANG
                     EVVAIDGKTIRRSFDRAEGLGAIHMVSAWAKRNGVSLGQVKTEEKSNEITAIPALLGL
                     LELRGCIVTLDAMGCQREIAEKIREQGADYVLAVKANQKELQEALEDYFETAERAGYR
                     AVPLESLEEVDSGHGRVEVRRYELVPDLSILPKPEQWRDLQGIARVECERHVGEQVSS
                     EVRYYITSFGQKVERLAEAVRGHWGIENSLHWVLDVTFREDDSRLRTGYGAENFAVIR
                     HIALNLLKREPSKGSLKRKRYKAALSNEFRSNVLFPQ"
BASE COUNT          492 a          702 c          608 g          543 t
ORIGIN      
        1 gaatcttcca ggactgctcg gaacgtgacg gtcatttgcg cgcctgcgac cgtggctgac
       61 tggccgagcc ggagcgcgaa aacctgaccg agcgacaccc caggagtggc acgcactgcc
      121 gggaatgtcg cgatgcacaa aacgagagcg acacagaggg ctacaaagac ccgcctgacc
      181 tgaacggacc tacgcggaac tttttgcttg ctcaaacaca ttttataccg caaagcgcag
      241 accgctttct ctcccatctt tctgagcatg gggttcgacc agcaacaaaa ccgtcattga
      301 cgctaagccg tccagttttg tagacagagt cacgtgatcg tccaccttaa cagaaggcgg
      361 caacactcta ccggtcgtag attaagacgc aagcgggttg tcagccgctt tccccgaagg
      421 ctgcgttgcc aaaatgcctc aggagtctcc ataggcttta gcctacctct attagcgtca
      481 ttgaggatcc cgttactcct caaaccctct ctatgccctt cagtgatcca tgcacatggg
      541 gttgccccta ctggctttcc gtgctcagga tcacctcgtg gatctcgagt acattggggc
      601 cggcgaacat ctccgccggt ggccggttgc tatgggcaat gcgaaacgac tcgctattgg
      661 tccagtccca gaagacctgc tcgctttccc aatacgtttg caccaggtaa tagccctgct
      721 ccgtcttctc ttcccactgg cccgtctggt ggttgaaacg gcgctgcaca gggcgcagta
      781 cctggttctt aatgaaccct ggcgagcggt cgatgagatg cgcgcggttg cggaagcgat
      841 cttcaaattc ggcttcgttt cctggggcaa cgggaatgcg gttggtcacg acgaacacga
      901 tgggttgtcc tgttctatag tatctttatt attatacacg ctacccggta gacagaggag
      961 aatctttata acctccacag ggcaagcgcg caatctttat tgtggaaaca acacgttaga
     1021 tcggaactca ttgcttaacg cagccttata acgtttccgc ttgagacttc ctttggaagg
     1081 ctcgcgtttg aggaggttca aggcgatgtg gcggatgact gcgaagttct ccgcgccata
     1141 gccagtacga agtctactgt cgtcttcccg gaaggtcacg tctaataccc agtgcaacga
     1201 attctcaatg ccccaatggc cccgcaccgc ctcggccagg cgctcgacct tttgcccgaa
     1261 ggaggtgatg tagtagcgca cctcgctaga gacttgctca cccacgtggc gttcgcattc
     1321 cacccgcgcg atcccttgga ggtccctcca ctgctccggc ttgggcagga tagagaggtc
     1381 gggcaccaat tcatagcgtc gtacctcgac ccggccatga ccgctgtcca cctcttccaa
     1441 gctctccagt gggacagcac gatagcccgc cctttctgcc gtctcgaagt aatcctcgag
     1501 ggcctcctgc aactccttct ggttcgcctt caccgccaac acatagtccg ccccttgctc
     1561 ccggatcttc tcggcaatct cccgctggca ccccatcgca tccagggtca caatacagcc
     1621 gcgtagctcc aaaagcccta acagcgccgg gattgccgta atttcattgg atttctcctc
     1681 cgtcttcacc tgcccgaggc tcaccccatt gcgcttggcc caggcactga ccatgtggat
     1741 tgcccccaga ccctccgcac ggtcgaagga gcggcggatc gtcttgccgt caatggccac
     1801 cacctcgccg ttagctactt ccactaccgc ctggacccac cgagcaaaac aggcttggag
     1861 cgccttgggt gagaggctga tcatgaccat ccgaatgcag tcatgggagg gcaccccgtt
     1921 ggcaaacggg aagtacttcc gcagccactc aagcttctct ttcccaaagg tctcaatcgc
     1981 ctcccagccc tccgctccac tgaggacagc agcaatcacc aaaaacagga tatctatgag
     2041 ttggtgtttc ttgttcttgt cgtcgcgcgg gtctttcaga tcggaaaaat gttccataaa
     2101 aatggcggtc attggcaact cctcttcgtg aagcgtcaat gatcacctat tattttgttt
     2161 tgtaaaacta tattacgcgc ttgccctggg cgtctcgcgc gagtgcggga caaagggggg
     2221 gtagtcggct cagggagctg aaccggatgg gagggggtat cggttgggga tcagggtgcg
     2281 ccgcttagcg gcttaatttc agtgtttaag catgcgtagt gtaaaatttg tattcgatgt
     2341 tttta
//
LOCUS       DASQSL010001480         1441 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_50369, whole genome shotgun sequence.
ACCESSION   DASQSL010001480 DASQSL010000000
VERSION     DASQSL010001480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1441
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50369"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..667
                     /locus_tag="VE844_15155"
     CDS             <1..667
                     /locus_tag="VE844_15155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020722091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HZC02637.1"
                     /translation="KNPRKWPNLFDFRATFIEPPRISADMPPVRITLPDGAIATSQQS
                     DLNQILSNALNRKVTFTGPGRGQVGPANAEEYWPDIEGLDYRDTVTDFDLPEGTFFDC
                     ATVHLLTMATLDRLRELYPTGRFEVRRFRPNIVLEPAAGEKTFIENSWIGHTLAIGDE
                     VRLSVTGPCPRCVMITLPQGDLPRDPDILRTVAQHNQANVGVYAAVVRGGMIHRGDPV
                     RFE"
     gene            795..1196
                     /locus_tag="VE844_15160"
     CDS             795..1196
                     /locus_tag="VE844_15160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015161038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group 1 truncated hemoglobin"
                     /protein_id="HZC02638.1"
                     /translation="MSTQQPQATLYERLGGIYNIATVVEDLIDRIMVDPRLNANPRVD
                     EAHHKVPPAGFKYLVTEMVGEATGGPQRYTGRSMVDSHRDLKITPQEWEAFLDDFHQT
                     LDNFHVPAAEQAELRAIVQSTYGDIVVGSDA"
BASE COUNT          326 a          432 c          384 g          299 t
ORIGIN      
        1 caagaacccc agaaaatggc cgaacctctt cgacttccgg gctactttca tcgagcctcc
       61 gcgcatcagc gccgacatgc cgccggtccg aattaccctg ccggacggtg ctatagccac
      121 cagtcagcag agtgacctta accaaatcct ctctaatgcg ctcaaccgta aggtaacctt
      181 tactgggcct gggcgtggcc aagtggggcc ggccaatgcc gaagagtact ggccagatat
      241 cgaaggcctc gactatcgag acaccgtcac agacttcgac ctaccagagg gtacattctt
      301 cgactgtgcc actgtccatc tcctgacgat ggccacgctg gaccggcttc gtgaactcta
      361 tccaacaggg cgctttgagg tgcggcggtt tcggcccaac atcgtgctag agcctgctgc
      421 tggtgagaag actttcattg aaaattcctg gatcggccac acgctcgcta tcggggacga
      481 ggtgcgccta agcgtcacag ggccctgtcc ccgctgtgtg atgatcaccc tgcctcaggg
      541 ggatctcccc agggatccgg acatcttgcg cacggtagcc cagcacaatc aggccaacgt
      601 tggtgtttat gccgccgtgg tgagaggtgg tatgatccat cgcggtgatc cggtcaggtt
      661 tgagtaacgc cacagctacg aaacgccgcc taaccagtgc aggcaccgga cacgcttcgc
      721 tcgcgctggg tgctcactct ccgcaacagg tggccatcct cgttcacagg actgacacga
      781 gaaaggagaa tcggatgtct acccaacaac cacaggccac tctctatgaa cggctcggcg
      841 gtatctacaa cattgcaacg gtcgtcgaag atctcatcga tcgcatcatg gttgatcctc
      901 gcctcaatgc caacccccgc gttgatgaag ctcaccataa agttccgcca gccggcttca
      961 agtacctggt aaccgaaatg gtgggtgagg ccacgggggg cccgcaacgg tatactgggc
     1021 gctccatggt cgattcccat cgtgacctca aaatcacgcc gcaagagtgg gaagccttcc
     1081 tcgatgactt ccatcagacc ctcgacaatt tccacgttcc cgccgcggag caggccgagc
     1141 tccgagcgat cgttcagagc acgtatggtg acatcgttgt cggcagtgac gcatgatcga
     1201 tgtgcttgaa atggcagcgc aatgacttct cgccgttctc ttggtcgcag atgtcgcgct
     1261 gttcggggac taacctctca ttcaacccgg acgcctcggc gccggttaac ttcgtccgtc
     1321 aggtggcctg taaaagagca ccggtaaact tgtaaccaat gatggatgtt aagctatggg
     1381 tataatccta caaaggttca aaaccggcaa tgaaaaagta acgagtgttt taccaaatca
     1441 a
//
LOCUS       DASQSL010001481         1538 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_65358, whole genome shotgun sequence.
ACCESSION   DASQSL010001481 DASQSL010000000
VERSION     DASQSL010001481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65358"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1230)
                     /locus_tag="VE844_15165"
     CDS             complement(<1..1230)
                     /locus_tag="VE844_15165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HZC02639.1"
                     /translation="MLTSLQLGDNARWKQRFRAPVIVWTQVALANPTRGLTINNTSGK
                     FQLYAWDVPSGALRQLTERPAGILFGTLSGDGRYVYYLDDQQGNEIGHFVQIPFEGGE
                     PQDLTPNLPPYSSFAFASSGSAHHFGFMAADTEGFHIYSLETRANGERGMPHQLFHSR
                     KFALGPTYSYGGEIAVVATTDRATVQHYNLLAFDTASGAQIAELWDGPGTSIEVTGFS
                     PRPGDLRVAGTTNRSGVKRPLIWNPRTGERTDLDLPDLAGEIFPLDLSLDSERLLLCQ
                     FHQAVQQLYLYDLTTQTLIKLNHPGGTFGFFAGLGTYFGPGGEIFAQWQDAAHPSQLI
                     ALDARTGAKTRTVLAAGDVPPGRPWKSITFPSSDGQMIQGWLGMPEGKGPFPTILHTH
                     GGPEAVMTEMFGPGSQAW"
BASE COUNT          321 a          411 c          466 g          340 t
ORIGIN      
        1 ccatgcctga ctgcccggcc caaacatttc ggtcatcacg gcctccggcc caccgtgcgt
       61 atgcaagata gtggggaagg ggcctttgcc ctcaggcatg cctagccagc cctgaatcat
      121 ctgcccatcc gacgacggaa aggtgatgga cttccatgga cggcccggcg gcacatcgcc
      181 tgcggctagc actgtccgcg ttttcgctcc cgttcgcgcg tcgagcgcga tgagttgcga
      241 gggatgagca gcgtcttgcc attgggcgaa gatttcgcct cctggcccaa aataggtgcc
      301 caggcccgcg aaaaatccaa atgtgccgcc ggggtggttc agttttatca gagtctgggt
      361 ggtcaggtcg tagagataga gttgctgaac ggcctgatga aattggcaga gcaacaggcg
      421 ttcggaatcg agcgacaaat ccagcgggaa gatttccccg gcgaggtcag gtaaatcgag
      481 gtcggtgcgt tcgcctgtgc gtgggttcca aatgagaggc cgtttgaccc cactgcggtt
      541 ggtcgtcccg gccactctca agtcgccggg ccggggcgaa aaccctgtga cttctatgct
      601 cgtccctggg ccgtcccaga gttcggcgat ttgagctccg ctggctgtat cgaaggctag
      661 caggttgtag tgttgcaccg tggcacggtc ggtggtggca accacggcga tttcgccacc
      721 gtaggagtac gttggcccta aagcaaactt acggctgtgg aataactggt ggggcatgcc
      781 gcgttcgcca tttgccctcg tctccaaact gtaaatatgg aagccctcgg tgtcagcggc
      841 catgaagcca aaatgatgtg ccgacccgct ggaggcaaag gcaaaggacg aatagggtgg
      901 taggttgggt gtgaggtctt gcggttcccc accctcaaag ggaatttgga caaaatgacc
      961 aatctcgttg ccttgctggt catccaaata ataaacatag cggccatcgc cggacagcgt
     1021 gccgaacaag attccggcag gccgttcagt cagttgtcgc aatgccccgg agggcacatc
     1081 ccaagcataa agttgaaatt tgccggaagt gttgttgatg gttaacccac gtgtaggatt
     1141 ggcgagtgcc acttgtgtcc atacgataac cggcgcgcgg aagcgctgtt tccagcgagc
     1201 attgtcacca agttgtaagc tcgtaagcat agacttctcc ttgttggaga gaatagtagc
     1261 cgcccaacga cttgaggtga gcgacgcgcc gctttttggt gcgtccgtct cgaccgaagg
     1321 gttaggttcc gtttgtgtga cgaacagtgt cagtagttcc aagtttactc cattagcgac
     1381 tgctgctggt ccggttatga tcaaggcgct tgtgtcaggg cgatctgtcg acaataccaa
     1441 aggtttgcac aaaccttcca tccggtgtgt agaggagcca gtccggcagc ttggcccccg
     1501 gatcgtttga gagaacgcta tcacatccga tggtcgtc
//
LOCUS       DASQSL010001482         1601 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_198278, whole genome shotgun sequence.
ACCESSION   DASQSL010001482 DASQSL010000000
VERSION     DASQSL010001482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1601
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198278"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(113..1087)
                     /locus_tag="VE844_15170"
     CDS             complement(113..1087)
                     /locus_tag="VE844_15170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02640.1"
                     /translation="MPKKSRGQKRQAKTKQRQQRRARRASPPSRSFLGGMPFGGALNV
                     PQGFRPMSMTQALLEYAAPIMAYVEDGTVQDPNEALQLSLLLWNSTLPNAPVAVRQSR
                     REIVAHIETTLQLGRQEAEAFFDHMIARKASLFPDEIQPEGSMTMFMRKEVEYLITPF
                     EESQLHLSDALVPPDRDDETFLDALRQLEARIDAGDDYGDWEADFFEMQERCCQRYYH
                     WLLAKGVSETWSQQFSFCLEPYLTFIYQYDAGHVQDVVPDALEEFFMDWLMRKVMVKP
                     PEYTQWPPALRLFYRFLAEKGYLDDPGPVIAGLQAIEPAFIAMVRQRS"
BASE COUNT          356 a          440 c          452 g          353 t
ORIGIN      
        1 taatctgccc tctatttttc ctcaccccgt ttgtgtcact ttcaggatta tctggcacac
       61 tttcagaatg atttgtcatg cggtgcggat ccaagggcac cacctggacc gctcatgagc
      121 gctgtctcac catcgcaatg aatgcgggtt cgatggcctg taagcctgcg ataaccggtc
      181 ctggatcgtc gagatagccc ttttcggcta aaaagcgata gaagaggcgg agggcaggcg
      241 gccactgcgt gtattcgggc ggtttgacca tcaccttccg catcagccaa tccatgaaaa
      301 actcttcaag ggcatcaggc acgacgtcct gcacatggcc ggcatcgtat tggtagatga
      361 acgtgaggta gggttcaagg cagaaggaga actgctggct ccacgtctcc gagaccccct
      421 tcgcgaggag ccagtggtaa tagcgttgac agcagcgttc ctgcatctcg aagaagtccg
      481 cttcccagtc accgtagtca tcgcctgcgt caatgcgcgc ctccagctgg cgcagggcat
      541 cgagaaacgt ttcatcgtca cgatctggtg gaacgagcgc atcggagagg tgcagttggc
      601 tctcctcaaa cggcgtgatg agatactcga cctccttgcg catgaacatc gtcatggatc
      661 cttcgggttg aatctcgtcg ggaaacaacg acgccttgcg tgcgatcatg tgatcaaaga
      721 aggcctccgc ttcctgccgg cccagctgta aggttgtctc aatgtgggcg acgatctccc
      781 gccgggattg ccgcacggcc accggggcgt tgggcagcgt gctgttccac agcagcaagc
      841 taagctgtaa ggcctcattg gggtcctgga ccgttccgtc ttcgacgtag gccatgatcg
      901 gcgccgcata ctccagcagt gcctgggtca tggacatggg acgaaaccct tgggggacat
      961 tcaacgcgcc gccaaacggc atgccgccca gaaatgaccg agacggcggt gatgctcgtc
     1021 gtgcgcgacg ttgttggcgc tgcttcgtct tggcctgccg tttttgccca cgtgactttt
     1081 tcggcatagg gatccctttc gtgtgcgaag gtgcgatgtg ggctaggagg aggagtgcgc
     1141 ctgacggaca tcggcataga gggtcggctt cgagatgccc attatccgat gtccatagcg
     1201 gccctgacac aaagggaaat aactcatggg gaaccaagtg tatcttaacg ttgttttcct
     1261 actgcgttta ctaccccaat tcgggctcac acgcaaccga aaatggaaag agagacaaca
     1321 ggaaaagaaa ccttcgtttt cttgccccag gtgatcgacg aagcggcacg ggagagcttg
     1381 gtgactagtg ccatctaaaa gcgcaatgta ccgcgtgaca cataattctg aaactgtgac
     1441 agataatttt gaaagttaca cccaccatcg cctccaggac gaacgatctt tcgcaccccc
     1501 taagtacagc gcgtcatgaa aaactatgca aattggcttg acgtgaaggg cacgcgccgg
     1561 tatgtctttc ctagcgttca ccgcaacgct gggaggagat t
//
LOCUS       DASQSL010001483         1296 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_189875, whole genome shotgun sequence.
ACCESSION   DASQSL010001483 DASQSL010000000
VERSION     DASQSL010001483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1296
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189875"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..473)
                     /locus_tag="VE844_15175"
     CDS             complement(<1..473)
                     /locus_tag="VE844_15175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012121762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin"
                     /protein_id="HZC02641.1"
                     /translation="MLSKTVQDAMNEQIKNEFYSAYQYLAMAAYCESANLPGFAQWMR
                     TQSQEETEHAMKFYDFILDRNGRVVLQAIEGPVIEFGSPLEVFEQALEQEQKVTAMIN
                     DLYGLAVKESDYASQAFLQWFVTEQVEEEKNVRDVLETLNMVGDESESLFLLDREL"
     gene            complement(973..>1296)
                     /locus_tag="VE844_15180"
     CDS             complement(973..>1296)
                     /locus_tag="VE844_15180"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HZC02642.1"
                     /translation="AFGRRDGARSVIVRSMRRVVTTIRIDKPVSSLVQNGPFRYSRNP
                     GYVALAMIYPGIAVLRNALWAILLLPLVVYVIQREVIEREERYLERTFGEEYVNYKAQ
                     VRRWI"
BASE COUNT          252 a          405 c          342 g          297 t
ORIGIN      
        1 agttccctgt cgagtaggaa gagcgactca ctctcgtccc cgaccatgtt tagcgtttcc
       61 agcacgtctc tgacgttctt ctcctcctcg acctgctccg tcacgaacca ctgcaggaaa
      121 gcctggctcg cgtagtcgct ctccttgacc gccagcccgt agaggtcgtt tatcatcgcc
      181 gtgacttttt gctcctgctc cagcgcctgc tcgaaaacct ccagaggcga accaaactcg
      241 atgactggcc cttctatcgc ctgcagaaca acacggccat tacggtccag gatgaagtcg
      301 tagaacttca tcgcgtgttc cgtctcctct tgcgactggg tccgcatcca ctgcgcgaag
      361 cccggaaggt tcgccgactc gcagtacgcc gccatcgcga ggtactggta ggcggaatag
      421 aattcgttct tgatctgctc gttcattgcg tcctggaccg tcttactcag cacgagcgtt
      481 tacctcctcg atgttttgtg cctcatttct ggcctctact atagctattt tgtccttcat
      541 caacccgtac agctcgtaca ccagccctac tatctgccgg tctttggcgg agaattgggc
      601 cagggctaat tacgctccgg cccttcttgc ctctattcac ccaagctcgt agtaggggac
      661 gttctccgag gttgggcgca gaaaggtagg gtggggatgt ggaccccacc ccgatcacta
      721 acccttcttg gcgatgtagt agctgttcta aaagtcgtga ggcagcgtgt tggtcccgaa
      781 acacaaaact acctgagcta ggtttccacg ctgttctggg cgatggcacc cgcgaggtgc
      841 gcttggagcg gctgctcacg cggtaggact cttggttacc agcagccgga acaccggcgt
      901 ccacgtgcac tcctcaaagt cacctagctg cccagaggga gggttctcgg aaggtcgctg
      961 aaactcggct tgttagatcc accgacgcac ttgcgccttg tagttcacgt attcctcgcc
     1021 aaaggtgcgt tccaagtaac gctcctcgcg ctcgatcacc tcacgctgta tcacgtacac
     1081 caccaacggc aagagtagga tggcccacag cgcattccga agaacggcta tcccagggta
     1141 gatcattgcc agggccacat agccagggtt gcggctgtag cggaacggcc cattctggac
     1201 caggctggat acgggcttgt cgatgcggat cgtggtgacg actctgcgca tcgagcgaac
     1261 gatcacgctg cgagcgccat cccgcctccc aaaagc
//
LOCUS       DASQSL010001484         1077 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_65394, whole genome shotgun sequence.
ACCESSION   DASQSL010001484 DASQSL010000000
VERSION     DASQSL010001484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65394"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            166..453
                     /locus_tag="VE844_15185"
     CDS             166..453
                     /locus_tag="VE844_15185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02643.1"
                     /translation="MTAGLLIALVVLVAIALIEPMISGTLFGPGGMWEDTDRAAGWAL
                     GLLAGFGGLSMLATPAALIVGIVLLVRWLGSSSTGPHWEAQERIGGLETRR"
     gene            554..>1077
                     /locus_tag="VE844_15190"
     CDS             554..>1077
                     /locus_tag="VE844_15190"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020211321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HZC02644.1"
                     /translation="MKTPRSLKVLAISGGSLLFLALVMAVVGYLLAPHSYLMRAIFWG
                     ESDYKDLEKFPARSIHHVPPVSRFEELPAEDSYASQIETIGRDVNNGGSLENYLDASG
                     TTAFLVIRNDKVLYERYFNGYDQRSVNTSFSMAKSFASALVGIAIDEGHIKSIDEPIT
                     NYIPELLEKDKRFRS"
BASE COUNT          236 a          295 c          314 g          232 t
ORIGIN      
        1 acccccattt cgtaccgctt cagggtaaca ccttgctcct gcctccgata cgcaacgatt
       61 ccaccttctg ttccacttta gggtgatgac cttcctttca ccacgccata gagtggtgca
      121 agcaaagccg gataaagaaa ggaaggcgag aagtcgtgaa gagtgatgac cgcgggactc
      181 ctgatcgcgc tggtggtgct ggtcgctatc gctctgatcg agcccatgat cagcgggact
      241 ttgttcggtc cgggcggtat gtgggaggac accgaccgtg cggcgggatg ggctcttggg
      301 ctgttggcgg gtttcggagg actctccatg ctcgcaaccc ccgctgccct gatagtaggc
      361 atagttctgc tggtacgctg gttgggcagc tcgtccaccg gtccgcattg ggaagcgcaa
      421 gaaaggatag ggggattgga gacccggcgt tagagaccct acggcaacgc tatgccgcgg
      481 gcgaggtctc caaggaggag tataagaaca tacgtcaaac attagagcgg tgatcacctt
      541 tcggggagca gacatgaaga ctccgagaag tctcaaggtg ctggcaataa gcgggggttc
      601 gttactcttt ctcgcgctcg tcatggctgt tgttgggtat ctattggcac cgcactccta
      661 cctgatgcgg gccatcttct ggggggaatc agactacaaa gacctcgaga agttccccgc
      721 tcgcagtatc catcacgtgc ctcccgtctc tcgcttcgaa gagttgcccg cggaggattc
      781 gtacgcctca cagattgaaa ccatcggacg tgatgtcaac aatggaggta gcctcgaaaa
      841 ctacctcgat gcgagcggga cgacagcttt cctcgtgatc cgcaacgaca aggtgctcta
      901 cgagaggtac ttcaacggct acgaccagcg ttccgtaaac acgtccttct cgatggccaa
      961 gtcgttcgct tcggcgctcg tcgggatcgc gatcgacgaa gggcacataa agagcattga
     1021 cgagcccatt accaactaca tccccgaatt gcttgagaaa gacaagcggt ttaggtc
//
LOCUS       DASQSL010001485         1208 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_170637, whole genome shotgun sequence.
ACCESSION   DASQSL010001485 DASQSL010000000
VERSION     DASQSL010001485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1208
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170637"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1208)
                     /gene="urtB"
                     /locus_tag="VE844_15195"
     CDS             complement(<1..>1208)
                     /gene="urtB"
                     /locus_tag="VE844_15195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007040929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="urea ABC transporter permease subunit UrtB"
                     /protein_id="HZC02645.1"
                     /translation="INNQLRRTLRGAIARLSLSSKEAERRLTAVQEIIHDLDEQASEL
                     LHAALAKEEDTEVREALATGLALIELDSPNPAIRRVAIERLSGSLNPTVRNRLTALLN
                     ELPEQDERLRAAVRGALNAIELKLGLYRLIETLFFGLSLGSVLVLAAIGLAITFGVMG
                     VINMAHGELIMLGAYTTYVIQLLMPNHIDLSLFIAVPAAFMVSALFGIAIERGVIRFL
                     YGRPLETLLATFGVSLILQQLVRTIFSPLNRSVFTPAWMSGSLEINSALSLTYNRLYI
                     MVFGLLVFFALLVILKKTTLGLQVRAVAQNRAMARAMGVRTEWVDAITFGLGSGIAGV
                     AGVALSQITNVGPNLGQAYIIDSFMVVVFGGVGNLWGTLVGGLSLGVANKFLEPYAGA
                     VLAKILVLVF"
BASE COUNT          288 a          361 c          351 g          208 t
ORIGIN      
        1 aaagaccagg accaggatct tggccagtac tgccccggca taaggctcaa gaaacttgtt
       61 ggcgacgccg agcgacaggc caccgaccag cgtgccccaa aggtttccca ccccgccgaa
      121 gaccaccacc ataaaggaat cgatgatata cgcctggcct aagtttggcc cgacattggt
      181 gatctggctc agcgccaccc ccgccacccc cgcgatcccg gatccgaggc caaaggtgat
      241 ggcgtcgacc cactcggtac ggacgcccat ggccctggcc atagcccggt tctgggcgac
      301 ggcgcgcacc tggaggccca gcgtggtttt tttcaggatc acgagcaagg caaaaaatac
      361 cagtagaccg aagaccatga tgtagaggcg gttatacgtc agcgacaagg cgctgttgat
      421 ctcaagcgat ccgctcatcc aggcgggtgt gaaaaccgag cggttcaaag gcgagaagat
      481 cgtgcgcacc aattgttgca ggatgaggct cacgccaaac gtggcaagta gcgtctccaa
      541 gggccggcca taaagaaaac gaatgacacc ccgttcgatg gcgataccga atagagcgga
      601 gaccatgaat gccgcgggca cggcgataaa caaggacaga tcaatatgat tgggcattaa
      661 caactgaatc acataggtcg tgtaggcacc gagcatgata agctcgccgt gggccatgtt
      721 gatgaccccc atcaccccaa aggtgatggc gagcccaatc gccgcaagca cgagcaccga
      781 tcccaggctc aatccaaaga acagggtctc gataaggcgg taaagcccaa gcttgagctc
      841 aatcgcgttc agggcccccc gcaccgccgc acgcagcctc tcatcttgct caggcaactc
      901 attcaatagg gccgtgagcc ggttacgtac ggtgggattg aggctgccac tcagccgctc
      961 gatagccacc cggcggatgg caggattggg gctatcgagc tcaatgaggg ccaggccagt
     1021 tgcgagggcc tcacgtacct cagtatcttc ctccttggcg agcgctgcat gcagaagttc
     1081 gctcgcttgt tcgtcgaggt catggatgat ctcctgtacg gccgtcagac gccgctcggc
     1141 ctctttactg gagaggctca gccgggcgat ggcaccgcgc aaggtgcggc gcaactgatt
     1201 gttgataa
//
LOCUS       DASQSL010001486         1222 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_105277, whole genome shotgun sequence.
ACCESSION   DASQSL010001486 DASQSL010000000
VERSION     DASQSL010001486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1222
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105277"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(16..525)
                     /locus_tag="VE844_15200"
     CDS             complement(16..525)
                     /locus_tag="VE844_15200"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02646.1"
                     /translation="MLDETLVTETPPLYSCYGHRGEQVQVPISGNRAKRVIHGALNIR
                     TGAVLLLITEVWDQLTHQYFLHMIRAHWWGWHIILFEDRGSPHTADDSLALAAELQIQ
                     LRFLPVATPELNAMDHLWRHVKRDVLSNRPTCSIDVSADIACQYLLNLSPQQRLKKAG
                     VLSGNFWLE"
     gene            complement(531..1064)
                     /locus_tag="VE844_15205"
     CDS             complement(531..1064)
                     /locus_tag="VE844_15205"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC02647.1"
                     /translation="MAVINLTNRDYRRISEIVRLTRDVRVVKRAQALLWLSEGDTPEE
                     VADRLWVTPRTIYRWVERFERRDDWPLAERLADAPRSGRPDTVAQRLDPLIEQLMDDG
                     PENHGYAATVWTAPLLHQHLKNVHYLDTSQRSVSRALERLELSWKRPRHCLVRRSPTW
                     RQAKGGSSAGLPSAHAP"
BASE COUNT          265 a          363 c          328 g          266 t
ORIGIN      
        1 cacaaggacg ctgcgctatt ccaaccagaa attgcctgac aagacgccag cctttttgag
       61 acgttgttgc gggctgaggt taagcaggta ctgacaggcg atatcagctg agacatcgat
      121 cgagcaggtc ggccgattgg acaacacatc gcgtttaaca tgccgccaca gatgatccat
      181 ggcattcagt tcgggcgtag ccacgggcag aaagcgtagc tgaatttgca actcagcggc
      241 caatgccagg ctgtcgtcgg cggtatgtgg cgagccgcga tcctcaaaca atataatgtg
      301 ccaaccccac caatgggccc gaatcatgtg cagaaagtac tgatgggtta gctggtccca
      361 cacctcagta atcaacaaca gcaccgcgcc tgtgcggata ttgagcgcgc catgaatgac
      421 ccgcttggcc cggttaccgc tgatgggcac ttgtacctgc tcgccgcgat ggccgtaaca
      481 actgtatagc ggcggggttt cggtcaccag cgtctcgtcc aacatcacga ttagggtgcg
      541 tgagcgctcg gcaagcccgc gcttgagccc cctttagctt ggcgccacgt cggcgagcgc
      601 cgcaccagac aatgacgcgg tcgtttccag cttagctcca agcgctccag cgcccgactg
      661 acgctacgct gagaggtgtc caagtaatgg acgttcttta agtgctggtg cagtaacggc
      721 gctgtccata ccgtcgcagc atagccgtgg ttttcaggac cgtcgtccat aagttgctca
      781 atcagtggat caagccgctg cgccaccgta tccggccgtc cactacgcgg tgcatcggcc
      841 agtcgttccg ccagcggcca gtcgtcacgt ctctcaaagc gttcgaccca gcggtaaatc
      901 gttcgcggcg tcacccacaa ccgatcagct acctcctcgg gcgtatctcc ctcgctcagc
      961 cacaacaacg cctgcgcccg cttcactacc cgcacatcgc gggtcaaccg cacaatttca
     1021 gatattcgtc ggtaatctct gttagtaaga ttaatcactg ccatcgataa taccactgac
     1081 tgcagaggtt cttgtcaatg tctcagttta tatgtgacag aacttttggc aacctactta
     1141 gcaagttcct gggcgtgcgt gcgattgatg cctcgcatga ataggggagg ttgttcaatg
     1201 gagtcttggt ccgcatgctg ga
//
LOCUS       DASQSL010001487         1615 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_198285, whole genome shotgun sequence.
ACCESSION   DASQSL010001487 DASQSL010000000
VERSION     DASQSL010001487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1615
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198285"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..820
                     /locus_tag="VE844_15210"
     CDS             <1..820
                     /locus_tag="VE844_15210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005958624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HZC02648.1"
                     /translation="IDVSERLLEAGLNVPEVLAQDLEQGFLLLTDLGCDLYLTLLSPE
                     TVERLYADAIKRLVTMQKQARIAYLPPYDRRLLREEVELFRVWLVGKELGIALNPQQH
                     KLLDRAFALLADSALAQPQVFVHRDYHSRNLLYTAQNNPGILDFQDAVLGPVSYDLVS
                     LLRDCYIHWPIEQVEAWAFGYYEQARQAGLIPHISADLFLRWFDLMGVQRHLKASGIF
                     ARLWHRDGKPGYLPDVPRTLSYIVEVGPKYPQLKELHQLLIERILPALAQRSSL"
     gene            817..1497
                     /locus_tag="VE844_15215"
     CDS             817..1497
                     /locus_tag="VE844_15215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003450733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HZC02649.1"
                     /translation="MRAMILAAGKGERMRPLTQHIPKPLLRAGGKALITYQIERLVQA
                     GITEMVVNHGNYGDQIEALLGDGSRFGASIHYSPEGDEPLETGGGIFKALPLLGSGPF
                     IVVNADVWCDYPLSRLLTPPWGLAHLILVDNPDHHPEGDFALVEGCVLLTASPRLTFS
                     GIGVYRPALFDECNSGRFSLAAVIRKAASWGLVTGEHYRGMWIDIGTPERLAQLDASL
                     QGDLRVPC"
     gene            complement(1480..>1615)
                     /locus_tag="VE844_15220"
     CDS             complement(1480..>1615)
                     /locus_tag="VE844_15220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018398136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="endonuclease V"
                     /protein_id="HZC02650.1"
                     /translation="ISIGHRVSLPTAIDYVMACVTRYRLPETTRWAHRLVSSASAGHP
                     "
BASE COUNT          303 a          461 c          477 g          374 t
ORIGIN      
        1 tatcgatgtc tccgagaggc tattggaggc cggactgaac gtgccagagg tgctcgcgca
       61 agatcttgag cagggatttt tgctgttgac cgatctcggt tgcgatcttt atctcacgct
      121 cttgagccct gaaaccgtgg agcgcctgta tgccgatgcc attaagcgct tagtgactat
      181 gcagaaacag gctcggatcg cttatctccc gccctatgac cggcgactcc tgagagagga
      241 ggtggagttg tttcgagtat ggctggttgg caaagagctc ggcatcgcct tgaaccccca
      301 gcaacacaag ctgctcgatc gcgccttcgc cctgcttgca gactcggcgc ttgcgcaacc
      361 gcaggtcttt gtccaccgtg attatcactc gcgtaatctc ctctataccg cacaaaacaa
      421 cccggggatc ctggattttc aggacgcggt gcttggaccc gtgagctacg atctcgtctc
      481 cctgctccga gattgctata tccattggcc catcgaacag gtggaggctt gggccttcgg
      541 ctattacgaa caggcccggc aagccggtct catccctcac atcagtgccg atttgtttct
      601 gcgctggttt gatcttatgg gtgtgcagcg gcacctgaag gccagtggga tcttcgcccg
      661 cttgtggcac cgtgatggta aaccggggta tctccccgat gtgcccagga ccttgagcta
      721 catcgtcgag gtgggtccca agtatccaca gcttaaagag ctgcatcaat tgttgattga
      781 gcgtatacta ccggccttag cccagcgttc ttcgctatga gagccatgat cctggcggcg
      841 ggcaaagggg agcggatgcg cccgttgacc cagcatatcc caaagccctt gctcagggcc
      901 ggcggcaagg cgttgatcac ctatcagatc gagcggctgg tgcaggcagg gatcaccgag
      961 atggtcgtta accacggcaa ctatggagac cagatcgagg ccttgttggg cgatggcagc
     1021 cgctttggcg cctccatcca ctattcgcct gagggtgatg agcctttaga gaccggtggc
     1081 ggtatcttta aggctctgcc gctgcttgga tcgggtccgt tcatcgtggt caacgccgat
     1141 gtctggtgtg attaccccct ctcccgcttg cttaccccac cctggggact ggcgcatttg
     1201 atcttggtcg ataatcctga ccatcatccc gagggagatt tcgccctggt tgagggctgc
     1261 gtattattga ctgcctcacc tcggctgacc ttcagcggca tcggtgtcta ccggcctgcc
     1321 ttgttcgatg aatgcaacag cgggcgcttt tctctcgccg ccgtgatccg caaagcggct
     1381 tcctgggggc tggttacggg cgagcattac cgggggatgt ggatcgacat aggtacaccc
     1441 gagcgattgg cccagttaga tgcgagcttg caaggcgatt taagggtgcc ctgctgaggc
     1501 ggaactgacc aaccggtgcg cccagcgcgt ggtctccggc aatcggtaac gggtaacaca
     1561 ggccatcaca taatcgatcg ccgtcggcag gctgacgcga tggccgatcg agata
//
LOCUS       DASQSL010001488         1294 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_25034, whole genome shotgun sequence.
ACCESSION   DASQSL010001488 DASQSL010000000
VERSION     DASQSL010001488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1294
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25034"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..208
                     /locus_tag="VE844_15225"
     CDS             <1..208
                     /locus_tag="VE844_15225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02651.1"
                     /translation="RCRGLRQQAYPPKECVEQEFSELRVQGVLGTWPGRVMSGDDIQE
                     EGQDIGPGPLGCPLQGYKALVRSS"
     gene            complement(195..983)
                     /locus_tag="VE844_15230"
     CDS             complement(195..983)
                     /locus_tag="VE844_15230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02652.1"
                     /translation="MITTNTEKIGRTAREMAEVQRDSYEALAENFAAAQSRSIGLAND
                     GLKFMRLQEDNARAAQEWFANGVKLLQLQGRNAELVQGWTGDAVEVVREQSEHNVRTV
                     EAFARSASKQQESLQALSQGWVGAYREFFSPLAYVQEGMKTFQRATQQGLQATQQIAR
                     QGLQATEQVTRQGLRVAEEATERTDDVLRQTEKATRQAELEAAVLGALKSANYDELTV
                     DEISEKLDGLSTEQLKQVREYEKQNKDRETLIGLIDRKIRVKNS"
     gene            complement(1083..>1294)
                     /locus_tag="VE844_15235"
     CDS             complement(1083..>1294)
                     /locus_tag="VE844_15235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02653.1"
                     /translation="ARALFSSVDMNVFLSQRAGDSSELRCVIQGYHCSKRRKLGTSII
                     WRIFAVARALLDVANFGEFLFYALG"
BASE COUNT          240 a          396 c          368 g          290 t
ORIGIN      
        1 ccgctgtagg ggcctgcggc aacaggctta tccacccaag gagtgcgtgg aacaggaatt
       61 ctcggaactt cgagtgcagg gggttctcgg aacttggcca ggacgggtaa tgagtgggga
      121 tgacatacaa gaagagggcc aggacattgg tcccggccct ctgggttgcc ctctacaagg
      181 ctacaaggcc ttggttagga gttcttgacc cttatcttgc ggtctatcag cccgatgagg
      241 gtctcgcggt ccttattctg cttctcgtac tcgcgaacct gcttgagctg ctcggtggaa
      301 aggccatcga gcttctcgga gatctcatcg acggtcaact catcgtagtt agcactcttc
      361 aatgcaccca agacagcggc ctcaagctcg gcctggcggg ttgccttctc ggtctgacgg
      421 agtacgtcat cggtccgctc ggtggcctcc tcggcaaccc taagcccctg gcgggtgacc
      481 tgctcggtgg cctgcagtcc ctgccgggcg atttgctggg tggcctgcag cccctgctgg
      541 gtggcccgct ggaaggtctt catgccctcc tgcacatagg ccaaggggga gaaaaactcc
      601 ctgtaggccc caacccaacc ctggctaaga gcctgcaagc tctcctgctg cttgctggcg
      661 ctgcgcgcga aagcctcgac ggtgcgcacg ttgtgctcgc tctgctcacg cacaacctcg
      721 acggcgtcgc cggtccagcc ctgcacgagc tcggcattgc gcccctgcag ctggagtagc
      781 ttgacaccgt tggcgaacca ctcctgggcc gccctggcgt tgtcctcttg caacctcatg
      841 aacttgagcc cgtcgttggc tagcccgatg ctgcggctct gggcggccgc gaagttctcg
      901 gcgagagcct cgtaggagtc gcgctggacc tctgccatct ctcgggcggt gcgccctatc
      961 ttctctgtgt tggtggttat cactcgtgtg cctccatggt tgtaagctat tgccactatg
     1021 ttcttatcac acatatattc aacttcaagg atcgaatcgt cacgccgccg gtaattccct
     1081 atttacccaa gtgcgtagaa caggaattct ccgaagttcg caacgtctag caacgcccta
     1141 gcaaccgcaa agatacgcca aatgatggat gtgcccagtt ttcggcgctt gctacagtgg
     1201 tagccttgta taacgcagcg gagctctgag gaatcccccg ccctttggga aaggaacacg
     1261 ttcatgtcaa ctgaagaaaa caaagctcta gccc
//
LOCUS       DASQSL010001489         1400 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_91086, whole genome shotgun sequence.
ACCESSION   DASQSL010001489 DASQSL010000000
VERSION     DASQSL010001489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1400
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91086"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            42..1052
                     /locus_tag="VE844_15240"
     CDS             42..1052
                     /locus_tag="VE844_15240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HZC02654.1"
                     /translation="MLKVDIHTHLLPPQWPDLKERYGYGGFVQLDHYGEGRARLLKDG
                     EVFREIEANCWDPPVRLRECDHYHVDVQVVSTVPVMFSYWAKPDHTLDLCRYLNDHIA
                     GVVQAYPKRFVGLGTLPLQAPELAIQELERCIRELGLAGIEIGSHVNRWNLDDEYLFP
                     VFEAAQALGAAVFVHPWDMLGKERMPKYWLPWLVGMPAETSLAICSLIFGGVLERLPE
                     LRIAFAHGGGAFPATLGRIEQGFKVRPDLCAVDNAMNPRAYLHRIYFDSLVHDPLMLR
                     YLLDLVGAERIALGSDYPFPLGEEEPGRLIESVDLDDLTKARLLHGTALEWLNLSKDR
                     FC"
BASE COUNT          264 a          433 c          407 g          296 t
ORIGIN      
        1 tgcggagcgg tgatgccggc gcccgggcaa tagcgccccg catgctcaag gtcgacatcc
       61 acacgcacct cctgcccccg cagtggcccg atctcaaaga acgctacggt tacggggggt
      121 tcgtacagct cgatcactac ggtgaggggc gtgcgcgcct gctgaaggat ggcgaggtct
      181 tccgcgagat cgaggccaat tgttgggatc ccccggtgcg gttgcgtgag tgcgaccact
      241 atcacgtgga cgtgcaagta gtgtccaccg tgccggtgat gttcagctat tgggccaagc
      301 cggatcatac cctcgatctc tgccgctacc tcaacgatca catcgccggg gtggtccagg
      361 cctatcccaa gcgctttgtg ggtctcggga ctttaccgct gcaggccccg gagctcgcta
      421 tccaggaatt ggaacggtgc atccgagagc ttgggcttgc cggtattgaa ataggctcac
      481 atgtcaatcg ctggaacctg gacgatgaat acctatttcc ggtctttgag gccgcacaag
      541 cgctcggggc ggccgtcttc gtgcatccct gggacatgct cggtaaagag cgcatgccca
      601 aatactggct cccctggctg gtcggcatgc cggccgagac ctcgctcgcc atctgctccc
      661 tgatcttcgg cggggttttg gaacgcctgc ccgagttgcg gatcgccttt gcccacggcg
      721 ggggtgcctt tccagccacg ctaggccgca tcgagcaggg cttcaaggta cgcccggatc
      781 tctgtgcggt ggataatgcg atgaatcccc gcgcctacct gcaccgcatc tacttcgatt
      841 ccctggtaca cgacccgctc atgctgcgct atctcctcga tctggtgggc gctgaacgga
      901 tcgcactcgg atcggactat ccgttcccgc tcggtgaaga ggagccgggg aggctgatcg
      961 aatcggtcga tcttgatgac ttgaccaaag cccgtctgct ccacggtacg gccctggaat
     1021 ggctcaattt gagcaaggac aggttttgtt gatagctaac cttttatggc catttcagcc
     1081 accccgaact atgaaaatcc ctcctcaccc ccctttggaa aaggggggca gccgcatagt
     1141 gacgggggga tttgtcgagc acagcagggg acagtgtatt tttgcaagcg atctaacgct
     1201 cctgagacta aactccattt tcgtaaggag atgtcactat gaaccatcca cccgtgccca
     1261 ctataagccc cccggcacgt ccttcttctc atgctgcctc agcaggaggg acgccgcccc
     1321 tgaactcggg tgaccgcctc tcccgcgctg agttcgagcg gcgctatgga gcccacccag
     1381 agtttaaaaa agcggaactc
//
LOCUS       DASQSL010001490         1456 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_13203, whole genome shotgun sequence.
ACCESSION   DASQSL010001490 DASQSL010000000
VERSION     DASQSL010001490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1456)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1456)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1456
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13203"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..256
                     /locus_tag="VE844_15245"
     CDS             <1..256
                     /locus_tag="VE844_15245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02655.1"
                     /translation="YMGFLEHRDRKAGETKFQRMASSEQKKKLLKAKIAVALQDELGR
                     VPKEKEIDQVFFLTRVMYKAVLGLHFKWQEQKKNGQLAIF"
     gene            318..932
                     /locus_tag="VE844_15250"
     CDS             318..932
                     /locus_tag="VE844_15250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012663326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="master DNA invertase Mpi family serine-type
                     recombinase"
                     /protein_id="HZC02656.1"
                     /translation="MMYGYIRVSTDKQTTENQRFEILKFADEKKLRVDRWIEETISAT
                     KKLSHRKLGHLLDAMQEDDVLIVTELSRLGRSLMEVMSILHTLMEKEVKVLTTKERYE
                     LGHNISSKVLAFAFSLSAEIERSMISSRTKEALARKRSEGKRLGRPKGRLSSVTKLTG
                     KDDLIREYLDKKIPQSVIARLLNVHRLTVRNYIRTRKLQKPPAG"
     gene            1066..>1456
                     /locus_tag="VE844_15255"
     CDS             1066..>1456
                     /locus_tag="VE844_15255"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006379307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HZC02657.1"
                     /translation="MHTHVPSVLNRFVAAAAAALLTFGFEMASARHEEEGSLPRALER
                     FVAQAGGPPGIVVVVARGESIDVHTAGVANLESERPIRLNEHMRLASVAKAFSGAAAL
                     ALVARGHLSLDDTIGQWLPDLPQSWWPV"
BASE COUNT          332 a          434 c          422 g          268 t
ORIGIN      
        1 atatatgggt tttcttgaac atcgagatag aaaggcgggt gagacgaaat ttcagcgtat
       61 ggcatccagt gagcagaaga aaaaactctt aaaagccaaa atcgcggtgg ccttgcagga
      121 tgaactcggc agagtcccca aggagaagga gattgaccag gtctttttct taacgcgggt
      181 gatgtataaa gcggttttag gtctgcactt caaatggcag gagcagaaga agaacgggca
      241 gctcgcgatt ttctaacagg gccctacctg tataatttta tcgccccttt tccctatact
      301 aagataacct aatgcctatg atgtacgggt atatccgggt ctccaccgac aagcaaacca
      361 cggaaaacca gcggtttgaa atcctcaaat tcgcggatga gaagaaactc cgcgtggatc
      421 gctggattga ggaaacgatc agcgccacca agaagctctc ccaccgcaaa ctcggccacc
      481 ttcttgacgc catgcaggaa gacgatgtgc tcatcgtcac ggaactctcg cgcctcggcc
      541 gctccctcat ggaggtgatg agcattctcc ataccctcat ggagaaagag gtcaaggtgt
      601 tgaccaccaa ggagcgctat gagctgggcc ataacatctc ctccaaagtg ttagcctttg
      661 ccttctccct ctcggcggag atcgagcgct ccatgatctc ctcccgcacc aaagaggcct
      721 tagcccgaaa gcgcagcgag ggcaagcgct taggccgtcc caaaggccgg ctctcttcgg
      781 tcaccaagct caccgggaaa gacgatctta tccgggagta cctggacaag aagattccgc
      841 agagtgtcat tgcccggctg ttaaacgtgc accggctgac agtccgaaac tacatccgca
      901 cccgcaagct ccagaaacca ccagctggtt gaaaatgtgg ctcctgcagg ggggtgtcgg
      961 cgaaacacca gtgtgcaacc gagagccacg aactgcgagc cgaacctcgc gccgccaacc
     1021 accccggcgg tgatcaggtc aggccgcgcg tcgacggagg agaccatgca tacacacgta
     1081 ccctcggtgc tcaatcgctt cgtcgcggcc gcggcggccg cgctcctaac attcggcttc
     1141 gagatggcgt cggccaggca tgaggaggag gggtcgctgc cgcgcgcgct ggaacgcttc
     1201 gtcgcgcagg cagggggtcc gcccggcatc gtcgtggtcg tggctcgtgg cgagtcgatc
     1261 gacgtgcaca ccgccggggt cgcgaacctc gaatcggagc ggccgatccg cctcaacgag
     1321 cacatgcgcc tcgcgagtgt cgcgaaggcg ttcagcggcg ccgcggcgct cgcgctcgtg
     1381 gcgaggggac acctctccct tgacgacacg atcggccaat ggctgcccga cctgccgcag
     1441 tcttggtggc ccgtga
//
LOCUS       DASQSL010001491         1674 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_116173, whole genome shotgun sequence.
ACCESSION   DASQSL010001491 DASQSL010000000
VERSION     DASQSL010001491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1674
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116173"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(73..753)
                     /locus_tag="VE844_15260"
     CDS             complement(73..753)
                     /locus_tag="VE844_15260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004067244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02658.1"
                     /translation="MHAVCETYRHAAERHEQGIHTVSLDEKTGRQALARLHPTRQTKR
                     SLVEREEYEYERHGTLTLIANFEVATGRVIAPTLGPTRTEDDFARHLETTLNTDPEAQ
                     WIFVADQLNIHKSESVVRLITERCELDIDLGVKGQSGILKSMASRAAVLQKADHRIRF
                     VYTPKHTSWLNQVEIWFSILARRLLKRASFTSVEDLKKRVLAFIAYFNATLAKPFKWT
                     YKGRPLAA"
     gene            complement(779..1348)
                     /locus_tag="VE844_15265"
     CDS             complement(779..1348)
                     /locus_tag="VE844_15265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019503413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC02659.1"
                     /translation="MTLPGEAMMPGPKPLSVILSKKQRALLERLKRRQTSPQRLVRRV
                     DTILAAADGANNESIAHQLGLNRTTVWTWRQRWRAGAEALDAAEAAGDADKALLGRIE
                     AILDDAPRSGSPGDFSAEQLAQLISVACESPEDCGRPVTHWTPRELADEVIKRGIVAR
                     ISPRTVGRFLKGGRSQAASLDLLAQSSAR"
BASE COUNT          357 a          511 c          460 g          346 t
ORIGIN      
        1 tgcgcgaaac cgagtggcgt cttagccgtt ggcggattac cctagtacag cctggcagaa
       61 attcctcatc ggttaggcgg ccagcggacg gcccttgtac gtccatttaa aaggcttagc
      121 caatgtggca ttgaaatacg caatgaacgc cagcacccgc ttcttgagat cctcaaccga
      181 agtaaaactg gcccgtttca acaaccgacg tgccaggatg ctaaaccaaa tctccacttg
      241 attgagccac gaggtgtgct tgggcgtgta cacaaaccga atccggtggt cggccttttg
      301 aagaaccgcc gcgcgagacg ccatcgattt caaaatgccg ctttgaccct tcactcccaa
      361 gtcgatatcc aactcacagc gctcggtgat caagcggacc accgactccg acttatgaat
      421 attgagctgg tcggccacga aaatccactg cgcctcaggg tccgtgttga gggtcgtctc
      481 cagatgccgg gcaaagtcat cctccgtgcg ggtcggaccc aaggtcggag caatcacccg
      541 gcccgtggcc acctcgaaat tggcgatcaa cgtcagggtg ccgtgccgct catactcata
      601 ttcctcgcgc tctaccagac tccgtttcgt ctggcgcgtc gggtgcagac gcgccaaggc
      661 ttgcctcccg gtcttttcat ccagactgac cgtgtggatg ccttgctcat ggcgctccgc
      721 cgcgtgacga taggtctcac acaccgcgtg caccgccgca tcgaaggcgg cggggtcctc
      781 atcgcgctga tgattgagcc agtagatcga gcgatgcggc ttgagatcgg cctcctttta
      841 aaaaacgccc tacggtgcgg ggcgaaatcc tcgcgacaat gccccgtttg atgacctcat
      901 cggccagctc ccggggcgtc caatgggtca ccgggcgacc gcaatcctcg ggcgattcac
      961 aggccaccga gatgagctgg gcgagctgtt ccgcgctgaa gtcccccggc gaaccggacc
     1021 ggggggcatc gtcaaggatc gcttcaatcc ggcctagcag agccttgtcc gcatcgccag
     1081 cggcttcggc tgcatccaga gcctcggcac cggcgcgcca gcgctgccgc cacgtccaca
     1141 cggtggtacg gttaaggccg agctgatggg caatcgactc attgttggcg ccatcagccg
     1201 cagccaaaat cgtgtcgacc cgacgcacga gccgttgcgg gctcgtctgg cgtcgcttca
     1261 ggcgctctaa gagcgcccgc tgtttcttac tcaagatcac agaaagcggc tttggaccgg
     1321 gcatcatcgc ctcgcctggc aaagtcatcg ggttgtctac ctgtctctcg cttccaggta
     1381 taacacaatt caaaccgttg aagaactttt gccaggctgt actagcgata ttttccaagg
     1441 tgataattcg agcatcgttg acaatgtgct cccaagatgg tctgactcct cgctgagttg
     1501 atggaaacga gaaatcaaca ccgcaataaa tacagcttgt gtcgcgcgct agcacttgac
     1561 gctcaaacca ttcggggata ttccatcgat tcaacgaaaa gtcctcagtt cggttctgaa
     1621 ggcacccaac gctaaagttg agctgctggc cacaggggag ggagtctaag aatg
//
LOCUS       DASQSL010001492         1045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_160809, whole genome shotgun sequence.
ACCESSION   DASQSL010001492 DASQSL010000000
VERSION     DASQSL010001492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160809"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1045
                     /gene="hslU"
                     /locus_tag="VE844_15270"
     CDS             <1..>1045
                     /gene="hslU"
                     /locus_tag="VE844_15270"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018049197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HZC02660.1"
                     /translation="EAKRAVAIALRNRWRRQQLPAELRDEVAPKNIIMIGPTGIGKTE
                     IARRLAHLTRSPFLKVEASKFTEVGYVGRDVESMIRDLTELAKNLVREEEAKQIEDKA
                     RINAEERLLDLLLPVPPARRKPGEGAVGLDPLGQEQYQQTREKFRQYLRDGKLDNRDV
                     ELEVEERSMPFIEVISGSGLEDMDINIKDMLGNMFPQRKKRRKAKVPEALDILAQEEA
                     QKLIDMDKVVKEAIKRVEQAGIVFLDEIDKIAGRERNFSGPDVSREGVQRDLLPIIEG
                     STVNTKYGMVRTDHILFIAAGAFHVSKPADLIPELQGRFPIRVELYPLGKDDFVRILT
                     EPQNALIKQYKALL"
BASE COUNT          248 a          314 c          302 g          181 t
ORIGIN      
        1 tagaggccaa gcgcgccgtg gcgattgccc tacgcaaccg ctggagacgc cagcaattgc
       61 ccgcggaatt gcgcgatgaa gtggccccga aaaacatcat catgatcggc cccacgggca
      121 ttggcaagac cgagatcgcc cgccgtctgg cccacttgac acgctctccc ttcctcaagg
      181 tggaagcctc caaatttacc gaggtgggct acgtcggccg cgatgtcgaa tcgatgatcc
      241 gcgatctgac cgagttagca aagaatctgg tgcgcgagga ggaagccaag cagatcgaag
      301 ataaagcccg catcaatgcc gaagagcgtc tcctcgatct gttgctcccc gtccctcctg
      361 cccggcgcaa accgggtgaa ggggcggtgg gcttggaccc gctcggccag gagcagtatc
      421 aacagacgcg cgaaaagttc cggcagtatc tacgggatgg caaactggat aaccgcgacg
      481 ttgagctgga ggtggaagag cgcagcatgc cgttcatcga ggtcatctcc ggctctggcc
      541 tcgaggacat ggacatcaac atcaaagaca tgctcggcaa tatgttcccg cagcgcaaga
      601 aacgccgcaa ggccaaagtc ccagaggcct tagacattct ggcacaagag gaagcccaaa
      661 agctgatcga catggataag gtcgtcaaag aggcgatcaa acgcgtggaa caagccggca
      721 tcgtgtttct ggatgagatc gataagatcg ccggacgtga acgcaacttc agcggcccgg
      781 acgtctcgcg tgagggcgtg cagcgcgatc tgctgccgat catcgagggc tcgaccgtca
      841 atactaagta tgggatggtg cgcaccgacc acatcctctt cattgcggcc ggggccttcc
      901 acgtctccaa accggccgat ttaatcccgg agctccaggg ccgtttcccc atccgagtcg
      961 agctgtaccc gctcggcaag gacgatttcg tgcgcatcct cacagagccc caaaacgcct
     1021 tgatcaagca gtacaaagcc ttgct
//
LOCUS       DASQSL010001493         1155 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_35210, whole genome shotgun sequence.
ACCESSION   DASQSL010001493 DASQSL010000000
VERSION     DASQSL010001493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35210"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..734)
                     /locus_tag="VE844_15275"
     CDS             complement(<1..734)
                     /locus_tag="VE844_15275"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HZC02661.1"
                     /translation="MWTRRDMLRQTGAAAVLATTTPWWMIRRAHGARQHKLVVWNPAA
                     LAPQVDKIMKEQCYAYAKQAGIKDNEIDYSTIGSAQLLSKLVASLEAGNPPDITRLGS
                     GAVQSYRVPGHLLEVTDLVEKMQKVEGGLFQASLDTVMYKGKAYGVPQSVSPRPLITR
                     LDILEAGKVEPPKTWEALVEVCKKLQKPPKLTGLGMCLGLYSDASNGIMNVIWSYGGQ
                     LIGADKKTVALNSPETVAAVKFIAEM"
BASE COUNT          248 a          351 c          317 g          239 t
ORIGIN      
        1 tacatctcgg caatgaactt caccgcggcc accgtctccg gtgagttcag cgccacggtc
       61 tttttatccg ctccgatgag ctgcccgcca taggaccaga tgacattcat gataccgttg
      121 ctggcatcgc tatagagacc cagacacatg cccaaacccg tgagcttggg gggcttttgc
      181 agttttttgc agacctcgac caacgcctcc cacgttttgg gcggctcgac cttgcccgct
      241 tccaggatat ccaggcgggt gatcagcggc cgtggactga cggactgtgg cacgccatac
      301 gctttccctt tatacatgac cgtgtcgagg gaggcctgga agagcccacc ctcgaccttt
      361 tgcatcttct caaccagatc ggtcacctcg agcagatggc cagggacacg gtaggactgc
      421 acggcgccag agcccaggcg ggtgatgtcc ggcggattcc ccgcctcgag ggaggccacc
      481 aacttggaca ggagttgagc gctgccaatc gtagaatagt cgatctcatt gtctttgatg
      541 cccgcctgtt tggcgtaggc gtagcactgt tccttcatga ttttgtcgac ctgtggggcg
      601 agggcggcgg gattccacac caccagcttg tgctggcggg cgccatgggc ccggcgtatc
      661 atccaccagg gcgtcgtcgt cgccagtacg gctgcggccc ctgtctgtcg aagcatatcg
      721 cgtcgtgtcc acatcaactt gtcccctcct tctccgacta cgtcatatct agtgttttac
      781 cacccttgtc aacgaggcca gacacaacct cggggagcct ctggttccca tcctgcaagc
      841 ggcaacctca cgttcatctg gaaaagtcca gagtgccagc aggatattgc tgaacaccta
      901 aggcggccgc aagacagaag agtcgtaggg acaaaacgga agccggctat caaaggagga
      961 gccagtcagc agaaaccagg cggagcaagc agcagatagc gcacagacag cgtcccgctt
     1021 cattctccct tggacctata ggggagaacc gtagcacatg aacaagcctt cactattgcc
     1081 cgaatgaccg gcaagatgca aagcatgggg cttaaatgct catgagccaa gatgtccata
     1141 tcaactcttg ccctg
//
LOCUS       DASQSL010001494         1126 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_116188, whole genome shotgun sequence.
ACCESSION   DASQSL010001494 DASQSL010000000
VERSION     DASQSL010001494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116188"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1126
                     /locus_tag="VE844_15280"
     rRNA            <1..>1126
                     /locus_tag="VE844_15280"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          292 a          274 c          365 g          195 t
ORIGIN      
        1 gttgaagcga gggtaagacc tcgtggagga ccgaaccgac ctaggttgaa aactgggcgg
       61 atgacctgtg ggtcggagtg aaaggctaat caaactcaga gatatctggt tctccccgaa
      121 atatatttag gtatagcgtc atgcgttcaa taccggttgt agagcactgt ttgggctagg
      181 gggcctacca gcttaccgac ctcaggcaaa ctccgaatgc cggtattcca gagcatggca
      241 gtcagagtgc gggggataag cttcgtgctc aaaagggaaa cagcccagac cgtcggctaa
      301 ggtccctaat ttctggctaa gtggtaaacg atgtccgatt gcagagacaa ccaggatgtt
      361 ggcttagaag cagcaaccat tcaaagagtg cgtaacagct cactggtcaa gtggtcgggc
      421 gcggataatg taacggggct caagctagaa accgaagccg cggacttcgc gcttgcgcgg
      481 agtggtaggg gagcgttccc aggccggcga agcagcggcg gaagcttgct gtggaggcct
      541 gggaagtgag aatgctggca cgagtaacga aagaggagtg agaaactcct ccgccgaatg
      601 cccaaagggt tcctgagtaa agcaaatctg ctcagggtta gtcgggacct aagccgaggc
      661 cgacaggcgt aggcgatgga caaccggttg atattccggt accacgttac ccaccgttat
      721 caccgatggg gggacgaggt aggttaagga agcccaggcg atggtcgtcc tggggtaacc
      781 gcgtagggcg tcccgtaggc aaatccgcgg gacatcaagc ctgaggcggg atgccgaggt
      841 ccgcaaggac cgaagtttcc gaagccatgc ctcccagaaa agcgtctagg gaggtgggac
      901 gtgcccgtac caaaaccgac acaggtaggc aggtagagaa taccaaggcg atcggaagaa
      961 ccctcgttaa ggaactcggc aaaatcgccc cgtaacttcg ggagaagggg cgccccggta
     1021 gggtgaaacc ccttgcgggt tcagcccgag ggggccgcag tgaaacggcc caagcgactg
     1081 tttaccaaaa acacaggtct ctgcgaagtc gaaagacgac gtatag
//
LOCUS       DASQSL010001495         1522 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_147765, whole genome shotgun sequence.
ACCESSION   DASQSL010001495 DASQSL010000000
VERSION     DASQSL010001495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147765"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..387
                     /locus_tag="VE844_15285"
     CDS             <1..387
                     /locus_tag="VE844_15285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012663326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZC02662.1"
                     /translation="GRSLMEVMSILHTLMEKNVKVFTTKERYELGNNINSKVLAFAFS
                     LSAEIERSMISSRTKEALARKKSEGKRLGRPKGRLSTVTKLTGKDELIREYLDKKIPH
                     TVIARLLNVNRLTVRNYIKTRKLDQG"
     gene            458..1465
                     /gene="corA"
                     /locus_tag="VE844_15290"
     CDS             458..1465
                     /gene="corA"
                     /locus_tag="VE844_15290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012932961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015087 - cobalt ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006824 - cobalt ion transport [Evidence
                     IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HZC02663.1"
                     /translation="MRKHTIAEGIEAMIVNCRVYEDGYRCPGEYTPETAARASHNNGA
                     FVWLGLYEPTPDEFESVRREFGLHELAVEDAIKAHQRPKLDRYGDSLFLVLKTARYVD
                     AKEVVEFGEILLFVGANFLVAVRHGEASGLQQVRQSLEARQDFLRLGPSAVLHAIVDR
                     VVDDYVPVIQGVEEDIEEVEEQVFSLDRTNPVERIYYLKREVLEFRRATAPLLTPLMQ
                     LSTQPLPHVCSEVRPYFRDVYDHLLRINEQIDAFRDLLTSVLEANLTQVSVRQNEDMR
                     KISAWVAIVAVPTMIAGIYGMNFQYMPELSHPLGYPIIMALIVSICVSLYVCFRRWHW
                     L"
BASE COUNT          346 a          425 c          416 g          335 t
ORIGIN      
        1 ggcagaagtc tcatggaggt catgagcatc ctgcacactt tgatggaaaa aaatgtcaaa
       61 gtctttacga ccaaagagcg ctatgaactg ggtaacaaca ttaattccaa agtgttagcc
      121 tttgcgtttt ccctctcagc cgagattgag cgctccatga tctcctcccg caccaaagaa
      181 gccttggcgc ggaaaaaaag tgagggcaag cgcttaggca gacccaaagg ccgcctctca
      241 accgtcacca aactcaccgg gaaagacgag ctcatccggg aatacctcga taagaaaatc
      301 ccccacacgg tgattgcgag actcttaaat gtcaaccggt taaccgtgag aaactacatc
      361 aagacccgga agctggatca aggatagcag ggggtgtcgt ggagcttttc tcccgtttgg
      421 tggagtttac ccaaagatgc cgaggggcca tccgccaatg cgcaaacata ccattgcaga
      481 agggattgag gccatgatcg tcaactgcag ggtctacgaa gatggatacc gttgccccgg
      541 tgaatacacg cccgagaccg cagcccgagc gagccacaat aacggcgcct ttgtgtggct
      601 cggcctctat gaaccgacac cagacgagtt cgagagcgtg cgacgcgagt tcggtctcca
      661 cgagttggcc gtggaagacg cgatcaaagc gcaccagagg cccaagctcg accggtacgg
      721 agattcgctg tttctggtgc tcaagacggc ccgttacgtc gatgccaagg aggtcgtcga
      781 attcggcgag atcctgctct tcgtgggggc gaactttctc gttgccgtgc ggcatggaga
      841 ggcaagcggt ctgcaacaag tgcgtcagtc tctggaagcg cgccaggatt tcttgcggtt
      901 gggtccgagc gctgtccttc acgccattgt ggatcgcgtc gtggacgatt atgtgcccgt
      961 tattcaaggt gttgaagagg atattgaaga agtcgaggaa caggtttttt cccttgatcg
     1021 gaccaaccca gtcgaacgga tttactacct caagcgcgag gtacttgaat ttcggcgcgc
     1081 cacggcaccc ctgcttaccc ctctcatgca gctgtcgacg cagccgctac cgcacgtgtg
     1141 ctcggaagtc cgtccctatt ttcgtgacgt gtacgatcac ttattgcgca tcaacgagca
     1201 gatcgacgcc tttcgggacc tcttgaccag tgttctcgag gccaatctca cgcaggtgag
     1261 tgtgcggcaa aacgaagaca tgcggaagat ctctgcctgg gtggccattg tcgccgtccc
     1321 cacgatgatc gccggcatct atggcatgaa ctttcagtac atgcccgaat tgtcgcatcc
     1381 cctgggctat cccatcatca tggcacttat cgtttccatc tgtgtcagtc tctacgtgtg
     1441 ctttcgtcgc tggcactggt tgtaacgcac ggttgcgccc atttcctctg gacactggca
     1501 cccaaacgtc tggtgaaccg gc
//
LOCUS       DASQSL010001496         2614 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_189966, whole genome shotgun sequence.
ACCESSION   DASQSL010001496 DASQSL010000000
VERSION     DASQSL010001496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2614
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189966"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(271..768)
                     /locus_tag="VE844_15295"
     CDS             complement(271..768)
                     /locus_tag="VE844_15295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012356943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HZC02664.1"
                     /translation="MLLEGSCHCGAVKFSVESYTPYPYMRCYCSICRKTAGGGGYTIN
                     IMGQANTLKVKGRKSISVYRALVDDEDHPGKKVQSQARRHFCKACGSALWIFDSRWPE
                     WVYPFASAIDTPLPKSPERQHIMLNYMAPWIAVPKGKRDVHFKEYPEEAIIDWHKQRD
                     LLLKA"
     gene            complement(810..2321)
                     /locus_tag="VE844_15300"
     CDS             complement(810..2321)
                     /locus_tag="VE844_15300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009146704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISKra4 family transposase"
                     /protein_id="HZC02665.1"
                     /translation="MQPAYTLIQGLEEFTAAREQFGSLVDQLQSKQVLRMEHGEVEEL
                     ITHEGTELLRRLLQGHLDRRTVKETKREEVKGSDGVLRRHVREACQRGLMTLFGEVTV
                     RRRGYGARGEESIFPLDGERNLPRDSYSHGLRRRLAEEVAGSSFDAAVLGLERTTGGK
                     VPKRQAEALAAQVSQDFEAFYASRGSDEPEPTLDPLVMSLDGKGIVMRREDLREATRR
                     AAEREQHKLKTRLSQGEKRNRKRMATVAAVYSIERTVRGAESIMGIKAEQDPSPKPRA
                     RNKRVWASVQRAPPAVTEELFVEALRRDPERRRPWVMLVDGHEGQLEHIHASIEHHRV
                     EVTLILDFIHVLEYLWKAAWSFFTPGSEEAEQWVGDRALQILKGKASDVAAGMRRAAT
                     LRQLSAPERKPVDTCADYLLKYRDMLHYDDYLAQGLPIATGVIEGACRHLVKDRMDIT
                     GARWRLNSAEAVLKLRSRHSSGDGDAYWDFHKAQELRRNHSSRIENRPLQKAA"
BASE COUNT          509 a          818 c          697 g          590 t
ORIGIN      
        1 gttctgggct cggtcaaccg gtcctttccg ggtacacgtt gtggataaag tgattcttgt
       61 ccgccaatga tgtggtggcc tcagctaagc ctcacgcccg ctggccgacg acccaaatac
      121 ataacgtcct ttatgttata gaaaccgccc caaacccgaa accgcgtagg gcgtccgata
      181 acgcaatggc gagaacaggt tgtggcaccc ttgctttctt gccggccagc agcagccagc
      241 agattaatat tggtgggcta ctaccgtata tcatgccttc agaagaaggt cccgctgttt
      301 gtgccaatcg atgatcgctt cctccgggta ttccttgaag tgaacgtcgc gcttcccctt
      361 tggcaccgca atccatggcg ccatgtagtt cagcatgatg tgctgacgct caggcgactt
      421 gggaagtggg gtgtcgatgg ctgaagcgaa cggatagacc cactccggcc agcgggaatc
      481 gaatatccac agagcgctgc cacaggcttt gcagaaatgt cgccgcgcct ggctttgcac
      541 tttcttcccc ggatggtcct cgtcatccac cagagcacgg tagactgaaa tgcttttcct
      601 gcccttcact ttgagggtgt tagcctgccc catgatgttg atggtgtagc cccctccgcc
      661 agccgtcttg cggcagatgg agcagtagca gcgcatatag ggatatggcg tgtaggattc
      721 caccgaaaac ttcaccgccc cacagtgaca ggatccttcg agcaacatag cagtagggtg
      781 cggctctttt agaacgacgc tcaagcatat tatgcggcct tctggagagg gcggttctcg
      841 atacgagagg agtggttgcg cctgagttct tgggctttgt ggaagtccca ataggcatca
      901 ccatcgccgc tggaatgccg tgaacggagc ttcaataccg cctcggcact gttcaagcgc
      961 cagcgtgcac ccgtgatatc catccggtct ttaaccaggt gacggcaggc cccttcgatg
     1021 acaccggtag cgatggggag cccttgggcc agatagtcat catagtgcaa catgtctcgg
     1081 tacttgagca gataatccgc gcaggtatcg actggcttgc gctcaggggc ggagagttgg
     1141 cgtaaggtcg cggctctgcg catgccggcg gccacatcgc tcgccttccc tttgaggatc
     1201 tgcaacgccc gatctccaac ccactgctcg gcctcttcgc tacctggggt aaagaagctc
     1261 caggcggcct tccacaggta ttcgagcacg tggatgaagt cgaggataag cgtaacctcg
     1321 acccggtggt gttcgatgct ggcatggata tgctcaagtt gcccctcatg tccatcgacc
     1381 aacatcaccc agggccgccg ccgctcgggg tcgcgtcgca acgcctccac gaagagctct
     1441 tcggtcaccg ctggtggcgc gcgctgcaca ctggcccaga cccgcttgtt gcgtgcccgt
     1501 ggcttggggc tcggatcctg ctccgctttt atgcccataa tcgactcggc accgcgcaca
     1561 gttcgctcaa tgctgtagac ggctgctacc gtcgccatgc gcttacggtt gcgtttctcg
     1621 ccctggctca agcgcgtctt gagcttgtgc tgctcccgct ccgccgccct ccgcgtcgcc
     1681 tcccgaaggt cctcccggcg catcacgatc cccttaccat caaggctcat caccaaaggg
     1741 tccagcgtcg gctccggctc atcgctcccc cggctggcat agaaggcctc gaagtcttgg
     1801 ctgacctgcg ccgccagcgc ctcggcctga cgcttgggca ccttgccccc cgtcgtgcgc
     1861 tcaagaccca gcaccgctgc gtcaaacgaa ctgccggcca cctcttcggc taaccgccgc
     1921 cgtagaccat gcgagtagct atcccgcggc aggttgcgct cgccatccag gggaaaaata
     1981 ctctcttccc ctcgggcacc gtagccccgc cgccgcactg tcacttcgcc aaacagcgtc
     2041 atcaagccgc gttgacacgc ttccctgaca tgacggcgga gcactccatc ggagcctttt
     2101 acctcctcgc gtttcgtctc cttcaccgta cgccgatcca gatgcccttg cagcaaccgt
     2161 cgcagtaact ccgtgccctc atgcgtaatc agctcttcca cttcgccatg ttccatccgc
     2221 aatacctgct tcgattggag ctgatcgacc agagagccaa actgctcgcg ggctgcggtg
     2281 aactcttcca gaccttggat aagggtgtat gctggctgca tgagaggggc tcctttttgg
     2341 gacgtagggt tgtcattaac tcatacatac caccgactac cctctctttc tatacttttt
     2401 ctctttaacc tattgattca ccgtcgttct aaaagagccg cacccaaact aatgatagca
     2461 acttgagagt tttcaatgag ttgcggctct gaaggggtga gacagccgcc taagttgtgg
     2521 gcacacgcat aggagtattt tgtattgact tatttggtgg tacatgcgag attaataggc
     2581 atctatctcc gaaccaccaa gcgcaaaaac cgag
//
LOCUS       DASQSL010001497         1079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_170680, whole genome shotgun sequence.
ACCESSION   DASQSL010001497 DASQSL010000000
VERSION     DASQSL010001497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170680"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..186)
                     /locus_tag="VE844_15305"
     CDS             complement(<1..186)
                     /locus_tag="VE844_15305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02666.1"
                     /translation="MAIFRAGWFDFQAIRDVPMLEFSLERREINLPPFWAFAHFCHLA
                     LVGEVFWNSVVKLDRIGI"
     gene            complement(235..738)
                     /locus_tag="VE844_15310"
     CDS             complement(235..738)
                     /locus_tag="VE844_15310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016861523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02667.1"
                     /translation="MALFPPGQGGGEGVARGGTGKGVRIHSLTDGGGMPLANRTPPAH
                     GDERAQVLPLLDAVKVRTGKRGRPRKRLEVLATDKGYDAKALRQKLRQRGIRAQIPKR
                     VWKSKKHRGRPIKKGVPRFQAERTFAWFQKKYRRLVVRWERTVACFEAFLAIATIHIW
                     LQRLIVG"
     gene            complement(821..1054)
                     /locus_tag="VE844_15315"
                     /pseudo
     CDS             complement(821..1054)
                     /locus_tag="VE844_15315"
                     /inference="COORDINATES: protein motif:HMM:NF024736.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          235 a          353 c          286 g          205 t
ORIGIN      
        1 tattccaata cgatcgagtt ttacgacgct attccaaaat acttcaccaa caagcgccag
       61 atggcaaaaa tgcgcgaagg cccagaaggg cgggaggttt atctccctac gttcgagcga
      121 gaattcaagc atcgggacat cacgtatagc ctgaaaatca aaccagcccg cgcggaagat
      181 cgccacggga gggagctgga atattatccg agcgaacagg aggaaatcat gaatctatcc
      241 cactatcagc ctctggagcc agatgtgaat cgtagcgatg gcaaggaacg cctcaaagca
      301 tgccactgtg cgctcccaac gcaccaccaa gcggcgatac ttcttctgga accaggcaaa
      361 cgtgcgctcc gcttggaacc gtggtacccc tttcttgatc ggtctgccgc ggtgtttctt
      421 gctcttccag acccgcttcg gaatctgcgc ccgaatccca cgctgccgta gcttctgccg
      481 cagcgctttg gcatcatagc ctttatccgt ggcgaggacc tcaaggcgtt tgcgaggacg
      541 cccccgtttg cccgtgcgca ctttgactgc atcaagcaac ggcaggactt gcgcccgctc
      601 gtccccatgg gcaggcgggg tgcggttcgc caagggcata ccgcccccgt ccgtgaggct
      661 gtggatccgc acccctttgc ccgtgccgcc gcgagcgacg ccctcgccgc ccccctggcc
      721 cgggggaaaa agagccatcg atggcgccat aggcccactg catcatgccc cgctcctcag
      781 ccagacctag gatgcgggct ggcatcgttg ccaacctccc gtcgctctgc cagcgcttca
      841 accagcgatg cgtggcactc ttcgatgccc attgcggccc acgggggaca tcacaccacc
      901 gacagccggt aatcaagata tagagcaacg tattgaggac cttgcgaaac ggcgcatggg
      961 tcatcccgcg gccacgcttt tggggtgcgg ggggaaagac atcctcgaac aaacgccact
     1021 ctaaatcact cacgccttca aatctacctg ccatacgacc ctcctatatc tatgtcgag
//
LOCUS       DASQSL010001498         1826 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_13248, whole genome shotgun sequence.
ACCESSION   DASQSL010001498 DASQSL010000000
VERSION     DASQSL010001498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1826
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13248"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1674
                     /gene="alaS"
                     /locus_tag="VE844_15320"
     CDS             <1..1674
                     /gene="alaS"
                     /locus_tag="VE844_15320"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018954470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HZC02668.1"
                     /translation="PFFYRLVEALGQAMGSAYPQFLDVKSTVAGVLRQEEERFAETLE
                     QGLRLLDRTLAELSGTVIPGKDIFQLYDTYGFPVELTADIARERGLTLDMEGFEREMT
                     AQRERARASQPSTREYIPVLQPSLLPPGSFEFTGYEGVTAEGHVTGLFIDGEPTELIK
                     AGEQGIVVLDRSPFYAEAGGQIGDTGDLRGPEGVFHVRDTQKQGDVHVHLGVLKVGQL
                     KRGDRIQAQVDAALRQATALNHSATHLLHAALRKILGQHVQQKGSLVAPDRLRFDFSH
                     TGSLTAEQWWEVERLVNREIRANREVEIRIMPVQKALESGAMALFGEKYEDEVRVLTI
                     GDLSVELCGGTHVRRTGDIGLFKIIAETGIAAGIRRIEALTGEAALAWVEETEQRLGQ
                     VAELVKGTRDTVAEKTEQLLHQLRQQEKLNQALKAKLSSRQGTAPLTAQVVDVAGVKV
                     LATVLEEADAATLRMTADQLKSSLGTAAFVLASVDNSTIRLVAGVSKDITRTIRAGDL
                     VNFVARQVGGKGGGRPDLAQGGGNDPSKLSAALQSVPGWVREQIEPSKV"
     gene            1694..>1826
                     /locus_tag="VE844_15325"
     CDS             1694..>1826
                     /locus_tag="VE844_15325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014995429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HZC02669.1"
                     /translation="MALIVQKFGGTSVGSIERIRAIATRVAATHKQGQQLVVVVSAMS
                     "
BASE COUNT          392 a          471 c          610 g          353 t
ORIGIN      
        1 ccgttttttt accggctggt ggaggcgctc gggcaggcaa tggggagcgc ctatccccag
       61 ttcctggatg tcaaaagcac cgtcgcaggg gtgctgaggc aggaggaaga acgctttgcc
      121 gagacgctcg agcagggact caggctactc gatcgaaccc tcgctgagct cagcggcacg
      181 gtgatcccgg gtaaagacat ctttcaactc tatgatacct atggtttccc cgtcgaactg
      241 accgcggaca tcgcccggga gcggggactg acgctggata tggagggttt cgagcgggag
      301 atgacggccc agcgtgagcg tgctcgggct agccaaccca gtacgaggga gtacataccg
      361 gttttgcagc cctcgctgct ccccccaggc agttttgaat tcaccggcta tgagggggtg
      421 acggcggagg gccacgtgac cggcttattc atcgatggtg aacctactga gcttataaaa
      481 gcaggtgagc aggggatcgt ggtgctcgac cgtagcccct tctatgcaga ggccggcgga
      541 cagatcgggg ataccggtga tctgcggggt ccggagggcg tatttcatgt ccgtgacaca
      601 caaaagcagg gcgatgtgca tgttcatctt ggcgtcttga aggtcgggca acttaaacgc
      661 ggcgaccgga tccaagccca ggtcgatgcc gctcttcggc aagctacggc gctcaatcat
      721 tcggcgactc atctgctgca tgcggcctta cgcaagatcc tcggccaaca cgtgcagcaa
      781 aagggttcac tcgtagcccc cgatcgtctg cgtttcgatt tttcccatac cggatcgctg
      841 accgcagagc agtggtggga ggtggagcgt ctcgtgaacc gcgagatccg cgccaatcgt
      901 gaggtagaaa tacggattat gccggtgcag aaggcgctgg aaagcggggc tatggccctg
      961 tttggcgaga aatacgaaga tgaggtgcgg gtactgacca tcggggatct ctccgttgag
     1021 ctctgcggcg gcacgcatgt gcggcgcaca ggtgatatcg gtctctttaa gatcattgcg
     1081 gagacgggga tcgcagcggg tatacgccgg atcgaggcat tgacgggcga ggcggcgctt
     1141 gcctgggtcg aggagacaga gcagcgcctt gggcaggtcg ccgagttggt caagggcacc
     1201 cgtgatacgg tggccgaaaa gacagagcaa ttactgcacc agctgaggca gcaggaaaaa
     1261 ctgaatcagg cgctcaaggc caagctttca agccggcagg gcaccgcgcc tctcactgcc
     1321 caggtggttg atgtcgccgg tgtcaaggtc ttagctacgg tgctcgagga ggctgatgcg
     1381 gcgactttac gaatgacagc ggatcagcta aaaagcagct tgggcacggc ggccttcgtg
     1441 ctggcgagtg tagataacag cacgatccgg ttggtggcgg gtgtgagcaa ggatatcacg
     1501 cgaacgatcc gggcgggcga tctggtcaat tttgtcgccc gccaggtagg cggcaagggg
     1561 ggagggcggc cggatctggc tcaaggggga ggaaacgacc cttccaaact cagtgcagcc
     1621 ttacagagtg ttccaggatg ggttcgcgag cagatcgaac cgagcaaggt ttaatttata
     1681 ataatataac gctatggcat tgattgtaca gaagtttggc ggtacatctg tcggcagcat
     1741 tgaacgcatc agagcgatag ccacccgagt agccgctacg cataagcaag gccagcaact
     1801 ggtggtggtg gtctccgcca tgagcg
//
LOCUS       DASQSL010001499         2254 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_147781, whole genome shotgun sequence.
ACCESSION   DASQSL010001499 DASQSL010000000
VERSION     DASQSL010001499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2254
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147781"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            253..1896
                     /locus_tag="VE844_15330"
     CDS             253..1896
                     /locus_tag="VE844_15330"
                     /inference="COORDINATES: protein motif:HMM:NF019339.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZC02670.1"
                     /translation="MRAVAVFCVVALCVAPAIAQHQHGSGATKALELHPGLGNYHHPI
                     TTKNPEAQTYFNQGLTLLYSFNHDEAARYFRRAAELDPAAAMPYWGLALSIGPNYNDT
                     TVDENRAKATYGAVQRAVERASKASAREQDYIRALAKRYPSSNAKSDWKQFHLDYSNA
                     MREVVKKYPDDLDATTMFAESLMMLRPWQLWTLDGKPAPGTLKLVAVLESVLKRSPDH
                     PGANHFYIHAVEASPNLERAIPSALRLMTLIPGAGHLLHMPGHIFLQTGDYELAAKTN
                     VNAAAADKAFVQRTGATGIYPLMYWTHNIHFISYARAQQGRYDEAKQAAQEMAQNVGD
                     ADLQMQMLEGFHLYPLMIDLRFHRWDDILQTPAPRPERKLHRTFWQYVRAMALAGQGK
                     LNEAAAERKQFESLRKVIPTESQFLLNNKSADILALAAATLDAQLASARGENEKSIQK
                     WRRAVKLESRIQYDEPPAWFYPVRQSLAVALLRNGRAKEAEAVFRGAIQKGPRDGRLL
                     FGLWQSLMAQKRDNEAALVEQQFNAAWKDSTVKLRIEDL"
     gene            complement(2065..>2254)
                     /locus_tag="VE844_15335"
     CDS             complement(2065..>2254)
                     /locus_tag="VE844_15335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02671.1"
                     /translation="ILCLYFCGPPWLRNFYPRLKDIPRAVPPSLMKIVLTGSPSSSMG
                     RSSPWDRDPPLRYCHYKG"
BASE COUNT          523 a          649 c          656 g          426 t
ORIGIN      
        1 acgcaagccc taatatctag agtttggtaa actgtggaca gaagagtgtg cctaatggcg
       61 taccgatgct agaggcatcc gtattatttg gggttattaa gcagacaccg acggttaaac
      121 taattactat aggcgtccgt acgaataaag aatgtccgga cggattcgta cggttaatta
      181 ctgttagccc gctccgggac aattacaatt cagatgctat cgcttaatcg ctgcaaagag
      241 aaaggaggag gaatgcgagc agtagcagtc ttttgtgttg tagcgctttg tgttgctccc
      301 gcaatagcac agcaccagca tggaagtgga gcgacaaaag cgcttgaact tcaccccggg
      361 ctgggcaact accatcatcc catcacaacg aagaacccgg aagctcaaac atacttcaac
      421 cagggattga cgcttctcta cagcttcaac cacgacgaag ccgcccgcta cttccgccgc
      481 gccgcggagc tcgaccctgc agcggcaatg ccatactggg gcctcgcgct ttccattggg
      541 ccgaactaca acgatacaac ggtggatgag aaccgcgcga aagccaccta cggcgccgtg
      601 cagagggcgg ttgagcgtgc gtcgaaggcg agtgcccgcg agcaggacta catccgagcc
      661 ctggcgaagc gctacccgtc gtcgaacgcg aaatcagact ggaagcagtt ccatctcgac
      721 tacagcaacg ccatgcgtga ggtagtgaaa aagtacccgg acgacctcga tgcaaccaca
      781 atgttcgccg agagcctgat gatgctgagg ccgtggcagc tctggaccct cgatggtaag
      841 ccggcgcccg gcacgctgaa gcttgttgcc gtgcttgagt ccgtgttgaa gcgcagcccg
      901 gatcatccgg gtgcgaatca cttttacatc cacgccgtgg aagcttcgcc caacctcgaa
      961 cgcgccatcc cgagcgcgtt gcgcctcatg acgctcattc ccggcgcggg ccacttgctt
     1021 cacatgcccg gacacatctt cctccagacc ggtgactacg agctggccgc aaaaacgaac
     1081 gtgaatgccg cggcagcgga caaggcgttc gtccagcgca ccggcgcaac cggcatttac
     1141 ccgctgatgt actggacgca caatattcac ttcatctcct acgcgcgggc gcagcagggc
     1201 cgatacgatg aggcaaagca ggcggcgcag gaaatggccc agaacgtcgg cgacgcggat
     1261 ttacagatgc agatgcttga aggatttcat ctctatccgc tgatgatcga cctccgcttc
     1321 catcgctggg acgacattct ccagacgccg gctcctaggc ccgaacggaa gctccaccgc
     1381 accttctggc agtacgtgcg ggcaatggcg ctggccgggc agggtaagct gaacgaggcg
     1441 gcggcggaac ggaagcagtt tgagtcgctg cgcaaagtca tcccgaccga atcgcagttc
     1501 ctgctcaaca ataaatcagc ggacattttg gcccttgccg cagccacgct cgacgcgcag
     1561 ctcgcgtcgg cgcgcgggga aaatgaaaag tctatccaaa agtggcgccg cgcggtcaaa
     1621 ctcgagtcca gaatccagta cgacgagccg cccgcgtggt tctacccagt acggcagtcg
     1681 ctggccgtcg cgctgctgcg taacggacgg gctaaagagg cggaagctgt cttccgcggg
     1741 gcgattcaga agggcccgcg cgacggtcgg ctgctcttcg gcctgtggca gagcttgatg
     1801 gcgcagaaac gcgataacga agcggcgctg gttgaacagc agttcaacgc cgcatggaaa
     1861 gattccacgg tcaagctgcg cattgaagac ctgtaagctc tggaccacgg atttacgtcc
     1921 gtggctttgg ggcaacctct tcgggaagtt cagaacattc ctcctgtact caggtacggg
     1981 gcgttctgtg ttttactacg cagtgcaacc gatgccgggc acgatagtgc ttaaacgggt
     2041 tgtcacataa ttcatggagg cgggttatcc tttgtagtgg caataacgca gcggcggatc
     2101 ccgatcccac ggtgacgatc ttcccatcga gctggagggc gaccccgtaa gcacgatctt
     2161 catgagcgaa ggcggcacgg cgcgtggtat gtctttcagt cgtggataga agttacgcaa
     2221 ccatggaggc ccgcaaaaat aaaggcatag aatc
//
LOCUS       DASQSL010001500         1056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_116224, whole genome shotgun sequence.
ACCESSION   DASQSL010001500 DASQSL010000000
VERSION     DASQSL010001500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116224"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            422..751
                     /locus_tag="VE844_15340"
     CDS             422..751
                     /locus_tag="VE844_15340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018548353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC02672.1"
                     /translation="MAVSDDRNLDAMFRALADSTRREILDELAKRDDQPLFEICVRLV
                     EGHGMNLTRQAISKHLTVLENADLVDVRWEGRTKLHSSKLSAHLPRLIEWLNKHKRKG
                     EVECELS"
     gene            736..>1056
                     /locus_tag="VE844_15345"
     CDS             736..>1056
                     /locus_tag="VE844_15345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017537437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZC02673.1"
                     /translation="MRIVVTSVFVEDQEKALSFYTEVLGFQKKTDIPLGEDRWLTVVS
                     PEEPDGVELLLEPSGHPAVKPFKQALVEDGIPFTSFGVEDVKAEHARLEGFGVKFTQP
                     PTTFG"
BASE COUNT          251 a          296 c          302 g          207 t
ORIGIN      
        1 acaagccgtt cccgcacctc aacgacaccg acaccttccg caagatgatc cgcaggcgcc
       61 tcaccatcgc tgttgcagtg ccggttgttg cagtgtcgct ggctgggctg gtactgctcc
      121 gtctgcgcaa gcgtcatcgt cggtgatccc tcaggcgcaa gctctaagcg tcaaatttaa
      181 ctaaactcgt cagcaatagc tgacgaaacc ttcggcaagg gcaacaacga gcgcatcacc
      241 tacgccgacg gcgcccttca ggctccacgg caaaccaaac tgctgcttgc aagcgccacg
      301 aaacttctgc accctagact tcaggggttt tgggaccgca aactaactgg aggggtagac
      361 ccggggtcgc ggtggaagca gacttgacat gcaaccatgt ggttgcataa tatgaaggaa
      421 catggcagtc agcgacgaca ggaacctcga tgcgatgttt cgcgctttgg ctgattcgac
      481 cagaagggaa attctggacg agttggccaa acgagacgac caaccgttgt tcgagatttg
      541 cgttcgcctt gtggaaggcc acggcatgaa cctcacaagg caggcgatct ccaagcacct
      601 gacggtgctg gaaaacgccg atctcgtgga cgttcgttgg gagggccgca cgaagttgca
      661 ttccagcaaa ctgtcggcac acctgcctcg gctcatcgag tggttgaaca agcacaagcg
      721 gaaaggagaa gtcgaatgcg aattgtcgtg accagcgtgt tcgtcgaaga tcaagagaag
      781 gctttgagct tctacaccga ggtcttgggg ttccagaaaa agacggacat accgttaggc
      841 gaagatcgct ggctgacggt tgtttcaccg gaggagccgg atggagttga actgttactg
      901 gaaccgagcg gccaccctgc cgtcaaaccg ttcaagcagg cacttgtcga ggacggcatt
      961 ccgttcacga gtttcggcgt tgaagatgtc aaggccgaac acgcccgcct cgaaggcttt
     1021 ggcgtcaaat tcacccagcc tcctaccacg ttcggc
//
LOCUS       DASQSL010001501         1448 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_13308, whole genome shotgun sequence.
ACCESSION   DASQSL010001501 DASQSL010000000
VERSION     DASQSL010001501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1448
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13308"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..230
                     /locus_tag="VE844_15350"
     CDS             <1..230
                     /locus_tag="VE844_15350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014705014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutaredoxin domain-containing protein"
                     /protein_id="HZC02674.1"
                     /translation="ATEALQACNAEFSYIDVLADPEVRQSLPRYSHWPTFPQLFIKGE
                     LIGGCDIMLELLQKGELQKLTAAAGPVPTIA"
     gene            complement(274..1005)
                     /gene="dnaQ"
                     /locus_tag="VE844_15355"
     CDS             complement(274..1005)
                     /gene="dnaQ"
                     /locus_tag="VE844_15355"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013219355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HZC02675.1"
                     /translation="MRQVVLDIETTGLEPEKGHRIIEIGCVEIVDRRITDRRYHRYLW
                     PDREIEQGALAVHGITLEFLERSPRFGDIVEEFLEFIRSAELIIHNAPFDVAFIDHEM
                     KRLGPPWGTLGDDHAVLDTLVLARGLHPGQKNSLDALCKRYRIDNTHRDLHGALLDAE
                     LLAALYLAMTGGQQAELLLGGNDTLAQVTYAKKRLNAQSPERPPLRIILPSEQELSAH
                     LHCMAAIDKASQGRCVWKLLEQVPV"
     gene            complement(987..>1448)
                     /gene="rnhA"
                     /locus_tag="VE844_15360"
     CDS             complement(987..>1448)
                     /gene="rnhA"
                     /locus_tag="VE844_15360"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006788622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HZC02676.1"
                     /translation="LFTDGACRRNPGPGGWGVFMRYREHEKTLCGGEAYTTNNRMELM
                     AAIYGLEALKRPCSVRLTTDSRYLKEGITRWLPAWQRRGWRTAANQPVKNADLWQRLV
                     AVASRHRIEWRWVKGHAGHPENERADELANQGIEYLLSGHPSGERLCVRSS"
BASE COUNT          317 a          438 c          391 g          302 t
ORIGIN      
        1 gcgcaaccga agccttacag gcatgtaatg cagaattctc ctacatcgat gtgctcgccg
       61 atcccgaggt ccgccaaagt ctaccgcgtt actcccactg gccaaccttt ccccagcttt
      121 ttatcaaggg cgaattgatc ggcggctgtg acatcatgct agaactcttg caaaagggcg
      181 aactgcaaaa gctaacggcg gcagcgggtc cggtcccaac gatagcctaa aatcttcggc
      241 gaaggggacc cccactcgcc tgtagccacc tgattaaacg gggacctgct cgagcagttt
      301 ccatacgcag cgtccctggc tggctttatc tatcgcggcc atacagtgga ggtgtgcaga
      361 aagttcctgc tcactaggga gaataatgcg caaagggggg cgctcggggg attgagcgtt
      421 caagcgcttt ttagcgtagg ttacctgagc gagggtgtca ttgccgccga gcaaaagttc
      481 agcctgctga ccgcctgtca ttgcaagata gagggcggcg agcagctcgg cgtccaataa
      541 agccccatgc agatcgcggt gagtattgtc gatccggtag cgtttgcaga gcgcatccaa
      601 gctatttttc tgacccggat gaagcccgcg ggctagtacc agggtatcta gcaccgcatg
      661 atcatcccca agcgttcccc acggtgggcc caagcgcttc atttcgtgat cgataaaggc
      721 tacatcgaaa ggggcattat ggataatcaa ctcggcactg cggatgaatt ccaggaattc
      781 ctcgacaata tccccaaagc gtgggctacg ctctaaaaac tccaaggtga tcccatggac
      841 ggccagggcc ccttgctcga tctcgcgatc gggccagaga tagcgatggt agcgccgatc
      901 cgtgatgcgc cggtcgacga tctcgacaca gccgatctca atgatccgat gccctttctc
      961 aggctcaaga cctgtcgttt cgatatctaa gacgacctga cgcatagacg ctctccggat
     1021 ggatggccag acaacaggta ttctatcccc tgattggcga gctcatcggc ccgctcattt
     1081 tcgggatgcc ccgcatgccc cttgacccaa cgccattcta ttcgatgccg agaggccaca
     1141 gccaccagcc gctgccacag atcggcattc ttgaccggct ggttagcggc agttcgccag
     1201 cctcggcgct gccaggctgg aagccaccgc gtgatcccct ctttaagata acgggaatcg
     1261 gtagtcagcc ggacgctgca gggccgcttg agcgcctcga gcccgtaaat tgccgccatt
     1321 aattccatgc ggttattggt cgtataggcc tccccaccgc acaaggtctt ttcatgttcc
     1381 cgataccgca tgaacacacc ccacccgcct gggcccgggt ttctacggca ggccccatcg
     1441 gtgaaaag
//
LOCUS       DASQSL010001502         1969 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_190061, whole genome shotgun sequence.
ACCESSION   DASQSL010001502 DASQSL010000000
VERSION     DASQSL010001502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1969)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1969
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190061"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            369..1043
                     /locus_tag="VE844_15365"
     CDS             369..1043
                     /locus_tag="VE844_15365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009459703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HZC02677.1"
                     /translation="MSEMPSLDEAVEFAENPEPRCPCVLLLDTSSSMQGAPIDALNQG
                     LRTFKDELMKDPLASRRVEVAVVTFDSEVRVIQDFVTADQFQPPTLTAQGLTYMGHGI
                     HKALDMIQARKARYRVNGITYYRPWVFLLTDGAPQGEPEEVVARAAQRLKDDEAHKRV
                     AFFAVGVEGADMIRLSQIAVRTPVKLLGLNFVAMFVWLSRSTQAVAHAAVDGEVALPP
                     PGWGAV"
     gene            1085..1864
                     /locus_tag="VE844_15370"
     CDS             1085..1864
                     /locus_tag="VE844_15370"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017316842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family serine/threonine-protein
                     phosphatase"
                     /protein_id="HZC02678.1"
                     /translation="MPIHRGRCPWRVIAASVGGTHHEQKGQPCQDTHCWHVLPESVLV
                     AAIADGAGSAPLGGVGAAIAARTGVEAIGTRIAQQWRPASDEYWKLLLKDALKAARMA
                     IEVEATAREVAMRDLATTLILVAATPEVVSAAQVGDGAVVVGNSEESIIALTSPESGD
                     YINETTFLSASMALDTAQVIVWHGGVAHVAVLSDGLQMLALKMPGGVPHGPFFSPLFR
                     FAASATDKERAQEQLMTFLRSPRVRQQVDDDLTLLLATLVK"
BASE COUNT          414 a          548 c          595 g          412 t
ORIGIN      
        1 tttaacaatt tagtgacggc gcccgcggag gtcgatcatg tcgatattta ttataacaac
       61 gggcatccgg gcgtacccga ccctcactac cacgtggtct tctggcacat ccctcccgag
      121 caggccgcgt tgctggagtg agccacggcg cgggctgctc accgcaggca aagggggctc
      181 cgggtgcgct ggcctccgct ctccgggtaa cagggccggg gcccctactg gtgataacca
      241 ttaactcgag cataacaatt ttgagtgcaa gatttgcaga tccgctcctt tagtaggtat
      301 gtgttaactc tggaacctga aagtggcctc gttcggatca gtaggtgaaa cccactaagg
      361 aggaagccgt gtcagagatg cccagccttg acgaggccgt ggaatttgct gagaacccag
      421 agccgcgctg cccgtgcgtt ctcttgctgg acacctccag ctcgatgcag ggtgcgccta
      481 ttgacgcgct caaccaaggg ttgcgaacat ttaaggatga gttgatgaaa gatccactcg
      541 cctcgcgtcg ggttgaggtc gcggtggtca cgtttgatag tgaggtcaga gtcattcagg
      601 attttgtgac cgctgaccag ttccagcccc caacactgac cgcacaagga ctcacctata
      661 tgggccatgg gattcataag gccttggaca tgatccaagc ccgtaaggcg cgatatcgag
      721 tcaacgggat tacctattat cgcccatggg tctttctgct caccgacggc gcaccgcaag
      781 gagagccaga ggaggttgtt gcacgggcag cgcaacgtct caaagatgac gaagcccaca
      841 agcgagtggc cttcttcgca gtgggcgtgg agggtgctga catgatacgc ctgagtcaaa
      901 tcgccgtgcg tacccctgtc aaactcctcg gcttgaactt tgttgcgatg ttcgtatggc
      961 tctcccgcag tacgcaggcc gttgctcacg cagcggtcga tggtgaggtg gccttgccgc
     1021 caccagggtg gggggccgtc taatgcgctt gtgcgatgca cgcaataaaa gaaccaatca
     1081 atacatgcca attcaccgag ggcgatgccc ctggcgcgta atcgctgcgt cggtgggcgg
     1141 tacacatcac gagcagaagg ggcaaccgtg ccaggatacc cattgctggc acgtgttgcc
     1201 agaaagcgtc ctagtcgcgg cgattgctga cggcgcaggc tcggccccgt tgggaggagt
     1261 aggggctgcc attgccgcaa ggacgggggt ggaggcgata gggacacgca tagctcaaca
     1321 atggcggcct gcgagtgacg agtactggaa gttactgcta aaggatgccc tgaaagccgc
     1381 acggatggct atcgaagttg aagcaaccgc gcgtgaggtc gccatgcggg atttggccac
     1441 aaccttgatt ttagtggctg ccacacctga agtcgtttcc gccgcacagg taggcgacgg
     1501 cgcggtcgtg gtgggtaaca gtgaagaaag catcatcgcg ctcacttcac cggagagtgg
     1561 tgactacatc aatgaaacca ccttcctcag cgcatctatg gccttggata cagcccaagt
     1621 gatcgtgtgg cacggagggg tcgcgcatgt tgccgtcctc tctgatgggc ttcaaatgct
     1681 tgccctcaag atgcccggtg gtgttccgca tgggccgttt ttctctccgt tgttccgctt
     1741 tgcggcgagc gcaaccgata aagaacgggc acaagagcaa ttgatgacgt tccttcgctc
     1801 cccgcgcgtt aggcaacagg tcgatgatga cctgacgctg ctcctggcaa cccttgtgaa
     1861 atgagttagc cgtgcggctg cagcgtcaat ccaatggaca ccttatcacc atcgatcccg
     1921 ccctagcact cggcactggg ggtgaggcgc gtgtctatgc gatcccaca
//
LOCUS       DASQSL010001503         1726 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_65568, whole genome shotgun sequence.
ACCESSION   DASQSL010001503 DASQSL010000000
VERSION     DASQSL010001503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1726
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65568"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..156
                     /gene="gatC"
                     /locus_tag="VE844_15375"
     CDS             <1..156
                     /gene="gatC"
                     /locus_tag="VE844_15375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003242853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HZC02679.1"
                     /translation="DTTDIEPLAHPLELTTRLREDRIIEQNQRERFQRIAPRVEAGLY
                     LVPKVIE"
     gene            158..1612
                     /gene="gatA"
                     /locus_tag="VE844_15380"
     CDS             158..1612
                     /gene="gatA"
                     /locus_tag="VE844_15380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013219554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HZC02680.1"
                     /translation="MHHKTLAELSAALHTREISSEELTQIYLARIERLNKELNSFITV
                     TAERALIQAKAADRRLHAGQDGPLTGIPIAQKDIFCTNGVKTSCGSRMLDPFISPYDA
                     TTVERLNQAGTVMLGKTNMDEFAMGSSNETSFYGPVKNPWDRTRVPGGSSGGSACAVA
                     ARLAVAATGTDTGGSIRQPASLCGVTGIKPTYGRVSRYGMVAFASSLDQGGPMARTAE
                     DAAMLLNVMAGFDTRDSTSVEHPEEDFTAVLDNTLAGLKIGLPKEFFGSGLDPKVAAV
                     IDAAVKEYEKLGAILKDIRLPNTPLSIPAYYVLAPAECSSNLARFDGVRYGYRCQDPV
                     DLPDLYCRSRGEGFGAEVKRRIMIGTYALSAGYYDAYYLKALKVRRLIRDDFRRAFEV
                     VDVIMGPTSPTVAFKLGEKTGDPLTMYLSDIYTISLNLAGLPGMSIPAGFIDGLPVGL
                     QIIGNYFSEARLLNVAHRFQQTTDWHRHEPPGIE"
     gene            1633..>1726
                     /locus_tag="VE844_15385"
     CDS             1633..>1726
                     /locus_tag="VE844_15385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002808624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02681.1"
                     /translation="MEWEPVIGLEIHAQLMSKSKIFSGAPTAYGA"
BASE COUNT          375 a          514 c          492 g          345 t
ORIGIN      
        1 gataccaccg acattgaacc cctcgcgcac ccgcttgagt tgaccactcg cttgcgtgaa
       61 gacaggatca tagagcaaaa ccagcgggag cgattccagc gcatcgctcc ccgggttgag
      121 gccggacttt atctcgttcc caaggtgatt gaataacatg catcacaaga cgctggccga
      181 gctctcggcc gccctgcaca cgcgcgagat ctcaagcgag gaattgacgc agatctatct
      241 cgcccggatt gaacggctca ataaagaact caatagcttt atcacggtga cggcggagcg
      301 ggccttgatc caggcaaaag ccgccgatag gcgcctgcat gcaggccaag acggtccttt
      361 gacggggatc ccgatcgccc aaaaggatat cttctgcacc aacggggtga agacctcctg
      421 cggctcccgg atgctggatc cgtttatctc gccttatgat gcaaccaccg tcgaacgcct
      481 gaatcaagcc gggacggtga tgctcggcaa gaccaacatg gacgagttcg ccatgggctc
      541 atcgaatgag acgagcttct atgggcccgt caaaaacccc tgggaccgaa cccgagtgcc
      601 aggcggatct tccggaggct cggcctgtgc agttgcggcg cggctggctg tggctgcgac
      661 cggtaccgat accggcggct cgatccggca accggcctcg ctgtgcggcg tcaccggtat
      721 caaaccgacc tatgggcgcg tctcccgcta tgggatggtg gccttcgcct cgagcttaga
      781 ccagggagga cccatggccc gcaccgccga agacgcagcg atgctgctca atgtcatggc
      841 cggcttcgat acgcgtgatt cgacctcggt ggagcatcct gaggaggatt tcactgcggt
      901 tctcgacaat acactggcag gcctcaagat cggtctgccc aaggaattct ttggcagcgg
      961 actcgatccc aaggtcgcag cggtgatcga cgctgcggtc aaggaatatg aaaaactcgg
     1021 cgcgatcctg aaagacatcc gtctgccgaa caccccgctg tcgatccccg cctattacgt
     1081 attagccccg gcggaatgtt cgtccaacct ggcccgcttc gatggggtgc gttacggcta
     1141 ccgatgtcaa gacccggtgg atctgcctga tctctactgc cgctcgcggg gcgaagggtt
     1201 tggggcggag gttaagcgcc gcatcatgat cggcacctat gcattatccg ccggctatta
     1261 tgatgcctac tatttgaagg ctctcaaggt ccgccgtctg atccgcgatg actttcgccg
     1321 cgcctttgaa gtagtcgatg tgatcatggg cccgacctca cctacggtgg ccttcaaact
     1381 gggtgaaaag accggtgatc ccctcaccat gtatttgtcg gatatctaca ccatctcttt
     1441 aaatctggcc ggactgccgg gcatgtccat acccgcaggc ttcatcgatg gcttgccggt
     1501 ggggctgcag atcatcggca actatttcag tgaagcgaga ttattaaacg tagctcaccg
     1561 ttttcagcag acgaccgatt ggcaccgcca tgaacccccg gggatcgaat gaagtaataa
     1621 ggagaggaaa agatggaatg ggaacccgtg atcgggcttg agatccacgc ccaactcatg
     1681 agcaaaagca agatcttctc aggcgcccca accgcctatg gagcgc
//
LOCUS       DASQSL010001504         1475 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_160873, whole genome shotgun sequence.
ACCESSION   DASQSL010001504 DASQSL010000000
VERSION     DASQSL010001504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1475)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1475)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1475
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160873"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1475
                     /locus_tag="VE844_15390"
     rRNA            <1..>1475
                     /locus_tag="VE844_15390"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          385 a          352 c          472 g          266 t
ORIGIN      
        1 gacccccgta tgcgaaacgt ctgcgactcc gtggcatggc acctgagtac catggggcac
       61 gagcaacccc gtgggaatct gggaggacca tcttccaagg ctaagtacta ctcgacgacc
      121 gatagtgaac aagtaccgtg agggaaaggt gaaaagcacc ccgacgaggg gagtgaaata
      181 gatcctgaaa ccggatgcct acaaacagtt ggagcccaag gttcgtcctg ggtgacagcg
      241 taccttttgt ataatgggtc agcgacttag tctgtcgagc aagcttaagc cggtaggtgt
      301 aggcgtagcg aaagcgagtc tgaatagggc gattgagttc gacggattag acccgaaacc
      361 gagtgatcta gccatggcca ggctgaaggt gcggtaacac gcactgaagg gccgaaccca
      421 cgcctgttga aaaagtcggg gatgagctgt ggctaggggt gaaaggccaa tcaagccggg
      481 aaatagctgg ttctccgcga aatctattta ggtagagcgt tggacgaatg ctcccggggg
      541 tagagcactg gatgggctag gggtccttac cggattacca aacctaacca aactccgaat
      601 accgggaagc actatccagc agacagacgg cgggtgctaa cgtccgtcgt cgagagggaa
      661 acaaccctga ccgccagcta aggtccccaa gtggtggcta agtgggaaag gatgtgagga
      721 tcccaaaaca accaggatgt tggcttagaa gcagccatca tttaaagaaa gcgtaacagc
      781 tcactggtct aaacaagggt ctttgcgccg acaatgtaac ggggcttaag ccacccaccg
      841 aagctgcggg tgtgcacttg tgcacgcggt agcggagcgt tccgtaggcc tgtgaaggga
      901 tactcgcgag agatcctgga ggtatcggaa gtgcgaatga tgacatgagt agcgacaaag
      961 agtgtgagag acactctcgc cgtaagtcca agggttcctg cgcaatgcta atcagcgcag
     1021 ggttagccgg ctcctaaggc gaggccgaga ggcgtagtcg atgggaacca cgttaatatt
     1081 cgtgggcctg cgaggtgagt gacgaatgcc ggacgttgtc ccttcttatt ggattgaggg
     1141 ggctgccaag gtgttccagg aaatagcccc tcgcacaaag accgtaccct aaaccgacac
     1201 aggtggactg gtagagtata ccaaggcgct tgagagaact atgctgaagg aactcggcaa
     1261 attgctcccg taagttcgcg agaagggagc ccggttcgtg ggcaaccatg ggccgggggc
     1321 acagaccagg gggtggcgac tgtttagcaa aaacacaggg ctctgcgaag ccgcaaggcg
     1381 acgtataggg tctgacgcct gcccggtgcc ggaaggttaa gaggaggggt gcaagctctg
     1441 aatcgaagcc ccggtaaacg gcggccgtaa ctata
//
LOCUS       DASQSL010001505         1249 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_116253, whole genome shotgun sequence.
ACCESSION   DASQSL010001505 DASQSL010000000
VERSION     DASQSL010001505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1249
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116253"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            125..>1249
                     /locus_tag="VE844_15395"
     rRNA            125..>1249
                     /locus_tag="VE844_15395"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          294 a          277 c          431 g          247 t
ORIGIN      
        1 cacggggcgc cgtcgcaccg gacggccaca ggctctgctc aggcgggttc tgggtacacg
       61 gtgagtcgac ggcgtggtcc tgtccgtact ttgagaactg cacagtggac gcgagcatct
      121 ttgtggccaa gttattaagg gcgcacggtg gatgcctagg catcaggagc cgatgaagga
      181 cgtgggaggc cgcgataggc ctgggggagc tgtcaaccga gctgtgatcc cagggtgtcc
      241 gaatggggaa acctggcatc agttatgtgg tgtcacccgc acctgaattc atagggtgtg
      301 tggggggaac gcggggaagt gaaacatctc agtacccgca ggaagagaaa acaattgtga
      361 ttccgtgagt agtggcgagc gaaagcggat gaggctaaac cggcggcgtg tgatacctgt
      421 caggggttgc gttgccgggg ttgtgggacc cgattatcac aactgacatt gtggtgaaga
      481 gtgataaaac cagttgttag ccgaatggtg tggaaaagct gaccgtagac ggtgaaagtc
      541 cggtaggcga aagcacatca tcttcttgga acgagttccc gagtagccgc ggacccctga
      601 aatctgcggt gaatctgcca ggaccacctg gtaagcctaa atacttcctg gtgaccgata
      661 gcggacgagt accgtgaggg aatggtgaaa agtaccccgg gaggggagtg aaatagtacc
      721 tgaaaccgtt cgcctacaat ccgtcagagc ctttcggggt gatggcgtgc cttttgaaga
      781 atgagcctgc gagttagtgg catgtggcga ggttaacccg tgtggggtag ccgtagcgaa
      841 agcgagtctg aatagggcgt tcagtcgcgt gtcctagacc cgaagcggag tgatctagcc
      901 atgggcaggc tgaagcgcgg gtaagaccgc gtggagggcc gaacccacca atgttgaaaa
      961 attgggggat gacctgtggt taggggtgaa aggccaatca aactccgtga tagctggttc
     1021 tccccgaaat gcatttaggt gcagcgttgc gtgtttcttg ccggaggtag agcactggat
     1081 ggtcgagggg ccctacaagg ttactgacat cagccaaact ccgaatgccg gtaagtgaga
     1141 gcgcggcagt gagactgcgg gggataagct tcgtagtcga gagggaaaca gcccagatca
     1201 ccagctaagg cccctaagcg tgtgctaagt ggaaaaggat gtggggtcg
//
LOCUS       DASQSL010001506         1524 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_35303, whole genome shotgun sequence.
ACCESSION   DASQSL010001506 DASQSL010000000
VERSION     DASQSL010001506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35303"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..186)
                     /locus_tag="VE844_15400"
     CDS             complement(<1..186)
                     /locus_tag="VE844_15400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02682.1"
                     /translation="MYKPGYEGWEDPTREQAWNEPQAIRLLQDAGELVAALEATGTRT
                     PHRERYHARLVAAHDARD"
     gene            complement(179..532)
                     /locus_tag="VE844_15405"
     CDS             complement(179..532)
                     /locus_tag="VE844_15405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02683.1"
                     /translation="MTQIIENVEAHYETHEVPFGRTYEWHQAYVILECDCGERLTLTG
                     SVTICRWCGTDHAEMLREEGEVVGHRQLGDKALHPWHHDTQEQTEQHLRDEAAYPECS
                     QWRYNDVTLRNNNDV"
     gene            complement(1122..1331)
                     /locus_tag="VE844_15410"
     CDS             complement(1122..1331)
                     /locus_tag="VE844_15410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02684.1"
                     /translation="MEKERSLEAWIGKEVYVVLGRQRGRRHVKLQDVSEFGIMVQIPD
                     TQRLVFHPWHNIAEIQQASEQQGPL"
BASE COUNT          307 a          441 c          392 g          384 t
ORIGIN      
        1 gtcccgagcg tcgtgcgccg cgaccaggcg ggcatgatac cgctcacggt gtggtgtccg
       61 tgtcccagta gcctccaacg ccgccactag ctcgcctgcg tcctgcaaga gccgaatggc
      121 ttgcggttcg ttccacgctt gctcccgcgt gggatcctcc cagccctcgt agcccggttt
      181 atacatcgtt gttgttacgc aacgtaacgt cgttgtagcg ccactgggag cactcaggat
      241 aagcggcctc gtctcgtagg tgttgttctg tctgctcttg ggtgtcgtgg tgccaggggt
      301 gaagggcttt atcccccaac tgtcggtgtc ccactacctc tccttcttct cggagcatct
      361 ctgcatgatc cgtcccacac caacggcaga tggtcacgga gccggtgagc gtaagcctct
      421 cgccacagtc gcactcaagg atgacatacg cctgatgcca ctcgtaggtc ctgccgaagg
      481 gcacttcgtg ggtttcgtag tgcgcttcga cgttctcgat aatctgggtc attcactggc
      541 cctttcccgc cgcctgacgg gtctgggaag gccagcgaaa ggtagcgtaa tagttgttac
      601 tgttactatc ctagcacaaa tggtcggttt tgtaaagatt tttacaagaa agccccggaa
      661 aatagacgga aaaatagaga gtaggggctg ctgcctcgtt gcctcttgta acaccgcagg
      721 cctgtaggtc accgagaaag agaattcgcg gacactcggt tgccggtttg gaaggtcttc
      781 tcgaaaacta gatgctctcg tctataccta gcaagttcct caccggcgac taataaacca
      841 ccaaaccatc acacaaatga ctgagattac cgtaagcact aagttgacgc tctggggcgc
      901 agagttcgta ataatcataa aagccatcaa catcacatct tacagcttct agactctgga
      961 ctcgaacgat ttgaggttcc ctagcttgcg tggaagacta gtctggccgc cgcagccgcc
     1021 atcgggtatc gggaaatgat tgggtggtcg ctgcctcttg taacgccacg aagcctttag
     1081 gttccgagaa tgctcgttct cataagctat ctaaggcagg cttagagcgg gccttgttgc
     1141 tccgacgcct gttgtatttc tgctatgttg tgccaggggt ggaatactag gcgctgcgtg
     1201 tcagggattt gcaccatgat cccgaattcg ctaacgtctt gtagcttgac gtggcgccgt
     1261 ccccgttgac gccccaagac cacatacact tctttaccga tccacgcttc taaggatctc
     1321 tccttctcca tagcatcacc tctctagcta ttgcctagct gctaccgtgt gcatggtacc
     1381 cgaaccaccg cctagcctcc gactacgatg aaaagtctgg gggccgagtt tctttgcacc
     1441 ttgtcccttc tcggccccct tttaaccggg ctggcacccc tcttacagca ctttgcagtg
     1501 atattgaccc gtgtttgatc tatg
//
LOCUS       DASQSL010001507         1165 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_147838, whole genome shotgun sequence.
ACCESSION   DASQSL010001507 DASQSL010000000
VERSION     DASQSL010001507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1165
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147838"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..680)
                     /locus_tag="VE844_15415"
     CDS             complement(<1..680)
                     /locus_tag="VE844_15415"
                     /inference="COORDINATES: protein motif:HMM:NF016827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-54 factor"
                     /protein_id="HZC02685.1"
                     /translation="MGLETKLSLKQTQKLVMTAMLQQAIKLLPMARLELVQVIRQELM
                     ENPMLEEVALAEDGYTPADEDEAQSLTDTPADSVTDGKELYDINWGEYFPEDWEWKGL
                     PSEEYEERFSYENTVHTPTTLNEHLLAQLMMATTDEQERRVGAFLIGNIDEEGYLRCD
                     LDEAMAATQLDRATVERVLGLIQSFDPTGVGARDLRECLLIQIRFLGLEGSLIETIVG
                     EYLPKLEAR"
     gene            complement(653..>1165)
                     /locus_tag="VE844_15420"
     CDS             complement(653..>1165)
                     /locus_tag="VE844_15420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014066271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZC02686.1"
                     /translation="PQEPSVFRGLTVEENIMAVLELQPLSRLERQRRATELLAEFGLD
                     RFRQRLTPSLSGGERRRVEIARALAASPTFLLLDEPFAGIDPIMIEELQQLVCQLKER
                     GLGVLITDHRVRETLEITDRAYIIHQGRILESGTPRQLAENERVITTYFGEKFALDIG
                     QPWVSKPNSH"
BASE COUNT          239 a          341 c          323 g          262 t
ORIGIN      
        1 cgggcttcaa gcttaggaag gtactccccg acaatcgtct cgatgagtga gccttccaag
       61 ccgagaaagc ggatctggat caacaggcat tcgcgcagat cacgcgcgcc cacacccgtc
      121 ggatcgaagg actgaatcag ccccaggacc cgttcgacgg tcgcacggtc gagttgggtg
      181 gctgccatgg cttcgtcaag gtcgcagcgc agatagcctt cctcgtcgat attcccgatg
      241 agaaaagctc caacgcgccg ctcttgctcg tccgtggtgg ccatcattag ttgcgccagc
      301 agatgctcgt tgagcgtcgt aggcgtatgg acggtgttct cgtaggagaa gcgctcttca
      361 tactcctcgg acgggaggcc tttccactcc caatcctcag ggaaatactc cccccaattg
      421 atgtcataca actctttccc atccgtcacg ctgtccgcgg gagtatccgt gaggctctgg
      481 gcctcgtcct catcggccgg cgtgtaaccg tcctcggcaa gggccacctc ttccagcata
      541 ggattctcca tgagctcctg gcgaatcact tggaccagtt ccaagcgcgc catcggcagg
      601 agcttgatcg cctgctggag catggcggtc atgacgagtt tttgcgtctg tttcagtgag
      661 agtttggttt cgagacccat ggttgaccaa tatccaatgc gaatttttca ccgaaatacg
      721 ttgtgatcac tcgttcattt tctgccagtt gacgtggtgt tccactttcg agaatacgcc
      781 cctgatggat gatgtatgcc cggtcggtaa tctccaaagt ttcgcgcacg cggtggtcag
      841 tgatgaggac cccaaggccg cgttctttca gttgacagac caattgttga agctcctcga
      901 tcatgatcgg atcaataccg gcaaaaggct catccagcag gagaaaggtc ggggatgccg
      961 ccagggcccg ggcgatctcg acccggcgcc gttcgccccc tgaaagtgag ggggtcaatc
     1021 gctgccgaaa gcgatcgagg ccaaattcgg ccaggagttc tgtggcacga cgctggcgct
     1081 cgagtctcga caacggttgt aactccaaca ctgccataat gttctcttcc accgtcagac
     1141 cacgaaagac tgaaggctct tgcgg
//
LOCUS       DASQSL010001508         1278 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_160887, whole genome shotgun sequence.
ACCESSION   DASQSL010001508 DASQSL010000000
VERSION     DASQSL010001508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1278
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160887"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1278
                     /locus_tag="VE844_15425"
     rRNA            <1..>1278
                     /locus_tag="VE844_15425"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          304 a          315 c          442 g          217 t
ORIGIN      
        1 gacccccgta tgcgaaacgt ctgcgactcc gtggcatggc acctgagtac catggggcac
       61 gagcaacccc gtgggaatct gggaggacca tcttccaagg ctaagtacta cctgatgacc
      121 gatagtgaac gagtaccgtg agggaaaggt gaaaagtacc ccgggagggg agtgaaatag
      181 tacctgaaac cgtgggccta caagctgtcg gagctcgtgc tgggcaacca gcgcgggtga
      241 cggcgtgcct tttgaagaat gagccggtga gttagcggtg cgcggcgagg ttaacccttg
      301 aggggaagcc gtagcgaaag cgagtccgaa acgggcgcca tagtcgcgtg ctctagaccc
      361 gaagccgagt gatctaccca tgggcaggct gaagcggggg taagaccccg tggagggccg
      421 aacccaccag ggttgaaaac ctgggggatg acctgtgggt aggggtgaaa ggccaatcaa
      481 actcggtgat agctggttct ccccgaaatg catttaggtg cagcctcgag cattcagcag
      541 cggaggtaga gcactgcttg ggctaggggg cctacaagct taccaacccc aggcaaactc
      601 cgaatgccgc tgctttagag cacggcagtg agactgcggg ggataagctc cgtagtcgag
      661 agggaaacag cccagatcgc cagctaaggc ccctaattcc gtgctaagtg ggaaaggatg
      721 tggagtcgca cagacaacca ggaggttggc ttagaagcag ccacccttga aagagtgcgt
      781 aacagctcac tggtcgagtg atttcgcgcc gataatgtag cggggctaag caaagtaccg
      841 aagctgcggg attgtcgttc ttaattgaat gatgatcggt aggggagcgt tcccacgcgg
      901 gtgaagcggc ggggtaaccc agccgtggat gcgtgggaag tgagaatgcc ggcatgagta
      961 gcgaaagacg ggggaggaac ccgtccgccg aatgcccaag gtttcctggg gaaggttcat
     1021 ccgcccaggg ttagtcggga cctaagccga ggccgagagg cgtaggcgat ggacaactgg
     1081 ttgatattcc agtaccacct cgatcgcgcc aaggccgaat ccgagttgct aagggaaccc
     1141 ctccttcggg aggggctacc gacccactcg gtagtaggcc agcgaagggg ggacgcagga
     1201 gggtaggtcg tcccaggcga tggtcgtcct ggggtaagcg tgtaggggtg gctctagaca
     1261 aatgcggagc cgcataac
//
LOCUS       DASQSL010001509         1101 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_170755, whole genome shotgun sequence.
ACCESSION   DASQSL010001509 DASQSL010000000
VERSION     DASQSL010001509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170755"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..991
                     /locus_tag="VE844_15430"
     CDS             <1..991
                     /locus_tag="VE844_15430"
                     /inference="COORDINATES: protein motif:HMM:NF033591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC02687.1"
                     /translation="ERLGIYSSLTPQPIGNKQRPVIIIDWSDLDECKRHFLWRASVPV
                     EGRSLTLYEEVHTLGSKEKPKTHRRFLQTLQKRLPPHCRPILVTEAGVRTPWFKQVEE
                     LGWDWVGRIRNRHEVQLPGEAPWVPCKSVYPRATSIPKPWGRAGVTPSNPIACQLGLY
                     KAKPKGRVPLNRLGQASQSAHSRNHTKAQREPGLLGPSLPAGFKLAQKVVKLYALRMR
                     IEEAFRDLKSTRFGLSLELHPTYQLEPLQGLLLIATLALRVAWLLGTATQLTGQHRHY
                     QANTVRDRVALSTIFLDLKVIDDPRVTLRLADLLAAIKSLDEIIRSHCLAEYF"
BASE COUNT          226 a          340 c          312 g          223 t
ORIGIN      
        1 ggagcgcttg ggcatctatt catcgctcac cccgcagcct atcggcaaca agcaacgccc
       61 ggtgattatt atcgattggt ctgatctgga tgaatgtaag cggcattttc tctggagggc
      121 ttcggtgccg gtggagggcc gttcgctgac cttatatgaa gaggtgcaca ccctcgggag
      181 caaggaaaag cctaagaccc accggcgatt tctgcagact cttcagaaga ggctaccgcc
      241 ccattgtcga ccgatcttgg tcaccgaggc gggggttcgc accccctggt tcaagcaagt
      301 ggaggagttg ggctgggatt gggtaggacg catccgcaat cgccatgagg tgcaactccc
      361 gggcgaggcg ccgtgggtcc cttgtaagag cgtgtaccct cgagccacct ccataccgaa
      421 gccctggggc cgagcgggcg tgacgccgag caatccgatc gcctgtcagt tgggactgta
      481 taaggccaaa cccaaaggcc gcgtccctct caatcgcctt ggccaagcct cccagtccgc
      541 tcacagccgc aaccacacaa aggcccaacg cgagcctggg ttactgggcc cctccctccc
      601 cgcgggcttc aagctcgcac agaaagtggt caagctctat gccttgagga tgagaatcga
      661 ggaggctttc cgggatctga aaagcacccg cttcggcctg agcctcgaac tccatcctac
      721 ctatcaactc gagcccttgc aggggctctt gctcatcgcc accctcgccc tgagggtggc
      781 ttggctcctc ggcacggcca cccagctcac cggacaacat cgccactacc aagccaacac
      841 cgtgcgagac cgggtggccc tctcaacgat atttctcgac ctcaaggtta tagatgaccc
      901 tcgggtgaca ttgcgactgg ctgacctgct cgcggccatc aaaagcctcg atgaaatcat
      961 acgcagccat tgcctggcgg agtatttttg agtgatattt gtggggatac cacagggtct
     1021 gtccccctat tcgctcgcgg ttgagtgtaa gccgttcggt agcaatagcc ggacgggtaa
     1081 ggtatcggca tgaagtcttc t
//
LOCUS       DASQSL010001510         1729 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_133861, whole genome shotgun sequence.
ACCESSION   DASQSL010001510 DASQSL010000000
VERSION     DASQSL010001510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1729
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133861"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            170..>1729
                     /locus_tag="VE844_15435"
     CDS             170..>1729
                     /locus_tag="VE844_15435"
                     /inference="COORDINATES: protein motif:HMM:NF017081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MASE1 domain-containing protein"
                     /protein_id="HZC02688.1"
                     /translation="MALRSRALPYLAQVLLLAIIYFTTAKLGLMLAIPPGNATAVWPP
                     SGIALAAVLWLGYRLWPAVWLGATLVNAMTGVSPVIATSIGIGNTLEALLGAFLLRRV
                     ADYHGPFEHVRQVFNFVLFAGVSCLIAATVGATGLYLEGLLDGLSYLSNWWTWWLGDV
                     VGILVMTPLLLAWGRRFQITWRPRLSGEILCFYGLLLTVGQMVFGHWLPSPITKPLAY
                     LLIPFILWATFRFSQGELVTAIAVIAAIALGGTVHGLGPFVGGTVHQSLFLLQIFIGF
                     FALLGFTLSAVESERRRAEQALRRMRDDLECRVQERTSGLENANQALREARNELEQRI
                     REHTADLVKANAQLKEEIAQRKRTEGVLRESEERFRMMADSAPILIWVADADRHCTYF
                     NRGWLEFTGRSLEQERGYPWLQDVHPEDLDRCLRAYVTAFDMHQPLRIEYRMKRHDMV
                     YRWLLDSVVPRYLLEGTFVGYIGGAIDITERKQAEASRDQLAAIVESSDDAIIGKTLE
                     GIITSWNSGAEK"
BASE COUNT          327 a          460 c          519 g          423 t
ORIGIN      
        1 aaacctagcc gctatgcgat tcccactacg ctacgggtgt ttcttccggc gtggtgtgac
       61 gagtgacccg atactgtttt gcccccaaag ggttggagaa tatcacagcc gcgcgtggtc
      121 attatcgcgg ccgggagtga aaggataatt tttcgtttca ttgattgtca tggccctaag
      181 atcccgcgct ttgccctatt tggcgcaagt gctactgctt gcgattattt atttcactac
      241 ggccaaactg ggcctgatgt tggctatccc gcctggcaat gccaccgcgg tttggccccc
      301 ttccggtatt gcgctggctg cggttctgtg gctcggttat cgcctctggc ccgctgtctg
      361 gttaggagcc actctggtga acgcgatgac gggagtatca ccggtcattg caacgagcat
      421 agggatcggt aataccttgg aggcgctgct gggcgccttt ttattgcgcc gagttgccga
      481 ttaccacggc cctttcgagc acgtccgaca ggtcttcaac ttcgtccttt ttgccggagt
      541 cagctgcctg atagccgcca ccgtgggtgc gaccggtctg tatctggaag gtcttctcga
      601 tgggctgtct tacctctcca attggtggac ctggtggtta ggggatgtag tcggcatcct
      661 cgtcatgacc cctttgctat tggcctgggg gagacggttt cagatcacct ggagacctcg
      721 tttatcgggt gagatccttt gcttttatgg actgctcttg actgttggcc agatggtgtt
      781 tggccattgg ctgccgagcc cgatcaccaa gccactggcc tatctgctga tcccttttat
      841 cctctgggcc acgtttcgtt tcagccaagg ggaattggtc acggcaattg cggtaatcgc
      901 cgcgatcgcg ctcgggggta cagtccatgg cttgggcccc tttgttgggg gcacagtgca
      961 tcaatcctta ttcttgctgc agatcttcat cggttttttt gctttgctcg ggtttacttt
     1021 gtctgctgtt gagagcgaac gcaggcgagc ggaacaggcg ttgcgcagga tgcgcgatga
     1081 cttagaatgc cgggttcaag aacgtacgtc agggttggag aacgccaacc aagctctgcg
     1141 ggaggcccgg aacgagttag agcagcggat cagagagcac acggccgacc tcgtgaaggc
     1201 gaatgcacag cttaaggagg aaattgcgca acgcaaacgt accgagggag tactgcggga
     1261 gagcgaggaa cgcttccgga tgatggcaga ctcagcacct atcctgatct gggtggccga
     1321 tgctgaccgg cactgcacct acttcaaccg gggatggctg gagttcaccg gccgctccct
     1381 ggagcaggag cgaggctatc cttggctaca ggatgtccat ccggaggatc tcgaccgctg
     1441 cctacgcgcc tacgtcacag cgttcgacat gcatcaaccc ttgcggatag agtatcggat
     1501 gaaacgccat gacatggttt accgctggct cctggacagc gtggtcccgc gttatttgct
     1561 ggagggcacc tttgtcggct atatcggagg ggccatcgat atcaccgagc gcaagcaggc
     1621 agaagcatcg cgagatcaat tggcagcgat tgtggaatcc tcggatgacg ccatcattgg
     1681 caagacctta gaggggatca tcaccagttg gaactcaggc gctgagaag
//
LOCUS       DASQSL010001511         1042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_133888, whole genome shotgun sequence.
ACCESSION   DASQSL010001511 DASQSL010000000
VERSION     DASQSL010001511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1042
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133888"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(50..>1042)
                     /gene="rho"
                     /locus_tag="VE844_15440"
     CDS             complement(50..>1042)
                     /gene="rho"
                     /locus_tag="VE844_15440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005003334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HZC02689.1"
                     /translation="FNLRTGDTISGKIRPPKDGERYFALLKVNEINFETPDAAKNKAL
                     FENLTPLHAFERLKLEVGNGSTEDLTPRVIDLVAPIGKGQRGLIVSPPKAGKTMMLQG
                     IAHSLAINHPECYLIVLLIDERPEEVTEMERSVKGEVISSTFDEPASRHVQVAEMVIE
                     KAKRLVEHKLDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQKPKRFFGAARK
                     IEEAGSLTIIATALIDTGSKMDDVIYEEFKGTGNMEIHLDRRIHEKRIFPAININRSG
                     TRREELLTESDELQKMWILRKLLHPMDEVAAMEFLLERLKMTKVNTDFFDAMKR"
BASE COUNT          210 a          283 c          296 g          253 t
ORIGIN      
        1 tggagcacct taatacacac tgtcgggtct tgctaaagcg caaaatggct tagcgcttca
       61 tggcgtcgaa gaagtcggtg ttgaccttag tcatcttgag acgctcgagt aaaaattcca
      121 tcgccgcgac ttcatccatg ggatggagca gtttgcgcag gatccacatc ttctgcaatt
      181 cgtcggactc ggtcaggagt tcctcacggc gcgtacccga acggttaatg ttgatggccg
      241 ggaagatccg cttttcgtgg atgcgccgat ccagatggat ctccatgttc ccggtacctt
      301 taaattcctc gtagatcaca tcgtccatct tggagccggt atcgatgagg gcggtcgcga
      361 tgatggtcag gctgccggcc tcctcgatct tgcgggcggc gccaaagaac cgcttgggct
      421 tttgtaaggc attggcatcc acacctccag ttaacacctt ccccgaggca ggcacgaccg
      481 tattataggc gcgcgccaag cgggtgatgg agtcgagcag gattactaca tccagcttgt
      541 gttcaaccag gcgcttagcc ttctctatga ccatttccgc gacttggaca tggcggctgg
      601 caggctcatc aaaggtgctc gagatgacct cgcccttgac cgatcgctcc atctcggtca
      661 cttcttcagg gcgttcatcg atcaagagta cgatcagata gcattccggg tgattgatgg
      721 cgagcgaatg ggcgatgcct tgcagcatca tggtcttgcc cgctttaggc ggcgacacaa
      781 tgaggccgcg ttggcctttg ccgatcggcg ccaccagatc gatcacccgc ggcgtcagat
      841 cctcggtgct gccgttaccg acctcaagct tgaggcgttc aaaggcatgc aacggtgtca
      901 gattctcaaa caaggccttg tttttggctg cgtcgggggt ttcaaaattg atctcgttga
      961 ccttgagcag cgcaaaatag cgttcgccgt ctttcggtgg gcggatcttg ccggagatgg
     1021 tatcgccggt acgtagattg aa
//
LOCUS       DASQSL010001512         1561 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_170766, whole genome shotgun sequence.
ACCESSION   DASQSL010001512 DASQSL010000000
VERSION     DASQSL010001512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1561
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170766"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(86..949)
                     /locus_tag="VE844_15445"
     CDS             complement(86..949)
                     /locus_tag="VE844_15445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012830409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HZC02690.1"
                     /translation="MQSEIEGTGLKVNPSGLGAMPLSIAGRPDEIEALAVIEAFVEVG
                     GDFIDTANVYCLDDADIGHNERLIDRALRRIGKRDAVVIATKGGLRRPKGAWTVDGSP
                     KWLRRSCEQSLKDLNTDTITLYQLHAVDPDIDFQASLGELIKLKEEGKILHLGLSNID
                     PQHLEIALRYTPIASVQNRCNPFYKKDFKNGLIALCKAKGVTYLPHSPVGGHHGHLRL
                     PKDPLFRRLAVKYGASPYSLALAWLLHKGGHIVLIPGASKVSSVRDSAQASAIKMAQE
                     DLAAIDRMPDG"
     gene            complement(971..>1561)
                     /locus_tag="VE844_15450"
     CDS             complement(971..>1561)
                     /locus_tag="VE844_15450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015279126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZC02691.1"
                     /translation="EYDRHALEVLREPLEAGYVSVSRAAYQADFPAQAQMLAAMNPCP
                     CGFLGDSHRCRCTPEQVRRYRSRISGPLLDRIDMHIEVPKVPREVLLDEEPQSESSAV
                     VRERVCRARERQIERSGKPNSQLNNREIQRYCHLEQADINLLSAAIDRLGLSARSVHR
                     ILKVARTIADLVGSEAIQRPHLAEAISYRRLERVGH"
BASE COUNT          338 a          478 c          401 g          344 t
ORIGIN      
        1 aattccaaat ctagaattgc tactccctcc ccacccctca ctcctcacac ttcactcatg
       61 agggggggtg tgcctgatcg atgcctcagc catccggcat ccgatcgatc gccgcgaggt
      121 cctcctgggc cattttgatc gcgctggcct gggcgctgtc gcggacactg gatactttac
      181 tcgctccggg gatcaagacg atatgtccgc ctttatggag cagccaggcg agcgcaaggg
      241 agtacggaga agccccatat tttacggcta gacgccggaa caacggatcc ttgggtaagc
      301 gcagatgacc gtgatgaccg cccaccgggc tatggggaag gtaagtcact cctttagcct
      361 tacaaagcgc gatcagaccg ttcttgaagt ccttcttata gaagggatta cagcgattct
      421 gcaccgaggc gataggggta taccttaagg ctatttcgag gtgttgagga tcgatattcg
      481 ataaaccaag gtgcaggatc tttccctctt ccttgagttt tatcaactct cccagtgacg
      541 cttgaaaatc gatgtccgga tcgacggcat ggagttgata gagggtgatg gtatcggtgt
      601 ttaagtcctt aagactctgt tcgcacgagc ggcgcagcca cttggggctg ccatccaccg
      661 tccatgcccc cttcgggcgc ctcaatccgc ctttggtggc aatgactacc gcatcacgct
      721 tgccaatcct tcggagcgcc cgatcgatca agcgttcgtt atgaccgata tcggcatcat
      781 caaggcaata gacattggcc gtgtcgatga aatctccacc gacctcaaca aaggcctcaa
      841 tcacagcgag agcctctatc tcatccggac gtccggcaat tgacaaaggc atcgccccaa
      901 gcccactcgg attaacctta agtccggtac cctcgatctc gctctgcatg agtattcccc
      961 ctggctgctg ttaatggcct acacgttcca atcgccgata agagatcgcc tcggccaaat
     1021 gcggcctctg tatcgcctcg ctgcccacaa gatccgcaat cgtgcgcgct accttcaaga
     1081 tccggtgcac cgatcgcgcc gacaacccga gccgatcgat cgcggcgctc aatagattga
     1141 tatccgcctg ctcaaggtga caatagcgct ggatctcccg attgttcagc tggctattgg
     1201 gcttaccgct ccgctcgatt tgacgctcgc gggctctaca aacacgttct cgaaccaccg
     1261 cactggactc tgattggggc tcctcatcca ataaaacctc acggggaacc ttaggcacct
     1321 cgatgtgcat atcgatgcga tccaacagcg gtcccgagat ccttgagcga tagcgccgaa
     1381 cttgctcggg cgtacagcgg cagcggtgac tgtctcccag aaatccgcac ggacagggat
     1441 tcatggccgc cagcatttgg gcttgcgctg gaaaatccgc ctgataggcg gcccgtgaga
     1501 cgctcacata gcccgcctcc aggggttcac gcagcacttc gagcgcatgc cgatcatact
     1561 c
//
LOCUS       DASQSL010001513         1514 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_133930, whole genome shotgun sequence.
ACCESSION   DASQSL010001513 DASQSL010000000
VERSION     DASQSL010001513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1514)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1514)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1514
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133930"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            393..1397
                     /locus_tag="VE844_15455"
     CDS             393..1397
                     /locus_tag="VE844_15455"
                     /inference="COORDINATES: protein motif:HMM:NF033547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HZC02692.1"
                     /translation="MPVLAYVHHLFNVDQCHAYIHTLRWKDRPLQCPRCQSQDVDPWG
                     QYHYRPGCKRYWCNGCKRTFNDLTDTLLHQSKRSLPYWILATFLLCLSCSSRRIAREL
                     GVHGRTSYRWCWWLRNTAVSYEIDRQVAGTVEADDLYHTAGQKGQAKQGGAKHLGRRP
                     RGRRKKREPGRGHYDKDRPAIIAWVSRQGAVVIQATRDFTVKTVQKAADLAVQAGSQL
                     YTDSASSYRAVKGYVHAFVNHTQKEYARGDVHENRAECLFSLLKPYLRVFRGLSKCNL
                     PGYVGFFQFLRNFRQHNACEQAEMILYAALDPSIARRASKGEFVRCLDQFDLLQTAIN
                     "
BASE COUNT          327 a          427 c          462 g          298 t
ORIGIN      
        1 ttcctgatca ggttggccag acgcaggggg aagggagcca ggggattgac gcacggcgga
       61 cgactagtcg gagatcaccg tgggaatccg tggtgtcgcc cgtgcatcga gcggctccga
      121 cgaaagagca accgagaagt cgccaatccc tggagagccg gatgctcgga aacgggcacg
      181 tccggttcgg aggggggaga gaggaaacgg agcttggagc taccgcacct tgctcctacc
      241 ctacaaaatg ggcaagctcg atgccaggaa tgctgtagtt tcacaagtcg ctcaatttat
      301 cggagtttgt agcagcgcag aaacgtgcga aatggatgag aatctccttt ccgtgtccga
      361 tccaatttca cgcccccagg agagactcat ccatgccggt gcttgcatac gtccaccacc
      421 tcttcaacgt tgaccagtgt cacgcctata tccatacgct gcgatggaaa gatcgtcccc
      481 tccaatgtcc ccggtgccag agccaggacg tcgatccgtg ggggcagtat cactaccgcc
      541 ccgggtgcaa acgctactgg tgcaacggct gcaagcgcac cttcaatgac ctcaccgata
      601 cgctgctcca ccagagcaag cgatcgctgc catactggat tctcgccacc ttcctgttgt
      661 gcctatcgtg ctcgtctcga cgtattgcgc gagagctggg ggtgcatggc cgtacgagct
      721 atcgctggtg ctggtggcta cgcaatacgg ccgtctccta cgaaatcgat cgtcaggtgg
      781 cagggacagt ggaagcggat gacctctatc acaccgccgg ccagaaaggc caagccaagc
      841 agggtggcgc aaagcatctg gggcgccgac cgcgtggtcg ccgcaagaag cgtgagcccg
      901 gccggggcca ttatgacaaa gaccggccag cgattattgc gtgggtcagt cgccaggggg
      961 cggtcgtcat acaagcgacc cgcgatttca ccgtgaagac ggtccagaag gcagcagact
     1021 tggcagtcca agcggggagt cagctctata ccgactcggc cagcagctat cgggcggtga
     1081 agggctacgt gcacgcgttc gtgaatcaca cgcagaaaga gtacgcccgg ggtgacgtgc
     1141 acgagaatcg ggcggagtgc ctgttctcct tactcaagcc gtatctgcga gtgtttcgtg
     1201 gtctcagcaa gtgcaacctg ccgggttacg tcgggttctt ccaattcctg cggaactttc
     1261 gtcaacacaa tgcctgtgag caggccgaga tgatcttgta tgcggccctc gacccctcta
     1321 ttgcgcgcag agccagcaag ggagagtttg tccgatgctt ggaccagttt gatcttctac
     1381 aaacagcgat aaattgagcg aacaggtttg ggttttcggg aaggacaggt ctaaagtcgc
     1441 gtgtttatga gagaaatccc ggtcaggctc tctcgcgggg ggtagtcagg cgcactgctt
     1501 cactcaccct gctt
//
LOCUS       DASQSL010001514         1270 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_133934, whole genome shotgun sequence.
ACCESSION   DASQSL010001514 DASQSL010000000
VERSION     DASQSL010001514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1270
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133934"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(45..308)
                     /locus_tag="VE844_15460"
     CDS             complement(45..308)
                     /locus_tag="VE844_15460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02693.1"
                     /translation="MRYENGIPANRRPLAVLYTIPTILFIFVGLLAATVVAVVGLGRA
                     IEWVGIYLPVVVVLGVFVGVFVLFVREGGKVYAKFYDELYKRL"
     gene            743..961
                     /locus_tag="VE844_15465"
     CDS             743..961
                     /locus_tag="VE844_15465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02694.1"
                     /translation="MRSVEQHQLKEMPQLAEGWIAQDSTVSQDTTVKKVGKQVSDSET
                     SRPEFVRLVTQCSILVVIGGIVAGLIAA"
BASE COUNT          306 a          364 c          349 g          251 t
ORIGIN      
        1 gttctcagaa gttcgccagg gccgaatcct ccgaagtagt tcgtctagag acgcttgtag
       61 agctcgtcgt agaactttgc gtagaccttt ccgccctccc gtacaaagag gacgaacact
      121 ccgacaaaca cgccgagtac caccaccacg gggaggtaga tgccgaccca ctcgatcgcc
      181 ctgcccagcc ccaccaccgc aacgacggtg gcggccagca ggcccacgaa tatgaagagg
      241 atcgtgggta tcgtgtagag caccgcgagg gggcggcggt tggcagggat tccgttctcg
      301 tacctcatag cgtgcctcat tagcccaacc tgctacttcc tcatcccgca gtcggtcgct
      361 ccgaccacaa cagtagcgta ggggtttggg cgcatcggca catcccccaa agggatgata
      421 tttgctgcta cttaacagtg gcaagcgggt gctttgaggt ataggcaggc ctattcacct
      481 aagtgcgtgg aatgtatgtt ctcagaagtt cgcaaagaga ggacattcta gaaagttttc
      541 acattctcat cctattctca tcccatcctc agcccactct catataccgc tgttagttat
      601 attagttata aagactcaac cggagaggga agggagccat ctccatctag aggccgctac
      661 aggatgaatg gaggggagca gacccaagag cggctagcac tctactttac tccccgctcc
      721 tacccctaca gaggagaagt atatgaggtc agtagaacaa caccaactta aagagatgcc
      781 gcagctagcg gagggctgga tagcacaaga tagcaccgtc tcacaagaca ccacggtcaa
      841 gaaggtgggt aagcaggtct ccgattcgga gacctcacgg ccggagtttg taaggctagt
      901 gacccaatgt tcgattctcg tcgtgattgg gggcatcgtg gcagggctca tcgcagccta
      961 agggtaggct taggcaaagt cagcttccat actaagccgg ggaccccaga gggcgggtcc
     1021 ccggcttttc tctcatcctt atttacccaa ggatgtggag cgactgcttg agaaagcgag
     1081 cggggcgggt ggctgacgta cgctccgacg catgggaaag acctacccga ccgatcttag
     1141 cgacaccgaa tggcaatcat cgagccccag gttccgtccc ccaacaagcg aggacgccca
     1201 agggcccacg ccgcccgcta gatactcgac gccagcttct atgtctcaag agcggttgtc
     1261 cacggaggat
//
LOCUS       DASQSL010001515         1147 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_147886, whole genome shotgun sequence.
ACCESSION   DASQSL010001515 DASQSL010000000
VERSION     DASQSL010001515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1147
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147886"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            121..762
                     /locus_tag="VE844_15470"
     CDS             121..762
                     /locus_tag="VE844_15470"
                     /inference="COORDINATES: protein motif:HMM:NF025000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC02695.1"
                     /translation="MLTYNTLKDKAKEFLAVTGLKIEEFARLLPAFESGYCTLYSADK
                     TAEGKTRRRQPGGGTKAVLQTVEDQLLFILVYQKTYPLQTRHGLQVGLSQSQTHYWIH
                     RLLRVLQRALADLKMAPEREGQKVGHSPLVNEGTPDRLLEGTERGRQRPNDATRQKAH
                     YSGKKRAHTDKNLRLVHEQTGKGVYSQARRSRAKSPIRKRPMRPPFIFPRMPL"
BASE COUNT          295 a          313 c          320 g          219 t
ORIGIN      
        1 tgggacaggt gccgctcctg tttcccggga tctcgcggat atgttggctg gcaagctcgg
       61 gatcgttcat agcgacaggt ccatcaatag acattatcgg taataggata taatcgccaa
      121 atgctaacct acaacacatt gaaagacaaa gcgaaggagt ttctggcggt gactgggctg
      181 aagatcgaag aattcgcccg attgctgccc gcctttgagt ctggctactg cacgctttat
      241 tctgcagaca aaaccgctga gggcaagacg cgccgacgcc agcccggtgg ggggaccaaa
      301 gccgttttgc agaccgttga agaccaattg ctgttcatac tggtctatca aaagacgtat
      361 ccattgcaaa cccggcacgg gttgcaagtt ggcctgagtc agtcacaaac ccattactgg
      421 attcaccggc tgctgagggt gctgcagcgt gccctagcgg atctgaaaat ggcgccggaa
      481 cgcgagggtc agaaggtggg ccacagcccg ttagtcaacg agggcacccc ggatcggctc
      541 ctagagggca ccgagcgcgg gcgccaacgc ccgaacgacg ctacccggca gaaagcccat
      601 tacagcggta agaagcgggc ccatacggac aagaacctca ggctagtgca cgagcagacg
      661 ggtaaagggg tctattctca agcccgacgg tcgagggcaa aaagcccgat aagaaagcgg
      721 ccgatgaggc cgccattcat tttcccaaga atgccactct gagcaaagat accggctttc
      781 aaggctatga ggcggcgggc gtgatcaccc gccagccaaa aaaaagccca aaggtaaagc
      841 actcagccag agcgacaaac tgctcaactg catcctctcc ggtacgcgcg tgaaagtcga
      901 acacgccctt gccggcgtca agcggtgctg gatggtcaaa gatggttttc ggctcaccaa
      961 acaggggatc tcggacttgg tcatggagat tgcctgtggt ttacacaatc tccgcatctc
     1021 tatccggcac ccgttgccta cgttcgattt gctaagcttc gttagcaatg cttaaacccg
     1081 ataatgtcca atataggaga cggtgtttaa gaatggagga aagccatgct actaaacccg
     1141 caaccct
//
LOCUS       DASQSL010001516         1243 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_35347, whole genome shotgun sequence.
ACCESSION   DASQSL010001516 DASQSL010000000
VERSION     DASQSL010001516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1243
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35347"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1213
                     /locus_tag="VE844_15475"
     CDS             <1..1213
                     /locus_tag="VE844_15475"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZC02696.1"
                     /translation="AWNFKRITDPAEKAFAEGFFDPIEAVEPIDAHTVQFRLKHPSLT
                     LLPTLAVYRVGFLLMSPTSYKTWGREEVRLHPAGTGPFKLAKWEPNNLIVLEKHPNYF
                     KPGLPYVDRLEFKIMKDGITRVTALRAGEVDFVNYVPREYVERLAKDPKVQVYRGRET
                     QHLMIFFHNTRKPFDDVRVRQALAGYGIDRHAIAKSALLGQGQALWSYVPPGGRDHLD
                     FGERFPYNPDKAKALLKEAGFDEKHPLKYTLTTHAAEPALPTVATIMKTQLAQIGVEV
                     TIEIIDRPVFLRRLNTDRDTEQVINLSSNVFDPYARRFVLDSRKGANPTNHQEARVNE
                     LLDQLAQTTDPAEYTRLGHDLQRYVTEHMLYASLTSLPTIEAAREHVKGYEFLHGFKK
                     RFERAWLEKGK"
BASE COUNT          273 a          375 c          358 g          237 t
ORIGIN      
        1 ggcgtggaac ttcaagcgga tcaccgatcc ggcggagaag gcgttcgccg agggattttt
       61 cgaccccatc gaggcggtgg aaccgatcga tgcccacacg gtgcagttca ggctgaagca
      121 tccaagcctc accctgctcc cgaccctcgc ggtgtatcgg gtgggctttt tgctgatgtc
      181 gcccacctcg tataagacct gggggaggga ggaggtccgg ctccatccgg ccggaaccgg
      241 gccgtttaag ctcgccaagt gggagccaaa caacctgatc gtcctggaga agcaccccaa
      301 ctattttaag ccggggctcc cctatgtgga tcgcctcgag ttcaagatca tgaaggatgg
      361 catcacccgc gtcaccgcgc tgcgggcagg cgaggtggat ttcgttaact atgtcccgcg
      421 agagtatgtg gagcgcctcg ccaaagatcc caaagtgcag gtctatcgcg ggcgtgaaac
      481 ccaacatctg atgatctttt ttcacaatac cagaaaaccc ttcgacgatg ttcgtgtacg
      541 gcaggcgctg gctggctatg gtatcgaccg ccacgcaatt gccaagtcgg ccctcttagg
      601 gcaaggccag gctctctgga gctatgtgcc gccaggcggc agagatcatc tcgactttgg
      661 cgagcgcttt ccctacaacc ctgacaaggc caaagccctc ctgaaagagg ctggctttga
      721 cgagaagcat cccctcaagt ataccctcac gacccacgcc gccgagccgg cgctgcccac
      781 cgtcgccacc atcatgaaga cgcaattggc ccagatcggc gtcgaggtga ccattgagat
      841 catcgaccga cccgttttcc tgcggcgact caacacggat cgggacacgg agcaggtcat
      901 caacctgtct tccaatgttt tcgatcccta tgcccgtcgg ttcgtcctgg atagtcgaaa
      961 gggcgcgaac cccacgaatc atcaggaggc acgggtcaat gagctgctgg atcagctggc
     1021 gcagacgacg gaccccgccg agtacacccg gttaggccat gacctccagc gctatgtgac
     1081 ggagcacatg ctctatgcga gtctgaccag tctccctacc attgaggctg cacgtgaaca
     1141 tgtcaaaggg tacgaattcc tgcacgggtt caaaaaacgc ttcgagcggg cctggctcga
     1201 gaaggggaaa taagccgagc aggggtagtg ttaaactcac cgg
//
LOCUS       DASQSL010001517         1012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_13434, whole genome shotgun sequence.
ACCESSION   DASQSL010001517 DASQSL010000000
VERSION     DASQSL010001517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13434"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..841)
                     /locus_tag="VE844_15480"
     CDS             complement(<1..841)
                     /locus_tag="VE844_15480"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HZC02697.1"
                     /translation="MSEFTQHSVVATPALTRRQFLGTTGATGLLAMLALPQAPVFAQR
                     REVSMITWNHFVPASDERLKEIAADFGKRNNVNLQIDTIAHLQVPQKLAAEVQTRTGH
                     DLVWMYNELPYLYEQQLVPMDDLVSAVEKQYGGLYPFAKESAFVNGTWRALPWMWISF
                     PGTYNQLLFAKYGQQVPDTWDDLLKAGWALKKAGHPVGIAISHCTDANTTFWSILWCY
                     GGKVLDADGKTVALNSPQTQQVLEYYRALYHDAMDAEVLSWDDASNNRCVLAGKCAWI
                     HNPV"
BASE COUNT          206 a          311 c          280 g          215 t
ORIGIN      
        1 tcacgggatt gtggatccag gcgcacttgc cggccaggac acagcggtta ttgctggcat
       61 cgtcccagga cagcacctct gcatccatgg cgtcatgata gagcgccctg taatactcca
      121 ggacttgctg cgtctgcggc gagttcagag ccacagtttt gccatctgca tcgagcacct
      181 ttcccccgta gcaccagagg atagaccaga aggtcgtatt ggcatcggtg cagtggctaa
      241 tggcaatccc caccggatgg ccggctttct tcaacgccca ccccgccttc aggaggtcat
      301 cccaggtatc ggggacctgt tgtccgtact tggcgaacag cagttgatta taggtgccgg
      361 gaaacgagat ccacatccag ggcagcgctc gccatgtgcc attgacaaac gccgactctt
      421 tggcaaaggg gtagaggcca ccgtattgct tctcgacagc gctcaccagg tcgtccatag
      481 ggactaactg ttgctcgtag agatagggca gctcgttata catccacacg aggtcgtgcc
      541 cggtcctcgt ctgcacctcg gcagccagct tctgtggaac ctgtaagtgc gcaatggtgt
      601 cgatctgcaa gttgacgttg ttccgcttgc cgaagtcggc agcgatttcc ttgagacgtt
      661 catctgacgc tggcacgaag tggttccagg tgatcatact cacctcgcgc cgctgtgcaa
      721 ataccggagc ctgtggtaat gccaacatcg ctagcagccc cgtcgccccg gtggtgccaa
      781 ggaattgccg ccgcgtcaat gcaggcgtgg cgaccacgct gtgctgcgtg aactcgctca
      841 tagataccct cctcgccagc ggtcatgaga ccattcttct cgcgatgcct gtggatccat
      901 ctgccggagc cgggaatcat ttagacagag gagcctcacc cgcgccaatg tcagacaccc
      961 tgacgaccgc atcactgcgg gcattaatgc aatggacccg ccccctatgc aa
//
LOCUS       DASQSL010001518         1600 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_25177, whole genome shotgun sequence.
ACCESSION   DASQSL010001518 DASQSL010000000
VERSION     DASQSL010001518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25177"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(219..1232)
                     /gene="nuoH"
                     /locus_tag="VE844_15485"
     CDS             complement(219..1232)
                     /gene="nuoH"
                     /locus_tag="VE844_15485"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002685985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HZC02698.1"
                     /translation="MAETLFILVKIVVIVLPLMLAVAYLTFAERKIIGYIQVRIGPNR
                     VGFRGLLQPIADVIKLLFKEIIVPAGASHFLFRAAPILALAPALAAWAVVPFDSLKVL
                     ADINAGLLYILALTSMGVYGIIVAGWASNSRYAFFGAMRSAAQMVSYEIAMGFALVGV
                     LTAAGSLNLREIVLAQEGSLFHWFWLPLLPLFLVYFISGVAETNRAPFDVAEGESEIV
                     AGFHIEYSGMAFGAFFLAEYANMILISALTAILFLGGWLSPFQGLPLLESAFAWVPGI
                     VWLGLKMAVFLFLFLWFRATFPRYRYDQIMRLGWKVFIPITLVWIVVIGGLVMIAMPP
                     WFD"
     gene            complement(1225..>1600)
                     /locus_tag="VE844_15490"
     CDS             complement(1225..>1600)
                     /locus_tag="VE844_15490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Catalyzes the transfer of electrons from NADH to
                     ubiquinone; Derived by automated computational analysis
                     using gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit G"
                     /protein_id="HZC02699.1"
                     /translation="AKTAPDNEDKWLMPTHLERTAQDSLQLVSEVPIYSLDPLVRRAG
                     ALQQTVEAAAGALHINQALADALGLSAGDTAALGQNGSTIQLPLQIDARVPAGCVWLQ
                     GAHAALGLECGFGPVTLGMLNG"
BASE COUNT          392 a          481 c          446 g          281 t
ORIGIN      
        1 gttgcgtagg tcgcaatcgc gctgatgttt cccgggttca tgcgctgata ctggtcacac
       61 actggattcg gacacggttg attccaatct ttcgcttctc tcaagagcca cgtctcctac
      121 cggctggctt tctgccgaaa acccacagta gccttggctc ttctattttt caaagtatta
      181 gcggatgagt acccacagtg tattctcgaa atttaagttt aatcaaacca gggcggcatc
      241 gcgatcatca ccaacccccc aatcaccaca atccagacca gcgtgatcgg aataaatacc
      301 ttccagccca ggcgcatgat ctgatcatag cgatagcgcg gaaaggtcgc ccgaaaccac
      361 aggaacagga acagaaatac ggccatctta agacccagcc agactatccc aggcacccag
      421 gcaaaggcag actccaagag cgggagcccc tggaaggggg ataaccagcc ccccaggaac
      481 aagatggcgg tcagcgccga gatcaggatc atattggcgt attccgccag gaaaaacgcc
      541 ccaaaggcca tgccggaata ctcgatgtga aagcccgcaa cgatctccga ttcgccttcg
      601 gctacatcaa agggggcgcg attggtctcg gctacgccgg atataaaata gaccaaaaac
      661 aaaggcaaca ggggcagcca gaaccagtgg aacagactgc cttcctgagc cagcacgatc
      721 tcccgcagat taaggctgcc cgcggcggtc agtaccccaa ccagagcgaa tcccatggcg
      781 atctcgtacg ataccatctg cgctgccgaa cgcatcgcgc cgaagaaggc gtagcgtgag
      841 ttcgaggccc aaccggcgac gatgatccca tacaccccca tcgaggtcag ggcgaggata
      901 tataacagtc ccgcattgat atcggccagg accttgaggc tgtcaaaagg caccaccgcc
      961 caggctgcca gggccggggc gagtgccagg ataggggcgg cacgaaagag gaaatgactg
     1021 gcccccgcgg gcacaatgat ctccttgaac aggagcttga ttacatcggc aatgggctgg
     1081 agcagccccc gaaaacctac gcggttggga ccgatccgca cctggatgta gccaatgatc
     1141 ttgcgctcag caaaggtcag atacgcgaca gccagcatga gtggcagcac aatgaccacg
     1201 atcttgacga ggataaagag tgtttcagcc attgagcatc cccagtgtca ccgggccaaa
     1261 accacattca agccccaggg cggcatgcgc accctggagc cacacacacc ccgccggtac
     1321 ccgcgcatcg atctggagcg gaagttggat ggtgctgcca ttctgcccga gcgccgccgt
     1381 gtcgcccgct gagagaccga gcgcgtccgc taaggcctgg ttgatgtgga gggcgccagc
     1441 agcggcctcg acggtttgtt gcaatgcacc tgcccgccgt accaggggat ccaggctgta
     1501 gatagggacc tcggagacga gttgcaggct gtcctgagcg gttcgctcca ggtgtgtcgg
     1561 catcagccat ttatcctcat tgtccggggc tgtcttagcg
//
LOCUS       DASQSL010001519         1115 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_190189, whole genome shotgun sequence.
ACCESSION   DASQSL010001519 DASQSL010000000
VERSION     DASQSL010001519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1115
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190189"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(136..1038)
                     /locus_tag="VE844_15495"
     CDS             complement(136..1038)
                     /locus_tag="VE844_15495"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014780352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HZC02700.1"
                     /translation="MPEVLFYSELKSLPLLNRGKVRDIYAVGEDQLLIVTADRLSAFD
                     VVLPTPIPDKGKVLTALSYFWFERTRLLIPNHLNATPVEAILPDPAERRGLAGRTMVV
                     QRLKPLPVEAIVRGYLAGSGWKEYQKTQTVCDIPLPTGLCEADKLPEPIFTPSTKAEV
                     GKHDENISFDQAAKLLGKPLATQVKEISLRVYQEAANYALARGIIIADTKLEFGVDKA
                     GQLVLIDELLTPDSSRFWPADRYAPGHSPPSFDKQYVRDYLESIGWNKQPPAPALPPE
                     ITAKTAEKYREALQRLTDRDISRV"
BASE COUNT          245 a          283 c          327 g          260 t
ORIGIN      
        1 cgatatcgcg ggaggggagc tgcaagatgg gatagaccgt gacggtctgg gggctcaaag
       61 cgcaggcggt aatgatcaag cctataatca gggccagaag ccgattgtga tctggtcgtg
      121 tcaatcgcac gctggctaga ctcgtgaaat gtctcgatct gtcagccgct gcagggcctc
      181 gcggtatttc tcagcggtct tcgctgtgat ttcgggcggc agggccggtg caggcggttg
      241 tttattccag cctatgctct ccaggtaatc gcgcacatat tgtttgtcaa agcttggggg
      301 actatggccg ggcgcatacc tatccgccgg ccagaaacgc gaggaatcgg gggttaaaag
      361 ctcatcgatc agcaccaatt gccccgcttt atccacccca aactcgagct tagtgtcggc
      421 gataatgatg ccgcgcgcca gggcgtagtt ggccgcttct tgatagaccc tgaggctaat
      481 ctctttgact tgggtggcca gaggcttgcc taatagctta gctgcttgat caaaggagat
      541 gttctcgtca tgcttgccta cttcggcttt ggtggaaggg gtaaagatcg gttcgggtag
      601 cttatctgcc tcgcatagtc ctgtgggcaa ggggatatcg cataccgtct gagtcttttg
      661 gtactccttc catcccgaac ctgctagata accgcgcacg atggcctcaa ccggcagcgg
      721 cttgagcctt tgtaccacca tggttcggcc tgccaatccg cgccgctcgg cgggatcggg
      781 cagtatcgcc tcgacagggg tagcgttcag atggttgggg ataagaagac gggtgcgctc
      841 gaaccagaaa taggataagg cggtcaatac cttaccctta tcggggatcg gggtcgggag
      901 cacgacgtcg aaggccgata agcgatccgc cgtcacaatc aataattgat cctcgcctac
      961 ggcgtagatg tcgcggacct tgccgcgatt aagcaaaggc aggctcttaa gttctgaata
     1021 gaacaagacc tctggcattt agggcatccc cgtgggtttt aatcaagatt acattggata
     1081 gtttaaacaa aaatatccac cagtgaacta agtac
//
LOCUS       DASQSL010001520         1718 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_198438, whole genome shotgun sequence.
ACCESSION   DASQSL010001520 DASQSL010000000
VERSION     DASQSL010001520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198438"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(155..1546)
                     /locus_tag="VE844_15500"
     CDS             complement(155..1546)
                     /locus_tag="VE844_15500"
                     /inference="COORDINATES: protein motif:HMM:NF033590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC02701.1"
                     /translation="MSDFPDPTNWAVTEFADADLGDLRRTQRLVQLAHSLAQNPGATL
                     PEACGSSAMLKAAYRFFDNADIEPSDIVQSHIEATYGRLHHVPVVLAVQDTTEADWTS
                     LRATEGLGPLGCSTCQGLLVHTTLAITPERVPLGLLAQQVWARDPHDVGKRARRKQLP
                     ISEKESQKWLHSLDAVITARDCCPHTHLVSVGDREADVYDFVALERPPGVDVLIRAAW
                     DRCVRTPERYVWATLEAQPVVSDLLIEVPRRGSQPARQAVLSLRYCRLTLAPPRHRKR
                     EGLPAVELWAVLVSEREPPADTEPIEWLLLTTVAVNSVEDAIERVQWYSCRWGIEVWH
                     RILKSGCRLEARQFATADRLHRCLSLYSVLAWRIFYATMLARAVPEVPCRVLLEPEEW
                     QALYCATHRVAQPPSQPPSLGQAVQWIAQLGGFVGRRRRDRPGAEVLWRGSQHLGDLT
                     TMYCIMRPDAQSP"
BASE COUNT          390 a          497 c          516 g          315 t
ORIGIN      
        1 aaaaacttgc gggaacaaca tgataaaaag acgattcacg aaccttcgcg ggccgacggg
       61 aatggcgata gatatacagg ttcaagacgg gatgatcaca gcgatggacg ccaacctcac
      121 ccacgacgtc tgacagttgg acacaaatat tcatttatgg ggattgggca tcaggtcgca
      181 taatgcagta catggtcgtg aggtctccca aatgctgaga gccccgccac aacacttcag
      241 ctccaggccg atcacggcgg cggcgaccga caaacccacc gagctgcgcg atccactgca
      301 ccgcctgacc cagcgatggt ggctgtgatg ggggctgggc aacacgatgg gtggcgcaat
      361 agagcgcttg ccactcctcc ggctccaaca gcacacgaca ggggacctcg ggtactgcac
      421 gggccagcat ggtggcataa aaaatccgcc acgccagtac gctgtagagg ctcagacagc
      481 gatgcaagcg gtcggccgtg gcgaattggc gcgcttcgag gcggcagcca cttttcaaaa
      541 tgcgatgcca aacttcaata ccccagcggc acgagtacca ttgcacgcgt tcgatcgcgt
      601 cttcgacact gttgaccgcg accgtggtca acagcaacca ctcaatgggc tcggtgtcgg
      661 ccgggggctc gcgttcactc accaagacgg cccagagctc cactgcgggc aagccctcgc
      721 gctttcggtg acggggcggt gccaaggtca aacggcaata gcgaagcgat aacaccgctt
      781 ggcgagcggg ttgcgagccg cgtcgaggca cttcgatgag caggtcgctg accaccggct
      841 gggcctcaag cgtggcccac acatagcgct caggcgtcct cacacagcgg tcccaggcgg
      901 cacggatcaa cacgtcgacg cccggcggcc gctcgagtgc cacaaagtcg tagacatcgg
      961 cttcgcggtc gcccacacta accaagtggg tgtggggaca acaatcgcga gccgtgatga
     1021 cggcgtcgag actatggagc cacttttggc tttctttctc actaataggc agctgtttgc
     1081 gtctggcccg tttgcccacg tcatgggggt cgcgagccca gacctgttgg gccaacagac
     1141 ccaacgggac ccgctccggt gtgatggcca aggtcgtgtg aaccagaaga ccttgacagg
     1201 tgctacagcc cagaggcccc aagccttcgg tggcccgcaa gctcgtccag tcggcctcgg
     1261 tcgtatcttg cacggctaat accacgggca cgtggtggag gcgaccatag gtggcttcaa
     1321 tatggctttg gacgatatcg gacggctcaa tgtcagcgtt atcaaagaaa cgataggcag
     1381 ctttgagcat ggcactgcta ccacaggctt cgggcagcgt ggcgccagga ttttgagcca
     1441 ggctatgggc cagttggacc aaacgctgag ttcgtcgcag gtcgccgaga tcggcgtcgg
     1501 caaattccgt gacggcccag ttggtaggat cggggaagtc gctcatgccc ggctccttga
     1561 acaacgggtt ggacttagag tgatgatgga gaacattctc cagaatatct caagtctctc
     1621 taaattaaaa aatgtgtccg actgtcaggg catagccagg ggcttacgct tagtaggtag
     1681 tcgtcatcca gcaaagctcc ggagctatca ttagatta
//
LOCUS       DASQSL010001521         1720 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_147921, whole genome shotgun sequence.
ACCESSION   DASQSL010001521 DASQSL010000000
VERSION     DASQSL010001521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147921"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            152..1588
                     /locus_tag="VE844_15505"
     CDS             152..1588
                     /locus_tag="VE844_15505"
                     /inference="COORDINATES: protein motif:HMM:NF033517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HZC02702.1"
                     /translation="MDTPEDIASLSWEELLALVAEQQQQITQLQGQLAKATATIESLQ
                     VEVERLTREKKRQATPFSKGTRVSKPKRPGRQPGEGTFSFRQAPRPEEITEPPMNVPV
                     TLESCPACGGKLAEKRVDFAYITDLPLLPQPKVTQYRVWVCQCTECGRKVRGEHPDLA
                     PAQYGATAHRLGPRAMAAAHALHYQVGIPVRKVPLVLNTLTGLVLTQGAITQDALRRS
                     RGRVGQVYQALRTGVRDSPVVYTDDTGWKVAGEQAHLMAFDTNQATVYQVRPRHRPQE
                     VQEVVPRNYQGVMGTDRGRSYEDQSFRWVKQRKCLAHLQRTLGEVLDRKKGRARELAE
                     RARELLRLAVRLWEEYHWGSRGEFDRWVPEVRLALSYHLRDRPLKDQDNQKLLRMLRC
                     YHQRGDLLRFLEEPEVEPTNNRVERMLRPAVIARKVSQCSKTWPGAYAFTAFTSIIQT
                     LLKGGTPSSVVEALADLFHASRSQTAPT"
BASE COUNT          369 a          526 c          497 g          328 t
ORIGIN      
        1 gctggaataa tctcagaaag ccacaagaaa ccgaataagg ccccgatagt tattagcaat
       61 atactagcga attttatttt cctattgact gctggtacct gattagcgct tgggcttgct
      121 gtcactgctc tgatgtttta cattgccact catggacact cccgaagaca tcgcctcttt
      181 gagttgggaa gaacttctag ccttggtggc tgagcagcaa cagcagatta cccagctgca
      241 gggtcagctt gctaaggcaa ctgcaaccat cgagtccctg caggttgaag tggagcgtct
      301 cacccgggaa aagaagcgac aggccacacc cttttctaaa ggtaccagag tgagtaagcc
      361 caagcgtccg ggccgccagc ctggggaggg caccttctcc ttccgccagg caccacgccc
      421 tgaggaaatc accgaacctc caatgaacgt accagtgacc ctggagtcct gccctgcctg
      481 tgggggcaag ctggctgaga agcgggtgga ttttgcctac atcaccgacc tgccgctgct
      541 gccccagccc aaagtaaccc agtaccgggt gtgggtctgc cagtgcaccg agtgtggccg
      601 caaagttcgc ggagaacatc ccgatctggc cccagctcag tacggagcta ccgcccatcg
      661 gttggggccg cgggctatgg ccgccgccca tgccttgcat taccaggtgg ggattccggt
      721 acgtaaagtg cccctagtcc tgaacactct caccggactg gtcctgaccc aaggggccat
      781 tacccaagat gcgctgcgcc ggtccagggg cagggtaggt caggtctacc aagcattgcg
      841 gactggggtt cgggattctc cagtggtcta caccgatgac accggctgga aggtggctgg
      901 ggagcaggcc cacctgatgg cctttgacac caaccaggcc acggtctatc aggtgcggcc
      961 caggcaccgc ccccaggagg tccaagaggt agtccccagg aattaccaag gggtgatggg
     1021 gacggaccga ggccgcagct acgaagacca atccttccgc tgggtgaagc agcgcaagtg
     1081 tctagcccat ctacagcgga ccctgggcga ggtgctggac cggaagaaag ggcgagcccg
     1141 agagttggca gagagggccc gggaactgct gcggctggcg gtgcggctgt gggaagagta
     1201 ccactggggt tccagaggag agttcgaccg gtgggtgccg gaggtgcgct tggcgctcag
     1261 ctaccacctg cgggatcgac ccctgaagga tcaggacaac cagaaattgc tgcggatgtt
     1321 gcgctgctac caccagcggg gagacctgct gcgtttcctg gaggaaccag aagtggaacc
     1381 caccaacaac cgggtggagc ggatgctgcg gccagcggta attgcccgca aggtctccca
     1441 atgttccaag acctggccgg gggcctatgc cttcaccgcc ttcaccagca tcatccagac
     1501 cctcttgaag ggtggcactc catcctccgt ggtagaagcc ctggccgacc ttttccacgc
     1561 ctcaagaagt cagaccgctc ccacttgatc tcccaaaacc ccagcgctat tcaattaccg
     1621 ctaatgcttc acggtcgtcc tcacagattc ttccaaaagc actgagcaac cacgctcgtg
     1681 tccaagccac ctccgtgtca ttttcttctt cctctctccc
//
LOCUS       DASQSL010001522         1179 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_190217, whole genome shotgun sequence.
ACCESSION   DASQSL010001522 DASQSL010000000
VERSION     DASQSL010001522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190217"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1179)
                     /locus_tag="VE844_15510"
     CDS             complement(<1..>1179)
                     /locus_tag="VE844_15510"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HZC02703.1"
                     /translation="SPSTVRKVLIAACAASSIEWYDFFIYLTAAALVFPAIFFPADID
                     PVAGVLASFSTAAVGFFARPVGGVLFGHFGDRLGRKRTLVIALLLMGVATTLIGLLPT
                     YASIGIWAAVALFVLRICQGLAVGGQWGGVVLLATEYAPPSKRGFYGSFAQLGVPIGV
                     VLGNVSFLVLAAILSTDAFNAWGWRVPFLASIILIALAMYIQLKLEETPAFRRLEQVS
                     QERQEEGGDEEPERSPMLEVIREHPKQILLAAGAFFVVNGSFYIMITGVLDYGTRDLG
                     LTRSSMLTAVLISSLFQILFLPAFSLLSDRLGRRPVYLAGAVLLGVWAFPMFWLMDTA
                     SIVLITVALVVGQMFLSMMYGPQAALFSEMFSRKVRYSGASLGYQIAAVFAGGLAPII
                     "
BASE COUNT          303 a          364 c          321 g          191 t
ORIGIN      
        1 tgatgatcgg cgcgagcccg cccgcgaaga ccgccgcaat ctggtaaccc aaagaggctc
       61 cggaataccg caccttccga ctgaacatct ccgagaagag cgccgcctgt ggtccgtaca
      121 tcatgctcaa gaacatctgc ccgacaacga gcgccacggt aatcagtacg atactagccg
      181 tatccataag ccagaacata gggaaggccc acacccccaa cagtaccgct ccggccaagt
      241 aaacgggacg tcgtcccaag cgatccgaga gcagggagaa ggccggcaag aacaagatct
      301 ggaagaggct ggagattaag acggcagtta gcatactgct tcttgtgaga ccaagatctc
      361 tcgtaccgta gtccagcaca ccggtaatca tgatgtagaa agagccgttg acgacgaaga
      421 acgcccctgc agcgagcagt atctgcttgg gatgctctcg gatcacctcc aacatgggag
      481 agcgctccgg ttcttcatcg ccaccctctt cttgcctctc ctgcgacacc tgctcgagcc
      541 gccgaaacgc cggtgtttct tcgagcttga gttgtatgta catcgccaga gcgatgagga
      601 tgatgctcgc taggaacggg acgcgccaac cccacgcgtt aaacgcgtcc gtggacagga
      661 tcgccgcaag cacgaggaaa gacacgttcc cgagcacgac cccgattggg acgcctagct
      721 gggcgaagct gccgtagaat ccccgcttgc ttgggggagc gtactccgtc gctagaagaa
      781 ccacaccacc ccactgcccg cctacggcga gaccctgaca gatgcgcaac acaaacagcg
      841 ccaccgcagc ccagataccg atgctagcgt aggtcggcag aagacctata agcgtcgtcg
      901 ccacgcccat cagtaacagc gcaattacca gagttctctt gcgaccgagc ctatctccaa
      961 agtggccgaa aagcacgccg cccactggac gggcaaagaa gccaactgcc gccgtgctga
     1021 acgaggccag taccccggct actgggtcaa tgtccgccgg gaaaaagata gcggggaaga
     1081 ctagagccgc tgcagtaagg tagatgaaga aatcgtacca ctcgatagaa ctggccgcgc
     1141 aagctgctat gagcaccttt cttacagtgg aaggactta
//
LOCUS       DASQSL010001523         3213 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_147933, whole genome shotgun sequence.
ACCESSION   DASQSL010001523 DASQSL010000000
VERSION     DASQSL010001523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3213
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147933"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(145..888)
                     /locus_tag="VE844_15515"
     CDS             complement(145..888)
                     /locus_tag="VE844_15515"
                     /EC_number="2.4.2.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013221498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5'-thioinosine phosphorylase"
                     /protein_id="HZC02704.1"
                     /translation="MTKVAIIGGTGLRTLSGLAITRRLVKQTPYGEPSGPFIYGMYCD
                     KEVVFLARHGIAHAIPPHRVNYRANLWALKNLGVTRIISIAAVGGITAGMSPSRIAFP
                     DQIIDYTWSRDHTFFEEDLDHVIHIDFTRPYCEALRRILVQAADKAGIQAINSGTYGA
                     TQGPRLETAAEINRLERDGCTMVGMTGMPETALARELELGYATCAVVANWAAGRGGEE
                     PITMPIIVKNLTKGMEQVRKLLEYAIPML"
     gene            complement(885..1436)
                     /locus_tag="VE844_15520"
     CDS             complement(885..1436)
                     /locus_tag="VE844_15520"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013221499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine-guanine phosphoribosyltransferase"
                     /protein_id="HZC02705.1"
                     /translation="MSSVLDEAVTVRARAERLFSRAEVDTALDRMALTINARLADRNP
                     LLLAVMIGGVVPMGLLVPRLTFPLQLDYLHVTRYRGATSGSALRWIKHPDISLHGRVV
                     LVVDDVLDEGLTLAAIVEACTMRGASEVLTAVLVEKRLENREGLARANFTGLCADNRY
                     LFGYGMDYKLYLRNADGIFAVSP"
     gene            complement(1436..2314)
                     /locus_tag="VE844_15525"
     CDS             complement(1436..2314)
                     /locus_tag="VE844_15525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004326477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZC02706.1"
                     /translation="MSELETVLARAEALLLRIERLLPGDSGEPRWDHAYAFRWRSQGY
                     RGYLQSVRCLSSVRLEDLQCIDAQKQQVDRNTRQFMARLPANNVLLWGPRGTGKSSLI
                     KALLNQYAGEGLRLVEVDQPHLMALPDIVECLYRRPERFILFCDDLSFAANDASYKIL
                     KAALDGSVHSLPDNVLVYATSNRRHLMPEELRENLETPTLGGEIHPAEASEEKISLSE
                     RFGLWLAFHPFSQEDYLKIVYYWLNRLAVPLEDSASIRREALQWALLHGSRSGRSAWQ
                     FARDLAGRVGLERMAR"
     gene            2401..>3213
                     /locus_tag="VE844_15530"
     CDS             2401..>3213
                     /locus_tag="VE844_15530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetoin utilization protein AcuC"
                     /protein_id="HZC02707.1"
                     /translation="MTKDCPVCVYVGADLGRYGFGGGHPLNPERLEAFWQGFKAAGLE
                     PAVTVCAPVQAERTAIERFHVPAYIERVIRQSKTGEGYLDYGDTPAFPGVYEAAATVV
                     GSTLDALDRLMHGRCRRAFVPIGGLHHARRDSAAGFCVFNDCGVAIETLKSIYHQTHI
                     AYVDIDAHHGDGVFYGFEDDPTVIVADIHEDGRFLYPGTGAAHETGKGLALGTKLNIP
                     LLPHSDDKDFRQAWSRVEDFLIHAKPSFILFQCGADNLADDPLTHLGYSLKAH"
BASE COUNT          711 a          961 c          882 g          659 t
ORIGIN      
        1 agggttgcgc acgcctgtag tccggccgca gctataacca aaggaatcaa gcgggaagct
       61 ctgccggtca tgggctgcca tcccctcctt tctctccctt ccagggaaag gggtggaggt
      121 tagccctgct cttcgtagaa cgatctagag cataggtata gcgtactcga gtaacttccg
      181 tacttgctcc atgcccttcg ttaaattttt gacaatgata ggcatggtga taggctcctc
      241 tcccccgcgt cctgcagccc aattggcgac caccgcgcag gtggcatagc cgagttccaa
      301 ttctcgggcg agagccgtct caggcatgcc ggtcatcccc accatggtgc aaccatcccg
      361 ttccaggcgg ttgatctcgg cggcggtctc aagccgcggc ccttgggtag cgccgtaggt
      421 tccagagttg atcgcctgga tcccggcctt atccgccgcc tggacaagga tccggcggag
      481 cgcttcacaa tagggacggg taaagtcgat gtggatcaca tgatccagat cctcttcaaa
      541 gaaggtatga tcccgtgacc acgtgtagtc gatgatctga tccggaaagg cgatacggct
      601 tggagacatc cctgcggtga tgccgccgac cgcggcaata ctgatgattc ttgtcacccc
      661 caggttttta agcgcccaca ggttagcgcg atagttgacc cgatgcggcg ggatcgcatg
      721 ggcgatgcca tgccgtgcca gaaagaccac ctccttatcg caatacatac catagatgaa
      781 gggcccggag ggttcaccgt agggcgtctg cttgacgagc ctacgggtga tcgcaaggcc
      841 acttagggtt ctaagcccgg taccaccaat gatcgcgacc tttgtcatgg acttaccgca
      901 aagatcccgt ctgcgttccg tagataaagc ttatagtcca taccataacc gaacagatag
      961 cgattatccg cacagagtcc ggtgaagttg gctcgggcca gcccttcccg gttttccaga
     1021 cgtttctcta ccagcaccgc ggtcagcacc tcgctcgccc cccgcatcgt gcaggcctcg
     1081 acaatcgcag ccagggtgag tccttcgtcc aacacatcat cgacgactaa gaccacccgg
     1141 ccatggaggg aaatgtcagg gtgcttgatc cagcgtaagg cactaccgga ggtagccccc
     1201 cggtagcggg tcacatgtaa ataatcaagc tgcaagggaa aggtcaaacg gggcactaac
     1261 aggcccatcg gcaccacacc cccgatcatg acggccagga gcaagggatt gcgatccgcc
     1321 aagcgcgcat tgatcgttag cgccatgcga tccaaggccg tatcaacctc agctcgcgaa
     1381 aacagccgct cggccctggc ccgtaccgtc actgcctcat ccagcacgct gctcatcacc
     1441 ttgccatcct ctcaagtccc actcttccgg cgagatcccg cgcaaactgc caggccgaac
     1501 ggccgctccg ggaaccgtgc agcaaggccc attgcaaagc ctcccgccgg atcgatgcgc
     1561 tgtcctccaa cggcacagcg agcctattaa gccagtaata cacgatcttg agataatcct
     1621 cctgggaaaa aggatgaaac gccagccaca acccaaaccg ctccgacagc gagatcttct
     1681 cttcgctagc ctcagcggga tggatctcgc cgcctaaggt aggggtttca agattctccc
     1741 tgagctcttc aggcatcaga tgacgccggt tagaggtggc atagacgagc acgttatcgg
     1801 gtaggctatg gacagagcca tcgagcgcag cctttaggat cttgtagctc gcatcattag
     1861 ctgcaaacga gagatcgtcg caaaacagga tgaatctctc tggacggcgg tagagacact
     1921 cgacgatatc cggcagcgcc ataaggtgag gctggtcgac ctcaacaagg cgcaagcctt
     1981 ctccagcata ctggttgagc agggccttga tcagcgaaga cttacccgtc ccccgtggcc
     2041 cccaaagcaa cacattgttg gccggcaagc gcgccataaa ttggcgcgta ttgcggtcaa
     2101 cctgctgttt ttgggcgtca atgcactgga gatcttcaag ccgcactgag gagaggcagc
     2161 gcacgctctg caaataaccg cggtaaccct gactgcgcca gcggaaggca taggcgtgat
     2221 cccatcgcgg ctcgccggag tcgcccggca gcaaccgctc gatccgtagc aataacgcct
     2281 cggcacgcgc aagcactgtt tctagctccg acatgttggt ggggcaagta gatagtctgg
     2341 ctggctttta gagattattc taaacttaga agattcaatt ttaacaggaa atacccaacc
     2401 gtgaccaaag actgtcctgt ttgcgtctat gtcggggccg atctgggccg ctatggtttt
     2461 ggcggcggtc atccgctcaa tccagagcgg ctagaggctt tctggcaagg atttaaggcc
     2521 gcaggtcttg agcccgcagt gaccgtgtgc gcccctgtcc aagccgagcg aacagccatc
     2581 gagcgatttc atgtccctgc ctatatcgag cgcgtgatcc ggcaatccaa aaccggtgaa
     2641 ggctatctcg attacggcga tacccccgcg tttcctgggg tatacgaagc cgcggcgaca
     2701 gtggttggga gtacgctcga tgcgctcgat cggctgatgc acggccgctg ccggcgagcg
     2761 ttcgtaccta tcggcggact gcatcacgca cgccgcgaca gcgcagcggg tttctgtgtc
     2821 ttcaacgact gtggcgtggc catcgaaacc ctcaagtcaa tttaccacca gactcacata
     2881 gcctatgtgg acatcgatgc gcatcatggc gatggggtgt tttacgggtt cgaagacgat
     2941 cccacggtga tcgttgccga tatccatgag gacggacggt ttctttaccc aggcacaggt
     3001 gcggcccacg agacaggcaa gggtctggcc ttggggacca aactcaatat tcctctcctg
     3061 cctcattcag atgacaagga tttcaggcag gcatggtctc gggtcgaaga ctttctgatc
     3121 catgccaaac caagctttat tctgtttcaa tgcggggccg acaacctcgc cgatgatccc
     3181 ttgacgcatc taggctattc attgaaagcg cat
//
LOCUS       DASQSL010001524         1089 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_198468, whole genome shotgun sequence.
ACCESSION   DASQSL010001524 DASQSL010000000
VERSION     DASQSL010001524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198468"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..879
                     /locus_tag="VE844_15535"
     CDS             <1..879
                     /locus_tag="VE844_15535"
                     /inference="COORDINATES: protein motif:HMM:NF014430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02708.1"
                     /translation="PADEHTQTFQFFVEHRRKLVHDKTRLTNRLTSVLKGYFPPVLCW
                     FAALDTPLVCDFLRRWPTLEAVQKADDATLRTFFQAHHSYHRAINQQRMDGIRQAIPA
                     TTDQAVIHSSVMLVHTLVEQVSCLTEALRRFEKEIDALTRSHVDFQLFASLPGAGPVH
                     ASRLISALGPDRSRYEHVEDLLTFTGIAPIMERSGKTTVTHFRWFCPTCLRQSFHEFA
                     GQSIQRSQWAKAFYRQQRMRGKDHQASVRSLAFKWTRIIFRLWKNRTPYNERIYVAAL
                     QRRGSPLWHVMAAQQA"
BASE COUNT          241 a          318 c          302 g          228 t
ORIGIN      
        1 ccggcggatg agcacaccca gacgttccaa ttcttcgtcg agcatcgccg gaaattggtc
       61 catgataaaa cccgcctgac gaaccggttg acgagcgtgc tcaaagggta tttcccgccc
      121 gtcttatgct ggttcgcagc cctcgacacg ccattagtct gtgacttcct caggcgctgg
      181 cccaccctgg aagcggtcca gaaggctgat gacgccacgt tgcggacgtt ctttcaggcg
      241 catcattcat accaccgcgc gatcaaccag cagcggatgg acgggatccg ccaggcgatc
      301 cccgccacca cggatcaagc ggtgatccac tcctcagtca tgctcgtgca cacgctcgtc
      361 gagcaagtca gctgtttgac tgaagcgctc cgtcggtttg agaaagaaat tgacgcactg
      421 acccgctcac acgtggattt tcagctgttt gcgtcgttgc cgggggcagg tcctgtccat
      481 gcctctcgcc tcatcagtgc gctgggcccg gatcggagtc ggtatgagca cgtcgaagat
      541 ttactgacct tcaccggcat cgccccgatc atggaacgga gtggcaaaac gacggtgaca
      601 cacttccggt ggttttgccc cacatgtctc cgccaatcgt tccatgagtt tgccgggcag
      661 tccatccaac gctcccagtg ggcgaaggcc ttttatcgcc aacagcgcat gcgaggcaag
      721 gatcaccaag cctccgtacg atccctggcc tttaaatgga cgagaattat cttccggttg
      781 tggaaaaatc ggacgccgta taacgagcga atctatgtcg ccgcgttaca gcgacgcggc
      841 tcgccactgt ggcacgtgat ggctgcgcag caggcataga tgcaaggctg tcaagaattt
      901 ctcgcttgcc gttgacgaga acagcgtgga tggctttacg ttggtgcgga ggtagttcga
      961 ccttgtttgg taaacatcaa tccgacgagc aaccatgccg cacagcggca ggaggaaact
     1021 gccaacgggg gctttgccca aaaagtccaa gctgagagca aaattgatag atttagagcg
     1081 ttaaacaca
//
LOCUS       DASQSL010001525         1472 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_160967, whole genome shotgun sequence.
ACCESSION   DASQSL010001525 DASQSL010000000
VERSION     DASQSL010001525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1472
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160967"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(55..726)
                     /locus_tag="VE844_15540"
     CDS             complement(55..726)
                     /locus_tag="VE844_15540"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02709.1"
                     /translation="MIEAIENQGKPWLADSEKTRLVFWQGQPFNCETFAQSRPDQAYR
                     PVTLNRHGQEKTFWVFTCVVRIKKYGKVRLAVIYDQPGRQGKPIYCFTRRLTWNAQKI
                     VQVRCHRWDIEPLHEQIKQFLGAEDSQLQTEAGVRRHLTRVFVVNSLLKSLDLSQPLG
                     DLPMTDFQNGSPTFGQRCRRILLEVFHDLIQTIARWLKENQMTPNQVFEILFNRLLYV
                     GVVAM"
     gene            complement(726..1352)
                     /locus_tag="VE844_15545"
     CDS             complement(726..1352)
                     /locus_tag="VE844_15545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02710.1"
                     /translation="MFPRIETYQHIKEYCTGLVVLEKPSINRLAACLIDGPAQSSINK
                     ALTRSPWSGDAVNERRLERIKPSHRGKGLTIGIIDSTFSHHPRGEKKIYGVYRYWDYV
                     NGCYPYAMQLVTAAIATGERCDGFDYRIYHRFHQQAELAYLEHSRPPPDEPDRGKWLQ
                     RLIELLTYELHRRQHQTKPQLATALIEQMAVSEVAPDVTRSIAAYLRR"
BASE COUNT          313 a          437 c          381 g          341 t
ORIGIN      
        1 gagaatagcg tattaaccgt tgcaccgccc gaggcgtttg ggttcacgac tttttcacat
       61 agcaacaact ccaacgtaga gtaggcggtt gaaaaggatt tcaaagacct ggttcggcgt
      121 catctggttt tccttcagcc accgggcaat ggtttgaatg agatcatgga acacctctaa
      181 caggatgcgg cgacaacgtt gaccaaacgt gggcgacccg ttttggaagt cggtcattgg
      241 cagatccccg aggggttgac tcaggtccaa ggatttcaga agtgaattca ccacaaacac
      301 ccgcgtcagg tgccgccgga cgccagcttc ggtttgcagt tgactgtctt ccgctcccag
      361 gaactgtttg atctgctcat gcaacggttc aatgtcccaa cgatgacagc gcacctggac
      421 gatcttctgg gcattccagg ttaacctccg ggtaaaacaa taaatcggtt tgccctggcg
      481 acccggctgg tcgtagatga ccgccagccg gaccttgccg tatttcttga tgcgcacgac
      541 acaggtaaag acccagaacg tcttctcctg accatggcgg ttgagcgtca ctggacgata
      601 cgcctgatcg ggccgagatt gggcgaacgt ttcacagttg aagggctgcc cctgccaaaa
      661 taccaaccgc gtcttctcgc tatcggctag ccacggcttg ccttggttct cgatagcctc
      721 aatcatcacc ggcgcaaata agccgctatc gaccgtgtaa cgtctggggc cacttcggag
      781 acggccatct gctcaatcaa tgccgtcgcc agttgcggct tcgtttgatg ttgtcgccga
      841 tgcagctcat aggtcagcag ctcgatcaac cgttgtagcc attttcctcg gtcgggctca
      901 tccggcggcg gccggctgtg ctccaaatag gccaactccg cttgctggtg aaaccgatgg
      961 tagatccgat aatcaaaccc atcacagcgc tcccccgtgg cgatggccgc cgtcactaac
     1021 tgcatcgcat aggggtaaca cccattgacg taatcccagt accgatagac cccatagatc
     1081 ttcttctccc ctcggggatg atgactgaag gtactgtcga taatcccgat ggtcagcccc
     1141 tttccccggt gggatggctt gattctctcc aaccgccgct cattgacggc gtctcccgac
     1201 cacggcgacc gtgtcagcgc cttgttgatc gagctttggg cgggtccatc gatcaaacac
     1261 gctgccagtc ggttgatact cggtttctcc agcaccacca acccagtgca gtattccttg
     1321 atgtgttggt acgtctctat ccggggaaac aaatctcggt acggggccag cccgagctag
     1381 atgctgggta ggatcgctac gatgggcaca atcatctcct tcctctccgt ctctcactgg
     1441 aatcaaacct catcataggc actcacggct at
//
LOCUS       DASQSL010001526         2589 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_190221, whole genome shotgun sequence.
ACCESSION   DASQSL010001526 DASQSL010000000
VERSION     DASQSL010001526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2589
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190221"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(312..1452)
                     /locus_tag="VE844_15550"
                     /pseudo
     CDS             complement(312..1452)
                     /locus_tag="VE844_15550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611616.1"
                     /note="programmed frameshift; internal stop; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            complement(1594..2040)
                     /gene="aroQ"
                     /locus_tag="VE844_15555"
     CDS             complement(1594..2040)
                     /gene="aroQ"
                     /locus_tag="VE844_15555"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015151236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HZC02711.1"
                     /translation="MPRILVLHGPNLNLLGRREPQIYGHVTLEEINHRLQQYAAEHHV
                     DLEILQSNHEGVLVDAIQGAMGRIDALIINAGAYTHTSAALRDAIAAVDIPTIEVHLS
                     NLARREAFRHRSYLTEVAVGQIMGFGADSYILGLHAAILHLSPNTT"
     gene            complement(2189..>2589)
                     /locus_tag="VE844_15560"
     CDS             complement(2189..>2589)
                     /locus_tag="VE844_15560"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013112367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070497 -
                     6-carboxy-5,6,7,8-tetrahydropterin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HZC02712.1"
                     /translation="VTKELHFCYGHRLMQYQGKCRVPHGHNATVAIDLQADSLDPLGM
                     VVDFTDITRVVQGWIDSNLDHRMLLRQDDPLAKWLQEAGEPCFIMDRNPTAEMLALLI
                     FEYAVAQGFPVVEVRLWETPDAYATYRARP"
BASE COUNT          549 a          752 c          735 g          553 t
ORIGIN      
        1 ccttttccca cgaccccttc tcctcgcatc aacatgcctc catacgagag ataaggggct
       61 gtcacaagga actttccaaa gaaagggctc tgaatgagga acagtggtaa cacgccttct
      121 atcgattgtc catctatggc catcaagtaa tagagagtat ggtgataagt cttctgcacg
      181 acatttcgcc aaccgaggag atgtccgaga atggcctgca gtgaatcgtc aaggaatcgc
      241 tcccatgcct tctcctactc aggagtaagc aaggaggtgt accctaaatt caagaccaac
      301 agtcgacgtg tttaaggtgg aaacctgctc tccctcgcct tggccagttg ccgatggacg
      361 gcctccggcg tttgatagtt gagcgcttga tgcaggcgct cgctattgta gaaggcgaaa
      421 tacctcccca gactgcggat agcctccgga acgctccggt aatcgtggag agagacctcc
      481 tcgtacttga gggtccgcca caagcgctcg acgaagatgt tgtccaacgc ccgcccccgc
      541 ccatccatac tgatccggat cccacggacc ttgagccgct cggtaaaagc cgcgctggtg
      601 aattgcacac cctgatcgga ggtgaaaatc tccggctggc cgtgcgcgag tgctcgttcc
      661 agggcgctga tgcaacactc gtgatccagg gtgactgaga tctcccaagc gagcacatag
      721 cgcgacaacc agtcgaggat ggccacccaa tagacaaacc cgtggagtag gcgaatgtag
      781 gtgatgtccg tactccacac ctgattgacg cgctcaatgt tcaccccgcg cagcaggtag
      841 ggctagatct gctgcccagc cccaagccga ctcaggtgtg gcttgggata gatcgcttcc
      901 aggcccatgc gccgcagccg ccgttggacg cgtgtgtgat taacttggta gccctgggtc
      961 cgcagccacg ccgccatccg ccggataccg tagtacggcg tgcgcgtgta ttgttcgtcc
     1021 agcaggcgca tcaaccgcag gttgtctgtc gactccgggc gtggctcgta gtccagcgca
     1081 gcgcgtgacc accccaacag ctcacactgc cggcgcactg agatatgcgg atgccaaggc
     1141 tcaaccatct gacgcttgcg atcacccgag caatccagct ttgtttttga gccagtcgag
     1201 ttcgaccttc agcggcccga tctgctggta cagttgggct ttcagggtgt cctcatcctg
     1261 agcgaggcgg gcgcggcgct ccgagaagac atggggcagt tccgccagcg cctgtttctt
     1321 ccactgcgtc acttgattgg gatgcacccc gtcatgggca gcgatttcgt tgatggtccg
     1381 ctgcgctttg atggcctcca gggcaacccg cgctttcagt tcggcgctct aggtctttcg
     1441 ctgctttggc atgagctcac ctcacgggac agcagcgatt gtacaccttg aacactggct
     1501 caaatttcgg ggtacattat agtcatcttt gtccgcattt cctcctacta gcagcagtgt
     1561 catcagctgt tgacgcagat caccgacaac tgttcaagtg gtattggggg agaggtggag
     1621 aatggcagca tgaaggccca ggatataact atcggcacca aagcccataa tttgacccac
     1681 agccacctca gtaaggtagg aacggtgacg gaatgcctcg cggcgggcga ggttggaaag
     1741 atggacttcg attgtaggaa tatcgacggc ggcgatggca tcacggagcg ctgcactggt
     1801 gtgggtatac gcccccgcgt tgatgatcaa cgcatcgatt cgtcccatcg ccccttgaat
     1861 ggcatcgaca agcacccctt catggtttga ttggaggatc tcgaggtcaa cgtggtgttc
     1921 ggccgcgtat tgctgcagcc ggtggttgat ttcttcgaga gtgacgtgtc catagatttg
     1981 cggttcccgg cggcccaaca ggttaaggtt tgggccgtgg agcaccagaa tgcgcggcat
     2041 tagcggcttc cttcccggta cgacgaagcc gttgcagcca atcgcagaac agccgtgcgg
     2101 catgacaccg gcgagacatc tagacgcata ggctctctcc aagacgaccc acatcatatc
     2161 cggttagacg cagcggggca agatctcgct atggtcgcgc tcggtaggtc gcataggcat
     2221 ccggggtctc ccataagcgc acctccacaa ccggaaagcc ttgagctacc gcatattcga
     2281 agatgagcag ggcgagcatc tccgccgtcg ggttacggtc catgataaag cagggttctc
     2341 ccgcttcctg cagccacttg gccaggggat catcttggcg caggagcatc cgatggtcca
     2401 ggttactgtc gatccagccc tgtacgaccc gtgtgatatc ggtgaaatcc acgaccattc
     2461 ccaacggatc gagggagtcc gcctggagat cgatggcgac agtcgcatta tgcccgtggg
     2521 gcacacggca tttcccctga tactgcatca accggtgacc gtagcagaag tgcaattctt
     2581 tggtaactt
//
LOCUS       DASQSL010001527         1675 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_160973, whole genome shotgun sequence.
ACCESSION   DASQSL010001527 DASQSL010000000
VERSION     DASQSL010001527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1675)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1675)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1675
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160973"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(116..880)
                     /gene="pssA"
                     /locus_tag="VE844_15565"
     CDS             complement(116..880)
                     /gene="pssA"
                     /locus_tag="VE844_15565"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015281221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003882 - CDP-diacylglycerol-serine
                     O-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HZC02713.1"
                     /translation="MKKPVKPIRRRGLYLLPNLFTTAALFAGFYAIVAAINGRYQSAA
                     ISIFVAMLLDGMDGRIARLTHTQSDFGAEYDSLSDMVSFGVAPALVAYQWSLVAWGKL
                     GWLAAFLYTSAAALRLARFNTQIGTADKRFFQGLASPSAAALLAGLVWLCDDHDLTHG
                     AVLAPLIFLLTVSAALLMVSNVRYYSFKGLDFKGRVPFVRGLMVVFAFVFISLYPSGV
                     LFGGFLLYALSGPVLTLIQLRRHRAARRVSEHTGER"
     gene            complement(955..>1675)
                     /gene="ilvC"
                     /locus_tag="VE844_15570"
     CDS             complement(955..>1675)
                     /gene="ilvC"
                     /locus_tag="VE844_15570"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012638714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HZC02714.1"
                     /translation="GAVLAFAHGFNIHFRQIEPREDLDVIMIAPKGPGHLVRSTYTQG
                     GGVPCLIAIHQDASGQAKELALSYACAIGGGRAGIIETSFREETETDLFGEQTVLCGG
                     ITALIQAGFETLIEAGYAPEMAYFECLHETKLIVDLIYEGGLANMRYSISNTAEYGDF
                     TRGPRVIGEASRQAMKEILAEIQSGRFAREFILENQSGAPVLKAMRRTSREHPIEQVG
                     AKLREMMPWIKANKLVDRSRN"
BASE COUNT          384 a          515 c          462 g          314 t
ORIGIN      
        1 tttcgaagcc cagggactga gcgccctggc atggccgatc cgctaccggg tactgatccg
       61 tgaggggtat tgcgtgacac ccagggccag tgggtgcact cgcacgtagg actctctacc
      121 gctcccccgt atgctcagat acacgcctcg ccgcacgatg ccggcgcagt tggatcaggg
      181 tcaacacggg tccggagagg gcatacagca aaaagccacc gaacagcacc ccagaaggat
      241 aaagggatat aaacacaaac gcgaacacca ccatcaatcc cctcacaaac gggaccctgc
      301 ctttgaaatc caagcccttg aagctgtagt aacggacgtt gcttaccatc agcaaggcgg
      361 cagacacagt caaaaggaag atcaagggtg ccaggaccgc gccatgggtc aggtcatggt
      421 cgtcgcaaag ccacaccagc cccgccaaca gcgccgcggc cgaaggactc gccagccctt
      481 gaaaaaagcg tttgtcagcc gtcccgatct gggtattgaa acgcgccagg cgcagtgcag
      541 ctgccgaggt atagagaaag gccgcgagcc aaccgagctt cccccaggcc accaacgacc
      601 attggtaggc taccaaggct ggcgcgacgc caaaagaaac catatccgag aggctatcgt
      661 attcggcgcc gaaatcgctc tgagtatggg tcaagcgcgc gatacggcca tccatgccat
      721 cgaggagcat cgccacaaag atggatatgg cagcactttg gtagcggcca ttgatcgcgg
      781 cgacgatcgc gtagaagcct gcaaacagcg ccgcggtggt gaagagattg ggcagcaggt
      841 ataaacccct gcgccgtatg ggtttaaccg gttttttaat cgcttgatta tcgctagtgt
      901 cgatcgccgg ggagagggtt agtttatgga tcttgcgctt ttccacaagc aactctaatt
      961 cctcgatcga tccaccagtt tgttggcttt gatccagggc atcatctcgc ggagctttgc
     1021 acccacttgc tctatcgggt gctcccggct ggtcctgcgc atcgccttga gcaccggcgc
     1081 accactttga ttttccagaa taaattcgcg ggcgaaccgg ccgctttgga tctcggccag
     1141 gatctccttc atcgcctggc gcgatgcctc cccaatcacc cgcggacccc gggtaaaatc
     1201 cccatattcc gcggtattgg agatcgaata gcgcatattc gcaaggcccc cctcatagat
     1261 cagatccacg atcaacttgg tctcatgcag acattcaaaa taagccatct ccggggcata
     1321 accggcttcg atcaaggttt caaagccggc ctggatcagc gcggtaatgc cgccgcacag
     1381 gaccgtctgt tccccaaaca gatcggtctc ggtctcctcc cggaagctgg tctcgatgat
     1441 ccccgcccgg ccaccgccga tggcgcaggc ataggacaga gcgagttcct tcgcctgccc
     1501 agaggcgtct tggtggatgg cgatcaggca cggcaccccg cccccttgcg tgtaggtaga
     1561 acggaccaaa tggcccggcc ccttgggcgc gatcatgatg acatcgaggt cctcgcgcgg
     1621 ttcgatctga cggaaatgga tattaaatcc atgcgcaaag gccaagactg cccct
//
LOCUS       DASQSL010001528         1270 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_198477, whole genome shotgun sequence.
ACCESSION   DASQSL010001528 DASQSL010000000
VERSION     DASQSL010001528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1270
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198477"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..762)
                     /locus_tag="VE844_15575"
     CDS             complement(<1..762)
                     /locus_tag="VE844_15575"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HZC02715.1"
                     /translation="MTNTRDTTVRKRAEEQIRFQRRLLDAVGQAIIATDLQGKIIYWN
                     QAAEELYGWTTEEVMGHPIVQITPSEELLERAEEIMVELRAGRSWTGEFVVRRKDGST
                     FPAMVTDSPVYDEQGTLVSIIGVSTDLTELKKAEEMRRSEERFRLLAENAQDLIYRYC
                     LKPTPGFEYVSPSATAIIGYTPEEHYADPQLLYKIVYPGDRHLIDEVFRSPQALTTIR
                     WLRRDGVVILIEQRIKAIYDGMGELIAIEGIARDVT"
BASE COUNT          263 a          363 c          342 g          302 t
ORIGIN      
        1 ggtgacgtct cgggcgatgc cctcgatcgc aatcaactct cccatcccat cgtagatcgc
       61 tttgatacgc tgctcgatta agatcaccac gccatccctg cgaagccacc ggatggtggt
      121 gagagcttgc ggggagcgga atacctcgtc gatgaggtgc ctatcgccgg ggtaaacaat
      181 cttgtacagc agctgggggt cggcgtagtg ctcctcgggc gtgtagccga ttatggcggt
      241 ggccgaaggg ctaacgtact cgaagccggg cgtaggcttt agacagtagc ggtagatgag
      301 gtcctgagca ttctcggcca agagcctaaa gcgttcctca ctacgacgca tctcctccgc
      361 tttcttgagt tcggtgagat ccgtggaaac gccgatgatg cttaccaggg ttccctgttc
      421 atcatagaca ggagagtcgg ttaccattgc gggaaaggtg ctgccatcct tacgccgcac
      481 cacaaactca cctgtccagc tcctcccggc cctaagctcg accatgatct cctcggctcg
      541 ctccagcaac tcctccgatg gcgtgatctg tacaatcggg tggcccatca cctcttctgt
      601 cgtccagccg tagagctcct ctgcggcctg attccagtag atgatcttcc cctgcaaatc
      661 ggtggcgatg atggcttggc cgacagcatc gagcagtcgt ctctggaagc ggatctgctc
      721 ctcagctctc ttgcgcacgg tagtgtctct ggtgttggtc acttagcgtc tacctcttcg
      781 gcatcgaaga tgggttgcga gcgctcggca ttcatgaata tataattgta gtgatctcac
      841 catgtatccg ctagccgagc gagctacaag agagtattca acatcctgac accctcggtg
      901 cccgaatagg aggtcaaggt agggagcccc tccaccgctg ggatgtttag agaggctctc
      961 cggccgatgc ttctggctct gtgcttcgcc acgttgctta cggcctccac ggagctcggg
     1021 acgaaccagt ggttgccgaa tatcctcacc acgacggccg ccgtatcggg catactggtg
     1081 ctggcctaga taaacggcct gatggccatc gggcgttttc tcaagcttgt cagcccactt
     1141 caacatgtac cggtgctcca cggggcttta agagttatta aaaattcaga tatagtcttg
     1201 acaacgttcg acgtgggcaa ttacattgta tagctacaaa agtatcatac atactatcaa
     1261 ccaggtacat
//
LOCUS       DASQSL010001529         1025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_105496, whole genome shotgun sequence.
ACCESSION   DASQSL010001529 DASQSL010000000
VERSION     DASQSL010001529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105496"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(256..531)
                     /locus_tag="VE844_15580"
     CDS             complement(256..531)
                     /locus_tag="VE844_15580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02716.1"
                     /translation="MAIGFIFNNPGQTQEQYDASVEQLNLAENLPEGWIFHAAGPTED
                     GWRVVEVWESQEAADAYFQGRLGQVLRNVGVTPGQPDTFTVHNVIAR"
BASE COUNT          203 a          310 c          274 g          238 t
ORIGIN      
        1 ggggccttcc ccggcctttt tgacactctc ccccggtcct aatgccctac gccctctccc
       61 ggcttatccc catcttgtcg ggcacataat acccggtagt cagcatggcg cctccggcac
      121 gccctggccg ctccggaccg cggctatgcg ctattcagcg aacttcgcct gttcagagtt
      181 ctcggaagtt cgtgccaagc tggagccggc ggcatcatgc ttgtggtgac cgacaaaaag
      241 agtgttcccg gaagctcagc gggcaataac gttgtgcacc gtaaaggtgt cgggttgacc
      301 cggcgtcaca cctacgtttc gtaggacttg cccaagcctc ccctggaagt aggcatcagc
      361 agcctcctgc gactcccaca cttccaccac ccgccagcca tcttctgttg gtccagcagc
      421 atggaatatc catccctctg gcaggttttc tgctaggttc aattgctcca ctgacgcgtc
      481 gtattgctcc tgggtctggc caggattgtt gaatataaac ccgatagcca ttggtggtcc
      541 tcctttccca aagcgacgac acatttgtca cctgtagccg aagttttgaa acttattgcg
      601 ttattcaccc aagtacctag aagtggaatt ctgagatccc accagcggat cctgaactac
      661 tctattgttg tagcaggcgg aagggccggg gtgagatgcc ccggcccttc ctctttccct
      721 tattcaccca acgtcgggga agaggagttc cccgacgttg cgctcctact tgtaccgtgt
      781 aacctgtcta actagtccag ttacgtagag cggtgaggct gaagaggctg cccttgtgga
      841 gaggaggcac tcatatatgc cactgtcgct agaggatgag gtaagactgc tctccatggt
      901 cgacgtcttc gagtcgctcc tgcgcgatga gttggaggag ctggctcacc gagcccacga
      961 tacccacctc gagcgagggg acgtgcttgg caggccccaa gaagaaggtg acgaagagct
     1021 ttacg
//
LOCUS       DASQSL010001530         1681 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_13535, whole genome shotgun sequence.
ACCESSION   DASQSL010001530 DASQSL010000000
VERSION     DASQSL010001530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1681
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13535"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            163..540
                     /locus_tag="VE844_15585"
     CDS             163..540
                     /locus_tag="VE844_15585"
                     /inference="COORDINATES: protein motif:HMM:NF013842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 transposase-related protein"
                     /protein_id="HZC02717.1"
                     /translation="MNAYSEDLRKKIVEAVERGMPKIEAARTFGVGISSVKRYVATAR
                     QGRSLAPKKRPGSKPKLDESARMLLEADLQERPAATLPQRREFLRRVRGVEVSDSTVS
                     RVLKRMGWTRKKDRWVRARETSS"
     gene            489..1109
                     /locus_tag="VE844_15590"
     CDS             489..1109
                     /locus_tag="VE844_15590"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC02718.1"
                     /translation="MDSKKRSVGASERDEFLRAAWRVMVAGEMRTERLVFVDECSTNT
                     SLAPLYAWSPKGERALCSVPRNWGANITLVASMSMGGMGRCLAVEGPTTREVFETYLE
                     RVLAPSLRPGQVVVMDNLSSHKGGRVKELIEERGCELLYLPPYSPDLNPIEEAFAKIK
                     ALLRKAGARTREALIEAMGRALEAVTVKDAHGFFEHRGYRATAQLL"
     gene            1381..>1681
                     /locus_tag="VE844_15595"
     CDS             1381..>1681
                     /locus_tag="VE844_15595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02719.1"
                     /translation="MEKKLEAYEHYQAYPGVNLLEERDRQRQQLGRKLHELDQKLEAS
                     EGYRIYTKMKLLGKSYFLFDGNYLALKHVLEDFEHPATFLKLWEKADRHRLDLFMS"
BASE COUNT          398 a          424 c          552 g          307 t
ORIGIN      
        1 gggaggcacc acatcggcca gatggcgtat ttttggtgct acttggtcgc tacgagagcg
       61 ttgctagtgg gcaaacttct gagaattccg tacttctaga aactgtttgg aaaatcctag
      121 agcctcttgc aacgcagctg ggctgtccgg catcatgaga agatgaatgc gtactcagaa
      181 gatttgcgca agaagatcgt cgaagctgtg gagaggggga tgcccaagat cgaggccgcc
      241 cgtaccttcg gtgtgggtat ctcctcggtc aaacgctacg tagccacagc acgccaagga
      301 aggtcgctgg ccccgaagaa gcgtcccggc tccaagccca agctggacga gagcgcaagg
      361 atgctcttgg aggccgatct ccaggagcgt ccggcggcga ccttgccaca gaggcgcgaa
      421 ttcttgcggc gggtgcgcgg agtggaggtc agcgactcca cggtttccag ggtcctcaag
      481 cgtatgggat ggactcgaaa aaaagatcgg tgggtgcgag cgagagagac gagttcctga
      541 gggcggcatg gcgggtgatg gtcgccgggg agatgcgcac tgagcggttg gtgttcgtgg
      601 acgagtgctc gaccaacacc tcgctggcac ccctctacgc ttggtcgcct aaaggagagc
      661 gagcactttg ttcggtgcca cgcaactggg gggcgaacat aacgctggtg gcgagcatga
      721 gcatgggagg gatggggaga tgcttggcgg ttgaaggccc gaccacaaga gaagttttcg
      781 agacctacct ggagcgagtc ttggcaccct cgcttaggcc ggggcaagtg gtggtgatgg
      841 acaacctctc ttcacacaag ggcgggaggg tcaaggagct catcgaggag cggggctgcg
      901 agctgctcta cctgccgcca tactcgcccg acctcaaccc catagaagaa gcgtttgcga
      961 agatcaaggc gctgctgcgc aaagccgggg cgcgcacccg cgaggcattg atcgaggcga
     1021 tgggccgagc gctggaggcg gttacggtga aggacgccca cggtttcttc gagcaccgcg
     1081 gctaccgcgc tacagcccaa ctgctatgac agatgctcta gtccttcgtt gcaggaagct
     1141 gagagacgca tcgcaagagc atggcggtgt aagatgggtg tgtgggagat ggccttcttg
     1201 atcgaatcca gtcgaagggt tcagaatagg ggatgacgct aaaagctgga ctagtggtcc
     1261 gtctccagct agggcttgat cggattgcaa agcgcgagag gagcaactga attgaacgat
     1321 gagcagccat acggggggag cgatggacag gatcaacgag ttctctccga agccacgcaa
     1381 atggaaaaga agctcgaagc ttacgaacac taccaagcgt accctggcgt aaaccttctc
     1441 gaagagagag acaggcagcg ccagcagctt ggaagaaagc tgcacgaatt ggaccagaag
     1501 ctcgaagcca gcgaaggcta ccgaatctat acgaagatga agctacttgg caagagctac
     1561 tttctcttcg atggaaacta cctggcttta aagcatgtcc tagaggactt cgagcacccg
     1621 gcgacgttct tgaagctgtg ggaaaaagcg gaccgccaca ggctcgatct attcatgagc
     1681 g
//
LOCUS       DASQSL010001531         1011 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_134143, whole genome shotgun sequence.
ACCESSION   DASQSL010001531 DASQSL010000000
VERSION     DASQSL010001531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134143"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..526)
                     /locus_tag="VE844_15600"
     CDS             complement(<1..526)
                     /locus_tag="VE844_15600"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HZC02720.1"
                     /translation="MNLHGDTTTEFVREWQAGKSHLHRSMANRSRWDGADPALAQEQA
                     TCEAMFNALPIATVLTDLYGEIRLVNPAFTTLFGSPPQDVIGKPFDLLHVCMADDQAA
                     GRLQPHDHTGDITTPVDVRYRTNDGGMFIGETVVAAIKNGEGRVLGWLRLIRDITDRR
                     HADALVEANLARLAK"
BASE COUNT          203 a          287 c          298 g          223 t
ORIGIN      
        1 tcttggccag gcgcgcgagg ttcgcctcga cgagcgcgtc cgcgtgcctc cggtcggtga
       61 tatcgcgaat caggcgcaac cagccgagca cgcgaccttc gccattcttg atggcggcga
      121 cgaccgtttc gccgatgaac ataccgccat cgtttgtgcg atacctcacg tcgactggcg
      181 tggtgatgtc gccggtgtgg tcatgaggct gcaagcgacc cgccgcttga tcatctgcca
      241 tgcagacgtg gagaagatca aacggcttgc cgatcacgtc ttggggggga gacccaaaga
      301 gggtcgtaaa cgcaggattg accagcctga tctccccgta gagatctgtc aacaccgtgg
      361 cgatcggtaa cgcattgaac atggcttcac atgtcgcctg ttcctgagcc agcgccggat
      421 cagcgccatc ccacctggat cggttggcca tggagcggtg cagatgactt ttgccggcct
      481 gccactccct gacgaactcc gtcgtggtgt caccgtgcag attcatacca aacctcagat
      541 cacaccgata cgtttttaac acaggagaga catggaccgg ttcatcacgc ggcgagtatg
      601 gcatgtgctc acttgagctg ctcgtcgagg ctctccaaca atggtggcag gcggtgtcct
      661 actgacatac gaagccgtgc gctcttggtg tcgatagtgt gcgcgagcat atgccaatcg
      721 gctccgccgc cggcgcccca aacttagcaa taaacgacac ctcggtaagg cctgctttac
      781 cattcacggc gagggccatt atctctggcg ggcttttgtg ccgtggctcc ctcctcgata
      841 ccctgacgtg aggtcatgac gtaagagtag cagcgttgaa ggtggcagtc gtgatcttgc
      901 cgtcatgttt tggtggaaaa aacgtttccg ttccgtttcg tggtatcctg gacgattagg
      961 acgagtagaa ggtctatagg gtttccggaa actcacggac ggggtcaaga t
//
LOCUS       DASQSL010001532         1277 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_50575, whole genome shotgun sequence.
ACCESSION   DASQSL010001532 DASQSL010000000
VERSION     DASQSL010001532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1277
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50575"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            282..>1277
                     /locus_tag="VE844_15605"
     CDS             282..>1277
                     /locus_tag="VE844_15605"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HZC02721.1"
                     /translation="MRYVLPYWRIFLFSIISLVLLGATEPILPALMKPLLDGSFIEQD
                     PTARLVIPALIIGVFLWRGIAGFAGEMALNWVAHKVVMDLRNEMFQKLVMLPASFHDN
                     TKSAELISKLTFDVAQVAQAATQTLTVLVKDSLAATGLLLYMLYLNWKLWLIAVLAAP
                     VVGLIVTVVSRRLRSLNRKLQQSMGAMTEVIQETIDCQKVVKVFGGQNYEGARFRQVS
                     NQLRQYTMKIVTTSLANSPIIQVTMAIALATMVYIAASEARAGTLTAGDFIAFFTAMV
                     LLLSPVKRLTDINNPLQRGLAAAESIFALIDEPQELDEGKISMGRAAGEIRFCELG"
BASE COUNT          276 a          375 c          348 g          278 t
ORIGIN      
        1 gcccgacggc ggccagacgg ccgtcgcgta ccccgggggg atggccaaca acagcccaag
       61 cctgcccgag ccggcgtagg ctgcggcaac gaggaggatc aagccgaggt aacggattag
      121 tttactcccg ttttccatta taatttgagc ctgccccaga cgataaatag gcgcaggtgc
      181 ttaatttacc cctaccttcc cccctacgaa aagggaaaac cttccttagc ctcctgagca
      241 aaggtctaaa ggttaatagc gcagatcttt accggcgcct gttgcgttac gtcttaccct
      301 attggcgcat cttcttattc tcgatcatca gcttggtact gcttggggcc accgagccga
      361 tcctgcctgc cttaatgaaa ccccttttgg atggcagttt cattgaacag gatcccaccg
      421 cacggctcgt gatcccagcc ttgatcatcg gcgtatttct gtggcgcggg atcgcaggtt
      481 ttgcgggcga gatggcgctg aactgggtag cccataaagt ggtgatggac ctgcgcaacg
      541 agatgtttca aaaactcgtg atgttgcccg cgagcttcca cgataacacc aaatcagctg
      601 agctgatctc taagctcacc ttcgatgtcg cccaggtcgc ccaagccgcc acccagactc
      661 ttacagtgct ggtcaaggac tcgctggccg caaccggcct actcctctac atgctctatc
      721 tcaactggaa attatggctg attgcggtgc tggccgcacc ggtcgtgggc ctgatcgtca
      781 ccgttgtgag ccgacgcctg cgcagcttga accgcaagct acagcagtcg atgggggcga
      841 tgaccgaggt gatccaggaa acgatcgact gccagaaggt ggtcaaggtc ttcggcggtc
      901 agaactatga aggcgcgcgt tttcgccagg tcagcaacca attgcgccaa tacaccatga
      961 agatcgtgac cacctcccta gcgaacagcc ccatcattca agttactatg gctatagcgc
     1021 tggcgaccat ggtctatatc gccgcctccg aggctcgggc gggaacccta acggcgggag
     1081 acttcatcgc cttctttacc gccatggtct tgctgctctc gccggtaaag cgtttgaccg
     1141 atatcaataa ccccctacaa cgcggattag ctgcggccga gagtatcttt gcgctgatcg
     1201 atgagcccca agaactggat gaaggtaaga taagtatggg ccgggcggca ggtgagatcc
     1261 gcttctgcga gctcggt
//
LOCUS       DASQSL010001533         1400 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_147970, whole genome shotgun sequence.
ACCESSION   DASQSL010001533 DASQSL010000000
VERSION     DASQSL010001533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1400
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147970"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            370..>1400
                     /gene="hflK"
                     /locus_tag="VE844_15610"
     CDS             370..>1400
                     /gene="hflK"
                     /locus_tag="VE844_15610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018286746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HZC02722.1"
                     /translation="MYPPSGPRQPEMDFEQILARLREGWNRLNRRLGGGGAGLAVLGV
                     IGIIAVIWLATGIYTISPGENAALRLFGAVQGPPVTEEGLHWWWPGPIGKKDVVLVTG
                     TRRMELGFRSNEAAAATPIPTEALMITGDLNIVDVHVVVQYNIKSLNDFLFQVDDPGD
                     ESRGIPEGRPDGRTLKDAAEAALRLVVGQHSIDDVLVGRREEIEENTRERLQQILDGY
                     QTGINVEVVQLQDVKAPEEVRDAFDDVLRARQERDTKINQALAFEADIIPRAEGDAAR
                     IIEAAQAFRQARVARAQGESDRFVSVLREHQNSREVTRQRLYLEAMEEILPGITKIVL
                     SPEAQSVLIL"
BASE COUNT          322 a          388 c          408 g          282 t
ORIGIN      
        1 aaatacagtt ttgacacaaa cagccacgcc cgctaatcaa gtacgtatta ttgggagcgg
       61 ttaataggtg acactatcta actcagctcc agatcgacag ctccctgtgg tgtcatctat
      121 ttatcgctcg gagtaataag actaacctga gtttcttgaa ttgatggctt agctgcttgt
      181 aagctggctt gctatagtcg ttaccgaagg aatttagccc cctcctctcg cgtgggccgg
      241 ggaggataat gcccacccta gaatggatct caaagatagt ggataataca ggaaagctag
      301 cagccgcaca tttctctaaa cttgacatag caccatccaa agacaatttt cctataagga
      361 cgctgaacca tgtacccacc cagtgggcct cgtcagcctg aaatggactt tgagcagata
      421 ttggcccggt tgcgggaggg ctggaaccgg ctcaaccggc gcctgggcgg cggcggcgcg
      481 gggctggcgg ttctgggagt catcggcatc attgccgtta tctggctggc taccggaatt
      541 tacaccatca gccccggcga aaacgccgcc ctccgcctct tcggagctgt tcaaggccct
      601 cctgtcaccg aagaaggtct gcactggtgg tggccagggc ctattggcaa aaaagatgtg
      661 gtgctggtta ccgggacccg gcgcatggag ctgggcttcc gcagcaatga ggccgccgcc
      721 gccactccca tccctaccga agccctgatg attaccggcg acctgaatat cgttgacgtg
      781 catgtggtag tccagtacaa catcaaaagc ctcaacgatt tcctgtttca ggtagatgac
      841 ccaggcgacg agtccagggg catcccggag ggccggcccg acggccgcac cctgaaggac
      901 gccgccgagg cagcattgcg gctggtggta ggccagcact ccattgatga tgttctggta
      961 ggaagacgcg aggagattga ggaaaacacc agggagcgct tgcagcaaat cctggacggc
     1021 taccagactg gcatcaacgt ggaggtagtg cagcttcagg acgtgaaagc tcctgaggaa
     1081 gtccgggatg cctttgacga cgtgctgcgg gcccggcagg aaagggacac caaaattaac
     1141 caggccctgg cctttgaagc ggatattatt cccagagcag aaggcgacgc cgcgcgcatt
     1201 atagaggccg cccaggcctt ccgtcaggcc cgggtggccc gcgcccaggg tgagtccgac
     1261 cggtttgtgt cggtcttgag agagcaccag aactcccggg aggtgacccg gcagcggctt
     1321 tacctggaag ctatggaaga aatactcccc gggatcacca aaatcgtatt atcacccgag
     1381 gctcaatcgg tgctgattct
//
LOCUS       DASQSL010001534         1606 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_190307, whole genome shotgun sequence.
ACCESSION   DASQSL010001534 DASQSL010000000
VERSION     DASQSL010001534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1606
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190307"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            203..1512
                     /locus_tag="VE844_15615"
                     /pseudo
     CDS             203..1512
                     /locus_tag="VE844_15615"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS701 family transposase"
BASE COUNT          337 a          450 c          483 g          336 t
ORIGIN      
        1 tttaaaccct tttgtaaggc cataaaacaa cctacaatcc cctcatcatc acaaagacaa
       61 acaatcattc atctgcaaaa acctacccct taggcataat tgaagcaaga cccccttttc
      121 ccagaggtca tgtaaagccc tagtactact ttgtcagttg tgattccagg cggtatcctt
      181 tactaaaaaa agaaggatac ccatgaatgt tcatgccagt ccggcttcat tacccgagtt
      241 ggacgacttt ttatcgcctt tcaaagtacg ctttggtcgt cccgaagccc aagctgcttt
      301 ggcacgctac gtgacggggc ggctgacgca actgccccat aagaatggtg acaccatggc
      361 ccaggccgtc cccggcaccc atgagcagcg cttgcagggg ttactcacca ccatgaactg
      421 ggacgaagag gaacttaacc gacagcgggt cgaaaagatg agcgccgagg ccacggttgg
      481 caatggcgtg ctgatttttg atgacacggg ctttgccaag cagggcaagg cttctgttgg
      541 gtggcgcggc agtactcggg gacgctgggc aaggtgggca actgccaggt ggcagtgacg
      601 tgctgttacc gtgatccgct ggcgagttgg cccgtggcgg tgcgcttgta cctgcccgga
      661 gcttggacag ccgacccaga gcgcttgaaa cgggctcggg tacccgctga cgtgacgttt
      721 cagaccaaac ctgagattgc cctgtcgctt ctggatcagg cgcgtgtctg gggcgtgccc
      781 catcgctgtg tggtggccga cgccgattat ggcgacaacc cgaaattctt ggctggattg
      841 gaggaacgaa ccgaacgcta cgtggtggcc gtgcggtgtg actttcaggt acgttgcaaa
      901 tgccgcggcg cgcctccaag ccagcgagcc gatcaggtgt tggcagcgct gcccaagagc
      961 cagtggcgca ccatccgctg gcggcacggc accaagggct ggttgcgcaa aaagtttgtg
     1021 gccctgaggg cctggcgcat cacggctgag ggcgaagccc acatcggctg gttgttgggg
     1081 gagcgagcgg ctcgtgggca acctgaggag cgcaaattct attggagcaa cctgccagta
     1141 tcgtcctcgt tggaggagct ggtcgactat gcgcatcgcc gccatgcgat tgagcacttc
     1201 catgaggaag ctaaagaaga attgggttgg gatcagtatc aaggccgtct gtggccgggc
     1261 ttccaccgcc atgccacggc ggtgatgctg gccatgagtt ttctgacgtg cttggagttg
     1321 caacaccgtc acggtcaggc caaacggggt cgcccacgcg accctttttc cccctcggcc
     1381 cgattggcgt cgtcgtgctc tgccagcggt acaccggcag gtggcgcagt ggctgcgtca
     1441 tcaagctgtg gtgtggtgga tcaccacgga gcagttcagg aaattgtgct cgctgagaat
     1501 ctgacaaagt agtattaggc gtgagcagat attctgcatc acccgctccg actgtgtgcc
     1561 cagacgctcg actagcgcac gcgtttgcac catcaactcg ccaact
//
LOCUS       DASQSL010001535         1236 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_190308, whole genome shotgun sequence.
ACCESSION   DASQSL010001535 DASQSL010000000
VERSION     DASQSL010001535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1236
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190308"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            62..829
                     /locus_tag="VE844_15620"
     CDS             62..829
                     /locus_tag="VE844_15620"
                     /EC_number="1.1.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013013943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003858 - 3-hydroxybutyrate dehydrogenase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyrate dehydrogenase"
                     /protein_id="HZC02723.1"
                     /translation="MRLDGRGAIVTGAANGLGLSIARTLSREGARVALADLDRENAEK
                     AASELVGAISIQLDVRDRDAVKAAMEKTVSEFGRLDILVNNAGVQRIAPIDEFDEAHW
                     EVIIGTMLTGTFLCTKHALPHLRRSSSGRVINIASVHGLVASPFKSAYVAAKHGVLGF
                     TKALALEEAANGVTANAVCPSYIRTALAEEQVTDQAQANNMTEAEALEEIILQPVAIK
                     RLLEPEEVSELVVYLASDLASGITGSAIPIDCGWTAR"
BASE COUNT          284 a          324 c          368 g          260 t
ORIGIN      
        1 gaaaagactt cgccataggt tagagtagga gacaaacaaa ggtaggaggg ataacaccat
       61 catgaggttg gatggccggg gagcgatagt taccggtgcc gctaacggcc tgggtctcag
      121 catagcccgt accctatccc gggaaggggc acgtgtggct ctggcggatc ttgaccggga
      181 aaacgcggag aaagcagcat cggagttagt aggagccata tctatccagc tagatgtacg
      241 tgaccgagac gccgtgaagg ccgcgatgga gaagacagtt tctgaatttg gtcgcctgga
      301 catcttggtg aataatgccg gggttcagag gatcgcgccg atcgacgagt tcgacgaggc
      361 ccactgggaa gtaatcatag ggacgatgct gacgggtacc ttcttgtgta ccaagcacgc
      421 gctacctcac cttcgacggt ctagctccgg tcgagtaatc aacatcgcga gcgttcacgg
      481 tctggttgcc tcgccgttca aatccgccta cgtagcagcc aagcacggcg tcttgggctt
      541 cacaaaggct ctagcgttag aggaggcggc caatggggtc accgccaacg ccgtttgccc
      601 gagttacata cgtacagctc ttgcggaaga gcaggtaacc gatcaagcac aggcgaacaa
      661 catgaccgaa gcggaggcct tggaggagat aatcctacaa cctgtggcta tcaagcgact
      721 tctggagccg gaggaagtat ccgagctggt tgtatacctg gcttccgacc tggctagcgg
      781 cataaccggt agcgccattc ccatagattg cggatggact gcccgttaga tcgttcttct
      841 gcgccagtgc tctttcgggc ctaaagagtt gatctccttt gctcgctggt tttgcgacgc
      901 tttaatcacc gatccggagg tggacctgtg gcttggacat ttcgggcacc accagcatct
      961 tggggtcttt gcccacgtag cggtacgcgt gctttacggc ctcctcaaag gtgttggtgg
     1021 ggatacaacc cattcctcgg gcaaaacccg gcgcctttgc gcccgcgaag gggatggttc
     1081 aacttcactg caaaccgcta taaaaggcgt ggcgggcaac acaacatgta gcagggttgg
     1141 atagatatcc acaactagcc taggagacta cggcaaaggc gtagatgcta gcgtagctag
     1201 catcagctcc acctcagtgg cttcttcgct cagtag
//
LOCUS       DASQSL010001536         1223 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_190317, whole genome shotgun sequence.
ACCESSION   DASQSL010001536 DASQSL010000000
VERSION     DASQSL010001536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1223
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190317"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..674
                     /locus_tag="VE844_15625"
     CDS             <1..674
                     /locus_tag="VE844_15625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02724.1"
                     /translation="VPELPPASSEGPTESSEGPTESPETATDEPGIRVTFRPSRRRAD
                     SGQSMEYRISGEPEYILGRVRSYFESDAWPYRPKEGWADQNSSNGLVKRDWSDERSQV
                     TYRVDPGPSARGFLVWLIGFGLPFGVVTYVLGFSWVIVFLFGVAMAITWLFWVLFERG
                     SSLIIINVSAIPTSEPDTSKVVLAVGRDTGQPPTRSAPKDAKYWRPVAKFIEHELGGV
                     RESSA"
     gene            880..1086
                     /locus_tag="VE844_15630"
     CDS             880..1086
                     /locus_tag="VE844_15630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02725.1"
                     /translation="MDTLSTQYRPREVSETLKELNKVAHYIHDDVVNAYVALTEITLL
                     SSDRVRKAAESKAAENLASASNSI"
BASE COUNT          290 a          340 c          356 g          237 t
ORIGIN      
        1 gcgtccccga actaccgccc gcatcctctg aggggcccac agaatcctct gaggggccca
       61 cagaatcgcc cgagacggcc acggatgaac ctggtataag ggtgaccttc cgtccgagcc
      121 ggagacgggc ggacagtgga caaagcatgg aatacagaat aagcggtgag ccggagtaca
      181 tcttagggcg cgtccgtagc tacttcgaga gcgacgcttg gccctaccgc ccgaaggagg
      241 gatgggccga ccaaaactcc tccaacggcc tagttaaacg cgactggagc gatgagcgct
      301 cgcaagtgac ctaccgcgtt gaccccggcc ccagcgcgcg gggattcctc gtgtggctca
      361 ttggctttgg cctcccgttc ggggtcgtca catacgtgct ggggttttcc tgggttatcg
      421 tgtttttgtt cggggtcgcc atggccataa cgtggctttt ctgggtgctc ttcgaacggg
      481 ggtcgtctct catcattatc aacgtctcgg ccatccctac ctcggagccg gacactagca
      541 aggtcgtgct ggcagtgggc agagatacgg gccaaccacc caccaggtcc gccccgaagg
      601 acgcaaagta ttggcgaccc gtcgcaaagt tcatagagca cgagctgggc ggcgtccggg
      661 agagcagcgc ctagtacctc tagagcggct tagccccggt ccaacggcat agagcggtcc
      721 tgtgcgctgt cctgtgttga ccaaacaatt gtttggtcaa caagagagtg catatctatc
      781 caacgccaca agtgttaggt ttaatgttgg gaggttggac cgcggacttg cgctcatacg
      841 tttcacctga accgaatggt gggtagtttc gaccggaaga tggacaccct atctacccaa
      901 tatcgcccac gtgaggtaag cgaaacgctg aaagaactga acaaggtagc gcactacatc
      961 catgatgacg tggtgaatgc ttatgtggcc cttacggaga ttacgctgct cagttccgac
     1021 cgcgtgcgca aagcagcaga gagcaaagca gcagagaacc tggcttcggc ctccaactca
     1081 atataataca agagtgcccc gcattccgtt ccacgcctca gcatcgcaac aacaaaaccg
     1141 gaaacggaaa agcaagacca gtaaaagggg gtaggaatat gcagagaggg cagaatgttt
     1201 agcaggtatt atgcgttaac aca
//
LOCUS       DASQSL010001537         2262 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_116411, whole genome shotgun sequence.
ACCESSION   DASQSL010001537 DASQSL010000000
VERSION     DASQSL010001537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2262
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116411"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            411..1319
                     /locus_tag="VE844_15635"
     CDS             411..1319
                     /locus_tag="VE844_15635"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC02726.1"
                     /translation="MEKLKELNFHRQESQLVDHKRTLEEYFREHPPATSAEAAARIEE
                     LTGIKRGPTQRREFLKELGMKPRKVGQIPAKADVKEQEGFKEEQLEPRLVEARVGKRV
                     VFFMDAAHFVYAPFLALVWCFERLFVKAPSGRQRLNVLAALNAMTKEIFTVQNLTYVT
                     AETVCELLRLLAGAHPGMAITIVLDNARLTEVRPGAGTGPEPGHRVVILAPYSPNLNL
                     IERFWKWVKKRCLYSKYYATSADFQKAIQECIAHAHSQHQAELESLLTLRFQTFREVP
                     VIGEGGQVGPFPGAKQSQRKVLSKAA"
     gene            1728..2042
                     /locus_tag="VE844_15640"
     CDS             1728..2042
                     /locus_tag="VE844_15640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02727.1"
                     /translation="MDLPASGTAIKRLRRELGLHWRFENARWWAEHKGDLKKLTAREF
                     AHKYSVGVSAAAVQRIKRVGARLRPAGWWREPEVTHDLLELPTREAAEKYGISESGVL
                     RI"
BASE COUNT          531 a          593 c          700 g          438 t
ORIGIN      
        1 ggctctggcg gaagaccggg gcggtgaggt cgtctgcggc ggtgaggcca cgctggaggc
       61 cgacccggtg ttgtttcggc aaaccatcag caatctcctg tcaaacgcgc tcagctatac
      121 ttcgcgcggg acaagatgaa acttttgagg atctctggta aaagttggac ggcaataacg
      181 agctcaactt cgatcgggag gctctcaaat gctcaagctg gagtttagcc cagaagaggt
      241 agaggcgttg cgctattggc ggttccacca tccgcacccg caggtgcaac ggaagatgga
      301 aatagtctac ttgcggagcc agaagctgga gaacgaccaa atccagcaat tgtgcggtat
      361 ctccaaagcc agcaatctat cgctacctgc acgaatatca agcgggggga gtggagaagc
      421 tcaaggagtt gaactttcac cgccaggaaa gccagctggt cgaccataag aggacgctgg
      481 aagagtattt tcgtgagcat ccgccagcca cttccgccga agcggcggcc aggattgaag
      541 agctgaccgg gatcaaacgc gggccgaccc agaggcggga gttcttaaag gagctgggga
      601 tgaagccacg caaggtggga cagattccag ccaaagccga tgtcaaagag caagagggat
      661 tcaaagaaga gcaacttgag ccacggttag tggaagccag agtgggcaaa cgagtggtct
      721 tctttatgga cgccgcgcac tttgtctatg cgccgtttct cgccctggtg tggtgctttg
      781 agcgactgtt tgtgaaggcc cccagtgggc gccagcgctt gaacgtgctg gcggccttga
      841 atgccatgac caaggagatc ttcaccgtcc agaacctgac ctacgtcacg gccgagacgg
      901 tctgtgagtt gctgcggctc ctggcaggag cccatccggg gatggcgatc accatcgtac
      961 ttgacaatgc gcggctcaca gaagtgcgcc ctggtgcagg aactggccca gagcctgggc
     1021 atcgagttgt tatacttgcc ccctactcgc ccaatctcaa tctgattgag cgcttctgga
     1081 agtgggtcaa gaagcgctgc ctctactcga agtactacgc cacaagcgct gacttccaga
     1141 aggcaatcca ggagtgtatc gcgcacgcgc acagtcagca tcaagctgag ttggaaagtt
     1201 tgttgacctt gcggtttcaa accttcaggg aagtgcccgt aattggcgaa ggaggccagg
     1261 tgggcccctt tcctggggct aaacagtctc agagaaaagt cttatctaaa gccgcgtgaa
     1321 gtatagctac ccgggtagac cggcggctca ctacaatccc gacccccact acctcagctt
     1381 aaaccagcat aaataggacg cccgagaggg cggaaggaga gatgaaaatg gaactggaga
     1441 ggcgcggtta caagaatgaa cacggttcgg gccggttgag ttggtaaaac gtacgactca
     1501 gcgccattgc ggaacttgat gccgcgcaaa gcccaaatca tcggtaagac gactgatcat
     1561 accggccagc cgtgggacgt ccgtgagcag cgtcccactc cctacagctt tttgctggcg
     1621 cttggctggc ccgaggggga gccacgcggg aggggagcac gggcggaccc cggatcatct
     1681 ctacccctga gcttgtagcc tatctccaaa ctacccaagt ccgcgatgtg gatctgcccg
     1741 ccagtggtac agctatcaag cggttgcgcc gtgagctggg gctgcactgg cgctttgaga
     1801 acgcccgctg gtgggctgag cacaaggggg atctgaaaaa gctcacggcc agggaattcg
     1861 ctcacaagta tagcgtaggt gtgagtgcgg cagcggtgca gcggatcaag cgcgttggcg
     1921 ccaggttgcg cccggcggga tggtggcggg agccggaagt cacgcatgat ctgctggagc
     1981 tccccacccg ggaggcggca gagaagtacg ggatctcgga gtcaggtgta ctgaggatat
     2041 agatcgctac tcaagggagg ggtatgaaaa cattcgccct accaagcgat ctcatggctc
     2101 gcgtatacac tgacctcggc gggatcgtgc tgaaagcgat ccccatcaag gaatttctgc
     2161 ggcttgcaaa gcctttatcc atgagtttca cggggagcca aaaatgttga ttgatttccg
     2221 ggtgcattcc caaaatatgt catcttgatt taagcggctt gg
//
LOCUS       DASQSL010001538         1430 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_170887, whole genome shotgun sequence.
ACCESSION   DASQSL010001538 DASQSL010000000
VERSION     DASQSL010001538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1430
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170887"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1430)
                     /locus_tag="VE844_15645"
     CDS             complement(<1..>1430)
                     /locus_tag="VE844_15645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012526294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HZC02728.1"
                     /translation="LVPLDGGRFATSDLNDLYRRVINRNNRLKKLMELRAPEVIVRNE
                     KRMLQEAVDALFDNGRRGRPLRGPNKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRS
                     VIVVGPELKMHQCGLPKKMAIELFKPFIYHKLEEKGYVATLKSAKRMVEKERPEVWDV
                     LDEIIREYPVLLNRAPTLHRLGIQAFEPVLVEGKAIKIHPLVCAAFNADFDGDQMAVH
                     IPLSIEAQTEARALMLSTNNILSPAHGKPLTIPSQDMVLGSYYLTKVRGNAKGEGRIF
                     ANFDEVRIAYDQGVVALQARIKVRTNKGELVDTTVGRVLFYDTVPKEIPFSSVNRQMD
                     KRALSELVGECYLRCGQDRAVEFLENLKQVGFQYATRSGMSISIEDMRVPQLKEELVE
                     KARQEVIEVEKQYRDGLITKGERYNKIIDIWAHVTEQISDEMFREMETEDEHLMRGEV
                     GDSAEFNPIFIMADSGARGGIQQIRQ"
BASE COUNT          277 a          421 c          397 g          335 t
ORIGIN      
        1 aactggcgaa tttgttgaat gccgccgcgt gcccccgagt cggccataat gaaaatgggg
       61 ttgaactcag cactatcgcc tacttcacct cgcatgaggt gttcgtcttc ggtttccatc
      121 tcgcggaaca tttcgtccga gatctgctcg gtgacgtggg cccagatatc gatgatcttg
      181 ttataacgct ctcccttcgt gatgaggcca tcgcggtatt gcttttcgac ctcgatcacc
      241 tcttggcgag ccttttccac cagttcttct tttaactgcg ggacgcgcat gtcttcgata
      301 gagatcgaca tgccggaacg ggtggcgtac tggaacccga cttgcttgag attctccagg
      361 aattcaaccg cccgatcctg accgcaccgg aggtaacatt cgccaaccag ctctgagagg
      421 gcgcgcttat ccatctggcg attcacgctg gagaagggta tttcctttgg cacagtgtcg
      481 tagaatagca cgcggcccac ggtggtatcg acgagttcac ccttgttagt gcgcactttg
      541 atccgcgctt gcagggcgac caccccttgg tcgtaggcga tgcggacttc atcgaaattg
      601 gcgaaaatcc gcccctcgcc cttcgcatta ccccgcactt tggtgagata atagctaccg
      661 aggaccatgt cctggctcgg aatggtcagc ggttttccgt gtgcaggcga taaaatatta
      721 ttcgtcgaca acatcagggc gcgcgcttca gtctgagcct cgatcgacag cggaatgtgc
      781 acggccatct ggtcgccgtc gaagtccgcg ttaaaggcgg cacagacgag ggggtgaatc
      841 ttaatggctt taccttcgac cagaaccggt tcgaaagcct gaatacctaa acggtgtaag
      901 gttggggctc ggttcagcag caccgggtat tcgcggatga tctcgtcgag cacatcccag
      961 acctccgggc gctctttctc gaccatacgc ttggcgcttt tcagcgtcgc cacgtagccc
     1021 ttttcctcca gcttatgata aatgaagggc ttgaagagct cgatcgccat cttcttcggc
     1081 agcccgcact ggtgcatctt caactcaggg ccgacgacga tgaccgagcg acccgagtag
     1141 tccacgcgct tgccgagcag attttgacgg aagcgcccct gcttgccttt cagcatgtcg
     1201 ctcagcgact tgagcgggcg cttgttcggc ccccgtagtg gtcggccacg acgaccgtta
     1261 tcgaacagcg cgtccacggc ctcttgcagc atccgcttct cgttgcgcac gatgacctct
     1321 ggcgcgcgaa gctccatgag cttcttcaaa cggttgttgc ggttgatgac gcgccgatag
     1381 aggtcgttca agtccgacgt ggcgaagcgg ccgccgtcca gaggcacgag
//
LOCUS       DASQSL010001539         1867 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_25271, whole genome shotgun sequence.
ACCESSION   DASQSL010001539 DASQSL010000000
VERSION     DASQSL010001539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1867)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1867)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1867
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25271"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..786
                     /locus_tag="VE844_15650"
     CDS             <1..786
                     /locus_tag="VE844_15650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02729.1"
                     /translation="GLPYSDHCRVLEKMFPSWTVDQLFQINGDGIEFVPEPSKDQAVT
                     PSRSIASAAPADQLTEAKISNLWPRTNPAVLDDLMARVNNAREEITVFGLTRNFYAKD
                     DMLPLFETKAAEIPVTFYVMDPHCDSRRDRYRIEPVEAAMEDPARYIREILRPLFDAS
                     QRIIPTTPSAGMRIFTFNFPCAFAMEKIDRSCRVMLYGHGKRGTEGPMLVFDDGTPYW
                     TYFTDQLQWLERLAVNPREPWVSKGLIVRALSEADLRDNREGP"
     gene            783..1601
                     /locus_tag="VE844_15655"
     CDS             783..1601
                     /locus_tag="VE844_15655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012851265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HZC02730.1"
                     /translation="MIDSSDGRQLLAIAKHATAIAGGLVRSGAPHTLTSKGDRDLTSD
                     VDITVEQFIRNFLHQHTPDLGFFGEEGGGACQADGLRWVLDPIDGTINFLHGLPLCAV
                     SLSLMQSDMTLVGVIDMPFLGAQYYALSEHGSYINGQRLHVSTTQTLNAALVSIDQYT
                     FGAGAERVNQVRRRLVEYLASHAQRVRMLGASAIDLAWTAHGRLDACIMLGNKPWDTS
                     AGVLIAREAGARVLDLHGANHATHSSATIAVSPSLEHELMTAVHSALANPAVSE"
BASE COUNT          429 a          551 c          470 g          417 t
ORIGIN      
        1 ggactcccat actcagatca ctgtcgcgtc ctggaaaaga tgtttcctag ttggacggtc
       61 gaccaactgt tccagattaa cggtgatggg attgagttcg tccccgaacc atctaaggac
      121 caggcggtaa cgcctagccg atctatcgcg tcagctgcgc cggccgatca actcacagaa
      181 gccaagatct cgaatttgtg gcctcgcacg aaccctgctg tgcttgacga tctaatggca
      241 cgtgtaaaca acgcccgtga agagatcacc gtttttggct taacccgcaa tttctacgcc
      301 aaagacgata tgctcccatt gtttgagaca aaagcggccg agataccggt aacattctac
      361 gtcatggacc cccactgtga ttcgcggcgc gatagatatc gtatagagcc cgtcgaagcc
      421 gcaatggaag accccgcgcg ctatatacga gaaatcctcc ggccactctt tgatgcttcg
      481 caaagaataa tacctacaac accaagtgca ggcatgcgaa tattcacctt caattttcca
      541 tgcgctttcg cgatggagaa gattgatcga agctgccgtg taatgcttta cggtcacggc
      601 aagcggggca cggaagggcc gatgctcgtc tttgacgatg gcacaccata ctggacctac
      661 ttcacagacc aacttcaatg gcttgagcga cttgccgtca acccgcgcga gccttgggta
      721 agtaaaggac taatcgttcg agcactgagt gaagctgatc ttcgtgataa tagagagggt
      781 ccgtgattga tagctctgat ggtcggcaac tactagctat cgcaaagcat gcaactgcca
      841 tagccggcgg actggtacgc tccggggcgc ctcatacgct gacatcgaaa ggtgatcgag
      901 atctcacctc cgatgttgac atcactgtcg agcagttcat tcgcaacttt cttcatcaac
      961 atacacccga ccttggattc ttcggtgaag agggcggcgg tgcctgtcag gctgatggac
     1021 tgcggtgggt gctcgatccc atcgatggca ccatcaactt tctccacgga ttgccactct
     1081 gtgccgtctc tctcagtctc atgcagagtg acatgactct cgtcggtgtc atcgacatgc
     1141 cgttcctagg agcgcaatat tatgcattga gtgaacatgg ctcctacatc aatggtcaac
     1201 gactccacgt gagtacaact caaacactca atgccgcact cgtatcgata gaccaataca
     1261 cattcggcgc cggtgcagaa cgcgtgaacc aagtacgtcg tcgactcgtg gaatacctcg
     1321 cctctcacgc tcaacgcgtt cgcatgcttg gcgcgtctgc tattgacctc gcatggactg
     1381 ctcacggtcg actcgatgca tgcatcatgc tcggaaataa gccgtgggac acaagcgcgg
     1441 gtgttctcat cgctcgggaa gctggtgccc gagtcctcga ccttcacggt gcaaatcatg
     1501 ctacgcactc ttccgcaact atcgcagtga gtccttccct cgaacatgag ttaatgactg
     1561 cagtccactc cgctcttgcg aaccctgctg taagtgaatg acccgcaaag tcacgcgccc
     1621 gtagccgtaa cccgaccacc ccgttcgtct gggtcagcca attctcgaca cgaaacggcc
     1681 tcctcacctc atcgggcaaa gatcagttga gctgtcccgc ctatagcttt atgaccggcc
     1741 ccgggagtga ggtgcgacgc actgggcacg gctcaccgcg ctcaggctga cgttggtagc
     1801 gcggcatctt gtcgccgcac tgcaggccac agctgtatcc acacgccaga cgctgttaca
     1861 gcctgtc
//
LOCUS       DASQSL010001540         2358 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_161045, whole genome shotgun sequence.
ACCESSION   DASQSL010001540 DASQSL010000000
VERSION     DASQSL010001540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2358
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161045"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1268
                     /locus_tag="VE844_15660"
     CDS             <1..1268
                     /locus_tag="VE844_15660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02731.1"
                     /translation="EAIHVLNISHTGIAFAQSLDDVTVAEGVKQRARAMFDQLHPDTR
                     DKLIKIPRRLLRLIVQCGRRIVRAATLIGMLLTTMLTKRRDRYGGYKGCCKAQWIAKV
                     FGVDASRVKSERAKLIEEGWFTREPTTPGARKKFGQWVRLNLMPPEPTASPGAPSAED
                     PSKVQPQNAPSETKVQPLLNPSLSSSEEILKNQALTTSDPDPGAYQPPTSEQPTWTDI
                     KLEDLHHNIRSEQLRQEAIQRGYIRDTPSDRVNFFAAIAHTLRVSKTNACGLLRTVVE
                     KGLWYVISQADEYNGIVRLKQATQTQTAQETQQVQANPFLTTSTRGDLRDRDQPIELS
                     QDALIVRTVTADLHKTGVTGDVLQTVKRHGYLRDWDRDRWERAEQELAQARLLQARQR
                     YQEMEMTAVGDILAADSRERDVHGKPARK"
     gene            complement(1527..2114)
                     /locus_tag="VE844_15665"
     CDS             complement(1527..2114)
                     /locus_tag="VE844_15665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02732.1"
                     /translation="MAVSLITIEKRYGTTTMAIFSVSLADRKPVFMCVVETPYENEHR
                     GVVMVDAGKFLKLWRADPYKHHQEIATGNPHTWRQDRKFTAAAEGFSEGFANPVPLPE
                     VEYTEVKQTSVSYKCLRFGRHEQTRYVRYVSFINGITRTIWLLSHGCSAFPVECPMSS
                     ALNFHRAASVAGTRVFTVRDVQQGLIPVTHLPPSQ"
BASE COUNT          603 a          649 c          653 g          453 t
ORIGIN      
        1 tggaagccat ccatgtcctg aatatttccc atacgggcat tgcgtttgcc caaagcctcg
       61 atgacgtgac ggttgccgag ggggtcaagc aacgagcccg ggcaatgttt gaccaactgc
      121 atcccgacac ccgggataag ctcatcaaaa tccccaggcg gcttctcaga ctcatcgtcc
      181 agtgcggtcg gcgcatcgtg cgagccgcaa cactcatcgg catgctgctg accacgatgc
      241 tgaccaaacg gagagaccgc tacggtgggt acaaaggctg ctgtaaagcg cagtggatcg
      301 ccaaagtctt tggcgtcgat gcctcacgcg tcaaaagcga acgggcgaaa ttaattgagg
      361 agggatggtt tacccgcgag ccgacgaccc ctggtgcgcg caagaagttt ggacaatggg
      421 tgaggctcaa cctcatgcca cccgagccca cagcttcgcc tggggcaccc tccgctgagg
      481 acccatccaa agtgcaaccg caaaacgccc cttccgagac aaaagtgcaa cctcttctta
      541 acccctctct ctcttctagc gaagagatcc tgaagaacca ggcactcacc accagcgacc
      601 cagaccctgg tgcttatcag ccacccactt cagaacagcc cacctggacg gacatcaaac
      661 tcgaagacct gcaccataac atccgcagtg aacaactccg ccaggaggcg atccaacggg
      721 gatatatcag ggacaccccg tccgaccgcg ttaacttttt tgccgccatc gctcataccc
      781 tacgggtctc caaaaccaat gcctgtgggc tccttcggac cgtcgttgag aagggtcttt
      841 ggtacgtcat cagtcaggcg gatgagtaca acggcatcgt caggttgaaa caggccactc
      901 aaacccaaac ggcccaagag acacagcaag tccaagcgaa ccctttcctg acgacaagca
      961 cccgcggcga cttgcgggat cgtgaccagc cgattgaact gtcacaggat gcgctcatag
     1021 tccggaccgt gacagcagat cttcacaaga cgggtgtgac aggcgatgtg ttgcagacgg
     1081 taaagcggca tggctacctt cgggattggg acagggatcg ctgggagcgg gccgaacagg
     1141 aacttgccca agcccgcctg ctccaagccc gtcagcggta ccaagagatg gagatgaccg
     1201 ctgttggcga tatccttgcg gcagatagcc gcgagcgcga tgtccatggc aaacctgcta
     1261 ggaaatagca cgccgttata cggtaaggga taccctgaaa gaagcgggct gtaagttccc
     1321 aaaaagccac aggagagaaa taagcggaca gtagcggcaa gaaaacatac tgcttagagg
     1381 gcgcagaatg gcgcagaagg cggggaaaac agcattgtgg tcgctttctc tgtcagcgag
     1441 tgaaaaccgg cctgctgggg ctttataggg cgtctggagg ggttaattca gcccttggcg
     1501 gtctataggg aagcgcaaga gcgctgctac tgggaaggag ggaggtgggt aacaggtatg
     1561 agaccctgct gcacatcacg cacggtaaag acccgtgtcc ccgccactga cgcggcacga
     1621 tgaaagttga gagcggagga catggggcat tccaccggaa aggcgctaca gccgtgggac
     1681 aagagccaaa tcgtgcgggt gatcccattg ataaatgaca cgtaacggac ataccgggtc
     1741 tgctcgtgcc ggccaaacct taaacatttg taggagacag acgtttgttt tacctccgtg
     1801 tattcgacct cagggagcgg tacggggttt gcgaagccct ctgaaaagcc ctctgccgcg
     1861 gcggtgaatt ttctgtcctg acgccaggtg tgcggattgc ccgtggcgat ctcctgatga
     1921 tgcttatacg gatcagcccg ccacagtttc agaaatttcc cggcgtcaac catgacaacc
     1981 ccgcgatgtt cattctcgta tggagtctcg accacgcaca taaagaccgg ctttctgtct
     2041 gctaaggaca cagagaagat cgccatcgtc gtcgtgccat atcgcttttc aatggtgatg
     2101 agtgacactg ccatgcttcc cttattctct caaagtaacc tgccggtcgt aaagcaccac
     2161 gacgataaaa aaacgccggt atacagggca ctaaataacg cagaaggcgg ataatgaaag
     2221 ggttatgacc gtttcatggt ctgtcaatgg aaaatcgtct gaaggccgtt atcacgccaa
     2281 tgatgctcaa gctgaggctg aggaaaataa ctcaataggc ttaaagctat gacgagatat
     2341 gaaggtatgt gataattt
//
LOCUS       DASQSL010001541         1644 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_13670, whole genome shotgun sequence.
ACCESSION   DASQSL010001541 DASQSL010000000
VERSION     DASQSL010001541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1644)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1644)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1644
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13670"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            160..1581
                     /locus_tag="VE844_15670"
     CDS             160..1581
                     /locus_tag="VE844_15670"
                     /inference="COORDINATES: protein motif:HMM:NF033572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISKra4 family transposase"
                     /protein_id="HZC02733.1"
                     /translation="MGCAQIISLSEVRARKQWDGLRQNLHARFDQWLDALEQRLPEPD
                     TTLAQVSDLVWQLRQDLTGGLTETILTHAHADEQNRPQAPCPQCERLVTARPSVARTV
                     ETMVGSVQLERPYFYCRLCSKGFYPFDEVLNLAPGHLQLDVQQAAAKTVVEMPYDEAH
                     TFFHDLTGVRMSAERMHTRTHQVAQGLTVLEVAPSREAIEKRIAEVAAGKWRRPVVVL
                     GIDGAFVPTRPESARGRRPGQGRYRAKRPQWKGAWRDAKGFRFYLIDAERIVHLLSWH
                     QVQNEADLGNALKQVKEAGLIPEEKVRLCVICDGAEWIWKHVQALFPNACQVLDYYHC
                     SEYLHKVAKAQYGNSERAQEWAEATLTRLYLGKMGQVLGGLRRMQPTSDEALKAIDNC
                     WVYLSEHRGRTHYRKFRRGGYPLGSGGMESSNKFICHVRLKRSGAWWYEVNSNQMLAL
                     RCAKYNGTFHQVFARHQCQKSEA"
BASE COUNT          361 a          449 c          496 g          338 t
ORIGIN      
        1 gataatctca gaataagaca ggtaaacgat cagcactcaa tggtatgcgc catcacgagc
       61 aagatccaaa cgggagcatt cggtgattct tacaccccat agggacgcct tctataatag
      121 ggacaagcac atttctaccc ctattgcaaa ggactcccca tgggctgtgc gcagattatc
      181 tcgttatccg aggttcgtgc aagaaaacaa tgggacggat tacgccaaaa cctccacgcc
      241 cgctttgacc aatggctcga tgccttagag caacgtctac cggagcccga cacgacctta
      301 gcccaggtca gcgacctggt gtggcagctg cgccaagatc tcaccggcgg cctcaccgag
      361 acgattctca cccatgctca tgctgacgag cagaaccgac cacaggcacc gtgccctcaa
      421 tgtgagcgac tcgtaacggc tcgccctagc gtcgcacgta ctgtggagac gatggtggga
      481 tcggtgcagt tagagcggcc ctatttctat tgtcgcctgt gctctaaggg cttttatccc
      541 tttgacgagg tcttgaactt agccccagga cacctccaac tcgatgtgca gcaggcggcg
      601 gccaagacgg tggtcgagat gccctatgac gaggcgcaca cgttttttca cgatttgacc
      661 ggtgtgagga tgagcgctga acgcatgcat acgcgcaccc atcaagtcgc ccaggggctc
      721 acggtgttgg aggtggcgcc gtcgcgtgaa gcgatcgaaa agcgcattgc tgaagtggca
      781 gcgggtaaat ggcgccggcc tgtggtggtg ctcggcattg atggagcgtt tgtacccacg
      841 cgccccgaga gcgcccgcgg acgtcgtccg ggacaagggc gctaccgagc caagcggcct
      901 cagtggaagg gggcgtggcg tgatgccaag ggctttcgct tttatctgat cgatgcggag
      961 cgcatcgtgc atctgctcag ctggcaccag gtgcaaaacg aggccgacct cggcaacgcc
     1021 ctgaagcaag tcaaagaggc cggcttgatt cccgaggaga aggtgcggct gtgtgtgatt
     1081 tgtgacggcg ccgagtggat atggaaacac gtgcaggcgt tgttccctaa tgcgtgccag
     1141 gtgctcgact attaccattg ttcggagtac ctccataagg tggccaaagc gcaatatggc
     1201 aactcggaac gggctcagga atgggccgaa gcgactctga cccgtctcta cctaggcaag
     1261 atgggacagg tgctgggtgg tttgcggcgt atgcagccga cctccgacga ggctctcaaa
     1321 gcgattgaca attgctgggt ttatctgagt gagcatcggg gccggaccca ttatcgcaag
     1381 tttcgtcgcg gcggctatcc cttgggtagt ggggggatgg aatcgtcgaa caaattcatc
     1441 tgtcatgttc gcttgaaacg ctccggtgcc tggtggtacg aggtcaacag caatcagatg
     1501 ttggcgctgc ggtgtgcgaa gtacaatggc accttccatc aggtgtttgc gcggcatcaa
     1561 tgccagaaat cagaggcgta agaatcaccg aatgctccct ccggcaaccg tgtccgcact
     1621 gtggtcactc ggcttatcga gaca
//
LOCUS       DASQSL010001542         1050 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_148060, whole genome shotgun sequence.
ACCESSION   DASQSL010001542 DASQSL010000000
VERSION     DASQSL010001542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148060"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(95..>1050)
                     /locus_tag="VE844_15675"
     CDS             complement(95..>1050)
                     /locus_tag="VE844_15675"
                     /inference="COORDINATES: protein motif:HMM:NF020130.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HZC02734.1"
                     /translation="RIAATGSYVPEKVVTNNHLAGAWEVARKLHRLLGAEERRAVNDS
                     QACSDLIAEAARRILTTAGVSPLDLDRILVSATPGDFLEPPTASVVQYKLQARCPAVD
                     VKMSCVGWMAGVDYALRCIATGEKRILVLAGTVVSRGDAFHTIMHRAIFGDGAGGVLI
                     EADEHQGFLAGDLWTDGQYYTMINQPHAGSVHPQEIPLGYKGKFYMGPRRVFFETLRH
                     ELAPCVESVLKDAGLSKDDIDVAIVHQPSRRLFEAAIKSLKIPPEKSIQDFHRYGNTI
                     SAELPIALDENIRNGRIKRGDKLLLVTFGAGFNAGAMVLEY"
BASE COUNT          230 a          313 c          281 g          226 t
ORIGIN      
        1 catactggat caaagtatca tgacgcttgg gccttatccc gggaggatgc ctcaggagcg
       61 ggccggctga tcattttggg aaaagcggcg tgactcagta ctcaagaacc atcgctccag
      121 cattaaatcc cgccccgaag gttaccagca acagcttatc gccgcgttta atacggccat
      181 tgcgaatatt ctcatcgagg gcaatcggta gctcagctga aatggtgttg ccatagcggt
      241 gaaagtcctg aattgatttt tccggcggaa ttttcaagct cttgatggca gcttcgaaga
      301 gccttcgact cggctgatgg acgatagcga cgtcgatgtc atccttcgac aggccggcat
      361 ctttcagcac gctttccaca cagggggcca gctcatggcg gagggtttcg aagaagaccc
      421 ggcgcggtcc catataaaat ttccctttgt agccaagagg gatctcctga ggatgcactg
      481 agccagcatg tggctgattg atcatggtat agtactgccc gtcggtccag agatctcctg
      541 ccaggaaacc ctgatgctcg tcggcctcga tcagcacgcc tcccgcgcca tcgccaaaga
      601 tcgcccggtg catgatggtg tggaaggcgt cgccgcgcga cacgacggtg ccggccaata
      661 ccaaaatccg cttttccccc gtcgcgatgc atcgcaaggc atagtccacc cccgccatcc
      721 aacctacaca agacatcttc acatcgacgg ccggacagcg cgcctgaagc ttatactgca
      781 ccacacttgc cgttggtggc tcgagaaaat ctcctggcgt cgcactgacg aggatcctat
      841 ccagatcgag gggagagacc ccggctgtgg tcaaaatcct tctggcagct tccgcgatga
      901 gatcagaaca agcttgactg tcattcactg ccctccgctc ttccgctccc aggagcctgt
      961 gaagcttgcg ggcgacctcc caagctcctg ccagatgatt gttggtgacg accttctctg
     1021 gcacatagga gcctgtagca gcgattcgcg
//
LOCUS       DASQSL010001543         1484 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_116491, whole genome shotgun sequence.
ACCESSION   DASQSL010001543 DASQSL010000000
VERSION     DASQSL010001543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1484
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116491"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            202..720
                     /locus_tag="VE844_15680"
     CDS             202..720
                     /locus_tag="VE844_15680"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HZC02735.1"
                     /translation="MERVSDVEGRLGRSEARLQQVSSKADVALSRLDHLRLERRVVLN
                     LKDGAQFAFDSTAMTEAARRQIDRFVDEFGANREVPFVVVGHTDNVGSEDYNFELGQK
                     RATGVARYLIGRKGIDPLRVMAVSCGASAPLADNTNHEGRRKNRRIEILVYQESISSS
                     PGKQRLDLVPAG"
     gene            1263..>1484
                     /locus_tag="VE844_15685"
     CDS             1263..>1484
                     /locus_tag="VE844_15685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02736.1"
                     /translation="MASRGPTTAADKTQSWVMSISKPARPWHGLVRHLCVSLDHRIYL
                     QREERECSCGRDYTPIHFDGDTSLEQIHGE"
BASE COUNT          321 a          372 c          450 g          341 t
ORIGIN      
        1 cggcataccg ttcggagagt atagcgctag gcattatgac aggctcctcc tctcgaacga
       61 cacacatgag gtacagtgac gagacgacat ctcagtgggt ttggctctat cgttttgtct
      121 agtgcaagct tattgactgt cctctgtctg tccggatgcc tagcgaccca aagttgggta
      181 cagcggcaaa tgagccctgt ggtggaacga gtatccgatg tcgagggacg ccttggccgg
      241 agcgaagccc ggctgcagca ggttagcagt aaggctgatg tggcattgag tcgtctcgat
      301 catctgcgtt tggagaggcg ggtagtcttg aaccttaaag acggagctca atttgccttt
      361 gattccacgg caatgacaga ggcagcccgt aggcagatcg atcgctttgt cgatgagttt
      421 ggagccaacc gcgaggtgcc cttcgtcgtt gttggtcaca ctgataacgt tggatccgaa
      481 gactacaact ttgagctggg ccagaaaagg gctaccggcg tcgcaagata cctcatcggt
      541 cggaagggaa tagatcccct ccgggtgatg gctgtttcct gtggagctag cgctccttta
      601 gcggataaca cgaaccatga ggggcggcgc aaaaaccggc gtatcgagat ccttgtttat
      661 caggagagca tttcctcgtc accgggaaaa caacgcctcg acctcgtgcc agcagggtag
      721 gtatgtacca gtgtgacttt cgactctagt acacgtgctc ctaatgggag tgagagccct
      781 attcagtcga tggatggaat cggcaagcca tcgatccttt ggggtcacca ggcgcatttt
      841 gcctgcagaa acgcggccag ggcagaagcc cacgaagcca ttctgggctg atgcacgtta
      901 ccgctgacgg tttgggggtg cgagcgtcgc tggggccttt caatgcctct aggctatgaa
      961 agaaggtaca aacaagatgt gtgtatactc cctctgtgtc acgcccctta agttgctgat
     1021 ggcgctaggg tatcggacac tcgcaaccgg atcggttcgg taggcagatc gcggcgatcc
     1081 tcaagcgtgt ttcagggata cccatctccc ctgggtatta agggtattgg ctgtcgtatg
     1141 gcttagcaag ggaagggttt gagcaatagg tggtggtggc atactttttt gaccgtctca
     1201 cgtgctagcg ctcactgctg acttgtacgc cacacggacg gaggtgcggc agggcgtgat
     1261 ggatggcatc gagaggtccg acaacggccg ccgacaagac tcaaagctgg gtgatgtcga
     1321 tctccaagcc tgcgaggcct tggcatggat tggtgcggca tctgtgcgtt tcgcttgacc
     1381 accgcattta tctccagcgg gaagaacgcg aatgttcatg cggccgtgac tatactccaa
     1441 tccacttcga cggcgacact tcgttggagc aaatccacgg agag
//
LOCUS       DASQSL010001544         1261 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_116503, whole genome shotgun sequence.
ACCESSION   DASQSL010001544 DASQSL010000000
VERSION     DASQSL010001544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1261
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116503"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            109..222
                     /locus_tag="VE844_15690"
                     /pseudo
     CDS             109..222
                     /locus_tag="VE844_15690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012166116.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            468..935
                     /locus_tag="VE844_15695"
     CDS             468..935
                     /locus_tag="VE844_15695"
                     /inference="COORDINATES: protein motif:HMM:NF024776.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC02737.1"
                     /translation="MRTAIPRITERTDELKYRLQREHDSHKKLRLQMLSLLASGQAHT
                     RQDVAHLLGVHRNTIGRWLAIYAAGGVDALLATYVPAGKPISLAPGVLASLEQALYRP
                     DGFASYEALRQWVRQTHGVEVKYKTLYRIVRTRFRAKLKVPRPSHTKKAGGHP"
     gene            997..>1261
                     /locus_tag="VE844_15700"
     CDS             997..>1261
                     /locus_tag="VE844_15700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02738.1"
                     /translation="MRVFSQDESRFGLLTVRRRRLTACGVQPVGLIQHVFEWFYVYGA
                     VAPTTGERFFLELPYLNSAMFQLFIDAFAQAFPDSLNILLLDNS"
BASE COUNT          260 a          378 c          363 g          260 t
ORIGIN      
        1 atgaagctcg gcaagtgggt agtgttatag aggtcatgct ctgctcgtaa tcgtatggta
       61 tggttggcca gccccatcaa ctgagctatg ggaggccgac agagcgctat ggtcgtgaga
      121 gacgcgtgtc cagcgtgtgg agcccagcac ttcaagaaaa ctggccacag acacacgggg
      181 aagcagaacc atcgaggcaa ggattgtggg cgacaattcg tcgtgcaccc tgaaaaccgc
      241 ctgattgatg aggaccgacg cactctcgta ccacgcttac tctgtgagaa catctccctg
      301 catggtatct gtcgcgcggt gggcgtcagt atccggtggc tcatggactt catgggcgcc
      361 tgttttgaca cggcccccga gcacttatat gacttctagt tgaagaatat gcatattgct
      421 gttatcctcc cccacctcag caatgaggct gggcgggagg acagctaatg cgtacagcca
      481 taccgcggat tactgagcgg acggatgagc ttaaataccg cctgcaacgt gaacatgaca
      541 gccataagaa gctccgcctg cagatgctct ccctcttggc cagtgggcaa gcccacaccc
      601 gccaggacgt ggcccaccta ctgggggtcc accgtaacac catcggccgc tggttggcga
      661 tctatgccgc cggaggcgtg gatgcattac tggccaccta cgtgcctgcg ggaaaaccga
      721 tctccctcgc gccaggcgtg ctggccagcc tcgagcaggc cctctatcgt ccggacggct
      781 tcgcgtcgta tgaggcgctg cgccaatggg tccgacagac gcatggtgtg gaggtcaagt
      841 acaaaacgct ctaccgcatc gtgcgcacgc gcttccgggc gaagcttaaa gtgccgcgcc
      901 ccagtcacac aaaaaaagct ggaggccatc cctgagttcc aggtcacgtg tcgcgagcgc
      961 ctgcagcgcg tcatccctcc cgagaaccgc cgtccggtgc gggtgtttag ccaagacgaa
     1021 agccggttcg gcttgctgac ggtgcgccga cgtcggttaa cggcctgtgg tgtccaaccc
     1081 gtggggctca tccaacatgt cttcgaatgg ttctacgtct atggggcggt ggcacctacc
     1141 accggcgagc gcttcttttt agaactgccc tatctgaact cggctatgtt ccagctcttc
     1201 atcgatgcct ttgcccaagc attcccggac agcctcaata tcctgctctt ggataacagc
     1261 g
//
LOCUS       DASQSL010001545         4738 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_50633, whole genome shotgun sequence.
ACCESSION   DASQSL010001545 DASQSL010000000
VERSION     DASQSL010001545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4738
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50633"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1047)
                     /locus_tag="VE844_15705"
     CDS             complement(<1..1047)
                     /locus_tag="VE844_15705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011785776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM domain-containing protein"
                     /protein_id="HZC02739.1"
                     /translation="MIDISLSALFAGLLILIALSAFFSGSETAMMALNRYRLRHLANQ
                     KHKGAMRANVLLERPDRLIGVILLGANFVQILASSLATVIALRLFGEAGIAIAAASMT
                     LVMLVFGEVTPKTLGALHPERIAFPSAYVLRPLLVLLYPLVWLINGLTNSILRSLGIR
                     VEDAEGLPLSREELRTVVQEAGALIPGRHQQMLLSILDLEKMNVEDIMVPRNEIVGID
                     LADDLATVEDQLNACRHTRLLVYRGSIDNVLGILHVRQIPRLYPDERLNLKVLEEGLS
                     EPYYVPLGTPLHSQLANFQRRQQRLGLVVDEYGDIEGLVTLEDILEEIVGKFTTDPQA
                     FSRDTFVEEAGTYLI"
     gene            complement(1131..1940)
                     /gene="ccsA"
                     /locus_tag="VE844_15710"
     CDS             complement(1131..1940)
                     /gene="ccsA"
                     /locus_tag="VE844_15710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002683025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HZC02740.1"
                     /translation="MNTLGISLVAILLYLAAAFRIGISLLRGSTIGSAKVHMLVLGLV
                     AVSLHGIILYQAIITGTGLNLGIFNAASLVTWLIAAFILLASLLKPLENLAIVLLPLA
                     ALALGLEFLFPSLRLLPEDAPLGLRIHVILSLLAYSLLTIAALQALALAFEDRLLRQR
                     RPLRMMRILPPLQTLEFSMFQIIAFGFFLLSLGLISGLMFLKDMFAQHLVHKTVLSII
                     AWLVFAILLWGRHRFGWRGRTAIRYALSGFGSLMLAYFGSKLVLELILHRV"
     gene            2053..3411
                     /gene="ffh"
                     /locus_tag="VE844_15715"
     CDS             2053..3411
                     /gene="ffh"
                     /locus_tag="VE844_15715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013031991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HZC02741.1"
                     /translation="MFDNLTQRFSRIVKDLRGHGRITEEHLNITLREVRLALLEADVA
                     LPVVRAFTEHVRSRALGAEVIGTLTPGQAVIRIVRDELTSLMGEAVPLNLNTSPPVVV
                     LVAGLQGSGKTTSVAKLARRLREQEGKSVLVVSCDVYRPAAIDQLAILAQEVEVGFFP
                     AGDSRDPVSIALAALSHARKQFHEVLLVDTAGRLHIDQAMMAEIQRLHQALAPAETLF
                     VVDSMMGQDAVNTARAFNEALPLTGVILTKTDGDARGGAALSVRHVTGKPIKFMGTGE
                     KTPALEPFYPDRVATQILGMGDILGLIEEVERTVDRDKAYDLAQKLKKGQGFDLEDFR
                     EQIRQMEKAGGLSNLITKLPGMTEIPPEMLEQVNNRDVMKIGAIIDSMTRYERRFPAI
                     IRGSRKRRIASGSGTEVQDVNRLLKQFAQMQKVMKQMSKKGGLAKLMRTMGRIAPRGL
                     PF"
     gene            3426..4193
                     /locus_tag="VE844_15720"
     CDS             3426..4193
                     /locus_tag="VE844_15720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZC02742.1"
                     /translation="MPEYAIEVEGLSKWYGQVQAVKGIRFTVAQGATCALLGANGAGK
                     TTTLAMLLGLLAPSAGQIRLLGQDLLTHRYRLLPRMNFSSPYVDLPQRLTVAENLTVY
                     ARLYGVSKPKQRIAQLGEDLEFTPFMQRPYRTLSAGQKTRVMLAKALLNRPELILLDE
                     PTASLDPDSADRVRQYLCSYQRQSGATVLLASHNMTEVERIGTEVLMMRAGHIVDQGA
                     PSALIAKYGRTTMEDVFLDIARNGGVAEETLARRAAV"
     gene            4190..>4738
                     /locus_tag="VE844_15725"
     CDS             4190..>4738
                     /locus_tag="VE844_15725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015829390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC02743.1"
                     /translation="MIRIPTHVFSPARIGAMVLRYLYLLRGSWPRILDYAYWPTMQMI
                     LWGFMTQFFATHSAWVVQAAGVLIAAVLLWDVLFRAQLGVSVVFMEELFSRNLGHLFA
                     SPLRPYEFACALVMISLFRTVLGVGSAALLAIPLYHYSIFEMGLPLIVFFTNLVVFGW
                     AIGFIICGLLLRFGLGVENLAWA"
BASE COUNT         1031 a         1347 c         1405 g          955 t
ORIGIN      
        1 gatcagatac gtacccgctt cttcgacaaa ggtatcccgg ctgaacgctt ggggatccgt
       61 ggtgaattta ccgacgatct cctcaaggat atcttccagc gtcactaaac cttctatatc
      121 gccatattca tcgacgacta agcccaagcg ctgctgtcgg cgctggaaat tagccaattg
      181 gctgtgcaat ggcgtaccca gcggcacata atacggttcg ctcaagccct cttctaggac
      241 ctttagattg agcctttcat ccgggtagag acgtgggatc tggcggacat gcaagatgcc
      301 cagcacgtta tcgatgctgc cccggtatac cagcaggcgg gtatgacggc aggcattgag
      361 ctgatcttcg acagtggcga gatcatcggc gagatcgatg ccgacgatct cgttacgcgg
      421 caccatgata tcctcgacat tcatcttttc gagatccagg atgctcaaca gcatctgctg
      481 atgccttcca gggatcaggg ctcccgcctc ttgcacgacc gtgcgcagtt cctcgcgact
      541 caaaggcaga ccctctgcat cctcaacgcg gatcccaagg gatcgtaaga tgctattcgt
      601 cagcccattg atgagccaaa ccagcggata gaggagtacc agcaaaggcc tgagcacata
      661 ggcgctgggg aaggcgatcc gctccggatg taaggcgcct agcgtcttgg gtgtcacttc
      721 cccaaagacc aacataacca aggtcatgga cgcggccgct atggcgatcc ctgcttcgcc
      781 gaagagccgg agcgcaatca ccgtagccag cgaggaagcg aggatctgga cgaaatttgc
      841 accgagcaga ataacgccaa tcagccgatc gggccgttcc agaagcacat tggcgcgcat
      901 cgctccttta tgcttttgat tagccaaatg gcgcagccgg tagcggttaa gcgccatcat
      961 cgcggtttca gagccggaaa agaaggcgga cagcgcgata agtatcaaca ggccggcgaa
     1021 caaagcgctg agagagatgt cgatcaaggg aggagaagca tattagaagc atattaaagg
     1081 taaggtagtg agtgtttata aaatagtttc cggcctgtta agcgatttcc ctataccctg
     1141 tgaaggatta gttccaatac cagcttgctg ccgaaatagg ccagcatcag tgagccgaat
     1201 ccgctcaagg catagcggat cgcggtgcgg ccgcgccagc cgaagcggtg gcgtccccag
     1261 agcagaatag cgaataccag ccaggcaatg atcgacagca cggttttatg cacgaggtgt
     1321 tgggcaaaca tgtctttgag gaacatcaag ccgctgatga gacccaagct caacagaaaa
     1381 aaaccaaacg cgatgatctg gaacatcgag aattccagcg tctgcaacgg gggtaatatc
     1441 ctcatcatac ggagaggacg tcgctggcgc agcagacgat cctcgaaggc cagcgccagc
     1501 gcctgaaggg cggcaatagt caagagacta taagccaaaa gtgaaagtat aacatggatg
     1561 cgcaaaccga gcggggcgtc ttcaggtagg aggcgcaggc tcgggaacag aaactccaaa
     1621 ccaagcgcta gagccgcgag tggcaataat acgatggcca ggttttcgag cggtttaagg
     1681 agtgaggcga gcagtataaa ggcggcgatc agccaggtca cgagcgaggc ggcgttgaat
     1741 ataccgagat ttaagccggt accggtgatt atcgcttggt aaagtataat tccatggagg
     1801 ctcacggcta ccaaacccag gaccagcatg tgcactttgg cggatccgat ggtagagccg
     1861 cgcaagaggc tgataccgat cctgaaggcc gcagccaggt acaacagtat agccacgagg
     1921 cttataccca gggtattcat gtccgcataa tgacataatc ccaaagagga gagaagagtt
     1981 ccccgagcgt ggtaagatcg gcattattct atttgagaca catttcccca ttacccagga
     2041 atttcaaccc caatgtttga taatctgacc cagcggttca gccgcatcgt caaggatctt
     2101 cgtggtcacg ggcggatcac ggaggagcat ctcaatatca ccctgcgcga ggtgcgtctg
     2161 gccttattgg aggccgacgt cgccctgccg gtcgtgcgcg cctttaccga acatgtgcgc
     2221 tcacgcgcgc tgggggctga ggtcatcggc acactcaccc ctgggcaagc ggtcatccgg
     2281 atcgtgcgcg acgaattgac gagcctcatg ggcgaggccg ttcctctgaa tctcaatacc
     2341 tcgccgcccg tggtagtcct ggtggcgggc ttacagggtt cgggcaagac cacgagtgtc
     2401 gcgaagctgg cccgccgtct tcgggagcag gagggcaaat cggtcttggt cgtaagttgc
     2461 gacgtctacc ggccggcggc gatcgatcag ctcgcgatcc tggcccagga ggtcgaggtc
     2521 ggtttctttc cggccggaga ctcgcgcgat cccgtgtcga ttgctttagc ggcgctcagc
     2581 catgcccgca agcagtttca tgaggtcttg ctggtcgata ccgccgggcg tttacatatc
     2641 gatcaagcga tgatggccga gatccagcgc ctccaccaag cgctcgcacc ggcggagacc
     2701 ctgtttgtgg tcgacagcat gatgggccag gatgctgtga acacggcccg ggccttcaat
     2761 gaggccttgc ccttgaccgg cgtgatcttg accaaaaccg acggtgatgc ccggggtggg
     2821 gcggcgttat cggtgcggca cgtgaccggc aaaccgatca agttcatggg gaccggggag
     2881 aagaccccgg ccctggaacc cttctatcct gaccgggtcg cgacccagat cttggggatg
     2941 ggagatatcc tggggctgat cgaagaggtg gagcgcacgg tcgatcggga caaggcctac
     3001 gatctggcgc agaagctcaa gaaaggccag ggctttgatc tcgaggattt ccgcgagcag
     3061 atccgccaga tggagaaggc aggcggcctc agtaacctca tcaccaagct tccgggtatg
     3121 acggagatcc ccccggagat gctcgagcag gtcaacaacc gggatgtgat gaagatcggc
     3181 gccatcatcg attctatgac ccgctacgag cgccgcttcc cggccatcat ccgaggttcg
     3241 cgcaagcgcc ggatcgcgtc aggatcgggg accgaggtcc aggacgtcaa tcggctcttg
     3301 aagcaatttg cgcagatgca aaaggtgatg aagcagatgt caaagaaggg ggggttagcc
     3361 aagctgatgc ggaccatggg ccggatcgcc ccgcgcggcc tgcccttttg acctacccct
     3421 ttaacatgcc agaatacgct atcgaggtcg agggcctcag caaatggtat gggcaggtcc
     3481 aggcggtcaa ggggatccgt ttcacggtgg cccagggcgc gacctgtgcc ttactcgggg
     3541 ccaatggcgc aggcaagacc acgacccttg ccatgctgct gggattactc gcaccgagcg
     3601 caggacagat ccggcttttg ggtcaagatc tgctcacaca ccgctatcgg ctcctgcccc
     3661 ggatgaactt ctcttccccg tatgtcgatc tgccccagcg tctgacagtg gccgagaatc
     3721 tgaccgtgta cgcacgtctc tatggcgtaa gcaagcccaa gcaacggatt gcgcaacttg
     3781 gcgaggatct cgagttcacg cccttcatgc agcgccccta ccggacgctg tcggcgggtc
     3841 agaagacccg ggtgatgctg gccaaggccc tcttgaaccg gcccgagctc attttactgg
     3901 atgaaccgac ggcctcgctc gatcccgaca gtgccgatcg ggtccgccag tatctctgta
     3961 gctatcagcg ccagagcggc gccacggtgc tgctcgcctc ccacaacatg accgaggtcg
     4021 agcggatcgg taccgaggtc ctcatgatgc gcgcgggcca catcgtcgat caaggcgctc
     4081 caagcgcgct catcgccaaa tacggccgca cgaccatgga agatgtattt ttggacatcg
     4141 ctcgtaacgg cggtgtcgct gaggagaccc tcgcccgccg cgccgctgta tgattaggat
     4201 cccaacacac gttttctcgc cagcgcgtat cggggcgatg gtgctgcgtt atctgtatct
     4261 cttgcgcggc tcctggcccc gcatcctcga ctacgcctac tggcccacca tgcagatgat
     4321 cctatggggg tttatgaccc agttttttgc cacccatagc gcctgggtcg tgcaggcggc
     4381 aggggtgctg atcgccgcgg tgctgctttg ggatgtgtta tttcgggcgc aactcggggt
     4441 ctcggtggtc ttcatggaag aattgttctc gcgcaacctc gggcatctct tcgcgagccc
     4501 cttgcgtccc tatgaattcg cctgcgcctt ggtcatgatc agcctgtttc gcaccgtgct
     4561 tggggtcggg agcgccgcac tcttggccat tcccctctac cactactcga tcttcgagat
     4621 gggcttaccg ctcatcgtct tttttaccaa cctggtggtg ttcggctggg ccattggctt
     4681 tataatctgc gggctcttgc tgcggtttgg ccttggagtt gagaatctgg cctgggcc
//
LOCUS       DASQSL010001546         1899 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_35536, whole genome shotgun sequence.
ACCESSION   DASQSL010001546 DASQSL010000000
VERSION     DASQSL010001546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1899
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35536"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..308
                     /locus_tag="VE844_15730"
     CDS             <1..308
                     /locus_tag="VE844_15730"
                     /inference="COORDINATES: protein motif:HMM:NF013362.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HZC02744.1"
                     /translation="SKGPALIDAMVRQQGAILGHLSRFVKSSGLLVYITCSTEPEENQ
                     RLVESFLERHGDFELEPVASYLPVAARVFAQRGGWFQTWPGHDGLDGFFGARLRRRG"
     gene            353..1300
                     /locus_tag="VE844_15735"
     CDS             353..1300
                     /locus_tag="VE844_15735"
                     /inference="COORDINATES: protein motif:HMM:NF015734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HZC02745.1"
                     /translation="MKRLLKVLTTVALLILLGALTALITVRLTVTREGVVVPDLVGKD
                     LVVALEVSNKQGLSLKVADKAFNPSTPANHIISQEPRPGGWLKPESIIRVVVSKGMGE
                     LPIPAVHGVNWRDAKATLERYGLRLGEMIRVHSDRAAGDTVIAQSPPANSKIVKGGTV
                     TLLVSDGPWQVSYVMPDLRGQPQHTANALATAVGLRVEKVSYTDRPEARAGSVVAQKP
                     APGQRVAAGQGVELVLAKRESTPTNSVGTFTLFQHRVQAGSGPRRVQIIVSNADEQRQ
                     VFNQVRDAGGEVRVLVKVRGDTMARVYYDGVLVEEKHIE"
     gene            1676..>1899
                     /locus_tag="VE844_15740"
     CDS             1676..>1899
                     /locus_tag="VE844_15740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005813193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle receptor subunit
                     alpha"
                     /protein_id="HZC02746.1"
                     /translation="MFTGLSSRLEEVFRRLKSRGKLTEANIREALREVRLALLEADVN
                     YGVVKDFIERVREKAVGTEVLQSLTPGQQVV"
BASE COUNT          400 a          517 c          580 g          402 t
ORIGIN      
        1 ggagtaaggg gcctgcgctc atcgatgcga tggtacgcca acagggtgct atcctgggac
       61 atctcagccg ttttgtgaaa tccagcggcc tcctggtcta cattacctgt tcaaccgaac
      121 ccgaggagaa tcagcggctc gtcgaatcat ttttagagcg acacggcgat tttgaattgg
      181 aaccggtcgc gagttatctc cctgttgccg cccgcgtctt tgcgcagcgg ggggggtggt
      241 ttcaaacgtg gccggggcac gatggcttgg atggcttctt cggggcgcgt ttgcggcgca
      301 gaggataaac ccccataata gaccgcctga cggcaagcgg aacgccattc ccatgaagcg
      361 tctgttaaaa gttttgacga cggtagccct gctcattctg ctcggagccc tcaccgcact
      421 tatcaccgta cggttaaccg tcacccgtga aggggtcgtc gtccccgacc tcgtcgggaa
      481 ggacttggtc gtagcccttg aggtatccaa caagcagggc ctcagcctga aggttgccga
      541 taaggctttc aacccttcga ccccagccaa tcacatcatc tcccaagagc cgcgcccagg
      601 gggctggtta aagcccgaga gcattattcg ggtcgtggtg agtaaaggca tgggggagtt
      661 gcccattccg gcggttcatg gtgtcaattg gcgggatgcg aaggctacct tagaacgtta
      721 cgggctacgc ctcggggaga tgatacgagt ccattctgat cgggctgcag gtgacaccgt
      781 catcgcccaa agtcctccag ccaattcaaa gatcgtaaaa ggcggtaccg tgacgttgct
      841 cgtgagtgat ggcccgtggc aagtaagcta tgtcatgccc gacctgcggg gccaaccgca
      901 gcacacagct aatgcgctgg ccacggccgt tggtctccgt gtcgagaagg tgagctatac
      961 ggatcgtccg gaggcacggg cgggtagtgt ggtcgcccag aaaccagcgc cagggcaacg
     1021 tgtcgcggca ggacaggggg tggaattggt gctcgctaaa cgcgaatcta cccctaccaa
     1081 tagcgtaggg acctttacgc tgtttcagca ccgagtgcag gctgggagcg gaccacggcg
     1141 cgtgcagatc atcgtctcga atgcggatga gcaacggcaa gtcttcaatc aggtccgcga
     1201 cgccggggga gaggtgcggg tgttggtaaa agtgcgaggt gacaccatgg ctagagtgta
     1261 ttacgacggc gtcctggtgg aagaaaagca cattgagtag ctcggaacac tgctgctgtc
     1321 cgctgacctt ctagtgctgc gcatgcctga acaggattga cgcggtcatg gacttcaaat
     1381 ccatggcgca tcggagtgta tgaggcagta gaacccctca gcatactgtc tggctactta
     1441 ggtgggttga gcctcggcac gatgcgacac cgcccacatt ggtccggccc cacgtccgac
     1501 tcaagcgaat tcttgcgccg tccataaagc cctaaaccct cgttgacact tgacagggag
     1561 ggcggcattt catacactgg ttcccactct tcggccggtg aagagacgtc ttaagtttgc
     1621 atccttcatc tcgtggctgc cgtttgcctg ggcagttttg atatgaggag tccacgtgtt
     1681 tacaggactt tcatcccgac tcgaagaggt ctttcggcgg ctcaagagcc ggggcaagct
     1741 gactgaagcc aatattcgcg aagccctgcg tgaggttcgg ctggcactcc ttgaagccga
     1801 cgtcaattac ggagtcgtga aggacttcat tgagcgcgtg cgtgaaaaag ccgtcggcac
     1861 tgaagtgttg caaagtttaa cccccggaca gcaggtcgt
//
LOCUS       DASQSL010001547         1326 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_190442, whole genome shotgun sequence.
ACCESSION   DASQSL010001547 DASQSL010000000
VERSION     DASQSL010001547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1326
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190442"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1326)
                     /gene="fusA"
                     /locus_tag="VE844_15745"
     CDS             complement(<1..>1326)
                     /gene="fusA"
                     /locus_tag="VE844_15745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010961602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HZC02747.1"
                     /translation="GVVDLIKMKLIHWDESSQGIKFEEKPIPDGMVGFCSEWRDKMVE
                     AAAEATDELTEKYLEQGELTPEEIKQGLRMRTLRNEVVPVLCGSAFKNKGVQALLDAV
                     IEYLPSPVDVPPITGILEAGIPDQRIAADNAPYASLAFKIATDPFVGTLTFFRVYSGI
                     LNSGDTVYNPIKGRKERIGRLLQMHANTREEIKEVRAGDIAAAVGLKEVTTGDTLCDI
                     NKVITLERMEFPDPVIAVAVEPKTKADQEKMGMALSKLAAEDPSFRVHTDEESGQTII
                     SGMGELHLEIIVDRMKREFKVEANVGKPQVAYRETIRKVVEKAEGRYVRQTGGRGQYG
                     HVILRLEPLEQGTGFEFVNGIVGGVVPREYIPAVEKGIREQLNNGVLASFPVVDVKVT
                     LYDGSYHEVDSSEMAFKIAGSMGFKEGVKQGKPVLLEPVMKVESVTPEEY"
BASE COUNT          288 a          427 c          298 g          313 t
ORIGIN      
        1 gtactcctcg ggcgtcaccg actcaacctt catcaccggc tcgagcaaca ccggcttacc
       61 ctgttttacc ccttctttaa accccatcga gcccgcgatc ttgaacgcca tttcgcttga
      121 atcgacttcg tgataggagc cgtcgtagag ggtgaccttg acatccacca ccgggaaact
      181 ggcaagcacg ccgttattta gctgctcacg gatacccttt tcaaccgcgg gtatatattc
      241 cctaggcacg acaccgccca cgataccatt gacaaactcg aaccctgtcc cctgctccag
      301 gggttccaag cgcaaaataa catggccgta ttgaccccgc ccaccggtct ggcggacata
      361 cctaccttcg gctttctcca ccaccttgcg gatcgtctcc cgataggcca cctgtggttt
      421 acccacattc gcctccacct tgaattcacg tttcatccta tcgacgatga tctcaaggtg
      481 cagctcaccc atacccgaga taatggtctg cccggattct tcatcggtgt ggacccggaa
      541 agaagggtct tcagcggcaa gcttggagag cgccatgccc atcttttcct ggtcggcttt
      601 agtttttggc tcgaccgcaa cggcgatcac aggatcggga aactccatcc gctcgagcgt
      661 gatcaccttg ttaatatcac agagcgtatc tccggtggtg acctccttaa gtcccaccgc
      721 cgcggcgata tctcccgcac gaacctcctt tatctcttca cgggtattgg catgcatctg
      781 caaaagccgc ccgatgcgtt ccttccgtcc cttgatggga ttatagacag tatcccctga
      841 attcagtatc cctgagtaga cccggaaaaa ggtcagggtt cccacaaacg gatcggtcgc
      901 gatcttaaag gctaaagacg cataaggggc attgtctgcc gcgatacgct gatccgggat
      961 acccgcttcg agaataccgg tgatgggcgg cacgtcaacg ggggagggca agtactcaat
     1021 aaccgcatcc agcaatgcct gaaccccttt gttcttaaag gcggatccgc ataataccgg
     1081 caccacctcg ttgcgcagcg tacgcatcct caacccctgc ttgatctcct cgggggtaag
     1141 ctcaccctgc tccaaatatt tttcagtaag ctcatcggtg gcttccgctg ccgcctccac
     1201 catcttgtca cgccattccg agcagaatcc caccatccca tccgggatcg gcttctcttc
     1261 aaactttatt ccttgggagg attcatccca gtgaataagc ttcattttga tgagatccac
     1321 cacacc
//
LOCUS       DASQSL010001548         1806 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_161089, whole genome shotgun sequence.
ACCESSION   DASQSL010001548 DASQSL010000000
VERSION     DASQSL010001548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1806
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161089"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1806)
                     /locus_tag="VE844_15750"
     CDS             complement(<1..>1806)
                     /locus_tag="VE844_15750"
                     /inference="COORDINATES: protein motif:HMM:NF013676.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3 family transposase"
                     /protein_id="HZC02748.1"
                     /translation="AFSAGGQRVMIAAMLEAAHSKDIIADIINVGIEALVRARFELPA
                     FSALLRAAGKARAQVNRRYYEQVYNALDDRQKTLIIHLLTRAEDETKSPWHRLKQEPK
                     QPTPKHMRDFIQHLRWLQSLNSAYQVLDTVPETKLQRFVDEARALNVNRMNEMQPTKR
                     LTLTVALIRARTAQALDDLAEMFVRRISKLHQRADEALQNYRLGHQAQTDELITLLAN
                     LLDGWRQAESWAERLRRLNALIGDNADALRERCDVYLSYAGNNYLPFLPRLYKSQRGL
                     YVEALALLQPTSTSTDKALEQAIAFLLQQRTARAQRLSVTCKVRDAVESRLDLSWVPQ
                     RWWKAVTGLNRRDVIVETVDRRYFELCVFSCVMLELKSGDLFIAGSERFGDYRTQLIG
                     WEDYERHVVSYCEQAGISADPTQFVEHLKTWLSDAIHTLDVAFPDNAAVTIKDGEPVI
                     RRLEKQAEPENFGLINRLLSERLPERNLLDMLADTEHWLNWTRLFGPLSGFEARIDSP
                     RERYVTNTFCYGCYLGPSQTARAMKDIDRRHVAYVNQYHVTEQNLLNANVEVINAYNR
                     FKLPKLWGSGESASADGTKWDVYEQNLLSEYHIRYG"
BASE COUNT          342 a          505 c          553 g          406 t
ORIGIN      
        1 gccgtagcgg atgtggtact cgctgagcag gttctgttcg tagacatccc atttggtgcc
       61 gtcggccgac gcgctctcac ctgaacccca cagcttgggc agtttgaagc ggttataggc
      121 attgatgact tcgacgtttg cattgagcag gttctgttcg gtgacatggt attggttaac
      181 gtaggcgacg tggcgtcggt cgatgtcttt catcgcgcga gcggtttgcg acggccccaa
      241 gtagcatcca taacagaacg tgttggtcac atagcgctcg cggggggagt cgatgcgcgc
      301 ctcaaagcct gacagcggcc cgaagaggcg ggtccagttc aaccagtgct cggtatcggc
      361 gagcatatcc agaaggttac gctcgggtag acgttcgctg aggagccggt tgatcaaccc
      421 aaagttctcg ggctcagctt gcttttccag gcggcggatg accggctcgc cgtctttaat
      481 cgtcaccgcc gcgttatcgg gaaaggcgac atcgagcgtg tggatggcat cgctcagcca
      541 ggtttttaaa tgctcaacga attgtgttgg gtcggccgag ataccggcct gctcgcagta
      601 gctcacgacg tgccgttcgt agtcctccca accgatgagc tgagtacggt agtcgccaaa
      661 gcgttcgctg ccggcaataa agaggtcgcc cgacttcagc tccagcatca cgcaggaaaa
      721 cacacagagc tcgaagtagc gtcggtcgac ggtttccacg atgacatcgc gccggttgag
      781 gccagtcacc gctttccacc agcgttgagg gacccacgac aaatccagcc tgctttccac
      841 agcgtctctc accttgcacg tcaccgaaag ccgctgtgcc cgggccgtcc gctgctgtag
      901 taggaacgca atagcttgtt ccagcgcttt gtctgtgctg gtagaggtcg gctgcaacaa
      961 ggccagcgct tcaacataaa ggccacgctg gcttttatac agcctcggca gaaacggcag
     1021 ataattgttg ccggcatagc tgaggtacac gtcgcagcgt tcgcggagcg catcggcatt
     1081 atcaccgatc agcgcgttga ggcgcctcag gcgctcggcc cagctctcgg cttgtcgcca
     1141 gccatccagg aggttggcca acagcgtgat cagttcatcg gtctgtgctt gatgaccaag
     1201 gcgataattc tgtaacgctt cgtcagcacg ctggtgcagt ttgctgatcc gacggacgaa
     1261 catctccgcc aggtcatcca gagcctgggc ggtgcgcgcc cggatcagcg cgacggtgag
     1321 cgtcaaccgc ttagtcggtt gcatctcgtt catgcggttg acgttaaggg cgcgggcctc
     1381 gtcgacaaag cgctgtagct tggtttcggg tacagtatcc aggacttgat aggcgctgtt
     1441 taacgactgt agccagcgca ggtgctggat aaagtcccgc atgtgcttag gtgttggttg
     1501 cttgggttcc tgttttagcc ggtgccaggg gcttttggtt tcgtcttcgg cgcgcgtcag
     1561 caggtgaatg atcagcgttt tttgacgatc gtcgagggcg ttatagacct gttcgtagta
     1621 acggcggttg acttgcgcgc gcgccttgcc agccgcgcgc agcagcgcac tgaacgccgg
     1681 cagctcaaag cgggcccgta ccagcgcttc aatgccgacg ttaatgatgt cggcgatgat
     1741 atctttgcta tgtgccgctt cgagcatggc agcaatcatg acgcgttggc caccggcgct
     1801 gaacgc
//
LOCUS       DASQSL010001549         1308 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_105613, whole genome shotgun sequence.
ACCESSION   DASQSL010001549 DASQSL010000000
VERSION     DASQSL010001549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1308
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105613"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..167)
                     /locus_tag="VE844_15755"
     CDS             complement(<1..167)
                     /locus_tag="VE844_15755"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: protein motif:HMM:NF015647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HZC02749.1"
                     /translation="MSLFIGLMSGTSMDAVDAALVAFTDDKAQLLEFHPLPVPKDLGA
                     DLVLLCDPGVR"
     gene            complement(172..741)
                     /locus_tag="VE844_15760"
     CDS             complement(172..741)
                     /locus_tag="VE844_15760"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HZC02750.1"
                     /translation="MSAGTLAFIDPASDFSDGLQVLQAYHDSFLQHGRQLLALMEVIV
                     AQGLDEQRALEVGRLSRYYAEITRLHHRDEERIVFPLILNKSFVIDGMIERLALDHED
                     IEAAWAELHGALQAPERIMSSEQSLTWARRFERGLREHIEREDLDFFPEIERWLSPDQ
                     RAKAGRRMAQLRTHSRLTRVEPEQLPSMP"
     gene            complement(757..>1308)
                     /gene="narI"
                     /locus_tag="VE844_15765"
     CDS             complement(757..>1308)
                     /gene="narI"
                     /locus_tag="VE844_15765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019898578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009325 - nitrate reductase complex
                     [Evidence IEA];
                     GO_function: GO:0008940 - nitrate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0019645 - anaerobic electron transport
                     chain [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="respiratory nitrate reductase subunit gamma"
                     /protein_id="HZC02751.1"
                     /translation="GSNLFHIGILAIFFGHLFGLLIPHQVFTALGISDLAHQHLAIWI
                     GSLFGIMCLIGGVLLWRRRMFNPRVRATSRFMDIFILTWLLITLGLGLSTIPFSLYDA
                     LHGNATEMVLLTRWVQSIATLQPDPAYLDGVRLIYKIHLFFGLTVFLLFPFTRLVHVW
                     SAPITYLWRPYQIVRTKFVHYHR"
BASE COUNT          337 a          362 c          370 g          239 t
ORIGIN      
        1 aagcggaccc caggatcaca aaggaggact aaatctgcac ccagatcctt gggaacgggt
       61 aacgggtgaa actcgagcag ttgggcctta tcgtcggtga aggcaaccag cgccgcgtcc
      121 acggcatcca tgctggtgcc agacatgagg ccaatgaaca aggacataga cttaaggcat
      181 actaggtagt tgttcaggtt ccactcgagt taaccggctg tgcgttcgta gttgggccat
      241 tcgccggcct gccttggcgc gttgatccgg cgaaagccag cgctcgatct caggaaaaaa
      301 atccagatcc tcccgttcga tatgctctcg caggccacgt tcaaatcgcc gtgcccaggt
      361 cagggattgc tccgatgaca taatgcgttc tggcgcttgc aatgcgccgt gcaactctgc
      421 ccaggccgcc tcgatgtcct catgatccaa cgccagccgc tcgatcatgc catcgatcac
      481 aaacgactta ttgaggatca aagggaacac gatccgctct tcatcccgat gatgcaggcg
      541 ggtgatctcg gcgtagtaac ggctcaagcg cccgacctcc agggctcgtt gttcatcaag
      601 gccttgcgcc acaatgactt ccatcagcgc caggagttgt cttccatgct gcaggaaact
      661 atcgtggtag gcttggagaa cctgcaagcc atcgctgaaa tccgaggctg gatcgatgaa
      721 cgcaagagta ccggcagaca tgcgcgcgcc acccggtcaa cgatgatagt ggacaaattt
      781 ggtgcggaca atctggtagg gccgccacaa ataggtgata ggcgcgctcc agacatgcac
      841 cagtcgcgta aacgggaaca gtaaaaatac cgtcaggccg aagaagagat ggatcttgta
      901 gataagcctc accccgtcca gataagcagg atccggttgc aaggtcgcga tgctttgcac
      961 ccaacgggtc agcagcacca tctccgtggc attcccgtgc aaggcgtcgt agagtgaaaa
     1021 gggaatggtc gaaagcccaa gccccagggt gatcaataac caggtcagga taaagatatc
     1081 cataaaccgg ctggtggccc gcacccgggg attgaacata cgtcggcgcc ataataggac
     1141 gccgccgatc aggcacatga tcccaaacaa ggagccgatc cagatggcca gatgctgatg
     1201 ggcgagatcc gagatcccca gggcagtaaa cacctggtga ggaatcagca gtccgaacaa
     1261 gtgaccgaaa aagatggcga ggatgccgat gtgaaacaga ttgctgcc
//
LOCUS       DASQSL010001550         1141 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_116536, whole genome shotgun sequence.
ACCESSION   DASQSL010001550 DASQSL010000000
VERSION     DASQSL010001550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116536"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..289)
                     /locus_tag="VE844_15770"
     CDS             complement(<1..289)
                     /locus_tag="VE844_15770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007917574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02752.1"
                     /translation="MDPTTLFCPNPHCPARGQTGRGNIGLHSQKDHRCICHVCHKTFS
                     ATKGTVLYRLRTSAETVVIVVTLLAHGCPVQAIVAAFGFDERTVADWWARAG"
     gene            complement(631..>1141)
                     /locus_tag="VE844_15775"
     CDS             complement(631..>1141)
                     /locus_tag="VE844_15775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02753.1"
                     /translation="LKESDGVPVLLRAYLKRHGTVAHNLILLTIDQQHIPVVDPQRQY
                     DITSLGANVWTIVAHFGFMQQPDIPRILLEANRHPALLHLDLSVVNIEVGEEEVIIDP
                     DTPWYRQLWVRAFLVQLWLSTPAHRYFGLQWNHPLSAYLSKTVVPVFVHPTGASVYVP
                     DRDKNLELA"
BASE COUNT          268 a          319 c          324 g          230 t
ORIGIN      
        1 gaccagcgcg tgcccaccaa tcggcgaccg tccgctcatc aaacccgaaa gctgccacga
       61 tcgcttgcac agggcatcca tgggcgagca aggtcacgac gatcaccacg gtctcggccg
      121 aagtgcgcag ccgatacaag acagtgcctt tggtggcgct gaacgttttg tgacacacgt
      181 ggcagatgca ccggtggtcc ttctgcgaat ggagaccaat attgccccga cctgtttggc
      241 ctctggcagg acagtgcgga ttggggcaga atagggtcgt ggggtccatg gtgtgtctcc
      301 tcctctggcg ttgctgggca gcatgccaag aaggagtatg tcaggacccc atttacattc
      361 caactgaacc gcaccacggt ttagtggaga gctacccgga gacagaacag tatcaaaaac
      421 ctctgttatc tggacgacac ttttcaagcc acctctgtcc gcatgtttca ggctggcgac
      481 gaagccacaa acccgtctca aaatcacggt ctcaaaactt cacagcatca gtgagttctg
      541 gtacaaaggt ggtatgaaat tggcccattt cgtcacacga gccgggaacg tcatacgcgg
      601 ccgacacagg cgtcagggat accgacacgc ttaggccagc tccaggtttt tatccctgtc
      661 aggcacgtag actgacgcac cggtaggatg cacaaagacc ggcacgacgg tctttgacag
      721 gtacgccgac agcggatgat tccattgtaa gccgaagtac cgatgggctg gggtcgataa
      781 ccacaactgc accagaaacg cgcgcaccca gagttggcgg taccatggcg tgtccgggtc
      841 aataatcacc tcttcttctc cgacttcaat gttgaccacg gacagatcga ggtgcaagag
      901 cgctggatgg cgattggctt ccagcaaaat gcgtgggatg tcaggctgtt gcataaaccc
      961 gaaatgggcc acaatcgtcc agacattcgc gcctaaggac gtaatgtcat actgccgttg
     1021 aggatcgacc acggggatat gttgctggtc aatggtcagc aggatcaggt tatgggcgac
     1081 ggtgccgtgc cgctttaagt acgcccgcag caggacgggc accccatcgc tctctttgag
     1141 g
//
LOCUS       DASQSL010001551         1838 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_79026, whole genome shotgun sequence.
ACCESSION   DASQSL010001551 DASQSL010000000
VERSION     DASQSL010001551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1838)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1838)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1838
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79026"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1585)
                     /locus_tag="VE844_15780"
     rRNA            complement(<1..1585)
                     /locus_tag="VE844_15780"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          336 a          598 c          457 g          447 t
ORIGIN      
        1 caggaacgca ccatgtccaa taggcacgct gaggttgccg ctctgggtcc cctgtgactt
       61 caacggaacg tgggtaggga cggaatacta accgtctgtc catcgcctac gcctttcggc
      121 ctcggcttag gcccgcctaa ccctacgcgg atgaccctac cgtaggaaac ctcgggtttt
      181 cggtgggccg atttctcatc ggcctttacg ctactcatgc cggcattcgc acttcccacc
      241 gctccaccgt gccttccgac acgacttcac agctgtggga acgctcccct accacccggt
      301 ggtaaaccac cggatccgcg gcttcggtgg atggcttgag ccccggtaca ttgtcggcgc
      361 cgcgccactc gaccagtgag ctattacgca ctctttaaag ggtggctgct tctaagccaa
      421 cctcctggct gtctgggcaa cacgacatcc tttgacactt agccatcact ttgggacctt
      481 aaccggcggt ctgggctgtt tcccttttga cgacgaagct tagcccccgc cgtctcactc
      541 ccggagcgtg ccgcgctggc attcgcagtt tgcatgggtt tggtaagcgg ttagccccct
      601 agcccaaaca gagctctacc tccaacgctg gtaatctccg aggctgcccc taaaggcatt
      661 tcggggagaa cgagctatct ccgagttcgc ttggaatttc tcctctatcc acaggtcatc
      721 ccaaggtttt gcaacacccg caggttcggc cctccagtcc gcattaccgg accttcagcc
      781 tgcccatgga tagctcacac ggtttcgcgt ctaccccccg cgactctgac gccctgttca
      841 gactcgcttt cgctccggct ccggttgtca ccaaccttag ccttgccacg gaggagtaac
      901 tcgccggctc attcttcaat aggcacgcca tcacgcgtac gggacgaacc cgtacggacg
      961 ctctgactgt ttgtaagcgc acggtttcag gtactatttc actcccctcc cggggtactt
     1021 ttcacctttc cctcacggta ctggttcact atcggtcgct agggagtagt tagccttacg
     1081 aggtgggcct cgcaaattca cacggaattc ctcgggctcc gtgttacttg ggaacaccac
     1141 cgggaggtca gtcggttttc gtctacaggg ctattacctt ctttggccta actttccaga
     1201 aagtttgtct aaccgttgac tttgtaactc cctgatcggt ctgacgcccg atcaagtggg
     1261 tcccacgacc ccaccaaggc aacgccgtca ggctttaaca ccttgatggt ttgggctgaa
     1321 cccgtttcgc tcgccgctac tctgggtctc gttatttact ttctcttcct cgggttactt
     1381 agatgtttca attcacccgg ttccctccac aggccctatg tgttcagacc tgggtaccag
     1441 cgcattacca ctggtgggtt tccccattcg gacatccccg gatcaatgga tgtttggctc
     1501 ctacccgggg cttttcgcag cctaccgcgt ccttcgtcgg ctcctagcgc caaggcatcc
     1561 gccgtacgcc cttaataact tggcattgat gctcgcgctc gctatggagt ttccaaagtt
     1621 ctggtcgtgc cagaagagtt ctggcccggt cttcaatccg ttctcagggc aaaaaattcc
     1681 cgcctaccga agtcggtggc gggggcgctt gagcaggtca aagacccgag ctaagcggag
     1741 tgccccctga acgagttgat caaaatcgag tcctttccct tccgaacagc ctcgccattc
     1801 tagggacgag gcgcacctca gtcaaccgag ggcacaca
//
LOCUS       DASQSL010001552         1207 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_134394, whole genome shotgun sequence.
ACCESSION   DASQSL010001552 DASQSL010000000
VERSION     DASQSL010001552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134394"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..614
                     /locus_tag="VE844_15785"
     CDS             <1..614
                     /locus_tag="VE844_15785"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HZC02754.1"
                     /translation="DLYRATRWAAGLGQVVAWILIGCGFAMIFGIRVPFFGTGVVGGM
                     WIALIGWFLNNAAIMSYRQLLVQRSMEHVPVSRIMLSQFDTVAPDMPISTLIEDYIMR
                     SDQRAFPVVENGRLVGLVCLEDVRRVDPTQRATLAVRAIMTPAHALTTVTPEEASTEA
                     LQALSRREVNQLPVVKHGTVRGLIRREDILKWLSLHGEQAVAR"
     gene            644..>1207
                     /locus_tag="VE844_15790"
     CDS             644..>1207
                     /locus_tag="VE844_15790"
                     /inference="COORDINATES: protein motif:HMM:NF024882.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HZC02755.1"
                     /translation="MVSLKNLANSSSNWIRLDTVAQAIRKNSPPVSLLRRQVARRLKE
                     GILIVLVAVALIILIALLSYDPVDPGWSHTGGSGPISNKGGLVGAWLADVLLYLFGYS
                     AYLLPFMIASIGWLLYQGHLAQGRKGLLSFDYFHLFTRSTGFLLIITMGCGLAWIHLE
                     GGMDLPHRAGGIVGDVVGREMIAMLGLL"
BASE COUNT          215 a          336 c          379 g          277 t
ORIGIN      
        1 gcgatctcta ccgcgccacg cgttgggcgg cgggcctggg gcaagtggtc gcgtggatcc
       61 tcatcggctg tggcttcgcc atgatcttcg gtatccgtgt tcctttcttc gggacgggcg
      121 tggtgggcgg aatgtggatc gcgctgatcg gctggttctt gaataacgcg gcgatcatga
      181 gctatcggca attgctcgtc cagcgctcga tggagcacgt accggtgtcg cggatcatgc
      241 tgtcccagtt cgacacagtg gcgcccgata tgcccatcag cacactcatc gaggactaca
      301 tcatgcgctc ggaccaacgc gcattcccgg tcgtggagaa cggccggctg gtcggactcg
      361 tgtgcctgga agatgtgcgc cgggtcgatc cgacccagcg cgcaacgctg gccgtgcgcg
      421 cgatcatgac acccgcgcac gcgctcacca cggtgacccc ggaggaagcc agtaccgagg
      481 cgttgcaggc gctgtcgcgc cgtgaggtca atcagttacc cgtggtcaag catgggaccg
      541 tgcgcgggct gatccgccgc gaggatattc taaagtggct tagcttgcac ggcgagcagg
      601 cggtggcgag gtagtccttg tcacttcatt gaccgccggg gcaatggtat cattaaagaa
      661 tctagccaat tcctcatcaa actggatacg tttagatacg gtggcacaag caatacgcaa
      721 aaattctccc ccggtttccc tccttcgccg gcaagtggcg cgccggctca aggagggaat
      781 attgatcgtc ctggtcgcag ttgccctgat tatcctgatc gcgcttttaa gctatgaccc
      841 tgtcgatccg ggatggtctc ataccggtgg gagcgggccg attagtaaca aaggcggtct
      901 ggtaggggct tggctagcgg acgtgctgct ttatctgttc ggctattcgg cctatctgct
      961 ccccttcatg atcgcctcta taggatggct gttatatcag ggccatctgg cccagggacg
     1021 caagggtctt ctcagctttg attatttcca tctattcacc cggagtacag gatttctatt
     1081 aatcatcacc atggggtgcg ggcttgcctg gatccacctc gaggggggta tggatctccc
     1141 tcatcgcgcc ggcgggattg tgggtgatgt agtgggcagg gagatgatag cgatgctggg
     1201 cctgctc
//
LOCUS       DASQSL010001553         1748 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_148147, whole genome shotgun sequence.
ACCESSION   DASQSL010001553 DASQSL010000000
VERSION     DASQSL010001553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1748)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1748)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148147"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1398
                     /locus_tag="VE844_15795"
     CDS             <1..1398
                     /locus_tag="VE844_15795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02756.1"
                     /translation="FWVSRFFVWFQFACISWAWVCIINRAFDNPFNNLTKLFIALVSF
                     AASVHYFVLTAWHTIDGLFLASIGVWILLARKHARWRVIGYLLIATAYLCKQSFLLMA
                     PLSVLLLGDWREKKYWITITLPAVGYCAYLLVTGTFSEAVLQLASQSGLVSTGVGSYL
                     NFGFLLGILAGYCAMFLFSASAVPLLPTSHAPRYAGASILIAMPAAFIAIGLYRGSLA
                     AVSFGVVGMVLGIVLYLAWRRTGQGEDKVSVSLLALLLAWSASLSVGYNFPALLLGPL
                     FTILAAFVYSRRESLNPRFLQTTLAIAGVAILLGFAVARPYYIYREQPSSELTESLDG
                     VLPGGRLIYTNPNTYEFLVDLDNAADMISERNRTYAIIPDVPGHWVQSEQTNPLLVDW
                     PQPVELGNQYLIDRVTSDLAAKRGEVTVLVQKVHAFYLAEGSVPLDDDQYAVVQYVRA
                     NFSKTHETEFFEFYE"
BASE COUNT          335 a          449 c          502 g          462 t
ORIGIN      
        1 ttctgggtat ctcgtttctt tgtatggttc caattcgcgt gcatcagctg ggcctgggtg
       61 tgcatcatca accgcgcttt cgataaccct ttcaacaacc tcacgaagct atttatagcg
      121 ttggtaagct ttgccgcttc agttcactac ttcgtactta cggcgtggca tacgatcgat
      181 ggtctgttcc tggcgtcgat tggggtgtgg atactcctgg cgcggaagca cgccaggtgg
      241 agggttatcg gctatctatt gatcgccacc gcttacctgt gcaagcaaag ctttttgctc
      301 atggctccgt tatccgtact gcttctgggc gattggcgag agaaaaagta ttggataacc
      361 ataactctgc ccgcagtcgg ttactgcgct tatctgttgg ttacgggaac tttctcggaa
      421 gccgttctac aactggcttc gcagtcaggc ttggtctcta cgggtgtggg gagctacctg
      481 aacttcgggt tcttgctcgg aattttggca ggatattgcg cgatgttcct gtttagcgca
      541 agtgctgtgc cactgttacc taccagtcac gcaccgaggt acgccggagc atcgatactg
      601 atagcaatgc cggcggcttt tatagcgatc ggactgtacc gggggagtct cgcagcagtg
      661 tctttcggcg ttgttgggat ggtactcggc atagtactgt acctcgcttg gaggagaaca
      721 gggcaaggtg aagacaaagt atcggttagc ttgctggcct tgttgttggc gtggagcgct
      781 tcattgtcgg tgggatacaa ctttccggct ctactgttgg gacccttgtt caccatacta
      841 gcggcgttcg tgtattccag gcgtgaatcg ctcaacccca ggttccttca gacgacgttg
      901 gctattgcag gggtggcaat tttactgggt ttcgccgtgg ccaggccgta ctacatatac
      961 cgggagcagc catccagcga gctaaccgag tcgttggatg gggtgctccc gggtgggcgc
     1021 ttgatctaca ccaacccgaa tacttacgag ttcctggtcg atctcgacaa tgccgcagat
     1081 atgatttcgg agaggaacag gacgtacgcg atcattccgg acgttcccgg gcattgggtc
     1141 caatcggagc agacgaaccc tctgctcgtg gattggcccc aaccggtcga gttgggtaac
     1201 cagtacttaa tcgatcgtgt cacgagcgat ctggctgcta agaggggaga ggtaaccgtt
     1261 ctagtccaga aggtgcatgc cttctatctg gcggaggggt ctgtaccttt ggacgacgac
     1321 caatatgctg tggtgcaata tgtgcgcgca aacttcagca aaacccatga gaccgagttc
     1381 tttgagtttt acgagtgaac cttcgcctca aacccctgct tccactgctc tcacagtagc
     1441 ttttgtagta ccggcgaagc ttgcggtttc cgcctcctct taagtagagc tcgtcgagta
     1501 gggacggttc gatcaggtcc ttcgcgtgcg gaaccgggtt ggcttttcga gttgcgccat
     1561 cagtccttcg ggtagggcgg caacgtgggt gttggcgagg acggcggcca gagaattcaa
     1621 gcgttgcccc agaactgctc gttcatcaca ggcaaataag atcatacttt agggcgtgct
     1681 gtatcctcct ttcggtggat gtcctagccc gtccaccgtg cgagactctc gcatcctcat
     1741 cctccgtg
//
LOCUS       DASQSL010001554         1057 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_91404, whole genome shotgun sequence.
ACCESSION   DASQSL010001554 DASQSL010000000
VERSION     DASQSL010001554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91404"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..148)
                     /locus_tag="VE844_15800"
     CDS             complement(<1..148)
                     /locus_tag="VE844_15800"
                     /inference="COORDINATES: protein motif:HMM:NF024736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02757.1"
                     /translation="MNPRPPYSTDITDTEWKLIKPYVPEAKPGGRPEAYPKREILNGI
                     FYLLR"
     gene            complement(417..944)
                     /locus_tag="VE844_15805"
     CDS             complement(417..944)
                     /locus_tag="VE844_15805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02758.1"
                     /translation="MRKSIKESKGLTPLPAPVPPILAQAIGYTGGARFVAFNWTPYGD
                     KAEYFDGRRSATGNWQAFLAYIQHPVVSPLLEEYDLGSSESEAKHCLVLDREKLELFI
                     ASVKEARVFLTEQWPPDPPLRMSQDEYVAKVSEILRHVKPPDTMDIEEVQRRIDEQYA
                     LIEQMQQWLDRHLKN"
BASE COUNT          219 a          292 c          293 g          253 t
ORIGIN      
        1 tgcggagcag atagaagatc ccgttgagga tctcgcgctt ggggtatgcc tctggccgac
       61 cgccgggctt ggcctcgggc acatagggct tgatcaactt ccactctgta tccgtgatgt
      121 cggtcgagta aggtggtcga gggttcatac ccccgagggg cactgatctc gacacgcgag
      181 ggcgagcttt ttagacacac tctcagctcg actttggcca ttctcgtccc aaccaggtag
      241 caggaaaatg gcagctagct gagggctcga tggcaggggc atgggaggcg gcgtaatttc
      301 gcgatctcta ccttcccacc agacttcatc gaatttccgg acggcgcctg cccgctcttg
      361 cctggtctgc agagggttga ttcctgaatg gccaaagtcg agtataagtt atctcactaa
      421 tttttcaaat gcctatcaag ccactgctgc atctgttcga tcaaagcata ttgctcgtca
      481 attctgcgct ggacttcctc gatatccatc gtatccggtg gtttcacatg cctcaatatt
      541 tcggacactt tggccacata ctcgtcctgg ctcatgcgga ggggcggatc tggcggccac
      601 tgctccgtca gaaagacacg ggcttctttc acagacgcaa tgaagagctc gagtttctcg
      661 cgatcaagaa ctaggcagtg tttggcttca ctctcactac tgcccaagtc gtactcttca
      721 aggagggggc tgacgaccgg gtgttggata tacgcaagaa aggcctgcca gttgccagtc
      781 gcactccggc gaccatcaaa gtactcggct ttatcaccat agggggtcca gttgaaggcg
      841 acaaagcgcg cgccccctgt atagccgatg gcttgagcca gtatcggagg gacaggcgcc
      901 ggcagtggtg ttaatccctt agactccttg atggattttc tcatacaaga aaaagacggc
      961 tatctcgccg gttttgccta agaggcttcg ggtttgcaat gcttgcagtg ccggcagttc
     1021 atcggacagg ccgccaaccg ccagccctcg ggctttt
//
LOCUS       DASQSL010001555         1373 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_35638, whole genome shotgun sequence.
ACCESSION   DASQSL010001555 DASQSL010000000
VERSION     DASQSL010001555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1373)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1373)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1373
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35638"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(507..>1373)
                     /locus_tag="VE844_15810"
     CDS             complement(507..>1373)
                     /locus_tag="VE844_15810"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HZC02759.1"
                     /translation="RQTAIDRFQAYLERRQFSAHTITSYTLDLRLFFTEVAVPLAQVS
                     FREVDQFVEHQHQHGRSWATINRRLNAMKHFFDVCLDQQLVAGNPVKPSHFVRRGRPL
                     PKALSREQVQRLFGRIDHPMDRALFLVMLRCGLRVSEAAQLKLAHIDWEQQALQIAQG
                     KGRKARRVYLSPDAIASVQRCLEQHPGERAHGYVFWNRKRPARPLSVKAIQKKMERYA
                     KAAGITASCHSLRHTFASNLLEHGAEVVTIRDFLGHSQIASSERYAKVSSQKIKQEYM
                     RTMQKILKQGQV"
BASE COUNT          269 a          408 c          410 g          286 t
ORIGIN      
        1 aagggatcag cagcggatgg tgccttcctt tcgctgcagc ccccgtgcag gggaccagat
       61 gacgttaggc ggccgggctc atgatggacc tgcagcaggg aggctgtggt gtgacccggt
      121 aagcccagtc gtgtaacgtg agaattgccg tcttatcggt tggcactggc actcttgtgt
      181 gaaaatcgcc gctcgtccac cctttttccc tgagatctgc cgtcagaact accggttctc
      241 tctattatgt agacaataac tcaactccga caatagcatc tatctccttg tgaatgagga
      301 ctgtttcccc ttaagggccc cgccgagggg cgcaacccga tcagcacccc tgttatgtgc
      361 gacaattgac catccctcct cctgttatga acgaccatcg tggttatcgc cgacaatgcc
      421 acttgggcca gcagggtgag cgggagccgc acctacacaa tcgtggcata gagtctttca
      481 taccttccgg caggagtgcc gctcactcag acctggccct gcttcaggat tttctgcatg
      541 gtgcgcatat attcctgctt aatcttctga ctcgagactt tggcatagcg ctcgctcgag
      601 gcgatttgac tatgccccaa gaagtcgcgg atcgtgacca cctcggcccc gtgctccagg
      661 agattcgagg caaaggtatg ccgcaggctg tgacagctgg ccgtgatgcc cgcggctttg
      721 gcgtagcgct ccattttctt ttggatagct ttcacggaga gcggccgcgc cgggcgcttg
      781 cgattccaaa acacatagcc gtgggcccgt tcacccggat gctgctccag gcaccgttgc
      841 acactggcga tggcatcggg cgacagatag acgcgccgag ctttgcgccc tttgccctgc
      901 gcgatctgca gggcctgctg ctcccagtca atatgggcga gcttgagctg cgccgcctcc
      961 gagacgcgca gcccgcagcg gagcatcact agaaacaggg cccgatccat cggatggtcg
     1021 atccggccga agagccgctg gacctgctcc cgggagagcg ctttgggcag gggccgcccg
     1081 cgtcggacga aatgactggg cttgacggga ttgcccgcga cgagctgctg gtcgagacac
     1141 acgtcaaaaa aatgcttcat ggcattgagc cgtcggttga tggtcgccca cgatcggccg
     1201 tgctgatgct ggtgctccac aaactggtcg acctcacgaa aggagacttg agcgaggggg
     1261 acagccacct ccgtaaagaa gagacgcaga tcgagggtat agctcgtgat ggtgtgcgcc
     1321 gagaactgtc ggcgctccag gtaagcctga aaccggtcaa tcgcggtctg acg
//
LOCUS       DASQSL010001556         1352 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_148166, whole genome shotgun sequence.
ACCESSION   DASQSL010001556 DASQSL010000000
VERSION     DASQSL010001556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1352
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148166"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1286
                     /locus_tag="VE844_15815"
     CDS             <1..1286
                     /locus_tag="VE844_15815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02760.1"
                     /translation="LAEDYEEAVRQRFALALAELQEEGAKTIAVLPLILSDADPHLKK
                     ARRLLATLNPSLPFAPPLAKDYLAAQILEDRAKALSQAPAKERLVVVGFGATRSEEAE
                     AIGQDLERLLREVKERLPFQGTTVAILFHPAAEEAVLREGNSKAEDAIRTAASGPLRT
                     VVVPFHLGFKHTKSMELGRKIEGIVQGLPIAYDGREILPHANVALWLKKMANRWIKPA
                     REEIGVVIMPHGAGEYVNEPILKAIEPLRRRYNLEVAFGMADVDTLQEAIDKIESRGA
                     RRILVLRLYNVSLSLKEETEYVLGLSNSLPATGHYGGHGNADRLPRVRTGALLSTIGG
                     FDGDPLIAEVLYERVMEVSQAPEQETVILLAHGDGDEDKDRFWHKQMEAEAQYIKAKS
                     ANRFRAIHVATLREDWPDKREKAVTDLRELIAKTG"
BASE COUNT          293 a          369 c          424 g          266 t
ORIGIN      
        1 cactcgccga ggattacgag gaggcggtac ggcagagatt tgccctggcc cttgccgagc
       61 ttcaagagga aggagccaaa acgatcgccg tgctgccctt gatcctttcg gacgctgacc
      121 cgcacttgaa aaaggctaga cgcctgctgg ccacgctcaa tccatcgctt ccctttgctc
      181 cgcccctggc caaggactac cttgccgccc agatcctgga agatagggcg aaggctctct
      241 ctcaggctcc tgcaaaagag cggcttgtcg ttgtcggctt tggggctacg cgctctgagg
      301 aggccgaggc cataggccaa gacctggaac ggctcctcag agaagtcaaa gagcggctcc
      361 ccttccaggg gacgactgtg gctatcctgt tccatccggc ggcagaggag gcggttttgc
      421 gggagggaaa cagcaaggcc gaggatgcta tccgcacggc tgcaagcggt cctttgagga
      481 ctgtggtcgt tcccttccat ctcggcttta agcatacgaa gtccatggag ctaggccgga
      541 agattgaagg gatcgttcag ggccttccca tcgcctatga cggtagggag attttacctc
      601 atgccaacgt ggctctctgg ctgaaaaaga tggccaaccg ttggattaag cctgcacggg
      661 aagagatagg cgtcgtcatc atgccccatg gggccgggga atatgtcaac gagccgatcc
      721 ttaaggccat cgaacccttg cggcggcggt acaacctgga ggtggccttc ggcatggcgg
      781 atgtggacac cctgcaggag gccatcgaca agatagagag ccgcggcgct cggcgcatcc
      841 tggtgctgcg gctctacaac gtttccttaa gccttaaaga ggagacagag tacgtcctgg
      901 ggctctccaa ttcgctccct gctacaggcc attatggtgg ccacggtaat gcggataggc
      961 tgccccgagt aagaacaggg gctttgcttt ctaccatcgg cgggttcgac ggagatccct
     1021 tgattgcgga agtcctttat gagcgggtaa tggaagtgag tcaagcgcct gagcaagaga
     1081 ctgtcatcct ccttgcccac ggcgatggtg atgaggataa agaccgcttc tggcacaagc
     1141 agatggaagc cgaggctcag tatatcaagg ccaagagtgc taaccgattt cgggcgatcc
     1201 acgtcgctac cctgagagag gattggccgg acaagcggga gaaggcggtc acggacctca
     1261 gagagctcat cgccaagacc ggctgaggtg gggggaggat actcgtgatt tccaaccgag
     1321 tggcaggcgc agggccttat cggaagtatc tt
//
LOCUS       DASQSL010001557         3867 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_171002, whole genome shotgun sequence.
ACCESSION   DASQSL010001557 DASQSL010000000
VERSION     DASQSL010001557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3867)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3867)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3867
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171002"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..119)
                     /locus_tag="VE844_15820"
     CDS             complement(<1..119)
                     /locus_tag="VE844_15820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011330254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HZC02761.1"
                     /translation="MTFVVTESCIKCKYTDCVEVCPVDCFHEGPNMLVIDPDE"
     gene            complement(234..2792)
                     /gene="mutS"
                     /locus_tag="VE844_15825"
     CDS             complement(234..2792)
                     /gene="mutS"
                     /locus_tag="VE844_15825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007151870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HZC02762.1"
                     /translation="MQQYLGIKANYPDKLLFYRLGDFYELFYEDAHKAAKLLDIALTT
                     RGISAGAPIPMAGVPVHAVDTYLAKLVRLGESVVICEQVGEPPNATRGLIAREVTRII
                     TPGTVTEAVLLEERKDNLLLAVQVNHDDIGIATLDLTSGRLSLMELQGREALEAELER
                     LQPAELLISATAEGLSFLENRSGLCRRPAGCFDLERSRRALCRQFKVRDLAGFGCEDM
                     KLGLAAAGCLLHYTRDTQRSALPHLQPPKVERREEAIILDAASRRNLELDTPLLGAQE
                     HTLVSLMDTSATPMGSRLLKRWLQRPLRDRAVLQLRHCGVGALIAQQRYEPVHTALHA
                     IGDMERILARIALRSARPRDPAQLRTALDKLPELQRLIQDIDSPLLRSLAAQISAFPE
                     LHTFLAEAIIESPPLLLRDGGVIARGFDPDLDELRNIGRDAGQFLINLEARERQRTQI
                     PTLKVGYNRIHGYYIEVSRSAADRVPADYHRRQTLKTTERYLIPELQAFENRILSAAE
                     RALAKEKALYEQVLDRLIAQLPALQQSSAALAELDVLTTFAERADTLHFNPPELTATP
                     GLHIEAGRHPVVERIQDTPFVPNDLLVDENRRMLIITGPNMGGKSTYMRQAALIVILA
                     HSGSFVPAKRAIMGPIDRIFTRIGAADDLAGGRSTFMVEMTETANILHSATPHSLVLM
                     DEIGRGTSTFDGLSLAWASAEYLAQTIRAYTLFATHYFEMTTLPSEIPGVVNVRLDAI
                     EHGDKLVFMHAVKEGPANKSYGLQVALLAGIPHPVIHGAQARLAHLEQGRLQDIQSLP
                     RQPLELFHEAPDSPLVEALKRLNPDELTPKQALDALYHLRSLLGCSASEREVKC"
     gene            2925..3134
                     /locus_tag="VE844_15830"
     CDS             2925..3134
                     /locus_tag="VE844_15830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02763.1"
                     /translation="MLDLSRYIGLGEREVGLLLAVVMGLLIAGFILVIFLSERSATKQ
                     KTNQAQPFDTNKDKQDPSESQNIEL"
     gene            complement(3157..>3867)
                     /locus_tag="VE844_15835"
     CDS             complement(3157..>3867)
                     /locus_tag="VE844_15835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008291996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HZC02764.1"
                     /translation="LLLADRHRTRLLPHLISLATGTLLGAAFIGLLPHALEEAGAANT
                     HTVTLCVLVGVIAFFLLEKMVIWRHCHDEHCEEHASNPRINPKLAAGTLILLGDGIHN
                     FVDGILIAAAFLTDLKLGIVTSLAIAVHETPQEVGDFAILLDSGFTRRKAFFYNLISS
                     LATVLGALLAWISLPSSTSALPYILAITASSFIYVAVADLIPGLHQRTEIRESVAQVV
                     LITVGISLIYGLDSILHQ"
BASE COUNT          885 a          998 c         1146 g          838 t
ORIGIN      
        1 cattcatcgg gatcgataac cagcatattt ggcccttcgt gaaagcaatc gaccgggcaa
       61 acctcgacgc agtcggtata tttgcactta atgcaggatt cggtaactac aaaggtcatt
      121 gtatggattc acctgtcagt caaagaagta cggactacct tttgtaagaa aaggcacgta
      181 taaaaacata cagtatttat acttatcata atagcatgcc gactcggtcc tcgttagcat
      241 ttaacctctc gttcgcttgc cgaacatccc agcaacgacc gtagatggta cagcgcatcg
      301 agggcctgct ttggcgttag ctcatctgga ttaagcctct ttagcgcctc caccaaaggc
      361 gagtcgggtg cctcatggaa aagctccagt ggctgccttg gaagggattg aatatcctgc
      421 aatctaccct gttctaagtg tgccaaccgc gcttgggctc catggatgac cggatgcggt
      481 atgcccgcaa gcagcgctac ttgtaagcca tagcttttgt tagccggtcc ctccttgact
      541 gcatgcatga ataccagctt atccccgtgc tcgattgcat cgagtcgcac attaacaacc
      601 ccggggatct cactcggcaa ggttgtcatc tcgaaatagt gggtggcaaa gagggtgtag
      661 gcccggatcg tctgggcgag atattccgca ctggcccagg ccagcgacag gccatcgaag
      721 gtgctggtgc cgcgaccgat ttcgtccatt aacacgagac tatgaggggt ggcactgtgc
      781 aggatattgg cggtttcagt catctcgacc atgaaggtgg aacgtccgcc ggcgagatca
      841 tcggctgctc cgatgcgggt gaagatgcga tcgatagggc ccatgattgc acgtttggcg
      901 ggtacaaaac tgccactatg ggccaggatc acgataagcg cggcctggcg catataggtc
      961 gatttcccac ccatattagg accggtgatt atgagcattc ggcggttttc atcgaccagg
     1021 aggtcattgg gcacaaaggg tgtatcctgg atgcgctcga ccaccggatg acgccctgct
     1081 tcgatatgga ggccgggggt agcggttaat tcgggtggat tgaaatggag ggtatcggcc
     1141 cgttcggcaa aggtggtcag gacatcgagc tcggcgagcg cagcgctcga ttgttgcaaa
     1201 gccggtagct gggcgatgag ccggtccagc acctgctcat agagcgcttt ttccttggcc
     1261 aaagcccgtt cagccgcgct caatatccta ttttcaaagg cttgtaactc agggatcagg
     1321 taacgttctg tggtcttcag ggtctggcgg cggtgataat cggctggcac gcgatcggcg
     1381 gcgcttcggc ttacctcgat gtaatagcca tggatccggt tgtaacccac tttaagggtc
     1441 gggatctggg tgcgttgccg ctcgcgtgcc tcgagattaa taaggaattg accggcatct
     1501 cggccgatat tccgcagttc atcgagatcg ggatcaaaac ctcgggcgat caccccacca
     1561 tcacgcagca aaaggggcgg gctctcgata atcgcctcgg caagaaatgt gtgcagttcg
     1621 gggaaggcgc tgatttgagc ggcgagtgat cggagtaaag ggctatcgat atcttggata
     1681 agcctttgca gctcaggtag cttgtctaaa gcagtacgga gttgcgcggg atcgcggggg
     1741 cgggcggatc tgagggcaat gcgcgcgagg atgcgttcca tatcgccgat ggcatgcaag
     1801 gcggtgtgca caggctcgta gcgttgctgc gctatgagcg ccccgacacc gcagtggcgt
     1861 aactgtaaca ccgctcgatc ccgtagtggc cgctgcaacc agcgcttgag caggcggctg
     1921 cccatgggcg tggcgctggt atccataaga cttaccaggg tatgttcctg agcccccagg
     1981 agcggggtat caagctccag gttccggcga ctcgcggcat cgaggatgat ggcttcttcc
     2041 cggcgttcga ccttgggtgg ttgcaagtga ggcagggccg aacgctgggt gtcacgggtg
     2101 taatgcagca ggcagccggc cgcagcgaga ccgagcttca tgtcctcaca gccgaatcca
     2161 gccagatccc gcaccttaaa ttgccggcaa agcgcgcggc ggctacgctc aaggtcaaaa
     2221 cacccggctg ggcggcggca tagaccggag cgattttcta gaaaggagag cccttccgca
     2281 gtggcgctga taagcaattc agcgggttgc aagcgctcga gttccgcctc tagggcttcg
     2341 cgtccttgaa gctccattaa gctcaggcgc ccgctcgtga gatccagggt agcgatcccg
     2401 atatcgtcgt gatttacctg tacggcgagg aggagattgt ccttgcgttc ctccagcagt
     2461 actgcctccg tgactgtacc cggcgtgata atgcgcgtca cctcgcgtgc tatcagaccc
     2521 cgagtagcat tgggaggttc acccacctgt tcgcagatca ccacggactc cccgaggcgg
     2581 acgagcttgg ccagataggt atccaccgca tggacaggca cgcccgccat ggggatgggt
     2641 gccccggcag agatcccgcg ggtagtgagg gcaatatcga gtaatttggc tgccttatgg
     2701 gcatcctcgt agaacagctc ataaaaatcg cccaagcggt aaaacaagag cttgtctgga
     2761 tagttagcct tgatccccag gtattgctgc attaccggag tatgttcggc agggtgagcg
     2821 gtaagcatat tcatggatcc ggtatagccg gttacggctg aatagttaag tatgtgctac
     2881 tctttaaaga tgtacgacca tcttaataaa taggggaagc gagaatgctt gatcttagtc
     2941 gctatatcgg cttaggcgaa agagaggttg gcttgttgtt ggctgtggtc atgggccttc
     3001 ttattgccgg ctttattttg gttatttttc tatcagagcg cagtgcaaca aaacagaaga
     3061 cgaaccaagc tcagcctttc gacactaata aggataagca ggatccatcc gagagccaga
     3121 acatagagtt ataaaggata agcaaagcag cccgtgctat tgatgcaaaa tgctatcaag
     3181 cccatagata aggctgatcc caaccgtgat aagcacaacc tgagccacgg attcccggat
     3241 ctctgtacgt tgatgcaggc ccgggatcag gtcggccaca gcgacataga taaaactcga
     3301 ggccgtgatt gccagaatat acgggagggc ggaggtcgag ctcggcaagc ttatccaggc
     3361 aagcagtgcg cccaagaccg tggcaaggct cgagatcaaa ttataaaaga aggccttgcg
     3421 gcgagtgaag ccgctatcta aaaggattgc aaagtcgcca acctcttggg gggtctcatg
     3481 gacggcgatc gcgagactag taacgatccc cagcttgaga tcggttaaaa atgcggctgc
     3541 gatgagtatt ccatcgacga agttatggat gccatccccg aggagaatca aggttcctgc
     3601 cgcaagctta ggattgatcc ggggattgga ggcatgctct tcacagtgct cgtcatgaca
     3661 atgacgccag atgaccattt tctccaatag gaagaaggct atcacgccca caagcacgca
     3721 cagggtgacg gtatgcgtgt tggctgcgcc tgcctcctcg agcgcgtgcg ggagcagccc
     3781 gatgaaggcc gctccaagca atgtgccggt ggcaaggctg atcaaatgtg gcaacaaccg
     3841 ggtccggtgc cggtcggcca agagcag
//
LOCUS       DASQSL010001558         1076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_66037, whole genome shotgun sequence.
ACCESSION   DASQSL010001558 DASQSL010000000
VERSION     DASQSL010001558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66037"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(101..796)
                     /locus_tag="VE844_15840"
     CDS             complement(101..796)
                     /locus_tag="VE844_15840"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FadR/GntR family transcriptional regulator"
                     /protein_id="HZC02765.1"
                     /translation="MMLKAVKKTRIYEEVVGQLHRLIDEGKLKAGDRLPSERELAETF
                     RVSRSSVREAIKTLEREGLVVARPGSGTFISAVDVESLVAPLASLLSRGKDALIDLFE
                     MRRLVEPGIAALAAERATPADIVRLKEICAAQERQIKHQVSAVESDAAFHLTIGQATH
                     NAALQRLVAAIVEILKPMREQALQTPGRAQKSLASHREILIAIERHDPALAQQAMQRH
                     IEAVEHNVLRISR"
BASE COUNT          205 a          337 c          297 g          237 t
ORIGIN      
        1 gcccacggct ggtggcatat acaggggcat ggcctgggca tctaccatta tgccgtttac
       61 acgcggcaca tagcctaccc caggaagtga cctagcaccc tcagcgcgag atgcgcaaga
      121 cattgtgctc caccgcttca atgtgacgct gcatggcttg ctgcgccaac gctgggtcgt
      181 gccgctcgat ggcgatgagg atctcgcgat gcgacgccaa cgatttctgc gcccggcctg
      241 gtgtttgtaa cgcttgttcc cgcatcggtt tcaggatctc gacgatggcc gcgactaagc
      301 gttggagcgc cgcattgtgc gtggcctgac caatcgtcaa atgaaaagcg gcatcactct
      361 ccacagccga tacctgatgc ttgatttgcc gttcttgagc cgcacagatc tccttcagac
      421 gcacaatgtc cgccggcgtg gcgcgttcgg cagctaatgc cgcaatgcct ggctcgacca
      481 ggcggcgcat ttcaaagagg tcgatcagcg catctttgcc gcgcgacagc agcgaggcca
      541 agggagccac caggctttcc acatccaccg ccgagataaa cgtcccactt cccggcctgg
      601 cgacgaccaa cccttcccgc tcaagggttt tgatggcctc gcgcaccgaa ctgcgactga
      661 cgcgaaaggt ctcggctaac tcccgctcgg aggggagacg gtcacctgcc ttcaacttcc
      721 cctcatcgat caaccggtgc agttgtccaa ccacttcctc gtagatgcga gtcttcttga
      781 cggccttcaa catcatgcct atgacctcta tgttcggtcc gatatattgg tcagaccagt
      841 ataccagtgc tgtgccacct gtcaagcgaa tttctcgccc gttgaccttt gcgtctcttg
      901 cggataggcc attgatgcct atctcattgg ggcggtgcgg ccatcaccac cgtgatgggg
      961 gaacgtttgc agatcgtctg ggctgtgctg ccgatatcga agagacgccg tttactgtgt
     1021 gacccgatga cgatgacatc ggcgcggagt tcttcggcga cgcggatgac ctcctc
//
LOCUS       DASQSL010001559         2124 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_134428, whole genome shotgun sequence.
ACCESSION   DASQSL010001559 DASQSL010000000
VERSION     DASQSL010001559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2124
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134428"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(167..730)
                     /locus_tag="VE844_15845"
     CDS             complement(167..730)
                     /locus_tag="VE844_15845"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02766.1"
                     /translation="MAPDQKKARRTGAEIVFVDETGFSFQATTATTWAPIGQTPILRR
                     LSKRRELSTVMALTLSGRIFKRHFPQAIGGTDMVVALQHFQRHLPGPMIVIWDRSTTH
                     RAVVVKEYRAAHPELHVEWLPPYAPDLNPEEGCHGNVKQHLRNATPVSINELRAQVDR
                     GFARLRQRPDLILGFFRHAGLSVTQLW"
     gene            733..1209
                     /locus_tag="VE844_15850"
     CDS             733..1209
                     /locus_tag="VE844_15850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02767.1"
                     /translation="MPEPGPDKLIVPLLGIEGRALRAPAQGFQAACDIVGMVIYPKLH
                     QNQRPDPTERPTIRVKTGFQRPVLEQGQHLVPLCRRQPRRPAWDAPVFQTPEVAPVLG
                     KALGPSADRHPTDAQLPRNVGLGELVSLQEPPRFEATFFTLCTGEVVRSPYHSRLL"
     gene            complement(1572..>2124)
                     /locus_tag="VE844_15855"
     CDS             complement(1572..>2124)
                     /locus_tag="VE844_15855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02768.1"
                     /translation="NVFDLLHWQVPMQGEGEIRKGDHASFYLVFDKCFEALVTGRLKA
                     LGFDRLDARLQAMYLWFYFESYGKGYEACPMGNAELQERLDCSRNTVRDMLKLLTAYG
                     KNLLGYGIIEALPEFPPFDFKRPQVYRVHLPRIFVGKRIRKLEEEARFQAGQEGFANL
                     RAVLEGDPVTKGILPIIDSEESV"
BASE COUNT          465 a          601 c          609 g          449 t
ORIGIN      
        1 gggtcgcgcc ggaggcggcg caacagacag taaacccgct aacctgggta atataccacg
       61 gcgttgaggg ggtctactcg ctcctctgac gtggcaaaag actggtatac gccgccccgt
      121 gcaccccctc gcctggccgg gcaacggggc taacgtctat tgaccttcac caaagttggg
      181 ttacagagag ccccgcatgc cgaaagaacc cgaggataag atcgggacgc tggcggagtc
      241 gcgcaaagcc gcgatccacc tgcgcccgaa gctcgttaat gctgacagga gtggcattgc
      301 ggagatgttg tttgacgttg ccgtgacaac cctcctcggg gttcaagtcc ggggcgtacg
      361 gcggaagcca ttccacgtgg agctcgggat gcgcggcgcg atactccttc acgacgaccg
      421 cgcgatgcgt ggtggagcgg tcccagatca cgatcattgg tccgggaaga tggcgctgga
      481 aatgttgcag ggccacgacc atatccgtac ccccgatggc ctgcggaaaa tgccgcttga
      541 agatgcggcc cgacagggtc agggccataa ccgtagagag ctcccggcgc ttgctgaggc
      601 gccgtaagat cggtgtctgc ccaatcggcg cccacgtcgt ggcagtcgtc gcctgaaatg
      661 aaaacccggt ctcatcgaca aagacgatct cggcccctgt gcggcgagcc tttttttgat
      721 ccggggccaa tcgtgcctga gccaggcccg gacaagctca tcgttccgct ccttggcata
      781 gagggcaggg cgttgcgggc tccagcccaa ggctttcagg cggcgtgcga catagtgggc
      841 atggtaatct accccaaact ccaccagaat cagcgcccgg acccgacgga gcgtccaacg
      901 atccgtgtca aaaccggctt tcagcgcccc gtattggagc aaggccagca cctggtgcca
      961 ttgtgccgcc gtcagccgcg gcggccggcc tgggatgccc cggtttttca aacccccgag
     1021 gtcgccccgg tgctgggcaa ggcgcttggc ccatctgctg accgtcatcc gactgacgcc
     1081 caactgccgc gcaatgtcgg cttgggagag ctggtcagtc tgcaggagcc gccccgcttc
     1141 gaggcgacgt tcttcacgtt gtgcacgggt gaggttgtgc ggtcgccata tcatagccgc
     1201 ctattgtaac ccagctttgg tgaagctcaa taaatggcca aagtcgagtt gtagatactt
     1261 acggaaaaag ggcaaaagtc gagcttagct gttgtctttg ttgggaggcg tggtgtccaa
     1321 tgcattgagg atggaatata tacggagtac aatgcaatcg gcgcatcaca ggagctggaa
     1381 agcctacgtc tcttctcctc ttgagaaaga gaaatgtctc accaaaaagt tatccacaga
     1441 ctcggctttc aagaatttca ttcagaaaaa ccttagatac ttcttctata tttaagaagg
     1501 ggtcggtttt tgaccctccc ccgggtgagt ttctgaccct ctgccccggt caaaatttaa
     1561 cccggcgaga tttagaccga ctcttctgaa tcgatgatgg ggagaatccc ttttgtgaca
     1621 gggtctcctt cgaggactgc tctcaggttg gcgaagcctt cttgaccggc ttgaaagcgc
     1681 gcctcttctt caagcttgcg tatgcgtttt ccaacgaaga ttctggggag gtggacgcga
     1741 tagacctgcg ggcgcttaaa gtcaaacggc gggaactccg ggagggcttc gataatgccg
     1801 taaccgagca aatttttccc ataggctgtg agaagcttaa gcatgtccct gacagtgttc
     1861 cgtgagcaat caagacgctc ttgaagctcg gcattcccca ttggacaggc ttcgtagccc
     1921 ttgccgtaac tctcgaagta gaaccataaa tacatggctt gcaagcgagc gtcaagccgg
     1981 tcgaatccta atgccttcag cctgccggtc acaagtgctt caaagcactt atcgaacaca
     2041 agataaaacg aggcatgatc gcccttccta atctcgcctt ctccttgcat tggaacttgc
     2101 cagtgaagga ggtcaaagac atta
//
LOCUS       DASQSL010001560         5092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_161132, whole genome shotgun sequence.
ACCESSION   DASQSL010001560 DASQSL010000000
VERSION     DASQSL010001560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 5092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5092
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161132"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..353)
                     /locus_tag="VE844_15860"
     CDS             complement(<1..353)
                     /locus_tag="VE844_15860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02769.1"
                     /translation="MKRVLFLLVCSWVNLLISGLTLAETSDNPPEPYRATLDKDGIQR
                     VQILGGDYFFKPRHIIVKARVPVQLSVSVEPGIKPHDIVIEAPQAGIRVNQKLATAPK
                     TISFTPLVPGKYPFY"
     gene            476..1807
                     /gene="chrA"
                     /locus_tag="VE844_15865"
     CDS             476..1807
                     /gene="chrA"
                     /locus_tag="VE844_15865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014236240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate efflux transporter"
                     /protein_id="HZC02770.1"
                     /translation="MDHTAPDTAPAIGFWQACRYWLKLGFISFGGPAGQIAIMHQELV
                     ERRRWISERRFLHALNYCMVLPGPEAQQLATYIGWLLHSTWGGIVAGALFVLPSWFIL
                     SFLAWLYLAFGHLPAIAGVLYGIKPAVTAIVVFAAYRIGSRALKNGLLWAMAAAAFIA
                     IFAFEVAFPYIVLAAGILGLIGGQIAPAKFTTGDGHLAADKGFGPAYIDDEAPLPEHA
                     RFRLGRLLRFAGIGFSLWAGAFGLLIARYGWQGILSQMAWFFTKAALLTFGGAYAVLP
                     YVYQGAVEHYHWLTGPQMIDGLALGETTPGPLIMIVTFVGFTGAWTNAVFGADSLLLS
                     GIAGGTIATFFTFLPSFLFILIGGPLIESTQGEITLTAPLTGITAAVVGVILNLAVFF
                     AYHVLWPQGLSGPFEWFSALIGMAAFIALFRYQLGIIPVIAGCGGLGLVYS"
     gene            1965..2525
                     /locus_tag="VE844_15870"
     CDS             1965..2525
                     /locus_tag="VE844_15870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HZC02771.1"
                     /translation="MKSLDLTNHFLIAMPSLLDPNFFKTVTLICAHSEKGAMGIVINR
                     PTTIRLGEVLGQMEIVAADSKINDMTIYEGGPVQRDRGFVIYRPLGQWVSTLKINDTY
                     GVATSRDILEAISRGSGPENTLIALGYAGWGAGQLEQELAENAWLSSPAEESILFHVP
                     AEDRWRSAATLLGIEIEYLSDQTGHA"
     gene            2518..2967
                     /gene="ruvX"
                     /locus_tag="VE844_15875"
     CDS             2518..2967
                     /gene="ruvX"
                     /locus_tag="VE844_15875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012969444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HZC02772.1"
                     /translation="MRDPMDLTALGFDYGTHRIGVAAGQTVTGTASPLGIIFVRRNKP
                     DWPSVSALIQRWQPDALVVGLPINMDGTEHELAPAIHRFTRQLRSYYGLPVHTIDERL
                     SSREAQARLAGHHKGKEEVDAVAAQVILETWLSTLIIPQQRSAVLSL"
     gene            2973..3467
                     /gene="pyrR"
                     /locus_tag="VE844_15880"
     CDS             2973..3467
                     /gene="pyrR"
                     /locus_tag="VE844_15880"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008931380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HZC02773.1"
                     /translation="MIGPDEIHSWLSRMAEQLMHDPPKDTAIVGIHTGGVWIAKQLYK
                     RLTVEQPLGELNIAFYRDDFSTIGMHPSVRPSSLPFEVEGSHILLVDDILYTGRTIRA
                     ALNEIFDYGRPAGVRLAVLVDRGGRELPIQADVVGTTLSLPPGEHVKLTGPDPLALVV
                     QKMA"
     gene            3464..4441
                     /locus_tag="VE844_15885"
     CDS             3464..4441
                     /locus_tag="VE844_15885"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007040807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HZC02774.1"
                     /translation="MNAGGIQIDADGRLNHFLSIEGLPHALLLDLLAAAESFAGVGDR
                     PVKKVPLLRGKTIANLFFEPSTRTRTTFELAAKRLSADVLNISIETSSARKGESLLDT
                     LRNLEAMHCDMFVVRHPHSGAAHFIASHVAPHVRVVNAGDGQHAHPTQALLDIFTIRR
                     LKPDFSSLIIAIVGDIAHSRVARSDIHALNILSVPEVRVVGPRTLIPLGIEALGVRVF
                     HDLKAGLRDVDVVIMLRVQHERMQGALLPSAHEYFKLYGLTEDKLELAKPDVIVLHPG
                     PINRGVEIDSAVADGPHSVILQQVSHGIAVRMAVMAMVMGIPLKSAPRV"
     gene            4864..>5092
                     /locus_tag="VE844_15890"
     CDS             4864..>5092
                     /locus_tag="VE844_15890"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HZC02775.1"
                     /translation="MRPRSQGGFTLLELTIVLAIVGLLAVGALKAASALRENAGISET
                     SKRLNTLVMALQTFLMKNNRLPCPADPNIDTN"
BASE COUNT         1005 a         1446 c         1435 g         1206 t
ORIGIN      
        1 cagtagaagg ggtatttccc aggcacaagg ggggtgaagg agatggtttt gggcgctgta
       61 gccaacttct ggtttacccg gatcccggct tggggcgcct cgatgacgat gtcgtgtggc
      121 ttgatccccg gctcgacact cacggaaagc tgtaccggta ccctggcttt tacgatgatg
      181 tgtctgggct taaagaaata atcgccaccg aggatctgta cacgctgtat gccatcctta
      241 tcgagggtgg cccggtaggg ttccggaggg ttgtcggagg tttccgccag cgttagaccg
      301 gagatcagga ggttcaccca ggaacagacg agcaaaaaca gaacgcgctt catggcttta
      361 agcaagaaag ctggggggat agatagccat ttgtattatc ttgtcatggt tgtgggcagc
      421 ttgcaaggct gggaagcgcc ccgctcgatt gccaataggt ttatttgaga gaccggtgga
      481 ccacacggca ccagacacag ctcctgcaat aggcttctgg caagcctgcc ggtattggct
      541 caaactcggc tttatcagtt tcggcgggcc ggcggggcag atcgccatca tgcaccagga
      601 gctcgtggag cgccgacgct ggatctccga gcggcggttt ctgcatgccc tgaactactg
      661 catggtgtta cccggtcccg aggcgcagca gctcgccacc tatatcggct ggctcctgca
      721 cagcacgtgg gggggcatcg tggccggggc gctgtttgtc ctgccttctt ggtttattct
      781 aagcttcctt gcttggctct acctggcgtt tggccacctg ccggccatcg ccggtgtgct
      841 ctatggcatc aagcctgcgg tcaccgcgat cgtggtcttc gccgcctacc ggatcggctc
      901 cagggcgctg aaaaatggct tgctttgggc catggccgcc gctgctttca tcgccatctt
      961 cgccttcgag gtggcctttc cttacatcgt tctggcagcg gggatcctcg gtctcatcgg
     1021 cgggcagatc gcgcctgcca agtttaccac aggcgatggc cacttggcgg ccgataaagg
     1081 ttttggccca gcgtatatcg acgatgaggc gccgctgccc gaacatgccc gttttcggct
     1141 cgggcgttta ctccggtttg ccggcatcgg gtttagcctt tgggcggggg ccttcgggct
     1201 ccttatcgcc cgctatgggt ggcaggggat cctgagccag atggcctggt tttttaccaa
     1261 ggccgctttg ctgacttttg gcggtgccta tgcggtgttg ccctatgtct accaaggggc
     1321 ggtggaacat tatcattggt tgactgggcc gcaaatgatc gatggactgg cgctcgggga
     1381 aaccacaccc ggtccgctta tcatgatagt cacctttgtc ggctttacag gcgcctggac
     1441 aaatgcggtg tttggcgccg attccctgct gttgtcgggg atagcgggcg ggaccatcgc
     1501 cacgttcttc accttcttgc cctcgttttt gttcattttg atcggtggcc cgctcatcga
     1561 atcgacccag ggtgagatca cgctcactgc cccgctcacc ggtatcaccg ccgctgtggt
     1621 gggggttatc ctcaacctcg ccgtgttctt cgcctaccat gtgctgtggc ctcagggctt
     1681 gagcggcccg ttcgaatggt tctctgcgct cattgggatg gccgcattta tagccctatt
     1741 ccgctaccag ctcggtatca ttccggtgat agctggctgc ggcggtctgg gcttggttta
     1801 ctcgtgagca gacctccgat tgtcctctta acgatacgat aatgttttca agagaaacca
     1861 aatgtgagat tatttaaaca tcttttgctg tcgtgctccg agcctcgtaa acaatctcag
     1921 ccggtagagc ggtcatctca attaagatcc aatagtatca ggatatgaaa tcactcgatc
     1981 tcaccaatca ctttctcatc gccatgccca gcctgttgga tccaaatttt ttcaagaccg
     2041 tgaccctgat ctgcgcccat agcgagaaag gcgccatggg tatcgtcatt aaccggccta
     2101 ccacgattcg gctgggcgaa gtgctcgggc agatggaaat agtggccgcg gactcgaaga
     2161 tcaatgacat gacgatctat gaaggcggac cggtgcagcg cgaccgggga tttgttatct
     2221 accgaccgct cggtcagtgg gtatcgacgc tcaagataaa cgacacctat ggtgtggcta
     2281 cctcgcgcga tatcctcgag gctataagcc gcggcagcgg gccggaaaac accttgattg
     2341 cgctcggcta cgccggttgg ggcgcaggac aattggaaca ggagttggcc gaaaacgcct
     2401 ggctgagcag cccggccgag gaaagcatcc tgttccatgt gcctgccgaa gatcgctggc
     2461 gctcggcggc gacgcttttg gggatcgaga tcgaatacct gtccgatcag acgggccatg
     2521 cgtgatccca tggatctgac ggcgcttgga ttcgattatg gcacccaccg gatcggcgtg
     2581 gcggcgggtc aaaccgtaac cggtacggcg agccctttag ggatcatctt tgtgcggcga
     2641 aataagcctg actggccctc cgtgagcgcc ttgatccaga ggtggcagcc cgatgccctg
     2701 gtggtcggct tgcccatcaa tatggatggc acagagcacg agcttgcccc cgcgatccat
     2761 cgctttactc gccagctccg gagctattat ggtctccccg tgcacaccat cgatgagcgt
     2821 ctctcctcgc gtgaggccca agcgcggctt gcgggccatc ataagggcaa ggaagaagtg
     2881 gatgcagtag ctgcccaggt catcctcgag acctggctct ctaccctcat aatcccccaa
     2941 caacgatccg ccgttctatc cctatgagtc gaatgatcgg acccgacgaa attcactcct
     3001 ggctatcacg tatggccgaa cagctcatgc acgatccgcc gaaagacacc gccatcgtcg
     3061 gcatacatac gggcggggtg tggatcgcca agcagttata caagcggctt acggtcgaac
     3121 agcccctggg cgagttaaac atcgcttttt atcgcgacga cttcagcacc atcgggatgc
     3181 atccaagcgt ccggccttct tccctgcctt tcgaggtcga gggcagccat atcctgttgg
     3241 tcgatgatat cctgtatacg ggtcgcacca ttcgcgccgc cttgaacgag atcttcgact
     3301 atggccgccc ggccggcgtc aggcttgcgg tgctggtgga tcgcggcggg cgcgagctac
     3361 ctatccaggc ggatgtggta gggaccaccc tgtccctgcc tcccggagag catgtcaaat
     3421 tgaccggtcc cgatccgttg gcgctggtcg tgcaaaagat ggcatgaatg caggcggtat
     3481 ccagatcgat gccgatggcc gtcttaacca ttttttgagt atcgagggtc tgcctcacgc
     3541 cctgttactt gacctcttgg ccgcggctga atcctttgcg ggcgtgggag accgcccggt
     3601 caagaaggtc cctctgttgc gcggcaagac catcgccaac ctatttttcg aaccgagcac
     3661 ccgcacacgc accacctttg aactggcggc gaaaaggctc tctgccgatg tcctcaatat
     3721 cagcatcgag acctcttcgg cccgcaaggg cgaatccttg ctcgataccc tgcgtaatct
     3781 cgaagccatg cattgtgata tgtttgtggt ccgccaccca catagcggcg cggcgcattt
     3841 catcgcctcg catgtggcgc ctcatgtgcg ggtcgtcaat gccggtgatg gccagcatgc
     3901 ccatccgacc caagccttgc tggatatctt caccatccgc cggctcaagc ccgacttttc
     3961 gagcttgatc attgctattg tcggcgatat cgcccattca cgggtagcgc ggtcggatat
     4021 ccatgccctg aatatcctga gcgtgcctga agtgcgagtg gtcgggccga ggaccttgat
     4081 acccctagga atagaggccc tgggtgtgcg ggttttccac gatctgaagg ccgggcttcg
     4141 cgatgtcgat gtcgtgatca tgctgcgcgt tcagcacgaa cgcatgcaag gcgcactgct
     4201 gccgagcgcg catgagtatt ttaagttata tggcttgacc gaagacaaac tcgagcttgc
     4261 caagcccgat gtgatcgtgc tgcaccccgg tcccatcaat cgcggtgtgg agatcgattc
     4321 agcggtcgcc gatggccccc actccgtgat cctacagcag gtgagccatg gcattgccgt
     4381 gcgtatggcg gtgatggcca tggtcatggg gatcccgctg aagagcgctc ctcgggtcta
     4441 gtagtcaatc gagttgatgc tgataacctc catccctgcc tttccctcac taatcacaaa
     4501 ttttctcatc acaaattttc taatttgtga actaggtcac agtaatttat cttaaattaa
     4561 tctatattaa ttttgtagga agctcttagt tgctcggtgg ctactcactc cccctccccc
     4621 ctatgagtag ccccgggccc ttttttgtga tccctccgta tcgaaacatc tcttccgtat
     4681 cgaaacatct ctagctaaac attcatgact caattgttct ccacgagcac tgcgtgctgt
     4741 aggtaagtgt taagatatca aacagataag tggtatttaa attgcataat cggtctaaat
     4801 aacaccggct gaatgattcc aagcaagcca atttaatata acgatgcgac cgagatcaca
     4861 gggatgcgac cgagatcaca gggcggattt acccttcttg agctgaccat tgtgcttgcc
     4921 atagtagggc tgctcgcagt aggggcgcta aaagccgcca gtgcgctgcg tgagaatgcc
     4981 ggtatctcgg agacttctaa aaggctgaat accctggtca tggctctgca aacgtttcta
     5041 atgaagaata atcggttgcc gtgtccagcg gacccaaaca tagataccaa tc
//
LOCUS       DASQSL010001561         1277 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_148180, whole genome shotgun sequence.
ACCESSION   DASQSL010001561 DASQSL010000000
VERSION     DASQSL010001561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1277
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148180"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            157..432
                     /locus_tag="VE844_15895"
     CDS             157..432
                     /locus_tag="VE844_15895"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02776.1"
                     /translation="MKRRKWDAHTKAMIVIEGLQGKPVAELCTKHQISQSLYYQWRDQ
                     FLAQAAKAFDDPQRSRKEARLQQENARLKQLVGELTLELKKSDELLG"
     gene            429..1205
                     /locus_tag="VE844_15900"
     CDS             429..1205
                     /locus_tag="VE844_15900"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZC02777.1"
                     /translation="MTRQRSPRVVQRDEALLPRIQQLKADHPFWGYRRIWAYLRFVEQ
                     QPVNKKRVLRLMREHHLLVQPNLRLKAKRTPMGSKPRPTKPNEWWGIDMTKVLVAGVG
                     WVYIVIVLDWYTKAVVGHYAGLRCTAQHWLEALDMAVTHQFPQGVRGQGVSLMSDNGC
                     QPTSTTFMQTCATLEIHQAFTSYNNPKGNADTERFMRTLKEECLWLQEWTCPLELRRA
                     LKDWLAQYNDHYLHSTLGYQSPRQFARDYLNRHSSPFAAA"
BASE COUNT          287 a          357 c          390 g          243 t
ORIGIN      
        1 caccctacgg tggatcgttt cgcaacgact tttacccagg gtcagtagtg gacgtgccgc
       61 ggcactcgag gttatgggga caaatatatt gctccctatt aaggcatgag gcgctggaac
      121 ggagtacaca gtggctgaca accaaggagg tcagccatga aacgccggaa gtgggacgcc
      181 cacaccaaag ccatgatcgt cattgagggt ttgcagggca agccggtcgc ggagctgtgt
      241 accaagcatc agatcagtca gtccctctat tatcaatggc gcgatcagtt tctggcccag
      301 gcagccaagg cctttgacga cccgcagcgc agccggaaag aggcgcgcct acagcaggag
      361 aacgctcggc tcaagcaact cgttggcgag ctcaccttgg agttaaaaaa aagcgacgag
      421 ctgctgggat gacgcggcaa cgatctccgc gagtggtcca gcgcgatgag gcactgctgc
      481 ctcggattca gcagctcaag gccgatcatc cgttctgggg ctatcgtcgc atctgggcct
      541 acttgcgctt tgtggaacag cagccggtga acaagaaacg agtgctgcgt ttgatgcggg
      601 agcatcacct gctggttcag ccgaatctgc ggctgaaggc caagcgcacg cccatgggga
      661 gcaaaccgcg acccaccaag cccaacgagt ggtggggcat cgacatgacc aaggtgctgg
      721 tggccggtgt gggctgggtc tatatcgtca tcgtgctcga ttggtatacg aaggcagtgg
      781 tgggccacta tgctgggctt cgatgcacgg ctcagcactg gctggaagcg ctggacatgg
      841 cggtcaccca tcaattcccc cagggagtga gaggccaagg cgtgtcgctg atgagtgaca
      901 acgggtgtca gccgacctcg acgaccttca tgcagacctg cgcgacattg gagatccatc
      961 aagcgttcac cagttacaac aatccgaagg gcaacgccga tacggagcgc ttcatgcgca
     1021 ccctcaaaga ggagtgcctc tggttgcagg agtggacctg cccccttgag ctgaggcgcg
     1081 ccctcaagga ttggcttgct cagtacaacg accattactt gcactcaacg ttgggatatc
     1141 aatcccctag acagtttgca cgagactacc tcaaccgcca cagttctccg ttcgcggctg
     1201 cttgacacat ggggagcatt acaggagtgg gcagcgaggc tggtgatctc tgagctctat
     1261 cctcactggg accggag
//
LOCUS       DASQSL010001562         1638 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_190578, whole genome shotgun sequence.
ACCESSION   DASQSL010001562 DASQSL010000000
VERSION     DASQSL010001562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1638
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190578"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1638
                     /locus_tag="VE844_15905"
     CDS             <1..>1638
                     /locus_tag="VE844_15905"
                     /inference="COORDINATES: protein motif:HMM:NF016944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004352 - glutamate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0019551 - glutamate catabolic process to
                     2-oxoglutarate [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD-glutamate dehydrogenase domain-containing
                     protein"
                     /protein_id="HZC02778.1"
                     /translation="SIAYHSNPSAIPGLRQKLNRVLTRSGLLPNSHSGRALLFILETY
                     PRDELFQASEDELYETALGILHLQERQRVRLFVRADPYGRFLSCLVFVPRDRYHTELR
                     ERMQAIFRTTFNAEEVDFTVALSEAALARIHFIIHTRPGSLPEYDARALEAQLVEASR
                     SWQDKLHEALLEAHGEELGNDLFRRYREAFPAAYREDYTVRDAVYDIDRIEAALRGQR
                     LEMNLYWPLEEMAGDVLRFKLYHPGTSIILSTVLPMLENMGVTVMDDRPYTIEPMGMP
                     PLWIHDFGLKHTEKSEPLNADAFRPLVFQDAFAQVWKGTVENDGFNRLVLRANLNARA
                     IVVLRAYAKYLRQTGSTFSQAYMEQALAHHPRIAERLIELFHARFDPKREGHAEAVSM
                     LSAEIEEALEGVASLDEDRILRGFLGVIQASLRTNYFQLDSQGLPKSYLALKLDPALI
                     PQLPKPRPMYEIFVYSVRVEGVHLRGGKVARGGIRWSDRKEDFRTEVLGLMKAQMVKN
                     AVIVPVGAKGGFYGKRLPDPSVDRQAWLDEGVACYQV"
BASE COUNT          304 a          493 c          497 g          344 t
ORIGIN      
        1 ctcgatcgct tatcatagca accccagcgc tataccgggg ctcaggcaga agctcaatcg
       61 ggtcctcacc cgctcgggtc tgctgcccaa cagccattcc ggccgggcct tgctgttcat
      121 cttggaaacc tatccccgcg atgagttgtt ccaggccagc gaagatgaat tgtatgagac
      181 cgcgcttggg atcctgcatc ttcaagagcg gcagcgggtt cggctgttcg tgcgcgcgga
      241 tccttatggc cggtttctct cgtgcctggt attcgtaccc cgtgatcgct atcacacgga
      301 gttgcgcgag cgcatgcagg cgatcttccg aaccaccttc aacgccgagg aggtggattt
      361 cacggtcgcg ctctccgaag ccgccctcgc ccgtatccat tttatcatcc atacccggcc
      421 gggcagtctg cccgaatacg atgcccgagc gctcgaggcg cagctggttg aagccagccg
      481 ctcttggcag gataagctgc atgaggctct gctcgaggcg catggagaag agcttggcaa
      541 tgatctcttt cgccgctacc gcgaggcttt cccggccgcc tatcgcgagg actatacggt
      601 gcgagacgcc gtctacgata tagaccggat cgaggcggcg ctccgcgggc agcgcctgga
      661 gatgaaccta tattggcccc tggaggaaat ggccggggat gtgttgaggt ttaagctcta
      721 tcacccgggg acctcgatca ttctctccac ggtgttgccc atgcttgaga acatgggcgt
      781 caccgtgatg gacgatcgcc cgtatacgat cgaaccgatg ggcatgcccc cgctctggat
      841 ccatgatttt ggtctcaagc atactgaaaa gagcgaacct cttaatgccg atgcatttcg
      901 gcctctggtc ttccaggatg cttttgcgca ggtgtggaag ggcacggttg aaaacgacgg
      961 ctttaaccgg ctggtgctgc gcgccaatct gaacgcccgg gcgatcgtcg tgctccgggc
     1021 ctacgccaaa tacctgcgcc agaccggttc taccttcagt caggcctaca tggaacaggc
     1081 cctggcccat catccccgca ttgccgagcg cttgatcgag ctcttccacg cccggttcga
     1141 tcccaagcgc gagggacacg cggaggctgt atcgatgctc tcagccgaga tcgaagaggc
     1201 cttagagggg gtagccagcc ttgatgagga tcggatctta aggggcttcc ttggggtgat
     1261 ccaagcgagc ttacggacca actattttca actggatagc caaggtttgc ccaagtccta
     1321 tctggccttg aagctcgatc ccgcccttat cccccaattg cccaagcccc ggccgatgta
     1381 tgagatcttc gtctattccg tccgggtcga aggcgtgcac ctgcgcggtg gcaaggtggc
     1441 gcgcggcggg atccgctggt ccgatcgcaa agaggatttc cgcaccgagg tcttgggcct
     1501 gatgaaggcg cagatggtca agaacgccgt gatcgtgccg gtgggcgcca agggcggttt
     1561 ctacggcaaa cggctgccgg acccgagcgt cgaccggcag gcgtggctgg acgagggcgt
     1621 ggcctgctac caggtgtt
//
LOCUS       DASQSL010001563         1054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_134468, whole genome shotgun sequence.
ACCESSION   DASQSL010001563 DASQSL010000000
VERSION     DASQSL010001563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134468"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(147..506)
                     /locus_tag="VE844_15910"
     CDS             complement(147..506)
                     /locus_tag="VE844_15910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02779.1"
                     /translation="MRQNPIERIDVLWLKGRSIKRAFEVEHTTSIYSGILRMADLLAL
                     QPNMDIRLHIVAPAHRREKVKEEILRPVFSLLERGALSESCTFIAYDSIRQLATLPHL
                     SYLSDTVLDEYDEEAQG"
     gene            complement(540..791)
                     /locus_tag="VE844_15915"
     CDS             complement(540..791)
                     /locus_tag="VE844_15915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02780.1"
                     /translation="MAVSFKSAHFPQEVILMGVCWYMAYPLSYRQVEELMEERGVRVD
                     HATIQRWVLKYSPQLEEALVLSQSSILGAKSENRVSEIQ"
BASE COUNT          226 a          312 c          295 g          221 t
ORIGIN      
        1 gcagaggccg tggaccacaa agccgagact cttccggcgc cgatcatcga ggccatttta
       61 gcggcgcgcc cccgctcgct gacacgggcg attcaccgcc ggcagcatct cgaccagatc
      121 gagcgcgccc tcgtggggtg agtcggtcag ccctgtgcct cttcgtcgta ttcgtccagc
      181 acggtatcgg agaggtaact caaatgcggc aaggtcgcca gctgccggat gctgtcgtac
      241 gcaataaagg tgcagctttc cgaaagggcg ccgcgctcaa ggagggaaaa gacagggcgt
      301 agaatctctt ctttgacctt ctctcgccgg tgcgctggcg cgacaatgtg caaccggatg
      361 tccatattgg gctgcagggc aagcagatcg gccatccgga ggatgcccga gtagatcgag
      421 gtggtgtgct ccacttcaaa cgcccgcttg atggatcgac ccttgagcca gagtacgtca
      481 atgcgctcga tcgggttctg tcgcaaaatt gctttttcag gaatttttga gtccgcaagc
      541 tattgaattt ctgagactcg attttctgat tttgccccta aaattgaact ttgcgacaga
      601 accaacgcct cttccaactg agggctgtac ttcaggaccc agcgctggat ggtcgcgtgg
      661 tcgactcgca ccccgcgctc ctccatcagt tcttccacct gccgatagct caaggggtag
      721 gccatatacc agcacacgcc catgagaatg acttcctgtg ggaaatgggc gctcttgaag
      781 ctcacggcca ttgtcgctct ccctctcgct tgtcactatg agtcagaggg agcgatcata
      841 ccccaaatca cctcaaatga aaatttgcga cagagccctc gtgacgcacg ctgaatcaga
      901 gggggagatc ataccccaga tgacctccca atgaaaattc gcgacagatc ctcgccacat
      961 cacgtcccgc aaaacgtttg ctgcacgcgt tccgtcggca aaggcggggc cgcatattcg
     1021 gcgaaggcgg cctgctcgcg gtaagggtgg gcga
//
LOCUS       DASQSL010001564         2322 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_134484, whole genome shotgun sequence.
ACCESSION   DASQSL010001564 DASQSL010000000
VERSION     DASQSL010001564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2322
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134484"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..378
                     /locus_tag="VE844_15920"
     CDS             <1..378
                     /locus_tag="VE844_15920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02781.1"
                     /translation="CDLCGGNPECAKACPTQAITWPDIYAAGDVAQGIDFSTGQYSVQ
                     AIQPTAAEHGQIAARNMVGLKGALHRGSINMNVLDTLGLISSSFGLWMGAKEGDSVEL
                     CHPERYRYINLQFQDDLLVRARP"
     gene            547..798
                     /locus_tag="VE844_15925"
     CDS             547..798
                     /locus_tag="VE844_15925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011830164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HZC02782.1"
                     /translation="MKIKLKLYATLSNYLPAEAVNHATEVEIPTSATASQILDNFKVP
                     RQMAHLVLLNGVYLEPKQRDTPTFKDGDTLAVWPPVAGG"
     gene            complement(795..1022)
                     /locus_tag="VE844_15930"
     CDS             complement(795..1022)
                     /locus_tag="VE844_15930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02783.1"
                     /translation="MNNLTKLYHEGRNGWYVDTPMGREGPLTSKEEADRYLALIDAVC
                     AARGENSWTRRFTESRPMLFEDEEAVEELDA"
     gene            complement(1147..2154)
                     /gene="moaA"
                     /locus_tag="VE844_15935"
     CDS             complement(1147..2154)
                     /gene="moaA"
                     /locus_tag="VE844_15935"
                     /EC_number="4.1.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013032478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HZC02784.1"
                     /translation="MKITDTLNHPLRDLRISVTDRCNFRCPYCMPKEVFGRDWAFLPR
                     AHLLSFEELVRLARIFVDHGIEKIRLTGGEPLLRRDLPRLIEMLARIDGVRDLTLTTN
                     GSLLARLARDLKQAGLERITVSLDSLDDTVFKAMNDVDFPVHHVLEGIAAAEAVGLKP
                     IKINMVVKRGVNENSIVDMAHHFRHTGHIVRFIEYMDVGHSNDWRMEDVVSAAEILAR
                     IASRWPLEPMATNYRGEVASRYRYRDGGGEIGIIASVTQPFCRNCTRVRLTADGQLYT
                     CLFATRGHDLRRLLRSEAQDADIGMLLRALWHRRTDRYSELRSDATRSLEKVEMSRVG
                     G"
BASE COUNT          543 a          646 c          588 g          545 t
ORIGIN      
        1 tgcgatctgt gcggtggcaa ccctgaatgc gccaaggcct gtcctaccca ggccatcact
       61 tggccggaca tttatgccgc gggcgatgtg gctcagggta tagatttttc tacaggccaa
      121 tactcagtcc aggcgatcca gcccaccgcc gccgaacacg gacagatcgc agcccgtaat
      181 atggtgggtc ttaaaggcgc cctacatcgc ggtagcatca acatgaatgt actggatacc
      241 ttgggactga tctcgagctc atttggcttg tggatggggg ccaaggaggg cgattcggta
      301 gagctttgcc atcctgagcg ctatcgttac atcaatctac aatttcagga tgacctatta
      361 gtaagggcga ggccttagga ctcacccagc atgtcggtgt gctccgagga ttgattcaaa
      421 gtaaaatacg acttaagtcc tggaaggata aactgaaggc cgatcccaca cggataatgg
      481 aggcgtatat cgccaacacc tacggcctgg gttttaacgg tgatcgtttt aacgctgaat
      541 tctattatga aaataaaact taaactttac gctacactca gtaattacct acccgcggaa
      601 gccgttaatc atgccaccga ggtagagatc ccaacctccg ccaccgcttc tcagatcctg
      661 gataatttca aggttccgcg gcaaatggca catctcgtat tgttgaacgg tgtttatctg
      721 gagcctaagc aacgcgacac ccccacgttt aaagatggag ataccctcgc ggtttggccc
      781 ccggtagcag gcggttaggc gtctaattcc tccaccgctt cttcatcctc aaacaacata
      841 ggacggcttt ctgtaaagcg gcgcgtccag ctattttcac cgcgtgcagc gcacaccgca
      901 tcgatcaatg ccagatagcg atcggcttct tctttcgaag taagcggccc ttcgcgtccc
      961 atcggtgtat caacatacca gccgtttcgg ccttcgtgat acagtttcgt tagattgttc
     1021 atactactct cctgagtgct tgattcatat tgaatatgat tcagcactat ctatgccata
     1081 tttattgtgc agcgcgaatc gtcaggctta gctgttgttc agtaacgatg gatgaaggta
     1141 gggatgtcaa ccaccgacgc gtgacatttc tactttttca agacttcttg tcgcatcact
     1201 gcggagctca gagtagcgat cggtccgcct atgccatagc gcccgcaaaa gcatgccgat
     1261 atccgcatct tgggcctcgc tgcgaagtag acggcgcaga tcgtggccac gcgtggcaaa
     1321 gagacaggtg tataattgac catcggccgt gaggcgcaca cgggtacaat tccggcagaa
     1381 gggctgggtg accgaggcga tgatgccgat ctccccgcct ccatcccgat accgatagcg
     1441 gctggcaact tcgccgcgat agttggtggc catgggctct agcggccacc ggctagcgat
     1501 cctggccagg atctcagccg ccgagaccac atcctccata cgccaatcat tggaatggcc
     1561 cacatccata tactcgataa agcggacgat atgaccggta tgacggaaat gatgggccat
     1621 atccacaata ctgttttcgt ttacgccgcg cttgaccacc atattgatct tgatcggttt
     1681 aagccccacg gcctctgccg ccgcaatccc ttcgagcaca tggtgcacgg ggaagtcaac
     1741 atcgttcatc gccttgaata cagtatcatc cagtgaatcc aggctcaccg ttatccgctc
     1801 tagacccgcc tgcttgagat cacgggccag gcgcgccagt aacgagccat tggtcgtcag
     1861 ggtcaggtcg cgcacgccgt caatccttgc tagcatctcg ataagccttg gcagatcccg
     1921 gcgcagcagg ggttcaccgc cggtcaagcg gatcttttct ataccatggt cgacaaagat
     1981 ccgggcgagc cggacgagct cctcgaagct tagcagatgc gcgcgcggta gaaaggccca
     2041 gtcccgcccg aacacctctt taggcatgca ataagggcag cggaagttac agcggtcggt
     2101 aactgagata cgcaagtccc ggagaggatg attcaaggta tcagtaattt tcatgtggat
     2161 ctgtcatcaa gcgacttaaa ccctacgaat tctatacttg agcattataa tcaactttta
     2221 attccctgga agccggctct gctccctttt tgttgagcag cctctcgtcg agctcctgaa
     2281 agcaggcgta gtggccactg tgcagccttt cacctataaa gt
//
LOCUS       DASQSL010001565         1117 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_190627, whole genome shotgun sequence.
ACCESSION   DASQSL010001565 DASQSL010000000
VERSION     DASQSL010001565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1117
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190627"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..636)
                     /locus_tag="VE844_15940"
     CDS             complement(<1..636)
                     /locus_tag="VE844_15940"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZC02785.1"
                     /translation="MDALVIGCGVIGLSTAVRLQEAGLSVEIWTANLPEESTSIVAAA
                     TWYPYRAYPEDKVLGWGSRTYTVFEDLAGDPQSGVHMREGIELSQATLSDPWWGSAVR
                     WLRRCGGDELPPGYRDGYVFNQPVIEMPIYLRYLLERFTAAGGLVERAVVSSLEEAAG
                     PNQLVVNCTGLGARELVGDHQMTPIRGQIVRVRNPGLDRCVLDANNPEGLTY"
BASE COUNT          265 a          352 c          288 g          212 t
ORIGIN      
        1 gtacgttaag ccctcgggat tattcgcgtc caacacacac ctgtcgaggc cggggttgcg
       61 aacacggacg atttggccac gaatcggcgt catctgatgg tcgccgacga gctcgcgggc
      121 gccgagcccc gtacagttaa ccaccagctg atttggcccg gccgcctcct ccaaggaact
      181 cactacagcc cgctcgacga gccccccagc agcggtaaac cgctccaaca ggtagcgcag
      241 gtagatcggc atctctatca ccggctggtt aaagacgtat ccgtcgcggt aaccaggggg
      301 cagctcgtct ccgccacacc gccttagcca ccgcaccgca ctcccccacc aaggatccga
      361 tagcgtagcc tgcgagagct ctatgccttc gcgcatgtgg acaccgctct gcgggtcgcc
      421 tgctagatcc tcgaagactg tataggtccg gcttccccag ccgagcactt tatcttcggg
      481 gtaagctcta taggggtacc atgtcgcggc agcgacgatc gacgtggact cctcgggcag
      541 gttagcagtc caaatctcca cgctcaaacc agcctcttgc aggcggacgg ccgtcgacaa
      601 gccgatcaca ccacaaccga ttactagtgc gtccacatga aatgcccttc tgcttcaacc
      661 actaccttgc aactaacggc aacattattg cgcctcaccg attcccacac aaaagtaaca
      721 tctatcggct agtgacggcg gtgatgccgg tgactcgaga gtcaaagccc aaaggtgtct
      781 cagacaccta cgaggaatgt tgaacacctg ccaaacaaga gtaagtcgcc gcgccaataa
      841 gaggagtgcc agcatgtgta agtaggaaga gtcgctcggt tactcgggaa ggttctgcat
      901 ctatgaagac tcggcttcat gccgaccttc acctgttggc gcaagctcca agggaagccc
      961 agcaattcgc gcagcaaccg tgcagcaacc cgagtaaagc tcctgaggtg ccggaaatgt
     1021 gtcaacgcag aaatatagcc atttgcagga gatctgcaat ctcaagaaac ctccagcaat
     1081 ctatcgtact accttcactc ggcaggggtc gctgatt
//
LOCUS       DASQSL010001566         3950 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_171032, whole genome shotgun sequence.
ACCESSION   DASQSL010001566 DASQSL010000000
VERSION     DASQSL010001566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3950)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3950)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3950
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171032"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2634)
                     /locus_tag="VE844_15945"
     CDS             complement(<1..2634)
                     /locus_tag="VE844_15945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013818498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZC02786.1"
                     /translation="MAVFDQSVRQHDPYLFAEFESYRTCQGQGMQPQQISDLLVRMAP
                     FVGMFMARLFNVTQDREHQIALVREEMDTIFTFRREVVMKCEASFKNENLSTWNIPQI
                     QRNLELLRRVAFPEVHRGDPDSERGVARVSAKLWRLANHFEALDQGKSSDYPNANEEM
                     VEIRTRLNADPEARAAFAEALTVQSPVEFIGGLLDVVQRWSYAALHDPSMQAEMAGWI
                     SFKRPKKTDFHDLVPYETLERDGYKALAGPHTRRRDGFALTDRRFNERQVLYEVDHCI
                     YCHDHDADSCSKGMRNRKDGSYKVNPLGVNITGCPLEEKISEMHLVKRQGDNIGALAL
                     IMIDNPLCPGTGHRICNDCMKGCIYQKTEPVNIPQIETKVLTDVLFMRWGFEIYSLFT
                     RWNPLNIKRPHALPYNGKNVLIAGLGPAGYTLAHYLLNEGFAVVGIDGLKIEPLPRSL
                     TGDADRLPEPILDFKKLYEDLDKRIMAGFGGVAEYGITVRWDKNFLKVIYLTLLRRQT
                     FRCYGGVRFGGTLTINETWDLGFDHIAIASGAGKPTIIKLKNNLIRGIRKASDFLMAL
                     QLTGAAKTSSLANLQVRLPAGVIGGGLTAIDTTTELMAYYPVQVEKILHRYERLVARY
                     GEEKVRARYDTEEQAILEEFLSHGRAIRTERQCAQAANEVPNFQPLLQAWGGVTLFYR
                     KGMRDAPSYRQNHEEIEKAMEEGIAWAEGAEPREAIPDSYGHLRAVRFEKLVPENGRW
                     VSAGEVVEVPLKSLFIAAGTSPNTIYESEHPETFEMDGLFYQRHESVWDDGEINLRSV
                     KDTKWPKIGRPAPLTSYHRNGRYISFYGDNHPVYAGNVVKAMASARDGYPYVVKLFEQ
                     ALNALDPVKQHERDRALLAFQQ"
     gene            complement(2786..3088)
                     /locus_tag="VE844_15950"
     CDS             complement(2786..3088)
                     /locus_tag="VE844_15950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005002736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4389 domain-containing protein"
                     /protein_id="HZC02787.1"
                     /translation="MNINKEHVLDTATWTRGLFILLFAIIYKAAETVLWLMVVGQFGF
                     KLLTGRPNPYLLDFSQQLSTFIYQLLLYITFKSDSKPFPFSGWPAGAYDRDLRNKV"
     gene            3411..>3950
                     /locus_tag="VE844_15955"
     CDS             3411..>3950
                     /locus_tag="VE844_15955"
                     /inference="COORDINATES: protein motif:HMM:NF013216.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HZC02788.1"
                     /translation="MSDPRLLATQILTGVMREGCSLSASIATGLSVLEDSRDRAFAQE
                     LAYGVLRWLPELDQVLIQLLQRPFRSKDTDLRVLLLIGLYQLIHLKTPAHAAVSATVA
                     ASRALAKPWAGSLINAVLRNYLRNSERFLEQAHAMETARYAHPNWLLAELKQAWPKEW
                     QAIVAANNSRAPMTLRVNAR"
BASE COUNT          882 a         1085 c         1062 g          921 t
ORIGIN      
        1 ctgctggaag gccaaaagcg cccgatcgcg ctcatgttgt ttaaccggat cgagcgcatt
       61 aagcgcctgc tcaaacagtt ttaccacata aggatacccg tccctggcgc tcgccatggc
      121 cttgaccaca ttgccggcat agaccggatg gttatctccg taaaatgaga tataccggcc
      181 attccgatgg tacgaggtca agggagcggg ccgaccgatc ttgggccatt tcgtgtcttt
      241 gaccgatcgt aggtttatct cgccgtcatc ccataccgat tcatggcgct gataaaacag
      301 gccgtccatc tcgaaggtct caggatgctc gctctcatag atggtattgg gtgaggtacc
      361 ggcagcaatg aagaggcttt tgagcggcac ttcgaccacc tcacccgcgc tcacccagcg
      421 gccgttttct ggcaccagtt tttcaaaccg cacggcccgc agatggccgt aactgtctgg
      481 gatggcctca cgcggctctg cgccttcggc ccaggcgata ccctcttcca tcgccttttc
      541 gatctcctca tgattctggc gataggaagg cgcgtctcgc atccccttgc ggtagaacag
      601 ggtgacgccg ccccaggctt gaagcaaagg ctggaaattg ggtacttcat tcgccgcttg
      661 ggcgcattga cgctcagtcc ggatcgcccg cccatggctt aagaattcct ccaggatcgc
      721 ctgctcttcc gtatcatagc gggcgcgcac cttctcttcc ccataacgcg cgaccagcct
      781 ctcatagcgg tgcaggatct tctccacctg gacggggtaa tacgccataa gctccgtggt
      841 ggtatcaatg gctgtgaggc cgccgccgat gacccccgct ggcagacgca cttgcaggtt
      901 ggcgagcgaa gaggtcttgg cggccccggt gagctgcaag gccatgagaa agtccgaggc
      961 cttgcggatc ccgcggatca ggttgttctt gagcttaatg atggttggct tgccagcgcc
     1021 gctggcgatc gcgatatgat cgaaacccag atcccaggtc tcgttgatgg tcagcgtacc
     1081 gccaaaacgg acgccgccgt aacaacggaa tgtctgacgc cgcaggaggg tcagatagat
     1141 caccttgagg aagttcttgt cccagcgcac ggtgatgccg tactcggcta caccgccaaa
     1201 gcccgccatg atccgtttat cgagatcctc gtagagtttt ttgaagtcta aaatgggctc
     1261 cggcaagcgg tcagcgtccc ctgtcaagga tcttggcaag ggctcgatct taagcccatc
     1321 gatgccgacc acagcaaagc cttcgttcaa gagataatgg gccagcgtgt agcccgcagg
     1381 tcccaggcct gcgatcagga cgttcttgcc gttatagggc agggcatgag ggcgcttgat
     1441 attcaaggga ttccagcggg taaacagact atagatctca aaaccccacc gcatgaacag
     1501 cacgtcggtc aataccttgg tctcgatctg gggaatgttg accggctcgg tcttctgata
     1561 gatgcagccc ttcatgcagt cgttgcagat ccgatggccg gtgcctgggc acagaggatt
     1621 atcgatcata atgagcgcca gcgccccgat gttgtcgccc tggcgtttga ccaggtgcat
     1681 ctccgagatc ttctcctcga gggggcagcc ggtgatgttc acccccaggg ggttgacctt
     1741 gtagctgccg tctttgcggt tgcgcatgcc tttggagcaa gaatcggcat catgatcgtg
     1801 gcagtagatg cagtgatcga cctcgtagag cacctgccgt tcgttgaagc gcctatcggt
     1861 caaggcaaat ccgtcgcggc ggcgtgtgtg tggtccggct aaagctttat agccatcgcg
     1921 ctcgagtgtt tcatagggta cgagatcatg aaagtccgtt ttcttcggtc gcttgaagct
     1981 gatccaccct gccatctccg cttgcatgga aggatcgtgt aaagcggcgt aactccagcg
     2041 ttgaacgacg tctaataatc cgccaatgaa ttcaacagga gattgcaccg tcagtgcctc
     2101 ggcaaaggct gcgcgtgcct cgggatccgc attcaagcgg gtgcgtatct ccaccatctc
     2161 ttcgttggca ttgggataat cgctgctctt gccttgatcg agggcctcga aatgattggc
     2221 aagacgccaa agcttggcgc taacccgagc tactccacgc tcactatcgg ggtctcctcg
     2281 gtggacctcc ggaaaggcga cccttctgag cagttccagg ttccgttgga tttggggaat
     2341 attccaggtg cttaggttct cgttcttgaa gcttgcctcg cacttcatca ccacctcacg
     2401 acggaaggtg aaaatggtat ccatttcctc gcgcacgagc gcgatctggt gttcgcggtc
     2461 ctgcgttaca ttgaagaggc gcgccatgaa catccctaca aaaggcgcca tccgcaccaa
     2521 gagatccgag atctgctgcg gctgcatgcc ttggccttgg caggtgcggt agctttcaaa
     2581 ttcagcaaag agataagggt catgctgcct gacagattga tcaaatacag ccaatagatc
     2641 cttcaatcga agtggatcgt agagatcgct gtagttaaac cctgaaatac ccagaaccgc
     2701 cgtcctggga gtaggagtag ctaaggatat gtttgtcgaa gcaggggttt tccaggtctt
     2761 tatcatgatt aatcgttatt gtccactata ccttattcct aagatctcta tcgtaagcgc
     2821 cagcaggcca gccgctgaag gggaaaggct tggagtccga cttaaaggta atgtaaagca
     2881 ggagctgata aataaatgta ctcagctgct ggctaaaatc caacaggtat ggattgggcc
     2941 gtcctgtcaa taacttaaag ccaaattgac ccaccaccat tagccagagt acggtctcgg
     3001 ctgccttata aatgatggcg aacaggagaa taaaaagacc tctcgtccag gttgcagtat
     3061 caagcacgtg ttctttattt atgttcatgg ttatacatga aagaataacc tcattgtaac
     3121 tgcactattt tatgctggat cgcgcggatc tgaaatgtgg aaagtagccc accgatgtca
     3181 ttcttatgac ctcatagtgt gactgtcttt cttatccagg ttagtagttc tttaatttac
     3241 cgattaaccg aaaaattgtc attaatactg taaaaatctg tttatgtcga ttatttgact
     3301 atgaaacccg agaaataggg gcgaggatcg cgcgatcggg cgcggagaag acccgagcat
     3361 ccgaaggttg gtataatcga tcgcacataa aacccacttt cctaacattt atgagcgatc
     3421 cacgcctcct ggcgacgcag atcctaacag gggtcatgcg cgaggggtgc tctttgtctg
     3481 cctctatagc gaccggcttg agcgtgctcg aagactcaag agaccgcgcg tttgcgcaag
     3541 agcttgccta tggggtcctg cgctggctgc ctgagctcga ccaggtcctg atccaattac
     3601 tgcagcgccc cttcagatcc aaggataccg atctccgggt cctgcttctc attggactgt
     3661 atcaactgat ccatcttaaa accccggcac atgcggcggt atccgccaca gtagcggcta
     3721 gccgggcatt agccaaaccc tgggcgggat cccttatcaa tgcggtatta cgcaactatc
     3781 tccgaaacag tgagcgcttt cttgagcagg ctcatgctat ggagacagcc cgctacgctc
     3841 accccaactg gctgcttgcc gaattgaaac aggcctggcc gaaagagtgg caggccatcg
     3901 tagcggcgaa caacagccga gcgccgatga cactccgggt caatgctcgc
//
LOCUS       DASQSL010001567         1812 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_161177, whole genome shotgun sequence.
ACCESSION   DASQSL010001567 DASQSL010000000
VERSION     DASQSL010001567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1812
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161177"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(117..>1812)
                     /gene="rpoD"
                     /locus_tag="VE844_15960"
     CDS             complement(117..>1812)
                     /gene="rpoD"
                     /locus_tag="VE844_15960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010943710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HZC02789.1"
                     /translation="YDEVNDILPPDVVSPEHIDDLMVLFGEMDIELVDTDHGESSVEV
                     VKVDDKELLEEEKSLSLRESGGGHTDDPVRMYLREMGSIPLLTREGEVEIAKRIEEAQ
                     NQIIMAVIRNPLATKEVLHLRDKLKNGKLSLEELGAPAGADEDPEVGWHVQGRRQLVD
                     FMDQIAACDLQLKRIKKRLSQNTLAEHIRRELLAEEKKIRAKLARLIKEINLQTVHLD
                     RIVQKLNCLVDRIRFAKREAAEYLQELRLSEEELKVALRHLRNGGSDDALPSRGMSHS
                     LETLQAYEKKLRNVRRKIRRIELESGVSEKELLEMLEAINEGRAKDKEAKRELAEANL
                     RLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRA
                     IADQARTIRIPVHMIETINKLIRTSRYLVQEMGREPTPEEIAERMEMPVEKVRKVLKI
                     AKEPISLETPIGEDKDSHLGDFIEDKKVISPLEAAMKLNLKEQTLKVLQTLTPREEKV
                     LRKRFGIGIDSEHTLEEVGQDFDVTRERIRQIEAKALRKLRHPSRSKRLRSFVDNV"
BASE COUNT          322 a          521 c          494 g          475 t
ORIGIN      
        1 tatgccttct ggttcgcctg gaaggattat tacccagaca gcgctgtcta tggggaggac
       61 gcccggccag aggccgggcg ttgaaaagcc gccatcgcgc agcgcagaag ctgcggttac
      121 acgttgtcca cgaagctccg caagcgcttg ctacggctgg ggtggcgtaa tttgcgcagc
      181 gccttcgcct cgatctgccg gatgcgctcg cgggtgacgt cgaagtcctg accgacctct
      241 tcgagcgtat gttcgctatc gatgccgatg ccgaagcgtt tgcgcagcac tttttcctca
      301 cgcggtgtga gggtctggag caccttcagc gtttgctcct tgaggttgag tttcatcgcc
      361 gcctctagcg gcgaaatgac ctttttatct tcgatgaaat ccccgaggtg gctgtcctta
      421 tcctccccga tcggggtctc gagagagatg ggctctttgg cgatcttcaa caccttccgt
      481 actttttcga cgggcatttc catacgttca gcgatttctt ccggggtggg ctctcgtccc
      541 atctcttgca ccagatagcg agaagttcga atcagtttat tgatcgtctc gatcatatgc
      601 acggggatac ggatggttcg ggcctgatcg gcgatcgctc gggtgatcgc ctgtcggatc
      661 caccaagtgg cgtaagtact gaatttatac ccacgacggt attcaaactt gtccaccgcc
      721 ttcatgagcc cgatattgcc ttcttgaatg agatcgagaa actgcaggcc acggttggta
      781 tattttttcg cgatactcac cacgagccgc agattcgctt ccgcgagttc gcgcttggcc
      841 tctttatctt tggcgcgtcc ttcgttaatc gcctcgagca tttccagcag ttctttttct
      901 gagaccccac tttccagctc aatacgccgg attttgcgcc gcacattgcg cagcttcttc
      961 tcataagcct ggagcgtttc aagagaatgc gacatcccgc ggctgggtaa tgcgtcgtcg
     1021 ctaccgccat tgcgcaggtg acgtagggcg accttgagtt cttcctcgga caaccggagt
     1081 tcctggaggt actccgccgc ttcccgtttc gcgaagcgga tacggtcgac caggcaattc
     1141 agcttctgca cgatgcgatc cagatgcacc gtttgcaggt taatttcttt aatgagccga
     1201 gccagtttgg cccggatttt cttctcctcg gctaaaagtt ctcggcggat gtgttccgcc
     1261 agggtgtttt gactcaggcg ctttttgata cgcttgagct gcaggtcaca ggcggcgatc
     1321 tggtccatga agtcgacgag ttgtcggcgg ccctggacgt gccacccgac ctcggggtct
     1381 tcatcggcac ccgcaggggc gccgagttct tccaggctga gcttgccatt tttcagtttg
     1441 tcgcggaggt gcaggacttc tttggtggct agcgggtttc tgataacggc catgatgatt
     1501 tgattctgag cttcctcgat gcgtttggcg atttcgacct cgccttcccg ggtgagcaga
     1561 ggaatcgagc ccatctcgcg cagatacatg cgcaccgggt catcggtatg cccccccccg
     1621 ctttcccgga ggctcagcga cttctcctct tccagtaatt ctttgtcatc gactttaacg
     1681 acctcgacgc tcgattcgcc atggtcggta tcgaccagct cgatatccat ttcgccgaat
     1741 aagaccatca agtcatcgat atgctccggc gagacgacat ccgggggcaa gatgtcattg
     1801 acctcatcat ag
//
LOCUS       DASQSL010001568         1593 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_198663, whole genome shotgun sequence.
ACCESSION   DASQSL010001568 DASQSL010000000
VERSION     DASQSL010001568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198663"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            330..1490
                     /locus_tag="VE844_15965"
     CDS             330..1490
                     /locus_tag="VE844_15965"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02790.1"
                     /translation="MLSRAGWSGLQGAKILLGLLVLLVPCGWPLLIGVDETIERRSGR
                     RIKAKGCYRDAVRSTQKVCVKCFGLKWISMMLIVPVPWSGRCWALPCLTVLAPSKRAN
                     EKAQKRHKTTVNWTVQMVKGVARWLGRRAWALLGDGSYACVELAWTCLGQQVTLVSRL
                     RLDAQLYEFPAPVAAGRRGPKPKKGKKLPALKTRLEEAQMEGDRATAAWYGGERNPVR
                     LLTGVCLGHTPGERPLPIRWVLVVDPTGKARSEAFFSPDPNLIPETIVEWFVLRWNVE
                     VTFEEGRRHLGLETQRQWSDKAIARTTPALLGLFSLLCLMAYRLLDLMQLPLQSTAWY
                     LKQEATFSDVLAFVRRAIWAGKYLDKSISPPDQIVFHRTEWETLLDQLASTG"
     gene            complement(1502..1593)
                     /locus_tag="VE844_15970"
                     /pseudo
     CDS             complement(1502..1593)
                     /locus_tag="VE844_15970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020465186.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="GFA family protein"
BASE COUNT          325 a          407 c          502 g          359 t
ORIGIN      
        1 ttcggatctt tagctgttga caatcacagt tggaacagta cagtggagtc ggggtgagcg
       61 gcatagatcc tcctaaaaga tttgcctact ttaaaagtaa agtaggctag gctgctcacc
      121 cctaaaaaac aagtcaaatt aattcaccgg accccattgg aattaaacgg aaccagtgcc
      181 ggtgcctttg ttcccctgtt ttcccgcccg gtgtggtgtc atgcccaaat gttggtggtg
      241 ggtgcgatcc tctgccgggg accgcatacg gtgacggcgg tactgcgggt aatggggctt
      301 ggaggtgaga ggcggtttga taccatcggg tgttgagccg agccggctgg tcggggctgc
      361 aaggggcgaa gattttactg ggattgctag tgttgctggt gccttgtggg tggccgctat
      421 tgataggggt agatgagacg attgaacggc ggtctgggcg aaggatcaag gccaagggat
      481 gctaccggga tgcggtgcgt tctactcaga aggtctgcgt gaaatgtttt gggctgaaat
      541 ggatcagcat gatgctgatt gtacctgtgc cgtggagtgg gcgctgttgg gcgctgccct
      601 gtttgaccgt acttgcgccc tcaaagcggg ccaacgaaaa ggcccaaaaa cggcacaaga
      661 ccacggttaa ctggacggtg caaatggtga aaggggtggc acgttggtta gggcgtaggg
      721 cctgggccct gctgggcgat ggcagctatg cgtgcgtgga gctggcctgg acgtgtcttg
      781 gccaacaggt gacgctggtg tcgcggttac ggttggatgc gcagctctat gagtttccgg
      841 cccccgtggc ggctggccgg cggggcccca agcccaagaa aggaaagaaa ctacccgctt
      901 tgaagacccg gctcgaagaa gcccagatgg agggggaccg tgctacagcc gcctggtatg
      961 ggggagagcg caaccccgtg cgtttgctca ctggggtgtg cctggggcat acccccgggg
     1021 aaagacccct gcctatccgc tgggtattag tggtggaccc cacaggcaag gctcggtcgg
     1081 aggccttctt cagccctgac cccaacctca tccctgaaac catcgtggag tggtttgtcc
     1141 tgcgttggaa tgtggaagtc acctttgaag aaggccgccg tcatctggga ttggaaaccc
     1201 agcgccagtg gtcagataaa gccattgccc ggaccacccc agctttattg gggctcttct
     1261 ctttgctctg cctgatggct tatcgactcc tcgacctcat gcagttgccg cttcaatcca
     1321 ccgcctggta tctaaagcaa gaagccactt tctcagacgt attggccttc gtcaggcgtg
     1381 ctatttgggc ggggaaatat ttggacaagt ctatctcgcc ccctgatcag atagtatttc
     1441 accgcactga atgggaaacc cttcttgacc aacttgcctc taccgggtga aatggccaaa
     1501 gtcgagtaca tatcgagcag ttgcatttgt atgtacccgc gctcaggtca atgtccgcct
     1561 caaagcggac agcgccgcag tggcagctcc cgg
//
LOCUS       DASQSL010001569         1519 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_134513, whole genome shotgun sequence.
ACCESSION   DASQSL010001569 DASQSL010000000
VERSION     DASQSL010001569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1519
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134513"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..1334)
                     /locus_tag="VE844_15975"
                     /pseudo
     CDS             complement(139..1334)
                     /locus_tag="VE844_15975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611503.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            complement(1402..1519)
                     /locus_tag="VE844_15980"
                     /pseudo
     CDS             complement(1402..1519)
                     /locus_tag="VE844_15980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012268012.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
BASE COUNT          325 a          449 c          414 g          331 t
ORIGIN      
        1 tatctcgatt gcagctgctt tcactacaac atcgaagtgg gcataacgcg tattcaggat
       61 cgtcacttta tcttgaaaga atgggtgctg tgccgtccgt cgacaaaaat cctggagtga
      121 acccctggtg tgagacagtc agttaagctt ctgatggtgg acgatgtcat ggctcaactg
      181 ctcaaactcg accggcggca gatagcccag tgccgagtgc aaccgcttgt ggttatacac
      241 ctcctccagg aagtagccaa tacgttcacg tgcttcgccc tcatcctggt actcaaacag
      301 gtagacttcc tcatacttga gcgttttgat aaaactctcc gcctgggcat tatcgtacgg
      361 gtttccggtg cggctcatgc tcatccgaat cccatgctct gcgagcaggg tggtataggc
      421 agacgaggca tattggaccc cacgatccga gtgatggacc aaccccggcc gcacgtggcg
      481 cgtggccaga gccatacgca gagccgcgac tgccaactcg gcctctaagg aaccgtcgag
      541 tgcccagcca atacaccggc ggctgtaggc atcaaggatc acggccagat agaggaatgc
      601 ccgcggcaag cggatatagg tgatgtcagc gacccagagt tgatccacct ccgccacagc
      661 catcccgggg accaaattgg gataagccat gagaccatgc tgggagtccg tggtctgtat
      721 aaaacgcttt ttccggaggc acaggagatt atcctcacgc atcaatcgca acacccgctt
      781 gtgattgacc gcgatgcctt ggcggcgtaa ctcatgcgtg attcggcggt agccatacgc
      841 cggcatctcc agggcaatag cctggatgtg atcgcgtatg accagatctt gctccagtgc
      901 ccctccactc gtatcgccac gatagtatgc cgcgcgggat agtgagagca gcctacagag
      961 gcggacaatg gacggccctt ggcacgagga ccccgcttca gcgatcagcg cccgcatcag
     1021 cgctctccag tggcgtttgg ccgctggatt cgtccctcga gccgcagcaa agcctttttt
     1081 aaaagcatgt tctccatggt gagttggcca ataaggcgct ccaactcggc gatgcgcgcc
     1141 tcggctttgt gcaaatggcc attgcccgca aaggcttgct cggcatattg ctggtgctcc
     1201 ttctgccacc ggcggatcaa tgtaggatgc agttgatgct cccgcgcagc ctgggccaac
     1261 ggcttgccag cttcgacttc gcggatgacc tgcaccttga actcgcgggt aaaccgacgt
     1321 cgactcagag ccaagggata gcctcctttc atgcatcagg gaagcttaac tccttgtctc
     1381 agtcaagggg tgcagtccac ccagtgtgat acgcagggtt tcgataagct cctctttcga
     1441 gcgttcctga cagttcacgc ccggaacctc ttcgatccag ccgatccacc agtcgccttt
     1501 ctgctttaga agtgcggta
//
LOCUS       DASQSL010001570         1206 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_134524, whole genome shotgun sequence.
ACCESSION   DASQSL010001570 DASQSL010000000
VERSION     DASQSL010001570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1206
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134524"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..169
                     /locus_tag="VE844_15985"
                     /pseudo
     CDS             1..169
                     /locus_tag="VE844_15985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003870476.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
     gene            1011..>1206
                     /locus_tag="VE844_15990"
     CDS             1011..>1206
                     /locus_tag="VE844_15990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02791.1"
                     /translation="MVEAKRARTAETPKPPSFDLRSRAPYFYPTTQPKLWRRAKKRLD
                     KPLPYLRYIKAVLAAGVIQCG"
BASE COUNT          279 a          303 c          396 g          228 t
ORIGIN      
        1 gccgctgcaa cacatggccg ggacgctgag gcgttggttt gagccgattg tgtattatat
       61 tcggcattgc tacagcaacg ggatgaccga gggttttaac aacaagatta agctgattca
      121 gcgcatggca tatggtttgc gaaatgaaca caaccgtcga aagcgcataa tggcctactg
      181 tggaaagact tatgtagcgg ccgacaaggc cacaatcccg cgggtgaaag tcccgccgtg
      241 tcaattgccc gattcagaca cgtagcgata ccacagttcc tgagggtaac ctcaggttca
      301 ttgcgtggtg taaacgtccc ggctgccctg acgcgcaagc gacagcggta ggtgcaacct
      361 ggggggctag caagcatggg agcctgaaca taacggaatg actgcagcct cgtaagccac
      421 accctgttga agttgctttg cagggatagt tttgcgagcc gaacgtgtta agtctgacgt
      481 gaggccgatg tctcccggga agaaacgggt aagggcaccg ggaggtcgca gcggggtacg
      541 ggtccaagcg cctatgcacg gattgtggag ataacgtcgg gaaccaccct cttgcagccg
      601 gggcttgcgg caaccggcaa agactcgctg tatagggcga atacctaaat cagcgcgagg
      661 gttagggtgg ggcgcatgag ctcgtaggag cgatgaagga ggggtagtgc cctctgaggg
      721 cgtgctggac acttccctga gctgggtaac accgagttca ggcaaagggg ctctcggtaa
      781 gtggcgggcg ccttataggc aacaccgtct ggactcagag ccagggtgcg gtgaccacct
      841 cgctgggcgt cgagctgggg gtataacccg gtatcccagg ggtgtatacg agcgagcgtt
      901 taagcctcgg gaggtcgggg aaggtcctct ggggatatgc tgctgctgcc aaccggactc
      961 gggaaatccg accgtccggg atgagagggg ggcttacgga aacgtgggct atggtggaag
     1021 ctaaacgggc acgtaccgcg gaaacgccga aaccgccaag ctttgaccta aggtcgcgcg
     1081 cgccatattt ctacccgacg acccagccca aattatggcg aagagccaaa aaacggcttg
     1141 acaagccatt accgtatctt cgctacatta aggccgtgtt ggcggcaggc gtcatacagt
     1201 gcggtg
//
LOCUS       DASQSL010001571         1025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_134526, whole genome shotgun sequence.
ACCESSION   DASQSL010001571 DASQSL010000000
VERSION     DASQSL010001571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134526"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            127..381
                     /locus_tag="VE844_15995"
     CDS             127..381
                     /locus_tag="VE844_15995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006508767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003729 - mRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HZC02792.1"
                     /translation="MDRPDKLLERLRRRPSDFTWAELTTLLRRLGFRQVRTGSTGGSR
                     RRFVHPEGCVISLHEPHPGRILKRYQIDQILETLEQEGLI"
     gene            378..728
                     /locus_tag="VE844_16000"
     CDS             378..728
                     /locus_tag="VE844_16000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007090429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HZC02793.1"
                     /translation="MKDTMSYKGYTGSVHYSDDDRVFFGKIEYIRSLVSYEGTDVDSL
                     RQAFEEAVDDYLALCKQEERKPEQPFSGTFNVRTGSDLHRRAALLAKAQGTTLNRVVS
                     EALQRYLQQEHHAC"
BASE COUNT          223 a          291 c          311 g          200 t
ORIGIN      
        1 ccatacttac gcgtgcggga aggtagcggt ggaaaccaga ccaacacatc atttaggcga
       61 agtatgcaac taataatggt tgcataaggt gctttgacat agtatggtgt cttctgacga
      121 gtgcacatgg acagaccaga caagctcctt gagcggctac gccgccgccc gagtgatttc
      181 acctgggctg agctgaccac cctgttacgg aggctggggt tccggcaggt gcgcacgggg
      241 agcaccgggg gatcgcggcg ccgctttgtc cacccggagg gctgcgtgat cagcctccat
      301 gagccgcatc cgggacgcat cctgaagcgc taccagattg accagatcct tgaaacgctg
      361 gaacaggaag gcctgatatg aaggatacca tgagctataa gggctatacc ggttcggtcc
      421 actacagcga cgacgaccgg gtattttttg gcaagatcga gtatatccgc agtctcgtga
      481 gctatgaggg gacggatgtc gactccctgc gtcaggcgtt tgaagaggcc gttgacgatt
      541 atctcgccct gtgcaaacag gaggaaagaa agcctgagca gcccttttca ggcacgttca
      601 acgtccgcac cggctctgat ctccaccgcc gtgcggcatt gctcgcgaag gcacaaggca
      661 cgaccttgaa ccgcgtggtg tctgaggccc ttcaacggta tctccagcaa gaacaccatg
      721 cgtgctaagt accgctcggc ggaagtaagt gaccaatact caaggcatgt atgatatggt
      781 accggccctg acagccttac cgaggacttg ctttcgacca gcgccagcgg cggcgcagct
      841 ggaggacacg tcatgccggg tcgtaagtct ccattggtta ttcagctgga accccctgag
      901 caagcggcat tggaacactt ggtgcgctcg ccgacgactg ccaatggcgc ggcccagcgg
      961 gcacgcatca tcttgtcgct ggcggccggt gtatcgatca cgcacacggc ccgccgggtg
     1021 ggcgt
//
LOCUS       DASQSL010001572         1828 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_190656, whole genome shotgun sequence.
ACCESSION   DASQSL010001572 DASQSL010000000
VERSION     DASQSL010001572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1828
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190656"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..205
                     /locus_tag="VE844_16005"
                     /pseudo
     CDS             1..205
                     /locus_tag="VE844_16005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019918658.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
     gene            complement(228..1403)
                     /locus_tag="VE844_16010"
     CDS             complement(228..1403)
                     /locus_tag="VE844_16010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013374977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAzo13 family transposase"
                     /protein_id="HZC02794.1"
                     /translation="MDERIRRLWAATEAQALGWGGVTAVSAATGLSRTTITAGLIETQ
                     RRAAGEAETFTTSRLRRPGGGRKKLTQTDRTLRCDLESLVDPATRGDPQSPLRWTCKS
                     TARLAAELQARGHRVSIRTVACLLHDLDYSLQVNRKTTEGRQHPDRKAQFEHINQQIQ
                     SHQQQRQPVISVDAKKKELVGDFKQGGREWQPTGQAERVRVHDFEDPDRGKAIPYGVY
                     DVTANLGWVSVGTDHDTAEFAVATIRQGWRQMGMHTYPHVQTLLVIADAGGSNGWRTR
                     LWKAELQRLANALGLTIAVCHLPPGTSKWNKIEHRMFAHITQNWRGRPLISHEVIINL
                     IGHTTTKTGLQIRAELDTQSYPTGRKITNEEFAQIQLQCDAFHGEWNYKILPKGPVN"
     gene            complement(1604..>1828)
                     /locus_tag="VE844_16015"
     CDS             complement(1604..>1828)
                     /locus_tag="VE844_16015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02795.1"
                     /translation="PSSLGNPRLSTVGNATRYALSLIRIQTSALVLLLAGQSRRAVSR
                     FVSQEAIAGNIFKVDYAVAQAGAAAADDGW"
BASE COUNT          372 a          514 c          500 g          442 t
ORIGIN      
        1 ggataccttg ggactgatct cgagctcatt tggcttgtgg atgggggcca aggagggcga
       61 ttcggtagag ctttgccatc ctgagcgcta tcgttacatc aatctacaat ttcaggatga
      121 cctattagta ggggcgacgg ccttagggct cacccagcat gtcggtgtgc tccgaggatt
      181 gattcaaagt aaaatacgac ttaagtaatc gcgcaaaaat aacttggtca attaaccggt
      241 ccttttggga gaatcttata gttccattca ccatggaaag catcgcactg gagttggatt
      301 tgagcaaatt cttcgttcgt aatcttgcgg ccggtaggat aggactgggt gtcaagttcc
      361 gcccggatct gaagacccgt tttcgtggtg gtatggccga ttaagttaat gatgacctca
      421 tgactgatca ggggtcggcc acgccaattc tgcgtgatat gggcaaacat ccgatgttca
      481 atcttattcc acttactggt ccccggcggc aaatggcaca ccgcaatggt caggcccagc
      541 gcattggcca agcgttgcaa ctccgccttc cacagccgtg tgcgccagcc gttactgccg
      601 cccgcatcgg cgatgaccag cagcgtctgt acatgcggat aggtgtgcat gcccatctgt
      661 cgccacccct ggcggatcgt cgcgaccgca aattcagcgg tatcatggtc ggtaccgacg
      721 ctgacccagc ccagattggc cgtcacatca tagacaccat aggggatcgc cttgccccgg
      781 tcggggtcct caaagtcatg gacacgcacc cgctctgctt gcccggtcgg ttgccattca
      841 cgcccgcctt gcttgaaatc acccaccaat tctttcttct tcgcatccac cgaaatgacc
      901 ggctggcgct gctgctgatg actttgaatc tgttggttaa tatgttcaaa ctgcgccttg
      961 cgatcgggat gctgtcgccc ttcagtggtc ttgcggttga cttgtagact atagtccaaa
     1021 tcgtgcagca ggcaggcaac ggtgcggata ctcaccctat gaccacgggc ttgcagttcc
     1081 gccgctaatc tcgccgtgct tttacacgtc cagcgcagcg gtgattgggg gtcgccacgc
     1141 gtggccgggt cgaccaagga ctccaggtcg caccgcaaag ttcggtccgt ctgtgtgagc
     1201 tttttacgac caccaccagg ccgccgcagg cgcgaggtgg taaacgtttc cgcttcgcct
     1261 gcggcacgac gttgggtttc aattaacccg gccgtaatcg tggtacggga aaggccggtg
     1321 gcggccgata ccgccgtgac cccaccccag cccaaagctt gggcttccgt tgccgcccag
     1381 agtcggcgta tgcgttcatc catatagggg ctcagcgcat cgtatttttg cttgaggatg
     1441 gctattgcat gcttcactcg caaagactaa tccaaacatg ccaatattgt ccagtttatt
     1501 tttgcgcgca ttctaagcaa cagatatgga acactacccc tttttacatc tcgtcggctc
     1561 gtcggtctga ggcgaagcct cgttagacaa taattgtagc ggctcaccag ccgtcgtcgg
     1621 cggctgcagc gccggcttgg gcgacagcgt agtctacttt aaatatgttt cctgctatcg
     1681 cctcctgaga tacaaagcgg ctgactgcgc gtctgctttg gccagcaagt agtaggacca
     1741 gggctgaggt ttgaatgcgg attagcgaaa gcgcgtacct cgtagcgttt cccactgtgc
     1801 tcaggcgtgg attccccaaa ctggacgg
//
LOCUS       DASQSL010001573         1513 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_35714, whole genome shotgun sequence.
ACCESSION   DASQSL010001573 DASQSL010000000
VERSION     DASQSL010001573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1513
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35714"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1329)
                     /locus_tag="VE844_16020"
     CDS             complement(<1..1329)
                     /locus_tag="VE844_16020"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015745240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HZC02796.1"
                     /translation="MIAPHALGGFPILSLTLFLPLIGALIIIFAFRREQTQAIKNFAF
                     AVTLIDFLVSLPILLAFDTGTHQFQFVERAQWIDAIGVEYFLGVDGISLLLVFLTTLL
                     GAIAVICSFTAIEEREKEYYFSLLFLQTGMLGVFMALDFFLFYVFWEVMLVPMYFLIG
                     IWGGARKLYAAIKFFLYTLFGSVFMLLAILAIYFMHYAQTGVLTFNFLELLNTNIDPT
                     HQLWLFLAFFLAFAIKVPMFPFHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFVRFSL
                     PLFPVASQTFVPLMAFLAIVGIIYGALVAMAQPDLKKLVAYSSVSHLGFVMLGIFTLT
                     PEGMQGAILQMINHGLSTGALFLIVGMVYERRHTRLIADYGGLAKQMPIYAALFGITM
                     FSSIGLPGLIGFIGEFLILIGAFKWNWKLAAFAATGVILSAVYMLWMFQRV"
BASE COUNT          412 a          406 c          448 g          247 t
ORIGIN      
        1 gacccgctgg aacatccaca gcatgtaaac cgccgacagg atcacgccgg tggcggcaaa
       61 cgcggccagc ttccagttcc acttgaacgc gccaatcagg atcaggaact caccgatgaa
      121 gccaatgagc cccgggagcc cgatcgacga aaacatcgtg atcccgaaca gcgctgcgta
      181 gatcggcatc tgcttggcaa gaccgccgta atcggcgatc aaacgcgtat ggcgacgctc
      241 atacaccatg ccgacgatca aaaacagggc gcccgtgctg aggccatggt tgatcatctg
      301 caaaatggcg ccctgcatgc cctccggcgt gagggtaaag atgcctaaca tcacaaaacc
      361 caggtggctc acactcgaat aggccacgag ttttttgagg tccggctgtg ccatcgccac
      421 caaggcgcca tagatgatgc ccacgatcgc caggaaagcc atcaagggca caaaggtttg
      481 actcgccacc gggaacagcg gcaggctgaa acgcacaaaa ccgtaggtgc ccattttcag
      541 cagaacgccg gccagaatga cgctaccggc ggtcggcgcc tccacatggg catccggtaa
      601 ccaggtgtgg aatgggaaca tcggcacctt aatggcaaag gccagaaaga atgccaagaa
      661 tagccaaagc tggtgcgtgg gatcgatgtt ggtatttagc aactccagga agttgaaggt
      721 taacacgccg gtttgggcgt aatgcatgaa atagatggcg agaatggcca gcagcatgaa
      781 gacactgccg aacagggtgt acagaaaaaa cttaatggcg gcatacagct ttcgtgcgcc
      841 gccccagatg ccaatcagga agtacatggg gacgagcatg acttcccaga agacgtagaa
      901 caggaaaaaa tccagggcca tgaagacgcc gagcataccg gtctggagga agaggaggga
      961 aaagtagtac tctttttcgc gctcctcgat ggccgtgaag gaacagatca cggcgatggc
     1021 cccgagcagc gtggtcagaa acacgagcag caggctgatc ccgtccacgc cgaggaagta
     1081 ctcaacgccg atggcatcga tccattgcgc ccgctcgacg aactggaatt gatgcgtgcc
     1141 ggtatcgaag gcgagcagaa tggggagcga gaccaggaag tcgatcagcg tcacggcaaa
     1201 ggcgaaattc ttgatggctt gggtctgctc gcgacgaaag gcgaagatga tgatgagagc
     1261 cccgatcaag gggagaaata gcgtgaggga gagaatgggg aatccgccga gcgcgtgcgg
     1321 ggcgatcatc aatgtgctcc tcaataaaag accggtgccg agggctgact cgcaggtgcg
     1381 cttcgctcag ccctcagcac tcagtcctat gttgttccat cagaagaaga cgtaggccgt
     1441 cacaatcacg aagagtccga gcaccatggc cagtatgtaa ttttgtacga accctgtctg
     1501 cagcagccga aac
//
LOCUS       DASQSL010001574         1468 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_134528, whole genome shotgun sequence.
ACCESSION   DASQSL010001574 DASQSL010000000
VERSION     DASQSL010001574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1468)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1468)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1468
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134528"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1293)
                     /gene="ilvA"
                     /locus_tag="VE844_16025"
     CDS             complement(<1..1293)
                     /gene="ilvA"
                     /locus_tag="VE844_16025"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018138810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004794 - L-threonine ammonia-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HZC02797.1"
                     /translation="MLEHYLKMILTARVYEVARKTPLDLTSELSRRLDNHVWLKREDL
                     QPVFSYKLRGAYNLMAHLSPEERKRGVITASAGNHAQGVALAAQRLQIPALIVMPKTT
                     PEIKIAAVRRLGAEIVLHGNTYDDASDYAQRLVEEKRLAYVPPYDHPLVIAGQGTVGK
                     EILEQHPGDLHSIFVPVGGGGLIAGIAAYVKNLRPEIKIIGVESDEAPGMKRALEARH
                     RVILDHVGIFADGAAVRQVGEEPFRIAQKYVDEVLIVTTDEICAAVKDTFEDTRSVPE
                     PAGALALAGLKQYVARERLVGQNLVAIFSGANVNFDRLRHIAELAELGEQREALLGVT
                     IPERPGSFRAFCHAIGPRFITEFNYRYTDASEAHVFAGIQLRHGVKEKDALIAQLGEK
                     GYPVVDLSNNEMAKLHVRYMVGGHGGPVEHELLYRFEFP"
     gene            complement(1286..>1468)
                     /locus_tag="VE844_16030"
     CDS             complement(1286..>1468)
                     /locus_tag="VE844_16030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007904341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZC02798.1"
                     /translation="QYALKQRALSLGWLEADIEIIDTELGLTGTTAYHREGFKELLTK
                     VTLGQVGIIMVFYVYA"
BASE COUNT          294 a          445 c          427 g          302 t
ORIGIN      
        1 gggaaactcg aaacgataaa ggagttcatg ctccacgggc ccgccatgtc ctcccaccat
       61 atagcggaca tggagcttcg ccatctcgtt gttggagaga tcgactacgg gatagccctt
      121 ttctccaagc tgagcgatca aagcgtcttt ttccttgacc ccatggcgca gctggatccc
      181 cgcgaataca tgggcctcgc tggcatcggt atagcggtag ttgaactcgg taatgaagcg
      241 cgggccgatg gcgtgacaga aggcgcgaaa actgcccggt cgctccggta tcgtgacccc
      301 caacagggcc tcgcgctgct cacccagttc cgcgagctca gcgatatgac gcagccggtc
      361 gaagttgaca ttggccccgc tgaagatagc gaccaggttc tgtcccacca atctttcccg
      421 ggccacatac tgcttaagcc cagccaacgc caaggcgccg gcaggctcag gcaccgagcg
      481 ggtatcctcg aaggtatcct tgaccgccgc acagatctcg tcggtagtga cgatcaggac
      541 ctcgtctacg tatttttgag cgatccggaa cggttcttca cctacttggc ggaccgccgc
      601 cccatcggcg aagatcccga catgatcgag gatgacgcgg tgccgagcct cgagcgcccg
      661 tttcataccg ggcgcctcat ccgactcgac gccgatgatc ttgatctcag gtcgcagatt
      721 cttcacgtag gctgcgatcc ctgcaatcaa gccgccgcct ccgaccggca caaagatgct
      781 gtggagatcg cctgggtgct gctcgaggat ctccttgccc accgtgccct gaccggcgat
      841 cacgagcggg tgatcatagg ggggcacata ggcgagtcgc ttctcttcca ccagccgctg
      901 ggcatagtca ctggcgtcat cgtaggtgtt gccatgcagc acgatctcag cgcccaaccg
      961 ccgtaccgcg gctatcttga tctcgggagt ggtcttgggc atgacaatga gcgcggggat
     1021 ctgcaagcgc tgggcggcaa gcgctacccc ttgggcgtga ttgccggcag aggcagtgat
     1081 caccccacgc ttgcgctcct ccggagacag gtgcgccatc aaattataag caccgcggag
     1141 tttataggag aataccggct gcagatcctc ccgcttgagc cagacgtggt tatcaagccg
     1201 ccttgatagc tcggaggtga gatcgagcgg tgtcttccgg gccacctcat agacccgggc
     1261 agtcaggatc atcttcagat aatgctcaag catatacata aaataccatg atgatcccga
     1321 cctgtcccag agtgactttg gtgaggagtt ctttgaagcc ctcgcgatgg tacgcggtgg
     1381 tgcctgtcag tccgagctcg gtgtcaatga tttcaatgtc cgcttcgagc cagccgaggc
     1441 tgagggcgcg ttgtttgagc gcgtactg
//
LOCUS       DASQSL010001575         2491 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_134534, whole genome shotgun sequence.
ACCESSION   DASQSL010001575 DASQSL010000000
VERSION     DASQSL010001575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2491)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2491)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2491
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134534"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..347
                     /locus_tag="VE844_16035"
     CDS             <1..347
                     /locus_tag="VE844_16035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02799.1"
                     /translation="VAIGLTFALSVLLVVTGRVSILAQTTTLLLTLAFFMAHLSLIIV
                     RKQQSSSAEIFRVPGFIPYLGLIFCALLLTHFPLEAYSRAAVLIGISTVVYLAYFKTR
                     ATGALGSIFKGP"
     gene            367..1749
                     /gene="cysS"
                     /locus_tag="VE844_16040"
     CDS             367..1749
                     /gene="cysS"
                     /locus_tag="VE844_16040"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014647791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HZC02800.1"
                     /translation="MTLHLYNTLTRRKELFTPADPHRVTVYVCGPTVYSYPHIGNARA
                     AVVFDLLYRILRERFPKVVYARNITDVDDKINASAKAAGVPISVITEKYTAIYHEDMA
                     ALGVLAPVVEPKVTDHLPDIVCLIERLIERGHAYVVEGHVLFDINTYPDYGRLSGRDR
                     EEMIAGARVEVAPYKRDPADFVLWKPSTPDLPGWDSPWGRGRPGWHIECSAMIERHLG
                     ETIDIHGGGQDLIFPHHENEIAQGTCAHNGKLYCRYWLHNGFVTVAEEKMSKSLGNVL
                     LVHDLLKEAPGEAIRLVLLSSHYRQPLDWTDTALHQAKAGLDRLYGTLRRLEDVVIGI
                     EDKAVSAEFNEALEDDMNTPKALAELFQIAKLANTATEIEELRRLKGQLLAGGDQLGL
                     LQADPEDWFSRSAHASIDAAEIERLIAERNAARSAKNYALADQIRDELARQGVRIEDG
                     PEGTRWRRAG"
     gene            1779..2330
                     /locus_tag="VE844_16045"
     CDS             1779..2330
                     /locus_tag="VE844_16045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016873952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HZC02801.1"
                     /translation="MATRPKATIKDLYRLPEDGKAEIVNGELISMALRGFLPGRAAGT
                     IYLSLREYERSTKAGFAFPDNTGFKVELPHRESFSPDCAFYTGKPTGMKFPEGAPIFA
                     AEVRSEGDYGPGAEQAIADKRADYFAAGTRVVWDVDLLSEEAVRVYRASEPNRPTVYR
                     RGEVAEAEPALPGWSMPVDELFA"
BASE COUNT          523 a          706 c          715 g          547 t
ORIGIN      
        1 gggtcgcgat cggcttaaca tttgccttaa gcgtgctgct ggttgtgacc ggtcgggtga
       61 gtatcctggc gcaaaccaca acattgctcc tgaccctggc ctttttcatg gcccacttga
      121 gccttatcat agttcggaaa cagcaatcga gctcggcaga gatcttccgc gtacccggct
      181 tcatccccta tctaggcctg atcttttgtg cgctcttgtt gacccacttc cccctagagg
      241 cttactcgcg tgcggccgtc cttatcggga tcagcaccgt ggtatacctg gcttacttca
      301 aaacgcgcgc aactggggca ctgggttcga tttttaaggg accttagcaa gaggataggt
      361 ttaaagatga cattacacct gtacaatacg cttaccagac gcaaggaact attcaccccc
      421 gccgatcccc accgggtgac ggtctatgtc tgcggtccca ccgtctatag ctatccgcat
      481 atcggcaacg cccgcgctgc cgtggtcttc gatctgctgt atcgaattct acgcgagcgt
      541 ttccccaagg tggtctatgc ccgcaatatc accgatgtcg atgacaagat caacgcctcg
      601 gccaaagcgg caggcgttcc gatctcggtg atcacggaaa aatacaccgc catctatcat
      661 gaagacatgg cggccttggg ggtgctggcg cccgtcgtcg aacccaaggt caccgatcac
      721 ctccccgaca tcgtgtgcct catagaacgg ctcatcgagc gaggtcacgc ttatgtagtc
      781 gagggtcatg tgctcttcga tatcaatact taccccgact atggccggct ttcgggccgc
      841 gaccgggagg agatgatcgc tggggcccgg gtcgaggtcg cgccctataa gagagatccc
      901 gccgattttg tcctctggaa accctcgacc cccgatctac cgggttggga cagcccctgg
      961 ggacgcggac gaccgggttg gcatatcgag tgttcggcca tgatcgaacg gcatctgggc
     1021 gagactatcg atatccacgg cggcggtcag gatctcatct ttccccatca cgagaacgag
     1081 atcgcccagg gcacctgcgc ccataacggc aagctctatt gccgctattg gctgcacaat
     1141 ggctttgtca ccgtggctga agagaagatg tcgaaatcgc tgggcaatgt cctgctcgtg
     1201 cacgatctgc tcaaagaggc ccccggtgag gctattcgct tggtcttgtt aagctcccat
     1261 tatcgccagc ccctggattg gaccgatacg gccctgcatc aagccaaggc agggctcgat
     1321 cgtttgtatg gcaccttacg gcgcttggaa gacgtggtga tcgggattga agataaggca
     1381 gtatccgctg aattcaacga ggccctagag gatgatatga acacacccaa ggcactggcg
     1441 gaattgtttc agattgcaaa gctcgccaat accgctacgg agatagagga gttacggcgc
     1501 ttaaagggtc agttgttagc cgggggggat caactcggtc ttctgcaagc ggatcccgag
     1561 gattggtttt cgcgatctgc gcatgcctcg atcgatgcgg ccgagatcga gcgacttatt
     1621 gccgagcgca atgccgcccg atcggcgaag aactatgcgc tggccgatca gatccgcgat
     1681 gaactggcga gacagggggt ccgaatcgaa gatggaccag agggtactcg gtggaggagg
     1741 gcggggtaaa taagccaatg tgtttatgag gttcttatat ggcgacaaga cccaaagcaa
     1801 cgattaaaga tctctaccgc ttgcctgagg atggcaaggc cgagatcgtt aacggagaac
     1861 tgatctctat ggctctaagg ggatttttgc ccggccgcgc agcgggcacc atctacctaa
     1921 gcctgcgcga atatgagcgt agcactaagg ccggtttcgc cttcccggat aacacaggct
     1981 tcaaggtcga gctacctcat cgcgaatcgt tcagccctga ttgcgccttt tataccggca
     2041 agcccacggg catgaagttt ccggaaggcg cgcccatctt cgctgctgaa gtcaggagtg
     2101 aaggcgacta tggccctggg gctgagcagg cgatcgcgga caagcgggcc gattactttg
     2161 cagccggaac ccgtgtggtc tgggatgtgg atttgctgag tgaagaggcc gtaagggttt
     2221 accgcgcaag cgagccgaac cgacccaccg tctatcgccg gggtgaagtg gccgaagccg
     2281 aacccgccct gcccggctgg agcatgccgg ttgatgagtt gttcgcttag cctcttactt
     2341 tgatcgtgcg catagcgcac gctacgcttg ctgcgctgca tctgcgagcc gagatcgtca
     2401 ttttccaaat cagtcatcgt cgctagcttc ccgatgactc ccgcattcgg agcctcctcg
     2461 tagagttccc ggtagcgcat catgaccatg t
//
LOCUS       DASQSL010001576         4563 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_171052, whole genome shotgun sequence.
ACCESSION   DASQSL010001576 DASQSL010000000
VERSION     DASQSL010001576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4563
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171052"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..325
                     /locus_tag="VE844_16050"
     CDS             <1..325
                     /locus_tag="VE844_16050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006101724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HZC02802.1"
                     /translation="PRLAVRDQTIILVDDGLATGATMRAAVVALRQQQPRRIVVAVPV
                     AAPETCDEFRAEVDDIVCAITPPLFYAVGLWYQDFSQTSDEEVRALLEHAAQPTTAST
                     VSHSI"
     gene            complement(418..1368)
                     /locus_tag="VE844_16055"
     CDS             complement(418..1368)
                     /locus_tag="VE844_16055"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /protein_id="HZC02803.1"
                     /translation="MKTRRSFDPRIVLPLLSLCLFLIASAAVYYLLQELSYEQVIAEL
                     STLSNKQIAFAAIFTLGSYAALSGYDWSALSYLGRRLPYRAVALGAFCGCAFANTIGL
                     NVLSGGSVRYRIYMPFGLGSLEVICITVFAMIAYGVGISVVAGVALIIDPWLVANLFG
                     ASPHLLKGIGILVLIAFIAFVALTFLRQTPFHLGSWRVQLPNGHITLAQFVFSVMEIL
                     CAGGCLYVLISEVKVPFLSFLVVYAVSVVASMASYVPGGLGVFEGFMLLTFRHSIPAE
                     SLATGLLLYRAIYYLAPLMLATLILAGREVTDRILPLRRS"
     gene            complement(1358..2761)
                     /locus_tag="VE844_16060"
     CDS             complement(1358..2761)
                     /locus_tag="VE844_16060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011506024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HZC02804.1"
                     /translation="MNTSKTTVPRILLVDDDPDMREALSVWLRKEGFEVNTATSRHEA
                     LTQVETVRPHMVVTDLVMEEEDSGMKLLTEIHRKNPLLPVIMLSGQAKPDQAFEAAHL
                     GLSAFLIKSPEQFSQEKLKERLIKHIQKTLCILGIEDDGRDRGFGKDIVYRSAKMAEL
                     MEQARLLAETDITVFINGETGTGKELLAKSIHQASPRRDKSFIGINCGAIPEQLLESE
                     LFGHEKGAFTGAATRHEGLFQAANGGTLFLDEIGDMPLGLQVKLLRVLQEFQIRPVGS
                     VRSIPIDVRVISATHNNLEEAVRVGEFREDLYYRLNVVPLYVPSLAERREDIPLLLDH
                     FLAWLAKRQAKEKKRFAPDAMEYLVGMPWPGNVRQLVNVVELCATLTTTEIIPLSMAQ
                     RALRDEPGQLQTLKDAKQAFERDYLISVLRITEGHVANAARIAGRNRTEFYKLLNQHN
                     IDPTGFRKNTRAADSED"
     gene            complement(2797..>4563)
                     /gene="glmS"
                     /locus_tag="VE844_16065"
     CDS             complement(2797..>4563)
                     /gene="glmS"
                     /locus_tag="VE844_16065"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013034802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HZC02805.1"
                     /translation="RLEYRGYDSAGIAVVNSEDYLERFRVLGKVKELEDNLARNPLKG
                     TLGIAHTRWATHGKPSTRNAHPHISRNRVALVHNGIIENHVELRTRQQQWGYEFTSET
                     DTEVVVHEVNEHLERGKDLLVAVIDTVAELEGAYALGVISVSEPDRLVAARRGSPLII
                     GVGIGEYFIASDVFALLPVTQRFIFLEDGDVADIRRDQIFLYDAQGRQVDRPIALSEL
                     TADVADKAGYRHYMLKEIFTQPKAVADTLEGRMVDGRVLDEAFGMGAQAVFEQVRAVQ
                     IVACGTSYHAGLVARYWMEAIAGIPCHAEVASEFRYRKHAVTRGTLFVTISQSGETAD
                     TLAALRQAKLLGYTYSLGICNVPESSLTRESDLVFMTRAGPEIGVASTKAFTTQLVAL
                     MLLVIALARHHGLAAETEKKLVWHLESLPGKLNLVLELNEQVKRLSEQIAPKHHTLYL
                     GRGVMYPIALEGALKLKEISYIHAEAYPAGELKHGPLALVDEDMPVIAVAPNNELLEK
                     LKSNLEEVRARGGRLYVFADLTAGMQGSTGTEVLNIAAVDDLIAPIIYTVPLQLLAYH
                     VAVLKGADVDQPRNLAKSVTVE"
BASE COUNT         1052 a         1348 c         1213 g          950 t
ORIGIN      
        1 cccgcggctc gcggtgcgcg accaaaccat catcctcgtc gatgatggac ttgcgacggg
       61 ggccacgatg cgcgcggcgg tcgtggcctt aagacagcag cagcccaggc gcatcgtcgt
      121 cgcagtgcct gtggcggcgc ccgagacctg cgatgagttc agagcggaag tcgacgacat
      181 cgtgtgtgcc atcaccccac ctctgttcta tgcagtgggt ctatggtacc aggacttctc
      241 gcagaccagt gatgaggagg tacgcgcgct gctcgaacac gcggctcaac cgaccactgc
      301 aagcactgtg agtcattcca tctgacccac ttcgggtcca ctgaacctcg aggagatcgc
      361 cgtatggcga aatgacttga aggtcgccgt agtcacggga tcggactccg gctataccta
      421 cgatcgccgc agcggcagaa tccgatcggt cacctcgcgt cccgctagaa tcagggtcgc
      481 cagcatcaac ggcgccagat aataaatagc ccgataaagc agcaaccccg tggccaggga
      541 ctcggcaggt attgagtgcc tgaaggtaag gagcataaag ccctcgaaca cgccgagtcc
      601 gccaggtaca taactcgcca tacttgctac cacgctgaca gcgtagacta ccaagaaact
      661 gagaaaaggt accttcacct cggatattaa gacatagaga cagcctcccg cacacaggat
      721 ctccatcact gaaaagacaa actgagcgag ggtgatgtgt ccattgggca attgcacgcg
      781 ccaggatccc aaatgaaatg gagtttgcct gaggaaggtc aaggccacaa acgctataaa
      841 ggcaatgagc accaggatcc caatgccttt aagcaggtgc ggggaggctc cgaatagatt
      901 tgcgaccaac cagggatcga tgatcaaggc aacgccagcg accacagaga tgccaacacc
      961 gtaggcaatc atcgcgaaga cggtgataca gatcacctcc aaactgccta gcccgaaggg
     1021 catatagatg cgatagcgca cagagccgcc tgagaggaca tttagaccta tagtattggc
     1081 gaatgcacaa ccacaaaagg cgcctagcgc cacggctcgg taaggcaacc ggcggcccaa
     1141 gtagctgagc gccgaccagt cgtaaccact gagcgccgca taactgccta gagtaaagat
     1201 cgcagcaaag gcgatctgtt tgttggagag cgtgctcaat tcagcgatca cttgctcata
     1261 actgagctcc tggagcaggt aatagactgc cgccgaggcg attaaaaaca agcacagcga
     1321 taggagcggc aggacaatcc tcgggtcgaa cgacctccta gtcttcactg tcggccgctc
     1381 tggtattctt tcgaaaaccc gtaggatcga tattatgctg gtttaacagc ttatagaact
     1441 ctgtccggtt gcgacctgca atgcgagcgg cattggccac atgaccttca gtgatccgca
     1501 gcacgctgat gagataatcc cgttcaaagg cctgcttggc gtccttaagc gtttggagct
     1561 gccccggttc atcgcgcagg gcacgttgtg ccatgctcag tggaatgatc tcggtcgtgg
     1621 taagcgtggc gcaaagctcc accacattga ccagttgccg gacatttccc ggccaaggca
     1681 tccctaccag atattccatg gcatcggggg caaaccgttt tttttcttta gcttggcgtt
     1741 tcgcaagcca cgcgagaaaa tgatcgagca gcaggggaat atcttcacgc cgctcggcta
     1801 ggcttggcac atagagcggc acgacattca accggtaata gagatcctcg cgaaattcac
     1861 ccactctcac cgcctcttca agattattat gagtagctga aataacccta acatcgatgg
     1921 gtatgctgcg gaccgatccc accggtctta tctggaactc ctgcagtacg cgcaggagct
     1981 tcacctgcag cccaagcggc atatctccga tctcatcgag gaacaaggtc ccgccattgg
     2041 ccgcctgaaa caagccttca tgccgggtcg ccgccccagt gaaggcgcct ttctcgtggc
     2101 cgaacaattc ggattccagc aattgctcag gaatagcccc gcagtttatt ccgatgaagg
     2161 acttatcgcg ccgtggactg gcttggtgga tagatttggc caaaagctcc ttgcccgttc
     2221 cggtctcgcc attgatgaat acagtgatat cggtctcagc caataagcga gcctgctcca
     2281 tcagctcggc catctttgcg cttctataga caatgtcttt gccaaaccca cgatcccggc
     2341 cgtcatcctc tatccctaag atacacaagg tcttctgaat atgcttaatc agccgctctt
     2401 tcagcttttc ctgactgaac tgctcgggag atttgatcag aaaggccgac aaccccaggt
     2461 gggccgcctc aaaagcttga tcgggtttgg cctgtccgct cagcatgatg accggcagca
     2521 agggattttt tctatggatc tcggtgagca atttcatccc gctatcctct tcctccatca
     2581 ccaagtcggt aaccaccata tgcgggcgca cggtctccac ttgggtcagc gcctcgtgcc
     2641 tcgaggtcgc ggtattgacc tcgaacccct cttttctcag ccacaccgac agcgcttccc
     2701 gcatgtcggg atcatcgtct accagtaaga tccgaggtac agttgttttt gaggtattca
     2761 ctggatttta tgataatctc cccagggcat ttagttttat tctaccgtga cggacttggc
     2821 aaggttgcgg ggttgatcca catcggcccc tttgagcacg gccacatgat aggccaggag
     2881 ttgcaaaggt acggtgtaga tgatcggggc gatgagatca tcgacagcag cgatattgag
     2941 cacctcggta cccgtcgagc cttgcattcc cgctgtaaga tcggcaaata catacagtct
     3001 gccgccgcgg gcccgcacct cctccagatt cgatttcagt ttttccagca attcgttatt
     3061 gggagccacg gcgatgaccg gcatgtcttc atcgaccaag gccaaagggc catgcttgag
     3121 ttcgcccgcc ggataggcct cggcatggat ataggagatc tctttgagct ttaacgcccc
     3181 ctccaaagcg atggggtaca taaccccacg tcccaaatac aaggtatggt gcttaggcgc
     3241 gatctgctcg gacaaccgct tgacctgctc attgagctca agcacgaggt tgagtttgcc
     3301 cggcaggctt tcaagatgcc acacgagctt tttctcggtc tcagccgcta acccgtggtg
     3361 gcgggccagg gcaatgacca ataacataag cgccaccagt tgcgtggtaa aggccttggt
     3421 cgaggcgacc ccaatctcag gccccgcccg tgtcataaag accagatccg actcgcgggt
     3481 cagggaactt tccggcacat tacagatccc caagctgtag gtataaccca agagcttggc
     3541 ttgccgcagc gcggccaagg tgtcggccgt ctcgcccgat tgcgagatgg tgacaaacaa
     3601 ggtgcctcga gtaacggcat gcttgcgata gcgaaattcg ctggcgacct cggcatgaca
     3661 ggggatcccg gcgatggcct ccatccagta gcgcgctacc agcccggcat ggtaactggt
     3721 gccgcaggcg acgatctgca ccgcgcgcac ctgctcgaat acggcttggg cccccatccc
     3781 aaaggcctca tctaaaaccc ggccatcgac catgcggccc tctaaagtat ccgccaccgc
     3841 tttgggctgg gtaaagatct ccttgagcat gtaatggcgg tagcccgctt tatcggcaac
     3901 atccgcagtc aactcggaga gggcgatggg ccgatctacc tgccttccct gagcatcata
     3961 gaggaagatc tgatcccggc gtatatccgc cacatcgcca tcctctaaaa agatgaagcg
     4021 ctgcgttacc ggcaacaggg caaacacatc cgaggcaatg aaatactcgc cgatcccaac
     4081 gccaatgatc agcgggctgc cgcgcctcgc agccaccaaa cggtccggct ctgaaacgct
     4141 gatgaccccc aaggcatagg cgccttccaa ttcggccacg gtgtcgatca ccgcgacgag
     4201 caagtctttg cctctctcta ggtgctcatt gacctcatgg accaccacct cggtgtccgt
     4261 ctccgaggta aattcatagc cccattgctg ctggcgcgtg cgcagttcca catggttttc
     4321 tatgatccca ttgtgcacca gcgccacgcg attgcggctg atgtgaggat gggcgttgcg
     4381 ggtgctaggc ttgccatggg tggcccagcg ggtatgggcg atcccgaggg tacccttgag
     4441 cgggttgcga gccaggttat cttccaattc tttgaccttg cccaagaccc ggaaccgttc
     4501 cagataatct tcgctgttaa cgacagcaat accagcagag tcataaccgc ggtactctaa
     4561 gcg
//
LOCUS       DASQSL010001577         1125 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_198691, whole genome shotgun sequence.
ACCESSION   DASQSL010001577 DASQSL010000000
VERSION     DASQSL010001577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1125
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198691"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..628
                     /locus_tag="VE844_16070"
     CDS             <1..628
                     /locus_tag="VE844_16070"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HZC02806.1"
                     /translation="CKGRSIAVTYGAPKSRTSAGQRASPGTVDRFPSSVSGFDSGWLA
                     SRPVARRPNPVTSGGMNDVQQIQVSRIIEAPVERVFALLADPDRHPDLDGTGMLRASR
                     THTVITEVGDVLIMDLNTEDHGAYQAQSVVTTYVRDRALGWSPGPVDGDPFGDTYTFT
                     LEPDGDDLTLVTLSYDWSAVTDEQLLAMMPQVSREDLTRSLDKLAAAL"
BASE COUNT          214 a          359 c          320 g          232 t
ORIGIN      
        1 ctgtaaggga cggtcaatag cggtcaccta cggcgcaccg aagagccgga ccagcgcagg
       61 tcaacgggca tcacctggca cggtagatag attcccaagc tctgtgagcg ggttcgattc
      121 tggttggctt gcttcccgtc cggtcgctcg ccgaccaaac ccggtaacgt ccggcgggat
      181 gaacgacgtt cagcagattc aggtctctcg gatcattgag gcgccggtgg agcgggtgtt
      241 tgccttgctc gctgaccccg accggcaccc tgatctggac ggaacaggga tgttgcgtgc
      301 ctcgcgaacc cacacagtga tcactgaggt tggcgatgtg ttgatcatgg acctaaacac
      361 cgaggaccat ggggcctacc aggctcaaag cgtagtgacc acctatgtcc gcgaccgtgc
      421 ccttggctgg tcgcctggcc cggtcgatgg cgaccctttc ggcgatactt acactttcac
      481 gctcgaaccc gatggcgacg atctcaccct ggtgaccctg tcctacgact ggtccgcggt
      541 cactgacgag caactgctcg cgatgatgcc ccaagtgtcg agagaggatc taacccgctc
      601 actcgacaag ctcgccgccg cgctgtagac cctcggagta cgctcaactt caagatcatc
      661 accagtccac gcacccggtg ctccgcttaa tgagtgtgta ccaccccaat ctgaacctct
      721 cttctcggcc tgctccgaga caggctcgcc ggccgcgttc gcccgtctgt ctgcggcaga
      781 ccgacagggc ggcgtgctgt tggcgtgcaa ctcttcccgc acagcttggt cagtgcctac
      841 ggcgcgcacg atagattaac atcaggccgt atccaggccg tgagacgtcg ggcagagatg
      901 agaacgggcg agaactgctg agatgcattt ccgctgttta ctggcttttc tcgctagatc
      961 gccaggtcag ccggtccggg tgagagatca cccagatctt cgccataacc agcgcattcg
     1021 gtagtggcta cccagaatca tcagtccgca gcttctaacc cttgcgactg gtgctcgaag
     1081 gggctgtcct tcctaagagg tttccaccgt atccccctca tctcg
//
LOCUS       DASQSL010001578         1028 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_148292, whole genome shotgun sequence.
ACCESSION   DASQSL010001578 DASQSL010000000
VERSION     DASQSL010001578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148292"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(37..723)
                     /locus_tag="VE844_16075"
     CDS             complement(37..723)
                     /locus_tag="VE844_16075"
                     /inference="COORDINATES: protein motif:HMM:NF013698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02807.1"
                     /translation="MEPIHQRVAGLDVHCMKHVLTVLIEDGDGNLIKYTREFGGFKGD
                     LRALVAWLTECQVELVILESTGIYWKSVFASLSVAGIPAWGVNAYPIKHVPGGKTDVA
                     DSEWLAQLGRFGLVRGSFIPPKDLRELRLVSRYRKKVSDMLAAEKNRRPLLLDDAGIK
                     LGGVVADINSVSAKRMIEGLIAGQAPEELATFDLGPLKHKREVLEAAMEGELSARHRL
                     VLESLQKHVH"
BASE COUNT          215 a          317 c          285 g          211 t
ORIGIN      
        1 cagataccga tccaagaggg cgagttgctc tagagactaa tgcacatgct tttgcaggga
       61 ttcgagcacc agccgatgac gtgccgacag ttcgccttcc atggccgcct ccaacacctc
      121 gcgcttgtgc ttgagtgggc ccaagtcgaa cgtggccaat tcctccggtg cctggccggc
      181 gatcagccct tcgatcatgc gctttgcgga gacgctgttg atatcggcta ccacgccgcc
      241 cagcttgata ccggcgtcgt ccaagagcaa gggccggcgg ttcttctcag cggcgagcat
      301 gtcggagacc ttcttgcgat aacgcgacac cagccgcaac tcacgcaagt ccttcggcgg
      361 gatgaaacta ccccgaacca ggccgaagcg cccgagttgg gccagccatt cggagtcggc
      421 cacgtcagtc ttacctccgg gtacatgctt gatggggtag gcattgaccc cccaggccgg
      481 aatgccagcg accgagaggc tcgcaaacac gctcttccaa tagatgccag tgctctccag
      541 aatgaccagt tcgacctggc attcggtgag ccaagcgacc aacgctctca ggtcgccctt
      601 gaagcccccg aattcgcgcg tatacttgat gaggttgcca tccccgtctt cgatgaggac
      661 cgtgaggaca tgcttcatgc aatgtacgtc gagtccagcg acccgttgat gaatcggttc
      721 catagttgtt ctcccatggt taaactagat agcgggagac ggcgggcaaa ccggccagta
      781 aacccttgtg ccgcagcgcg gcacaagcca ctttgacccg tgcgtcctgc aagttgaact
      841 tgcgaaacag tctggggtgc gaaccggccg tatcgggtct ggttaggcca cggggtgtga
      901 ccgccaaatg tactgcgacc tctcccctgc cgtcttccac cccgtatcgt gacataattc
      961 aacccccact ttcatgctcc ggggcgagcg aaataacgat cataattggt taggtgatta
     1021 tcagctag
//
LOCUS       DASQSL010001579         1027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_25459, whole genome shotgun sequence.
ACCESSION   DASQSL010001579 DASQSL010000000
VERSION     DASQSL010001579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25459"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..703)
                     /locus_tag="VE844_16080"
     CDS             complement(<1..703)
                     /locus_tag="VE844_16080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02808.1"
                     /translation="MVGVAYRGQIPLEDIKVDFEVEPVELPNAIGFAVREVVTLTGQL
                     SETQRLRLQRAAQYCPVGQALTKGSMEIEDEVQWSSGEVTAASPAPAALQRLERDLPA
                     IPPGWVHGRYLLDTKEYDETGAMVHEGEVKVYVTCKNLTHSSRWSLLSGHSSEGWVPP
                     PFPLAQGAWAASTVVTLSRLLSQGEEGTNDLRAEITLGAGGPRGQSQRNAAEGMVGRR
                     RVLRRVSVPGTPRTTP"
BASE COUNT          215 a          312 c          276 g          224 t
ORIGIN      
        1 tcggagttgt gcgtggggtt cccggtacac ttacccgacg taatacccgg cggcggccaa
       61 ccataccctc cgcagcatta cgctgggatt ggcctctggg gccgccggcg cccagagtga
      121 tctccgcccg caggtcatta gtgccctctt ccccttggga caacagccgg ctcaaggtaa
      181 ctacggtcga cgcagcccat gcgccctggg ccagcgggaa aggcggtggc acccatccct
      241 cggagctatg gcccgagagt aaggaccagc gacttgaatg ggttaaattc ttacaggtaa
      301 cataaacctt aacctcgcct tcgtgcacca tggctcccgt ttcgtcatac tctttggtat
      361 cgaggaggta gcggccgtgc acccatcctg gagggatggc cggtagatct ctctccagcc
      421 gctggagggc tgccggcgct ggtgaggctg ctgttacctc acctgagctc cattgcactt
      481 catcctcgat ctccattgag cccttggtga gcgcctggcc cacaggacag tactgggcag
      541 cccgctgcag ccggagacgc tgtgtttccg agagctggcc tgtcaaggtg accacttccc
      601 taacggcaaa cccaatggca ttgggaagct ccacaggttc cacctcaaaa tcgaccttga
      661 tgtcttcaag aggaatctga ccacggtagg caacgcctac cacggtgact actgttcaag
      721 ccgcccaagc tgctactgac aaatattgag gaggaggccc caccatatcc agatcgggat
      781 ttgggatacc ggctacgaaa gaccatggtc ctctctggcc agacccagca ccaatcaccg
      841 taagcactga ttgttctcca atgggccggg caataatgtt ccgctgaagt cggtccgtca
      901 ttgtggtacg agtgtcttca gtcatcagtc acctcaatgt taattgggaa tttcccaaga
      961 ggggtctttc gccgtcagcc atcaagtgcc tccaaagccg gtacgttatt taccctaaat
     1021 tgttgat
//
LOCUS       DASQSL010001580         1365 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_161219, whole genome shotgun sequence.
ACCESSION   DASQSL010001580 DASQSL010000000
VERSION     DASQSL010001580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1365)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1365)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1365
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161219"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(446..>1365)
                     /locus_tag="VE844_16085"
     CDS             complement(446..>1365)
                     /locus_tag="VE844_16085"
                     /inference="COORDINATES: protein motif:HMM:NF015457.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02809.1"
                     /translation="GRNSLGPMRLAVEKLRRRTTVSTPIVVVHTDLPQNDFGSLFALV
                     EASPESYLHSVENVFALAAGKSFYERIFPDGYLSLGWTAISVHWLSKVPCNIPDHVYA
                     QRARQRVRKAYAEQASEDWQRFLGHRARELGTGGELIVVAVTTDDTGNTGGESLMDLT
                     NEPLLAMVEAGFIRPEEYTRMNMPAYHRTMEEFTEPLHSGPLTEDLILKEGIRAEFSD
                     QLWPAYEQTGDANGFAASYTEFMRAFTEAPLFAGLDADRTPADRERIANEYFKRMRSL
                     IEANPKRARWDWHVALLRVARRPATVIIH"
BASE COUNT          242 a          406 c          411 g          306 t
ORIGIN      
        1 ctaggctgag acgcacacgg catcccatgc gttgatctcg cgtatctcgt cgcctacttt
       61 tgcctgggct ccgccgctga cgagaacgca gaccccctgt tggatctcgt gctagtgccc
      121 ggacgagatg cggaagggca gggcgaccct gaagcagctt gtcggagtgg tgccaaaaca
      181 tcctccgctt atcgccgatg ctcttcctta tcccgagtat tccgcttatg ttagtggttg
      241 ctgggcgttg caggggtttg caactcccgc atagataagg ggttttctgt tccctgcctt
      301 gcccactgtt gcagggcatt gcgtccgggt tagggtcaaa ctagggtcaa gtggacgatc
      361 cccgtgtgcg tctgccggat tcctaaggca cccttccagt agatgtggtc ctcaagtcat
      421 gtaccgaatg ttttcgccag gcacatcagt gaataatgac ggttgcgggt cttcttgcta
      481 cgcgaaggag cgccacgtgc caatcccacc tggcgcgctt ggggttggcc tcgatcaagc
      541 tcctcatgcg cttgaagtac tcgttggcga tccgctcgcg atccgcgggt gttcgatccg
      601 catctaatcc tgcgaacagg ggcgcctcag tgaacgcccg catgaactcg gtgtacgagg
      661 cggcgaaacc gttagcgtcg cccgtctgct cgtacgcggg ccacaactga tctgaaaact
      721 ccgccctgat accttccttc aggatcaggt cttcggtgag agggccggaa tgtagaggtt
      781 cggtgaactc ctccatggtg cggtggtagg cgggcatgtt cattcgcgtg tactcctcgg
      841 gccggatgaa gccggcctcg accatcgcta gcagaggttc attcgttagg tccatcaggg
      901 actcgccgcc ggtgttgccg gtatcatccg ttgtgaccgc gaccacgatc agctcgccac
      961 cggtccccag ctcgcgggcc cggtgaccga ggaaccgctg ccaatcctcg ctcgcttgct
     1021 cggcgtaagc ctttcgcacc ctttgtcggg ctcgctgggc gtagacgtga tccggtatgt
     1081 tgcatggaac cttgctcagc cagtgcaccg agatggcggt ccaacctagc gagaggtaac
     1141 catccgggaa gatgcgttcg tagaacgatt tgcctgccgc tagcgcgaag acattctcta
     1201 cgctatgcag gtaactctct ggcgaagcct cgaccaaggc gaagagcgag ccgaagtcgt
     1261 tctggggcaa gtcggtgtgg acaaccacta tcggggtgga gaccgtcgtc cgccgtcgta
     1321 acttttctac ggcgaggcgc atcggtccca gagagttgcg cccct
//
LOCUS       DASQSL010001581         1477 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_79193, whole genome shotgun sequence.
ACCESSION   DASQSL010001581 DASQSL010000000
VERSION     DASQSL010001581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1477)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1477)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1477
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79193"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            640..885
                     /locus_tag="VE844_16090"
     CDS             640..885
                     /locus_tag="VE844_16090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013556171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HZC02810.1"
                     /translation="MATIKMYTTSWCGDCRMAKMYLSEKGISYTEIDIEKTPAAAEIV
                     MKANDGKRKVPTLDIDGRFVAVSPFNQRQLEEALGLA"
     gene            1080..>1477
                     /locus_tag="VE844_16095"
     CDS             1080..>1477
                     /locus_tag="VE844_16095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018280688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /protein_id="HZC02811.1"
                     /translation="MRRWLAAIGLLMLMAAAVAEAGEIPATLRVSAIPDENPTELMRI
                     YTPFAEYLQREIGIPVRFTPVVDYAATVEGMAANKLDLVWFGGLTHVQARIRTGNTAY
                     AIAMREEDLKFKSVFVTNPQAKIQSLEELKG"
BASE COUNT          322 a          420 c          457 g          278 t
ORIGIN      
        1 cgacgagcca catagtgtgg cgtaccgcaa gtgagcagta agtcggctca cgccgactgc
       61 ccccaagcca ggggcagtcg ggccataagg cacgagcgtt tagcttgaca tcaccgccta
      121 gcattttgta aggtaggtga gcgttttatc gggcaggtcg ccacacgcta ttcagcgaga
      181 gaggattccc atggaaggtc acagattagt gcctttgcgg tacctttcgc gtcactgatc
      241 tggtgtgttc ccccggaggg agcgggcaca gggactgtgc ctgacgccgg tgagccggga
      301 aggaatgggc gtatcggaac agagagcggt gaggggtgct acgggttggc ccaggctggg
      361 tccaccctcg cgtcagctgc gtctagcgcc acgcgaacta tcctaaccct gtctgtcata
      421 ttttcctaac ctgccgtcct ttcacggatc cccgcatcac atccaacgat caaccgccac
      481 gggatggttt ttgtcccggc acctacctct gcctggagcg cagcgggtca ggggcacatg
      541 cgtggagata cgaccccagc ctcccacagc cggcgcaggg gcaaccttcg tcaacgcgct
      601 ctttcacggg tcgacattgc aacctaggag aagagactta tggccacgat caaaatgtac
      661 accacgagtt ggtgcggcga ttgtcgcatg gcgaagatgt acctctccga gaaaggcatc
      721 agctacacag aaatcgatat cgagaaaacg ccagcggccg cggaaatcgt catgaaagcc
      781 aacgatggca agcgaaaagt ccccacattg gacatcgacg gccgtttcgt cgccgtcagc
      841 ccattcaatc aacgccagct ggaagaggcg ctgggccttg cctgaccgta ggagtggttg
      901 gcgctccgcg atattaggct aagcaacggg ggaaatcgcc accgtaaggt ggcgttgaat
      961 cctcaagcgg ttttcgggca tctaaggaca tgacccccga ggtacgtagt cgtggcctca
     1021 atgtccagcg cggtagctac aggacacacc agtaaggctg tccggtcgag gagagcggaa
     1081 tgaggcggtg gttggcggcg atcgggttat tgatgcttat ggcggcggcc gtggctgagg
     1141 caggggaaat cccggcgacc ttgcgggtat cggccattcc cgatgaaaac cctactgagc
     1201 tgatgcggat ttacaccccc ttcgcggagt atctacagcg cgaaatcggc atcccggtgc
     1261 gattcacgcc ggtggtggat tatgccgcca ccgtggaggg gatggcggca aacaagctcg
     1321 acctcgtgtg gttcggcggc ctcacccacg tccaggcgcg catccgcacg ggcaacacgg
     1381 cttatgccat cgccatgcgg gaggaagacc tcaagtttaa gagcgtgttc gtcaccaatc
     1441 cacaagcgaa gattcagtcg ctcgaggagc tgaaagg
//
LOCUS       DASQSL010001582         1122 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_148314, whole genome shotgun sequence.
ACCESSION   DASQSL010001582 DASQSL010000000
VERSION     DASQSL010001582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148314"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..364)
                     /gene="nusB"
                     /locus_tag="VE844_16100"
     CDS             complement(<1..364)
                     /gene="nusB"
                     /locus_tag="VE844_16100"
                     /inference="COORDINATES: protein motif:HMM:TIGR01951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HZC02812.1"
                     /translation="MSQTPTTAYVRGRVRARRCALQALYQWQLSGKDPNQILGEFIAE
                     RELIKVDMDYFQCLTREIPAHIGILEQSLIGVLDRPIHELDPIEHAVLWIGVYELRFH
                     PEIPWRVVINEAVELTKIF"
     gene            complement(361..840)
                     /gene="ribE"
                     /locus_tag="VE844_16105"
     CDS             complement(361..840)
                     /gene="ribE"
                     /locus_tag="VE844_16105"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020558885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HZC02813.1"
                     /translation="MDKIKIIEGDLVLHEVTRFGILVSRFNDFIVNQLLSGCLNILQR
                     HGVNPEDIAVVKVPGAREMLLLAKHMGASGKFDAIIALGAIIRGETPHFDYVASACSL
                     GLAAISTEFDIPVAFGVLTVDTIEQAIERAGTKAGNKGAEAAMAAIEMVSLIRKLSA"
     gene            complement(940..>1122)
                     /locus_tag="VE844_16110"
     CDS             complement(940..>1122)
                     /locus_tag="VE844_16110"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011628128.1"
                     /note="bifunctional enzyme DHBP synthase/GTP
                     cyclohydrolase II-like protein; functions in riboflavin
                     synthesis; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP
                     cyclohydrolase II"
                     /protein_id="HZC02814.1"
                     /translation="NGGAKPLDQSARSKSQDLRTIGLGAQILADIGVRKMRVLSAPKR
                     IHSISGFDLEIVEYVT"
BASE COUNT          252 a          328 c          282 g          260 t
ORIGIN      
        1 cgaatatctt ggtgagttct accgcctcgt tgatcactac ccgccacggg atctccggat
       61 gaaacctaag ctcatagacc ccgatccaca gcactgcatg ctcgatcggg tccagctcat
      121 ggatcggccg gtcgaggaca ccgatgagcg attgttccag gataccgata tgggcaggga
      181 tctcgcgggt caagcactga aaatagtcca tatcgacctt gatgagttca cgctcggcta
      241 tgaattcacc gaggatttga ttcggatctt tccctgacag ctgccattga tagagtgctt
      301 gcagcgcaca gcgcctggcg cggacacggc ctctgacata ggcagttgta ggggtttggc
      361 tcatgcgctg agcttacgga tcagcgatac catctcgatc gccgccatcg ccgcctcggc
      421 gcctttgtta ccggccttgg tcccagcccg ctcgatcgct tgttcgatcg tatccacggt
      481 cagcacgcca aaggccaccg gtatatcaaa ttcagtcgat atggctgcaa gccccaatga
      541 acaggcgctg gcgacgtagt caaagtgcgg ggtttctccc ctgatgatcg ccccaagcgc
      601 aatgatggca tcaaatttac cgcttgcgcc catatgtttg gcgagcaaca gcatctcgcg
      661 ggcgcccggt accttgacca cggcgatgtc ctcgggattg acgccatggc gttgcagtat
      721 attgaggcag cccgagagca attggttcac gataaaatcg ttaaaacggc tgaccagaat
      781 tccgaatcga gtgacctcat gcaacactaa atcgccttcg atgatcttaa ttttatccat
      841 gataagtcct tatttagatg ttctaattct ccggctcaca ccgcccccca ctgtcctccc
      901 ccctcaggga tgaaagcagg gaacacgcct tcatcaaatt tacgttacgt attctacgat
      961 ctctaaatca aatcccgaga tcgaatggat ccgtttcggc gcactcagca cccgcatctt
     1021 gcggacgcca atatcggcca agatctgagc accgaggcca atggtgcgca ggtcctggct
     1081 tttggatcga gcagattgat cgagcggttt agccccaccg tt
//
LOCUS       DASQSL010001583         1107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_198745, whole genome shotgun sequence.
ACCESSION   DASQSL010001583 DASQSL010000000
VERSION     DASQSL010001583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198745"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(10..414)
                     /locus_tag="VE844_16115"
     CDS             complement(10..414)
                     /locus_tag="VE844_16115"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF015131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HZC02815.1"
                     /translation="MVFLSLGALIGAGMTVFAQAPPDTTIPRVPNPPLSSDLTNLPGD
                     LGAVAVLRPSNLNDFVKDPVMARALGKALFWDMQVGSDGVQACASCHFRAGADPRSKN
                     QVSPGLQHVSGPDLTYSVSPGPNHQLEALDFP"
     gene            complement(901..>1107)
                     /locus_tag="VE844_16120"
     CDS             complement(901..>1107)
                     /locus_tag="VE844_16120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02816.1"
                     /translation="GVKELRAFVKGLLKDEAAVRAGLSLLWSNGPTEGFIHRLKLIKR
                     QAYGRAGVDFLRHRILAPSAGMAA"
BASE COUNT          225 a          359 c          305 g          218 t
ORIGIN      
        1 cgagccgggt taggggaagt ccaaggcctc gagttggtgg ttcggaccgg ggctgaccga
       61 gtaggtgagg tccggcccgc tcacgtgctg caagcctggg ctcacctggt tcttcgagcg
      121 cggatcagcg cccgcgcgga agtggcagct cgcgcaggcc tgcacgccat cgctcccgac
      181 ctgcatgtcc cagaagagtg ccttgccgag ggcgcgcgcc atgacgggat ctttgacgaa
      241 gtcgttcaga ttcgacggac gcagcactgc caccgccccc aggtcacccg gtaggttggt
      301 cagatcgctg ctcagcggag ggttgggcac gcggggaatg gtggtatccg gcggcgcctg
      361 cgcgaaaacg gtcatcccgg ctccgatcag ggcccccaga ctcagaaaca ccacaccgac
      421 tctccacgtc ggtcgtagca cgggcgagcg acgtcgcatg acatgcctcc ctttaagagc
      481 gtgaatagta atttgtcaca gttgcgctca caacctgaaa acggtagggg aaaacacgag
      541 caccgcttgg atagacaagc gcaacgccat caagctcgca cggctgtgca cgcgctgtgt
      601 gcgaagcggc ctgactcttg atgatgtgga aatatttccc cataacgtcc ccgacaactg
      661 tacaaaaaag ctcaaccgaa tctcccctta agtccattta tatggaaatc tttcagcatt
      721 atagcccaaa tccgggtctt atacttcacg catgtcggca tcatgggcct gtcggcggtg
      781 cttcacccca gattcctccg ccacagcacc ctggcctgtc ccttgccttc ctcaatcatc
      841 ctctagtatg ccccccgcat ccaacacctt gccagctgcc atggctctcc tgactcagga
      901 ctacgctgcc atcccggcag atggcgcaag aatgcggtgg cgcaagaagt cgaccccggc
      961 tcgcccatag gcttgccgtt tgatcagttt cagccgatgg ataaaccctt ccgttggtcc
     1021 attgctccag aggagcgaca gcccggcgcg tacggctgct tcatccttga gcaatccctt
     1081 cacgaaggct cgtagctcct tcacacc
//
LOCUS       DASQSL010001584         1056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_148326, whole genome shotgun sequence.
ACCESSION   DASQSL010001584 DASQSL010000000
VERSION     DASQSL010001584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148326"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..445)
                     /locus_tag="VE844_16125"
     CDS             complement(<1..445)
                     /locus_tag="VE844_16125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02817.1"
                     /translation="MSNQTNVYLVDTQTLYKTDARELDLREPTNLVKPPAYMRLLQWM
                     RRELERIGNEEDYHYALHEIEELLLFDGGAGFGGPGIDFSTQFEKGWALAQDLQTLAP
                     IIDAPLRRRLTAEDFIDSADFPERLDTSSPLRLLDFPGWQFFERSE"
     gene            complement(797..>1056)
                     /locus_tag="VE844_16130"
     CDS             complement(797..>1056)
                     /locus_tag="VE844_16130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02818.1"
                     /translation="YMYSPKDIADLTDDDITDHMWPVSEILEPQTFAGLDVEAIVTPE
                     GTWHEPDDPGQLWDEPAWLNKARQVLKQHRECLALRHVLHI"
BASE COUNT          237 a          293 c          281 g          245 t
ORIGIN      
        1 cttcggacct ttcaaagaac tgccagccgg gaaagtcgag caggcgcagc ggcgagctcg
       61 tatccaatct ctcgggaaag tctgcgctgt ctatgaagtc ctcggccgtt aagcggcggc
      121 ggagcggagc gtcaatgatc ggagcgagcg tctgaaggtc ctgcgcaagt gcccaaccct
      181 tctcgaactg ggtggagaag tctattccgg gaccgccaaa ccctgcgccg ccatcgaaca
      241 gaagcagctc ttcgatctca tgcaaggcgt aatggtaatc ctcttcgttc ccgatacgct
      301 caagctcccg cctcatccat tgcagcaacc gcatgtaggc gggaggcttg acgaggttag
      361 tcggttctcg gagatcgagt tcgcgcgcat ccgtcttgta gagcgtctgt gtgtcgacta
      421 aatagacgtt cgtttggttt gacatccctt aaggcccttt ttatgggaag agtacagaag
      481 cgtatgccag ataccaagtg cctcctcgct cgctcaaagg gtttatttct cttgccaaat
      541 aacacccggt aggccccgac gcaatccgcc aaaactcctc tgcaagaatg tccctactcc
      601 tgcttgcccg gtatgcagta gctcgaccag atgaaacgga agatgtgggt aatcctccga
      661 gctgatagca ggtaggcaca gtgaacgaca agctgcgagc atcccatgtt ttgattgcgg
      721 agaagaataa tcacagagct tcaggaatca aaactggcac aagacgccat caggtggctc
      781 ttaaacttct cgggtttcaa atgtggagca catgccttaa ggccaggcac tcccgatgtt
      841 gtttgagcac ctggcgggcc ttatttagcc atgctggttc atcccacaac tgtcccggat
      901 catcgggttc atgccaagtc ccttccggcg tcacaatggc ttccacatcc aatcctgcga
      961 aggtctgcgg ttccagtatc tcgctgacag gccacatgtg gtcggtgatg tcgtcgtcag
     1021 tcagatcggc gatgtccttt ggactgtaca tgtaat
//
LOCUS       DASQSL010001585         1355 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_66311, whole genome shotgun sequence.
ACCESSION   DASQSL010001585 DASQSL010000000
VERSION     DASQSL010001585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1355
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66311"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..303)
                     /locus_tag="VE844_16135"
     CDS             complement(<1..303)
                     /locus_tag="VE844_16135"
                     /inference="COORDINATES: protein motif:HMM:NF044287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02819.1"
                     /translation="MSAEPAELIPTPDQLRLDAERPWPGLVAFREADAAFFHGRDSDI
                     GNLYRMVMGERLTVLFGMSGLGKTSLLQAGLFPKLRDENLLPIRIRLDYADQSLPLL"
     gene            complement(300..>1355)
                     /locus_tag="VE844_16140"
     CDS             complement(300..>1355)
                     /locus_tag="VE844_16140"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toll/interleukin-1 receptor domain-containing
                     protein"
                     /protein_id="HZC02820.1"
                     /translation="EIRPLKLFVSTTFDALLAQALNRVRYGGQDKTEILAFSPNSTQD
                     LPREVEELDRATVFHLFGRLSSVPDYAVTDEDLLEFMHALQSKTGRPERLFDAMVGSY
                     LLIIGCAFSDWLARFFVRIGKHERLSLARGKTDVLVDERTQQDDKLVHFLQHFSTRTK
                     VFPGGAVAFVNELHSRWTAAYPQGGGDREPITVKPPPPDDMERGAVFLSYASEDRPAV
                     ELIRDALEQAGIDVWFDRDELGGGDAWKSKILRNIASCCLFIPIMSSNTLTPKRREFR
                     TEWYYAREEHIKGRPDVRFIIPVTIDDTNAQSPGLVSWLREIQWVALPGGQATPEFVG
                     LVRTLFRDYQRSRVATA"
BASE COUNT          275 a          386 c          428 g          266 t
ORIGIN      
        1 caggaggggc agggactgat ccgcgtaatc gagccgaatg cggatgggta gcagattttc
       61 atcgcgcagt tttgggaaaa gacccgcctg gagcagcgag gtcttgccga gccctgacat
      121 gccgaacaac accgtcagcc gctcgcccat gaccatccga tagagattgc caatatccga
      181 atcgcgtccg tgaaagaacg ccgcatcggc ctcacggaag gccacgagcc caggccaggg
      241 gcgctcggcg tcgagtcgca gttggtcggg ggtgggtatt agttcggctg gctcagcgct
      301 catgcggtgg ccacccgcga tctttggtag tcccgaaaca gcgtccgtac gagccccaca
      361 aattcgggag tggcttgacc cccgggcagc gctacccatt ggatctcgcg gagccacgag
      421 actaggcccg gtgattgtgc gttggtgtca tcgatggtga ccgggatgat aaaacggaca
      481 tcaggacggc ctttgatgtg ctcttcgcgt gcgtagtacc attcggtcct aaactcgcgg
      541 cgtttgggtg tcagcgtgtt actcgacatg atcggtatga acaggcaaca cgacgcgatg
      601 ttgcggagga tcttgctctt ccaagcgtct ccgcctccaa gctcgtcacg atcgaaccac
      661 acgtcgatcc ctgcctgttc gagcgcgtcg cggatcaact cgacggcggg ccggtcctcg
      721 ctggcgtagc tcaggaagac ggcgccgcgt tccatgtcat caggcggagg cggtttgact
      781 gttatcggtt ccctgtcccc gcccccttgc gggtatgcag cggtccaacg gctgtggagc
      841 tcgttgacaa acgcgacagc gccaccgggg aagaccttgg tacgggtact gaaatgctgg
      901 aggaaatgga ctagcttatc gtcttgctgg gtgcgttcgt caaccaggac atcggtcttg
      961 ccgcgcgcca gcgataggcg ctcgtgcttg ccgatgcgca cgaagaaccg tgccagccaa
     1021 tcggaaaagg cacagccgat gataagcagg tagctcccga ccatcgcgtc gaatagacgt
     1081 tcgggacggc cggtcttgga ctgcagggca tgcatgaatt cgagtaggtc ttcatcggtg
     1141 accgcatagt cgggtaccga cgaaagacgc ccaaacaaat gaaacacagt ggcgcgatcc
     1201 agttcctcaa cctccctcgg gaggtcctgg gttgaatttg gcgagaaggc caggatctct
     1261 gtcttgtcct gcccaccgta gcgaacgcga ttcagggctt gggccagcaa cgcatcgaag
     1321 gtggtgctga cgaaaagctt gagggggcgt atttc
//
LOCUS       DASQSL010001586         1264 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_161245, whole genome shotgun sequence.
ACCESSION   DASQSL010001586 DASQSL010000000
VERSION     DASQSL010001586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1264
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161245"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(100..>1264)
                     /locus_tag="VE844_16145"
     CDS             complement(100..>1264)
                     /locus_tag="VE844_16145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009147432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMIN domain-containing protein"
                     /protein_id="HZC02821.1"
                     /translation="YDLAMEGNTVVITLGSEASSTSSGVMPAITGRAHAMRDGASIED
                     VDFRRGKDGEGRIIVALSDPSATANVRQEGGKILVDFVNVRAPERLDRRLDVIDFATP
                     VKEIDILPRGNSTQMVVSPLGEYEHLAYQSDNLFTLEVRPLTREEQEVRKKEQYTGER
                     LSLNFQNIEVRAVLQLLADFSGLNLVASDSVAGNVTLRLKNVPWDQALDIILKSRGLG
                     MRQVDNVMMVAPQEEITAREKLELESQTQLAELAPLRTEFVQINYAKAGDIAGLLKAE
                     ANNLLSARGNVSVDERTNTLLVQDTAEKLAEMRKVIGTLDIPVRQVLIESRIVIANQN
                     FSKELGVKFGYSKNTIDGVGDFGVAVGGKRPGDTRFPGNTAFHTDLRFGDLGT"
BASE COUNT          273 a          380 c          303 g          308 t
ORIGIN      
        1 aatacgccta tgcgtgtgcc cacaacttgg cggctacctc acccccttca gagtcgtaac
       61 taattgaaaa ccctcaagtt gctatcatta gtctgcctct catgtgccca aatctccgaa
      121 acgcaggtca gtgtgaaagg cagtattccc tggaaacctg gtgtcacctg gacgctttcc
      181 tcccacagca acaccgaaat ctcccacgcc atctatagtg tttttgctat acccaaattt
      241 gacaccaagc tccttggaga aattttgatt ggcgatcaca atgcgcgatt cgatcaacac
      301 ctgacgcacc gggatatcga gcgtaccgat caccttgcgc atctcagcga gcttttctgc
      361 ggtgtcctga accaggagcg tattagtgcg ctcatcgacc gagacattgc cccgcgctga
      421 gaggagatta ttggcctcag ccttgagaag cccagcgata tcgcctgcct tggcatagtt
      481 gatctggaca aattcggtgc gtaagggcgc aagctccgcc aattgggtct gcgattccaa
      541 ctcgagtttt tcacgggccg tgatctcctc ttgcggcgcc accatcatta cattgtccac
      601 ctggcgcatg cccaagcccc ttgatttcag gatgatatcc agtgcctggt cccaagggac
      661 atttttcaac cgcagggtca cgtttcctgc cacactgtcg ctcgcgacca gattgaggcc
      721 gctgaaatcg gcaagcagtt gcagtacggc ccggacctca atattttgga aattgagtga
      781 aagccgttcg ccggtatatt gttccttttt gcggacttcc tgttcctccc tcgtcaaggg
      841 gcggacttct agcgtgaaga ggttgtccga ctgataggcg aggtgctcat actcacccaa
      901 gggtgatacg accatctggg tgctgttgcc acgtggaagt atatcgatct ccttcaccgg
      961 ggtagcaaaa tcgatcacgt ctaaacgtct gtctagcctt tcaggcgctc ttacattgac
     1021 gaaatccacg aggatcttgc ccccttcttg gcgaacattg gcggttgccg aaggatccga
     1081 taaggctacg ataatacgcc cctccccatc cttaccgcgc cgaaaatcga cgtcttctat
     1141 actggcgcca tcccgcatag cgtgcgcccg cccggttatc gccggcatta ccccgctgct
     1201 ggtcgatgac gcctcgctgc ccaaggtgat aaccaccgtg ttcccctcca tagcgagatc
     1261 atag
//
LOCUS       DASQSL010001587         1102 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_198759, whole genome shotgun sequence.
ACCESSION   DASQSL010001587 DASQSL010000000
VERSION     DASQSL010001587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1102
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198759"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(183..857)
                     /locus_tag="VE844_16150"
     CDS             complement(183..857)
                     /locus_tag="VE844_16150"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013248464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000701 - purine-specific mismatch base
                     pair DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HZC02822.1"
                     /translation="MAKRKKPIDAKRRRTFQERLLTWYAANKRNLPWRNTSDPYNILV
                     SEIMLQQTQVERVIPKYEEFLQKYPTLEALANAPVEEVRQTWYPLGYNIRPERLHSIA
                     REAVEKYGGCIPDDPEVLQSLKGIGRYTAGAVLSFAFGREAPILDTNVRRVLHRVFIG
                     DGDARSYGLQKDLWDLSEALLPAGKVYDFNQALMDFGATVCTARKPVCLLCPLNDFCK
                     AFPYTP"
BASE COUNT          215 a          308 c          329 g          250 t
ORIGIN      
        1 ctcctcgtcc ccattatgtc tcaatgagta gccgcgagta gccgcgctca atcaagtctg
       61 gacgtcttgc aggttctctg tcgtaaaaag ataagccaag ggaggtcgtc agggtttcaa
      121 cggcttcagt ataacgaggg ctctgctact tgtccaccgg catactttcc cgagccatgg
      181 tcttacggcg tatagggaaa cgccttgcag aagtcgttca acggacagag gaggcagaca
      241 ggtttacgtg ccgtgcagac ggtggcgccg aaatccatca atgcctggtt aaaatcatac
      301 accttgccgg ccgggagcag cgcttcggag aggtcccaga ggtccttctg aaggccataa
      361 ctcctggcat ccccgtcgcc gatgaagacc cgatgcagga cgcgccggac gttcgtgtcc
      421 aggattggcg cctcacgccc gaaggcaaag ctgagcacgg cgcctgccgt atagcgaccg
      481 atgcctttca aactttgcag cacttcgggg tcatcgggaa tgcatccgcc gtatttctcg
      541 accgcttctc gggcgatgct atgcaggcgc tccggccgga tattatagcc cagcgggtac
      601 cacgtctgtc gtacctcctc gaccggggca ttggccagcg cttcaagggt cgggtacttt
      661 tgcaggaatt cttcgtactt gggaatgacg cgctcgacct gcgtttgctg cagcataatc
      721 tccgagacca ggatgttgta tgggtcggaa gtgttacgcc aggggaggtt tcgtttattc
      781 gcggcgtacc aggtgagcag gcgttcctga aacgtgcgtc ggcgtttggc atcgatgggt
      841 ttcttgcgtt tcgccatgtc ccggtccacc ctccgcgtgg cacaggttgt cagcgctgtg
      901 ttgcgccgtc atcttaggga atccgccgac aacttgcaag cgcttctccg gtgaagggtc
      961 tcctctgcac ggctatcttt ggcgtttaca agatgccccg agtggtgtag ggttatgcgc
     1021 tgtgagggca atgttcactg gacaaaagag cagtcgtgcc ggtagccaga catcgacctc
     1081 ggcagcgatc agggcagaca ca
//
LOCUS       DASQSL010001588         1613 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_171123, whole genome shotgun sequence.
ACCESSION   DASQSL010001588 DASQSL010000000
VERSION     DASQSL010001588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1613
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171123"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            439..630
                     /locus_tag="VE844_16155"
     CDS             439..630
                     /locus_tag="VE844_16155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02823.1"
                     /translation="MISVQVSSGTTRFRVAIQAESIEQALEIAARQNIGKECEVTFPI
                     DPESFFVENSVATLRQLAA"
     gene            701..1279
                     /locus_tag="VE844_16160"
     CDS             701..1279
                     /locus_tag="VE844_16160"
                     /inference="COORDINATES: protein motif:HMM:NF017778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine dioxygenase family protein"
                     /protein_id="HZC02824.1"
                     /translation="MNLGTMTLLALDTNNLQKLCELPTELALQQASPFLAHLVKDPTF
                     LEAEIRPLLEEARGTERDWYVAKRYEGEDHSYSLQIFVWPPSTETKIHDHSSWGVCCC
                     AVGSVLEERYERLDDGSRLDHAHLKKIWQLMWSREDGVSSVLPGDRGIHRIGNPGDSV
                     AISVHLYGPRLDEADGRDYDLSCDYVCERRED"
     gene            complement(1467..>1613)
                     /locus_tag="VE844_16165"
     CDS             complement(1467..>1613)
                     /locus_tag="VE844_16165"
                     /inference="COORDINATES: protein motif:HMM:NF021553.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2278 family protein"
                     /protein_id="HZC02825.1"
                     /translation="PAGSQWWAENGIWQDGATLIQRQDDTIVAFLNKFKTQSYETNQD
                     GHRV"
BASE COUNT          346 a          431 c          501 g          335 t
ORIGIN      
        1 cgcttacgct ggcccgcgag gaagcggcgt cgcttctacc gcatcctagt gggcccacgc
       61 aaactgggac aacgcggagg gtcgcgttcc gtgccgtgat cggaccatac ggtgagtcgg
      121 taatggacct cacgctctag acgcgccgaa gagattgctc cgcgcaggtg agggcgagtc
      181 gcgctcacca cggacatgcg gcatcaggcg gagcggatct ctatgcacga agcccagccg
      241 ttgtggccgg ccaccgcgcc cgagaacaac cgagggccgt acctcagctc caagacaccc
      301 ggctatatcc tctggctaca tcccaatgat tttcacgttc ttacattgtt tcactattat
      361 cagtgaagat cgtgaagtat aatcaatagg taacgatcat cgctatctca gacggaaaga
      421 aggtgtgggg agatgataat gatctcagtc caggtgagca gcggcacgac gcgtttcagg
      481 gtggcaatac aggctgagag catcgagcaa gccttggaga tcgcggcgag gcaaaacatt
      541 ggcaaagagt gcgaggtaac gtttcccatc gatcctgagt ccttcttcgt cgagaactcc
      601 gttgccacac ttaggcagct agcggcgtag agcgattgat gtgactagcg catcgttgtt
      661 tacgagttgg ctctcatggg gccataggga agcgagctcc atgaacctag gcacgatgac
      721 attactggcg ctggatacga acaatctgca gaagctctgc gagcttccta cggaactagc
      781 cctacagcaa gcctctccct tcctggcgca tcttgtgaag gaccccacct ttctcgaggc
      841 tgagattcgc cctctcttgg aagaggcgag aggcacagaa cgagactggt atgtggccaa
      901 aagatacgaa ggcgaggacc attcctactc tttgcagatc ttcgtgtggc ctccgagcac
      961 cgagacaaag atccatgacc attcctcctg gggagtttgc tgctgtgctg tgggatccgt
     1021 actcgaggag cgctacgagc gtttggatga cggctcccgg ctcgatcatg cccacctgaa
     1081 aaagatctgg caactcatgt ggagcaggga agacggagtc tcgagcgtcc tgcccggcga
     1141 cagaggcatt caccggatag ggaaccctgg cgacagcgtg gcgatctcgg tgcacctgta
     1201 cggacctcgg ctagatgagg cggacggccg ggactacgat ctctcgtgcg actacgtctg
     1261 tgagcggcgg gaagactaga cgggctgagt agccgtctcc tctccgtgcc ggccaacgcc
     1321 gattgcaaca atggcactac gcttcgggat tcagctcgat cctgaagaag tggtgaggct
     1381 acggctagtc ggttaggaga ggttgcgaac cccgcgagga ggtgggggct gagatggcag
     1441 gggtgttggc gggaacaagt tttgggctat acgcggtggc cgtcttggtt ggtctcgtag
     1501 gattgggtct tgaacttatt caggaaggcg acgatggtgt cgtcttggcg ttggatcaga
     1561 gttgcaccgt cttgccagat accgttctct gcccaccatt ggctgccggc tgg
//
LOCUS       DASQSL010001589         1347 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_161256, whole genome shotgun sequence.
ACCESSION   DASQSL010001589 DASQSL010000000
VERSION     DASQSL010001589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1347)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161256"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1186
                     /gene="ltrA"
                     /locus_tag="VE844_16170"
     CDS             <1..1186
                     /gene="ltrA"
                     /locus_tag="VE844_16170"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007181179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZC02826.1"
                     /translation="NGGSPGVDGRSIDETAAYLREHWPRIRDQVLHGTYQPQPVKRVT
                     IPKPGGGFRNLGIPTVLDRLIQQAILQVLQPQWDPTFSEYSFGFRPGRSAHQAVVQAQ
                     AYVAEGYGWTVEIDLEKFFDQVNQDMVMGRAAKRISDKRLLKLLRAFLKAGVMENGIV
                     SPTEAGTPQGSPLSPLLSNLILDELDQELTRRGLRFCRFADDCNIYVRSQRAGERVMR
                     SISRFLTKRLRLKINEAKSAVAPVGERSFLGFCIRGQRKRQRHIAPEALQRFKARVRL
                     LTRRTLGVNLSRMIGRLATYMRGWVAYFGFCQTPWVLHELDAWIRRRLRMVLWKQWRR
                     GPNRFAQLRKRGISRDHGAIAAGARSGYWRMSRHITVQQALPNAYFFTLGLPRLESAC
                     RA"
BASE COUNT          266 a          376 c          427 g          278 t
ORIGIN      
        1 caacgggggc agcccaggcg ttgatggccg aagtatcgac gaaacggctg cctacctgcg
       61 agagcattgg ccgaggattc gagaccaagt gctccacggc acgtaccagc cgcaaccggt
      121 gaagcgggtg accataccca aacccggagg cggtttcagg aacctgggca ttcccaccgt
      181 actggatcga ttgatccaac aggccatcct tcaggtgctc cagccgcaat gggaccccac
      241 gttttccgag tatagctttg gcttccgtcc gggacgttca gcccatcagg ctgtggtcca
      301 ggcccaagcg tatgtggccg agggctatgg ctggaccgtg gagattgatt tggagaaatt
      361 tttcgaccaa gtcaaccagg acatggtgat gggacgggcg gcgaagcgga ttagcgacaa
      421 gcgactgctc aaactcctgc gggcatttct caaggcagga gtgatggaaa acggtatcgt
      481 cagtcccacg gaggccggta caccgcaggg gagtccgctg tcaccgctgc tttcgaatct
      541 catcctggac gagttggatc aagaactgac acgtcggggg ctacgattct gccggttcgc
      601 ggatgattgc aacatttatg tgcgcagtca acgagccggt gagcgcgtga tgaggagtat
      661 cagccgtttt ctcaccaaac ggttgcgtct gaagatcaat gaggctaaga gcgcagtggc
      721 gccggtgggc gagcggagct ttcttggctt ctgtatccgg gggcaaagga agcgacaacg
      781 ccatatcgcg ccggaagcgc tccagcggtt caaagctcgg gtgcgactcc tgacgcgccg
      841 aaccctgggg gtgaacctgt cccgcatgat tggccgcttg gcgacttata tgcgaggctg
      901 ggttgcttac tttggctttt gccaaacgcc atgggtgttg catgaactcg atgcctggat
      961 tcgtcgtcga ttgcgaatgg tcttgtggaa acagtggcga aggggtccga accgctttgc
     1021 tcaactgcgc aagcggggga tttcacgcga ccatggcgcc atcgcggccg gagcccggtc
     1081 gggttattgg cggatgtcgc gccatattac ggtgcaacaa gccttgccga atgcctattt
     1141 cttcacgctc ggtctgcccc gattagaatc ggcatgtcgt gcttaactct gtcgaaccgc
     1201 catggtacgg acccgtatgc ctggtggtgt gggagggggg tgaccgtgag gggcctccct
     1261 atcccgatct cataggcatc gcctcctttc cctgcgcctt cgggcgccta acgccgccgg
     1321 tgagcagcgg cccacccatg acgagac
//
LOCUS       DASQSL010001590         1165 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_105800, whole genome shotgun sequence.
ACCESSION   DASQSL010001590 DASQSL010000000
VERSION     DASQSL010001590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1165
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105800"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            199..>1165
                     /locus_tag="VE844_16175"
     CDS             199..>1165
                     /locus_tag="VE844_16175"
                     /inference="COORDINATES: protein motif:HMM:NF017039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HZC02827.1"
                     /translation="MATDTPMMRQYRQLKQQYPDAILLFRMGDFYEMFGEDATLAAPI
                     LEIALTTRDKAQANPLPMCGVPYHAVDTYIDRLLRRGLKVAICEQLEDPRAAQGLVKR
                     DVVRVVTPGAVIHQTALIGKENNFLMGLCGTGERLGLALVDVSTGEFKLTELDGMPAN
                     ERVVDELQRLMPREVLVPASWGTEGPNLPGIDSPPWKITPREDWRFDADLAYQRLTQH
                     FGTTSLEGFGCEGAVQAITAAGVVLEYLQDTQRTALTHIQGLSRYYISDFMALDATTQ
                     RHLELLRTALDNGRTGTVLELLDQTVTPMGGRLLRRWLLEPLLHVE"
BASE COUNT          231 a          347 c          345 g          242 t
ORIGIN      
        1 caccgtctgc cgcgcctgga gacagcggta gagcagggga gtaggggggc tgcttcctcc
       61 gtcaagcctg ccgacacaac tggcgagcta ccgccccgat gagtctctga tggacactct
      121 tgccagagct ctcacctcgc catttcccct ccttctgacc cctttgactc cgagcgcatg
      181 agcaggggag cactctgcat ggccactgat acaccaatga tgcggcagta tcggcagttg
      241 aagcagcaat atcccgatgc catcctcctg ttccgcatgg gtgactttta tgaaatgttt
      301 ggtgaagatg ccaccctcgc ggctcccatt ctcgaaatcg ccctgacgac acgtgacaaa
      361 gcgcaggcca atccgctgcc gatgtgcggc gtcccatacc atgccgtgga tacatatatc
      421 gaccgcctgc tgaggcgcgg tttgaaggtg gccatttgcg aacaattgga ggatccgaga
      481 gcggcacaag gtctggtgaa gcgggatgtg gtgcgcgtgg tgaccccagg cgcggtcatc
      541 catcagacgg cgctgatcgg caaggaaaat aacttcctca tgggactatg tggcacgggt
      601 gagcgcttgg gtctggcgct cgtcgatgtc tcaaccggcg agttcaaact caccgagctt
      661 gacggtatgc ctgccaacga gcgagtggtc gatgagttgc aacgcttgat gccccgggag
      721 gtactcgtcc ccgcctcctg ggggaccgaa ggacctaatc tgcccgggat cgacagtccg
      781 ccttggaaga ttacgccccg tgaggattgg cgattcgacg ctgatttggc ctatcaacgt
      841 ctgacccagc actttggtac cacgtcgctg gagggctttg gctgtgaagg ggctgtccag
      901 gcgatcacgg cggcgggcgt tgttctcgaa tatctacaag acacacagcg cacggcgctg
      961 acgcatatcc aagggctatc ccgttattat atctccgact ttatggcact tgatgccact
     1021 acgcagcgcc accttgaact gctacggacc gctctcgaca atgggcgtac ggggacggtg
     1081 ctcgagcttt tggaccagac cgtcaccccg atgggaggac gcctcctccg gcgctggctc
     1141 ctagaaccac tcttgcatgt agagg
//
LOCUS       DASQSL010001591         1671 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_134732, whole genome shotgun sequence.
ACCESSION   DASQSL010001591 DASQSL010000000
VERSION     DASQSL010001591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1671
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134732"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            161..433
                     /locus_tag="VE844_16180"
     CDS             161..433
                     /locus_tag="VE844_16180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02828.1"
                     /translation="MYNRLFGKDYVPEPYIEEAYQYARNHKWYMEARLITLNDEYSFD
                     PNAKVSIEPFIDIIGRYFKQPKEGLGYDNSPVAHMWRSLIYPDHPL"
     gene            476..1327
                     /locus_tag="VE844_16185"
     CDS             476..1327
                     /locus_tag="VE844_16185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZC02829.1"
                     /translation="MNSDTVLGLNSKGFHRMHYYDWGDPENSRVVICVHGLTRNGRDF
                     DFLAQALSRDFRIVCPDVAGRGRSDWLESKQDYGYAQYMADMTALLARVTAGAEKTIY
                     WVGTSMGGLLGIIMAAMPKNPIRKLVVNDAGMLVPKAALERLALYVGKDPRFATLDAL
                     EAYVRHISAPFGALSDEQWRHLTVHSAKQHADGTWGFRYDPAIANAFSGELNDIDLSA
                     YWDAVRCPTLLLRGADSDTVLRATAEAMTQRGPKATLVEFQAVGHAPMLMSDEQVTAV
                     RDFLLQA"
     gene            1411..>1671
                     /locus_tag="VE844_16190"
     CDS             1411..>1671
                     /locus_tag="VE844_16190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02830.1"
                     /translation="MFVLAGVLGACMRSEWRKLLVSDGGFNVLTRGELHYLALQKHLC
                     HQGQSKGSRLHSSIYPPQHFLNFFPLPHGQCIGKINALFLSIR"
BASE COUNT          353 a          505 c          474 g          339 t
ORIGIN      
        1 gctgcacgat atcgcattcg atctcataag ggtcgatcac ggttggtagg gcgcgcagct
       61 tgtcgagccc tatgtgcctg agaaagtgag ctgggcgatt cgctaccatc aggcgctccg
      121 cttctacccg gatccctcgg tcgggtacga gtaccccgaa atgtataacc gcctctttgg
      181 caaagattac gtgcccgagc cgtatatcga ggaggcatac caatacgcgc gaaaccataa
      241 gtggtacatg gaagcgcgcc tgattacact aaacgacgag tacagcttcg accccaacgc
      301 caaggtgtca attgagccgt tcatcgacat catcggccgg tatttcaagc agccaaagga
      361 agggctcggc tacgacaaca gcccggtcgc gcacatgtgg cgcagcctca tctacccaga
      421 ccatccactc taaggcgatt tgtcatatct actttttgtc ggagcacgct agcgcatgaa
      481 cagcgacact gtccttggtc tgaactcgaa gggtttccat cggatgcatt attacgactg
      541 gggcgaccct gagaattcgc gcgtcgttat ctgcgtgcac gggctcacgc gcaacggtcg
      601 ggatttcgac ttcctcgcgc aggcgctgtc acgcgacttc cgcatcgtgt gtccggatgt
      661 cgccggccgc ggacgaagcg actggctcga gtcgaaacag gattacggct acgcgcaata
      721 catggccgac atgactgcac ttctggctcg tgtgaccgct ggtgcagaaa aaacgatcta
      781 ctgggtgggc acatcgatgg gcggcctgct cggcatcatc atggctgcga tgccgaaaaa
      841 cccgattcgt aagctcgtcg tcaacgacgc gggcatgctc gtgcccaaag cggcactgga
      901 gcggctggcg ctgtacgtgg gaaaggatcc ccgcttcgcg accctcgatg cgctcgaagc
      961 gtacgtgcgg cacatctcgg cgcctttcgg tgcgctgagc gacgagcaat ggcgccatct
     1021 caccgtgcac agtgccaaac agcatgccga cggcacgtgg ggatttcgct atgacccggc
     1081 catagccaac gctttcagcg gcgagcttaa cgatatcgat ctgtccgcgt actgggacgc
     1141 ggtgaggtgc cccactctgc tcctgcgcgg tgccgattcg gataccgtgc tgcgcgcaac
     1201 cgccgaagcg atgacgcagc gcggacccaa agcaaccctc gtggaatttc aggccgtcgg
     1261 gcacgcgccg atgctcatgt cggacgaaca ggtcaccgcc gtgcgggact tcctgcttca
     1321 ggcgtaagct aaaatcgcgg agttatcata acagcaggga ccacctcatc tcttggcgcg
     1381 acacgtcggc atcccaccgc tccgttcttt gtgttcgttc ttgccggcgt gctcggtgca
     1441 tgcatgcgct ccgaatggcg caagctcctg gtgagcgacg gcggtttcaa cgtcctgacg
     1501 cgaggtgagc tgcactacct ggccctgcaa aaacatttgt gtcaccaggg gcaaagtaag
     1561 ggcagccgac tacacagttc aatctaccca ccgcagcact tcttgaactt cttcccgctc
     1621 ccgcacgggc aatgtatagg aaaaataaac gccctttttt tatcgataag a
//
LOCUS       DASQSL010001592         1589 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_116707, whole genome shotgun sequence.
ACCESSION   DASQSL010001592 DASQSL010000000
VERSION     DASQSL010001592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1589
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116707"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            187..1374
                     /locus_tag="VE844_16195"
     CDS             187..1374
                     /locus_tag="VE844_16195"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02831.1"
                     /translation="MSLTCLPRRVSQCLRVLGPCFRPRHQVVFSWLLVLHLVYGERAN
                     LKALARHGPAHLAYQHYRRLLCAAYWCTKTLLWWFAEQALQALPPPEDGILYLVGDST
                     LKGKRGLKHPVAHKTRLSQYQPYVFGFRIVLLMAQWDVYRIPVDFALIRRKGAPDYQP
                     ENALFRQMLQEFRRPSWCHEVVVTADAAYASQANLATIQALDYGYVMALPRTWKFANG
                     KALKALVTHLPRWKYTQIRIPTVNTQRRRTFWVYAKRARLRHLGDVTVVLSKCRRNDG
                     PKQTKILVTNLPETVTAREIVGVYLRRWWIELLVKELKGVVGMGQHQVTKQADRVERS
                     VAVAIMAYLLLLKLRAKDIPADRPWSAFQWQRAFAWEVIAAQCERSAHQMARKWLQMR
                     KAA"
BASE COUNT          308 a          484 c          463 g          334 t
ORIGIN      
        1 actcaaacat gcagacctcc tcatacttga ggggccggat gaaccgttct gctttagcat
       61 tatcatactc aaaggtgaca ggtttgctca tgatctggcg tgaaaaccct tgccagtcca
      121 ggccatcgca gggatacttg atcccgaacg cccatcggat ctcgtattgc ccaggaggcc
      181 cggaccgtgt ccttgacttg tctgccccgc cgcgtctctc agtgcctacg ggtgctaggg
      241 ccctgtttcc gtcctaggca ccaggtggtg ttcagctggc tgttggtgtt gcatctcgtc
      301 tacggggagc gcgccaatct caaagccctg gcccggcatg gtccagccca cctggcctac
      361 cagcactacc ggcgcctgct gtgcgcggcg tattggtgca cgaagacctt gctgtggtgg
      421 ttcgccgagc aagccctgca ggcgttgccc ccacccgagg atggtatcct gtatctggtc
      481 ggcgacagca ccctgaaagg caagcgggga ctcaagcatc cggtggccca caaaacgcgc
      541 ctcagccagt accagccgta tgtcttcggc ttccggatcg tcctgctcat ggcccaatgg
      601 gacgtctatc gcatcccggt ggatttcgcc ttgatccgcc ggaaaggcgc tcccgactac
      661 cagcccgaaa acgcgttgtt tcgccagatg ctgcaggagt tccggcgccc gagttggtgc
      721 cacgaggttg tggtcaccgc cgatgcggcc tacgcctcgc aggccaatct ggccaccatt
      781 caggcgctgg actatgggta tgtcatggcc ctcccccgta cctggaagtt tgccaacggg
      841 aaggccctca aagctctcgt cacgcacctg ccgcgctgga agtacaccca gattcggatc
      901 cccacggtca acacgcaacg ccgccggacc ttttgggtct atgccaaacg ggcgcggctg
      961 cgccatctgg gagatgtcac ggtggtattg agcaaatgtc ggcgcaacga cgggccgaaa
     1021 cagaccaaaa tcctggtgac caatctgccc gagacggtaa ccgcgcggga aatcgtgggc
     1081 gtgtatctgc ggagatggtg gatcgagctg ctggtgaaag agttgaaagg cgtggtaggc
     1141 atgggccaac atcaagtcac caaacaagcc gaccgcgtgg agcgctcggt ggcggtggcg
     1201 atcatggcct atctgctcct gctcaagctg cgtgccaagg acatcccggc agaccgcccg
     1261 tggagcgcgt ttcagtggca acgggccttt gcgtgggagg tcatcgcggc acagtgcgag
     1321 cgttcggctc atcaaatggc tcggaagtgg cttcagatgc gcaaagcagc gtaaggtcat
     1381 tgagctacct gtcacctttg agttatacag gacgcagagg ctgcttgtcc cgaccatcga
     1441 tccttattcc tcgtgcactg gtccactatt acatcgatgt tatcaaggct ttgtgggccg
     1501 gcaagatcac ccggaaggtg ctccccttgt cgacttcgct ctcaacctcg atatgtccgt
     1561 cagcattctt gatgataccg tatataact
//
LOCUS       DASQSL010001593         1240 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_198775, whole genome shotgun sequence.
ACCESSION   DASQSL010001593 DASQSL010000000
VERSION     DASQSL010001593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1240
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198775"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..493
                     /locus_tag="VE844_16200"
     CDS             <1..493
                     /locus_tag="VE844_16200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02832.1"
                     /translation="VSTQPVAQRVVEQLNQPELSAGEVLANMSVEPDPGTMFINISYE
                     DSDPQRAQLIANTIAETSSQKISDVMLGANPIVARIWQPATLPENPVSPNPVRNGIIA
                     LLLGGLLGVGLAFLLEYVEDSWASPEEVEEVSGVPTFGVIPAFAISPGKRVEVSAITK
                     EGG"
     gene            497..1198
                     /locus_tag="VE844_16205"
     CDS             497..1198
                     /locus_tag="VE844_16205"
                     /EC_number="2.7.10.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004713 - protein tyrosine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0004715 - non-membrane spanning protein
                     tyrosine kinase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CpsD/CapB family tyrosine-protein kinase"
                     /protein_id="HZC02833.1"
                     /translation="MTRSRLQRQAQKDKSGALSEPLVTLQDPGRVASEAYRSLRTNLL
                     YAVADAPPTVILITSPASSDGKSITCANLAVVLAQAGKETLLVDGDLREPSLHKFFGV
                     PNVSGLVNVLSGEYGLSEACTEPCPGLKMLSTGPIPPYPTELLSSGRFAELIGQARRQ
                     FDYVLIDSPPMQLVSDPMIIAAKADAVLLVLDCQETSKRSLRKAVRDLEAVGANVLGT
                     VVNKAPMAETGRYGY"
BASE COUNT          278 a          338 c          362 g          262 t
ORIGIN      
        1 ggtgtctacc cagcccgtag cacaaagggt cgtcgagcag ctaaatcagc cggaactgag
       61 tgctggggaa gtgctcgcaa acatgagcgt ggagccagat cccggcacca tgttcatcaa
      121 tatatcctac gaggattccg acccgcagag ggcgcagctg atcgccaaca ccattgccga
      181 gacgagttcg cagaagattt cggacgtgat gctaggcgcg aaccccatag tcgccaggat
      241 atggcagcca gcgacgttac ccgaaaaccc agtaagcccc aacccggtgc gtaatggcat
      301 catcgcatta ttgctggggg gtcttcttgg tgtaggactg gccttcttgc tcgaatatgt
      361 agaggacagc tgggcctcgc cggaggaggt agaggaggtc tccggggtac caactttcgg
      421 tgttattcct gcgtttgcga tctctccagg caagagggta gaggtttcgg cgattacgaa
      481 agagggggga taatagttga ctcgttcccg gcttcaaagg caggcacaga aggataaatc
      541 tggcgctctc tccgaaccat tggtgacgct gcaagatccc ggtcgggtgg cctccgaggc
      601 ctaccgatct ctgcgcacca accttttgta cgcggtggcg gacgcgccac cgacggtgat
      661 cctaatcacc agtcctgcct cttcggatgg caagagcatc acctgtgcga acctagcagt
      721 ggttctggcg caagcaggta aagagaccct cttagtagac ggtgatctgc gcgaacccag
      781 cttgcataag ttcttcggag tgccaaacgt tagcggacta gtgaacgtac tgtctggcga
      841 atacggcctc tcggaggcgt gcacggaacc ttgcccaggc ctcaagatgc tctccacggg
      901 tcccatcccg ccctacccaa cggaactctt gagctccggt cgtttcgcag agttaattgg
      961 tcaggcgcgt cggcaattcg actacgtcct tatagattct ccgccaatgc agttggtctc
     1021 tgaccccatg atcatcgctg cgaaagcgga cgcagtcttg ctcgttctag actgccagga
     1081 aactagcaag agatcactgc gtaaggctgt gcgcgacctt gaagctgtcg gagcaaacgt
     1141 tctaggcacg gtagtgaaca aagctccaat ggctgaaacc ggccgttacg gttattaagt
     1201 cgtaggggct atctcaaagt tgagaggcgt ggcgtgcagt
//
LOCUS       DASQSL010001594         2340 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_91598, whole genome shotgun sequence.
ACCESSION   DASQSL010001594 DASQSL010000000
VERSION     DASQSL010001594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2340)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2340
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91598"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..200
                     /locus_tag="VE844_16210"
     CDS             <1..200
                     /locus_tag="VE844_16210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02834.1"
                     /translation="ARTCRELLKVEEALWLFVRVVGVEPTNNAAEVRFVDPKPNLKQV
                     WGMDPELRRGNDLWLKNLVLV"
     gene            695..>2340
                     /gene="ltrA"
                     /locus_tag="VE844_16215"
     CDS             695..>2340
                     /gene="ltrA"
                     /locus_tag="VE844_16215"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015146100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZC02835.1"
                     /translation="MSGPLATYEWGRLPWRKPEVAVFKLQKRIYKASQAGDVRRVHRL
                     QRLLLKSRAAKLLAVRRVTQDNRGKHTAGVDGIKSLTPKQRLAVAQHLDVLPTGKPAR
                     RIWTPKPGKDEQRPLSIPTLYDRARQALVKQGLEPEWEAKFEPNSYGFRPGRSVHDAI
                     GAIYTAINKQPKYVLDADIAKCFDRIDREALLRKTGTFPTPRRLIKRWLHAGVIDNGT
                     YIETDRGTQQGSVLSPLLANIALHGLETHLRSHFPWQRTGKEAGAQRSMNWKPQLIRY
                     ADDIVVLHRDKTAIESCQRLTADWLAGMGLELSPTKTRIIHTLHAEEGKAGLTFLGFD
                     IRQYPVSKYNTVQGGGYKTLIKPSKDAIKRHYRQLAETISRNKAARQENLIGLLNPII
                     AGWSNYYRAVVSKEIFQALDHKLYNRLAKWARFRHPRKSRHWITNRYWEVNRGKGWVF
                     AAHNGLALNQHASVPIVRHAKVRNSASPYDGNWSYWATRRGTHPGVPNRMAKLLKNQC
                     GRCTACGLVFMPDALVEIHHLDGNHNKNRYITLTAVHRHC"
BASE COUNT          615 a          627 c          676 g          422 t
ORIGIN      
        1 ccgcgcgaac ctgtcgcgag ttgctcaaag tcgaggaagc cctctggctg tttgtgcgcg
       61 tggtaggcgt cgagccgact aacaacgcgg cggaagtgcg attcgttgat ccgaaaccaa
      121 acctgaaaca ggtttggggg atggatcctg agctaaggag aggaaatgat ctatggctta
      181 agaacttggt tttggtgtag gtgtaattcc taccgccctt ggtgaggagc tgaagcacat
      241 tccccacggt agcgactggt cctcaatccg tgaagcggga atgaacgcgg ataagctggg
      301 agcctaacct ggtgacgccg ctagcacaga tgaatagggg tacggacaga aaggtaatga
      361 aactgtcgtt aagttgaacc agcggaatca ggcttagacg ctggagccaa aaggcacagg
      421 cgaacgggcc ggcctatttc tgcgtgaccg gcattcaccc ccgaagtaac ccggcagagt
      481 ttaccaccct acgttcatcg gcaaaccgag atcaggaacg aagtaaccct gtatgggctc
      541 tccgctgggg gtcgaacgcg cggagcaggt gccaacccca agccatacgg aatgggattg
      601 agtcagaagc caatgcctct ctgtaatgga gaggatacgc tgacggactc acggttgatg
      661 ggaaggtaga gctactgagt agagtataca ggtcatgagc gggccactgg ccacgtatga
      721 atggggccga ttgccttggc gtaagccgga ggtggcggtc ttcaagctcc aaaagcggat
      781 ctacaaagcc tctcaagcgg gagatgtccg acgggtccat cgactccagc gactgttact
      841 gaagtcacgg gcggccaaac tgttggccgt acgccgggtc acccaagaca accggggtaa
      901 gcacacggcg ggcgtggatg ggattaaatc actcacgccc aaacaacggt tagcggtggc
      961 gcaacacctg gatgtactac ccaccggcaa accagcaaga cggatctgga cacccaaacc
     1021 gggcaaagat gagcagcgcc ccctgtcaat cccaacgttg tatgatcgag cacggcaagc
     1081 gctggtgaaa caagggctgg aaccggaatg ggaagcgaag tttgagccca acagctacgg
     1141 ctttcggcca ggacggtcgg tccacgatgc gatcggtgcg atctatacgg caatcaacaa
     1201 acagcccaaa tatgtgttgg atgcggatat cgccaaatgc ttcgaccgca tcgaccggga
     1261 agccttattg cgtaagacgg gaacgtttcc gaccccgcga cggctgatca agcgttggct
     1321 gcacgctggg gtcatcgata atggaacgta cattgaaacg gatcggggta cacaacaagg
     1381 atcggtgtta tcaccgttat tagccaacat agcactgcat ggactggaaa cccatcttcg
     1441 cagccatttt ccgtggcagc gtaccggtaa ggaagcagga gcgcaacgct ccatgaattg
     1501 gaaaccccag ctcatccgct acgcggatga tatcgtggtg ctgcataggg acaaaacggc
     1561 tatcgagtcc tgccagcgac tgactgcaga ctggctagcg ggcatgggcc tggaactgag
     1621 cccgacgaaa acccgcatta tccacacgct tcacgccgag gagggcaaag cgggcctcac
     1681 gtttcttgga tttgatatcc gccaataccc ggtcagtaag tacaataccg tccaaggagg
     1741 cggctacaaa acgctcatca aaccgagtaa agacgcgatc aagcgtcact atcggcaact
     1801 tgccgagacg atcagccgca ataaggcggc acggcaagag aatctgattg ggctactcaa
     1861 cccgatcatc gccggctgga gcaactacta cagggccgta gtcagcaagg aaatctttca
     1921 ggcattggac cacaagctat acaaccggct ggcgaaatgg gcacggttcc gtcaccccag
     1981 gaaatcacgc cactggatta ccaaccgtta ctgggaggta aaccgaggca aaggctgggt
     2041 gtttgccgca cacaacggac tggcactcaa ccaacacgct agcgtgccga ttgtacgaca
     2101 cgccaaggtc agaaacagcg ctagcccgta tgacggcaac tggagttact gggcgacacg
     2161 ccgggggact cacccaggcg taccgaacag aatggcgaag ctacttaaaa atcaatgtgg
     2221 acgatgcaca gcctgtggac tcgtcttcat gccggatgca cttgttgaga tccatcatct
     2281 cgatggtaat cacaacaaga acaggtacat cactcttacg gcggtccacc gtcactgtca
//
LOCUS       DASQSL010001595         1534 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_171144, whole genome shotgun sequence.
ACCESSION   DASQSL010001595 DASQSL010000000
VERSION     DASQSL010001595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1534
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171144"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            49..387
                     /locus_tag="VE844_16220"
     CDS             49..387
                     /locus_tag="VE844_16220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018719579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02836.1"
                     /translation="MKPRLTEQQLQRENQIYRGTGGRSQENRGYRFRPAFLDTETGEI
                     YESYFKDGHPAPCHVLDGLPHNVVIAWTAAGRVAAVKSSVISGFVRGGCFYTREQAAQ
                     EITKITAVAA"
     gene            650..775
                     /locus_tag="VE844_16225"
     CDS             650..775
                     /locus_tag="VE844_16225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02837.1"
                     /translation="MNPLFHLTGKGETVDRIIGLEKIGADDYLAKLEGVGTCSNP"
     gene            760..>1534
                     /locus_tag="VE844_16230"
     CDS             760..>1534
                     /locus_tag="VE844_16230"
                     /inference="COORDINATES: protein motif:HMM:NF015094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/UbiB family protein"
                     /protein_id="HZC02838.1"
                     /translation="MFKSLRERSHLVGRLQQILRVLSHHGFYHIVKRLSLHGQLSPFD
                     RLRYARLHQQEDRDDAIHLRQACEELGPSFTQFGQLLSTRPDLVPEAFAAELSQLLTN
                     TRPEPWGIIQTVLPEEFFEAGSPFSTIDPKPLAAASIAQIHRATLKQDGAQVILKIQR
                     PGIEKLITSDLAVLRLLARLAEKYLAESRLLNPVQMVEEFAICIHQELDFILEATYMD
                     RFARIFANDPYIFSPRVYWEWTTPKVLVMEYLDGIPLDNI"
BASE COUNT          347 a          432 c          400 g          355 t
ORIGIN      
        1 agaggcgtat ttcaaagtag taaaattttc ctccgtctgg agacagaaat gaaaccgaga
       61 ttgactgaac agcaactaca gcgtgaaaac cagatctacc gtgggacagg cggcaggagc
      121 caggaaaacc gtggctatag atttcgtcca gctttcctgg ataccgagac gggtgagatt
      181 tatgaatcct attttaagga tggacatccg gccccctgcc atgtccttga tggattgcca
      241 cacaatgtgg tgatagcgtg gacagctgcc gggcgagtgg cggcggtgaa gagctcggtg
      301 atctcggggt ttgtgcgggg cggatgcttc tatacgcgcg aacaggccgc gcaagagatc
      361 acaaagatca cggctgtagc tgcttaatat gatcggttcg cacctctccc tccatctgtt
      421 cccggatacg attcagtaag ctgtaaacat cgaagggctt taccaaaaag cccgtcgcac
      481 cgagccttag agcttcctcc gcaacaccct ctatatctgc cctaccgctg atcaaaggcg
      541 gacagtttag ccttttggcg gactcaaagg tttcaatctc cgatccccca cttggactat
      601 aatgggtagc tgcaccggta aaagatgcca ttgtggtaat acttacacca tgaacccgtt
      661 attccatctg accggtaagg gtgagacggt cgatcgcatc atcggtctcg agaagatcgg
      721 ggcagacgat tacctggcca aactcgaggg cgtagggaca tgttcaaatc cttaagagaa
      781 cgttctcatc tcgtagggcg cctgcagcag atcctgcgtg tcctctccca tcatggtttt
      841 taccatattg tcaagcgcct ttccctgcac ggccagctct cgccgttcga tcgccttcgc
      901 tatgcccgtc tccatcaaca agaggataga gatgatgcga tccatctgcg acaagcgtgc
      961 gaggagctcg ggccttcctt tacccaattc ggccagctgt tgagcacccg gccggatctc
     1021 gtgcccgagg cctttgccgc ggagttgagc cagctcttga caaatacccg gccggagccc
     1081 tgggggatca tccagacggt cctacctgaa gagttcttcg aggcgggatc cccgttttcg
     1141 accatcgatc ccaagccgct cgccgcggcc agcatcgccc agatccaccg ggccacgctc
     1201 aagcaggatg gcgcccaggt gatcctcaag atccagcgtc ctggcatcga gaaactcatt
     1261 acctcggatc tggccgtgct ccgcctgctt gcccggctcg cggagaaata cctggcggaa
     1321 agccgcttgt taaatccggt ccagatggta gaagagtttg ctatttgtat ccatcaggaa
     1381 ttggatttca ttttagaagc cacctacatg gaccgtttcg ctcggatctt cgccaatgat
     1441 ccctatatct tttcacctcg ggtttactgg gaatggacca cccccaaggt cttggtcatg
     1501 gaatacctcg atggcattcc cttggataat atag
//
LOCUS       DASQSL010001596         2547 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_105823, whole genome shotgun sequence.
ACCESSION   DASQSL010001596 DASQSL010000000
VERSION     DASQSL010001596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2547
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105823"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            116..487
                     /locus_tag="VE844_16235"
     CDS             116..487
                     /locus_tag="VE844_16235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006889835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF393 domain-containing protein"
                     /protein_id="HZC02839.1"
                     /translation="MSEDKGKITVYYDGACPSCVRDRRHYEKLAGKSSEQVCWFDITG
                     REDQLRQIGIGPHKALTELHVSDETGRILCELDAYILLMDRVPLLKPLAWLLGMPIIR
                     PLLARLYHWIVIRRLRKSGRL"
     gene            686..1999
                     /locus_tag="VE844_16240"
     CDS             686..1999
                     /locus_tag="VE844_16240"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02840.1"
                     /translation="MCKPNNPSLRPTASPVYLAASAVNNLIRSLPAGTAYFIGVVLVT
                     LFTGQLLQCQGSLARAALPYVAHLRWGWHRVERAMARGSLALDALFDRATTWCLAHLP
                     VEPVRLGSERRTVHAIDSSTIARLRSRKASPLLGKGYWHRARRAVRANLVAALTSVVL
                     IRGVRVGLVRRTRFGKSCEQAVAALFRDLPESVDKRLFSVDAGIATIKQFTTATEHDA
                     LVGRLRKNVSLRRAPRARRPGQRGRPPVHGPVLHPGTRRPEGRAGEDFTTRVEERQVR
                     VRRWKNLHFARAPKTVIDVVRVDDPAYQRPLLIGTTATELTTEEIRQAYSHRWPVETN
                     FFVAQGTCAMEQPRAWTEAAVSRRISLALLAGSLLKALAAASEVLPMGPWDRKAVSSA
                     GRLANHLDQHTSNFEALALCGVAPRKYSKKDETKQTKDLQLPKAA"
     gene            complement(1982..>2547)
                     /locus_tag="VE844_16245"
     CDS             complement(1982..>2547)
                     /locus_tag="VE844_16245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007192156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02841.1"
                     /translation="QLKNSTTRVFEGAEQWQAHLRALNLTNKRHIRIATEGALLGALR
                     QGGLTETLAIISDDAGQFNVLTHGLCWVHAERLIHQLIPLNEPQREDQQAIRAQVWDF
                     YADLKNYKQAPSAEKKAELERRFDEIFTTKTRFETLNQVLKRLHRNKAELLLVLERPE
                     VPLHTNDSERDIRDYVNSSFTNSSGLG"
BASE COUNT          505 a          721 c          776 g          545 t
ORIGIN      
        1 acaataactc ctggaatata cccaaacggt ggtttgggca aaaatagcca gattgctgtt
       61 catgccgagc tcggcatgag catgaatctg ctcagtaccc gcaaatgcta aaccaatgag
      121 cgaagacaaa ggcaagatca ctgtgtatta cgacggcgcg tgcccgagtt gtgtccgaga
      181 ccgacgccac tatgaaaagt tggcaggcaa aagcagtgag caggtgtgct ggttcgatat
      241 caccggccgg gaggatcagc tacgccaaat cggcattggt ccccataagg ccctgactga
      301 actgcatgtg agcgacgaaa ccgggcggat cctgtgcgaa ctagatgcct atatcctgct
      361 gatggatagg gttcccctct tgaaaccttt ggcctggctg cttggcatgc cgattatccg
      421 ccccctgctg gcccgtctct atcattggat agttatccgt cgtcttcgga agagtgggcg
      481 gctttgagcg gtgctgaagg taagaggaga tatccacaga agctgtggat atctccctct
      541 tgacaatccg tggagaagcg aacggatcta cgagatagat agattggctg aaacttagcc
      601 aacctttgtg ttatctgtat ttcctttctc tcgagtttta ccaattgagt agccaaaagc
      661 agtcgagctc tgcgatgctt gttggatgtg caagcctaac aacccatcac ttcgcccgac
      721 tgcctcgcca gtttatctgg cggctagcgc tgttaacaac ctgatccgta gcttgcccgc
      781 tggtaccgct tacttcatcg gtgttgtact cgtcaccctg ttcaccggtc aactcctcca
      841 atgccaggga agccttgccc gcgccgcgct gccttatgtc gcgcacctgc gctggggctg
      901 gcatcgcgtt gaacgggcca tggcgcgcgg ctcgctcgca ctcgatgcgc tgtttgatcg
      961 tgctaccact tggtgcctgg cccacttgcc ggtcgaaccg gtccgcctgg gcagtgagcg
     1021 gcgcactgtg catgccatcg attcgtccac gatcgcgcgg ttgcgctcgc gcaaagcgag
     1081 tcccctgctc ggcaaaggct actggcatcg ggcacggcga gccgtacgcg ccaatcttgt
     1141 cgcggcgttg acgagcgtgg tgctgatccg cggcgtgcgc gtcggcttgg tccgccgcac
     1201 tcggttcgga aagagctgcg agcaagcggt cgccgccctc ttccgtgacc tgcccgaaag
     1261 cgtcgataaa cgcctgttca gtgtggatgc cggcattgcc actatcaagc agtttactac
     1321 ggcgaccgag cacgacgcgc tcgtcggccg gttgcgcaaa aacgtctctt tgcgccgtgc
     1381 gcccagagcg cgaagacctg gccaacgcgg ccggccaccg gtgcatgggc ccgtgctgca
     1441 tcctggcacc cggcggccgg aagggcgtgc cggcgaagac ttcacgaccc gggtcgagga
     1501 gcggcaggtg agagtgcggc ggtggaagaa tctgcatttt gcccgggccc ccaagacggt
     1561 gatcgatgtg gtgcgggtcg acgatcccgc ctaccagcgg ccattgctga ttgggaccac
     1621 cgccacggag ttgacaacgg aggagatcag gcaggcctat agccatcgct ggcccgtgga
     1681 gacgaacttt tttgtggcgc aggggacgtg cgcgatggag cagccgcgag cctggaccga
     1741 agcggcagtg agccggcgga tcagcttggc gttgcttgcc gggtcgctgc tcaaagcgct
     1801 ggcggcggca agtgaggtgc tgcccatggg gccatgggac cgcaaggcgg tcagttcggc
     1861 tgggcggctg gcgaatcatc tggaccagca tacgagcaat tttgaggcgc ttgcgctctg
     1921 tggcgtggcg ccgagaaagt acagcaaaaa ggacgaaact aagcaaacca aggacttgca
     1981 gctacccaag gccgcttgaa ttggtaaaac tcgagttgac ataatcgcgg atatcccgct
     2041 cgctatcatt ggtgtgtagc gggacctcgg gccgctctaa taccagcagg agttcggctt
     2101 tgtttcggtg cagccgtttg agcacttgat tgagcgtctc aaaacgggtc ttggtggtga
     2161 agatctcatc aaagcgccgc tcaagctccg cttttttctc cgccgaaggg gcttgtttgt
     2221 agttcttcag gtccgcatag aagtcccaga cctgggcgcg gatcgcctgc tggtcttccc
     2281 gctgcggctc attgaggggg ataagctggt gaatcagacg ttcggcatga acccagcata
     2341 acccgtgagt caggacatta aactgaccgg catcatcact gatgatggcg agtgtttcgg
     2401 ttaggcctcc ttggcgtagc gctcccaata aggcgccttc cgtggcaatg cggatatgac
     2461 gcttattagt gaggttaagg gcgcgtagat gcgcttgcca ctgctccgcc ccttcaaaga
     2521 cccgcgtcgt agaattcttc aactgct
//
LOCUS       DASQSL010001597         1507 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_66394, whole genome shotgun sequence.
ACCESSION   DASQSL010001597 DASQSL010000000
VERSION     DASQSL010001597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66394"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..474
                     /locus_tag="VE844_16250"
     CDS             <1..474
                     /locus_tag="VE844_16250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012585677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde ferredoxin oxidoreductase C-terminal
                     domain-containing protein"
                     /protein_id="HZC02842.1"
                     /translation="NRGACHLRGYTVASEILGIPHKTDPLVTEGKPALVKSFQDATAI
                     VDSSGLCVFTTFAWKLEDIQPQIAAACEGDWSLENLLKVGERIWNLERIFNLEAGITG
                     KDDTLPKRLLKEAAQTGPAKDKVNDLDKMLPEYYQLRGWTPEGVPTLEIRARLGL"
     gene            487..>1507
                     /locus_tag="VE844_16255"
     CDS             487..>1507
                     /locus_tag="VE844_16255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017842312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZC02843.1"
                     /translation="MHHVIIGAGPAGIIAGETLRKLDPHSAITVIGDESEPPYSRMAL
                     PYFLIDKINEMGTYLRKGADYYAVKRIDVKIDKVIRVDPAKKQVQFASGKEIPYDKLL
                     IATGSHPRVPPNLPGIDLPGIYPCWTLEDARHIASQAMPGAKVVLMGAGFIGCIILEA
                     LAKRGVKLTVLEREDGMVPRMMNSTAGALIKQWCNRKGVTVHTSIEVTAIEEAQNGRR
                     FNVVLGDGHVLPADLVITATGVGPNVQFLQGSGIRTEQGILIDRSMQTSYPDIYAVGD
                     VAQGIDFSTGQYSVQAIQPTAAEHGQIAARNMAGLKGALHRGSINMNVLDTLGLISSS
                     FGLWMG"
BASE COUNT          347 a          404 c          429 g          327 t
ORIGIN      
        1 aaccggggtg cctgccatct gcgcggatat acggtggcct cggagatcct cggcatccca
       61 cataagaccg atcccttagt cacggagggc aagcccgcct tggtcaagtc cttccaggat
      121 gccacggcga tcgttgattc ctcggggctt tgtgtattca ccacctttgc ctggaagctt
      181 gaagatatcc agccgcagat cgcggctgcc tgtgagggtg attggtcact ggaaaatctg
      241 ctcaaggtcg gcgagcggat ctggaatctc gaacgaatct tcaatctgga agcggggatc
      301 accggcaaag acgacacctt gccgaaacgt cttctgaaag aagccgctca aacagggccg
      361 gccaaagata aggtcaatga cctcgataag atgctgccgg agtattatca gctccggggc
      421 tggacaccgg agggggtgcc gacgctggag atccgggcaa gattaggtct ataatcaagc
      481 cagcttatgc accatgtcat catcggcgca ggaccggcgg gcatcatcgc cggagagacc
      541 ttgcgcaaac ttgaccccca ctctgctatc acagtgatcg gcgatgagag cgagccgccc
      601 tattcacgga tggctttgcc ctatttcctc atcgataaga tcaacgagat gggcacttat
      661 ctacgcaagg gtgctgacta ctatgctgtc aagcgcatcg atgtcaaaat cgacaaagtg
      721 atccgtgtcg atccggcgaa aaagcaggtg cagtttgcaa gcggcaagga gatcccctat
      781 gacaagctgc tcatcgccac gggttcccac ccccgagttc caccgaacct cccaggtatc
      841 gacttacctg gcatttatcc ctgttggacc cttgaggatg cccgtcatat tgcaagccag
      901 gcaatgcctg gcgctaaagt agtattgatg ggtgccgggt ttatcggctg cattattttg
      961 gaagctcttg ctaagcgcgg tgtaaaactt accgtcctgg aaagagagga cggtatggtc
     1021 ccgcggatga tgaatagcac ggcgggcgct cttatcaaac agtggtgcaa tcggaagggc
     1081 gtgacagtgc atacttctat tgaggtcacg gcgatcgaag aagctcaaaa tggccgtcga
     1141 tttaatgttg tgctcgggga tggccatgtc ctgcctgcgg atctcgtcat taccgccacc
     1201 ggtgtcggtc ccaacgttca atttctgcaa ggcagtggga tccggaccga gcaagggatc
     1261 ctgatcgatc gctcgatgca gacaagctat ccggacattt atgccgtagg cgatgtggct
     1321 cagggtatag atttttctac aggccaatac tcagtccagg cgatccagcc caccgccgcc
     1381 gaacacgggc agatcgcagc ccgcaatatg gcgggtctta aaggcgccct acatcgcggt
     1441 agcatcaaca tgaatgtact ggataccttg ggactgatct cgagctcatt tggcttgtgg
     1501 atggggg
//
LOCUS       DASQSL010001598         2923 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_66410, whole genome shotgun sequence.
ACCESSION   DASQSL010001598 DASQSL010000000
VERSION     DASQSL010001598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2923
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66410"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..551)
                     /gene="avtA"
                     /locus_tag="VE844_16260"
     CDS             complement(<1..551)
                     /gene="avtA"
                     /locus_tag="VE844_16260"
                     /EC_number="2.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020408244.1"
                     /note="transaminase C; catalyzes transamination of
                     alanine, valine, and 2-aminobutyrate with their respective
                     2-keto acids; also catalyzes terminal step in valine
                     biosynthesis; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--pyruvate transaminase"
                     /protein_id="HZC02844.1"
                     /translation="MKLSTFGQGFTRPSGILRLMEDLGTALAGRSDMLLLGGGNPSHI
                     PEVQACFRTRMQRILDNPGEFERMIGNYDPPKGEQDFIEALAVSLKREFGWEDLGTEN
                     IALIPGSQCGFFMLFNLFAGAFADGTHKQILLPMAPEYIGYADLGLTPNFFVAKRPTI
                     AILDPHTFKYHVDFAKLALGDDIG"
     gene            complement(616..1578)
                     /locus_tag="VE844_16265"
     CDS             complement(616..1578)
                     /locus_tag="VE844_16265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HZC02845.1"
                     /translation="MGAKQRLLVFIDAGGSAAQPEPALERGVFLAKEINAGLELFLIE
                     HAHIPEHLFGAPLGWGGLKPGDHLQQAMAWLEQLAEPLSKEGLAVCKDVVWHRHPYEA
                     VLEKVAATRPDIVIKTTRHDTLLHRTLFNYTDWHLIRNCPCPLLLAKSEDEWTTRRIV
                     ACVDPAYIHSQAETLDNVIIETAQRLAYRLRGELHIFHSIEPSPLLMAWIQEHGWSLK
                     SSEQRIHEQHEALLEELLRPYGISTRRVHIVTGLADKTLVQFVEAIEASLVVMGTVSK
                     GALGNLLIGNTAEKVLDGLKCDILVVKSNPIEVKAAVPAACVPP"
     gene            complement(1599..2276)
                     /locus_tag="VE844_16270"
     CDS             complement(1599..2276)
                     /locus_tag="VE844_16270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020483857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZC02846.1"
                     /translation="MIQLVDIARDFSVGHHLVHALKDINLTIEKSEYVSIMGPSGSGK
                     STLLNIIALLDRPTTGRYALDGRDVTALSDNELARKRRDHIGVVFQFFHLIPRLTAAE
                     NIELPMIVAGIDPKERLLRVRKALADFGLADRADHRPDQLSGGQHQRVAIARATIMRP
                     QVLLADEPTGNLDRTTGKEVVQLLEGLNEKGMILLLVTHDQELGGRASRQIRMIDGRI
                     AEDELGT"
     gene            complement(2273..>2923)
                     /locus_tag="VE844_16275"
     CDS             complement(2273..>2923)
                     /locus_tag="VE844_16275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020564103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HZC02847.1"
                     /translation="TLRRTIIRAPFAGVVAELNAELGEFITPSPTGIATLPPIDLLDL
                     SCRYVSAPIDEVDTAAIRTDMRAFVSLDAFPKQRWRGSVRRIAPYVLEREKQARTVEV
                     EVEIAADPLALQDLLPGYSADIEVVIEARDQVLRIPSEAVLEGSRVLVFDETAGRLEE
                     RVFDAGLSNWEYTEVRAGLVEDERIVVSLGQEGVKAGAYALAATENRARRQTLAPL"
BASE COUNT          616 a          869 c          828 g          610 t
ORIGIN      
        1 ccgatatcat cacctagagc cagctttgcg aaatcgacat gatacttgaa agtatggggg
       61 tctaagatcg cgatggtcgg gcgttttgcc acaaaaaagt ttggcgttaa acccagatcc
      121 gcatagccga tatactccgg ggccatgggc aatagtatct gcttatgggt cccatcggca
      181 aaggccccgg caaagaggtt aaagagcata aagaacccgc actgactgcc cgggatcagg
      241 gcaatgttct cagtaccaag gtcctcccag ccgaattcgc gcttgagcga gactgccaag
      301 gcttcgataa aatcctgttc gcccttggga ggatcgtaat ttccaatcat acgctcgaac
      361 tcgcctgggt tatccaagat ccgctgcatc cgggtacgaa aacaggcctg tacctcggga
      421 atatggctgg gattgcctcc tcccagcagc aacatatcgc tcctgcctgc aagcgccgtc
      481 ccaagatcct ccataagccg gaggataccc gaaggtcggg tgaacccctg gccaaaggtc
      541 gatagtttca tgggatgcct gttttcatct cctgctggaa agccctgttg agagcaaagt
      601 tgtctggacc aaggattaag gaggcacgca cgccgcaggg accgctgcct taacctctat
      661 cggattcgac ttgaccacca ggatatcgca cttcagtcca tccaacacct tttcggcggt
      721 attgccgatg agcaaatttc caagcgctcc cttggagacc gtccccatca ctaccagact
      781 ggcctcgatc gcttcgacaa actggaccag ggttttatcg gctagaccgg tgacgatatg
      841 gactctacgc gtgctgatcc cgtagggtct gagcagctct tcaaggagcg cttcatgctg
      901 ctcatggatg cgctgctcgg agctctttaa gctccaaccg tgctcttgga tccaggccat
      961 cagcaaaggc gaaggctcga tggaatgaaa gatatgcaat tcgccacgga gccggtaggc
     1021 caggcgctgc gccgtttcaa taatgacgtt atccaaggtc tccgcttggc tgtggatata
     1081 ggcagggtcc acacaggcca cgatccggcg cgtagtccat tcatcctcgc tctttgccaa
     1141 caacaatggg cagggacagt tacggatcaa atgccagtcg gtatagttga acagggtacg
     1201 atgcagcagg gtatcgtggc gcgtggtctt gatcacgata tccggccggg tggccgccac
     1261 tttttccagc accgcctcgt aaggatggcg atgccacacg acatccttac aaaccgccaa
     1321 tccctctttg ctgagcggct cggcaagctg ttccagccac gccatcgcct gttgcagatg
     1381 atcgccgggt ttcaggccac cccacccgag cggggcgcca aataaatgct cgggaatatg
     1441 agcatgttcg atgagaaata gttcgaggcc agcgttgatc tctttggcga gaaagacccc
     1501 gcgttcgagc gcgggttctg gttgcgcagc cgaaccccca gcgtcgataa ataccaataa
     1561 ccgttgtttc gcgcccattg aaagtgaagg gtgtctactt aagtcccaag ctcatcctcg
     1621 gcgatccggc cgtcgatcat tcggatctgg cgggatgccc ggccgccgag ttcctggtca
     1681 tgggtcacta ggagcaagat catacccttt tcgttcaagc cttcaagcag ttgtactacc
     1741 tccttgccgg tagtccggtc gagattgccg gtgggttcgt cggcgagcag cacttgaggc
     1801 cgcatgatgg tggcccgggc gatagctaca cgctggtgct ggcccccgga gagttggtct
     1861 ggccggtgat cggcccgatc ggccaggcca aaatctgcca gcgccttgcg gacccgcagg
     1921 agacgttcct tgggatcgat accggcgacg atcatcggca gttcgatgtt ctccgcggcg
     1981 gtcagtcgtg ggatcaggtg gaagaactgg aacacaaccc cgatgtggtc ccggcgtttt
     2041 ctggccaatt cgttgtcgga caacgctgtc acatctcggc catcgagcgc ataacgcccg
     2101 gttgtaggcc gatccaacag ggcgatgatg ttaagcaggg tggatttccc cgagcccgat
     2161 ggccccatga tcgaaacata ctcgcttttt tcgatggtta aattgatgtc ttttagggca
     2221 tggacgaggt gatggccgac actaaaatcg cgcgcgatgt ccacgagctg aatcatagcg
     2281 gggctagtgt ttgccggcgc gcgcggttct cggtcgcggc cagcgcatac gccccggcct
     2341 tgaccccttc ctgcccgagc gatacgacga tccgctcgtc ttctacaagc ccggcgcgga
     2401 cctccgtata ttcccagttg ctcaagcccg catcaaacac acgctcttca agccggccgg
     2461 cggtttcgtc aaacaccagc acccggctac cttcaagtac ggcttcgctc gggatcctga
     2521 gcacctgatc gcgggcctcg atcaccactt caatgtccgc gctatacccg ggcaggaggt
     2581 cttgcaaggc caaaggatca gctgcgatct ccacctccac ctccacggtg cgtgcttgct
     2641 tctcgcgctc gagcacatag ggcgcgatgc gccgcacgct accccgccaa cgctgtttag
     2701 ggaaggcgtc cagcgacaca aaggctcgca tatcggtgcg gatcgccgcc gtatccacct
     2761 cgtcgatcgg cgcgctcaca taacggcaac tcaggtccaa aaggtcgatg ggcgggaggg
     2821 tggcgatgcc ggtcggcgag ggggtgataa actcaccgag ctcggcgttg agctcggcca
     2881 cgacacccgc gaaaggcgcg cggataatcg tgcgcctgag cgt
//
LOCUS       DASQSL010001599         1211 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_66448, whole genome shotgun sequence.
ACCESSION   DASQSL010001599 DASQSL010000000
VERSION     DASQSL010001599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1211
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66448"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..444
                     /locus_tag="VE844_16280"
     CDS             <1..444
                     /locus_tag="VE844_16280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015906211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HZC02848.1"
                     /translation="VHFNVTEHPTAQWTAQQVIEAFPWDEAPRYLLRDRDRIYGTSFR
                     QRVQQMGIKEVLIAPWSPWQNPYVERLIGSIRRECLDHVIVLHERHLRRLLSGYFHYY
                     HHWRTHRALEMDCPMPRPVQRPEVGLIQAVPEVGGLHHPYERRAA"
     gene            706..>1211
                     /locus_tag="VE844_16285"
     CDS             706..>1211
                     /locus_tag="VE844_16285"
                     /inference="COORDINATES: protein motif:HMM:NF015131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HZC02849.1"
                     /translation="MCSGLLTPIGQGWTWAGTPADIGPLPPVPVPADNPLTPEKVELG
                     KRLFFDSRLSGDGSLACVSCHLPDQGWTTNTPLSPSYPTSMERRNSQTLINVAYNKAL
                     VWDGRAGALEKQALGPIQNPLHMNQNLDLLVERLKAMHVYEKGFRQVFGTSVTPEGIG
                     KALAAFERT"
BASE COUNT          255 a          339 c          389 g          228 t
ORIGIN      
        1 gtccacttca atgtgacgga acatcccacc gcgcagtgga ccgcccagca ggtcattgag
       61 gccttcccgt gggacgaggc cccgcggtat ctcctgcgcg atcgggaccg catctatggc
      121 acgtcctttc ggcagcgggt acagcagatg gggatcaaag aagtcctcat tgccccctgg
      181 agtccgtggc agaatccgta tgtcgagcgg ctgatcggga gtatccgccg cgaatgcctc
      241 gaccacgtga ttgtcctgca cgagcgacat ctcaggcgac tcctgagcgg gtactttcat
      301 tattaccatc attggcgtac gcacagggcg ctggagatgg attgtccgat gccgcggcca
      361 gtacaacggc cggaggttgg actgatccag gcagtaccag aggtaggtgg gttgcatcac
      421 ccctatgagc ggcgagcggc gtgatggcac aggcgtcacc taccggttta tggttgcgac
      481 aggtttgcgg gacacacagg ggagtgccgt caaccagtcc tacttgttgg gttcctaaca
      541 gatgatctga tccggggagg tcggagacga ggcatagccg tgacatgcgg ggggcggccg
      601 gaaatcaaag cgcatgggca agcacagcga aaaagatctg ctgctatcag atgagggtct
      661 gaagagatgg gaagagcgat acgggtcgta gcactctggt cggtgatgtg ttcaggcctc
      721 ctgacgccaa taggacaggg ctggacttgg gcaggaaccc ccgcggatat cggtccgctt
      781 cccccagtgc ccgtccctgc agacaacccc ctcacgccgg agaaggtcga attggggaag
      841 cggctctttt ttgattctcg tctctcaggg gatggaagcc ttgcgtgcgt gagttgtcat
      901 ctcccagacc aagggtggac caccaatacg ccactgtccc cgtcctatcc gacgagcatg
      961 gagcgccgga actcccagac gctcatcaat gtcgcctata acaaggcgct ggtttgggac
     1021 gggcgcgcgg gggcgcttga aaagcaggcc ctgggaccga tccagaatcc cctgcacatg
     1081 aaccagaacc tggatctgct cgtcgagagg ctgaaagcta tgcacgtgta cgagaaaggg
     1141 ttccggcagg tgttcggcac atcggtgacc ccagagggca taggcaaagc cttggcagcg
     1201 ttcgagcgga c
//
LOCUS       DASQSL010001600         1325 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_116736, whole genome shotgun sequence.
ACCESSION   DASQSL010001600 DASQSL010000000
VERSION     DASQSL010001600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1325
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116736"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(325..714)
                     /locus_tag="VE844_16290"
     CDS             complement(325..714)
                     /locus_tag="VE844_16290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005004699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02850.1"
                     /translation="MPQELAAAGIATLEAANRYLEEVYRPAFSAEFQQPATEEGSAFV
                     PWIGGSLDDILCEQYERTVGHDHCVRFEGITLQIPPDRHRCHYVKAKVRVHCYPDGSL
                     AVFHGPRKLANYDAEGRLTQDTIQAIA"
     gene            complement(870..>1325)
                     /locus_tag="VE844_16295"
     CDS             complement(870..>1325)
                     /locus_tag="VE844_16295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02851.1"
                     /translation="ERRLEQISHRRAPVDEVLAVTERYRERHAGWNVKHFYAWYRREG
                     ERRSYSWVKNTLQGAGLVTKAVKGGTHRTRRERAPWPGMMLHQDGSTHEWIAGQQWDL
                     IVTMDYATNEHYSMFFVPEEGTASSFQGVRGVIVSRGLFSSLYTGRGSH"
BASE COUNT          265 a          415 c          345 g          300 t
ORIGIN      
        1 cacaaccttc caagatattc ttgaaatcgt gtaccaatgt aatatttgga gaactgtaca
       61 ccgtcttcac gcgaccttct cctctatctc ctcaacacga aaacagttga tgtctgaaag
      121 gttagctccc tttcttctat atcggtagcc atattccaaa tttagaattg ctggggtctt
      181 gtgtgagcgg cttgccaaca gtgttgtcaa caaatagaac tatccggttt tgtaacacat
      241 gaattgtcca ctttttaaag tcgagggagg ggcagcgggt agagcccgta accgccttcc
      301 cccgaccgac cagtcgcggc ggacttacgc gatggcctgg atagtgtcct gtgtgagtct
      361 accctcagca tcataattgg ccagcttgcg tgggccgtga aagacggcca agctaccatc
      421 tggataacag tgtactcgca ccttcgcctt gacgtagtga cagcgatgcc ggtccggtgg
      481 gatctgcagc gtgatccctt cgaagcgcac acagtggtca tggcccacag tgcgttcata
      541 ctgctcacag aggatgtcat ccagggagcc cccgatccac ggcacaaagg cagagccttc
      601 ctccgtggcc ggctgctgga attcggcgct gaaggccggg cgatagactt cctcgagata
      661 gcgattggcc gcttccagtg tggcgatgcc ggctgctgcc agttcctggg gcaaacgccc
      721 ctgatgggtg gcaaaggccc gcttggctca cggcctttgg cttcggggga ataggccggg
      781 atcatctcga taccgaggtg tttcatcgcc cgcccaaact gagtgaggtt aaccttatcc
      841 accttgccgc cggcctctgg cgtgtgaagt caatggctgc cccggccggt gtagagtgag
      901 ctgaacagcc cccgactcac gatgaccccc cgtacgccct gaaagctcga cgctgtgcct
      961 tcctcaggga cgaaaaacat cgaataatgt tcattggtgg catagtccat cgtcacaatc
     1021 aaatcccact gctgccctgc tatccactcg tgagtactcc cgtcttgatg cagcatcatc
     1081 cccggccacg gagcccgttc ccggcgcgtg cggtgtgtac cccccttcac tgccttggtt
     1141 accagtcccg ccccctggag cgtgttcttg acccagctgt agctgcgtct ttcaccctcc
     1201 cgccgatacc aggcgtaaaa atgcttcacg ttccagcccg catgccgctc ccggtaccgc
     1261 tcagtcaccg ccagcacctc gtccaccggc gcccgccgat gggaaatctg ttcaagccgt
     1321 cgctc
//
LOCUS       DASQSL010001601         2786 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_79277, whole genome shotgun sequence.
ACCESSION   DASQSL010001601 DASQSL010000000
VERSION     DASQSL010001601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2786
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79277"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(103..1377)
                     /gene="ltrA"
                     /locus_tag="VE844_16300"
     CDS             complement(103..1377)
                     /gene="ltrA"
                     /locus_tag="VE844_16300"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: protein motif:HMM:TIGR04416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZC02852.1"
                     /translation="MKVERVMERVYDRRRLHQAWQTVRRHAGAAGIDQMTVEDFAQRQ
                     EAFLDLIEAKLQAGTYRFKPARRVEIPKPGSTQKRNLGIPVVMDRIVSTSLHSMLEEL
                     FDPDFTRSNFGFRRGKSQHQAIGHVRQAVVDGYEWCAAIDLQGFFDEIPHDLILKLIR
                     RKICDERVVTLIARALKAGVMVEGVLEKTAKGCPQGAPVSPMLSNIVLNELDHELQRR
                     GHRYCRWADDFIILLKTERAARRVMESVTTFLEQNLGLPVNRDKSHVALVKDVEFLGF
                     QILRGKIRISTQARKRFKDQVRRLRPRNNGQSMYQIIHDLNQYLRGWVGYYRLQEFLR
                     VFRELDEFIRSRLRSMQLKKWKKPRKFQRMMIRAGYPVDEARRTWIKMTKWQSVMRRP
                     VRFVLNLKWFRRQGLLFLDDFTSQTLKLEFDR"
     gene            complement(2560..2786)
                     /locus_tag="VE844_16305"
                     /pseudo
     CDS             complement(2560..2786)
                     /locus_tag="VE844_16305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973759.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
BASE COUNT          514 a          887 c          732 g          653 t
ORIGIN      
        1 ggtataccag caaacaaaat cgataaatcc cggtaggaag cagactagag cctgccccct
       61 ccggacagaa cggcacatac cggccggtaa accgctcttc gatcagcgat caaactccag
      121 tttaagagtc tgagacgtga agtcgtcgag aaagagtagg ccttggcggc gaaaccactt
      181 caagttgagc acaaagcgca ccggtcgtct catgaccgat tgccacttgg tcatcttgat
      241 ccaggttcgc ctcgcttcat cgaccgggta accagcccgg atcatcatgc gctggaactt
      301 cctcggcttc ttccacttct tgagttgcat ggagcgaagc cgactgcgga tgaattcatc
      361 caactctcgg aacaccctga ggaattcctg gagccgataa taccccaccc atccccgaag
      421 atactgattc aggtcgtgga tgatctggta catcgactgg ccattattgc gcggcctcag
      481 ccgtcgcacc tggtccttga agcgctttcg ggcctgggta ctgatccgaa tcttgcctct
      541 gagaatctgg aagcctagaa actcaacgtc cttgacgaga gccacgtggc ttttgtcccg
      601 attcaccggc aatcccaggt tctgttcgag gaaagtcgtt acgctctcca tcacccgccg
      661 agcggcccgc tccgttttca gcaggatgat aaaatcatcg gcccatcgac agtaccggtg
      721 cccacggcgt tgcagctcgt ggtccagttc gttgagcacg atgttcgaga gcatgggcga
      781 gacgggtgcc ccttggggac agcccttcgc ggtcttctcc aagacaccct cgaccatcac
      841 cccggccttt aacgcacggg caatcagcgt cacgactcgc tcatcgcata tcttgcgccg
      901 aatcagcttc aggatcaggt catgcggtat ctcgtcaaag aacccctgca ggtcaatggc
      961 cgcgcaccac tcgtagccgt ctaccacggc ctgccggaca tgtccgatgg cctggtgttg
     1021 gctcttgcct cggcgaaacc cgaaattcga cctcgtgaag tcggggtcga acagctcttc
     1081 cagcatactg tgcaggctgg tgctgacgat ccggtccatc accaccggaa tcccgagatt
     1141 gcgcttctgg gtggaacctg gtttcggaat ctctacccgc cttgcgggtt tgaaacgata
     1201 ggtgccggct tgcaacttcg cctcgatgag gtcgaggaac gcctcttgcc tctgcgcaaa
     1261 gtcttccacc gtcatctggt cgatgccggc tgcacccgca tggcgacgta cggtttgcca
     1321 tgcctgatgc agtcgcctcc ggtcatagac ccgctccatc actcgttcaa ctttcacctc
     1381 gtcagcctcc gtgaccctct tgcgttagaa atggtcggga agggtaggtc gcttggcccc
     1441 agccggaatg gcttatgacc tcggcgatgc ttcgccttgg tgtctgcttc gatctcgcca
     1501 tccccattcc gttttctggc tgttcattcc cttctctatg tcgactttcc aacgtcgtca
     1561 tcctcgcctc tcgtccacgg cttcccacac ccaggtggcg tggcctgggc gtccgagtct
     1621 tccccgtcgt ccgagtcatc ttgttgccgc accgatcaga agaatcaacg gggggtgacg
     1681 gtaggtggag agtttccgct ccgcgccctt tcggttgcgc ggcgggttcc tagttccacc
     1741 atggccctcc tagccatcgc atcttcctgt ctttgccgct tcaaggctct tacgacgttg
     1801 tgcctcggtc gtcagggttt taccctccac acggttaccc ggcttcacag gccctgagtc
     1861 ctcagtacta cccgtggatc tgccaccctc tgcccccttc ccgttccggg gtcaccgtta
     1921 ccgggtccgt tttctacggc ctcttacggc cgcagggcag gaggacttcc cggggtaaga
     1981 cacactccct ctccgtatcc cgtcccgctt cagtgcacgg cggctacgac agtcggatat
     2041 cggggctcgc tcagccacgc ctgctcgccc ccctccgcac acccatctag cgggttcgct
     2101 gttcgctacg tacacgggtt ctgcctcagg cttctttcag acacgccatt tctggatatg
     2161 cccttgcccc ttcttggcgt tccccttccg tccgatcacg gcgggtttca ggttgacctc
     2221 cttcctgttt gcagtaagtg tgtcatgccc ggcacacgta gatacccacg ggctgacgcc
     2281 cgtggcactt gcaaaggaag tttgcattta tcttgagggc tgcatgccct caaactccct
     2341 gtaaggatgg cattcaccca cgcctataaa ggcgtggtcc tctgccatat tctgataggt
     2401 ggccacgcgt ttagctcggt tgttttcaac tgtctgttgg gattttcccg agctcaccgg
     2461 tgatgccacc ggaacagcaa ccgagccgtc atcaagtgtc aggggtgcgc taggctttgc
     2521 tttattgagc gcttcgatct catgagcgtg agtgttaaag acctcttgta aggctgcggc
     2581 tacattctgg aagagatgaa accggttggc aacttgaatg gcatcgggcg cgccctctcg
     2641 aataccagca gcataggctt cagctcggtc gcgggcgacc acctgcacgg caggatgggc
     2701 ttggaaccac gcggcaacgg tttcagaagc ccggtcctca agtaaatcaa tgggacagcc
     2761 ccgttcgaga tcaaccacga tggtgc
//
LOCUS       DASQSL010001602         1197 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_134863, whole genome shotgun sequence.
ACCESSION   DASQSL010001602 DASQSL010000000
VERSION     DASQSL010001602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1197
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134863"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..809)
                     /locus_tag="VE844_16310"
     CDS             complement(<1..809)
                     /locus_tag="VE844_16310"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC02853.1"
                     /translation="MLGLLGAGGKRRPTPAVIDPVPGGRIVLSERQGRWLEALVRGSS
                     APQRLVKRAQMILLLAAGKTFNQVARALGVLRQTVYKWGKRWRTQARRLAEVEAQACP
                     DHVLSRVLEGLLMDAYRTGKPATFSPEQIVKLIAVACEPPQHSGRPIRRWSSRELAAE
                     MVKRGIVKTIARSTLSQLLKEAKIKPHLSRYWLNAQPEDEAVFDAQVRAICALYRQAT
                     QLHKLGIHLVSTDEKTGIQALQHKYPAKPVRVGQVARIEHEYDRHGTLCLIA"
BASE COUNT          255 a          364 c          336 g          242 t
ORIGIN      
        1 gcgatcaggc acagcgtgcc atggcggtca tattcatgct caatgcgggc cacctgaccc
       61 accctcaccg gcttggcggg gtatttgtgt tgcaaggctt gaatacccgt tttctcatcg
      121 gtagacacga gatgaatccc aagcttatgg agttgagtgg cctggcgata gagcgcacaa
      181 atagcgcgca cctgggcatc aaagacggcc tcgtcctccg gctgagcatt aagccagtag
      241 cgactcagat gcggtttgat cttcgcttcc tttaacaact gactgagggt gctgcgcgcg
      301 atggtcttca caatcccccg tttgaccatc tcagcagcca actcccgcga actccagcgc
      361 ctgatcggcc ggcccgagtg ctgcgggggt tcacaggcta cggcaatcag cttgacgatc
      421 tgctcggggc tgaaggtggc gggtttgcca gtccgatagg cgtccatcag tagcccttcc
      481 aacaccctgc tcagcacgtg atcggggcac gcctgcgcct ccacttcggc caaccgccgc
      541 gcttgtgtcc gccagcgctt accccacttg tagacggtct gacgcagcac ccccaaggcc
      601 cgcgccactt gattaaacgt cttgccggca gcgagcagta aaatcatctg ggcgcgtttg
      661 accaatcgct gcggcgcact cgagcctctc accaacgctt ccaaccagcg cccttgccgc
      721 tcactcaaca cgatcctccc cccgggcacc gggtcaatca ccgcgggcgt gggcctgcgc
      781 ttgccccccg cgcccagcag ccccagcact tgccggctgc cgccgatcca gtgattcagt
      841 agtgctggct gacctcaata aaaaagtata aaagggattg atcataaagg ttaggttcct
      901 tgggccaaat gatgactact ccagcgggcg tggcactgag ctaccccagg gtgttcgttt
      961 gtgcaaccag caacagtgta tacgaatttc tcggcagggg cactagtggg acgggatatt
     1021 gaaagcttga ttgggagaat tggtaatgag gaattagccc aagttgtcag cgctttattc
     1081 gtagctggga attatgaaca ggcccgccag acggcggaag gaataggtga tcctgaggac
     1141 aaaacccgag ccttgaagga catcgcccga gcctacgcga gattaggaca atggcgc
//
LOCUS       DASQSL010001603         1011 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_66514, whole genome shotgun sequence.
ACCESSION   DASQSL010001603 DASQSL010000000
VERSION     DASQSL010001603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66514"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..522)
                     /locus_tag="VE844_16315"
     CDS             complement(<1..522)
                     /locus_tag="VE844_16315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015186399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HZC02854.1"
                     /translation="MYKTKAYSADSAESPLASTTIPRRDPTERDVQIEILFCGICHSD
                     LHQVRNEWSNVMPTVYPIVPGHEIVGRVTKVGSAVTKYKPGDLAAVGCMVDSDGTCPH
                     CRDGLEQFCPNMTLTYNSPDKHLGGVTYGGYSDSIVVDERFVLRVPSKLDLAGAAPLL
                     CAGITTYSPMRHWG"
     gene            633..737
                     /locus_tag="VE844_16320"
                     /pseudo
     CDS             633..737
                     /locus_tag="VE844_16320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007462606.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
BASE COUNT          218 a          260 c          301 g          232 t
ORIGIN      
        1 gccccagtgg cgcatgggcg agtacgttgt gatcccagcg cagaggagcg gtgcggctcc
       61 ggcgagatcg agcttggacg ggacgcgcag gacaaagcgt tcatcgacga cgatgctgtc
      121 ggagtagcca ccgtaggtca cgcctccgag gtgcttatcc ggcgagttgt aggtgagagt
      181 catgttcggg cagaactgct caaggccatc cctgcaatgc gggcaggtgc cgtccgaatc
      241 gaccatgcag ccgaccgcgg caaggtcgcc cggcttgtac ttggtcacgg ccgagccgac
      301 cttggtgacc cgcccgacga tctcatggcc gggaacaatt gggtagacag tgggcatgac
      361 gttgctccac tcgttacgca cttggtggag gtccgagtgg cagataccgc agaacagaat
      421 ttcgatctgt acgtcgcgtt cggttggatc gcgtcgcggg atagtcgtag atgccagcgg
      481 cgattccgca ctgtcagcgg agtaggcttt cgttttgtac attgattggt gctcctattg
      541 gttttccgtt gtagattggt caggcgttgt tgcataaatg ctcatccatc cccagttatt
      601 gagtaggcca atagctaaag agtgacgagt tgatgaggaa gaaagcgacc taccggatcc
      661 gcaactggaa caagtataac aaggcgctga taaagcgggg tagtttgacg ttttggtttg
      721 acgaggaggc aatcgccgcc tgttcaagtg atgctattag ttcatcagta gaattataca
      781 gctctatttc aaaaaccgag ttgaactgtc ggaaatgatc gaagatacca ggcttgtaat
      841 tggttgggta aggaggtggt attgctatca ccccctcccc gcagaaaatc gggcaagctc
      901 ctgccacatc tcccagcatt tcgaccgccg cagctgcttg acctggccgt tagcgtcctg
      961 atgggacttt agcagctccc cccatcactc gacgatgcat ctcatgtcct c
//
LOCUS       DASQSL010001604         3656 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_198828, whole genome shotgun sequence.
ACCESSION   DASQSL010001604 DASQSL010000000
VERSION     DASQSL010001604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3656
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198828"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1353
                     /locus_tag="VE844_16325"
     CDS             <1..1353
                     /locus_tag="VE844_16325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012639747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HZC02855.1"
                     /translation="DTLRLIEAVAQRIETTGVEAWFELDAGELLGVDAVDYDKVTDTL
                     DVWFDSGVTHTCVLQTDPMLKFPADLYLEGSDQHRGWFQSALLTAVAMQGVAPYRAVL
                     THGFTVDAEGMKMSKSKGNVVVPQKVVDSLGADVLRLWVAATDYRAEMAVSQEILKRM
                     AEAYRRIRNTARFLLANLDGFDPARHQVPSEEMLKLDRWALDHAASLQDAILDAYDTF
                     QFHQIYQRIHCFCSVEMGSFYLDIIKDRQYTTPAESLPRRSAQTALYHIIEAMVRWIA
                     PILSFTAEEIWRYLPGSRGASVFLERWYEGLVRIDASDPFGPALWDRVLAVREAVSKE
                     LERLRVGGDIGSSLDAEVVLYCEGELREALAAFEDELRFVLITSYARVVPLQEAPAHA
                     VNSETPPGLKLVCTPSRYAKCTRCWHHREDVGSSAEHPALCGRCVMNIVGTGEIRRYA
                     "
     gene            1350..1862
                     /gene="lspA"
                     /locus_tag="VE844_16330"
     CDS             1350..1862
                     /gene="lspA"
                     /locus_tag="VE844_16330"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008928918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HZC02856.1"
                     /translation="MKPAADSSLAAANALRWVWLSAVVIVLDQLTKHWAVSQLQLHDP
                     VAVMPLVNLTLVYNTGAAFSLLNEAGGWQRWLFALLAMIISVLLIVWLYRLAEDRRWL
                     ACALSLILGGALGNLWDRLSLGYVVDFIDVYYGRWHWPAFNVADSAISVGAVMVLLGA
                     LIAGSREDRV"
     gene            1926..2882
                     /gene="ispH"
                     /locus_tag="VE844_16335"
                     /gene_synonym="lytB"
                     /pseudo
     CDS             1926..2882
                     /gene="ispH"
                     /locus_tag="VE844_16335"
                     /gene_synonym="lytB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007996419.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate reductase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA];
                     GO_process: GO:0050992 - dimethylallyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
     gene            2920..>3656
                     /locus_tag="VE844_16340"
     CDS             2920..>3656
                     /locus_tag="VE844_16340"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZC02857.1"
                     /translation="MIPDCIIVGGGIVGLLTARELAQAGQRVIILERGEKIGGEASWA
                     GGGVLASLYPWQTPQPVQALIRWSRAYYPHLAQELANTTTVDPEWTQSGLLSLDTEYR
                     REALNWASQTGEIIEYVEAERLKALEPRVGIAHRGALWLPELAQIRNPRLLKALSIAL
                     ENSGVSVFKHTEVQVITSSRGDRIEGLRTTRGTFVAGSVIVAAGAWSGTLLEGFSYKP
                     EIIPVRGQMIVYRTPPGFVQHLLLKQD"
BASE COUNT          722 a          943 c         1152 g          839 t
ORIGIN      
        1 gataccctgc gcttgatcga ggctgtggcc cagcggatcg agaccaccgg ggttgaggca
       61 tggtttgagc tcgatgcggg ggaattgctc ggggtggacg ccgttgacta tgacaaggtt
      121 accgataccc tcgatgtttg gtttgattca ggtgtcaccc acacctgcgt tttgcagacc
      181 gatcccatgc ttaagttccc ggcggatctt tatcttgagg gctcggatca gcatcgcggc
      241 tggtttcagt ctgcgctttt gaccgcggtt gcgatgcagg gggtggcgcc ttaccgggcc
      301 gtattgaccc atggcttcac cgtcgatgcc gaaggtatga agatgtccaa atccaaaggt
      361 aatgtggtgg tgccccaaaa agtagtggac tctttgggcg cagatgtctt aaggttatgg
      421 gtcgcggcta ccgactatcg ggcggagatg gcggtctctc aagagatcct caaacgcatg
      481 gccgaggcct atcgccgcat ccgcaatacc gcccggtttt tgctggcgaa tctggatggc
      541 tttgatcctg cacgccatca ggtgccgagc gaggagatgc taaagctcga tcgctgggcc
      601 ctggatcatg ccgcctccct gcaggatgcg atcctcgacg cctatgacac gtttcaattc
      661 catcagatct atcaaaggat ccactgcttc tgctcggtgg agatgggcag cttttatctt
      721 gatattatta aggatcgtca atatacaacc ccagctgaaa gcctgccccg gcgatcggcg
      781 cagaccgccc tataccatat catcgaggcg atggtacggt ggatcgcgcc gatcctgagt
      841 tttactgccg aggagatctg gcggtatctc cccggatcgc ggggagcgtc cgtgttcctc
      901 gaacgttggt atgaagggct ggttcgtatc gatgcctccg atccatttgg tcctgcactg
      961 tgggatagag tcttagcggt gcgggaggct gtcagtaaag aattggaaag gttgcgtgtc
     1021 ggaggcgata tcggctcgtc cttggatgcc gaggtggtgc tttattgcga gggcgaatta
     1081 cgcgaggcat tggccgcctt tgaagatgag ctccgctttg tgctgatcac gagctacgcc
     1141 cgagtcgttc ctctgcaaga ggcgccggcg cacgcagtga acagcgagac ccccccgggg
     1201 ctcaagctgg tttgtacgcc atcgcgttat gccaaatgca cgcgttgctg gcatcatcgt
     1261 gaggatgtgg gcagctctgc tgaacaccct gcgttgtgcg ggcgctgtgt tatgaacatc
     1321 gttggcacgg gcgagatccg gcgttacgca tgaaaccagc agccgatagc tctctggcag
     1381 ccgccaacgc attgaggtgg gtttggttgt ctgcagtggt gatagtgttg gaccaactga
     1441 ccaagcactg ggcggtaagc cagcttcaac ttcatgatcc ggttgccgtc atgcccttgg
     1501 taaatctcac cttagtttac aacaccggcg ctgcgtttag cctgctcaac gaggccggcg
     1561 gttggcaacg gtggctgttt gctctgctcg ccatgatcat cagtgtcctc ctcatcgtgt
     1621 ggctgtaccg attagcggag gatcggcgct ggttggcttg cgccctgtct ctgatcctgg
     1681 gcggtgcgct cgggaatctg tgggatcgcc tgagcctcgg ttatgtggtt gactttatcg
     1741 atgtgtatta tgggcgatgg cactggccgg ctttcaacgt ggccgattcg gcgatcagcg
     1801 tcggtgcggt gatggtgttg ttgggtgctt tgatagcagg gtctcgcgaa gatcgggtgt
     1861 agtgggtgtc cagtgagtgg agttctcgcg tttcgaacgg ctaatttttt aataggagac
     1921 agtctatgca aatcatactc gccaatcccc gcgggttttg tgctggggtt gaccgtgcca
     1981 tcggtattgt cgagcgggcg ctcgagttgt ttagtgcacc cgtttatgta cggcatgagg
     2041 tagtgcataa caaatatgtg gtcgatgatc tgcgcgccaa aggcgcggta ttcgtcgatg
     2101 agctcgacga ggtgccggat gaggccgtgg tgatcttcag cgcccacggc gtatccaaag
     2161 cggtgcgcga ggaggcctca aggcgagatc tgcggatctt cgatgccatc tgtcccctgg
     2221 tgaccaaggt gcatatggag gtggagcgct atcagcgaga ggggcgtgaa tgcatcctga
     2281 tcggccatgc tggtcatccc gaggtcgagg ggacgctcgg tcaatatcgg cgttccgatg
     2341 gggttggggg gatacatctg gtcgaatctg ttaaagacgt cgagacactt gcagtcaaag
     2401 atccgggctt cctcgccttt gtgacccaaa ccaccctatc gatggacgat acggcccaag
     2461 tgatcgatgc gctgcgggaa cgttttccga acataaaagg ccctaaaaaa gaagatatct
     2521 gttacgccac ccagaatcgc caggatgcgg tcaaaaaact ggccaagaac tgccaggtga
     2581 tcctggtggt cggctcgcgc aatagctcca attcgacccg ccttaaggag atcgcggaga
     2641 aacaggggat tccggcgtat ttaatcgata atgcggatga aatccatcgg cactggatcg
     2701 aaggcaaaga gatgatcggt gtcaccgccg gggcctcggc accggagatc ctcgtggaac
     2761 acgtgatcgc gaagctcaaa gcatggggag gataggctgt gaccgaggtg ccggggatcc
     2821 gcgagaatat cgtgttcagt ctaccgcgcg atctcctcgc caaggcggct agcgggcact
     2881 gaatgtattg gccttctttc ccattctcgg ccgcgcgact tgatccctga ttgcatcatt
     2941 gtagggggtg gtatcgttgg gttacttacg gcccgtgaac tcgcccaagc aggccagagg
     3001 gtgatcattc tggagcgcgg tgagaagatc ggcggcgagg cctcgtgggc gggcgggggg
     3061 gtcttggcct ccctctatcc gtggcaaact ccacaaccgg tgcaggcgct catacgctgg
     3121 agccgagcct attatcccca ccttgcccaa gaactggcaa acaccacaac cgtggatccc
     3181 gaatggaccc aatcgggtct actctcgctt gataccgagt accgtcgcga ggcgctgaac
     3241 tgggcgagtc agacggggga gatcatcgaa tatgtggagg ccgagcgcct taaggcgcta
     3301 gaaccccgtg tcgggatcgc tcaccgcggt gcgctgtggc tgccggagct agcgcagata
     3361 cgtaacccgc gcttgcttaa ggctttgagc attgcgctcg agaacagcgg ggtcagtgtc
     3421 tttaagcaca ccgaggtaca ggtgataacc tcttctcggg gagaccgcat agaggggttg
     3481 aggacaacgc gaggcacgtt tgtagccggc agcgtaatag tcgctgccgg ggcatggagt
     3541 ggtacactgc tagaaggttt cagttataaa cctgagatta tcccggtgcg gggacagatg
     3601 atcgtgtatc gcaccccacc cggttttgtg cagcacctgc ttctaaaaca ggattg
//
LOCUS       DASQSL010001605         1767 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_198832, whole genome shotgun sequence.
ACCESSION   DASQSL010001605 DASQSL010000000
VERSION     DASQSL010001605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1767)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1767
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198832"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1591)
                     /locus_tag="VE844_16345"
     CDS             complement(<1..1591)
                     /locus_tag="VE844_16345"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:NF018444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HZC02858.1"
                     /translation="MSISREESHGKKLNVDDILGPQGLLARSGFAYELRRPQLEMADH
                     TYQALSLKSSLIVQGSTGTGKGFAYLIAARCAGDPFIVSTYSKVLQSQLKDLDLPWLQ
                     EVFAAVNRPFTFAILKGRASYVCLHELQKLQTELDEGLIGLQDRASVDAWEPMITWVH
                     DEAESGGLADVDYAPVPLTSELRERMTTDSDHCLGSKQCPMAKQCFAERAKARAKTAD
                     VLVVNHHLLLTDQNLREQGGSFLPNRDVIIVDEAHMLEAVATDVSAIRLTYGRWRRLA
                     QRGRTLAERLSKHLMATAAQGAPQTVDALLRGMSEDTDTLQQAIDEAVTAGAGAQSEA
                     EYTFKSWLADLGDEQKVSVPTDARYLIEATHAWGTAVARVATELHRRRSAPAGEMDED
                     TAEEPEHRALLTEWSKLSDLIARLAYDLAKCLTDEPNYVRFLEKVEGRTPRAVLTRCM
                     IHVGTWLHKVLWAPYTTVSCSATLTTYEPGAGHTFGYWMDRVGHPPADTLQVESPFDY
                     RKNCLLYLPSPPEAFTPPVRKP"
BASE COUNT          340 a          538 c          516 g          373 t
ORIGIN      
        1 atggtttccg cacgggcggg gtgaaggctt ccgggggtga gggcagatac aacaggcagt
       61 tcttgcggta atcgaaaggc gactcgactt gaagcgtgtc ggctggcggg tgcccgacac
      121 ggtccatcca atacccgaag gtgtgccctg ctcctggttc ataggtcgtc agcgtggcgg
      181 aacaactcac cgtggtgtag ggcgcccaca acactttgtg gagccacgtg cccacgtgga
      241 tcatgcagcg cgtgagcacc gccctggggg ttcgtccctc gaccttttcg agaaaccgga
      301 catagttcgg ctcgtcggtg aggcattttg ccagatcata cgcgagccgc gcgatcaggt
      361 cagacagctt agaccattcc gtgaggaggg ctcgatgttc gggctcctct gccgtgtctt
      421 cgtccatctc gcctgcggga gcactgcgtc gccgatgcag ttcagtggcc acgcgcgcga
      481 cggcggtacc ccaagcgtgg gtagcttcga tgagatagcg ggcgtcggtc ggtacgctca
      541 ccttctgctc atcgccgagg tctgccaacc acgatttaaa cgtgtattcg gcttcgctct
      601 gcgccccggc ccccgcggtc acggcctcat caatagcctg ttggagcgta tccgtatcct
      661 cgctcatccc ccggagcagg gcatccacag tctgcggagc cccctgggcc gccgtggcca
      721 tcaggtgttt cgacagccgc tcagccaggg tgcgtccccg ctgcgccaga cggcgccagc
      781 gcccgtaggt caatcgaatg gctgagacgt ccgtcgcgac cgcctccagc atgtgcgcct
      841 catcgacgat gatcacgtct cgattgggta agaaggatcc cccctgctct cgaaggttct
      901 ggtcggtcag gagcaagtga tggttgacaa ccaggacgtc ggcggttttg gcccgcgcct
      961 tggcgcgctc cgcaaagcat tgcttggcca tggggcattg tttgctgccc aagcaatgat
     1021 cgctgtcagt ggtcatgcgc tcccgtagct cactcgtcaa cggcacgggg gcataatcca
     1081 cgtccgcgag cccaccagac tccgcctcgt catgcaccca cgtgatcatc ggctcccagg
     1141 cgtcgaccga ggcgcgatct tgcaacccaa tgagcccctc atcaagctct gtttggagct
     1201 tttgcagttc gtgcaaacag acgtatgagg ctcgtccctt caaaatggca aaggtaaagg
     1261 gacggttgac cgcggcgaag acctcttgga gccacggaag atcaaggtct ttcagctggg
     1321 attgcaagac tttggaatac gttgagacga tgaacggatc gccggcacag cgtgcagcaa
     1381 tgaggtaggc aaaacctttt cccgtgcctg tggaaccctg gacaatgagc gatgacttca
     1441 agctcagggc ctgataggtg tggtcagcca tctccaattg cgggcgacga agctcatacg
     1501 caaaaccact gcgcgcgaga agtccttgcg gccccagaat gtcgtcaacg ttaagttttt
     1561 tgccatggga ttcttcacgt gatatactca taaattagtt acccctgaat ggttgttcct
     1621 gaatggcaaa gcccacgcca tgctggaaag atccatgagg gcttggcgat tcgcggtcgc
     1681 caagccctcg ccctcattgt ttcaaccctg accatgctca tccacctcta ccgccgcaag
     1741 cggcatccca tctgtctctt tgtcgat
//
LOCUS       DASQSL010001606         1265 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_171209, whole genome shotgun sequence.
ACCESSION   DASQSL010001606 DASQSL010000000
VERSION     DASQSL010001606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1265)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1265)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1265
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171209"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            226..>1265
                     /locus_tag="VE844_16350"
     CDS             226..>1265
                     /locus_tag="VE844_16350"
                     /inference="COORDINATES: protein motif:HMM:NF033592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC02859.1"
                     /translation="MIESITVITLLLSALDRVPLQAIFDRDPYESRRSALPGARLVKV
                     LVVYQLIRTEKLRGLIRTITEHTGLQAVLGGTVALNTLSNGVAQRDVGQMVEAWMRVL
                     QTYGPWLARMGRKFARIAVVDASLIKLSLLAYSWAEYRRQTGAAKMHAVLDWARGIPQ
                     QLVVTIGKVHDLKGAAPLRWARHWTYIFDRAYLGFDFLTTLLEAGAHFVVRFKAGISY
                     RILERYAVPQAPATAGFRLTSDWTISLPGWEGVLLRLVSYQLPDGKLIRVLTDRFELS
                     AVSVAQLYKERWTIAVSSQGHINQSVKVRPRLKDSGLVAWEVPWRESKTAEPSDNVLE
                     IEYRQSTRLQRAV"
BASE COUNT          267 a          325 c          380 g          293 t
ORIGIN      
        1 tcgagcatcg accactacac ctgattgaca actgcaacgc ctagcattat tttcctcttt
       61 catgaaaaag ggtgtttatt tcccttcagt tctgtcccat atgtaatagc ctgatataaa
      121 aagagtttat ggtctatgaa aatgaaatga tcggaaggga actgagaatc ctccggctgt
      181 caggtagatt gatattgaca aatatactcc tcaaggagga ttcgcatgat cgagtctatc
      241 acagtcatca cgttgttgct ctctgccctg gaccgcgttc ccttgcaagc gatctttgat
      301 cgtgatccgt atgaatcgcg ccgcagtgcg ctgccgggtg cacgcctggt caaagtgctg
      361 gtcgtctatc agctgatccg caccgagaaa ctgcgcgggc tgatccggac aatcaccgaa
      421 cacaccgggt tgcaagcggt cttgggcggg acggttgccc tcaatacctt gtccaatggc
      481 gttgcccagc gggatgtcgg acagatggtc gaggcctgga tgcgggtgtt gcagacttac
      541 gggccatggc tggcgcggat gggccggaag ttcgcccgca tcgcggtggt tgatgcgagt
      601 ttgatcaagc tctcgctgct agcctacagt tgggccgagt atcgccggca aacaggtgcg
      661 gcgaagatgc atgcagtctt ggattgggcg cgtggcatcc cccagcagtt ggttgtcact
      721 atcggcaagg tgcatgactt gaaaggggcc gcacccttgc gctgggccag gcattggacg
      781 tacatctttg atcgcgccta tctggggttt gattttctga ctaccctgct ggaagcgggg
      841 gcgcactttg tggtgcgctt caaagcgggc atcagctacc gcattctcga gcgctatgcg
      901 gtgccgcagg ctccggccac ggcgggcttt cgcttgacca gtgattggac catcagtttg
      961 ccaggttggg aaggagtcct cttgcgactg gtcagctacc agttgccgga tggaaagttg
     1021 attcgggtct tgaccgatcg cttcgagctg agcgccgtca gcgtcgcgca gttgtacaaa
     1081 gaaagatgga ccattgccgt gtccagtcaa gggcacatta accagtcggt gaaagtccga
     1141 ccgaggctaa aagactcagg cctcgtagcc tgggaggtgc cgtggcgcga gagcaagacg
     1201 gcggagccct ccgacaacgt acttgaaata gagtatcggc aaagtaccag gttgcaacgt
     1261 gcagt
//
LOCUS       DASQSL010001607         1220 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_148411, whole genome shotgun sequence.
ACCESSION   DASQSL010001607 DASQSL010000000
VERSION     DASQSL010001607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1220
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148411"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            80..1189
                     /locus_tag="VE844_16355"
     CDS             80..1189
                     /locus_tag="VE844_16355"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012929690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004024 - alcohol dehydrogenase activity,
                     zinc-dependent [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase"
                     /protein_id="HZC02860.1"
                     /translation="MLAMNYRGPLRVRIDHKPMPEILHPQDAIVRVTRACICGSDLHL
                     YNGSVPDTRVGMTFGHEVTGVVEQLGQEVENLKIGDHVLVPFNIACGKCVFCQQELYG
                     NCHESNSQATAVGGIFGYSHTAGGYDGGQAEYVRVPYADVSPTVIPEGMDPDDAVLLT
                     DVVPTGYQAAEMGGIQPGDTVVVFGAGPVGIMAARCAWLFGAGRVIVIDHLDYRLEFV
                     KTYAPCEAYNFKSLEDPVVFLKRTTDWIGADVCIDAVGAEAAGSAMQTILGRKLLMQG
                     GSATALHWAINSVKKSGIVSIVGVYGPIDTLVPIGNVVNKGLTIRGNQASVKRLLPRL
                     IEHVQNGIIDPKALITHRIPLEDVSDAYQGVADDS"
BASE COUNT          264 a          302 c          383 g          271 t
ORIGIN      
        1 acgcaacagc gggcgcacta tcttttggca cggcgacaaa gaaggcggca gacgttaaaa
       61 aaggaaagga gccagttcta tgcttgctat gaattaccgg gggcctttga gggtccgcat
      121 cgatcataaa cccatgccgg agatcctgca tcctcaggat gccatcgtcc gggtcacgcg
      181 agcttgtatc tgtggttccg atctgcattt atacaatggg tccgtgccag atacccgggt
      241 ggggatgacg tttggccacg aggtcaccgg tgtggtggag cagctcggtc aggaagtgga
      301 gaacctgaaa atcggtgatc acgttctggt gccttttaat atcgcctgcg gaaagtgtgt
      361 cttctgccag caggaacttt atggaaattg ccatgaatcc aattcccagg caaccgcagt
      421 agggggcatt ttcggttatt cacataccgc aggcggctac gacgggggac aagcggaata
      481 tgtccgcgtc ccttatgcag atgtgagtcc gacggtcatt ccggaaggca tggatccgga
      541 cgatgcggtg ctactcaccg atgtcgtgcc gacgggatat caggccgcgg aaatgggcgg
      601 cattcaaccc ggagacacgg ttgtggtttt tggagccggt ccggtaggca tcatggcggc
      661 cagatgcgct tggctcttcg gggcaggacg ggtgatcgtg attgaccacc tggattaccg
      721 tcttgagttt gtgaagacct atgcgccctg cgaggcctat aacttcaagt cactggaaga
      781 cccggtggta ttccttaagc ggaccaccga ctggataggg gctgacgttt gtattgatgc
      841 tgtgggggcc gaggctgccg gcagtgcgat gcagacgatc cttgggagga aattgctgat
      901 gcagggcgga tcggccaccg cgctgcactg ggcgatcaac tcagtgaaaa agagtgggat
      961 tgtctccatc gtcggcgtgt atggcccgat tgacaccctc gttccgattg ggaatgtggt
     1021 caacaagggc ttaaccatcc gggggaacca ggcatcggtg aagcggctgt tgccgcgact
     1081 aatcgagcat gtgcagaacg gcatcatcga tcccaaagcc ctgatcacac accgcatccc
     1141 tttggaagat gtgtcggatg cgtaccaggg agtcgcggat gattcgtgat gtcgtatgat
     1201 ccgctcatga tgacctcatt
//
LOCUS       DASQSL010001608         1241 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_134982, whole genome shotgun sequence.
ACCESSION   DASQSL010001608 DASQSL010000000
VERSION     DASQSL010001608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1241
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134982"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..922)
                     /locus_tag="VE844_16360"
     CDS             complement(<1..922)
                     /locus_tag="VE844_16360"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZC02861.1"
                     /translation="MQSLQERVSGPVLHRGDPDYEQARRAPGWNEIKPERYPDLIVQV
                     ASEDDVIETVNFARDQHMKVGIRGGGHNWCAVALQEGGILLDLSRLKKVEIDAEARVA
                     TAEPVVSNRYLAKRLAEHGLAFPVGHCPCVPLSGFILNGGLGWNGGEWGISCFSLLSV
                     DVVTADGNLVTASETENTELLWAARGAGPGFFGVATKYRVRLYPLPKAITTSTLMYPL
                     EKLPEAVKWATETVNTMPRNVEFTLYLASAPPSVADRYEKVCILSATAFADSDEEATE
                     ALSALATCPLEDCVMEDLHASTPFEVLFDMA"
BASE COUNT          248 a          388 c          347 g          258 t
ORIGIN      
        1 ccgccatgtc aaacagcacc tcaaagggcg tgctggcatg caggtcctcc atcacgcagt
       61 cttccagtgg acaagtcgct agggcagaga gtgcctcggt ggcctcttcg tccgaatcgg
      121 cgaacgcggt ggcggacagg atgcacacct tctcatatcg gtccgcaaca gacggcggag
      181 cgcttgctaa gtacaacgtg aattccacgt tcctgggcat cgtgttcacc gtttccgttg
      241 cccacttcac cgcctctgga agtttctcga gaggatacat cagcgtgctg gtggtgatgg
      301 ctttcggaag gggatacaac cgcacgcgat atttcgtcgc gacgccgaag aacccaggcc
      361 ctgcaccgcg tgctgcccag agcagttccg tgttttccgt ttcacttgcc gtgacgagat
      421 tgccgtcggc cgtcacgaca tctacggaaa gtaggctgaa gcacgagatt ccccactcac
      481 caccattcca gccgaggccg ccgttgagga taaagccact gaggggtaca caaggacagt
      541 gtccgaccgg aaatgccaga ccatgctccg ccagccgttt ggcgagataa cgattagaca
      601 cgaccggttc ggcggtcgcc acgcgggctt cggcgtcgat ctccaccttc ttgagacggg
      661 acaggtccag caggataccg ccctcttgca gtgcaacggc acaccagttg tgtccacccc
      721 cacgaatgcc gaccttcatg tgctggtcgc gggcgaaatt gacggtctcg atgacgtcgt
      781 cttcggaagc gacctgcacg atcaaatcgg gatagcgctc cggctttatc tcattccacc
      841 ccggagcgcg tctcgcctgc tcatagtcag gatctccgcg atgaagcacc ggtccggaaa
      901 cgcgctcttg taatgattgc atgctcatct ctctcctttc cagcgcttca tttcgcacca
      961 acgagagctg aactcgtgcg tggtcatcag cgtggggttc accttgccgg tctccatcag
     1021 ccggaagatc cggcgaagcc gctcacggcc cccgcgattc aggctgcaaa ggaaggaaaa
     1081 ccccggccca gccctcatta tacgggaggg tagccgccaa caactgggtt tagggaggat
     1141 gccgatggtg ggcttgcccc tcctcccgac gtctatgtgt cgtccgttgg ctcttggatc
     1201 ggaaggtcca cctcggtccc cataaagtcg ttcatgtaat t
//
LOCUS       DASQSL010001609         1980 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_171252, whole genome shotgun sequence.
ACCESSION   DASQSL010001609 DASQSL010000000
VERSION     DASQSL010001609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1980)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1980)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1980
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171252"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            293..1813
                     /locus_tag="VE844_16365"
     CDS             293..1813
                     /locus_tag="VE844_16365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010035283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02862.1"
                     /translation="MATTIIDTAFHPESSTSPARCVAHQLDGAQRQQLAIDVLAGNGS
                     VTELAERHQVSRKFLYQQADKGEQALTQVFSPPPSVEEEKVLFYLPVTKAWLRQVVLA
                     LVLLCHSSFRGVMAFFREVLDCPLALGSIHNIVRQAVMQARQLNAGEDLSAVRAAGHD
                     EIFQSRQPVLVGVDLDSTYCYLLAAEDQRDGETWAIHLWDLAAKGLQPDYTVADGGKG
                     LRAGQALAWPEVPCRGDVFHALQNRGQLCQRLDNRAYAAINACEHLERKMHKAKQQRQ
                     GQRISSALAQARERQTQAMAVADQVRTLTHWLREDILALAGPDATTRQMLYDFVLEAL
                     AQLEPLEPRLYPLRQRLANQRAALLAFARDLDQALAELASRYAVPLESVRALLHWQGQ
                     PFHTHAYCQQGDELRRQLRHLFFPLQQDLQALTVHRASSLVENLNSRLRSYFFLRRDI
                     GPAYLELLRFFLNHHPYLRSAKPERRGKTPAQLLTGQDHPHWLEMLGFQRFCRAAA"
BASE COUNT          380 a          608 c          565 g          427 t
ORIGIN      
        1 ccagccttta acgggtgtga tccactattt aatgaaggca tttcctaaga ctaggacata
       61 gaggcttatt cctgcgcagc ccagggtgaa ggcctcagcg ggcagccgga tgacactatc
      121 cggcaggcaa cccaggatgt gggccggttc ctttatccgg ccaaagttca gtaagtggac
      181 taaactttta ttgggatggt tcaatctagg gtaacaattt aaggcggtag tcatcgccag
      241 tgtctgagtt gggagggtaa actcccgatg gaaaatttct ggagacaccc ctatggctac
      301 caccattata gataccgctt ttcacccgga gtcgtcaacg tcccccgccc gctgcgtcgc
      361 gcaccagctt gacggcgccc agcgccaaca gttggctatt gacgtcttag ccggcaacgg
      421 ctcagtcact gaattggccg agcgccatca ggtcagccgt aagtttctct atcagcaagc
      481 ggacaaaggt gagcaggcgc tcacccaagt gttttcaccg ccaccctcgg tggaggagga
      541 gaaggtgctg ttctatctgc cggtaaccaa ggcatggcta agacaagtag tgctggcatt
      601 ggtgctgcta tgccacagtt ccttccgggg ggtgatggcg tttttccgtg aggtgctgga
      661 ctgccccctg gcgctgggca gcatccataa tatcgtcagg caagcggtga tgcaggcgcg
      721 ccagctcaat gccggagaag acttgagcgc ggtgcgtgcc gccggtcatg acgagatttt
      781 ccaaagcagg cagccggtac tggtcggtgt tgatctggat tcgacctatt gttatctgct
      841 ggccgctgaa gatcagcgcg acggtgagac ctgggcgatc catctgtggg acttggctgc
      901 caagggttta cagccggact acaccgtggc cgatggtggt aaggggttgc gtgccggcca
      961 agcgctggct tggcctgagg tcccttgtcg tggcgatgtg tttcatgccc tccagaaccg
     1021 gggccagttg tgtcagaggc tggataaccg ggcctatgcc gccatcaatg cctgtgaaca
     1081 cctcgaacgc aaaatgcaca aggccaagca gcagcgccaa ggtcagcgga tttccagcgc
     1141 gctggcacag gcgcgggagc ggcaaacgca ggccatggcg gtagccgatc aggtgcgcac
     1201 gctcacccac tggctgcgcg aagatatcct cgccttggcc gggcccgacg ccactacgcg
     1261 ccagatgttg tatgactttg tcctcgaggc gctagcgcaa ctcgagcccc tcgaaccgcg
     1321 cctctatccc ctacgccagc gtctcgctaa ccagcgcgcg gccttgctgg ccttcgcccg
     1381 cgacctcgac caggcactcg ccgagttggc gagccgctat gccgtgccac tcgaaagcgt
     1441 gcgcgccctg ctgcattggc aaggccagcc cttccatacc cacgcctatt gccagcaagg
     1501 tgatgagctt cggcgtcaac tgcgccacct gttcttcccc ctgcaacagg atctacaggc
     1561 gctgaccgtc catcgggcca gttccttggt cgagaacctc aacagccgcc tgcgcagcta
     1621 cttcttcctg cgccgtgaca tcggcccggc ctatttggag ttgctgcgct ttttcctcaa
     1681 ccatcaccct tatctgcgca gcgccaagcc tgaacgccgc ggcaaaacac cggcacaatt
     1741 gctcaccggt caagaccatc cgcactggtt ggagatgctc ggctttcagc gcttctgccg
     1801 cgctgcagcc taaacacagc ggttccttcg ttgtcattcc acatcagtct cgacccagag
     1861 actggaactt cccctgcgtg tgttacccta atttcgcagt ttttgaacca tgcccagatt
     1921 tttactcctg ctttgcttct tgcgtccacg ccgacccgtg gccgggggcg ggtgtttgtt
//
LOCUS       DASQSL010001610         1189 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_135049, whole genome shotgun sequence.
ACCESSION   DASQSL010001610 DASQSL010000000
VERSION     DASQSL010001610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1189
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_135049"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..244
                     /locus_tag="VE844_16370"
     CDS             <1..244
                     /locus_tag="VE844_16370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02863.1"
                     /translation="GSDAPSARTIQRVRKRNGIARLPKRVPPSASARRIPEQVLKRAR
                     YCLKLRPHLGPERVVWDVQNGEPLQISASTVKRLKR"
     gene            245..1114
                     /locus_tag="VE844_16375"
     CDS             245..1114
                     /locus_tag="VE844_16375"
                     /inference="COORDINATES: protein motif:HMM:NF012870.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HZC02864.1"
                     /translation="MHEARHPAPPPSPAVWRFYERRHPHSLWHGDFMDNITLTDTQQV
                     AHQFTLQDDYSRGYVFCDLALDHDQRTVIRALMAAMRQWQVIPKALLFDNGSPFKGTL
                     LSMFCKKLGIRVIHTAVRHPQTNGKLERAFQDDMRDFYRQYEAWLLDHLRHDLPAYVH
                     YRNCIRGHRALGGKPSITRLQRRTENAPARILNQLESYAVYEVGRQTVKMDGAIRVLG
                     RSAQLDVRACGQEVTMYETLRGLEVKTPEGRWYLFPDYQRFRQLSCTAPWNMPASFSF
                     ERQQGYCPQIAVA"
BASE COUNT          260 a          363 c          346 g          220 t
ORIGIN      
        1 gggatcagac gcgcccagcg cgcggacgat tcaacgggtc aggaaacgta atggtattgc
       61 tcgacttccg aagcgtgtcc caccctctgc gtcagcacga cgaataccgg agcaggtcct
      121 gaagcgggcc cggtattgcc tcaagctgag gccgcacctc gggcctgagc gcgtcgtgtg
      181 ggatgtacag aatggcgagc cgcttcagat cagcgcctcc acggtcaagc gtctcaagcg
      241 ctagatgcac gaggcccgcc atcccgctcc gccgccgtcc ccagccgtgt ggcggttcta
      301 tgaacgacgc cacccgcata gtctctggca tggggacttc atggacaaca tcacgctcac
      361 cgatacccag caggtggccc atcaattcac cttgcaggac gattactcgc gggggtacgt
      421 cttctgcgac ctcgcgctcg accatgacca gcgcaccgta atccgggcgc tcatggccgc
      481 catgcggcag tggcaggtga tccccaaggc cttgctcttt gacaatggct cacccttcaa
      541 aggcacgttg ctctcgatgt tctgcaagaa gctgggcatt cgtgtcattc acaccgccgt
      601 ccggcatccc caaaccaacg gtaaactgga gcgggcgttc caggacgata tgcgggattt
      661 ctatcgccag tacgaggcgt ggctgctgga tcatttgcgg cacgacctgc ccgcctatgt
      721 ccactaccgc aactgcatcc ggggtcatcg ggcattggga ggtaaaccgt ccatcaccag
      781 actgcagcgg cgcacggaga atgcaccagc tcgtatccta aaccagcttg aaagctatgc
      841 ggtttatgag gtggggcggc agacggtgaa gatggatgga gccattcggg tgctgggacg
      901 cagcgcccaa cttgatgtga gagcatgcgg acaggaagtg accatgtacg agaccttacg
      961 aggcctggag gtcaagacac cggaaggacg ctggtatctc ttcccagact accagcgttt
     1021 ccggcagctc agttgtaccg ccccctggaa catgccggcg agcttctcgt tcgaaagaca
     1081 gcaagggtac tgtccgcaaa ttgctgtcgc atagcgacaa tgaccctcta cacatttctg
     1141 cctggatcac gacaaggagc aaggggaaaa gaccccaaaa agtccagag
//
LOCUS       DASQSL010001611         1506 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_171269, whole genome shotgun sequence.
ACCESSION   DASQSL010001611 DASQSL010000000
VERSION     DASQSL010001611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171269"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..602)
                     /locus_tag="VE844_16380"
     CDS             complement(<1..602)
                     /locus_tag="VE844_16380"
                     /inference="COORDINATES: protein motif:HMM:NF019403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heparan-alpha-glucosaminide N-acetyltransferase
                     domain-containing protein"
                     /protein_id="HZC02865.1"
                     /translation="MNNPRLLALDQMRGLVMVLMAVDHASIIYNSGRLALDSAATYLP
                     GTPLPLDQFLTRWITHLAAPTFVFLAGVALALSCHKRTALGQPNRAINVDIMIRGLII
                     ASIDLLWVPLIAHRWTLQVMFAMGTAMLAMAWLRRLSDMTLLIIASMWLLIGEALTTL
                     WWDPTEDDPALPLALAMAVFYSDELSVIYPVLPWLAVMMLG"
     gene            681..>1506
                     /locus_tag="VE844_16385"
     CDS             681..>1506
                     /locus_tag="VE844_16385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012257179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF92 domain-containing protein"
                     /protein_id="HZC02866.1"
                     /translation="MVGFEQFAVRLSLGFGLSALIGCAAYRRGLLCRSGLVGALLIGT
                     VTLSLGGWSWGVLLVAFFISSSVFSRVDRGLKESLTEKFSKGSRRDLAQTLANGGLGA
                     LIASLHFFAPAPWMWVAFSAAIATVTADTWATELGVLSRSRPRLITSGKEVETGISGG
                     ITAMGVIASLAGAMLIGLLASALTWMGDFKWIGIGAPWSAAGVFLVVSLAGLWGSLFD
                     SWIGATVQAVYFCAACGKETEHHPTHRCGSPTRLLRGWRWLDNDGVNFLSSLAGAVV"
BASE COUNT          307 a          410 c          454 g          335 t
ORIGIN      
        1 ccgagcatca tcacggctaa ccagggtaac accggataga taacggacaa ctcatcgcta
       61 tagaatacgg ccatcgccag cgctaaaggc aaggcgggat cgtcttccgt tggatcccac
      121 cagagggtgg taagggcttc cccgatcagc aaccacatcg aggcgataat cagcagtgtc
      181 atatcgctca atcggcgcaa ccacgccatg gcgagcatgg ccgtacccat ggcaaacatg
      241 acctggagtg tccatctatg ggcaatgagt gggacccaca ggagatcaat ggaggcgata
      301 ataaggccgc ggatcatgat atctacgttg atggcccggt ttggctgtcc cagggcggtg
      361 cgcttatggc aacttagcgc gagcgccacc ccggcgagga atacaaacgt gggggcggcc
      421 aagtgtgtga tccaacgtgt caagaactga tcaaggggca gcggtgtgcc cggcagatac
      481 gttgcagccg aatcgagcgc cagtctgccg ctgttataga tgatcgaggc gtggtccaca
      541 gccatcagta ccatcaccag gccacgcatt tgatcaaggg ccagcagacg agggttattc
      601 acattcttca tcacgcgcat ttaacataga tacctcgatt atcctttacc aggcaaatct
      661 taggttaaaa aaagctcatc gtggttgggt ttgaacagtt tgctgtccgt ctctccctgg
      721 gcttcggcct ctctgcgctt attggctgcg ccgcctatcg ccgtggccta ctctgtagat
      781 ccgggctggt aggagccctc cttattggca ccgtaacatt gagcttgggt ggctggagtt
      841 ggggcgtact cctcgtcgcc ttcttcattt catcgagcgt gttttctcgg gtcgatagag
      901 ggctcaagga gtcactgacc gagaagttca gcaagggcag ccggcgtgat ctcgcccaaa
      961 cgctcgccaa tggtggctta ggcgcactga tcgctagcct gcacttcttt gcaccggcac
     1021 cgtggatgtg ggttgccttc tcagccgcaa tcgccacagt tacagcagac acttgggcga
     1081 ccgaactcgg tgtgttgagt cgctcccggc cgcggcttat tactagcggg aaagaggttg
     1141 agaccggaat ctcaggcggg atcaccgcga tgggcgttat agcctccctt gcaggggcga
     1201 tgctcattgg gctcctggcc tctgccctca cttggatggg agacttcaaa tggataggga
     1261 tcggcgcacc atggagtgcc gcaggggtgt tcctggtggt atcgcttgcc ggtctatggg
     1321 gctcattgtt tgattcgtgg ataggcgcaa cggtgcaggc tgtctatttc tgcgctgcct
     1381 gtggcaaaga gacggagcat catcccacgc atcggtgtgg cagccccacc cgtctcctgc
     1441 gtggctggcg ctggctggat aacgatgggg tgaacttctt gagctcattg gccggcgcag
     1501 tagtgg
//
LOCUS       DASQSL010001612         1617 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_91782, whole genome shotgun sequence.
ACCESSION   DASQSL010001612 DASQSL010000000
VERSION     DASQSL010001612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91782"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     regulatory      48..164
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            196..>1617
                     /gene="thiC"
                     /locus_tag="VE844_16390"
     CDS             196..>1617
                     /gene="thiC"
                     /locus_tag="VE844_16390"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HZC02867.1"
                     /translation="MNAVPESFDRPIAHVDEQVVQPFPNSHKIYVQGSRADIKVPMRE
                     IGLADTSTYMGHEKNPPIWVYDTSGPYTDPAINIDIHSGMPELRLRWVEERGDTELLY
                     DLSSDYGRKRARDSALAALRFPQIPKPRRAKPGINVTQMHYARHGIITAEMEFVAIRE
                     NMRLEALKDAALRKRHKGMSFGAEIPDEITPEFVRAEVARGRAIIPANINHTELEPMI
                     IGRNFLVKINANIGNSAVSSSIAEEVEKMTWAIRWGADTVMDLSTGKHIHETREWIIR
                     NAPVPIGTVPIYQALEKVGGKAEELTWEIYRDTLIEQAEQGVDYFTVHAGVRLAYIPL
                     TARRVTGIVSRGGSIMAKWCLTHHKESFLYTHFEEICAIMRAYDVAFSLGDGLRPGSI
                     ADANDEAQFAELMTLGELTRIAWQHDVQVMIEGPGHIPMQLIWENMEKELAACSEAPF
                     YTLGPLTTDIAPGYDHITSAIGAA"
BASE COUNT          383 a          440 c          441 g          353 t
ORIGIN      
        1 gtgagcagtt gctaaagata agacttatta tatatagtgg caatcgcaat tacagctagg
       61 ggtgccctgg atattttata ctggatattt tataccagag ctgagagata ccctttgaac
      121 ctgatccggt tagtaccggc gtagggaagc acagcccacc ccctacgcct tgtatagatt
      181 caacgaggtg tagctatgaa tgcagtaccc gaatccttcg atcgtccaat tgcccacgtt
      241 gacgagcagg tggttcaacc ctttcccaac tcacataaga tctatgtcca aggcagcagg
      301 gcagacataa aagtgcctat gcgggagatc gggcttgcgg atacatcgac ctatatgggc
      361 catgagaaaa acccacccat ctgggtatat gatacctcgg gaccctacac cgatccggca
      421 atcaatatcg acattcacag cggtatgccc gagctccgct tgcgctgggt cgaggaacgc
      481 ggcgacaccg agctattata cgatctgagc tccgactacg gccgtaaacg cgctcgtgat
      541 tccgcactcg cggcgctacg ttttcctcaa atccctaagc ctcgccgcgc gaaaccgggc
      601 ataaatgtaa cgcagatgca ttatgccagg catgggatca ttaccgccga gatggaattc
      661 gtcgctattc gcgagaatat gcggcttgaa gcgcttaaag atgcggccct gcgtaaacgg
      721 cataagggca tgagcttcgg tgctgagatc cccgatgaaa tcaccccgga attcgtgcgc
      781 gccgaggtcg cgcggggccg ggccatcatc cctgccaata tcaaccatac cgagttggag
      841 ccgatgatca tcggccgtaa ctttctggtc aagatcaacg ccaatatcgg caactcagca
      901 gtaagctcga gtattgctga agaggtcgaa aagatgacct gggctatccg ctggggcgca
      961 gacaccgtca tggacctctc gacaggcaag cacatccatg aaacccgcga gtggatcatc
     1021 cgcaatgctc cggtaccgat agggacagtg ccgatctacc aagccctgga aaaggtcggt
     1081 ggcaaggcgg aggaactcac ctgggagatc tatcgcgata cgctcatcga acaggctgag
     1141 caaggggtgg actattttac tgtgcacgcc ggggtgcggc ttgcctatat ccctctgaca
     1201 gcccggcgcg ttaccgggat cgtctcgcgc ggaggctcga tcatggccaa gtggtgtctc
     1261 acccatcata aagagagttt tctttacacg catttcgagg agatctgcgc gatcatgcgg
     1321 gcctacgatg tggccttctc tttaggtgat ggtcttcgcc cgggctcgat tgccgatgcc
     1381 aatgatgagg ctcagtttgc cgaacttatg accttggggg aactcacccg gatcgcttgg
     1441 cagcatgatg tacaggtcat gatcgaaggc cccggtcata tccctatgca gcttatctgg
     1501 gagaatatgg aaaaggagtt ggccgcgtgc agcgaggcgc ctttctatac cttgggaccg
     1561 ttaaccaccg atatcgcccc tggttatgat catattacct ccgcgatcgg ggcggcc
//
LOCUS       DASQSL010001613         1508 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_171278, whole genome shotgun sequence.
ACCESSION   DASQSL010001613 DASQSL010000000
VERSION     DASQSL010001613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1508
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171278"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..984)
                     /locus_tag="VE844_16395"
     CDS             complement(<1..984)
                     /locus_tag="VE844_16395"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02868.1"
                     /translation="MIVPIVAIPPSIELGLAPYRDLFPRIETYQHIKEYCTGLVVLEK
                     PSINRLAACLVEGPAQSSINKALTRSPWSGDAVNERRLERIQRHHQGKGLTIGIIDST
                     FSHHPRGEKKIYGVYRYWDYVNGCYTYAMQLVTAAIATGERCDGLDSRIYHRFHQSQE
                     LAYLEATRLSPDELDRQQWLRRLVELLAYDLHRRQHKTKPQLAAELIEQMDASEMAPD
                     VYTVDSALFAPAVIEAMEKYGKPWLADSEKTRLVFWQGQMFNCETFAQSRPDQAYRPV
                     KLTRRGQEKTYWVFTCVVRIKKYGKVRMAVIYDNPDRQGKPIYCFTRQLTWN"
     gene            1357..>1508
                     /locus_tag="VE844_16400"
     CDS             1357..>1508
                     /locus_tag="VE844_16400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014332159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3175 domain-containing protein"
                     /protein_id="HZC02869.1"
                     /translation="MEKSTSKPRFWSAEVTKRSNALDLDPGVFTWKDPKKIAESLKRS
                     AEESTRR"
BASE COUNT          342 a          459 c          379 g          328 t
ORIGIN      
        1 attccaggtc aactgccggg tgaaacaata gatcggtttg ccctgccggt ccggattgtc
       61 ataaatgacc gccatccgga ccttgccgta tttcttgatg cgtacgacac aggtaaagac
      121 ccagtaggtc ttctcctggc cccggcgcgt cagcttcacc gggcgatagg cttggtcggg
      181 ccgggattga gcaaacgtct cgcagttgaa catctgcccc tgccaaaaca ccaaccgcgt
      241 cttctcgcta tcggccagcc agggcttgcc atacttctcc atggcctcaa tcaccgccgg
      301 ggcaaacaac gcgctatcga ccgtgtagac gtccggcgcc atctccgagg cgtccatctg
      361 ctcaatcaat tccgccgcca gttggggctt cgtcttgtgc tgccgccggt gcagatcata
      421 ggccagcagc tcaaccaacc gtcggagcca ctgctgtcgg tccagctcat ctggggacag
      481 ccgcgtggcc tccaaatagg ccaactcttg actctggtgg aagcgatggt agatccggga
      541 atccaaccca tcacagcgtt cccccgtggc gatagccgcc gttactaact gcatcgcata
      601 agtataacac ccattgacgt aatcccagta ccgatagacc ccataaatct tcttctcccc
      661 tcgtggatga tgactgaacg tactgtcgat aatcccgatg gtcagcccct tcccctgatg
      721 atgcctctgg attctctcca accgccgctc attgacagcg tctcccgacc acggcgaccg
      781 tgtcagcgcc ttgttgatcg agctttgggc tggtccctcg actaaacacg ccgccagtcg
      841 attgatgctc ggtttctcca gcaccaccaa cccggtgcag tattccttga tgtgctgata
      901 cgtttctatc cggggaaaca aatctcggta cggggccaac ccgagctcga tgctgggtgg
      961 gatcgctacg atgggcacaa tcatctcctt cctctccgtc tctcactgga atcgaacccc
     1021 catcataggc actcacggct atctttcgcc agcccagttc acccttaagt gaaaaagtcg
     1081 tgtgatcctg cctttgacct cctcgggatc aaagagaaac gtgaggccgg tgagctcgct
     1141 cactctcttg atgacggttg agatctctgc gttctcaaaa gcaaaggctg tctcctcggc
     1201 ccgaggcccc taaaagggag cacataccac aacaaaagca aacactaccg cgagaatacg
     1261 tatgggagga aagcacatga tgatttgatc ttacggtagg ggaggaatgc tgcttgttca
     1321 tgagaaatct gtcaacagca ggtctaaacg tataccatgg aaaagagcac atcgaaaccc
     1381 cgtttctggt ccgcagaggt gacgaagcga agcaatgcgc tcgatctcga tccgggtgtc
     1441 tttacctgga aggatccgaa aaagatcgcg gaatcactca aacgttcggc tgaggaaagc
     1501 acgcggcg
//
LOCUS       DASQSL010001614         1182 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_148483, whole genome shotgun sequence.
ACCESSION   DASQSL010001614 DASQSL010000000
VERSION     DASQSL010001614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1182
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148483"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..578
                     /gene="istB"
                     /locus_tag="VE844_16405"
     CDS             <1..578
                     /gene="istB"
                     /locus_tag="VE844_16405"
                     /inference="COORDINATES: protein motif:HMM:NF013828.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HZC02870.1"
                     /translation="MGILDLISWEWRDCTLQELASLRFVASGSNVLFLGPPGVGKTHL
                     AIALGLKALEAGLSTYFVSVPELIDQISQDGQRGELLKRMQQLCKPRVLLLDEMGYLP
                     LERPIATFLFQLVAKRYEKGAIILSSNKSFSEWGDLFTDQVLATALLDRLLHHSILIN
                     IRGQSYRLKEKRQSGVFQPPPALETTTAEPS"
     gene            656..1054
                     /locus_tag="VE844_16410"
     CDS             656..1054
                     /locus_tag="VE844_16410"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC02871.1"
                     /translation="MAPTPDALEQRRQEAIQRYLDGDPIEQICREMRCSKSWLYKWKN
                     RYQVTEPDWARPRSRRAVTTPSKTPAAIEAQIVRLWQTLSPSGSPTRSARVIRDQLGQ
                     YGGASVPSIRTIYRILNRHAKEVNSHTSTS"
BASE COUNT          271 a          335 c          323 g          253 t
ORIGIN      
        1 gaatggggat tttagacctc atatcttggg aatggcgcga ttgcaccctc caagagttgg
       61 ccagcctgcg ctttgtggcg agcggctcca acgtcctatt tctgggacct ccaggcgtgg
      121 gaaagaccca tttggccatt gctttaggtc tcaaggcgct cgaggctggg ctgagcacct
      181 attttgtcag tgtgcctgaa ctcatcgatc agatcagcca ggatggccaa cgtggagagc
      241 tgctcaaacg catgcagcag ctgtgcaaac cgagggtctt acttttggat gagatggggt
      301 atttacctct agagcgcccc atcgccacct ttctgttcca gttggtggct aagcgctatg
      361 aaaaaggcgc catcattcta agcagcaaca agtccttcag cgagtggggc gatctcttta
      421 cggatcaggt gctcgccacc gccctgctcg accgactgct gcatcattcc atcctgatca
      481 atatccgggg ccagagctat cggctcaaag aaaaacgaca atcgggagtg ttccagccgc
      541 cgccagcact cgagacgacc actgctgagc catcctgatg gacgccatgc aaccggagtg
      601 tgccatgaca tggagaacaa atgaccatat agaaggccca aatcgaggtg ccgaaatggc
      661 acctacgccc gatgcccttg aacagcgccg tcaagaggcc atccagcgct atctcgacgg
      721 tgacccgatt gagcagattt gccgggagat gaggtgttcg aagagttggc tctataagtg
      781 gaagaatcgc tatcaggtca ccgagcccga ctgggccagg ccccgctcgc gacgagcagt
      841 gaccacgccg agcaaaaccc cggcggcgat cgaagcgcaa attgtccggc tgtggcagac
      901 gttatcacca tccgggtcgc caacccgcag cgctcgggtc attcgtgatc agctcggcca
      961 gtatggtggc gcatcggtcc cctcgattcg caccatctat cgcattctca atcgtcatgc
     1021 caaggaggtg aactcgcaca catcgacatc gtaagtccgg cagccttttt ttatcgctca
     1081 agtggggaaa tttcagtcgg agattttgag gaaatttcaa ccgctattga cagatgggct
     1141 cgcgatcgat cgtcaaacgc tcttcaacca tttccatgat gg
//
LOCUS       DASQSL010001615         1137 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_116917, whole genome shotgun sequence.
ACCESSION   DASQSL010001615 DASQSL010000000
VERSION     DASQSL010001615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1137)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1137)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1137
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116917"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..403)
                     /gene="rplC"
                     /locus_tag="VE844_16415"
     CDS             complement(<1..403)
                     /gene="rplC"
                     /locus_tag="VE844_16415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011565114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HZC02872.1"
                     /translation="MATAVFGRKKRMTQVFQDDGTLVGVTVIEVEPNLITAVRTAEED
                     GYTAVQVGFGAARSSRVDKARAGTFAKLDTPLRRYLKELRDVSGEVGESIGVDVFEVG
                     DKVHVSATSKGKGFQGTIKRHGFARGPMSHGS"
     gene            complement(408..719)
                     /gene="rpsJ"
                     /locus_tag="VE844_16420"
     CDS             complement(408..719)
                     /gene="rpsJ"
                     /locus_tag="VE844_16420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011565115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HZC02873.1"
                     /translation="MAVSKIRIKLKAYDHEVIDKTARSIVETAERTGAFVFGPIPLPT
                     KRSSYTVIRGPFKDKDSREHFQLHTHKRLIDIQQPTPRTVDSLQRLDLPAGVNIEIKA
                     T"
     gene            complement(723..>1137)
                     /gene="tuf"
                     /locus_tag="VE844_16425"
     CDS             complement(723..>1137)
                     /gene="tuf"
                     /locus_tag="VE844_16425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014246875.1"
                     /note="EF-Tu; promotes GTP-dependent binding of
                     aminoacyl-tRNA to the A-site of ribosomes during protein
                     biosynthesis; when the tRNA anticodon matches the mRNA
                     codon, GTP hydrolysis results; the inactive EF-Tu-GDP
                     leaves the ribosome and release of GDP is promoted by
                     elongation factor Ts; many prokaryotes have two copies of
                     the gene encoding EF-Tu; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HZC02874.1"
                     /translation="GVEMFNKSMDSAQAGDNIGALLRGVKRDDIERGQVLAKPNTITP
                     HTRFKAEVYVLSKEEGGRHTPFFSNYRPQFYFRTTDVTGEIRLEEGVEMVMPGDNTVM
                     NVELISPIAMDEGLNFAIREGGRTVGAGVVTQIVE"
BASE COUNT          186 a          370 c          302 g          279 t
ORIGIN      
        1 gcgagccgtg actcatcgga cccctggcga aaccgtggcg cttgatagtc ccctggaaac
       61 ccttgccttt agacgtggcg ctaacgtgga ccttgtcgcc cacctcgaag acatccaccc
      121 caatgctctc gcccacctcg ccactcacgt cacgcagctc cttcaggtac ctgcgcaggg
      181 gcgtatcgag tttggcgaac gtgccagccc tggccttgtc gacccggctg gatctggctg
      241 ccccgaagcc gacctgtact gctgtatagc catcctcctc ggcggtgcgg acagccgtga
      301 tcaggttcgg ctcgacctcg attacggtta cgccgacgag cgtgccgtca tcctggaaga
      361 cctgggtcat acgctttttg cgtccgaata ctgcggttgc cataacccta cgtcgccttt
      421 atctctatgt tgacgcctgc gggcaggtcg agccgctgca gcgagtcgac cgtgcgcggc
      481 gtgggctgtt ggatgtctat gagacgcttg tgcgtgtgca gctggaagtg ctccctagag
      541 tccttgtcct tgaaaggacc ccggatcacc gtgtagctgc tgcgcttggt cggcagcggg
      601 atggggccga atacgaaggc ccccgtccgc tccgccgtct cgactatcga gcgggcggtc
      661 ttgtctatga cctcgtggtc gtatgctttt agctttatcc tgatcttcga tacggccaca
      721 ggttactcca cgatctgtgt tacgacgcct gctcctactg tccttcctcc ctctcggatg
      781 gcaaagttca acccctcatc catggctatg ggtgagatca actccacgtt cattaccgtg
      841 ttgtccccag gcatcaccat ctcaactcct tcctctagac ggatctcccc ggtcacatcc
      901 gtcgttcgga agtagaactg cggtcggtag ttagagaaaa acggcgtgtg gcgccctccc
      961 tcttccttgc tcagtacata cacctccgcc ttgaagcgcg tgtggggggt tatggtgttc
     1021 ggcttggcca atacctgccc acgctctatg tcatcgcgct tcactcccct taggagcgct
     1081 cctatgttgt ctcctgcctg cgcactgtcc atgctcttgt tgaacatctc tacacca
//
LOCUS       DASQSL010001616         1787 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_106043, whole genome shotgun sequence.
ACCESSION   DASQSL010001616 DASQSL010000000
VERSION     DASQSL010001616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1787
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106043"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..469
                     /locus_tag="VE844_16430"
     CDS             <1..469
                     /locus_tag="VE844_16430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02875.1"
                     /translation="SIAAYVAAGRGLRVALIDQRDFPRDKSCGDGIGPGVAPLLHKIG
                     LSDILADKIPIEELEIIGPDGTAVRSQVPMLDGKLQSGYVIAREEFDHRLFYAALNAG
                     ATDFSRHKLVGASKREGGNEDVTAKYRELSLRCGSKDTVLNAVFWWEPTDHTQ"
     gene            complement(1317..1415)
                     /locus_tag="VE844_16435"
                     /pseudo
     CDS             complement(1317..1415)
                     /locus_tag="VE844_16435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020460430.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
     gene            1450..1699
                     /locus_tag="VE844_16440"
                     /pseudo
     CDS             1450..1699
                     /locus_tag="VE844_16440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007515084.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
BASE COUNT          416 a          478 c          492 g          401 t
ORIGIN      
        1 ttctatagct gcttacgtgg ccgctgggcg tggtttacga gttgccctta ttgaccagcg
       61 agactttcca agggacaagt cctgcggaga cggaattggc ccaggcgtcg ctccactatt
      121 gcacaaaatt ggacttagtg acatcctggc cgacaaaatt cctatcgagg aactcgaaat
      181 tatcgggccg gacggcacag ctgtacggtc acaggtcccc atgctcgacg gcaagctgca
      241 aagtggatat gttatagctc gagaagagtt tgatcatcga ttgttttatg cggcgctcaa
      301 tgcgggggca actgatttct ccaggcacaa attggttggg gcgtcaaaga gggagggtgg
      361 taatgaagac gtaaccgcca aatatcgcga gctatcgctt cgctgcggca gcaaggatac
      421 cgtactaaat gccgtctttt ggtgggagcc gacggaccat actcagtagt gcggcgcata
      481 ttgtcgatac ccgctcatcc agagcgacat accggtattg caatgcgtgc gtatactgat
      541 ttggccgcta aaatcgacct gcgggttggt attcgatttt caccgagaac tccttcccgg
      601 atacggctgg atcttccctg acggcgaggg aatggctaac attggcatag ggttgccctt
      661 agtcgaagta cgtagacgcg gcttagatat tcgggcccaa ctggagtcat ttgcaaatcg
      721 ctcacgggag cgaggaattc cactcggtag actccgccga caccgctcac accacctctt
      781 agcgcagaca attcctcggc tagcctatga ccgtgcggta ttggtaggtg gcagcgcggc
      841 gatggttaac ccgatgagtg gagaaggtat cgtttatgcg atgacttcag cggtcgaact
      901 ctcgcaaaga ctacctctag atataagcga ttccagtaaa ctcaacacct ctctaattga
      961 ttacgcaaaa tggtaccgag acgcatacca caagcacatg cgtctcaact acgcgataag
     1021 caagattttc gcgcagccaa cgatagccag ccgcattata catctctttc ataaagatcc
     1081 caaaacaatg caaatagcag taatgttgat attcaatacc aacgaagctc attacctcaa
     1141 gtggtggcaa acccgaatgg tgtggagatg cctgcaaacg ctgttctttc gttaaccaca
     1201 accgctcgct tgatggtaat gcgccaggag ctcccctgca cgcggtcact gagctgtacg
     1261 ccggggtctg ttgcgttagc ggcatgcaga catacttaac ggcgcagacg ccttattcag
     1321 atagcaaaag cgagttcagt gaagaccgcc ggaagccgat gcctcgggtc gacatccaca
     1381 ccgagctcgt aacggccgcg gcgaaaattc cggacgtcag tggaaatcaa gatcaggcag
     1441 gcttgatcga tgcgtcgtcg ctcccgtcga gtgtcagcat cgagattcag cttcacagga
     1501 ttccgcttcc ctccgcatct ggttcgctgg tactgcgcta cggcctctat accgaaacgt
     1561 cgagcaactg ctggcggagc gtggcatcac cgtcgaccac gtgactgtct atcggtggat
     1621 gcagcgctcc accccgctga tcgatgcggc acgtccccgc cggcccgctc ctggtgatcg
     1681 ctggttcgtg gacgagacgt agtgcgccat gaggcgccct gttgtgttcc cagcgtagtt
     1741 gggaggaact cggagggagg tttctgggtc tgatggctta cctgagg
//
LOCUS       DASQSL010001617         1955 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_91829, whole genome shotgun sequence.
ACCESSION   DASQSL010001617 DASQSL010000000
VERSION     DASQSL010001617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1955
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91829"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..440)
                     /locus_tag="VE844_16445"
     CDS             complement(<1..440)
                     /locus_tag="VE844_16445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015280198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5/YciO/YrdC/YwlC family protein"
                     /protein_id="HZC02876.1"
                     /translation="MTNWQIKQAARAVARGGVIAYPTEAVFGLGCDPWNSAAIARIMQ
                     LKRRKLSKGLILIAADKAQLEPFIRFPNRAVLERVCSTWPGPVTWVLPACAGIPRGLR
                     GDHQSLAVRVTAHPLARALCTLTGALVSTSANPSDCPPARCVQRV"
     gene            complement(433..951)
                     /gene="purE"
                     /locus_tag="VE844_16450"
     CDS             complement(433..951)
                     /gene="purE"
                     /locus_tag="VE844_16450"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005893452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HZC02877.1"
                     /translation="MDRPFVAVLIGSDSDLAVMGSAFEILERFGIATEVRILSAHRTP
                     EATHAYVREADARGCKVFIAAAGLAAHLAGTVAAITLKPVIGVPMEAGPLNGFDALLS
                     TVQMPGGVPVACMAIGQAGAKNAAWLAAQILALQDPNLAERLRIERAATAESILTKNT
                     ALSERLNREVLD"
     gene            complement(988..>1955)
                     /locus_tag="VE844_16455"
     CDS             complement(988..>1955)
                     /locus_tag="VE844_16455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020504206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="topoisomerase DNA-binding C4 zinc finger
                     domain-containing protein"
                     /protein_id="HZC02878.1"
                     /translation="PPMKMGNHVALTAIRAEQHFTEPPPRYTEATLVKSLEEYGIGRP
                     STYASIISTLQQREYVTIESKRFNPTDVGRIVSRFLTEHFTDYVNYDFTARLEDDLDA
                     ISRGEKEWIPVMEKFWEKFKPLLDTKAETVKRKDVTQQVLEENCPKCGKSLVSRLGRR
                     GRFIGCTGYPECDYTRDLEGKIEPATPPMVEGRNCPECQSPLIIRQGRYGKFIGCSTY
                     PQCRYIEPMDKPVDTGVSCPQCRQGSLLRRKSRRGKAFYSCSTYPNCNYAVWHEPMKG
                     PCPQCGWPILTVRTKKKHGTERVCPQKHCDFAEPYASSEPMSLAS"
BASE COUNT          421 a          563 c          536 g          435 t
ORIGIN      
        1 actctctgga cacaccgcgc cggtggacaa tcactgggat tggcactagt ggataccaag
       61 gcgccagtca aggtacaaag tgcccgggcc agggggtggg ctgttactcg gacagcgagg
      121 ctttgatggt cacctcgcaa ccctctggga ataccggcac aagccggcaa cacccaggtc
      181 acaggaccgg gccaggttga gcatacacgc tcgaggacgg ctcgattggg gaagcgtata
      241 aaaggttcaa gctgagcctt atccgcggca atcaggatca atcctttact tagtttgcgc
      301 cgctttagct gcatgatccg cgcaatggcg gcgctattcc agggatcaca cccgagcccg
      361 aacaccgcct cggtcggata ggcgatcacc ccaccgcgcg cgaccgctcg ggcagcctgt
      421 ttgatctgcc agttagtcaa gaacctctcg gttgaggcgt tcagagagag ccgtattctt
      481 ggttaagatg ctctccgctg tggctgcacg ctcgatgcgt agacgctcgg ccaggtttgg
      541 gtcctgcaac gccaatattt gggcagcaag ccaggccgca ttctttgccc cggcttgacc
      601 gatcgccatg caggccacag gcacaccgcc tggcatctgt acggtggaca acagcgcatc
      661 gaagccatta agcggccctg cctccatcgg cacaccaatt actggtttca aggtaatggc
      721 cgccacggtg cccgcaagat gggccgcaag ccccgccgcc gcaataaaga ccttacaacc
      781 gcgggcatcc gcttccctca cgtaagcgtg ggtggcctcg ggtgtacgat gggccgatag
      841 gatccttacc tccgttgcga tcccaaaccg ctcgaggatc tcgaacgcag atcccatcac
      901 cgccagatcg gaatccgaac ctatgagcac cgccacaaag ggtctatcca ttgtcatccc
      961 tgtctcatcg gtttcatggc tttaaaatta ggaagccaga gacatcggct ctgaagatgc
     1021 atagggttct gcaaaatcac agtgcttttg gggacagact cgttctgtac cgtgcttttt
     1081 ctttgttcta accgtcaaga ttggccaacc gcattgcggg caagggccct tcatcggttc
     1141 atgccagacg gcataattgc agttgggata ggtggagcaa gagtaaaatg ccttgccccg
     1201 acgggacttg cgtctcagga ggcttccctg ccggcactgg ggacagctca cccccgtgtc
     1261 caccggttta tccataggct cgatataacg gcactgggga taggtactgc aaccgatgaa
     1321 tttaccatag cgtccctgcc ggatgataag tggggattgg cattcaggac aatttcttcc
     1381 ctcgaccatc gggggggtgg caggctcgat tttaccctcg agatcccgtg tgtaatcgca
     1441 ctcgggataa cctgtgcagc cgatgaatcg gccccgacgg ccgagccggc tgactaagga
     1501 tttgccgcat ttgggacagt tctcctccag cacctgctgg gtaacatcct tgcgttttac
     1561 ggtctccgcc ttggtatcga gcaagggctt gaatttttcc cagaacttct ccatcaccgg
     1621 gatccattcc ttttcaccac gggagatcgc atcgagatcg tcttctaagc gggccgtgaa
     1681 atcataattt acataatcgg tgaaatgctc ggtcaagaat ctactcacaa tcctacctac
     1741 atcggtagga ttgaagcgtt tgctctcaat tgtcacatat tcgcgttgtt gcagggttga
     1801 gatgatcgag gcataggtcg aaggccggcc gatcccatat tcttctaaag atttcactaa
     1861 cgtggcctca gtatagcgcg gcggcggctc ggtgaagtgc tgctcggccc ggatcgcagt
     1921 aagcgccacg tgattaccca ttttcatggg tggca
//
LOCUS       DASQSL010001618         1536 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_66850, whole genome shotgun sequence.
ACCESSION   DASQSL010001618 DASQSL010000000
VERSION     DASQSL010001618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66850"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(144..1367)
                     /locus_tag="VE844_16460"
     CDS             complement(144..1367)
                     /locus_tag="VE844_16460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019503788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02879.1"
                     /translation="MEPSRGKSICIPFKSEDHYAICVADPEGFRQYLMDLHSRHPELL
                     PAGFEHGFVFHDKTWSIKQRVLTRRLRLIATGQLYQVRPSFLMPYMTARTEMVERGLY
                     LRQWGVPFDALAYLFGRDAMFWYRAEVALGRPSLVGTTIKCPEKLPEHLLADEKHTWL
                     EGHKRYLSTTVAGGCLLGASVTPCASTEALEAAYGEFADEVRALNPAYSPKTVCTDGW
                     EATQNAWQRLFPGICIILCFLHAVLKIGERCVRNLPLRISLVDKAWSVYEAVTRAQFS
                     QRLRRFREWGLKHVTEGPLRDAVLSLCTKGPRFACAYSHPGAHRTSNAVDRLMNYQDR
                     RLYAMGYFHGTLESARLAVRAMALLWNFHPYGTRIRRVFPARRSPFHDLNGFQYHDNW
                     LHNLLIASSMGGQKL"
BASE COUNT          316 a          428 c          470 g          322 t
ORIGIN      
        1 gctcctgcgc agcctgctct atggggcagt tggggcaacg gctttggtcg tctttggatt
       61 cttcgtgggt tatttattgc acgcgcgggc gctgcccttg gcagggactg tggatttttt
      121 ctgactctac cggatttcgt ggttcatagt ttttgccctc ccatggagga agcgatgagc
      181 aggttgtgaa gccaattgtc gtgatattgg aagccgttga ggtcatggaa cggggatcgc
      241 ctggcaggga aaacacggcg tatccgagtc ccatagggat ggaagttcca cagcagggcc
      301 atagcccgca cggccaaccg tgcgctttcc agcgttccat ggaagtagcc cattgcgtac
      361 agccgccggt cctggtaatt catgagccga tccacggcgt tagaggtgcg gtgggcgccc
      421 gggtggctgt aggcacacgc aaagcgcggt cccttagtgc aaagactcag gacggcgtcg
      481 cgcaggggtc cctcggtcac gtgcttcaat ccccattccc gaaaacggcg tagccgctgg
      541 gagaactggg ctcgggtgac tgcctcatac accgaccagg ccttgtccac gagtgagatg
      601 cgtagcggta ggttgcgcac gcagcgctcg ccgatcttga ggaccgcgtg caggaagcac
      661 aagatgatgc agatccccgg aaagagacgc tgccaggcgt tttgcgtcgc ctcccagcca
      721 tccgtgcaga cggtcttggg gctataggcc gggttcagcg cccgcacctc gtcggcaaac
      781 tccccgtagg ccgcctccag cgcttcggtc gaggcgcagg gagtcacgct cgctcccagt
      841 aggcaaccgc ctgccacggt ggtcgacagg tagcgcttgt gcccctccaa ccaggtgtgc
      901 ttctcgtcgg cgaggagatg ctcaggcagc ttctcggggc atttgatggt ggtcccaacc
      961 agggaggggc ggcccaaggc cacctcggcg cgataccaaa acatcgcatc gcgtccgaat
     1021 aggtaggcca gggcatcgaa gggaacaccc cactgccgca gatacagacc gcgctcgacc
     1081 atctcggtcc gggcggtcat gtagggcatc aggaacgatg gacgtacctg atagagttgc
     1141 cccgtggcta taagccgcaa ccggcgtgtc agaacccgct gcttgatgga ccaagtcttg
     1201 tcgtggaaca cgaagccgtg ctcgaaaccc gcaggtaaca gctctggatg ccggctatgg
     1261 agatccatca gatactggcg gaagccctcg ggatcagcga cgcagatcgc atagtggtct
     1321 tcacttttga agggtatgca gatactcttt cctcgggatg gttccatcgc ttgtctccgc
     1381 atgggttgtc tgtccaacgc ccagtataga gccagacatg gaatcatcct attatttgca
     1441 aagtcactaa ccacgaaatc cggtagagtc agaatattgg tatttgatca attaagctga
     1501 aataaaaaag gtattgattt caattacttg gaggtg
//
LOCUS       DASQSL010001619         1151 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_66858, whole genome shotgun sequence.
ACCESSION   DASQSL010001619 DASQSL010000000
VERSION     DASQSL010001619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66858"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            30..470
                     /locus_tag="VE844_16465"
     CDS             30..470
                     /locus_tag="VE844_16465"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZC02880.1"
                     /translation="MNALEKYPQMETQLEQTVQALEGVGQEELDWKPVQHEKVRSIGD
                     IMRHIVQAEDTFINRFVMGQEVQPRTPQTNPTTESLVNDFKSLRGRTLELMRQWQDAD
                     LQKTYTGPRGMQMSLDRILQILVGHEIGHRSQMLLIRRLKNPDR"
     gene            687..>1151
                     /locus_tag="VE844_16470"
     CDS             687..>1151
                     /locus_tag="VE844_16470"
                     /inference="COORDINATES: protein motif:HMM:NF017833.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolysaccharide biosynthesis protein"
                     /protein_id="HZC02881.1"
                     /translation="MHQFDAAIAKPVSVILSEIVDKVPARGLTLRQLLNRLGERGQLI
                     FCMILTIPFLLPVSIPGFSAPFGMLMVLIAVGLTMQRSPWLPNRLMNRRLAVSHLVPL
                     LERGARLFARLERVVQPRLLPLTHRATVGRFNVMLLGLSGLLLMLPLPLPLAN"
BASE COUNT          236 a          343 c          340 g          232 t
ORIGIN      
        1 cgtcccccag atgagagagg aggcatgcta tgaacgcgct ggagaaatac ccgcagatgg
       61 aaacccagct cgagcagacg gttcaagcgc tcgagggggt cggccaggaa gagcttgact
      121 ggaaacctgt gcagcacgag aaggtgcgtt cgatcggcga tatcatgcgg catatcgtgc
      181 aggctgagga taccttcatc aaccgcttcg ttatggggca agaggtccag ccccgcaccc
      241 cgcaaaccaa ccccaccacg gaaagccttg tgaacgattt taaaagcctg cgcggccgca
      301 ccctcgaact catgcggcag tggcaggacg ccgacttaca aaaaacctat accggcccta
      361 gggggatgca gatgagcttg gaccgcatct tgcaaatcct ggtggggcac gagatcgggc
      421 atcggtctca gatgctgctg atccgtcgtt tgaagaaccc ggatcgctag catggagaat
      481 cggggtcccg ggcaggtata cgctgcctaa tgcgcccgtg cgaagagccg gagtctcagg
      541 ttatgcgagg cttccggctc tttttgtgcg gtgacagcgg acccggctct agcagcgatc
      601 gggaggaaaa gcaccggaga gtttctcaat actttcatat ttatgtgtgg atcagcaacg
      661 gccagagtcc acgctactgg agagcaatgc accaattcga tgcagccatc gcgaaaccgg
      721 tctcggtgat cctgtccgag atcgtcgaca aagtcccggc cagaggactc accttacgcc
      781 agctcctcaa ccgcttgggg gagcgcggtc agctgatctt ctgcatgatc ttaacgatcc
      841 ctttcctcct gccagtctcc attcccggtt ttagcgcccc gttcggcatg ttgatggtgc
      901 tcattgccgt cggcctgacg atgcagaggt caccgtggct gccgaaccgc ctgatgaacc
      961 gccgcctggc cgtgtctcac ctggtcccac tgctggaaag gggggcacgt ctgttcgcgc
     1021 gtttggagag ggtcgtgcag ccgcggctgc tccccctgac ccatagggcc accgtcggcc
     1081 gcttcaatgt aatgctcttg gggctctcgg gcctgttgct gatgctgcca ttaccactcc
     1141 cattggccaa c
//
LOCUS       DASQSL010001620         1129 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_171309, whole genome shotgun sequence.
ACCESSION   DASQSL010001620 DASQSL010000000
VERSION     DASQSL010001620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171309"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            216..449
                     /locus_tag="VE844_16475"
     CDS             216..449
                     /locus_tag="VE844_16475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013333187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
                     /protein_id="HZC02882.1"
                     /translation="MSQRTGIVGSWFNGEGGYGFIYPEDGGEAVFVHHTGIAAYAKAK
                     SLKKGARVSYEVARRKMGGLWAKDVCTADSSQA"
     gene            865..1011
                     /locus_tag="VE844_16480"
     CDS             865..1011
                     /locus_tag="VE844_16480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02883.1"
                     /translation="MRQEDKPVAQPEPQGMPTEKSLELADEVYIPDYVMLDFGTSETT
                     STEG"
BASE COUNT          248 a          278 c          344 g          259 t
ORIGIN      
        1 tcagcctggc gcttatttcc ccctcctgtg aagatcagtc cgcctcttct ttatggtcgc
       61 gattatcgtt attagtgagc tactatattt tgtgcttttc gattccttaa tagtttcttc
      121 attaacgttc accgcttgtt aaccggaacc ttaaacatcg tccctatact gcgcttctgc
      181 tgggccagga ctgtaaaggg aggagggttt tggtagtgag ccaaagaacg gggatcgttg
      241 ggagttggtt caacggtgag gggggttacg gcttcatcta cccagaggat gggggcgaag
      301 cggtgttcgt gcatcatacg ggtatagcag cttacgccaa ggcgaagtct ctgaagaagg
      361 gcgcccgggt aagctacgaa gtagctagga ggaagatggg tggcctgtgg gccaaggacg
      421 tctgcacggc ggactctagc caagcttaac tcatagacct tagaagttgg cgaaagtaat
      481 aggctcggga tttatacgta gggtacgtgt tgcgcgcctc ctaccaaaga aaagctgtgc
      541 cgtatggccg atgcgcttgg gcattccggc gttgtagtgt ggttcgcaga aaggaggaag
      601 ccagatagcg tcagtagata ggtctctaac gagttgtggg acgagcttgg ggctcggatg
      661 cgaccatcgc cgctgctcca tgacggtggt gttcaccgag ttgggttgcc acgcccgctg
      721 cctgggctgt gggacagtgg gcccgggatg cccaagcaca aaggatgccc ggcaagctct
      781 cttggtcccg aaactcgcac tcgcattggc aaggtattga ggaggatacg cggttagcaa
      841 cccgagaagg aaggagcacc ccgtatgcgg caagaggaca agcccgttgc ccagcctgag
      901 cctcaaggaa tgcccactga gaagagtcta gagttagcgg acgaggtata catccccgac
      961 tacgtcatgc tcgattttgg cacctccgaa acaactagca ccgaagggta gctgatgctg
     1021 atccgccgga ggtccttacc ggacctccgg cccttttgct gtctgcagta actgggcctc
     1081 tgggcgagag gcgtatcccc gtgaataaat tcaaattctg gttcacagc
//
LOCUS       DASQSL010001621         3235 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_116951, whole genome shotgun sequence.
ACCESSION   DASQSL010001621 DASQSL010000000
VERSION     DASQSL010001621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3235
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116951"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(250..1086)
                     /gene="ruvB"
                     /locus_tag="VE844_16485"
                     /pseudo
     CDS             complement(250..1086)
                     /gene="ruvB"
                     /locus_tag="VE844_16485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013219219.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
     gene            complement(1090..2820)
                     /locus_tag="VE844_16490"
                     /pseudo
     CDS             complement(1090..2820)
                     /locus_tag="VE844_16490"
                     /inference="COORDINATES: protein motif:HMM:NF026240.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LAGLIDADG family homing endonuclease"
     gene            2923..>3235
                     /locus_tag="VE844_16495"
     CDS             2923..>3235
                     /locus_tag="VE844_16495"
                     /inference="COORDINATES: protein motif:HMM:NF025113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02884.1"
                     /translation="MRKKATYRIRNWNKYNKALIKRGSLTFWFDEEAIAAWYEEERTG
                     RRGCPRTYSDVAIQCTLTLRGVYHLPLRGTQGLLESLLDLMGLELHAPDYTTLCRRQG
                     GL"
BASE COUNT          735 a          895 c          954 g          651 t
ORIGIN      
        1 gaaaattcgc taaatcgatg ggtgagttgc gaaagtcggg ttagctcctc ggtctggtcc
       61 gggccgagga gcataccttg atcttcagag gatggcggta atgtaggtgt gccggacgat
      121 agtagcggga agcgagctcg gcaagcgcag gtgccgctgc atcaccaccg ctgcggatcg
      181 cctcgattag ggtccaggag gtctgcggaa aataacgggc cgcattcctc aaatcgaact
      241 cacgttaatt tagaggccct caaacagatc ggattccacc accatcccct tgggcgggac
      301 catcccaaaa tgggaccagg tagcgcgggt tgccatccgg ccgcgcgggg tgcgcatcat
      361 gaagccttgc tggatcagaa acggctcaat cacatcttcg atcgtcccgc gctcctcgcc
      421 gatcgcggcg gcgagactat cgacaccgac tggacccccg tcgaattttt gcaaaatggc
      481 aagcaagagt ttgcggtcca tcatatcgaa gccgtggcta tcgacattta agagatccaa
      541 ggcccggtgc gcaaccatct cggtgatccg tccatcgccg cgcacctcgg catagtcgcg
      601 tgtgcgccgt aacagccggt tggcgatcct gggcgtgccg cgggaacgcc tcgcgatctc
      661 ggtggttcct tgcgcttcga gggctacccc caggatgcgc gccgagcgca tgacgatggc
      721 ggacaagtcc tccgtagtat agaactctag acgctggacg atcccgaagc gatctcggag
      781 cggcgaggtg agaagccccg cccgcgtggt tgcgccgacc agggtgaagg gcggcagatc
      841 gagcttgatc gcccgggcgg cgggtccctc accgatcatg atatccagct gatagtcctc
      901 catcgccgga tagaggacct cctcgaccac cgggcttaaa cggtggatct catcgatgaa
      961 gagcacatcg cgtggttcga gattggtgag aagcgccgcc aagtcacctg ggcgttccag
     1021 tactgggccc gaggtctggc gtagaccaac gccgagttca tgggcgatga tgtgggccag
     1081 ggtcgtattg tgattgaaga aaccgttggc aacaaacgaa tgcgtacccg gcacgcagaa
     1141 atcaaacgtc tccgcctcgc caggttgaag cgaggctacg ctgtcccagt agtaacgcgg
     1201 atcagacaag gcatggagcg tcgccgcagc agggagagca gtcacggcgt cgggtaaaag
     1261 cttcatgtaa cgttcgatct gggtcctcga tagtaatcga tcacctcgca gaacgtgata
     1321 aaacgtttta tgctgtctgt gcgcatgggg gcggctggca ttgaagagtt gagccagtgc
     1381 caggtgcgca tacggaatag cctcactccg gttagggccc cgttgaaagc agtggagcaa
     1441 gttgtgccgt gcctgcttgc gtgagaggcg aaatccaacc cgatcataaa agagggctgc
     1501 gtcgtatccg ccaataaaaa gctgccaata ggtttggcct cgaacaactt tagcggtgcg
     1561 atgtgcgatg atcccaaagt ttgtgaggag gatttgggcc tgccgggcga gtgtttcaga
     1621 tttggaagac caatcgatat aaccctcttc gcgccaggca tgaccatcgg cgtcaaacaa
     1681 accctgtaag aaaccccggg caacacgttc cggaccggcc aggacggagg tgggaataac
     1741 cttatcacca gccagtacag gcttcacgcc cagatgaatc atcaaatgcc catagttctg
     1801 gccgaaacgg atctgcggag ccttctcacc atagtgtcgc acggtggggg tccaagcaaa
     1861 ctggcggcgg caaattcgga taatttcgtc ttggatctcc ggctcactca ccgtgatcgt
     1921 aaaagccggt gtcccacgtt cgaaatggcc gtcgccgacc aatagaccca tcagataggc
     1981 taaatcctcg tcaagcacgt ctgggatctg ccaaggggtg tgctgtggag gcaaatcaga
     2041 taagtttgcg acctctcggc ccggcagttt tcgctcaccc attaaaggca accccagccg
     2101 ctgagctgcc tgtcgaggtg caggattatg ggctatcttg ccagcgtaag ccatttccag
     2161 ttcaggcgca gatggaaagc aattcaacgc cgccatcaac gcctgataag caacgagcac
     2221 acgttcctcg gttcgggtcc ggcggctggc gttatctaaa taagcaggct ggaaagtaat
     2281 ggcctgggct tcaccccaaa cttgcgtccc gcgcgcgatc gcaacgaaat caccttccgc
     2341 taacttactc agcggcttcc actgagggcc ctccggggtg gctaccaaaa cggggtgatt
     2401 gggggtgccc tccaactcaa agcctgagcg agtgcggagt cgaaccgttg gcccacggcc
     2461 gcttgcataa atatgcgaag ccggttccac gccttcccgt ccacaaactt gcacctggca
     2521 aggtgtgtaa tcaccagcgc ctaaattggg tgggataagt tgccggaact ctaccaaccc
     2581 cttatcagtc aacaccaggc tatccgccgt aatacacttg ccaagccccg gtggcccaaa
     2641 gatcagcacg tggtccaagg cctcgttgcg cttgcgcgcc gcccggatga agatctccaa
     2701 ctgctcgcgc actgttgcct ggccgatata atcatgtagg cgtttgggac gtatcacctg
     2761 ttccacagcc ggatcatctc cgcttggatc aggaaggatc agtgaattaa aggggttcat
     2821 gccaaactat acaatatatt aagggtttct tcaggcgttg ttgcataaat gctcatccat
     2881 ccccagttat tgagtaggcc aatagcaaag agtgacgagt cgatgaggaa gaaagccacc
     2941 taccggatcc gcaactggaa caagtataac aaggcgctga taaagcgggg tagtttgacg
     3001 ttttggtttg acgaggaggc aatcgccgcc tggtatgaag aggaacgcac agggcggcga
     3061 ggctgtccgc gcacgtattc ggatgtagcc attcaatgta cactgacgtt gcggggggtg
     3121 tatcacttgc cgttgcgagg gacacagggc cttctggagt cgttactcga tctgatgggc
     3181 ctggagctgc acgcgccgga ttacacgacg ctgtgtcgtc ggcaaggggg cttgg
//
LOCUS       DASQSL010001622         1363 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_66883, whole genome shotgun sequence.
ACCESSION   DASQSL010001622 DASQSL010000000
VERSION     DASQSL010001622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1363
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66883"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..518
                     /locus_tag="VE844_16500"
     CDS             <1..518
                     /locus_tag="VE844_16500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004892910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UDP binding domain-containing protein"
                     /protein_id="HZC02885.1"
                     /translation="CIGVDPYYLTHKAQILGYIPKVILAGRSINDGMGSYISGQVVKQ
                     LIHAGYPVKGSRVTVLGLTFKENVPDLRNSRVIDIVRELMEYAVQVQVHDPLAETYEA
                     MEEYGIALIPEDQLQPADAVILAVPHRHYLAKGWACVTSLLKDGRGVVVDVKAKLPRE
                     RIPDGVRLWRL"
     gene            541..>1363
                     /locus_tag="VE844_16505"
     CDS             541..>1363
                     /locus_tag="VE844_16505"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009021932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HZC02886.1"
                     /translation="MNVTLIGTGYVGLVSGACFAEFGANVTCVDVDEEKIARLNKGEI
                     PIYEPGLEALIARNVEQGRLRFTTEFAMPVGEADLVFIAVGTPSRRGDGFADLSYVYE
                     AARKIAPHLKGYTVIVDKSTVPVGTARNVARIIRKENPLADFDVASNPEFLREGAAIA
                     DFMRPDRVVIGVESERAETLLRNLYRPLNLIEAPILKTGLESAELIKYAANAFLATKI
                     SFINEISVLCETVGADVHAVAKGMGLDGRIGRKFLHPGPGYGGSCFPKDTQALVRI"
BASE COUNT          292 a          357 c          410 g          304 t
ORIGIN      
        1 attgtatcgg ggtggacccc tattacctga cccacaaggc gcagatcctg ggctatatcc
       61 ccaaggtgat cctggccggc cgcagtatca acgatggcat gggaagctat atcagtgggc
      121 aggtcgtcaa gcagttgatc catgccggct atccggtaaa gggaagcagg gtcaccgtcc
      181 ttggattgac cttcaaggag aatgtgccgg atctgcgcaa tagccgggtg atcgatatcg
      241 tgcgcgaatt gatggagtac gcggtgcagg tccaggttca tgatcccttg gccgagacct
      301 acgaagctat ggaagaatac ggtattgccc ttatccccga agatcaattg cagcctgccg
      361 acgccgtgat tctggccgtg cctcaccgcc attacctggc caagggctgg gcctgtgtta
      421 catctttgct taaagatggg cgcggggtcg tggtcgatgt caaggctaaa ttgcctcgcg
      481 agcgcatacc cgacggcgtg cgcctgtggc ggctgtaagt atacatagag atgcctaata
      541 atgaatgtga ccctaattgg caccggttat gtgggactcg tatccggggc ctgttttgct
      601 gagtttgggg caaatgtgac gtgtgtcgat gtcgatgagg aaaagatcgc ccgcctcaac
      661 aaaggggaga tcccgatcta tgaacccggt ctagaagcac tgatagctag gaatgtcgaa
      721 cagggccgac tgcgatttac caccgaattt gctatgccgg taggcgaggc tgacttggtg
      781 tttatcgccg tgggtactcc ttccaggcgc ggcgatggct ttgccgatct gagctatgtc
      841 tatgaggcag ccaggaagat cgccccccat cttaagggct ataccgtcat tgtggataaa
      901 tccacggtgc cggtagggac agcccgcaat gtggcgcgga tcatccgcaa agagaaccct
      961 ctagcggatt ttgatgtggc ctccaacccg gagtttctgc gggagggcgc agcgatcgca
     1021 gattttatgc gcccagatcg cgtagtcatc ggggtggaga gcgagcgggc cgagaccctt
     1081 ttgcgcaatc tgtaccggcc ccttaatctc attgaggcac cgatcctcaa gaccggcctg
     1141 gaaagcgcag agttgatcaa atacgccgcc aatgcctttc tcgctaccaa gatcagtttt
     1201 atcaatgaga tatccgtact gtgcgagacg gtgggcgcgg atgtgcacgc ggtcgccaag
     1261 ggcatgggtc tcgatggccg cattggacgg aaattcctcc atcccggtcc aggctatggt
     1321 ggctcctgtt ttccaaaaga cacccaggcc ctggtccgga tcg
//
LOCUS       DASQSL010001623         1483 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_116966, whole genome shotgun sequence.
ACCESSION   DASQSL010001623 DASQSL010000000
VERSION     DASQSL010001623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1483
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116966"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..1323
                     /locus_tag="VE844_16510"
     CDS             133..1323
                     /locus_tag="VE844_16510"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02887.1"
                     /translation="MSQRYPEINSLPFSQQVRSTLLSILLPHLPLGIVGRNLDDALAY
                     DILCYASVKRISIESACQTLAEAPSGNTVREHVTAALIPDREGMGGLEAQLNQTLQAQ
                     LPRPVRRRLQRCPYEVACDLVEIPYHGEAQTDEAEVRRGAAKVGTTHFHMYATLAIVH
                     HQHRFTLALTLVWAGETMEQVLDRLLDQARCLGLRIKCAYLDKGFCSVAVLRLLRQRR
                     VPYIVPIPQRGGKNGIKQLCCGRQSYRTRYTFKRTTPQPYTTEVVIVCKYSRGRYHQP
                     GVRYFAYAIYGIGMLNPRQVFEHYRRRFSIESGYRQLHQVRARTASRHPGLRLLLVGL
                     ALMIVNLWVILSHAWVTITRYGRRLRIISLKLEQVADALREQLRQLLGVISVLQIRAV
                     RQAA"
BASE COUNT          288 a          426 c          435 g          334 t
ORIGIN      
        1 tatccggccc accgcgttgc tcgaaaagcc agtatcagta gatcacgaaa tgaagtatga
       61 gcaggtataa ggggagcgcc gacttgtgcg acgatctcgg ttagcaaatt gaagaccgag
      121 aggaggttgc atatgagtca gcgctatcct gagattaaca gtctgccgtt ttcccagcaa
      181 gttcgctcca cgctccttag cattttgtta ccgcacctgc cattgggcat tgtcggacgt
      241 aatctcgacg atgccctggc gtatgacatt ctctgctatg cttcggtcaa gcgcatctcg
      301 attgaaagtg cgtgtcagac gctggccgaa gcgccctccg gcaataccgt gcgcgagcat
      361 gtgacagccg cgctgatacc ggaccgtgag gggatgggag ggttggaggc ccaactcaac
      421 cagacgctcc aggcacaact gccccggcct gtgcggcggc ggcttcagcg ttgcccctat
      481 gaggtcgcct gcgatctggt tgagatcccc tatcatggtg aggcccaaac cgatgaggcc
      541 gaagtccggc gcggcgcggc aaaagtcggc acgacccatt ttcacatgta tgcgacgctg
      601 gcgatcgttc atcatcagca ccgtttcacg ctcgcgctga ccttggtctg ggctggcgag
      661 acgatggagc aggtgctcga ccgactgctg gatcaggcac gctgtctggg cctacggatc
      721 aaatgcgcct acctcgataa aggtttctgc tcggtggcgg tgttgcggct gctgaggcag
      781 cggcgcgtgc cctatatcgt gccgatccct cagcgcggtg gcaaaaatgg catcaagcag
      841 ttgtgttgcg ggcggcagag ttatcgcacg cgctacacgt tcaaacgcac taccccgcag
      901 ccctacacca ctgaggtggt gattgtttgc aaatacagtc gcggccgcta ccaccagccc
      961 ggcgtgcgtt acttcgccta tgccatctat ggcatcggca tgctcaatcc gcgccaggtc
     1021 tttgagcatt accgccggcg cttcagtatc gagagtggct atcgccaatt gcatcaggtg
     1081 cgtgcccgta ccgcctcccg tcatccggga ctccgcctgc tgctagtcgg cctcgcgttg
     1141 atgatcgtca atctctgggt cattctctct catgcctggg tgacaatcac ccgttatggc
     1201 aggcgcctcc ggatcattag cttgaagctc gaacaagtcg ccgatgcctt gcgtgagcaa
     1261 ctgcggcaat tactcggtgt tatctcagta ttacagatca gagctgtacg tcaagcagct
     1321 taactatttt cgtgatctac tgaatgtaca ctgacgttgc ggggggtgta tcacttgccg
     1381 ttgcgaggga cacagggcct tctggagtcg ttactcgatc tgatgggcct ggagctgcac
     1441 gcgccggatt acacgacgct gtgtcgtcgg caagggggct tgg
//
LOCUS       DASQSL010001624         1159 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_91855, whole genome shotgun sequence.
ACCESSION   DASQSL010001624 DASQSL010000000
VERSION     DASQSL010001624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1159
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91855"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(114..1055)
                     /locus_tag="VE844_16515"
     CDS             complement(114..1055)
                     /locus_tag="VE844_16515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02888.1"
                     /translation="MDSEFLDWALAEFSGYVAADELYDGPFCILSAVANRRYKRILYE
                     VLEHDPNHDDIRVFLGRLKSALQARDLTLRGITTDGSALYREPLAEIFSGVAHQVCQF
                     HVIKELTKEVLQAVAQERERLARSKSKLKRGRPSSKDKAARRAARNSKAIQEKISDLF
                     QDRYLFVKRRLKPSERKGLRFITRGLAQWRKLRKLMEQVYALCDRRCRTQTALDKLTT
                     LRRRLSRFKHLGETLKKLYSLTLEKALTFLDDKLLPSTSNAVERGNRRYRKMQKSIDS
                     VRPHEQIRARIALAMWREAQGEGRQQTLQALHEARAG"
BASE COUNT          239 a          329 c          326 g          265 t
ORIGIN      
        1 acctttatgg gatcaggcaa cccaatctgt caatttagag tctttaactc caagacagaa
       61 ttgtcaggaa atagcaaaaa tgacgagact atagcaatga tgccgggctg ttttcatcct
      121 gccctcgcct catgtaaggc ttggagagtc tgttgccgcc cttcgccttg ggcctctcgc
      181 cacatggcga gcgcaattcg tgcccggatc tgctcgtgag ggcgcacact gtcgatactc
      241 ttttgcatct tgcgataacg tcgattaccc cgttccaccg catttgacgt ggaggggagc
      301 agtttgtcat cgagaaacgt tagggctttc tccagggtta gcgaatagag cttcttcaag
      361 gtctcgccca gatgcttgaa gcggctcagg cgccgcctca gcgtcgtgag tttgtcgagc
      421 gccgtctgag tgcggcagcg gcgatcgcac aaggcataga cctgctccat gagcttacgc
      481 aacttgcgcc actgcgctaa gcctcgggtg atgaaccgga gtcctttgcg ttcgcttggc
      541 ttcaggcgac gcttgacaaa caagtagcga tcttggaata aatcgctgat tttctcttgg
      601 atggctttgc tgtttcgggc ggcgcggcgc gcagctttgt ctttcgacga cggtcggccg
      661 cgctttaact tggacttcga ccgggctaaa cgctcccgtt cttgggccac ggcttgcaag
      721 acctctttgg tgagctcctt gatgacgtga aactggcaga cttggtgcgc caccccacta
      781 aaaatctcgg cgagcggttc gcgatagaga gcggagccat ccgtggtgat gccccgcagc
      841 gtcaagtcac gcgcttgcaa ggcgcttttg agccgaccca aaaagacccg gatgtcatcg
      901 tggttgggat cgtgctctaa gacctcatag aggatgcgct tgtaacggcg attagccacg
      961 gcggacagaa tacagaaggg gccatcgtag agttcatcgg ccgccacata gcctgaaaac
     1021 tcagccagag cccagtcgag aaactcgctg tccatgcgct cgcacgcctt tttttccccc
     1081 agcctccacc cagtttggga tcgtggcaaa gggcacgaac acccggtggt cgcgccacag
     1141 gtgccaactc gctggacga
//
LOCUS       DASQSL010001625         1083 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_79430, whole genome shotgun sequence.
ACCESSION   DASQSL010001625 DASQSL010000000
VERSION     DASQSL010001625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79430"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..552)
                     /locus_tag="VE844_16520"
     CDS             complement(<1..552)
                     /locus_tag="VE844_16520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007219897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HZC02889.1"
                     /translation="MTGFTDQIAVVTGASSGVGRAIASALAAKGAVLCLVGRHEKTLE
                     AVAESMRATASDVLCCRADLTLDRDIRELTAQLQRFFGHIDVLIHSAGVIALGPLEAE
                     PVGDLDWQYGINVRAPYVLTQALLPLLRPRQGQIVFLNSSVGLNARANVGQYAATKHA
                     LKAIADSLRDEVNAEGLRVLSVFL"
     gene            complement(569..>1083)
                     /locus_tag="VE844_16525"
     CDS             complement(569..>1083)
                     /locus_tag="VE844_16525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017744960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4910 domain-containing protein"
                     /protein_id="HZC02890.1"
                     /translation="DAEIDKAVAHVLKHSGQDYEVMDFSPYGYDERQFCSPGFNLPVG
                     CFMRTPHGRFPEYHTSADNLDFVRAECLADSFSKCCSVLRVLESNRRYLNQNPKAEPQ
                     LGKRGLYRAIGGQAEGRVHELAMLWVLNFSDGGHTLLDIAERSGLEFSVIQHAADALA
                     RHDLLKESPK"
BASE COUNT          217 a          327 c          316 g          223 t
ORIGIN      
        1 caggaacacg ctcagaacgc ggagtccctc ggcgttcacc tcgtcgcgta ggctatcggc
       61 gatcgctttg agggcgtgct tggtcgcggc atattgcccc acattggctc tggcattcag
      121 ccctacactg gaattcagaa agacgatctg cccttgtcgt ggtctgagca gcgggagcaa
      181 cgcttgggtg aggacataag gcgcgcgaac gttgatccca tactgccagt cgaggtctcc
      241 gacgggctca gcctcgagtg gaccgagggc gataacgccc gcactgtgga tgagcacatc
      301 gatatgtcca aaaaatcttt ggagctgtgc cgtcaactcc cggatgtctc gatccagcgt
      361 caaatcagcc cggcagcaca gcacgtcgga ggcggtcgcc cgcatacttt cggccaccgc
      421 ctccagtgtc ttctcgtggc gccctacgag gcagaggacg gcgcccttgg ccgcgagcgc
      481 cgaggcaatg gccctgccaa ccccgctact cgccccggtt accaccgcga tctggtctgt
      541 gaaccctgtc atgacgaacg ttcagtcgct atttggggga ctctttcaag agatcatgcc
      601 gcgccaacgc gtctgctgcg tgttggatga cgctaaattc cagacccgag cgctccgcga
      661 tgtctaacag cgtgtgaccg ccgtcggaga agttcagcac ccacaacatg gccagttcgt
      721 ggactctgcc ctcggcttga ccgccgatgg ctcggtagag tcctcgttta cccaactgcg
      781 gttcggcctt agggttttga ttcaggtagc gcctattgct ctccagcaca cgcaacactg
      841 agcagcattt cgagaatgag tccgcaaggc attcagctcg aacgaaatcc aaattatctg
      901 cggacgtgtg atactcgggg aaacgcccgt gaggcgttct catgaagcac ccgacgggga
      961 ggttgaatcc gggggagcaa aattgccgtt cgtcgtaacc gtaaggggag aagtccatga
     1021 cctcataatc ttgcccggag tgcttgagca cgtgggcgac ggccttgtcg atctctgcat
     1081 cgc
//
LOCUS       DASQSL010001626         1156 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_91861, whole genome shotgun sequence.
ACCESSION   DASQSL010001626 DASQSL010000000
VERSION     DASQSL010001626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1156
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91861"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            490..930
                     /locus_tag="VE844_16530"
     CDS             490..930
                     /locus_tag="VE844_16530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015092205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZC02891.1"
                     /translation="MNPLMTIMLALALTAPACGGTMEDQNKTLVREFCDVAFHQHQPR
                     EAANKYLGSHYRQHNPHAPDGAEAFAEYFEGFFTAHPTFRFDIQRMIAEGDLVVLHVH
                     TTLDAQDRGKAVVDIFRVDQGKIVEHWDVIQDVPERSANRNTMF"
BASE COUNT          252 a          320 c          331 g          253 t
ORIGIN      
        1 tacgcggtca ctctgcttcc catggaacag gtggtataaa aagaccataa acctttcgtt
       61 ttctaagaca ggggaagcga tcaccggggg agtcggggac catggaacgc cagcagacca
      121 tcaatgaagg aacaagacag gtgaggacgt tgtgccgcgg ggatttgcgg ggaagcccat
      181 cacctgtttc cttcaccgag aatggcacag acccaacatc ctttacaccg gtgtgcaccc
      241 cttgccgcgc atgccatata atacgcgctc atcgtgcatc gtggagtgct atggtggggc
      301 atcgtgctga tggcatgaga tgggtgctgg tgtgtccgcg aatcgtgtcc acggatttga
      361 acggtttcat ctgcaaaatt tgatttcctt ccctgataca ccgtgcgtac aatggccccg
      421 cacatctgtg tatgcaggaa gcttcgacga cgcgcggggt cgagcgtctc accacagaaa
      481 gagagcacga tgaacccact catgaccatc atgctggctc tcgcgttgac ggccccagcg
      541 tgtgggggaa caatggaaga ccagaataaa acactcgtgc gtgagttttg tgacgtagcc
      601 tttcatcagc atcagccccg agaggctgcg aacaaatatc ttgggagcca ctatcgtcag
      661 cacaaccccc atgcgcccga tggggctgag gcctttgccg aatactttga gggctttttc
      721 accgcgcatc ccacctttcg attcgacatt cagcgcatga tcgcagaggg tgatctggtg
      781 gtcctgcatg tccatacgac gcttgatgca caggatcgag gcaaagccgt cgtggatatt
      841 tttcgggtcg atcaggggaa aatcgtggag cattgggatg tcattcaaga cgtgccagag
      901 cggtccgcca accgcaatac catgttttaa cggagaagag cggtcgcctc gcaggccgct
      961 ggggtgtgcc gcatgtctcg ccgctgatgt gaccggtggg cgtggtctct gacgtcccct
     1021 gcgcgtgcac catccatcca tgccttggga ggtgttgcca tgaatcacca gcctgattcg
     1081 aaagccggcc ttgaggcctt gctcacgccc gacaattgcg cgctgattct catcgaccat
     1141 cagccgttcc aggtcg
//
LOCUS       DASQSL010001627         3663 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_25876, whole genome shotgun sequence.
ACCESSION   DASQSL010001627 DASQSL010000000
VERSION     DASQSL010001627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3663
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25876"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1140)
                     /locus_tag="VE844_16535"
     CDS             complement(<1..1140)
                     /locus_tag="VE844_16535"
                     /inference="COORDINATES: protein motif:HMM:NF026092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching N-terminal
                     domain-containing protein"
                     /protein_id="HZC02892.1"
                     /translation="MIPESIRLGNEFYVLASALAPRRPQVLLNHEDSFAIFDVAGDIP
                     LAVLEAYGLFHQGTRFLNRFDLRLNGTFPILLSTIPSSEGSELMTYLSNADEMHEGEI
                     ILPRDTVSVQRCKTLFGGVLYERLQLHHFGQQPLKLELVILFGADFADIFELRGTGRN
                     GHGEVLGPLIEPNCIRLPYRGLDSVHRETVLVFSQAPDQLDAKSARFQFDLEPGQEAS
                     LQIRVECHVGERGARARDFGSALAAIREERSEWCQLFPALHSDNSDFNTWLNRSLQDL
                     ALLRTQTEGKSYVYAGIPWFATVFGRDGLITALETLAFMPELAAGTLRTLAALQGQEY
                     NAERDEEPGKILHEMRHGEMAATDEIPFGRYYGSVDATPLFLMLLA"
     gene            complement(1137..2237)
                     /locus_tag="VE844_16540"
     CDS             complement(1137..2237)
                     /locus_tag="VE844_16540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014429429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HZC02893.1"
                     /translation="MRIAQIAPLYERVPPKLYGGTERVVSYLTEELVRLGHEVVLFAS
                     GDSITKAELRAPCSQALRLDPQCFDSLAPHVRMLGWVYQQSHEFDIIHCHTDYLGLPL
                     SQFTTTPTVITLHGRLDIPGISPLYYEYPEVALISISDAQRRPLPEAHWVATVHHGLP
                     LDLYDFAPQAGDYLLFLGRISPEKQPDAAIRVACRAGVPLRIAAKVDKVDREYFETTI
                     RPLLDHPLIEFIGEVDEEGKHELLRHALALIFPIDWPEPFGLVMIEALACGTPVIARP
                     RGSVPEVLEEGVTGLLCETEDEMVAAVQHVATLNRARCRREFERRFTATVMARRYLNI
                     YRTLTQQRSIDRTLARLSLIGPEPSADIALEP"
     gene            complement(2280..3590)
                     /locus_tag="VE844_16545"
     CDS             complement(2280..3590)
                     /locus_tag="VE844_16545"
                     /inference="COORDINATES: protein motif:HMM:TIGR00765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhjD/YihY/BrkB family envelope integrity
                     protein"
                     /protein_id="HZC02894.1"
                     /translation="MTHPKAHAFASWVADFLKVHFARWWAVALERFEADQLGLRAMGL
                     TYTTLLSLVPFLAVTFSVLKAFGVQNQIEPVLARALEPIGPGGVEITSRIIEFVDKLE
                     LGGLGAAGVAGLFYTTISLISQIEDSLNHIWRARRPRSFGQKFSDYLSVVLVGPVLVF
                     TALALIASAQSHWLMQAILAIKPLGFFVPMVTRIMPLVLLCAVFTFVYRFIPHTQVRF
                     SSALLGGVVAGVLWQLIGIAFAALVASSTQYEAIYSSFAVLILFLLWIHTGWLILLAG
                     GEVAYLHQHRAVRLAGVSYSEPSHVLRERLGILMLVEITRRYLACEPPWRAPALAIAL
                     GAPLYLLEELIDGLVQRGVLLRTTEPEGIALGCPPEQLSVSEIIELLGAPLTMETVDA
                     GQDPVTRLLQRRDEAVRQATQGITLRSLAAETEGVSWAPMSSAR"
BASE COUNT          827 a         1103 c         1089 g          644 t
ORIGIN      
        1 ggctaacagc atgagaaaga gcggcgtggc gtccacgcta ccgtagtagc ggccgaaggg
       61 gatctcatcg gtggcggcca tctcgccgtg acgcatctcg tggaggatct tgccaggctc
      121 ttcgtcgcgc tcggcgttat actcctgacc ttgcaaagct gccaaggtgc gcagggtacc
      181 ggccgccagc tcaggcatga aggccagcgt ctcgagcgca gtgatcagcc catcgcgccc
      241 gaagaccgtg gcgaaccagg ggatgcccgc atatacatag gacttgccct cggtctgggt
      301 ccgtaacaag gcaaggtctt gcaatgagcg gttgagccag gtattgaagt cgctgttgtc
      361 cgaatgcagc gcagggaaca actggcacca ctcactgcgc tcctcgcgga tagccgccag
      421 cgccgagccg aagtctcgag cccgagcacc cctctcgccc acatgacact cgacccggat
      481 ctgtaaactg gcctcctgcc ccggctcaag gtcgaactgg aagcgggcgc tcttcgcgtc
      541 gagctggtcg ggcgcctggg agaacaccag aactgtttcg cggtggacac tatctagccc
      601 acggtaggga aggcggatgc agttgggctc aatgaggggc ccgagcacct cgccgtggcc
      661 gttccgtccg gtcccacgga gctcgaagat atcggcgaag tccgctccga acaagatcac
      721 caattccagc ttgagcggct gttgcccgaa gtggtgcagc tgcaggcgct cgtagagcac
      781 accgccgaac aaggtcttgc atcgctgcac cgagaccgta tcgcggggca ggatgatctc
      841 accttcatgc atctcgtcgg cattggatag gtaagtcatg agctcgctcc cctcggacga
      901 agggatggtg ctgagcagga tcggaaaggt cccattcaag cgcagatcga agcggttgag
      961 aaagcgcgtc ccttgatgga ataaaccata ggcctcgaga acggccaaag ggatatcgcc
     1021 tgccacatcg aagatggcaa agctgtcctc gtgattgagc agcacctggg gccgccgtgg
     1081 cgccagggct gaggccagca cgtaaaattc attacccaga cgaatcgatt cggggatcac
     1141 ggttcgagcg cgatatcggc cgagggttcg ggtccgatca gtgacagccg cgccagggtc
     1201 ctatcgatac tgcgctgttg cgtcagtgtc cgatagatgt tcaggtagcg ccgtgccatg
     1261 acggtcgccg tgaagcggcg ctcgaactcc cgccgacagc gggcccgatt gagcgtagcg
     1321 acgtgctgaa ccgccgccac catctcatcc tcggtctcgc acaatagccc cgtgaccccc
     1381 tcctccagca cctcaggtac cgagccgcgc gggcgtgcaa tgaccggcgt accgcaggcc
     1441 aaggcctcga tcatcaccaa tccaaaaggc tccggccaat cgatgggaaa aatcaaggcc
     1501 agggcgtggc gcagtaactc gtgcttgccc tcttcgtcga cctcgccgat gaactcgatg
     1561 aggggatggt cgaggagggg gcggatggtg gtctcgaaat actcgcggtc gaccttgtcg
     1621 accttggcgg cgatacgcaa gggcactccg gcccggcagg cgacgcggat ggcggcatcc
     1681 ggctgctttt ccggtgagat ccggccgagg aacaaaagat agtcgcccgc ttgcggcgcg
     1741 aagtcataga gatcgagggg caacccatgg tggactgtag cgacccaatg agcctcgggc
     1801 aaaggccgtc gctgggcatc gctgatcgag atcaaggcga cctccggata ctcgtagtac
     1861 agcgggctga tacccgggat atccaagcgg ccatgcaggg tgatgacggt cggtgtcgtg
     1921 gtaaactgcg agagcggtag gccgagatag tcggtatgac aatgaatgat atcaaactca
     1981 tggctctgct ggtacaccca acccagcatg cgtacgtgcg gggccaagga gtcaaaacac
     2041 tggggatcga gccgcagcgc ctgggagcag ggcgcgcgca gttcagcctt ggtaatcgaa
     2101 tccccgcttg caaacagaac gacctcatgg ccaagccgca ccagctcttc agtcagatag
     2161 gagacgaccc gctcagtccc gccatagagc ttggggggca cacgttcgta caacggggcg
     2221 atctgggcga tgcgcatagt tatatagact cgtgcttttg cgttttgttt caaaggcctc
     2281 tatcgagccg atgacatcgg tgcccagctc acgccctcgg tctcggccgc taacgatctt
     2341 aaggtgatgc cttgggtcgc ctggcgaaca gcctcatccc ggcgctgcaa gagcctggtg
     2401 acgggatcct gtccggcatc gacggtttcc atggttagcg gtgccccgag cagctcgatg
     2461 atctcactca cagagagttg ctctggagga caacccagag cgatcccttc gggctcggta
     2521 gtacggagca ggaccccacg ctgcaccaag ccatcgatca actcctccaa gaggtacagc
     2581 ggcgcaccga gcgctatggc aagcgccggc gctcgccagg gcggctcgca cgcaagatag
     2641 cgccgggtga tctcaactaa catcagaata cccagccgtt cccggagaac atggcttggt
     2701 tccgagtagg atacgcccgc aaggcggaca gcgcggtgtt ggtgaaggta ggcgacctca
     2761 cctccagcca aaaggatgag ccatcccgtg tgaatccata agagaaacag tatcaacacg
     2821 gcaaaactcg aataaatcgc ctcatactgt gtcgagctgg ccacaagcgc cgcgaacgcg
     2881 atcccgatca attgccagag cacccctgcc acgactccac cgagcagcgc tgagctaaaa
     2941 cgcacctgcg tatggggaat gaacctgtat acaaacgtaa ataccgcgca cagcaacacg
     3001 agaggcatta tccgcgtgac catgggcaca aaaaaaccca gcggtttgat cgcgaggatc
     3061 gcctgcataa gccaatggct ttgggctgaa gcgatcaagg cgagggctgt gaacaccaag
     3121 accggcccga ccagtaccac gctcagataa tcgctgaatt tttggccgaa gctccgcggc
     3181 cgtcgcgctc gccagatatg gtttaggcta tcctctatct ggcttatgag cgagatggtc
     3241 gtatagaaaa ggcccgccac gcctgcggct ccaagcccgc cgagctcaag cttatcgacg
     3301 aactcgatga tccttgaggt gatctcgacc ccaccgggcc caatgggctc aagtgcgcgc
     3361 gcgagtaccg gctcaatctg attctgaaca ccaaatgcct tcagtaccga gaatgtgacc
     3421 gcgagaaaag gcaccagcga gagaagtgtg gtataggtca gacccatcgc ccgcagaccg
     3481 agctgatctg cctcaaacct ttccagcgcc acggcccacc agcgagcgaa atggacctta
     3541 agaaagtcag ctacccatga agcaaaagca tgtgccttgg ggtgagtcat cccgcatctt
     3601 tccaatttct atgcatcaaa cccgaatgac tgcggcattg taccccaaaa ccccttaaaa
     3661 cca
//
LOCUS       DASQSL010001628         1301 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_116976, whole genome shotgun sequence.
ACCESSION   DASQSL010001628 DASQSL010000000
VERSION     DASQSL010001628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1301
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116976"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..305
                     /locus_tag="VE844_16550"
     CDS             <1..305
                     /locus_tag="VE844_16550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014182156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02895.1"
                     /translation="AGLGYQIAPSTVWSILRRAGVDPAPHRNGPTWRQFLAGQAHGIL
                     ATDFFCVDTLLFHRLYVLEGSRFRRQSPKWHDGLRGEEQKWDRHAGSSLLSIRLKL"
     gene            308..544
                     /locus_tag="VE844_16555"
     CDS             308..544
                     /locus_tag="VE844_16555"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02896.1"
                     /translation="MAINSGRPIAEIARDLGINEGTLGNWVKVAKSRGEVKEKPLDID
                     ERARLKELEEEVRRLKMEREVLKKAAAWFAKESI"
     gene            520..>1301
                     /locus_tag="VE844_16560"
     CDS             520..>1301
                     /locus_tag="VE844_16560"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZC02897.1"
                     /translation="MVCEREHIKFAFICDLDEEERRKPRKERIPVSLMCEVLDVSRGG
                     FYAWLTRAKPDREKEDDELTVVIKKIHDDHEGRLGVDRLVAELAKLGRRHSPHRVRRL
                     VRAAGLSCVHPRPYRATTVRDEANPEGLVDLVGREFVPQGPNQLWFTDITYIRTWNGW
                     AYLVSILDGYTRKVVGWSAGGHMRTSLVTDALAMAITRQRPGIGDVVIHSDRGSQYTS
                     RSFRDMALANGIIPSVGHTGICFDNAMAESFNATIKKELIHL"
BASE COUNT          284 a          360 c          407 g          250 t
ORIGIN      
        1 tcgccgggct cggctaccag atcgcgccca gcaccgtgtg gtcgatcctc aggcgagccg
       61 gcgtcgaccc tgcacctcac cgcaacgggc ccacctggcg acagttcctg gctggccaag
      121 cccacggtat tctcgccacc gacttcttct gcgtcgacac cctgctgttt caccgcttgt
      181 acgtcttgga gggctcccgc ttccgtagac agtcaccgaa gtggcacgat ggtctacgag
      241 gagaagagca gaagtgggat cgacacgccg gaagttcact gctgagtata aggctgaagc
      301 tgtagagttg gcgatcaact cgggacggcc tatagcggaa attgcccgag acctcggaat
      361 caacgaagga acactgggta attgggtgaa agtggcgaag agtcgcggtg aggtcaagga
      421 aaagccgctg gacatcgacg agcgagcgcg gcttaaggag cttgaggaag aagtccgccg
      481 tttgaagatg gaacgagaag tgctaaaaaa agcggcggcg tggtttgcga aagagagcat
      541 ataaagttcg ctttcatctg tgatctggat gaagaagaac gacgcaagcc acgcaaagaa
      601 cgaatccctg tctccttaat gtgcgaggtg cttgacgtgt cccgcggtgg tttctatgca
      661 tggctcaccc gggcgaagcc ggatcgggag aaagaagatg acgagctcac cgtggtcatc
      721 aagaaaatcc atgatgacca cgaaggccga ttgggtgtcg accggctcgt ggctgagctg
      781 gccaagctcg gccgccggca ctcacctcac cgcgtccgac gtctcgtccg tgccgcgggt
      841 ctgagctgcg tgcatccgcg cccgtaccgg gcaaccacgg tgcgggacga ggccaatcct
      901 gagggcctgg tcgacctcgt cgggcgtgag ttcgtgcccc aggggccgaa tcaactgtgg
      961 ttcaccgaca tcacctatat tcggacgtgg aatggctggg cgtatctcgt ctcgattctg
     1021 gatggatata cccgcaaagt cgtcggctgg tcggctggtg gtcatatgcg cacgagtctg
     1081 gtcaccgatg cgctggcgat ggcgatcacc cggcagcgtc caggaatcgg tgatgtcgtc
     1141 atccattctg accgaggtag ccaatacacg agccggagct tccgggacat ggcgttggcg
     1201 aacgggatca tcccgtcggt cggacacact ggtatttgct ttgataatgc catggcggaa
     1261 tcgttcaacg ccaccatcaa gaaagaattg atccacctgc a
//
LOCUS       DASQSL010001629         1469 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_191227, whole genome shotgun sequence.
ACCESSION   DASQSL010001629 DASQSL010000000
VERSION     DASQSL010001629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1469
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191227"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..201)
                     /locus_tag="VE844_16565"
     CDS             complement(<1..201)
                     /locus_tag="VE844_16565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02898.1"
                     /translation="MGAIKKLNSIRTIKYTGWVAGLLYVFLDLYIVFTVDLNIVFTDL
                     FAPLSMLYVPEALVGRVEVVGGI"
     gene            complement(188..463)
                     /locus_tag="VE844_16570"
     CDS             complement(188..463)
                     /locus_tag="VE844_16570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012947835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02899.1"
                     /translation="MIYRIKVKGHLDRRWTEWFGGLTITLEDNGETLLTGQVADQAAL
                     HGLLRKVRDLGLPLISVTRAQTDQIDGPDFKQPIEASTLERKQDGSN"
     gene            complement(681..>1469)
                     /locus_tag="VE844_16575"
     CDS             complement(681..>1469)
                     /locus_tag="VE844_16575"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HZC02900.1"
                     /translation="DLLDEAERQYVESPDPDVRPVAALKTRVWVAQGRLAEALGWTRE
                     QGLSAHDDLSYLREFEHITLARVLLARYKSDREERYIHEAMELLERLLIAAEEGGRMG
                     SVIEILVLQALAHEAQGDSPAALVPLERALSLAEPEGYVRIFVDEGLPMARLLYEALS
                     QGVESDYIRRLLAAFPVAESEQTASSPMRGSKSELVEPLSERELEVLQLIAEGLTNQE
                     VATELYLSLHTVKVHARNIFTKLAVKNRAQAVARGRALGILSQT"
BASE COUNT          307 a          431 c          389 g          342 t
ORIGIN      
        1 tatgccgcct acaacctcaa ccctgccgac caatgcctca ggaacataca acatgctcaa
       61 gggagcgaat aaatcggtga atacaatgtt cagatccacg gtgaacacaa tgtacagatc
      121 gaggaatacg tacagcaacc ctgcgaccca ccctgtatac ttgatcgtcc taatcgagtt
      181 cagcttttta attgctccca tcttgttttc tttctaaggt gctggcctcg attggctgtt
      241 tgaaatctgg cccgtctatc tggtcggttt gggcgcgcgt gactgagatg agtggtaggc
      301 ctaagtcgcg caccttcctt agcaacccat gcaacgcagc ctgatctgcc acctggccgg
      361 tcaaaagcgt ctcaccgttg tcttccagtg tgatggtcag gcccccgaac cactccgtcc
      421 atcgacgatc cagatggccc ttgaccttga ttcgatagat cattggttct tttttcctcc
      481 ttcttgacta tgtcgagctt ggtgcaagcc aacgcttaca acatagccgc caggtggtag
      541 tagtgtcata cctcttaaga ggtattcgga ggattattcg cgttcgcttg gaagggggaa
      601 tcagtaaagc gggccgctat ccgctagccc gtcttttttg gttgatgcgt caacgatgct
      661 gagtggaggc gtacatgcga ttacgtttga gataagatcc ccaaggctct gcccctggcg
      721 accgcttggg cgcgattctt gaccgcaagt ttggtgaata tattgcgagc gtgaaccttg
      781 accgtatgca gcgagagata aagctcggtt gcaacttcct gattggtcag cccttcggcg
      841 atgagttgga gtacttcgag ctcgcgctcg ctcagcggct cgaccagttc agatttggaa
      901 cctcgcattg gcgatgacgc cgtttgctca gattccgcaa cagggaatgc tgctagcaac
      961 cgacgaatat aatctgattc aactccttga gaaagggctt catagagtag acgagccatc
     1021 ggcaaccctt cgtccacaaa gatacggacg tagccctccg gctcggccag cgacagggca
     1081 cgttccagag gcacgagggc agcagggctg tcgccttgcg cctcgtgagc gagagcctgc
     1141 agcaccagga tctcgatcac gctacccatc ctcccgcctt cttccgccgc tataaggagg
     1201 cgctccagga gctccattgc ctcgtgaatg tagcgttctt cccgatcgct cttgtatcgg
     1261 gccaagagca ccctggccag cgtgatgtgc tcgaactcgc gcaggtagct gaggtcgtca
     1321 tgggcggaca agccctgctc acgcgtccag cccagggctt cagccagcct accctgcgca
     1381 acccacaccc gcgtcttcag cgccgctacg ggacgcacgt cggggtcggg actttcgaca
     1441 tactggcgct ccgcctcgtc gagcagatc
//
LOCUS       DASQSL010001630         1668 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_171338, whole genome shotgun sequence.
ACCESSION   DASQSL010001630 DASQSL010000000
VERSION     DASQSL010001630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1668
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171338"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(324..758)
                     /gene="tnpA"
                     /locus_tag="VE844_16580"
     CDS             complement(324..758)
                     /gene="tnpA"
                     /locus_tag="VE844_16580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010559389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HZC02901.1"
                     /translation="MSRFRKLSHTLWHCQYHIVWTPNYRFRILSGQVSEEVSRCIRAF
                     CEHLKCEVVELNIQIDHVHLIVMVPPKTSVSDVVGTIKGRSAIRVFNQFRHLKQKPYW
                     GNHFWSRGYCVDTIGLDAEKIRLYVKYQEKRERQAEQGRLQF"
     gene            complement(1155..>1668)
                     /locus_tag="VE844_16585"
     CDS             complement(1155..>1668)
                     /locus_tag="VE844_16585"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HZC02902.1"
                     /translation="IQHPFFPVEMQHLFRAHINFRELESGESVALDARTRVTAVRLTH
                     PNAALGYVLQLDALRVAYITDHEHPLEQRSPQVREAVTGVDLLIHDAQYSRDEIRHGK
                     QGWGHSAWEDVVDLAREAQVKQLFLFHHDPEATDEHLNARQFQAQQRFPPTFVAREGL
                     KIPLHSVSGR"
BASE COUNT          332 a          486 c          473 g          377 t
ORIGIN      
        1 taagaggtcg agggggatgc gaagattgag aatcgtcgag gggggccttt gggtcgccct
       61 ccgcgtttcc gaggcgccct ctctgggcgc tccggcggtg gggttggtcc ctgggttttc
      121 gagtcgcgtc gtggctctgc caacatgggg taagtctccg ggttgaaatt ggggtcttgc
      181 ttactcaatg atcctactat atcatatttc tgtagttaaa agatccaccc ccagaggggg
      241 tggacttggt ataacccctg gaaggggatg aaattgcctt gccccctgag gaggcaagga
      301 tgagttgtcc cctgttgttc ttatcagaac tgaagacggc cttgttcagc ctgacgctca
      361 cgcttctcct gatacttcac gtacaggcgg attttctcgg catccagtcc gatggtgtct
      421 acacaatagc cacgggacca gaaatggttg ccccaatacg gcttctgctt caaatgccga
      481 aattggttga aaacccgaat cgcgcttctc cctttgatcg tgcccacgac atccgatacc
      541 gaggttttcg gtggcaccat gacgatgaga tggacgtggt cgatctggat attgagttca
      601 accacttcac atttgagatg ttcacaaaag gcccgaatac atcggctgac ctcctcgctg
      661 acttgcccgc tgaggatgcg gaagcggtag ttcggtgtcc atacgatgtg atattggcaa
      721 tgccacaagg tgtgtgatag cttgcgaaaa cgactcacgg ttgactcctt tgcgagagtg
      781 gtggggacaa ctccgctctg gagtaccatc gagtcgttca actggcaaag ccgttgaact
      841 ctgaccacgc ccgaaggacg tggttttcta catcctcaat aaaaaagtcg ggcttttctt
      901 taaagattat caggatttgt ataagcagcc cacgcatcca acccagccga ggccaatacc
      961 caagtcgtga caaagcccat tggaagcctc cccacgcccc gggcgatcgc gccattgctt
     1021 gtgcgacatc ccccctcctc ctctctccgt atgttatgtt tctccccata ctgggtcgtg
     1081 ccgtgatcga ccaccgcctc ccagccctct cggccgcctt gtgcgcagac gcccagccca
     1141 ccgcagtggg cgggttatct gccggagacg ctgtgcagcg ggattttcag cccttcgcgc
     1201 gccacaaagg tcggcggaaa gcgctgctgc gcctgaaact ggcgcgcatt gaggtgctcg
     1261 tctgtggctt ctgggtcatg atgaaacaga aacagctgtt tgacctgggc ctcccgggcc
     1321 aagtccacca cgtcttccca agcactatgc ccccagccct gcttgccgtg gcggatctca
     1381 tcccggctgt attgcgcatc atgaatgagc agatcgaccc cggtgacggc ttcccgcacc
     1441 tgcggcgagc gctgctccag ggggtgttcg tgatccgtga tataggcgac ccgcagcgcg
     1501 tcgagctgga gcacataccc taacgcggca ttgggatgcg tgaggcggac cgccgtgacg
     1561 cgggtacgcg cgtcgagcgc cacgctctcg ccactctcca actcgcggaa attgatgtgc
     1621 gcccgaaaca ggtgctgcat ctcgaccggg aagaaggggt gctgaatc
//
LOCUS       DASQSL010001631         3879 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_199002, whole genome shotgun sequence.
ACCESSION   DASQSL010001631 DASQSL010000000
VERSION     DASQSL010001631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3879)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3879)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3879
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199002"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..304)
                     /locus_tag="VE844_16590"
     CDS             complement(<1..304)
                     /locus_tag="VE844_16590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018144928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase"
                     /protein_id="HZC02903.1"
                     /translation="MLPRSATVKRDTKETQITVTLNLDGTGRSNLNTDLPFLDHMLDQ
                     VARHGMFDLDIEAQGDLHIDAHHTVEDVGITLGQAFTKALSDKRGIHRYGHAYVPLD"
     gene            383..1294
                     /gene="hemF"
                     /locus_tag="VE844_16595"
     CDS             383..1294
                     /gene="hemF"
                     /locus_tag="VE844_16595"
                     /EC_number="1.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018954828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004109 - coproporphyrinogen oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-dependent coproporphyrinogen oxidase"
                     /protein_id="HZC02904.1"
                     /translation="MSTKIDAETVKSYLLGLQDRICAALEHEDGQGRFSEDRWQRPEG
                     GGGRSRVLTEGGVFEQGGVNFSDVFGAHLPPSATAHRSELAGRTFRAMGVSLVIHPRN
                     PYVPTAHANVRFISAEVAGTEPVWWFGGGFDLTPYYGFEEDVRHWHRTVLKACVPFGE
                     DVYPRYKKWCDEYFYLRHRDEPRGVGGLFFDDLHEGGFERCFSFMKSVGDHYLPAYLP
                     IVERRKGMPFGERERDFQLYRRGRYVEFNLVYDRGTLFGLQSGGRTESILMSLPPLVK
                     WRYNWKPEPGTPEAELYERFLKPQQWI"
     gene            complement(1272..1817)
                     /locus_tag="VE844_16600"
     CDS             complement(1272..1817)
                     /locus_tag="VE844_16600"
                     /inference="COORDINATES: protein motif:HMM:NF014715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004340 - glucokinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005536 - glucose binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0051156 - glucose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HZC02905.1"
                     /translation="MPSEGGHMDFAPRNDEEISLLQFLQGRFGRHVSIERVVSGMGLR
                     NIYEYLVAADFAAEDPALRRELQCFEAPARLISEAALAGRSRLCMKALDMFVAAYGAA
                     AGNLALVGMAVGGVYLGGGIAPQILPKLTEGLFMEAFLDKGRFRSLLERIPVRVILKP
                     ETPMLGAAYHAARILKSIAAA"
     gene            complement(1706..2350)
                     /locus_tag="VE844_16605"
     CDS             complement(1706..2350)
                     /locus_tag="VE844_16605"
                     /inference="COORDINATES: protein motif:HMM:NF014715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004340 - glucokinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005536 - glucose binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0051156 - glucose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HZC02906.1"
                     /translation="MMILCGDIGATKTQMGLYRYRDDTLELEHSSAFTSSAYAGLTEI
                     IEIFLAEAPAERIEIACFGVAGPVIQDRVEATNLPWQITGHKVAQEKGLARVVLINDL
                     VAMAWGINALGEASLVTIHSGGATPVDNDALPLTPHSSPLTLHSDDATSWDNAVLIAA
                     GTGLGMALLLPGQAYACLCLQKAVIWISLPAMMKKSASCNSCRGGSAVMSASSA"
     gene            complement(2377..>3879)
                     /locus_tag="VE844_16610"
     CDS             complement(2377..>3879)
                     /locus_tag="VE844_16610"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010961451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004329 - formate-tetrahydrofolate ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HZC02907.1"
                     /translation="LVTAMTPTPAGEGKTTTTVGLGDALNRIGKRACICLREPSLGPV
                     FGMKGGAAGGGYAQVVPMEDINLHFTGDFNAIALANNLLAAMVDNHIHHSNALGFDLR
                     RIAWKRVVDMNDRALREINVGLGGPSNGFPREDGFDIVVASEVMAIFCLATSLRDLKE
                     RLGNIIVGYTRDQQPIRARDLNAHGAMAVLLKEAIKPNLVQTLENNPAIIHGGPFANI
                     AHGCNSVIATRAALKLADYVVTEAGFGADLGAEKFVDIKCRKAGLRPDAVVIVATIRA
                     LKYHGGMDLKSVTTEDLPALEKGIANLESHVNNVRNHFGLPCVVSINHFTSDTPAEIE
                     LLKKKLAHHEAPVVVARHWAEGGAGAEELARTVVDIIDKVPSDFRYVYDDSMPLWDKM
                     KAIATTIYGANEITADTKVRAQIKKLQEDGYGHYPVCVAKTQYSFSTDPQLRSVPSHH
                     EINIREVRLAAGAEFVVMICGDIMTMPGLPKVPAAEKIDIDANGKVIGLF"
BASE COUNT          794 a         1129 c         1146 g          810 t
ORIGIN      
        1 catctaacgg cacataggca tgtccatagc gatggatacc tcgcttgtcg ctcagggcct
       61 tggtaaaggc ttggcctagc gtgattccga catcttcgac ggtgtgatgc gcatcgatgt
      121 gcagatcgcc ttgagcttca atgtcaaggt cgaacatccc atgccgcgcc acctgatcca
      181 gcatgtgatc gagaaaaggc aggtcggtgt tgagattgga tctacccgta ccgtcgaggt
      241 tgagggtcac cgtgatctgg gtttctttgg tgtcgcgttt gacagtcgcc gatcgaggga
      301 gcattcagtc cttccacttt tgatgagtac cttaaaatac aataccccgt tattgatacc
      361 aataaaacca gggtgtacct ctatgagcac gaaaatcgat gccgagaccg tcaaaagcta
      421 tcttttggga ttacaagacc gcatctgtgc ggccctcgag cacgaggatg gccagggccg
      481 gttcagcgag gatcgttggc agcggcccga aggcggcggt ggtcgcagcc gggtcctcac
      541 tgaagggggc gtattcgagc agggaggggt caatttctcc gatgtcttcg gggcgcacct
      601 gcctccctcg gccaccgccc atcgatcgga gctcgccgga cggacgttcc gggccatggg
      661 cgtgtcgctg gtcatccacc cgcgcaaccc ctatgtgcct accgctcatg ccaatgtgcg
      721 gtttatcagt gccgaagtgg cgggcactga gcccgtatgg tggtttggcg gcgggttcga
      781 cctgacgcct tattatggct tcgaggagga cgtccgtcac tggcatcgga ccgttcttaa
      841 ggcgtgtgtt ccctttggag aggatgtcta tccccgctat aagaaatggt gcgatgagta
      901 tttctatctg cgccaccgcg acgagccacg cggggtgggc ggcttattct tcgacgatct
      961 ccatgaggga gggttcgagc gctgtttttc cttcatgaag agcgtgggcg atcactacct
     1021 gccggcctat ctgcccattg tagagcgccg caaagggatg cctttcggtg agcgcgagcg
     1081 ggattttcaa ctctaccggc gcggccgcta cgtggaattc aatctggtct atgaccgcgg
     1141 tacgctcttt ggcttgcaat ccggtggccg caccgaatct attcttatgt ccctgccgcc
     1201 gcttgtaaaa tggcgctaca actggaaacc cgagccggga acaccggagg cagagctgta
     1261 tgagcgattt ctcaagccgc agcaatggat ttgaggatcc gggccgcatg gtaggcggca
     1321 ccgagcatag gtgtctcggg cttgaggatg acacgcacag ggatccgctc aagcaaggag
     1381 cgaaatcggc ccttgtcgag aaaggcctcc ataaagagac cttcggtaag cttgggaagg
     1441 atctggggtg cgataccgcc gcccaggtat acgccgccga ccgccattcc gacgagggcc
     1501 aggttgccgg cggcagcgcc gtaagcagcg acaaacatat ccagggcttt catacaaagg
     1561 cgcgatcggc ccgccagcgc agcctcggag atcaggcggg cgggggcctc gaagcattgc
     1621 agctcgcgtc gtagagcggg atcttcggca gcgaagtccg ctgcaacaag atattcatag
     1681 atattccgca gccccatccc ggagactacg cgctcgatgc tgacatgacg gccgaaccgc
     1741 ccctgcagga attgcaagag gctgatttct tcatcattgc ggggagcgaa atccatatga
     1801 ccgccttctg aaggcatagg caggcgtatg cctgccctgg cagcagcaag gccataccga
     1861 gacccgtgcc ggcggcaatc agtacagcat tgtcccatga agtcgcgtca tcggaatgaa
     1921 gggtgagggg tgaggagtga ggggtgaggg gtaacgcatc attatccaca ggggtcgcgc
     1981 caccggaatg aatggtcacc aagctcgcct cgccgagagc gttgatcccc cacgccattg
     2041 ccacgaggtc attgatgagg accacgcgag cgaggccctt ctcttgagcc accttatgcc
     2101 ccgtgatctg ccagggtaga ttggtggcct cgaccctgtc ttgaatcacc ggaccggcaa
     2161 caccaaagca ggcgatctcg atccgctcgg caggagcctc agcaagaaaa atctcaatga
     2221 tctccgtgag cccagcatac gcgctgctgg tgaaggcgct tgaatgctca agctcaagtg
     2281 tatcatcccg atatcgataa agacccatct gggtcttggt tgcgccgata tcgccgcaga
     2341 ggatcatcat agactcagca ccttgtcggc tctcctctaa aagagcccaa tgaccttgcc
     2401 gttggcgtca atgtcgatct tctcggctgc cggcaccttt ggcaggcccg gcatggtcat
     2461 gatatcgcca cagatcatca ccacgaactc ggcgccggcc gcgagccgca cctcgcggat
     2521 attgatctca tggtgcgatg gaacgctgcg caactgcgga tcggtggaga aggagtattg
     2581 tgtcttggcc acgcacaccg ggtaatgccc gtagccatcc tcttggagtt tcttgatctg
     2641 ggcgcgcacc ttagtgtccg cggtgatctc attggccccg taaattgtgg tagcgatcgc
     2701 cttcatcttg tcccaaagcg gcatggaatc atcatagaca tacctgaaat cgctcgggac
     2761 cttgtcgata atatcgacca ccgtgcgcgc caattcctcc gcgcccgccc caccttcagc
     2821 ccaatgccga gccacaacca ccggtgcttc gtgatgggcc agctttttct tgagcagctc
     2881 gatctcggcc ggcgtatcgg aggtgaagtg gttgatcgag accacacagg gcaggccaaa
     2941 atgattgcgc acgttattga cgtgactctc cagattagcg atcccttttt ccaaggccgg
     3001 taaatcttct gtggtaaccg atttcagatc cataccccca tggtatttga gcgcccgtat
     3061 ggtcgccacg atcaccacgg catcaggacg caggcccgct ttgcggcatt tgatatcgac
     3121 aaacttttca gcaccgagat cggcgccaaa gccggcctcc gtcaccacgt agtcagcgag
     3181 cttgagggcc gctcgggtgg cgatgaccga gttacagccg tgggcgatgt tggcgaaggg
     3241 gccgccatgg atgatcgccg gattgttctc gagcgtctgt accaggttgg gtttgatcgc
     3301 ctccttgagc agcacagcca tagcgccgtg agcgttcaga tcacgcgcgc ggatcggctg
     3361 ctggtcgcgg gtgtagccga cgatgatgtt gcccaagcgc tctttcagat cccgaagcga
     3421 ggtggcaagg caaaaaatcg ccatcacctc cgaagccacc acgatgtcaa agccgtcctc
     3481 ccgtggaaat ccgttgctgg gtccaccaag ccccacattg atctcgcgca gcgcgcggtc
     3541 gttcatatcg acaacccgct tccaggcgat gcgcctgaga tcgaaaccga gcgcgttgct
     3601 gtgatggatg tgattgtcga ccatagccgc caggagatta ttggcgagcg caatggcgtt
     3661 gaagtcgccg gtgaaatgca gattgatgtc ctccatcggc acgacttgcg cataaccgcc
     3721 gcccgccgcc ccgcccttca tgccgaagac cggcccgagc gaaggctcgc gcaggcagat
     3781 gcaggccctc ttgccgatcc gatttaaggc atctccaaga ccgacggtgg tcgtggtctt
     3841 gccttcgccc gccggggtag gtgtcatggc cgtgaccag
//
LOCUS       DASQSL010001632         1477 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_199006, whole genome shotgun sequence.
ACCESSION   DASQSL010001632 DASQSL010000000
VERSION     DASQSL010001632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1477)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1477)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1477
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199006"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            105..1199
                     /locus_tag="VE844_16615"
     CDS             105..1199
                     /locus_tag="VE844_16615"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide epimerase"
                     /protein_id="HZC02908.1"
                     /translation="MNNPLNIKRLDIHTLDVPLKAPFTTSSAKLEVIHNLAIQITLAD
                     GSIGWGEIPTLPPITLEDQSTALVALQSEAELLTGRNAGEWRRIAVELSERIPHLASV
                     RAGIEMAMIDALARSWRAPLFRFFGGYHDSVVTDITIPICPDEEAQPLAEQYRKWGFD
                     TIKAKIGLDASEDVERLRAIRRGHPTCRLILDANAGYSVEQTLDVLRHLRQAGIEPVL
                     LEQPVAREDWEGLGRLARAGGVPVAADESCRTPAEAIRIAKHHLAQVINIKLAKCGVV
                     QALEIAAIARASHLGLMIGGMVETRLAMGFSAHFAAGLGGFDWIDLDTPLLLADDPIS
                     GGYRTEGARYLLDVGTAGHGGILKTQKVAT"
     gene            complement(1292..>1477)
                     /locus_tag="VE844_16620"
     CDS             complement(1292..>1477)
                     /locus_tag="VE844_16620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02909.1"
                     /translation="LVREGFVRMGQSPPTFLGIEVALLQCDVEAYFSGIRPVPPLIQL
                     AGFWNYEDRGTTVCRSS"
BASE COUNT          338 a          426 c          409 g          304 t
ORIGIN      
        1 caaacactgc gctggcaggc ggcgtatgaa tagtggacct gcctcgtttt cataacgtca
       61 ggtcgcaaag aggaacgcca atttgatgag caaaccaagc ttcaatgaat aaccctctca
      121 acatcaagcg cctcgatatt cacacgctgg atgtgccatt gaaggcaccg ttcaccacct
      181 catccgctaa gcttgaggtc atccataacc ttgcgatcca gatcacattg gcagacggtt
      241 ccatcggctg gggagagatc cccactttgc ctcccatcac tcttgaggat cagtcgaccg
      301 ccctggtagc acttcaaagc gaagccgaac tcctcactgg aagaaatgcc ggagagtggc
      361 gccgcatcgc ggtagaattg agtgagcgta taccgcatct tgcctctgtg cgggccggta
      421 ttgagatggc catgatcgat gccttggccc ggagctggcg tgcgcctttg tttcgttttt
      481 tcggtggtta ccacgacagc gttgtcaccg acattaccat accgatctgt ccagacgagg
      541 aagcccaacc actggccgaa cagtacagga aatggggttt tgatacgatt aaggcgaaga
      601 tcggcctcga tgcctcagaa gacgtggagc gcttgcgtgc catccgtcgc ggtcacccca
      661 cctgccgatt gatactcgat gccaatgcag gctactcggt ggagcaaacc ttggatgtcc
      721 tgaggcacct tcggcaagcg ggaatagaac ccgtattact tgaacagcct gtcgcgcgcg
      781 aggattggga ggggctgggc cggctggcac gcgcaggcgg tgtcccggtc gcggccgatg
      841 aatcctgccg cacgccagcg gaggccatac gcattgctaa acaccacttg gcccaggtca
      901 ttaatatcaa actggccaag tgcggtgtgg ttcaggcgct cgagatagcc gccatcgcac
      961 gcgcctctca ccttggtctc atgatcggcg ggatggtcga gacgcgacta gccatggggt
     1021 tcagcgccca ctttgccgcc gggcttggcg gctttgactg gatcgatctc gatacccctt
     1081 tgctgctcgc cgatgacccc atctccgggg ggtatagaac agaaggtgca cgctacctac
     1141 tagatgtcgg aaccgcagga cacgggggga tcctgaaaac tcaaaaggtg gccacctaag
     1201 ctcgactttg tcaatttata gagagcggcg tatcccaacc ctgagaaatt caagtgcctt
     1261 tccttcgctt ttatcagacc caggcgcaaa gttaagacga gcggcacacc gttgtgccac
     1321 ggtcttcgta gttccaaaag ccagcgagtt gaataagagg tggaacaggg cgtatgccag
     1381 agaaatacgc ctccacgtca cactgcagta gcgcgacctc gatcccaaga aacgtcggag
     1441 ggctctgtcc catacggaca aacccttctc gaaccag
//
LOCUS       DASQSL010001633         3226 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_25926, whole genome shotgun sequence.
ACCESSION   DASQSL010001633 DASQSL010000000
VERSION     DASQSL010001633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3226
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25926"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..911
                     /locus_tag="VE844_16625"
     CDS             <1..911
                     /locus_tag="VE844_16625"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HZC02910.1"
                     /translation="DAREYCDVLVCQMNSPSEARLGRLLLRPALSVLAELQNRDEGEP
                     PLPSPQQIYLVTGLEDATWFLNTGKASAQIIRDVLHNNGLDIEDLDSILDFGCGVGRI
                     MRHWHTLEKADLHGSDYNPDLVAWCKDNLPFAEFRVNGLEGKLEYENETFDFIYAWSV
                     FTHFTESLHFHWIEELSRVLRPGGHLLITTHGNTYLQHYWESYRRHLLGTNQGDYLQH
                     LIDTHGEEFVQQHNPLSQEQREHFRNGQLVVLGEDGAGSNQCHAFHTEQYVYRTLAKD
                     LTVVDFTPGGAGDTSSHQDLYLLRKP"
     gene            913..2034
                     /locus_tag="VE844_16630"
     CDS             913..2034
                     /locus_tag="VE844_16630"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HZC02911.1"
                     /translation="MPLLEQRVVLELVRNVKVFLNLQAGVVRGEVPNPKRSTEITTPV
                     AGARGAIQRQGVAQLEQELEEKDRENARLRAQLLAGGDDTPVGVKPENMIWIFGAGRT
                     GSSWLSRMMMDLEGHARWDEPYVGNIFGTAYYVNAGDRMRAREDFALGDRYREAWLNS
                     IRNFILEGANVRFSRMAEDSYLVIKEPNGSMGAPLIMKALPESRMILLVRDPRDVVSS
                     VLAANRKGSWGDQWRVDGSGGKSLADTNPDAFVRQWANTCATILGKAEEAYEVHGGPK
                     VVVRYEDLRYETFETMKRIYSTLKIQVDDKQLRRVIEKHAWENVPEEKKGTDKPHRKA
                     TPGGWREDLTPKQARIIEEITAPILDEFYPGWATGTNEQ"
     gene            2227..>3226
                     /locus_tag="VE844_16635"
     CDS             2227..>3226
                     /locus_tag="VE844_16635"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HZC02912.1"
                     /translation="MGEHDAQRKNRREKLRMPIFRNRTVFEIYRDIRAFLNLDLGVIL
                     GQSPYLQQLESRAEQLQQAQRLLAEKDHKIGELQAELNVRHSGARVKNLNPQNIIWIF
                     GSIRSGSTWLRSMMGDLGRYRVWEEPGVGRLFGEFYVKAQTGNLRSSGFILSDLTRKK
                     WIKSVRNFVLDGAEYANPHLGASNCLVVKEPGGGSVGAPLLMEALPESRMILLIRDPR
                     DVMASILDAARKGGWYYEWQDEGNRKPVPLPDRDPDTFVKRRSSTYLLQIGNARQAYD
                     AHRGHKVLVKYEDLRMNTLGTMKRIYSTLRLPFDEEGLARVVQKHAWENIPREGKGE"
BASE COUNT          806 a          875 c          937 g          608 t
ORIGIN      
        1 ccgacgcacg tgagtactgc gatgtgctcg tgtgccagat gaactcgccc tccgaagcgc
       61 gtctcggacg cttgctactt cgcccggcgt tatcggtgct cgccgagtta cagaacagag
      121 acgaaggtga gccacctctg ccctctccgc agcagatcta cctcgtaacg ggcctcgaag
      181 atgctacttg gttcctgaac acgggcaagg catctgctca gatcattcgc gacgtgctgc
      241 acaataacgg cctggacatc gaggacttag attcgatctt ggatttcggc tgcggggtcg
      301 gacggataat gcggcactgg cacacgcttg agaaagcgga tttgcacgga tcggattaca
      361 accctgatct ggtcgcatgg tgcaaagaca acctaccttt cgccgagttt cgagtcaacg
      421 gccttgaagg caagctcgaa tacgagaacg agacgtttga tttcatctac gcttggtcgg
      481 tgttcacgca cttcacggaa tctctgcact tccactggat cgaagagttg tcaagagtac
      541 ttcgaccggg cggacacctg cttatcacca cgcatggcaa tacgtacctg cagcattact
      601 gggaatctta ccggcgacac cttctaggga cgaaccaagg agattacctt cagcacctga
      661 tcgacaccca cggcgaagaa tttgttcaac agcacaaccc gctctcccag gaacagagag
      721 agcacttcag aaacggacag ctagtagttc tcggtgagga cggagcaggc agcaatcagt
      781 gccatgcttt tcacacagag cagtacgtgt atagaacgtt ggccaaagat ctcaccgtgg
      841 tggacttcac tccaggtggg gctggtgaca cctcctctca ccaggacctc tatttgttaa
      901 ggaaaccata gaatgcctct ccttgagcaa cgtgtagtcc tcgaactggt tcgaaacgtg
      961 aaagtgttct tgaacctgca agcaggggtt gttcgcggcg aagtaccgaa tcctaagagg
     1021 tctaccgaga tcaccactcc ggttgccggt gcccggggag ccattcaacg gcaaggtgtt
     1081 gctcagctag aacaagagct tgaggagaag gatcgggaga acgccaggct gcgggcgcag
     1141 ctcctcgcgg gcggcgacga tactccggtc ggcgtaaagc ccgagaacat gatctggatc
     1201 ttcggtgctg ggcggaccgg gagcagctgg ctcagccgca tgatgatgga cctcgaggga
     1261 cacgctcgct gggacgagcc gtacgtgggc aacatcttcg gcaccgccta ctacgtcaac
     1321 gccggcgacc ggatgcgggc tcgcgaagat ttcgccctcg gggatcgcta cagggaggcg
     1381 tggttaaact ctatccgcaa cttcatcctg gaaggagcca acgtacgctt ctccagaatg
     1441 gccgaagaca gctacctggt gatcaaggag cccaacggct cgatgggagc gccgctcatc
     1501 atgaaggcgc tgcccgagag ccgcatgatc ttgctggtgc gtgatcccag ggacgtggtc
     1561 tcctccgtcc tggccgccaa ccgcaaaggt agctggggcg accagtggcg ggtggacggg
     1621 agcggtggaa agtcgctggc ggacacgaat ccggacgcgt tcgtgcgcca gtgggccaac
     1681 acatgcgcga cgatactggg caaggcggag gaggcctacg aagtccacgg aggacccaag
     1741 gtcgtcgtca ggtacgagga tctccgctac gagacttttg agaccatgaa gcgcatctac
     1801 tccaccctga agattcaagt cgatgataag cagctgcggc gagtgatcga gaaacacgcc
     1861 tgggagaacg ttccagagga gaagaaaggc acagacaagc ctcaccgtaa ggcaacaccg
     1921 ggaggctgga gggaagacct cacgcccaag caagcgcgga tcatagaaga gataaccgcc
     1981 cccatcctgg atgagttcta ccccgggtgg gctaccggca cgaacgagca gtaacagtgg
     2041 aggaacccgg tgcctatact caaaacccgc acggcgctcg aattcaagcg caacatacgc
     2101 ctgttcctca acgtggaggc cgaggatctg ctggtcgagc taggacaacg gttagtagaa
     2161 tgaccgccgg catccccgcc aagctacgaa aaggcgataa ctaccaagga gatcatcccc
     2221 cagcacttgg gagagcatga tgcacagagg aaaaatcgac gggagaaact acggatgccg
     2281 atctttagga accgcacagt ctttgagata taccgggaca taagagcgtt cctgaaccta
     2341 gacttgggcg tcatccttgg ccaatcaccg tatcttcaac agctcgaatc tagagccgag
     2401 caactccagc aagcccagag actgctagca gaaaaagacc ataaaattgg cgaattgcaa
     2461 gcggaactta acgtcagaca ttctggtgcc cgggtcaaga acctgaatcc ccagaatata
     2521 atctggatct tcggttccat tcgcagcggc agtacgtggc tcagaagcat gatgggggat
     2581 ttgggtcgat accgggtctg ggaggaacca ggagtaggca ggctttttgg agagttctac
     2641 gtcaaggccc aaacaggaaa cttgcgctcc tcaggcttta tcctgagcga tctgactcgc
     2701 aagaaatgga tcaagtccgt taggaatttt gttctggatg gcgccgaata cgctaacccc
     2761 catctaggcg ccagtaactg cctggtagtc aaggaacccg gcggtggttc tgtgggcgcc
     2821 ccattgctca tggaggcttt gccagaaagc cggatgatac tcctgatccg agatcctaga
     2881 gacgttatgg catccattct tgatgctgct cggaaaggtg gctggtacta cgaatggcag
     2941 gatgagggca acagaaagcc ggtccctttg ccggacagag acccggacac cttcgtaaag
     3001 cgccgatcca gcacatacct actacagata ggcaacgcta ggcaagccta tgacgctcac
     3061 agaggtcaca aagtcttggt taagtatgag gatctgagga tgaacacttt agggacgatg
     3121 aagcgcatct actccaccct tagactaccc ttcgacgaag aaggattagc ccgtgtggtg
     3181 cagaagcacg cctgggagaa catacccagg gaaggaaagg gcgagg
//
LOCUS       DASQSL010001634         1442 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_199014, whole genome shotgun sequence.
ACCESSION   DASQSL010001634 DASQSL010000000
VERSION     DASQSL010001634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1442)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1442)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1442
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199014"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1442)
                     /gene="infB"
                     /locus_tag="VE844_16640"
     CDS             complement(<1..>1442)
                     /gene="infB"
                     /locus_tag="VE844_16640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013220013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HZC02913.1"
                     /translation="SAIAEQEAGRRSAEEIAEQEQIAAFERAQEEELKQQQELEAQRR
                     AEEILEAQRKAEELLEAQARAKAEKEAHMRAEEDLLAKAATERMAREEGSAELLLEAS
                     PEVGKQVKWPSREEKPPSRRQKEEPQTTPKRRELHVAEDKTSRRRRKPAPRHGVVPIT
                     SKHGFELPTAPIIREVAIPETITIAELAQKMSVKAAEVIKIMISLGTMATINQAIDQE
                     TAVIVVEEMGHRPKLLKAHDLEAELLAGVEVTNGEKIVRPPVVTIMGHVDHGKTSLLD
                     YIRRTKVAAGEAGGITQHIGAYHVSTPKGMITFLDTPGHAAFTAMRARGAKVTDIVIL
                     VVAADDGVMPQTIEAIHHAKAANVPIIVAINKIDKPNADPDRIKKDLTAYGILAEEWG
                     GETLFVQVSAKTGQGIEELLEIILLQAEVLELRAVPTGPASGVVIESRLDKGRGPIAT
                     ILIQNGTLKKGDILLTGQEFGRVRAMLDETG"
BASE COUNT          232 a          444 c          379 g          387 t
ORIGIN      
        1 ccggtctcat ccaacatcgc ccgcacgcgc ccaaactctt gtccggtcaa taggatatcg
       61 ccctttttca gagtaccgtt ttggatcagg atcgtcgcta taggaccacg gcccttgtcc
      121 aatcgcgact cgatgacaac cccggaggcc ggcccagttg gaactgcccg gagctcgagc
      181 acttcggcct gtagcaagat gatctccaac agctcctcga tcccttgccc ggttttggct
      241 gagacctgaa caaacagggt ctcccctccc cactcttcag ccaggatccc ataggccgtc
      301 agatccttct tgatgcgatc cggatccgcg ttaggtttat cgatcttgtt gatggcgacg
      361 ataataggta cattggcagc ctttgcatgg tggatggctt cgatcgtttg cggcatcacg
      421 ccatcatcgg ctgcaaccac caggatcaca atgtcggtga ccttggctcc gcgtgcccgc
      481 atggcggtaa acgccgcatg gccgggcgtg tcaaggaagg tgatcatgcc ttttggggta
      541 gagacatgat aagcgccgat gtgttgggtg atcccaccgg cctcgcctgc cgctaccttg
      601 gtccggcgga tgtaatcgag tagcgaggtc ttgccgtgat cgacgtggcc cataatggtg
      661 actacgggcg gacgcacgat cttctcaccg ttggttacct ctacgcctgc caataactcg
      721 gcttccagat catgcgcctt gagcaacttg gggcgatgcc ccatttcctc taccacgata
      781 acagccgtct cctgatcgat agcttggttg atggtcgcca tcgttccaag gctgatcatg
      841 atcttgatga cctccgctgc cttgacggac atcttttgcg ccagttcagc gatggtgatc
      901 gtctccggta ttgccacttc acgaatgatc ggcgctgttg gcagctcaaa gccgtgtttt
      961 gaggtgatcg gcaccactcc gtgtctgggt gcaggcttcc ttctccggcg gctggtctta
     1021 tcttccgcta catgtaattc ccgacgctta ggagtcgttt gtggctcttc cttttgccgc
     1081 cgggaaggcg gcttttcctc acgggacggc cattttacct gctttcctac ctcagggctt
     1141 gcttcgagaa gaagttcagc tgatccctct tccctagcca tcctctccgt ggccgctttg
     1201 gcgaggaggt cttcctccgc cctcatatgg gcttccttct cagcttttgc ccgcgcttgg
     1261 gcttcgagga gctcctctgc tttgcgttgg gcttcgagga tctcctctgc tctgcgctgt
     1321 gcttcaagct cttgctgctg cttcaattct tcttcctgcg ctcgttcaaa ggctgcgatc
     1381 tgctcttgtt ctgctatctc ttcggcgcta cgtcgcccgg cttcttgctc ggcaatcgcg
     1441 ct
//
LOCUS       DASQSL010001635         1296 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_161552, whole genome shotgun sequence.
ACCESSION   DASQSL010001635 DASQSL010000000
VERSION     DASQSL010001635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1296
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161552"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..704
                     /locus_tag="VE844_16645"
     CDS             <1..704
                     /locus_tag="VE844_16645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02914.1"
                     /translation="EGGHHPFSWETLANNPPRSLPIPVDLGLAVDKSFFETAIKNMIR
                     EEVEKLNAHPSVQKYGMSFTLDSDPVVQFYSGGIGVTINVSTPPPRPRLGPIYPCGPP
                     APIRFSYAGTVKPQVSTQPGGTTGDESYIGASLSGQLTVTNWGSPRQATCGLLAQRFV
                     PDLFNPKPPPLDAQPVYILVEDKDNNGEPNKCVDEILYVTGIDTFDRFYFAGRSTFMD
                     QTYERFPSNECPPPT"
     gene            complement(836..>1296)
                     /locus_tag="VE844_16650"
     CDS             complement(836..>1296)
                     /locus_tag="VE844_16650"
                     /inference="COORDINATES: protein motif:HMM:NF037020.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HZC02915.1"
                     /translation="WSDVRTPETYLSYGRAYGFASPDGERFDEPHDYPESSRLSLNEW
                     APSGLWTLAEHAAVLGEAPGRIAIRFHARDVNLVMGPAERGPSVPFRVLIDGEAPGAA
                     HGTDVDEQGNGTLSEQRTYQLIRQRKPIVDRVFEIEFLDSGVEAYCFTFG"
BASE COUNT          275 a          413 c          343 g          265 t
ORIGIN      
        1 ccgagggcgg gcaccatccc ttctcttggg aaacgctggc taacaacccg cccagatccc
       61 tccccattcc tgtggacttg gggctcgctg ttgacaaatc gttctttgag actgccatca
      121 agaacatgat aagagaggaa gtggagaagc taaacgccca ccctagtgtg cagaaatatg
      181 gcatgagctt cactttggac tccgatccgg tggtgcaatt ctattctggc ggcatcggcg
      241 tcacgatcaa cgtcagtacc cctcctccac gtccacgtct gggccccatt tacccgtgtg
      301 gacctcctgc acccattcgc ttctcttacg ccggcacagt aaagccgcag gtgagcacgc
      361 aacccggcgg cacgacgggc gacgagtcgt acatcggcgc ctccctaagc gggcagctta
      421 cagtgaccaa ttggggcagc ccacgtcagg cgacgtgcgg tttgcttgcg cagaggttcg
      481 tgccggatct cttcaacccc aaaccaccgc cattagatgc gcagccagtc tacatccttg
      541 ttgaggataa ggataacaat ggtgagccga acaagtgcgt cgacgaaatc ctctacgtta
      601 cggggataga cacgtttgac cgattctact tcgcaggcag aagcacgttc atggaccaga
      661 cctacgagcg atttccgtcc aatgaatgtc cgccaccgac gtgaacgtct gcacttatct
      721 tcttccactt ccgggtacga ggccaactat acctgagaat cgtcctacct tgaaagaatc
      781 gcccatatga ggtctctcct gttcgtcgta gggactgaat agcctctgcc atcgatcagc
      841 cgaacgtgaa gcaataagcc tccactcccg aatcgagaaa ctcgatctcg aagactcgat
      901 caacgatggg cttgcgctgt cggatcagct gatacgtccg ctgttcgctg agcgtgccgt
      961 tgccctgctc gtctacgtct gtaccgtgag cggcgcccgg cgcctctcca tcgatgagca
     1021 cgcgaaacgg caccgacgga cctcgctcgg ccggtcccat caccaggttc acgtcgcgcg
     1081 catggaagcg gatcgcaatc cgtccgggtg cctcgcctag cactgccgcg tgctcagcaa
     1141 gcgtccagag gcctgacggg gcccactcat tcaagctcag ccgcgacgac tcgggatagt
     1201 cgtgaggctc gtcgaaccgc tcaccgtctg gagacgcgaa gccgtaagcg cgcccatagc
     1261 tcaagtatgt ctcgggcgtt ctcacatcgc tccagt
//
LOCUS       DASQSL010001636         1915 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_36022, whole genome shotgun sequence.
ACCESSION   DASQSL010001636 DASQSL010000000
VERSION     DASQSL010001636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1915
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36022"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..203
                     /locus_tag="VE844_16655"
     CDS             <1..203
                     /locus_tag="VE844_16655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02916.1"
                     /translation="FGLRQQLLLLLDHLLSTATARRLISTPAGGGALRYRDFTSTVWV
                     WALVNFAFFRKPFFLTSFLLIA"
     gene            complement(232..456)
                     /locus_tag="VE844_16660"
     CDS             complement(232..456)
                     /locus_tag="VE844_16660"
                     /inference="COORDINATES: protein motif:HMM:NF012621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HZC02917.1"
                     /translation="MIEATPTGSLAEIELLISNMVCEGCANKIKSTLVGLPGVREVKP
                     KVKQKHVTVRYEPAKIQEQQIKECDRKNEI"
     gene            586..>1915
                     /locus_tag="VE844_16665"
     CDS             586..>1915
                     /locus_tag="VE844_16665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002684251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZC02918.1"
                     /translation="MTALKSLSCEQFLLKSVWWAVLILAGLVAACSELPADHIRFGLA
                     TAPVTLDPRYATDAVSYRISRLIYRSLVEFDAAFRPVPALASWQQITPTCYRFRLGTA
                     GRLFHDGTHLTASDVKATYESVLDTHNASPHRGSLTVIQRIESPDRDTVDFFLHKPDP
                     LFPGRLVMGILPAHLIARGHPFNKAPVGSGPFRFWHWPNEAELQLERWIDKQLVEFIT
                     ITDPTVRVLKLLRGEIDLLQGDLPPEMVRWLEARPTIQVQKGRGDTFAYLGFNLDDPV
                     AGRLPIRQAIAYALDRQAIIHSILGGTARKASTLFPPDHWAGPPRAYKYDYNLDKARR
                     LLRDAGYTAPLRISYKTSNNPFRVRLATVIQHQLKQAGIEVQIQSYDWGTFYADIRTG
                     RFQMYSLGWVGVKLPDIFRYTLHSDSVPPQGANRGRFKSPVVDSLIEQAET"
BASE COUNT          373 a          556 c          505 g          481 t
ORIGIN      
        1 atttcggcct gcggcaacag ctactgttgc ttcttgacca tctcctttcc acagcaacag
       61 cgcggcgctt gatttccacc cccgccgggg gcggcgccct tcgttaccgc gatttcacat
      121 ccacagtttg ggtctgggca ctggtaaact tcgccttctt tagaaagcca ttttttctca
      181 cctcctttct gttgatcgcc tgactataca gccctctagg catcaatggc cctaaatctc
      241 gttttttcga tcgcattcct tgatctgctg ctcctgaatc ttggcgggct cgtagcgcac
      301 ggtcacgtgc ttttgcttaa ccttgggttt gacttctcgc acgcccggca gccccacaag
      361 cgtactcttt atcttgttcg cgcatccttc gcataccata ttggagatca gaagctcgat
      421 ttcggcaagg gagccagtcg gcgtcgcttc tattatgtgt tataacaccg gacaattcta
      481 tttgttgaca gcagaactgt ctattaaaac tccagttact ggttcgtcat gagattccac
      541 agactgatag gcctgaaggc agcagatcgc tcaggatcga tggcagtgac tgctttaaaa
      601 tccctatcct gcgagcagtt cttactcaag tcagtatggt gggcggtgct gatcctggcc
      661 ggccttgtgg ccgcttgttc agaactgcct gccgatcata ttcgttttgg tcttgccacc
      721 gccccggtca ccctggatcc gcgctatgct accgatgccg tctcttatcg catcagccgc
      781 ctgatctatc ggagcctggt ggagtttgat gccgcctttc gtccggtccc ggcgctcgcc
      841 agttggcagc agatcacgcc tacctgttac cggtttaggc taggaacagc gggccggctg
      901 tttcatgatg ggacgcattt gacggcgagt gatgtcaagg cgacctatga gtctgtgttg
      961 gatacccaca atgcatcgcc tcaccgtggc tcgctgactg taatccaacg gatcgagagc
     1021 ccggatcgag acaccgtcga tttctttttg cataagccgg atcccctgtt tccgggacgg
     1081 cttgtcatgg ggatcttacc tgcccatctg atcgcccgcg gccatccctt taacaaggcc
     1141 ccggtcggga gtgggccgtt tcggttttgg cactggccaa acgaagccga gctccagcta
     1201 gagcgctgga tcgacaaaca gcttgtcgag tttatcacca tcaccgatcc tacggtacgg
     1261 gtgctgaagc tcctgcgcgg cgagatcgat ctgttgcagg gcgatcttcc cccggagatg
     1321 gtcagatggc ttgaggcgcg gcctactatc caagtacaga aggggcgtgg agataccttt
     1381 gcctacttgg gttttaatct ggacgatccg gtggcgggcc ggctaccgat tcggcaggcg
     1441 attgcctatg cgcttgatcg gcaggcgatc attcattcta tcttgggcgg gaccgcacgc
     1501 aaggcaagca ccctgttccc gccggatcac tgggcaggcc ctcctcgagc ttacaaatac
     1561 gactataacc tggataaggc ccgccggctg ctgagagacg caggttacac ggcgccgctt
     1621 cggatcagct ataaaacctc caataatccc ttccgtgtgc gcttagccac ggtgatccag
     1681 catcaattaa agcaggccgg catcgaggta cagatccaaa gctatgattg ggggacattt
     1741 tacgccgaca tccggaccgg ccggttccag atgtatagcc tcggttgggt gggagttaag
     1801 ctgccagata tctttcgcta tacccttcac agcgactccg tgcctcctca aggcgcaaat
     1861 cgcggccggt ttaagagtcc ggttgtagat tcattgatcg aacaagccga aacca
//
LOCUS       DASQSL010001637         2425 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_51095, whole genome shotgun sequence.
ACCESSION   DASQSL010001637 DASQSL010000000
VERSION     DASQSL010001637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2425
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_51095"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..972
                     /locus_tag="VE844_16670"
     CDS             <1..972
                     /locus_tag="VE844_16670"
                     /inference="COORDINATES: protein motif:HMM:NF040081.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6399 domain-containing protein"
                     /protein_id="HZC02919.1"
                     /translation="QHELSKAVGAPLAAKERAADKALTEAKEQIEHIQARLESTGNQP
                     DKRGPGRPPKTPASLEQAQQTLKAASCEHERLAQQRKHVKQSIEAIGQAYHFVDLERG
                     VRRSGQLIASDIHTQMGTIRTIAQHEHLSQRSLARIDKAERVVPKMQATIEFVSGYVG
                     QRINALDLAPPVSFAMHAKLIPSYYLDRVAQTRTVEGGEPLRQLACRLRVPLFEPGGA
                     LSQLSPETQRGLQQQAQEFAEIFQRSSSNVEGRNGYLSLRNHQLRGLDLPRKRACLTT
                     IHNFFLTRPDGTTAAERFFGQKPRSMFTAILDSVDLPPAPRSPQRKF"
     gene            1191..2308
                     /locus_tag="VE844_16675"
                     /pseudo
     CDS             1191..2308
                     /locus_tag="VE844_16675"
                     /inference="COORDINATES: protein motif:HMM:NF019228.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ISAzo13 family transposase"
BASE COUNT          565 a          661 c          711 g          488 t
ORIGIN      
        1 cagcatgaac tcagcaaagc cgttggtgct cccctggccg ccaaagagcg agctgccgac
       61 aaagccctca ccgaggcaaa ggagcaaatt gagcacatcc aagcgcgtct tgagagcaca
      121 ggcaatcagc ctgataaacg cggcccaggc cgtcctccaa aaacgcctgc gagccttgaa
      181 caagcccagc aaaccctcaa ggcggccagc tgtgagcatg agcgactggc ccagcaacga
      241 aagcacgtca aacagagcat cgaggccatc ggccaggcct atcattttgt tgacctggag
      301 cgtggggtgc gtcgaagcgg ccaactcatc gcctccgata tccacactca aatggggacg
      361 attcgcacca tcgctcagca cgaacacctc agccagagaa gtctcgcacg gatcgacaaa
      421 gccgagcggg tggtccccaa aatgcaggca accattgagt ttgtctccgg ttatgtggga
      481 cagcggatca atgcgttgga cttagccccg cccgtttcct tcgccatgca tgccaagctc
      541 atcccctcct attatctcga tcgcgtggcc caaacgcgca ctgtcgaggg tggtgagccc
      601 cttcggcaac tggcttgccg tcttcgcgtg cccctgtttg agcctggcgg ggccttgagt
      661 cagttgagtc ccgagaccca gagaggcctc caacagcagg cccaagagtt cgctgagatt
      721 ttccagcggt cgagttccaa cgttgaagga cgaaacgggt atttgtcgct gcgcaaccac
      781 caacttcgag ggcttgatct gccgcgtaag cgggcctgcc tgaccacaat tcacaacttc
      841 tttctgacgc gccctgatgg aaccacagcg gcagagcgct tttttggtca gaaaccgcgc
      901 tccatgttta cggcgatttt ggattctgtc gatctgccgc ccgcgcctcg aagtccacag
      961 cgcaaattct aaggcgattt ccaacaaaag ttttaccgag acagcgacgc gttgaggggt
     1021 taagcttggt ctttcatgtg ctcagccatc caccttcgcg agggtatccg atgtttatgt
     1081 tcgctccgac tccgaccgcc tctgtgtctc caacgcctca acagattgcc gatctacgtc
     1141 tggctgcctc gcaaatgacc ggggccacgc gcaggtcgtt tcaggcggag atggctctga
     1201 agtattgcga cggtaacgcc cgtcgggccg agacggtctt tggctggggg cggcacaaca
     1261 ttgaagtggg cttggctgaa aagcgtacgg gcattgcgtg tctgagctta cacgcggcgt
     1321 tcagtggccg cccgtgttgg gaggagcgct atcccgaggc ggcgcaggcc ctcattgacc
     1381 ttgcctcaag ccattcgcaa caagacccga catttcgcac caccgtgtcc tatacgcgtt
     1441 tgacggccca cagggccatt gaagggctcc gacagcaggg gattgaggag gcggtgttgc
     1501 cggccccgtc aacgctggcg gtgatcttga atcgcctggg ctttcgcttg cgcaacgttg
     1561 tgaagagcaa gccgctcaag aaggtgccag aaaccgatgc gattttcgcc aatgtccaaa
     1621 aaaagacgag gaagcggcgt tagaggggac ggtgaagcgc tggagtgtgg attgtaaagc
     1681 gacggtaaag atcggtgact tttcgcgcgg cggtcagacg cggggtgatg atcaagcctt
     1741 agatcatgat ctgggttgcg aggcgaaata tacgccgtgc gggattgtcg atgaagatag
     1801 cgctcaactc gatctgaact ttggtagttc atacaaaacg agtgacttta ttgtcgatac
     1861 tcttgaagcc aagtggaatc gcttagagga gcaagaaaag gcagaagtca ccaagctcca
     1921 gatcaaaatg gataatggtc cagagagtag tggtcggcgg acacagtttc tctatcgcat
     1981 ggttcagttt gccgatgcca tcggcaagcc gcttcagctg ctgtatgatc ccccctacca
     2041 tagcaagtat aatccgattg agcggtgctg ggggatcttg gagcttcact ggaatgggac
     2101 gaaactgatc gatgccgaga cgatgctaga gtgggcgaag agcatgacct ggaaaggtct
     2161 gcacccggtg gtggaactga gccgccgagt ttaccaaaag ggagtgaagt tgagcaagaa
     2221 ggcgatggag gcggtggagg cccgattgga acgcgatgcg aagttgccca agtacgacat
     2281 tttgatccaa ccggctgcca cagcctgaag aggtaaaatc ttttacagaa atcgcctaag
     2341 acctcataga ggatgcgctt gtaacggcga ttagccacgg cggacagaat acagaagggg
     2401 ccatcgtaga gttcatcggc cgcca
//
LOCUS       DASQSL010001638         1052 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_79469, whole genome shotgun sequence.
ACCESSION   DASQSL010001638 DASQSL010000000
VERSION     DASQSL010001638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79469"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            310..864
                     /locus_tag="VE844_16680"
     CDS             310..864
                     /locus_tag="VE844_16680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012692138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HZC02920.1"
                     /translation="MEKLPPSDDAATTNPHRFEASQGPRILGPNDGKAVDLGSVGVRF
                     MVWSEESGGGFSLVEHPIPPRTLAAPLHRHTNEDEYSYVLEGRLGALLGDEVVYAEKG
                     DLVFKPRDQWHTFWNAGDQPCRILEIISPGGFEHVFREVAEDPEAMAGETASALDARY
                     GIAADYDSIGRLCEEHGLTFPTEE"
BASE COUNT          218 a          299 c          315 g          220 t
ORIGIN      
        1 agcggcgcag gcggcgtggg cgtcctccta ctttctgcag ggccacctac cgacagcgca
       61 atgtggtcga gcgtgcggtg gggtagatca aggagcaccg gcggatcgcc acgcgctttg
      121 agaagcgggc cagtagtttc ctggcgatgg tgaagttgtc gttcgtgcga cgttacttcc
      181 gcatgctgga gcggttctca ggcagtacgt gaagctgcgc cattgggtct cttgcaaaca
      241 tcactctcga tagggtttac tgttcatcac acccagtatg ttggaagtgg agaactaaag
      301 aggagaccta tggaaaaact accaccttcc gatgatgcgg caactaccaa ccctcatcgc
      361 tttgaggcct ctcagggccc gcgcatcctc gggcccaacg atgggaaagc cgtcgacttg
      421 ggctccgtcg gcgttcgatt catggtttgg agcgaggaat ccggcggtgg gttctctctc
      481 gtcgagcatc cgatccctcc acggacactc gccgccccgc tccaccgtca cacgaacgag
      541 gacgagtaca gctatgtcct tgagggacgt ttgggagcgc tgctcggcga tgaggtcgtg
      601 tacgcggaga agggagacct cgtcttcaaa ccccgcgacc agtggcacac tttttggaac
      661 gccggtgacc aaccgtgccg gatccttgag atcatctctc ccgggggatt cgagcatgtg
      721 ttcagggagg tggccgagga cccggaggcg atggccggcg aaacggcctc ggcgctcgat
      781 gcccgctacg gcattgcggc cgattacgac agcatcgggc gcctctgtga agagcacgga
      841 ctcaccttcc ctaccgagga atgaagtagc ccacgagggt aggtacggtc cagtagcgca
      901 attacaggaa cgcgacacat cacccaatgg cactgttttc agacagaacg tagactaact
      961 gatccactag agtcagtttc tatgcatccg tggttgttac cgctgttcag aaatccgctt
     1021 atctaagccg aattttcgaa tcggctgttt ac
//
LOCUS       DASQSL010001639         1006 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_161560, whole genome shotgun sequence.
ACCESSION   DASQSL010001639 DASQSL010000000
VERSION     DASQSL010001639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161560"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..879)
                     /locus_tag="VE844_16685"
     CDS             complement(<1..879)
                     /locus_tag="VE844_16685"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014293499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HZC02921.1"
                     /translation="MSTHVYIGAARRTPLGSFLGSLSSLSAIDLGAVAIQAAVADRGI
                     DPAAIDEVLMGCILPAGLGQAPARQAALKAGIPPSVPCTTINKVCGSAMKAVMLGYDQ
                     IRAGSARSVVAGGMESMSNAPYLVPHARKGLRMGPRQLLDHMLYDGLQDPGSGELMGY
                     FAEVCADRYGSTRLQQDEYAMESVRRSLAVIESGAFQAEIVPVVVAQRGGTVTVSEDE
                     QPRKCDLAKVALMKPAFRQEGGTVTAANASSISDGAAAVFLLRADVAEDLGVTPLARI
                     LGHATHAQVPGEFTTAP"
BASE COUNT          220 a          307 c          291 g          188 t
ORIGIN      
        1 aggggccgtg gtgaattcgc cgggcacctg ggcatgggtg gcatggccca ggatacgggc
       61 gagcggtgtt acgcctagat cctcggcgac atcggcacgg agcaaaaaaa cggcggcggc
      121 gccatcggag atgctggagg cattggccgc cgtcaccgta ccgccttcct gtctgaaggc
      181 aggtttcatc agcgctacct tagcaagatc acacttgcgc ggttgttcat cttcgctgac
      241 cgtgaccgtc ccgccgcgtt gtgctaccac gaccggcacg atttccgctt gaaaagcacc
      301 gctctcgatg acggcgaggc ttctgcgcac cgattccatc gcatattcat cttgttgcag
      361 acgggtggat ccgtaccgat ccgcgcaaac ctcggcaaaa tagcccatga gctcaccact
      421 tcccggatct tgcaggccat catagagcat gtggtcgagg agttgccgcg gccccatgcg
      481 caggccttta cgcgcgtgag gcacgagata aggcgcattg ctcatcgact ccatcccacc
      541 cgcgaccacg ctacgagcag aaccggcccg gatctgatcg taacccaaca tcaccgcttt
      601 catggccgaa ccgcagacct tattgatcgt ggtgcagggc acggaggggg ggataccggc
      661 cttgagcgcc gcttgacggg caggtgcttg gccaagaccg gcaggaagaa tacagcccat
      721 gaggacctca tcgatcgcgg caggatcgat accacggtct gcaacggctg cctggatcgc
      781 caccgcccca agatcgatag ccgataagga ggaaagcgaa cctaaaaacg agcccagggg
      841 tgttcgccgt gctgccccga tatagacatg agtgctcata gatttaaact cgattttacc
      901 gctcaaaccc gatgatttgc cgcaccccct ccctcaccct tccccttagc aagggggagg
      961 gaaagggtgg ggattagcct tcaaggtaca ggaaacaacg ttattt
//
LOCUS       DASQSL010001640         1089 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_199042, whole genome shotgun sequence.
ACCESSION   DASQSL010001640 DASQSL010000000
VERSION     DASQSL010001640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199042"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..483)
                     /locus_tag="VE844_16690"
     CDS             complement(<1..483)
                     /locus_tag="VE844_16690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011379400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine synthetase N-terminal
                     domain-containing protein"
                     /protein_id="HZC02922.1"
                     /translation="MKRDFMFTSESVTEGHPDKLCDQISDAIIDCFLQQDPFSRVIAE
                     CAVATGILFIASRFASRASIDIPETARQVINQVGYERKDFNAKDCTIMTSFTELPGSQ
                     YQTRDETALDDEEIEEITAKNVANAFGFACTHAPAMLPLPVWLAHKLARRLASVRLQR
                     Q"
     gene            complement(480..>1089)
                     /locus_tag="VE844_16695"
     CDS             complement(480..>1089)
                     /locus_tag="VE844_16695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018953329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cation-translocating P-type ATPase C-terminal
                     domain-containing protein"
                     /protein_id="HZC02923.1"
                     /translation="NPMQLLWINLLTDVFPALALSVEPPEPDVLRQSPRDPHQPIISQ
                     ADLKRYGLESLNITASVMASYGYGILRYGLGPRANTLAFMTLTQAQLLHSYSCRSETH
                     GIFSKDKLPSNRYLDLAAGGSLLLQILTVLVPGLRALLGTTPVGPVDALAIAGGAVLP
                     FIMNEARKVRDSQAVHPLPHPPPSREREGVGIEHLTNRSITP"
BASE COUNT          239 a          286 c          322 g          242 t
ORIGIN      
        1 ttgcctctgt agcctcacag aggccagccg ccgtgcgagc ttatgtgcaa gccatacggg
       61 cagagggagc atggcgggtg catgggtgca ggcgaagcca aaggcattgg ctacgttctt
      121 ggcggttatt tcttcgatct cttcgtcatc aagcgctgtt tcgtctcttg tctggtactg
      181 actccccggc agctcggtga agctggtcat gatggtgcag tctttggcat tgaagtcctt
      241 ccgctcatat cccacctggt tgatcacctg gcgggcagtc tcggggatgt ctatgctcgc
      301 gcgggatgcg aagcgcgagg cgatgaacag gatcccggtg gccaccgcgc attccgctat
      361 caccctggag aagggatcct gctgtaggaa gcaatcaatg atggcatccg agatctggtc
      421 gcacaattta tcgggatggc cttcagtgac ggattcagag gtaaacataa aatcccgttt
      481 catggtgtga tactcctgtt ggtgagatgc tcaatcccca ccccttccct ctccctagag
      541 gggggaggat gagggagggg gtgaacggct tggctgtctc tgaccttcct cgcctcgttc
      601 ataatgaacg gaagcactgc ccctcccgcg atcgcaagtg catccactgg gcccacaggt
      661 gtggtgccca gcaatgcccg aagcccaggc accagcactg tgagtatctg gagcaataat
      721 gaaccacccg ccgctagatc caaataacga ttggatggaa gcttatcttt gctgaagatc
      781 ccatgggttt ctgaacgaca gctgtaggaa tgcaaaagct gcgcttgggt aagcgtcatg
      841 aacgccaagg tattggcccg gggcccaagg ccatagcgta agatcccata accgtagctt
      901 gccataacgc tggcagtaat attcaaggat tctaatccat aacgctttaa atcagcctgg
      961 gagatgatag gctgatgggg gtcgcgcggc gactgacgca gcacatcggg ctccgggggc
     1021 tctacgctta aggccaaggc cggaaagaca tcggtgagca gattgatcca gagcagttgc
     1081 atgggattg
//
LOCUS       DASQSL010001641         1594 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_26002, whole genome shotgun sequence.
ACCESSION   DASQSL010001641 DASQSL010000000
VERSION     DASQSL010001641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26002"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1457)
                     /gene="dnaK"
                     /locus_tag="VE844_16700"
     CDS             complement(<1..1457)
                     /gene="dnaK"
                     /locus_tag="VE844_16700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012258113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HZC02924.1"
                     /translation="MAKIIGIDLGTTNSLVAIVQGGKPVVIPTAEGGNLCPSVVGFGK
                     SGEILVGQVAKRQAIVNPENTVYSIKRFMGRRYDEVEAERKIVSYKVVPGPAGDARVS
                     IPQTGKSYTPQEISAMILQKLKRDAEAYLGEPVTQGVITVPAYFNDSQRQATKDAGRI
                     AGLEVLRIINEPTAAALAYGLDKKTHETILVWDLGGGTFDVSILAVGEGLIEVRATNG
                     DTHLGGDDWDQRIVLWMVQEFKKDQAIDLSQDRMALQRLREAAEKAKIELSSTLETEI
                     NLPFITADASGPKHLQLKLTRARLEQLTEDLLERCTGPFERALSDAKLRPQDLNEVVL
                     VGGATRMPMVQELVRRLTGGKEPNKGVNPDEVVAVGAAIQASVLAGETKEVLLLDVTP
                     LSLGVETLGGVMTALIPRNTTIPTRKTEIFSTAEDGQTAVDVKVYQGERPLAADNMLL
                     GQFRLEGIPPAPRGVPQIEVTFDIDANGILNVAAR"
BASE COUNT          291 a          512 c          456 g          335 t
ORIGIN      
        1 tcacgcgccg caacgttcaa gatgccattg gcatcgatat cgaaggtgac ctcgatctga
       61 ggcacaccac gcggtgccgg tgggatcccc tcgagccgaa attgcccgag cagcatattg
      121 tcggcggcca gcggacgctc cccctggtag accttgacat ccactgccgt ctgaccatct
      181 tcggccgtcg agaagatctc ggttttgcgg gtagggatcg tggtattgcg cgggatgagc
      241 gccgtcatca ccccgcccag ggtttctacc ccaaggctca atggggtcac atccagaagc
      301 agcacctcct tggtctcacc cgccagcacg gacgcctgga tcgccgcccc taccgctacc
      361 acctcatccg gattgacgcc cttgttcggc tctttgccac cggtgagccg gcgcaccaac
      421 tcctggacca tcggcatccg cgtggcgcca ccgaccagga cgacttcgtt caggtcctgg
      481 gggcggagct tggcatcgga gagtgcacgc tcaaaggggc cggtacagcg ctcaagcaga
      541 tcctctgtga gctgctcgag ccgcgcgcgt gtgagcttga gttgcaggtg cttggggccg
      601 ctggcatcgg cggtgataaa cggcaggttg atctccgtct cgagcgtgct cgagagctcg
      661 atcttggcct tttctgccgc ttcccgcagc cgctgcagag ccatccggtc ctggctcagg
      721 tcaatcgcct gatccttctt gaactcctgc accatccata gaacaatccg ttgatcccaa
      781 tcatcgcctc cgagatgggt atccccgttc gtcgcgcgga cctcaatgag cccttcgccc
      841 accgcgagga tagaaacgtc aaacgtgccg cctcccaggt cccagaccag aatagtctca
      901 tgggtcttct tatcaaggcc gtaagccagc gctgcggcag tgggttcgtt gatgatgcgc
      961 agcacctcga ggcccgcgat cctgcccgcg tccttggtag cctggcgctg gctgtcattg
     1021 aagtaggccg ggacagtgat caccccctgg gtcaccggct cgcccaggta ggcctctgca
     1081 tcccgcttga gcttttgcag gatcatcgcc gagatctcct ggggcgtgta gctcttgccc
     1141 gtctggggaa tagacacgcg cgcatccccc gccgggccgg ggacgacctt gtatgagact
     1201 atcttgcgct cagcttccac ctcgtcgtag cggcggccca taaagcgctt gatagaatag
     1261 acggtatttt cggggttaac gatggcctga cgtttggcca cctgcccgac caggatctcg
     1321 ccgcttttgc caaacccaac caccgaggga cagagattgc cgccttcggc cgtggggatg
     1381 accacgggct tgcctccctg gacaatagcc accaaggagt tcgtggttcc taaatcaata
     1441 ccgattatct ttgccatgag agattctccg ggtgaaatag aagatgggtg aacctaccgt
     1501 attattacgt attatacaga agtctgcggg tccctggcgc ccgatttggc ccatgccggg
     1561 tcaatgcgct ctgagcatac acctgggtcc tcca
//
LOCUS       DASQSL010001642         1418 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_51132, whole genome shotgun sequence.
ACCESSION   DASQSL010001642 DASQSL010000000
VERSION     DASQSL010001642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1418
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_51132"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            89..1048
                     /locus_tag="VE844_16705"
     CDS             89..1048
                     /locus_tag="VE844_16705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02925.1"
                     /translation="MRWPAGLLRQLTGVERAAGTLWGWVQQVGQGAMVQFEGELRALA
                     AGELPAPEPREAELEALPLVIGADGVRVPFRPHPRTAKGKTRWREIKVAILARLGARL
                     TRQGTRVTRLCQRRLVAVLGTIDDLSPRLWLEAVRQGAHTTMRVVWLSDGGQGLWTVF
                     QRLFQAVGAVAILDFYHATQNLYKGASAWLDGRTRACQQWFADFRHRLRHGHEQHVLA
                     ELAALVEATHLPESARQTLTNVYTYLKTHEDHIRYDHFKAAGLPIGSGLVESACKWLI
                     QQCFKGVGMRWSEAGFNHLLHLRLAWVNQRFDSFFSDRVLSPN"
BASE COUNT          302 a          351 c          461 g          304 t
ORIGIN      
        1 ttggatcaag tgttggggtt ggtgccccac caacgcacgg gggcggaagt gcagtggatg
       61 ggctgtctgt tggcagtatt tgtgccgtat gagatggccc gccggcttac tgcggcagtt
      121 gaccggagta gagcgggcgg cgggcacgct ctgggggtgg gtccagcagg tggggcaagg
      181 ggcgatggtg cagttcgagg gcgagttacg agcgttggcg gcgggggaac tccccgcacc
      241 cgagccgaga gaggcggaac tggaagcgct gccgctggtg ataggtgcgg atggggtgag
      301 ggtaccgttt cgaccgcacc cccgcacggc gaaggggaaa acccggtggc gggagatcaa
      361 ggtggcgatt ctggctcgcc tgggcgcgcg gctgacccgc caaggaacac gcgtgacccg
      421 gctctgccag cgccggttag tggcagtgtt gggcacgatc gacgacttga gcccgcggtt
      481 gtggctggaa gccgtgcgcc aaggggcgca cacgacgatg cgggtggtgt ggctatcgga
      541 tggtggtcag ggtttgtgga ccgtgttcca gcgcctcttc caggcggtcg gggcggtggc
      601 gattttagac ttttaccatg ccacgcaaaa cctgtacaaa ggcgccagcg cttggctgga
      661 tgggcggacc cgcgcctgcc agcagtggtt tgccgacttc cggcaccgtc tgcggcacgg
      721 ccacgagcag cacgtgctgg cggaattggc ggccctagtc gaggccacgc atttacccga
      781 gtctgcccgg caaaccttaa ccaacgttta cacctatctg aaaacccatg aagatcatat
      841 tcgctatgac catttcaaag ccgccggctt gccaattggc agtggcttag tggaaagcgc
      901 ctgtaaatgg ctgattcaac aatgcttcaa aggggtaggt atgcgctgga gtgaagcggg
      961 gttcaatcat ctgcttcatc tccgattggc gtgggttaac caacgattcg atagcttctt
     1021 ctcagatagg gtgctctccc ccaactagga gatacgcccg tttcccgcaa tgccgttcga
     1081 cggcccggtg ataccggtcg ttatggtaat attcagagaa atacagacac tgaatttgca
     1141 gttcatttct aacaggcaag acaatatctg ggttacgggc ttgcaggata taaaacaatc
     1201 tcggtgttta aaaggtatta catcaatagg aggtcacatt tggtaatttc atgagcagga
     1261 tgggaatgta caatcagcag tatgaaaatt catgagctga tttggccgga agatcgcatc
     1321 gatcatattg cacgacatgg tgtgtctcca gaagaagaag tttgcttagt cctgtcccat
     1381 atgaaaaacc ctgtcaagct gcaagttgca gaggcctt
//
LOCUS       DASQSL010001643         2553 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_67032, whole genome shotgun sequence.
ACCESSION   DASQSL010001643 DASQSL010000000
VERSION     DASQSL010001643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2553
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67032"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..294)
                     /gene="ispF"
                     /locus_tag="VE844_16710"
     CDS             complement(<1..294)
                     /gene="ispF"
                     /locus_tag="VE844_16710"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004840898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HZC02926.1"
                     /translation="MRIGIGYDVHRLVHGRQLILGGVSIPSEWGLEGHSDADVLLHAI
                     SDALLGALALGDLGQHFPDTDPSYRGISSAELLERVTKMVDDHAYRLHNVDAVV"
     gene            complement(291..1019)
                     /gene="ispD"
                     /locus_tag="VE844_16715"
     CDS             complement(291..1019)
                     /gene="ispD"
                     /locus_tag="VE844_16715"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: protein motif:HMM:NF013308.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050518 - 2-C-methyl-D-erythritol
                     4-phosphate cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HZC02927.1"
                     /translation="MIAAALIPAAGRGRRMGCGVEKQFMQVAGKPLLAHTLACFEATP
                     SIDRVVVIVPAGREAYCAEEIVAAERFRKVAHIVAGAETRQRSVTAGFRCLGENVDVV
                     VIHDGARPFVSPLLIQTSVDRAYQHGSAIVAIPESDTLKRVSVDGTVVETVDRQQLWR
                     AQTPQAFQRSILERALAYAEEHDLDATDEASLVESLSWPIRIVPGSMWNFKITTPDDL
                     RFAKILLTRCANGSSPGEPALERL"
     gene            complement(1016..1948)
                     /locus_tag="VE844_16720"
     CDS             complement(1016..1948)
                     /locus_tag="VE844_16720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008339849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HZC02928.1"
                     /translation="MATGIFLAGGVIALERAVREVPPKVLLGGLLGLIVTLLLGHLLT
                     TSLLILPLMGDADGFAVRGLIQVALAYMGIAVGARKGAEFDLNEYKKHFRGETKEENS
                     KLLDTSVIIDGRVADVCETGFLEGTLIIPQFVLRELQQIADSSDPIKRNRGRRGLDIL
                     QRIQRSVEVDVKILDQDFPKIRDVDSKLVALGKQLGAKILTNDFNLNKVAELQGVPVL
                     NVNQLANAVRPIVLPGELMNVHILKEGKEYGQGVAYLDDGTMVVVDSARKYVGKNVDV
                     AVTSVLQTTAGRMIFTGLRDDFEREENLESRVGR"
     gene            complement(2194..>2553)
                     /locus_tag="VE844_16725"
     CDS             complement(2194..>2553)
                     /locus_tag="VE844_16725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020383188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium chelatase domain-containing protein"
                     /protein_id="HZC02929.1"
                     /translation="LIAILEKRVGLHLHGEDVYLNVAGGMRVTEPAVDLGVAAAIASS
                     FRDRPLDPRTVIMGEVGLGGEVRAIPHLEARLREAAKLGFQQAVIPEANRPPSALAGT
                     LTIISVTSVAAAFENLF"
BASE COUNT          574 a          783 c          667 g          529 t
ORIGIN      
        1 cacgacagca tcgacgttgt gtaagcggta ggcatggtcg tcgaccatct tagtcacccg
       61 ttcgaggagt tcggcactcg agatgccgcg atagctcggg tcagtgtctg ggaaatgctg
      121 cccgaggtct cccaaagcca aggccccaag cagtgcgtcg ctgatggcgt gtaataagac
      181 gtcggcatca gagtgccctt caagacccca ctccgagggg atcgataccc ctccgaggat
      241 aagttggcgt ccatgcacca ggcggtggac atcgtaccca atgccaattc tcacaaccgc
      301 tccaacgcag gttcgcccgg agagctccca ttggcgcacc gagttaataa aatcttcgcg
      361 aagcgcaggt catctggagt cgtaatcttg aaattccaca tcgagcctgg gacgatacgg
      421 atgggccatg acagcgattc aacgagcgaa gcttcatccg tcgcgtccaa gtcgtgctct
      481 tcggcgtatg ctagagcacg ctccaaaatc gaccgctgga acgcctgggg ggtttgcgct
      541 cgccacaact gctgccggtc cacggtctcg actaccgtcc catcaactga cacgcgcttc
      601 aatgtgtccg attcggggat tgcgacaatg gcgctaccat gttggtaagc ccggtcaacc
      661 gaggtctgga tcaacaaagg gctcacaaac ggccgagctc cgtcatgaat gaccacgaca
      721 tcgacgtttt cgccaagaca acgaaagcct gccgttaccg agcgttgccg tgtctcagcg
      781 ccagccacga tgtgggcgac cttgcggaag cgttccgcgg caacgatttc ctcagcacaa
      841 tacgcctcac gccctgctgg gacgatcacc acaacgcgat cgatgctggg ggtggcttca
      901 aaacaggcca gcgtgtgcgc cagaaggggt ttccccgcca cttgcatgaa ctgcttctcg
      961 acgccacatc ccatgcgccg cccgcggcct gctgcaggaa tcaacgctgc agcgatcatc
     1021 gccccaccct gctttccagg ttttcctcac gctcaaaatc gtcccttagg cctgtaaaaa
     1081 tcattcgacc cgcagtggtt tggagcacac tggtcaccgc cacatcgacg ttcttgccca
     1141 catactttcg ggcgctatcg acgaccacca tggtgccatc atcgaggtaa gcgacccctt
     1201 gaccgtattc ttttccctct ttgaggatat gaacgttcat cagctcccct gggagaacaa
     1261 taggcctgac tgcattcgca agctggttga cgttcaaaac ggggactccc tgcaactctg
     1321 ccactttatt aaggttgaag tcgttggtga gaattttcgc ccctagttgt ttgcccaaag
     1381 ccaccagttt cgagtcgaca tctcgaatct tgggaaagtc ttgatcgagg atcttgacgt
     1441 cgacttccac actgcgctgg atgcgttgga gaatgtccag gccccggcgg ccacggttgc
     1501 gcttgatcgg gtcagaggag tcggcgatct gctgcagctc gcgcaacaca aattggggga
     1561 taatcagtgt gccctcaaga aaacctgttt cacagacatc cgcgactcgt ccatcgatga
     1621 taacgctcgt gtcaaggagc tttgaattct cttccttagt ctcacctcta aaatgcttct
     1681 tgtactcgtt caggtcgaat tctgctccct tgcgtgcccc taccgcaatc cccatatatg
     1741 ctaaggccac ttgaatgaga ccacgcacgg cgaagccatc cgcgtccccc atcaaaggga
     1801 ggatgaggag ggaggtggtg agaagatgtc caagtagaag tgtgacgatc agccccaaga
     1861 gcccgccgag cagaaccttc ggcggcacct cgcgtactgc tctttcaagc gcaatgaccc
     1921 ctccagccag gaaaatgccc gtagccatcc cgagccacgg catttcctcg ttagcgagct
     1981 ttggaacgcc taagtgataa cctaagaatg ccgctaaaag gacgaacgcg atgcgcagaa
     2041 cacttatccc aatgcccctt acctcctctg cccccctcaa ggggataagg ccatgccccc
     2101 gtcactgtca ccgtcgcaga attgagacag aatatacaaa aaccatacca catataccat
     2161 caatggtcaa ggcaagaagc ctgcaagtcc tcgttaaaac aggttttcga acgccgccgc
     2221 aacggaggtg accgagataa tagtcagggt gcctgcaagg gcactgggcg gccggtttgc
     2281 ttctggaatt acggcttgtt ggaatcccag cttcgccgct tcgcgcaggc gcgcttctag
     2341 atgtggaatg gcgcggacct cccctcctaa gcccacttcc cccatgatca ccgttcgggg
     2401 gtcaagggga cggtcacgga agctcgaggc gatggccgcc gcgaccccta agtcaactgc
     2461 aggctctgtg acgcgcatcc ctccggcgac attcaggtag acatcttccc catgcaagtg
     2521 cagcccgaca cgcttctcca gtatggcgat gag
//
LOCUS       DASQSL010001644         1711 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_191317, whole genome shotgun sequence.
ACCESSION   DASQSL010001644 DASQSL010000000
VERSION     DASQSL010001644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191317"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1069
                     /locus_tag="VE844_16730"
     CDS             <1..1069
                     /locus_tag="VE844_16730"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="vanadium-dependent haloperoxidase"
                     /protein_id="HZC02930.1"
                     /translation="YDAVNAIDRRHTVYAVDVKAKPGASIEAAAAVAAYGVLTKLYWF
                     QTPAFDVALETSLAAIPDGPSKTKGIAVGREVAEKFMILRSKDGSNASVIYTPKSGPG
                     VYQLTPPAFAPVVLPHWSGVTPFMLKSANQFDLPGPPALNSVEFAKDFNEVKRLGAKD
                     SSARTRDQTDAARFWTISGVVSDNTVARQLSAQKKLGVVENARLFALLNMVGTDAHIA
                     CWKAKFRYNHWRPITAIHNADSAGNSAIVADPAWEPLLPTPAHPEYPAGHTCYDGAIE
                     HVLQEFSSDKVSFSLTNPAVKVTRNYQSLSQMRKEVEDARVWGGIHYRTAVVHGTELG
                     HKVADYGLKNYLRPVSPSAGK"
     gene            complement(1323..1604)
                     /locus_tag="VE844_16735"
     CDS             complement(1323..1604)
                     /locus_tag="VE844_16735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012728636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HZC02931.1"
                     /translation="MHCPVCKNITLVMADRQGIEVDYCPQCRGVWLDRGELDKIIERA
                     ALAMGTSERQTTQYDRGSGDYREHRDYDDDEYRGKKRKRGFLGELFDFD"
BASE COUNT          361 a          507 c          486 g          357 t
ORIGIN      
        1 ctacgatgcg gtcaacgcca tagaccgccg ccatacggtt tatgccgttg acgtcaaggc
       61 caagcctggc gcatccatcg aagcggcggc ggccgtcgcg gcttacggcg tgctgactaa
      121 gctctactgg tttcagacgc cggccttcga tgtcgcgctc gaaacttcgc tagccgctat
      181 tcccgatggc ccgtccaaaa ccaaaggcat cgcggtcggc agggaggtgg cggagaagtt
      241 catgatcctg cgcagcaagg atgggtcaaa cgcaagcgta atctatacgc cgaaaagcgg
      301 cccgggggtc tatcagctca ccccgcccgc attcgcgccg gtggtgctgc cgcactggtc
      361 aggcgtcacg ccgtttatgc tgaaaagtgc gaaccagttc gatctccccg gcccgccggc
      421 gttgaacagc gtggagtttg ccaaagattt caacgaagtg aagagacttg gggcaaagga
      481 tagttcggcc cggacccgtg atcagaccga tgcggcaagg ttttggacca tttccggggt
      541 ggtgtcggac aatactgtcg cccggcaact gtccgcacag aagaagttag gcgtggtcga
      601 aaacgcccgg ttgtttgcgc tgctcaacat ggtgggcacc gatgcgcata tcgcctgctg
      661 gaaggccaag ttccgctaca accactggcg cccgatcacc gcgattcaca acgcagatag
      721 tgccggcaat agcgcgatcg tggcggatcc ggcctgggag ccgctcctcc ccactccggc
      781 gcacccggaa taccctgccg ggcacacgtg ttacgacggc gcgatagagc atgtcctgca
      841 agagttctct agcgacaagg tcagcttcag cctgaccaat ccggcggtca aagtgacccg
      901 caactatcaa agcctgtcgc aaatgcgcaa agaggtcgaa gacgcacggg tctggggcgg
      961 gatccactac cgcactgcag tcgttcacgg gacggaactt ggtcacaagg tcgccgatta
     1021 cggcctcaag aactacctgc ggccggtcag cccatcggcc ggcaaatgaa tgcccagtgc
     1081 ggcctcggcc tcgttggagt gtgcggtgtt ggcggtttag ccgctccttc cttcgtgcaa
     1141 ggttttggga ccttcgccag ctgaaggcgc taccggccat tgtcgctgag ggtgagccgg
     1201 ttgcgccgtt ggcgagtcca ttgtcgttga gcatgagccg accgcctaac tagaactcgc
     1261 gtcagaagag ccgcttcacc tacttttctg catgtcatca ctgggaaaga gtttgggctg
     1321 catcaatcga aatcgaacag ctcgccgaga aaccctcgct ttctcttttt cccgcggtac
     1381 tcgtcatcat cgtagtctcg atgttcacgg taatctcctg agccacgatc gtactgtgtc
     1441 gtctgccttt cggatgttcc catcgcaagc gctgcacgct cgatgatctt atcgagttcg
     1501 ccgcggtcaa gccaaacacc acgacattga ggacaatagt ctacctcaat gccttgtcga
     1561 tctgccatga ccagcgttat gttcttacat actgggcagt gcatagatta acctcctaag
     1621 tacagctcca cacaataaag gggacaaact catgcagcca atttgagtgg ggcatcggcc
     1681 atgattttag ctaccgattt tgatgaccag t
//
LOCUS       DASQSL010001645         1053 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_199055, whole genome shotgun sequence.
ACCESSION   DASQSL010001645 DASQSL010000000
VERSION     DASQSL010001645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199055"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..577
                     /locus_tag="VE844_16740"
     CDS             <1..577
                     /locus_tag="VE844_16740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016876472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HZC02932.1"
                     /translation="VVAVGIGTVGAERLSGAAEGATSTQAAPLAVAARQFPLPFSSHV
                     LAIDAVTAMLGVLLNLILGLSRVLLAMGRHHDMPVILARLNEAETTPYWAVLVVGVVI
                     AGLVLIGNVKTTWSFSAFTVLIYYALTNGAALRLLAEQRLYPTWVAGLGLLACLFLAF
                     WVERQIWLIGLGLIAAGLVWHAVARWRREAS"
BASE COUNT          216 a          274 c          305 g          258 t
ORIGIN      
        1 agtggtggcg gtcggcattg gaaccgttgg ggccgagagg ctgagcggag cggcggaggg
       61 tgcgacgagc acacaggccg caccgctggc cgtggccgca cggcagtttc ccctaccttt
      121 cagttcgcac gttctggcga ttgatgccgt tacagccatg ttgggcgtgc tgctcaactt
      181 aattctggga ctgtcacgcg tgctgttggc gatgggccgc caccacgata tgccggttat
      241 tcttgcgcgc ctcaatgaag ccgagacgac accttactgg gccgtgctgg tggtgggtgt
      301 ggtcatcgcg ggcttggtgc tgatcggcaa cgtgaaaacg acgtggtcat ttagcgcgtt
      361 taccgtcttg atctactatg ctctgaccaa tggggcggcg ctgcggctac tggcggagca
      421 acgcctctat ccgacttggg tcgcgggatt gggcttgctg gcgtgtctct ttctggcgtt
      481 ctgggtagag cggcagattt ggctgattgg tttaggactt attgccgccg gtctcgtgtg
      541 gcacgcggtg gcgaggtggc ggcgcgaggc ttcatagcgc caagccgacc aacatcggcc
      601 caaccaggcg ctgcaccgga ctgcctacag cttcggcttt ggtcgctacg ctcctgtcgc
      661 ctgcacttcc ggcagccggt gagctttagc gttcggcggc acggctgtaa tcgtggaatg
      721 acgtttcgat gagggcaaca agatgaataa atcagagatg ataagctcta tagctgactc
      781 tgattttcct aacggagtca ccttgagcaa aaaatagtca atcaacctca agcctagacc
      841 ggccgttact ctctacattt gtcaagcccc agcttatcca cagcttctgt ggataattga
      901 tttggtaacg taacctaatt caatcaagct gattgcgtta ctaattcacc ttgaatgtgc
      961 aacgtattca tctttaaacg caaacagaca tcgtctacac tgctcttgat tatgtaacag
     1021 aaatcaaact actgtgtaac aaaatcaagc gag
//
LOCUS       DASQSL010001646         1482 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_67053, whole genome shotgun sequence.
ACCESSION   DASQSL010001646 DASQSL010000000
VERSION     DASQSL010001646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1482
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67053"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            249..1334
                     /locus_tag="VE844_16745"
     CDS             249..1334
                     /locus_tag="VE844_16745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014435016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZC02933.1"
                     /translation="MQGASVELRAIGKSFDGHPAVVDVTLAVERGEFFSLLGPSGCGK
                     TTLLRLIAGFEIPSCGEILLDGAPVTGLPPRHRPLNLVFQHYALFPHMTVYKNVAFGL
                     EMLKLPQAEIDQRVRQVLDLVHLSGLEKRYPKQLSGGQQQRAALARAIVTEPPVLLLD
                     EPLGALDLKLRKAMQLELKNLQRRLGLTFIHVTHDQEEALAVSDRLAVMYAGRVLQIG
                     TPEAIYEHPKSRFVADFIGEANLFEGEVKALAGAYARVAVNGVEFNACVRSEAVSAGS
                     PVLLTLRPEKIALDRQPLAEGDNSFLGRIEDTVYLGTDTRYTVRLGDRLRVTVRRQNH
                     TGERLARGESVYLSWSALSSHLLPPEA"
BASE COUNT          291 a          444 c          423 g          324 t
ORIGIN      
        1 ggcgacagca gtaaggcgca catggatact attcctacag atttcgacaa tttcttgaaa
       61 ttcattctat ggaatgatga cttcttcata aatagcggat tagacactct atatccattc
      121 tagagttaca caaaatacag gggataccca tctcttgcca taaccttcaa cctctgccac
      181 actgccgcac cagctaagtt ttcgcttcgg attctaagtt ccacgacgac tttgggatag
      241 atacatggat gcaaggcgca tcagttgagt taagagctat cggcaaatcc ttcgacggtc
      301 accccgccgt ggtagatgtg accctcgcag tcgagcgcgg cgagttcttc tctttgctcg
      361 gaccgagcgg ctgcggtaag accaccttgc tgcggctcat cgccggcttt gagatcccaa
      421 gctgcgggga gatcctgctc gacggcgcgc cggtgaccgg cctacctccg aggcaccgcc
      481 cgctcaatct cgtgtttcag cattacgccc tgttccccca catgactgtc tacaagaacg
      541 tggcctttgg cttggagatg ctgaagctgc cccaggccga gattgaccaa cgggtccggc
      601 aggtgctcga tctggtgcac ttaagtggcc ttgaaaagcg ctacccgaaa cagctctcgg
      661 gggggcagca gcaacgcgcg gcgctggccc gtgcgatcgt gacagaacca ccggtgctgc
      721 ttttggatga acccttgggg gcgcttgatc tcaaactgcg taaggccatg cagctggaac
      781 tgaagaacct gcagcgccgc ctcggtctca ccttcattca tgtcacccac gatcaggagg
      841 aggccttggc cgtctcggac cggctcgcgg tgatgtatgc cggccgagtg ctccagatcg
      901 gcacgcctga agcgatctac gagcacccca aaagccgttt tgtcgccgat ttcatcggtg
      961 aggcgaacct gttcgagggt gaggtgaagg cgctggcggg agcttatgcg cgggtcgcag
     1021 tcaacggtgt cgaatttaac gcctgtgtgc gctctgaagc ggtgagcgcg ggttccccgg
     1081 tgctgctcac cctccgcccc gaaaagatcg cacttgatcg gcaacctcta gccgaaggtg
     1141 acaatagttt tttaggacgg atcgaggaca cggtctatct cggcaccgat acgcgctata
     1201 ccgtgcggct cggcgaccga ctccgagtca ccgtgcgccg acaaaaccat accggcgagc
     1261 gcctcgctcg aggtgagtcg gtttatctca gctggtccgc tctcagcagc cacctgctcc
     1321 ctcccgaggc gtaacgctcc gcatggcgac cctgcttggt ggcagatgga gcgcactggc
     1381 actgatgccg gctgcggttt ggctcagttt attctttctc gtgccccttc tcatcgtcgc
     1441 cctcatcagc gggatgcgcg tcggatcgcc ggtggagtgg ag
//
LOCUS       DASQSL010001647         1298 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_106211, whole genome shotgun sequence.
ACCESSION   DASQSL010001647 DASQSL010000000
VERSION     DASQSL010001647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1298
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106211"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..828)
                     /locus_tag="VE844_16750"
     CDS             complement(<1..828)
                     /locus_tag="VE844_16750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010307195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein T"
                     /protein_id="HZC02934.1"
                     /translation="MYTRIRKSPYFYAHKRHGVQSYSVCNRQYHPRHYDDPIAEYWKL
                     VNDVTLWDVAVERQVEITGPDAFAFTNMLTPRDLNKCAVGQCKFALNTDVDGGIINNP
                     VLLRLGENHFWLSVADGDVLLWAKGIASVLDLDVQIREPDVAPVQIQGPKSRDLMLDL
                     LGEKILDIKYYWMAEYELDGMDVVVSRTGYSGEVGYEIYLRNASRDGMKLWDKVLEAG
                     KPHNLAVIGPCQIRRVEAGILSYGSDIALDNNLLSDYAFLNPFEVGLEYTVELDQEAD
                     "
BASE COUNT          274 a          379 c          374 g          271 t
ORIGIN      
        1 gtcagcttcc tggtcgagct ccactgtgta ttccaacccc acctcgaaag ggttcaggaa
       61 cgcgtaatcg ctcaagaggt tgttgtccag tgctatgtcg gatccgtagc tgaggatacc
      121 ggcttccacc cggcggatct gacacggccc gatcaccgcg aggttgtgag gcttaccggc
      181 ctcgagcacc ttgtcccaga gcttcatacc gtcgcggctg gcgtttcgca ggtagatctc
      241 gtaccccacc tcgccggaat atccggtccg ggagacgacg acgtccatgc cgtcgagctc
      301 gtactcggcc atccagtagt acttgatgtc caagatcttc tcgcccaaga ggtccaacat
      361 aaggtcccta gacttcggac cctgaatctg aaccggcgcc acgtcgggct cccgaatctg
      421 cacgtccaga tccaaaacgc tggctatgcc cttggcccac aaaagtacgt cgccgtcggc
      481 cacagacagc caaaagtggt tctctcccag acgcagcaac accgggttgt tgatgatgcc
      541 gccgtcaacg tcggtgttga gcgcgaactt gcactgcccg acagcacact tgttcagatc
      601 gcgcggcgta agcatgttgg tgaaggcgaa ggcgtcggga ccggtgatct cgacctggcg
      661 ttccacggcc acatcccaaa gcgtgacatc gttgacgagc ttccaatatt cggcgatggg
      721 atcatcgtaa tgcctgggat gatactgacg gttgcagacg ctgtaagact ggacgccgtg
      781 gcgcttgtga gcataaaaat agggggactt gcggatccgc gtgtacatgt ggatccttgg
      841 ggtgtcatag ggtatgtgca agagagctcc tcctcaccgg atcgccgtaa tttcgtttat
      901 ctctgcctcc aaatcctctc cttatgatcc cgaaaaccta tcacgtatcg aatctatgcg
      961 caaccatggt tgctatatat gcaccactgc aagttgggac tctcggcgcg cgagcccggg
     1021 cggcaagaag ctccacgagg cgcagcggca agagtccggc taggtggcag aaaaaccggg
     1081 ggtatggcct agcacctcga gcgttgatat ctagccgcca aggttatggt caaagccgct
     1141 cttccctcac cgtatacaat cgcaggagcg gtcgaggggt ctctagcaag gagttttcgg
     1201 atgggcgcgt acccgattcg ggtgatgagc ttcaacgtcc ggggctcgtt tcgcgacagg
     1261 ggcaaggcca acgcctggga gaaccgcgcc gatgtgaa
//
LOCUS       DASQSL010001648         3097 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_26029, whole genome shotgun sequence.
ACCESSION   DASQSL010001648 DASQSL010000000
VERSION     DASQSL010001648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3097
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26029"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..775)
                     /locus_tag="VE844_16755"
     CDS             complement(<1..775)
                     /locus_tag="VE844_16755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hopanoid biosynthesis-associated RND transporter
                     HpnN"
                     /protein_id="HZC02935.1"
                     /translation="MLYNAAVVIESFLGRWHKLIQHWALWIVLLILLLAGAGVYYVIE
                     NLSINTDTADMLSEKLPWRVAYSRYQQAFPQYSDTMVIVIDADTPDRAQDASLLLAWY
                     LKKQTTLFQDVYQIENSPFFRKNQLLYLSTEELQDLADNLAKVQPFLGKLVHDQSLRG
                     FFTVLSEAITELSKGEEYELGSAFEKIDETLKAHAQGQRHHLSWQEMMSGRESGKNDR
                     RALLIVKPYLDFSRLFPAEPAVTAIRGLARRLGLMPANGI"
     gene            958..2619
                     /locus_tag="VE844_16760"
     CDS             958..2619
                     /locus_tag="VE844_16760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017365930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZC02936.1"
                     /translation="MYLAHFGFREPPFALTPDPYFLYMSRRHREGLAHLLYGLEEGGG
                     FVQLTGEVGTGKTTLGRCLLQQIPENVDVAYVLNPRLTAIELLATLCDQLKIRYPAKP
                     TQKVVVDALYTHLVKAHEHGRRTVLIIDEAQNLSCDILEQIRLLTNLETTTKKLLQII
                     LIGQPELVKLLDRKDLRQVAQRITARYHLLPFSEGETKAYIKHRIEIAGGNPNLFPPA
                     VCRLIHRYAKGIPRLINVFCDRALLGAFVQDKATIDTKTVKRAVAEVMGMNHHPLGLR
                     IGPWRTAVAALAITGMLGGTGIWWLTGHSGPLVTHQSSTPSPKTPRPTIEPAVTVKAT
                     EPPASKQSVATPVSLISLLSDPALRTDQQSALDGLVGLWRLSNYTPVAGDTCKDVRIY
                     GLQCLWRRGDWHNLRVLNLPVVIELLAADGSTRYTILDTLGETRATLIIDGKPYTYPL
                     QEIEPLRSGRFIALWKPPAFITTPIRPGSKGLNVVWLRHRLSAFDGIPIDTEHPELFT
                     EELRKRVVSFQQDHLLIPDGIVGQETVLHLVSEGNAPELPKLNRS"
BASE COUNT          718 a          854 c          825 g          700 t
ORIGIN      
        1 ggatgccgtt tgcgggcatc agcccgagtc tcctcgcgag tccccggatc gccgtgacgg
       61 caggttcggc cgggaataat ctgctgaagt caaggtaagg tttgacgatc aggagggcgc
      121 ggcgatcatt cttgcccgac tcgcgcccac tcatcatctc ttgccaggag aggtgatgac
      181 gttggccttg ggcatgggcc ttcagggttt cgtcaatctt ctcaaaggca gagcctaatt
      241 catactcttc tcccttgctc aactcggtga tggcttcact cagtacggta aaaaatcccc
      301 gcaggctctg gtcatggaca agcttgccca gaaacggctg gaccttggcg agattatccg
      361 ccaagtcttg cagttcttcc gtgctgagat agagcaattg gttttttctg aaaaacggcg
      421 aattctctat ctgatagaca tcctggaaga gggtcgtttg ctttttcaga taccatgcta
      481 agagaagact cgcatcttgg gcccggtctg gggtgtcggc atcgatcaca atgaccatgg
      541 tgtcagaata ttggggaaag gcctgctgat aacggctata agccacacgc cagggcagct
      601 tttccgacag catgtcggcg gtgtcggtat tgatactcaa attctcgatg acgtaataaa
      661 caccggcgcc tgcgagcagc aggatcagga gcacgatcca cagggcccag tgctggataa
      721 gcttgtgcca gcgacctagg aagctttcaa tgacaacggc agcgttatat agcacgggct
      781 ttagtaagtg attaaatgag gcggagggta gctagagcga agttccatgg gtaattttta
      841 tagtccggat cgcacctccc tcgcgcattt tataatggaa ggctattgtc agcaaagggt
      901 tgcaagctaa tatacaccct atatttagaa agttaggcca aagcaatcgg aaaagatatg
      961 tatcttgctc attttggctt cagagagccc cccttcgcgc ttacacccga tccctatttc
     1021 ctctatatga gccgccgcca tcgcgagggt ctggcgcatt tgctctatgg gcttgaagaa
     1081 gggggtggtt tcgtacagct tactggtgag gttggcaccg gaaagactac cttgggccgc
     1141 tgtctattgc agcagatccc cgagaatgtc gatgttgcct atgttctcaa cccgcggctg
     1201 acagccattg agttgttagc caccctctgc gatcagctca agatccgcta tcctgcgaaa
     1261 cctacccaga aggtcgtggt tgacgccctt tacacccatt tagttaaagc ccatgagcac
     1321 gggcgccgca ccgtactcat catcgatgag gcacaaaacc tgtcatgcga tatcctagaa
     1381 cagatccgcc tgctcaccaa cctggagacg accaccaaga aactgctgca gatcatcctg
     1441 ataggtcaac cggaacttgt taaattgctc gatcgcaaag atcttcgcca ggtggctcaa
     1501 cggatcacgg cgagatacca cctgttgccc tttagcgagg gcgaaacgaa agcctacatc
     1561 aaacaccgca tcgagatcgc gggcggcaac ccgaacctct ttccccccgc tgtctgtcgc
     1621 ttgatccaca ggtacgcaaa gggtattccg cgattgatca atgtcttctg cgatcgggcg
     1681 ctcttgggcg cgttcgttca agataaagcc actattgata ccaaaaccgt gaagagagcg
     1741 gttgcggaag tcatgggcat gaaccaccat ccgctcggtc tacgtatagg accatggcgc
     1801 actgctgttg cagctctggc gataacgggg atgctgggag gaacagggat ctggtggctc
     1861 acagggcata gcggacccct ggttactcat caaagcagca ccccatcccc caagacaccc
     1921 cggccgacga tagaacctgc tgtcactgtc aaggcgactg agcctcccgc tagcaaacaa
     1981 agcgtagcga ccccggtaag cctgatatcg ctgttgagtg atcctgccct caggaccgat
     2041 caacaatcgg ccttggatgg gcttgttggg ctttggcggc tgagcaacta tacgccagtc
     2101 gccggtgata cctgtaagga tgttcggatc tacggattac aatgcttatg gaggaggggc
     2161 gattggcata atctccgggt gctaaacttg cctgtggtca tcgaactcct cgcggccgac
     2221 gggagcacgc gttatacgat cctcgacacg ctcggtgaaa cccgggcgac actcattatc
     2281 gacggcaagc cttataccta ccctttgcag gagatagaac cgcttcggtc gggccgtttc
     2341 attgccttgt ggaaacctcc cgcctttatc actaccccga ttagacccgg cagcaaaggt
     2401 ttaaatgtcg tctggttacg gcaccggctc agcgcctttg acggaattcc aatcgatacc
     2461 gagcatcctg agctgtttac cgaggagttg cgcaagcgtg tagtatcgtt tcagcaggat
     2521 cacctgctta tcccagacgg gattgtaggg caggagactg tgctccatct ggtctcggaa
     2581 ggcaacgctc ccgagctacc caagctcaat agatcataga ggtttatttc cacctatgtc
     2641 attcatcctc gaagccctta aaaaggttga ccgcgaacgc catcaggata atgtccctac
     2701 cctcaatact gtgcatagac agggctccga agcaccaaag cggatatggt cgtgggccct
     2761 ggttgcggca ctgctagtca atgccctgat actagcgtgg atgctgagat ccgagccttc
     2821 caatagggtg ggtaataagc ctgttgatac aggcaaggct actaaaccct cctccagccc
     2881 ggatttaggt tcttcaatac ggggggggtc gagccccccg ccttctgtcg accgtccggt
     2941 ccaagaccgg gggactacta cggttgataa gggcaaggcg aaggtcatcc ctcaaacggg
     3001 cagaccctcc agccgatcgg ctcaatccca gtccaccagt cctgcgcgta aacatgacgt
     3061 ccctcatgat ccgatcgctt caccggtgag acgggag
//
LOCUS       DASQSL010001649         1014 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_91975, whole genome shotgun sequence.
ACCESSION   DASQSL010001649 DASQSL010000000
VERSION     DASQSL010001649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91975"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1014
                     /locus_tag="VE844_16765"
     rRNA            <1..>1014
                     /locus_tag="VE844_16765"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          244 a          237 c          344 g          189 t
ORIGIN      
        1 tacaagcggt cggagcagct tcggctgtga cggcgtgctt tttgcagaac gagccggcga
       61 gttactcgtc tgtggcaagg ttaagcgatg agcggagccg tagcgaaagc gagtctgaat
      121 agggcgaatt agtcgcaggc ggtagacccg aaactgggcg agctatccat gggcaggctg
      181 aagcgggggt aagacctcgt ggagggccga accgacctag gttgaaaact gggcggatga
      241 cctgtgggtc ggagtgaaag gctaatcaag ccaggagata tctggttctc tccgaaatat
      301 atttaggtat agcctcgggc tatatgcgtt acggccgtag agcactgctt ggactagggg
      361 ccctaccagg ttaccgactt caggcaaact ccgaagaccg taacgttcca cctcgggagt
      421 cagtgtgcgg gggataaact tcgtacgcga gagggaaaca ccccagacca tcagctaagg
      481 accctaagtg ctagctaagt gggaaacgat gtccgaatgc cgagacaacc aagaggttgg
      541 cttagaagca gccatccttg aaagagtgcg taacagctca ctggtcaagt gttcgagcgc
      601 ggaaaattca acggggctca agctagacac cgaagctgcg gatgcagatc ttcacggatc
      661 tgcgtggtag gagagcgtcc tcgtacgagc gaagcggcgg cgtgagccag ccgtggaggc
      721 gtgggaagtg agaatgccgg catgagtaac gaaagagggg tgagaatccc ctccgccgat
      781 tgcccaaggg ttcctgagta aagttcgtct gctcagggtt agtcgggacc taaggcgagg
      841 ccgagaggcg tagtcgatgg ccaacaggtt gatattcctg taccacgtcg tgtccgctat
      901 gaccgatggg gtgacgagga agggtaaggg aacccaggcg atggtcgtcc tggggcaagc
      961 gcgtagccag tcacggttgg taaatccgcc gtggcgtttt gacgcgaggc gcga
//
LOCUS       DASQSL010001650         5457 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_191423, whole genome shotgun sequence.
ACCESSION   DASQSL010001650 DASQSL010000000
VERSION     DASQSL010001650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 5457)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5457)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5457
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191423"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            26..358
                     /locus_tag="VE844_16770"
     CDS             26..358
                     /locus_tag="VE844_16770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010587452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HZC02937.1"
                     /translation="MGNKLYVGNLGYGLGDSDLERLFTTYGSVRSAQVIKDRDTGRSK
                     GFGFVEMGSDQEAQAAITALNGKEVDGRTLVVNEARPKEGGGGGGRGKGGFGGRDRGG
                     FGGSGRRY"
     gene            complement(528..2801)
                     /gene="clpA"
                     /locus_tag="VE844_16775"
     CDS             complement(528..2801)
                     /gene="clpA"
                     /locus_tag="VE844_16775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012971412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0043335 - protein unfolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HZC02938.1"
                     /translation="MLSKELEVTLNRAFKEACEQRYEFMTIEHLLLALLDNPTAAKVL
                     RACGADLHLLKNDLRLFIKETALLLPPHVDRDTQPTLGFQRVLQRAVFHVQSSGKKEV
                     TGANVLVAIFSERESQAAFFLNKQNITRLDIVNYISHGISKIAEDDPGDEAGGAAEDD
                     SEAPEPSRNALEAFTTNLNYQARLGKIDPLIGRQPEVERTVQILCRRRKNNPLYVGEA
                     GVGKTAIVEGLAKKIVDGEVPEVLAHSTIYNLDLGALLAGTKYRGDFEKRLKSVLAQL
                     KRDLGAILFIDEIHTIIGAGAASGGVMDASNLIKPILASGDLKCIGSTTYQEYRGIFE
                     KDRALARRFQKIDISEPSIEETVKILQGLKSRFEKHHEVKYTYQALRAASELTARHIN
                     DRHLPDKAIDIIDEAGASQRLLPPSRRKKVIGVTEIENIIAKIARIPPKTVSISDKEV
                     LKTLGHDLKRVVFGQEEAIETLVAAIRMSRSGLGDIDRPIGSFLFAGPTGVGKTEVSR
                     QLARVMGIELVRFDMSEYMERHTVSRLIGAPPGYIGFDQGGLLTEAINKHPHAVLLLD
                     EIEKAHPDVYNLLLQVMDHGTLTDTNGRATDFRNIIIIMTTNAGADQISRASIGFSKQ
                     DHSSDSTEVIKRTFSPEFRNRLDAIIQFKPLDAITIAHVIDKFLVDLKAQLDSKKVTI
                     DVDEEARAWLAQHGHDPLMGARPMTRLIQDKIKRPLAEELLFGKLEGGGHVYITVKDG
                     ELALEMEVKETEEVVKS"
     gene            complement(2816..3130)
                     /gene="clpS"
                     /locus_tag="VE844_16780"
     CDS             complement(2816..3130)
                     /gene="clpS"
                     /locus_tag="VE844_16780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006788079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HZC02939.1"
                     /translation="MSQKTHREEGLALQEGRPKLKQPPLYKVILLNDDYTPMEFVVHV
                     LEFFFAKDRDNATRIMLEVHTRGKGICGIYTHEIAETKVAQVNAYSRENQHPLLCTLE
                     QA"
     gene            3305..4906
                     /gene="aceB"
                     /locus_tag="VE844_16785"
     CDS             3305..4906
                     /gene="aceB"
                     /locus_tag="VE844_16785"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012258821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004474 - malate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase A"
                     /protein_id="HZC02940.1"
                     /translation="MITAQPIIAEKLKVRGVISPNYAAILTPEALEFIEALERRFDPR
                     RRELLALRIERQHRFDAGEMPHFLPETKAIREAEWKVAPIPPDLLDRRVEITGPPERK
                     MLINALNSGAKCYMTDFEDSSSPTWETMLDGQVNVRDAVQGTIEYTSPEGKRYTLKDK
                     TATLIVRPRGWHMSEKNVVLNEEPISASLFDFGLFFFHNARALIDKGTAPYFYLPKME
                     SHLEARLWNEVFMFAQKALGIPHGTIRATVLIETVPAAFEMHEILYELRAHSAGLNCG
                     RWDYTFSFIKCFRSHPEFVLPDRGEITMTQHFLRSYSKLLIQTCHRRGIHAMGGMAAQ
                     IPIKNDPEANAIALAKVRADKEREAGDGHDGTWVAHPGLVPLATEIFDKYMPTPNQIH
                     RLLQDVHVSAEDLLRVPEGRITAKGLQGNISAALRYTESWLSGQGSVPLFHLMEDAAT
                     AEISRAQLWQWINYPQGVLEDGRKITIEMFREGLARELEIIHAEVGPEQFVALKFKEA
                     AALLDRLVTTSKLPAFLTLEAYGKL"
     gene            4934..>5457
                     /locus_tag="VE844_16790"
     CDS             4934..>5457
                     /locus_tag="VE844_16790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011345976.1"
                     /note="catalyzes the reversible formation of glyoxylate
                     and succinate from isocitrate; glyoxylate bypass pathway;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase"
                     /protein_id="HZC02941.1"
                     /translation="MMSTENKARKLEQEWAQDPRWRDIKRGYSAADVVRLRGTVPIEY
                     TLAKRGAEKLWKLIHSEDFVSALGALTGNQAVQQAKAGLKAIYLSGWQVAADANSAFT
                     MYPDQSLYPVDSVPTVVRRINNALIRADQIYHAEGNDSIDWYLPIVADAEAGFGGVLN
                     AFELMKHMIEAGASG"
BASE COUNT         1185 a         1442 c         1602 g         1228 t
ORIGIN      
        1 cctctttaac tagaggagtt ccacaatggg caataagtta tatgttggca acctgggtta
       61 cggcctcggt gacagtgacc tggaaaggtt gttcacgacc tatggcagcg tacgctctgc
      121 gcaggtgatt aaggatcgtg acacggggag atctaaaggg ttcggctttg tggagatggg
      181 cagcgaccag gaagcgcaag cggccattac cgcactcaac ggcaaagagg tcgatggccg
      241 gaccttggta gtcaatgagg cgcgccctaa ggaaggtggg ggtggcggcg gacgcggaaa
      301 ggggggcttc ggcgggcgag accgcggtgg cttcggtggc agcggacgcc ggtactagcc
      361 cagtgcggct taccccaagc ctctttgtgt cttgagcgct gcacctaata gctatgaggc
      421 tccctctagc attatatctt tcatatagag cgggagggta tcaagcttgg agacagtata
      481 tgctttactt aatccggctt gtgttcaaaa ttgggaaaga ttaggggtta gctttttacc
      541 acttcttcgg tctccttgac ctccatctcg agcgcaagct caccgtcttt gacggtgatg
      601 tatacatgac cgccgccttc aagtttgcca aagagcagtt cttcggccag cggccgcttg
      661 attttgtcct ggatcaaacg cgtcatagga cgcgcgccca tcaagggatc gtgcccatgt
      721 tgcgctagcc aagcccgcgc ttcttcatcc acgtcgatgg tgaccttttt gctgtcaagc
      781 tgggccttga gatccaccag gaatttatcg atcacatggg cgatggtgat ggcatcgagc
      841 ggtttgaact ggatgatcgc atctagccga ttacggaact cggggctgaa ggtccgtttg
      901 attacttccg tcgagtcgct gctatggtct tgtttgctaa agccgatcga ggcgcggctg
      961 atctggtccg caccggcgtt ggtggtcatg atgatgatga tgttgcggaa atcggtcgcg
     1021 cggccattcg tatcggttaa agtgccgtga tccatgacct ggagaagcag gttgtagaca
     1081 tccggatggg ccttttcgat ctcatcaagg agcaatacgg catggggatg tttattgatg
     1141 gcttcggtca aaagcccccc ttggtcgaac cctatatacc ccggcggtgc tccaatgagg
     1201 cgcgatacgg tgtgccgctc catatattcg gacatatcaa aacgcacgag ctcgatcccc
     1261 atcacccggg ccaattggcg gctgacctcg gtcttgccca caccggtcgg gccggcgaaa
     1321 agaaatgaac caatcggacg atcaatatcc ccaagtcctg aacgtgacat gcggatcgcg
     1381 gctaccaggg tctcgatcgc ctcctcctgg ccgaagacca cccgtttgag atcgtggccg
     1441 agggtcttca agacctcctt atcggagatg gataccgtct tcggcgggat gcgggcgatc
     1501 ttggcgatga tattctcgat ctcggtgacg ccaatgacct ttttccggcg tgaaggcggc
     1561 aataggcgtt gacttgcccc ggcctcatcg atgatatcga tcgccttgtc cggcagatgg
     1621 cggtcgttga tatggcgagc cgtcaattcc gacgccgccc ggagcgcctg gtaggtgtat
     1681 ttcacctcat gatgtttctc aaaccgggat ttgagccctt ggagtatctt cacggtttcc
     1741 tcgattgaag gctcgctgat atcgatcttc tggaaacgac gggcgagcgc ccggtctttc
     1801 tcgaagatac cgcggtattc ctgataggtg gtcgaaccga tgcatttaag atcaccggaa
     1861 gccaggatag gcttgatcag gttcgaggca tccatgaccc cgcccgaggc agcgcctgca
     1921 ccgataatgg tatggatctc gtcgataaag aggatcgcgc cgaggtcgcg cttgagctgg
     1981 gcaaggacgc ttttcaggcg cttttcaaaa tctccccggt atttggtgcc ggccaacaag
     2041 gcaccgagat cgaggttata gatcgtacta tgagccagca cttcagggac ttcgccatcc
     2101 acgatcttct tggccaggcc ctcgacaata gccgtttttc caacacccgc ctcacccaca
     2161 tacaggggat tattcttgcg tcggcggcag aggatctgga cagtgcgctc aacctccggc
     2221 tggcggccga tgagcggatc gatcttaccc aggcgcgcct ggtagttgag attcgtggta
     2281 aaggcttcca gggcgtttct gctaggctcg ggggcttccg agtcatcctc ggccgcgcct
     2341 ccggcctcat cgcctggatc gtcttcagcg atcttggaga tcccgtggga gatgtaattc
     2401 actatatcaa gccgagtaat attctgcttg tttaagaaaa aggccgcttg ggattcgcgc
     2461 tcgctgaaga tcgccaccag cacgttggcg ccggtgacct ctttcttgcc tgacgactgg
     2521 acatggaaca cggcacgctg gagcacccgc tggaacccga gcgtaggctg cgtatcgcgg
     2581 tcgacatggg gagggagcaa gagtgcggtc tccttgatga acaggcgcag atcgtttttg
     2641 agcagatgaa gatcggcgcc acaggcgcgt aggaccttgg cagcggtggg attgtcgagc
     2701 aaggctagca gcaaatgctc gatggtcatg aattcatagc gctgctcgca ggcctctttg
     2761 aaggcgcggt tgagtgtgac ctcgagctct ttacttaaca cttagctatc ctctcttaag
     2821 cttgttcaag ggtacacaga agcggatgtt gattttcgcg tgaataggcg ttgacctggg
     2881 ccaccttggt ctcggctatt tcatgggtat atataccaca aatgcccttg ccgcgggtat
     2941 gcacctcgag catgatccgc gtggcgttgt cgcgatcctt ggcaaagaaa aattcgagca
     3001 catggaccac aaactccatc ggggtatagt cgtcgtttaa cagaatgact ttatacaagg
     3061 gcggttgctt aagcttcggc cggccttctt gcagcgcgag accttcctca cggtgcgtct
     3121 tttgtgacat ggctgtattt ttgcaatatg ggtaacaacc tctagttgat aattatacgt
     3181 ggctgcttgg cagtttccag aggtaaatgc aagcagcatt cacagagaag actattgtta
     3241 attgttgcac tgcaatgtac agtagtttta tcatgctaaa atttattaac cgatagagat
     3301 atttatgatc accgctcagc caatcatcgc agagaaactt aaggttcgcg gcgtgataag
     3361 cccgaactat gcagcgatct taaccccaga ggcgcttgag tttatcgaag cgctggagcg
     3421 gcgctttgac ccgcgccgta gggaattatt ggcattgaga atcgagcgcc agcatcgatt
     3481 cgatgccggg gagatgccgc acttcttacc ggagactaaa gcgatccgcg aggccgagtg
     3541 gaaggtggcc cctatcccgc cagatctcct cgaccggcgg gtcgagatca cgggtccccc
     3601 cgagcgcaag atgctcatca acgccttgaa ctccggggct aagtgctata tgaccgattt
     3661 tgaggattcc tcaagcccga cctgggaaac gatgctcgat ggtcaggtca atgtgcggga
     3721 tgcggtgcag gggaccatcg aatatacgag ccccgaaggc aagcgctaca ccctcaaaga
     3781 caagaccgca acgctcatcg tccgcccccg cggctggcac atgtcagaga agaatgtggt
     3841 gctcaacgaa gaaccgatct cagcgagctt gttcgatttc ggactgttct tcttccataa
     3901 cgcccgcgcc ctgattgata agggcaccgc cccctacttc tatctgccca agatggaaag
     3961 tcacttggag gcgcgcttgt ggaacgaggt tttcatgttt gctcaaaagg cgctcggcat
     4021 tccccacggt accatccggg ccacggtgct gatagagaca gtgcccgccg cctttgagat
     4081 gcatgagatc ctctacgaat tgcgcgcgca ttcggcgggg ctcaactgcg ggcgctggga
     4141 ttataccttc agcttcatca agtgcttccg cagccatcca gagttcgtcc taccggatcg
     4201 tggcgagatc accatgaccc agcatttcct gcgctcctac tcaaaactct tgattcagac
     4261 ctgccatcgg cgcgggatcc atgccatggg tgggatggcg gcgcagatcc cgatcaaaaa
     4321 cgaccccgag gccaatgcga tcgcgctcgc caaggtgcgg gcggataagg agcgggaggc
     4381 cggtgacggt catgacggca cctgggtggc gcatccgggc ttggtacccc tggccacgga
     4441 gatcttcgat aagtacatgc ctacacccaa tcagatccac cgcctgttgc aagatgtcca
     4501 tgtcagcgca gaggatctct tgcgcgtgcc cgaagggaga atcacagcaa agggattgca
     4561 aggcaacatc agtgcagcat tgcgctacac cgagtcctgg ctcagcgggc agggcagtgt
     4621 gccactcttc catttgatgg aggatgccgc caccgccgag atcagccgcg cgcagctctg
     4681 gcaatggatc aactatccac agggtgtact agaggatggt cgtaagatta caattgagat
     4741 gtttagggag gggttggcac gtgagttaga gattattcac gcggaagtgg gtccagagca
     4801 gtttgtagcg ctcaaattca aggaggccgc agcattgctg gataggcttg tgaccacgag
     4861 caagctgcca gcctttttga ctttggaagc gtatggcaaa ctataacatt ctagatgtga
     4921 gtacaggaga gtaatgatgt cgaccgaaaa caaagcgagg aaactggaac aagagtgggc
     4981 gcaagatccc cgctggcgag atattaagcg cggctatagc gccgcggatg tggtgcggtt
     5041 gcgcgggacg gtgccaatcg aatatacctt ggccaagcgg ggtgcagaga agctgtggaa
     5101 gctcatccat agcgaggatt tcgtcagtgc cttgggcgcg ctgaccggca atcaggcggt
     5161 gcagcaggcc aaggccgggc tcaaggcgat ctatttgagc ggctggcagg tcgcggccga
     5221 tgccaatagc gcctttacca tgtatcccga tcagtcgctt tatccggtcg acagcgtacc
     5281 cacggtggtc cgcaggatca acaatgccct gatccgcgcc gatcagatct atcacgccga
     5341 aggcaacgac agcatcgatt ggtacctgcc gatcgtggcg gatgcggagg cgggttttgg
     5401 cggcgtactg aacgcctttg agctgatgaa acacatgatc gaggccggtg catcggg
//
LOCUS       DASQSL010001651         3186 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_148652, whole genome shotgun sequence.
ACCESSION   DASQSL010001651 DASQSL010000000
VERSION     DASQSL010001651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3186
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148652"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1252)
                     /locus_tag="VE844_16795"
     CDS             complement(<1..1252)
                     /locus_tag="VE844_16795"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HZC02942.1"
                     /translation="MRSLKSLLLTYELAFLFLVVVTSGLSGIWAYRWQQTSVESVRLT
                     GLLATAQRIRSDLFRQIKEVTLARLMEDPQALDLYAEYSRQIDRHFNMLRRRTASRED
                     ELAIQAMQRAYRVIQQDMNKIFTNPYLINRVVRLRILDPRYEQELVGEFEQAFQVFEA
                     LLAKQQRELEETVERSTQGLLVLLPILIVLAMALLVLSRLSLQRGFVRPMATVMLGAR
                     RISEGQLDHKIPVQGTEEMANLAQAINRMAIELARQRDALVESEKQAALGALMPVVAH
                     NIRNPLASIRATAQLLDHADHPEEFREIKQAVVDTVDRLGRWVSTLLSYLHPLKPYRI
                     MVPISSIINNALRLLQPKLEAKGIHVVQANCAEEPGVSVDVDLMEQALYGLLLNAVDA
                     SPSGGRLTIAVKQGADHYTLSIEDQ"
     gene            1406..2446
                     /locus_tag="VE844_16800"
     CDS             1406..2446
                     /locus_tag="VE844_16800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HZC02943.1"
                     /translation="MTQQSSCLVLPATLIRGDGIGPEIMDATLAVLETLGAPFAWEIH
                     KAGMEAMQACGDPLPETTIDSIRRTKLALKSPLTTPVGGGYRSINVRLREIFKLFANV
                     RPARTLVAGGRFEDIDLVLIRENTEGLYVGYEHFIPVDDDPKAVAEAAAIMTRSGCRR
                     IAEYAFDYALRHGRKKVTIVHKANILKALTGLFLETAMAVGQNYADRLQMEDRVVDNC
                     AMQLVINPAQFDVIVTTNMFGDILSDEIAGLVGGLGVAPGANIGKEAAIFEAVHGSAP
                     DIAGQGLANPTALMLAAAMMLDHVGRHACAQRLRGALEQVLREDNIKTRDLGGTASTR
                     DFTQAVIHRLQG"
     gene            2474..2806
                     /locus_tag="VE844_16805"
     CDS             2474..2806
                     /locus_tag="VE844_16805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02944.1"
                     /translation="MNQRFINRIGPLRGMLAVIVLVIIVIAPFAGGESYRSAWEVIRG
                     AVAPALAVILAFVLTLDVLMSLIFMTDQAQVERNRYKLIIGLDLLLLMGVLLAWVPVL
                     ITRLSYYF"
     gene            2903..>3186
                     /locus_tag="VE844_16810"
     CDS             2903..>3186
                     /locus_tag="VE844_16810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017840145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HZC02945.1"
                     /translation="MLTYNIHKGFSMGNTRFVLHQIRDALELANVDLIFLQEIQGNHS
                     GRRSRVQGWPDAPQFEFLASRLWPHYAYGKNAIYHQGDHGNAILSKYPFIS"
BASE COUNT          696 a          905 c          882 g          703 t
ORIGIN      
        1 cctgatcttc aatgctcagc gtatagtgat cagcgccctg cttcacagct atcgtcaagc
       61 ggcccccaga cggcgaggcg tccacggcat tcagcagcaa tccatacagg gcttgctcca
      121 tcaaatcgac gtccaccgat acccccggct cttcagcgca gttggcttgc acaacgtgaa
      181 tgcctttggc ctcgagcttc ggctgcaata gccgcagagc attatttatt atagaactta
      241 tgggcaccat gatccgatag ggtttcaagg gatgcagata cgataaaagc gtgctgaccc
      301 agcgtcccaa acgatcgacg gtgtccacga cggcctgttt tatctcacgg aattcctcgg
      361 gatggtcagc atgatcgagc aactgggcgg tagcgcgaat gctggctaag ggattgcgga
      421 tattgtgcgc caccaccggc attaaggccc cgagcgccgc ctgtttctcg ctctcgacca
      481 gcgcatcccg ttgcctggca agttctatcg ccattcggtt gatcgcttgc gccagattgg
      541 ccatctcttc ggtaccctgg accggtattt tatgatccaa ttgcccctcg ctgatccgcc
      601 gggcgccaag catgaccgtg gccatcggcc gcacaaaacc gcgctgtagg ctcagccgcg
      661 ataaaaccaa gagggccatc gccaaaacga tcaggatggg tagcagtacc agcaagccct
      721 gcgtggatcg ctctacagtc tcctcgagtt cgcgctgttg tttagccagc agcgcttcaa
      781 atacctggaa ggcctgttca aattcaccca ccagttcctg ctcatagcgg ggatccaaga
      841 tccgcagacg cactactcga ttgatgaggt aagggttggt aaagatctta ttcatgtcct
      901 gctggatcac ccgataggcg cgctgcatcg cttggatagc taactcatcc tcacgcgagg
      961 cagtgcgccg ccggagcata ttgaagtggc ggtcgatctg ccgtgaatac tctgcataga
     1021 gatcaagcgc ttgggggtct tccatgagcc gggccaaggt gacctccttg atctggcgaa
     1081 acagatcgct acggatccgc tgagccgtag ccagtaaccc cgtgagccgg accgattcca
     1141 cggaggtttg ctgccaacgg taggcccaga tcccgctgag cccgcttgtg accaccacaa
     1201 gaaacaagaa ggcgagctca taggtgagta ataggctttt aagtgatcgc acggcgagca
     1261 gggtctatta aaactaaaca gacagtatga agactggggt ttcccggtga tactattgat
     1321 ggtaaggtgt gatccaaaaa gagctatctt attaagccat tttagtagaa taccccctgg
     1381 tttgacatga gcgacggtta ccacaatgac ccaacaatcc tcttgcttgg tgctcccggc
     1441 caccttgatc cgaggcgatg ggatcggtcc tgaaattatg gacgccaccc tggcggtgtt
     1501 ggaaaccctg ggcgccccct ttgcctggga gatccacaag gcgggcatgg aagccatgca
     1561 ggcatgcggc gatccgctcc ccgaaaccac catcgacagc atccggcgga ccaagctcgc
     1621 cctcaaaagc ccgctcacca ccccggtcgg cggagggtac cgttccatca atgtccggct
     1681 gcgtgaaatc tttaaactgt ttgccaatgt ccggccggcg cgtacgctcg ttgcgggagg
     1741 ccggtttgaa gatatcgatc tggtgctcat ccgcgagaat accgaagggc tctatgtcgg
     1801 ctacgagcac ttcataccgg tggacgacga tcccaaggct gtggctgaag cggcagcgat
     1861 catgacccgc tccggctgca gacggatcgc cgaatacgcc ttcgattatg cgctccggca
     1921 tgggcgtaaa aaggttacga tcgtgcacaa ggccaatatc ctcaaggcgc tgaccggcct
     1981 ttttctcgag acggcgatgg cggtgggaca aaactacgcg gatcgcctgc agatggaaga
     2041 tcgcgtcgtc gataactgcg ccatgcaact cgtcatcaat cctgcccaat ttgatgtgat
     2101 cgtgaccacc aatatgtttg gggatattct gtccgatgag atcgccgggc tggtaggcgg
     2161 gttgggtgtg gcacctggcg ccaatatcgg caaggaggcc gcgatcttcg aggccgtgca
     2221 tggttcagcc cccgatattg ccggccaggg gcttgcgaac cccacagcgc ttatgctggc
     2281 tgcggcgatg atgctcgatc acgtgggcag gcacgcctgt gctcagcgtt tgagaggcgc
     2341 gctggaacag gtactgcggg aggataatat caagacccga gatctcgggg gcacggcctc
     2401 gaccagggat tttacccaag ccgtcatcca tcgcttgcag gggtaataaa agcttaacct
     2461 gaacaataca ccattgaacc agcggttcat caaccggata ggcccgctcc gaggtatgct
     2521 cgcggtcatt gtgctggtga tcattgtcat cgcacccttt gccggtggag agagctatcg
     2581 atccgcctgg gaggttattc gcggggccgt ggcgcccgcc ttagcggtca tcttggcgtt
     2641 cgtgttgacg ttggacgtcc tcatgagcct gatatttatg actgaccaag cccaggtgga
     2701 acgcaaccgc tataaactca tcatcggctt ggaccttctg ctcttgatgg gcgtgctgct
     2761 ggcctgggtg cccgtgctta taaccaggct aagttattat ttttgacact ccgcttgcgc
     2821 taatacgttt atgagaaagg ccgtattgct aaccccccgt ccacctcagt accgacccga
     2881 ggatgaggga tttcagctgc gcatgctgac ctacaatatt cacaaaggct tcagtatggg
     2941 caacacgcgc ttcgtgttgc accagatccg ggatgcgctg gagttggcta acgtagatct
     3001 catcttttta caagagattc agggcaatca ttcaggacgc agatcccgcg ttcaaggctg
     3061 gcctgatgcg cctcagtttg agttcctagc cagccgctta tggccccatt atgcttacgg
     3121 caaaaatgcc atctaccatc aaggggacca tggcaatgcg atcctgagca aatatccgtt
     3181 tatctc
//
LOCUS       DASQSL010001652         1526 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_199103, whole genome shotgun sequence.
ACCESSION   DASQSL010001652 DASQSL010000000
VERSION     DASQSL010001652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1526
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199103"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1526)
                     /locus_tag="VE844_16815"
     CDS             complement(<1..>1526)
                     /locus_tag="VE844_16815"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020561163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing)"
                     /protein_id="HZC02946.1"
                     /translation="HRRVLYAMKELGNDWNKPYKKSARVVGDVIGKYHPHGEVAVYDT
                     IVRMAQPFSLRYLLVDGQGNFGSVDGDAPAAMRYTEVRMARIAHDLLADIDKETVDFV
                     PNYDGSETEPTVLPARIPNLLINGSSGIAVGMATNIPPHNLTEVINACMALIDQPDLD
                     TDQLIEYIPGPDFPTAGIINGTQGIHEAYRTGRGRIYIRARTVIETYGEEESERIVVT
                     ELPYQVNKARLMERIAELVKEKKLEGIRELRDESDKDGMRMVIELRRGEMSEVVLNNI
                     YEHTQLQTVFGVNVVALVQGQPRILNLKQILECFIRHRREIVTRRTIYELRKARERAH
                     ILEGYAIVLANIDPIIALIKASASPALAKQALIERSWAPGLVIELLERAGAVSKLEGP
                     SHGLTVEGYRLSETQAQAILDLRLHRLTGLEQERIIQEYKDLLETINALLDILTRPER
                     LMQVIREELITIREQFGDARRTEIRTHEVNLRLEDLISEEAVAVTLSHAGYAKAQPID
                     L"
BASE COUNT          319 a          444 c          411 g          352 t
ORIGIN      
        1 agatcaatcg gctgagcctt ggcgtaacca gcgtgggaca gcgtcaccgc cacagcttcc
       61 tctgagatca gatcctcaag cctgagattc acttcatgag tgcggatctc ggtgcgacgc
      121 gcgtcgccga attgctcacg gatagtgatc aattcttccc gaatcacctg catgagccgt
      181 tccgggcggg tcaggatgtc gagcagagcg tttattgttt cgagcagatc tttatattcc
      241 tggatgatcc tctcttgctc gaggccggtc aagcggtgca gcctgagatc caggatagct
      301 tgcgcctggg tctcagacaa gcggtaaccc tccacagtga ggccatgcga tggtccctcg
      361 agcttcgaca ccgctccggc acgttccagc agctctatca ccagacccgg cgcccagctg
      421 cgctcgatca gcgcctgttt agctagagcc gggctcgctg aagccttgat gagggcgata
      481 atagggtcga tattggcaag cacgatggca tacccttcca ggatatgggc ccgctcccgc
      541 gctttacgca actcgtaaat cgtgcgccgg gtcacgatct cgcgacgatg gcggataaag
      601 cactcgagga tctgcttaag attcagtatc ctcggttggc cttgtaccag ggccaccacg
      661 ttgacgccga agaccgtttg cagctgggtg tgctcgtaga tattattgag caccacctcg
      721 ctcatctcgc cccggcgtag ctcgatgacc atgcgcatgc cgtctttgtc agattcatca
      781 cggagctcac ggatcccttc gagttttttc tccttcacaa gctctgcgat ccgctccatc
      841 aaccgggcct tattgacctg atagggcagc tcagtgacga cgatgcgctc gctttcctcc
      901 tcgccatagg tttcaatcac ggtccgtgcc cggatataaa tacgccctcg cccggtacgg
      961 taagcctcgt ggatcccttg ggtaccattg atgatcccgg cggtggggaa atcgggccca
     1021 gggatatatt caatgagctg atcggtatcc agatcaggct gatcgatcaa ggccatacag
     1081 gcgtttatta cctctgtgag attatggggt gggatattgg tggccatgcc cacggcaatg
     1141 ccactggaac cattgatcaa tagattgggg atccgggccg gtaaaaccgt cggttccgtc
     1201 tcggaaccgt cgtagttggg tacgaaatcg acggtttctt tatcgatgtc cgccagcaag
     1261 tcatgggcaa tgcgcgccat gcgcacttcg gtatagcgca tagccgccgg tgcgtcgcca
     1321 tccaccgagc cgaaattccc ctgcccatcc accaacagat accgcagtga aaacggctgg
     1381 gccatacgca cgatggtgtc ataaacagcc acttcaccat ggggatggta cttacctatc
     1441 acatcgccaa caacacgagc ggatttcttg taaggcttgt tccaatcgtt accgagttct
     1501 ttcatggcat acaagactcg gcgatg
//
LOCUS       DASQSL010001653         3580 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_171473, whole genome shotgun sequence.
ACCESSION   DASQSL010001653 DASQSL010000000
VERSION     DASQSL010001653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3580
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171473"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..596)
                     /locus_tag="VE844_16820"
     CDS             complement(<1..596)
                     /locus_tag="VE844_16820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012970640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC02947.1"
                     /translation="MPILIGVNLLTFVLFFVVNRPDDMARMHLGQKRVTEQAIDKWKQ
                     ERGYDKPLLWNASVSGIDRLTDTIFFQKSARLFLFDFGNSDNGRAISYDITQRMWPSL
                     AIAVPTLIVGLLVEITLALFIVLFRATYIDVWSVVLCVIMMSISSLFYIIGGQYLVGK
                     LLHLVPISGYDTGLNALKFIALPVLVGVIGGIGAGTRW"
     gene            complement(629..2821)
                     /locus_tag="VE844_16825"
     CDS             complement(629..2821)
                     /locus_tag="VE844_16825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009206056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZC02948.1"
                     /translation="MKVIGQAIASRYPCHRSLVLLLACLLCACTASPWNNPYSAADAV
                     QNTLYAAFDERPKHLDPVLSYSENEAIFVAQIYEPPLQYHFLRRPYELIPLIATEVPK
                     PTHLDARGQILPDNSPVEEVAYSVYRIAIKPGIYYQPHPAFAKSATGDLLYHALTPAD
                     LASIQTLADFKRTDTRELTAADYAYQIKRMAHPKLHSPIAGLMSEYIVGLSEFAQRLA
                     QAYAELEAQGHRPPFLDLSQFEIEGVKVIDRYTYEIKLKGKYPQFRYWLAMPFFAALP
                     WEAERFYTQAGMQEKNITLDWYPVGTGPYMLIENNPNRRMVLQRNPHFHGETYPLEGE
                     ASDQPMLEDVGKPLPFIDQAIYSLELENIPYWSKFLQGYYDTSGISSDSFDQAIQFGT
                     QGEPELTEAMAEKGLQLLTAVEPSLFYMGFNMLDEVVGGLTERARRLRQAIAIAVDYE
                     EFISIFTNGRGIAAQGPLPPGIFGYKEGAEGINPSVYEWVNGQPRRRSIEAARSVLIE
                     AGYPDGRDTTTGKPLVLHYDTALTGPEAKARLDWLRKQFIKLGLQLDIRATDYNRFQD
                     KMLKGTAQIFEWGWNADYPDPENFLFLLYGPNAKALHQGENAANYQSPDFDRLFERMK
                     SMENTPERQALIDQMVAHVRRDVPWAGGWHPVQYSLYHAWYKNTKPNQMARNTLKYRR
                     LDPPLRARLRAEWNHPVLWPVIVLASLMVVGIVPAVLSYRRRERATAL"
     gene            2918..>3580
                     /locus_tag="VE844_16830"
     CDS             2918..>3580
                     /locus_tag="VE844_16830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018138759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase"
                     /protein_id="HZC02949.1"
                     /translation="MGFLNGKCALIIGVASNRSIAWGIAKAMHREGAELAFTYQNERF
                     KDRVGDLGAKLGSEICIPCEVSSDQEIQQVFGRLHDYWEHLEIVVHAVAYAPREQLEG
                     EYLDTVTREGFRIAHEISSYSFSALAKAARPMMQGRHGALLTLSYLGAVRAMPHYNVM
                     GLAKASLEANVRYMTQSLGPEGIRVNAISAGPIRTLAASGIAGFRGFLDHVEKTAPLR
                     RNV"
BASE COUNT          840 a          946 c         1031 g          763 t
ORIGIN      
        1 taccagcgcg tacccgcccc aatcccgccg atcacgccga cgagcaccgg caaggcaatg
       61 aacttgaggg cattgagccc ggtgtcatag cccgagatcg gcacaagatg cagcagcttg
      121 cccaccagat attggccgcc gatgatgtag aagaggctcg agatcgacat catgatcacg
      181 cagagcacca cactccagac atcgatatag gtggcgcgga agaggacgat gaagagcgcc
      241 aaggtgatct ccacaagcaa ccccacaatg agcgtcggta cggcgatcgc aaggctcggc
      301 cacatgcgct gagtgatgtc atagctgata gcgcggccgt tatcggaatt accaaaatcg
      361 aataaaaaca aacgcgccga tttttgaaag aagatcgtgt cggtgagcct gtcaatcccg
      421 ctgaccgagg cattccacaa taaaggctta tcgtaaccgc gctcttgctt ccatttatcg
      481 atggcctgct cggtcacccg tttttggcca aggtgcatgc gggccatatc atcgggcctg
      541 ttaactacaa aaaacagcac aaaggtcagg agattgaccc caatcaggat ggggatcgct
      601 tagaggaggc gccgaataat ataggcgatc atagggcggt tgccctctcc cgacgccgat
      661 agctcagcac tgccggcaca atacccacca ccataaggct ggcgagcacg atcaccggcc
      721 acaatacggg gtggttccat tccgcccgaa gccgggcccg caatggcgga tcgagacgcc
      781 ggtactttaa ggtgttgcgg gccatttgat tgggcttggt attcttatac caggcatggt
      841 agagactata ctgtacagga tgccagccgc ctgcccaagg cacatcccgg cggacgtggg
      901 cgaccatctg atcgataagc gcctggcgct cgggggtatt ttccatgctc ttcatgcgct
      961 caaacaggcg atcgaagtcg gggctctggt aattggcggc gttttctccc tggtgcaggg
     1021 ccttggcatt ggggccgtag agcaggaata gaaaattctc cggatcggga taatcggcat
     1081 tccagcccca ttcgaagatc tgggccgtgc ccttcagcat cttatcttgg aagcggttgt
     1141 aatcggtggc gcgaatatcg agctggagcc cgagcttgat aaactgctta cggagccaat
     1201 cgagacgcgc cttggcctcc ggacctgtca aggcggtatc gtaatgcaag accagcggct
     1261 tgccggttgt agtgtcgcgt ccgtcaggat aaccggcctc aatgagcacg ctgcgcgccg
     1321 cctcaatcga gcgcctccgg ggttgaccat tgacccattc atagacagag gggttaatgc
     1381 cctcggcacc ttccttgtag ccaaagatgc cggggggaag aggaccctgg gcggcgatcc
     1441 cgcgaccatt ggtaaagatc gagataaatt cctcgtaatc gactgcgatc gcaatcgcct
     1501 ggcgcagtct tcgcgcccgc tcagtcaggc ctccgaccac ctcatcgagc atattgaagc
     1561 ccatataaaa gagcgaaggt tctaccgccg tcaatagctg caatcccttc tcggccatgg
     1621 cctcggtcaa ttccggctca ccctgtgtac cgaactggat ggcctggtca aaactatcgg
     1681 agctgatccc ggaggtatcg taatagcctt gcaggaactt gctccaatag gggatattct
     1741 cgagctccag gctatagatc gcctgatcga taaagggcag tggcttgccc acatcctcaa
     1801 gcatcggctg atccgaggct tccccttcga ggggataggt ttctccgtgg aaatgagggt
     1861 ttctttgcaa caccatgcgc cgattcggat tgttttctat cagcatatag ggaccggtgc
     1921 cgacgggata ccaatcaagt gtgatattct tttcctgcat cccggcttgc gtatagaaac
     1981 gctctgcttc ccagggcagg gcagcaaaga aaggcatggc caaccaatag cgaaattgcg
     2041 gatacttgcc cttaagctta atctcatagg tatagcgatc gatcaccttg acgccttcga
     2101 tctcaaactg agatagatct aaaaagggtg gccggtgacc ttgggcctcg agctctgcat
     2161 acgcctgagc caagcgttgg gcgaattcac tcagtcccac aatatattcg ctcatgaggc
     2221 cggcgatggg ggagtggagc ttggggtgcg ccatgcgctt gatctgatag gcataatcag
     2281 cggcagtcag ttcccgtgtg tcagtccgct tgaaatcggc aagcgtctgg atggaggcca
     2341 gatcggcggg tgttaaggca tgataaagaa gatcaccggt cgctgatttg gcaaaggcag
     2401 gatgtggttg atagtagatg cccggtttga tagcaatccg gtaaacactg taagccacct
     2461 cctccaccgg actgttatcc ggtaatattt gacctctagc gtccaagtgg gtcggtttag
     2521 gcacctcggt ggcgattaac ggaataagct cataggggcg cctcaaaaaa tggtattgta
     2581 acggaggttc gtagatctgg gcgacgaaga tggcctcgtt ctcgctgtag gacaataccg
     2641 gatccagatg tttggggcgc tcgtcaaagg ctgcatataa ggtattctga accgcatcgg
     2701 cggcggaata gggattgttc caaggtgatg cagtacaggc gcagagcaag catgccaaga
     2761 gtaacacgag cgagcgatgg cagggatacc tcgacgcaat tgcttgaccg attaccttca
     2821 taggtggtgg attataaacg ctggctagaa tctgtacact gctcgagata agcttaaaag
     2881 cggaaaacaa ctaacctgtt tatggaaaat aggcattatg ggatttctca acggtaaatg
     2941 cgcattgatc atcggggttg cgagcaatcg gtcgatcgcc tggggtatcg ccaaggctat
     3001 gcaccgtgag ggagcggagc tcgcctttac ctatcagaac gaacgcttta aggatcgtgt
     3061 gggcgatctc ggggccaagc ttggatcgga gatctgcatt ccctgcgagg tttcgagcga
     3121 tcaggagatc cagcaagtat tcgggcgcct gcatgactat tgggagcatc tggagatcgt
     3181 ggtccatgcg gtcgcctatg ccccgcggga acaactggag ggtgaatacc tcgatacggt
     3241 aacccgggaa ggatttcgta ttgcccacga gatcagttcc tatagcttct ctgccctggc
     3301 caaggcggca agacccatga tgcaaggccg ccatggcgcg cttctgacct tgagctacct
     3361 gggggcggtt cgggcaatgc cccactacaa tgtaatggga cttgctaagg caagcctcga
     3421 agccaatgtg cgctacatga cgcaaagcct ggggcccgag gggatccggg tcaatgcgat
     3481 atccgccggc ccgatccgaa ccctcgccgc ctccgggatc gcgggatttc gtgggttttt
     3541 agaccatgtc gaaaagacag cgccgttaag gcgcaatgtg
//
LOCUS       DASQSL010001654         1100 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_191457, whole genome shotgun sequence.
ACCESSION   DASQSL010001654 DASQSL010000000
VERSION     DASQSL010001654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191457"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..705)
                     /locus_tag="VE844_16835"
     CDS             complement(<1..705)
                     /locus_tag="VE844_16835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010941482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZC02950.1"
                     /translation="MIQAVDVHRSFGQQQVLTGVNLRVSQGEILVIIGQSGSGKSVML
                     RLLIGLLRPNRGQVLIEDIDITQLSGRQLDQVRERFGMLFQGGALFDSMTVFENVAFP
                     LREKTKLSQAEIAAKAQNMLDSVGLGEMGYKFPAELSGGMKKRTALARALVTNPSIIL
                     FDEPTTGLDPVLSRAIHQLIKDTHSAFGYTAIIVSHEIPEVFDIATRVAVLHEGKIIE
                     EGTPEMILKSANPVIQQ"
     gene            complement(713..>1100)
                     /locus_tag="VE844_16840"
     CDS             complement(713..>1100)
                     /locus_tag="VE844_16840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015744765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC02951.1"
                     /translation="IDALSVMALNPVKYLISPNILAGLITLPLLTAIVDVVGIYGGYL
                     VGVQLLGVGQGIYFGEMADIVTAYDVRIGFWKSLCFGLIISWICCYKGFYTRFGAEGV
                     SKATTEAVVLSSVWILISDYFLTSVL"
BASE COUNT          247 a          326 c          306 g          221 t
ORIGIN      
        1 ctgttggatg acggggttcg cggacttgag gatcatctcc ggagtcccct cttcgatgat
       61 cttcccctcg tggagaacgg cgacgcgtgt ggcgatatcg aagacctcgg ggatttcgtg
      121 actcacgata atagcggtat acccaaaggc gctgtgggtg tctttaatta actgatgaat
      181 ggcacgggag aggacggggt cgagcccggt cgtcggctca tcgaagagga tgatggacgg
      241 gttggtgacc agcgcccggg ctaaagcggt ccgcttcttc atgccgccac tcagttcggc
      301 ggggaacttg tatcccatct cgcccaagcc cacgctatca agcatattct gtgccttggc
      361 cgcgatctcc gcctgggaga gcttggtctt ctcgcgcaac gggaaggcca cattctcgaa
      421 gaccgtcatc gagtcaaaca gcgcaccccc ttgaaagagc atcccgaagc gttcgcgtac
      481 ctgatccagc tggcgaccgg agagttgcgt gatatcgata tcctcaatga ggacttggcc
      541 gcgattcggt cgcaggagcc cgatgaggag tctcagcatg accgacttgc cgctaccgct
      601 ctgcccgatg atgaccagga tctctccttg cgagacccgc aggttaacgc ccgtcagcac
      661 ctgctgttgg ccaaatgacc gatgcacatc gaccgcctga atcatgtctc acctacaaca
      721 ccgatgtcag gaaataatcg ctgattaaga tccacacgga agacagtacg accgcctcgg
      781 tcgtggcctt gctcaccccc tcggcgccga atctggtgta gaaccctttg tagcagcaaa
      841 tccaactgat aatgagtccg aaacacagag acttccagaa accgatccgg acgtcgtatg
      901 cggtcacgat gtcggccatc tcaccgaagt atatcccctg ccccacccct aacagctgca
      961 ccccgaccag gtagccacca tagataccaa cgacgtccac aatggccgtg agcaggggaa
     1021 gggtgatgag tcccgccagg atgttgggac tgatcagata tttgacgggg ttaagcgcca
     1081 tcaccgagag ggcatcgatc
//
LOCUS       DASQSL010001655         1713 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_92014, whole genome shotgun sequence.
ACCESSION   DASQSL010001655 DASQSL010000000
VERSION     DASQSL010001655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92014"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(216..1223)
                     /gene="hemB"
                     /locus_tag="VE844_16845"
     CDS             complement(216..1223)
                     /gene="hemB"
                     /locus_tag="VE844_16845"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018233256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HZC02952.1"
                     /translation="MTRINSLELFPLTRMRRMRRDAFSRHLMREHTLSVDDLIYPMFI
                     IEGKAQREPIGSMPGIERLTIDELIKEAGELRELGIPALALFPVTPLEKKTADAREAY
                     NSEGLIQTAVRALKAEFPELGVITDVALDPFTTHGQDGLIDERGYVVNDATVEVLIQQ
                     ALSHAEAGADIVAPSDMMDGRIKGIREALEGARFVNIRILAYSAKYASNLYGPFREAV
                     GSAASFGQGDKYSYQMDPANSDEAIREVALDIAEGADMVMVKPALPYLDIVYRVKTAF
                     GVPTLVYQVSGEYAMLKAAAQRGWLNEQAVVVESLISCKRAGADAILTYFAKQVAHWF
                     M"
     gene            complement(1407..1613)
                     /locus_tag="VE844_16850"
     CDS             complement(1407..1613)
                     /locus_tag="VE844_16850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020383998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF433 domain-containing protein"
                     /protein_id="HZC02953.1"
                     /translation="MVDEAEIRIPGTRITIELILEKLAAGETIEQILEAHPRLTREAI
                     QAALAFAASALHADVVYPIRQTGA"
BASE COUNT          387 a          498 c          442 g          386 t
ORIGIN      
        1 gtcatcgagc atactctcaa cgagcgggat gaggtccttg gggggtaggc caacccaaac
       61 gcctccccaa acgcctcccc aaacgcctct tccacagccc tgtacgctca ttgccgattc
      121 taagaaatga tctccgccaa tttggccggc gatgcaagcc cgtcagcacg cgcccactgg
      181 cccgtggcct cattgccaat gagaacacga ctttttcaca taaaccagtg tgcgacctgt
      241 ttggcaaagt aggtcaatat agcatccgcc ccggcacgtt tgcagcttat tagggattcc
      301 actaccaccg cctgctcatt aagccaaccc cgttgagcgg cggctttaag catggcgtac
      361 tcgccgctta cctgatagac caaggttggc accccgaatg ctgttttgac ccgatagacg
      421 atatcgagat agggcagagc cggtttcacc atcaccatat ccgcaccttc ggcgatatcg
      481 agggctacct cccggatcgc ctcgtcgcta tttgccggat ccatctggta actgtattta
      541 tcaccctggc cgaagctcgc ggccgatccc acggcctctc ggaaagggcc gtaaagattg
      601 gaggcgtact tggcggagta ggcgaggatc cggatgttga caaatctcgc gccttccagg
      661 gcctcgcgaa ttcctttgat acggccatcc atcatgtccg agggcgcgac gatatcggcc
      721 cccgcctctg catgagacaa cgcctgttga atcaatacct cgacggttgc atcgttgacc
      781 acataaccgc gctcatcgat gagtccgtcc tgcccatggg tggtaaaagg gtccagggcc
      841 acatcggtga tcactcccaa ttccgggaat tccgctttca acgcgcgcac agcggtctgg
      901 atgagcccct cggagttata ggcctcgcgg gcatccgctg tctttttttc gagcggtgtc
      961 acgggaaaga gtgcgagcgc cgggatcccg agttccctca gttcccccgc ctctttaatg
     1021 agttcatcaa tggtcagacg ctcgataccg ggcatggatc caatgggctc ccgttgggcc
     1081 tttccttcga taataaacat cgggtagatc agatcgtcta ccgacaaggt atgttcgcgc
     1141 atgaggtgcc gggagaaggc gtcgcgccgc atgcgccgca tccgggtaag aggaaacaac
     1201 tctagggaat taatacgcgt cattggacta tctcggcaaa gcttgtatga ccgagctatt
     1261 gtacgccata taaatgtcag ccaagagagg ccgactgcag agacttcttc cctagagcaa
     1321 gtaacgattc acgtatgtga gcgaatgtgc ccatctgtgc aactgttcta taacgggttg
     1381 gtctatactc tcgtctgcga ggaaattcat gcgccagtct gtcgtatagg atagacgaca
     1441 tcagcatgca aggcgctggc ggcaaacgcc aatgctgcct ggatagcctc tcgcgtcaaa
     1501 cgagggtgag cctctaatat ttgctcaatt gtctcaccag cagccagctt ctcaagaatg
     1561 agttctatgg tgatacgagt acctggaatc cggatctccg cctcatcgac cacccatagc
     1621 tgtcccgacg aatcttgacg ttctagaagc ggtaatattt gacagctaac tgtgagtaca
     1681 gaatgcctgt cttgtctggc cgtaacacaa gaa
//
LOCUS       DASQSL010001656         1792 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_117127, whole genome shotgun sequence.
ACCESSION   DASQSL010001656 DASQSL010000000
VERSION     DASQSL010001656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117127"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..201
                     /locus_tag="VE844_16855"
     CDS             <1..201
                     /locus_tag="VE844_16855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02954.1"
                     /translation="ERQFTGFLAILSVFTLISVTTDTVKFLVEDFGLPYWVKWLWLVV
                     PTALAIFALVLIVFGKSRDHSR"
     gene            complement(206..1711)
                     /locus_tag="VE844_16860"
     CDS             complement(206..1711)
                     /locus_tag="VE844_16860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006369095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HZC02955.1"
                     /translation="MKGKSNFDYLVVGGGTSGSIIARRLAEDRDTTVCLLEAGPSDEG
                     DRRIFELHNWPKLLGSEFDYDYAIEPQPWGNSQIRHSCARVLGGCSSHNSAIAFLAPE
                     VDLRAWEHRGAAGWGPEGTRPYFQRVLQRVHLEAAPSTNACASAFVEAAQQFGLPLVE
                     FAGQNIREGVGWFRLNKRGPIRQSSSVAYLHSRRKPRNLTVLTETPVFRVLLDDHRNA
                     TAVETAHGLILAEREIIVCCGAFNTPKLLLLSGIGPAKHLRDVGVPVVVDLPGVGERL
                     LDHPEGIILWEAARPVPEESTQFWEVGLFVRTERHLEWPDLMFHFSTTPFDINTKPLG
                     YPTTEQGFCMTPNVTRPRSVGHVRLRSSDPTAPPIIDPRYFTDPEGYDAQVLLAGLKI
                     ARRIAEQPALRPWIKHELAPGLVVQKDDDLCKYMRRTYNTVYHPAGTCRMGSPDDSLA
                     VVDPQLRVRGVGRLRIADASIFPTMIGVNPCLTCMMIGEKCADLVQRPTRY"
BASE COUNT          407 a          505 c          493 g          387 t
ORIGIN      
        1 gagcgacaat tcaccggctt cttggctatt ctctccgtct tcacattaat cagtgttaca
       61 accgatacgg tgaaattctt agtggaggac ttcggtttgc cgtattgggt gaaatggctg
      121 tggcttgtgg ttcctacggc ccttgctatt tttgccctag tccttattgt attcgggaag
      181 tcacgtgacc acagccggtg aggtattaat accgagtcgg ccgctgcaca aggtctgcgc
      241 atttctctcc gatcatcatg cacgtcaggc aggggttcac tcctatcatc gtaggaaaaa
      301 tgctcgcgtc agcgatccga agccgaccca cgccgcgcac acgcaactgt ggatcaacca
      361 cagcgaggga atcgtcggga gatcccattc ggcaagttcc cgcaggatgg tacacggtat
      421 tgtaagtccg gcgcatatat ttgcagagat cgtcatcttt ttggacaacg aggcctggcg
      481 cgagctcgtg cttaatccag ggacgcaggg ccggttgctc ggcaatcctt cgagctattt
      541 tcagtcctgc tagcaatacc tgggcgtcat agccttccgg atcagtaaaa taacgcgggt
      601 cgatgatcgg aggagccgtt ggatcagacg agcgaagtcg aacgtggccg acgcttcgag
      661 gtcgggttac gttcggagtc atgcaaaaac cttgttcggt ggttgggtaa ccaagcggct
      721 tggtattgat gtcaaatggc gtcgtgctga agtggaacat gagatctggc cactccagat
      781 gacgctccgt gcgaacgaag agaccaacct cccaaaactg cgtagactct tccggaacag
      841 gccgtgccgc ttcccacaat atgatacctt ccgggtgatc gagcaaacgc tcgccaactc
      901 caggaaggtc caccacgacc ggaaccccga cgtcgcgcag gtgctttgcc gggccaatac
      961 cagaaaggag cagcaacttt ggcgtgttga aggcaccgca gcaaacaata atttcacgct
     1021 ctgctaggat gagcccgtgt gcggtctcaa ccgccgtggc attacgatgg tcatcgagga
     1081 gaactcggaa aacaggcgtc tccgtcagca cagtgaggtt gcgaggcttc cgacgcgaat
     1141 gaagataggc gacggaacta gactgacgga tcgggccacg tttgttaagt cggaaccagc
     1201 cgactccctc gcggatattc tgtcctgcga actcgacaag tggcaaacca aactgttgcg
     1261 ccgcttcaac aaaagcggat gcgcaagcat tcgttgacgg ggctgcctca agatggacac
     1321 gctggagcac acgctggaaa tagggccgcg tgccctcggg accccagcct gccgcgcccc
     1381 tgtgttccca agctcgcaaa tcgacctcgg gggcaaggaa agcaatcgcc gagttatgcg
     1441 agctgcagcc cccaagtaca cgagcgcagc tgtggcgaat ctggctgttg ccccatggct
     1501 gcggttcgat cgcatagtcg tagtcaaatt cgctacccaa aagctttggc cagttgtgaa
     1561 gctcaaaaat tcgcctatca ccttcgtcgg atggccctgc ttccagcaga cacacggttg
     1621 tatcacgatc ctcagcaagc cggcgtgcga tgatgctgcc ggacgttcca ccaccaacaa
     1681 ccaagtaatc gaagtttgac ttacccttca ttcgacctcc tgcttcattc gaggctgccc
     1741 cggtgcccaa agtctcactc tccgctctaa ggggctgttt gaaaagttca gg
//
LOCUS       DASQSL010001657         1300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_191492, whole genome shotgun sequence.
ACCESSION   DASQSL010001657 DASQSL010000000
VERSION     DASQSL010001657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191492"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(114..>1300)
                     /locus_tag="VE844_16865"
     CDS             complement(114..>1300)
                     /locus_tag="VE844_16865"
                     /EC_number="6.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005960799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003952 - NAD+ synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HZC02956.1"
                     /translation="GAVLILNINASPFHTDKALEREQIVKATVAEGRLPVVYLNLVGG
                     QDELVFDGGSTVMDKNGTICLRAPDFTEGLYTVDFEDKDTVTPLPGACSPPLRGEESL
                     YRALLLGVRDYVRKNGFNGVVLGLSGGIDSALTLVLAVDALGKERVEAVLMPSRYTAK
                     MSVEDACTEVENLGVEYHLIPIEPAFTAFNESLHDTFTDRPPDTTEENIQARCRGVLL
                     MAISNKKGRLLLTTGNKSELAVGYATLYGDMAGGFAPLKDVPKTLVYKLARWRNRIDP
                     VIPERVFDRPPSAELAPDQKDEDALPPYSVLDPILERYIECDQTPEEIIAAGFDPATV
                     IKVARLVDRNEYKRRQAAPGVRISRRAFGRDRRYPITSGYTEVFTPSLALSLDPGGEV
                     RE"
BASE COUNT          260 a          372 c          403 g          265 t
ORIGIN      
        1 tatgccctgg agccgaggga tcgatagcaa agcataaaga agcaaaaggg gccaggctca
       61 ctttatttcg atttacagat ttatctgcac tttcagcaat ccgctgaaaa ggcttactcc
      121 cttacttctc ccccggggtc aagggagagg gcgagggagg gagtgaagac ctccgtataa
      181 cccgaggtga ttggatagcg ccggtcgcgg ccaaaggcac ggcggctgat gcgcaccccc
      241 ggtgccgcct ggcggcgttt gtactcgttg cggtcgacca ggcgggcgac cttgatcacc
      301 gttgccggat cgaagcccgc cgctatgatc tcctcggggg tttgatcgca ttcgatatac
      361 cgctccagga tcggatctaa tactgaatag gggggcaagg catcctcgtc cttttgatcg
      421 ggggcgagct cggccgaggg cggacggtcg aacacccgct ccgggatcac ggggtcaatg
      481 cggttacgcc agcgggcgag cttatagacc agggtcttcg gtacgtcctt taggggcgca
      541 aagccgcctg ccatgtcgcc gtagagggta gcgtatccca ccgccagctc gcttttgttg
      601 ccggtagtaa ggagcagccg gccttttttg ttggagatgg ccatgagcag cacgccgcga
      661 cagcgtgcct ggatgttctc ttcggtggtg tcgggcgggc gatcggtaaa ggtatcgtgc
      721 aggctttcat tgaaggcggt gaaggcgggt tcaatgggga tgaggtggta ttcgacacct
      781 aaattctcca cctcggtgca ggcatcctcg acgctcatct tcgcggtata gcgcgagggc
      841 atgagcaccg cctcgacccg ctcttttccc agcgcatcga cggcgaggac cagcgtcaag
      901 gctgaatcga tcccgcccga gagccccaag accacgccgt tgaagccgtt cttgcgaacg
      961 tagtcccgca ccccaaggag caaggcgcga tagaggcttt cttccccgcg taacggcggg
     1021 gagcatgcgc ctggcagagg cgtaacggtg tccttgtcct caaaatccac ggtgtaaaga
     1081 ccttcggtga aatcgggagc gcgcaagcaa atcgtgccgt ttttgtccat gacggtggat
     1141 cccccgtcaa acaccaactc atcctgaccg cccacgagat tgaggtagac gaccggcagc
     1201 ctcccttctg caacagtagc ctttactatc tgttcccgct ccagggcctt atcggtatgg
     1261 aagggcgagg cgttgatatt gaggatcagc acagccccgg
//
LOCUS       DASQSL010001658         1362 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_148729, whole genome shotgun sequence.
ACCESSION   DASQSL010001658 DASQSL010000000
VERSION     DASQSL010001658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1362
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148729"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..398
                     /locus_tag="VE844_16870"
     CDS             <1..398
                     /locus_tag="VE844_16870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02957.1"
                     /translation="IIPVFPSGYDLKGLETLTRTVDKVQKRFNPKLKLLGVVVGNYDT
                     RAKLDADVLGLLVRKFGQDLVFPMVINRSVRHREATVYGTTIFEHAPGESAAEQYAAL
                     SRELVSRLEATQNAPAQTHVELMEANRRG"
     gene            391..936
                     /locus_tag="VE844_16875"
     CDS             391..936
                     /locus_tag="VE844_16875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02958.1"
                     /translation="MDRKRGLPDSFSLDVPESAIHRPVELGDYLDEENTHPAKKRTRE
                     ESGRNVVEMPMKERREERGEALSRSNPQPQARKAPPKPRRLTTTVLRKQVNMNPETLQ
                     MVDELLEYVRTYSPQRDIRASELFHALVLSLHESRAELDVSEIPPRGRWGTPTAQAFP
                     VGLKNAFRKAIVEDYYRKQQE"
BASE COUNT          332 a          369 c          391 g          270 t
ORIGIN      
        1 acatcatccc tgtctttcct tccggatatg atttaaaggg cctggagacc ctcacgcgta
       61 ccgtggataa ggtgcagaag cgctttaatc cgaagctgaa gctccttggg gtggtggtgg
      121 gaaactacga cactcgggca aagcttgacg cggatgttct tgggcttctc gttcgaaagt
      181 tcggccagga cctcgtcttc cccatggtca tcaaccggag tgtcaggcac agggaggcga
      241 cggtctacgg gacgactatc ttcgagcacg ccccggggga atctgccgcc gaacagtatg
      301 ccgcactcag ccgcgagctc gtctctcgcc tggaagcgac tcagaacgca cctgctcaaa
      361 cccacgtaga actcatggag gcaaaccgcc gtggatagaa aacgtggcct tcccgactcc
      421 ttctcccttg atgtgccaga gtctgcgatt catagacccg tcgaactcgg cgactacctt
      481 gatgaagaga atacacatcc cgcgaagaaa agaacccgtg aggagtctgg aagaaacgtc
      541 gttgagatgc cgatgaagga aaggcgcgag gagaggggag aagcgctctc aaggagtaac
      601 cctcagcctc aggcaagaaa ggccccgcca aaaccacgac gcctgacgac gaccgtcctc
      661 aggaagcagg tgaatatgaa ccctgagacg ctgcagatgg tcgatgagct cctggagtat
      721 gtcaggacct atagcccgca gagagatatc cgggcatcgg agcttttcca cgcacttgtc
      781 ttatccctcc atgaatcacg cgcggagcta gacgtcagtg aaatcccacc tcgtggccgc
      841 tgggggaccc caaccgccca agcgttccct gtcggcctga agaacgcctt tcggaaggcg
      901 attgtcgaag actactaccg aaagcagcag gagtagccaa agtgctgtat tagaaaaccg
      961 tgatgaggct aaaacggttt tttctcttct ttcgccggag agggggaggg aagggacatt
     1021 gcttctcatg agaggctaaa atggcgcttt aatgagggac ctcctgaagc agccattcac
     1081 caacgtttca tctgcagagc attctttgta tggagatcta gaggcacact cactgcctct
     1141 atacctccat agtcagaaaa atggagaaat aacacgattt tcgctctatg cctctataga
     1201 ggcatactcc ctgggagagc gaggagctga gcatggacgc cgagaggatt ggtgtgacgc
     1261 tgacggacca gaactttcag acgatggtgc tggagagccc acaacccgtg ctggtcgcct
     1321 gttgggcgga ggggtgtggc ccctggcatg tgctcgcgcc ag
//
LOCUS       DASQSL010001659         1067 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_106316, whole genome shotgun sequence.
ACCESSION   DASQSL010001659 DASQSL010000000
VERSION     DASQSL010001659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106316"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..127)
                     /locus_tag="VE844_16880"
     CDS             complement(<1..127)
                     /locus_tag="VE844_16880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015281925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02959.1"
                     /translation="MERTQQRAAIDTVILGLGATGLSCARFLAKQGRTFAVTDSRL"
     gene            complement(136..>1067)
                     /gene="mraY"
                     /locus_tag="VE844_16885"
     CDS             complement(136..>1067)
                     /gene="mraY"
                     /locus_tag="VE844_16885"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008176520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HZC02960.1"
                     /translation="QLGQSIRDDGPKTHLAKAGTPTMGGLLILVSILASTLLWADLGN
                     RFVWVALVVTLAFGIIGWVDDYRKIVNKDPIGLPARYKYLWQSIAGLAVACFLYFTAA
                     SMTETQLIVPFVKTVAIDLHWFFIVLCYFVIVGTSNAVNLTDGLDGLAILPTVMVAGA
                     LAIFAYVAGNVKFSSYLGLPYIAGAGEISIFCGSMVGAGLGFLWFNTYPAQVFMGDIG
                     ALALGAALGVVAVMVRQELVLLIMGGVFVMETVSVILQVASYKLVGRRIFNMAPLHHH
                     FELKGWPEPRVIVRFWIITVILVLIGLSSLKIR"
BASE COUNT          284 a          334 c          252 g          197 t
ORIGIN      
        1 caagacggct atccgtcacc gcaaacgtcc tcccttgctt cgccaggaaa cgggcgcacg
       61 acaggccggt agccccaagg cccaagatca cggtgtcaat tgctgccctt tgctgtgttc
      121 tttccataca tctcattatc ggatcttgag gcttgagaga ccgataagca ccaggatcac
      181 ggtgatgatc cagaatcgca cgatcacccg tggttccggc caacctttca gctcaaagtg
      241 atgatgcagc ggcgccatat taaagatccg gcgtccgaca agcttatacg aggccacttg
      301 caggatcacc gagaccgtct ccatcacgaa caccccaccc atgatcaaca ataccagttc
      361 ttggcgcacc atcacagcga ctacacccaa tgccgccccg agcgccaagg ccccgatatc
      421 ccccatgaac acctgcgccg gataggtgtt aaaccataaa aacccgagtc ccgctcccac
      481 catagagccg caaaatatgc tgatctcacc ggccccggca atataaggca agccgagata
      541 gctcgaaaat ttcacattgc cagcaacata ggcaaatatc gccagggccc ccgccaccat
      601 gacggtcggt agaatggcta aaccatcgag cccatcggta agattgactg cattgctggt
      661 gccgacgatg acaaagtagc agagtacgat aaagaaccag tgcagatcga tcgcgaccgt
      721 cttgacaaaa ggcacgatca attgggtctc ggtcatagaa gcggccgtaa aataaagaaa
      781 gcacgccacc gccaatccgg cgatcgattg ccagagatat ttataacggg cgggcagccc
      841 tatcggatct ttattgacga tcttgcggta atcatccacc cagccgatga tcccaaacgc
      901 gagcgttacc actaacgcca cccatacaaa gcggttgccg agatccgccc acaacagcgt
      961 gctcgccaga atcgatacca ggatcagcaa accgcccatg gtcggcgtac ctgccttggc
     1021 aagatgggtc ttgggtccat cgtcgcgtat gctctgcccc agctgat
//
LOCUS       DASQSL010001660         1431 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_148737, whole genome shotgun sequence.
ACCESSION   DASQSL010001660 DASQSL010000000
VERSION     DASQSL010001660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1431
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148737"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..223
                     /locus_tag="VE844_16890"
     CDS             <1..223
                     /locus_tag="VE844_16890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02961.1"
                     /translation="SCSLLKSLDLSQPIGDLSMAEFQNVSPTFGQRCRRILLELFYEL
                     IQTIHRWLEERQMTPTQIFETLFKRLLYV"
     gene            complement(214..>1431)
                     /locus_tag="VE844_16895"
     CDS             complement(214..>1431)
                     /locus_tag="VE844_16895"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02962.1"
                     /translation="GVFPSRKLERATYESVPFIYIAGGLHPDHDSINSFRKGFLVQLE
                     ELFVQILLIAHGLGVLRLGDIFIDGSKVKANASKKAMSWDYANKLEARLKAEVEKLLE
                     LAETATGQENRGLDIPAELARREERLKKIAQAKAEIERRAKERYAREEAQYDEKMARR
                     QAKEKRTGKKPGGRAPKEPELGPHDKDQVNFTDEESPIMPVSGGDFEQAYNGQIGVEG
                     DSRLIVCQHVSPQPNDKQELVPALDQLAHLPQELGQVKTASADTGYYSEDNVIACAKA
                     DVVPYIACGREPHYPPLEERLAGAPQAPENPDPVSALRHRLKTTEGKAHYAKRKSTVE
                     PVFGIIKHVIGFRQFMLRGLKAVQGEWTLVCIAFNLKRLHTLKGVKKAAEVAASMLLS
                     GLTRLFHLATLQT"
BASE COUNT          278 a          443 c          353 g          357 t
ORIGIN      
        1 gtcgtgttca cttctgaaat ccttggacct gagtcaaccc attggggatc tgtcaatggc
       61 cgagttccaa aacgtgtcgc ccacgtttgg tcaacgttgt cgccgcatcc tgttggagct
      121 gttctatgag ttgattcaga ccattcaccg ctggttagag gagcgacaga tgaccccaac
      181 tcaaatcttt gaaacactct tcaaacggtt actttacgtt tgaagggtcg ctaagtgaaa
      241 aagtcgtgta agcccactca acaacatact tgctgccact tcggcagcct ttttcacccc
      301 ttttagggtg tgcaagcgct tcagattgaa tgcaatgcag acgagcgtcc actcgccctg
      361 taccgccttc aaaccccgta acatgaattg ccgaaacccg atcacgtgtt tgataatccc
      421 aaaaaccggc tcgaccgtag atttgcgttt ggcataatgc gccttgcctt cagtcgtctt
      481 caggcggtgg cgcagggcac tcaccgggtc ggggttctct ggcgcctgcg gtgcaccggc
      541 caggcgttct tcgagcggcg gataatgcgg ctcacgccca caggcaatat acggaaccac
      601 atcggctttt gcacaagcga tcacattgtc ttcactgtag tagcccgtat cggcggaggc
      661 ggttttgact tggccgagct cttggggcaa gtgggcgagt tggtcgagag ccggaaccag
      721 ctcttgtttg tcgttgggct gcgggctgac gtgttgacac acaattaaac gactgtcccc
      781 ctccaccccg atctggccgt tataagcctg ttcaaaatca ccaccggata ccggcatgat
      841 gggcgattct tcatcggtga agttgacctg gtctttgtcg tgcggaccca gctcgggctc
      901 tttgggtgcg cgtccacccg gctttttccc ggtccgcttt tccttcgcct gccgccgggc
      961 catcttctcg tcatattgag cctcttcccg cgcgtagcgt tccttggcac gccgttcgat
     1021 ctccgctttg gcctgggcaa tcttcttcag ccgctcttcc cgccgagcca gctccgccgg
     1081 aatatccagc cctctatttt cttgaccagt ggcggtctca gccagctcca gcagcttttc
     1141 cacctcggct ttaagccgcg cttccagctt gttggcatag tcccaactca tcgccttctt
     1201 gctcgcattg gccttcacct tgctcccatc aataaagata tcgcccaatc tcagcacacc
     1261 caaaccgtgt gcaatcagca ggatctgcac aaacagctct tccagctgca ccagaaaccc
     1321 cttgcggaaa ctgttgatgc tgtcgtgatc cgggtgcagg cccccagcaa tatatatgaa
     1381 cggcaccgac tcataggtcg cccgctccag tttgcgactg ggaaacaccc c
//
LOCUS       DASQSL010001661         1027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_36135, whole genome shotgun sequence.
ACCESSION   DASQSL010001661 DASQSL010000000
VERSION     DASQSL010001661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36135"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(165..428)
                     /locus_tag="VE844_16900"
     CDS             complement(165..428)
                     /locus_tag="VE844_16900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02963.1"
                     /translation="MADHGNQSDIPYDWDLTDEDDWDLTDEEPLEKQTQPAPPPETVE
                     VMREKWRDRLADRYSFVFGLVIAALLAALLAAVIGLYFGTLGR"
     gene            complement(438..890)
                     /locus_tag="VE844_16905"
     CDS             complement(438..890)
                     /locus_tag="VE844_16905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02964.1"
                     /translation="MASKEPEHGEARIDYAVEDPANEPLIDLVAEGREETVRSYAERE
                     GVTEAAAKARLMSSARAGAIAALEDKLDAGKQREPGEFRDFVKVTVKLPREIAETLRD
                     LAHERGATVTETLRKAIVNERFFADAMDDGAKVLLEYPGKELRQVIFR"
BASE COUNT          201 a          321 c          268 g          237 t
ORIGIN      
        1 aacgatccga caagaggcgg accacttgaa ccaggttctc agcaaccacc tcgccctggc
       61 gccactgcgg ccaaggtgcg ctcaccccgg ccaaagccca ggagcgatgg atgaggtgat
      121 cgaggccgtg atagcgcggc ctgcggtggg cctctagtgg ctttctagcg acccagagtc
      181 ccgaagtaca agccaatgac ggcggcgagc agcgccgcta aaagagctgc gatcaccaga
      241 ccaaagacga acgaatatcg atcggctaga cggtcgcgcc atttctccct catgacctcg
      301 acggtttctg gagggggagc tggttgcgtt tgcttctcta gtggctcttc gtctgtgaga
      361 tcccagtcat cttcgtctgt gagatcccag tcatagggaa tgtcggactg attgccgtgg
      421 tcggccacga gccccatcta gcggaaaatc acctgtcgca gctctttccc ggggtactca
      481 agcaggacct tggctccgtc gtccatcgca tcggcaaaaa acctctcatt cacgattgcc
      541 ttgcgaagcg tttccgtcac ggtggcgcct cgctcatggg caagatctct cagagtctcc
      601 gctatttccc tgggcagctt cacagtgacc ttcacgaagt ccctaaattc gccgggctca
      661 cgttgcttac ccgcatccag cttgtcttcc aatgcagcga tcgctccggc tcgtgcacta
      721 ctcatcaatc gagccttcgc tgcagcctct gtcacaccct ctctttcggc atagctacgg
      781 acggtctctt cgcggccttc tgccactagg tcgataagtg gctcattcgc tgggtcctcg
      841 acggcatagt cgattctcgc ttcgccatgc tccggctctt tagaagccat ttggcccccc
      901 tccagtacgg cttttatacc gtttatacct ctggagaggt atacggagag acgacatctt
      961 ggcctcgcat atatcgggcc aggggtcgac ttcaagcttt tcgactcgtt cgaactgaga
     1021 taaatca
//
LOCUS       DASQSL010001662         5460 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_67332, whole genome shotgun sequence.
ACCESSION   DASQSL010001662 DASQSL010000000
VERSION     DASQSL010001662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 5460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5460
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67332"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..211
                     /locus_tag="VE844_16910"
     CDS             <1..211
                     /locus_tag="VE844_16910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014750614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="undecaprenyl diphosphate synthase family
                     protein"
                     /protein_id="HZC02965.1"
                     /translation="EPDLFIRTGGERRISNYLLWQLAYTELYFMDCLWPDFGEEHLEI
                     ALDWYATRQRRFGRTSEQIRQAQHA"
     gene            168..1040
                     /locus_tag="VE844_16915"
     CDS             168..1040
                     /locus_tag="VE844_16915"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: protein motif:HMM:NF013327.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HZC02966.1"
                     /translation="MVELANRSDRLNTLKQRLITAALLILTTLAAFMFLPTGMVALVL
                     GVFGALGAWEWAALVGWPSARARLAYVTVCLALLMLAYWLLQLPWLGAGITALVSLWL
                     LGWAVIFYWVIAYQRGRRTVPRSRALQAGVGLLVMVSAWSALVVLHGSFGGGVYLLIS
                     LMLLVWGADTAAFFVGRRWGKHRLADRISPGKTWEGFLGALAATVGIAWICSAPLGLA
                     AFERLLFLLLCLVTVAFSVLGDLLESLLKRLAGVKDSSALLPGHGGILDRIDSMLAAA
                     PVFAIGVSILRIYS"
     gene            1037..2218
                     /gene="ispC"
                     /locus_tag="VE844_16920"
     CDS             1037..2218
                     /gene="ispC"
                     /locus_tag="VE844_16920"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006475412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070402 - NADPH binding [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HZC02967.1"
                     /translation="MIGVTVLGSTGTIGVNTLDVIARHRDRFRVTALTANGDVEGLAE
                     QCRRWLPRYAVMADPDRAQDLRQRLARSYPGVEVLAGREAIFQVASAAETDYVMAAIV
                     GAAGLMPTLAAARAGKRILLANKEALVMSGRILIDAVRQSGAQILPIDSEHNAVFQCL
                     PRGFERGLEDVGVSRILLTASGGPFRKLPLSALRQVTPAQACAHPNWVMGRKISVDCA
                     TMMNKGLELIEACWLFNTTPEKVDVVLHPQSVVHSLVEYIDGSVLAQLGHPDMRTPIA
                     HALAWPERIQSGSEGLDLFEVARLDFERPDVARFPCLRLAREAMSLGGTAAAILNAAN
                     EVAVAAFLAGELNFADIPAVIETTLSHLPSHEAVSLEVILKADACARQNALQTLKTQV
                     S"
     gene            2215..3588
                     /gene="rseP"
                     /locus_tag="VE844_16925"
     CDS             2215..3588
                     /gene="rseP"
                     /locus_tag="VE844_16925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005959114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HZC02968.1"
                     /translation="MMPVLYSILAFILALGILVAVHEFGHFWVAQRLGVKILRFSIGF
                     GRIAWRRQFGPDQTEFAIATIPLGGYVKMLDEREGEVPEAELHRAFNRQPLAYRTAIV
                     FAGPLFNFLFAIVVYWLMFVIGVAGLKPIVGEVIPGSAAERAGFRPGDQIVAVDSQPT
                     PTWNAVLQACIERILDTGEVVMNVRGGGELERELRLALRSSVSLDDVSRGNLTQKLGI
                     KPYRPRFPAVIGEVMAGGAAARAGLRPGDRILRADGQPIEYWDTWVEYVQARPERLIQ
                     VEIWRANERVVLDLTPDRIEQEGSAIGRIGASVAAPEGLEQELLAVEQYNPLTAFTLA
                     VRKTGDLSWFTLQILGQMLAGQASLQNLSGPISIARYAGESASIGLVAFLAFLGLISV
                     SLGVVNLLPVPLLDGGHLLYYLIEFISRKPVSETAQIVGQQIGLVILLGLMGLALYND
                     IMRLLFN"
     gene            3607..>5460
                     /gene="bamA"
                     /locus_tag="VE844_16930"
     CDS             3607..>5460
                     /gene="bamA"
                     /locus_tag="VE844_16930"
                     /inference="COORDINATES: protein motif:HMM:TIGR03303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HZC02969.1"
                     /translation="MYRLLKKLGYTVFLFVLWPSSAVAKDSFIVKDIRVEGLERISPG
                     TVFNYLPIRVGDEFDASRSAEAVRALFKTGFFRDVRLEREGDVLVVIVSERETIAEIT
                     VTGNKDIGTEDLLEGLKKIGFAEGGVFDRSLLDKVEQELRRQYFSQGKYGVKLDSQVK
                     KLGANRVAVTIAITEGRAARIKQINIVGNRAYSDKALIKKFKLTTPTLFSFFTKSDQY
                     SKQKLSADLEALRSHYLDHGYINFNIDSTQVSITPDKSDIYITINVSEGARYTLSEVK
                     LAGDLIVPQQDLFPLVTTKRGMVFSRKAVTQTSTNLTERLGDEGYAFANVNAVPEIDN
                     AKKTVALSYFIDPGKRVYVRRINFSGNTKTRDEVLRREMRQLEGAWFSTSKVNRSKVR
                     LQRLGFFEEVNAETPPVPGTTDQVDVNFAVTERASGNLLLGLGFSQTQGLIFNTQITQ
                     DNFLGTGNRVKFAFNNSDVNRIFALGYTNPYYTPQGISRGFDVSYRETDAESANVTRF
                     DSKVLSGGINFGIPVTEYQFVNIGLAYEDTEIDVDPRFISQQVRDFIAREGNQFNVLR
                     FNTSFAYDTRNKALLPDSGVLHRVRAEVAIPGGDLRYYKLEYDTHWYYPLVE"
BASE COUNT         1097 a         1430 c         1649 g         1284 t
ORIGIN      
        1 cgagcctgat cttttcatcc gtaccggagg ggaacggcgg atcagcaact atctgctctg
       61 gcaattggcg tatactgaac tgtactttat ggattgcctg tggcctgatt ttggcgagga
      121 acatttagag atcgctcttg actggtatgc gacacggcag cggcgctttg gtagaactag
      181 cgaacagatc cgacaggctc aacacgctta aacagcggtt gattaccgca gcgttattga
      241 tccttacgac tctggcggcc tttatgttct tacccacagg tatggtggct ttggtgttag
      301 gcgttttcgg ggcgctgggt gcctgggagt gggctgccct tgtaggttgg ccaagcgctc
      361 gggctcgctt ggcctatgtg actgtctgct tagccttgct gatgctggcc tactggctac
      421 tgcagttacc ctggctgggg gctgggatca cggcattggt gtcactttgg ttgctagggt
      481 gggcggttat cttttattgg gtcattgcct atcaacgcgg ccgccggaca gtaccccgat
      541 cgagggcctt acaggcaggc gtaggtttac tggtgatggt atctgcctgg agtgcgctcg
      601 tggtcttgca tggctcgttt gggggcgggg tatatctgct aatatcgctg atgctgctcg
      661 tctggggagc agataccgcg gcattcttcg taggacgacg ttggggcaag catcggctgg
      721 ccgacaggat cagtccgggt aagacctggg aaggttttct aggcgcctta gccgcaaccg
      781 tggggatcgc gtggatatgc tctgcgccgc tcggattagc ggcctttgaa aggctgttat
      841 tcttgctcct atgcttagtg accgtggcct tttcggtctt aggcgatctg cttgaaagct
      901 tgttaaaacg cctagcgggt gtcaaagaca gcagcgcgct cttgccgggg catggaggga
      961 ttttggaccg aatcgacagt atgctagcag cggcgcctgt tttcgctatc ggggtgagta
     1021 tcctgaggat ctattcgtga tcggcgtgac cgttttgggt tccacaggca ccattggggt
     1081 gaataccctg gatgtgatcg cgcgccatcg tgaccgcttt cgagtgacag cactgacggc
     1141 caatggggat gtggaggggc ttgcggaaca atgcaggcgc tggttgccaa ggtatgcggt
     1201 catggcggat ccggatcgcg ctcaagactt gaggcagagg ctcgctcgga gctatcctgg
     1261 ggttgaggta ctggcgggta gagaagctat tttccaggtc gcgagcgccg ccgagaccga
     1321 ctatgtcatg gccgccattg taggggcagc ggggttgatg ccgaccttag ccgctgcccg
     1381 cgccgggaaa cggatcctgc tcgccaataa ggaagctctg gtcatgtcag ggcggatcct
     1441 gatcgatgca gtgcggcaga gcggggctca gatcttgcct atcgacagcg agcacaatgc
     1501 cgtgtttcaa tgcctgccac gcggttttga gcggggtctc gaagatgttg gcgtaagccg
     1561 gatcctgctc acggcctccg gcgggccttt tcgcaagctg cctttatcgg cgctgcgcca
     1621 ggtcacaccg gctcaggcct gcgcgcatcc caattgggtg atgggccgaa agatctcggt
     1681 ggattgtgca accatgatga ataaggggct cgagctcatc gaggcctgct ggctattcaa
     1741 taccaccccc gaaaaggtgg acgtggtgct gcatccgcaa agtgtggtgc attccttggt
     1801 cgaatacatc gatggttcag tcttggccca attaggtcat cccgatatgc gcaccccgat
     1861 cgcccatgcc ttggcctggc cggagaggat acaatcgggc tcggaaggtt tggatctctt
     1921 tgaggttgca aggcttgatt tcgagcgacc ggatgtggcg cggtttccct gcctgcggct
     1981 cgcccgggaa gcgatgagcc tgggtggaac ggcggcagct attctcaacg ccgcgaacga
     2041 ggtagccgtt gcagcctttc tcgcgggcga gctcaatttt gcggatatcc ctgcggtcat
     2101 agaaacaacc ctctcccacc tgccaagcca tgaggcggta tccctggagg tgatactcaa
     2161 agccgatgct tgcgctcggc agaatgctct gcaaacactg aagactcagg tgtcatgatg
     2221 ccggtgcttt attctattct cgcatttatc ctggcccttg ggatcctggt cgccgttcat
     2281 gagtttggcc acttctgggt agcgcagcgc ctgggcgtca agatcctgcg tttctccatt
     2341 ggctttgggc gcatcgcatg gcggcgccag ttcggcccgg atcagaccga attcgcgatt
     2401 gccaccatac cgctcggcgg ctatgtgaag atgctcgatg aacgggaagg cgaggtgccg
     2461 gaagctgaat tgcaccgtgc cttcaaccgt cagcccttgg cttaccggac cgcgattgtc
     2521 tttgccggac ccttgttcaa ttttttgttt gcgatcgtgg tttactggct gatgtttgtt
     2581 atcggcgtcg cgggcctcaa gcctatcgtc ggcgaggtga taccgggatc agccgccgag
     2641 cgggcaggtt tccggccggg cgatcagatc gtcgccgtgg attcgcaacc cacacccacc
     2701 tggaacgcgg tgttgcaggc atgcatagag agaatactcg acaccgggga ggtggtgatg
     2761 aacgtccggg ggggtgggga gctggaacgc gaactcaggc ttgccttgag gagctccgtg
     2821 agcctcgatg acgtaagccg tggcaacctg acccaaaagc ttgggataaa gccttaccgg
     2881 cctcgattcc ccgcggttat cggcgaggtc atggcgggtg gagccgcggc ccgggccggt
     2941 cttaggcccg gcgatcgaat cctcagggca gatggtcagc ccattgaata ttgggacacc
     3001 tgggtagaat acgtacaggc acggcctgag cgcttgatac aggtagagat ctggcgcgct
     3061 aacgagcgag tcgtacttga tctcacccct gaccgtatcg agcaggaagg cagcgcgatc
     3121 gggcgtatcg gcgcgagtgt tgcggcacct gaaggcttgg aacaggagct gttagcggtc
     3181 gagcaataca accccttgac cgcattcacg ctggctgtgc gaaagaccgg ggatctctcg
     3241 tggttcacgc tgcagatctt gggccagatg ctggcaggtc aagcctcgct tcagaacctg
     3301 agcggcccga tcagcattgc ccggtatgcg ggcgagtcgg ccagtatagg cttggtggcg
     3361 tttcttgcct ttctaggact catcagtgtg agccttgggg tggtaaacct gttgccggtg
     3421 cctttactgg atggcggcca tctgctgtat taccttatcg aattcatcag ccgcaagcct
     3481 gtctctgaaa ccgcgcagat cgtcggccaa cagatcggcc tcgtgatcct cctcggattg
     3541 atgggacttg cgctttacaa cgatattatg cgcctcctct tcaattaggc tcaataaact
     3601 aaaataatgt atcgtctgct gaagaagttg ggatatacgg tttttttgtt tgttctttgg
     3661 ccctcttccg ctgttgctaa ggactccttt atcgtcaaag atatccgcgt tgagggactg
     3721 gagcgtatct cgcccggcac ggtgttcaac tatctgccta tacgggtggg tgatgagttt
     3781 gatgcaagcc gttcagcgga ggccgtgcgc gcgctgttca agaccggttt tttcagggat
     3841 gtgcggctcg agcgcgaggg cgacgtactg gtggtgatcg tctccgaacg ggagacgatc
     3901 gccgagatca ccgtcaccgg aaataaggac atcggcaccg aagatctgtt ggaggggctt
     3961 aagaagatcg ggttcgccga aggcggcgtg tttgaccgtt cactgctcga taaggtcgag
     4021 caggagctca ggcggcaata tttttctcag ggcaaatatg gggtcaagct tgactctcaa
     4081 gtaaaaaaac tcggggcaaa ccgggtggct gtaaccatcg ctatcaccga aggacgcgcg
     4141 gctagaataa aacagatcaa tatcgtggga aaccgggctt atagcgacaa agcgctgata
     4201 aagaagttca agctgacgac accgacctta ttttcatttt tcaccaaatc cgatcagtat
     4261 tccaaacaga agctcagcgc cgatttagag gcgctgcgct cgcattatct cgatcacggc
     4321 tacattaact tcaatatcga ttctacgcag gtttccatta cgccggacaa gagtgatatc
     4381 tatatcacga tcaacgtcag tgaaggcgcg cgctacaccc tctcggaggt aaagctggcc
     4441 ggtgatctga tcgtgcctca acaagacctt tttccgctgg tgacgaccaa gcgaggcatg
     4501 gtcttctccc gcaaggcggt cacccagacc agcacgaatc tcaccgaacg cctgggcgat
     4561 gagggttacg cctttgccaa tgtcaatgcc gtacccgaga tcgataatgc caaaaagacc
     4621 gtggccttga gttattttat cgatcccggc aagcgggttt atgtccgccg catcaacttt
     4681 tccggcaata ccaagacccg cgatgaggta ttgaggcgcg agatgcgaca gctcgagggg
     4741 gcctggtttt caaccagtaa agtcaaccgc tccaaggtcc gcttgcaaag actcgggttt
     4801 ttcgaagagg tcaatgccga aaccccgccg gtgccgggta ccaccgatca ggtggatgtg
     4861 aatttcgccg tgaccgagcg ggcttccggc aacctgctgt tagggctcgg gttctcacag
     4921 acccaaggtc tcatcttcaa tacccaaatc acccaagata atttcctcgg caccggcaac
     4981 cgcgtgaaat tcgctttcaa taacagcgac gtcaaccgca tatttgcctt gggctatacc
     5041 aatccttact atacccccca gggcatcagc cggggctttg atgtctccta ccgggagaca
     5101 gacgcagaga gtgcgaacgt gacgcgcttt gactccaagg tgctgagcgg gggcatcaac
     5161 tttgggatcc cggtgaccga atatcagttc gtcaatattg gattggccta cgaagatacg
     5221 gagatcgatg tggatccgcg ctttatctcc caacaggttc gggactttat cgcgcgcgaa
     5281 ggtaaccaat ttaatgtctt gcgtttcaat accagttttg cctatgacac gcgtaacaag
     5341 gcgctgcttc ccgatagcgg tgtgttacat cgggtgcgtg ccgaagtggc gataccgggg
     5401 ggcgatctgc gctactacaa actggaatac gatactcatt ggtattatcc cttagtggaa
//
LOCUS       DASQSL010001663         1949 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_117201, whole genome shotgun sequence.
ACCESSION   DASQSL010001663 DASQSL010000000
VERSION     DASQSL010001663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1949)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1949)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1949
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117201"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            147..593
                     /locus_tag="VE844_16935"
     CDS             147..593
                     /locus_tag="VE844_16935"
                     /inference="COORDINATES: protein motif:HMM:NF018595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043231 - intracellular membrane-bounded
                     organelle [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDGSH iron-sulfur domain-containing protein"
                     /protein_id="HZC02970.1"
                     /translation="MALRPPIPDLSTGREVTYEGTRIKVKDDRSICVHAGFCSTRITN
                     VWRMVGKTDDTQVRAQVMAMIERCPSGALSYTLEPDGEIVEPDLPKEITVIPDGPLWL
                     SGGIPVERAERLTFETRNRVTLCRCGASKNKPLCDGTHKEVGFRAK"
     gene            724..1314
                     /locus_tag="VE844_16940"
     CDS             724..1314
                     /locus_tag="VE844_16940"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012901645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008752 - FMN reductase (NAD(P)H) activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0052873 - FMN reductase (NADPH) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HZC02971.1"
                     /translation="MQQTIEVLGITGSLRRDSYNKALLRAAQQFAPPGMLIKIYEDLG
                     SIPPYNTDIEAEAYPEVAKELKRRIRDSDGILIVTPEYNYGLPGVLKNAIDWASRPYG
                     DSAWEGKPLAIMGASPGQSGTVRAQLQLRQAAIFLNMLPLNRPEVLVSGADSRFDASL
                     NLTDETSRKFVRDELEAFAQWIERLRLGLGAMASPG"
     gene            1585..>1949
                     /locus_tag="VE844_16945"
     CDS             1585..>1949
                     /locus_tag="VE844_16945"
                     /inference="COORDINATES: protein motif:HMM:NF014708.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HZC02972.1"
                     /translation="MESGPWHPHRDNEVITYVLEGEFQHADQNGKGGVLYQGDVQHTT
                     VGRGMFHEEINHRPDIPMTFLQIWIIPWEKGLEPSVEQRAVKKEERLNRFLTLVSDKN
                     PDALPLAQDAEFVVSSLESG"
BASE COUNT          454 a          504 c          583 g          408 t
ORIGIN      
        1 gggcagtacc cttggttagt aagaccccga tcatttccga atataagggg aggttttgag
       61 caccgcagaa cagtattcgc tgtgccggtg tggtcaatcc gggatgaagc ccttctgtga
      121 cgggagccac atgggcgtgg attttgatgg cactgagacc gccgataccg gacctatcca
      181 ctggtcgcga ggtcacctac gaaggcacta gaatcaaggt caaggatgat cggtctatct
      241 gtgtccatgc cggattctgc agcactcgga ttaccaatgt atggagaatg gtcgggaaaa
      301 ccgatgacac ccaggtgcgg gctcaggtca tggccatgat cgagcgatgt ccatcagggg
      361 ctctttccta tactttggaa ccagatggcg agatcgtgga gccagacctc ccaaaggaga
      421 tcactgttat tcctgacggg cccctgtggc taagcggcgg tatacctgtg gagcgagccg
      481 agaggttgac ctttgagact cgcaatcgag tcaccttatg ccgttgcggc gcctccaaga
      541 acaagcccct gtgcgatggg acccacaaag aagtcggatt tagggcgaaa tgagtatagg
      601 gatgggcata ccgctgggga gaagacgtac tcctgagtat cttcgcagat gacagagtca
      661 gaccgatgca gttcctgatt cacgataaga ctgtgaatga gtagaactag gaaggagtca
      721 accatgcagc aaaccataga ggtactaggc attacgggaa gcctgcgccg ggactcgtat
      781 aacaaagccc tccttcgggc tgcgcagcag tttgccccgc ctgggatgct gatcaagatt
      841 tacgaggatt tgggttctat tccaccctat aacactgaca ttgaggccga ggcctatcct
      901 gaggtggcta aggagctcaa gcggcgcatc cgtgacagcg atgggatcct gatcgtgact
      961 ccagagtaca actacggtct ccctggcgtc ctcaagaatg ccatcgactg ggccagccgc
     1021 ccctacggtg actccgcctg ggagggcaag ccgctggcaa tcatgggtgc atcacctggc
     1081 cagagcggta ccgtgcgggc ccaactccag ttacggcagg cggcgatctt cctcaacatg
     1141 ttgccgctca accggcccga agttctcgtc agcggggcgg actccaggtt tgacgccagc
     1201 ctcaatctca ctgatgaaac gagccgaaag tttgttcgag atgaactgga agctttcgcc
     1261 cagtggattg aacggctccg gctggggttg ggagcaatgg cctcacccgg gtagccaggt
     1321 ccgacatggg caatttgggt gaaggacctg cagcagccgc atcatcagaa ggaaccggcg
     1381 gcccttggct gcttaaccca acgcaaagga ggtattacaa catgattgag gtcaggaaga
     1441 agcaagaaat ctttcatatc gaagaggatt ggttcgaggg ttactggcac ttttcctttg
     1501 gggtccctcc gcaagggttc cacgacccgc agaacactaa ttttggggct ttaagggtct
     1561 tcaatattga cactctgatc cccggtggag tctggcccat ggcatcctca tcgggacaac
     1621 gaggtcatta cctatgtcct ggagggcgag ttccagcacg ctgaccagaa cggcaaaggc
     1681 ggagtccttt accaggggga tgtgcagcac actacggtag gtcggggaat gttccatgag
     1741 gagatcaacc accggccaga cattcccatg actttccttc agatttggat tataccttgg
     1801 gagaagggcc tggaaccatc ggtggagcag cgggctgtga agaaagagga gcggctgaac
     1861 cggttcttga ccttggtatc ggacaagaac ccggatgcgc tgcctctagc gcaggatgcc
     1921 gaattcgtgg tctcgtctct ggagtcagg
//
LOCUS       DASQSL010001664         1419 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_79601, whole genome shotgun sequence.
ACCESSION   DASQSL010001664 DASQSL010000000
VERSION     DASQSL010001664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1419)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1419)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1419
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79601"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            176..715
                     /locus_tag="VE844_16950"
     CDS             176..715
                     /locus_tag="VE844_16950"
                     /inference="COORDINATES: protein motif:HMM:NF024940.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC02973.1"
                     /translation="MTLLTLNLREWKALETVAARTTDAHILRRAQALLWLDEGETVPE
                     VAAQLRVTRQAVYKWVSCFRRRSALDMAACLGPGKRSGRPRLVHGVIDPLIMEVIERD
                     PRELGYRSTVWTAPLLRQYLQEIHHLEVSRPSVSLAIDRLGLRWKRPRHGLARRPATW
                     RQATGGSNVAWRHGSAPLS"
     gene            652..1251
                     /locus_tag="VE844_16955"
     CDS             652..1251
                     /locus_tag="VE844_16955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012845379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC02974.1"
                     /translation="MAAGNRGLKRGLATRKRTVILMLDETIITETPPLYACYGHIGEQ
                     VCVPITGNHARRILHGVLNVQNGEVLLLITEEWVQETHQAFLIMIRSHWRGWNIVLFE
                     DRGSPHTAGESLRLAGELHIKLRFLPKATPELNAMDHLWRHVKGRGLANRATQSIDES
                     ADSACRYILDMSRRERLRKAGVLSGNFWLTKGLFCQRTF"
BASE COUNT          297 a          371 c          443 g          308 t
ORIGIN      
        1 caatatcctt cgcgtacgcg aggcacgcct gcacatccgt ccgggacagg tcaggatggg
       61 cagcaagcaa ctcgccgata tccgggttat gggagagctc ctctaagtaa gttctaaaaa
      121 gtccgttgac aagtataatg agtcattgca tcaccagcta aacaggaggt gagccgtgac
      181 cttgttgaca ctcaacctca gagaatggaa agccttggag actgttgctg ctcgcaccac
      241 tgatgcccat attcttcgtc gtgcccaggc cttgttgtgg ctcgatgagg gggagaccgt
      301 gcccgaggtg gctgcacagt tgcgggtcac acgccaggct gtgtacaagt gggtgagctg
      361 ctttcgaagg cgcagcgcgt tggacatggc ggcttgcctt gggccaggaa agcgcagtgg
      421 ccgtcctcgc ctcgtgcatg gggttattga tcctttgatc atggaggtga tcgagcggga
      481 cccgcgcgag ttgggctatc gctcgaccgt gtggacggcc ccactgctgc gccaatatct
      541 gcaggagatt caccatctcg aggtctcccg gcctagcgtg agcttggcca tcgatcgctt
      601 gggtcttcgg tggaagcggc ctcggcatgg ccttgcacgt cgcccggcga catggcggca
      661 ggcaacaggg ggctcaaacg tggcctggcg acacggaagc gcaccgttat cctgatgctc
      721 gatgagacca ttattaccga gactccaccg ctctatgcat gctatggcca tattggggag
      781 caagtctgcg tcccgatcac ggggaatcac gctaggcgca tcctccatgg tgtgctcaat
      841 gtccagaacg gagaggtact cttgctgatc accgaggagt gggtccaaga aactcatcag
      901 gccttcctca ttatgattcg ctcgcattgg cgtggctgga atattgtctt gttcgaggat
      961 cggggctcgc cgcatactgc aggcgagagt ctgcgcctgg ctggggagct gcacatcaag
     1021 ctgcgcttct tacccaaagc aacgccagag ctgaacgcga tggaccatct ttggcggcat
     1081 gtgaaggggc gggggttggc caatcgcgcc acacagtcca tcgatgaatc cgcggacagc
     1141 gcatgtcggt acattctcga catgagtcgt cgcgagcgct tgcgaaaagc tggggtgtta
     1201 tcaggcaact tttggctcac taagggactg ttttgtcaac ggacttttta gaagttactt
     1261 agataaaatg gagagaaggg ggttaagctt aggccatgtt aaagcctgtt cgagtgccgg
     1321 agatccccga agctgaacag accccgttgg tgcgaggtct ggtgggcatc attgaggagc
     1381 aagccgagca acttcgccag caagaggagt tgattgggc
//
LOCUS       DASQSL010001665         1804 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_26330, whole genome shotgun sequence.
ACCESSION   DASQSL010001665 DASQSL010000000
VERSION     DASQSL010001665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1804
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26330"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..370
                     /locus_tag="VE844_16960"
     CDS             <1..370
                     /locus_tag="VE844_16960"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HZC02975.1"
                     /translation="AQKLRVVLDNLLSNAIKYSPEGGHIRIVLIRRSGQVVLEVQDAG
                     PGIDPDEHDKVFEPFYQGRAVYRGHIKGTGLGLAIAQEYIKAHGGKIAIIDQKHGACF
                     RVTLPGAGPPIAMGQGSSPG"
     gene            367..1098
                     /locus_tag="VE844_16965"
     CDS             367..1098
                     /locus_tag="VE844_16965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02976.1"
                     /translation="MKRYQGGIMLLWICASMGWGGCTAEQRVRDPARLTMAQLECSVV
                     SWREPANRAADRGTGLLDYVERVRQAPTEIQEREFDCVEQSLVQEPNPKQRLRLALLL
                     LLPDSQYRDEMRARQLLDEFRTNAGPEEYRPFINLLLSFVDEREAEQKAYGRLERKLA
                     DKQKAYRGLKRKLADEQRKRETMQKQLKILKTLEQRLAEEQKKRKILQKQLEAVKAIE
                     TKLKEREKLETLPLDHVEQDPAGGR"
     gene            1037..>1804
                     /locus_tag="VE844_16970"
     CDS             1037..>1804
                     /locus_tag="VE844_16970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018232291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HZC02977.1"
                     /translation="MKSSKHSPSIMSNKILLVDDDPSLRRLLRMRLTAAGYEVDAVDS
                     GEQAVARLPVFQPHLVITDLRMEGMDGMALFEIIHHQNSTLPVVILTAYGTIPEAVEA
                     THRGVFGYLTKPFDSQELLECVAKALRVSGAPQPEDENARYVEWRRDIITRSAMMEAL
                     LSRAQRVARSEISILIQSDSGTGKELLAKAIHRASPRAAKAFVAVDCTAIPETLFESE
                     LFGHRKGSFTGATREHRGLFQTAHGGTIFMDEIGDLPL"
BASE COUNT          412 a          490 c          572 g          330 t
ORIGIN      
        1 cgcccagaag ctccgagtgg ttctggacaa cctgctttcc aatgcgatta aatattcgcc
       61 cgagggtgga cacatacgca tcgttctcat ccggcgatcc ggccaggtgg tcctcgaagt
      121 acaggatgcg gggcccggca tcgacccgga tgagcatgac aaagtctttg agcccttcta
      181 tcaagggcgg gcggtatatc gcgggcatat caaggggact ggcttgggat tggccatcgc
      241 tcaggagtat ataaaggcgc acggcggcaa gatcgcgatc atagaccaga aacacggcgc
      301 ctgtttccgg gtaacgctac cgggggcagg acccccgata gcaatgggcc agggttcttc
      361 ccccggatga aacgttacca gggcgggatc atgctgctct ggatctgtgc cagcatgggg
      421 tggggtggct gcactgctga gcagagggtg cgcgatccag cccgcctcac gatggcacag
      481 ctggagtgtt cggtggtgtc ttggagggag cctgcgaacc gtgcggcgga cagagggacc
      541 gggctgttag attacgtaga acgggtgcgg caagcgccca cagagatcca agagcgcgag
      601 tttgactgcg tcgagcagtc ccttgtgcag gagcccaacc cgaaacagcg gcttcgcctg
      661 gcactcctat tgctgctgcc tgattctcaa taccgggatg aaatgcgggc gcgccaactg
      721 ctcgacgagt tccgaacgaa tgctggcccc gaggagtacc ggccatttat aaacctcctg
      781 ctctcctttg tggacgaacg ggaagccgag cagaaggcct atgggcggtt ggaacggaaa
      841 ttggccgata aacagaaggc ctataggggg ctgaaaagga agttggctga cgagcagaga
      901 aagcgcgaga ccatgcaaaa acagctgaaa atactaaaga ctctggagca gcggttggca
      961 gaggagcaga aaaaacggaa gatcctgcag aaacaactgg aagcagtgaa ggcgatcgaa
     1021 acgaagctca aggagcgtga aaagctcgaa acactccccc tcgatcatgt cgaacaagat
     1081 cctgctggtg gacgatgatc ccagcttgcg gcgactgctc aggatgcgct tgaccgcagc
     1141 cggctatgaa gtcgatgctg tggacagcgg tgagcaggcc gttgcgcggc tgccagtatt
     1201 tcagcctcat ctggtgatca cggatctgcg catggaaggc atggacggca tggctttgtt
     1261 tgagatcatc caccatcaaa actccaccct gccggtggtg atattgacgg cgtatggaac
     1321 gatcccggag gcagtggaag ccacccaccg cggtgtcttt gggtacctga ccaaaccctt
     1381 cgacagccag gaactgctcg agtgcgtcgc caaggccctg cgcgtcagtg gtgcaccgca
     1441 gccagaagat gaaaatgccc ggtacgtgga gtggcggcgt gacatcatca cccgcagcgc
     1501 gatgatggaa gccttgctca gtcgcgcaca gcgggtggcc cgatcggaga tcagtatcct
     1561 cattcagagt gatagcggca ctggcaagga actgctcgcc aaggccatcc accgggccag
     1621 tcctcgggca gcgaaggcgt ttgttgccgt cgactgtacc gcgatcccgg aaaccctctt
     1681 tgaatcggag ctttttggac accgcaaagg ttcctttacc ggcgcgacgc gggagcacag
     1741 gggcctgttc caaacggcgc acggtggcac tatctttatg gatgagatcg gcgatctgcc
     1801 cctg
//
LOCUS       DASQSL010001666         1443 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_171605, whole genome shotgun sequence.
ACCESSION   DASQSL010001666 DASQSL010000000
VERSION     DASQSL010001666.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1443)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1443)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1443
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171605"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1216)
                     /locus_tag="VE844_16975"
     CDS             complement(<1..1216)
                     /locus_tag="VE844_16975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02978.1"
                     /translation="MPPATADLGPEAPAVQDIPGGTCPLSPMQICLLWAARQENIISP
                     LAFTVYVAAHEVKFWRCKTEPGQTYRSTPYGFQRSDVNRLLPEVPAAKIAKAFAELEA
                     IHLLTLADTGIWFAETLNEVSVHERVKQRALTMFNQLHPDTRDKRIKIPRRLLKLIIQ
                     CGRRIVRTATLFGLLLTTMLTKRTTQYEGYKGCCKAAWIGKLFGVNAKRVNRERAKLI
                     DEGWFTREPTTPRARKKFGQWVRLTLTPSEPTPEAPEPVENPAPDTPKVQPQTPPDDT
                     KVQPLLNPSLSSGEEILNNQTLPAQEPEPGADQPKPLHAPIWTAMQLNDLRDDARSEA
                     LWQEAIQRGHLKQTQPDRLNFFAAIAHALRVAKHNACGLLRTVVEQGHWHFLTQTDEY
                     NAIQRLRRLADAH"
BASE COUNT          272 a          349 c          484 g          338 t
ORIGIN      
        1 cgtgcgcatc ggcgaggcgt cgcagtcgct ggatggcgtt gtattcatcc gtttgggtta
       61 ggaagtgcca gtgtccctgt tcaacgaccg tgcgcagcag gccacaggcg ttgtgcttgg
      121 ccacgcggag ggcatgcgcg atcgccgcaa aaaaattaag gcggtcaggc tgggtctgtt
      181 tgagatggcc tcgttggatg gcttcctgcc agagggcttc acttcgggcg tcatctcgca
      241 ggtcgttgag ctgcatagcc gtccagatcg gcgcatggag aggttttggc tgatcagcac
      301 caggttcggg ctcttgggcg gggagtgtct ggttattcag gatctcttcg ccagaagaga
      361 gagaggggtt aagaagaggt tgcactttgg tgtcgtctgg gggcgtttga ggttgcactt
      421 tgggcgtgtc cggggcgggg ttttccacag gctcaggcgc ctccggggtc ggctcagacg
      481 gggtgagcgt gagtcgcacc cattggccga actttttgcg agcacgaggc gtggtgggtt
      541 cgcgcgtgaa ccatccctca tcgatcaact tggcgcgttc ccggttgacc cgcttggcat
      601 tgacgccgaa gagcttaccg atccatgccg ccttgcaaca gcctttgtac ccctcgtatt
      661 gggtggtacg cttggtcagc atggtggtga gcaacaggcc aaagagcgtg gcggttcgga
      721 cgatccgtct gccacattgg ataatcagtt tgaggaggcg gcggggaatt ttgatgcgtt
      781 tatcgcgcgt gtcgggatgg agttggttga acatggtgag ggcacgctgc ttgacccgct
      841 catggacgct cacctcgttg agggtttctg caaaccagat gccggtatca gcaagcgtca
      901 gcaggtggat ggcttcgagt tcagcaaatg ccttagcaat ctttgccgct ggcacttctg
      961 ggaggagccg gttcacatca gagcgctgaa atccgtaggg tgtagagcga tacgtctggc
     1021 cgggttccgt cttgcagcgc caaaatttca cctcgtgggc tgcgacatac acggtgaagg
     1081 ctaacggact gatgatgttt tcctgccggg ctgcccacag gagacaaatc tgcatggggg
     1141 aaagcggaca ggtaccgccg ggaatgtctt gcacggctgg tgcttctgga cccaggtcgg
     1201 ctgttgctgg tggcatcggt gaatctcacg catagaggcg gatcgtattg gcgcatccgc
     1261 gtatctcggt gagggcgggg cggtttctgg attttggaca aaaaatccag gtgagacgaa
     1321 cgagctgtgc ttgacttcgg taggaatggt aggctagatt agaagtgcaa attcaaaatc
     1381 tagacctgcg attccccaca ttgaatcgta cgtcctatga aagagccgac tgttgacgca
     1441 gtc
//
LOCUS       DASQSL010001667         1154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_191703, whole genome shotgun sequence.
ACCESSION   DASQSL010001667 DASQSL010000000
VERSION     DASQSL010001667.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191703"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1154)
                     /locus_tag="VE844_16980"
     rRNA            complement(<1..>1154)
                     /locus_tag="VE844_16980"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          205 a          392 c          303 g          254 t
ORIGIN      
        1 tctttcgact ctgctcgaca tgtccgtctc gcagtcaagc gggcttatgc cattgcactc
       61 taaacgagcg atttccgacc gctctgagcc caccttcgcg cgcctccgtt actctttggg
      121 aggcgaccgc cccagtcaaa ctacccacca cacacggtcc cggcgccgga tgacggtgcc
      181 cggttagaca ttcatgactt caagggtggt atttcaaggg tgcctccacc agagctggcg
      241 ccccggcttc acaggctccc acctatccta cacatccgcc ccctcgtgcc actgcaaagc
      301 tgtagtaaag gtgcacgggg tctttccgtc tgaccgcggg tagcccgcat cttcacgggc
      361 atttcaattt cgctgagtcg gtgttggaga cagcggggag accgttacgc cattcgtgca
      421 ggtcggaact tacccgacaa ggaatttcgc taccttagga ccgttatagt tacggccgcc
      481 gtttaccggg gcttcgattc agagcttcgc cggccgaagc cagctaaccc ctcctcttaa
      541 ccttccggca ccgggcaggc gtcagaccct atacgtcgcc ttgcggcttc gcagagccct
      601 gtgtttttgc taaacagtcg ccaccccctg gtctgtgccc cccgcacctg gttgcccaga
      661 tacggggctc ccttctcgcg aacttacggg agcaatttgc cgagttcctt cagcatcgtt
      721 ctctcaagcg ccttggtatg ctctacctgt ccacctgtgt cggtttgggg tacggtcctg
      781 tgctggggct atttcctgga cacccgcagc cgccaggaca atccactaag ccctgacaac
      841 ctcaaggtgc cgtcaccacc agcgggctga ggaatgttga cctcattccc atcggctacg
      901 gctttcgccc tcgccttagg ggccggctca ccctgcgcgg acgaaccttg cgcaggaacc
      961 cttggacttc cggcgacagg gactctcacc ctgttgatcg ctactcatgt cagcatgtgc
     1021 acttccgatg cctccagccg gcctcacgac cgaccttcac cggcctacgg aacgctccgc
     1081 taccggtccg gaggtcagag atcagaggtc ggaaatcgga tgtcagaaga tgctggcccg
     1141 atcttgcggt acag
//
LOCUS       DASQSL010001668         1183 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_79618, whole genome shotgun sequence.
ACCESSION   DASQSL010001668 DASQSL010000000
VERSION     DASQSL010001668.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79618"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1183
                     /locus_tag="VE844_16985"
     CDS             <1..>1183
                     /locus_tag="VE844_16985"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZC02979.1"
                     /translation="TIIAKSTMEDATLSGFTGWEQISNSVWRLSLRDGVKFHNGEPWT
                     AEAAKFTFDFYGNSATDAPNYAFLGDTTTKVIDPKTIEVTCAVACPIFPRFSGFLNFL
                     APEWYQNASDAEKATSNVGFGPLKHVEYRIGEVWRAERYEDYVPVPDLAEGAMPTIRE
                     VTWVFRSETGVRLAMLQTGEADLALRLDLDDADNMPAFSIGAEGSVMTLRFDTIWNPL
                     LAKKEMRQALMHAIDCPTMAQSFYKGFAECLGVPAPLGVLGVTEENIKPLHEYNPDKA
                     KELLAQAGYNGEEVRVRMREGRFPKDVEMGEAIVSYWNDVGVNAKLLVMESSKWLDLH
                     QTGPGAFPPEDWSRLSQLPPPPPGLTSPDVLFAAPGNDTLDFGRNLAFYMDCRSERAK
                     V"
BASE COUNT          240 a          352 c          352 g          239 t
ORIGIN      
        1 tcaccatcat cgccaagtca accatggaag atgctactct atccgggttt accgggtggg
       61 aacagataag caacagcgta tggcgtctct ccctgcggga cggcgtcaag ttccacaacg
      121 gggaaccctg gactgctgag gcggccaagt tcacctttga cttctacgga aacagcgcca
      181 ccgatgcccc caactacgct ttcctgggtg atactaccac gaaagtcatt gaccccaaga
      241 ccattgaggt aacctgcgcg gtcgcctgcc ctatcttccc tcgcttcagc ggcttcctca
      301 acttcctggc cccggagtgg taccagaacg cctccgacgc cgagaaggcc acctctaacg
      361 tgggctttgg ccctctcaag cacgtcgagt accgcattgg ggaagtgtgg cgggcggagc
      421 ggtacgagga ttatgtgccg gtgccggacc tggctgaggg ggcaatgccc accatcagag
      481 aggtcacctg ggtcttccgg tcggagacgg gagtgcggct agcgatgttg cagaccggag
      541 aggccgactt ggccctgcgc cttgacctgg acgatgcgga caatatgcca gccttctcta
      601 ttggggccga gggctctgta atgaccctcc ggttcgatac tatctggaac cccttgctcg
      661 ccaagaagga gatgcggcag gccctgatgc acgccattga ctgtcctact atggcccaga
      721 gcttttacaa aggcttcgcc gagtgcctgg gcgtcccggc tccgctgggt gtcctggggg
      781 ttaccgagga aaatatcaag cctctccacg agtacaaccc cgacaaggcc aaagaacttc
      841 tggcccaggc tggctacaac ggtgaagaag tccgcgtccg tatgagagag ggtcgattcc
      901 ctaaggacgt ggaaatgggt gaagccattg taagctactg gaatgatgta ggggtcaacg
      961 ctaagctgct ggtgatggag tccagcaaat ggctggactt acaccagact ggtccagggg
     1021 ctttcccgcc ggaagactgg tcccggttgt cccagttgcc tcctcctccg ccgggcctga
     1081 cctcgcctga tgtgctcttc gccgctccgg gcaacgatac cctggacttt ggccgcaacc
     1141 tggccttcta tatggactgc aggagcgagc gggctaaagt gtg
//
LOCUS       DASQSL010001669         1540 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_161847, whole genome shotgun sequence.
ACCESSION   DASQSL010001669 DASQSL010000000
VERSION     DASQSL010001669.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161847"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(160..1458)
                     /locus_tag="VE844_16990"
     CDS             complement(160..1458)
                     /locus_tag="VE844_16990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02980.1"
                     /translation="MSPAKRYANKQAKARQRRRLNAQARLERDRRQAQQAAEALHHAL
                     EELGLPETLVREIEGRLQSQQKLLSKIVGVMFPALFGCRTPSELCRVRGWDKNWPTRL
                     LRALPKRSWLKRLRRLGLEVLVPLWRHVAGKSEATQSRWPWTWAIDDSVFHKYGEQLG
                     LVGHWWSGQQHRVLAGIDGLLLVVVIGDGKLVVPVDFAVRRPDPIGAGGPCRDKLSWA
                     REMIDARLGALGKRGLRLPPPIITADSWFSDSKWMGHVRHRHQGTLLVEGKVTYTFTL
                     ADGRQVNGHDFLEGKWSWRTHPWEPGVSYVRLEAQSPTYGAVTVVIVDEPGADRYYLL
                     CLETALSGPVLIRRWRRRHWIEFVFRVLKHLLATESCQAHSEDAYYGHLVLRLMGSFV
                     LFYTSRVVCKGHLTMEEIIFSLKHYWRFVDLEPLALQALS"
BASE COUNT          342 a          478 c          411 g          309 t
ORIGIN      
        1 aggaagacca gccgaatgct caaagatttt ttgcagtgcg ccttgcgtga aggggtgttt
       61 gctttgatta ccacttgcca cggtccagcg gaactcaatc atctgggttt tccgtatgat
      121 gactttagcc tgtagccgtg cgactttcct gagggtatcc tatgaaagcg cttgtaatgc
      181 caggggttcc agatcaacaa agcgccagta gtgcttcagg ctaaagatga tctcctccat
      241 cgtcagatga cctttgcaga ccacacgcga ggtgtagaac aacacgaaac tccccatcaa
      301 ccgcaacacc agatgcccat aataggcatc ctcgctgtgg gcttggcacg actcggtcgc
      361 caacaagtgc ttcagaaccc gaaagacaaa ttcaatccag tggcggcgtc gccaccttcg
      421 aattaaaacc gggccactca gcgctgtctc taaacacagt aggtagtaac gatccgcgcc
      481 aggctcatcc acgatcacca ccgtgaccgc tccgtacgtg ggactctgag cctctaagcg
      541 cacataggac acgccaggtt cccagggatg cgtacgccat gaccatttgc cctcaagaaa
      601 atcgtgcccg ttgacttggc ggccatcggc caaggtaaag gtatacgtga ctttcccttc
      661 cactaacaag gtaccttgat gccgatggcg gacatgcccc atccatttgg agtcgctaaa
      721 ccagctatca gccgtgatga tcggcggggg caggcgcaag ccgcgtttac ccaaggcccc
      781 gaggcgcgca tcgatcatct ctcgagccca actcaacttg tcccggcaag gccctcccgc
      841 acctatggga tcggggcgcc gcacggcgaa atccaccggc accaccaact tgccatcgcc
      901 aatgacgacc accagcaaga ggccatcaat gcccgcaagc acccggtgtt gctgaccact
      961 ccaccaatgc ccgactaacc ccagctgctc gccatacttg tggaaaacag agtcatcaat
     1021 ggcccaggtc cacggccacc ggctttgggt tgcttcgctt ttgccggcga catgacgcca
     1081 aagcggcacc aacacctcaa ggcccagacg ccgcagccgc ttgagccagg agcgtttggg
     1141 caaggcgcgc aacagacgcg taggccagtt cttgtcccac ccccgcacgc gacagagctc
     1201 cgagggtgtg cgacagccaa agagggcggg aaacatgaca ccgacgattt tactcaacag
     1261 cttctgttgg ctctgtaagc ggccttcgat ttcacgcacc agcgtctcag gcaggccaag
     1321 ctcctccagg gcgtgatgca aggcctcggc ggcctgttgc gcttggcgac ggtcgcgctc
     1381 gaggcgcgct tgagcattga ggcggcggcg ctgtctggct ttggcttgtt tgttggcgta
     1441 tcgtttcgcg ggggacatga tgatctcctt tcgatcgcga tcacgcggtt acttgataga
     1501 aaggaaacca tgtcccactg tgggtcgatt tcaccttgtc
//
LOCUS       DASQSL010001670         1117 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_26370, whole genome shotgun sequence.
ACCESSION   DASQSL010001670 DASQSL010000000
VERSION     DASQSL010001670.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1117
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26370"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1117)
                     /locus_tag="VE844_16995"
     CDS             complement(<1..>1117)
                     /locus_tag="VE844_16995"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HZC02981.1"
                     /translation="FAQEVRKLVHFDRMSINTIDREAGVFTIKYLVGREVVGRYTGAV
                     RTIAGTQTAHMLATGRTIVREALSSAQEFATDAAFLGEGLWSAIMVPLVSKGKIIGSL
                     SLRSRQVAVYGLREQSILEHLANQIAPAIENAELYNRTRQAEEALRQSQEAERRLVAE
                     NALLAETGRIISSTLNIDEVYERFSQETKKLVGFDRMAINIIDHEAGVFVFKYVSGLV
                     QPGRPVPDVVPLPGTQTEYVMKTGQTLVRADVATDLRFRGDRNMLNSGMRSTMMVPLK
                     SKGQTIGTLSLRSRKVGAYEPREQAILERLADLIAPAIENSELYAQTKRAQEELRQSE
                     EQYRILFEQSREAIFLSAPEGHFLDVNQSAVELFGYGR"
BASE COUNT          230 a          342 c          295 g          250 t
ORIGIN      
        1 tctgccatag ccgaagagct ccaccgccga ttgattgacg tccaggaagt gaccttccgg
       61 cgcagataag aatatagcct cccgagactg ctcaaatagg atgcggtact gctcttcgct
      121 ctgccgcaac tcctcctggg cccgcttcgt ctgagcgtag agttccgaat tttcaatggc
      181 cggggcgatg aggtcggcca gccgctccag gatggcctgt tccctgggtt cataggctcc
      241 taccttgcgg ctacgcaagc tcagggtgcc aattgtctgc cccttggact tgagggggac
      301 catcatagtt gagcgcattc ccgaattgag catattccgg tcaccacgaa accggaggtc
      361 cgtggcgaca tcggcccgga ccagggtctg cccagtcttc atcacgtact cggtctgggt
      421 gccgggtaaa ggcacaacat cgggcaccgg ccggcccggc tggaccaggc ccgaaacgta
      481 cttgaagacg aaaaccccag cctcatgatc aatgatattg atggccatgc ggtcgaagcc
      541 caccagcttc ttcgtctcct gggaaaatct ctcgtacacc tcatcaatat tcaaggtaga
      601 cgagatgatc cgcccggtct cggccaggag agcattctcc gcaaccaacc gccgctccgc
      661 ttcctggctc tgcctcaatg cttcctcagc ttgcctcgtc cggttgtaga gttcggcgtt
      721 ctcaatagca ggggcaatct ggttggccaa atgctccaga attgactgct ctcttagccc
      781 gtaaacagcg acctgccgac tccgcaagct tagggagcct attatcttgc ccttggatac
      841 aaggggtacc atgatggctg accacagccc ctctccaaga aaagccgcat cggtagcaaa
      901 ttcctgggcg ctactcaagg cctctcggac tatagtgcgg ccggtggcca gcatatgagc
      961 tgtctgggtt cctgctatag tgcggactgc tccggtgtac ctgcctacta cctctcgccc
     1021 aaccaggtac ttgatggtaa aaactccggc ctcccggtct atggtgttga tggacatgcg
     1081 gtcaaaatgc acgagtttcc ttacttcctg ggcaaat
//
LOCUS       DASQSL010001671         2123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_148835, whole genome shotgun sequence.
ACCESSION   DASQSL010001671 DASQSL010000000
VERSION     DASQSL010001671.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2123
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148835"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            402..1925
                     /locus_tag="VE844_17000"
     CDS             402..1925
                     /locus_tag="VE844_17000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02982.1"
                     /translation="MTTNTLNTASHPDPSTPTARCVAQRLNGQQRQQLAVHVLAGSGP
                     VTALAERHQVSRKFLYQQAAKGEQALQEAFSSPPSTEQKVLFYLPVTQAWLRQVVVAL
                     VLLCHSSFRGVVEFFRDVLDWPIALGSVHTIVQQAVAQAHRINAGEDLSAVHAGGHDE
                     IFQGGQPVLVGVDLDSTYCYLLAAEDQRDGETWAIHLWDLSAKGLQPDYIVADGGKGL
                     RAGQALAWPEVPCHGDVFHALQAMNRLSQRLDNRAYAAIRACAYLERKMIQAKRQHHG
                     QTLSKALAHARRSQTLTIEVADQVRILDQWLQEDILALAGPPAATRQLLYDLVLDSLQ
                     HLECSDRRIQPLRQRLANQREALLAFATELDQAASALAQQYAVSIEIVREVLYWQSQP
                     AHTNAYWHQAARLHRQLGHRFFPLHQALGAATATLHRASSLVENLNSRLRNYFFLRRN
                     IGPAYLELLRFFLNHRPFLRSHKPERRGKTPTQLLTGQDHPHWLEMLGFQRFCRAVV"
BASE COUNT          426 a          676 c          577 g          444 t
ORIGIN      
        1 caagttcttc cggcatcgtc ccgggtggaa cctcgcacag ggctttcgcc gtctcgaaat
       61 ccaacgcaga ttttcgcagc cccataactc ttgttaatta cacccatttt tcactaactc
      121 ttgccctagt atcaagcctc tgctataagt attaattaaa atagcccata ggcagacacg
      181 caagcggtaa ttagctcttt gccgtcaccc gtaccccgaa tagtggctga tcaccgccct
      241 atcctaaggg agtagtctgt ccataaagag gcattgtagc ggtaaaccta ctctatatta
      301 cgggatggtt caatccaggg taacagttta aggcggtagc cattaccggt gtctccgtcg
      361 ggagtataaa ctcccgaaaa gattttccag gaggcaccgg catgactacc aatactctaa
      421 ataccgcttc tcatcccgac ccgtcaacgc ctacagcgcg ctgtgtggca cagcggctca
      481 acggtcagca acgtcaacag ttagcggtgc acgtcttggc cggcagcggc ccagtcacgg
      541 ctctagccga gcgccatcag gtcagccgca agtttctcta ccagcaggcg gctaagggcg
      601 agcaagcgct ccaggaagcg ttttcatccc cgccgtccac cgagcagaag gtgttgttct
      661 atctgccagt gacccaagcg tggctacggc aagtggtggt ggcgttggtg ctgttgtgcc
      721 acagctcctt tcggggcgtg gtggaattct ttcgcgatgt attggattgg cccattgccc
      781 tgggcagcgt gcacaccatc gtccagcagg cggtagcgca ggcgcaccgg atcaatgcgg
      841 gggaagacct cagcgcggtg catgcgggcg gccacgatga gatcttccaa ggtggccagc
      901 cggtgctggt cggggtcgat ttggattcga cctattgcta tctgttggcg gccgaggatc
      961 agcgcgatgg cgagacctgg gcgatccatc tgtgggactt atccgccaag ggcttgcagc
     1021 cagactacat cgtggccgac ggtggcaaag gcttacgcgc cggtcaagcg ctggcctggc
     1081 ccgaggtgcc ctgccacggc gatgtctttc atgccctcca ggcgatgaac cgcttaagcc
     1141 agcgcctgga taaccgcgcc tatgcggcta tccgcgcgtg tgcctacctt gagcgcaaaa
     1201 tgatccaagc caaacgccag caccacggcc aaaccctttc caaagccctg gcccacgccc
     1261 ggcgaagcca aacgctaacc atcgaggtgg ccgatcaagt gcgcatcctg gaccagtggc
     1321 tgcaggaaga tattctcgcc ctggccggac caccagccgc tacacgccaa ctgctgtatg
     1381 acttggtcct cgactcccta caacacctgg agtgctccga tcgccgtatc cagccgctac
     1441 gccagcggtt ggctaaccag cgcgaggccc tcctggcgtt cgccacggaa ctggatcagg
     1501 cggcttcagc gctggcgcaa cagtatgccg tctcgatcga gatcgtgcgt gaggtgctct
     1561 actggcaaag ccagcccgcc cacaccaacg cctattggca tcaagccgcg cggctgcacc
     1621 gccaactcgg ccaccgcttc ttccccctac accaggcact aggagcggcg accgcaaccc
     1681 tccaccgcgc cagttcgttg gtggagaatc tcaatagccg tctgcgcaac tatttcttcc
     1741 tgcgccgcaa catcggcccg gcgtacctgg agctactgcg ctttttcctc aatcatcgcc
     1801 cgtttctgcg cagtcacaaa cctgagcgcc ggggcaaaac gcccacccaa ctgctcaccg
     1861 gtcaggacca tccgcactgg ttggagatgc tcggctttca acggttctgt cgcgccgtcg
     1921 tctgagcggc gctgctcgtc gcctgagtga ccccccagtc ccggctcagg gacagaagat
     1981 tcactttgcc tgtgttaccc taatttgggg gtttttgaac catgcctatt tttctatctt
     2041 tacctaatcg ttgacctcta cagccgcaag atcgtcggct gggaggtgta cgaatgcgag
     2101 tccgctgact atgccgccga ggt
//
LOCUS       DASQSL010001672         2135 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_135805, whole genome shotgun sequence.
ACCESSION   DASQSL010001672 DASQSL010000000
VERSION     DASQSL010001672.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2135
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_135805"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            277..1302
                     /locus_tag="VE844_17005"
     CDS             277..1302
                     /locus_tag="VE844_17005"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020383851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HZC02983.1"
                     /translation="MSAQELETTAKALVAPGKGILAIDESLPSIKKRFDSIGIESNVE
                     NRRAYRELLITTSGAGEFVSGMILFDETIRQVTAEGVPFPEVLIRAGIIPGIKVDQGA
                     KDMAGHPGEKITEGLDGLRERLAEYRKLGARFAKWRAVITIGEGIPSQSCIDANAHAL
                     ARYAALCQEAGLVPIVEPEVLMDADNTIERCYEVTHATLRSVFHALYAQRIVLEQLIL
                     KTNMVIAGKKCPHQASVSEVAEETVRCLRNTVPAAVAGIVFLSGGQSAQLATAHLNAM
                     NSMDIQHPWPLSFSYGRALQDPALKTWGGKAANVAAAQKALYHREKCNSLACLGRYTE
                     EMERQAA"
     gene            complement(1434..1892)
                     /locus_tag="VE844_17010"
     CDS             complement(1434..1892)
                     /locus_tag="VE844_17010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002707656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF29 domain-containing protein"
                     /protein_id="HZC02984.1"
                     /translation="MATGNSLYGRDFYTWAMETARAIRERRFERIEWDAVAEELEDRG
                     KSEKRALESQLERLHAHLLKWRLQSEKRHQDAACERSWRATIRDARMRIEKILKENPG
                     LGPGLPELFSEAYPGGVNWAIAETGLPESLFPSESPWTLDDALDYSFWPE"
BASE COUNT          474 a          623 c          577 g          461 t
ORIGIN      
        1 tttctacaaa ccgcttgtcg cggtcgatct tccctgctaa gcaactcctg cctgaagtga
       61 ggagctttaa atcaagtttg accgggaatt tactgaaaag tgctcaacca catcctcagg
      121 agagcggtta taagctctct gtaaatccct cgaatttggg atagcataaa aggtgaaaca
      181 cgcgcatttc gtcctagaac tttaatcttc ctgctcttat aatttttaaa tctgatccca
      241 ggtgattttg tccaattcat tgagagagca agcaacatgt cagcacagga actcgaaacc
      301 acagccaaag ccttagtggc ccccggcaaa ggcatactcg cgatcgacga aagtctgccg
      361 agcatcaaga aacgattcga tagtatcggc atagagtcta atgtagaaaa ccgccgtgcc
      421 taccgcgagc tgcttatcac gacctcaggt gccggcgaat ttgtcagcgg tatgatcctg
      481 tttgatgaga ccatccgtca ggtcactgca gagggcgtgc cgtttcccga ggtcctaatc
      541 agggctggca ttatccccgg gatcaaagta gaccaaggcg cgaaagatat ggcgggccac
      601 ccgggtgaga agatcaccga ggggctcgat ggtctgcgtg aacgcctggc ggaataccgg
      661 aaattgggcg cccgttttgc caaatggcgg gcggtgatca cgatcggtga ggggatccca
      721 agccagagct gcatcgacgc caatgcccac gcgctggcgc gttatgccgc cctctgccag
      781 gaagccggtc tcgtcccgat cgtcgagccc gaggtattga tggatgccga caataccatc
      841 gagcgctgtt acgaagtcac ccacgccacc ttgcgcagcg tgtttcatgc cctctatgct
      901 cagcgcatcg tgctcgaaca gcttatcctc aagaccaata tggtgattgc gggtaaaaaa
      961 tgcccgcacc aggcgagcgt cagcgaggtc gcggaagaga ccgtgcgctg tctgcgcaac
     1021 accgtgcccg cggcggtagc cggtatcgtg tttttgtctg gtggacagag cgctcagttg
     1081 gcaaccgccc atctcaatgc aatgaactct atggacatcc agcatccctg gccgctcagc
     1141 ttctcctatg gccgggcgct gcaagacccg gcattgaaga cctggggcgg caaggctgcc
     1201 aacgtcgcag cggcccagaa ggccctgtat caccgcgaga agtgcaacag ccttgcgtgc
     1261 ctcgggcgct acacggagga gatggagcgg caagcggctt gagctttgtg agcgatcctt
     1321 cgtctttaga gctcatttcc aatccggtag tcggggttac atcggcccgc aacccatcat
     1381 cgttgagcgg cacaaaaaca ttgacaaatc cgaccaccga catgctttgt ttcctattcc
     1441 ggccagaagc tgtagtccag tgcgtcgtcg agcgtccagg gagattcgct ggggaacagg
     1501 gactccggaa gaccggtttc ggcgatcgcc cagttgactc cgccagggta ggcttcggag
     1561 aaaagctcag gcaaacctgg cccgagccct ggattctctt ttaagatttt ttcaatcctc
     1621 atccgggcgt cccggattgt ggcgcgccaa ctccgctcgc aggccgcgtc ctggtgcctt
     1681 ttctccgact gtaggcgcca cttgagcaga tgggcatgca gccgctcgag ttggctctcc
     1741 aacgcccgct tttcgctttt gcccctatcc tccagctcct cagccaccgc atcccactca
     1801 atcctttcaa accgccgttc ccgaatagcc ctggcagtct ccattgccca ggtatagaaa
     1861 tcccgaccgt ataaagagtt cccagtagcc atggggctgt ccccatattt agcgttcatg
     1921 ccagtagtgt actgcaggtg ggcaacattg caacggaaac gctagcaagc atagcgggcg
     1981 ctgtgcgcac gataaatcgg ttaaaccggc tcgccctact cagagcttcc taccttgtgt
     2041 gagttataag ccctttgtgg ggcgtcggca catgccagca gcgcgccgcg ttcaactgca
     2101 gcggcagata gaacagccag tctgccttaa gttaa
//
LOCUS       DASQSL010001673         1418 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_161861, whole genome shotgun sequence.
ACCESSION   DASQSL010001673 DASQSL010000000
VERSION     DASQSL010001673.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1418
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161861"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(24..1175)
                     /locus_tag="VE844_17015"
     CDS             complement(24..1175)
                     /locus_tag="VE844_17015"
                     /inference="COORDINATES: protein motif:HMM:NF021501.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZC02985.1"
                     /translation="MNKTHTNSKYIRNMAALVSLAIAASTPALFAGQKTGEKEPLARA
                     HLAMPSGAFTSPDHPNRSVAQYLEETYRDALQIHRTKAVKDPAYVPEIAHSLIILGTF
                     YHETERLKPAEQAYQEALQIYRALGKRDAGYHLEVVAALNNLGVLYHETRRLEQAEQT
                     FVEALTILRLHVRKDAETPLLHEASTASNLGTLYHETERLEPAEQAHQEALQAYRALA
                     KRDPVYRTEVAHTAHVLALLYRRMQRLEKAEQALGESLDNYRALTVEDPTYRAEVAMA
                     LNNLGVVYQEGRRAAAAERVFTEAIAACRTLVKQDPTYLADMAITLTNLGTLLHTMRR
                     LEEAEKAYREAFTSFAALAKKDLEYRPYVAMIHNHLARLRYDTLRLEAI"
BASE COUNT          278 a          405 c          407 g          328 t
ORIGIN      
        1 ggcctaaatg ggtacattta aatctatatc gcttccaggc ggagggtatc gtagcgcaaa
       61 cgcgctaagt ggttatggat catggccaca taaggccgat actcgagatc cttcttggcc
      121 agcgcagcga agcttgtgaa agcctcccgg tacgccttct ccgcctcctc caggcggcgc
      181 atggtgtgca acagggtccc cagattagtg agcgttatcg ccatatccgc caaataggtg
      241 ggatcctgct tcaccagagt gcggcaggcc gctatggcct ctgtaaacac tcgttccgcc
      301 gccgccgcgc gccggccctc ctggtatacc acgcccaagt tgttgagcgc catggccacc
      361 tccgcccgat aagtcggatc ttccactgtc agcgcccggt agttatccaa agactcccca
      421 agcgcctgct cggccttctc gaggcgctgc atgcgacgat acagtaaggc cagaacatgg
      481 gcggtgtgcg ccacctccgt gcgatatacg ggatcgcgct tcgccaaagc gcggtaggcc
      541 tggagcgcct cctggtgtgc ctgctccgcg ggctcgaggc gctcggtctc atggtagagg
      601 gtcccaaggt tactggcggt agacgcctca tggagtagag gggtttcggc atccttgcgc
      661 acgtgcaggc gtaagatcgt aagggcctcg acgaatgtct gctccgcctg ctctagacgc
      721 cgggtctcat ggtataagac gccgagattg tttagcgccg ccaccacctc caagtgatat
      781 ccggcgtcgc gctttcccag agcacggtag atttggagcg cctcctggta cgcctgctct
      841 gcgggcttga ggcgctcggt ctcatggtag aaggtcccga ggataataag gctgtgcgct
      901 atctcgggca cgtacgccgg atcctttacc gccttggtgc ggtggatctg cagggcatcc
      961 cggtaagtct cttccaggta ctgcgcaacc gatcggttgg gatgatccgg ggatgtgaac
     1021 gcgcctgagg gcatcgccag atgagcgcgc gcaagcggct ctttctcccc ggttttctgc
     1081 cctgcaaaca aagcgggcgt actggccgcg atcgcaagac tcaccaaagc ggccatatta
     1141 cggatatact tgctgttagt atgggttttg ttcattattt acctcccgtt catggggctt
     1201 ccccggcgat aaaatggaag gtatatactc cttcgggatc gccaagccgt aattattact
     1261 tttaagtcaa gatgcgtgcc agagccggca taaagcttga ttctcctttg attttaatac
     1321 ccttgatttt aataccctgg ccgagttgcc ggcacggttt cgaagcacgt tagaggggcg
     1381 atcggtaata attgccgata cgaatgtaat ttttataa
//
LOCUS       DASQSL010001674         1598 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_171674, whole genome shotgun sequence.
ACCESSION   DASQSL010001674 DASQSL010000000
VERSION     DASQSL010001674.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1598
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171674"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(251..757)
                     /locus_tag="VE844_17020"
     CDS             complement(251..757)
                     /locus_tag="VE844_17020"
                     /inference="COORDINATES: protein motif:HMM:NF014037.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mut7-C RNAse domain-containing protein"
                     /protein_id="HZC02986.1"
                     /translation="MTSLMQAECFVADAMLGKLVRWLRVMGIDVLYDPHVTDAHLLRC
                     AEREGRVLLTRDRRLANWRGPARRFLIESAYYHEQVREVVRAFQLAGRIAVFSRCLRC
                     NTPLRPVSRDLVAGKVPAYVFATQITFKTCDACDRLYWNGTHRDNMLRQLRAMLGDLL
                     PTDLGRPC"
BASE COUNT          372 a          456 c          437 g          333 t
ORIGIN      
        1 cactgcgggg ctcaaggtca tagggagaga ggtttcagcc attaattcac cgttcctttc
       61 tagctgattc tctgtcattg gtagggtgct attgtatgga ggacgatttt cccgtaacac
      121 gtgcggtggc gttataccat aattgaggca aagaggttta tcaacgagcg cctaactgct
      181 ctgccaagct ttatcactca gccccgcaaa ccctcaatac actcgaagac gtgctgtcgg
      241 ggttgaccca tcagcagggc ctcccaaggt cagtcgggag taggtcaccg agcatagctc
      301 ggagctgtcg gagcatatta tcacggtgcg tcccattcca gtacagccga tcgcacgcat
      361 cacatgtctt gaaggttatc tgcgtagcga agacataggc cggaactttc cccgccacaa
      421 gatctctgga gaccggccgt aacggcgtat tacaccggag acagcgggag aaaaccgcga
      481 tccttccagc caactgaaac gcccgcacga cctcacgcac ctgctcgtgg tagtacgcac
      541 tctcgataag aaaacgtcga gctggccctc gccagttggc cagacgacga tcgcgggtga
      601 gcagcactct cccctcacgc tcggcacacc gtaggagatg tgcatcggtg acgtgcggat
      661 cgtagagcac atcgatcccc atcacacgca accatcttac caactttccg agcatcgcat
      721 cggcgacgaa acactcggcc tgcatcaaac tggtcatggc aggacatcgt ggaagccaca
      781 cggggcttat gtatcgtctt cgccctcatg cctccgagag gcatgagggc gcttgcaagg
      841 ggtccacttt tcgcttgtcg cacctgacag ccaattttat aataccgcac cgaggcagct
      901 ctacgcctag cgctgatatc ggcgtggtga aaaggggagg ccgagccatg ggtagtggcc
      961 tctccctatg ctgatcaatg ggtgaggtac gcctatggtc cgcatcatcc cttaaagtcg
     1021 ataggcttgc aactgacaga ggaatgtacg caggcataca gctttctagc attcccagta
     1081 tgtgtcatcc tactacagcc gcatcaagcg atgacctgtg gcagttgcgc atgcccgagt
     1141 acctgcaggg ttcagaagct gtcagtaaaa atattggcct accgatcatg ggtcgctctg
     1201 ctgtaaaacc cggcgataac tcgagcttcc gtaacctgca tcatgctgcg gacctgggag
     1261 tcggcgctcc acttcaggtg ggtcaggttg tgaaggcggg aaaaagccca attgtctcgt
     1321 ccaaaaggcc tccagcagga gcgaatcttg aaagggagaa ggcgtgcagg ctcattgtgg
     1381 tggcgcggac gaactctgct ctcacggatt ccgcaggggc atactccagt cactcctgca
     1441 ctggtcgttc tcggagagca cgcaaggtcc cgaagggaga aacggtcatg aaacccaagg
     1501 tgtatgtctc acgcatgatc cctcaggaag ggctagacat cgttcgtgct gcctgcgaca
     1561 ctgaagtcaa cgccgatgat acccccctga cacaggag
//
LOCUS       DASQSL010001675         1605 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_161878, whole genome shotgun sequence.
ACCESSION   DASQSL010001675 DASQSL010000000
VERSION     DASQSL010001675.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161878"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="VE844_17025"
     CDS             <1..192
                     /locus_tag="VE844_17025"
                     /inference="COORDINATES: protein motif:HMM:NF021098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2382 domain-containing protein"
                     /protein_id="HZC02987.1"
                     /translation="QKEARVKEEVRVGKKVETERQTISEQVRKEEVEIEGAEKPQYST
                     EPGAERQSGRYEPKERSKP"
     gene            355..738
                     /locus_tag="VE844_17030"
     CDS             355..738
                     /locus_tag="VE844_17030"
                     /inference="COORDINATES: protein motif:HMM:NF024940.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC02988.1"
                     /translation="MRGRKPRRLLLAAHDKSILEQIARSRTLPWFQVQRARAVLAIAD
                     GERVQTVAFQMRCDPSTVWRLCRRYEEAGLEGVLAEVPRAGHPIEISPPATCPDCAIG
                     VSGTDRQGAAHYPLDQSGLGPRSGG"
     gene            650..1477
                     /locus_tag="VE844_17035"
     CDS             650..1477
                     /locus_tag="VE844_17035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002619292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC02989.1"
                     /translation="MQLACLEPIAKGLHITHWTSQDLAREAVVEGTVPSISARTVRRI
                     LHEVDLQPHRTRYWKTAHLDVRFKQRTEKILWCYANAQRLVHSGFWVVCVDEMPNLQA
                     LERTPIRRAIPGSIEQQEFEYTRHGTVTVLLFLIVHSGRMEATCPARKDAEHYLQALQ
                     QFCSRHRHLRGVFLIQDGDPTHTAAATTDYFNSHPWWRPRFTPAHTSWLNQAELLNDA
                     FSYRYLKRRSWHSRQELIDHIDAAWPEYNQLYAHPFEWTWTNQKMRRWFAEHATDPA"
BASE COUNT          355 a          464 c          455 g          331 t
ORIGIN      
        1 cagaaggaag ctcgcgtcaa agaagaagtg cgtgtgggca aaaaagtaga aaccgagcga
       61 caaaccattt cggaacaggt tcgcaaggaa gaggtcgaaa tcgaaggcgc agagaagccg
      121 cagtattcga cagagccggg agcggaaagg caatctggcc gctacgaacc aaaagaacga
      181 agcaaacctt aagacctgtt gtcacgcaat tgttcagccc gtcacagatg gtctttgtgg
      241 cgggctatcc gaacccatcc cgaatcctag tgtgcctggc cacaagtttt gcaagaaatt
      301 cggagcggct acaatgagat ctagcgatag tgccatcagc ctgggaagtc gctcatgcga
      361 ggtcgaaaac cacgtcgtct tttgctggcc gctcacgata agtctatcct cgaacagatt
      421 gcacgcagtc gcaccctgcc gtggtttcaa gtccaacgag cacgggcggt gttggccatc
      481 gccgatggcg agcgcgtcca gaccgtggcc tttcagatgc ggtgcgatcc gtccacggtc
      541 tggcggctgt gtcggcgcta tgaagaggcg gggctagagg gtgtcttggc cgaggtgccg
      601 cgcgcggggc atccgatcga gatttccccc cctgcaacgt gcccagattg tgcaattggc
      661 gtgtctggaa ccgatcgcca aggggctgca cattacccac tggaccagtc aggacttggc
      721 ccgcgaagcg gtggttgagg gcactgtccc ctcgatcagt gcgcgcaccg tgcggcgtat
      781 tctgcacgag gtggacttgc agccgcatcg cacacgctat tggaaaacgg cgcacctgga
      841 tgtacgcttc aaacagcgca ccgaaaaaat tctctggtgc tacgccaacg ctcaacgtct
      901 ggtgcacagc ggcttttggg tcgtctgtgt cgatgagatg cccaatctgc aggcgcttga
      961 acgtaccccc atccggcggg ctatccccgg ttcgatcgag cagcaggaat ttgagtatac
     1021 ccgccacggc accgtcactg tgctgctgtt tctgatcgtg cacagcggtc gcatggaagc
     1081 gacctgtccg gcacgtaaag atgctgagca ttacctccag gcattgcagc agttttgctc
     1141 tcgccaccgc cacctacgtg gcgtgtttct gatccaggac ggtgacccca ctcataccgc
     1201 cgccgctacc accgactact tcaacagcca cccttggtgg cggccgcgct tcactcccgc
     1261 gcatacctct tggctcaatc aggcggaatt gcttaacgat gccttcagtt accgttactt
     1321 gaagcgccgc tcctggcaca gccgccagga attgatcgac cacatcgacg ccgcttggcc
     1381 agagtacaat cagctgtatg cccatccgtt tgaatggacc tggaccaatc agaaaatgcg
     1441 acggtggttt gctgagcatg ccaccgatcc agcctgattt attttcttgc aaaacttgtg
     1501 gccagacata ctagtgtcct cagggattaa agcttgcccg atctccagca caatgggcgt
     1561 ggcgagaggt aatagctgaa ggctttccca ggtgttctct gtaag
//
LOCUS       DASQSL010001676         1551 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_106458, whole genome shotgun sequence.
ACCESSION   DASQSL010001676 DASQSL010000000
VERSION     DASQSL010001676.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106458"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(51..923)
                     /locus_tag="VE844_17040"
     CDS             complement(51..923)
                     /locus_tag="VE844_17040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015436904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HZC02990.1"
                     /translation="MPQNGNQKTAFVLAGGGSLGAVQVGMLKALARQHIVPDFVVGAS
                     VGAINGAYYAAEPNEEGVARLERIWLRLHRADIFPLSVVSSILCLFGKRNHLVTPAPL
                     RSLIESELPYQRLEDARIPCHVVATDVLDGTETALSSGPVASALLASAAIPVVFPTVP
                     INGRYLMDGGVANNTPISTAFNLGATRIIVLPTGMSCALEAPPHGAVALALHALNLLI
                     MRHLLSDIDRFSHRCELIVIPPLCPLTTTTYDFSQLGELIRRAEATTRLWLKKNGLES
                     RSAPSALLPHDHDH"
     gene            complement(1196..>1551)
                     /locus_tag="VE844_17045"
     CDS             complement(1196..>1551)
                     /locus_tag="VE844_17045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02991.1"
                     /translation="ADYLEHCLGKKSNYAHSEVMREGVKESLGLSEQGVPLMPSQDIK
                     QTGDEDIIGFHRHLPPLRLKRMDWRRFPILTQRQCIPAPRLSALPQLDDSLHENAWQR
                     TEQLTSPYIDPDMIQ"
BASE COUNT          320 a          417 c          466 g          348 t
ORIGIN      
        1 gggtttttgg gtcgctttat cttaatcagg gtcaatctgt gacttcgcgg ttagtgatcg
       61 tgatcgtgtg gtagcagtgc tgatggcgcg ctccggctct ccaacccgtt ctttttcagc
      121 cagagtcggg tggtcgcctc ggcgcggcgg atcagctcgc ccaactgcga gaagtcgtag
      181 gtggtggtcg tgagcggaca tagcggcgga atgacgatca gctcgcagcg atgggagaaa
      241 cggtcgatgt cgctgagcag gtggcgcatg atcaacagat tcagcgcgtg caacgcgagg
      301 gcgacagcgc cgtgcggagg cgcctccagc gcgcaagaca ttccggtcgg caggacaatt
      361 atgcgcgttg cccccaggtt aaaggccgtg gagatcggcg tgttgttggc aactccgccg
      421 tccatcaggt accgaccatt aatcggcacc gttggaaaga cgacggggat cgcagcactg
      481 gcgagcaacg ccgatgcgac tggacccgag gacagcgcgg tttctgtgcc atccagcacg
      541 tcggtggcca caacgtggca gggtatccgg gcatcctcca accgctgata agggagctcc
      601 gattcaatga gggatcgcaa cggcgcggga gtgacgagat gattcctttt cccgaagaga
      661 cagaggatgc tgctaactac cgagagtgga aagatatccg ctctgtgcag cctgagccag
      721 atgcgctcga ggcgcgcgac gccctcttca ttgggctcag cggcataata ggcgccgttg
      781 atcgcgccga cggaggcgcc gactacgaag tcagggacga tgtgttgtct ggccagcgcc
      841 tttagcatgc cgacttgcac ggcaccgagg ctgccgccgc ctgctaacac gaatgccgtc
      901 ttttggtttc cgttctgcgg catgacttaa cagctgctat gtcgtgccta tgctctaaca
      961 gtgattcacc ggacagaatt gcccgacgat tgttaataat acggacgccc tcgtcacgga
     1021 cttaaccttg ggatttgtcg ttgaattcgc tgtggctggt ccgtctattg tcgccgatca
     1081 tacgagcgcc accctacttt aattcaagac agcgtatgct cccattttct cctcaaccaa
     1141 cgaataggag cgaaccagga acggtgagcg actcagcata agaggcggcc tcaaactact
     1201 ggatcatatc agggtcaata tatggagatg tcagctgctc tgttctctgc catgcgttct
     1261 catgtaggct gtcatcaagc tgaggtagag ctgacagtct cggcgcgggg atgcactgcc
     1321 tttgtgtgag gatgggaaag cgtctccagt ccatacgctt aagcctcaag ggtggtaagt
     1381 ggcggtgaaa gcctatgatg tcctcatccc ccgtttgctt gatgtcctgg gaaggcatga
     1441 ggggtactcc ctgttctgag agtccaagac tttctttgac tccctcccgc ataacctcag
     1501 agtgagcata gttcgatttc tttcccaagc aatgctcgag atagtctgcg g
//
LOCUS       DASQSL010001677         1519 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_79641, whole genome shotgun sequence.
ACCESSION   DASQSL010001677 DASQSL010000000
VERSION     DASQSL010001677.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1519
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79641"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            70..681
                     /locus_tag="VE844_17050"
     CDS             70..681
                     /locus_tag="VE844_17050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013599026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="master DNA invertase Mpi family serine-type
                     recombinase"
                     /protein_id="HZC02992.1"
                     /translation="MMYGYIRVSTDKQTTENQRFEILKFADAKQLRVDAWIEETIGAT
                     KKLSHRKLGRLLSTMQQDDILIVTELSRLGRSLMEVMSILHTLMEQEVKVFTTKERYE
                     LGNNISSKVLAFAFSLSAEIERGMISSRTKEALARKKSEGKRLGRPKGRLSSVTKLSG
                     KDDLIRVYLDKKIPQSVIARLLNVHRLTVRNYILTRKLQKPSP"
     gene            806..>1519
                     /locus_tag="VE844_17055"
     CDS             806..>1519
                     /locus_tag="VE844_17055"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZC02993.1"
                     /translation="MPTHAHRRARQCSPGDPVQVLHLPCDLPYTRKLSSPVIHVINGT
                     RLADESEVPLKVTFDWLCAREDLTFFDVLHIHFFEGTPAETLHRVLDKCLTCGRRIIF
                     TVHETAPMFPRNGPAYQAGLKTICTAAHRIITLTRGSAAALLTLVPFIERRLVVIPHG
                     FVLHPDAPAWGRAGSGGQRVEYALYGAFRPNRDAYTLLLNWYFGLLHHRAHLNILSRA
                     IAPRDLHDPALHLPEIMDFL"
BASE COUNT          315 a          502 c          401 g          301 t
ORIGIN      
        1 atcttttaag acaggcatcc ctgtataatt tttacggcca ttttcctata ctaagataac
       61 ctaatgccta tgatgtacgg ctatatccgg gtctcaaccg acaaacaaac cacggaaaac
      121 cagcggtttg aaatcctcaa gtttgcggat gcgaagcaac tgcgggttga tgcatggatt
      181 gaagaaacca tcggcgccac gaaaaaactc tcccaccgga aattaggccg cctcctgtca
      241 accatgcaac aagacgatat cctcattgtg acggaactct cccgcctcgg ccgctccctc
      301 atggaggtga tgagcattct ccataccctc atggagcaag aggtcaaggt cttcaccacc
      361 aaggagcgct atgagctggg caacaacatc tcctccaaag tcctcgcctt tgccttctcc
      421 ctctccgcgg agatcgagcg ggggatgatc tcctcgcgca ccaaggaggc cctagcccgc
      481 aagaaaagcg agggcaagcg gttaggcaga cccaagggga gactctcctc ggtcaccaag
      541 ctctccggga aagatgatct catccgggta tatctggaca agaagatccc ccagagtgtc
      601 atcgcccgcc tcttaaacgt gcaccggctc accgtacgga attatattct cacccgcaag
      661 ctccagaaac cttccccgta agtgtcctag catgtgttga cggggggcgc cgttgtcccc
      721 ccatatgggt atggggatcg gacgcacctg cgggcgatgg accggtggcg ggcggcctct
      781 tccaccgagg gagggatagt gcgagatgcc cacacatgcg caccgccggg cgcgacagtg
      841 ctccccaggc gacccggtgc aagtgcttca cctgccgtgc gacctcccct acacccggaa
      901 actctcctcc ccggtgatcc acgtgatcaa cggcacacgc ctcgcggacg agagcgaggt
      961 ccccttgaag gtgacgtttg actggctctg tgcccgagaa gacctcacgt ttttcgatgt
     1021 cttgcacatc catttctttg agggcacgcc cgcggagaca ctccaccgcg tgctcgacaa
     1081 gtgcctcacc tgcggccggc gcatcatctt caccgtccat gagacggccc cgatgttccc
     1141 tcgcaatggc cccgcctatc aggcagggct caaaacgatc tgcaccgccg cccatcggat
     1201 cattacgctc acgcggggga gcgccgccgc gttgttgaca ctggtgccct ttattgaacg
     1261 ccgactggtc gtgatccccc acgggttcgt cctccacccc gatgcccccg catgggggcg
     1321 cgcgggctca ggcgggcagc gggtggagta cgcgctctat ggcgccttcc ggcccaaccg
     1381 cgacgcctac acgctgctcc tgaactggta tttcggcctg ttacaccatc gtgcgcatct
     1441 gaacatcctg agccgtgcca tcgcccctcg ggatctgcat gacccagcgt tacaccttcc
     1501 ggagatcatg gatttcctc
//
LOCUS       DASQSL010001678         3196 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_26453, whole genome shotgun sequence.
ACCESSION   DASQSL010001678 DASQSL010000000
VERSION     DASQSL010001678.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3196
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26453"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            175..1491
                     /gene="argA"
                     /locus_tag="VE844_17060"
     CDS             175..1491
                     /gene="argA"
                     /locus_tag="VE844_17060"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008931933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004042 - acetyl-CoA:L-glutamate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HZC02994.1"
                     /translation="MQNKPSQFVHWFRAASPYIHAHRSQSFVLSFGGEAVMDQGFPSF
                     IHDIALLSSLGIRLVLVVGIRPQIEQRLNEHGIKIHYAQGLRITDEEALIYVKEAAGT
                     VRIELEALLSMGLANSPMASARIRVAAGNFVIAKPLGVRDGIDFRHTGEVRRVDSEAI
                     NSCLGQGDIVVIPPLGYSPTGEVFDLEVHEVAVAVAESIRASKLIFLLEDQGIMDAEG
                     ELIRQLTQKEARYLLDKSDSREPGMIELKYAVRACRNGVPRTHLIDRRTDGALLLELF
                     SRDGIGTLISAAPFDHMRKAIIEDVGGIIELIAPLEAEGVLVRRSREKLEMEIDQFTV
                     LVRDGAIIGCAALYPYSSENIAELACLAVHSDYRDAGRGTELFSSLERQARLSGSRRL
                     FVLTTQTAHWFLERGFVEGRIEDLPVARKDLYNYQRNSKVFVKALG"
     gene            1498..2709
                     /gene="coaBC"
                     /locus_tag="VE844_17065"
     CDS             1498..2709
                     /gene="coaBC"
                     /locus_tag="VE844_17065"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018954815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015939 - pantothenate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HZC02995.1"
                     /translation="MNTLANKHILIGVTGGIAAYKSAELVRRLREREVNVKVVMTRSA
                     CAFIGPLTMQALSDQPVHIELLDPGTESVMGHIELARWCDAVLVAPASADFLAKLAHG
                     LADDLLSTLCLATTAPIIVAPAMNQQMWQAQATQSNRAVLESRGVRFFGPAEGGQACG
                     EVGPGRMLEPAAIIEALARLFHPGTLTGVRILVTAGPTREVIDPVRFISNRSSGRMGY
                     AIAQAAIEAGAKVILVSGPVALAAPQGLERIWVETAGEMLEAVMARIHDCDIFVAAAA
                     IADYRCQEPATQKLKKTAVSITLSLERTPDILAQVASRPRPPFTVGFSAETENLEKNA
                     LDKLVRKSLDMIVANEVGRPGVGFESDENALSVFWKGGKRELSRALKAQLARDLIEII
                     AQRYRERDQPL"
     gene            complement(2704..>3196)
                     /locus_tag="VE844_17070"
     CDS             complement(2704..>3196)
                     /locus_tag="VE844_17070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016352865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HZC02996.1"
                     /translation="VGIYTGLLRVTANEHQLAAVIGHEIAHVLANHSNARLSTTYATQ
                     MGLSALSVLSGAASPEKQQLLALLGLGAQVGILLPYGRDQESEADLIGLELMTRAGFD
                     PRESIGLWQNMGRAGGPKPPEFLSTHPSGETRINSLQQHIPKALAIYEQARAQGRDPH
                     CTS"
BASE COUNT          661 a          875 c          973 g          687 t
ORIGIN      
        1 ttgctaccga aggaccgttc ctcaataccc tgggcatgga aaccgtgata ctgggtcccg
       61 gagatatcgc ccaggcccat caagcggatg aatttttagc ggtcgaacga ttgcaaccga
      121 tggtcgagtt gctaagaaaa ctgatcgtga gcttctgtac agcgggttgt tgaagtgcag
      181 aataagccat cccaatttgt tcactggttt cgggctgcct caccctatat ccatgcccat
      241 cgcagtcaga gctttgtgct cagcttcggc ggtgaagcgg tgatggacca gggcttccca
      301 agcttcattc atgatatcgc tttgctcagt agcctcggga tccggctggt gctagtggtg
      361 gggatccgcc ctcaaatcga acagcgctta aacgagcacg ggattaagat acattatgca
      421 cagggtctgc ggatcaccga tgaagaggcg ttgatctatg tcaaggaagc ggccggcacg
      481 gtgcgcatcg agcttgaggc attgctgtcg atggggctgg cgaattcgcc gatggcgagc
      541 gcccggatcc gggtggctgc gggtaatttt gtgatagcta aacctttagg tgtgcgtgat
      601 ggtatcgact tccgtcacac cggtgaggta cggcgcgtgg atagcgaggc tatcaatagc
      661 tgtctcggac aaggtgatat cgtagtgatc ccgccactcg gctattcacc gaccggtgag
      721 gtgttcgatc ttgaggtgca tgaggtggca gtggcggtgg ctgaaagcat ccgcgcgagt
      781 aaattgatct tcttgctgga agatcaaggc atcatggacg ccgaaggcga gctgatccgg
      841 caactgaccc agaaggaagc acgctacctg ctcgataaat ccgactctcg agaaccgggt
      901 atgatcgagc tcaaatatgc tgtgcgcgct tgccgtaatg gcgtgccacg cacccacctg
      961 atcgatcgcc gcaccgatgg cgccttgctg ttagagctct tcagccgcga tggcatcggc
     1021 accctcatca gcgccgcccc ctttgaccat atgcgcaagg ctatcatcga ggatgtcggc
     1081 ggcatcatcg agctgatcgc gcctttagag gcggaaggag tcctggtgcg ccgctcccgt
     1141 gagaaactgg agatggagat cgatcagttc acggtgttgg tacgcgatgg cgctatcatc
     1201 ggctgcgccg cactctatcc gtattcctcc gagaacatcg ctgaactggc ttgcctcgcc
     1261 gtgcactccg attatcggga tgcaggccgc ggtactgagc tgttttcaag tctagaacgg
     1321 caggccaggc tcagtggatc caggcggtta tttgtgctga ccacccaaac cgcgcactgg
     1381 tttttggagc ggggatttgt cgaaggccgt atcgaggacc taccggtcgc gcgcaaggac
     1441 ctctacaact atcagcgcaa ttccaaggtg tttgtgaagg cacttggttg agcttagatg
     1501 aacaccctcg ccaataaaca tattctgata ggtgtgaccg gcgggatcgc tgcctacaag
     1561 agcgctgagc tggtgcgccg cctgcgcgaa cgcgaggtga atgtcaaagt agtgatgacc
     1621 cgttctgcct gtgcctttat tggaccttta acgatgcagg ccttatcgga tcagccggtg
     1681 catatcgaat tgctggatcc ggggacggaa tcggtgatgg gccatatcga gcttgcgcgc
     1741 tggtgcgatg cggtgctggt agccccggcc agcgccgatt tcctggcaaa actggcccac
     1801 ggcttggccg atgatctctt aagcacccta tgcctggcca ccaccgcgcc tattatcgtg
     1861 gcgcctgcca tgaaccagca gatgtggcaa gctcaagcga cgcaaagcaa tcgcgctgtt
     1921 ctggaaagcc gtggggtaag atttttcggg ccggcggagg gtgggcaggc ctgtggcgag
     1981 gtgggcccag gccgtatgtt ggaacctgcg gctattatcg aagcgctcgc ccggctcttc
     2041 catcccggga cactcaccgg cgtgcgcatt ctggtgacgg ctggaccgac tcgggaagtg
     2101 attgatccgg tgcgcttcat cagtaaccgt agctcaggaa ggatgggcta tgccatcgcg
     2161 caggccgcga tcgaggcagg cgccaaggtc atcctggtga gcggaccggt ggccttagcc
     2221 gcacctcaag gccttgagcg gatctgggta gagacggcgg gggagatgct ggaagcggtc
     2281 atggccagga tccatgactg tgatatcttt gtcgccgctg ccgccattgc cgattatcga
     2341 tgccaagaac ctgctacaca aaagctcaaa aagaccgccg tgtcgatcac cctgagctta
     2401 gagcgaaccc ccgatatcct ggcgcaggtc gcctcccgac ccaggccacc ctttaccgta
     2461 ggcttttccg cagaaacgga gaatcttgaa aagaatgcgc tggataaatt ggtccgcaag
     2521 tcgctggata tgatcgtggc caatgaggtc ggacggccag gagtggggtt tgagagcgat
     2581 gaaaatgcgc tctccgtatt ttggaagggc gggaagcgtg agctatcccg cgctctaaag
     2641 gcgcaactcg cacgggatct gattgagatc attgctcaac gctaccgcga aagggatcag
     2701 cctttatgaa gtgcagtggg gatctctacc ctgcgctcgg gcctgctcat agatcgcgag
     2761 ggccttgggt atatgctgct gcaggctatt gatacgggtc tctcctgagg ggtgcgtgga
     2821 gagaaactca ggcggctttg gcccgccagc ccggcccatg ttctgccaaa gcccgatgct
     2881 ctcccgcgga tcgaagccgg cccgggtcat cagttctaaa ccgatcagat ccgcctcgct
     2941 ttcttggtcc cggccatagg gtaacaagat ccccacctgg gcgccgagcc cgagtaaagc
     3001 caatagctgc tgtttctctg ggctggccgc gccgcttaaa acgctgagcg cagacaagcc
     3061 catctgggtg gcatacgtgg tggaaagcct ggcattcgaa tgattcgcca gcacatgggc
     3121 aatctcgtgg ccaataaccg ccgccagctg atgttcgttt gctgtcaccc gcagcaaacc
     3181 cgtatagata ccgact
//
LOCUS       DASQSL010001679         2514 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_135874, whole genome shotgun sequence.
ACCESSION   DASQSL010001679 DASQSL010000000
VERSION     DASQSL010001679.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2514)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2514)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2514
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_135874"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(245..478)
                     /locus_tag="VE844_17075"
     CDS             complement(245..478)
                     /locus_tag="VE844_17075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC02997.1"
                     /translation="MPDSGEAVAEHHGVENHGLEIRSVGHHVTLLLAYLLPLVILSKQ
                     IAVPIDYGIRVFHAPRDKLSSSDSTLSIRFCSS"
     gene            complement(462..2372)
                     /locus_tag="VE844_17080"
     CDS             complement(462..2372)
                     /locus_tag="VE844_17080"
                     /inference="COORDINATES: protein motif:HMM:TIGR03718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC/Alx family metal homeostasis membrane
                     protein"
                     /protein_id="HZC02998.1"
                     /translation="MSSLTRANKAVMFLKLAIGFVFLAFVSVASAAERDVVIVLDNSR
                     SMERFDAAGLVRSAVSRSLHELNGNVQAALVLASDTPTVAIPLIPLTVEAHARFRNAL
                     QQLTYRGNYSDIALALQQAVHDLVYSGREKAEKSILLIVGALNDPRDLAAVQFRLHVL
                     GYPVGSIDGVIGPKTREATREFQRDHQLVVDGQLSRELLARLEEAYAERWQAELSAKA
                     TRAGIKIVAVALGGESILSRRLAEKTSGEHFQVADVEGLPQVFERLKGTFTRAAEAPL
                     SVPPESAALPAPEAEAPGVKPPRKDVLTEEWMWIGFTLLILLLLILDLVVFHRKAHVI
                     KVGEALVLSGVWIGLALLFNVFIYFIYEYHGFGLDITEDEPDGRTAAVLFFTGYVVEK
                     SLSVDNLFVIAMIFSYFGVPPQYQHRVLFWGIFGALLMRAVLILVGVVLIERFHWILY
                     LFGAFLIFTAVKMLLDRHERDPRDNRLVQLTRRLFPITENYVGQRFTVRVDGKLMFTP
                     LVLALIGVESADLMFAVDSIPAIFAITDDPFILFSSNAFAILGLRSLYFALAGIMDKF
                     HYLRLSLALLLALIGVKMLLKDVLHTVPNITYYTLGAIALILTGGVVASLIRAQRMAN
                     KDEPEGPLARFR"
BASE COUNT          613 a          728 c          695 g          478 t
ORIGIN      
        1 cgcttagcgc tttgtctcca cgagtaaccc aacgataccc caaataacca cctatcgcta
       61 aaatcaacgc aatgaccaac ccgcccatcg gatcagctat cgctagtgct atccaagtat
      121 aaaggtctct catttcactt ctcgaagatc agcatcaagt aggcgaggaa caagagcaga
      181 tgcaccacgc cgagcaagac gttggtgcgt gcgctggcaa acgtgagggt gctcacggcc
      241 agcgtcaaga cgagcagaac cgtatcgaca gcgtcgagtc cgaggacgat agtttgtccc
      301 gtggcgcatg aaagacacga atgccgtagt cgatcggcac agcgatctgc ttggacagga
      361 tgacgagcgg gagcagatag gcgagcagca gcgtgacatg gtggccgacc gatcggattt
      421 ccagtccatg attctcgacg ccgtgatgct cagccacggc ttcaccggaa tcgggcaagc
      481 ggtccttcgg gttcgtcttt gttggccatg cgctgcgcgc gaatgaggga agcgaccaca
      541 ccaccggtca agataagggc aatcgccccg agcgtgtaat aggtgatatt gggcaccgtg
      601 tgcagcacat ccttcagcag catcttcaca ccgatcaacg ccaagagcag ggccaatgac
      661 agcctcaggt agtggaactt gtccatgatc ccggccaggg cgaagtacag cgagcgcagt
      721 ccaagtatgg caaaggcgtt gctgctgaaa aggatgaacg ggtcgtcggt gatggcgaaa
      781 atggctggga tcgagtccac ggcgaacatg aggtcggcgc tttccacccc aatcaacgcc
      841 agcaccaggg gcgtgaacat gagcttgcca tccacgcgca cggtaaaccg ctgacccaca
      901 tagttctcgg tgatggggaa cagccgcctc gtcaactgca ccaggcggtt gtcgcgggga
      961 tcacgctcgt gccgatccag cagcatcttg accgcggtga agattaagaa cgccccgaag
     1021 aggtacaaga tccagtggaa ccgctcgatt aacaccactc cgacgaggat cagcaccgcc
     1081 cgcatcagca gcgccccgaa gatcccccaa aacaacaccc ggtgctggta ttggggcggc
     1141 acgccgaagt aggaaaagat catcgcgatg acgaatagat tatctacgct taacgatttt
     1201 tccacgacat aaccggtaaa aaacaacact gctgccgtgc gaccatccgg ttcatcctcc
     1261 gttatgtcca gcccgaaacc gtgatactcg tagataaaat agatgaagac gttaaagagc
     1321 agggcgagcc cgatccagac accgctcaag acgagcgctt cccctacctt gatgacatga
     1381 gctttccggt ggaacaccac caggtccaag atcagcagta gcaggatgag gagggtaaag
     1441 ccgatccaca tccactcctc ggtaagcacg tcttttcggg gcggcttaac accgggcgct
     1501 tctgcctcag gcgctggaag ggcagcggat tctggtggca ctgatagagg cgcctctgcc
     1561 gccctggtga aagtaccctt taggcgttcg aatacctgtg gcagcccctc cacatctgcg
     1621 acctgaaaat gttccccaga ggtcttctct gccaatcgtc ggctaaggat agattcccct
     1681 cccaaggcca cagcgacaat cttgatcccc gcgcgagtcg ccttagcgga taactctgcc
     1741 tgccatcgct cggcataggc ctcctccaaa cgagccagga gctcacggct gagttgccca
     1801 tccaccacca attggtgatc ccgctgaaac tcccgtgtgg cctcgcgggt cttgggtccg
     1861 atcaccccgt caatggagcc aaccgggtaa cccaggacat gcaggcgaaa ctgcacggct
     1921 gccaggtcac gcgggtcgtt cagcgcgccg actatcaaca ggatcgattt ctctgctttt
     1981 tcccggccgc tgtacacgag atcatgaaca gcctgctgca gagccagtgc gatgtcagaa
     2041 tagttgccgc ggtaagtcag ttgttgaagg gcattgcgaa agcgcgcgtg tgcttccacg
     2101 gtgaggggta tgagcggaat agcaacagtc ggtgtgtcag aagccaggac caacgccgct
     2161 tgcacgttgc cgttaagctc gtgtagggat ctgctaaccg cagagcgcac gagtcccgcg
     2221 gcatcgaacc gctccatgct tcgagagtta tcgagaacaa tgaccacgtc cctttccgcg
     2281 gcggaggcga ccgagacaaa tgcaagaaag acaaagccga tcgccagctt tagaaacatg
     2341 acggctttgt tggctcttgt cagactcgac atcagcgcta ttctatgccg tggcagtacg
     2401 cgataacagc caattgtaga ggttatgttc gagattttcg aaacatggcg gcctggaatg
     2461 actagactta ccataagcat ctgtacctac tcctgtggtc ggtcgcatta gaac
//
LOCUS       DASQSL010001680         1055 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_148906, whole genome shotgun sequence.
ACCESSION   DASQSL010001680 DASQSL010000000
VERSION     DASQSL010001680.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148906"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1055)
                     /locus_tag="VE844_17085"
     CDS             complement(<1..>1055)
                     /locus_tag="VE844_17085"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HZC02999.1"
                     /translation="IENLPFFRKNQLLYLSTEELQDLADNLARVQPFLGKLIHDQSLR
                     GFFTVLSEAVTELSKGEEYELGSAFEKIGETLEAHVQGQRHHLSWQEMMSGRESGKND
                     RRALLIVKPYLDFSRLFPAEPAVMAIRGLARRLGLTPANGIRVRLTGDVALQYDEMKT
                     VTDNALVGSLLSLALVMAILIAGFGSSWLALATLFKLIIGLIFTAAFATLAVGELNFI
                     SVGFAMLYIGLGVEYAIHYCLYYKDLSRSVPLKEALRGTGRHIGAALVFTAFTSAIGF
                     YAFIPTPYSGIGELGLIVGTGMFISAALSLTFLPALLSLVPFRPSRKRRTSHVLMNLF
                     SFSSHHTKTVVIATCLLV"
BASE COUNT          271 a          283 c          296 g          205 t
ORIGIN      
        1 actaacaggc aggtagcgat gaccacggtc ttggtatgat ggcttgagaa ggagaataga
       61 ttcatcagca cgtggctagt ccggcgcttc cggctaggtc tgaagggaac caggctcaac
      121 agcgcaggca gaaacgtgag actcaaagcg gcgctgatga acatcccagt gcccacaatc
      181 aaaccgagct ccccgatacc cgagtaaggc gtagggatga aggcgtaaaa gccgatcgcc
      241 gaggtaaagg cagtgaatac cagggcagcg ccgatatgcc ggcccgttcc gcgaagcgct
      301 tctttgaggg gaacactgcg gctgagatcc ttgtaataaa ggcaatagtg aatggcgtat
      361 tctaccccaa gcccgatata gagcatggcg aaacccacgg agatgaagtt gagctcgccg
      421 acggccaagg tcgcaaaggc cgccgtaaag ataagcccaa tgatgagctt gaacagggtg
      481 gcaagcgcca gccacgaaga cccaaaaccg gcgatgagga tggccatcac taaagcaaga
      541 gataaaagac taccgaccaa agcgttatcg gtgaccgttt tcatctcatc atactgtaag
      601 gccacgtccc ctgtgaggcg cacccggatg ccgtttgcgg gcgtcagccc gagtctcctc
      661 gcgagcccac ggatcgccat gacggcaggt tcggccggga acaatctgct gaagtcgagg
      721 taaggtttga cgatcaggag ggcgcggcga tcattcttac ccgactcgcg tccactcatc
      781 atctcttgcc aggagaggtg atgacgctgg ccttggacat gggcctccag ggtttcgcca
      841 atcttctcaa aggcagagcc taattcatac tcttctccct tgctcaactc ggtgacagct
      901 tcactcagta cggtaaaaaa tccccgcagg ctctggtcat ggatgagctt gcccagaaaa
      961 ggctggaccc tggcgagatt atccgccaag tcttgcagtt cttccgtgct gagatagagc
     1021 aattggtttt ttctgaaaaa cggcaaattc tctat
//
LOCUS       DASQSL010001681         3654 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_79710, whole genome shotgun sequence.
ACCESSION   DASQSL010001681 DASQSL010000000
VERSION     DASQSL010001681.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3654
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79710"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..597)
                     /locus_tag="VE844_17090"
     CDS             complement(<1..597)
                     /locus_tag="VE844_17090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03000.1"
                     /translation="MGALDVIARRWNTSIKSNRPPEGRYLDEATRLEHTPALMAQAEA
                     FLRHHRILLPANSTLQRLASEQRERTRHQVYTRMLALLPTDMLPRLDALLHVEGAAVS
                     ALQVLKEPPGTPTPRAVLRLTAKLDHITQTGVLALELSWLNNNLQKVLTRQAYQASAY
                     RLRGMPTPQRYTVLVCFLTQTYQDTLDQLVGMYDKLITG"
     gene            complement(545..784)
                     /locus_tag="VE844_17095"
     CDS             complement(545..784)
                     /locus_tag="VE844_17095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03001.1"
                     /translation="MDRAGKEPRPREGIDIPFGPPPEEYLYRCPVCGVEDLVNEAIID
                     VAVGAAKFRGEYQGGMPKLGCPGCNSETMEYVDQE"
     gene            complement(753..1982)
                     /locus_tag="VE844_17100"
     CDS             complement(753..1982)
                     /locus_tag="VE844_17100"
                     /inference="COORDINATES: protein motif:HMM:NF016847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03002.1"
                     /translation="MIVEPSGHWNVFKQIFIDHWDGFKQVTPRYNTRYYDREVEKMLG
                     CGNPDQMGYIEYRCQHCGESVHRVAMTCKSSFCLRCAKVYVDDWVSQVSRMLHEGVIY
                     RHIVLTMPELLRPTFYRRSQDLLSPLMRCGVKCLDDVWSRVARKPLQGGYIVVIQTHG
                     RSGQYNPHLHIIATSGGWDKQAQQWVHLDYLPYGMLRKKWQWHLLTMLRQTLKNKEIN
                     RLVDPCYTRYPNGFVTNVQKGDVPSRYESLARYLAKYVVSPPISLRRIDDYNGESVGY
                     HYRSHHTDRVERERVHVYVFIGRMIQHVFPKGFQRIRYYGVQATKTFKKVKGLIQEAL
                     SKVKGIVKGAIKIISALTYRQRYEQSRGRDPLICRYCHEEMGVWKVWHPKYGVVYDEL
                     EAIKKGRYGSSRQRAPA"
     gene            complement(2362..3474)
                     /locus_tag="VE844_17105"
     CDS             complement(2362..3474)
                     /locus_tag="VE844_17105"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC03003.1"
                     /translation="MPATTILDIATSEQDQMLATLRRARYGYLLALHVLLLCAAGRNP
                     TEIATVLFCSRSSIYRIVRAYRNGTLGFRHNDQGHLLPPVRTTVLMPWLKRALLALLK
                     ARPSRYGWCRTRWSCATLAQTLKLKHGLDVSAETIRRWLHELGWVWRRAHLVAKDDDP
                     QRIERLGLIRFHHDYLGKREKLVFADELDIHLLPKVGAQWMPQGSRHEVMTPGQNEKH
                     YLAGALDASTGQLHYTLGDRKNNGLFRELLNGLDQSYPASQIDRIYVVVDNYIIHKAK
                     AVHQWLEKHPRFELLWLPTYCPKANPIERAFGEVHDKCTRNHQRKRLRDLVKDVEHHL
                     QANGPWKYRISHLYDEPEVTVEVDRLVAQHQPRVAA"
BASE COUNT          810 a         1019 c          992 g          833 t
ORIGIN      
        1 cccggtgatg agtttgtcat acatccccac cagttgatcc aaggtgtcct ggtaggtttg
       61 ggtgaggaaa cagaccaaaa cggtataccg ttggggcgtc ggcatgcccc gaagccggta
      121 ggcactggct tggtaggcct gtcgggtgag gaccttctga agattgttat tgagccacga
      181 caactccagg gctaacacgc cggtctgcgt aatgtgatcg agcttggccg tgaggcgcag
      241 aaccgctcgc ggcgtggggg tcccaggggg ttctttaagc acttgaaggg ccgaaaccgc
      301 agccccttcg acatgtaaga gggcatcgag acgtggcagc atatccgtag gcaacagcgc
      361 cagcatgcgg gtatagacct gatgtcgtgt ccgctcgcgt tgctcgctcg ccaggcgctg
      421 tagcgttgag ttcgcgggca acaagatacg gtggtggcgc aggaacgcct cggcctgagc
      481 catcagggcg ggcgtgtgtt cgagacgcgt ggcttcatca agataacgcc cttcgggcgg
      541 acgattactc ttgatcgacg tattccatcg tctcgctatt acatccaggg cacccaagct
      601 tgggcatacc gccttggtat tcaccgcgga atttagccgc acctaccgcc acatcaatga
      661 tcgcttcatt gacgagatcc tcgacgccgc acaccggaca gcggtagagg tactcctcgg
      721 gaggcggacc aaatggaatg tcgattcctt ccctaggccg gggctctttg cctgctcgat
      781 ccatatcgtc ccttcttgat ggcttcgagt tcgtcataga ccaccccata tttcggatgc
      841 caaaccttcc acacccccat ctcttcatga cagtagcgac agatcaaggg atcgcgaccc
      901 cgactttgct catagcgttg gcgataggtc aaggcggaga tgattttgat ggcgcccttg
      961 acgatgccct tgaccttgga tagggcctct tgaatcagac ctttaacctt tttgaaggtc
     1021 ttggtggctt gcaccccata atagcgaatc cgttggaagc ctttgggaaa aacgtgttga
     1081 atcatgcgac cgatgaagac gtacacatgg acccgttctc gctccacgcg atccgtgtga
     1141 tgcgagcgat agtgataccc cacgctctct ccattgtaat catcgatacg ccgaagcgaa
     1201 atcggtgggc tcaccacgta tttcgcgaga tagcgcgcta agctttcata ccgagacggg
     1261 acgtccccct tctgcacatt cgtcacaaat ccattgggat atctcgtgta acagggatcg
     1321 accaaccgat tgatctcttt gtttttcaac gtctggcgaa gcattgtcaa cagatgccac
     1381 tgccatttct tacgcagcat cccatacggt agataatcta gatgcaccca ttgctgggcc
     1441 tgcttatccc agcccccact ggtggcgatg atgtgcaaat gcgggttgta ctggccactg
     1501 cggccatgcg tctgaatgac gacgatatag cccccttgga gaggcttgcg agcgacccgg
     1561 ctccacacat cgtctaagca cttgaccccg catcgcatca aggggctcag caagtcttgg
     1621 gagcgccgat aaaacgtcgg cctcaggagt tctggcatgg tcaggacaat gtggcgataa
     1681 atgacgcctt catgcagcat ccggcttact tggctcaccc aatcgtcgac atagactttg
     1741 gcgcatcgca aacaaaacga tgacttacac gtcatggcga ctcgatggac actctcgcca
     1801 cagtgttgac aacgatactc gatatagccc atctggtcgg ggttgccgca gcccagcatc
     1861 ttctccacct cgcgatcata atagcgcgta ttgtagcgcg gcgtgacctg tttgaagccg
     1921 tcccagtgat cgatgaagat ctgcttgaag acgttccagt gcccagaagg ctcgacaatc
     1981 atcagagcgc accgagtgac gagtattggg atgttgacga tggcatgttt ttaccacgtc
     2041 taacgctctg ggtccacccc accatcgctc gtcaccagcg tgccttcacc caccctctcg
     2101 ccctggaacg acggagactt cagggcatct gaaaaatgca aattccttga ctatcaaggt
     2161 atttgtggcg aattgattac atctagcgta tttcctacgt atggaaagaa aatcttaccc
     2221 cagcgatgtc agggatgacg aaagggtctt gaaacatgtg cacagcccgc gcagggttcg
     2281 catgtcctta ctcctggacg tgttcacctg ctggctcgtc gcctgcgcga gcctaaaccg
     2341 gtccacatga gattcgtaca ctcaggcggc gactcgtggc tggtgctgag cgaccagacg
     2401 atcgacctcg acggtcactt cgggttcatc ataaagatga gatattctat atttccaggg
     2461 cccattggcc tgcaaatgat gctcgacatc tttgaccaaa tcgcgtaagc gcttgcgttg
     2521 atgattgcgg gtacacttgt cgtgcacctc cccaaaggcc cgttcaatcg gattggcttt
     2581 gggacagtac gttggcaacc acaacagttc aaatcgggga tgcttctcaa gccactgatg
     2641 gaccgctttg gccttatgaa taatgtagtt gtcgaccacc acataaatcc gatcgatctg
     2701 agaggctggg tagctttgat ccagcccgtt caacagctcg cgaaagaggc cattgttttt
     2761 gcggtcgccc agtgtgtaat ggagctggcc ggtcgatgca tccagcgcac ccgccaagta
     2821 atgcttctcg ttttgcccgg gtgtcatgac ctcgtgtcgg ctcccctgag gcatccattg
     2881 ggcgccgact ttgggcagta aatggatatc gagttcatcg gcaaacacca acttctcgcg
     2941 tttgcccaga taatcgtggt ggaatcggat gagccctaag cgttcgatgc gctgaggatc
     3001 atcatctttg gccaccagat gagcccgtcg ccacacccag cccagctcgt gcagccagcg
     3061 ccgtatcgtc tcggccgaaa cgtccaggcc atgtttgagc ttgagggtct gagccagcgt
     3121 ggcgcagctc cagcgggtgc ggcaccaacc atagcgcgac ggtctggcct tgagcaaggc
     3181 gagcagagcc cgcttgagcc acggcatcaa cacagtggta cgcactggcg gcaagaggtg
     3241 gccttggtcg ttgtgacgaa atccgagcgt gccattgcga tacgctcgta cgatacgata
     3301 gatgctggag cgcgaacaga acaaaaccgt ggcaatctcg gtggggttgc gaccagcggc
     3361 acacagtagt aagacatgca acgcgagcaa ataaccgtat cgtgcccgac gcaaagtcgc
     3421 caacatctgg tcttgttctg aagttgcaat atcgagtatg gtggtcgcag gcatggtgag
     3481 ctctccttga acgtggatcg ggatgaaaat ccaacgtagc atagagaacc tcactgtgcc
     3541 aatctcatgt ggaccggttt agtcgaacag gctcagctgt tgggcctcag atttttcgcc
     3601 ctgatggtat tggatatatc gacgaataat ctctgcggtc actttatcgc caac
//
LOCUS       DASQSL010001682         1054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_67635, whole genome shotgun sequence.
ACCESSION   DASQSL010001682 DASQSL010000000
VERSION     DASQSL010001682.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67635"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1054)
                     /locus_tag="VE844_17110"
     CDS             complement(<1..>1054)
                     /locus_tag="VE844_17110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018281872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISNCY family transposase"
                     /protein_id="HZC03004.1"
                     /translation="GLRGVHQVPTDNPIRSLLDAVDPAQVYPMFPYIFKGLQQAGVVE
                     SYRAVGNQLLLTLEGTRYFSSQKIHCPYCSTQHHANGSVTYFHSVLTPVVVKPGCDKV
                     IPLAPEFVQPQDGQAKQDCELNAAKRWLGRWGSEYASLGVTVLGDDLYCHEPFCRELL
                     AQGFGFILVCKPDSHPLLYEWVEFLERSGSVKTRVRKRWTGKRHEIDTYRYVGAVPLR
                     DGDDALVVNWCELTTTTLDGQVVYHNAFATSHAVEEANLGEVVAAGRSRWKIENENNN
                     TLKTKGYHFEHNYGHGQQFLSSLLATLILLAYGLHTLLEWMDDKYQLLRQKLPSRQRL
                     FNDIRALTTYLCFDSWD"
BASE COUNT          234 a          322 c          293 g          205 t
ORIGIN      
        1 cgtcccaact atcgaagcat aaataggtgg tcagcgcgcg gatatcgttg aacaggcgct
       61 ggcgcgaagg cagcttctgg cgaagcaatt ggtacttatc atccatccac tccagcagcg
      121 tatgtagccc ataggcgagc aagatgaggg tggctaacaa agacgagagg aactgttggc
      181 cgtgaccgta gttatgctcg aagtgatagc ctttggtttt cagggtgttg ttgttctcgt
      241 tttcaatctt ccaccggctg cgcccagcgg caaccacctc cccgaggttg gcttcctcca
      301 ccgcatgaga ggtggcaaac gcattgtggt acaccacctg accatccagg gtagtggtcg
      361 tgagctcaca ccagttcacc accaaggcgt cgtctccgtc ccgcaacggc accgcaccga
      421 cataccgata ggtgtcgatc tcatggcgct tgccggtcca ccgtttacgg acccgggttt
      481 taacgctgcc gctacgctcc aaaaactcga cccactcata cagcagcgga tgggagtcgg
      541 gtttgcacac caggataaat ccaaatccct gcgccaacaa ctcccggcaa aagggttcat
      601 ggcagtacag gtcatcgccg agcacggtca cacccaagga agcgtactcg ctcccccagc
      661 gtcccagcca acgcttggcc gcgttgagct cacaatcttg cttcgcttgg ccatcctggg
      721 gctgcacgaa ttccggggcc agcgggatca ctttgtcaca acccggcttg accacgaccg
      781 gcgtcagcac cgaatggaag tatgtcaccg agccgttggc gtggtgctgg gtcgagcagt
      841 acgggcaatg aatcttctgc gaggaaaagt agcgggtccc ctccagcgta agcagcaact
      901 ggttgcccac cgcgcggtag gactcaacca ccccagcctg ctgcaagccc ttgaatatat
      961 agggaaacat cggatacacc tgggcggggt ctaccgcatc aagtaacgaa cggatgggat
     1021 tgtccgtcgg gacctgatgc accccgcgca ggcc
//
LOCUS       DASQSL010001683         1031 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_148945, whole genome shotgun sequence.
ACCESSION   DASQSL010001683 DASQSL010000000
VERSION     DASQSL010001683.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1031
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148945"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          220 a          289 c          302 g          220 t
ORIGIN      
        1 attcgctgcg tgctcccaat tccgaagcaa gcgcatagtt aaataccaga agacggggcc
       61 tgcttaccgg tgtgggcatc caacggcggt aaaacctctc cggcaggcgc gcataactat
      121 tgtcgaagtc aaaaagcttt aaattctttg ccatgtttat tgccccttag aaaatagact
      181 ccctaaaagc aaaaaaacca ttatgaaatt aatacgaatt taggattgat ccactctata
      241 gttttccgcc ggtcagcgtc gtcgtatcgg ttacccgcag cgtcataatg agcatgatga
      301 ttgaacaagg ccatatggat acatggactg gccgctggag tggtcacgcg gggccaatcg
      361 tgcgtacaat cgacgtcagg cggcgtaacg caggggaaca gccgtgtgag cacagaggtc
      421 aggccatgag aagacggcag aggtggatag gagtactcgt catgatcgcc gtgctgctct
      481 tgatcagcac ggcgccaggg catgctgacc gtggcgggca tgggtacaga agccacgggt
      541 acagagggca ttggcataga gggtttcatc ggtccggagg agtgcgtctg ttcattagtc
      601 ccgggctcgt agtgccgttt gggtcctact gggggcccta ttcacccccg cctgtcgttg
      661 tggcaccctc tccacgggtc tatgtcgaac cctcgccgcc cccgccccac tactggtact
      721 attgcgacgc ctcgcaagcc tactacccgt atgttcaaca gtgccctgga gggtgggcgc
      781 caggtgttgc cgacaccccc gcactaggag gagatgacca gatgtcgcgc gtccaggccg
      841 ctatgccgct gggggtggca ggcattgggt acgggcacta gagggcgtca ggaaatcgcc
      901 gcttggccct tcgccgtcag gatcacggcg tcgtcgcgct tttcgagcag gccctcgtcg
      961 accaactcct ccaccgcggc gtgaaaggcg gccttctgct tagcgtcgta atggaccatt
     1021 ttctcagcat a
//
LOCUS       DASQSL010001684         1003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_36350, whole genome shotgun sequence.
ACCESSION   DASQSL010001684 DASQSL010000000
VERSION     DASQSL010001684.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36350"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1003
                     /locus_tag="VE844_17115"
     CDS             <1..>1003
                     /locus_tag="VE844_17115"
                     /inference="COORDINATES: protein motif:HMM:NF021351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Gldg family protein"
                     /protein_id="HZC03005.1"
                     /translation="SLEYELTKLIYDLAHPKKRVIGVISALPVFGAATDGRSGGGWNI
                     VSLLREAFEVRDLGTEPAEIAQDVDTLLLIHPKNLSDQTRYAIDQFVLKGGKAMVFVD
                     PQAEEDTASPDPQNPMAMPQTSSNLPDLMEKWGVKLVADKIAADLDHAIRVAYAGNRG
                     PQEIEYLPWLRLGPAELNQDDFVTSELNTVNLGSAGILERIEGATTEFRPLISTGKRS
                     MPYDREAVLFVRDPVGLLENFKPGDKELVVAARIRGPAKTAFPNGRPKKKDDDPPDPN
                     FVAESTAPINLVVVADTDVLADRFWVQFQNFLGMRIPSTIADNADFVINTLDNLGGN"
BASE COUNT          212 a          298 c          290 g          203 t
ORIGIN      
        1 agtcgcttga gtatgagctc accaagctca tctatgatct cgctcacccg aagaaacggg
       61 tgatcggggt tatcagcgcg ctgccggtgt tcggcgctgc tactgatggc cggtcggggg
      121 gaggctggaa tatcgtctcg ctcttgcgcg aggcctttga ggtccgggat ctcggcaccg
      181 agccggccga gatcgcccag gatgtcgata ccttgctgct tatccatccc aagaatctct
      241 ccgatcagac ccgctacgcc atcgaccagt tcgtgctcaa aggtggcaag gcgatggtgt
      301 tcgtggaccc tcaggcagag gaggacactg cctcgccgga cccccaaaac cccatggcga
      361 tgccgcaaac cagctcaaac ctgccggatc tgatggagaa atggggggtg aagcttgttg
      421 ccgacaagat agcggcggat ctggaccacg ctatccgggt agcctatgcc ggcaatcgcg
      481 gtccgcaaga gatcgaatac cttccctggc tgcgattggg acctgccgag ctcaaccaag
      541 atgattttgt caccagcgaa ctgaacaccg taaatctcgg cagcgccggg atcctcgagc
      601 gcatagaggg cgcgaccacg gagttcaggc cgctgatctc gaccggcaag cgctccatgc
      661 cctatgaccg cgaggcggtg ctctttgtgc gcgatccggt cggtttattg gaaaatttca
      721 agccgggcga taaggaactg gtggtcgccg cacgcatccg gggccccgct aagacggcat
      781 ttcccaatgg ccggcccaag aaaaaagacg atgatccccc tgatcctaac ttcgtggccg
      841 aatccacagc gccgatcaat ctcgtcgtag tcgctgatac cgatgtattg gccgatcgct
      901 tctgggtcca gttccagaat tttctgggca tgaggatccc ctcgacgatt gccgataatg
      961 ccgattttgt catcaatacc ctcgataatc tcggcggcaa cga
//
LOCUS       DASQSL010001685         1190 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_26513, whole genome shotgun sequence.
ACCESSION   DASQSL010001685 DASQSL010000000
VERSION     DASQSL010001685.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26513"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..351)
                     /locus_tag="VE844_17120"
     CDS             complement(<1..351)
                     /locus_tag="VE844_17120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03006.1"
                     /translation="MGRWWSGQQHRVLAGIDGLLRVVVIGDGKWVVAVDFAVRRPDPV
                     GAGGPCRDKLSWAREMIDARLAAWDKRGLHLPPPIITAESWFSDAKLMGHVRHRHQGT
                     LLVEGKVSYTFTLAD"
     gene            complement(370..834)
                     /locus_tag="VE844_17125"
     CDS             complement(370..834)
                     /locus_tag="VE844_17125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03007.1"
                     /translation="MSPAKRYANKQAKARRRRRHNAQERLERDRRQAQQAAEALPQAL
                     EELSLPETLVSEIEGRLQSQQKLLGKIVGVMFPALFGCGTPLELCRVRGWDKNWPSRL
                     LRVFPKRSWLKRLRRLGLEVLIALWRHVAGKSEATQSRWQWTWAVDDSVFHK"
BASE COUNT          261 a          367 c          306 g          256 t
ORIGIN      
        1 atcggccaag gtaaaggtat aactgacttt cccctctacc aacagcgtgc cttgatgccg
       61 atggcggaca tgccccatca acttggcgtc actgaaccaa ctctcggctg tgatgatggg
      121 cgggggcagg tgcaagccgc gcttgtccca ggctgccagg cgcgcatcga tcatctcccg
      181 cgcccagctc agcttatctc ggcaaggtcc tcccgcaccc acggggtcag ggcgacgcac
      241 ggcaaaatcc accgccacca cccacttgcc atcgccaatg accaccaccc gtaagaggcc
      301 atcaatgccc gcgagcactc ggtgttgctg gccgctccac caacgcccca ctaaccccag
      361 ctgctcaccc tacttgtgga acacagaatc atccacggcc caggtccact gccaacgact
      421 ttgggtcgct tcgcttttgc ctgcaacatg acgccaaaga gcgatcagga cttcaaggcc
      481 taagcgccgc agccgcttga gccaggagcg tttgggaaac acccgcaaca gacgtgacgg
      541 ccagttcttg tcccagcccc gcacgcggca caattccaaa ggcgtgccac agccaaagag
      601 ggcggggaac atcaccccca caattttgcc caacagcttc tgttgactct gcaagcggcc
      661 ttcgatttcg ctcaccaagg tctcaggcag gctcaactcc tccagggctt gaggcaaagc
      721 ctcagcggcc tgttgcgctt ggcgacggtc acgctcgagg cgctcctgag cgttgtgacg
      781 gcgtcggcgt ctagctttgg cttgtttgtt ggcatatctt ttggctgggg acatgatgcg
      841 ttcctttgta tcgtgatgag gggataggtg atagaaagga aaccatgtcc caccgtgcct
      901 cgatttcaag ccgacccatg aaaggcggtc atgcgccttc tgtgatttgc atcacccctt
      961 tgtgataact aactttcacg agccgtccgg cggcaacccg cgtcaatact tgatgaaatt
     1021 taaattcgga atagccagga ggtaagaaaa cgaacagggc ttactatcag gcgattgaga
     1081 agaaatcgtg ctttctcatg gttggcgtct gtttctacgg tcaatgccac gaaagcgtct
     1141 gcatcaacaa atatttttat cgcatcattc atggtctcct ttttggcgta
//
LOCUS       DASQSL010001686         1233 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_106559, whole genome shotgun sequence.
ACCESSION   DASQSL010001686 DASQSL010000000
VERSION     DASQSL010001686.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1233
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106559"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..478)
                     /locus_tag="VE844_17130"
     CDS             complement(<1..478)
                     /locus_tag="VE844_17130"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03008.1"
                     /translation="MSRVEHGTPMVEGLKRLLHLARQAGIRPRLLLLDRGFYSVAVIR
                     YLYQARYPCVMPVVRRGCSTDDPRGPSGTQVFAEIKRSGWHTYTLTNADKQTATVRTY
                     VHCRNWQGRRRRHGRQPLVYACWGIGIRSTHWIYQTYRLRFGIETSYRQLNEARIKT"
     gene            complement(482..874)
                     /locus_tag="VE844_17135"
     CDS             complement(482..874)
                     /locus_tag="VE844_17135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03009.1"
                     /translation="MQWQDHGPKCTVKVLLQVLFYAAGHLCSVFAACNQLRDVPSDQA
                     VRDALAALCPDPVPLEQRVNRLFAAQIPKSLRKRFQRVAIDLTLVPYHGQPHQQPTEI
                     YRGQAKGGTTHFHAYATAYIVRRGQRVT"
     gene            complement(1020..>1233)
                     /locus_tag="VE844_17140"
     CDS             complement(1020..>1233)
                     /locus_tag="VE844_17140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03010.1"
                     /translation="LRAIRFEQMWGLLGLSLSIAYSTAQQEHHRQARLSRRYKEGRKD
                     LSRLSLSRYIHQLNLARATLTPLVDQ"
BASE COUNT          255 a          341 c          380 g          257 t
ORIGIN      
        1 tggttttgat ccgggcctca ttgagttggc ggtagctggt ctcaatcccg aagcgcaggc
       61 ggtaggtttg ataaatccag tgagtgctgc ggataccgat tccccaacag gcatacacca
      121 gaggttggcg cccatgccgt ctgcgccgcc cttgccagtt gcggcagtgc acgtaggtcc
      181 gcacggtggc ggtctgctta tcggcattgg tcagggtata ggtgtgccag ccactgcgct
      241 tgatctctgc aaagacctgg gtgccgctgg gaccccgtgg gtcatcggtg ctgcatccac
      301 ggcggactac tggcatgaca caggggtagc gtgcctggta gagataccgt atgaccgcca
      361 cgctgtagaa gccccggtca agcaggagca aacgcgggcg gatcccggcc tgccgggcca
      421 ggtgtaacaa ccgcttgagt ccctcgacca tcggggtccc gtgctcaacg cggctcaagg
      481 cttaggtcac gcgctgaccc cggcgcacga tataggccgt ggcataggca tgaaagtggg
      541 tcgtaccgcc tttggcctga ccccggtaaa tctcggtggg ctgctgatgg ggttggccat
      601 ggtaggggac caaggtcagg tcgatcgcca cgcgttggaa ccgcttgcgt aggcttttgg
      661 ggatctgagc cgcaaacagc cgattcactc gctgttccaa tggaaccggg tcgggacaca
      721 acgccgcgag cgcgtcgcgc accgcttggt cgctaggaac atcccgcaac tggttacagg
      781 cagcaaacac cgagcagagg tggccggcag cgtaaaacag cacctgcaac aggaccttca
      841 cggtgcactt ggggccatga tcctgccact gcaagtggaa ctctaatagc gcggccgcat
      901 agtcctagat acgggtcggg gttaggctgg ttcgtaccca gaaattctct ggaaaaggtt
      961 aaagccctgc ctaccctcat agaatacgag agttttgatt gtttttggga atggttaact
     1021 tactggtcga ctaacggtgt gagggtagcc ctagcgaggt tcaattggtg gatataccgg
     1081 cttaacgaaa gccgactcag atcttttcta ccctctttat agcgtcgaga caaacgcgct
     1141 tgccgatgat gttcctgttg tgcggtgcta taggcaatgg acaatgacaa acccagcagg
     1201 ccccacatct gttcaaatcg gatcgcccgc agg
//
LOCUS       DASQSL010001687         2726 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_135992, whole genome shotgun sequence.
ACCESSION   DASQSL010001687 DASQSL010000000
VERSION     DASQSL010001687.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2726
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_135992"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1290)
                     /locus_tag="VE844_17145"
     CDS             complement(<1..1290)
                     /locus_tag="VE844_17145"
                     /EC_number="1.2.7.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009202345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran dehydrogenase subunit B"
                     /protein_id="HZC03011.1"
                     /translation="MTENIRTVEHATCTFCGCVCDDMDLTVDLEKKRITKAANACILG
                     RAWFAEHTIEARPYALIDGKEASTAEAVEAAAQILVNARLPITYGLSDTTCEAQRVAV
                     AISDMIHGNVDTTTSVCHGPSGIAFQGVGESTATLGEVKNRADLVIYWGGNPAESHPR
                     HFTRYAVTPKGMYIPNGRKDRTVVLVDVRRTPSAPVADIFLQIKPGSDFELAWALRAL
                     VKGQPVDSIIEEKTGIALSTLEDLAKRMKNCRYGVLFFGMGLTMTRGRHFNSGAVLAL
                     ATDLNEYTHFVAKPVRGHGNVTGADNVVSWQTGYPFGVNFSRGYPRFNPGEFTTVDLL
                     SRGEADAALIIASDPGSNFPRVAIEHLRRIPVIVLDTKPTETTKLARVAFTTATYGIN
                     TAGTVYRMDDVPITMRAAFESPYPSDEEVLTAIRDRVR"
     gene            complement(1330..1677)
                     /locus_tag="VE844_17150"
     CDS             complement(1330..1677)
                     /locus_tag="VE844_17150"
                     /inference="COORDINATES: protein motif:HMM:NF013717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /protein_id="HZC03012.1"
                     /translation="MAETMILIPGRTSKQGTSLNAGKLKSEYLEITSTLEINMDDMAR
                     LGLKEGDRVRLKNEVGETTVRCKGRKATDLPAGVLFMAYGPAATQLMDSDTAGSGMPI
                     SKHIVVEVERLTT"
     gene            complement(1834..>2726)
                     /locus_tag="VE844_17155"
     CDS             complement(1834..>2726)
                     /locus_tag="VE844_17155"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HZC03013.1"
                     /translation="MGIWLLAPKVAVQVDQLVEQLPRSIGQLKALLGQYEWGRHIVAN
                     VPNAQEMIPDQIQGLGNVLGKVASFFSMTFGAIAGFLLFLFIGLFFAAEPSLYINGLI
                     RLVPMAKRTRTRAVLDAIGHALRWWLIGRVFSMAVVAAGTALGLYLLGVPLAITLGLI
                     AGLLDFVPNIGPILATVPAALVALLQSPLQVLYVVLLYVAVQLVEGYLLTPLVQRYTV
                     ALPPVLTIVGVVLLGVLLGGLGLALAAPLTIVLFILVKRLYIEDVLGDVMEAPGEQYN
                     SSAATPYPSGVFRSWRTPSS"
BASE COUNT          594 a          809 c          760 g          563 t
ORIGIN      
        1 gcgtacccgg tcccggatcg cggtcagcac ttcttcgtcg ctcgggtaag gcgattcaaa
       61 agcggctctc atcgtgatcg gcacatcgtc catacggtag actgtgcccg ccgtattgat
      121 gccataggtc gccgtggtaa acgccacgcg cgcaagtttc gtagtctcgg tcggtttggt
      181 atcgagcaca atgaccggga tcctgcgcag gtgttcaatt gccacccgtg ggaagttcga
      241 gcccggatcg ctcgctataa tgagcgccgc atccgcctcg ccgcgggaca acagatcgac
      301 cgtggtaaac tcgcccgggt taaagcgcgg atagccccgg ctgaaattga cgccgaacgg
      361 gtaacccgtc tgccacgaga ccacattgtc agcccccgtc acattgccgt gcccgcgcac
      421 cggtttggcc acgaagtggg tgtattcatt gagatcggtg gcgagcgcca gcacggcacc
      481 ggagttgaaa tgccgccccc gggtcatggt caggcccatg ccgaagaaca aaacgccata
      541 gcggcaattc ttcatgcgct tggccaaatc ctccagggtc gagagcgcga tcccggtctt
      601 ttcctcgatg atggagtcga ccggctgccc tttaaccagg gcccgcagtg cccaggccaa
      661 ctcgaaatcg ctgcccggtt ttatttgcag aaagatatct gcgaccggcg cgctcggcgt
      721 acggcgcaca tcgaccaaga ccacggtgcg gtcctttctg ccgttcggga tatacatccc
      781 cttgggggtc acggcatagc gggtgaagtg ccgggggtgc gactccgccg ggttcccacc
      841 ccagtagatg accaggtctg cccggttctt gacctcgccc agggtggcgg tgctctcgcc
      901 tacgccttga aaggcgatac ccgaggggcc atggcatact gaggtcgtgg tgtcgacatt
      961 accatggatc atgtcgctga tggcgaccgc gacccgttgg gcctcacagg tggtgtcgct
     1021 gagcccatag gtgatgggga gacgggcatt gaccaggatc tgcgccgccg cctccaccgc
     1081 ttcagcggtg ctcgcctcct tgccgtcgat gagggcataa ggacgcgcct cgatcgtgtg
     1141 ctctgcaaac caggctcggc ctaatataca ggcattggcc gccttggtaa tgcgtttttt
     1201 ttcgaggtcg acagtgagat ccatgtcgtc acagacacag ccacagaagg tacaggtggc
     1261 atgttcaaca gtgcggatat tctcagtcat gatattaatc ctgattggct taaaccactc
     1321 tattttcaat taagtggtaa gtcgctcgac ctctaccaca atatgtttgg agataggcat
     1381 tccgctaccc gccgtatcgc tatccattaa ttgggtcgca gctggtccgt aggccataaa
     1441 cagcacgccc gcgggtaggt cggtcgcctt tcgtcctttg cagcgtaccg ttgtttcccc
     1501 cacctcgttc ttgagccgta cccggtcacc ctccttgagt ccaagccgag ccatatcgtc
     1561 catattgatc tccaaggtgg aagtgatctc aaggtattcg gacttgagct tccccgcgtt
     1621 cagagaggtt ccttgtttgc tggtgcgacc tggaatgagg atcatggtct cagccatgtt
     1681 atttctaagc tccgtatgtg aagatcctag aacgaccaaa gtttaatagg ctaaatagag
     1741 ggaagagaaa cacgcttcgc cgtttttctg ttcctttaca tatcatagga tatttctatg
     1801 catgtctcaa ccgcatcgtc aatttctata aagctacgag cttggggtcc gccatgaacg
     1861 gaatacaccg gaaggataag gtgtagccgc tgaggaatta tactgctcac ccggcgcttc
     1921 catcacatcg cccagcacat cctcgatata cagcctcttc accaggataa acagcacgat
     1981 cgtgagaggg gcggccaagg ccaggccgag cccgcccaac aggacgccta gcaatacgac
     2041 accgacgatg gtgaggaccg ggggtagagc gactgtatag cgctgcacca gaggcgtgag
     2101 caggtatccc tccaccaact gcacagccac atagagcaag accacataga gcacctgcag
     2161 tggactctgc aacagggcta cgagcgcagc cggtacggtc gcgaggatcg ggccgatatt
     2221 tgggacgaag tccaaaagtc cggcgatgag accaagcgtt atcgccagcg gtacacctaa
     2281 aaggtatagc ccgagcgccg tgccggcggc gaccacggcc attgaaaata ccctgccgat
     2341 gagccaccac ctgagcgcat gcccaatagc atccagcacc gcgcgggtgc gcgtacgctt
     2401 ggccatgggc accagccgaa taagtccatt gatataaagg ctcggctcgg ccgcaaagaa
     2461 aaggccgata aacaaaaaca gcagaaaacc cgcaatcgca ccgaaggtca tggagaagaa
     2521 gctcgctacc ttgccgagca cgtttcccaa tccctggatc tggtcgggga tcatctcctg
     2581 ggcgtttggc acattggcga cgatatgccg tccccactcg tattgtccaa gcagcgcctt
     2641 gagctgcccg attgagcgcg gcaactgctc gaccagctga tccacctgca cggctacttt
     2701 cggcgcgagc agccatattc ccatgc
//
LOCUS       DASQSL010001688         1801 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_135993, whole genome shotgun sequence.
ACCESSION   DASQSL010001688 DASQSL010000000
VERSION     DASQSL010001688.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1801
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_135993"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..259
                     /locus_tag="VE844_17160"
     CDS             <1..259
                     /locus_tag="VE844_17160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011627824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HZC03014.1"
                     /translation="VFDKAKAARFTADVRISELNELHRVIRGATQRLVLAIVGIGFVI
                     SASVLLGLDDHAPAMLGKASYMVWVLGGLGAMILVGVLAEK"
     gene            256..1146
                     /locus_tag="VE844_17165"
     CDS             256..1146
                     /locus_tag="VE844_17165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013967150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 domain-containing protein"
                     /protein_id="HZC03015.1"
                     /translation="MNSLSIHYQLGSHGYPVQGAGLGLRRAHLDRLADAIPSQIDFME
                     LAPENWIQVGGRWGRRFHAIAEQIPLICHGLSLNLGGPVPLDETFIGQLKHFLDTYKI
                     RCYSEHLSYCADEGQLYDLLPIPFTEEAVHYVAERIRRTQDILERRIAVENVSYYCAP
                     GKAMEEIEFMNAVLEEAQCDLLLDVNNIFVNSINHGYDPVKYLTSLAPGRIAYAHIAG
                     HYRQAADLIVDTHGADVIGQVWALLAIAYERFGVFPTLLERDFNIPPLEALLTEVDRI
                     AKLQREWINCSGPEKITPLS"
     gene            1220..>1801
                     /locus_tag="VE844_17170"
     CDS             1220..>1801
                     /locus_tag="VE844_17170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005667317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HZC03016.1"
                     /translation="MLTTLTALTALKRGDASARLPLEWTGLAGKVAETFNDVVDLNAR
                     MAEELERLSRVVGKEGKLKQRATLGDVKGFWHDAMESINSLIDDLVHPTSEVARVIGA
                     VAQGDLSKSMALEVDGRALEGEFLRTAKTINKMVEQLGTFSAEVTRVAREVGTEGKLG
                     GQAKVKGVAGTWKDLTDSVNSMAGNLTDQVRYIA"
BASE COUNT          369 a          483 c          560 g          389 t
ORIGIN      
        1 ggtgttcgat aaagcaaagg cggctcggtt taccgcagat gtgcggatct cggaactcaa
       61 tgaactgcac cgtgtgatcc gcggcgccac gcagcgcctg gtacttgcga tcgtgggcat
      121 agggtttgtg atcagcgcct ccgtgctatt ggggcttgat gaccatgcgc cggccatgct
      181 cgggaaggca tcttacatgg tgtgggtgct tgggggattg ggtgctatga tcctcgtggg
      241 ggtgctcgct gaaaaatgaa ttccttatca atccattacc aactcggttc ccacggttat
      301 ccagtgcagg gagcgggcct gggtctgcgg cgagcacatc tggatcggct tgcagacgct
      361 attccatctc aaatcgattt tatggaactg gctcctgaga actggatcca ggtgggtggg
      421 cgttggggac gccgattcca tgctattgcc gaacagatcc cgcttatctg tcacggctta
      481 tccctaaatc ttggggggcc cgtgccgctc gatgagacct tcatcgggca gctcaagcac
      541 tttctggata cctataagat ccgctgctat agcgagcatt tgagctattg cgccgatgaa
      601 gggcagcttt atgatctgct gcctatcccg ttcactgagg aggcggtgca ttatgtggcc
      661 gagcggatca gaaggacaca agatatcctg gaaagacgca tcgccgtgga aaacgtttcg
      721 tattattgcg cccccggcaa ggccatggag gagatcgagt tcatgaacgc ggtgcttgaa
      781 gaagcgcagt gcgatctcct gctcgatgtc aataatatct tcgtcaacag tattaatcac
      841 ggctacgatc cggtgaaata tctcaccagc cttgctcccg gccgtatcgc ctatgcccac
      901 atcgccggcc attatcggca ggccgccgat ctcatcgtcg acacccatgg cgctgatgtg
      961 attggccagg tatgggcgct cctggcgatc gcgtatgagc gttttggtgt gttccctaca
     1021 cttttggagc gcgatttcaa catcccccct ttggaggcgc tgcttactga agtcgatagg
     1081 atcgccaaac tgcaaaggga gtggataaat tgttcaggtc ctgagaagat aacccctcta
     1141 tcctgagatg agaagagagg cgcctatgcg cgtttttgag cagaatgaac cggtgggtct
     1201 tggcaacgag cgagaggtga tgctgaccac gctcaccgcg ctcaccgcac tcaagcgcgg
     1261 cgatgcctcg gcccgtctgc cgcttgagtg gaccggcctg gccggcaagg tggccgagac
     1321 cttcaacgac gtggtggacc tcaatgcgcg gatggccgag gaacttgagc gattgagtcg
     1381 ggtggtgggc aaggaaggca agctcaaaca gcgggccacg cttggggacg tcaagggctt
     1441 ctggcacgat gccatggagt ccatcaattc gctgatcgat gatctggtcc acccgaccag
     1501 cgaggtggcc cgcgtgatcg gcgccgtcgc tcaaggggac ctgtcgaaga gtatggcgct
     1561 tgaggtcgac ggccgagccc tcgaaggcga attcctgcgt accgccaaga ctatcaacaa
     1621 gatggtcgag caactcggca cgttttctgc tgaggtgacg cgcgtggccc gcgaggtggg
     1681 caccgagggc aagctcggcg gtcaggccaa ggtgaagggg gtggccggga cctggaaaga
     1741 cttgaccgac tcggtgaact ccatggccgg caacctcacc gatcaggtgc gctatatcgc
     1801 c
//
LOCUS       DASQSL010001689         1161 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_26537, whole genome shotgun sequence.
ACCESSION   DASQSL010001689 DASQSL010000000
VERSION     DASQSL010001689.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26537"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1035
                     /locus_tag="VE844_17175"
     CDS             <1..1035
                     /locus_tag="VE844_17175"
                     /inference="COORDINATES: protein motif:HMM:NF018488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0236 family protein"
                     /protein_id="HZC03017.1"
                     /translation="DALGLRSGRFQLDVQQTAADLATELPYETASTLFGRLTGIGVSS
                     ERMHTLTHQAAEGLTVLDVAPSRDQIDQLVAKVAAGRFRRPVLVLGMDGAYVPSRPES
                     ARGRRPGQARQRARRARWRHEWREAKGFRFSLLDGDRIVHVLSWHQVQNEHDLGEALR
                     QVKETGFIPEETVRLCVVCDGAEWIWKHIQALFPQACQVLDYYHCSAYLHKVAKAQYA
                     DPLQAQEWAEATLTRLYLGKVGQVLGGLRRMQPTSDEALKAIDNCWIHLNEHRGRTTY
                     RKFRRGGYPLGSGGMESANKFICHVRLKRSGAWWYEENSNQMLALRCAKYNGTFDRVF
                     ARFQRQKVEA"
     gene            1046..>1161
                     /locus_tag="VE844_17180"
     CDS             1046..>1161
                     /locus_tag="VE844_17180"
                     /inference="COORDINATES: protein motif:HMM:NF014766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HZC03018.1"
                     /translation="MLPAAIDIALWDLKGKIFAQPIYKLLGGAWRTELPFYAS"
BASE COUNT          228 a          314 c          373 g          246 t
ORIGIN      
        1 gacgcattgg gcttgcgctc aggccgcttt cagcttgacg tgcaacagac agcggccgat
       61 ttggcgaccg aactcccgta tgaaacggct tcgacgttgt ttggccgact cacgggcatc
      121 ggcgtcagca gtgagcgtat gcacaccttg acccatcagg ctgccgaggg actcacggtg
      181 ttggatgtag cgccgtctcg tgaccagatc gatcagctcg tggctaaggt ggctgcgggt
      241 cgctttcgcc gcccggtgct ggtgctcggg atggatggcg cgtacgtacc gtctcgtccc
      301 gagagcgctc ggggacgccg tccaggtcaa gcgcgccagc gagcaaggcg ggcgcggtgg
      361 cggcacgaat ggcgcgaagc caaagggttt cgtttttccc tgctcgacgg cgatcgcatc
      421 gtgcatgtcc tgagctggca ccaggttcag aatgaacacg atctaggcga agccttgcgc
      481 caggtcaaag agacgggctt cattcccgag gagacggtac ggctttgtgt ggtttgcgat
      541 ggcgccgagt ggatatggaa gcacattcag gcgttgtttc cccaggcttg tcaggtactc
      601 gattattacc actgctcggc gtacctccac aaagtggcca aggcacaata tgccgacccc
      661 ttacaagctc aggaatgggc cgaggccacc ctgacccgtt tatacctggg caaggtgggg
      721 caggtgctcg gtggcctgcg gcggatgcag ccgacctctg acgaggcact caaagcgatt
      781 gataattgct ggattcatct caatgagcat cgcggtcgga cgacgtatcg caagtttcgc
      841 cgtgggggtt acccgttggg tagtgggggg atggaatcgg cgaacaaatt tatctgccat
      901 gtgcgcttga aacgctcggg tgcctggtgg tacgaggaaa acagcaatca gatgttggcg
      961 cttcgctgtg cgaagtataa cggcaccttt gatcgggtgt ttgcgcgatt tcaacgtcag
     1021 aaagtagagg cgtaagaatc acctaatgct cccggcggcg atcgatatcg cgctgtggga
     1081 cctgaaaggc aaaattttcg ctcagcccat ctacaaattg ctgggcggcg cctggcgcac
     1141 tgagctgccg ttctacgcct c
//
LOCUS       DASQSL010001690         1161 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_67700, whole genome shotgun sequence.
ACCESSION   DASQSL010001690 DASQSL010000000
VERSION     DASQSL010001690.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67700"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..571
                     /locus_tag="VE844_17185"
     CDS             <1..571
                     /locus_tag="VE844_17185"
                     /inference="COORDINATES: protein motif:HMM:NF016290.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LptE family protein"
                     /protein_id="HZC03019.1"
                     /translation="RYLWAALSISGCGYSFAGRSEAFPADIRTVYIEPFINQTRNVGL
                     EKELTSALRSEFYRRGELRVVDTVDQADGIIAGVVRSFESHVASVNRRDEVLQYETAI
                     IVDASLRRREPNEIIWRSQGTRLTDIYGGSRAAVVTTSSEFKTGTLNASDVRRLTDIQ
                     LTETENRAVRGQLVERFARELHQRLMEMF"
     gene            950..>1161
                     /locus_tag="VE844_17190"
     CDS             950..>1161
                     /locus_tag="VE844_17190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005010510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid II flippase MurJ"
                     /protein_id="HZC03020.1"
                     /translation="MNEEVGKLTRAAGVVGFFTLLSRVSGLFRDVVIGFLFGAQGAAD
                     AYFVAFRIPNLLRRLTAEGALTVAFIP"
BASE COUNT          237 a          304 c          329 g          291 t
ORIGIN      
        1 ccgctatctc tgggccgctc tatccatctc tggctgcggc tactcatttg ctggacgcag
       61 cgaggcgttt ccggccgaca ttcgtacggt ttacatcgaa ccgttcatta accaaacgcg
      121 caacgtcggt ctggagaaag aactgacttc ggcgctgcgc agcgaatttt accggcgcgg
      181 ggagctccgc gtcgttgata ctgttgatca ggctgatgga atcatcgcgg gagtagtgcg
      241 ctcattcgag agccatgtcg cttccgttaa tcgcagggac gaagtcctcc aatatgaaac
      301 cgcgataatc gtcgatgcat cgctgcgtcg gcgagagcca aatgagatca tctggcggag
      361 ccaaggcacg cgcctgacgg atatttatgg cggctcgcga gcggcggtag tgacaacatc
      421 gtcggaattc aaaaccggaa cgttgaacgc gtccgatgtt cggcggctga ccgatatcca
      481 actaactgag accgaaaacc gcgcggtgcg gggacaacta gtcgaacgtt ttgcacgaga
      541 gctgcatcaa agattgatgg aaatgttcta acgccgatgg gtccgtcggc gcattcgata
      601 cacagcggga tatgattgct atacagatgg agaggtgcga gcggccgccc gcgccagtcg
      661 ggatagccag cgcgatgcag tatttcgatt gatgattccc ttgctcacag ccttacccaa
      721 tgctttattg acggctttga tgtcagcggc cggagaatcg gcactctgac ctgagactgc
      781 ttggcgcgct tttttgagca aggttcgtac ctttgatctc gtctcctggt ttcttgcctt
      841 tcgtttaaga ctttgcctgt gtctcttaat aactgacgga tgaactgcca aagctagcct
      901 cctaagaaat gtttccattc acttatcacc tcgggttatc ggagtcaatt tgaacgagga
      961 agtcgggaag ttaacacggg ccgccggggt ggtcggtttc ttcaccttgc tcagccgggt
     1021 ctcgggcttg ttccgcgatg ttgttatagg gtttctgttc ggcgctcagg gtgccgccga
     1081 tgcctatttc gtcgccttta gaatccccaa tctgttgcgg cgcctgacag cggaaggtgc
     1141 tttgaccgtt gcatttattc c
//
LOCUS       DASQSL010001691         1065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_36380, whole genome shotgun sequence.
ACCESSION   DASQSL010001691 DASQSL010000000
VERSION     DASQSL010001691.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36380"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            102..716
                     /locus_tag="VE844_17195"
     CDS             102..716
                     /locus_tag="VE844_17195"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HZC03021.1"
                     /translation="MQERTNEQWLAELRGPNPDEALADLYELLVRGLRAALGGRADGV
                     DANIGDFAQDALIKIVSNLDSFRGESRFTTWAKKIAMNVALTELKRRRWRDVSLQDLL
                     DRRTATGRGLADPQLTPEQVAFQNMVLAKLRRTIDEELTDRQREAVVAVILEGMPIAE
                     VARRMGTNQNALYKLLHDARKKLKLRMEAAGLSPQEVLAAFDEG"
     gene            772..999
                     /locus_tag="VE844_17200"
     CDS             772..999
                     /locus_tag="VE844_17200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03022.1"
                     /translation="MLNRSGLNKLVRAVAETRETEIGCDQCFEQMERFAEIEFSGSDA
                     ARAMPLVHDHLRKCEDCHEQYEALLIAMGAG"
BASE COUNT          237 a          271 c          368 g          189 t
ORIGIN      
        1 gttggccgaa cgacggcgca gacgcggtcg agggcgaggt ccgcccgcgt accgactgca
       61 atgacacggt ggatacggaa tcgggatagt atcagactcg tatgcaagaa cgtacaaacg
      121 agcagtggct tgccgagttg cggggaccta acccggacga ggcgcttgca gacctctacg
      181 aactgcttgt gagggggttg agagcggctt tgggcggtcg tgcggacggt gtggacgcca
      241 acattggaga cttcgcccaa gatgcactga taaagatagt gagcaacctg gactccttcc
      301 ggggggagag ccgtttcact acttgggcaa agaagatcgc catgaatgtg gcccttaccg
      361 agctgaagcg caggcgttgg cgcgacgttt cgttgcagga cctgttggac cgacgcacgg
      421 caacgggccg tgggctggcg gatcctcagc taactcccga acaggtagcg ttccagaaca
      481 tggtgctggc caagttgcgg cgcactatag acgaagaact aacggacaga cagcgcgagg
      541 cggtggtagc ggtgatactg gaggggatgc ccatcgccga ggtagcgagg cgcatgggca
      601 ccaatcaaaa cgccctctac aagctactgc acgatgcccg caagaagttg aagctgcgca
      661 tggaggctgc aggcctctct ccacaggagg tgcttgcagc cttcgacgag gggtaagacc
      721 tcaggcgtgt agcgagtcca ggacatcaga agtggaacag gagcttttgc gatgttgaat
      781 cgaagtggcc tcaacaaact ggtgcgagcc gtagctgaga cgcgcgagac cgagatcggt
      841 tgcgaccagt gcttcgagca gatggagcgt ttcgcagaga tagagttctc cggatcggat
      901 gctgcaaggg cgatgccgct ggtccatgat catctgcgta agtgcgagga ctgtcacgag
      961 cagtatgagg ccctgctaat agcgatgggc gcggggtaag ggtgcgagcc ggattggaaa
     1021 ttttagcccc ggccgtagcc cgtcgacccg tgcgggtgcg tccgg
//
LOCUS       DASQSL010001692         1444 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_51510, whole genome shotgun sequence.
ACCESSION   DASQSL010001692 DASQSL010000000
VERSION     DASQSL010001692.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1444
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_51510"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..102
                     /locus_tag="VE844_17205"
     CDS             <1..102
                     /locus_tag="VE844_17205"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_214651.1"
                     /note="this stereospecific enzymes reduces the S isomer of
                     methionine sulfoxide while MsrB reduces the R form;
                     provides protection against oxidative stress; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase"
                     /protein_id="HZC03023.1"
                     /translation="QDYLQRYPDGYTCHFVRPHWRLPIRTDKVAKQA"
     gene            274..804
                     /locus_tag="VE844_17210"
     CDS             274..804
                     /locus_tag="VE844_17210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011524546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P460 family protein"
                     /protein_id="HZC03024.1"
                     /translation="MKRITCLLVAVVALAGVVASMAPASGQAGQEAAPIFVTEMPPGY
                     RDWRLISVAHEAGDLNDIRAILGNDVAINAYREGTLPFPDGTIIARLAWSYDASEENN
                     RVFGRRQSFVAGPPKNGVQFMVKDASKYASTGGWGFGHFDESDGKPANEAVLNTCFPC
                     HQAIKARDLVFTRYAP"
BASE COUNT          314 a          420 c          416 g          294 t
ORIGIN      
        1 caggattatc tccaacgata tcccgacggc tacacctgcc atttcgtccg gccccactgg
       61 agactgccga ttcgcaccga caaggttgca aagcaggcct aacagcagat cgtccagcaa
      121 gaggagatcc gcgcggcatt ccgatcgctg cgctaatcgt ggccggcagc cctgcttcgg
      181 gatggctggt gatgacgcct gttctgaacc ctgagccgtg atggtcagat gacgcatgag
      241 ttcaatcacc gcatatttgg aggaggaacc ctgatgaaac ggatcacgtg cttgctggtt
      301 gccgtggtcg cgctggctgg cgtggtcgcc tccatggccc ccgcatctgg acaggccggt
      361 caagaggccg ccccgatctt cgtcaccgaa atgccccccg gataccgcga ctggcggttg
      421 atctccgtgg cccacgaagc aggcgacctc aacgatatcc gcgccattct gggcaacgat
      481 gtcgcgatca acgcctaccg ggaagggacg ctgccgttcc cggacggcac catcattgcc
      541 cggctcgcct ggagttacga cgcgtcggag gaaaacaaca gagtctttgg ccgtcggcaa
      601 tctttcgtgg ccgggccccc caagaacggg gtgcagttta tggtcaagga cgcaagcaaa
      661 tatgcctcga cgggtggctg ggggttcggt cactttgacg aaagcgacgg caaacccgcc
      721 aacgaggcgg tgctcaacac ctgctttccc tgccaccagg cgatcaaagc tcgcgacctg
      781 gtcttcaccc ggtacgcccc ttaagactga gaaccaccgc agaacggcat ggggcgatga
      841 ccgcacacaa ctcaaccgcc gctgccgtcc tgtcacgccg ggccctgctc ctcacggggg
      901 gcgcgccgaa gacgccttcg atgaggtgtg ttgcaagtta caccgttcac atccgtatag
      961 acggttcgcg gataccgcac gacgtggata gtgagaaata aatctctagc cttttcttgt
     1021 ctttagccag ttagtctctg atacttacca actttgcaca tatgagattt tgattattga
     1081 gacgggatta tcagacaacc gcactggtag gccgctgtaa ggctgaaatt gttgccggca
     1141 ctgtctctaa aaaggctcgg atactctgct gaaaatagcg aggctttttt catacgcggt
     1201 ggtgatcgcc aattcatgag ctactgttgg cgaactcgga agcgccgaga tttcgcctca
     1261 cacattacct ctctgaaggc acagaggctt ggagcaaccc ctgcggaaat ctcggctttg
     1321 ccggtggtga aataggttcg ccaacagtat ccggaggttt tatgagacag aagcaaggga
     1381 agcggtctta gggggagtac gggagcacac ctcatcacag agcggacgct gtaggcggtc
     1441 gact
//
LOCUS       DASQSL010001693         1322 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_67713, whole genome shotgun sequence.
ACCESSION   DASQSL010001693 DASQSL010000000
VERSION     DASQSL010001693.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1322
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67713"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1060
                     /gene="pmbA"
                     /locus_tag="VE844_17215"
     CDS             <1..1060
                     /gene="pmbA"
                     /locus_tag="VE844_17215"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015830748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HZC03025.1"
                     /translation="IARYTGEDECAGLVEAELMARAIPDLDLYHPWGLTPEQTIVMAR
                     ECEGTARAKDPRIRNSEGATVSDHAGVYAYGNSHGFRGAWAGSRSSISCTVIAMEGGN
                     MQRDHWYTLTRNPDHLQLPSQVGEMAAERALRRLGARQLSTRSTAVLFEANVASSLFA
                     HFVSAISGGNLYRKTSFLVDHLGKQVFSDRVTLEEQPHIKQAIGSAPFDNDGVATLPR
                     TLVEKGLLQGYVLSGYSARKLGMRPTGNAGGVHNLIVQPGSADLEGLLAHMDTGLLVT
                     GLMGFGVNLVTGDYSRGASGFWIEHGQIQFPVEEITIAGNLREMFLGIAAIGRDVDER
                     SNIRTGSVLIEQMTVAGQ"
     gene            1117..>1322
                     /locus_tag="VE844_17220"
     CDS             1117..>1322
                     /locus_tag="VE844_17220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008253143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03026.1"
                     /translation="MLSRFNLDTRYDNYCVMGNPINHSLSPQIHAAFAEQTGQMLHYQ
                     AVRVEPGEFAEAVERFYKAGGKGI"
BASE COUNT          307 a          338 c          383 g          294 t
ORIGIN      
        1 cattgcccgg tataccggtg aggacgaatg tgccggcttg gtagaagcgg agcttatggc
       61 ccgcgctatt cctgatctcg acctttacca tccgtggggg cttacgcctg agcagaccat
      121 cgtcatggcg cgagagtgcg agggaacagc acgcgccaaa gatccccgca tccgcaattc
      181 cgagggcgcc acggtgagtg atcatgcagg tgtctacgcc tacggcaata gccatggttt
      241 tagaggcgcc tgggccggca gccgcagcag catctcctgt acggtgatcg ccatggaggg
      301 aggcaacatg caacgcgatc actggtacac gctcacgcgc aatcctgatc atttgcagtt
      361 gcccagtcag gtgggagaaa tggctgctga gcgagcgctg cgtcgcttag gagcacgcca
      421 gctctcaact cggagcacag ccgtcctatt tgaagccaac gtggcgagca gtctgtttgc
      481 tcacttcgtg agtgcgatct cgggcggtaa tctgtaccgt aagacctctt ttctggtgga
      541 tcatctcggc aaacaggtat tttccgatcg ggtaactctc gaggaacaac cgcacatcaa
      601 acaggctatt gggagcgcac cttttgataa cgacggcgtc gctactcttc cacgcaccct
      661 ggtcgagaaa gggctattac aaggctacgt gctctcgggt tactcggcta gaaagctcgg
      721 gatgcggccg acgggtaatg cgggcggtgt ccataatctg atcgtgcagc cgggatcagc
      781 cgatctagag ggtttgctag cccatatgga taccggttta ttggttaccg gacttatggg
      841 gtttggagtg aatttggtga caggagatta ttcacggggc gcatcgggtt tttggatcga
      901 gcatggccag atccaattcc cggtagagga gatcactatc gccggcaatc ttagggagat
      961 gtttttaggc atcgccgcga ttggccggga tgtcgatgag cgtagcaata tccgtacagg
     1021 ctccgtgctc attgagcaga tgaccgtggc ggggcaataa caacatagaa aagttattat
     1081 tatgttaccc gaagatcttt ccccaagcac agagttatgc tctcgagatt taatttagat
     1141 acccgctacg acaactactg tgtaatgggc aaccctatta accatagcct gtcaccgcaa
     1201 atccatgctg cattcgcgga acaaacaggg caaatgcttc attaccaggc agtacgggtc
     1261 gaaccagggg aattcgccga ggcagtcgaa cgattctaca aggcaggcgg taaagggatc
     1321 aa
//
LOCUS       DASQSL010001694         1760 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_26553, whole genome shotgun sequence.
ACCESSION   DASQSL010001694 DASQSL010000000
VERSION     DASQSL010001694.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1760
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26553"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(684..1700)
                     /locus_tag="VE844_17225"
     CDS             complement(684..1700)
                     /locus_tag="VE844_17225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008167925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZC03027.1"
                     /translation="MRLYGGIDLHSNNNVMAIMDERDRVVYQKRLPNDLDTILKRLAP
                     YQSELEGLVVESTYNGYWLVDGLMEAGFTVHLANPAAIKQYEGIKYTDDDSDACLLAH
                     LLRLGVLPKGYIYPKEERPVRDLLRKRAQLVRQKVTQILSIETLMTRNTGQSISANEV
                     KRLTEEQLEYQLPVPELALAVKSNLAVMRCLEERITLLEEAVMARVRLKKEFRSLLSV
                     SGIGPILGLTVMLETGDLRRFATVGDFSSYCRCVESKRLSNGKKKGVGNTKNGNKYLA
                     WAFVEAANFAVRFNPKVRAFYQRKRAKTNGIVAIKAVAHKLARASFYVMRDQVPFDVN
                     KAFA"
BASE COUNT          376 a          553 c          432 g          399 t
ORIGIN      
        1 cattagcttc atgaaagaga actactcaac tgacgtgccg ctcggcgcac atgccgcgga
       61 gtaacgcaca atgcttcgga tgactgaatg cggttgtgat gtatccggcg cggctcagct
      121 cgcggtcacc cattagccgg cccctggtca ataggcaaag tttcatttag cacgattttt
      181 tagatcgtgt tccgaatcac ggtgcccgcc cggataaccc ggtcgatacg catccctgtt
      241 ttcgatcgcg cggtgtcggt cctcaaaagg atccgcacca gtcacccatc aggatcaagg
      301 ccttggtagg atgctcccga aggagaattc tacccgcccc tggcagtctc gactgcccca
      361 gaaaaccgtc ggtgcccgac cgtgtccacc tgtagtgtga tcagcggagt cactttaatg
      421 ggcgccgccc gaagtggtgg acagggaggt ccaccacgcc ggggggccat cctgactaca
      481 ctgtcgatga caggctcgat ggttcggact cccctaagag taccgtccaa cccttctctg
      541 gctcacggcc gaggcgtatc ctcacaaacc ccttatctct tgtagcaccg aattgaagga
      601 tgggacagcc gccaatcaga gtctttggtt ataagccaac cccgttacga gctcgctgtc
      661 ccagccaaac cgcttttact cgttcatgca aaggccttgt tcacgtcaaa aggcacctgg
      721 tcgcgcatca cgtagaaact cgcacgggcc agcttgtggg ccaccgcctt gatggccaca
      781 atgccattcg ttttcgcccg cttgcgctga tagaacgccc ggaccttagg attgaaacgc
      841 acggcaaagt tggccgcctc aacaaaggcc caggccagat atttattccc gttcttcgtg
      901 ttgccgacac ccttcttctt gccgttgctg agccttttgc tctctacaca gcgacagtag
      961 gaggaaaagt cacccacggt ggcgaagcgc cgcaggtccc cggtctcaag catcacggtc
     1021 aaccccaata tcggaccgat gcccgagaca ctgagcagcg atcggaattc cttcttgagt
     1081 cggacccgcg ccatgacggc ttcctccaga agagtgatcc gctcttctaa acaccgcatc
     1141 accgcaagat tgctcttcac cgccagtgca agttcgggca cgggaagctg gtactccagc
     1201 tgctcttcgg ttaagcgctt cacctcattg gcgctgatcg actgccccgt attccgcgtc
     1261 atcagggtct cgatgcttaa gatctgcgtg accttctgcc gcaccaactg agcgcgcttg
     1321 cgtaacaggt cccgcaccgg acgctcctct ttgggataga tatagccttt gggcaagacc
     1381 cccagccgca gcagatgcgc caataagcag gcatccgaat catcatccgt gtatttgatc
     1441 ccttcatact gtttgatcgc cgccgggttt gctaagtgca ccgtaaagcc agcctccatc
     1501 aagccatcca ccaaccagta cccattgtag gtcgactcca ccacgagccc ctcgagctcg
     1561 gactgatacg gagccagtct tttaagaatc gtatccaaat cgttgggcaa gcgcttctga
     1621 taaactactc tatcgcgctc gtccataatc gccatcacgt tgttgtttga atgtagatca
     1681 atcccaccgt atagtctcat cgtcggtctc ctcttttgag cgctaagttt gggtgtcact
     1741 tcactcccaa actgtagccg
//
LOCUS       DASQSL010001695         1245 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_171772, whole genome shotgun sequence.
ACCESSION   DASQSL010001695 DASQSL010000000
VERSION     DASQSL010001695.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1245
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171772"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(157..984)
                     /locus_tag="VE844_17230"
     CDS             complement(157..984)
                     /locus_tag="VE844_17230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018940558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HZC03028.1"
                     /translation="MQIRIGYELIYDCPQPTPMILTLNVHFTRVSDLIVPDYLLADPP
                     VPITAYRDGFGNWCSRIVAPKGQIRLSANAVVKDTGKPDVVATWAGQMPVQNLPEETL
                     VFLLGSRYCETDRLSEVAWGLFGDSPIGWGRVQAICDFVHKHIAFGYEHARSTKTAWE
                     AFNEGTGVCRDFTHLAIAFCRCMNIPARYCTGYLGDMGVPPPHGPMDFAAWFEAYLDG
                     HWYTFDARNNTPRIGRVLIARGRDAADVPISTTFGPNTLKSFRVWTDELSEGLRTSR"
BASE COUNT          264 a          359 c          367 g          255 t
ORIGIN      
        1 cactgcggcc aaacggcggg ggcgacacgg tggtcgtccg cgagccatgg atgccgaaaa
       61 gctgaaatcc gtaatcgcgg cacttgaaag tggaaccagc aaggcggcgg tatgtcgcgc
      121 cttcggcatc ccgcgcagca ataggtctca taacctttat cgtgaagtac gcagtccttc
      181 gctcaattcg tctgtccata ccctaaagct ctttagcgtg ttggggccga aggtggtgct
      241 gatcgggaca tcagccgcgt cgcgaccgcg ggcgatcagc acccggccga tgcgcggcgt
      301 gttgttccga gcgtcaaagg tgtaccaatg accgtcaagg tatgcctcga accaggcggc
      361 gaaatccatc gggccatgtg gtggcggtac gcccatgtcg cccaggtagc cggtacaata
      421 gcgtgcgggg atattcatgc accggcagaa tgcgatggcg aggtgcgtga aatcacggca
      481 gacgccggtc ccctcattga aagcctccca ggccgtcttc gtggagcgcg catgctcgta
      541 accaaaagcg atatgcttat ggacaaagtc gcagatcgct tggacgcgtc cccagccgat
      601 cggtgagtcg ccaaagagcc cccaagccac ctcggatagc cgatcggttt cgcagtatcg
      661 gcttcccaag agaaacacta gggtttcctc gggcaggttt tgcactggca tctgtcccgc
      721 ccaggtggcg accacatccg gcttccccgt gtccttcacg accgcattgg cagagagccg
      781 aatttggccc ttcggcgcta cgatccggct gcaccaattg ccaaagccat cacgataggc
      841 tgtgattggg accggcgggt cggcgaggag gtagtcggga acgatgagat cggagacgcg
      901 cgtgaagtgg acgttcaagg tcaatatcat aggcgtcggc tgcgggcagt cgtaaatcaa
      961 ttcgtagcca atacgaatct gcataatggg tctcccgatg tccgccaata cagctccatg
     1021 catgctctgg cggctttggt ctattttttg gtgcacgcac cctgctcagg ttgtggaacc
     1081 atctcatcac gaagcgttct tagctcccac cacttcgctg catcagaggg tccgagtaga
     1141 gggcactgtt tcataaatgg tttacgccaa gctagacaga aacgagcgtc tgtgcgaatg
     1201 catcgatccc acgcaagtgc atgtcgcgat ccgcttgatc tctcc
//
LOCUS       DASQSL010001696         1518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_79746, whole genome shotgun sequence.
ACCESSION   DASQSL010001696 DASQSL010000000
VERSION     DASQSL010001696.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79746"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(142..>1518)
                     /locus_tag="VE844_17235"
     CDS             complement(142..>1518)
                     /locus_tag="VE844_17235"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HZC03029.1"
                     /translation="QESREDILAILDAFRAEGVGFLMPPPRDQIGDDTIIDISHESLI
                     RQWRHFQQWLREEEADVADLREWQQRAGRNLSSGGGWLDEHDTARAERWKRDIEKRGS
                     PGAWLTRYTRVGAVGSDQVFHYIAESARRVQAARDTRERLESEAKEAQIKQLEAEKKL
                     QHEAAARAQASARASRRVARVAIASTVVVGLVAAFVTWLWWEELTIEHGRAKVLGWLH
                     RYHIEPEMVVVPKGSFQMGDVQGTGGNNEKPVRTVEFKKPFAIGKYEVSFAEYDRYLY
                     AQGIKERNFPGDQGWGRETRPVINVSWDDAVAYAAWLREQTGKPYRLPTEAEWEYAAR
                     GGTDKDYWWDSNAMKPGMANCDGCGSNWDGEQTAPVGSFKPNPHGVYDTAGNVWEWVQ
                     DCYHENYQGAPKDGSAWQDAVGCNLRVVRGGSWGHEPRDVRSAARHRGVPDFRLNLLG
                     FRLAQDLD"
BASE COUNT          280 a          510 c          398 g          330 t
ORIGIN      
        1 gctatgggat cggccacgat aacaggtcat ggcaactctg aacggcctgc gctgtcatgt
       61 ctgccatcgt gcagatctca aacgccaggg ggcatagccc tctggacctc cacaaagggt
      121 aaaagaaaaa agtgcaaggg gttaatccaa gtcctgggcg agacgaaaac caagaaggtt
      181 gagccggaag tctggcacgc ccctgtgccg ggccgccgag cgaacgtccc tcggttcgtg
      241 gccccaggaa ccgccacgga ccacgcgcag gttacagcct acagcatctt gccaagcact
      301 cccatccttt ggtgcacctt ggtagttttc gtggtagcaa tcttgtaccc actcccatac
      361 atttccggcc gtgtcgtaaa ccccgtgagg attcggcttg aaagagccga ccggtgcggt
      421 ctgctccccg tcccagttgc tgccgcagcc atcacagtta gccattccgg gtttcatcgc
      481 gttgctatcc caccagtaat ctttatccgt cccgccgcgc gcggcatact cccactcagc
      541 ctcggtcggt aagcgatagg gtttgccggt ttgctccctc aaccaagccg cgtacgccac
      601 cgcatcgtcc cacgagacat tgatgaccgg cctagtctcg cggccccaac cctggtcgcc
      661 cgggaaattg cgctccttga taccctgcgc gtagagatac cggtcgtatt ccgcaaagct
      721 cacttcgtat ttgccgatcg cgaacggctt cttgaactcc accgtccgca ccggcttttc
      781 attgttacca ccggttccct gaacgtcgcc catctggaag ctacccttag ggactaccac
      841 catttcaggt tctatgtgat acctatgcag ccagccgagc accttggccc ggccgtgttc
      901 gatggtcaac tcctcccacc aaagccatgt cacgaaggcg gcgaccaagc ctacaacgac
      961 ggtactcgcg atagctacgc gcgccacccg ccggctcgcg cgggcggatg cttgtgcacg
     1021 cgccgcggcc tcatgctgga gcttcttttc cgcttcgagt tgtttgatct gtgcttcttt
     1081 ggcttcgctt tccaggcgtt cccgtgtatc tcgcgccgcc tgaacgcgcc gagcactttc
     1141 ggcgatgtag tgaaacactt ggtcactgcc cactgcgccg acgcgtgtat agcgcgtgag
     1201 ccacgcgccc ggactgcccc tcttctcgat gtctcttttc caacgctcgg cgcgcgcggt
     1261 gtcgtgttcg tcgagccagc cgccacccga actaagattc cgtcccgcac gctgttgcca
     1321 ttcgcgcaga tcggccacgt cggcctcttc ctctcggagc cactgctgga aatgccgcca
     1381 ctggcggata aggctttcat gactgatatc gatgatcgtg tcatcaccga tttgatcccg
     1441 cggcggtggc atgagaaagc ccaccccctc cgcgcgaaag gcgtcgagta tagcgagaat
     1501 atcctctcga ctttcctg
//
LOCUS       DASQSL010001697         1618 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_199381, whole genome shotgun sequence.
ACCESSION   DASQSL010001697 DASQSL010000000
VERSION     DASQSL010001697.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199381"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..288)
                     /locus_tag="VE844_17240"
     CDS             complement(<1..288)
                     /locus_tag="VE844_17240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019988769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HZC03030.1"
                     /translation="MGQMIIELEAQYCAHNYAPLPIVLTRGAGCYVWDNAGNRYLDMM
                     SAYSAVSFGHAHPRLLKVLNEQAARLAIISRAFYTDRLGVCRTFTRHVLSSQ"
     gene            complement(269..1246)
                     /locus_tag="VE844_17245"
     CDS             complement(269..1246)
                     /locus_tag="VE844_17245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginase"
                     /protein_id="HZC03031.1"
                     /translation="MVFEFADPIIGRNAKNAGRSLPLATPVIDIIGAASGLGAPDKGC
                     ALGPEVLNQIGLAETLRKHGISIAWQEILRRPVSTRNSADFLVLRDFCTDLFDCVLAS
                     LRGGHQFVVIGGDHSCAIGTWSAASWAIRDQGSLGLIWIDAHMDSHTPATSPSGAAHG
                     MPLACLLGYGAPELTQLVDPKLKPNQVCLIGVRSYEEEEAHLLKQLGVRVIFMEEVQT
                     HGLAWAMQEALEIACKETAGYGLSLDLDAIDPKAAPGVGTPAPEGLQGQELIACMGLL
                     TQKRGFLGLEIAEYNPLHDQDNRTARLVCDLAHASFAEVRENTYGTNDY"
BASE COUNT          366 a          435 c          450 g          367 t
ORIGIN      
        1 ctgggaggaa agcacgtgcc gtgtgaaagt ccgacagact cctaggcgat cggtgtagaa
       61 tgctcgggag atgatggcaa gtctcgctgc ttgttcgttt aagaccttga gcaggcgcgg
      121 atgcgcatga ccgaagctca ctgccgaata ggcgctcatc atatcgaggt aacggttacc
      181 cgcgttatcc cacacatagc aacccgctcc ccgtgtgagt acgatcggga gcggggcgta
      241 gttatgggcg caatactgcg cttcgagctc aataatcatt tgtcccatag gtattctctc
      301 gcacttcggc aaaactggca tgcgccagat cacagacgag gcgggcggtg cggttatctt
      361 gatcgtgcaa aggattgtat tcagcgatct caaggcccag aaaacccctc ttctgtgtta
      421 agagtcccat gcaggcgatg agttcctgtc cctggagacc ttctggtgcg ggtgtgccga
      481 cgccaggcgc tgctttcggg tcgatggcat cgagatcgag gctcaggcca taacctgccg
      541 tctccttgca agcgatctca agcgcctcct gcatcgccca tgcaaggcca tgggtctgca
      601 cttcctccat aaagatcacc cgtaccccga gctgcttgag caggtgcgcc tcttcttcct
      661 catagctccg caccccaata aggcatacct ggttgggttt aagctttgga tcgaccagtt
      721 gggtgagctc aggggcgcca taaccgagca ggcaggcaag cggcatcccg tgcgcggctc
      781 cactgggact ggttgccggc gtatggctgt ccatgtgcgc gtcgatccag atgagaccca
      841 aggagccttg atcacgaata gcccaggagg cagcgctcca ggtgcctatt gcacaggaat
      901 ggtcacctcc tataacgaca aactgatgac cccctcgtaa gctcgccaat acgcagtcaa
      961 agagatcggt acagaaatct ctcaagacga gaaaatcggc cgaatttcgg gtggaaaccg
     1021 gccggcgtag gatctcttgc caggcgattg aaataccgtg tttgcgaagt gtctcggcca
     1081 ggccgatctg gtttaaaacc tcgggtccca aggcgcaacc tttatccggt gctccgagtc
     1141 ccgaagctgc accgatgata tcaatcaccg gggttgcgag cggtaaggat cggcctgcgt
     1201 ttttggcatt ccttccaatt atcggatcag caaactcaaa taccatggga gggtgctctt
     1261 ctactgagga ttatgtccat tacgccttct tagacaacgt gtcccggtgt tttactctgg
     1321 acagtaagcg tacttgaaaa gaccaaattg accttcaagc acgggtgcaa ttaccttacc
     1381 aatgccacat ttcaggaaag acagttttaa ttgcacactt caagcacttg tcgcactcat
     1441 cttttctagg tagagtttgt taagtctacg atttttagtg aaggaaaagg ttatgtcgcg
     1501 agtctgccag ggttgatctg cacactggag caggcggact ggagcgaact gctcaagacc
     1561 ggctggcgtg tgccggagcc gttcagtgca aagggccggg acggggtgac agatatcc
//
LOCUS       DASQSL010001698         2699 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_199393, whole genome shotgun sequence.
ACCESSION   DASQSL010001698 DASQSL010000000
VERSION     DASQSL010001698.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2699
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199393"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1090)
                     /locus_tag="VE844_17250"
     CDS             complement(<1..1090)
                     /locus_tag="VE844_17250"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010960629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HZC03032.1"
                     /translation="MLDLLWLIPALPLAGFLILALSPLPKPGVTAIGVGSVGLSALLA
                     AGVAFAFLTSPPAGHVFTQTLWTWMGVAGFTPKIELYLDALSLVMMLVITGVGFLIHL
                     YASEYMEEDEGYRRFFVYMNLFVAAMLVLVLAGDLLFLYLGWEGVGLCSYLLIGFWYR
                     DPANGRAARKAFVVTRVGDVAMAIGLFLLFTHLGTLDIQALMARARENWPIGSGLAIA
                     AAALLLGGAVGKSAQLPLQTWLPDAMAGPTPVSALIHAATMVTAGMYLIARTHVLYSL
                     APTVQTAVAVIGVMTLLLAGFSALVQTDIKRILAYSTISQIAYMFLALGVGAWTAAIF
                     HFMTHAFFKALLFLSAGAVILSLHEEHDI"
     gene            complement(1093..1401)
                     /gene="nuoK"
                     /locus_tag="VE844_17255"
     CDS             complement(1093..1401)
                     /gene="nuoK"
                     /locus_tag="VE844_17255"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003289597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HZC03033.1"
                     /translation="MAAVPMEHGLLLAAILFVLGLIGVLVRRNIIFILMCLEIMLNAT
                     GLAFVVAGSRWAQADGQIMFILILTLAAAEVSIGLALILQIYHRFRTLDADAVSEMRG
                     "
     gene            complement(1406..1939)
                     /gene="nuoJ"
                     /locus_tag="VE844_17260"
     CDS             complement(1406..1939)
                     /gene="nuoJ"
                     /locus_tag="VE844_17260"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003108740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HZC03034.1"
                     /translation="MQFTFYLAAAVAVVATLMVITRLNAVHALLYLIVSLLAVALIFY
                     ILGAPFAAALEVVIYAGAIMVLFVFVVMMLNLGEAAIEQERRWLSPGLWIGPAVLSLI
                     LLIELLYMLVAGEGGRKLAAGVVDSKEVGSVLYGPYLLAVELASMLLLAGLVGAYHLG
                     RREWGARGEGVRSEEEG"
     gene            complement(2138..2233)
                     /locus_tag="VE844_17265"
     CDS             complement(2138..2233)
                     /locus_tag="VE844_17265"
                     /inference="COORDINATES: protein motif:HMM:NF018933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HZC03035.1"
                     /translation="MCSACGQKNESWNLSERGWMCVECNAYHDRA"
     gene            2518..>2699
                     /locus_tag="VE844_17270"
     CDS             2518..>2699
                     /locus_tag="VE844_17270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03036.1"
                     /translation="MKTPLSQIVLILQVLNEGLGVNAVCRLFRVSKNSLYRWQERLSD
                     LKPTLLLYALCHQFLN"
BASE COUNT          649 a          823 c          738 g          489 t
ORIGIN      
        1 agatatcgtg ctcctcgtgg aggctcagga tcactgcacc ggcggagagg aacaggaggg
       61 ccttgaagaa ggcgtgggtc atgaaatgga agatggcagc tgtccaggcc cccacaccca
      121 gggccaggaa catgtaggcg atctggctga tagtggaata ggccaggatg cgcttgatat
      181 cagtctgcac cagcgcactg aaaccggcca gtagcagggt cataacaccg atcaccgcca
      241 ccgccgtctg cacggtgggc gccaggctat agagcacatg ggtgcgggcg atcaggtaca
      301 tccccgccgt caccatggtg gcggcatgga tgagcgcgct caccggggtg gggccagcca
      361 tagcgtcagg gagccacgtc tggagcggca attgcgctga cttgccgact gcacccccca
      421 gtaacaaagc cgccgcggcg atggccagtc ccgagccgat tggccagttt tctctggccc
      481 gcgccatgag cgcctggatg tccagggtgc cgaggtgggt gaacagcagg aacagaccga
      541 tggccatggc tacatcaccg acccgggtca cgacaaacgc cttgcgggca gcgcgcccat
      601 tggccggatc gcggtaccag aagccgatga gaagatagct gcatagaccc actccttccc
      661 agccgaggta cagaaacagc aggtcgccgg ccagcaccag aaccagcatg gcggcgacga
      721 acaggttcat gtagacgaag aagcgccgat aaccctcgtc ttcctccata tactcggagg
      781 catagagatg aatgagaaag cccaccccgg tgatcaccag catcatcacc agggacaggg
      841 cgtccagata gagctcgatc ttaggcgtaa agccggccac gcccatccag gtccagaggg
      901 tctgggtaaa gacatggcct gcgggcggtg aggtcagaaa ggcgaacgcc acccctgcag
      961 ccagcagggc agacagaccc accgagccga caccaatcgc agtcacgcct ggcttaggca
     1021 aggggcttag cgccaggatc aggaaaccag ccagggggag agcggggatc agccagagga
     1081 gatcgagcac ctttatcctc gcatctcgct caccgcatcc gcgtccaggg tcctaaaccg
     1141 atgatagatt tgcaggatca gagcgagccc gatcgatacc tcggccgctg ccagggtcaa
     1201 tatcagaata aacatgatct gaccgtcagc ttgagcccag cgcgaaccgg ccaccacaaa
     1261 ggctagcccc gtcgcgttca gcatgatctc caaacacatc aggataaaga tgatattgcg
     1321 gcgcacgagc acgccgatca gccccaaaac gaagaggatc gctgcgagca ggagcccgtg
     1381 ttccatcggt acggccgcca taagcctacc cctcctcctc gctcctcact ccctccccac
     1441 gtgcacccca ctcacgccgg cctaggtggt aggctcccac caggccagct aaaagcagca
     1501 tggaagcgag ctcaacggcc agcagataag ggccgtacag gacgctgccc acctccttcg
     1561 agtccacgac accggccgcg agctttcggc caccctcccc tgccaccagc atatagagca
     1621 gctcgattag caagatcagc gacagtaccg ccggtccgat ccatagccct gggctcagcc
     1681 agcggcgctc ctgctcgatg gccgcctcgc ccagattgag catcatgact acgaacacga
     1741 acagcaccat gatggcaccg gcgtagatga ccacctccag ggccgcggcg aacggggcgc
     1801 ccaggatata aaagatcaac gcgacggcta gcagcgacac gatcaggtac agcagcgcat
     1861 gcaccgcatt cagacgggtg atcaccatga gcgtggcgac aacggcgacg gcggctgcca
     1921 gatagaaggt gaattgcatg attttaaccc ttgttcttat ctgctacctt tcttgtagaa
     1981 aaatgtagaa agttcctgct tcactactcc cactactctt atttgagaac cgaagctctc
     2041 aaacaggggt cgcaagctcc acaggcgtta cgccgaggta gccactcccg gcgagaagac
     2101 agacgcaagc cctccaattc aatattccgc gccgcattca agctctgtcg tgataggcat
     2161 tgcattccac acacatccat ccacgctctg agagattcca ggactcattc ttctgaccac
     2221 aagcggaaca caattttggg cactggttcc gtttaattcc aatgagtcca ttgaactcat
     2281 ttggcttgtt ttttgggggt gagcagccta gcctacttta cttttaaagt aggcaaatct
     2341 ttttaaggag gatcgatgcc actcaccccg actccactgt actgttccaa gtgtgattgt
     2401 caacagctaa agacccggaa gagttacacg ctcaaaggag gcgctgttcg tcaactctat
     2461 aggtgccctg aatgtcagca ctgtttttcg gagacccatg acaccccttt agccaacttg
     2521 aagacacccc tttctcagat cgtgctaatt ttgcaggtgc tcaatgaggg gctgggggtc
     2581 aacgcggttt gccgtctgtt ccgcgtgagc aaaaacagcc tctatcgctg gcaagaacgc
     2641 ttgagtgatc tgaaacccac gctgttgttg tatgccttat gtcatcagtt tctcaactt
//
LOCUS       DASQSL010001699         1037 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_149037, whole genome shotgun sequence.
ACCESSION   DASQSL010001699 DASQSL010000000
VERSION     DASQSL010001699.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149037"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            8..937
                     /locus_tag="VE844_17275"
     CDS             8..937
                     /locus_tag="VE844_17275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011239007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC03037.1"
                     /translation="MSGSTRASPTSEASNANGRTSMTISFRPRRHWQVVYRFAHKRPL
                     GAIGAAIIILMALAALLAEIVAPFDPLQNNYGAMLHAPNAPHWLGTDSFGRDVLSRLL
                     YGSRTALWVGFSSSFFATTAGAVLGVTCAYFGGKVDLFMQRLLDILISFPLIVLALVV
                     VALLGSGIWNVIVAIAIPMIPRAALVVRSSSLALRQMLFVEAALTLGAGHARVILRHM
                     LPNVMAPYLIMLTAFLGQAILLEASLSFLGLGVAEPTAAWGLMLRGAAVDFAERAPWM
                     ALFPGLAISLAVFAFNVFGDSLRDALDPKLRVP"
BASE COUNT          160 a          293 c          287 g          297 t
ORIGIN      
        1 ttgctctatg tctggctcga cccgcgcatc acctaccagt gaagcatcaa acgctaacgg
       61 caggacgtct atgacaattt ccttccgacc gcgacgacac tggcaagtcg tgtatcgttt
      121 tgctcacaag cggcctctcg gtgccatcgg cgcggcgatt attattctca tggctttggc
      181 ggccctgctg gcggagatcg tcgctccttt tgatcctttg caaaacaatt atggcgccat
      241 gcttcatgct ccaaacgcgc ctcactggct gggaaccgat tctttcgggc gcgacgtgct
      301 gtcgcggcta ctctatgggt cccgcacggc gctctgggta ggattttcgt cttcattttt
      361 tgccacgact gcaggcgcgg ttctcggtgt gacgtgcgca tacttcggcg gcaaagtaga
      421 tctttttatg caacggttgc tcgacatcct catatcgttt ccgctgattg tcctggccct
      481 cgttgtcgta gcgctgcttg gctcgggaat ctggaacgtc attgtggcta ttgccattcc
      541 gatgattccc cgtgccgctc tggtggtgcg gagcagttcc ctggcattgc ggcagatgct
      601 ctttgtcgag gcggcgctta ccttaggtgc gggtcacgcc cgcgtcatac ttcgccacat
      661 gctgcccaat gtcatggcac cttatctaat catgctgacc gcttttctcg gtcaggcgat
      721 acttctggaa gcatcgcttt cgttcctcgg tttgggggtg gcggagccga ccgctgcctg
      781 gggactgatg cttcgcggag ctgcggtgga ttttgccgag cgcgcgccat ggatggcgct
      841 gtttccggga ttggcgatca gtctagctgt gttcgctttc aacgttttcg gagattcact
      901 gcgtgacgct ctcgatccaa agttgcgcgt cccgtaagtt cgagcgctca gtaaacttct
      961 tccaccgcga cccatttgcc attctgatgt tcgatgattg ttgaagattg ctttttcggc
     1021 tttacgatcg tttttgc
//
LOCUS       DASQSL010001700         1224 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_67832, whole genome shotgun sequence.
ACCESSION   DASQSL010001700 DASQSL010000000
VERSION     DASQSL010001700.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67832"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..959)
                     /locus_tag="VE844_17280"
     CDS             complement(<1..959)
                     /locus_tag="VE844_17280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013377962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03038.1"
                     /translation="MALNLLKDKGVPLEKQRFTWKELVQPPYSKLDDDAFTRVRVILM
                     NGIESEAVRFGHACARMNSDLQLALARVRRVEQHQQTLVNWLNPADQSPLETTIGFEQ
                     VAIEVTASVAEREPDPYLAQVYRFGLLEDFDHMYRYAALMDRVEGKDANTLVQSYSDI
                     LPGRPTSIEHRDPSDDLRRPYNRTQAEFITKLHALTIMAGEHQTHDYYMNIGPTFADP
                     IARQLYAEIASIEEQHVTQYESIIDTRETWLEKWLLHEATEVYNYFSCVEYEGNPRIK
                     RIWERFLEYELGHLRFVADLFENTEKRDAAQVLSESLSQPIRY"
BASE COUNT          241 a          360 c          356 g          267 t
ORIGIN      
        1 tcgtaacgga tgggctggga gagggactca gataatacct gggccgcgtc gcgtttctcc
       61 gtattttcga acaaatccgc cacgaagcgg aggtgaccca gctcgtactc gaggaagcgc
      121 tcccaaatcc tcttgatacg aggattgcct tcatactcca cgcagctgaa atagttatac
      181 acctcggtgg cctcgtgcag cagccacttc tcgagccatg tctccctcgt atcgatgatc
      241 gactcgtact gtgtgacatg ctgctcctcg atcgaggcga tctccgcata gagctgccgg
      301 gcgatggggt ccgcgaacgt cgggccgatg ttcatgtagt aatcatgggt ctggtgctcc
      361 ccggccatga tcgtcagggc atggagcttc gtaatgaatt cggcctgagt gcgattgtac
      421 ggccggcgca ggtcatcgct cgggtctcgg tgctcgatcg aggtcgggcg ccccgggagg
      481 atatccgaat agctctgcac gagggtattg gcgtctttgc cttcgacccg atccatcagc
      541 gccgcatacc gatacatgtg gtcgaagtcc tcaagcaacc cgaagcgata cacctgggcc
      601 aggtaggggt ccggctccct ttcggccaca ctggcggtca cctcaatcgc cacctgttcg
      661 aacccgatgg tcgtttcgag gggggactgg tcggccgggt tcagccagtt gaccagtgtc
      721 tgctggtgct gctcgacacg acgcacccgc gccagcgcga gctgcaggtc gctgttcatg
      781 cgcgcacagg cgtggccgaa ccgcaccgcc tccgactcga tcccgttcat caaaatcacg
      841 cgcacccgcg tgaaggcgtc gtcatcgagc ttgctatagg gcggctggac caactccttc
      901 caggtaaaac gttgtttttc aagcggtacg cctttgtctt tcagtaagtt cagtgccata
      961 gaacttcctc cactgaaacc atcaaatttc acaggtttta ggccgtagta ttaggccccg
     1021 aatctgtcat gccggcgagg gggcatcgga cacttgaggg gtgtcggatg acaactgcca
     1081 tcaaggcgac tttaaaaagg tggtcgcgat gcggcacggc gggggaacac gtcaactaac
     1141 atgagcgatc ttctctagcg cgggcactgg ctgcactaac actctgcagg tgcgatatcc
     1201 ctactcctgc tccgtaggga tcag
//
LOCUS       DASQSL010001701         1515 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_117408, whole genome shotgun sequence.
ACCESSION   DASQSL010001701 DASQSL010000000
VERSION     DASQSL010001701.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117408"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..764
                     /locus_tag="VE844_17285"
     CDS             <1..764
                     /locus_tag="VE844_17285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03039.1"
                     /translation="ELRIEELHMENLGTRDFSVRLDGILSPVTLADFSRALVWPLLAG
                     RISGIIPGLYYQNNRLRIGGTLLVQAFDGKIVVHNLRIDELFGPAPRLAADILLKDLE
                     LAALTHTFAFGKIEGRLSGSINRLHLEDWQPVYFEAELATPEHDQSRHRISQRAVANL
                     TDLGGGMTTSMISRLILQLFDEFSYDRLGIKCRLYRGVCEMGGLEPVDGGYAIVKPGL
                     LPPWLEVKGYNRAVDWEVLIARLRALRHSEGARIK"
     gene            761..1384
                     /locus_tag="VE844_17290"
     CDS             761..1384
                     /locus_tag="VE844_17290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018716993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbL family protein"
                     /protein_id="HZC03040.1"
                     /translation="MNVDLITTRRQGYLFIYLCLGLAACVTVNVYFPAAAAERAADTI
                     IEDIYGEGSGAEQDPEKPADDRGSRRFEDDREALSKLIEMLLPAAQAQPDITIATPRI
                     AKLKAAMKRRHAALLPFYQSGAVGMTRDGLVAIRDLSVVPPPDRNTVKQLVAKENRDR
                     NALYPEIARTNGHPEWEREIRTIFAQRWIANAPAGWWYQGPGGWQQK"
BASE COUNT          308 a          424 c          471 g          312 t
ORIGIN      
        1 gagaactgcg gatcgaggag ttacacatgg aaaacctggg cactcgggat ttctccgtgc
       61 ggctcgatgg gatacttagc ccggtgacat tggccgattt cagccgtgcc ttggtgtggc
      121 ccctccttgc aggccggatc tccggcatta tccctgggct ttattaccaa aataaccgct
      181 tacggatcgg gggcaccctc ttggttcagg cctttgacgg caagatcgtt gttcacaatc
      241 tccgcatcga cgaactattc ggcccggctc caaggctcgc ggcggatatc ctgctcaagg
      301 atctggagct ggccgcactg acccatacct ttgcctttgg taagattgag ggccgactga
      361 gcggaagcat caaccgcctg catctcgaag actggcagcc ggtctatttc gaggcagagt
      421 tggcgacacc agagcacgat cagtcgcgcc atcggatcag ccagagggcc gtggctaatc
      481 ttacggatct gggcggcggc atgaccacca gcatgatctc gcgcctcatc ctgcagctat
      541 tcgatgagtt ctcctacgat cggctcggga tcaagtgtcg cctttatcgc ggggtttgcg
      601 agatgggtgg tcttgagcct gtcgatggcg gttatgctat agtcaagccc ggccttttgc
      661 cgccatggct cgaggtcaaa gggtacaatc gcgcggtcga ttgggaggtg ctgatcgcgc
      721 gcttgagagc gctcagacac agtgagggag caaggataaa atgaatgtgg atcttataac
      781 gactcgccgg caaggctatc tgttcatcta tctttgcctg gggcttgccg cctgtgtcac
      841 ggtcaacgtg tactttccgg cagccgcagc cgagagggcg gccgatacga tcattgagga
      901 tatttatggg gagggatcgg gtgctgaaca ggacccggaa aagccggcgg atgaccgcgg
      961 ctccaggcgc ttcgaggatg acagggaggc cctaagcaag ctgatcgaga tgctgctgcc
     1021 ggccgctcag gcacagcccg atatcaccat cgccacccct agaatagcta agctcaaggc
     1081 cgccatgaag cgccggcacg cggccctttt gcccttttat caaagcggtg ccgtaggcat
     1141 gacccgcgat ggcttagtgg ctatccgcga tctgtcggtc gtgccaccgc ccgatcgaaa
     1201 caccgtgaaa caactggttg ccaaggagaa ccgcgaccgc aacgcgcttt atcctgagat
     1261 tgcccggacc aatggccatc ctgaatggga gcgcgagatc cgtacgatct tcgcccaacg
     1321 ctggatcgcc aatgctccgg cggggtggtg gtatcagggc ccaggcggct ggcaacaaaa
     1381 atagcggatc ggaaaaaaag ttcatgagga tcgggggggc agctctctca tgcgccggtg
     1441 ccaccggatg atagtgctgg gttggctcgt gatcggtggg gtcgtcgccc cggcaacggc
     1501 gggaaacctg cttga
//
LOCUS       DASQSL010001702         1424 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_26657, whole genome shotgun sequence.
ACCESSION   DASQSL010001702 DASQSL010000000
VERSION     DASQSL010001702.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1424)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1424)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1424
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26657"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            214..>1424
                     /locus_tag="VE844_17295"
     CDS             214..>1424
                     /locus_tag="VE844_17295"
                     /inference="COORDINATES: protein motif:HMM:NF033592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC03041.1"
                     /translation="MFVPFVGVVQQYLQSWSLGPVLQCLERFLEEPACRTTLIKKPNA
                     FTRPQGLYSLPVTLKTFFTQCLAQDHSCRTAVATAKAHSWLPPSASPDTAAYCRARDA
                     LAAEGLQKAVEHTAQALDAGVSDAHLWLGRQVQVVDGTGIALPDTEANQDDYPQPSQQ
                     KPGCGFPVLRLVAFMSLATGAVSRYRIGNLHDHEQRLFQALRPHLKRGEVVLGDRNFG
                     TFATLVLLKRQGADGVFRRHQARGAGVQSLKRLGQDDHLVCGSFIPRKQHPVWLDASV
                     ALPSAFVVREVSFHVTQPGFRTQSVTLVTTLLDAESYPAEALAELYLKRWRMELWLRD
                     IKITMDMDMLRTKTPARVRAEWAMFLVGYHLIRTVMFDASQVSEVRLEQLSFQSALMR
                     FGLWCAGLRCSL"
BASE COUNT          267 a          453 c          386 g          318 t
ORIGIN      
        1 tggtttagcc ccctgaatat ccagttccgc caatcttact gtcaatctag ggtatacccg
       61 aatggcactg acgtagcctc aattagtttg tattcaatat attagagtag gaacgacact
      121 ctcggtttgt ggggcttgac ccctgatcgc aaaccacctc caatgtgcaa ggtccaaggt
      181 gttcaactac ccttttcaca tcagaggtgt ctcatgttcg ttcctttcgt cggtgtcgtc
      241 cagcagtacc tccaatcctg gtccctggga cccgtcctcc agtgcctcga gcgattccta
      301 gaggagcctg catgtcgcac aactctgatc aagaagccca acgcctttac ccggccccaa
      361 ggcctctatt cgctacccgt taccctcaag accttcttca cccagtgcct cgctcaggat
      421 cactcgtgtc gcaccgcggt ggccaccgcc aaagcccaca gttggctgcc accgagcgcc
      481 tcacccgata ccgccgctta ttgtcgagcc cgtgacgcgc tggccgccga agggctccag
      541 aaagccgtcg agcacaccgc tcaagccctc gacgccggtg tctcagatgc acacctgtgg
      601 ctaggtcgac aggtccaagt cgtcgatggc accggcattg cgctgcctga taccgaggcc
      661 aatcaagacg attatcctca gccctcacag caaaagcccg gctgcggctt tcccgtcctg
      721 cgactggtcg ccttcatgtc cctggccacc ggtgcggtga gccgctatcg catcggcaac
      781 ctccatgatc atgaacaacg cctcttccaa gcgcttcgcc cgcacctcaa gcggggcgag
      841 gtcgtactcg gcgaccgtaa cttcggtacc tttgccactc tggtgttgct caagcgtcaa
      901 ggcgccgatg gggtctttcg tcgccatcag gcgcgcggcg ctggggtgca atccctcaag
      961 cgtctgggcc aagacgatca cctggtgtgc gggtccttca tcccgagaaa acaacacccc
     1021 gtatggctcg atgcctcggt ggcgttgccc tcagcgttcg tggttcgtga agtcagcttt
     1081 cacgtgactc agcccggttt ccgcacccaa tcggtgacgc tcgtgaccac gctgttggat
     1141 gccgagagct atcccgctga ggcactcgct gagctttact taaaaaggtg gcggatggaa
     1201 ctatggctgc gggacatcaa gatcaccatg gacatggaca tgctgcggac caagacgcct
     1261 gcccgtgtgc gggcagagtg ggccatgttt ctagtgggtt accatctgat tcggaccgtc
     1321 atgttcgatg cctcccaggt gagcgaggtg cggcttgagc aattgagttt tcaatcggcg
     1381 ctgatgcgct tcgggctgtg gtgtgcgggg ctcaggtgta gcct
//
LOCUS       DASQSL010001703         1996 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_36435, whole genome shotgun sequence.
ACCESSION   DASQSL010001703 DASQSL010000000
VERSION     DASQSL010001703.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1996
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36435"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            327..1865
                     /locus_tag="VE844_17300"
     CDS             327..1865
                     /locus_tag="VE844_17300"
                     /inference="COORDINATES: protein motif:HMM:NF033572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISKra4 family transposase"
                     /protein_id="HZC03042.1"
                     /translation="MEKMEQTSADCNPERLDQTLNDLKSYVKRAAEQGLAAHEVEADI
                     WRRVLRLGHQALALLFQLVGSGDVGESTALPDGHEVRRLEGLRSRTYQSVFGRFEVER
                     TVYGSREGQKIEYVPVDTQLQLPESEFSYLLQDWGQGLAVEQAYRRVPETLGRILEVK
                     PPVDSLERMNQKMSQSVRGFRESRPAPEPESEGALCVVSADGKGIPIRRPSAEVPIEA
                     HDRNPKPKTNRKKMAVVGAVYTIDPFVRTPEEVAASLFRDPNEAAPYAERPEPQYKRL
                     WASLPQDQDGELISATDETFGWRAQEVARRNPDSHKPTLLLMDGQKSLWEAGQRDLPP
                     DDRIEILDLLHATPRIWEAAGLFYDRDSDPAWEFVYDRVLRILRGEVRSVIAGLRQMG
                     TKRKLRGKKREKLAKICGYLQNNAHRMHYDEYLAAGYPIASGIIEGACRHVVKDRMER
                     SGMRWTLESAQAMLDVRSTYINGDWDAFMAYRIDKETQRLYPHRALVEPIDIPEKSEM
                     LIAA"
BASE COUNT          424 a          554 c          631 g          387 t
ORIGIN      
        1 ggcgtgcgga tgcggtttaa ccctgaggcg ttgaggatgt ccaggacctc ctcagggctt
       61 ggcgcgggat tgatcggttc caccgaggtg ggaatcccca cggtgagaat gccgcgtgcg
      121 tgcagggcgt ggcgcaactc ggcgtcattc atccccaggt ccccaccgag cgaggggtgt
      181 gaccggccgc ccgcatcaag ctgacagatg aacaaaactc tttcaacggc aaggcattag
      241 ctcactaaag gctggaaaaa tcggctcccg aatgtcaaag tggggtttca actctaaaat
      301 tccctccaac atacaggagc cgcgtcatgg agaagatgga gcaaacgagt gccgattgca
      361 accctgagcg tctggatcag accttgaacg acctcaagag ctatgtcaaa agggcggccg
      421 agcagggcct cgctgcccat gaggtcgaag ccgatatttg gcgtcgggtt ttgcgactgg
      481 gtcatcaagc cctcgccctc ttgtttcagc tggtcggctc cggtgacgtg ggggagagca
      541 ccgcgttgcc ggatggccat gaggtgcgtc gcctcgaagg gctacgttca cggacgtacc
      601 agtcggtctt tgggcgcttc gaagtcgagc gcaccgtcta tgggagtcgc gaagggcaaa
      661 agattgagta tgtccccgtc gacacccagt tacagctgcc cgaaagtgag ttttcctatc
      721 tgctccagga ctggggccaa ggcttggcgg tggagcaggc ttatcgtcgc gtgcccgaga
      781 cgctggggcg catcctggag gtgaagccgc cagtcgatag tctggagcgc atgaaccaga
      841 agatgtcaca gagcgtgcgt ggctttcgtg aatcacgacc ggctccggag cccgagtccg
      901 aaggcgcctt gtgtgtggtg agtgcggacg gcaagggtat tcccattcga cgtccgagcg
      961 ccgaggtgcc gattgaggct catgaccgaa acccgaagcc caaaacgaac cgcaagaaaa
     1021 tggccgtcgt cggtgcggtg tacaccattg atccctttgt gcgcacgcct gaggaggtgg
     1081 ccgcctcgct gtttcgcgat ccgaatgagg cggcgccgta cgcagagcgg cctgagcccc
     1141 agtataagcg cctgtgggcg agtctgcctc aggaccaaga cggcgaactc atctcggcca
     1201 ccgatgagac ctttgggtgg cgggcccagg aagtggctcg gcgcaatccc gactcccaca
     1261 agcccacgct cttgctcatg gatggacaga aatcactttg ggaggcgggc caacgcgatt
     1321 tgcctccgga cgataggatc gaaattctcg atctgttgca tgccacccct cggatatggg
     1381 aggctgccgg tctgttctat gatcgcgatt cggatcccgc ctgggagttt gtctacgatc
     1441 gggtgctgcg gattttgcga ggcgaggtgc gctcggtgat tgccgggctc aggcagatgg
     1501 ggaccaagcg caagctcaga ggcaaaaagc gtgagaaact ggccaaaatc tgtggctact
     1561 tgcaaaataa tgcgcatcgg atgcactacg atgagtatct agcggcgggc tatccgatcg
     1621 cctccgggat cattgaaggg gcatgccgtc acgtggtcaa ggaccgtatg gagcgctcag
     1681 gaatgcgctg gactctcgag agtgctcagg ccatgttgga tgtgcgtagc acctacatca
     1741 atggagattg ggacgccttc atggcctatc gcatcgacaa ggaaacccaa cggttatatc
     1801 cgcatcgagc acttgtcgaa ccaattgaca taccagagaa aagcgagatg ctaatagcgg
     1861 cttgagagtt ctgagggtga ccggtcacac cctaccaact ttggcgatga tacgtacctg
     1921 ctgccccaag tattcccgga aggcgccccg acccaccccg cctatggggc tggccatgca
     1981 accgtggccg gcgcat
//
LOCUS       DASQSL010001704         2100 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_192034, whole genome shotgun sequence.
ACCESSION   DASQSL010001704 DASQSL010000000
VERSION     DASQSL010001704.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2100
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192034"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            893..1477
                     /locus_tag="VE844_17305"
     CDS             893..1477
                     /locus_tag="VE844_17305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015451773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_function: GO:0015252 - proton channel activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM175 family protein"
                     /protein_id="HZC03043.1"
                     /translation="MGKNRLEAFSDGVLAIIITIMVLEIKVPHGEGLATLVPLIPVFL
                     SYVLSFVYLGIYWNNHHHMLHATQTVTGPMLWANLHLLFWLSLIPFATGWMGENHFTA
                     APSALYGVVLLMAAVAYWILQQLIIASQGPDSMLKKAIGGDWKGKLSPVLYAAAIPLA
                     FWWHWISLGLYVVVAVLWLIPDRRIENVLRNADT"
     gene            1786..>2100
                     /locus_tag="VE844_17310"
     CDS             1786..>2100
                     /locus_tag="VE844_17310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZC03044.1"
                     /translation="MPYLKIGRENSDDIEVYYKDWGPKNAQPIMFHHGWPLSADDWDT
                     QMLYFVEQGYRVIAHDRRGHGRSSQVSEGHDMDHYAADAAAVVAHLDLRDAIHIGHST
                     GGG"
BASE COUNT          432 a          608 c          605 g          455 t
ORIGIN      
        1 aatcctggcc gtcggctgcg cgtccaacag gcgttggatg gctgtagcgt acttcgagag
       61 caccaatgac ccgtgacggt gcggacgcac ctcttgcgga gaggtcgcat cagtcccgcg
      121 cgcgtgtacc ccgatgagag gacaaccctc gtcaaaattt tcgttacgta tttggcttgt
      181 taagccgacc ctatcggctc atcgtaactc cgtaacatcg cagacgttgc cttttcacat
      241 agagcgcctc atcctgctgc tgtacggccc tgagggctcg tcaagttaat cccggcgaga
      301 caaggtcgag ttaattatcc accagcgtaa cggaaatttt gacgcggttt ggcatagcct
      361 gcgtcatgcg tcatcgcgtg gtccccccag tccatacact cctggcaacc ggagcatgcg
      421 agctgtattt ctgcgaaggc cttatagtaa agtcctcggc gagactgcat cggagtattc
      481 gttggcgaaa tacagcacat cccgcggctt gaaatgcttt actgagtcgt ccggacgacc
      541 cgagtcgtca ttcgtagcca caggatgcat gcctttggtg tacctcctac ccctgtaaac
      601 cagtctactt ggttgccgag aaatgcatgg ctcaaaaggg actgactaac tataaggatg
      661 tcttggcgag ggctgtacct ccgtggggag ttaagtcaac tcacctgcac cgctccgcgg
      721 gccgtcattt gccacgggcc gtgatgccga aatacttgaa ggataagacc cagatttagg
      781 ctattatgct gaaatttccg tataagcagc cccaacaggg gatgagacct acgttccgca
      841 cagggcaatt agggcgggtg tggaagttcc tttgaccgcg agcacatgct gcatgggaaa
      901 gaatcggctt gaagcgttca gtgatggcgt gctcgccatc atcatcacca ttatggtgtt
      961 ggagatcaag gtgccccacg gcgagggcct cgcgactctg gtgccattga tccccgtctt
     1021 cctgagctac gttctgagct tcgtctacct tgggatctat tggaataacc accaccacat
     1081 gcttcatgcg acgcaaacag tcacggggcc gatgctctgg gcgaatctgc atctcttgtt
     1141 ctggctgtcc ctcatcccgt tcgcaacggg ctggatgggt gagaaccact tcacggctgc
     1201 accatcagcg ctctatggtg tggtgcttct gatggcggcg gtcgcctact ggatattgca
     1261 acaactgatc attgcgtcgc agggtcccga ctccatgctc aaaaaggcga tcggaggcga
     1321 ttggaaaggc aagctgtcgc cggtgctgta cgccgctgcc attcctttgg ccttctggtg
     1381 gcactggatc tccttgggcc tgtatgtcgt cgtggcggtg ctgtggctta taccggatcg
     1441 acggatcgag aacgtactca gaaacgcaga cacataacca ttcgttgcag tggacgcggt
     1501 gacccgcgcc gctgaagcgg tgaccgccct ggcggtgatg ggcatcctcg tatttctctt
     1561 gctgatctga gtgtgtgtca cacacgcgtg ctggtaccat caaccgatag gcgatgggca
     1621 acccggtgcg gtcaaggagg gcgtagtagg cgggaggcag cactctcctc cgtgccctcc
     1681 tctctataca gtctatacag gagtggatgc gccgggagca agacagccaa ggatgaggtt
     1741 tccatcatca agcccatcga ggcgggtaca gaaaggagcc tttccatgcc ttacctcaag
     1801 attggccgag aaaactccga cgacatcgag gtctactaca aggactgggg ccccaagaac
     1861 gcgcagccga tcatgttcca ccatggctgg cccctgagcg ccgacgactg ggacacccag
     1921 atgctctact tcgtggagca gggctaccgc gtcattgcgc atgaccggcg cggccatggc
     1981 cggtcgagcc aggtcagcga ggggcacgac atggaccact acgccgcgga cgccgccgcg
     2041 gtcgtcgcgc atctcgacct gcgcgacgcc atccacatcg gccattcgac cggcggcggc
//
LOCUS       DASQSL010001705         1322 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_26684, whole genome shotgun sequence.
ACCESSION   DASQSL010001705 DASQSL010000000
VERSION     DASQSL010001705.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1322
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26684"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            650..>1322
                     /locus_tag="VE844_17315"
     CDS             650..>1322
                     /locus_tag="VE844_17315"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011430733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HZC03045.1"
                     /translation="MDDVPHLRFPWVNYALILLNALLFYRELTLPPDALDQFIATYAF
                     VPDRLSAALGGGVAEGRDAILTIFTAMFLHEGWLHFLSNMLFLWIFGDNVEDALGHLT
                     YLASYLAFGAAAALAHFFTDPFSPIPALGASGAIAGVLGFYLILYPGARVLSLVPILI
                     LFWFVRVPAAIFLFAWFALQALSGVATIGQQVGGGIAYWAHIGGFVAGVGIGALFRVL
                     SERSPD"
BASE COUNT          255 a          407 c          337 g          323 t
ORIGIN      
        1 gacctcgaac gtcggctcta cgtctccgct ctctacgtcc tcctcggaga agccctggct
       61 aacctgcgcc attgcgggag cggccgctac cagcgccagc gccagcatcg ccgccaacaa
      121 cattaacttt ctcaacttct aacaacctcc tatctagatg attactgtca tgtaatccta
      181 agccaactta cccctaaaat tcaaggttct gtaagacttg ggaaagaaat ttcctcgaac
      241 ccggcaatgt ttaatctaat aatcaccgat gttattgcta tttaacctgg ttgttagctc
      301 atcgaaaatc aactcgttcg atgctcgaac ctgtcgggcg cctcgcctcc cctacgtgtg
      361 ccgaacgaag gggccgaagg ttggaacttt atctacttaa caaactttag ccagcagttc
      421 accctctcct aacacacctg ggggaacatt cttctattat tcggcggagg ggtggcaagg
      481 atgcgctagc attgcatcaa cttcctcaac ttctagctat agcttgccac ccctcttttt
      541 tcggggctta gaggtgttcc ggtctctgcc gctacggagc aagcaggttt agaagcgttc
      601 cgggataaag taagatctat ccccggagaa gcagagattg ataccgctca tggacgatgt
      661 accgcacctg aggttcccct gggtcaacta tgccctgatc ttgctgaacg ccctcctctt
      721 ctaccgcgag ctaaccctac cccctgatgc tttggaccaa ttcatagcca cctacgcctt
      781 cgttccggac aggctttcgg cggcgttggg cggaggtgtg gcagagggaa gagacgccat
      841 ccttaccatc ttcaccgcga tgtttctgca cgagggctgg ctacacttcc tgagcaacat
      901 gctcttcctc tggatcttcg gggacaacgt ggaggatgcc ctcgggcacc ttacttacct
      961 ggccagctac ctggccttcg gggcggcggc cgcgctggct cacttcttta cggatccctt
     1021 tagcccgatc cctgccctag gagccagcgg cgcgatagcg ggagtcctcg ggttctacct
     1081 aatactctat cccggggccc gggttctttc cctggtcccc atactcatcc ttttctggtt
     1141 cgtccgcgtg ccggcggcga tcttcttgtt cgcctggttt gccctccagg cgctcagcgg
     1201 cgtcgcgacc ataggacaac aagtcggggg cgggatagcg tactgggcgc atatcggagg
     1261 attcgtggcc ggggtcggta tcggggcgct cttccgcgtt ctgagcgagc gctcacccga
     1321 cg
//
LOCUS       DASQSL010001706         1116 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_192072, whole genome shotgun sequence.
ACCESSION   DASQSL010001706 DASQSL010000000
VERSION     DASQSL010001706.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192072"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            151..276
                     /locus_tag="VE844_17320"
     CDS             151..276
                     /locus_tag="VE844_17320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03046.1"
                     /translation="MPMLAEGMAVKMRESSAYIDGQEHPRQGKGQMMLMPHQATR"
     gene            374..991
                     /locus_tag="VE844_17325"
     CDS             374..991
                     /locus_tag="VE844_17325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012120381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HZC03047.1"
                     /translation="MATGMRTPALKLVWEADGLEIDLLPLQGLWTEEQYLRLTDQTNR
                     FIEFTEGSVEVLPMPTRKHQAISRFLFLAFLSFVQRLGGTVFYAPLRVRVAPGRFREP
                     DLVLLLDVNDPRNQNAFWLGADLVVEIVSPDDVERDTVIKRTDYAEAGIPEYWIVNPE
                     EATITVLKLDNGVYMTYGVFGRGETATSALLSGFIVSVDAVCDAE"
BASE COUNT          252 a          297 c          334 g          233 t
ORIGIN      
        1 tctttcacag gccgagccaa aaatcatgta cgattatcat taccaaggtg tagaacacca
       61 tctgattttc ctgtacgatg atgccgcaca taggctagca ctcccacaac gaacgcacag
      121 acccacacgt atagtgttga agcttctatt gtgccaatgt tagctgaggg aatggccgtc
      181 aagatgcgcg agagctcggc ctacatcgat ggccaggaac accccaggca gggcaagggc
      241 cagatgatgc tcatgccaca ccaggccacg agatagcgtg tgccggtccc gtgcgacgcc
      301 gagaagggct ccgggcttgc tgcaatatcc ttatggtgag gcggcatgaa tcgtttgacc
      361 ggggggagag aagatggcta caggtatgcg cacgccagcg ctaaaattgg tatgggaggc
      421 agacgggttg gagatcgatc tgttgccact gcaaggcctc tggactgagg agcagtacct
      481 ccgactcacg gaccagacga atcgtttcat tgaattcact gagggttccg tggaggtcct
      541 gccgatgccg acacgcaaac accaggcgat ctcacgcttc ctcttcctcg ccttcttatc
      601 cttcgttcag cgcctcggcg gcacggtatt ttacgcgccg ttacgggtgc gcgtcgcgcc
      661 aggccgcttt cgcgagccag acctggtctt gctcctcgat gtcaacgacc cgcgtaatca
      721 aaacgccttc tggctcggtg cggacctcgt ggtagagatc gtgagccccg acgatgtcga
      781 gcgcgacacg gtgatcaagc gcaccgacta tgccgaagcg ggtatccctg agtactggat
      841 cgtcaacccc gaagaggcaa cgatcacggt gctgaagctc gataatggcg tgtacatgac
      901 ctacggagtc ttcggccgcg gtgagacagc aacatctgca ctgctatcag gctttatcgt
      961 gagtgtcgat gcggtctgtg acgcggagtg aggggataga gctgtggtac gcgatggttg
     1021 ccgcccgtct tagacactgg gtaatgagat cgacatgtga tgaattggag agaaaagtga
     1081 tggaacaggg tatgacacag cggcttcggg agattt
//
LOCUS       DASQSL010001707         1463 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_192081, whole genome shotgun sequence.
ACCESSION   DASQSL010001707 DASQSL010000000
VERSION     DASQSL010001707.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1463)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1463)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1463
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192081"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..312)
                     /locus_tag="VE844_17330"
     CDS             complement(<1..312)
                     /locus_tag="VE844_17330"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03048.1"
                     /translation="MRRVMLIVAAMAMMVSLFAVVAYAAQIEGTDNSETLIETNLNDQ
                     IAGHKGEDTIDAAFYNRNRTPGDLGDTDWVKGNKGNDTLYANDGDNRDTLNGGRGTDE
                     CV"
     gene            769..>1463
                     /locus_tag="VE844_17335"
     CDS             769..>1463
                     /locus_tag="VE844_17335"
                     /inference="COORDINATES: protein motif:HMM:TIGR00350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HZC03049.1"
                     /translation="MRARYRRRRRLAVLVLASLFFGIGTQAAAFFEAEEAGSASTAET
                     AGSSGFVPATFEGLLAQGDSSTIPADEVRTPAHKTTKDLASSRSREPTNGGREQSARK
                     EALGARKEAEQASGEPLDVLVLGVDRRPSSAEGLSTRSDTMMLVRVTPATGEIKLLSV
                     PRDLYVDVEPGENDRINTAYAHGGVDQARAVMEDLTGVDIDNYVIVDFEGFEKVIDAM
                     GGARVDVGTGVFP"
BASE COUNT          306 a          410 c          438 g          309 t
ORIGIN      
        1 aacacattcg tcggtgccac gaccaccatt gagggtgtcc cggttgtccc cgtcattagc
       61 gtatagggtg tcgttgcctt tattcccctt cacccagtcc gtatcgccta ggtcccctgg
      121 ggttcgatta cggttgtaaa aagcggcatc aatagtgtcc tcacccttgt ggccggcgat
      181 ctggtcgttc agattagtct cgatgagggt ttccgagttg tcggtaccct cgatttgggc
      241 cgcataagcc acaacggcga atagcgacac catcatcgcc attgccgcca cgatcagcat
      301 aactctgcgc atgtttcccc ctttagcttg atcgaggagc gaggtagcgc ctgtccccac
      361 ccccagtaaa cgatacatcc acatactaag cgctacgcct taccccctta tctctggcgg
      421 aggagccatt ccccccgctc ttctacatca gcgctgcatt gttacacgaa aactaagtac
      481 tatgcaatac ttctaaagaa aaattcaata ctactaaaga aggatcatct tgatgcatgc
      541 gggccgagcg aggttcggga aggattgcag gatggcttct gagaagctat ttgccgggtc
      601 tgatgtttgg gagatggcaa tgcgaatata gacgagtcga taagagatgt ttacaatccg
      661 gtaagttttg ttggcttgcg ttcacgggca tttgcttgcc atgaacgggt aacggcgggg
      721 gccttgaaga agactagaag ccgagcacgt tcgaaacgca gccggtttat gcgggcgcgg
      781 tatcgccggc ggcggcggct ggcggtactc gttctggcct ctctgttttt cggtatcggg
      841 acgcaagcgg ctgccttctt cgaggctgag gaggcgggct ccgcaagcac ggcggagact
      901 gccgggtcct ctggtttcgt acctgccaca ttcgagggct tgctcgcgca gggagattcc
      961 agcacgattc cggcggacga ggttcgcacc ccggcccaca agacaacgaa ggatctggca
     1021 tcgtcccgca gccgggagcc gaccaacggg ggcagggagc agtccgcccg caaagaggcc
     1081 ctcggggcga gaaaagaagc tgagcaggcc tcgggcgagc cgctcgacgt gctcgtcctt
     1141 ggtgtcgacc ggaggcccag ctcggctgag ggcctctcca cgcgctcaga caccatgatg
     1201 ctcgtccggg tgactcccgc tacgggagag ataaagttac tctccgtccc tcgcgacctg
     1261 tatgtagatg tggagcccgg agaaaacgac cgcatcaata ccgcctacgc ccacggcggc
     1321 gtagaccagg ccagggcggt gatggaggac ctcacgggcg ttgacataga caactacgta
     1381 atcgtggatt tcgagggctt cgagaaagtc atagacgcca tgggtggagc cagggtagat
     1441 gttgggactg gggtgttccc cga
//
LOCUS       DASQSL010001708         1596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_192093, whole genome shotgun sequence.
ACCESSION   DASQSL010001708 DASQSL010000000
VERSION     DASQSL010001708.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192093"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            253..612
                     /locus_tag="VE844_17340"
     CDS             253..612
                     /locus_tag="VE844_17340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03050.1"
                     /translation="MDTAAKPTRENRTITVDFRDEATYFHLIKDGKAFVEFVLAFLLS
                     LGFQLKHQATCRGGGCLTRHSHYVRVRLGGVTIWRMQCTRCKAVFTVLPHFILRSRQM
                     RPDVARNALMATHGGLS"
     gene            625..1512
                     /locus_tag="VE844_17345"
     CDS             625..1512
                     /locus_tag="VE844_17345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03051.1"
                     /translation="MLCHISPMALYRLICALGQQSVVTVLTRCGLPLPVYFLADEKHS
                     HCLTDKVYLPTIVRGRVVWHLGYTENASAVAFSESYAVFQRAVLQQEPAYRGRGILTD
                     GFDSTTKSLRTLFPGARLGNCLRHAIIKLPKKLAAITSPVRQAWRSHFHTLLYRARQR
                     RGLRVFALGQQLRRFADHVATTAGTANGERVRRWFQDKKAGWYAVLEDSQMPVTSTFL
                     DQAHNAIERKLFAMKAFHHPGGSQQAFLTGLAHLYNLVPYQRRAQHGGHCGVEVEGGT
                     LPTRDWFLNLQILTSGSFQ"
BASE COUNT          317 a          481 c          446 g          352 t
ORIGIN      
        1 cgatcttctg atggttgtcc ccgatgcgac cattgacaac ctgatagact ttctggaaga
       61 gccggaggca gtccggccat acctctcgga acttgacgac ccaatgacga agcggttttt
      121 caacacccaa tttcacattc caccggattt agtggtaagg ccctgagccc ttcacgattg
      181 tcttgagatt tcaacgtgtt acccccatca tgcctcatca gctgacgaga cctgatgaca
      241 gagggataac acatggacac agcggccaaa ccgacgcgag aaaatcgcac catcaccgtc
      301 gattttcgag acgaagccac ctacttccac ttgattaaag acggcaaggc gtttgtcgag
      361 ttcgttctcg cttttctcct gtcccttggc tttcaactga agcaccaggc cacctgtcgc
      421 gggggcgggt gtctcacacg ccactcacat tatgtccgtg ttcgtctggg gggagtcact
      481 atttggcgga tgcagtgtac acggtgcaaa gccgtgttca cggtgctgcc gcatttcatc
      541 ttacgctctc gccagatgcg accggacgtg gcccgcaatg ccctgatggc cacccatggc
      601 ggattgagtt gagaactgtg tgcggtgctg tgtcacatct cgcccatggc cctctaccgt
      661 ctgatctgcg ccctgggcca gcagagtgtg gtgactgtgt tgacccggtg tgggctaccc
      721 ctgcctgtct atttcctggc cgatgagaag cacagccatt gtctcactga caaagtgtat
      781 ctgccaacga ttgtccgtgg ccgcgtggtc tggcatctgg gatacactga gaacgccagt
      841 gccgtggcgt tctccgagtc ctatgcggtg tttcaacgcg cggtgctcca gcaggagccg
      901 gcctatcggg gccggggtat cctgacggat ggctttgaca gcaccaccaa gagcctgcgg
      961 acgttatttc cgggcgcgcg cctcggcaac tgcctgcgcc acgcgatcat caagctcccg
     1021 aagaaactgg cggccatcac gtcgcctgtc cgccaagctt ggcgctcgca ctttcacacc
     1081 ttgttgtacc gggcgcgaca gcggagaggc ttacgggtgt ttgcactcgg ccagcagtta
     1141 cgccgctttg ccgatcacgt cgctaccaca gctgggactg ccaatggcga gcgggtgcga
     1201 cgctggttcc aggacaagaa ggccggctgg tatgcggtgc ttgaagactc ccagatgccg
     1261 gtgaccagca ccttcctgga tcaggcccac aacgccatcg agcggaagct cttcgccatg
     1321 aaggcgtttc accatccagg tggcagccaa caagcgtttc tcacagggct ggcacacctc
     1381 tacaacctgg tgccgtatca acgccgggcc cagcatggcg gccactgtgg cgtggaagtc
     1441 gagggcggga ctttacccac acgtgattgg ttcctcaatc tacagatcct cacgtcagga
     1501 agctttcagt gagcacctgg cccgctctac cactaaatcc ggtggaatgt ggaaatgagc
     1561 agtggtcggg ccttaataga tttcaacttt ctcagc
//
LOCUS       DASQSL010001709         2560 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_171880, whole genome shotgun sequence.
ACCESSION   DASQSL010001709 DASQSL010000000
VERSION     DASQSL010001709.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2560
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171880"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            56..1711
                     /locus_tag="VE844_17350"
     CDS             56..1711
                     /locus_tag="VE844_17350"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020503097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HZC03052.1"
                     /translation="MTHYVFTTGGVVSSLGKGIATASLGALLEARGLKVSLVKLDPYI
                     NVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFVRTRMTKSNNYTTGRIYENVIRKE
                     RRGDYLGATVQVIPHVTDEIKACIKKGAGEADVALVEIGGTIGDIESQPFLEAIRQLR
                     VELGSKHTLFIHLTLVPYIASAGEVKTKPTQHSVKELRSIGIQPDILLCRSDRPLPES
                     ERKKIALFTNVEERAVISAIDVDNIYKIPRLYHEQGLDTIVVEKFGLKVSDANLNEWD
                     RVLYGMEHPLAQVTIAMVGKYVGLTESYKSLSEAFTHGGLRTRTRVNLAYVDSERIER
                     EGTACLEGMDAILVPGGFGGRGIQGKIETVRFAREHAIPYLGICLGMQIAVIEFARNK
                     AGLHGAHSTEFNPKTPHPVLALVTEWTTTEGALERRDVSSDLGGTMRLGGQPCRLLPG
                     SQVRSIYGKEVIVERHRHRYEFNNRYADLLEGVGSSITGRSIDGHLVEIVEISQHPWF
                     IGCQFHPEFTSTPRNGHPLFESYIHAALAHQAAKKPAIKDVAM"
     gene            1698..>2560
                     /gene="kdsA"
                     /locus_tag="VE844_17355"
     CDS             1698..>2560
                     /gene="kdsA"
                     /locus_tag="VE844_17355"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005222601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HZC03053.1"
                     /translation="MLLCDFEAGPDRPLFLIAGPCVIESEALAIETAGYLKELTASLG
                     IPFIYKSSYDKANRTSLKSYRGLGIAQGLKILQKVRGAIGVPVLTDVHEDSPLDEVTA
                     VVDVLQTPAFLCRQTNFIQHVARQGLPVNIKKGQFLAPWDMRHVVEKAKATGNENILV
                     CERGASFGYNYLISDMRALAILRETGCPVVFDATHSVQLPGGQGSVSSGQREFVPVLA
                     RAACAVGIAGIFMETHPRPDEALSDGPNAWPLAEMRGLLEILKELDEVVKLRLIKSAE
                     GGTHVQNKTDP"
BASE COUNT          555 a          718 c          737 g          550 t
ORIGIN      
        1 ttatatccaa actattcttt attctcccct atctccttaa agataatcgc ctcatatgac
       61 tcattacgta ttcactacgg gtggtgtggt atcctcgctc ggcaagggga tcgccacggc
      121 ctccttgggt gcgctcctcg aggcgcgtgg cttgaaggtg tcgctggtta aactcgaccc
      181 ctatatcaac gtcgatcctg ggaccatgag ccccttccag cacggcgagg tgttcgtgac
      241 cgaggatggg gcggagaccg atctggacct tgggcattac gagcgcttcg ttcgaacccg
      301 gatgacgaaa agcaacaact acacgaccgg ccgcatctat gaaaacgtga tccgtaagga
      361 acgccgaggc gattatctcg gcgctacggt gcaggtgatc ccccatgtca ccgatgagat
      421 caaggcctgt attaaaaaag gcgcgggtga ggccgatgtg gccctggtcg agatcggggg
      481 tacgattggc gatatcgaat cccagccgtt cttagaagcc atccgtcagc tgcgggtgga
      541 actcggatcg aaacatacct tgtttatcca tctcacctta gtgccttata tcgcctcggc
      601 gggcgaggtc aagaccaaac cgacccagca ctccgtgaag gaactgcgtt cgattggtat
      661 ccagccagat atcctgctgt gccgctccga tcgtcctctg cctgaaagcg aacgtaaaaa
      721 gatcgcccta tttaccaacg tcgaggaacg ggcggtgatc tcggccatcg atgtggacaa
      781 tatctataag atcccacggc tataccatga gcaaggactc gatactatcg tcgttgagaa
      841 atttgggctt aaggtatccg atgctaacct aaatgagtgg gatcgtgttc tctacggcat
      901 ggagcacccc ttagcccaag ttaccattgc catggtcggc aaatatgtgg gtctgaccga
      961 gtcctataaa tcgctctccg aggccttcac ccacggggga ctgcgtaccc gcaccagggt
     1021 gaatctcgcc tatgtggact ccgagcgtat cgaacgcgaa ggcaccgcct gccttgaagg
     1081 catggacgcc atcctcgtgc ccggggggtt tggtggaagg ggtatccagg gcaagatcga
     1141 gacggtccgg tttgcgcgcg aacacgccat accctatctt gggatctgtc tcggcatgca
     1201 gatcgctgtc atcgaatttg ctcgcaataa agcggggctt cacggggctc atagcacaga
     1261 atttaatccc aagactcccc atcctgtgct cgcgctggtg accgagtgga ccaccaccga
     1321 gggcgcccta gaacggcgcg acgtctcctc ggatctcggt gggactatgc gccttggcgg
     1381 ccagccctgc cgcctattgc cggggagcca ggtacggtcc atctacggta aggaggtgat
     1441 cgtcgagcgt caccgccacc gttatgagtt caacaaccgc tatgccgatc tactggaggg
     1501 ggttgggtcg agcattaccg gccgctcgat cgatggccat ctggtggaga tcgtcgagat
     1561 ctcccagcat ccctggttca taggctgtca gttccaccct gaatttacct ccaccccgcg
     1621 gaatggacat ccgctctttg agagctatat ccacgctgcg cttgcccatc aagcggcgaa
     1681 gaaaccggcg attaaagatg ttgctatgtg atttcgaggc aggaccggac cggcctttgt
     1741 ttttgatcgc aggcccctgt gtcatcgaaa gcgaggcact ggcgatagag accgcgggct
     1801 acctcaagga actcaccgcg agtctaggca ttcccttcat ttacaagtcc tcctacgaca
     1861 aggccaaccg cacctcgctc aagagttatc ggggattagg catagcgcaa gggcttaaga
     1921 tcttgcaaaa ggtccggggt gcgatcgggg tgccagtctt gaccgatgtc catgaggact
     1981 caccgctcga tgaagtcacc gcggtcgtcg atgtgctgca aaccccagcg tttttgtgtc
     2041 ggcagacgaa ctttatccag catgtcgccc gccaggggtt gccggtgaac atcaagaagg
     2101 gccagttcct agcgccctgg gatatgcggc atgtggtcga aaaggccaag gccaccggca
     2161 atgaaaacat cctggtttgc gagcgcggcg cctcgtttgg gtataattat ctgatctccg
     2221 atatgcgagc cctggctatt ttgagggaaa ccggctgtcc tgtggtattt gacgccaccc
     2281 actccgtaca gcttccgggc ggccagggga gcgtgtcctc gggccagcgc gaatttgtgc
     2341 cggtgctggc gcgggcggct tgcgcggtcg ggatcgctgg gatcttcatg gaaacccacc
     2401 caaggcccga tgaggcccta agcgatgggc cgaacgcctg gccgcttgca gaaatgagag
     2461 gcttgctcga gatcttgaag gagctcgatg aggttgtaaa actacggctg ataaaaagcg
     2521 ccgagggggg aacccatgtc caaaataaaa cagatccatg
//
LOCUS       DASQSL010001710         1212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_117459, whole genome shotgun sequence.
ACCESSION   DASQSL010001710 DASQSL010000000
VERSION     DASQSL010001710.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1212
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117459"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(205..>1212)
                     /locus_tag="VE844_17360"
     CDS             complement(205..>1212)
                     /locus_tag="VE844_17360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013074275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZC03054.1"
                     /translation="LLEGLDFTLLVINAKHIKAVPGRKTGVKDAEWIADLLRHGLLQG
                     SYIPDRSQRELRELVRYRRNLIRQRAQVVNRIQQALEGANIKLSSVATDITGASGREM
                     LQALAEGDDDPQHLAALAKGRLRNKGLELVQALKGMMGPHQRMLRQSQLRHLDFLAQE
                     IAQLDQEVEQRRGPFEEAIQAADAVPGIGLRAAEEILAELGTDMSRFPTEGHLSSWAK
                     VCPGNNESAGKRKNGHTGHGNPWLRSALVEAAWSAARTKVSYLSAQYHRVAARRGAKR
                     AILAVAHSILVIIYHLLRDGTTYRDLGGNYFDERNRQATVRRAARHIEALGYKVTLQA
                     V"
BASE COUNT          235 a          374 c          358 g          245 t
ORIGIN      
        1 acctggcaat ggtttactgg gctcagggga agcttaggga ggcagcggag gaactgaagc
       61 aggttgtgca gcttgaccag ctggtgcaaa gccctgatct ggagtcagac cgagctgtac
      121 tggcccaggt gcaagaggaa atagatgcat catgaggaag aacctagggc aaagttcaag
      181 ggaatttcct cagaaaatag gggttcaaac ggcctgcagg gtgaccttgt agcccagagc
      241 ctcgatgtgg cgggcggccc gccggaccgt ggcctggcgg ttccgttcat caaagtagtt
      301 accgcccaaa tctcgatagg tagtgccgtc tcgcagcaga tgatagataa tcaccagaat
      361 actgtgggcc actgccagga tggctcgctt ggcacctcgt cttgccgcca ctcggtggta
      421 ctgggccgac aggtagctca ctttggtacg ggctgcgctc caggccgctt ctaccagggc
      481 cgaacgcaac cagggattgc catgtccagt gtgcccattc ttgcgtttgc cagcgctctc
      541 attattccca gggcagacct tggcccagga agaaaggtgg ccctcggtgg gaaagcggct
      601 catatcagta cccagttcag ccagaatctc ttcagcagcc cgcagcccga tgcccggaac
      661 ggcgtcggcc gcctggatcg cttcttcaaa agggcccctg cgctgctcca cctcctggtc
      721 caattgggca atctcctggg ccagaaagtc caggtgccgc agctggcttt gccgcagcat
      781 acgctggtga ggtcccatca tccccttcag ggcctgcacc aattccagac ccttgttgcg
      841 caggcgtcct ttagccagcg ccgccagatg ctgggggtcg tcatcaccct cagccaaagc
      901 ctgcaacatt tctcgccccg atgccccagt gatgtcggta gccacgctgc tcaacttgat
      961 gttggctccc tccagggcct gttgaatccg gttcaccacc tgggcccgct ggcgaatcag
     1021 gtttcggcgg tagcgcacca actcccgcag ttcccgctgg gaccggtccg ggatgtagct
     1081 cccctggagc agtccgtgac gcagcaggtc agcaatccat tccgcatcct tgacgccggt
     1141 cttgcggccg ggcaccgcct tgatgtgctt ggcgttgatc accagcaggg tgaagtccaa
     1201 cccctctagg ag
//
LOCUS       DASQSL010001711         1003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_149103, whole genome shotgun sequence.
ACCESSION   DASQSL010001711 DASQSL010000000
VERSION     DASQSL010001711.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149103"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            240..>1003
                     /locus_tag="VE844_17365"
     CDS             240..>1003
                     /locus_tag="VE844_17365"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZC03055.1"
                     /translation="MRTRPRRRLGSWIRRGVLGLIIGLVALAVIGAIYQAFGTEIYRR
                     IYPPPGELVDVGGHSLHINCVGEGSPTVILESGSGATSVDWANIQPEVANTTRVCAYD
                     RAGSGWSEPGPGPGDPQQIAGELHTLLGNAGIDGPYVLVGHSFGGLYVRMYAELYPNE
                     VEGMVLVDSSHPEQSARSAGAQTTPESSAQVLLSTQSLGDKPLAVITAGEQQEPIWFE
                     LQEELATLSSDSVHRVVEGATHGSLLDDQRDAQVTST"
BASE COUNT          206 a          291 c          315 g          191 t
ORIGIN      
        1 ctatttaccg agctgccgag aagaagagtt ctcggaaact gggcttccgc tattgaagga
       61 tgtcggaaac tgagtttccg agaagacctc ttagcgacaa ttgggtgaat agaggcaccg
      121 gggcagcctt ctactgtagg cgcaagctct cctcacaatc ttgacccctt cgttctttgc
      181 gctcattatt gaagtaggaa ggaggttctc ctattcagcc gcagcaggct cctacgcagg
      241 tgcgaacacg accaaggaga aggctgggat cttggatccg acgcggagta ttggggttaa
      301 tcatcgggct ggttgccctt gccgtcatcg gagcgatcta ccaggccttc ggcacggaga
      361 tatatcgacg catctatcct cctcccggtg agctcgtcga cgtgggcggt cacagcttgc
      421 acatcaactg cgttggagag ggcagcccaa ccgtaatctt ggagtctgga tcgggcgcca
      481 cgtcggtcga ctgggccaac atccagccag aggtcgcaaa taccacgcgc gtgtgcgcct
      541 acgaccgggc cggtagcggc tggagtgagc caggccccgg gcccggcgat ccccagcaga
      601 tagccggtga gctacacacc ttgctcggca atgccgggat cgatggcccc tacgtactgg
      661 tggggcactc cttcggtggc ctgtatgtgc gaatgtatgc tgaactgtac ccgaacgagg
      721 tggagggcat ggtcctggtc gactcctcgc acccggagca gtccgcgcgc tcggcaggag
      781 cgcagacgac ccccgaaagc agtgctcagg tgctgctcag cacgcaaagc ctgggtgaca
      841 aaccgctggc ggtcatcact gccggcgaac aacaggagcc catctggttc gaactgcagg
      901 aggagctggc cacactctcg tcggacagcg tccaccgcgt agttgagggg gcaacgcacg
      961 gatcgctgtt ggacgaccag cgtgatgcgc aggtgactag tac
//
LOCUS       DASQSL010001712         1731 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_199476, whole genome shotgun sequence.
ACCESSION   DASQSL010001712 DASQSL010000000
VERSION     DASQSL010001712.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1731
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199476"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..382
                     /locus_tag="VE844_17370"
     CDS             <1..382
                     /locus_tag="VE844_17370"
                     /inference="COORDINATES: protein motif:HMM:NF003995.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="redox-sensing transcriptional repressor Rex"
                     /protein_id="HZC03056.1"
                     /translation="VGAGNLGSAIADSTILPKRGFVIHDVFDNDPEKIGRTVGNIVVK
                     HIDELKKSVAAADEIIGIIATPSSSAQGVAELMVEAGIKVILNYTDVLLHVPYGVDIH
                     RIDPTAQLMHTLYYLTQVGGEAAS"
     gene            complement(978..1412)
                     /gene="ssb"
                     /locus_tag="VE844_17375"
     CDS             complement(978..1412)
                     /gene="ssb"
                     /locus_tag="VE844_17375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011563044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HZC03057.1"
                     /translation="MVSFNRVVLAGNLTRDPELRFTSSGIPVCEFGLAVNRVRSKSEE
                     VDFFDITAWRELGETIANYKKKGDPILVEGKLQYRTWEAQDGSKRSKVDVVADNVQFL
                     GRSEGGGEAGAPSGGGQRARAGQRGSRDDVELNEEDFDDIPF"
BASE COUNT          364 a          516 c          461 g          390 t
ORIGIN      
        1 ggtgggcgcg ggcaacctcg ggagcgccat agcggatagt actatcctcc ccaagcgagg
       61 gttcgtgatc cacgacgtct tcgacaacga tccggagaag atcgggcgta ctgtcggcaa
      121 catcgtcgtc aagcacatcg acgagctgaa aaagagcgtc gcggcggccg acgagatcat
      181 cggcatcatc gccaccccct cctcctccgc ccagggcgtc gccgagctga tggtcgaagc
      241 gggcatcaag gtcatactca actacaccga cgtcctcctc cacgtcccct acggtgtgga
      301 catccaccgc atagatccca ccgcccaact catgcatacc ctctactacc ttacccaggt
      361 aggcggagaa gcagcttctt aaaaactggt cagaattcag cttgcggctt ctggtatcaa
      421 ccagaagccg cttttctttt ccgaacggcg tagtctggat attgaccgcg aaccgcgccg
      481 tccatcattt gactgaatgt tgaaatgccg tccggctgac catctcggaa aaggggaaga
      541 gcccgggaca ctcttagggg tgataggtgg ggaaagggaa aggaggagtg cgccccgggc
      601 tctttaattg tgtcgatttg gtatcgcacc aaccgacgct gagactatac cgcgctcgtc
      661 acactttgta aaggttttgg aacacaaaac caagattttt cctgccgcca gccacaaaag
      721 tcacacaata ttctgcgtgc gcaagtctca cccccagcag atgttggggc tcaagatatt
      781 ttcttaacaa accttctttt tgcttctttt gctgtacatc ggacgcctat gttggtacga
      841 aacaggcctc gatcccgcct ccgctaacga gccgctgtta cccggaaaac tagggtggag
      901 agttgtgcag ttacgtaact cgtttaggtc gccaacagaa ccttaccagg acggtagtcc
      961 actacttttt gcgcctatca gaagggtatg tcgtcaaaat cctcttcgtt tagttccacg
     1021 tcgtcccggg agccgcgttg gccggcacga gcgcgttgtc ccccgccgga gggtgcacct
     1081 gcttcgccgc cgccttcgct ccggccgagg aactggacgt tgtcggccac gacgtccacc
     1141 ttggagcgtt tggagccgtc ctgggcctcc caggtacggt attgaagttt gccctcgacg
     1201 aggatcgggt cgcccttctt cttatagttg gcgatggttt cgcccagctc ccgccaggcc
     1261 gttatgtcga agaagtcgac ctcttcgctc ttggagcgca cccggttcac cgcgagtccg
     1321 aactcgcaga ccggtatgcc gctgctggtg aacctcagtt cggggtccct ggtaaggttg
     1381 ccggcgagta ccacccggtt aaagctgacc atgtttgcgt cctccttttc tcgtcccttt
     1441 cgtacttaag tctagaagct aagtctacag aaatgtacct ccttctcaaa gggccaaatt
     1501 ccaaggctat cgtcccccct ggtgcgggta tgctctgatc tcgctccttc cactacagcc
     1561 gcgcgagaaa acacacccgc acaaccttac gcgaaggagt ttatccctgg aagggagccc
     1621 ggcgcatcac ccaaaggtcg tattcatggt acatcaaagg tcgcattttt cggcggcgag
     1681 gagttctctt ggagggatcg gggatgctgg gaaagacagt tccagttcga g
//
LOCUS       DASQSL010001713         1019 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_117473, whole genome shotgun sequence.
ACCESSION   DASQSL010001713 DASQSL010000000
VERSION     DASQSL010001713.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117473"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..537)
                     /locus_tag="VE844_17380"
     CDS             complement(<1..537)
                     /locus_tag="VE844_17380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017521553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HZC03058.1"
                     /translation="MAKYQTEDIRTLALVGQGGCGKTTLAEALLYKAGAIASMGSTER
                     GGTVCDYDPLEKTYYHSLKLAVTHLEHLNTHIYLLDTPGYPDFVGHALSALPAVETAA
                     VVINAQTGIEMIPSRMMHWAERRNLCRVIIVNKIDTENIDLPRLLKEIQETFGKECLP
                     INLPAKGASEVVDCFFNPG"
BASE COUNT          247 a          275 c          286 g          211 t
ORIGIN      
        1 gcctggattg aagaaacaat cgaccacctc gctcgcccct tttgccggaa gattgattgg
       61 caggcattcc ttgccgaagg tctcctggat ctccttaagt aatcgcggga gatcgatgtt
      121 ctcggtatcg atcttattga cgataatcac ccggcaaaga ttacgccgct cagcccagtg
      181 catcatacgg cttgggatca tctcgatacc ggtttgggcg ttgatcacga cagccgccgt
      241 ttccactgcc ggtaacgcac tcaaggcatg gcctacgaag tcggggtaac ccggggtatc
      301 gaggagatag atatgggtat taagatgttc gagatgggtg acggcgagct tgagggagtg
      361 gtaataggtc ttctccaaag gatcataatc gcacactgtc ccgccacgct ccgtgctacc
      421 catgctggca atggcgccgg ccttgtacaa cagggcctcc gccaaggtcg tcttgccgca
      481 accgccctgt ccaaccaggg ctaaggtgcg gatatcttcg gtttgatact tagccatcgt
      541 aaaccccctc acatagtgat attagcctga atagcgagta taaaagcctt aggaccatac
      601 cgcaaggaaa gcgcccgaga cccgattaaa ttacagggac tgcatggttt acagcgggtg
      661 cgtcttctgc tacaggcacc aaatcaacaa aacaaactat cgttggagca actgaatggg
      721 caacggctgg acaccagaac attgcaagtg gcaagcagcg ctgatccaca actggcgacc
      781 gtgggagaag tcgccggacc aaggtctcca gagggtaagg catggatatc ccgcaatgcc
      841 tataagggcg ggttcaggct gcacttgcaa gcgcttgcgc gagcattgtg ggagcagaag
      901 tgcggcgttg ggttcagcat cacggacagc ttatccgcca ggccgaacag gtggaggttc
      961 aagcattgct ggaacacgag tcgctcagcg actggcaagc ctgcttggcc cccctccaa
//
LOCUS       DASQSL010001714         1426 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_192148, whole genome shotgun sequence.
ACCESSION   DASQSL010001714 DASQSL010000000
VERSION     DASQSL010001714.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1426
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192148"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(60..1220)
                     /locus_tag="VE844_17385"
     CDS             complement(60..1220)
                     /locus_tag="VE844_17385"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIIE family protein phosphatase"
                     /protein_id="HZC03059.1"
                     /translation="MSAEENKTVVRRLIEEVYNRGNLDIADELLAPDYVDHTWPPGKY
                     AGREGLKRSVAKQRAAFSDLHNNIEEQIAEGDKVVTWVISSGTHDRERFLGLAPTGER
                     MTMKHIFISRVVEGKIVEVWGVGDISDVWQQRLQRERIERERVEQELQVARRIQQASL
                     PKEVPELKGWQISAFYQPAREVGGDFYDFLELADGRLGVVVGDATGKGVPAALMMAST
                     RSTLRAVAQASDSPGDVLRRVNDPLATDIPSNMFVTCFYAILDPKSGTLSYANAGHDL
                     PYLHRNGEAEELRARGMPLGLMPGMSYEERGVSLGEGGCVLFYSDGLVEAHDPKGEMF
                     GFPRLRELVAEHGAEKALGDCLLEELYSFVGEGWEQEDDITLLTLRRFASLS"
BASE COUNT          268 a          456 c          380 g          322 t
ORIGIN      
        1 tacacagtgg agcccattcg gattttccaa acagtctcgg aaggggaatt ctcagaagtt
       61 cagcttaggg atgcgaagcg tcgtagcgta aggagggtaa tgtcgtcctc ctgctcccag
      121 ccctccccca cgaaagagta aagttcttct aggaggcagt cccctagcgc cttctccgca
      181 ccatgctcgg ccaccagctc ccgcaaccta gggaagccga acatctcacc cttagggtcg
      241 tgggcctcca ccagcccgtc gctgtagaac agcacgcaac caccctctcc gagagagacc
      301 cctcgctcct catagctcat ccctggcata agccccagag gcatccccct ggccctcagt
      361 tcctcggcct caccgttacg atgcaggtaa ggcaggtcgt ggccagcgtt ggcgtagctc
      421 aaggtgccac tcttagggtc gaggatggcg tagaagcagg ttacgaacat gttggatggg
      481 atgtcggtgg ccagagggtc gttgacccgt ctcaacacgt ccccaggaga gtcagaagct
      541 tgggctacgg cacgtagcgt gctgcgggtg gaggccatca tcagggctgc tggcacgccc
      601 ttgcccgtag catccccaac caccactcct agacgtccat ccgctagttc caggaagtcg
      661 tagaagtcac ctcctacttc cctagctggt tggtagaagg cagagatctg ccagccctta
      721 agctcgggca cctccttagg cagtgaggct tgctggatac gcctcgctac ctgtagctcc
      781 tgctctactc gctcgcgctc gatcctctcc cgttggaggc gctgctgcca cacgtctgat
      841 atatcgccca cgccccacac ttccacgatc ttgccttcga ccacgcggct gatgaagatg
      901 tgcttcatcg tcatgcgctc cccggtaggg gccaacccca gaaatcgttc tcgatcgtgt
      961 gtaccgctac tgatgaccca ggtgaccacc ttgtcgcctt cggcgatctg ctcctcgatg
     1021 ttgttgtgga gatcggaaaa agcggctcgc tgcttagcta ccgatcgctt gaggccttct
     1081 ctaccggcat atttccctgg aggccatgtg tgatctacgt agtcgggggc cagcagttcg
     1141 tcagctatat ctaggttccc tcggttgtag acttcttcga tgaggcggcg cactacggtc
     1201 ttgttctctt ccgctgacat gtgagcattc tcctcgccaa ctcgtgtttt tctccaacgg
     1261 gtcgacacca tgtgcatgat gccacccgga ggggtggggc gcattgaccg gaagcttatt
     1321 caccgtagtg cgtggaagtg gtcttctcgg aagtccgtat ccacgatcct gcataccccc
     1381 gccccgatgc cctttgcccc ggtccaacgc atattcacta agctcg
//
LOCUS       DASQSL010001715         2075 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_171918, whole genome shotgun sequence.
ACCESSION   DASQSL010001715 DASQSL010000000
VERSION     DASQSL010001715.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2075
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171918"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..834
                     /gene="epmA"
                     /locus_tag="VE844_17390"
     CDS             <1..834
                     /gene="epmA"
                     /locus_tag="VE844_17390"
                     /inference="COORDINATES: protein motif:HMM:NF006828.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P lysine aminoacylase EpmA"
                     /protein_id="HZC03060.1"
                     /translation="NCDPHLHSLMTACTGADELAALYYLHTSPEFAMKRLLAAGSGSI
                     YQIARVFRDGEQGFWHNPEFTLVEWYRVGFDHHRLMEELEALLSQVLGTTSCRRSSYA
                     EIFQAYVELDPHHASLAELHRHTARLGLGFSPYACQDRDDYLNLILSHSIAPKLGWDR
                     PTFIYDFPASQAALARIRAGDPPLAERFELFIHGMEIANGFHELGDHIEQRRRFGAEL
                     ARRRQLGLPELPMDERLLAALEHGLPDCAGVALGFDRLLMAMTGAGDIAEVLAFPIER
                     A"
     gene            complement(856..1806)
                     /locus_tag="VE844_17395"
     CDS             complement(856..1806)
                     /locus_tag="VE844_17395"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HZC03061.1"
                     /translation="MMRRIFMAFFIGCAYSYGWLISAEELKGNSDLLPAGRYIHLKTH
                     RLYIHCMGDAQPAVVIDTGLGGSSLEWFQVQQALAKRLRVCTYDRAGYGWSDPGPSPR
                     ITSRIVEELHRLLDKAQVPPPYVLIGHSFGGFTARYFATLYPGQVVGVVLVDSSHPDQ
                     SRRMSVLAIHAKAKRSARDRIDIASLTQRADLPEEIRLASYLNSRRKALFAQMDEIKN
                     FALSATEVGAARPFPNVPLVVLSHGRHIWPVDPHGDRMEAIWRELQRSLSGLAPRSRH
                     IIAERSGHNIHLDQPELVVGAVETIVRRLAEPRDNLQKPP"
     gene            complement(1924..2073)
                     /locus_tag="VE844_17400"
     CDS             complement(1924..2073)
                     /locus_tag="VE844_17400"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HZC03062.1"
                     /translation="MVETAYITNPREEQKLINPAYQQALAHAIINGIRTYFKQNAPRT
                     LFVVR"
BASE COUNT          416 a          579 c          620 g          460 t
ORIGIN      
        1 aactgcgatc cccatctgca cagtttaatg acggcctgta cgggtgccga cgaattagcg
       61 gccctctact accttcatac ctcgcccgag tttgccatga aacggctttt ggctgccggc
      121 agcgggtcta tttatcagat cgctcgggtg ttccgggatg gcgagcaggg attttggcat
      181 aacccggagt ttaccctggt ggagtggtat cgggtagggt ttgatcacca tcggcttatg
      241 gaagagctag aggccttgtt aagccaggtg cttggcacga cttcctgcag gcgatcgagc
      301 tatgcggaga tatttcaagc ctatgtcgag ttggatcccc atcatgcaag ccttgccgag
      361 cttcaccgac acacggctcg actcggcctc ggattttcac cgtatgcttg tcaggatcgg
      421 gatgattatc tgaacctgat cctcagtcac tccattgcgc ccaagttagg ttgggaccgg
      481 ccgacattta tctatgactt tccggcgagc caagcggcac tggcgaggat aagagccggc
      541 gatcctcccc tcgccgagcg gtttgagctc ttcatccacg gcatggagat cgcgaatgga
      601 ttccatgagc tcggcgatca tatcgagcag cggcgccggt ttggcgccga gttggcaagg
      661 cggcgtcaat tgggactgcc tgagctgccc atggatgaac gtttgctcgc cgccttggag
      721 cacggactgc ccgattgcgc cggcgtggct ttgggcttcg accgtttgct catggctatg
      781 accggtgcag gcgatatcgc ggaggtctta gcctttccca tcgagcgggc ttgaccgcag
      841 caaaataccg ggcttctacg gcggcttttg caaattgtct ctaggctcgg ccagccgcct
      901 cacgatagtc tcgaccgcac ccaccacaag ctcgggttgg tccaggtgga tgttgtgacc
      961 gctgcgctca gcaatgatat gacgagaccg cggggccaag cccgacaacg atcgctgcag
     1021 ttcccgccag atcgcctcca tgcggtcccc gtgcggatcc acgggccaga tgtgccggcc
     1081 gtgggagagc acgaccagcg gcacatttgg aaatggccta gcggcgccta cttcagtggc
     1141 actgagcgcg aagttcttga tctcgtccat ctgcgcaaac agggccttgc gtctggaatt
     1201 gaggtaggag gccaagcgga tctcttcggg caggtctgct ctttgagtga ggctcgcgat
     1261 atcgatccga tctcgtgccg agcgctttgc cttggcatgg atagccagta ccgacatacg
     1321 cctgctctga tccgggtggg aggagtcgac caacaccacg cccaccactt ggcctggata
     1381 cagagtcgca aaataacggg cggtgaaccc tccaaaagag tgaccgatca gcacataggg
     1441 gggcggaacc tgggccttat cgagcaacct gtggagttcc tcgacgatac ggctggtgat
     1501 gcggggagat gggccgggat cgctccaacc gtagccggcc cggtcatagg tgcagacacg
     1561 aaggcgtttg gccaaggctt gctggacctg gaaccactcg agtgaagaac cgccaaggcc
     1621 ggtatcgatc accacggccg gttgggcatc gcccatacaa tggatgtata aacgatgggt
     1681 tttgagatgg atgtaccggc ccgctggcaa tagatcacta ttgcccttta attcctccgc
     1741 gcttataagc catccatagc tataggcgca accgataaag aaggccatga atattcgccg
     1801 catcatcttc attccgcttg agcggcggcg gggggacagt acctcgggtg gagtcaaatc
     1861 ctttatcgct cctttatatc tggctaaggc tttcccgatt gcagatccgt cgggccagtg
     1921 ccactagcgc actacaaaga gggtcctcgg cgcattctgc ttaaaatagg tgcggatccc
     1981 gtttattatg gcatgagcca gggcctgttg gtaagcggga ttaataagct tctgttcctc
     2041 gcgggggttg gtgatatagg cggtctctac cagca
//
LOCUS       DASQSL010001716         1956 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_79881, whole genome shotgun sequence.
ACCESSION   DASQSL010001716 DASQSL010000000
VERSION     DASQSL010001716.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1956)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1956)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1956
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79881"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1300
                     /locus_tag="VE844_17405"
     CDS             <1..1300
                     /locus_tag="VE844_17405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013819839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HZC03063.1"
                     /translation="VNTRCPFGERVKNFPELCHMTSSVFGGVAARNFGYAKVELRKRI
                     ATHDGMCEVCIHTNPKAATQYAGTEYHRDDVPAVKPLVYETRQRMEERMRAVWCPVGE
                     LAAPMKECERASIVAHSPLMHETLLAVEKVAPTLATVLITGETGVGKEVIARAIHAMS
                     ERWNKNFVAVNCGAIPETLIESTLFGHEKGAFTGAHEVHHGLFHRAEGGTLFLDEINT
                     LSAATQVKLLRVLQEGEYERVGGSHTLSADVRIVAASNFPLDQAVERREFREDLYYRL
                     NVVHLRIPPLRERPEDIPSLVDHILGKLRHKYHKPIHTVSPAVMAQLAQYPWPGNVRE
                     LENVLERSFVFVTGSRLEHVEVPNQTRKFGNSSDGLTTPWAEIKKQALEDVEKRYLEL
                     ALKRFHGNVKEVAKSMELTPRAVYHKLTQYRLNPGAFRTR"
     gene            complement(1203..1517)
                     /locus_tag="VE844_17410"
     CDS             complement(1203..1517)
                     /locus_tag="VE844_17410"
                     /inference="COORDINATES: protein motif:HMM:NF024980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HZC03064.1"
                     /translation="MVNTIKQALEQRLDRKVALSSVYTLLHRHGWRKLAPDKRHRQTG
                     VAAKVFSVGIAIERHVVMVALAIDSQLPPTVYGRLRDSVGIASACDRRRVGSTPSTLP
                     LP"
     gene            1691..1816
                     /locus_tag="VE844_17415"
     CDS             1691..1816
                     /locus_tag="VE844_17415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03065.1"
                     /translation="MKLTDILIEQALALLSERYGQLPPGRTEELKQQILKEGMPL"
BASE COUNT          470 a          568 c          536 g          382 t
ORIGIN      
        1 agtcaatacc cgctgcccct tcggtgaacg cgtcaagaac ttccccgaac tctgccatat
       61 gacctctagc gtctttgggg gggtcgccgc ccgaaacttc ggctatgcca aggtcgagct
      121 gaggaagcgc attgccaccc acgacggcat gtgcgaggtg tgtatccaca cgaaccccaa
      181 ggcagcgaca cagtacgcgg ggaccgagta ccaccgtgat gacgtgccgg ccgtcaagcc
      241 cttggtatac gagacgcggc aacgaatgga agaacgcatg cgcgcggtct ggtgccccgt
      301 gggcgagttg gccgcaccca tgaaagaatg tgaacgcgca agtatcgtgg cccactcacc
      361 tttgatgcac gagaccctgc tcgcagtgga gaaggtcgcg ccgacactgg ccaccgtact
      421 gatcacgggc gaaaccgggg ttggtaagga ggtcatcgca cgcgccatcc atgccatgag
      481 tgagcgctgg aataagaact ttgtggccgt aaattgtggg gcgatcccgg agacactcat
      541 cgagagcacg ctcttcggcc acgaaaaagg ggccttcacc ggcgcccatg aggtccacca
      601 cgggctcttt caccgcgcgg aggggggaac gctgttcctc gatgagatca ataccctctc
      661 ggcagcaacc caggtcaagc tgttgcgggt gttgcaggag ggggagtatg agcgcgtggg
      721 tggtagccac actctctccg ccgatgtacg catcgtggcg gccagcaatt tccccctaga
      781 tcaggcggtc gaacgccgtg agttccgaga agatctctat taccgcctca atgtcgtgca
      841 tctcaggatc ccaccattgc gagaacgccc cgaggacatc ccttccctcg tcgaccacat
      901 attaggcaag ctccgccaca agtaccataa accgatccat accgtgagcc cggcggtgat
      961 ggcccaactc gcgcagtacc cctggccggg caacgtgcgc gaactggaaa acgtattaga
     1021 acgcagcttt gtcttcgtga cgggaagccg gctagagcac gttgaggtac cgaatcagac
     1081 ccgtaaattc ggcaactcct ccgatggcct cactacacct tgggcagaga tcaaaaaaca
     1141 ggctttagag gacgtcgaaa aacgctacct tgaactcgcc cttaagcgct ttcatggaaa
     1201 tgtcaaggaa gtggcaaagt cgatggagtt gaccccacgc gccgtctatc acaagctgac
     1261 gcaataccga ctgaatcccg gagccttccg tacacggtag gcggcaactg actgtcaata
     1321 gcgagcgcta ccattaccac atggcgttca atggcaatcc cgacgctaaa aaccttggcc
     1381 gcaaccccgg tttggcgatg ccgtttgtcg ggagcaagct tacgccagcc gtgacggtgt
     1441 agcagggtat agaccgagga taatgcgacc ttgcgatcta gacgctgctc tagggcttgc
     1501 ttgatcgtgt tgaccactaa ctgtagcgac tcgcaaagct aacgcgtcct gctcgcaaac
     1561 aagcacattc tcatgctcag attgtttgca aataagcccg ccactctgct cacattattc
     1621 tgcaaacgaa ctcacattca ttgccaactg ctcgcaaaca gcctagccta ctcacattca
     1681 gtgacaaaaa gtgaaactca ccgacatctt gatcgagcag gccttagcgc tactctccga
     1741 gcgctacggt cagctgccac cagggcgcac ggaagagctg aaacaacaga tacttaagga
     1801 gggaatgccg ctgtagctgg ccgattgaca gctaacgtga gccgaccacg ttgtttgcaa
     1861 gcagttgtca gttaatctga gcgcgttggc agataacgtg agcagaaaga ccgatgtatt
     1921 ggcagttaat ttgagtttat cacgatgctt gtttgc
//
LOCUS       DASQSL010001717         1168 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_117490, whole genome shotgun sequence.
ACCESSION   DASQSL010001717 DASQSL010000000
VERSION     DASQSL010001717.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1168
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117490"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..670)
                     /locus_tag="VE844_17420"
     CDS             complement(<1..670)
                     /locus_tag="VE844_17420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03066.1"
                     /translation="MLLGVAMGMVVPKVRKHLCADALLRSVQNVFCQVPDHRKGDAEI
                     PLRDALMSAFALFSLKSPSLLAFDKERTEGHLQRVYGIGRVPCDTSMREILDPVEPEH
                     LRPAFKVGFRHLQRGKALEQRVFVQGPYLLALDGTGYFASQEIHCDSCLEKHHRNGTV
                     TYSHQMLGAALIHPERREVIPLMPEPIVKQDGSEKNDCERNATKRFVTKFRQDHPHLK
                     VIVTE"
     gene            complement(756..>1168)
                     /locus_tag="VE844_17425"
     CDS             complement(756..>1168)
                     /locus_tag="VE844_17425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03067.1"
                     /translation="VVGRPAAYRKDGGRELKKAPDVLSERGLGSPVIDDISHAVANML
                     KRRYETHPQFATFLSACGRVSSRLKHTVLACLTPPKVQTRSRFMNVHRLVRWADRVLG
                     LSPAGRAPAGSVLSKLRTCLDDLPACRTAISGGQ"
BASE COUNT          249 a          323 c          364 g          232 t
ORIGIN      
        1 cttccgtgac gatgaccttg aggtgggggt gatcctgacg aaatttggtg acaaagcgct
       61 tggtggcatt gcgctcacaa tcatttttct cactgccgtc ctgtttgaca atgggctcgg
      121 gcatcaaggg aatgacttcg cgcctctcgg ggtggatgag ggccgctccc aacatctgat
      181 gggaataggt cacggtaccg tttcggtggt gtttttccag gcacgagtcg cagtgaatct
      241 cttgggaggc aaaatagccc gtgccatcga gggccaacag ataagggccc tggacaaaga
      301 ccctctgttc aagggctttg ccacgttgaa ggtggcgaaa tcccactttg aacgcgggtc
      361 tcaggtgttc gggctcaacc gggtcgagaa tctcgcgcat cgatgtatca cacggcaccc
      421 gcccgatgcc gtaaacgcgt tgcaagtggc cctcggtgcg ttccttgtca aaggcgagca
      481 gcgaaggcga tttgagggag aacagggcaa aggcggacat cagggcatca cgcaacggga
      541 tctcggcatc gccttttcgg tgatcaggaa cttgacaaaa gacgttttgt accgagcgca
      601 acagggcatc ggcacagaga tgtttgcgca ccttaggaac caccatgccc atagcaaccc
      661 ccagcagcaa ataggcctat tcatgtcagg agagccacat tttgacatgg cggtttacga
      721 aaagacaagt agaaataccc tatgaatgct ggcttttact ggcctccgga aattgctgtg
      781 cggcaggcgg gtaagtcgtc caggcaagtg cgaagtttcg acagcaccga gcctgccggg
      841 gcccggcccg ctggcgacaa gccaagcacg cgatcggccc agcgtaccaa gcggtggaca
      901 ttcataaagc gcgacctggt ttggaccttg ggtggggtca ggcaggccag cacggtgtgc
      961 ttgagtcggc tcgacacccg gccgcacgcc gacagaaagg tggcaaactg tgggtgcgtc
     1021 tcatagcgcc gcttgagcat gttggccacg gcgtgcgaga tgtcgtcgat caccgggctc
     1081 cccagcccgc gctcgctcaa cacgtcgggg gcttttttga gctcgcggcc accgtctttg
     1141 cggtaggcag cggggcggcc caccaccg
//
LOCUS       DASQSL010001718         2485 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_136232, whole genome shotgun sequence.
ACCESSION   DASQSL010001718 DASQSL010000000
VERSION     DASQSL010001718.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2485
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136232"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            906..2219
                     /gene="ltrA"
                     /locus_tag="VE844_17430"
     CDS             906..2219
                     /gene="ltrA"
                     /locus_tag="VE844_17430"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019910324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZC03068.1"
                     /translation="MDSSLCERPNPDPEETVREQNQASLATRPGKKQVHSLIDKVYSR
                     QNLELGWSRVKKNRGSAGIDNVTIAAFELRKSYYLELLHRKLRDGTYQPRPVKRVEIE
                     KSDGGVSKLGIPTVLDRVVQQALVQRMEPIFEPQFLPCSFGYRKGRSPHDAMGKIWRE
                     LQAGDGWIVDADLRSYFDSIDQSKLVDLIAEQISDGRVLNLVWDMLRAGVIQDGYWQP
                     TLTGVPQGAVVSPLWSNVYLTPFDRYMSQAGFQLTRWADDFVIVCKSRPEAERALALA
                     KRFLKDELGVALHPHKTRIVHVRHGFEFLGYKVKRGTGYQLPAHKRRSRSNPQNLYAV
                     PKAKSVKRFQDQIRALTRRKTPLTLREVIDQINPVIRGWGIFYRKAHVRRLFNRLDRW
                     IERRLHAFLAKKWRNGKWRSHPRSRLIEEFGLVRLTHLIPGLVNR"
BASE COUNT          582 a          648 c          794 g          461 t
ORIGIN      
        1 tgcgataacg cgagtgagga tcggaccctg cgcagtcata gaccctcagc atgccagtac
       61 gtgcatcgcg cgggacctgg gaggacctct agtcgccctt cggggccggg tgaggaaggc
      121 cgaggccgta cgctcaccat gcacgaccag agggagtcag acaacggtat agtgtgtgcc
      181 tggcagcaca tgtgtcaggt gggttgaagt cccactcaac ctgagacccc aggttgatat
      241 ccaaaagtgg gggtaatgcc tcactggccg aagagcgaga ccggtatgga gcaccctaaa
      301 cgggcacgaa cgcgaaagca ggacacggcc aaggggaacc tgaagccatc tcgcgtgaac
      361 cttcggaggg cagggcgcct ctcgtgaggg agggtctgaa gggcttgcgg agaaccaccg
      421 ggtcgtaatc aaagggagct atcccacaga tgaaccggtc ggccaaaggc ggggaatggt
      481 cgagcctgca ctatgaaggc gaaggcgctt gggttccccc ctgccgtacc aaggtgtgtg
      541 cgggcgacac ggtggggaag acaggtgtgt gacccaggga ggcctggtat cgtccaactg
      601 aagaggtatg atcgcaatgg tgtgacaccc gcagacgaaa gggcgggtca attgggaata
      661 caaagcgcga tctgaagcca tcagggggta ggcgcggata taagcgcgag cgaaattcta
      721 gccgatgcgg tgccaggagt cggagcaggg cgtattactg aggaacgagg gaacaacaga
      781 aactctcgga tcacagcctg gagcggtgac gccagcgtca cccaaaaggg acggtggagg
      841 gggaaggctc tgtgctctgt tgtgtcgagg ccatgcgacc aaacggcgag taaggagagg
      901 ccaggttgga cagttccctt tgcgaaagac ccaaccccga ccccgaggaa accgtgcgcg
      961 agcagaacca agcctcatta gcgacaagac ctggaaagaa gcaggtccac tccctgattg
     1021 acaaggttta tagtcgacag aatctggagt tgggctggtc gagagtcaag aagaaccgcg
     1081 gcagcgctgg cattgacaac gtcacgattg cggcgtttga gcttcgcaag tcgtactatc
     1141 tggaactctt acatcgtaaa ttgcgtgacg gcacctacca gccgcgtccc gtcaagcggg
     1201 tcgagatcga gaagtccgac ggcggcgtca gcaagttggg cattccgacc gttttggatc
     1261 gggtcgtcca acaagcgttg gtccaacgga tggaacccat ctttgagccg cagttcctgc
     1321 cgtgctcctt tggctatcgc aaagggcgtt cgccacacga tgccatgggc aaaatttggc
     1381 gggaactcca ggcaggggat ggctggatcg tcgatgcgga tctccgctcg tacttcgact
     1441 caatcgacca aagcaaactc gtcgatttga ttgccgagca aatcagtgat ggacgcgtgc
     1501 tgaacctggt ctgggacatg ttgcgtgctg gggtgattca agatggttat tggcagccga
     1561 ccctgacagg tgtacctcag ggtgcggtgg tgagcccctt gtggtccaat gtctatctga
     1621 cgcctttcga ccgttacatg agccaagccg ggttccaact gacacggtgg gccgatgact
     1681 ttgtcatcgt ctgcaagagc cgcccagagg cggaacgagc actggcgcta gccaagcgct
     1741 ttcttaagga cgaattgggt gtggccctcc atccgcacaa aacgcggatc gtccacgtcc
     1801 gccacggttt cgaattcctg ggctataagg tgaagcgagg aacaggctat caactgccgg
     1861 cacacaaacg ccgcagtcgg tcaaacccgc agaatcttta tgctgtccca aaggccaagt
     1921 cggttaaacg gtttcaggat cagattcggg cgctgacgcg tcgcaagacg ccgctgacgt
     1981 tacgggaggt gatcgaccag atcaatccgg tgatccgagg ctggggcatc ttctatcgca
     2041 aagcgcacgt ccgacgcctg tttaaccggt tggatcggtg gattgagcga cgcctgcacg
     2101 catttctggc caaaaagtgg cggaacggca aatggcgaag ccatccgcga tctcggctga
     2161 ttgaggaatt tggcctggtc cgtctcaccc atctcattcc aggtttagtc aatcgatgag
     2221 cctatggcgg gcaacagagg aaagcggctt acgggaaaac tgtacgggcc gtttgaacga
     2281 gcggacggag gaagggcctc acggcccgac ctcctccgac tctacaggcg ccatctggcg
     2341 ctgaaggcct gaacgatatg gagtggttag taggagttcg atcttgtgag cgatgttaaa
     2401 gccagcaaac cgatccagat ggcctttaac tgggaagctg aggtgaagcc tcggggacct
     2461 ggagctgaca gttggacaca aatat
//
LOCUS       DASQSL010001719         1755 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_26777, whole genome shotgun sequence.
ACCESSION   DASQSL010001719 DASQSL010000000
VERSION     DASQSL010001719.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1755
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26777"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            37..301
                     /locus_tag="VE844_17435"
                     /pseudo
     CDS             37..301
                     /locus_tag="VE844_17435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009146848.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4160 domain-containing protein"
     gene            309..509
                     /locus_tag="VE844_17440"
                     /pseudo
     CDS             309..509
                     /locus_tag="VE844_17440"
                     /inference="COORDINATES: protein motif:HMM:NF021873.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2442 domain-containing protein"
     gene            complement(538..1428)
                     /locus_tag="VE844_17445"
     CDS             complement(538..1428)
                     /locus_tag="VE844_17445"
                     /EC_number="2.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005960689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004337 - geranyltranstransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="farnesyl diphosphate synthase"
                     /protein_id="HZC03069.1"
                     /translation="MSIAQLIQEFQCRVEQALDRWLPLETVQPRRLHEAMRYAVLGQG
                     KRVRPSLVYATGYVIGVEGRALDGPASAVELVHAYSLVHDDLPSMDNDDLRRGRPTCH
                     RAFDEATAILAGDALQALAFRVLAHDPEIRTTPSQRLEMIDTLAHACGSRGMAGGQAI
                     DLEAVGRELNLAELENMHIHKTGALIRASVKLGALSQPDIDRDLLAKLDHYAKCIGLA
                     FQVQDDILDVEGHTEILGKPQGSDIARNKPTYPNLLGLEGARQAAAELYHEAVESLAT
                     LGQAAEPLRWIADYIIRRDR"
     gene            complement(1435..1719)
                     /locus_tag="VE844_17450"
     CDS             complement(1435..1719)
                     /locus_tag="VE844_17450"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007894317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HZC03070.1"
                     /translation="MARKSAAIDFERSLRELEALVEKMETGNLSLEESLKYFERGIGL
                     TRLCQKALAEAEQKVKILLEKEGRLETFDPPDLEGNEGSPLGPEEERKND"
BASE COUNT          379 a          489 c          471 g          416 t
ORIGIN      
        1 taggggacgg gccacgattt ttacggagcc atgaccatgc ctattatctc aatgttttat
       61 gggatcatca tccgcatgta tctcctcgac aaccagcatc acaatctacc gcacttcatg
      121 ccaagtatgc tgagtttgag gcttccatcg gaattgcaga tgacgagata ctggccggag
      181 atttgccccg taagcaattg cggctggtgc aggcatggat agagctcacc acgatgaact
      241 actggccgat tgggaattgg ctatcggtgg tgaaacccct tacaagattg ctcccctgtg
      301 aggtagctat gtaccgggat atcaaatccg tcaagccgtt atccgactac cgtatctatg
      361 tggaaatcga ggatgggcgc aagggtattt ttgacctgaa gccctacctc ggtcacggag
      421 tcttccgtga acttagagat gtacagtact tcaatcgggt tgacatcttg tttggtgcag
      481 tgacgtggct aaatgagcag gacattgccc ccgaaatcct gacttggggg aggctgctta
      541 cctatcccgc cggattatat agtctgcgat ccagcgcaaa ggttccgccg cttgacctaa
      601 cgtggcgagg ctttccaccg cctcgtgata caattcggca gccgcttgcc gggcaccttc
      661 gagacccaaa agattcggat aggtaggctt attgcgagcg atgtcggagc cctggggttt
      721 gcccaggatc tcggtgtgac cttccacatc gaggatatca tcctgcacct ggaaagccag
      781 tccaatgcat ttggcatagt gatcgagctt ggccaacaga tccctgtcga tgtcgggttg
      841 cgataaggcg ccaagcttta cactggcgcg gatcaaggcg ccggtcttat ggatatgcat
      901 attttcaagc tccgcgagat taagttcgcg gcctaccgct tccagatcga tggcttggcc
      961 accggccatg cctcgcgatc cacaggcatg ggccagggta tcgatcattt caagccgttg
     1021 gctaggggtc gtcctgatct caggatcatg ggccaggacc cgaaaagcca gggcttgcag
     1081 tgcatcgccg gcgaggatag ccgtggcctc gtcaaaagct cgatgacagg taggacggcc
     1141 ccggcggaga tcatcgttat ccatcgaggg cagatcgtca tggactagag aataggcatg
     1201 caccagttcc accgcactgg ccggcccatc gagcgcacgt ccctcgacac cgataacata
     1261 cccggttgca taaaccaggc tcgggcgcac ccgtttacct tgacccagca cggcatagcg
     1321 catcgcctcg tgcaagcgcc tgggctgtac cgtttccaga ggcaaccagc ggtcgagcgc
     1381 ctgttctaca cggcattgaa attcctggat taactgagcg atagacatgg tggtttagtc
     1441 gttttttctt tcctcttccg ggcctagtgg tgatccctca tttccttcca gatcgggggg
     1501 atcgaaggtt tcaagccttc cctctttctc caacaagatc ttaacctttt gctcggcctc
     1561 cgcgagggcc ttctggcaga gccgggtgag cccaatgccg cgttcaaagt atttaagcga
     1621 ctcttcgaga ctgagattac ccgtctccat cttttcaacg agcgcctcca actcccttaa
     1681 cgatcgctca aaatcaatag cagcggattt ccgggccacc gttggattcc taagcgcttg
     1741 aggctttggg ccgca
//
LOCUS       DASQSL010001720         1317 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_192202, whole genome shotgun sequence.
ACCESSION   DASQSL010001720 DASQSL010000000
VERSION     DASQSL010001720.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192202"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(127..891)
                     /locus_tag="VE844_17455"
     CDS             complement(127..891)
                     /locus_tag="VE844_17455"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011985889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HZC03071.1"
                     /translation="MFPYHDENETQRPAIVTGTVIGLNVLSWFVIQGAGTTVSLAASV
                     CNLGLIAGELTGSLPPGTRFPMGEGLVCVTDPGPQVSHLLTHMFLHGSWMHLLGNMWF
                     LWLFGNNVEDSMGHMRFLVFYLLCGLAAAAGQILTGPDSPIPMVGASGAISGVMGAYL
                     VLYPNVRVYTLVPLGFFLTSIALPAWVMLGYWFLIQFVSGLVSFAGEAGGGVAFWAHV
                     GGFVAGVVLVKLFVRSDYVAKHRAHHWRPRRVMSGW"
BASE COUNT          320 a          363 c          370 g          264 t
ORIGIN      
        1 cacacagctc ccatagagtg cccgagcggc tgacgacagg cctgggagcc gtcgctgaaa
       61 ttgagcgacg gcggttccgc taaagcagta acggagtatt acctaggctg gcggactccg
      121 ccggattcac cagccgctca tgacgcggcg gggacgccag tggtgcgcgc gatgtttggc
      181 aacgtagtcc gatcgcacga atagcttcac gagcaccaca cccgctacga agccgccgac
      241 gtgagcccag aaggcgactc cgccgcccgc ttcgcctgca aaagacacaa gcccactgac
      301 aaactgtatg agaaaccaat agcccagcat cacccatgcc ggcagagcta tcgatgtgag
      361 aaagaaaccg agcggcacca gagtgtagac gcgcacgttt ggatatagca cgagatacgc
      421 gcccataact ccgctgatcg ctcccgatgc gccgaccata ggaatcggtg agtctggacc
      481 ggtcagaatc tgtccggccg ccgcggctag gccgcataac agatagaaca ctagaaagcg
      541 catgtgcccc atggaatcct cgacgttgtt gccgaaaagc cacaagaacc acatgtttcc
      601 caagaggtgc atccaggatc catggaggaa catatgcgtt aagaggtgcg aaacctgagg
      661 gccgggatcg gtgacgcaga ccaatccctc gcccatggga aaacgagttc ccggcggaag
      721 cgagccggtt aactctccgg cgatgagccc gaggttacaa acagaagcgg ctagtgaaac
      781 cgtggtgccg gcaccttgta tgacgaacca actgaggacg ttgaggccga tgaccgtccc
      841 ggtaacgatg gctgggcgct gggtctcgtt ctcgtcgtga tatggaaaca tgtgggctct
      901 ccttagttgc tattttaaac taccggacga ccagtcttag atttaattaa acccgccggc
      961 tttcaggaac gcaaggtcgt tattctacat cgggtgagac agtgaggagt tcggcttgac
     1021 atcgaggacc tcggaagtcc tggtgagtgt gacgcgggtc ctgcgttttt tctgattttt
     1081 ggcaggcata gatacgtatt tgtttgggat taattggtat tgataggtta ataatgtgtt
     1141 tacttgggtc aatctataat gggcacccct ttcaaaaaac ttcatccctc gactcgaaac
     1201 tggacacaaa tgcacttgct cactgccccg catacctctg gaccatcttc gcgatagtgc
     1261 cccggtgcca gctagcgtaa tctcgtgagt acaggccctt gacgagcagc cggacag
//
LOCUS       DASQSL010001721         2352 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_117499, whole genome shotgun sequence.
ACCESSION   DASQSL010001721 DASQSL010000000
VERSION     DASQSL010001721.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2352
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117499"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(116..>2352)
                     /locus_tag="VE844_17460"
     CDS             complement(116..>2352)
                     /locus_tag="VE844_17460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020506467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HZC03072.1"
                     /translation="HGEALYIRDEEPGTFWSLMPGPVPQAVPYEVRHGFGYSRYRHVS
                     QGLEQDALVFVPRQDPIKITWLRLINRTAVIRHLSLFSYQRLVLGVLPEDSAEHVVTG
                     FDEASGAMLAWNPCAGEFANGVTFAAAVMSADTGAIHYTGDRTAFIGRSGSPARPAAL
                     CHATALDGRTGADLDPCMALQVPVILPPGAILECAFVFGEREGLGQVRALIEGYRLPG
                     AIARAFDEVRHFWRQTVSMVQVKSPSPALDLMVNGWLLYQTLSCRLWGRSALYQSGGA
                     FGFRDQLQDAAALVYARPELTRAQILLHAAQQFVEGDVLHWWHPPLSRGIRTRFSDDL
                     LWLPYVTAFYVQTTGDRSLLDEQVRFLSARPLALGEDEAYLLPEDSGGSATIYEHCCR
                     ALDRSLTQGPHGLPLMGTGDWNDGMNRVGREGRGESVWLGFFLYHILGDFIPLSEQRG
                     DRERINRYRDYRMGLLTALNQAGWDGGWYRRAYYDDGTPLGSRLSDECRIDALAQAWA
                     VISKAAPPERARQAMDAVEQHLISVEEGHIRLLTPPFDTTPHDPGYIKGYVPGVRENG
                     GQYTHAALWVVQAMAELGRNHRAANLLELLSPVNHARTPEEVAVYQVEPYVIAADVYG
                     VHPHIGKGGWTWYTGSAGWMYRVALESIFGLKWVNGDRLLLKPCIPDGWPEFQLRYRL
                     PGGATCYDIRVRNPQGKARTVVAATCDGAPVTVEDGLVCIPLLKDGTIHQICVILGEH
                     QDED"
BASE COUNT          519 a          706 c          684 g          443 t
ORIGIN      
        1 caaggccgcg ttaagcaatg agctccgatc taacgtgttg tttccacaat gaagattacg
       61 cgcttgccct ggctgatcct gatctagcga gcgtatggca gggtagagga ttggtctaat
      121 cctcatcctg atgttccccc aatatgacac agatctgatg aatagtgccg tctttgagga
      181 gaggtataca caccaaaccg tcttcaacag tgaccggcgc cccgtcacag gtagcagcta
      241 ccactgtgcg ggccttaccc tgggggttac gcaccctaat gtcataacag gttgccccac
      301 ccgggagccg ataacgcaac tgaaactcag gccagccgtc agggatgcac ggtttgagca
      361 acaacctatc cccgttcacc catttaaggc caaatatcga ttccagggcc acccgataca
      421 tccaacccgc agagccagta taccaggtcc atccaccctt ccctatgtgc gggtgaaccc
      481 catagacatc ggcagcaata acatagggct ccacctgata aaccgccact tcctcgggtg
      541 tccgggcatg attcaccggg cttaacagct cgagcaagtt ggccgcccga tggttccggc
      601 ctaactctgc catagcctgc actacccaaa gcgccgcatg ggtatattgg ccaccgttct
      661 cgcgcacgcc cggcacgtag cctttgatgt agccagggtc atggggggtg gtatcgaagg
      721 gcggggttaa taggcggatg tgaccttcct ctaccgagat caaatgttgc tctacggcat
      781 ccatagcctg cctagcacgt tcaggtggcg cggctttgga gatcactgcc caggcttggg
      841 ccagggcgtc gattctgcat tcatcggaaa gccttgagcc gagcggcgtt ccatcgtcgt
      901 agtaagcgcg ccggtaccag ccgccatccc aacctgcctg gttcagggcc gtcaaaaggc
      961 ccatccggta gtcccggtag cgattgattc gctctcgatc gccgcgttgt tcgctgagcg
     1021 ggataaagtc acccaggata tggtataaga agaagcccag ccacacgctc tcgcctcggc
     1081 cctcacgccc tacccggttc ataccgtcat tccaatcgcc ggtgcccatg aggggcagac
     1141 cgtgggggcc ttgcgtgagt gaacggtcga gggcgcgaca acagtgttcg taaatcgttg
     1201 cggatccgcc cgagtcctcg ggtaaaaggt aggcctcatc ctcgccgagt gcaagtggcc
     1261 gggcactgag gaaacgcacc tgctcgtcga gaaggctgcg atctccggtg gtttgtacat
     1321 agaaggcagt cacatagggt aaccacagga gatcatcgga gaagcgcgtg cggatcccgc
     1381 gagagagcgg cggatgccac cagtgtaata catcgccctc tacaaactgc tgggcggcat
     1441 gtaacaggat ctgggcccgt gtgagctcag gcctggcata cacgagggcg gcggcatcct
     1501 ggagttgatc gcggaagcca aacgcaccgc ccgactgata cagggccgaa cggccccaaa
     1561 ggcggcagct taaggtttga tagagaagcc agccatttac catgagatcg agggccggtg
     1621 agggtgattt tacctgcacc attgacacgg tctgccgcca aaaatggcgc acttcatcga
     1681 aggctcgagc gatcgcgcca gggagccggt agccttcaat caaagcgcgg acctgtccta
     1741 gaccctccct ctccccaaac acaaaggcac actctaagat ggcgcctggc ggcaggatca
     1801 cgggcacctg caaggccatg cagggatcga gatcggcacc ggttcggcca tcgagggcag
     1861 ttgcgtggca tagcgccgcc ggtcttgcag ggctgccgga tctgccgata aaggcggtgc
     1921 ggtcgccggt gtaatggata gctcccgtgt cggcggacat gacggcagcg gcgaatgtga
     1981 cgccattggc aaattccccg gcacaagggt tccaagcaag catggcccct gaagcctcat
     2041 caaagccagt gaccacgtgc tctgcgctat cttctggcaa caccccgagc accaggcgtt
     2101 gatagctaaa gagcgacagg tggcgtatca ccgcggtccg gttgatcagc cgcaaccagg
     2161 tgatcttgat aggatcttgc cggggcacga agacgagtgc gtcctgttcc aatccctgac
     2221 tcacatgccg gtaacggctg taaccgaacc catgacgcac ctcatagggg acggcctggg
     2281 gcacgggacc gggcataagg gaccagaagg tccctggctc ttcatcccga atatacagtg
     2341 cctcgccgtg ag
//
LOCUS       DASQSL010001722         1014 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_92376, whole genome shotgun sequence.
ACCESSION   DASQSL010001722 DASQSL010000000
VERSION     DASQSL010001722.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92376"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(185..>1014)
                     /locus_tag="VE844_17465"
     CDS             complement(185..>1014)
                     /locus_tag="VE844_17465"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03073.1"
                     /translation="ILLFRGQVIPFGIRLYVKKAQCAALGLPFRKTTELAAQLIRELQ
                     VPAGVQVLVLFDAYYLCHTVVKACREQKFHFASTLKSNRNPLKPGWKLKAGRYGRNLF
                     RRPRTETLVITKPHGSARYRFVDAGWLTVGHLGLLHVVFSRKGTAKKILGLVINAPEL
                     SAAQLIQTYDRCWTIEQWVQDAKQLLGLGQYQNRSYRAAVIHLHLVCFASALLTHLRI
                     VRDGAQGHRTHCKAADLSTATAQDQLRRLLWEDLITYLKEERHEHPVIEELERLRVA"
BASE COUNT          204 a          293 c          308 g          209 t
ORIGIN      
        1 agtagccaga cttgttctct ctgaacaacg acccaacctc tgagagctcc acacgaaaag
       61 agccttccca ggctgccacc gcatgtccgt cgtgtagtgt tgcacagctg cctcgtctga
      121 tctgacggtc cctgattgga agttctcatt cttttttact catgttgact gacttttgcc
      181 cggctcaggc gacgcgaagt cgctccagtt cttcgatcac agggtgctca tggcgctcct
      241 ccttcagata ggtgatgagg tcctcccaga gcagcctgcg gagctggtcc tgagccgtag
      301 cggtcgaaag gtcagcagcc ttgcaatgtg tccggtggcc ttgtgcaccg tcgcgcacga
      361 tgcgcaggtg ggtcaggagg gcagaggcga aacacaccag atgcaggtgg atcactgccg
      421 ctctatacga gcgattctgg tactggccga gccccagcag ctgcttggcg tcttgcaccc
      481 actgttcgat ggtccagcac cggtcgtacg tctggatcag ttgggcagcc gagagctccg
      541 gggcattgat gaccagcccg aggatcttct tggccgtccc tttccgcgag aagactacat
      601 ggaggaggcc caggtggccg accgtgagcc agccggcatc gacaaagcgg taccgggcgc
      661 tgccgtgggg cttcgtgatg acgagggtct cagtgcgggg ccgtcgaaag agattgcgcc
      721 catagcgccc cgccttgagc ttccagccgg gcttcaaggg gttgcgattg cttttgagcg
      781 tggaggcaaa atgaaacttc tgctcccgac aggccttcac aaccgtatgg cacagataat
      841 aagcatcaaa gaggaccaga acctggacgc ctgcagggac ctggagttcc cggatgagtt
      901 gcgccgccaa ttcggtggtt ttccggaagg ggagccccaa ggcagcacac tgggcttttt
      961 tgacatacag ccggatgcca aacgggatga cctgccctcg gaagagcaaa atgc
//
LOCUS       DASQSL010001723         1053 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_26800, whole genome shotgun sequence.
ACCESSION   DASQSL010001723 DASQSL010000000
VERSION     DASQSL010001723.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26800"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            762..>1053
                     /locus_tag="VE844_17470"
     CDS             762..>1053
                     /locus_tag="VE844_17470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03074.1"
                     /translation="MPRGSSGFRRLAAIVTQRCPRCLQGQVFATLFHMHVQCPLCGLP
                     FEREPGYFTGAMYLSYGVAIIATAPVWLIMVWLGRSLGEVLLVIAPLFVAASP"
BASE COUNT          232 a          273 c          305 g          243 t
ORIGIN      
        1 atgaaacaag taccctcgct cgggcacacc gaggacctcc tggattcgag ggcgtatccg
       61 tgtcgaccgc gagaagcgtg agaaactcgt cctcagtgag atagtctcgg gtacgctcgt
      121 gggcatcgac aggaaccgtc attcccacac tttttacctt acgccgcaat ttcgatgctc
      181 tcccttcgtc gtaagttgtt ggaacaagga accacagatg caagtgcttt ctacgaaaca
      241 caccttctgt ggagagtgag gggcgctatt gtagcgcgtt gggaagctgg agatcaatcc
      301 ctgagaggga aaaagaagaa atcgtagaag agatgtataa ccaaccggaa ttgcaagggt
      361 tacgtcatta tcaattaatg taagcagaga cggatgtttg tgagttcgtt ctcagtattg
      421 tgagcacatt ctcagctagt atgagcagag agggacggat attctcagct aatctgagct
      481 gaaaaacgcg atgttatcaa gcagagccct cgatgttctc aatcagctac aggtaggtta
      541 ttgactgtgc gtcgcgtcag gcattattac gtcttcgtcg tcacggcgcc ccgcgagcgc
      601 tgagaatggg cagggggtaa aactgcctga aaaccttgtt aatattgcgc catcaaagcg
      661 cgtcacgaca tcctgggtca tcggcacttt tggtgattca gagtggagtg agccacagag
      721 gaattgccgg ggcctgaagg aacggtcgaa gggaggtccc catgccgcgc ggttccagcg
      781 gtttcaggcg cctcgccgcc atcgtcacac agcggtgtcc ccgctgcctg caaggtcagg
      841 tgtttgccac cctgttccac atgcacgtgc agtgtcccct atgtgggctg cccttcgaac
      901 gcgaacctgg ctatttcaca ggggccatgt atctcagcta tggcgtggcg atcatcgcca
      961 ccgcgcccgt gtggctcata atggtgtggc tcgggaggtc tctcggggag gtgctgctgg
     1021 tgatcgctcc cctcttcgtc gcggcgtccc ctg
//
LOCUS       DASQSL010001724         1045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_68049, whole genome shotgun sequence.
ACCESSION   DASQSL010001724 DASQSL010000000
VERSION     DASQSL010001724.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68049"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..799
                     /locus_tag="VE844_17475"
     CDS             <1..799
                     /locus_tag="VE844_17475"
                     /inference="COORDINATES: protein motif:HMM:NF012402.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HZC03075.1"
                     /translation="VQEIGSMGQIPIRTLPCRVAKRQQLSHDVMGLWLKLPRTERLQF
                     LAGQYVDILHKDGSRRSFSLANSPYDDEFLELHIRYYPGGKFAHYVFTELQPNELLRI
                     RGPLGNFVLNQASQAPMILVAGGTGFAPIKGIVQHTLIERLTRPIHLYWGVRARRDLY
                     MDELARMWAETYSHIRYTPVFSEPLPEDSREVRRDFVHQAVLEDFADLSGYEVYVSGP
                     PVMVEAVRTHLLARGLAADKLYSDAFEFAALPNYTSFSHGTGRNGIP"
     gene            complement(767..>1045)
                     /locus_tag="VE844_17480"
     CDS             complement(767..>1045)
                     /locus_tag="VE844_17480"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZC03076.1"
                     /translation="EEEAHLELLGIAPDYRRHGIGRSLVSWLEGSALTAGISIVRLEL
                     RANNTGALHFYQRLGYRPIRRVRGYYQGREPAIEMARDLWYAISTGAM"
BASE COUNT          214 a          298 c          285 g          248 t
ORIGIN      
        1 ggttcaagag attggatcta tgggccagat ccctattagg acgcttcctt gccgtgtcgc
       61 caaaaggcaa caattgagcc atgatgtcat gggactgtgg cttaagctgc cccgtactga
      121 acgcctgcag tttcttgctg gccaatatgt ggacatcctg cacaaagatg gcagccggcg
      181 ttctttctcg ttggccaatt cgccttatga cgatgaattt ctggaattac acatccgtta
      241 ctatccgggg ggcaaatttg cccattatgt attcaccgaa ctgcaaccga atgaactgct
      301 tcggatccgg ggtcccctgg gcaactttgt gctcaatcaa gcttctcaag caccgatgat
      361 cttggtggcg ggcggcacgg ggtttgcgcc gatcaagggt attgttcaac acaccttgat
      421 agagcgcctc acacgtccga ttcacctcta ttggggcgtg cgcgcacgcc gcgacctcta
      481 tatggacgaa ctggcaagaa tgtgggcgga aacttattcc catatccgct atacgccggt
      541 cttttctgag cccttacctg aggacagccg ggaagtccgc agggatttcg tgcatcaagc
      601 ggtgctcgag gattttgcgg atctgtccgg ttatgaggtg tacgtcagcg gtccacccgt
      661 gatggtagag gctgtccgaa cccatctctt ggcgcggggg cttgcggccg ataaactcta
      721 ctccgacgcc tttgaatttg cggcgcttcc gaattatact tctttttcac atggcaccgg
      781 tagaaatggc ataccataag tcacgcgcca tctcgatagc gggctctcgt ccttggtaat
      841 agcccctcac tcgccggatc ggccgatacc caaggcgttg atagaagtgc agcgcgcccg
      901 tgttattggc acgcaattcc agccgtacaa tagagatccc cgccgtgagc gcggatccct
      961 cgagccagga gaccaggctg cggccgatcc catgacgccg gtagtccggc gcgatcccga
     1021 gaagctcgag atgcgcttcc tcctc
//
LOCUS       DASQSL010001725         1128 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_68065, whole genome shotgun sequence.
ACCESSION   DASQSL010001725 DASQSL010000000
VERSION     DASQSL010001725.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68065"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            35..577
                     /locus_tag="VE844_17485"
     CDS             35..577
                     /locus_tag="VE844_17485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014680031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HZC03077.1"
                     /translation="MTPAEIHARVKERFGEPVLEFEESAPNPSIKLAPETVAEVGQYL
                     KNEPELQFNYLMCLSGVDYGSGKNLGVVYHLQSMTLRHQIVLKVELPRESPSLPSVAL
                     LWRTADWHEREAYDLFGIRFEGHPDLRRIFLPDDWEGHPLRKDYVVQEFYQDIRVPFP
                     DLDPDRGTHVFGLPGGGKQS"
     gene            574..>1128
                     /locus_tag="VE844_17490"
     CDS             574..>1128
                     /locus_tag="VE844_17490"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014560488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit I"
                     /protein_id="HZC03078.1"
                     /translation="MTHALKDYFANIWGGIWTVLVGMRLTFWHLFTPSVTLQYPDEKW
                     ELPVGARAQLFNNFDDCIGCGFCAKVCPVDCIYIDTVKTGPGEDLGKTTTGNPKRLHV
                     LRFDIDMAKCCYCNLCTIPCPTECLQMTPKYENSVYNRANLLYHYSTYSPADAARIRA
                     EAEKREAEEAEKRKAAAAAKAAAAK"
BASE COUNT          236 a          319 c          347 g          226 t
ORIGIN      
        1 acgctagagc gctgccagga gggaaggagc cgtcgtgaca ccggcagaga tccacgcacg
       61 tgtgaaggag cgcttcggag aaccagtgct ggagttcgag gagtcggccc cgaatccgtc
      121 catcaagctg gccccggaga cggttgccga ggttggacag tatctgaaaa acgagcctga
      181 gctccagttt aactacctca tgtgcctgag tggcgtggac tacggctcgg ggaaaaacct
      241 cggcgtggtg tatcatctgc agtccatgac cctcaggcat cagatcgtgc tcaaggtgga
      301 actgccgcgt gagagtccaa gccttccctc agtagcccta ctttggcgca cagctgactg
      361 gcacgagcgg gaggcgtacg acctcttcgg tattcggttc gaggggcatc cggacctgcg
      421 acggatcttt ctccccgatg attgggaggg tcatccgctc cgcaaggatt atgtggttca
      481 agagttttat caagatatcc gggtgccgtt cccggacctc gaccccgatc gtggcaccca
      541 tgtctttggc ttaccaggtg gggggaagca atcgtgacac atgcgctgaa ggattatttc
      601 gccaatatat gggggggcat ttggacggtg ttggtcggca tgcgcctgac gttctggcat
      661 ctctttacgc cgtctgtcac cttgcaatac cccgacgaaa agtgggagct gccggtcggc
      721 gcccgagccc agttgttcaa taacttcgac gactgtatcg gctgcggctt ttgcgctaag
      781 gtgtgcccgg tggactgcat ctacatcgat acggtgaaga ccggtcctgg cgaggatctg
      841 ggcaagacga cgactggcaa cccgaagcgc ctccacgtcc tgcgcttcga tatcgacatg
      901 gccaagtgct gctactgcaa cctgtgcacg atcccatgtc cgacggaatg tttgcagatg
      961 acgcccaagt atgaaaactc ggtgtacaac cgggccaacc tgctctacca ctattcgacg
     1021 tattcccctg ccgatgcggc gcggatccgc gcggaggcgg aaaagcgcga ggcagaagag
     1081 gcggaaaaac gcaaggcggc agccgccgct aaagccgccg ctgctaag
//
LOCUS       DASQSL010001726         1418 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_92388, whole genome shotgun sequence.
ACCESSION   DASQSL010001726 DASQSL010000000
VERSION     DASQSL010001726.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1418
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92388"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            4..177
                     /locus_tag="VE844_17495"
     CDS             4..177
                     /locus_tag="VE844_17495"
                     /inference="COORDINATES: protein motif:HMM:NF026954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HpcH/HpaI aldolase/citrate lyase family protein"
                     /protein_id="HZC03079.1"
                     /translation="MESFYSVRSQELDMARSLLAPGAAAVFRMHDTMCEVATHTGWAE
                     ATLRRAEIYGIGG"
     gene            complement(195..1187)
                     /locus_tag="VE844_17500"
     CDS             complement(195..1187)
                     /locus_tag="VE844_17500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HZC03080.1"
                     /translation="MLLRRDDAAGELRLICPHPNPHFLGFLVAHEGVIEHSDLSGEAY
                     IDYCLEFVKTQGIDVFIPGKEAALITANTEQFAALGTQVLTVADPATLALLQDKGRFY
                     QAVDRAIVAPPDFIRINDISGFRRAYAELRSRYAVLCIKPAISVYAQGFKVIDEQHSA
                     LDLLLEGTQYRITLPQLERCLAEAERFKDMLVMEYLGGHEFSIDCVGDQGRLIYAIAR
                     KKPLVAGQGQLLDDDPEIQRIARQLTRAYGLNGIYNIQLKEDAEGRLRLLEINSRISG
                     GIAMSCLSGINLLYVAIRGFVHGFARIERITPRIGVRVGEAWEAVELPCSENFC"
BASE COUNT          340 a          395 c          373 g          310 t
ORIGIN      
        1 atcatcgaat cgttctatag tgtgcggtcg caggaattgg atatggcgcg ctcgttattg
       61 gcgccgggcg ctgccgccgt atttcgtatg catgatacca tgtgcgaggt cgctacccat
      121 accggctggg cggaagcaac cttgcgacgg gcggagatct atggtattgg gggctaaagc
      181 gcaagcccaa gggcttagca gaagttttcc gagcaaggca actcaaccgc ctcccacgcc
      241 tcgcccaccc gcacccctat ccggggcgta attctctcaa tccgtgcaaa gccatgcaca
      301 aaaccgcgaa tggcaacgta aagtagattg atgccggata ggcaactcat ggcgatacca
      361 cccgatatgc gcgaattgat ctccaataat cttaatctgc cctctgcgtc ttctttaagc
      421 tgaatattgt agatcccgtt gaggccatag gcgcgagtca attgcctggc gatacgctga
      481 atttcaggat catcatcaag cagttgaccc tgccccgcca ccagcggttt tttgcgggct
      541 atcgcataga tcaatcggcc ctgatcaccc acacaatcga tactgaactc atgcccgccc
      601 agatattcca tgaccagcat atccttgaac cgctccgcct ccgccagaca tcgctccagc
      661 tggggcagcg tgatgcgata ctgggtgccc tccaggagaa gatcgagcgc actgtgttgc
      721 tcatcgatta ctttgaaccc ttgggcatag acggaaatag caggcttgat acacagcact
      781 gcataacgtg atcgaagctc agcgtatgcc cggcgaaagc cagagatatc attgatgcgg
      841 ataaaatcgg gcggcgccac gatggcgcga tcaactgcct ggtaaaatcg gcctttatcc
      901 tgtaatagcg ctagtgttgc ggggtcggca accgtcaata cctgtgtgcc cagcgcggca
      961 aactgctcag tattcgccgt gatcagcgct gcctctttgc ctggaatgaa tacgtcgata
     1021 ccctgcgtct tgacaaattc aaggcaatag tcgatatagg cttccccact cagatcggag
     1081 tgctcaatga caccttcatg ggccaccaga aaaccaagga aatggggatt ggggtggggg
     1141 caaatgaggc ggagttcacc cgccgcatca tcccgccgaa gtagcatcaa agcggcatga
     1201 atagatgaaa aggtcctatt gaaccagacg ttaatcacga tcagcgattg cttttatgac
     1261 cagcgacttc actggtcgcg ctgttgacca aggagccaaa gaacccctgt cctgcccatc
     1321 tggctcgtag acagttcttt aaatgagggc agaatggatg gatctcgtct gcacctagcg
     1381 cgatgggcgt cgctgccgac ttcgcttggc gcggaata
//
LOCUS       DASQSL010001727         1566 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_162099, whole genome shotgun sequence.
ACCESSION   DASQSL010001727 DASQSL010000000
VERSION     DASQSL010001727.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1566
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162099"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(149..1342)
                     /locus_tag="VE844_17505"
     CDS             complement(149..1342)
                     /locus_tag="VE844_17505"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HZC03081.1"
                     /translation="MAQIPKPELLYLSGLFHDIAKGGGSDHSELGAQFASEFCLQHGL
                     GPHDTRLVAWLVKHHLLMSMTSQRRDISDPEVINAFAQQIGNRVRLDYLYLLTVADIC
                     GTNPSLWNSWKDALLTELYDNTLRALRRGVENPLEREEWIAETRGEALALLCRADLNK
                     GGIIALWKDLGDDYFLRHWPDEIAWHTKAILNATEGDLPLVLVREQTRLGGTAIFIYA
                     QDQDHIFAAATRTLEQLGLTILDARIITSAQGYTLDTYIVLEAATNEVIRSAERVEEI
                     VTLLKAKLNSETPISPQVNRRQPRQLKHFRIPTEISFSDDSANVRTIMEVVGTDRPGF
                     LAQVAMALQLCGVRLQNAKIATFGERVEDIFYITDIDGRPIRDTLTLECLHTTLTQAL
                     SPLMP"
BASE COUNT          327 a          454 c          470 g          315 t
ORIGIN      
        1 aggggcatac cgtaagactc gatatggtgt cacgaaaggg tcagggatga cccttcatcc
       61 cagcctacgc gctctcatcc gagaatacga gaagggctgg cgtcaagcag cgccttggtt
      121 atttctatca gcgccttgac cgctcatctc acggcatcaa cggtgagagc gcctgggtaa
      181 gggtggtatg caggcattca agtgtgaggg tgtcccggat cggccggcca tcgatgtcgg
      241 taatataaaa gatatcttcg acccgctcgc caaaggtagc gatcttggcg ttttgcaggc
      301 gtacgccaca aagctggagg gccatcgcca cttgcgcgag aaatcccggc cggtcggtgc
      361 ccaccacctc catgatcgtg cgcacgttgg cgctatcgtc gctgaacgag atctccgtag
      421 gtatgcggaa gtgtttaagc tgccggggct ggcggcggtt cacctggggg gagatcgggg
      481 tttcgctgtt gagcttggct tttaacaggg tgacgatctc ctcgacccgt tcagccgatc
      541 ggatcacctc attggtcgcc gcctcgagca cgatgtaggt gtcgagcgta tagccctgcg
      601 ccgaggtgat aatgcgcgca tcgagaatgg tcaaacccaa ctgctccagc gttcgggtag
      661 cggcggcgaa gatatggtcc tggtcctggg cgtagatgaa gatcgcggtg ccgcccaggc
      721 gcgtctgctc gcggactaat accagcggca gatccccctc ggttgcattg agaatagcct
      781 tggtatgcca ggcgatctcg tcgggccagt ggcgcaggaa gtaatcgtct cccagatcct
      841 tccacagcgc gatgataccg cctttattga gatccgcccg gcaaagcagc gccagggcct
      901 cacccctcgt ctccgcgatc cattcctcgc gctcgagcgg attctccaca ccccggcgca
      961 gcgcccttaa ggtattatcg tagagctcgg tcaacagcgc atccttccag ctattccaaa
     1021 gcgacgggtt ggtgccgcag atgtcggcga ccgtgagcag atacagataa tccagccgaa
     1081 cccggttgcc gatctgctgc gcaaacgcat tgatcacctc gggatcggag atatctcggc
     1141 gctgagaggt catggacatg agcagatgat gtttgaccag ccaagcgacg agcctcgtgt
     1201 catgggggcc gagcccatgc tgtaagcaga attcactagc gaactgggcc ccgagctctg
     1261 agtgatcgct cccgccgccc ttggcgatat cgtggaatag acccgacaga tagagcagct
     1321 caggtttggg gatctgggcc ataaggcgga tatacagggg cagcgtccct tcccgctcgg
     1381 gacaccccag ctactgcatg tttttcacca caaataaggt atgcacatcg accgtataga
     1441 catggaagag gtcaaactgc atcagtcccg cgaccgcacc aaagaccggc agataggcat
     1501 cgagcacgcc gtagcggtgc attcgctgga gcgcatcgct acacccttgg ggttggcgca
     1561 ggatct
//
LOCUS       DASQSL010001728         1320 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_92391, whole genome shotgun sequence.
ACCESSION   DASQSL010001728 DASQSL010000000
VERSION     DASQSL010001728.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1320)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1320)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1320
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92391"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            158..1162
                     /locus_tag="VE844_17510"
     CDS             158..1162
                     /locus_tag="VE844_17510"
                     /inference="COORDINATES: protein motif:HMM:NF033547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HZC03082.1"
                     /translation="MSTLSYVHQLFSPEQCQAYIHALRWKDRPLHCPRCQSQDVRPWG
                     TYHYRPGLKRYWCHGCRRTFNDLTHTLLARSQRSLPHWIVATFLLCLSCSSRRIARES
                     GVHIRTSYRWCWWLRNAALSYEMDHQLAGTVEADELYHTAGNKGQAQQGGKKSLGRRP
                     RGRRKKCEPGRGHDDKDRPAIIAWVSRQGPVVVQAVKDFTVSTVQQAADLAVEAGSRL
                     YTDSASSYRALKGYVHEFVNHTKKEYARGEIHENRAECLFSLLKPFLRVFRGISKFNL
                     PGYLGFFQFLRNFCQRNAFEQAEMILYAALDPAIASRARKGEFVTCFDHFDLLQTAIN
                     "
BASE COUNT          277 a          362 c          383 g          298 t
ORIGIN      
        1 agcgcattga tgacggtagt gctatacagg taatgctatt gtagaaactc ctcgctcaat
       61 ttatcagggt ttgtagcggc gtaaaaactc gatccagaga tgagaatctc tccatgcgtt
      121 cgagacgtgc tctcgcaacc agaggagatt ctcatccatg tcgaccctct cgtatgtcca
      181 ccaactcttc agccccgaac aatgccaagc ctacatccat gcgttgcggt ggaaagatcg
      241 cccgctccac tgtccccggt gccagagcca agacgttcgt ccttggggca cgtaccacta
      301 tcggccaggg ttgaaacgtt actggtgcca cggctgtcgg cgcaccttca atgacctcac
      361 ccacacgctg ttggcccgga gccagcggtc tctcccgcac tggattgtgg cgacctttct
      421 cctgtgcctc tcgtgttcgt cccgtcgtat cgccagggag tcgggggttc atatccgcac
      481 cagctatcgt tggtgctggt ggttacgcaa tgcggctctg tcctatgaga tggatcacca
      541 gttggcgggc acggttgaag cggatgaact ctatcacacg gctggcaaca aaggccaagc
      601 acaacaaggc gggaagaagt cgttggggcg ccggccgcgt ggtcgccgca agaagtgcga
      661 gcctggccgt ggccatgatg ataaagaccg gccggcgatc atcgcgtggg tcagccgcca
      721 ggggcccgtc gtggtgcagg ccgtgaagga ttttaccgtc agcacggtgc agcaagccgc
      781 tgacctcgcc gtcgaagcgg ggagtcggct ctatacggac tccgccagca gctatcgggc
      841 gttgaaaggc tatgtacatg agttcgtcaa tcatacgaag aaggaatatg cgcgcgggga
      901 gatccatgag aatcgggcag aatgcttgtt ttccttgctg aaacccttcc tgcgggtgtt
      961 tcgtggcatc agcaagttca acttgccggg gtacttgggc ttctttcagt tcctgcggaa
     1021 cttttgtcaa cggaatgcat tcgagcaggc cgagatgatc ttatatgcgg cactagaccc
     1081 agctattgcc agccgagcca gaaagggaga gttcgttacg tgctttgacc acttcgacct
     1141 cctacaaaca gcgataaatt gagcgaagtt gctttctcat acggattgtc cgctccctca
     1201 tggggctcgg cttctgggag gaagacctcc cggatcagtt tgtcataggc ttgagcggct
     1261 ttcgcgcggg ggttaaacga gaaaatatcc tgcttttgaa agtgggcatc ccgcaggtca
//
LOCUS       DASQSL010001729         1608 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_79926, whole genome shotgun sequence.
ACCESSION   DASQSL010001729 DASQSL010000000
VERSION     DASQSL010001729.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1608
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79926"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..1585)
                     /gene="acs"
                     /locus_tag="VE844_17515"
                     /pseudo
     CDS             complement(1..1585)
                     /gene="acs"
                     /locus_tag="VE844_17515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007195240.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003987 - acetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019427 - acetyl-CoA biosynthetic process
                     from acetate [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
BASE COUNT          330 a          494 c          455 g          329 t
ORIGIN      
        1 cagccgtccc gaaccgatga cccgctacat tgatggtatc atctatcctg ccggttatcc
       61 aataataacc atcctgatct cggcgcgcac catcgccggt gaagtaatag ccgggatagc
      121 gtctgaaata ggtatcgata aaacgtggat gatcgccata gacggtgcgc atctacccgg
      181 gccagggtcg ggtcaagacc agtgatcctt cggctggccc ttcaagcagc cgtccctgct
      241 cgtctacaat gcccggtgcc actccaaaga agggccaggc cgctgaaccc ggtttaagcc
      301 gtgtcgctcc cggcagcggt gtgatcagta tgccaccggt ctcggtttgc caccaggtat
      361 cgacgatcgg gcaacgaccc tcaccgacga cgtggtagta ccattcccag gcctcgggat
      421 tgatcggctc gccgacggtg ccgaggatgc ggagactcgt gcgtttagtg cgcttgacaa
      481 agctatcgcc ttgcgccatg agggtacgca gggcggttgg agcggtatag aagatgtcga
      541 caccatattt atcgatgatc tcccagaatc ggccggcatc cggataggtg ggtacccctt
      601 cgaaaaggag cgtagtggcg ccattgcata acggcccgta gacgctgtat gaatggcctg
      661 tgatccagcc cacatccgcc gtacaccaat agatcccagc ctcatggtag tcgaacacat
      721 agcggtgggt gatggcagca tacaccaaat aaccgccgct cgtatgcagc acccccttgg
      781 gtttgccggt ggaacctgag gtgtaaagga taaacagcgg atcctccgct tccatcgtct
      841 cagggagaca gtccgccgag gcttctgcca gggcctcgtg ataccagtga tcgcggcccg
      901 cctgccaggg gatagctccg cccgtgcgct gtaccactaa gacggtatca atcttggggc
      961 aggtagcgag cgcttcatcg acctgagctt tgagcggcac ccgcttgccg ccgcgcagcc
     1021 cctcatcggc ggtgatcacc gcccggcaat cggcatccac gatccggtcc ttgagggccc
     1081 cggacgagaa tccgccaaac accaccgagt ggatggcgcc gatccgcgcg caggcaagca
     1141 tggccactac ggtctccggg atcatcggca tatagatcgc cacccggtcg ccttttttta
     1201 ctccatatcc cttgagcaca ttggcgcagc ggcagaccgc ttgatacagt tcgcgataag
     1261 tgagtttgtt agagactgcc ggatcatccc cttcccacag gatcgccacc tgctcgccgc
     1321 ggtttgcaag gtgcctgtcc aagcagttat aggcgacgtt gagctggccg ccttcgaacc
     1381 agcggatcag ggctgtgtga taatcccact caagcacccg gtcccagcgt ttgaaccagg
     1441 tgacaaaccg ttctgcctgt tctgcccaga agccctcggg gtcggccagc gagcgcgcat
     1501 acaccgcttg gtagtgggct tcatcgatat gcgccgcttt ggcaatagcc acggggactt
     1561 cataaagttt ctcttgcgcc gtcatggaca gtctcagttt tattgact
//
LOCUS       DASQSL010001730         1055 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_117527, whole genome shotgun sequence.
ACCESSION   DASQSL010001730 DASQSL010000000
VERSION     DASQSL010001730.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117527"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            27..>1055
                     /locus_tag="VE844_17520"
     CDS             27..>1055
                     /locus_tag="VE844_17520"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZC03083.1"
                     /translation="MTDLRAAQEQLVQTEKLRALGELTAVVTHELRDPLATIVSFAQL
                     LARIAPAQGRMKAQLEHTSEAASHCHHIVNSLYNYTWKQHPRKVYADLNEICENMLSS
                     LAYQVNLSNIVVHRRLATNISRMMLDPNQLQHAFINIALNAYQAMISARSGGEFVIET
                     RQGTGVIHLIFQDNGPGIAEEDQGRIFEPFFSTKPCGTGLGLSLASAIIEGHGGKITV
                     SSILGEGTTFHLELPVIEPTQLQEEQLFGTSAPPDRARVLVIDDDEENCALLQEIVSH
                     LGHEVEAVFSVEEALGKMIEQEYDVLIADLGMPYLTGEPLYQQIKALRPELAERTIFM
                     SGDSISDDY"
BASE COUNT          249 a          270 c          310 g          226 t
ORIGIN      
        1 aagcgaacaa acggctgcag cggtccttga cagatctacg agcggcgcag gagcagttgg
       61 tccaaacaga gaagcttcgc gcgctggggg agctcactgc cgtcgtgaca cacgagctgc
      121 gcgacccgct tgccaccatt gtcagcttcg cccagttgtt ggccaggata gcgcccgcgc
      181 aggggcggat gaaagcgcaa ttggaacaca ccagcgaggc ggcctcccat tgccatcata
      241 ttgtcaacag cctttacaat tatacatgga agcagcatcc gaggaaggtg tacgccgatt
      301 tgaatgaaat ctgtgagaac atgcttagtt cgttggctta tcaggtcaac ctcagcaata
      361 ttgtggtgca ccggcggtta gcgacgaaca tatccagaat gatgttagat cccaaccagc
      421 tacagcacgc cttcatcaac atcgcgctga atgcttacca agctatgatc agtgcgcgga
      481 gcgggggcga atttgtcata gagactcggc aaggtacggg cgtcatccat ctgatctttc
      541 aggacaatgg ccctggtatt gccgaggagg atcagggcag gatttttgag cccttcttta
      601 gcactaagcc ttgtgggacc ggcctcggat tgagtctggc gagtgcgatt atcgaggggc
      661 atgggggaaa gattactgtc agcagcatcc tgggtgaggg cacgaccttt cacctcgagt
      721 tgccggtcat tgagcctaca cagctccagg aggaacagct gttcgggaca tcggcgccgc
      781 ccgacagagc gcgggtgctg gtgattgatg atgatgagga aaattgcgcg ctgctgcaag
      841 aaatcgtcag ccatctcgga catgaggttg aagcggtctt ttccgtggag gaggctctgg
      901 gcaagatgat cgagcaagaa tacgacgtgc tcatcgccga tctcggaatg ccttatctga
      961 ctggcgagcc tctctatcaa cagattaaag cgctccggcc agagttggca gaacgcacca
     1021 tcttcatgtc tggcgattcc attagtgacg attac
//
LOCUS       DASQSL010001731         1371 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_192317, whole genome shotgun sequence.
ACCESSION   DASQSL010001731 DASQSL010000000
VERSION     DASQSL010001731.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1371
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192317"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            946..>1371
                     /locus_tag="VE844_17525"
     CDS             946..>1371
                     /locus_tag="VE844_17525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03084.1"
                     /translation="MDEARAAYLKIYIWVLAALATALCVSWIYWYRFEVDPRLIIGTA
                     ILAGFSLLGDVFAVRVNERLAISTSAIALVIAVAALGPTWAALAALPSALFVGRGDLL
                     RTVYEVGHSVTTVYLAGMAFSFASGPLLIDDSASSATVFY"
BASE COUNT          295 a          322 c          446 g          308 t
ORIGIN      
        1 tctttatcct gtttttcctc gtcctcgctt cggcaagaga cgtccaggag cgatgagcag
       61 cttctaaccg aaaaatgctg gcccccctcg ctcctttgct ccctttcctg taacccggag
      121 atctagtagc attgggtccg acgtgagaag cctcgagaag ggggtggaag aatgatccag
      181 gacggtatcg gggtctggta acccgctttc cgaaaagaga cgcttgatag atccgggctg
      241 gggtaaatag ccttatagcc tggaggactt ggcaggtcga gccaaggaag caaggtgtcc
      301 ataacgatct gagttggaga ggtggtgacg aagatgctca ggagggcctg gtagtcgtac
      361 cggacgccgt accgggagca aggagcccgg ctgataacag taccggaagc gaggaggtga
      421 cgagaatgct caggagagct tggtagacca catcagggga gtcccatgcc gggataggta
      481 ggaggtgggg atccaatgcg gcggggttgg taagcgacga cgcgcaagcc ttatgcggag
      541 cctgagagga gggaggtgaa aagcctgatg cggaggggtt ggtagctcga accggcggca
      601 gtgtgggtcg agaagatgag cgtgcagaag agaggaggtg gagataaatg cggaggggtt
      661 ggtagcagac gaccaccaaa ccttgtgcag ggcaatacaa gtagctctgg acaggatcat
      721 accgactgga tggttctctg tgcttttcgt gaggtttcat tccgatcagc atggttacat
      781 ccgatgaatt gacggtaaat caggaacgac gtatacgttt gagagagtct gggatatatg
      841 ccaggcggcc atttttgatg aaccagctgc gtgatcacct tgtgcataac ataggtctta
      901 tgtaagaatt cgggcgtaaa acgatccctg cgccggatgg agagcatgga cgaggctcgc
      961 gcggcttatc tgaaaatcta catttgggtg ttggcggctc tcgccacggc gctttgtgtc
     1021 tcttggatat attggtatag gtttgaggtc gatccacgcc tgataatagg aacagcaatt
     1081 ctcgctggtt tctctctgtt gggcgacgtt ttcgccgtac gggtaaacga gcggcttgcc
     1141 atcagcacca gcgccatcgc gctcgtgata gcggtcgcgg cgttgggacc cacgtgggcc
     1201 gcactggcgg ctctcccttc cgccctgttc gttggaaggg gcgacttgct acggacggtc
     1261 tatgaggtag gccatagcgt cacgaccgtc tacctggcag gcatggcctt ttcgttcgcg
     1321 tccggacctt tgctgatcga cgactcggcg tcttcggcta ccgtctttta c
//
LOCUS       DASQSL010001732         1464 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_79942, whole genome shotgun sequence.
ACCESSION   DASQSL010001732 DASQSL010000000
VERSION     DASQSL010001732.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1464)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1464)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1464
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79942"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..954)
                     /locus_tag="VE844_17530"
     CDS             complement(139..954)
                     /locus_tag="VE844_17530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03085.1"
                     /translation="MLTRCGLPLPTYILADEKHSRCLAENVYLPTIVSGRVIWHLEYT
                     EEASAAAFTQCYQEFQRAAFQHEPSFRVRGVLTDGFDSTTKSMHTLFPGARLGNCLRH
                     ALTKLPKKLVAIASPVRRALRTEFHTLLYRARQRKGLRVFALGQRLRHFADHVAVTAG
                     VVNGERVRRWFQEKKAGWYAVLADSQMPVTSTPLDQAHNAIDRKLFMMKGFHHPKGSQ
                     QAFLRGLAHLYNLVPYQRRAQHAGQCGVEVEGDTVPTRDWFLNLQNLTPGGLR"
     gene            complement(905..>1464)
                     /locus_tag="VE844_17535"
     CDS             complement(905..>1464)
                     /locus_tag="VE844_17535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03086.1"
                     /translation="INMEDSFWMHDTLLFEGSFKYYGNKKQEIRGKIHIAGERYDFHN
                     FGHSLERSYLKSRKGERVYLLMHPYVVQPNIVMNIVVQPKHYADAGTILGKTIDSRVS
                     GLRQEDIGSAQAWYYPEDKILVLWECFFQEYACDVPLLKDVNMANLWTGFEKWLLTRY
                     PETERIVTPHADPVWATAAHVHPGG"
BASE COUNT          296 a          395 c          420 g          353 t
ORIGIN      
        1 tgtcaagttg aatctgcgcg atgtggaggc gctgttcaat ggtgtcattc gggctctggc
       61 caggatgggg gtgttgaccg ccaagatcac tgggattgtc cacattccat cggatttagt
      121 ggtagtgtgt gtccccgctc atcgaaggcc tccgggcgtg aggttttgga gattgaggaa
      181 ccaatctcgt gtggggactg tatcgccttc cacctccacc ccacactgcc cagcatgttg
      241 ggcacgacgt tggtagggca ccaggttgta cagatgtgcg agccctcgca ggaacgcctg
      301 ttggctgcct ttgggatgat ggaatccctt catcatgaag agcttccggt cgatggcgtt
      361 gtgggcttga tccagtgggg tgctggtcac aggcatctgc gagtctgcaa gcaccgcata
      421 ccagcccgcc ttcttctcct ggaaccagcg ccggacgcgc tcgccgttga ctaccccagc
      481 cgtaacggcg acgtgatcgg caaaatggcg cagccgttga cccagggcaa acacccgcaa
      541 gcccttccgc tggcgcgccc ggtacagcag cgtgtggaac tccgtacgaa gtgcccgacg
      601 gacaggggac gcgatggcca cgagtttctt cgggagcttg gtgagtgcgt ggcgcaggca
      661 gttgcccaag cgtgctcccg ggaagagtgt gtgcatactc ttggtggtgc tgtcaaagcc
      721 atcggtgagc acccctcgga cccgaaagga cggctcatgc tggaatgccg cacgttgaaa
      781 ctcctgatag cactgggtaa aagctgcggc actggcctcc tcggtgtact ccagatgcca
      841 gatcacgcgg ccactgacga tggtaggaag gtatacgttc tccgccagac agcggctgtg
      901 tttttcatcc gccaggatgt acgtgggcag cggtagccca caccgggtca gcatggggag
      961 tgacgatccg ttccgtttcc ggatatcggg tgagaagcca tttttcaaac cctgtccaga
     1021 ggttggccat gttcacgtcc ttcagaagcg gcacgtcaca agcatattcc tggaaaaagc
     1081 attcccacag cactaatatt ttatcctctg gataatacca agcttgcgcg ctgccgatgt
     1141 cttcttgtcg caatcccgaa acccggctat cgatggtttt gccgagaatc gttcctgcgt
     1201 cggcgtaatg tttcggttgg acgacaatat tcatgacgat gttcggctgc acaacgtagg
     1261 ggtgcattaa caggtaaacg cgctcgcctt tccggctttt gaggtaactt ctttcgaggc
     1321 tatggccaaa gttgtggaag tcgtaccgct ctccagctat gtgaatctta ccacgtattt
     1381 cttgtttctt atttccgtag tatttaaaac tcccttcaaa tagtaaggtg tcgtgcatcc
     1441 agaatgaatc ttccatgttt ataa
//
LOCUS       DASQSL010001733         1171 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_162128, whole genome shotgun sequence.
ACCESSION   DASQSL010001733 DASQSL010000000
VERSION     DASQSL010001733.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1171
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162128"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..978
                     /locus_tag="VE844_17540"
     CDS             <1..978
                     /locus_tag="VE844_17540"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03087.1"
                     /translation="RSGKWDAQAVMDGMAEKVLRSLPPAADGKLYLIGDTTHKPKRGK
                     KHPLGHMTRQSKSSPYVFGFGMVVLVASWNGYRIPIKVATIDPERKGHQNILFRQMLK
                     DFEPPSWVREIVVLGDAGYAANPTLKLIEKLGWTYVFAMPRTRKFTNGKYLRDLVQHL
                     PKSQYRRRATYKPDGRRQDYWVFMRHAELHQLGDVMIVLSKKRRNFGPKRVKIIVTNL
                     LDVSASAVISQYAIRWAVELTIKELKGGLHLGRMQVSQDADRVERSVVLPVCAYLLLL
                     HLYGRDQAVNKGWSLFQLKQRFTEALIQDQVNRVERKWQRKWRRIKDAA"
BASE COUNT          289 a          298 c          331 g          253 t
ORIGIN      
        1 cgatcaggca aatgggatgc tcaagccgtc atggatggga tggcagagaa ggtgttgcgg
       61 tctctgccac cagccgccga tggcaagctc tacctcattg gggacacgac tcacaagccc
      121 aagcggggca agaaacatcc cttgggacac atgacgcgcc aaagcaagtc gtcgccttat
      181 gtctttggct ttggcatggt agtgctggtg gcgagttgga acggatatcg cattccaatc
      241 aaggttgcca caatcgatcc cgagcgcaag gggcatcaaa atatcttgtt tcgtcagatg
      301 ctcaaagact ttgagccccc gtcgtgggtg cgtgaaatcg tggtgctcgg tgatgcgggc
      361 tatgcggcca atccgactct caaactgatc gagaagttgg gatggacgta cgtattcgcc
      421 atgccacgca cccgaaagtt caccaatggc aagtatctac gcgatctggt ccaacacctg
      481 cccaagtcac agtatcgtcg tcgagccact tacaaaccgg atggtcgacg acaggattat
      541 tgggtcttta tgcgccacgc cgagctgcat cagctgggcg atgtcatgat tgtactctcc
      601 aaaaaacggc gaaacttcgg gccgaagcga gtcaagatca tcgtgaccaa tctcctcgat
      661 gtcagtgcga gcgcagttat cagccaatat gccatcagat gggcggtcga gctcactata
      721 aaagagctca aagggggact tcatttgggt cgtatgcagg tgagtcaaga cgcggatcgg
      781 gtcgagcgat ccgttgtctt gccggtgtgc gcttacctct tattgctcca cctctacggg
      841 cgcgatcaag ctgtgaacaa gggctggagc ctgtttcagc ttaaacagcg attcaccgag
      901 gcgctcatac aggaccaggt caatcgagtt gagcgaaaat ggcagcgcaa gtggcgccga
      961 atcaaggacg cggcctaaaa agagggcgaa accccgccaa ttctgagttt atagtatacg
     1021 acagcgctcg aactcgttga tctgtatgta ctttcatggg gcatctcggg gagagtcgcg
     1081 tgaaacctgg gtgagacgac aaaacggaaa agtcaggcaa tcatatttgt tctgcgaagc
     1141 taatatatac ccgcctggtc taatcgcctg g
//
LOCUS       DASQSL010001734         1676 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_36553, whole genome shotgun sequence.
ACCESSION   DASQSL010001734 DASQSL010000000
VERSION     DASQSL010001734.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1676
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36553"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..670)
                     /gene="menA"
                     /locus_tag="VE844_17545"
     CDS             complement(<1..670)
                     /gene="menA"
                     /locus_tag="VE844_17545"
                     /inference="COORDINATES: protein motif:HMM:TIGR00751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046428 - 1,4-dihydroxy-2-naphthoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     octaprenyltransferase"
                     /protein_id="HZC03088.1"
                     /translation="MAQYLTSWLWATRPFTLPASVVPVLVGTALAVRDGSFSGGLFGL
                     TLTGSLLVQVGTNLVDEYTDHLKGGSRGKLLAPYKVIALGLLAPQEVRAGAVVSFGVA
                     AIIGLYLVAVTSWPLLLVCVASLVVAYSYSAGPRPLGNIGLGLPLVFVFMGLLMVMAT
                     YYVQTGTVTGAALLASLPVACLVTAILVVNDLRDIEEDRQAGKVTPVSQWGPGFGLGL
                     FLILI"
     gene            complement(679..1479)
                     /gene="menB"
                     /locus_tag="VE844_17550"
     CDS             complement(679..1479)
                     /gene="menB"
                     /locus_tag="VE844_17550"
                     /EC_number="4.1.3.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020491020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008935 - 1,4-dihydroxy-2-naphthoyl-CoA
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA synthase"
                     /protein_id="HZC03089.1"
                     /translation="MTHAFQDILYKKGDGIAWITINRPQVLNAFRPLTIDEMIEAFLD
                     AWHDDEIGVGVLSGAERNFCSGGDQKIRGEGGYNDESGMPRLHVRELHRLIREIPKPV
                     VAMVDGYCIGGGHVLHILCDLTIASSRARFGQTGPKVGSFDAGFGSIQLARMVGQKRA
                     REIWYLCRQYTAQEAYDMGLVNTVVPAEHLEAETTAWCREMLAKSPTALRFLKYSFNA
                     DTDHVYGIQAIAHGATSLFYTMEESKEGRRAFVEKRQPDFSKYRKHPW"
BASE COUNT          375 a          533 c          447 g          321 t
ORIGIN      
        1 caattaatat cagaaagagc cccagcccaa accccggccc ccattggctc accggtgtca
       61 ctttacccgc ctgacggtct tcttcgatat cacgcaagtc attgacgact aaaatggccg
      121 tgaccagaca ggcaaccgga agcgatgcca gcagtgcggc ccctgtcacc gtgccagtct
      181 gcacgtaata ggtggccatc accatcagta atcccataaa gacgaatacc agcggcaacc
      241 caaggccaat gttgccgagt ggccgtgggc ccgcgctata gctatacgcc accaccaggc
      301 ttgccacaca gacgagcagg agcggccagc tggtgaccgc aaccagatac agcccgatga
      361 tcgcggctac cccaaagctg acgacggcgc ctgcacggac ttcctgaggg gcgagcaacc
      421 ccagggcaat taccttgtat ggcgccagca atttgccgcg actcccaccc ttaagatgat
      481 cggtgtactc gtccaccaga ttggtcccga cctggaccag gagcgagcct gtcagcgtca
      541 gcccaaacag cccgccgctg aagctgccgt cgcgcacggc cagggccgtt cctacgagga
      601 ctggtaccac cgaggcaggc agcgtaaagg ggcgggtggc ccaaagccag gatgtgaggt
      661 actgtgccat gccgcgccct accagggatg tttgcggtat ttggagaagt cgggctgacg
      721 cttctccacg aaggcccgcc gaccttcttt agattcttcc atggtataga acagtgaggt
      781 cgcgccatga gcaatcgcct gaatgccgta gacgtggtcg gtatccgcgt taaatgagta
      841 tttcaaaaac cgcaatgcgg tcgggctctt ggccagcatt tcacggcacc acgccgtggt
      901 ctctgcctct aagtgctccg ctggcaccac cgtgttgacc aatcccatgt cataggcttc
      961 ctgcgccgtg tactggcggc acaggtacca gatctcacgg gctcgcttct ggcctaccat
     1021 acgcgccaat tggatagatc caaaaccggc gtcgaagctg cccactttcg ggcccgtttg
     1081 cccgaacctg gcacggctgg aagcgatcgt caagtcacac aggatgtgca gcacgtggcc
     1141 gccaccaatg cagtagccat cgaccatcgc caccaccggc ttagggatct cgcggatcaa
     1201 tcggtgcagc tcccgcacgt gcaggcgcgg catgccactt tcatcgttgt agccgccctc
     1261 accgcggatc ttctgatcgc ctcccgagca aaaattacgc tcggccccgc tgagcactcc
     1321 taccccgatc tcgtcatcgt gccaggcatc caggaaggcc tcgatcatct cgtcaatggt
     1381 caggggacgg aaggcattca gcacctgcgg gcggttgatc gtgatccagg cgatcccatc
     1441 ccctttctta tagagaatat cttgaaatgc atgcgtcatg gtcactctcc atcttcagct
     1501 ctgctctgat cgaagacctt gctgtgcgac cacctgaaag actcgcgctt gcagcaacgt
     1561 gatacacatc ggctctcaac aagcatgcaa tggatatcga ggtggtacgg ccagagcaga
     1621 aaactcttct ttggcaggaa tcagcatgcg aaccgtaaca tagtcagtag cgaaaa
//
LOCUS       DASQSL010001735         1668 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_26883, whole genome shotgun sequence.
ACCESSION   DASQSL010001735 DASQSL010000000
VERSION     DASQSL010001735.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1668
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26883"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1563
                     /locus_tag="VE844_17555"
     CDS             <1..1563
                     /locus_tag="VE844_17555"
                     /inference="COORDINATES: protein motif:HMM:NF033559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC03090.1"
                     /translation="VKHRTIANLNQCSPKEIEAIRLALRHKEDLTALGSLPHSLEVRQ
                     GPSVGTVGVVYDVARQLGIDQALGPSQEGRLALWQVSARVIDQGSRLSAVRLAMAHGA
                     CDVLGLERFNEEDLYQNLDWLCAHQAEIEDRLFRSRATDSSSSLFLYDVTSSYLEGEQ
                     NALAAFGYNRDGKRGKPQLIIGLLCDGEGRPLSIELFAGNTQDPKTFISQIKKVAKRF
                     GGKEVTFVGDRGMIKSQQIEALGDQQFHYITAITKPQIEGLLKNGVLQIGLFDETLAE
                     VSTEQGIRYVLRRNPERVEQIARTREEKYQTLAQAVAAHNHYLGAHPRARVEVALRTL
                     ESRSQKLRIAEWVKLCPEGREILLTKDPQTLAEIATLDGCYVLKTDLSEQTAAKAVVH
                     DRYKDLALVEWAFRESKTVSLEMRPIYVRRESRTRGHALVVMLAYLIIQELARRWQPL
                     DLTVQEGLNQLATLCMIEIQVKDQAPYHQIPTPRDTVQHLLDAAGVHLPKVLPSRGVV
                     VTTKRKLPDRRK"
BASE COUNT          396 a          485 c          456 g          331 t
ORIGIN      
        1 gtcaaacacc gtacgatcgc caatctgaat cagtgctccc caaaggagat tgaagctatc
       61 cggttggcct tgcgccataa agaggacctc acggcgctgg ggagtctccc ccactccctg
      121 gaggtgcgcc aaggcccctc ggtaggcact gtcggggtgg tctacgacgt ggcccggcaa
      181 ctgggcattg accaagcctt aggcccaagt caagagggac gcttagcctt atggcaagtc
      241 agtgcgcgtg tcattgacca gggctcccgc ctctcggctg tgcgcctggc catggctcat
      301 ggagcctgtg atgtattagg gttggagcgg tttaatgaag aggacctcta ccagaacctc
      361 gattggttat gtgcccatca agccgagatc gaagaccgct tgtttcggtc ccgggcgacc
      421 gactcctcca gtagtctatt tctctacgat gtcaccagca gctacctcga aggcgagcag
      481 aatgcgctgg ccgccttcgg ctataaccgg gatggcaaac ggggtaagcc tcagctcatc
      541 attgggcttt tatgtgatgg agagggccgg ccgctttcca tcgagctctt tgctggcaat
      601 acccaagacc ccaagacctt catctcccag atcaaaaagg ttgccaagcg ctttgggggc
      661 aaggaagtga cctttgtcgg tgaccggggg atgatcaaga gtcaacaaat tgaggccctg
      721 ggagaccaac agtttcacta catcaccgcg attaccaagc ctcaaatcga aggcctgttg
      781 aaaaacggtg tcctgcaaat cggcttattt gatgaaaccc tcgcggaggt cagcaccgag
      841 caaggcatcc gctatgtcct gcgccgtaat ccagaacggg tagagcaaat cgctagaact
      901 cgggaagaga agtatcaaac cctggctcag gccgtagcgg cccacaacca ctatctcggc
      961 gcgcatcccc gcgcccgcgt ggaggtggct ttgcgcaccc tggagagccg cagccagaag
     1021 ctgcgtatcg ccgagtgggt taagctctgc cccgaaggac gagaaattct cctcaccaag
     1081 gatccccaga ccctggctga gatcgccaca ctggatggct gctatgtctt gaaaaccgac
     1141 ctctccgagc aaacggccgc caaagcggtg gtccatgacc gctataagga cctggcgctg
     1201 gtcgaatggg ccttccgcga gagtaagacc gtctctttgg aaatgcggcc tatctatgtg
     1261 cgtagggaaa gccgtacccg tggccatgcc ctggtggtca tgctggccta tttaatcatc
     1321 caggaactgg ccagacggtg gcagcccttg gacctcaccg tgcaagaagg actcaaccag
     1381 ttagctacac tgtgtatgat cgagatccaa gtgaaggacc aagcccccta ccaccaaatc
     1441 ccaactccgc gcgataccgt tcagcatttg ctggatgcag ccggtgtcca tttacctaaa
     1501 gttctcccca gccgaggtgt cgttgtaacc actaaaagaa aactgccaga ccgaagaaaa
     1561 taaaaataaa ttcaatagct tatgcgacaa tcccacacgc acagtggagg gaacatccgc
     1621 tacagcccag ggggtttttc caccaaagtg catctgcgcg ccgagggc
//
LOCUS       DASQSL010001736         1026 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_117582, whole genome shotgun sequence.
ACCESSION   DASQSL010001736 DASQSL010000000
VERSION     DASQSL010001736.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117582"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(213..896)
                     /locus_tag="VE844_17560"
     CDS             complement(213..896)
                     /locus_tag="VE844_17560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011979499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
                     /protein_id="HZC03091.1"
                     /translation="MAVSFKGAHFPKDIVLMGVRWYVAYPLSTRQVEELMEERGVTVD
                     HSTINRWVITYSPPLEEAFHRRKRPVWVSWRLDETYIRVKGQWYYLYRAVDKEGQTID
                     FLLTAQRDKDAALRFLKKAIRRHGVPETITIDGSEANAAAIRTYNQEHGTAIAIRQVK
                     YLNNILEQDHRAVKRVTRPMLGFKSFDAAQSTLVGIELMHRLKKKQLLVEAGDEGLTA
                     AEQFYALAA"
BASE COUNT          198 a          326 c          281 g          221 t
ORIGIN      
        1 cgcgcctccc ggcagactcc cgagcaccag accggccaga agactcagga gccaacgacc
       61 cagcgctccc gaagacggcg tctccctgcg tgtggtatca gtcatcgaca ttcccccgtg
      121 tgtcacgacg cccccggagg ccactagcgg gttccgtcgc aaattttcgt gtgtaggcga
      181 tttgggatga gtcgacccgg tcggtagagc cattaagcag cgagagcgta gaactgttcg
      241 gccgccgtga ggccctcgtc tccagcctcg accagcagct gctttttctt gagcctgtgc
      301 atgagttcaa taccaaccaa agtcgactgc gcggcatcaa acgacttgaa ccccagcatt
      361 ggacgtgtca cccgctttac tgctctatgg tcctgttcca ggatattgtt caaatatttc
      421 acctggcgga tcgcgatcgc ggtgccgtgc tcctggttgt aggtccgaat ggcggcggca
      481 ttggcctcgc tcccatcaat ggtgatcgtc tccgggaccc catgacggcg gatggccttt
      541 ttcagaaacc gcagggcggc gtccttgtcc cgctgcgccg taagcagaaa gtcaatcgtc
      601 tggccctcct tatccacggc gcgatagagg tagtaccact ggcctttgac ccggatgtac
      661 gtctcgtcca gtcgccaact cacccacacg ggccgcttgc ggcggtgaaa cgcctcctcc
      721 agtggcgggc tgtatgtgat gacccaccgg ttgatggtgg agtgatccac ggtgacccca
      781 cgttcctcca tgagctcttc gacctggcgc gtgcttaacg gatacgccac ataccagcgg
      841 acgcccatga gaacgatgtc cttggggaaa tgcgcaccct tgaagctgac cgccattgtc
      901 tctctccctt gtctgttcac tgtggttcgc agagggagat catacctcaa tgggcctcaa
      961 aggaaaattg cgacagatcc gccaaacctc ctcagtaatc aagccgcttc acgacctgtg
     1021 tctgcg
//
LOCUS       DASQSL010001737         1484 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_26905, whole genome shotgun sequence.
ACCESSION   DASQSL010001737 DASQSL010000000
VERSION     DASQSL010001737.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1484
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26905"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1484
                     /locus_tag="VE844_17565"
     CDS             <1..>1484
                     /locus_tag="VE844_17565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009049076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03092.1"
                     /translation="LKFSRSNRWNYLGLVNEPCFEKATWPREDRYGLWLDVRVKDCPP
                     DPFENESKYPGVKIGARGKNIPVGSYYGYATGIVGVRLFPNPDFDEAAEKRWDPKKYY
                     TDPSYYNDKNLVRPYRVGMSCGFCHVGPNPTNPPQDPENPKWENLNSNPGAQYFWIDR
                     IFTWEADASSFPYQLFRTSRPGALDTSLVSSDYINNPRTMNAVYSLGARLHAALRLGE
                     EKLAGGGLDSKQLNDYVPADSPLAQFYKKPDSVWTTRVLKDGADSVGALGALNRVFIN
                     IGLFSEEWLEHFKPLIGGKKITPIPIKVARNNSAYWQANENQTPNLALFFLATAKPDY
                     LKNAPGGEAYLTADAATLTRGKAAFGERCARCHSSKLPEMAYTFFPNNGCVGKDYLKC
                     WNAYWDWTKTEEFKKEMQQIVQADDFLKDNFLSTELRVPVTLLETNACSPLATNAIAG
                     NIWDNFSSQSYKDLPSVGTITVHHPVTGEPREYKMPASGRGYTRP"
BASE COUNT          348 a          425 c          414 g          297 t
ORIGIN      
        1 ctgaagttca gtcgcagtaa ccggtggaat tacctggggc tggttaatga gccctgcttc
       61 gagaaagcaa cctggccgcg ggaggaccga tacggcctgt ggctcgatgt gcgggtcaag
      121 gactgcccgc cggatccgtt cgagaacgag tcaaagtatc cgggggtaaa gatcggtgct
      181 cggggcaaaa atattccagt cggctcctac tatggctacg cgacgggtat cgtcggtgtg
      241 cgactgtttc ccaaccccga ctttgatgag gcagcggaaa agcgctggga tccaaaaaag
      301 tactataccg atccaagcta ttataacgac aagaatctcg tgagacctta tcgggtaggc
      361 atgtcctgtg gcttctgcca cgtcggaccg aatccgacca acccgcccca agatcccgaa
      421 aatcccaagt gggagaacct caattcgaac ccaggtgccc agtacttctg gattgatcga
      481 attttcactt gggaggcgga tgcgtcgagc tttccttacc agctcttccg tacctcccgt
      541 cccggggccc tggatacgtc cttagtctca agcgactaca tcaataaccc gcgcacgatg
      601 aacgcggtct acagcctcgg agcgcgcttg catgccgccc tgagattagg tgaggaaaaa
      661 ctggcgggtg gcgggctcga cagcaagcag ctcaacgatt acgtgcctgc ggacagcccg
      721 ctcgcacagt tctataaaaa acccgactcg gtctggacga cgcgcgtcct caaggacggc
      781 gccgattcgg ttggggcatt gggcgccctg aaccgcgtat tcatcaacat cggactgttc
      841 agcgaagagt ggctggagca cttcaagcca ctgatcggtg gcaagaaaat aacccccatt
      901 ccaatcaagg ttgcgcgtaa caactcggct tattggcagg cgaacgaaaa ccagacaccg
      961 aatctggcac tgttcttcct tgccaccgcc aagcccgatt atctgaaaaa tgcgcctggc
     1021 ggtgaggctt atctgaccgc cgatgcggcg acattgactc gcggcaaggc tgcgttcggt
     1081 gagcgatgcg cccggtgtca ttcaagcaag cttccggaga tggcgtatac gttcttcccc
     1141 aacaatggct gtgtgggcaa ggattatctc aagtgctgga acgcctattg ggattggacc
     1201 aaaaccgaag agtttaaaaa ggagatgcaa cagattgtgc aggcggacga tttcctgaag
     1261 gataattttc tatcgaccga gttgcgggtg ccggtgaccc tgcttgaaac caatgcctgc
     1321 agcccgctcg ccaccaacgc catcgccggc aacatctggg acaacttttc gtcccagtcc
     1381 tacaaagatc tcccatcggt gggaacgatc acggtgcacc acccggtcac cggcgagccc
     1441 cgggagtaca agatgcccgc aagtggccgc ggttataccc gacc
//
LOCUS       DASQSL010001738         1294 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_79973, whole genome shotgun sequence.
ACCESSION   DASQSL010001738 DASQSL010000000
VERSION     DASQSL010001738.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1294
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79973"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(63..>1294)
                     /locus_tag="VE844_17570"
     CDS             complement(63..>1294)
                     /locus_tag="VE844_17570"
                     /inference="COORDINATES: protein motif:HMM:NF040081.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF6399 domain-containing protein"
                     /protein_id="HZC03093.1"
                     /translation="AAWEQEGIAHGEIRAVIGAVDETFLQRMMLVFMDLATGYLLMEQ
                     LAVDRSYETWFERANERLSTFGAEVLSLVSDRAKARIKLAHKGFGCPSIPDGFHVGCD
                     LAKGYSLILFGRLRQAKRELEQVKQRLEQWHTNPQADPSQIAENQAQVAACAASVHHW
                     QEVGSTWRPHLSNLSRIVHPWRLSDSKCQTSQEVEEPLQGELKAIETFVETHGLAVKK
                     ETLSKVQKQLGGISALIDCWWRTVRQDLAHLAMTPRWSQWAQEALLPMMYWQEQLRRT
                     RHPAQKAQIVIVLKALEEAFARHSCTRQLQAALLADWKGWAVDHAKAFQRASSAVEGR
                     NGYLAQMQHNHHGLPTRRYSVWTALHNFDGRAKDGTTPASRFFRGSFPDLFESVLSQI
                     DELPRPRQRRQALATSH"
BASE COUNT          260 a          411 c          342 g          281 t
ORIGIN      
        1 gtcgccattg gcgactcttc ccatttgcgg ggtatcaatt taagccggga caccctgttg
       61 tctcaatgac ttgtcgcaag ggcctgacgg cgttgcctgg gcctgggcaa ctcatcaatc
      121 tgtgacaata cgctttcaaa caaatcggga aacgaccctc tgaaaaaccg cgacgccggt
      181 gtcgttccgt ctttggcccg accatcaaag ttatgcagcg ccgtccacac tgaatagcga
      241 cgcgtaggta agccgtgatg gttatgctgc atctgcgcga gataaccgtt gcgtccctcg
      301 acggccgatg acgccctctg aaaggccttg gcatgatcca cggcccaccc tttccaatcc
      361 gccagcaacg ccgcttgaag ctggcgggtg catgaatgcc gcgcaaaggc ttcttcaagc
      421 gctttaagca cgatcacgat ctgagccttt tgcgccgggt ggcgcgtgcg acgaagctgt
      481 tcttgccagt acatcatggg cagcaacgcc tcttgagccc attggctcca cctcggcgtc
      541 atcgctaggt gcgccaagtc ttggcgcacc gttcgccacc aacaatcgat cagggctgag
      601 atgccgccaa gttgcttttg caccttgctc aaggtctctt ttttcaccgc cagcccgtgg
      661 gtctcaacaa acgtttcgat ggccttaagt tcgccttgca acggctcttc aacctcctgt
      721 gaggtctggc atttcgagtc cgaaagccgc caggggtgca cgatacgcga caaattggac
      781 aagtgtggtc gccaggtgct ccccacctct tgccagtgat ggaccgaggc ggcgcaggcc
      841 gctacctgag cctggttctc agcgatttgg ctagggtctg cctgggggtt cgtgtgccat
      901 tgctccaggc gctgcttgac ttgttccaac tcgcgtttgg cttgccgcag gcgaccgaag
      961 aggatcagcg aatagccctt ggccaggtca cagcccacat gaaatccatc tggaatactc
     1021 ggacagccaa accccttatg ggccagcttg atccgcgctt tggcgcggtc actcaccagg
     1081 gataacacct ccgcgccaaa cgtgctcaga cgctcattgg cgcgctcaaa ccaggtctca
     1141 taactgcgat ccaccgcaag ctgttccatc aacaaatagc ccgtggccaa atccatgaac
     1201 accagcatca tgcgctggag gaacgtctca tccaccgccc caatgacggc tcgtatctcg
     1261 ccatgggcga taccttcttg ctcccacgcc gcgg
//
LOCUS       DASQSL010001739         1220 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_92441, whole genome shotgun sequence.
ACCESSION   DASQSL010001739 DASQSL010000000
VERSION     DASQSL010001739.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1220
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92441"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..690
                     /locus_tag="VE844_17575"
     CDS             <1..690
                     /locus_tag="VE844_17575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HZC03094.1"
                     /translation="LWSKDRAGHRVLRGLPVGPPDYIPEGCPRCALPMPISTTCGHCL
                     EDPPPYERCIAPFRYAYPLDALIKAVKFRGQLGFTAQLGALLADTLADRLDILPECLI
                     PVPLHRLRLNERGYNQSLELARPLARQFKLPLNVKDCIRIRPTRPQTQLSATERRLNV
                     RGAFKVRHRLEFRHVALIDDVITTGHTVAELTSQLIHSGVVQVDVWALARAVTPSIRY
                     QDELPRVRSVQ"
     gene            complement(647..>1220)
                     /gene="gyrB"
                     /locus_tag="VE844_17580"
     CDS             complement(647..>1220)
                     /gene="gyrB"
                     /locus_tag="VE844_17580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013789134.1"
                     /note="negatively supercoils closed circular
                     double-stranded DNA; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA gyrase subunit B"
                     /protein_id="HZC03095.1"
                     /translation="LPPLEEESFRHKDRVEQWFRGFEEILNSRSSGRRYTIQVDWTSL
                     GFMGRVCTLIYGLESVEEFPQDFFASNEYKKLVLLSQQLSAGLPEGTYVQSGGRKQPI
                     TTLKQAFDKLLEAVRQGVQIQRYKGLGEMNPEQLWETTMNAETRSLLRVRIEDAVAAD
                     EIFTTLMGDQVEPRREFIERNALAVAHLDT"
BASE COUNT          259 a          369 c          303 g          289 t
ORIGIN      
        1 ctgtggagta aggatagagc aggacatcgg gttctgcgag gcttgccggt tggacctccc
       61 gactatatac ccgaggggtg cccccgctgc gccttaccta tgcctatatc cactacctgt
      121 ggtcattgcc tcgaggatcc cccaccttac gagcgctgta tcgctccatt tcgttatgct
      181 tatcccctgg atgccctgat caaggcggtt aagttcaggg gacagttggg atttactgcc
      241 cagctcggcg ccctgctggc agatacactc gcggatcgcc ttgacatact gcctgaatgc
      301 ctgatcccag tccccctcca ccgcctgcgc ttgaatgaac gcggctataa tcagtcgctt
      361 gagcttgcaa gaccgcttgc aaggcagttt aagcttccgc ttaacgttaa ggattgcata
      421 cgcatacgcc ctaccagacc gcaaacccag ctctccgcta cagaacgccg gctcaatgtt
      481 cgcggtgctt ttaaggtccg gcatcggctg gaattccggc atgtggcctt gatagacgat
      541 gtgatcacga ctggccacac agtggctgaa ttaacctccc aattgatcca tagcggtgta
      601 gtacaggtcg atgtctgggc gctggcacga gccgtaacgc cctcgatcag gtatcaagat
      661 gagctaccgc gagtgcgttc cgttcaataa actcgcgcct cggctcgacc tgatccccca
      721 tcaaggtggt aaagatctca tctgctgcca cggcatcctc gatccgtact cgcaacagac
      781 tccgcgtctc agcattcata gtggtctccc aaagctgctc ggggttcatt tcacctaagc
      841 ccttataacg ctggatctgc accccttgcc gcaccgcctc gagcaatttg tcgaatgcct
      901 gtttgagggt agtgatcggc tgcttacgcc cgccgctttg cacatacgtg ccttcaggca
      961 agcctgcgct caactgctga ctcaataaga ccagtttctt gtattcgttt gaggcaaaaa
     1021 aatcctgagg aaattcttca accgactcaa gtccatagat cagggtgcaa acgcgtccca
     1081 tgaaccctaa actggtccaa tcgacttgaa tggtataccg gcgtccgctg gaacggctat
     1141 tgaggatctc ctcgaagccg cgaaaccact gctcaaccct atctttgtgg cgaaagcttt
     1201 cttcctcgag cggggggagc
//
LOCUS       DASQSL010001740         2541 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_199597, whole genome shotgun sequence.
ACCESSION   DASQSL010001740 DASQSL010000000
VERSION     DASQSL010001740.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2541
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199597"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(267..611)
                     /locus_tag="VE844_17585"
     CDS             complement(267..611)
                     /locus_tag="VE844_17585"
                     /inference="COORDINATES: protein motif:HMM:NF042840.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6788 family protein"
                     /protein_id="HZC03096.1"
                     /translation="MKKPSRHRLRQRTQALRRAINTLDFIASGTLHTRTKVCGRPNCR
                     CAVDPNARHGPYHEWSRRHNQRLLHSVLTSEQAKLLTEAIANYRKIQQLLARWEQETA
                     KEILNPNGDADS"
     gene            656..2380
                     /locus_tag="VE844_17590"
     CDS             656..2380
                     /locus_tag="VE844_17590"
                     /inference="COORDINATES: protein motif:HMM:NF033559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC03097.1"
                     /translation="MRKSQVPPWQPEMFALSVERLGPLPLINHFLERLALEAHLERFV
                     PTPRRRTRLPYAKGLGILLRSLLVDREPLYRQYETVSTFSPQAFGLEGALVEAVSDDA
                     VGRALDHLFDADRAALLTEVIVSAVQGFDLKLDELHNDSTTVRFCGQYTQARARKLRG
                     KRAPFITYGYSKDHRPDLKQLLFILTTSEDGGIPVQFRCEQGNTNDARTHEHTWEALC
                     RVAGRVDFLYVADSKLCNRESMDYIHRRGGRFVCVMPRSRREDSEFREWLQTHEPTWT
                     PVWDRPNPRWRNGPRDRWWVFRYPLPSSEGWPVIWVYSALLAIRQERTRHERLVQAHQ
                     ALQALNIKLTGPRPRRRSRQEVQHRLEAILHKHKVASYMNVDLVEDEDHHFRQAKPGR
                     PGPNTRYVRKTRTFWRVQWHIDEHALDYDRKSDGMYPLLTNDRKLTDAQLLEAHKRQP
                     TIEKRFEQTKSVFEIAPVLLKNEGRVEALFFVYFLALLVQALIERELRRAMQRQAVDS
                     LPLYPEERTTQCPTTEQIFRLFSLMQRHLLKYKGETVHTFEPELTDLQQQVLTLLGVP
                     QTVYRTVT"
BASE COUNT          536 a          771 c          725 g          509 t
ORIGIN      
        1 gctgcagcgc accacacacc attaggcaca gcgacccgga gccatagcgg atcaccctca
       61 gccatatcgg tcttgccgat cttcgcattg agcaagaacc gaagtttgac gagcagccgg
      121 acagaaagtg tacataaggg gccataataa gcctcacctg attctgtagg gtagcgcaag
      181 atagcgatag aaagttgctc tagacctaca ttccgctctt ctcagtactg atttcttcac
      241 aattattctg ttgaagcaac aaaagcttaa ctgtcggcgt cgccgttggg gttgaggatc
      301 tcctttgcgg tttcctgctc ccagcgggca aggagttgct ggatctttcg gtaattggcg
      361 atcgcttcgg tgaggagttt ggcctgctct gaggtcaaga cactgtgaag gagacgctga
      421 ttgtgacggc ggctccactc gtggtaagga ccgtgacggg cgttggggtc tacggcgcag
      481 cgacaatttg gccgtccaca cactttcgtg cgcgtgtgca gggttccgga ggcgatgaag
      541 tccagggtgt tgatggcgcg gcgcaatgct tgggtacgct gacggagtcg gtggcggctg
      601 ggtttcttca ttggggcttg acattgcctc tatctggcaa ttatatagtc gccagatgcg
      661 taaaagtcaa gtccctccct ggcagcctga gatgttcgcg ctgagcgtcg agcgactggg
      721 acccttgccg ctcatcaacc actttcttga acgcttagcg cttgaagcac atctcgagcg
      781 tttcgtgccc accccccgtc gccgcacccg cttgccctat gccaagggat tggggatact
      841 gctgcgtagc ctcctggtgg accgcgaacc gctgtaccgc cagtacgaga cggtgagcac
      901 gttttcaccc caggcgtttg ggctggaggg cgcgctcgtg gaagcggtga gcgacgatgc
      961 ggtcggacgc gcgctcgatc acctcttcga tgccgaccgg gccgcgttac tgaccgaggt
     1021 gatcgtcagc gcggtgcagg ggttcgacct caagctcgat gagctgcaca acgattcgac
     1081 cacagtgcgc ttctgtggtc agtacactca ggcccgcgcc cgaaagcttc ggggcaagcg
     1141 tgcccccttt atcacctatg gctactcgaa agaccatcgc cccgacctca aacagctgct
     1201 ctttatcctc accaccagtg aggacggcgg catccccgtg caattccgtt gcgagcaggg
     1261 caacaccaac gacgcgcgca cccatgagca cacctgggag gcgttgtgtc gcgtggccgg
     1321 ccgcgtggat ttcctctatg tcgctgactc caagctctgt aatcgtgagt caatggacta
     1381 catccaccgc cgtggtgggc gtttcgtttg cgtcatgccg cgctcgcgcc gagaagacag
     1441 cgagttccga gagtggcttc agacccacga acccacctgg acaccggtgt gggaccggcc
     1501 caacccgcgc tggcgcaacg gaccgcgcga ccgctggtgg gtgtttcgct atcccttgcc
     1561 ttcaagcgag ggatggccgg tcatctgggt ctacagcgcg ctgctggcga ttcgccaaga
     1621 acgcacccgg cacgagcggc ttgtgcaggc gcaccaagcg ttgcaggcgt tgaacattaa
     1681 gctcacgggc cctcgcccca gacgacgctc gcgccaggag gtgcagcacc gactggaggc
     1741 gatcctccat aagcacaagg tcgcaagcta catgaacgtg gatctcgtcg aggacgaaga
     1801 ccaccacttc aggcaagcaa aaccgggtcg accaggaccg aacacgcgtt atgtacgcaa
     1861 aacccgcacc ttctggcgcg tccagtggca tatcgatgag cacgctctcg attacgatcg
     1921 gaagagcgat gggatgtacc ccttgctcac caatgaccgg aagctcaccg atgctcagct
     1981 ccttgaggcc cacaagcgcc agccgaccat cgagaagcgc ttcgagcaga ccaagagtgt
     2041 ctttgagatc gcccctgtcc tgctcaagaa cgaaggtcgt gtcgaggcgc ttttcttcgt
     2101 gtacttcttg gcgctgctcg tgcaggccct catcgagcgc gagctacgtc gtgcaatgca
     2161 gcgccaggcc gtggacagcc tccccctcta ccctgaagaa cgcacaacgc agtgcccaac
     2221 cactgaacag atcttccgcc tgttcagcct catgcaacga caccttctca agtacaaagg
     2281 agaaaccgtt cataccttcg aaccggaact caccgatctc caacaacagg tactcacgct
     2341 gctcggcgtc ccccagaccg tctaccgcac tgtcacctga taccctccga gcacgagcgg
     2401 aaattactga gaaatcgact tcaagaagag cggaatgtaa gaccggaggg tatcagcagc
     2461 gggatctaca atagagttta tgcacaaatt agcagcctta gcttgctgcc agcgcagggt
     2521 ttgagtgttg accaagccac a
//
LOCUS       DASQSL010001741         1005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_26932, whole genome shotgun sequence.
ACCESSION   DASQSL010001741 DASQSL010000000
VERSION     DASQSL010001741.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26932"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..728)
                     /gene="recF"
                     /locus_tag="VE844_17595"
     CDS             complement(<1..728)
                     /gene="recF"
                     /locus_tag="VE844_17595"
                     /inference="COORDINATES: protein motif:HMM:TIGR00611.1"
                     /note="All proteins in this family for which functions are
                     known are DNA-binding proteins that assist the
                     filamentation of RecA onto DNA for the initiation of
                     recombination or recombinational repair; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication and repair protein RecF"
                     /protein_id="HZC03098.1"
                     /translation="MRLLTLQARNFRNFERLELACAPRLNIFVGDNGQGKTNILESIY
                     VLGQLRSFRGVGRAELTRWGADVVSLRGTLAHPAHGAAVQLGMSWNGQRRILQVQGRE
                     INRTVDYLGHLNALVFAADSVQVIKGSPDGRRRLVDRALVSLQPTYLSLLQNHHMVLK
                     HRNRLLKSPKVDRASLEVWNSKFAQAGGALVQARAHYLQRLNGQLACLNALKLGSPTA
                     LQLCYQPALGPGDNDKGGGKEAHA"
     gene            complement(807..>1005)
                     /locus_tag="VE844_17600"
     CDS             complement(807..>1005)
                     /locus_tag="VE844_17600"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF014787.4"
                     /note="binds the polymerase to DNA and acts as a sliding
                     clamp; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HZC03099.1"
                     /translation="ARDEIEADYDDESVTVGFNARYLMDVLNVVDDEQVILEVKDAVS
                     SSLMRAATDPDSLYVIMPLRL"
BASE COUNT          206 a          302 c          274 g          223 t
ORIGIN      
        1 aaggcatgcg cctccttccc acctcccttg tcattgtcgc caggtcctag tgctggctga
       61 tagcataatt gcagggctgt agggctgccg agtttgagtg cgtttaaaca cgccagttgg
      121 ccgttcaagc gctgcaggta atgcgcccgc gcttgcacga gcgcgccgcc tgcttgagcg
      181 aatttgctat tccagacctc caggctggca cggtcgacct ttggactttt caggagtcga
      241 ttccggtgtt tgagtaccat atgatgattc tgcaagaggc tgagataggt cggctgcaga
      301 ctgacgagag cacgatcgac caaccggcgc cgtccgtcgg gagaaccttt gatgacctgc
      361 acggaatcgg cggcgaagac cagagcattg agatgtccca ggtaatcgac tgtgcgattg
      421 atctcccgtc cctgcacctg caggatacgg cgctgcccat tccatgacat accgagctgc
      481 actgccgcac catgtgccgg atgcgccagt gtgccccgca aactgacgac atccgctccc
      541 cagcgcgtca gttctgcacg ccctacccct cgaaacgagc gtaactggcc gagcacatag
      601 atgctctcca ggatattagt ctttccctgt ccattgtccc ccacgaagat gttcagtcgg
      661 ggtgcgcagg ccagctccag tcgttcgaag ttacggaaat ttcgtgcctg caacgtcagt
      721 aaccgcacgc agggctccca tatccaggca tcatagaaga cagtgccgag gactgagtgc
      781 tgtctttctt gctgcctttc gctgtgctac agtcgcaaag gcatgatgac atagagactg
      841 tcaggatcgg tcgccgcccg catgagcgaa gagctgacgg catctttgac ctccaggatg
      901 acctgctcat cgtccacgac atttaagaca tccatgaggt accgtgcatt gaaccctacg
      961 gtgaccgact catcgtcgta gtcagcctcg atttcgtcgc gggct
//
LOCUS       DASQSL010001742         1011 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_26953, whole genome shotgun sequence.
ACCESSION   DASQSL010001742 DASQSL010000000
VERSION     DASQSL010001742.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26953"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..577)
                     /locus_tag="VE844_17605"
     CDS             complement(<1..577)
                     /locus_tag="VE844_17605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03100.1"
                     /translation="MGSLREAFCLPLEARLHQGFAHLGTGQSNATDRDTQGLMLVQIA
                     LDFARRHDILSIVVLDAFFSIGAVFELANAVWSIALKQPYLPLLTRAKKSYVASLEPL
                     APTSKPRGGPPKYGDKIKLKTVFETYQHQFLQAECQLYGDVEMISYLALNLLWKLIKG
                     PVRFIFAITSCGPLILMCSDLTMAPLLAIELY"
     gene            826..>1011
                     /locus_tag="VE844_17610"
     CDS             826..>1011
                     /locus_tag="VE844_17610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03101.1"
                     /translation="MIVGLLHEPESAQRGEALKVRGADEAENDDPEQDLGRVSRKKRA
                     NGSEPVVKIAQSKHAIPL"
BASE COUNT          246 a          265 c          327 g          173 t
ORIGIN      
        1 aatagagttc gatggccaga agtggcgcca tggtcagatc actacacatc aggataagag
       61 ggccgcaaga ggtgatggca aagataaagc gcacgggtcc cttgatcagc ttccacagca
      121 ggttgagagc cagatacgag atcatctcca cgtcgccata gagctggcac tccgcctgga
      181 gaaactgatg ctgataggtc tcaaagacgg tcttgagttt gattttatcg ccatatttgg
      241 gggggcctcc acgcggcttt gacgttggcg cgaggggttc gagagaggcc acgtagctct
      301 ttttggctcg ggttaagagg gggagatagg gttgcttgag cgcaatggac caaacggcgt
      361 tagccagctc aaagacggcc ccgatggaga aaaaggcatc taagacgaca atcgaaagga
      421 tgtcatggcg ccgggcaaag tccagggcta tctgcacgag cataaggccc tgggtatcgc
      481 ggtcggtggc gttcgactga cctgtaccta ggtgagcgaa cccctggtgc agacgggcct
      541 caagaggcag acaaaaggcc tcgcgcagcg agcccaccag gacgcccacc acgccccagt
      601 aatggccccg gtcgtaggtg ggtttacttt gggttcgctg tcctgatgtg aggtgacgac
      661 gccaggcatg cgccgggcat ccttgacgac ggcagtatga tcgcctagca ggacggcccg
      721 gcccgcgacc ctcacggcga cctgttgact caaaacgcgc tgactccagt ggcgcacaag
      781 gtcccccagc gaccaggccg aggagtggaa aaagtgtaag aggcggtgat cgtcggcctc
      841 ctccatgaac cagaatcggc acaacgaggt gaggccctca aggtgagggg tgccgatgaa
      901 gccgagaatg acgacccaga acaagaccta gggcgtgtgt cgcgaaaaaa gagggcgaac
      961 gggagcgagc ctgtggtaaa gatagctcag agcaagcatg cgattcccct t
//
LOCUS       DASQSL010001743         1742 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_136417, whole genome shotgun sequence.
ACCESSION   DASQSL010001743 DASQSL010000000
VERSION     DASQSL010001743.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1742
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136417"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            17..283
                     /locus_tag="VE844_17615"
     CDS             17..283
                     /locus_tag="VE844_17615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03102.1"
                     /translation="MDPYEQFCHNPDCPDLVRTQKFCKKIKLPLLTEVSPRLCRGTHR
                     GLSYAAVEKDEASYSAGYFICIPPFSKGGQGGFMAVVRRAVLIR"
     gene            357..1511
                     /locus_tag="VE844_17620"
     CDS             357..1511
                     /locus_tag="VE844_17620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03103.1"
                     /translation="MRKAKDWNQPCPNPVCDQYQRMNPGNISAIATYATQSGTRRIFK
                     CRDCEGRFSETRDTVFFDLRRAEEKVMMALKLLLVRVELAPISFGLGVTEEPLIEGRR
                     RAALKAEAINAHLLREVSLTHLQLDELWNFIAPKCSHASDAQGESLAQSDDGRQWIGL
                     SYAPEYRLIGAAFVGPRTFESPLHLIRMTAAGVARIPAFFSDCLSPYLPALVGVYHRL
                     QVFPRTGKPGRPRKPLLEPDPEWVYAPLSKQKRKGRLTVLGERVVLGAEKLARLGVNI
                     STTLIERLNQTFRHPLSPLVPKSRSLCKTRTQRRRRVVFFQTFYNFARPHMSLRTAIP
                     LHERVSKGLIQPRWSQCTPAMAAGLTHYVWTFRELLTAKFEPVHYQSISG"
     gene            1508..1675
                     /locus_tag="VE844_17625"
     CDS             1508..1675
                     /locus_tag="VE844_17625"
                     /inference="COORDINATES: protein motif:HMM:NF019540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003729 - mRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HZC03104.1"
                     /translation="MSTRAYGCDLLREDGRHSWWHNPNQNKRSSVPRHNEIDDLLANK
                     ICKDLGITPVK"
BASE COUNT          400 a          493 c          493 g          356 t
ORIGIN      
        1 ctcaaggaga tcatcgatgg acccatacga gcaattctgt cacaacccag actgtcccga
       61 cctggttcgt acccagaaat tttgtaaaaa aataaagctc cccttactca cagaggtaag
      121 cccccggctc tgccggggga ctcaccgagg tttgagctat gccgcggtcg agaaagatga
      181 ggcgagttat tctgcaggat acttcatctg cattcccccc tttagcaaag gggggcaggg
      241 gggatttatg gcggtcgtgc gcagggcggt actcatccgc taatactttg aaaaatagaa
      301 gagccaaggc tactgtgggt tttcggcaga aaaccatccg gtaggagacg tggctcttga
      361 gaaaagcgaa agattggaat caaccgtgtc cgaatccagt gtgtgaccag tatcagcgca
      421 tgaacccggg aaacatcagc gcgattgcga cctacgcaac acaaagcggc acccggcgca
      481 ttttcaaatg ccgtgactgt gaagggaggt tctccgagac ccgtgacacg gtcttctttg
      541 atctgcggag ggcggaagaa aaagtcatga tggcgttgaa gctgctgcta gttagagtcg
      601 aactcgcgcc gatcagcttt gggcttgggg ttaccgaaga acccctgatc gaagggcggc
      661 ggcgggcagc gctcaaagcc gaagcgatca acgcgcacct gctgcgcgag gtctccctca
      721 cccacctcca actcgatgag ctgtggaact ttattgcgcc caagtgtagc cacgcctcgg
      781 atgcacaggg ggaaagcctg gcccagagtg acgacggacg tcaatggatc gggctcagtt
      841 atgccccgga gtatcgtttg atcggggccg ccttcgtcgg acccaggacg tttgaaagcc
      901 ccttgcacct gatccggatg actgccgccg gggtggcacg gatccccgcc ttcttcagcg
      961 attgcttgag cccgtatctg ccggccttgg tcggggtgta tcatcgcctc caggtgtttc
     1021 cccgcacggg caagccgggc cgaccgcgta agcccctgct tgagcccgac cccgagtggg
     1081 tctatgctcc gctgagcaag cagaaaagaa aagggcgact gaccgtcttg ggcgagcggg
     1141 tcgtgctggg cgctgagaaa ttggcacgct tgggcgtgaa catcagcacc accttgatcg
     1201 aacgcctcaa tcaaaccttc cgccacccct tgtctccctt ggtccctaag agccgctcct
     1261 tgtgtaagac acgcacgcag aggagacggc gcgtcgtctt ttttcaaacc ttctataact
     1321 ttgcccgacc ccacatgagt ttgagaacag ctatcccgct gcacgagcgg gtaagtaaag
     1381 gcctgattca acccaggtgg agccaatgta cccccgccat ggcggccggg ttgacccatt
     1441 acgtctggac atttcgagag ttgctcacag ctaaattcga gcctgttcat tatcaaagta
     1501 ttagcggatg agtaccaggg cttacggctg cgatttactg cgtgaagatg ggcggcattc
     1561 gtggtggcac aatccgaatc agaacaagcg ctcttctgtt ccgcgccaca acgagatcga
     1621 cgatctactc gcaaacaaga tatgcaaaga tttggggata actccagtga aatgaccgct
     1681 aaccatacgc tccactcgga cgcggcaaat agcgccgcgc cggtgagctt acccgttacc
     1741 gt
//
LOCUS       DASQSL010001744         1023 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_106824, whole genome shotgun sequence.
ACCESSION   DASQSL010001744 DASQSL010000000
VERSION     DASQSL010001744.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106824"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(303..>1023)
                     /locus_tag="VE844_17630"
     CDS             complement(303..>1023)
                     /locus_tag="VE844_17630"
                     /inference="COORDINATES: protein motif:HMM:NF014430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03105.1"
                     /translation="CDFLKRWPTLEAVQHTNAAALRKCFQAHHVHHPAINQQRIDEIR
                     HAVPATTDQAVIRASVMVVHTLVEQVRALAEAIRRFEQEIAGLTRSHVDFPIFASLPG
                     AGPVHASRLISALGTDRTRYECVEDLLTFAGIAPIIERSGKTIVTHFRWFCPKFLRQS
                     FHEFAGQSIQYSQWAKAFYRPQRMRGKDPQAAVRSLAFKWTRIIFQMWKRRTPYHERT
                     YLAALQRRGSPLCHMLAEHPA"
BASE COUNT          216 a          289 c          307 g          211 t
ORIGIN      
        1 cttgatcgtc aaccccgtcc gcccacatcg ggtggagccg cgtgtcaaga agcggcggcc
       61 caagagcttc ccgttcatga tcaagccccg gcaagcactg cgtcagcagt tggtccagca
      121 agcactccga ggttaacttc atgccattcg cccaagagcc ataaatcgtt cacatccgta
      181 tagacggttg gcggatactc cccttgcgcc aggaaatacg gtcggcttcc gtgcgcactg
      241 gagtaaagcc atctgagctg ctctcggcaa cgacaagaga gcaattcttg cgagaatttc
      301 gcctatgctg ggtgttcagc caacatatga cacagtggcg agccgcgtcg ttgtagcgcg
      361 gccagatagg ttcgctcgtg atacggtgtc cgacgcttcc acatctgaaa gataattcgc
      421 gtccacttaa acgccaaaga tcgcactgct gcctggggat ccttaccgcg catgcgctgt
      481 ggtcggtaga acgctttcgc ccattgggag tactggatgg actgcccggc aaactcatgg
      541 aacgattggc ggagaaattt ggggcaaaac cagcggaagt gcgtcacgat cgttttgcca
      601 cttcgttcga tgatcggagc aatgccggcg aaggtcagta aatcctcgac gcactcatac
      661 cgagtccgat ctgtgcctag cgcactgatc aggcgcgagg catggacggg ccctgcaccc
      721 ggtagtgatg cgaagattgg gaaatccacg tgtgagcggg tgagccctgc aatctcttgc
      781 tcaaaccgcc gaatggcttc ggccagggcg cgtacttgct cgaccagggt gtgcacgacc
      841 atcacggagg cgcggatcac ggcttgatcg gtggtcgcag ggaccgcgtg acgtatttcg
      901 tctatccgct gctgattgat ggcggggtgg tgtacatgat gcgcctgaaa gcacttccgc
      961 aaggccgcgg cattcgtgtg ctggaccgct tccagggtgg gccagcgctt gaggaaatca
     1021 cag
//
LOCUS       DASQSL010001745         1352 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_106839, whole genome shotgun sequence.
ACCESSION   DASQSL010001745 DASQSL010000000
VERSION     DASQSL010001745.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1352
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106839"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..502)
                     /locus_tag="VE844_17635"
                     /pseudo
     CDS             complement(1..502)
                     /locus_tag="VE844_17635"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
     gene            complement(660..800)
                     /locus_tag="VE844_17640"
     CDS             complement(660..800)
                     /locus_tag="VE844_17640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03106.1"
                     /translation="MTTEVDFLLIGGGLASATAAKTLREQGVEGAVAILAAEPLLITA
                     RR"
     gene            complement(939..>1352)
                     /locus_tag="VE844_17645"
     CDS             complement(939..>1352)
                     /locus_tag="VE844_17645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016862989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HZC03107.1"
                     /translation="EEFQRLLSCLVEGNQVWAKAAPVLALGIAKLRFARNDQPNRAAI
                     HDLGLAAGNLVVEATARGLWVHQMIGILPDKARETYAIPEGYEPLTGIAIGYAGDPKA
                     LPEGLRERDLARRPRKPLKEFVFGQTWGNVSEIIR"
BASE COUNT          258 a          421 c          403 g          270 t
ORIGIN      
        1 tggtttgcaa gtattgatcg accaggatgc catcctcgag cttgatcccg ctgtcggcga
       61 gaaacccgat ttcagggtcg atcccaatac ccaccgcgac catatccaag gcgagctccc
      121 tgcccgagct agtcatgagc cgctcgaccc gcccgttgcc ttggaagatc ttgaccgttt
      181 ctcgaaagac gatctcgacg ccgcgggcgc ggtagtagtc agcgaaaaac gccgagatct
      241 cgggcgaatc gagcttgcta tagagccggt cttcccgggc gatgagagtg gtcttgatcc
      301 cctgctcggc gaacgaggcc gaaagctcca tcgcgatgaa gctcgagctg accaccgccg
      361 cccgcttggc cttagccatg gcccgttgca aggcttcggc ttccgcgagc gtacgaagat
      421 aaaagatacc gggcagatcg gcgcccggca cctcgagtcg ccgcggacag ccgcccgtcg
      481 cgatgaggag cttccggtac gtgaagtcac ccgcgctgtc ggtgcagacg cgtcttttct
      541 ggggctcgac ggcgagcgcc cggggccgag caagacctgc acaccgtggt cccgaaagta
      601 agcttcgttc aggaccagca ggcttgcatg cggccgtttc cccaacaaga agcccttggt
      661 cagcggcggg cggtgataag gagtggttcc gctgcgagga tggccacggc gccctcgacc
      721 ccttgttctc tcagggtctt agcggcagtc gcactggcga gcccaccgcc gatgagcagg
      781 aaatcgacct cagtggtcat ggacgttctt aagggaggcc aaatagcagt gcttcggcgc
      841 tgctatccgt gtttagggtc agcggcttgc tcgctaccac ccgggcgccg tctatggccc
      901 cgtgcaaagc ttttgcgcac accgatcatg ggatcctcct acctgatgat ctctgagacg
      961 tttccccacg tttgaccgaa gacaaattcc ttaaggggct tacgtggacg gcgcgcgagg
     1021 tctcgttctc tgagaccctc gggcaaagcc ttgggatctc ctgcatagcc aatagcgata
     1081 cctgtcaggg gttcataacc ttcaggtatc gcataggttt cgcgggcttt gtccggcagg
     1141 atcccgatca tttgatgcac ccagaggccc cgcgccgtgg cttccactac caagttgccg
     1201 gccgccagac ccagatcgtg aatggccgca cgattgggtt gatcatttcg ggcaaaccgg
     1261 agtttggcga tcccaagcgc caggaccggg gcggctttgg cccatacttg gtttccctcc
     1321 accaagcagg acaggagccg ctgaaattct tc
//
LOCUS       DASQSL010001746         1290 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_149312, whole genome shotgun sequence.
ACCESSION   DASQSL010001746 DASQSL010000000
VERSION     DASQSL010001746.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149312"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            176..643
                     /locus_tag="VE844_17650"
     CDS             176..643
                     /locus_tag="VE844_17650"
                     /inference="COORDINATES: protein motif:HMM:NF024776.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC03108.1"
                     /translation="MRTAIPPIMDHADDLRHRLQREHNGHKKPRLQMLYLLASGQART
                     RQDVAHLLGVHRNTIGRWLAIYASGGLDVLLATYVPAGKPLSLAPAVLASLEQALHCP
                     AGFASYEALRRWVRQTHGVEVKYKTLYNIVRTRFRAKLKVPRPSHTKKAGGHR"
     gene            669..1226
                     /locus_tag="VE844_17655"
     CDS             669..1226
                     /locus_tag="VE844_17655"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC03109.1"
                     /translation="MQRVIPAENRRPVRVFSQDESRFGLLTVRRRRLTACGVQPVGLI
                     QHVFEWFYVYGAVAPTTGERFFLELPYLNADMFQLFIDAFAQAFPDSLNILLLDSSGA
                     HTAQGLHWPAHVRYVRLPPYCPELSPIERVWRDVKDDVAWRQFPDLDTQQNEVGDLLR
                     AYDPTTLQSLTGYAYLLEANNALCL"
BASE COUNT          253 a          396 c          364 g          277 t
ORIGIN      
        1 gtccgtggcc tgctgttggg tctcagccgg cacttcgtaa atccgaatga tggtatagac
       61 ggccataggt ctctcacctc caatctcagg ggtaatatga attccagttg aagatgatgc
      121 atattgttgc tatcctccac gacctcaacg atgagcctga cctggaggat aggctatgcg
      181 cacagccata ccgccgatta tggaccatgc ggatgatctt cgacaccgct tgcaacgtga
      241 acataacggc cataagaaac cccgcctgca gatgctctac ctcttggcca gcgggcaagc
      301 ccgtacccgg caggacgtgg cacacctgct gggggtgcac cgcaatacga tcggccgctg
      361 gttggcgatc tatgcctccg gggggctgga cgtgttgctg gccacctatg tgccggctgg
      421 caagcccctc tccctcgcgc cagcggtact ggctagcctc gagcaagccc tgcattgtcc
      481 ggcaggcttc gcctcatatg aggcgctacg ccgctgggtc cggcagacgc acggggtgga
      541 ggtcaagtac aagacgctct acaacatcgt gcgcacgcgc ttccgggcca agctcaaagt
      601 gccgcgcccc agccacacaa aaaaagccgg aggccatcgc tgagttccag gccacatgtc
      661 gtgagcgcct gcagcgcgtc atccctgctg agaaccgccg cccggtccgg gtgtttagcc
      721 aagatgaaag ccggttcggg ttgctgacgg tgcgccgccg ccggttaacg gcctgcggcg
      781 tccaaccggt cgggctcatc cagcacgttt ttgagtggtt ctatgtctac ggcgcggtgg
      841 ctcccaccac gggcgagcgg ttctttttgg agttgcccta tctgaacgcg gacatgttcc
      901 aactcttcat cgatgccttt gcccaggcct tcccagacag tttgaatatc ctactcttgg
      961 atagcagtgg cgcgcatact gcccaaggcc ttcattggcc agcgcatgtc cgatacgtgc
     1021 ggttgccccc ctactgtccg gagctgagcc ccattgagcg ggtctggcga gacgtgaagg
     1081 atgacgtcgc ttggcgccag ttccccgatt tagacacgca acagaacgag gtgggcgact
     1141 tgttacgggc ctatgatccc accacccttc aatcgctcac ggggtacgct tacctgctgg
     1201 aagcgaataa tgccctatgt ttataggaaa gtcatataac aggcaacttg ctattatcgt
     1261 gcttctttcc acatcgtggc cacgtattca
//
LOCUS       DASQSL010001747         1375 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_27039, whole genome shotgun sequence.
ACCESSION   DASQSL010001747 DASQSL010000000
VERSION     DASQSL010001747.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1375
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27039"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..319)
                     /locus_tag="VE844_17660"
     CDS             complement(<1..319)
                     /locus_tag="VE844_17660"
                     /inference="COORDINATES: protein motif:HMM:NF016996.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-tyrosine/L-tryptophan isonitrile synthase
                     family protein"
                     /protein_id="HZC03110.1"
                     /translation="MSAQARTLFADSAGLDTALPADPDSVLSTQYDCEMAANILRVVM
                     EYQRRAADASCISHPCDSCIAVHRGRLMRLVSRNVPVDFVLPAFPAKSPNMSKVLGVT
                     PDMA"
     gene            complement(610..1272)
                     /locus_tag="VE844_17665"
     CDS             complement(610..1272)
                     /locus_tag="VE844_17665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008731232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC03111.1"
                     /translation="MTYFRTNVTQEVIAELLFVDQSTISRTISDLEEILAEALDEFVP
                     ELPEEIKGQVAVVDGSLCPCWSWTDAPELYSGKHKTTGHAHQFVCDLSGNLMHISDPL
                     LGNTHDAKAIHQTGLNELPGDDNAIGDKGYIGTGITTPYRKPAGGELLDWQKEFNTSI
                     NKTRYVIERAIAHFKAWQCLHTDYRRPERTYATAFNQRRPSTPLLQTTFRISLSTYHS
                     HE"
BASE COUNT          261 a          361 c          437 g          316 t
ORIGIN      
        1 ctgccatatc gggcgtaaca ccgagcactt tggacatatt gggagacttg gcagggaagg
       61 ccggaagcac gaagtcgacc gggacatttc gcgagacgag tcgcatgagc cgcccccggt
      121 ggacagctat gcagctatca cagggatggg agatgcagga tgcatccgct gcccgccgct
      181 ggtattccat gacgactcta agtatgttcg cggccatttc acaatcgtat tgagttgaca
      241 aaacactgtc gggatcggca ggcagtgccg tgtccagtcc agcgctatct gcaaacaagg
      301 ttcgggcttg agcactcata gtgggtcctt cctcccatat ggatgctgcg ggttctatgg
      361 accacgtggc ctcacggtgc gggcggcccg gctgacctga actcccatct gcgacacctt
      421 cgtgtgccaa caaccgggga ttctcttcgc ctatccgatc cgctcgctgt cacctactcg
      481 acagtgacca cgtcagcttg ctgacacctt tggggtgccg cggatcccat ctctagcggc
      541 caggaagctc ggcgatagcg cggggcaagt cgaaaaggta tcgcagacaa gcgcagacac
      601 aagcgttgat tattcatggg agtggtaggt actgaggctt atgcgaaacg tagtttgaag
      661 aagtggagtg ctcggacggc gttggttgaa ggctgtggcg taggtgcgct caggtctgcg
      721 gtagtcggtg tgcaggcact gccaagcctt gaaatgagcg atcgcgcgtt cgatgacgta
      781 gcgagtctta ttgattgagg tgttgaactc tttttgccag tcgagaagct cccctccggc
      841 tggtttgcgg tacggggtgg tgatgccggt tccgatgtag cctttgtcgc cgatggcgtt
      901 gtcatcgccg gggagttcgt tcaggccggt ctggtgtatg gccttcgcgt cgtgggtgtt
      961 gccgagcagt gggtcggaga tgtgcatcaa gttcccggac agatcgcaga cgaattgatg
     1021 ggcgtggccg gtggtcttgt gcttgccgga gtacagctcg ggcgcatcgg tccaggacca
     1081 gcagggacac agtgagccat cgaccactgc gacttggccc ttgatctcct cgggtagctc
     1141 ggggacgaac tcgtcgagcg cctcggcgag gatttcttcc agatcactga tcgttctaga
     1201 gattgtggat tgatcaacga acagcagttc ggcgatcact tcctgggtga cgttggtacg
     1261 gaagtaggtc acgacccgct ttcactgctt ggcgaagcgt cagttctttt gacctgccct
     1321 gtccgcagtc ccaaactagg cgctgtccga tacgtttgac gagctcgtcg aattg
//
LOCUS       DASQSL010001748         2429 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_162277, whole genome shotgun sequence.
ACCESSION   DASQSL010001748 DASQSL010000000
VERSION     DASQSL010001748.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2429)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2429
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162277"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(127..657)
                     /locus_tag="VE844_17670"
     CDS             complement(127..657)
                     /locus_tag="VE844_17670"
                     /inference="COORDINATES: protein motif:HMM:NF019984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron maturase-specific
                     domain-containing protein"
                     /protein_id="HZC03112.1"
                     /translation="MICSETFARLDRFVWRRLYRWAKRRHPDKTGRWNAERYFPHQPG
                     EAWRFTDPLTGKQVIRVQEAVKPQRYLKVKGEANPFDPVWEGYFQHRDRELALHASSA
                     FRATLLRQQHGLCPGCRQVIQVEEKLDLHHRDGNHQNNQLGNLVLLHPNCHRQEHYAP
                     EYTTESSRPSRGVGHA"
     gene            complement(647..1813)
                     /locus_tag="VE844_17675"
     CDS             complement(647..1813)
                     /locus_tag="VE844_17675"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HZC03113.1"
                     /translation="MSSIALQASLGLLPAWHSIDWAGCYRRVRSLQRRIVQAVQAGAW
                     RKVKRLSYLLVNSFGGRALAVKRATENAGKKTPGIDGELWDSPEKKAEAVARIGQWRD
                     YQPLPLKRIYIPKKDGKQRPLSIPVMEDRARQALYLQALQPIAETQADRNSYGFRPKR
                     RCADAIDQCFKVLRQKGSACWILEGDIQGFFDPIAFSWIEEHIPMNKRILAKWLRCGF
                     IDHSARYPTTAGVPQGGIISPVISNLVLDGLEQVACGSSRFRRRHHLNYVRWADDFIV
                     TANSREVLEEVVLPRINAFLAERGVWLSTEKTVITPIWEGFDFLGQTLRKHERCNGKP
                     AKLRITPSKASFQALKDKVRTRCKQAVGATAEALIDTLNPHLARLGKLSSPCDL"
BASE COUNT          449 a          761 c          696 g          523 t
ORIGIN      
        1 tgtttgtact gccattatac acctcctacg agctttaatt agtctgagta gccgccgggt
       61 agccaggcga ggtcaccccc gcccagcccc ctcagaacgc agcgggccac tttcgcggca
      121 ctgcgctcaa gcatgaccaa cgccccgtga gggacgcgac gattcagtgg tatattccgg
      181 tgcatagtgt tcctgccgat ggcaattggg atggagcaac accaggttgc ccagttggtt
      241 attttggtgg ttaccatccc gatgatgcaa gtccagtttc tcttcgactt ggatcacctg
      301 tcggcagccc gggcagagcc cgtgctgttg tctcagcagg gttgcacgaa acgccgaaga
      361 cgcgtgcagt gccagctcgc ggtcgcggtg ctgaaaatac ccctcccaga ccgggtcgaa
      421 ggggttggct tcgcccttga ccttgagata gcgctgcggt ttgaccgcct cttgcacccg
      481 gatcacctgc ttgccggtga gcggatcggt gaagcgccaa gcctctcccg gttggtgggg
      541 aaagtagcgc tcggcgttcc agcgtccggt cttgtccgga tggcggcgct tggcccagcg
      601 atacagccgt cgccagacaa agcggtcgag ccgggcgaag gtctcactac agatcacatg
      661 gcgatgataa tttgcccagc cgcgcgaggt gagggttgag ggtatcgatg agcgcttccg
      721 cggtggcacc cacggcttgc ttacagcggg ttcgaacctt gtccttgaga gcctggaagc
      781 tagccttgct gggggtaatg cgcagcttgg ccggcttgcc gttgcaccgc tcgtgtttgc
      841 gcaaggtctg tcctaagaag tcaaaaccct cccagatggg ggtgatgacg gtcttctccg
      901 tcgatagcca cacgccccgt tctgctaaaa aggcattgat ccgcggtagg acaacctctt
      961 ctaatacctc ccgcgaattg gccgtgacga tgaagtcgtc ggcccatctc acatagttga
     1021 ggtggtgacg gcgccggaag cgcgaggaac cacaagccac ttgttccaga ccgtccaaca
     1081 ccaggttgct gatcacgggc gagatgatgc ccccttgcgg gacaccggcc gtggtcgggt
     1141 atcgggcgct atggtcgatg aagccacagc ggagccattt cgccaggatt cgcttgttca
     1201 tggggatgtg ttcttctatc caggaaaaag cgatggggtc gaaaaagcct tggatatccc
     1261 cttccaagat ccagcaggca gagcctttct ggcgcagtac tttgaagcac tggtcgatgg
     1321 catccgcaca ccttcgcttg ggccgaaatc cgtaggaatt acgatccgcc tgagtttcgg
     1381 caatcggctg cagcgcctgt agatataagg cttgccgcgc ccggtcttcc atcaccggga
     1441 tcgacagcgg gcgttgtttg ccgtctttct tggggatata aatccgtttc aggggcagcg
     1501 gctggtagtc ccgccactgt ccgatccgtg ctaccgcttc agctttcttc tcggggctgt
     1561 cccagagctc accatcgatg ccgggcgtct tcttcccagc gttctcagtc gctcgcttga
     1621 cggctaaggc gcgcccacca aacgagttga ccaacagata actcagacgc ttgactttgc
     1681 gccaggcgcc tgcctgaacc gcctggacga tccgccgttg cagggaccgt acccgccgat
     1741 aacagcccgc ccagtcgatg ctgtgccagg ccggtagcag gcccaaggac gcttgtagcg
     1801 caatgctact cattggaaac agagcctcgg tttacggttt gccacgtctt cttcgtccgg
     1861 tcacacccgc gggaagtcag ccgcctttcg gcgtggggct aaacccctat cttgaccatt
     1921 acagtcaagc attcgcttcc tcccgcgtcc tttaccggct ccgccgttcc cctcccttgc
     1981 ggtcgggcga ctccgggggc ttacgctttg caccgcccca gagagcgaat ccggcttacc
     2041 acgtttcgca gttcgcacct atagacgggg ttagggcgcc tctgtacacc gagggatacc
     2101 acacgtgcgt cggcagaccg ttaaaaccca ccgaacctga tccccctccc attttgggtc
     2161 tggagccact aagccgctta agctccgcgc ttttacgatg cgtaatacca aggctttact
     2221 tacattaccc ttacccgcca ttccccgcag tcggtgccgt gtgcgactca cggtcccgac
     2281 ggctgctgcg tgcttgagac ccctcccgac cccatcggtg tcggtggcgc ccccgcagcg
     2341 cggagacaga gggcacgacc tcatgactga atcatccctt cctggtgacg ttcagcagta
     2401 caaaccgcaa cctcgtgtcg cggtaacga
//
LOCUS       DASQSL010001749         1408 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_92513, whole genome shotgun sequence.
ACCESSION   DASQSL010001749 DASQSL010000000
VERSION     DASQSL010001749.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1408
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92513"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..267
                     /locus_tag="VE844_17680"
     CDS             <1..267
                     /locus_tag="VE844_17680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03114.1"
                     /translation="THCLILDREKSKLLIGPVQEAHIFLTEQWPPEPPLLMSQKEYVA
                     KLSEALKNVKKPDDIDIEEIQQRIEEQYSPVEAMQRWLDKYLKN"
     gene            731..1285
                     /locus_tag="VE844_17685"
     CDS             731..1285
                     /locus_tag="VE844_17685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03115.1"
                     /translation="MRPLLCAVATMCVLVLAGTVMAQAQAPLLSRGTQELALSGILDF
                     KNRGDTTLDLIGRYGYFLRDNLEMGGVAAFSGNFDDAFRYGLGGFAEYHFPQWIPADW
                     PRLVPYLGADVLLSFVDTDFGDDNAALTFEPRVGLKWFIRDYFAVETHLFYAIATDDL
                     FQNDRDDLDPYDYGLRVGIRVYFR"
BASE COUNT          294 a          396 c          393 g          325 t
ORIGIN      
        1 acacactgcc tgattctcga cagggagaag agtaaactgt tgattgggcc ggtgcaggag
       61 gcgcatatct ttctgacgga gcagtggccg ccggagccgc ccctcctcat gagtcaaaaa
      121 gagtatgtgg ctaagctctc cgaagcgctg aaaaatgtga aaaaaccaga tgacatagat
      181 atcgaggaga ttcaacagcg cattgaagag cagtattccc cggtcgaggc gatgcagcgg
      241 tggcttgata agtatttgaa aaattgagcc ttaataatct tatagaaaat cgcggatttt
      301 ttcttgtcgc ttcaaaacgg gatccggccg acacacacat ggccagaacc tcctgggtca
      361 tcgccacttt tggtgacaag gggcggtgcc ggctacagtc gcggtctggg tgtgcccgcg
      421 ccgcggctcc acggatgtgt atgcttcctt gtgcaacacc atcatacgta ccccctctcc
      481 cgctcaccac ggcatcctcg ccaccaggag ggagcttccc atttgacccc agtagatgac
      541 cggtcccacc ctggtggcct gcgctgcttc ggacacaagg ggggggaagg ggaaatttcc
      601 tcacattgga aggcgcactg ctctataata cggcctcggc agctgtctca tcttgggtga
      661 caggtcgatg cccctctgtg tcgctcgctc ccgatcatcg cgcgtctgaa ggtcacgaag
      721 gagagaggaa atgcgtccat tgctgtgtgc cgtcgccacc atgtgtgtgc tggtccttgc
      781 tgggactgtg atggctcaag cccaagcccc gctgctctca agaggcaccc aagaactcgc
      841 cctgtctggc atactagatt ttaagaatcg gggcgatacc acgctcgatc tcatcgggcg
      901 gtatggctat tttcttcggg acaacctgga gatgggtggg gtggcagcct tttcgggcaa
      961 tttcgatgat gcctttcgct acgggctcgg gggatttgcg gaatatcatt ttccgcaatg
     1021 gatccccgca gactggccgc gtcttgtccc ctacctgggc gcggacgtcc tcctctcctt
     1081 tgtcgacacg gacttcggag acgataatgc cgcactgacg ttcgaaccgc gggtaggcct
     1141 gaagtggttc atccgcgact acttcgcggt tgagacgcat ctgttctacg ctattgcgac
     1201 cgatgacctc tttcaaaatg acagagatga cctggatcct tatgattacg gcctccgagt
     1261 cgggattcgg gtctatttcc gctaacgccg tatggctctc accaaaaatg acgatgaccc
     1321 gaccttgttt acatcggtgg ggaattgtgc cgactcgcct gcaccgctcc tcaggccgtc
     1381 acctgcgacg ggccatgata ccgaaatt
//
LOCUS       DASQSL010001750         1607 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_117677, whole genome shotgun sequence.
ACCESSION   DASQSL010001750 DASQSL010000000
VERSION     DASQSL010001750.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117677"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            99..1049
                     /locus_tag="VE844_17690"
     CDS             99..1049
                     /locus_tag="VE844_17690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HZC03116.1"
                     /translation="MPILATVFKDSSCVVGRRNTMLRSHGRYEYSNITKRPDYSWPGG
                     QRLAVYVAVNVEQFSYGEGKGAGIAPPEQSNTHSIFSWRDYGNRVGIWRLFELFDELD
                     IPVEAQMNTATYEHCPDIPEKLRARGDEILGHGITNSEEQGHLDEAAESEFIHTVTET
                     IARHEGQRPIGWMSPWLSNSAVTADLLQEAGYRYFMDWTCDDQPIWMKTRKGRILAMP
                     YPIETNDNRAIVWFRYSSGELADMLIDNFDEMLEQSARQPLVCPISLHPFVMGRPYRI
                     RQLRRAFQHILRARERIWLTRPRDICAHIEGLPPGVVPGS"
     gene            1407..>1607
                     /locus_tag="VE844_17695"
     CDS             1407..>1607
                     /locus_tag="VE844_17695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03117.1"
                     /translation="MRRVSQTLMLLLMVAVAVLWMVTPVDAGQKGAAADRGPKPDARF
                     QLTTTSIAPNMGVSFADGRFSFK"
BASE COUNT          348 a          492 c          458 g          309 t
ORIGIN      
        1 gcttgataaa tggggtgcat tacaacctaa tgctccctac catccactgc tctcctggag
       61 cggtagccta caagacaggc ttgtaaaaca catgtataat gcctatcctc gccacagttt
      121 tcaaagacag ctcatgtgtc gtcggaagga ggaacaccat gctgcgcagc catggtcggt
      181 atgaatactc caacattacc aagcgaccgg actacagttg gcctgggggc caacggcttg
      241 cggtctatgt ggcggtcaac gtcgaacagt tcagctacgg cgagggcaag ggagccggca
      301 tcgcaccgcc ggagcagtcc aatacccata gcatcttctc ctggcgcgat tacggcaatc
      361 gcgtcggcat ctggcggctg tttgagctgt tcgacgagct cgatatcccc gtcgaagcgc
      421 agatgaacac ggccacctat gaacactgcc cggacatccc agagaaattg cgcgcccgcg
      481 gcgacgaaat cctcggacac ggcatcacca actccgagga acaaggccat ctcgacgaag
      541 ccgcggagag cgaattcatt cataccgtaa cggagaccat cgcgcgtcac gagggccagc
      601 gccccatcgg ctggatgagt ccgtggttgt cgaatagcgc cgtcaccgcg gacctcctgc
      661 aggaagccgg ctaccgctat ttcatggatt ggacctgcga cgaccagccg atctggatga
      721 agacccgcaa gggccgcatc ttggccatgc cataccccat cgaaaccaat gataatcggg
      781 cgatcgtgtg gttccgctac tcctcgggcg agctcgccga catgttgatt gacaacttcg
      841 atgagatgct cgagcagtcg gcccgacagc ccctcgtctg ccccatctcc ctgcacccct
      901 tcgtcatggg gcggccctac cgcattcgcc agctccggcg cgccttccag cacatcctac
      961 gcgcacggga gcgtatctgg ctgacacgcc cacgcgacat ctgcgcccac atcgaaggcc
     1021 tgccgccggg ggtggtcccg gggagctgag cccactcggc gcttgacaga cggctccttt
     1081 cactggtata agaaagcgtt taaatcccaa gaacatacca taaccccctg ttgcatatcg
     1141 cgaccaccca agagcagtgt tgacgcggcg tgagcatagg gccgtccttc cggaaacgcg
     1201 gtgctgggac tgctggctgt tgtcgcctgt ctggacaggc aatgtcgcga cagtaaagaa
     1261 ccgtcgtacc ctttggatca tgcatcttgt gctctgtcgt gcacgtattc tggaggagca
     1321 ctgtgctcct cttgatgtgg ccgtcgcact aaatgcagcg cgcgagacaa ggccgatcgg
     1381 ttaacaacag cagaaaggag accaaaatgc gccgcgtgag ccaaacactt atgctgctcc
     1441 tcatggttgc ggttgcagtg ctgtggatgg tgacgcccgt ggacgccggg caaaagggtg
     1501 cggccgcgga tcggggacca aagcctgatg cacgctttca gttgacgacg acctcgatcg
     1561 ctccgaatat gggggtcagt ttcgcagacg ggcggttcag tttcaag
//
LOCUS       DASQSL010001751         2518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_68313, whole genome shotgun sequence.
ACCESSION   DASQSL010001751 DASQSL010000000
VERSION     DASQSL010001751.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2518
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68313"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(98..1822)
                     /locus_tag="VE844_17700"
     CDS             complement(98..1822)
                     /locus_tag="VE844_17700"
                     /inference="COORDINATES: protein motif:HMM:NF033559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC03118.1"
                     /translation="MRKSQVPPWQPEMLALSVERLGPLPLINHFLERLALEAHLERFV
                     PTPRRRTRLPYAKGLGILLRSLLVEREPLYRQYETVSPFSPQAFGLEGALVEAVSDDA
                     VGRALDHLFDADRAALLTEVIVSAVQGFDLKLDELHNDSTTVRFCGQYTQARARKLRG
                     KRAPFITYGYSKDHRPDLKQLLFILTTSEDGGVPVQFRCAHGNTNDARTHEHTWEALC
                     RAAGRVDFLYIADSKLCNREPMDYIHRRGGRFVCVMPRSPREDSEFREWLQTHEPTWT
                     PVWDRPNPRQRGGPRDRWWVFRYPLPSSEGWPVIWVYSALLAIRQERTRRERLAQAHQ
                     ALHTLNMQLTGPRPRRRSRQEVQHRMEAILRKHKVVSYVNVELVEDQAHHFRQAKPGR
                     PGPHTRYVRKTRTFWRVQWHIEERAIDYDRKSDGMYPLLTNDCKLTDAQVLEAHKRQP
                     TIEKRFEQTKSVFEIAPVLLKNEGRVEALFFVYFLALLVQALIERELRRAMHRQGVDS
                     LPLYPEERTTQRPTAEQIFRLFSLMQRHLLKYKGETVHPFEPELTDLQQQVLTLLGVP
                     ETVYHAGI"
     gene            1867..2211
                     /locus_tag="VE844_17705"
     CDS             1867..2211
                     /locus_tag="VE844_17705"
                     /inference="COORDINATES: protein motif:HMM:NF042840.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6788 family protein"
                     /protein_id="HZC03119.1"
                     /translation="MKKPSRHRLRQRTQALRRAITTLDFIASGTLHTRTKVGGRPNCR
                     CAVDPNARHGPYHEWSRRHNQRLLHSVLTSEQAKLLTEAIANYPKIQQLLARWEQETA
                     KEILNPNGDADG"
BASE COUNT          497 a          747 c          755 g          519 t
ORIGIN      
        1 cgttgccggc aatgaggaga ttatcccgca accagtccta cattccgctc ttcttgaagg
       61 taatttctca gtaatttctg ctcgtgctgg gagggtatca gatgccagcg tggtagacgg
      121 tctcggggac accgagcagc gtgagcacct gttgttggag atcggtaagt tccggctcga
      181 agggatgaac ggtttctcct ttgtacttaa gaaggtgtcg ttgcatgagg ctgaacaggc
      241 ggaagatctg ttcggcggtt gggcgctggg ttgtgcgttc ttcagggtag agggggagac
      301 tgtccacacc ctggcggtgc atggcacgac gtagctcgcg ctcgatgagg gcctgcacca
      361 gcagtgccaa gaagtagacg aagaagagcg cctcgactcg cccctcattc ttgagcagga
      421 caggggcgat ctcaaagaca ctcttggtct gctcgaagcg cttctcgatg gtcggctggc
      481 gcttgtgggc ctcaaggacc tgagcatcgg tgagtttaca gtcattggtg agcaagggat
      541 acattccatc gctcttgcga tcgtaatcga tagcgcgctc ctcgatatgc cactgcaccc
      601 gccagaaggt gcgggtcttg cgcacataac gcgtgtgcgg tccgggtcga ccgggttttg
      661 cttgcctgaa gtggtgcgct tggtcctcga cgagttccac gttcacgtag ctcacgacct
      721 tgtgcttacg gaggatcgcc tccattcggt gctgcacctc ctggcgcgag cgtcgtctgg
      781 ggcgagggcc cgtgagctgc atgttcaacg tgtgcaacgc ctggtgcgcc tgcgcaaggc
      841 gctcgcgccg agtacgctct tggcgaatcg ccagcagcgc actgtagacc cagatgaccg
      901 gccatccctc gcttgaaggc aagggatagc gaaacaccca ccagcggtcg cgcggtccgc
      961 cgcgctgacg cgggttgggc cggtcccaca ccggtgtcca ggtgggttcg tgggtctgaa
     1021 gccactctcg gaactcgctg tcttcccggg gcgagcgcgg catgacgcaa acgaaacgcc
     1081 cgccacggcg gtggatgtag tccatcggct cacgattaca gagcttggag tcagcgatat
     1141 agaggaaatc cacgcggccg gccgcgcgac acagcgcctc ccaggtatgc tcatgggtac
     1201 gcgcgtcgtt ggtgttgccg tgcgcgcagc gaaattgcac ggggacgccg ccgtcctcac
     1261 tggtggtgag gataaagagc agctgtttga ggtcggggcg atggtctttc gagtagccat
     1321 aggtgataaa gggggcacgc ttgccccgca gctttcgcgc gcgggcctgc gtgtattgac
     1381 cacagaagcg cacggtggtc gaatcgttat gcagctcatc gagcttgagg tcgaacccct
     1441 gcaccgcgct gacgatcacc tcggtcagta acgctgcccg gtcggcatcg aagaggtgat
     1501 cgagcgcgcg tccgaccgca tcgtcgctca ccgcttccac gagcgcgccc tccagcccaa
     1561 acgcctgggg tgaaaacggg ctcaccgtct cgtactggcg gtacagcggt tcgcgctcca
     1621 ccagcaggct acgcagcagt atccccaagc ccttggcata gggtaggcga gtacggcgac
     1681 ggggggtggg cacgaaacgc tcgagatgtg cttcaagcgc taggcgttcg agaaagtggt
     1741 tgatgagcgg caagggtccc agtcgctcga cgctcagcgc gagcatctca ggctgccagg
     1801 gagggacttg acttttgcgc atctggcgac tatataattg ccagatatag acaatgtcaa
     1861 gcccctatga agaaacccag ccgtcaccga ctccgtcagc gtacccaagc attgcgccgc
     1921 gccatcacca ccctggactt catcgcctcc ggaaccctgc acacgcgcac aaaagtgggt
     1981 ggacggccaa actgtcgctg cgccgtagac cccaacgccc gtcacggccc ttaccacgag
     2041 tggagccgtc gtcacaatca gcgtctcctt cacagtgtct tgacctcaga gcaggccaaa
     2101 ctcctcaccg aagcgatcgc caattaccca aagatccagc agctccttgc ccgctgggag
     2161 caggaaaccg ccaaggagat cctcaacccc aacggcgacg ccgacggtta agtttttgtt
     2221 gcttcagcag aataattgtg aagaaatcag tactgagaag agcggaatgt aggtcagggt
     2281 tactcctgaa tttgtcattg cagcgtcttc gcagcctgca ctttcgttcg cacggaccat
     2341 tcaccgcact attgctgcta attgattttg caactgtcaa ccctctgccg tccttcgccc
     2401 tgtggctggc tttcccaacc tccgactact atgacggctc cgactctctt accagtcatc
     2461 ggctgactgc tagccttaac attctggtaa gagtctccca cgttcatgtt gatggact
//
LOCUS       DASQSL010001752         1031 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_27109, whole genome shotgun sequence.
ACCESSION   DASQSL010001752 DASQSL010000000
VERSION     DASQSL010001752.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1031
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27109"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..542)
                     /locus_tag="VE844_17710"
     CDS             complement(<1..542)
                     /locus_tag="VE844_17710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010961108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HZC03120.1"
                     /translation="MKKIIGIDLGTTNSCVAILEGGQPKVIENSEGSRTTPSIVAFTN
                     DEEVLVGQSAKRQAVTNPYNTLFAIKRLIGRKYDDNIVRRDIGMVPYKIVRADNGDAW
                     VDVKGKKMAPPEISARVLMKMKKTAEDYLGEKVTEAVITVPAYFNDSQRQATKDAGRI
                     AGLEVKRIINEPTAAALAYG"
     gene            complement(622..>1031)
                     /gene="grpE"
                     /locus_tag="VE844_17715"
     CDS             complement(622..>1031)
                     /gene="grpE"
                     /locus_tag="VE844_17715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010961109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HZC03121.1"
                     /translation="RARAEIDNVRKRTEREVANAHKYGQERLILELLPVKDSLELGLA
                     ASDQPTSIEGLREGIELTLKMFSTVLEKTGVTVIEPQGERFNPELHQAMTTQGSSEAE
                     PGTVLMVVQKGYLLHDRVLRPAMVVVAKEPSDA"
BASE COUNT          209 a          313 c          236 g          273 t
ORIGIN      
        1 atgccatagg ccagggccgc cgcggtaggc tcattgatga tacgtttgac ctcaagcccg
       61 gcaatgcggc cggcgtcttt agtggcctga cgctgcgagt cgttaaaata agccgggaca
      121 gtaatgactg cctccgtcac cttctcgccc aaataatcct cggccgtctt tttcatcttc
      181 atcaataccc gtgccgagat ctcgggtggg gccatcttct tgcctttgac gtctacccag
      241 gcatcgccat tatccgcccg cacgatctta tagggcacca tcccgatgtc gcgccgcacg
      301 atattatcgt cgtacttacg cccgatcagc cgcttgattg cgaacagggt attataaggg
      361 ttcgttaccg cctgccgctt ggcagattgt cctaccaaga cctcttcgtc attggtgaag
      421 gccacgatcg agggggtcgt gcgagaacct tcgctgtttt cgattacttt cggctgccca
      481 ccttccagga tggccacaca ggaattggta gtaccgagat ctataccgat tatctttttc
      541 atctatttaa gagactccac tcaaatcaac ccatacttgt atccactgtg ctttctcaat
      601 attgggccac tttcatggat ttcaagcgtc cgagggctcc ttcgccacga ctaccatcgc
      661 gggcctcagc acgcgatcat gcaataaata ccctttctgc accaccatca agaccgtgcc
      721 tggctccgcc tcgctggatc cctgcgtggt catggcctga tgcaactcag gattgaatcg
      781 ctcaccttgc ggctctatta ccgttacccc agttttttcg agcacggtgc taaacatctt
      841 caacgtcagc tcgatacctt cgcgtagacc ttcaatagag gtaggctgat cggaggcggc
      901 gagccctaat tccagactat cttttaccgg cagcagttct aggataagcc gttcctgtcc
      961 atatttatgg gcattggcca cctctctctc ggtacgtttg cgcacattat cgatctcagc
     1021 ccgcgctctt a
//
LOCUS       DASQSL010001753         1207 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_136548, whole genome shotgun sequence.
ACCESSION   DASQSL010001753 DASQSL010000000
VERSION     DASQSL010001753.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136548"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(60..1094)
                     /locus_tag="VE844_17720"
     CDS             complement(60..1094)
                     /locus_tag="VE844_17720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011467301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2333 family protein"
                     /protein_id="HZC03122.1"
                     /translation="MLEPVLKRPLQPVSQRLRGLLRHLVTPLVAAAVVFFGLGSYWSI
                     EPAVFDIREMALRQSGNDPKTLVPGAVTTATLIEVASTLLEKRGGFLSNDINPISLWL
                     DNIPNWEYGALVQVRDLTRVLRNDFSRSQTQSIEDRNLAIADPQFHFNNESWIFPTTE
                     SQYREGIEALKRYLALLEDPSRREGRFFVRIDSLRHWLGLVATRLGDLAHRLSASVGV
                     KNLDTYAIWNLEAGKAATKSKEPRYKTPWLKTDDVFYEARGATWALLHFMYAIQIDFA
                     QVLNDKKGMVSIQQITRKLAEAHKPVWSPMILNGTGYGVTANHSLVMASYISRAGAAV
                     VDLLNLLQQG"
BASE COUNT          256 a          347 c          335 g          269 t
ORIGIN      
        1 cgcgagttaa gccggcgata caacgcgata cacttgtctg aagaccaaac gcggcatggt
       61 cagccttgtt ggagcaggtt taagaggtcg accaccgctg cacccgcccg tgaaatgtag
      121 gaagccatta ccagggaatg attggccgtt acgccatatc cggtgccgtt tagaatcata
      181 ggactccaca caggtttgtg ggcttcggcc agttttcggg taatctgctg tatgcttacc
      241 atccccttct tatcatttaa gacctgtgcg aaatcgatct ggatggcgta catgaagtga
      301 agcagggccc aggtcgcgcc ccgcgcctcg tagaagacat cgtcagtctt gagccaaggg
      361 gtcttatacc tcggttcctt ggatttggtg gcggccttgc ccgcctccag gttccagatc
      421 gcataggtat cgagattctt cacgcccacg ctcgcgctca ggcgatgcgc caggtcgcca
      481 aggcgtgttg ccaccagccc caaccagtga cgcaggctat cgatacggac aaagaacctg
      541 ccctcgcggc gactgggatc ctcgagcagc gccagatagc gtttcagggc ctcgatcccc
      601 tctcggtact ggctttcggt cgtcgggaat atccaggact cgttgttgaa atgaaactgg
      661 gggtcggcga ttgcgaggtt ccggtcttcg atcgattgcg tctgcgaacg gctaaaatcg
      721 ttgcgcagca ccctggtgag atcccggacc tgcaccagcg ccccatattc ccagttaggt
      781 atgttgtcca gccacaggga gatagggtta atgtcgttgg agaggaaacc tcctcgcttc
      841 tcaagtagcg tagaggctac ttcgatcagg gtggccgtgg tcacagcgcc ggggacaagc
      901 gttttcgggt cattccccga ctgccgtaag gccatctccc ggatgtcaaa gacggccggt
      961 tcgatgctcc aatacgatcc cagcccaaaa aagacaacag cggccgccac gagcggggtg
     1021 acaagatgcc tcaacaggcc gcgaagtctt tgagaaactg gctgtagtgg tcttttcagt
     1081 accggctcaa gcatatatac tcgcctccat cgtgttccag tgttcaattc tgattcatca
     1141 agccgcaaga tgcccgtgcg cgagttaagt cgggccatgc ccttcctctt cccgtcttaa
     1201 agaccac
//
LOCUS       DASQSL010001754         1279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_149365, whole genome shotgun sequence.
ACCESSION   DASQSL010001754 DASQSL010000000
VERSION     DASQSL010001754.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1279
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149365"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..827)
                     /gene="lpxK"
                     /locus_tag="VE844_17725"
     CDS             complement(<1..827)
                     /gene="lpxK"
                     /locus_tag="VE844_17725"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: protein motif:HMM:NF014645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HZC03123.1"
                     /translation="MSTLWRAFLEGKAGPLARWTLGPLLTTLSYPYGWAHQLRLQAYH
                     RRWLTVKRLPCRVISIGNLTLGGTGKTPMVEAVANLLRQEGLRVGILSRGYGGSSRAA
                     LSVVSDGEKCLLSPDVAGDEPVLLAERLPGVPVLVGRNRYAAGMLAVERFSVEVIVLD
                     DGFQHVQLARDLDILLLDASRPLGNGRLFPRGDLRERPTALARAHATVFTRWNPDSTH
                     SSTAPKLPPLTPPIFYSQHKPLDLRVLNDGQILLLTALKGRRILACCGIGAPDHFRQT
                     "
BASE COUNT          292 a          338 c          383 g          266 t
ORIGIN      
        1 gtctggcgaa agtgatcggg tgccccgatg ccacagcatg ccagaatgcg ccgacccttg
       61 agcgctgtca gtagcaggat ctgtccatcg ttcagcacac ggagatccag gggcttatgc
      121 tgactataaa agatgggagg agtcagtggc gggagtttcg gagcagtgct tgagtgcgtg
      181 ctgtcagggt tccagcgggt gaacacagtc gcatgggcac gtgccagggc tgtcgggcgc
      241 tcacgcaaat ccccgcgcgg aaacaatcgt ccattgccga gcggtctgct agcatcgagc
      301 aagaggatat cgaggtcgcg cgccaattgc acgtgttgga agccatcgtc aagcacaatg
      361 acctctacgc taaagcgttc gacggcaagc atcccagcag cgtaacggtt ccgtcctacc
      421 agcactggga ctccgggtag acgctctgcc aagagcaccg gctcatcacc ggcgacgtcg
      481 ggcgatagga ggcatttctc tccatctgag acgacggaaa gggctgctcg agagctacca
      541 ccatagccgc gactcaggat gccgacgcgt agtccctctt gccgtaatag gttggcaacc
      601 gcctcgacca taggggtctt gccggtgcct cccaacgtga ggttgccgat gctgatcacg
      661 cggcagggga gtcgtttgac ggttagccaa cggcgatgat acgcctgtaa cctaagctga
      721 tgcgcccatc cgtatggata gctaagagtc gtcagcaacg ggccaagcgt ccagcgggca
      781 agaggaccag ccttcccctc gaggaaggct ctccacaggg tgctcaaggg cctcatccgc
      841 gtgtcatctc cgtgtcaccc cgaaattaca tgccatgtcg cagcgcttga gacgcaaggc
      901 agtcatacta ctgagcaggt cgagaggact acttggttag tgtgacccat tctgtattaa
      961 tgtcaaccga tattcgctgt accgactaat caccagccca gagcgggtca tgcgcgttcg
     1021 actgacaatg atatactaga aatatgtaat acaaagtcta ttccagcaat gttggcaatg
     1081 gcaaatgggc ctttgttgtt ggtattggca agcatgttgt gcgggggggg cgcggaatta
     1141 atggtgcaga gtgcgtaata cgcttagggt aatacagatg cttgtatcct aggggtagct
     1201 gctgtgccag tgtcatctgg agcgatttag cctctcgcac cgctaacagc agcaagaaag
     1261 ttgaggggag tgacattat
//
LOCUS       DASQSL010001755         1044 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_149367, whole genome shotgun sequence.
ACCESSION   DASQSL010001755 DASQSL010000000
VERSION     DASQSL010001755.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149367"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            405..>1044
                     /locus_tag="VE844_17730"
     CDS             405..>1044
                     /locus_tag="VE844_17730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03124.1"
                     /translation="MIKTENQSVAVRGSRDSNDLVPLHQPFDIARRGFNQRQVLDHLE
                     SLDGRIALIDADRDATLAQVAELSRVLDHLRREAEEATAQLERILQEPMAEAGTRIQR
                     ILQLVAEEAAEVKAHAEAEISASKDRADQDIAELKVRTNDQITALRAQASHEAKSLLD
                     DARRQCDHLESKSAARRKAAEQAIAQREAEVNERIRKSELRSLAGLHLMVRVM"
BASE COUNT          252 a          302 c          299 g          191 t
ORIGIN      
        1 ttcgcagtag caagtcaacc tgcgtgctcg cgtcgtcacg ataacgactg caaattggcc
       61 cagtcgctaa ccaccgcttg tcacacgtat tgcgctaatg gtagcggtga agtaaggtcg
      121 atggcgcacg gcgccaacgc gcctggaggt gcattacatg cagtacgtca atccctggtg
      181 gcatagtcga aaacttacga ctatcttgag caagtggcga agtagcgaca aactagccat
      241 caataaagac cggccctggg atttcctcac caacattggt actaccatat ttctagccat
      301 caggagctgc tttcgcagtc gtaacactgt gggcatggat tatatcgatc agcatcacga
      361 ctttactgtt tatgctgcac tctctacctt agaggcctac gaagatgatc aagacggaaa
      421 atcaatctgt ggctgtgcgc ggatcccgag atagcaacga cttggttccc ctgcaccaac
      481 cctttgacat agcgcgacgc ggattcaacc aaagacaggt gctggaccac ctcgaatcgc
      541 tggatggtcg catcgcgcta atcgacgccg atcgggatgc caccttggcg caagtcgccg
      601 agctcagcag ggttctggat catctgcgcc gggaggccga ggaggcgacc gctcagctgg
      661 agcgcatctt gcaagaaccc atggctgagg ccggtacccg gatccagcgc atcctacagc
      721 tggtcgcgga agaggcggcc gaagtcaagg ctcacgccga ggcagaaatc agcgcgagca
      781 aggaccgcgc tgaccaggac atcgccgagc tgaaagtccg caccaacgac cagatcacag
      841 ccttgcgagc ccaagccagc cacgaggcca agtcactgct tgacgatgct cgacggcagt
      901 gtgatcatct tgagtcgaaa tccgctgcac gccggaaggc cgccgagcaa gcgatcgcgc
      961 aacgtgaggc cgaggtgaac gaacgaatcc ggaagagcga gctgcgcagc ctcgcgggct
     1021 tgcatctcat ggtgcgagtg atgg
//
LOCUS       DASQSL010001756         1332 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_136554, whole genome shotgun sequence.
ACCESSION   DASQSL010001756 DASQSL010000000
VERSION     DASQSL010001756.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1332
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136554"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1108)
                     /locus_tag="VE844_17735"
     CDS             complement(<1..1108)
                     /locus_tag="VE844_17735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03125.1"
                     /translation="MSPAKRYANKQAKASRRRRLNAQQRLERDRRQAQQAAEALHQAL
                     EDLSLPETLVREIEGRLQSQQKLLSKIVGVMFPALFGCRTPSELCRVRGWDKNWPSRL
                     LHALPKRSWLKRLRRLGLEVLVPLWRHVAGKSEASQSRWQWTWAVDDSVFHKYGEQLG
                     LVGHWWSGQQHRVLAGIDGLLLVVVIGDGKLVVPVDFAVRRPDSIGAGGPCRDKLGWT
                     REMIDARLLALSKRGLHLPAPIIPADSWFSDSKLMEHVRHRHQGTLVVEGKVSYTFTL
                     ADGRHVNGHDLLEGKRDKWSWRTHPWAPSVCYVRLQATSPTYGAVTVVIVDEHGKDRY
                     YLLCLETALSGPVLIRRWRRRHWIEFIFRVLKHLL"
BASE COUNT          302 a          414 c          341 g          275 t
ORIGIN      
        1 ccaacaggtg cttgagcacc cgaaagataa attcaatcca gtgacgccgc cgccatcttc
       61 gaatcaagac cgggccactc agcgccgtct ctaaacacag caagtagtag cgatcttttc
      121 catgctcatc cacgatcacc acggtgaccg caccgtacgt gggactcgtc gcttgtaagc
      181 gcacatagca cacgctaggc gcccagggat gcgtgcgcca tgaccacttg tcccgcttgc
      241 cctctagcaa atcgtgtccg ttgacgtggc gcccatcggc caaggtgaag gtataactga
      301 ctttcccctc gactaccaac gtgccttgat gccgatggcg gacatgttcc atcaacttgg
      361 aatcactgaa ccaactatcc gctgggatga tgggcgcagg caggtgcaag ccgcgcttgc
      421 tcaaggccaa caggcgcgca tcgatcatct ctcgcgtcca acccagtttg tcccggcaag
      481 gtcctcccgc cccaatggag tcaggccgcc gtacagcaaa atccactggc accaccaact
      541 tgccatcgcc aatcaccacg actagcaaaa gaccatcaat gcccgccagt acgcggtgtt
      601 gctgaccact ccaccaatgc ccgactaacc ccagctgctc accatatttg tggaagaccg
      661 agtcatcgac ggcccaggtc cactgccagc gactttggct cgcttcgctt ttgcctgcga
      721 catgtcgcca aagcggcacc agaacctcaa gacccagacg ccgcagccgc ttgagccaag
      781 agcgtttggg caaagcgtgc aacagacgcg aaggccagtt cttgtcccac ccgcgcaccc
      841 gacagagctc cgagggcgtg cgacagccaa agagagcggg aaacatgaca cccacgattt
      901 tgctcaacag cttctgctga ctctgtaagc ggccttcgat ttcacgcacc aacgtctcag
      961 gcaggctcaa gtcctccaga gcttgatgca aggcttcggc ggcctgttgg gcttggcgac
     1021 ggtcgcgctc gaggcgctgc tgagcgttga ggcgacggcg ccggctggct ttggcttgtt
     1081 tgttggcgta tcgtttcgcg ggggacatga tgatttcctt tgtatcgtgg tgagttgata
     1141 cgtgatagaa aggaaaccat gtccccccgt gtctcgattt caagccgacc catgaaagga
     1201 gggcatatgc cttccgtgat ttgtataatc cctttgttat aaataacttt cacgagccgt
     1261 ccggcgggaa cccgtgtcaa tacttgatga aatttaaatt cggaatagcc agcaacttat
     1321 atcacgcgat ca
//
LOCUS       DASQSL010001757         1269 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_80099, whole genome shotgun sequence.
ACCESSION   DASQSL010001757 DASQSL010000000
VERSION     DASQSL010001757.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1269
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80099"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            98..>1269
                     /locus_tag="VE844_17740"
     CDS             98..>1269
                     /locus_tag="VE844_17740"
                     /EC_number="2.5.1.76"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006104219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteate synthase"
                     /protein_id="HZC03126.1"
                     /translation="MQNAKYRRKMNYEAARTYAGRMVSKALDSLPHYKLRCQGCGGTF
                     EDAGFILECPAQHEPALLVTEYRGKRFEPDTRAEGMFRYRKWLPGTRVLSSAGSSVTY
                     KSEQLNRIIGLPNVWVVFNGYWPEKGATLETTTFKDLEAWSVLSRIPEQHEGVLVVAS
                     AGNTAAAFAKACSLNKVPCLIIIPEAGLPNLQFPGVIDPGVKIISLSGFSDYFDAITL
                     ADRVSRIDGFFPEGGVKNIARRDGLGTTVLNAVETIGQMPRYYFQAIGSGTGGIAAYE
                     AAKRLAEDGRFGKKPPRLMLSQNLPYVPIYMTWKSCRRELEISDDDAKKQIQQIAAHV
                     LSNRRPAYSIRGGIFDVLTETQGDMLTADNLETLHAKQLFEETEGIDIDPASAVTFA"
BASE COUNT          296 a          341 c          377 g          255 t
ORIGIN      
        1 acggttgact atgctcaacg attgcctata cttttagctt ctgttctaag gataggcttc
       61 gctctgtgac taccgagtga ggatacagcg tgaccttgtg cagaatgcca agtacaggag
      121 gaaaatgaac tacgaggcag cacgcactta cgcgggacgc atggtgtcga aggcgctcga
      181 cagcctccct cactataagt tgcgatgtca aggctgcggc gggacgttcg aggatgccgg
      241 gttcatccta gagtgcccag cgcaacacga gcctgctctc ctggttacag aatacagggg
      301 caaacggttc gaacccgaca cgcgtgccga agggatgttc aggtacagga agtggctgcc
      361 aggtacacgg gtcttgtcaa gcgcgggcag cagcgtgacc tataaaagcg aacaactgaa
      421 ccgcattata gggctgccca acgtgtgggt ggtgttcaac gggtattggc cggaaaaagg
      481 cgctacactt gaaacgacga ccttcaagga cctggaggcg tggtcagttc tctctcgtat
      541 cccggagcag cacgagggag ttctcgtcgt ggcctcggcc ggcaacaccg ctgctgcgtt
      601 cgcaaaggcc tgctcgctga acaaggtccc ctgcctgatc atcattccgg aagctggact
      661 tcctaatctg cagtttcctg gggtcatcga cccgggcgtg aagattatct cccttagcgg
      721 attctccgac tatttcgacg ccatcacgct ggcggatcgc gtctcacgaa tcgacggatt
      781 ctttcccgaa ggaggcgtga agaacattgc gcggcgcgac ggattgggca cgacggtgct
      841 gaacgcagtt gagacgatcg ggcagatgcc ccgctattac tttcaggcaa tcggaagtgg
      901 gacgggcggc atcgcggcat acgaggccgc aaagaggctt gccgaggatg gaagatttgg
      961 caaaaagcca ccaaggctca tgctgagcca gaatctgccg tacgttccga tttacatgac
     1021 ttggaagtca tgccgacgcg agctggagat cagtgatgat gacgcgaaga agcagataca
     1081 acagattgcc gctcatgtgc tgtcgaatcg gcgaccagcc tactccatca gaggcggaat
     1141 cttcgatgtc cttaccgaaa cccagggcga catgctcacc gctgacaacc tcgagaccct
     1201 tcacgcgaag cagttgttcg aagagaccga agggatcgat atcgatccgg cgagcgctgt
     1261 tacgttcgc
//
LOCUS       DASQSL010001758         1436 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_106947, whole genome shotgun sequence.
ACCESSION   DASQSL010001758 DASQSL010000000
VERSION     DASQSL010001758.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1436)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1436)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1436
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106947"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1436
                     /locus_tag="VE844_17745"
     CDS             <1..>1436
                     /locus_tag="VE844_17745"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZC03127.1"
                     /translation="RETHISYILLTGPYAYKFKKPLDLGFLDFTTLEKRKFYCEEELR
                     LNRRLAPALYLTVVPITGTESSPHVGGSGPAIDYCVKMVQFSADAELDRVLERGQLST
                     RHIDDLAAQIAHFHQQSAVAGADSAFGTPAEVGRFALENFDQISLDTAYPPEIQQHLA
                     FLRTWTVQQLEKLEPVLDKRKRDGWIRNCHGDMHLTNMALVDDHIVVFDCIEFNESLY
                     WIDVINEIAFLLMDLDDRGRSDLAHRFLNRYLERTGDYAGLGLLDLYRVYRSLVRAKV
                     AQIQYRQLRPEAEERQACQQRFMRHLALADRYTNKPAPVPLIITYGFSGSGKTWLTDK
                     LIDLTGAIRLRSDIERKRLAGLGAEARTDSRIGADLYQPAMTNYTYERLRALAREVLA
                     SGFPVMVDAAFLKYRQRDAFSQLAATLGAPFYILHLQAREATLRERIRQRRIVGEDAS
                     EATLAVLDYQLRANEPLTDAERERTVQI"
BASE COUNT          305 a          411 c          397 g          323 t
ORIGIN      
        1 tcgcgaaacc catatctcct atatcctgtt aacggggccc tatgcttata aattcaagaa
       61 accgctggat ctcgggtttt tggatttcac cacccttgag aaaaggaagt tctactgtga
      121 ggaggaactc cgcttaaacc ggcgtttggc tcccgcgctt tacctcacgg tggtcccaat
      181 caccggcact gaatcatcgc ctcatgtagg tgggagcgga ccggccatcg actattgcgt
      241 caagatggtg caatttagcg cagacgccga gctcgatcgg gtgttggaac gcgggcaact
      301 gagcacccgc catatcgatg atctcgccgc gcagatcgca cactttcatc agcagagcgc
      361 agtagcaggc gcggatagcg cctttggcac gccggctgaa gtcggcaggt tcgccttaga
      421 aaattttgac cagatctctc tggatactgc ctatcctcct gagatacagc aacacctcgc
      481 ttttctgcgc acttggacag tccagcaact ggaaaagctc gagccggtgc tcgataagcg
      541 caagcgcgat ggatggatcc gcaactgtca cggcgatatg catctcacca atatggcgct
      601 tgtcgacgat cacatcgttg tcttcgattg tatagaattc aacgagtcct tgtactggat
      661 cgatgtcatc aatgagatcg cctttttgct tatggatctg gatgaccgcg gccgctctga
      721 tctggctcat cgctttttga atcgttatct cgaacggacg ggcgactatg ccgggcttgg
      781 gcttttagat ctttatcgcg tctaccgatc cctggtgcgt gccaaggtcg cccagatcca
      841 ataccggcag ttacgccccg aggcagagga gcgacaggca tgccagcaac ggttcatgcg
      901 ccacctggca ctggcggatc gctatacgaa taagcctgcg cctgtccctc tgatcatcac
      961 ctacggcttc tccggctcag gtaagacttg gcttacggat aagctcatcg acttgaccgg
     1021 cgcgatccgc ctgcgatcag acatagagcg caagcgttta gcgggccttg gggcagaggc
     1081 caggactgac agccgcattg gcgcggatct ttatcagccg gcaatgacca actataccta
     1141 cgagcggttg cgtgcgctcg cccgtgaggt cttggcgagc ggtttcccgg tcatggtcga
     1201 tgcggcattt ctcaaatacc ggcagcggga tgccttcagc caactcgctg ccacgctcgg
     1261 tgcacccttc tatattcttc atcttcaagc ccgagaggcg accctgaggg agcggatcag
     1321 acaacgccgg atcgtggggg aagacgcttc ggaggcaacg ctcgcggtgc ttgactatca
     1381 gctccgggca aatgagcctt tgactgacgc agaacgtgag cggacggtcc aaatcg
//
LOCUS       DASQSL010001759         1501 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_27130, whole genome shotgun sequence.
ACCESSION   DASQSL010001759 DASQSL010000000
VERSION     DASQSL010001759.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1501
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27130"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..770
                     /locus_tag="VE844_17750"
     CDS             <1..770
                     /locus_tag="VE844_17750"
                     /inference="COORDINATES: protein motif:HMM:NF017388.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PilC/PilY family type IV pilus protein"
                     /protein_id="HZC03128.1"
                     /translation="ASGPFRKRSILLGDIINSDPWFVGTENFGYHRLPSPEGPVYTTF
                     RNGSSYTGRRKMVYVGANDGMLHGFDAANDTTNGGKEIFAYIPDAIIGKLSKLTDPTY
                     GATTNPHQYFVDGAPKAGDAYINGAWKTLLAGTLGAGGKGVFVLDVTNPDGFDATDVL
                     WEVTDTTGPEYADLGYTLPQPSIVRLANGDWGVIVANGYDSASKKAVLYILDAENGSI
                     IKKFDTLVGLCCINPLDAERALEGLLLCGHSVTLRHA"
     gene            complement(735..>1501)
                     /locus_tag="VE844_17755"
     CDS             complement(735..>1501)
                     /locus_tag="VE844_17755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011714364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZC03129.1"
                     /translation="CTLTLRGVYHLPLRGTQGLLESLLDLMGLELHAPDYTTLCRRQG
                     GLEVSLPRQEQGKALHVVVDATGLKVYGEGEWKVRQHGYTKRRTWRKLHLGVDEGSGE
                     VVATVLSTNNVGDSEVLADLLDQIDEPIEQLSADGSYDTWEIHADLQHRGIRAAIPPR
                     KTARIRQRKNSHEPPLPRDEALRAIRKKGRALWKREAGYHRRSLVENAIFLKKVFGDK
                     LAARLFDHQATEAFLRCRALTRMTQLGMPESYAVAA"
BASE COUNT          307 a          458 c          402 g          334 t
ORIGIN      
        1 aagctagcgg cccgttccgc aagcggagta tcttgttagg cgatatcatc aactccgatc
       61 cctggtttgt cggcacggag aatttcggtt atcaccgctt gccgtcccct gaaggccccg
      121 tctacacaac attccgcaac ggttcttcct acaccggacg ccggaagatg gtttatgtcg
      181 gcgccaacga tggtatgttg cacggattcg atgcggccaa tgacaccacg aacggcggca
      241 aggagatctt tgcctatatc ccggatgcga ttattggcaa gttgagcaag ctgaccgatc
      301 ccacctatgg cgcaactacg aatcctcatc aatactttgt cgatggtgcg cccaaggcgg
      361 gcgatgcgta tattaacggc gcatggaaga ccctcctggc gggcacgctg ggcgcaggcg
      421 gcaaaggtgt gtttgtgctc gatgtcacca atccggatgg tttcgacgcc accgacgtac
      481 tttgggaagt tactgacact acgggccctg agtatgccga tctgggttac acactgccgc
      541 agccttctat cgtccgcctg gctaatggcg attggggagt gattgtcgcc aatggctatg
      601 acagcgcgtc gaagaaagct gtcttgtata ttctcgatgc ggaaaacggc agcattatca
      661 aaaaatttga caccctcgtt gggctttgtt gcataaatcc tctcgacgcc gagagagctc
      721 ttgagggtct actcttatgc ggccacagcg taactctccg gcatgcctag ctgggtcatc
      781 cgagtcagcg cccggcagcg cagaaaggct tctgtggcct gatggtcgaa gaggcgcgca
      841 gcgagcttgt caccgaacac ctttttcaga aagatggcat tctcgaccag gctgcgccgg
      901 tgataacccg cctcccgctt ccataaggcc cggcctttct tacggatggc gcgtagcgcc
      961 tcatcgcggg ggaggggtgg ctcgtgagag ttctttcgct gacgtatgcg ggccgtcttg
     1021 cgtggtggaa tcgcggcccg aataccccgg tgctgtaagt cagcatgaat ctcccaggta
     1081 tcatacgacc catcggccga gagctgttca atcggctcat cgatttggtc gagcaagtca
     1141 gccaacacct cgctatcacc cacgttattc gtactcaaca ccgtggccac gacctcaccg
     1201 ctgccctcat cgacacctag atgcagctta cgccatgtcc gccgcttggt atagccatgt
     1261 tggcgcactt tccattcgcc ttccccgtag accttcaacc cggtggcatc caccactaca
     1321 tggagcgctt tcccctgttc ctgtcgcggc aagctcacct ccaagccccc ttgccgacga
     1381 cacagcgtcg tgtaatccgg cgcgtgcagc tccaggccca tcagatcgag taacgactcc
     1441 agaaggccct gtgtccctcg caacggcaag tgatacaccc cccgcaacgt cagtgtacat
     1501 t
//
LOCUS       DASQSL010001760         1055 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_199731, whole genome shotgun sequence.
ACCESSION   DASQSL010001760 DASQSL010000000
VERSION     DASQSL010001760.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199731"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(150..872)
                     /locus_tag="VE844_17760"
     CDS             complement(150..872)
                     /locus_tag="VE844_17760"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HZC03130.1"
                     /translation="MAGILEGKVALVTGVSGDGQVGQAVAKALAQQGAVLGIVARRQQ
                     NVEARAEELRSMGARVLGLPADLTDEAQVRQVVERMMSEYGKIHILVNLAGGLTRYKP
                     ATEHSLEDWQQEVGNNLLTAFLCSRAVFPHMRDGGGGTIINFARASLPQANMVAYNCA
                     KAGIEALTRTLALEGRDVAIRVNAVAPGLVDTESNIAAMKPKDLKRWTKREDIAQATV
                     FLASDASVGITGHVLPITGWGI"
BASE COUNT          199 a          328 c          281 g          247 t
ORIGIN      
        1 ccggtccggt ggcgatccgc tggatgatag accgcatgag aatggctgga tcgggtggta
       61 gggtttcggt tgggccacgc atggttactt ccgggtagct tcctgtttct tgagcttaag
      121 cagtcaccct aacccgcggc atgtaatggc tagatccccc agcccgttat gggaagcacg
      181 tgccctgtga tccccacaga ggcatcggac gctaggaaaa ccgttgcttg ggcgatatcc
      241 tcacgtttgg tccagcgctt gaggtctttg ggcttcatgg cagcgatgtt ggactcggtg
      301 tccaccagtc ccggcgccac cgcattgacc cgaatggcca catctctgcc ctctagagct
      361 agcgtgcgtg tcagggcttc tatgccagcc ttggcgcagt tataggcgac catattggcc
      421 tgcgggaggc tggcccgggc aaagttgatg atggtgccac ccccgccatc ccgcatgtgg
      481 ggaaagaccg cacgcgagca caaaaaggcg gtgagcagat tgttcccgac ctcctgctgc
      541 cagtcttcaa ggctatgctc tgtcgcgggc ttgtagcgtg tcagaccgcc tgccagattc
      601 accaggatat ggatcttgcc gtactcgctc atcatgcgct cgaccacttg gcggacctga
      661 gcctcatcgg tcagatccgc aggcaacccg agcactcgtg cacccatgct acgtaactct
      721 tcagcccgcg cttctacatt ctgttgccgg cgcgcgacga tcccaagcac agcgccttgc
      781 tgcgccaagg ccttcgccac cgcctgtcca acttgtccgt ccccgctgac gcccgtcacc
      841 agggcaacct ttccttcaag aatgcctgcc attttgtttt cctctttcct gatgtgatag
      901 gtatgatcca agatcagatc cgctatgccc ccagcttcat gttcccgatt gtaacgtttg
      961 cgctcaccat tgacgagtac ctagttagag cgtgtcgcac aaagagagct tctcaaccta
     1021 aaccgagttg aaaagctctc cctctttcag tatta
//
LOCUS       DASQSL010001761         3136 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_80125, whole genome shotgun sequence.
ACCESSION   DASQSL010001761 DASQSL010000000
VERSION     DASQSL010001761.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3136
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80125"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2520)
                     /gene="gcvP"
                     /locus_tag="VE844_17765"
     CDS             complement(<1..2520)
                     /gene="gcvP"
                     /locus_tag="VE844_17765"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005371279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HZC03131.1"
                     /translation="MPDPKRSLTELEMRGDFIRRHIGPDQQQIVEMLEFLGLDFLEAL
                     VDRAVPASLLSDEPLDLPPPMSEREVLSYMRRMRERNKVFISLIGMGYYGTIMPTVIK
                     RNVLENPGWYTAYTPYQAEVSQGRLEALLNFQQMIIDLTGMELANASLLDEATAAAEA
                     MTMSRRLSKSSSNLYFIDRDCYPQTIAVVKSRAYPLGFEVIVGDPFTELPGHELFGVL
                     LQYPGSGGEVRDLRATIEAAQSQQALVTVAADLLSLVLLKPPGELGADIVVGSTQRFG
                     VPMGYGGPHAAFFATRDAYKRSVPGRIIGVSIDTRGQPAYRMALQTREQHIRRDKATS
                     NVCTAQALLANIAGFYAIYHGPEGLKLIAGRVHRLTQILVVGLMRLGFEVVNRAYFDT
                     VTVKVPGRARRIAARARESRLNLRVVDADHLGIAFDETTTREQLRTLWRVFSTQADTL
                     LDIEALDAKVEECISEVLRRKSAFLTHPVFNLYHSETEMLRYLRRLAAKDIALDRAMI
                     PLGSCTMKLNATTEMQALSHREFSALHPFAPLDQTQGYQQLFEELEEMLCRITGFDAF
                     SLQPNAGSQGEYAGLLVIRKYQETRGEGHRNVCLIPASAHGTNPASATMAGLKIAVVD
                     CDEHGNVEVADLKAKAMQHREDLAALMITYPSTHGVFEEAFVEICAIIHECGGQVYMD
                     GANLNALVGLCQPGRIGADVAHINLHKTFCIPHGGGGPGVGPIGVRAHLAPFLPDHPV
                     VGGVNPAAGKDGTIGPVAAAPWGSASILTISWAYIAMMGGEGLRRATLVAILNANYMA
                     RRLAPYYPILYTGKNGMVAHECIIDLRPIKASSGITVDDVAK"
     gene            2664..3095
                     /locus_tag="VE844_17770"
     CDS             2664..3095
                     /locus_tag="VE844_17770"
                     /inference="COORDINATES: protein motif:HMM:NF016246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 family protein"
                     /protein_id="HZC03132.1"
                     /translation="MAIHFTKTVYDPPEPEDGVRLIIMRRYPRGVAKARAHAWLPQLA
                     PTLPLVHWYHAQKKAIEAAWKKTDPERFEQELARFWRTYTRRYLSEMREQRTLIEFIA
                     SLTLDFGVTLTLLCACPDHRLCHRSLLAQLIEEVPPRRNPR"
BASE COUNT          669 a          940 c          902 g          625 t
ORIGIN      
        1 cttggcgaca tcgtcgaccg tgataccact cgacgccttt ataggccgga gatcgatgat
       61 gcattcgtgg gccaccatcc cattcttgcc ggtgtagaga atgggataat acggtgccag
      121 acgcctggcc atatagttgg cattcagaat cgccacgagc gtcgcacgcc tgagcccctc
      181 gccccccatc atcgcgatgt aggcccagga gatcgtcaag atgctggccg aaccccaggg
      241 cgccgcggcc accggtccaa tagtgccgtc ctttcccgcc gccggattca cgcctcccac
      301 cacggggtga tccgggagga aaggggccaa gtgggcgcgc acgccgatag gacctacccc
      361 aggcccaccg ccaccatggg gtatgcagaa ggtcttgtgc aggttgatgt gggccacatc
      421 cgcaccaatg cggccgggtt gacagagccc caccagggca ttgaggttgg ccccgtccat
      481 gtacacctgc cccccgcatt catggatgat ggcacagatc tccacaaacg cctcctcgaa
      541 taccccgtgg gtcgagggat aggtgatcat cagggccgct aggtcctccc ggtgctgcat
      601 cgccttggcc ttgagatccg ccacctccac attaccgtgc tcatcgcagt ctaccactgc
      661 gatcttaagg cctgccatgg tggcacttgc gggattggtg ccatgggctg aggccgggat
      721 caggcataca ttacggtgac cctccccccg ggtctcctgg tacttgcgga taactaagag
      781 ccccgcgtat tcaccctgag atccggcatt gggctgcagt gaaaaggcat cgaacccagt
      841 gatcctgcac agcatctcct ccagctcttc gaagagctgc tggtaaccct gggtctgatc
      901 caggggtgcg aacgggtgca gcgcactgaa ctcgcggtgg gatagggcct gcatctcggt
      961 cgtggcattg agtttcatgg tgcacgaacc cagcggaatc atcgctcgat cgagcgcgat
     1021 gtccttggcc gcaagccgtc ggagatagcg caacatctcg gtctcggagt ggtagagatt
     1081 gaacaccggg tgggtgagaa acgcgctttt acggcgtagc acctcggaga tgcactcctc
     1141 gactttggca tccagcgcct cgatgtcgag cagggtatcg gcctgggtgg aaaatactcg
     1201 ccacagggtg cgcagctgtt cacgggtggt cgtctcgtca aaggcgatgc ccaggtggtc
     1261 ggcatccacc acgcgcagat tgaggcgaga ttcgcgtgcg cgagcagcga tgcgacgggc
     1321 acgccctggg accttgacag tgaccgtgtc gaaataggcg cgattgacta cctcaaaccc
     1381 gagtctcatg agacccacaa ccaagatctg ggtcagacga tgaacccgcc cggcgatcag
     1441 tttcaaacct tccgggccgt ggtaaattgc atagaaaccg gcaatattgg cgagcagcgc
     1501 ctgtgccgtg cagacgttgc tcgtggcctt atcccggcgg atgtgctgct cacgggtctg
     1561 caaggccatc cgataagcag gttggcccct ggtatcgatc gagacaccga tgatccgacc
     1621 gggtaccgag cgcttgtaag catctcgggt cgcgaagaag gcagcgtgcg gcccaccgta
     1681 ccccatgggc accccaaaac gctgggtact gccgacgacg atgtcagccc cgagctcacc
     1741 gggtggtttg agcaacacca ggctcaacag atcggccgcc accgtgacca gcgcctgttg
     1801 tgactgggct gcttctatcg tggcgcgaag gtcgcgtacc tcgccacctg aaccaggata
     1861 ctgcagcaac acgccgaata gctcgtggcc tggtagctca gtgaagggat cgcccactat
     1921 cacctcaaag cccaacggat acgcccggct cttaactact gcgatagtct gggggtaaca
     1981 atcgcgatcg ataaaataga ggtttgagct gcttttagaa agacgtcgcg acatggtcat
     2041 cgcctcagca gcggcagtcg cttcatccag caatgaggca ttggcgagct ccatcccggt
     2101 gagatcgatg atcatctgct ggaagttgag cagcgcctcc aggcgcccct ggctgacctc
     2161 agcttggtag ggggtgtagg ccgtatacca acccgggttt tccagcacat tgcgcttgat
     2221 gacggtcggc atgatggtgc cgtagtaacc catgccgatc agggagatga agaccttatt
     2281 gcgctcacgc atccggcgca tatagctcag tacctcacgc tcgctcatgg gtggcggcag
     2341 gtccaggggt tcatccgaga gcaggctggc aggaaccgcc ctatcgacca gggcctcgag
     2401 gaaatccaac cctaggaatt cgagcatttc cacgatttgc tgttggtccg ggccgatgtg
     2461 gcggcgaatg aaatcaccgc gcatctcaag ttctgtcaaa gatcgcttgg gatctggcat
     2521 ggtagttggt cctctcgaca acagtcacag ggactatgat aaacctctgc ctattctacc
     2581 gcagtcggac atgaaacccc tcatctgcga aacgccgaaa tctgatataa ctatgggcac
     2641 agtattaaaa tagagttaac cttttggcaa tccacttcac caagaccgta tacgatccgc
     2701 ctgaacccga agacggcgtt cgccttatca tcatgcggcg ttacccacgt ggggttgcca
     2761 aggcacgggc ccatgcctgg ttgccccagc tggctccgac gctgccgctg gtccactggt
     2821 atcatgcgca aaagaaagcg atcgaggctg cgtggaagaa aacggatccc gagcgcttcg
     2881 aacaagagtt ggcccgtttc tggaggacct acacccgacg ctatttaagc gagatgcgag
     2941 agcagcgcac ccttattgaa tttatagcct cactcactct tgacttcggt gtcaccttga
     3001 ccctgctctg cgcttgtccc gatcaccgcc tctgtcaccg cagtctcttg gctcagctga
     3061 ttgaggaggt gccacctcga cgaaacccca gataggggat agcatcacta tagtcagctt
     3121 catgaaaaga tgagaa
//
LOCUS       DASQSL010001762         1043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_199750, whole genome shotgun sequence.
ACCESSION   DASQSL010001762 DASQSL010000000
VERSION     DASQSL010001762.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1043
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199750"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            175..944
                     /locus_tag="VE844_17775"
     CDS             join(175..511,511..944)
                     /locus_tag="VE844_17775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611655.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZC03133.1"
                     /translation="MDLTDEQWAILEPLLPEPERRWEGRGRPWRPAREVLNGVLWVLR
                     TGAPWHDLPERYPPYQTCHRRFQTWVHDGTLEGILKALAQDLKERGGLDLTECFIDGT
                     FIVAKKGGNRLGKTKRGKGTKLMAVADRSGLPLPACTASAAPHEVTLVEATLEARLVA
                     EAPERLIGDKAYDSDQLDAALGEQGIEMIAPHRQNRKKPTTQDGRALRRYKRRWKVER
                     LFAWLGNFRRLVVRYEHHADNFLGFIRLGCIIILLRHL"
BASE COUNT          236 a          271 c          315 g          221 t
ORIGIN      
        1 tatagaaaga aaaaagggga gtgagagtaa ttgagaaagc cctcaagcaa ttgggggctc
       61 tctttttgct caaactaaag agctttggga tatagctggg agctgattag aacccatctc
      121 ataaatagtg aggaagtggt aagctcatag ggagatactc caggggagct taccatggac
      181 ttgaccgatg aacagtgggc gattctggag ccattgcttc cagaaccgga aaggcgctgg
      241 gagggccgag gccgcccttg gcgacccgcc cgagaagtgc tcaacggtgt gctctgggtg
      301 ctacgtactg gcgctccttg gcatgacttg cccgagcggt atccgccata ccagacctgc
      361 catcgccgct tccagacctg ggtgcatgac ggtactctgg aaggaatcct taaggctttg
      421 gcccaagacc ttaaagaacg cggtggccta gaccttacag agtgcttcat tgatggcacc
      481 ttcatcgtcg ctaaaaaggg gggcaacagg tgggaaagac caagcggggc aaaggtacga
      541 agctcatggc agtggcagac cgctctggtc ttcctctccc cgcttgtacc gccagcgctg
      601 cgcctcacga ggtgacgttg gtggaggcta ctctggaggc tcggctggtg gcggaggcac
      661 cggagcggct gattggagat aaagcctatg actcggacca actggatgcc gccttgggtg
      721 aacaaggaat cgagatgatt gctccccatc ggcagaaccg caagaaaccc acaacccagg
      781 atggacgcgc cttgcgccgc tacaaacggc ggtggaaggt ggagcggttg ttcgcctggc
      841 tgggtaactt tcgccgcttg gtggtgcgct atgagcatca tgctgacaac ttcttgggtt
      901 ttatccgact cggatgcatc attattttgc ttaggcattt atgagatggg ttctagtact
      961 tttggctgcc tgtagcgcag cagccacccc gactccggcg tctccggagg ttaccatcgc
     1021 cccacaacct gagaccgcac cat
//
LOCUS       DASQSL010001763         2860 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_149419, whole genome shotgun sequence.
ACCESSION   DASQSL010001763 DASQSL010000000
VERSION     DASQSL010001763.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2860)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2860)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2860
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149419"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2441
                     /gene="mprF"
                     /locus_tag="VE844_17780"
     CDS             <1..2441
                     /gene="mprF"
                     /locus_tag="VE844_17780"
                     /inference="COORDINATES: protein motif:HMM:NF033480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional lysylphosphatidylglycerol
                     flippase/synthetase MprF"
                     /protein_id="HZC03134.1"
                     /translation="DVLQHFKELPAFSIILGFVVTAISYFVVTGYEVLVLHYLNRPIP
                     YPRAALASFLASAFGNNIGFALFTGASVRYRIYTPIGLSTLEIAGITAMCSLTTLLGI
                     SFIFALSMLLSTGTVAESAISLPLPLRRGIGIMILGAMAGYVIFTSIRPITLRSHDWA
                     LQLPSAKMASAQIALASFDLMLVGTLIYVLLPTHTGTNFFEFLGIFALALFAGSMSNV
                     PGGIGVFETVLIVGLPDTPTAALLGSILLFRCIYYLTPLGLAAVLLVAHEATQQRERF
                     AWIGNIAADWLAEFTPQVLGVLIIVGGIVLLFSGAVPPRVDRLALLRDTVPLPVLELS
                     HSLGSAAGLGLIILARGLSRRLYRAYYLSLALLAIGIVASLLKGLDYVEAITLSIILV
                     VVASSRTEFRRQASLFSQGFTLEWVSTLTIILAVTVWLGLFSYKHIEYTHELWWHFAY
                     EADLSRFLRSTVVIFVLIGGATLVNLLRSVPKPDRPEATELDHVRRIIEHESITRANL
                     ALLGDKRLLFSDSGSAFIMYQVQGKSWIALGDPIGPGDEHQKLLWAFRELCDRRGGWP
                     VFYLIDAEGLSRYVDLGLSLLKLGDEARVPLDRFSVEYGGTAVELRHLHDSIAARGFC
                     FEMVNSIKVPSLIPELKRVSDDWLATTHTQERGFSMGFFDPDYIANFPCALVRSNDHR
                     LVAFAILWASPNKEELALDLMRYHHDAPKGVMDYLLIELMRGGRARGYRWFNLGIAPL
                     SDLEAHPLAPLWHRIGRLMYRQSEHFRDLESLRRYEERLNPVWRPKYLASPGGLNTLR
                     ILRNITKLIARERK"
     gene            complement(2449..2787)
                     /locus_tag="VE844_17785"
     CDS             complement(2449..2787)
                     /locus_tag="VE844_17785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03135.1"
                     /translation="MTIAEIGHFSVFSLESVLESLAVWPFFALVVFGIIGFILMQMAY
                     FHGDVSVSVPLITMTQRPVTLFSGYFVFGEAFPPVKIVGILTILLGIVVITLSILKKS
                     DTAKAFPAVG"
BASE COUNT          566 a          803 c          760 g          731 t
ORIGIN      
        1 ccgatgtgct gcaacacttt aaagaactgc cggccttctc gattatcctc ggatttgtcg
       61 tcaccgcgat cagttatttc gtggtgaccg gctatgaggt tctggtgctg cattatctca
      121 accgtccgat cccctatcca cgcgctgcac tggcctcatt tctagcctcg gcctttggta
      181 acaatattgg ttttgccttg tttacgggtg cttccgtacg ctaccgcatc tacaccccta
      241 tcggcttgtc gacgctagag atcgccggaa taaccgcgat gtgctcgttg actaccctat
      301 tgggcataag ctttatcttc gcgctctcca tgctcttaag caccgggaca gtcgcagaat
      361 cggctatctc cctgccactt ccgctcaggc gcggcatcgg catcatgatc ctcggggcta
      421 tggcaggcta tgtgatcttc acctcgatcc gcccgatcac gctccgctct cacgactggg
      481 cgctgcaatt gccttccgcc aagatggcct cggctcaaat cgcgcttgcg agcttcgact
      541 tgatgctggt cgggaccctg atctacgtgc tgctgcctac ccatacgggg accaatttct
      601 ttgaatttct gggtatcttt gccctcgctc tgtttgctgg cagcatgagc aatgtacccg
      661 gtggcatcgg ggtattcgag acggtcttga tcgttggact ccctgacact cccacagccg
      721 ctttgctcgg ctccattttg ttattccgat gtatttatta cttgacccca ttaggtctcg
      781 ctgcagtgct attggtggcc catgaagcca ctcaacaacg agagcggttc gcttggattg
      841 gaaacatagc cgctgattgg ctggcggagt ttactccgca agtactgggt gtgctgatca
      901 tcgtcggcgg catagtactc ttgttctcag gcgctgtgcc gccacgcgtc gatcgcctcg
      961 cgctattgcg cgatacggtt ccgctcccgg tgctggagct ctcccatagc ttggggagtg
     1021 cggcagggct tggacttatt atcctcgccc gtggtttatc ccgccggctt tatcgcgcct
     1081 attacctgag cctagccctg ctcgctattg gaatcgtggc ttcgctcctg aaagggctgg
     1141 attatgtgga ggcgataacc ctcagtatta ttcttgtcgt ggttgcctcc tcccgcacgg
     1201 agttccggcg ccaggcttcg ctctttagcc aaggatttac cctggagtgg gtctccacct
     1261 taacgattat tctcgctgtg acggtctggt taggtctatt ctcttacaaa catatcgaat
     1321 acacccatga gctttggtgg cacttcgctt atgaggcaga tctttcccgg ttcctgcgct
     1381 ctacagtggt gatctttgtc ctgatcggag gcgccacctt agtcaatttg ctacgctccg
     1441 ttcctaaacc cgatcggcct gaggccactg agctcgatca cgtgcgccgc atcatcgagc
     1501 acgagtcgat cacccgtgca aaccttgcgc tgctcggtga caaacgcttg ttgtttagcg
     1561 actcgggaag cgcgttcatc atgtatcaag tccaaggcaa gagctggatc gcgcttgggg
     1621 atccgattgg tcctggcgat gagcatcaga aactgctatg ggcgttccgc gagctctgcg
     1681 atcgccgggg cgggtggccg gtcttttatc tgatcgatgc cgaaggtctg tcgcgctatg
     1741 tcgatctcgg actgtccttg ctcaagctgg gcgatgaagc acgggtaccg ctcgataggt
     1801 tttcagtcga atacggcggc actgccgtgg agttgcgcca tcttcatgat agtatagcgg
     1861 cacggggctt ctgctttgaa atggtcaatt ccatcaaggt accgtcgctg atccctgagc
     1921 ttaaaagggt atccgatgac tggctcgcca ccactcacac ccaagagcga ggtttctcca
     1981 tggggttttt tgatcccgat tatatagcca atttcccctg cgcactggtg cgcagtaacg
     2041 atcatcggct ggtagccttt gctatcctgt gggcgagtcc caataaagaa gaactggccc
     2101 tggatcttat gcggtatcat catgacgccc ccaagggggt gatggactat ctgctcattg
     2161 aattgatgcg tggggggcgg gcgcgcggct atcgctggtt taatctgggc attgcgcccc
     2221 tttcagatct cgaggcccat cccctggcgc ccctgtggca ccgcatcggt aggctcatgt
     2281 accgccagag cgaacacttc cgcgatctcg aaagcctgcg ccgttacgag gagaggctta
     2341 atcctgtatg gcgaccaaaa tacctcgcct cgccaggtgg gctcaacacc ctgcgtatat
     2401 tgcgtaacat cactaaactt attgcccggg agagaaagtg agatttaatt aacctaccgc
     2461 ggggaaggcc ttggcagtat cgctcttttt taggatggaa agggtaataa cgacgatgcc
     2521 cagcagaatc gtcaagatcc cgacgatctt gaccgggggg aacgcttcac caaagacaaa
     2581 atagccgctg aatagggtca ccggacgttg ggtcatcgtg atcaagggca cgctgactga
     2641 gacatcaccg tggaagtagg ccatttgcat gagtatgaag ccgatgatgc caaataccac
     2701 gagggcaaag aacggccaga ctgccaggga ttcaagcacg ctctccaaag agaagacaga
     2761 gaaatgcccg atctctgcaa ttgtcaagtt ggtcgttgcc tttaaaacgg atgttcccct
     2821 ctgacctcac actaacttat tgaagtaaaa agagaacttc
//
LOCUS       DASQSL010001764         1358 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_117732, whole genome shotgun sequence.
ACCESSION   DASQSL010001764 DASQSL010000000
VERSION     DASQSL010001764.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1358
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117732"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            281..1231
                     /locus_tag="VE844_17790"
     CDS             281..1231
                     /locus_tag="VE844_17790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018129606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZC03136.1"
                     /translation="MTASLLFAGIDVAKATLDIAVRPSAQTWQVIYDDVHVEALVTQL
                     NDLSPTLIVVEATGGLERLLVVALLTAGLPVVVINPRLARDFAKATGRLAKTDRIDAR
                     VLAHYGEAIRPSCRPLPDADTQQLRAMVDRRRQLVDMMTAEQSRLSCSPARLQDSIEC
                     HIDWLRQQIASLDDDLESMLQNSPLWREHDAILQSVPGVGPIVSHTLMVHVPELGHLN
                     RKQIAALVGVAPFNRDSGAYRGRRSIWGGRAAVRAVLYMGALVATRHNPAIREFYQRL
                     LAAGKTKKVALTACMRKLLTILNAMMKHQSRWQPRGAASV"
BASE COUNT          294 a          374 c          395 g          295 t
ORIGIN      
        1 agaggatata agccagtgaa aataattacc tagggcggtg agcttgcggc tgaccgtttt
       61 gcgactcaac cccttgtatc ttgaatttgt catctgagag ataatgccag gtctctcaga
      121 tgatgtattc cgggcgtgcc aggccgtgat ccccaaggtc ggtttcacca gaccgcaggg
      181 gagcttgggt cggcacgtcc ttgcctgaca aagcccgtac agttgtctgg gccaaccgag
      241 cccgaatcct gcaaggtagg gcatcctgac aggagttgtg atgacagcgt cgctgttgtt
      301 tgcaggcata gacgtggcca aagccactct ggatatcgcg gtgcggccga gtgctcagac
      361 ttggcaagtc atctatgatg acgttcatgt cgaggcactc gtgacgcagt tgaacgatct
      421 gtcaccgacc ctcatcgtgg tcgaagccac cggtggcctg gagcgcctct tagtggtggc
      481 cttgctaaca gcaggcctgc cagtcgtcgt gattaacccc cggctggcac gggatttcgc
      541 caaagccacg ggccgcttgg ctaaaaccga tcgcatcgat gctcgggtgc tggcgcatta
      601 tggcgaggcc attcggccgt cttgcaggcc gctgccggat gccgatacgc agcagttgcg
      661 cgccatggtg gaccggcgtc ggcaactcgt tgacatgatg acggctgagc aaagtcggct
      721 gagctgttca ccggcgcgcc ttcaggactc gattgagtgc catatcgact ggctgcgtca
      781 gcagattgca agcctcgatg acgacctcga gagcatgctc caaaacagcc ccctatggcg
      841 cgagcacgat gccatcttac aaagcgtgcc cggtgttgga ccgatcgtgt ctcacacctt
      901 gatggttcac gtgcccgagc tcggccacct caaccgcaaa cagattgcag cgttggtcgg
      961 cgtggcccca ttcaatcgtg atagtggcgc ataccgaggg cgccgaagca tttggggtgg
     1021 ccgcgccgcg gtacgggctg tcttgtatat gggagccctg gttgctacac gccataaccc
     1081 agcgattcgg gagttctacc agcggttgtt agcagctggc aaaaccaaaa aagtagccct
     1141 cactgcgtgt atgcgtaaat tactgaccat tctcaatgca atgatgaagc atcagagtcg
     1201 gtggcaaccg cggggagcag caagcgtgta aaaatacaca aagctcttga caaaaaagac
     1261 agttgctacc cggatatatg acaacgcctc atccagccct tttctttctg attttgcacc
     1321 acttatggta tcggtgaaga ttttgagaca gccggcgg
//
LOCUS       DASQSL010001765         1589 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_36796, whole genome shotgun sequence.
ACCESSION   DASQSL010001765 DASQSL010000000
VERSION     DASQSL010001765.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1589
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36796"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1589
                     /locus_tag="VE844_17795"
     CDS             <1..>1589
                     /locus_tag="VE844_17795"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HZC03137.1"
                     /translation="DTISRTNGRPSLNIVVLKEPDANTVDVTAQTLQAVEQIEGLPPD
                     IEVLVLQNDGPEVERELSGLLQEGLLGFLFAVSVVFIFLINTRPTLLRGLAITLRPTL
                     IIGISIPLSIMTGILIMGLANLSLNFMSLAGLAIAIGRVVDDSIVVLENMYRHMQRGQ
                     DKFHAALEGTSEVGAAIISSTLTTIVVFVPLAFIQGLVGEFFTPFALSVSFAMIASAI
                     VALTIIPVLGVLLLREGDFPEEEADRETILQKIYTPILIWTLRHKITTVLGAVGVTFA
                     SLLLLAVIPITFFPEGTPQFLSIDVEMPTGTSIGRTFPEVMKVEQVLEELHQAGQVEL
                     YQVTLGSASQEFGPGAGGGGFHLAGFFVKLAEDVPPDIADRIRSRVPGNDEVTITVTE
                     ITDGPPADPLEVTVTGSNFTSIAAVTRELEAEIAEIESIINVNSDVSDARDEVTIHAD
                     PRAAAEFGLSTAQVGQQVNQFIVGATVSEVDLNNLTMDVVVRGQPEDVDDIEKLEDLN
                     IQGPLGLVKLGSVSRIALEQGP"
BASE COUNT          317 a          446 c          467 g          359 t
ORIGIN      
        1 gacaccatct cccgcaccaa cggccggccc agcctgaata tcgtcgtcct taaagagccg
       61 gacgccaaca ctgttgatgt gacggcgcaa accctgcagg ctgtagagca aattgagggc
      121 ctgcctcctg acattgaggt cctggtgttg caaaacgatg gcccggaggt ggagcgggag
      181 ctttccggtc tgctccagga gggccttctg gggttcctct tcgccgtcag cgtcgtcttt
      241 atctttctga tcaatacccg tcccaccctg ctccgggggc tggcgataac tctccggccc
      301 actcttatta ttggaatctc cattcccttg agcatcatga ccggcattct gatcatgggc
      361 ctagccaacc tctccctcaa cttcatgagc ctggctggtc tggccatcgc cattggccgg
      421 gtggtagatg acagtatcgt ggtgctggag aacatgtatc gccacatgca gcgcgggcag
      481 gacaagttcc acgccgctct tgagggaacc agcgaggtgg gcgccgccat catctcctct
      541 accctaacta ctatcgtggt gttcgtcccg ctggctttca ttcaaggtct ggtcggtgaa
      601 ttcttcactc cctttgccct gtcggtaagc ttcgccatga tagcttctgc cattgtggct
      661 ttgacgatca ttcccgtgct gggcgttcta ctgctgcggg aaggcgactt ccctgaagaa
      721 gaggctgacc gggagaccat attacagaaa atttacaccc ctatcctcat ctggacttta
      781 cggcacaaga tcaccaccgt actgggagca gtgggcgtga ctttcgccag cctgctattg
      841 ctggcagtca ttcccataac cttcttcccg gagggcacac cgcagttcct cagcatagat
      901 gtggagatgc ctaccggcac gtctatcggg cggacttttc ctgaggtgat gaaggtagag
      961 caagtcctgg aggaactcca ccaggcgggc caggtggaat tgtaccaggt gaccctgggc
     1021 agcgcctctc aggaatttgg ccctggggcg ggcggcggcg gctttcacct ggcgggcttc
     1081 ttcgtcaaac tggctgaaga tgtgccgcca gatattgctg accgtatccg ctcccgcgtc
     1141 ccggggaacg atgaagtcac cattacggta accgagatta ccgacgggcc gcccgcggac
     1201 cctctggagg tcactgtcac cggcagtaac ttcacttcta tagctgcggt gactagagaa
     1261 ctggaagcgg agatagcgga aatagagagc atcattaacg tcaacagtga tgtgtccgat
     1321 gccagggatg aggtaacgat tcatgctgac cccagagcgg cggcggagtt tggtctgtcc
     1381 actgcccagg ttggacagca ggtcaaccag tttattgtgg gggctacggt tagcgaggtt
     1441 gatctgaaca atctgaccat ggatgtcgtg gtgcggggcc agccggaaga tgtggatgat
     1501 attgaaaagc tggaggacct gaatattcaa gggccgctgg gcctagtgaa gctggggtcc
     1561 gtcagccgga ttgccctgga gcaggggcc
//
LOCUS       DASQSL010001766         1101 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_80144, whole genome shotgun sequence.
ACCESSION   DASQSL010001766 DASQSL010000000
VERSION     DASQSL010001766.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80144"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            187..558
                     /locus_tag="VE844_17800"
     CDS             187..558
                     /locus_tag="VE844_17800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03138.1"
                     /translation="MLLLPEGLRALKRVAKTVGLDLRGAYLNLDAGFDSTHNRKCMFN
                     AGMIPNITENPRNRKRTKRGRKRFFNAAIHALRTRIDRTFAWEDKFKRLLLRFEHMQQ
                     RHFGMKLMAYTLINVREFCGA"
     gene            complement(646..1092)
                     /locus_tag="VE844_17805"
     CDS             complement(646..1092)
                     /locus_tag="VE844_17805"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HZC03139.1"
                     /translation="MALARWTPRGDLQSFQDEMNRMFDQFFRGGSSGEAGWGTYTWAP
                     PVDIYETDDALILTVDLPGVPKEAVSIEIHQNTLMLRGERKPAAEAPADRYHRTERAY
                     GAFQRSFVLPTLVNQEHVQATYHDGVLELRLPKSDAVKPRRIAIQS"
BASE COUNT          239 a          319 c          327 g          216 t
ORIGIN      
        1 ggacgagaag aagctcgatg tacgcatact ccatggtgac gggaccaaca ccgtggccaa
       61 aaagggggag acgggattgg ttactctggt tacaaacacc agaagggcga gaaggtcatc
      121 gccatcactg acaattatgg ctatgtgctg tccccactcc ccgtggctcc cgtcaatgag
      181 acggacatgc tactgctgcc ggaggggctc agagccttga agagggtggc caaaacggtc
      241 gggttggatc ttagaggcgc ctatctgaat ctcgacgccg gctttgattc cacgcacaac
      301 cgcaagtgca tgttcaatgc gggcatgatc cccaacatca ccgagaatcc ccggaaccgc
      361 aagcgtacca agcgagggcg caaacggttc ttcaatgccg ccatccatgc cctaaggacc
      421 cgcattgatc ggacctttgc gtgggaggat aaattcaagc ggctcctcct tcggtttgaa
      481 cacatgcagc aacgacattt tggcatgaag ttgatggcat acaccttgat caatgtgcgg
      541 gagttctgcg gtgcctaaaa ctcgcaacca gttcaaaaga aaagacaaag ccccagcaga
      601 gatgctactg gggcttgccg tgtgcacgag actgctgaag cgatcttagc tctggatcgc
      661 aatgcgccgc ggtttgaccg cgtcgctctt gggcaggcgc agctcgagca cgccgtcatg
      721 ataggtcgcc tgtacgtgct cctgattcac cagggtcggc agcacgaagg aacgctggaa
      781 cgcgccgtag gcgcgttcgg tgcgatgata ccggtcggct ggcgcctccg ccgcaggttt
      841 gcgctcgcct ctgagcatca gggtgttctg gtggatctca atgctcaccg cctctttggg
      901 gaccccgggc aggtcgaccg tgagaatgag ggcatcatcc gtctcgtaga tgtccacggg
      961 cggggcccag gtgtacgttc cccagccggc ctcaccgcta ctgccacccc ggaagaactg
     1021 atcgaacatg cggttcatct cgtcctggaa ggactggaga tcccccctcg gggtccatcg
     1081 ggccaatgcc atggtggctc a
//
LOCUS       DASQSL010001767         1241 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_52016, whole genome shotgun sequence.
ACCESSION   DASQSL010001767 DASQSL010000000
VERSION     DASQSL010001767.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1241
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52016"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..201
                     /locus_tag="VE844_17810"
     CDS             <1..201
                     /locus_tag="VE844_17810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HZC03140.1"
                     /translation="KAVGQYVMIPGLKQVIAHYAHDPAWVTVRPPLTELTAAQAQQVI
                     EALKQLGFNMPGLRGVAAESAV"
     gene            859..1044
                     /locus_tag="VE844_17815"
                     /pseudo
     CDS             859..1044
                     /locus_tag="VE844_17815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424993.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          286 a          356 c          323 g          276 t
ORIGIN      
        1 aaggccgtcg gccagtacgt gatgatcccc gggctcaagc aagtgatcgc gcactacgcc
       61 cacgaccccg cctgggtgac ggtgcgccca ccgctcaccg agctcaccgc ggcccaggcg
      121 cagcaggtga tcgaagcgct gaaacagctg ggcttcaaca tgccgggcct tcggggcgtg
      181 gcggcggagt cagccgtgta acccgcgctg gcgcgtgacc gaatctccca taacagtcgc
      241 gttgagcctt gtgctgcccg aagggacgac aaatcctcac gtgtcgcttt ataagcgttg
      301 cgaagccgac atgagctgct catcaccttc ttcgggcagg ctgtgcacgg tatcatcgaa
      361 tgccttatga gccaccacat gccgaggttc ccctataaga atcgagcccc gaggtttggc
      421 cattccaccg tggcgcaagc aagtggtctg acaccttccc ccatcgcggg ggaaggtggg
      481 gatggggggg cgcccatcct gggagaccca tgaaccctta tattggaacc tcagcctcgc
      541 ctctatagaa tgtttgacgt gaatcctatc ttagcctatg ctgcggaaaa ttattggtgt
      601 cggcacggaa gcttgcaata cctctcagac atctcttgcc atgactccta ttcttcccta
      661 caagccaaat gattccggtc agctttttag ctgccaaggt taagtcaata acgatcaaca
      721 ataattccag gtcagctctt tccacgttta agtccgatca tatatggatg attctttagc
      781 cctataatag ctgagctgat cgatgattca acgttcgaga acctccatta agacccagac
      841 cacttaaggc tgcatactat gcccagaatc tttgacaaca tcgatcggtc acttctccca
      901 gcacttcgcg aaacattggc gctctccaac cgagctgact tctgtgtcgg ctacttcaac
      961 ctgcgcggct ggaagcaaat cgatgaccac attgagcgct ggtcaggtgg aaccggccat
     1021 tgttgtcgcc tgctggtcgg catgctcgtt acctgaaaga ggtcgatgtc agcgagaaga
     1081 cactgcggtt ctggcaagaa atttacgacg accaggacct gttggttgaa gtccatgaaa
     1141 aagaccctgt cgacataagc cattgaagaa ttcgtgagga ttgggagatg gcgattaccc
     1201 gcgagacgat ggcccacaag ctggccgcat attcccatca t
//
LOCUS       DASQSL010001768         1128 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_162374, whole genome shotgun sequence.
ACCESSION   DASQSL010001768 DASQSL010000000
VERSION     DASQSL010001768.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162374"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..335
                     /locus_tag="VE844_17820"
     CDS             <1..335
                     /locus_tag="VE844_17820"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZC03141.1"
                     /translation="ELEEGIDSFLDPVRVSGILYITREAMSNAIRHAGASKVMIHLAR
                     IEEKLVLTIRDNGRGFNLAAVDAENSGPLKQQGLRNMAERAQLLGGQLLVVSSPGNGT
                     EVYVEVRV"
     gene            332..1018
                     /locus_tag="VE844_17825"
     CDS             332..1018
                     /locus_tag="VE844_17825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HZC03142.1"
                     /translation="MRAEGDLMSKPCIRLLLVDNHQIVRIGLATLFRTVPHFLVVGEA
                     GTVEEAVAQARQCAPDVVLMDVRLPDGSGIEACRQIRSERPEARVLMLTSYSDEEAVI
                     ASIMAGAAGYLLKDTNAERLIEGIEAIARGGSLLDPAVTQTVLSLMQQPSTQVPGDPL
                     SELSEREREILPLIAEGKTNREIALMLSLSENSVKSYVSNILQKLRLARRAEAAAFMA
                     RRGSQQQTET"
BASE COUNT          243 a          300 c          342 g          243 t
ORIGIN      
        1 tggaactgga ggaaggtatc gatagcttcc tcgatcccgt tcgggtcagc ggtatcctct
       61 atatcacccg tgaggcgatg tccaatgcga tccggcatgc tggtgcgagt aaagtaatga
      121 tccacctagc acgaatcgag gagaagctcg tgctcacgat tcgggacaat ggacgtgggt
      181 ttaacctcgc cgccgttgac gcagagaaca gcggcccctt aaagcaacaa ggtctgcgca
      241 atatggctga gcgggcacag ctgcttggcg gccaactgtt ggttgtgagc tccccgggaa
      301 atggtacgga agtttatgtg gaggtgagag tatgagagcg gaaggcgacc tgatgtccaa
      361 accgtgtata cggctgctcc tggtggacaa ccatcagata gttcgtattg gcctggcgac
      421 tctgtttcga actgttcccc acttcttggt ggtcggagaa gctggtaccg tagaggaagc
      481 cgttgcccaa gctcgtcaat gcgcaccgga tgtggtactg atggatgtgc ggctgcctga
      541 tgggagtggc attgaggcct gccgacaaat ccgctccgag cgaccagagg cccgggtgct
      601 catgttgact tcatactctg atgaagaggc ggtcattgcc tccattatgg ctggtgcagc
      661 cggctatctt ctgaaggaca ccaacgctga aaggttaatc gagggcatcg aggccatcgc
      721 ccgtggcggc tcgttgctgg atccagcggt cacccagacg gttcttagct tgatgcaaca
      781 gcccagtaca caggttcccg gcgatcctct ctcggagctg tccgaacggg agcgggaaat
      841 cctgccgcta atcgctgagg gcaagaccaa tcgggagatc gcgctgatgc tctcgctcag
      901 tgagaacagt gtcaaaagct acgtcagcaa catcctccag aagctccgct tggctcggcg
      961 tgccgaggct gcggccttca tggcgcgacg agggtcgcag cagcagactg aaacttagct
     1021 acggtctgga ctaacctccc gaatgggggt gtaccttacc tccgttcgga cctgcttttt
     1081 acccccgaat gaggggtcaa aaaccacctg attgtcgata gtcatatg
//
LOCUS       DASQSL010001769         1221 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_117760, whole genome shotgun sequence.
ACCESSION   DASQSL010001769 DASQSL010000000
VERSION     DASQSL010001769.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1221
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117760"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            158..400
                     /locus_tag="VE844_17830"
     CDS             158..400
                     /locus_tag="VE844_17830"
                     /inference="COORDINATES: protein motif:HMM:NF024776.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC03143.1"
                     /translation="MTKHALPQDWKEARRKRAFELQAQGWQQRAIARAFGVSDTAVSQ
                     WMAARRERGPEAWHAKQHPSGPVKLTSRQLERLPEL"
     gene            649..1170
                     /locus_tag="VE844_17835"
     CDS             649..1170
                     /locus_tag="VE844_17835"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03144.1"
                     /translation="MVFVDESGFYLLPGLVRTYAPCAQTPVLRSVYTRDHWSVMSGIT
                     MQGRLSTMVRREALDSLDSAVFLHHLQLHVSDKLLVIWDGSPIHKGYVKTFLAEGGAK
                     QIHLEQLPPYAPDLNPDEGVWHYLKNVEMRNLCCLNLTHLRTELGLAIRRLRRKPHLI
                     TACVAEARLSREI"
BASE COUNT          252 a          343 c          376 g          250 t
ORIGIN      
        1 cgcaggtagg cctcgaggcg gcgctgcggg ctatacttgg tgagaacggc ggacacatgg
       61 gttatgaggg gttaattcac cagcgcatac gcggcatcaa aggttactga ccgttgcatc
      121 aatagcttaa atttggcctg cgtgccacaa tgcaggcatg accaagcatg cgcttcctca
      181 agactggaaa gaagctcgcc gaaaacgggc gtttgaactg caagcacaag ggtggcagca
      241 gcgtgccatc gcacgcgcgt tcggggtatc cgacacggct gtgagccagt ggatggccgc
      301 tcggcgtgag cgcggccctg aagcctggca cgccaagcag catccgagtg gtcctgtcaa
      361 gctgacgagc agacaactgg agcggctccc ggagttgtga tcccctgggg cggaggccta
      421 tggcttccgc ggccatgtct ggacgtgtgc ccgtgtggca gcggtcatgt gggtcgagtt
      481 tggcatagcc tatcacaaag cacacgtctc tcggttgcta aaggccttga gctggacgcc
      541 gcagctgccc attgaacggg cagcccaacg caacgaagcc gccatcgagc cgtggcgggt
      601 ccaggtctgg cctgaactca aaaaaaggca cgtctggaag gccggaccat tgtctttgtc
      661 gatgaatcgg gcttttatct gctgccaggg ctcgtccgaa catacgcgcc ttgcgcgcag
      721 acaccggtcc tgcggtcggt gtatacccgc gatcactggt cggtcatgag cgggatcacc
      781 atgcagggcc gactctctac catggtgcgc cgtgaggcgc tggacagcct cgacagcgcg
      841 gtctttctcc accacttgca gctgcacgtg tcggataaat tgctggtgat ttgggacggc
      901 tcgcccattc ataaaggata cgtgaaaacg ttcttggccg agggtggtgc caagcagatt
      961 catttggaac aactgcctcc ctatgcccct gacctgaatc cagacgaagg cgtgtggcac
     1021 tacctgaaga atgtggagat gcgcaatcta tgttgcctga acctgacgca tctgcggact
     1081 gaactcgggc tcgccatcag gcgcttacgt cgcaagccgc acctgatcac tgcgtgtgtt
     1141 gctgaagccc gactatcccg agaaatttaa gttttggagg caacgctctg taagttcgca
     1201 ggtcgtcgcc tatagcggtt t
//
LOCUS       DASQSL010001770         1272 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_52023, whole genome shotgun sequence.
ACCESSION   DASQSL010001770 DASQSL010000000
VERSION     DASQSL010001770.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1272)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1272)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1272
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52023"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            60..>1272
                     /locus_tag="VE844_17840"
     CDS             60..>1272
                     /locus_tag="VE844_17840"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HZC03145.1"
                     /translation="MLEPRTSLPLRLRLLNAVGKHLGAARLPVARLDEETLVQAAVKE
                     TGLTDFGSSYYREGLLRLLESLEDDAALHFAGRVVNREVIVGSLINRLLLTEACKQTP
                     ETFRKPLKPPIIVLGLPRSGTTFLHRLLAMDPAHRAVPWWELARPVPDAHSDEQSDRR
                     RQVLQRRLHRRQRAMPDYDRKHYTRVDTPEECIWLLANTFLSPLFWAFAPVYGYLDWY
                     KNQDRLQAYYEYRLLLQVLQAADPTRRLALKSSTHTGAVETLLQTVPGALLIQTHRNP
                     AEAAISLASLFYSAHHRMTERLDVRRMTEAILSFHEHQIARNLTTRDTHPGALFDVYY
                     DRLVADPIGTVRDIYDHYDLAWSDEFAEQLNSYVQQNPRGKHGAHRYAPEDFGQTAEA
                     ISERFAAYIERF"
BASE COUNT          276 a          399 c          342 g          255 t
ORIGIN      
        1 atgattcctt ctgaggtttc ttggaacact agcaaaacct gatacaaggg agggttttcg
       61 tgctagaacc acgcacatct ttaccattgc ggcttcgcct cctaaacgcg gtgggtaagc
      121 atcttggggc tgcccgtctg cctgtcgcca ggttggatga ggagacattg gtacaggctg
      181 cggtgaaaga gactggcttg accgatttcg gaagttcgta ttaccgagag ggcttgttac
      241 ggttgctgga gtctttggag gacgacgccg cgctgcattt cgccggtcgg gtagtcaacc
      301 gggaagttat cgtcggcagc ctcattaacc ggctacttct gaccgaagcc tgcaaacaga
      361 cccctgagac tttccggaag ccgctgaagc ctccaatcat agtactcggc ctaccccgtt
      421 caggaactac cttcctgcac cggctgctgg ctatggatcc cgcccaccgt gccgttccgt
      481 ggtgggaact agcgcgtcct gtgcccgacg ctcactctga cgaacagtcg gatcgtcgcc
      541 gccaggtctt acagaggagg ctacacaggc gtcaaagggc gatgcctgac tacgaccgca
      601 aacactacac ccgggtagac acccccgaag agtgcatctg gctgctagca aataccttcc
      661 tcagccccct cttctgggcg ttcgcgccgg tatacggcta cctggactgg tacaaaaacc
      721 aggaccgtct gcaggcctac tacgaatacc gcctacttct ccaggtgttg caggctgcag
      781 atccgacgcg acgcctggcg ctcaaatctt ccacccacac tggcgccgtc gaaaccctgt
      841 tacaaacggt ccccggagcc ctcctgatcc agacgcaccg caacccggcg gaggccgcca
      901 taagccttgc tagcctcttc tattcagcgc accacaggat gaccgagcgc ctcgacgtgc
      961 gcaggatgac cgaagcgatt ctgagcttcc acgagcatca gatagcgcgc aacctgacaa
     1021 cccgagacac tcaccctggc gccttgttcg atgtgtacta cgatcggctc gttgccgatc
     1081 ccatcggcac cgtcagagac atctacgacc attacgacct tgcttggtcg gacgagttcg
     1141 cggagcaact gaactcctac gtgcagcaga acccgagagg caagcacgga gcacatcggt
     1201 atgctccaga ggacttcgga caaacggcag aagccatatc ggagcgcttc gccgcttaca
     1261 ttgagagatt cg
//
LOCUS       DASQSL010001771         2295 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_136675, whole genome shotgun sequence.
ACCESSION   DASQSL010001771 DASQSL010000000
VERSION     DASQSL010001771.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2295
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136675"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2295)
                     /locus_tag="VE844_17845"
     CDS             complement(<1..>2295)
                     /locus_tag="VE844_17845"
                     /inference="COORDINATES: protein motif:HMM:NF019880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03146.1"
                     /translation="ASHLTDEWQAWCLDRWGLTPETLRRFCAGFAPVEAKGLWAHLRA
                     QGLTSQELAKTGLFVRVDGQFLDFFQGRLVIPYWKTTPDDTHPGEATYFIGRKTEHTP
                     DVEWEQAKYRKLPVHNPDDDKKAFISPVVTNHHFFGEHILPDAHGKTLLVTEGIADAL
                     AALQAGIPCLSPGTVSFRETDWPRLSRLCRHAAKVVIVNDVETSNAGEKGALNTARHL
                     VLQGIDARIGVLPKPDDIDKVDIADFLKDHDRAVLVGLIESAPTLFDHYLVRLHTVSE
                     ADQTAIAKDVYPLIAAVSGVEREKAERALAKALGVGLKALRASIAAATSKPSEASEER
                     SPHGDEMPYVVNDGHIAVYEGINARLFPPKLVADFIATISHELTTEEGAKIFVVTGQT
                     ITGRAFTVQMPAREFADERALKAALTEASGASSPIYAGMAKHLAPAIQLMSPKDVCRQ
                     RQYNRTGWAGDSFLIPGRVGADVVVDLPRKLPYRIAPQASLTVGLKALQSVVTCMDQT
                     QTTIGVTVPFQAPLAKLMGWQDERYALFIKGRTGSLKTSFAQMLMVLYGPDFLRDSLL
                     IKFGQGATANAMMALATHAHDLPLLLDNYKPSTGGGARELINLVHNILEGGEKDRLSR
                     ASTLRETKPVSCWPIITGEDVPDTDPASLARMLILPFCWQAGEPNKTLADAQEQAEHL
                     CAVGHAWLTWLESDDGRIRAQEEATKFLDTRADWAKTLHAQHKHMVNILRVATNLATH
                     QLTWQVLCTHPSIGPVLHEFTGAH"
BASE COUNT          449 a          683 c          683 g          480 t
ORIGIN      
        1 gatgggcgcc cgtgaactca tgaaggacgg ggccaatact ggggtgggta cacaggactt
       61 gccaggtgag ctgatgggtg gcgaggttgg tcgccacgcg caagatattc accatatgct
      121 tgtgctgtgc atggagcgtc ttggcccaat cagcacgggt atcgaggaat ttagtggcct
      181 cctcctgtgc ccgaatccgg ccatcgtcgc tttcgagcca ggtgagccag gcatgcccga
      241 cggcacacag atgctcagcc tgctcttgag cgtctgcgag ggtcttattg ggctcacccg
      301 cctgccaaca gaagggcagg atgagcatcc gtgccaggct cgctgggtcg gtatccggca
      361 catcttcgcc cgtgatgatc ggccagcacg agacgggttt ggtctcacgt agcgtagagg
      421 cccgactcaa gcgatccttt tccccgccct ccaaaatgtt atgaacgagg ttaatcaact
      481 cacgcgcccc cccacccgtc gagggcttat agttatcaag tagcagtggc aagtcatggg
      541 catgggtggc caatgccatc atggcattgg cggtcgcgcc ttgcccgaac ttaatgagga
      601 gcgaatctcg caaaaaatcc ggcccataga gcaccatcaa catttgcgca aaggacgttt
      661 tgaggcttcc ggtccgaccc ttgatgaaca gtgcgtagcg ctcatcctgc catcccatga
      721 gtttggccag tggtgcctga aacgggacgg taacgccgat ggtggtttgc gtctggtcca
      781 tacaggtgac gacactctgc agggctttga gtcccactgt caggcttgcc tgaggggcga
      841 tgcggtaagg cagcttgcgc ggcaagtcca ccaccacatc ggcgcccacg cgccctggga
      901 tcaagaacga atcaccggcc cagcctgtgc ggttatactg tcgctgtcgg cacacgtcct
      961 tgggactcat cagttgaatc gccggggcca agtgtttggc catccccgca taaatggggg
     1021 acgacgcccc actcgcctcc gtcagagccg ctttcagtgc gcgctcatcg gcaaattccc
     1081 gggcgggcat ctgcacggta aaggcgcgac cggtgatggt ctgacctgtg accacaaaga
     1141 tttttgcccc ctcttccgtc gtcagctcgt gtgagatcgt ggcgatgaaa tccgccacca
     1201 atttgggcgg aaagaggcgc gcattgatgc cttcgtacac ggcgatgtgc ccgtcattca
     1261 cgacatacgg catctcatcg ccgtgtggag atctttcctc gctcgcctct gatggcttgc
     1321 tcgtggcggc ggcaatcgag gcgcggaggg ccttgagacc gacccccaag gctttggcga
     1381 gcgcccgttc agccttttcc cgctcaaccc cgctcacggc cgcgatgagg ggatagacgt
     1441 ccttggcgat cgcggtttgg tcggcttccg acacggtgtg aagacgaacg agatagtgat
     1501 caaagagggt gggcgcggac tcgatcagcc cgaccaggac cgcgcggtca tgatccttca
     1561 ggaagtcggc aatatcgacc ttgtcgatgt catcgggctt tgggagtaca ccgatacgcg
     1621 cgtcaatacc ttgcaagacc agatgtcttg ccgtgttgag cgcacctttc tccccggcgt
     1681 tactcgtctc gacatcattg acgatcacca ctttggccgc atggcgacac aggcgactga
     1741 gccgtggcca atccgtctca cgaaaactca cggtccccgg tgacaggcac gggatgccgg
     1801 cctgcagtgc cgccagcgcg tcggcgatcc cttccgtcac gagaagggtt tttccgtgtg
     1861 cgtcagggag gatatgctca ccaaagaagt gatgattcgt gacgaccggg ctgatgaacg
     1921 ctttcttgtc atcgtcggga ttgtggacag gaagcttccg atatttcgcc tgctcccact
     1981 cgacgtcagg cgtgtgttcg gttttccggc caataaaata ggtggcttca ccgggatgtg
     2041 tatcatccgg ggttgttttc caatagggga tcaccaggcg cccctggaag aagtcgagaa
     2101 attgcccatc cacccgcacg aagaggccag ttttcgccag ctcttgtgac gtcaaccctt
     2161 gtgcccgtaa atgggcccac aggcctttcg cctcgacggg ggcgaatccg gcacaaaatc
     2221 gccgcaaggt ctcgggcgtt aacccccacc gatccagaca ccaggcctgc cactcatcgg
     2281 tgagatggct ggcgt
//
LOCUS       DASQSL010001772         1482 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_27242, whole genome shotgun sequence.
ACCESSION   DASQSL010001772 DASQSL010000000
VERSION     DASQSL010001772.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1482
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27242"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            30..455
                     /locus_tag="VE844_17850"
     CDS             30..455
                     /locus_tag="VE844_17850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03147.1"
                     /translation="MSRELGAAASSKHVEEANLFNITGPIVIRYSRSSIAAMPQFSYK
                     DAELDLSFSGDDITRRDAPLGEIVTVTLEDVPDAFVRSFTLLVPKMRLSMGDNVSFDT
                     LGIETIDRSGAFVPPPGPTGTLQIYRSHQLQGSAEVVAF"
     gene            521..1189
                     /locus_tag="VE844_17855"
     CDS             521..1189
                     /locus_tag="VE844_17855"
                     /inference="COORDINATES: protein motif:HMM:NF012923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004867 - serine-type endopeptidase
                     inhibitor activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SSI family serine proteinase inhibitor"
                     /protein_id="HZC03148.1"
                     /translation="MSEEQTHTFQALPTPQSYRVIDFDSTRVITLRTQPPRHVLVVSG
                     EKPYFNMEVFLSPLRYIRQPEYWGIEVVGRLPEIGLPAVAPYVVHHELNGIIGTRGIE
                     VIGGNRSEKIDIASHTVEPQTSFRLSITSAASGEPIASVTLSCSPDGGSHPNPAAACE
                     QLSKVDGRIEGIPEAPGPCTLEFNPVIVAASGTWNGEPRHYKQEFSNRCVAVRTTGGV
                     IFDF"
     gene            complement(1199..>1482)
                     /locus_tag="VE844_17860"
     CDS             complement(1199..>1482)
                     /locus_tag="VE844_17860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010596523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03149.1"
                     /translation="ELDRFCDAMIAIRKEIDRLAEGEWPAEDNPLRCAPHTATCLTDK
                     WDHPYSRELAAYPMGRTADKVWPPVRRIDQAHGDRNLVCSCPPMEVLQS"
BASE COUNT          317 a          443 c          431 g          291 t
ORIGIN      
        1 gcccggcctt tcacgatagg aggactctca tgtcacgaga actgggagcg gcggccagct
       61 caaagcacgt cgaagaagcg aacctgttca acatcacggg acccatcgtg atccgctatt
      121 ccaggtccag catcgcagcg atgccccaat tctcctacaa ggacgcagaa ctcgacctca
      181 gttttagcgg cgacgatatc actaggcgag atgccccgtt gggcgagatc gtcacggtca
      241 cactggagga cgtacccgat gccttcgtcc gttcctttac gctcctggtg ccgaagatga
      301 ggctgagtat gggcgacaat gtttccttcg acaccctggg tatcgagacg attgatcgct
      361 cgggtgcatt cgttccaccc ccaggaccga ccgggacgct gcagatctac aggtcgcacc
      421 aactccaggg cagtgcggag gtcgtcgcat tttaacgaag catcccagga agactcagcg
      481 tcggcgagga aagcaagaga gaccgcgaac ggagatcgtc atgagtgagg aacagacaca
      541 cacttttcaa gcattgccaa ccccccagtc ataccgggta atcgattttg actctacgcg
      601 tgtcatcacc ttacgaaccc agcctccgcg acatgtgttg gttgtcagcg gtgagaaacc
      661 gtacttcaat atggaagtct tcctttcccc gctgaggtac atcaggcagc ctgagtactg
      721 gggtattgaa gtggttggcc gcctgcccga gatcggcctg ccagctgttg ccccctatgt
      781 cgtgcatcac gaacttaatg gcattatcgg cacccgagga attgaagtca tcggtggcaa
      841 ccggtctgag aaaatagata ttgctagcca cactgtggaa ccacagacct ctttcaggct
      901 ttccataaca tcagcggcca gtggcgagcc catcgccagc gtgacattgt catgctcgcc
      961 ggatggcggc tcccacccca acccggctgc agcctgtgag cagttaagca aggtagatgg
     1021 ccggatcgaa ggaattcccg aggccccggg gccatgcact ctggagttca acccggtgat
     1081 cgtggccgcg tcaggaacgt ggaacggtga accacgacac tataagcagg agttttccaa
     1141 caggtgcgtc gcggtccgga cgactggcgg agtgatattc gacttttaaa gtcgctgttc
     1201 aggactgcaa cacctccatc ggggggcagg agcagaccag gttgcgatcc ccgtgagcct
     1261 ggtcgatccg ccgcaccggc ggccacacct tgtcggccgt gcgacccatc gggtaggcgg
     1321 cgagttcccg gctgtagggg tgatcccact tgtccgtcag gcaagtcgcg gtgtgcggcg
     1381 cgcaacgcaa cgggttgtcc tcggcgggcc actccccctc ggcgagccgg tcgatctctt
     1441 tccggatcgc gatcatggcg tcgcagaagc gatccagctc ag
//
LOCUS       DASQSL010001773         1831 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_68493, whole genome shotgun sequence.
ACCESSION   DASQSL010001773 DASQSL010000000
VERSION     DASQSL010001773.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1831
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68493"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            675..>1831
                     /locus_tag="VE844_17865"
     CDS             675..>1831
                     /locus_tag="VE844_17865"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013031619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HZC03150.1"
                     /translation="MDIKTYMHAIGQRARQSSFAMTRAGTAIKDKALLTIAEILEQQT
                     QVLLKANAKDRAVGKDLDAALLDRLELNEARVRAMADGLRQMAALPDPIGEISGLHRR
                     PSGIQVGKMRVPLGVIGIIYESRPNVTVDAAGLCLKSGNAAILRGGSEAIHSNRAIAA
                     CIYEGLAAAGLPEDAVQVVETTDRAAVGELIQLKDYVDIIVPRGGKELIERISRDARI
                     HVIKHLDGVCHVYIDDRADLDKAVKVAFNAKCQRYGTCNTMETLLVAEAIATLALNRL
                     GPMYREAGVELRGCKATRAILPYAILALEQDWSTEYLAPILSIRVVKDLDEAIDHIRR
                     YGSQHTDAIVTEDLSRAWRFLAEVDSSSVMVNASTRFADGYEYGLGAEIGI"
BASE COUNT          420 a          491 c          498 g          422 t
ORIGIN      
        1 gcagcccata gcgcgctcga gtcggcggta gcgtgactcc cccaaggcct attttgttaa
       61 gtccaaaata aaagcgctcc tccggcattg ccggggagcg ccttacgaac caatcgcaca
      121 agcaaccctc tctttgacgg ctctcactac tcagcgcacc aaagtggact ataatgagaa
      181 ctcttgtgcc gtttatagat atttttattt gaacagtggg atttctatac gattattaga
      241 atcaccctgc ttgcttgggg gcgggttccc acatgtgact acgctcagtg ctaccacagt
      301 tatagctaac agacttacga tccgcttcat agctatgcct ccattattaa tgacgttttt
      361 attctaaaac acacacctaa tatgcgatgt gcttatcaga ttataaaaac aaattataga
      421 attgcaagac tgagaatgtc ttgcagcaat tctaaatttg gattttaccc tgtatcggct
      481 ggctcaattt ctagctgctc agccataaag gccatcaagt gggacccgtt ctaaggtata
      541 cttcgcgtgt tgctcccaat cacggggttg cgaggctgcg ttctctctat tcgtcgccgg
      601 atagggcttg acgggtgtgg ggaagatatt cgaagatagt tttatagtta aagaaactaa
      661 tccacctgga acaaatggac atcaaaacct atatgcacgc gattgggcag cgcgctcggc
      721 agtcttcttt tgctatgacg cgcgcaggca cagcgatcaa agataaagcc ctgctcacca
      781 ttgcggaaat cctcgagcaa caaacccaag tcctgctcaa agccaatgcc aaggataggg
      841 ctgtggggaa ggatttggat gcggccttgc tggatcggtt agagctcaat gaggcccgag
      901 tccgggctat ggcggatggc cttcgccaga tggccgcttt gccggatccg atcggcgaga
      961 tcagcgggct gcaccgccgt ccgtccggga tccaggtcgg caagatgcgg gttccattgg
     1021 gtgtcatcgg catcatctat gagtcgcgcc ccaatgttac ggtcgatgct gcaggcttat
     1081 gcttaaaatc gggcaacgcc gcgatcttac gcgggggctc cgaggccatc cactctaatc
     1141 gggctatagc ggcctgcatc tatgaaggat tagcagcagc gggcttgccc gaggacgccg
     1201 tacaggtggt agaaaccacc gatcgcgcgg ctgtcggtga gctcatccag ctgaaggact
     1261 acgtggatat cattgtcccg cgcggtggca aggaactcat cgagcgcatc agccgggatg
     1321 cccggatcca cgttatcaag catctggatg gggtctgtca cgtctatatc gacgatcgcg
     1381 ccgatctcga caaggcggtg aaagtagcct tcaatgccaa atgccaacgc tatgggacct
     1441 gcaataccat ggagaccctg ctggtggcag aggccattgc tacgctggcc ttaaaccggc
     1501 tgggtccgat gtaccgggag gccggcgtcg aactgcgcgg ctgcaaagct acacgcgcga
     1561 tcctccccta tgctatccta gctctagaac aagactggtc aacggaatac ctggccccta
     1621 tcctgtcgat ccgggtggtc aaggatctcg atgaggcgat tgaccacatc cgccgctacg
     1681 gttctcagca caccgacgcg attgtgaccg aagatctgag ccgcgcctgg cgttttttgg
     1741 ccgaggtcga ttcgagctcg gtgatggtga acgcctcgac ccgctttgcc gatggttacg
     1801 aatacgggct cggcgccgag attgggatca g
//
LOCUS       DASQSL010001774         1524 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_199828, whole genome shotgun sequence.
ACCESSION   DASQSL010001774 DASQSL010000000
VERSION     DASQSL010001774.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199828"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(521..>1524)
                     /locus_tag="VE844_17870"
     CDS             complement(521..>1524)
                     /locus_tag="VE844_17870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03151.1"
                     /translation="CGRTFAATTGTPFYRLRTATDVVTVVLTLLCHGCPLQAIVAAFG
                     FDGRTVAQWQARAGEHCQELHRHLVEQGQVELSQVQADELWVKLVGQRLWMAMALAVP
                     SRLWLGGVISPHRDRALITELVQKVRACARSLALLVCVDGLASYVTAFLRVFRDPVRT
                     GRRGRPRLVTEPSLLIGQLIKRYARRRVVKVVHRVVRGTATAIAKVLKATGGTVINTA
                     YIERLNATFRSALAPLARRGRALAHKEAVLTAGMYLVGCAYNFCWYHDSLRRAAPQSV
                     PRKWQERTPAMAAGLTDHRWTLRELLLLKVPLPAWVQPKRRGRPPKLKLQPTMAMAA"
BASE COUNT          350 a          451 c          423 g          300 t
ORIGIN      
        1 cgatagacac accggaaaca aaagacccaa gaaaacccgt acaatgtttc ggtaatgaag
       61 caactaaaaa ctcgactttt gcggtaaact taaatataga ttgggcaaca aggactatta
      121 ttggaatcag aacctgacaa gtgcatcttt gcaatgacat cggaaactaa ctgaaagccc
      181 tgtgacgaag acacagaaat gctattagag ttcgatccct cgcacagtga gacatcgcat
      241 gatctctggt aaagcagaga tctggtccca tttgatgccg tggaatcgag tgcaacgagc
      301 gtgctgatga tttgacacag agaacaaatg tcacctgagt atcctcaggg aaagctgtcg
      361 ttagcccgat gaatattgct tgtgcttcat tcatttcaat caatgcgtag cgcattacct
      421 acgcagtaga ggtgtagtgt gtctgatgct gttttgttac cgcaaaagtc gagaaatatc
      481 tctgtttcct tccccacggt agcaccccag ttaaccgtgg tcatgctgcc attgccattg
      541 ttggttgcag tttcagcttg ggtggacgtc ctcggcgctt gggttgcacc caagcgggta
      601 gggggacctt gagtagcaac aactcacgca gggtccaacg gtggtctgtc agtcctgcgg
      661 ccatggccgg ggtgcgttct tgccacttcc ggggcacgct ctggggtgct gcccgccgaa
      721 ggctgtcatg ataccagcag aagttgtagg cacaccccac caaatacatc ccggcggtca
      781 gcaccgcttc tttgtgagca agggcgcgtc ctcggcgcgc caagggtgcc agggcgctgc
      841 gaaaggtggc attgagccgc tcgatatagg cggtgttgat aacggttccg cccgtggctt
      901 tgagcacctt ggcaatggcc gtggcggtcc cgcgcaccac ccggtgcacg accttgacca
      961 cccgccgccg ggcatagcgc ttgatgagct ggccgataag caagctgggt tccgtgacaa
     1021 gccgcggccg cccgcgacgc cctgtacgca cagggtcacg gaacacccgc aaaaaggcgg
     1081 tgacgtagct cgccaagcca tccacgcaga ccaagagagc caggcttcgc gcacacgcac
     1141 gaaccttctg aaccagttca gtgatcaagg cccggtcgcg gtgaggactg atcaccccac
     1201 ctaaccacag gcgcgacggc accgctaggg ccatcgccat ccagaggcgt tggcccacca
     1261 gcttgaccca cagctcatcg gcctgcacct ggctaagctc cacttggccc tgttcgacca
     1321 gatgccggtg gagctcttgg cagtgctcgc ccgcccgtgc ctgccattga gccaccgtac
     1381 gtccatcgaa accgaacgcc gccacgatgg cttggagagg acatccatgg caaagcaagg
     1441 tcaacaccac agtcaccacg tctgtcgccg tccgcagcct gtagaagggc gtccccgtcg
     1501 tggccgcaaa ggtccgccca cagg
//
LOCUS       DASQSL010001775         1129 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_52053, whole genome shotgun sequence.
ACCESSION   DASQSL010001775 DASQSL010000000
VERSION     DASQSL010001775.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52053"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1054
                     /locus_tag="VE844_17875"
     CDS             <1..1054
                     /locus_tag="VE844_17875"
                     /inference="COORDINATES: protein motif:HMM:TIGR01844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TolC family outer membrane protein"
                     /protein_id="HZC03152.1"
                     /translation="FTSGDYTLSITQPVYHHDLTLQYRQANTRIQQANAEFGAARQDL
                     IVRVAERYFDVLAAMDTLEFAGAEKQALFQQLDQAKQRFEVGLVAITDVQEAQAGYDR
                     AVADQIQAENLLENAREALRELTNEYHQTLLKLGEEIPLIAPVPPDIDRWIAKSLEQN
                     LRLAAAFQATKVARQEIARQSAGHRPTLDLIASHSSSTTGGRFGQADIDSSAIGLQFN
                     LPIYQGGQVNSRTREAQHRHEEALARLEQERRAAHRQAHDAYLGVITGISRVKALRQA
                     VISNQTSSEATQAGFEVGTRTGVDVVNAQREVFRAKRDYAQSRYNYILDTLRLKRAAG
                     TLTPADLTQINTWLSR"
BASE COUNT          262 a          334 c          311 g          222 t
ORIGIN      
        1 gtttacaagt ggggattata ccctgagcat cacccaaccg gtttaccatc atgacctcac
       61 cctccaatac cggcaggcca atacgcggat ccaacaggcc aatgcggagt tcggcgctgc
      121 tcggcaagat ttgattgtcc gtgtggcgga acgctatttc gacgtattgg cagccatgga
      181 cactctcgag ttcgccggcg ctgaaaagca ggcgctgttc cagcaactcg atcaggcaaa
      241 acaacgcttc gaggtcgggt tagtggctat caccgatgtg caggaagccc aagcgggtta
      301 tgatcgtgcc gttgccgatc agatccaggc ggaaaacctg ctggagaatg caagagaggc
      361 cttaagggaa ttgaccaatg aatatcacca aacgctgctt aagctcggtg aggagatccc
      421 attgattgcg ccagtccccc ccgatatcga ccgatggata gccaaatcct tagagcagaa
      481 cctgcggctg gccgcggctt tccaggccac caaggtcgcc cgccaggaga tcgcgcggca
      541 aagtgcgggc catcgcccta ccctggatct tatagccagc catagctcct ccaccaccgg
      601 cgggcggttt gggcaagcgg atattgattc atccgccatc gggctgcaat tcaatctccc
      661 gatctatcag ggcggacagg tcaactcgcg cacccgcgag gcccagcatc gtcatgaaga
      721 ggccttagcg cgccttgaac aggaacggcg ggctgcacac cgccaggctc atgatgccta
      781 cctcggcgtg atcaccggga tcagtcgcgt caaggcgcta cgacaggctg tgatctcaaa
      841 tcagacctcc agcgaggcaa cgcaggcggg ctttgaggtt gggacgcgta ccggggtgga
      901 tgtggtcaat gcccaacggg aggtgtttcg agccaagcgc gattatgccc agtcccgcta
      961 caactatatc ctcgataccc tgcgccttaa acgtgcggca ggcacgctca cccccgccga
     1021 tcttacccag atcaatacct ggttgagccg ctgaatatac cctttgggta ctgctgatag
     1081 atttttataa attagagcga tcacatcaat gccagtccaa atgaagctc
//
LOCUS       DASQSL010001776         2579 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_52056, whole genome shotgun sequence.
ACCESSION   DASQSL010001776 DASQSL010000000
VERSION     DASQSL010001776.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2579
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52056"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(418..687)
                     /locus_tag="VE844_17880"
     CDS             complement(418..687)
                     /locus_tag="VE844_17880"
                     /inference="COORDINATES: protein motif:HMM:NF021560.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2283 domain-containing protein"
                     /protein_id="HZC03153.1"
                     /translation="MKERYLEVTFRKGKPLAAYVYLPRRGEMRSAKTVEAAPGILVDY
                     ASSGEPIGLEITAPAHVTVEQINAVLEPLGLSGMTPEELAPLCAA"
     gene            complement(691..945)
                     /locus_tag="VE844_17885"
     CDS             complement(691..945)
                     /locus_tag="VE844_17885"
                     /inference="COORDINATES: protein motif:HMM:NF025442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4258 domain-containing protein"
                     /protein_id="HZC03154.1"
                     /translation="MPWPDWWEWELELTPHIEKRMEDREFTEVDLRAMLEQAEGYHLD
                     VVEGRWVIETRHRRHRWHVIVEPDPVERLLVVVTAYPIGD"
     gene            complement(1220..>2579)
                     /locus_tag="VE844_17890"
     CDS             complement(1220..>2579)
                     /locus_tag="VE844_17890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="MbcA/ParS/Xre antitoxin family protein"
                     /protein_id="HZC03155.1"
                     /translation="QSVAQPVDDVWHTLRAVDDRLAHQLLKHAKRLYRYEGLYEAWED
                     FSGGQVGEFDPNSPHNQAFFPWYLYNWTPETEGIEADTSSAPTIAQSYLDRYQKRLSA
                     IDIRFLNLVIRQPYSFYEVITCRPGEGFQLRDILLEKDVDVMEHSGSQMAHKGDMLFA
                     RIIEFDHVGLMVGSGSTLIPPASKPSIIHLRSMMRSPKGRLSIDDLQACDREIRELYF
                     AIDEHLHMPPQLRNTEGDPLCMHALYFEVDSPQYTFDQLKGLASHVDEADLLCEAELD
                     ADGQVQEVEFPWLKSGNAELPELEHTVLGHIHIQGHQLIASVNSKNRADRLKAEIEGR
                     LKGYVRYKATEIQSLMSMLREAKNRPSRQAGEDIAHVNAQPEIQEQIDQMLDAHWENW
                     VHTKLPALGDQTPFEAVQDADGREMVMALLDDMERREQNPMLGIKQQKYIDRARQQLG
                     LC"
BASE COUNT          562 a          763 c          645 g          609 t
ORIGIN      
        1 tggcggcatt aaataacctg tgctccgcat ttattggctc tccgtgcagt acgcgatcag
       61 ctcgcatctg aagacatggc ggaactgtaa aacggtgctg gacttccgca caccgagcgc
      121 tgacaataga cgtggatgac accccacgac caacctcgcc acgacagacg agatttctcc
      181 agcgtggctt gagcctcggg cctttcgccc gcgaggcggc tctatccagc caaccgcttc
      241 atacatgccg cctttcctct gcttatggcc gtctgacgtc gcctgccaca cttcgtcgcc
      301 atccattctt gattcttgag gcaataagca acacacagcg tcccgcttgt ggatctcctt
      361 gggcgtttgt catctcttcc cgtagagtca cctacataga catcatgccg cctctggcta
      421 ggcggcgcaa agcggtgcta actcttcagg tgtcatcccc gaaagaccta acggctccag
      481 cacggcgttg atttgctcca cggtgacatg agccggggcg gtgatttcca gaccgatcgg
      541 ctccccgctg ctggcataat caaccaaaat acctggggcg gcctcgaccg tcttggcgct
      601 tctcatctcc ccacgtcgag gcaggtacac atacgccgct aagggttttc ccttccgaaa
      661 ggtgacctct aagtagcgct ctttcatccc ttagtcccct attggatagg ctgtgacgac
      721 caccaagaga cgctcgacag ggtcaggctc aacaatgaca tgccacctgt gtcgccgatg
      781 tcgtgtctcg atcacccatc ggccttcgac cacatcgaga tgatagccct cagcctgttc
      841 taacatcgcc cggagatcga cttccgtgaa ttcccgatct tccatgcgct tctcgatgtg
      901 tggtgtgagt tcgagttccc attcccacca gtctggccat ggcatcccat ttcaccttgc
      961 cctcaagatc aaccctgatt ggagaccatc gcatggggac aacccgatat cgataccctg
     1021 ttgtgcgagg cctatttcag catgttgacg tgagaaaaac gggtaagcgc tggcgtatgt
     1081 gatccatcta tacgaccgcc ataccggtct cctgccgtac ggcccctgcc cctgccgtca
     1141 acctgactgg gataccgcaa cagaacggac gcctggagca tacgacccat gaagccaacg
     1201 cccaactcac atcatcacgt cagcacagtc caagttgttg acgggcacga tcaatatatt
     1261 tctgctgctt gatgcccaac atggggtttt gctcgcggcg ctccatgtca tccagcagcg
     1321 ccatgaccat ttctctccca tcggcatcct gcacggcttc aaagggcgtc tgatccccga
     1381 gagccggcag cttggtatgc acccagtttt cccaatgggc atccagcatc tggtcaatct
     1441 gttcttgaat ttccggttgg gcgtttacat gggcaatgtc ttcccccgct tgtcggcttg
     1501 gcctgttctt ggcttcacgc agcatcgaca tgagagattg aatctccgtg gctttgtacc
     1561 tgacgtagcc tttgaggcga ccttcaattt ccgctttgag gcgatccgcg cggtttttgg
     1621 agttcaccga ggcgatcagt tgatgcccct gaatatggat atgccccaaa acggtatgct
     1681 caagctctgg cagttctgca ttgccactct tgagccacgg gaactcaact tcttgcacct
     1741 ggccgtcggc atcaagctcc gcctcacaca acaggtccgc ctcatccaca tgcgacgcca
     1801 gacctttgag ttgatcaaaa gtgtattgcg gagaatcgac ctcaaagtat aacgcatgca
     1861 tacagagtgg atcgccttcg gtattgcgaa gttggggagg catgtgcagg tgctcgtcga
     1921 tagcaaaata cagctcacgg atttccctgt cgcacgcctg caggtcatca atcgagagac
     1981 ggccctttgg ggaacgcatc atgcttcgaa gatgaatgat cgagggcttg gaagcaggcg
     2041 gaatcagggt tgagccgctc cccaccataa gacccacgtg atcaaactcg atgatgcgag
     2101 cgaataacat atcgcctttg tgggccatct gagaacccga atgttccatg acatccacat
     2161 ccttttccaa taggatgtct ctgagctgaa agccttcacc cggacgacac gtgatcactt
     2221 cataaaagct atagggttgc cggataacca agttgagaaa tcgaatgtca attgccgaca
     2281 gtcgtttttg atatcgatcc agatacgatt gggcgatcgt gggagcgctt gaggtgtctg
     2341 cctcgatgcc ctcggtctca ggtgtccaat tgtacaaata ccaggggaaa aacgcctggt
     2401 tatgaggcga gttgggatca aactcaccga cctgaccgcc tgagaagtcc tcccatgcct
     2461 catagagtcc ctcgtaccta tagagacgtt tggcatgctt gaggagttgg tgtgctaacc
     2521 gatcatcaac cgctctgagt gtgtgccaga cgtcatcgac aggttgagca accgattgg
//
LOCUS       DASQSL010001777         1204 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_199843, whole genome shotgun sequence.
ACCESSION   DASQSL010001777 DASQSL010000000
VERSION     DASQSL010001777.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1204
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199843"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            202..>1204
                     /locus_tag="VE844_17895"
     CDS             202..>1204
                     /locus_tag="VE844_17895"
                     /inference="COORDINATES: protein motif:HMM:NF013087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008171 - O-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HZC03156.1"
                     /translation="MEYEDGPPPSLKILEITYSNFVIARALYAFAKLGIADLLGDKTL
                     SSEELAATAGVNPRALYRLLRTLSTADVVSESQDHSFKLGSLGEALRSDVPGSMRAWA
                     IFSGEPFYLQAWEGIVHSVQTGQTAWEHVHKMPVFEYIGQHPEAGAIFDQAMTSLSAG
                     EAPAIVSAYDFSGIRKLADIGGGQGMLLRTILKSHRKMTGVLFDRPDAVEGIHVQLAD
                     DGIAERCEVVSGDFFRAVPAGADAYLLSSVIHDWDDERSLAILRNCRRAMTNDARLLL
                     VETVVPAPGEAHFAKLQDLEMMVIVGSQERTLDEYSRLLERAGFKLARVVPTSEPLSI
                     "
BASE COUNT          249 a          336 c          373 g          246 t
ORIGIN      
        1 cgatacgcaa tcagctgcgc acggaacagc gcccataagt ttccgggaat acttactctc
       61 ggcagctcgg tgaatagaag catcctacac ccgtcctaag gtgcaagccc ttgccaactc
      121 cttccttgtc ggtcatagtc aaagtgttac gaagctatag gtagaggcta agaccttcgt
      181 cccaatcttt gggaggtgca catggagtat gaagacggtc ctccgccgag tctgaagatc
      241 ctggagataa cttattccaa cttcgtgatc gcccgcgcgc tgtacgcgtt tgcgaagctg
      301 ggcatagcgg acctcctggg ggacaagaca ctcagcagcg aggaactggc agcgaccgcg
      361 ggtgtaaacc cgagagccct gtatcgcctt ctgcgcacat tgagcacggc ggacgtcgtc
      421 tcggagtcgc aggaccacag cttcaaactg ggttctctcg gtgaggcttt gcgaagcgac
      481 gtgcccggat cgatgcgggc ttgggcgatc ttcagcggtg agccgttcta ccttcaagcc
      541 tgggaaggga ttgttcacag cgtccagacc ggccagaccg cctgggagca tgtgcacaag
      601 atgcccgtat tcgagtacat cgggcagcac ccggaagcag gagcgatctt cgatcaggcg
      661 atgacgagtc tctcggcggg agaggcgccg gctatcgtca gcgcgtatga cttctcgggc
      721 attcgtaagt tggcggacat cggcggaggc cagggtatgc tgctgcggac gattctcaag
      781 tcccatcgaa aaatgaccgg agtgctgttc gatcgcccgg acgccgttga aggaatccac
      841 gtacagcttg ctgatgacgg gatcgcggag cggtgcgaag tcgtgtccgg cgatttcttt
      901 cgggccgtgc ctgccggcgc ggacgcgtat ctgctcagtt ccgtcattca cgactgggac
      961 gacgagcgca gcctggccat cctcaggaac tgccgccggg caatgacgaa cgacgccagg
     1021 ctcttgctcg tcgaaaccgt cgttccggca ccaggtgaag cgcacttcgc caagctgcaa
     1081 gacctggaga tgatggtgat tgttggatcg caggaacgga cgttagatga atactcccgt
     1141 cttcttgagc gagcaggctt taagctggct cgtgtggtgc cgacaagtga gccgctgagt
     1201 attc
//
LOCUS       DASQSL010001778         5294 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_80207, whole genome shotgun sequence.
ACCESSION   DASQSL010001778 DASQSL010000000
VERSION     DASQSL010001778.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 5294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5294
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80207"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..311)
                     /locus_tag="VE844_17900"
     CDS             complement(<1..311)
                     /locus_tag="VE844_17900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003239947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ClpX C4-type zinc finger protein"
                     /protein_id="HZC03157.1"
                     /translation="MSDGKYNKGGESDRLLYCSFCGKSQHEVRKLIAGPSVFICDECV
                     DLCNDIIREEIQDKSMGSSGRKLPTPRQIRHILDEYVIGQEKAKKILSVAVYNHYKRL
                     DS"
     gene            complement(374..1006)
                     /gene="clpP"
                     /locus_tag="VE844_17905"
     CDS             complement(374..1006)
                     /gene="clpP"
                     /locus_tag="VE844_17905"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017940840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HZC03158.1"
                     /translation="MVTGVYGLNLVPMVIEQSARGERAYDIYSRLLKERVVFLVGPVA
                     DEVANLIVAQFLFLESENPDKDIHLYINSPGGSVTAGLAIYDTMQFIKPDISTLCVGQ
                     AASMGALLLAGGAQGKRHCLPHSRVMIHQPLGGFQGQATDVDIHAREILKARDRLNHI
                     LSKHTGQPLNKVEMDTERDNFMGPEEAKQYGIIDQVLYRRESHIAHGSER"
     gene            complement(1032..2102)
                     /locus_tag="VE844_17910"
     CDS             complement(1032..2102)
                     /locus_tag="VE844_17910"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF017509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HZC03159.1"
                     /translation="MQVSIEATGALERCLTVKIPEARIAGEVASRLTTLSRNAKIQGF
                     RPGKAPMKLVQRLYGDRVRQEVIAEVIRSSFTEAIKENGLQLASQASIEPLDSGSDQG
                     FTYQATFEVYPQITLVPAQQLTIIKPVCEVTEQDIDKMIETVKINSVANAVLPELNEE
                     LFQRFGVKEGGSAAFRQEVRRHLEGKCAEGVKQTLKAHVMDALLEANPIDVPKGLVNS
                     EAHRLHEEARRQAIVQKVPPEQIEALQSPALFEQQAQRRVALGLIIATIIHSTGLKAD
                     AAKVRSVIGALAANCEDPAKMIKWYYEDHERLQEVEAIVLEEEAVEWVLAQVHVEPRL
                     TTLDALMGGHPQGTVRVKETLY"
     gene            complement(2205..2289)
                     /locus_tag="VE844_17915"
     tRNA            complement(2205..2289)
                     /locus_tag="VE844_17915"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2253..2255),aa:Leu,seq:tag)
     gene            2432..3862
                     /locus_tag="VE844_17920"
     CDS             2432..3862
                     /locus_tag="VE844_17920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011136244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HZC03160.1"
                     /translation="MAKNIAAIFKRLAPPVDFWSLRLVDAREQGLTVRQDVLQPIRNR
                     YSRGVFITVLDRGGIGYAATSDVSESGLGAALEHALRWAQRTANINLLRPEHLAQAKT
                     SGTYHTPAERAWEDAPLEAKIVWLEEASQRLKAADAIVDWSASLTYRTSEVILLTSHG
                     VLLEQSFDILIPVLRAVANRGSETQARSFGYDRACQGGLEQLTRLGFFEASERVADEA
                     VQLLYAENCPSGRMDLLLMPEQMMLQIHESIGHPLELDRILGDERNYAGTSFVTPAMF
                     GSYRYGSDLLNVTFDPTRYEQLASYGFDDEGTKAQRCYLIRAGILVQPLGSATSQQRA
                     GLPGVANARACDWNRPPIDRMANLNVEPGTSTLDHLIQSIEYGVLMDTNRSWSIDDSR
                     NKFQFGCEYGRLITGGELKGIVKNPNYRGISATFWRNLKGVGDMSTFQIMGTPTCGKG
                     EPNQLIPVGHASPACVFDKVDVFGGA"
     gene            3869..5185
                     /locus_tag="VE844_17925"
     CDS             3869..5185
                     /locus_tag="VE844_17925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002708733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase TldD-related protein"
                     /protein_id="HZC03161.1"
                     /translation="MRAFFYGLADALAGLLEPGEVFLAYLAAEDSDFVRFNRNKVRQA
                     GRVRQIELTLELIEGRRHTGASCTLSGGMERDLPMIQALLARLRAQRRLIPEDPYLLY
                     ATELRNTEEIQPGTLPEAATAVREIITAAKGLDLVGFWASGALYRGFANSLGQRNWYS
                     SAPFNLDWSCYRQGDKAVKSSYAGFEWSQEKLFQRMDAVRNQLELLGKPPKTIEPGCY
                     RVYLAPSALKEIFWLLAWDSFGLKSHKTRQTAFIKMIQEGRKLHPWVSLTENNRAGLG
                     PGFTEVGFIKPERVELIERGGYSGCLVNPRSSQEYGVAVNSSEESPASLDLAPGTLPL
                     NEVLKRLDTGMYINSLWYCNFSDRNDARITGMTRYACFWAEQGQLMAPIEVMRFDESL
                     YNLLGERLLGLTAEREFIFDPDTYSRRSVSSLHLPGALVEDFRFTL"
BASE COUNT         1148 a         1456 c         1396 g         1294 t
ORIGIN      
        1 gaatccagtc gtttgtaatg attgtaaacc gccaccgaga gtatcttttt agccttttcc
       61 tggccaatta catattcgtc caagatgtgc cggatctgac ggggggtagg cagctttcta
      121 ccgctgctgc ccatcgattt atcctggatc tcctcgcgaa tgatatcatt gcagaggtcg
      181 acgcattcat cacaaatgaa cacggaaggg cctgcaatca acttgcgaac ttcgtgctga
      241 ctcttgccac agaaagaaca gtacagcagc cgatcacttt caccaccctt gttatattta
      301 ccgtcgctca ttgcctacct cgaggcgcag gaaaggttaa tagtacccaa gtctggcctt
      361 gacagactcg gaatcaacgc tcagatccat gagcaatatg ggattcccgc ctatagagca
      421 cctggtcgat gataccgtat tgttttgcct cctccggtcc catgaagtta tcgcgttctg
      481 tatccatttc cactttgttc agcggctggc ctgtatgttt agataggata tgattcaatc
      541 tatcccgcgc cttgagtatc tcccgtgcat gtatatccac atcggtagcc tgcccctgga
      601 atccaccgag cggttgatgg atcatgactc tcgagtgcgg caaacagtgc cgtttgccct
      661 gcgctcctcc ggccaataat agcgccccca tactggctgc ttgccctacg cacagggtgc
      721 tgatatcggg ttttataaat tgcatcgtat catagatagc caggcccgct gtgactgaac
      781 cacctggcga gttgatgtat agatgtatat ctttatcggg gttctcagac tccaaaaaca
      841 agaattgcgc cacgattaga ttggctactt catcggccac tggcccgacc aagaagacta
      901 cccgctcttt gagaagccgg gagtaaatat cataagccct ttcgccacgc gctgattgct
      961 cgataaccat cggcaccagg tttaagccat atacgcctgt taccacgttg ctgttctccc
     1021 tatcgctcat cttaatagag ggtttccttc actcttaccg tgccctgggg gtgtcccccc
     1081 atcaatgcgt ccaatgtcgt taggcgtggc tcgacgtgta cttgggccag cacccactcc
     1141 actgcttctt cctcgaggac aatcgcctcc acttcctgaa gacgttcatg atcttcatag
     1201 taccatttaa tcatcttagc tggatcttca caatttgctg ccagcgcccc gatcactgag
     1261 cggactttcg ccgcatctgc ttttaatccg gttgagtgga taatggtggc gataatgagt
     1321 cccagcgcca cccggcgttg cgcctgctgt tcgaataggg caggagattg aagcgcctct
     1381 atctgctctg gcggaacctt ctgcacgatc gcctgcctac gtgcctcctc atgcaagcga
     1441 tgggcttctg aattcaccag ccctttaggt acatcgatcg ggtttgcctc caagagtgca
     1501 tccatgacat gtgccttcaa cgtttgttta acgccttcgg cgcacttgcc ttctagatgc
     1561 ctacggacct cttgcctgaa ggcggccgat cccccttcct taacgccaaa ccgctggaat
     1621 aactcttcat ttagctcagg cagtacggca tttgcaacac tattgatctt gaccgtttcg
     1681 atcatcttat cgatgtcctg ctcggttacc tcgcataccg gtttaatgat cgttagctgc
     1741 tgagctggaa ccaaggtgat ctgtggatag acctcaaagg tggcttggta agtgaaacct
     1801 tgatcagatc cagaatcaag gggctcaatc gatgcctggc tggccaattg caggccattc
     1861 tctttgattg cctcggtaaa actggaccgg atcacctctg ctataacctc ttggcgtacc
     1921 cgatccccgt ataagcgttg tacaagcttc attggggctt tccctgggcg gaatccttgg
     1981 atcttcgcat tccgcgataa ggtggtgagg cgactcgcca cctctcccgc tatccgcgct
     2041 tcagggatct ttaccgttag acaccgttcc aatgccccgg tagcctctat agaaacctgc
     2101 atatcctgca ttaccttgta ccttgaggtt aatctagaag acactctaag caagcttcag
     2161 accaaataga tatccctctc ttaacattat ctccacctct gcgttggtgc gaaaggagag
     2221 actcgaactc tcacgggtta ccccactgga acctaaatcc agcgcgtcta ccaattccgc
     2281 cactttcgcc tggaggacat cgggttgagc tctcgtcagg ataagcattt ttgctcatga
     2341 cgagctataa cacgcacatt atattcaatc agagatagta cttaaaaccc ttgtcttgtt
     2401 ttcccggcga tttcggagga tgctacctag catggctaag aacattgctg cgatctttaa
     2461 acgcctagcg cccccggttg atttttggtc gctgcgtctg gtcgatgccc gtgaacaagg
     2521 tctcacggtc cggcaagatg tattgcagcc gattagaaac agatacagcc gcggcgtatt
     2581 catcacggta ttggaccgag gcgggatagg gtatgcggct acgagcgatg tgagcgagag
     2641 cgggctcgga gcggcgctcg aacacgctct tcgatgggcg cagcgcacgg cgaatatcaa
     2701 tcttttgaga ccggaacatc tggcgcaggc aaagacctcg ggtacctatc atacccctgc
     2761 tgagcgagcg tgggaagatg cgccccttga agccaagatc gtctggttag aggaggccag
     2821 ccaacggctg aaggccgccg atgcgatcgt cgattggtct gcgtcactta cctaccgcac
     2881 cagtgaggtg atcctcctca ccagtcatgg cgtcctcctg gaacaatctt ttgacatcct
     2941 catccccgtg ctccgggccg tcgccaatcg gggcagcgag acgcaagcgc gcagctttgg
     3001 ctatgatcgg gcctgccagg ggggattgga gcaacttacc cggctaggat tctttgaagc
     3061 ctccgaacgg gtcgccgacg aagcggtaca attgctctat gcagagaatt gtccttcggg
     3121 ccgtatggat cttttgctta tgccagaaca gatgatgctg cagatccatg agagcatcgg
     3181 ccatccgtta gaacttgacc ggatcttggg cgatgagcgc aattatgccg gtactagctt
     3241 tgtcaccccg gcgatgttcg ggagctaccg ttatggctca gatctcttga atgtcacctt
     3301 tgatcctacc cgctatgagc agctcgcaag ctatggtttc gacgacgaag gcactaaagc
     3361 ccaacgctgt tacctgatta gagcagggat cctggtgcaa cctttaggca gcgctacttc
     3421 ccagcagcgc gccggtttgc ctggggtcgc caatgcccgt gcctgtgact ggaaccgtcc
     3481 gcctattgac cgcatggcca atctcaatgt ggagcctggt accagcacgc tggatcacct
     3541 tatccaatcc atcgaatatg gcgttctaat ggataccaat cgctcgtggt ccatcgacga
     3601 tagccgtaac aagttccagt ttggttgtga atacgggcgt ttgattaccg ggggcgaatt
     3661 gaaggggatc gtcaagaatc ccaactaccg tgggatctcc gcgaccttct ggcgaaacct
     3721 taaaggtgtg ggtgatatga gcacgtttca gatcatgggc accccgacct gcggcaaggg
     3781 cgagcccaat cagttgatcc ccgtggggca cgcctcaccc gcctgtgtgt tcgataaggt
     3841 ggacgtgttc ggaggcgcct gaagagcgat gcgtgcgttt ttctacggtc tcgccgacgc
     3901 cctggcggga ctgcttgagc caggtgaagt atttctggct tatcttgcag ccgaggactc
     3961 cgatttcgtc aggtttaatc ggaacaaggt acgtcaggcg ggtcgggtgc gccagatcga
     4021 actcaccctc gagctcatcg aaggccggcg ccatacgggc gcaagctgta cgctgagcgg
     4081 tggaatggag cgggatctac cgatgatcca ggcgctgttg gcaaggctcc gggcgcaacg
     4141 ccggctgatc ccggaggacc cttacctcct ttacgctact gagcttagaa ataccgagga
     4201 gatccaacca ggcaccttgc ccgaggcggc tacggcggtg cgggagatca tcacagcggc
     4261 gaaagggttg gatctggtcg gtttttgggc gagcggcgcc ctctatcgcg gattcgccaa
     4321 ctcgcttggg cagcgcaatt ggtatagctc cgctcctttc aatctcgact ggagttgcta
     4381 tcggcagggg gataaggcgg taaaatccag ctatgccggt tttgagtgga gtcaagagaa
     4441 gctttttcag agaatggatg cggtacgtaa ccaactcgaa ctcctgggga aacccccaaa
     4501 gacgattgaa ccgggctgtt accgggtcta tctggcgcct tccgcgctga aagagatctt
     4561 ttggttattg gcgtgggata gctttggcct caaaagccat aagacccgcc agaccgcgtt
     4621 tatcaaaatg atccaggaag gccgcaagct ccatccgtgg gtgagtctca ccgaaaacaa
     4681 tcgagcgggg ctcgggcctg gatttaccga ggtgggtttt atcaaacccg aacgggtcga
     4741 gttgatagaa agaggtggct acagcggctg cctggtcaat ccccgcagca gtcaggaata
     4801 cggtgtggcg gtgaatagca gcgaggaatc tcctgcatcg ctcgatctag ctcccgggac
     4861 tctgccctta aacgaagtgc tcaaacggct cgataccggt atgtatatca atagtctctg
     4921 gtactgcaat ttctctgatc gcaatgatgc tcggatcacc ggcatgaccc gttacgcctg
     4981 cttctgggct gaacaggggc agcttatggc gccaattgag gtcatgcgct tcgatgaaag
     5041 cctgtataac ctgctaggcg agcgtcttct tggactgacc gccgagcggg aattcatctt
     5101 tgatccggat acctattccc ggcgctcggt ctcgagccta catttaccgg gagctttggt
     5161 agaggatttc agatttacgc tttgacaaga gagaaccgtt tcgtcctcga agtctgagct
     5221 ggcccgacgt tcgaagtgaa gccactgtag cgagggtgaa tctgtcattg ggatgacgtc
     5281 gaacgcgaaa gctc
//
LOCUS       DASQSL010001779         1141 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_107046, whole genome shotgun sequence.
ACCESSION   DASQSL010001779 DASQSL010000000
VERSION     DASQSL010001779.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107046"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1141)
                     /locus_tag="VE844_17930"
     CDS             complement(<1..>1141)
                     /locus_tag="VE844_17930"
                     /EC_number="1.2.7.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013031132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran dehydrogenase subunit A"
                     /protein_id="HZC03162.1"
                     /translation="RIDKTYEVSDRVVMAGAIDPHTHIGGGKVTIARTLLPEDHRSDP
                     VAHTRLTRAGCGHAASSTLITGYRYAEMGYTACFEPAMLPINARQAHMEMADTPMVDK
                     GAYVMLGNDDFFLRLLAERKDQALINDYVAWTLHAAQALAVKVVNPGGINAFKFNQRK
                     LDLDEQNVHYGVTPRQILAALARAVYELGVPHPLHVHGCNLGVPGNVETTLTTIEGIA
                     GLPLHLTHIQFHSYGTEGDHKFSSGAARIAEAVNAHKNISIDVGQILFGQTVTASGDS
                     MRQYAGHAHAHPKKWVVMDIECDAGCGVVPFRYRDKSFVHSLQWAIGLEIFLLVDDPW
                     RVFLTTDHPNGAPFMSYPHLIRLLMDRSFRNERLAMIHKGAAASST"
BASE COUNT          235 a          324 c          350 g          232 t
ORIGIN      
        1 aggtgctact cgccgccgcg cctttatgga tcatcgccag tcgttcgttg cggaagctac
       61 ggtccatgag cagccggatc agatgcggat agctcataaa cggtgcgcca ttggggtgat
      121 cggtggtgag aaacacccgc caggggtcgt ccaccaatag aaagatctca aggccgatgg
      181 cccattgcag ggaatgcaca aagctcttgt cgcgatagcg aaacggaacc acgccgcagc
      241 ccgcatcgca ttcgatatcc atcaccaccc attttttggg gtgggcatga gcgtgcccgg
      301 catattggcg catggaatca cccgaggcgg tcaccgtctg accgaatagg atctggccga
      361 catcgatgga gatgtttttg tgggcattga cggcttcggc gatcctagct gcgcccgagg
      421 agaatttatg gtcgccctcg gtgccataac tatgaaactg gatatgggtc agatgcaggg
      481 gtagccccgc gatcccctcg atggtcgtga gcgtggtctc cacattgccc ggcacaccca
      541 ggttacagcc atggacatgg agcggatggg gcacccccag ttcatacacg gcacgcgcca
      601 gggccgccaa gatttggcgc ggtgtgaccc catagtggac attttgctcg tcgagatcga
      661 gcttgcgttg attgaatttg aaagcattga tcccgccggg attgaccacc ttgacggcta
      721 gtgcctgggc agcatgcagg gtccaggcaa cgtagtcatt gatgagcgct tgatccttgc
      781 gctcggccaa aagccgcagg aaaaagtcgt cgttgccaag catcacgtag gcgcccttat
      841 caaccatggg cgtatcggcc atctccatat gggcctgccg ggcattgata ggcagcatgg
      901 ccggttcaaa acacgccgtg tagcccatct ccgcataacg gtagccggtg atgagtgtag
      961 aggaagccgc atggccgcag cccgcgcgtg tcaatcgcgt atgggcgacc ggatccgagc
     1021 gatggtcttc cgggagcagg gtgcgggcga tcgtgacctt gcccccgccg atatgggtgt
     1081 ggggatcgat cgcgcctgcc atcaccaccc gatcactcac ctcataggtt ttgtcgatgc
     1141 g
//
LOCUS       DASQSL010001780         1827 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_52085, whole genome shotgun sequence.
ACCESSION   DASQSL010001780 DASQSL010000000
VERSION     DASQSL010001780.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52085"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(223..>1827)
                     /locus_tag="VE844_17935"
     CDS             complement(223..>1827)
                     /locus_tag="VE844_17935"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZC03163.1"
                     /translation="ETSQPTATPQAAAPPAEVEVHPGPLTWMVAGWGAERFDSVLAGT
                     GGINQFVRLMHGFLIAANEKGEMIPGIATDWSISEDGLTWTVTVRDGVKFHDGTDLTA
                     EDVAWTWNHEFSPESIPYSKSTTGLAQAEVTEKIEQTGPNQVSVTMTQIDSSFPVGML
                     AEAGPNAIGHILPKRDTLHNEAEEVAYDQNPIGAGPLKLTRHVQAEVMEFERFDDFYY
                     QPENGLPEDRRVKVKSWALRLVPEEATRVAAIRAGEADIAPASLATKEQVEAGGGRLI
                     FGPEGVYVRVRLDGCWVDPNFPCHDKRVRQALDYAINKEVLRDQLYGGPEVFQAKGWA
                     HVTPNALGYSPELDPWPFDPDKARQLLAEAGYPGGQGFGKLIVNTWVSTSMPFLPESA
                     QIAADSWRRELGIDVEVRVGDETSINEARRAGNLAGQITWRDNEARLDGASIIRSGYG
                     TPDLEDRFHNDPELFNMVKDTLAVTDETERPQAFNQLYRRLRDETHQLGIGYVNIPWA
                     VGPRVQEWRPFAFSFYPSGMHTITLK"
BASE COUNT          338 a          547 c          535 g          407 t
ORIGIN      
        1 acgctggacg ttggggcgcc agccttttca cactgatcat aaaaaatcgt gtagttccag
       61 ccaatgtctc ggtatgtatg tgcatgctgt ttataccttc tttcagtttt caatgaacga
      121 accttgttta tgctcccttt aacctccatc ggctgttgga aatgtcgagt ataaataagc
      181 cccaagtcaa ttcggttcgg ggctttggag acattgctcc gattacttta gagttatggt
      241 atgcatgccc gagggataga acgagaaggc gaagggccgc cattcctgaa cccgaggccc
      301 cacggcccag gggatgttca cgtacccgat gcccagttgg tgggtttcgt cccgcaaccg
      361 gcggtacagc tggttaaagg cttggggcct ctccgtctcg tcggtcaccg ccagggtgtc
      421 ctttaccatg ttgaagagtt ccgggtcatt gtgaaaccgg tcctctagat cgggagttcc
      481 gtagccggag cggatgatgc tggcgccgtc cagccgggcc tcgttgtccc gccaggttat
      541 ctggccggcc agattcccag cccgacgggc ttcgttgatg gaggtctcat cccccaccct
      601 tacctctacg tctatcccta attctcgccg ccaggaatcg gccgctatct gcgcactttc
      661 gggcaggaaa ggcatggaag tggaaaccca ggtgttgacg atcagcttcc cgaatccttg
      721 accaccagga tatccggcct ctgccagcag ctgccgggct ttatcgggat cgaagggcca
      781 ggggtccagc tctgggctgt agccgagggc gttgggggta acgtgggccc agcccttggc
      841 ctggaagacc tcgggtccac catagagctg gtcccgaaga acctccttgt tgatagcgta
      901 gtccagggcc tggcggaccc gcttgtcatg gcaggggaaa ttgggatcta cccagcaacc
      961 atcgagcctc acccgcacgt agacgccctc agggccgaag atcaggcgcc cgcctccagc
     1021 ttccacctgc tccttcgtcg ccaggctggc tggggcgatg tcggcttccc cagcgcgtat
     1081 ggccgccact cgggtggcct cctcaggcac cagccgcagg gcccacgact tgaccttgac
     1141 ccgccggtcc tcaggtaggc cgttctcggg ttggtaatag aagtcatcaa agcgttcgaa
     1201 ctccattact tcggcttgga catgccgggt cagcttcaaa gggccagcgc cgatggggtt
     1261 ttggtcgtag gctacttcct ccgcctcgtt gtggagggtg tcccgcttag gcaggatgtg
     1321 gccgatggcg ttggggccag cttccgccag catccccact gggaagctgg agtcgatctg
     1381 cgtcatggtg acgctcacct ggttgggccc ggtctgctcg atcttctcag taacctcagc
     1441 ctgggctaag ccggtggtgg acttggagta aggtatgctc tcgggactga actcgtggtt
     1501 ccaggtccag gccacatctt ccgccgtcaa gtctgtgcca tcatgaaact tgactccgtc
     1561 ccgaacagta acggtccatg ttaggccatc ctcagaaatg ctccaatcag tggcgatgcc
     1621 tgggatcatc tctccctttt cattggcagc aatgagaaat ccatgcataa ggcggacgaa
     1681 ctggttgata ccgccggtac cagcgagcac cgagtcaaac cgctccgcgc cccagccggc
     1741 aaccatccac gtcaatgggc ccggatgcac ctcaacctct gccggcggcg cggcggcttg
     1801 aggggtagca gtaggttggg aagtttc
//
LOCUS       DASQSL010001781         1204 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_36871, whole genome shotgun sequence.
ACCESSION   DASQSL010001781 DASQSL010000000
VERSION     DASQSL010001781.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1204
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36871"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(17..369)
                     /locus_tag="VE844_17940"
                     /pseudo
     CDS             complement(17..369)
                     /locus_tag="VE844_17940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015171872.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
     gene            complement(541..1149)
                     /gene="gstA"
                     /locus_tag="VE844_17945"
     CDS             complement(541..1149)
                     /gene="gstA"
                     /locus_tag="VE844_17945"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017365939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione transferase GstA"
                     /protein_id="HZC03164.1"
                     /translation="MKLYFAAGACSMAPHIVLREAAYTFDLERVDLAKKQTASGEDYT
                     RINPKGYVPALRLDNGEVLTEVAVILQYLADQKPESGSAPKTGTMERYRLMEWLNFVS
                     SEIHKQFGPLFNPKITVEWRENQLDLLGWRFDYLIERLNGKPYLTGGQLTVADAYLFT
                     VLNWSPLLKVDLGKWPRLKDYITRVAARPAVKEAMSAEGLRK"
BASE COUNT          222 a          378 c          319 g          285 t
ORIGIN      
        1 tctcgccacc ccttgctcag tccggtaggc ccgcgatctc gatcaccggc cggatctcga
       61 cggccccctt gcgcgccatt gggatccgtg cggcgatgcc gatcgcctcg tcgagatccc
      121 tggcgtcgat caggaagtag ccgcccagtt gttcgcgcgt ctccgcgaac ggaccgtcgg
      181 tcacgaacta tttgcctccg cgcacccgga cgctgatcgc cattgaggtt gggtgcaagg
      241 ggttggcggc cagatactgc ccgctcgact tgagctgttg tgcaagctgc gtggacttcc
      301 cgtaacactc ttcccgttcg gtctcgctca acgcagttcg tcgacgtaaa tcagcaacat
      361 gtatttcatg tgcgcctcca ttagctagtc gaatggtggg tgcccggctc gacatccccg
      421 ctgaaagttt cctatcatgg ggcacgctcc cgggcgcctt gagcgtccgt gcgttctccg
      481 cgatcggccg cattggattt ctttacccga actcacgagg gatttaccct gaaaatacca
      541 ctacttgcgc agcccttctg cactcattgc ctccttcacc gctgggcggg ccgccacgcg
      601 ggtgatgtag tccttaagtc ttggccactt tccaagatcg accttaagca aagggctcca
      661 gttaagcacg gtaaaaaggt aggcgtcggc cacggttaac tggccgcccg tcaggtaagg
      721 ctttccgttg agccgctcaa tcagatagtc gaaccgccaa ccgagcagat ccaactgatt
      781 ttctcgccat tccaccgtga tcttggggtt gaagagtggg ccgaactgct tgtggatctc
      841 cgaggacacg aagttcaacc attccatcaa gcggtagcgc tccatcgtgc ccgttttggg
      901 tgctgaccca gactctggct tctgatctgc gaggtactgg agtatgaccg ccacctccgt
      961 caggacctcc ccattgtcga gtctcagggc aggcacatag cccttggggt tgattctcgt
     1021 gtagtcctcg ccgctcgcgg tctgcttctt ggccagatcc accctttcca gatcgaaagt
     1081 gtaagctgct tcacgcaaca caatatgcgg ggccattgag caggcgcccg ccgcaaaata
     1141 gagtttcata cgcgtatcct ctctttaact gaataacctt gcattaacct cccagtggtt
     1201 cttt
//
LOCUS       DASQSL010001782         1193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_149495, whole genome shotgun sequence.
ACCESSION   DASQSL010001782 DASQSL010000000
VERSION     DASQSL010001782.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149495"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..267)
                     /locus_tag="VE844_17950"
     CDS             complement(<1..267)
                     /locus_tag="VE844_17950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor"
                     /protein_id="HZC03165.1"
                     /translation="MSFITKQGLALAILSIALAMPGIAAAVSYEVQLEVLEPYRELLQ
                     NNLDIYKWRDNPRLTEGLWRSLYAKAPEQIKRLMATEGYYTPMIT"
     gene            complement(276..1163)
                     /locus_tag="VE844_17955"
     CDS             complement(276..1163)
                     /locus_tag="VE844_17955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006891723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HZC03166.1"
                     /translation="MKLITFTYHGMTRPGIVIGDEDLFDVATVPDLPQDMIGLLEAGV
                     PALDRLREYREYIARGGGRLSLSQVHLEAPVKRPPKFLAIGLNYADHIEETGRERPEF
                     PTFFNKQPTCVNGPYDPIHRPRVSNQLDYEGELGFVIGRRCRHVPKERAHEVIAGYLI
                     VNDISVRDWQARAPTITLGKSFDTHGPMGPWIVTPDEIDGDPHTLDLRTLVNGQIRQS
                     SNTRHMIFDCFDQVAILSTVFTLEPGDIISTGTCSGVGVKMIPCGYLKVGDRVRVEID
                     GIGYIENLVVEEPADTVRL"
BASE COUNT          270 a          343 c          317 g          263 t
ORIGIN      
        1 ggtgatcatt ggcgtgtagt aaccctcggt cgccatcaga cgcttgatct gctctggcgc
       61 cttggcatag agactgcgcc ataagccttc cgtcagacgc ggattgtcgc gccatttata
      121 gatgtcgaga ttgttctgca atagctcccg gtagggttcc aggacctcga gctggacctc
      181 gtaacttacg gccgccgcta tccccggcat ggccagagca atgcttaaaa tggccagagc
      241 tagcccctgc ttggttataa agctcatgct tccctttaca gccgtaccgt atcagccggc
      301 tcctcgacga cgagattctc gatatagccg atcccatcga tctctacccg caccctatcc
      361 cctaccttta aataaccgca tggtatcatt ttaaccccca caccgctaca tgttccggtg
      421 gagatgatat cccccggctc cagggtaaac acggtggaaa ggatcgccac ctgatcgaag
      481 caatcgaaga tcatgtgacg ggtattggaa gactgccgga tctgaccgtt taccaaggtg
      541 cgcagatcca gggtgtgcgg atcgccgtca atctcatcgg gcgtgacgat ccagggcccc
      601 atcggcccat gggtatcaaa cgacttaccg agcgttatgg taggcgcccg cgcttgccaa
      661 tccctgaccg agatatcatt gacgatcaga taccccgcga tcacctcatg ggcgcgctct
      721 ttgggcacat gccggcaacg gcggccgatg acaaagccaa gctcaccttc ataatcaagc
      781 tggtttgaga cacgtggccg gtgtatggga tcatagggac cgtttacgca ggtcggttgt
      841 ttattgaaga aggtcggaaa ttccggccgc tcgcgcccgg tctcctcaat gtgatcggca
      901 tagttcaagc cgatggcgag aaatttgggg ggcctcttta ccggggcttc gaggtgtacc
      961 tgagacaagg ataatcgccc ccctccccgc gctatatact cacgatactc acgcaatcga
     1021 tccagggcgg gaacgcccgc ctcgagcaaa ccgatcatgt cttggggcag atccggcacg
     1081 gtggcaacat cgaagagatc ctcatcgcca atcacaatac ccgggcgggt catgccatga
     1141 taggtaaagg tgataagttt cattgatgct caggtcaggt aaatagattt aga
//
LOCUS       DASQSL010001783         1004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_162454, whole genome shotgun sequence.
ACCESSION   DASQSL010001783 DASQSL010000000
VERSION     DASQSL010001783.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162454"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            601..912
                     /locus_tag="VE844_17960"
     CDS             601..912
                     /locus_tag="VE844_17960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03167.1"
                     /translation="MLAPSSILRIWWPDDGSSGPIASGLARGLGARDAALGLGILTAV
                     LRSESSRGWLLAAAGADTADLVLTLTNAYPFSRRTRLLTLASMALYVMLQLYLAFDQD
                     S"
BASE COUNT          176 a          287 c          310 g          231 t
ORIGIN      
        1 gggggatttg gccgtgacca tccgcctggc cgacgtcgag caggctttct gcacgagcaa
       61 agcggggggg caaatcacgt atgcggattt gacgcaggcc aagccccggt tcgtcaacgt
      121 ctcgcgcggt gaagtcgcta agttcaaccg cacggtcgcg cagattatcc gctaactaag
      181 ggacagcttc ccaaaagcac tagcgccggc ttcggtttag gagggcgaac cacctttggg
      241 ccggggtcct aaaaggtgac cccggcccta actctccctt ctattcaccg tactacgtgg
      301 aacaggaatt ctcgaaagtt cgtcagcaaa ggtatgataa atgtgccacc tggcgcatgg
      361 tagtcgctgt gcaaaggtgc tagcgtgaaa gtacgatcag cgctcccgaa gggggaggat
      421 gagaacgctg agtgtcggga gcgccttttt caagacgctc cttttacctt ctcggctcga
      481 tgggccgctc gaaggcggat attccgtcct agcggttggt cctgtatatt tgtgggtgtg
      541 ttcaagcaga cggcaagggc tttggtggga ggcgggcggt tcatgtttgg cgcgggtttc
      601 gtgttggctc cttcctccat actgcggatc tggtggccgg atgacggatc atccggaccc
      661 atcgcttcgg gccttgctcg cgggctgggg gctcgggacg ccgcgttggg gctgggaatc
      721 ctgactgccg tcctgcggag cgagtcctct cgaggctggc tcttggctgc tgctggcgcc
      781 gacaccgccg acctggttct gacgttgacg aatgcctacc cttttagccg ccgtacccgg
      841 ctactgaccc tcgctagtat ggccctgtac gtgatgctgc agctctatct cgcctttgat
      901 caggacagct agaggcctcc tcagactcgc tatctaaagc agcgtcggtg atcccttcct
      961 ctgcattgtg ttctgccctc actacgtgag aacagtctag ccgc
//
LOCUS       DASQSL010001784         1851 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_27374, whole genome shotgun sequence.
ACCESSION   DASQSL010001784 DASQSL010000000
VERSION     DASQSL010001784.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27374"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            149..400
                     /locus_tag="VE844_17965"
     CDS             149..400
                     /locus_tag="VE844_17965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03168.1"
                     /translation="MQKLPLAEADTLFEELLQDLPADVAGLAREFKAFTRGRKIKTPQ
                     QLLRVVLLYCGLDQSLREVAGTLTLLGESASPTVRSSRG"
     gene            418..780
                     /locus_tag="VE844_17970"
     CDS             418..780
                     /locus_tag="VE844_17970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03169.1"
                     /translation="MKALLKRMLPELSELALPAGYRFRVIDGSSIQGLGAKGTWNRLH
                     LCIDLCSLNFTEVIVSDKHTGESVAHFALSRGDVAVLDRGYCQPQALIECMGGVLRWW
                     CAGIAPCRCGIGTVSRWI"
     gene            1042..1473
                     /locus_tag="VE844_17975"
     CDS             1042..1473
                     /locus_tag="VE844_17975"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03170.1"
                     /translation="MLALYRLRWQVELAIKRWKSLLDVDCLRAKEGSTLAQVWLHGKL
                     LYALLLERRARRLNGDQWGYLDQPRQATWWRPWKLMAQAMAPLISAVAYWQPAQWAAC
                     ITVMQERPRRRQLQRFPAAVMRLVRDAFPTGIASSLQALAP"
     gene            complement(1510..>1851)
                     /locus_tag="VE844_17980"
     CDS             complement(1510..>1851)
                     /locus_tag="VE844_17980"
                     /inference="COORDINATES: protein motif:HMM:NF024886.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage integrase N-terminal SAM-like
                     domain-containing protein"
                     /protein_id="HZC03171.1"
                     /translation="YSIRTEQSYLHWIKRFILFHDKRHPSTLGEAEVAQFLSFLANEG
                     QVAAATQNLALNALVFLYKVVLERPLAEIAGVVRAKKPQRLPVVLNRSEVAALLKQLE
                     GEYGHRRQFKG"
BASE COUNT          371 a          506 c          598 g          376 t
ORIGIN      
        1 ggtcggggga gaggatgcgg acgtgcttcg caaggacttt gccccatagg cgccagttta
       61 agggctaaga cgctgatgag gcttgactaa atggaggggg tagcgtattg catcggcctc
      121 atccaacatg aggtaacgag gttatccgat gcaaaagcta cccttagctg aagcagatac
      181 gctctttgaa gagttattgc aagacttacc ggcggacgtc gctgggttgg ctcgcgagtt
      241 caaagccttt acccgcggac gcaagatcaa aacgccccag cagctattgc gggtggtgtt
      301 gctgtactgt ggcctagatc agtcattgcg tgaggtggcg gggaccctca cgctgttagg
      361 cgagagcgca tcaccgacag ttcggtcatc acgcggctga aggcctgcga gccctgggtg
      421 aaagccttat tgaagcggat gctccctgag ctgagtgagt tagcgttgcc ggcggggtat
      481 cgttttcgcg tgattgacgg cagctctatc caaggcttgg gcgcgaaggg gacgtggaat
      541 cggttgcatc tgtgcatcga cttatgcagt ttgaacttta ccgaagtcat cgtgagcgat
      601 aagcacacgg gcgaaagcgt tgcgcacttt gcgcttagcc ggggtgatgt cgcggtgctg
      661 gatcggggct attgtcagcc gcaggcgctg atcgagtgta tggggggggt gctgaggtgg
      721 tggtgcgctg gaatagcacc atgccgctgt gggatcggga cggtcagccg ttggatttag
      781 tgcagaccct gcagcggcag gcgaccgagc agggcgtggt gacggtgccg gtgttgatgg
      841 gaccggcggc gggtcaaacc cgcgtcaggg ggtatctcca agcgtgccgc ttaccacccg
      901 accgggccga ggtggcccgt cgccgcctgc gccgcaccgc gcagaaaaaa gggcgtacag
      961 tgaagcaagc gaccttatat ctggccggct gggtggtggt gtttaccagc ttagcgccca
     1021 cggtgttagc ccacgcagac cgtgttggcc ctgtaccggc tgcgctggca agtggagctg
     1081 gcaatcaagc ggtggaagag cttgctcgat gtcgactgcc tgcgcgccaa agaaggaagc
     1141 acgctggccc aggtctggct ccatggcaag ttgctgtatg cgctgttgct ggaacgacgc
     1201 gcccggcgtc tgaacggtga tcagtggggc tatttagatc aaccccggca agcgacatgg
     1261 tggcgcccgt ggaagctgat ggcgcaagcg atggctcccc taattagcgc ggtggcatat
     1321 tggcaaccgg cgcaatgggc cgcctgtatc acggtcatgc aagagcgccc ccggcggcgc
     1381 caactccagc gcttcccagc ggcggtgatg cggctcgtgc gtgatgcctt tcctactggg
     1441 attgcctctt ccctacaggc acttgcccca tgatcggcag aagcccctac cgatcaccga
     1501 atcaaaaggt tagcccttaa actggcgcct atgcccgtat tccccctcca attgtttgag
     1561 cagcgcggcg acctcagacc gattcaatac caccggcagc cgctggggtt tcttggccct
     1621 gaccacaccg gcaatctcag cgagaggacg ctctaacaca accttgtaca aaaacaccaa
     1681 ggcatttaac gctagatttt gcgtcgccgc agccacctgc ccctcgttgg caagaaaact
     1741 gaggaactgc gctacttccg cctcacccaa ggtggacgga tgccgcttgt cgtgaaacaa
     1801 gatgaaacgc ttgatccagt ggagatagga ctgttcagtg cggatgctgt a
//
LOCUS       DASQSL010001785         2369 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_36888, whole genome shotgun sequence.
ACCESSION   DASQSL010001785 DASQSL010000000
VERSION     DASQSL010001785.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2369
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36888"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            200..1036
                     /gene="pstB"
                     /locus_tag="VE844_17985"
     CDS             200..1036
                     /gene="pstB"
                     /locus_tag="VE844_17985"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016394383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HZC03172.1"
                     /translation="MQSPSSTHAFTAAALQGREPVPEAEREVNECIRVSDLSLYYGNK
                     RALNAINLSIPEKRVTAFIGPSGCGKSTLLRCFNRMNDLYSNVRIEGAIALHGKNIYD
                     KDVNVADLRRRVGMVFQKPNPFPKTIYENVAYGLRLQGINKRRVLDRMAEKSLKAAAL
                     WDEVKDRLDDNAMGLSGGQQQRLVIARAIAIEPEVLLLDEPASALDPISTLKIEELIY
                     ELRFEYTILIVTHNMQQAARVSDYTAFMYVGDLVEFGDTNTIFTNPKQKQTEDYITGR
                     YG"
     gene            1051..1767
                     /gene="phoU"
                     /locus_tag="VE844_17990"
     CDS             1051..1767
                     /gene="phoU"
                     /locus_tag="VE844_17990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007143987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HZC03173.1"
                     /translation="MTAKQIPQHISQQFQHELEDIRSRVLEMGGLVEQQLTEALEALA
                     KHDLGLAETVATSDHKVDILEVRLDEECTEIIARRQPAASDLRLILAVIRIITDLERV
                     GDEAEKIGRMVIQLLEIEGSNSYYVGVLAMGQHVREMLNAALNAFARMDSREALQIAQ
                     QEPRIDREYDATMRQLITYMMEDPRSITRSLDVVWIARALERISDHAANICESVIYLV
                     EGKDIRHTNYETDGIVSAEV"
     gene            1828..2184
                     /locus_tag="VE844_17995"
     CDS             1828..2184
                     /locus_tag="VE844_17995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03174.1"
                     /translation="MRAWAGCILDGLDIRVPGLTTSPIIQPASLRTVDYTVPFGAFGG
                     VGARGFELTATDFGPAPQSTLDQLSTAGRVSFSPVQQKTTALETFTVGGANYDIRIAA
                     LYLERWHDELRHPAVL"
     gene            2156..>2369
                     /locus_tag="VE844_18000"
     CDS             2156..>2369
                     /locus_tag="VE844_18000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03175.1"
                     /translation="MNYDTLLFFDQTQGILPGPFSPPSTGPAYVKQSDQRSSLFYLEG
                     SSNKAGTAFYVSHLDPNLSVVRIARYA"
BASE COUNT          534 a          666 c          669 g          500 t
ORIGIN      
        1 catctatgat gtgggtttcc aaagccccaa cgtcgaagcg gcgcggccgt tggtgtatgt
       61 caccaccctg ctgttggtgc tcatcatcgt cagcctaaat ctttttgcta tacgcatccg
      121 taaccgcctg caggagagtt acagtgcggc agaccaataa ggaggagtcc ccttgaacga
      181 cccgatccaa aatcttgtta tgcagtcccc ttcgtctacc catgccttta cggccgctgc
      241 cttacaaggg agagaacccg tgcccgaagc ggagagggag gtaaacgagt gtattagggt
      301 gagtgatctg agcctctatt acggaaataa gcgggccttg aatgcgatca acctctccat
      361 cccggaaaaa cgagtaactg cctttattgg tcccagcggt tgcggcaaat cgacgctttt
      421 gcgctgtttt aaccggatga acgatctcta cagcaatgtg cggatcgaag gagctattgc
      481 cctccatggc aagaatatct acgacaaaga tgtcaatgtg gcggatctcc gccgcagggt
      541 cggcatggtg ttccagaaac ccaatccttt tcccaagacg atctatgaaa acgtggccta
      601 tggtctgcgg ctgcaaggga tcaataagcg gcgcgtcctc gatcggatgg cggaaaagtc
      661 gctcaaggcc gcggccctct gggatgaggt caaggatcgc ttggatgaca acgccatggg
      721 gctctcgggc ggacagcagc aacggctggt catcgcccgg gccattgcca tcgagcccga
      781 ggtgcttctg ctcgatgagc cggcctcggc gctggatccg atctcaacct tgaagatcga
      841 ggagctcatc tacgagcttc gattcgagta tacgatcctc attgtcaccc acaatatgca
      901 gcaggccgcg cgcgtctcgg actacaccgc ctttatgtat gtgggggatc tggtcgaatt
      961 tggcgatacc aacacgatct ttaccaatcc caaacagaaa cagaccgagg attacatcac
     1021 cggccggtat ggttagtata gagctaagcc atgacagcaa agcagatccc acaacatatc
     1081 tcccaacagt tccagcatga attggaagac atccgctcac gggtattgga gatgggcgga
     1141 ttggtggaac agcaactcac tgaggcctta gaggcgctgg ccaagcacga tctgggcttg
     1201 gccgaaacgg tggcgaccag cgatcataag gtcgatatct tggaggtgag gcttgatgaa
     1261 gaatgcaccg agatcattgc gcggcggcaa ccggcggcca gtgatctgcg cttgatcttg
     1321 gcggtgatcc ggatcattac cgatctggaa cgggtcggcg atgaggccga gaagatcggc
     1381 cggatggtaa tccagctcct ggaaatcgag ggatctaatt cctactatgt gggtgtgctg
     1441 gcgatgggtc agcatgtgcg ggaaatgctc aacgcggctt taaatgcctt tgcccgcatg
     1501 gattcaagag aggccttgca gatcgcccag caggaacccc gaatcgatcg ggaatacgat
     1561 gccaccatgc gccagcttat cacgtatatg atggaggacc cgcgcagtat cacccgatct
     1621 ctcgatgtcg tatggatcgc acgggccttg gaacgcatta gcgaccatgc ggccaacatc
     1681 tgtgagagcg tcatctatct ggtcgagggc aaggatatcc ggcacacgaa ttatgaaacc
     1741 gatgggatag tcagcgcgga ggtataagta gtagtttgtc caaaccctca agtcaccggt
     1801 cttgttgtgc gacgcggccg aataacggtg agggcttggg cgggttgcat cttagacggt
     1861 ctcgacatcc gggtccccgg tctcaccact agccccatca tccagccggc gagtctgcgc
     1921 acggtggact acacggtgcc cttcggtgcc tttggcggcg tgggcgcgcg gggttttgaa
     1981 ctcaccgcga ctgattttgg cccagcccct caaagcaccc tggaccaatt aagcacggcg
     2041 ggccgggtga gcttcagccc ggtccagcaa aaaaccactg ctctcgagac ctttacggtc
     2101 ggcggtgcga actatgacat ccggatcgcg gccttatacc tcgaacgatg gcacgatgaa
     2161 ctacgacacc ctgctgttct ttgaccagac ccaggggatc ctgcccggcc cctttagccc
     2221 tccttctacc gggcccgcct acgttaaaca gagcgaccag cggtccagcc tcttctacct
     2281 cgagggcagc agcaacaagg caggcaccgc cttctatgtt tcgcatctag atcctaatct
     2341 gtccgtcgtc cgcattgccc gctacgccg
//
LOCUS       DASQSL010001786         1220 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_199875, whole genome shotgun sequence.
ACCESSION   DASQSL010001786 DASQSL010000000
VERSION     DASQSL010001786.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1220
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199875"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1220)
                     /locus_tag="VE844_18005"
     CDS             complement(<1..>1220)
                     /locus_tag="VE844_18005"
                     /inference="COORDINATES: protein motif:HMM:NF023326.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3418 domain-containing protein"
                     /protein_id="HZC03176.1"
                     /translation="ILNQLDPARFDWLVPGLLKEKITQLIRSLPKSLRRHFVPIEHYT
                     EACLKQLKPADQSLRASLAAQLQQLTGVAIPKEAWQTERLPAYLYMNYRIVDQKGRLL
                     AEGRDLAVLQRKLGGQAQTALNQVSRWPIEREGITAWDFGELPRMVERIEQEGLKLKG
                     FPALVDKHTSVAIRVFQTGKEAALSGRPGIRRLFMLALSQEMKYLQKSLPGFGKMALY
                     YANLGQAQALQSELMAAIIDRVFLGEEWDIRSEQIFKRRLEEGKTKLMTTANQVCERV
                     AEILSRFHSLQKTLREQTSLGRSQAVAEIRDQLDHLIYRGFIATTPPQWLEQIPRYLK
                     AIALRLERLDRDPIKDRQKAARIQPLWQAYKERLKTMEEIPELVRFRWLLEEFRVSVF
                     APELGTLEPVSEAR"
BASE COUNT          258 a          337 c          338 g          287 t
ORIGIN      
        1 ccgggcctct gatacgggtt cgagagtccc aagttccgga gcaaataccg agactcgaaa
       61 ttcttccaag agccagcgga agcgcacaag ttctggtatt tcctccatag tttttaaacg
      121 ttctttatag gcttgccaga gaggctggat ccgagcagct ttttgccgat cctttatggg
      181 gtcccgatcc agtctctcca ggcgcagggc aatggccttg agataacgtg ggatctgctc
      241 gagccattgg gggggtgttg tggcgataaa acctcgatag atcagatgat ccagctgatc
      301 gcggatctcc gccaccgctt gcgaacgacc taaagaagtc tgttcccgga gggttttctg
      361 aaggctatga aaacgcgaga ggatctcggc cacacgttca cagacttggt tggctgtagt
      421 catgagcttg gtcttgccct cttccaagcg acgcttgaat atctgctcgc tgcggatatc
      481 ccactcctct ccaagaaaaa cccgatcgat gatcgccgcc ataagctcgc tttgaagcgc
      541 ttgagcctgg ccaagattgg cataatacaa ggccattttg ccaaaacccg gcaggctctt
      601 ttgcaggtat ttcatctctt gggacagcgc cagcatgaac agccgccgga tcccgggccg
      661 gcctgataaa gccgcttctt tgccggtctg aaacacccgt atggccacgg aggtgtgttt
      721 atcgaccagg gcagggaagc ccttaagctt taaaccctct tgttcgatcc tctcgaccat
      781 ccggggtagc tcaccaaaat cccaagcggt gatcccttcc cgctcgatcg gccagcgtga
      841 tacctgatta agggcggttt gcgcttgccc gccgagcttg cgctgcagca ccgccagatc
      901 ccggccttcc gcaagtaggc gtcccttttg atccacgatc cgataattca tgtacagata
      961 ggcgggtaag cgctccgttt gccaagcctc cttagggatc gcgaccccgg tcagctgctg
     1021 cagttgggcg gcgagactag ccctcaggga ttgatcggcg ggtttaagct gcttgagaca
     1081 ggcctcggtg tagtgttcta tagggacgaa gtggcggcgc aaggattttg gcaagctgcg
     1141 gatcagctgg gtgatctttt ctttcaaaag tcccggtacc agccagtcga atcgagcggg
     1201 atcaagctga ttgagtatca
//
LOCUS       DASQSL010001787         1581 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_136770, whole genome shotgun sequence.
ACCESSION   DASQSL010001787 DASQSL010000000
VERSION     DASQSL010001787.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1581
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136770"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..196
                     /locus_tag="VE844_18010"
     CDS             <1..196
                     /locus_tag="VE844_18010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03177.1"
                     /translation="GRRIAGWDVSQPRPGLALFIDISLVPVEPAIVEVVETYIQRMVM
                     PCDPTGDDLHLALASYHNSS"
     gene            complement(213..1445)
                     /locus_tag="VE844_18015"
     CDS             complement(213..1445)
                     /locus_tag="VE844_18015"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03178.1"
                     /translation="MFRIIRVPSALDKFFYPLKGRFHWAHFTYFRLLVVTMAFMWGRR
                     NVANVYRYLEAPAHRTRFNNFFLVERWDPEVALRQQAMELLRTLHPQSGEPISLVIDD
                     SKKAKRGKAMDAVSKMKDPVLDAYIQGHHYVNAILVCRDHVSPFGIRLYVKKAQCAAL
                     GLPFCKTTELAAHLIQEFTPPAGVKVMVLFDAYYLCRTVVKACREKRFPFASTLKSNR
                     TLLKLGWKLKAGRYGRNLCRRRRTASLVSAKSHASVRYRYVDAGWLEGSQLGQLHVVF
                     SRKGQARKILGLVTDAPALSAADLILTYERRWTIERFVKDAKQLLGLGQYQNRSYRAA
                     VIHLHLVCFAYALLTHLRITRDGAQGQRRDAKAADRSVAAAQDHLRGLIWDDLVAYLQ
                     EKHPDKSMLIELARLRVA"
BASE COUNT          342 a          456 c          462 g          321 t
ORIGIN      
        1 tggtcgacga atcgcaggct gggacgtttc ccaaccaaga ccaggcctag ctctcttcat
       61 cgatatttcg ttggtgcccg tggaacccgc gatcgtcgag gttgtggaaa catacattca
      121 gcggatggtc atgccctgtg atcccacagg agatgacctg cacctggcct tagcttccta
      181 tcataactca agttgactga cttgcgcgcg ctttaggcga cgcgcagtct cgccagctct
      241 atgagcatgg atttgtcagg gtgcttctcc tgcagatatg caaccaagtc atcccaaatc
      301 agcccccgaa gatggtcctg agcagccgcg acggaccggt cagcagcttt cgcatctctc
      361 cgttggcctt gtgcaccgtc gcgcgtgatg cgcaggtggg tcaggagggc gtaggcaaaa
      421 cacaccagat gcaggtgtat aactgcggcc cgataagagc ggttctggta ttggcccagc
      481 cctagcagct gcttagcgtc tttcacgaat cgctcaatcg tccaccgacg ttcataggtc
      541 agaatcaggt cagccgctga gagcgctggg gcatcggtca ccagtccgag gatcttccgg
      601 gcctgccctt tgcgcgagaa gacgacatgc agctggccca gctggctgcc ctcgagccag
      661 ccggcgtcga catagcggta ccggacgctg gcatgcgact tggcgctcac cagggaagcc
      721 gtgcggcggc ggcgacacag atttctccca tagcgaccag ctttgagctt ccagcccagt
      781 ttcaagaggg tgcggttgct tttcagtgtg gaggcaaagg gaaagcgctt ctctcgacag
      841 gccttcacga cggtgcggca gagatagtag gcgtcgaaga ggaccatcac cttcacaccg
      901 gcgggaggag tgaactcctg gatgaggtga gccgccagct ctgtggtctt gcaaaatggc
      961 aagcccaagg ccgcgcactg cgcttttttg acgtagagcc ggatgccaaa aggactcacg
     1021 tggtcacggc agaccagaat cgcattcaca tagtggtgtc cctgaatgta ggcatcaagt
     1081 accgggtctt tcatcttgga aaccgcgtcc atggccttcc cacgtttggc cttctttgag
     1141 tcatcgatga ccaaggagat gggctccccc gactgcgggt gcagggtccg gagcaactcc
     1201 atggcctgct ggcggagcgc cacctcggga tcccatcgtt ccaccaagaa gaagttattg
     1261 aagcgggtcc ggtgggctgg agcctccaga taccgataga cattggcgac attgcgccgc
     1321 ccccacataa aggccatggt cacgaccagc aagcggaagt aggtgaaatg ggcccagtga
     1381 aagcgccctt ttagcgggta aaaaaacttg tccagggcgg agggaacacg tatgatgcgg
     1441 aacatggggc aatcctccgg atcccgctgg caggcgggac atggggacac tccttcacca
     1501 gccatggagg attgcctctc cttccactat tgtcaagcct tctacacaat tgtcccccga
     1561 aaaatcagtc aacttgagta a
//
LOCUS       DASQSL010001788         1017 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_68626, whole genome shotgun sequence.
ACCESSION   DASQSL010001788 DASQSL010000000
VERSION     DASQSL010001788.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68626"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(107..388)
                     /locus_tag="VE844_18020"
     CDS             complement(107..388)
                     /locus_tag="VE844_18020"
                     /inference="COORDINATES: protein motif:HMM:NF013899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreD"
                     /protein_id="HZC03179.1"
                     /translation="MACTSTPSILRGHTVFGTLVATPANEALQAAVRERVTLSTDELF
                     SATLIDQVLVCRYLGDHAEAARWCFTNAWSMIRPGLLGRTACPPRIWRT"
     gene            complement(375..926)
                     /gene="sufT"
                     /locus_tag="VE844_18025"
     CDS             complement(375..926)
                     /gene="sufT"
                     /locus_tag="VE844_18025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013219710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative Fe-S cluster assembly protein SufT"
                     /protein_id="HZC03180.1"
                     /translation="MYHRNEAIILERDCDAVLIPSGEPITLKAGDPVYITQTLGNNYT
                     VYIHGNLARIAGHDLDALGLEPIVETFKAAASTDSSVDESLIWDQLRTCYDPEIPINI
                     VDLGLIYDCSISSLAEGGNRVEIKLTLTAPGCGMGQFLVEDVKSKIEQVPNVTEVEVE
                     LVFDPPWNYDMMSEAARLQTGMY"
BASE COUNT          223 a          290 c          266 g          238 t
ORIGIN      
        1 gagatccatc agtacccccc tttgcttaac agtcggaata tagccattat ttttattcta
       61 ttcaattaaa tcacagtcca atcaaagtga ttcggcctat cccgcgctag gtccgccaga
      121 tccgcggcgg acacgcggtg cgacctaaaa gccctggtct gatcatcgac caggcgttgg
      181 tgaaacacca gcgcgccgcc tccgcgtgat cacccaagta gcgacacacg agcacctgat
      241 cgatcaaggt ggcgctgaat agctcgtctg tactcagcgt aacacgctcg cgcactgctg
      301 cctgcaacgc ctcgttggcc ggtgttgcca ccagggtacc gaacaccgtg tggcccctta
      361 atattgacgg agtactagta catgccagtc tgaagtctgg ccgcctctga catcatgtcg
      421 taattccagg ggggatcgaa caccaattcg acctcgactt cagtgacatt gggcacttgc
      481 tcgatcttgc tttttacatc ctcgaccagg aactggccca taccacaacc cggcgcggtc
      541 aaggtcagct tgatctcgac gcggttgccg ccttctgcaa gcgaactgat ggagcaatca
      601 tagatgagac cgagatccac gatattgatg gggatctcag gatcgtagca ggtccgtagt
      661 tggtcccaga tcagggattc atccacgctg ctgtctgtcg aagcagccgc cttgaaagtc
      721 tccacaatcg gttcgaggcc caaggcatcg agatcgtgtc cggcgatccg agccagattg
      781 ccatggatgt agacggtgta gttgtttccc aaggtctgcg tgatatagac cggatccccc
      841 gcctttaagg tgataggttc accggaaggg atcaagaccg catcacaatc gcgttccagt
      901 ataatggctt cgtttctgtg gtacatgata ttggcctctt ccccctcacc cctttccctc
      961 ttctccacac gtgctggggc ttatagacga ggggataggg gtaatgggtg ttggggg
//
LOCUS       DASQSL010001789         1932 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_36897, whole genome shotgun sequence.
ACCESSION   DASQSL010001789 DASQSL010000000
VERSION     DASQSL010001789.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1932
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36897"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..250
                     /locus_tag="VE844_18030"
     CDS             <1..250
                     /locus_tag="VE844_18030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010483606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidase M20"
                     /protein_id="HZC03181.1"
                     /translation="DKASRTYFGNRAVYMGEGGSIPFMAMLGERFPQAQFLITGVLGP
                     HSNAHGPNEFLHLPTAKKLTCCVAQVIADHVRAVRGSP"
     gene            273..1199
                     /locus_tag="VE844_18035"
     CDS             273..1199
                     /locus_tag="VE844_18035"
                     /inference="COORDINATES: protein motif:HMM:TIGR00147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HZC03182.1"
                     /translation="MENPNPVRILVVLNPAGGSCDAVAVRQKLEQACAEAGLSCDLYQ
                     TNGEEGDLPAIVRQAQKRNYKTIVAAGGDGTASMVANALLESGTPLAILPVGTANLLA
                     RELNIPLDLDTACRLIAKEERTRRIDVMRVGTTIFLSHISLGVYSLIAEKTSATAKRY
                     FRQLAYLWNMLPELIGKRTWRFDLDIDGQRHRVRASFIMVANVGGIGAATLRWGPGIR
                     PDDGEINVCIVRAHTLKEYLLFAWYVLRRRHKDFSMNTYLRARRHIRIRTNKQLPIRG
                     DGEVVGHSEIDIEILPQALAIRVPDEEVESRV"
     gene            complement(1315..1620)
                     /locus_tag="VE844_18040"
     CDS             complement(1315..1620)
                     /locus_tag="VE844_18040"
                     /inference="COORDINATES: protein motif:HMM:NF023520.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3574 domain-containing protein"
                     /protein_id="HZC03183.1"
                     /translation="MESMYFGTARPSGIVTPAEWREFVNQVVTPRFPQGLTSWEASGQ
                     WQAATGVIERGASHVLHLVHPDTEESELAVNEVMNKYKAEFQQEAVLRVRSSVCMSF"
     gene            complement(1794..>1932)
                     /locus_tag="VE844_18045"
     CDS             complement(1794..>1932)
                     /locus_tag="VE844_18045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010871563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2283 domain-containing protein"
                     /protein_id="HZC03184.1"
                     /translation="VAETRDLDENTLLALDHAGNICGITVEHARDRADIPHFSFEQVA
                     A"
BASE COUNT          404 a          567 c          552 g          409 t
ORIGIN      
        1 tgataaggcc tcccgtactt acttcggcaa ccgagccgtc tatatgggtg aaggcggctc
       61 gatcccattt atggcgatgt taggtgaacg tttcccacag gcccaatttc tgatcaccgg
      121 tgtgctcggt ccccattcca atgcccatgg acccaatgaa tttctgcacc tgcctacggc
      181 gaaaaagctc acctgttgtg tggcgcaggt gatcgcggat cacgttaggg cagtgcgggg
      241 ttcaccttga gcgaccgagg cggagagaag ttatggagaa ccccaatccg gtacgcattt
      301 tggtggtatt gaatccggcc ggcggcagtt gcgatgcggt ggctgtccgg caaaagctcg
      361 agcaagcatg cgctgaggcc gggcttagct gtgatcttta ccagacaaac ggtgaagagg
      421 gagacctgcc ggcgatcgtg cgccaggcgc aaaagcgcaa ctataaaacg atcgtagcgg
      481 ccggtggcga tggcacggct tctatggtag ccaatgcatt gttagagagc ggtacaccct
      541 tggctatact gcccgttggg acagcgaatc tactggcccg cgagcttaat attcctttgg
      601 atttggatac ggcctgccgg ttgattgcca aagaggagcg cacccggcgc atcgacgtca
      661 tgcgagtagg gaccacgatt tttctctctc acattagcct gggcgtatac tctctcattg
      721 ccgagaagac ctccgcgacc gccaaacgtt attttcgcca gcttgcctat ctttggaata
      781 tgttgcccga gctgatcggt aagcgcacct ggcgttttga ccttgacatc gacggccaga
      841 ggcaccgggt gcgggcctcg tttatcatgg tcgccaacgt ggggggtata ggcgcagcta
      901 ccttacgctg ggggcctggt atccgtcccg acgatggtga gatcaatgtc tgcattgtgc
      961 gcgcacacac ccttaaggaa taccttttat ttgcgtggta tgtgctgcgg cgccggcaca
     1021 aggatttctc tatgaacact tacctgcgcg cccggcggca catcaggatc cgtaccaata
     1081 aacaactgcc gatacgaggg gatggcgaag tcgtcggaca ctcggagata gacatcgaga
     1141 tcctacctca ggccctggcc attcgggtgc ctgatgaaga ggttgaatcg cgcgtgtaag
     1201 tgatggaggg cactggttcc gtttaacgcg aagctcaggg gcgcgcggct tcatcgcgcg
     1261 cccctggagc gcaatgttag ccgccacctc acaacgcggc ttacacgacc aaggctagaa
     1321 cgacatacac acacttgagc gaaccctcaa gaccgcttcc tgctggaact ccgctttgta
     1381 cttgttcatg acctcgttaa ccgccagctc gctctcctcg gtgtctggat gaacgagatg
     1441 cagcacgtgg gacgccccgc gctcgatcac tccagtcgcg gcctgccact ggcccgatgc
     1501 ttcccacgat gttagaccct gcggaaagcg gggcgttacc acctggttca cgaactctct
     1561 ccactctgct ggcgtcacaa taccgctcgg cctggccgtg ccgaagtaca tagactccat
     1621 gacggcagac tgctcccccg gccggcaagt cggcagcggg ctcgacgcac aggctccaac
     1681 agcgagggct atggcgagga cgctacttac gcgaacccat ctcaggccag actcctacac
     1741 gcctagtggc ggctaacgca ccaaattgag cggcgtccgt ctcgaacgcc gagttaggcc
     1801 gccacttgct caaacgagaa gtggggaata tccgcacgat cccttgcgtg ctcgactgtg
     1861 ataccgcaga tgtttccagc atggtctaga gcaagcagag tattttcatc caagtccctc
     1921 gtctcagcga cc
//
LOCUS       DASQSL010001790         1365 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_68639, whole genome shotgun sequence.
ACCESSION   DASQSL010001790 DASQSL010000000
VERSION     DASQSL010001790.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1365)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1365)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1365
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68639"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..431)
                     /locus_tag="VE844_18050"
     CDS             complement(<1..431)
                     /locus_tag="VE844_18050"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03185.1"
                     /translation="MRGVCALYRQATQLHKRGIHLVSTDEKTGIQALQHTYPAKPVRA
                     GQVARLEHEYDRHGTLCLIANLEIATGRMVAPSVGPRRTEADFLAHIQQTVAQAPQDL
                     WLFIVDNLNTHQSASLVEWVAHHCGIEADLGVKDSHGILKS"
     gene            complement(432..1127)
                     /locus_tag="VE844_18055"
     CDS             complement(432..1127)
                     /locus_tag="VE844_18055"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC03186.1"
                     /translation="MVNPFYTFFIEASQHLLNHWIAGSRQVLALLGAGGKRRPTPVVV
                     DPVLGGRILLSERQERLLEALVRRSSAPQRLVKRAQMILLLAAGKRFNQLARALGVLR
                     QTVYKWGKRWRIQAQRLAEVEGQACPDHVLSGVLEGLLMDAYRAGKPATFSPEQIVKL
                     IAVACERPQDCGRPITRWSSRELAAEMVKRGIVKTIARSTLSQLLKEAKIKPHLSRYW
                     LNAQPEDEAAFDA"
BASE COUNT          267 a          410 c          406 g          282 t
ORIGIN      
        1 atggacttga ggataccgtg gctgtccttg acgccgaggt ccgcctcgat accacagtgg
       61 tgcgcgaccc attcgaccaa ggaagcggat tgatgggtat tgaggttgtc gacaatgaac
      121 agccacaggt cttggggcgc ctgggcaaca gtttgctgga tgtgggccaa aaagtcggcc
      181 tcggtgcggc gcggccccac gctgggggct accatccgcc cggtggcgat ttccaagttg
      241 gcgatcaggc acagcgtgcc atggcggtca tattcatgct caaggcgggc cacctgaccc
      301 gccctcaccg gcttggcggg gtatgtgtgt tgcaaggctt gaatacccgt tttctcatcg
      361 gtggacacga gatgaatccc acgcttatgg agttgagtgg cctggcgata gagcgcacag
      421 acaccgcgca cttaggcgtc aaaggccgcc tcgtcctccg gctgagcatt gagccagtag
      481 cgactcaggt gcggtttgat cttcgcttcc tttaacaact gactgagggt gctgcgcgcg
      541 atggtcttca caatcccccg tttgaccatc tcagcagcca actcccgcga actccagcgc
      601 gtgatcggcc ggccgcagtc ctgcggccgt tcacaggcta cggcaatcag cttgacgatc
      661 tgctcggggc tgaaggtggc gggtttgcca gcccgatagg cgtccatcag tagtccttcc
      721 aacactccgc tcagcacgtg atcggggcac gcctgcccct ccacttcggc caaccgctgc
      781 gcttgtatcc gccagcgctt accccacttg tagacggtct gacgcagcac ccccaaggcc
      841 cgcgccagtt gattaaacct cttgccggca gcgagcagta aaatcatctg ggcgcgtttg
      901 accaatcgct gcggcgcact cgagcgtctc accaacgctt ccaacaagcg ctcttgccgc
      961 tcactcaaca gaatcctccc cccgagcact gggtcaacca ccacgggcgt gggcctacgc
     1021 ttgccgcccg cgcccagcag cgccagcact tgccggctac cggcgatcca gtggttcagt
     1081 aggtgctgac tggcctcaat aaagaaggta tagaagggat tgaccataaa ggttaggttc
     1141 cttgggccaa ataatgacta ctccagcggg cctggcactg agctagcgca gggtgttcgt
     1201 ttgtgcaacc accagcagtg tatgcgaatt tctcggcagg tgtactagcg agaccgatta
     1261 tgcgattcgt gggcatagca aaaagctctc tgggattcgg gcttcttctg acgaggggaa
     1321 tggagtggaa ggctgggcta tcaacagcac tggtgttgtt ggggt
//
LOCUS       DASQSL010001791         1247 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_136789, whole genome shotgun sequence.
ACCESSION   DASQSL010001791 DASQSL010000000
VERSION     DASQSL010001791.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1247)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1247)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1247
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136789"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            11..928
                     /gene="cyoE"
                     /locus_tag="VE844_18060"
     CDS             11..928
                     /gene="cyoE"
                     /locus_tag="VE844_18060"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013820695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HZC03187.1"
                     /translation="MGRNQALLLQTSLPWREFLELCKPRVVALIIFTAIVGMFLATPN
                     GVPVGLFISATLGIGLAAASAAVINHVADHHIDALMARTKGRPLPQGQIDKYHALLLA
                     AVLGIVSMTLLVVFVNALTAILTLLSLIGYAVIYTLYLKHATPQNIVIGGAAGAAPPV
                     LGWTAVTAEVDPHALLLFLIIFAWTPPHFWPLAIYRRNEYAQAAIPMLPITHGVDFTR
                     LQILLYTVILMVVSILPFATYMSGFLYLLGALGLGGVFLYYAIRMQWDHEDRLALKTF
                     VYSIVYLSGLFFVLLIDHYLPLACQILTA"
     gene            complement(949..>1247)
                     /locus_tag="VE844_18065"
     CDS             complement(949..>1247)
                     /locus_tag="VE844_18065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013663132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HZC03188.1"
                     /translation="TAPAHYLPDLRYEPQALAENHQLKHDQESLLHSAIAELDERSRE
                     ILTKRWLSEPKSTLQELADHYQVSAERIRQLEKNAMKKLKTALGEEIALLPAPT"
BASE COUNT          207 a          358 c          340 g          342 t
ORIGIN      
        1 gggataaatc gtggggagaa atcaagcact tcttctacag acctcactcc cttggcggga
       61 gttccttgag ctctgtaaac cacgggttgt ggccctaatc atcttcaccg cgatcgtagg
      121 tatgtttctg gccaccccta atggggtgcc cgtgggtctt tttatctcag cgacgctggg
      181 cattggcctc gcggctgctt cggctgccgt tatcaatcat gtggccgatc atcatatcga
      241 tgcactgatg gcccgcacca aagggcgacc cttacctcag ggacagatcg acaaatacca
      301 tgcactcctc ttggccgccg tgcttgggat cgtatcgatg actttgctgg tggttttcgt
      361 caatgccctg accgcaattc tgaccctgct ttccttgata ggttacgccg taatctatac
      421 cctttatctc aagcatgcga ccccgcagaa catcgtgatc ggcggggctg cgggcgccgc
      481 accgcccgtc ttgggatgga ccgctgtcac cgctgaggtg gatccccatg ccttgctgtt
      541 gttcttgatc atctttgcct ggaccccccc gcatttctgg ccgctcgcga tctatcgccg
      601 gaacgagtat gcccaggccg cgatcccgat gttgccgatc acccacgggg tagatttcac
      661 ccgcctgcag atcctgcttt acaccgtgat cctcatggtc gtgagtatcc tgccttttgc
      721 gacctatatg agcgggtttt tgtatctgtt gggggccctc ggtctcggtg gcgtgttcct
      781 ctattatgcg atccgcatgc agtgggatca tgaggacagg cttgctttaa agacctttgt
      841 ctactccatt gtctatctga gcggactgtt cttcgtgctt ttaatcgatc attacttacc
      901 cttggcttgt cagatcctga ccgcgtagcg atccccttcg ctccggtttt aagtcggcgc
      961 gggcaggagg gcgatctcct cgcccaaggc cgtttttagc ttcttcatgg cattcttttc
     1021 caattgccgg atgcgttctg ctgagacctg gtagtgatcg gcgagctcct gcaaggtgga
     1081 tttcggctca ctcaaccaac gcttggtcag gatctcgcgg ctgcgctcat cgagctcggc
     1141 gatcgcgcta tggagcagcg attcctgatc gtgttttagc tgatggttct cggccagggc
     1201 ttgtggctcg taccgtaagt ccgggagata atgagcgggg gcggtta
//
LOCUS       DASQSL010001792         2603 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_107117, whole genome shotgun sequence.
ACCESSION   DASQSL010001792 DASQSL010000000
VERSION     DASQSL010001792.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2603
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107117"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            135..1517
                     /locus_tag="VE844_18070"
     CDS             135..1517
                     /locus_tag="VE844_18070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008940174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nodulation protein NfeD"
                     /protein_id="HZC03189.1"
                     /translation="MSITRIKQALVAIVLVPLLAWAQGQGPVLVLTVADAIGPATSDY
                     LHRGLERAAERGAELVVIQLDTPGGLDLSMRDIIRDIIASPVPVAVYVAPSGARAASA
                     GTYILYAAHIAAMAPATNLGAATPVRIGGIPDLTPGDEGEDKKPGDDKKPKTDEQAKP
                     KTPPPADAMDQKIVNDAVAYIRSLAQMRGRNADWAEKAVREGASLSATEALAEGVIDL
                     MAMDLQGLLKATDGREVHVQGINREIHTGKAVVERIEPDWRSRLLAVITHPNIAYILL
                     LLGIYGLFFELASPGYVLPGVIGAVCLLLALYALQVLPVNYAGLALILIGLAFMIAEA
                     FAAGFGALGMGGVIAFVIGSVILFDTEGSEYTVSIPLIASFAALSAALFWWVVSTALK
                     LHRQPAVTGMEQLVGSLGEALEDFSGAGRVRVHGESWQAFSKRRIMRDQKVRVTGLEG
                     LTLIVEPEQE"
     gene            1522..2277
                     /locus_tag="VE844_18075"
     CDS             1522..2277
                     /locus_tag="VE844_18075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011635350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="slipin family protein"
                     /protein_id="HZC03190.1"
                     /translation="MTIAIPILIFALLTLWAILNVLLEYERGVVFFLGRFQKVMGPGL
                     VIIIPGVQKIVRVDLRTVVLDVPSQDVISRDNVSVKVNAVLYFRVIDPEKAIIQVANF
                     HTATSQLAQTTLRSVLGQHELDEMLAERERLNLHIQKLLDEQTVAWGIKVNNVEIKHI
                     DLDESMIRAIAKQAEAERERRAKVIHAEGELQASQKLMQAAQILAQSPQSMQLRFLQT
                     LTEIAGEKSSVIAFPLPIDLIKPLLGVKDDTER"
     gene            complement(2280..>2603)
                     /locus_tag="VE844_18080"
     CDS             complement(2280..>2603)
                     /locus_tag="VE844_18080"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF017864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HZC03191.1"
                     /translation="MTEHPEMVSGIKRLDLALMHAGQGDWVAKAGAEGIYGIGIRSRG
                     WGLAVKIADGAARALPAVAIEILCQLGLLPAPIDLALAPFGSPPITNSRGVNTGEVRP
                     VFKLS"
BASE COUNT          553 a          734 c          787 g          529 t
ORIGIN      
        1 gataggatcc gcccaaagcc tcaactccca tcctcacctt ccccccttcc agagggaagg
       61 aaaaaaatgc ggggatatct gagaagcttt aggctatgct tacttaacag atcgtgattg
      121 tgactggacg aagcatgtca atcacacgaa taaaacaagc gctggtcgcg atagtattag
      181 ttcctctgct cgcttgggcg caaggccaag ggccggtact ggtcctgacc gtggcggatg
      241 ccattggtcc ggccaccagc gattacctgc atcgcggatt ggagcgcgct gccgagcgcg
      301 gtgccgagct tgtggtgatc cagctggaca caccgggcgg gctggatctc tctatgcgcg
      361 atatcatccg cgacatcatc gcctcacccg taccggtggc tgtctatgtg gcaccctcag
      421 gtgcgcgtgc ggcaagtgcg ggcacctata tactctatgc tgcccatatc gcggccatgg
      481 ccccggcgac caacctgggt gcggcgacac ccgtgagaat cggggggatc cccgacctca
      541 cgcccggtga tgaaggggag gataaaaagc ctggggacga taagaaaccg aaaaccgatg
      601 agcaggccaa accaaaaaca ccacctcccg ctgatgcgat ggaccaaaag atcgttaacg
      661 atgccgtggc ctatatccgc agcctcgccc agatgcgggg ccgcaatgcc gattgggctg
      721 agaaggcggt gcgtgaaggg gcaagcctat cggcgacaga ggccctggct gagggcgtga
      781 tcgatctcat ggccatggat ctgcaaggtt tacttaaagc cacagatggc cgggaggtcc
      841 acgtgcaagg gatcaaccgc gagatccaca ccggcaaggc agtggtcgag cgcatcgaac
      901 cggactggcg cagccgtctt ttggcagtga tcacccatcc caatatcgcc tacatcctgc
      961 tgttgctcgg tatctacgga ctgtttttcg agctggcgag tccagggtac gtgctccccg
     1021 gcgtgatagg ggcggtctgc ctcctgcttg ccctctacgc actgcaggtc ctgccggtca
     1081 attacgccgg gctcgcgttg atcctgatcg gtctcgcctt catgatcgcg gaagccttcg
     1141 ctgcgggttt tggtgcgctc ggtatgggcg gtgtgatcgc ctttgtgatc ggctcggtga
     1201 tcctgtttga cacagagggt agcgagtaca ccgtatccat ccccttgatc gcgagtttcg
     1261 cagccttgag cgccgccttg ttttggtggg tcgtcagtac ggctctcaag ctacacaggc
     1321 agccggcagt aacgggcatg gaacagctgg tcggtagtct gggcgaggct ctggaggatt
     1381 tttctggcgc aggccgggtg cgcgtgcacg gtgaatcctg gcaggcgttc tcgaagcgca
     1441 ggataatgcg agatcagaag gtgcgcgtga ccggtttaga gggcttgacg ttaattgttg
     1501 aaccggaaca ggagtaaaaa gatgactata gcgatcccga tccttatctt tgcgcttttg
     1561 acgctctggg cgatcctcaa cgtcctcctg gagtacgagc gcggtgtcgt gtttttcctc
     1621 gggcgtttcc aaaaggtcat gggacccggt ctcgtgatca tcattcccgg cgtgcagaag
     1681 atagtgcgtg tcgacttgcg taccgtggtc ctggatgtgc caagccaaga tgtcatctcg
     1741 cgggacaatg tctcggtcaa ggtcaacgcg gtgctctatt ttcgggtcat cgatccggag
     1801 aaggcgatca tccaggtagc caacttccat accgccacga gccaactcgc gcaaaccacg
     1861 ctgcgttctg tccttggcca gcacgagctc gatgagatgc tggcggaacg ggaaagattg
     1921 aatctgcata tccaaaagct actggacgag cagaccgtcg cctgggggat caaggtcaac
     1981 aatgtcgaga tcaagcatat cgacctcgac gagagcatga tccgggcgat tgccaagcaa
     2041 gcggaggccg agcgcgagcg gcgcgccaag gtcatccacg ccgagggtga actgcaggcc
     2101 tcgcaaaaat tgatgcaagc ggctcaaatc ctggcgcaga gccctcaatc catgcaactg
     2161 cgatttctcc agacattgac cgagatcgcg ggcgaaaaaa gctccgtgat cgcttttccc
     2221 cttccgatcg acctgatcaa gccgctgttg ggcgtcaaag atgataccga gaggtaatat
     2281 caggataatt taaagacagg ccgcacctcg cctgtgttaa cacctcggga gtttgtgatc
     2341 gggggagaac caaagggtgc gagggctagg tcgatcggtg cgggtaataa acccaattga
     2401 cataagattt cgatggccac ggcagggagg gcgcgggcgg cgccatcggc gatcttgacg
     2461 gcgaggcccc atccccgact gcggatcccg atcccgtaga taccttcggc acccgcctta
     2521 gccacccaat ccccttgacc ggcatgcatc agggcaaggt ccagccgctt gatcccggag
     2581 accatttcgg gatgctcggt cat
//
LOCUS       DASQSL010001793         1061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_117905, whole genome shotgun sequence.
ACCESSION   DASQSL010001793 DASQSL010000000
VERSION     DASQSL010001793.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1061
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117905"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          231 a          272 c          330 g          228 t
ORIGIN      
        1 tccaccgtga tgagcgtcat taacgtcttg gtggtgggaa acccgcttat ataggccttt
       61 ttctcggtga cgatagcgat gacgatcccc aggcacacaa aaaggcgccg tcatgccaaa
      121 aaccctatag gtaacgggag atgacgacca tgaagctcat aacgatgaat tgcagcgctt
      181 ctctaaaggc ggaggaacat actctcttgc tcgctgttgc agacatgtct cactcacgtg
      241 acatgcgcca ttcgtggtcc gcgaccgttt tcatcatccg gaccttctga cggtttcggt
      301 ctgagcgctc gagcgtgtag agaagagtgg cccaagagag gcgatacgac gaacggtgct
      361 agcgatctta aggggcaggt cgcgctggcg tggacggtag gtacccgcat gcctcgcggt
      421 gattcgtggg gataagcgag accgcacttg gtaccatcgt gtgctcgacg ccggaggcca
      481 cgagtaagcg agaagggtgt cgggggtatc gcctacaaag gtcgtcaggt gggctgggat
      541 cgctgtcggg ctagcgggtt tgatattctt agtctccgga agggagcatg tgggtaatga
      601 tgggtttaag ggcaaggcca gcttgaacac gctccaacta gaaaatagcg gggccgattc
      661 gagaaagtct gttcctgaat ctcggatcgg gctccctccc cgctagtgat ctagttaaga
      721 aagtggtggc tgctgagacg tttcacgctg atcttaccca caatcgggag gagggaagag
      781 ccaaagcggt ttctggcttc gctcgctgcc caagacttcc gcgacttcga gttggtcgtg
      841 gtagaccaga acccggatga caggttggcg gcggtcgtgg gcgcgtacgg ggacctatac
      901 cctatcctcc acctgcgaac aaagcgagtg ggcgcgtcgg cggcaagaaa cgaagggctc
      961 aggtactccc gttctgacct agtcgctttc cccgacgacg attgccggta cccaccagat
     1021 ctgctgaaga aggtggcgtg gttcttccat tgccatcatg a
//
LOCUS       DASQSL010001794         1599 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_92761, whole genome shotgun sequence.
ACCESSION   DASQSL010001794 DASQSL010000000
VERSION     DASQSL010001794.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92761"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..182)
                     /locus_tag="VE844_18085"
     CDS             complement(<1..182)
                     /locus_tag="VE844_18085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017364563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HZC03192.1"
                     /translation="MEILAKKLGELLKQRGYKLVTAESCTGGGLAQVVTAIAGSSRWF
                     ERGFVTYSNASKQELL"
     gene            complement(208..477)
                     /locus_tag="VE844_18090"
     CDS             complement(208..477)
                     /locus_tag="VE844_18090"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZC03193.1"
                     /translation="MSTRDTDKAAILIVDDRPEKLLAFQSILEQLGQHLILAQSGSEA
                     LKRVLEREFAVILLDVKARERAGVRWSPCKYRHRYSFSPPFSKRG"
     gene            735..1463
                     /locus_tag="VE844_18095"
     CDS             735..1463
                     /locus_tag="VE844_18095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011937661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HZC03194.1"
                     /translation="MATDHQELIKQLKDTLYTEPSIGHERYPLAMEFCEGVLTIAGEV
                     DDVATKKRALYRMAAFPQIRDIIDRIQVSPAEIMGDGAICAHVSDAMLQEPAFLNFSL
                     TARLGPQTELIRERVYDRCGAIEVSVDAGVVTLVGQVPSLSHKRLAGVLSWWVPGSRD
                     VVNTLVVEPPEEDTDDEISDAVRLVLEKDPFVNPLQVRIRTRNRVVTLDGLLPSEGER
                     DMVESDAWYVLGVDNVINRIAVGA"
BASE COUNT          354 a          450 c          449 g          346 t
ORIGIN      
        1 ctgagcaatt cctgcttgga cgcattcgaa taggtcacaa acccgcgttc gaaccagcgc
       61 gaacttccgg caatggcggt cacaacctgc gccaacccgc cgccagtgca ggactcggcg
      121 gttacgagct tgtagcctcg ctgtttcagg agttccccga gctttttagc gagtatttcc
      181 atacatcgcg atgagccact ccccctatta cccccttttg ctaaaggggg gactaaatga
      241 atacctgtgc cggtatttgc acggtgacca ccgtaccccg gcccgctccc tcgctttgac
      301 atcgagcagg atcaccgcaa actcccgctc cagcacccgc ttgagcgcct ccgagccgga
      361 ctgggcgagg atcaagtgct gccccaattg ctcgaggatg ctctgaaacg ccaacagctt
      421 ctccggccgg tcgtcgacga tgaggatagc ggccttatcg gtgtcgcgcg tactcaacgg
      481 aggcgcataa tatggatttt tatctgattc caaagccata ttcgtttaag ttaaagtgta
      541 tcatagcttg agcggtgccg cgagcaacat tggacaatgc actcccaaat agattacaaa
      601 taggggctgc gctatgccag agcatccaat cgtcaaacag ccggacggga cgtatgagca
      661 acggctcgac aacggttggg tgagtgaata gggtgaatat gggtaagaaa taaattgatt
      721 cggagaaata gactatggca acagatcatc aagaactgat taagcagcta aaagatacat
      781 tatacaccga gcccagcatc ggccatgagc ggtatccgct ggctatggaa ttctgcgagg
      841 gtgttttgac catagccggt gaggttgacg atgtagctac gaaaaaacgc gccctgtacc
      901 gtatggcggc cttccctcag atccgggaca ttatcgaccg catccaggtc agtcccgctg
      961 agatcatggg cgatggcgca atatgcgcac atgtcagcga cgccatgctg caagagcctg
     1021 cgtttttgaa ctttagcctg acggcgcgcc tcggtcccca gaccgaactg atccgcgaac
     1081 gggtatatga tcgctgtggc gcgatcgagg tctcggtcga tgcgggtgta gttaccctcg
     1141 tcggtcaagt gccaagcctt tcgcataagc gcttggccgg tgtcttgagc tggtgggtgc
     1201 cgggcagccg cgatgtcgtc aacacgcttg tcgtggagcc gcccgaggag gatacggacg
     1261 atgagatcag cgatgcggtt cgcctggtcc tggagaagga tcccttcgtt aatcccttac
     1321 aggtacgcat ccgcacccgc aatcgggtgg tcacgcttga tggtctgctt cccagcgaag
     1381 gcgagcggga catggtggaa tccgacgcct ggtacgtgct cggcgtcgac aacgtcataa
     1441 accgcatagc ggtgggcgca taaccgccca gaggcaaggc ccccatgctg tcccatggta
     1501 ttctttatca agttaattct ccgcaacatc ctccgccatc ggttgcgtag cgggcttacg
     1561 gctaccagca tcgtcgtcgc cattgctgcc tttgggatg
//
LOCUS       DASQSL010001795         1244 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_117917, whole genome shotgun sequence.
ACCESSION   DASQSL010001795 DASQSL010000000
VERSION     DASQSL010001795.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1244
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117917"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..910)
                     /locus_tag="VE844_18100"
     CDS             complement(<1..910)
                     /locus_tag="VE844_18100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03195.1"
                     /translation="MEPDYFGTEQFTDEDRAYKGSRFSEVRDALFANPYQKVWGGEGE
                     PPLPTYEITLLSVLRGILPFGRRYFFRQAVERTVDSHADLRWGADGKGFRRLIHPNGV
                     CLTGLWEITEETEYSGYFRKGSRALIIGRYSTCCTETRRGHTRSLSLVGKLYPTTDPN
                     HTEPLRTASFFTQEDLGGERTHYINDAELRNAPDTHGWRRGAGAPILLVEGALFLRFD
                     TEPAHRQLYQIAELGKANDEPTRTPQFMRLRVAPEQPRIEGEALDFRDEIMVQIFDKG
                     DPLPKRTLTFHIEVTDEGSTRGLPVFQ"
BASE COUNT          277 a          333 c          370 g          264 t
ORIGIN      
        1 gttgaaaaac aggcaggccc cgcgtcgagc cttcatcggt cacttcgatg tgaaaggtga
       61 gggtgcgttt gggcagaggg tcgcctttgt cgaagatctg caccatgatt tcatcacgga
      121 aatccaatgc ctcaccttcg attctcggct gctcgggcgc aacccgcagg cgcatgaact
      181 gcggcgttcg cgtgggttca tcgttcgctt tgccgagctc ggcgatctgg tataactggc
      241 ggtgcgcggg ttccgtatcg aagcggagaa agagcgcacc ctcaacaagc aaaatcggcg
      301 ccccagctcc gcggcgccag ccatgggtat cgggcgcgtt gcgcaattcc gcatcgttga
      361 tgtagtgggt acgttctccg ccgaggtctt cctgggtaaa gaagctggcg gtacgaagcg
      421 gctcggtgtg gttcgggtca gtggtgggat aaagcttgcc gaccagcgac agggaccgcg
      481 tgtgaccgcg ccgggtctcg gtgcagcagg tggaatagcg acctatgatt agggcccggc
      541 tgcctttacg gaaataaccc gaatactccg tttcttccgt gatctcccaa aggcccgtga
      601 ggcacacgcc gttcggatga attaagcggc ggaaaccctt cccgtccgcg ccccagcgca
      661 aatcggcgtg ggaatcgacg gttcgttcga cggcctggcg aaagaagtag cgccggccga
      721 acggcaggat accgcgcaga acgctcagca gggtgatttc gtaggtaggc aatggcggct
      781 cgccctcacc accccacact ttctggtagg gattggcgaa gagggcgtcc cgcacctcgg
      841 aaaagcgcga tcccttatac gcgcgatctt cgtcggtgaa ctgttccgtc ccaaaatagt
      901 ccggttccat acgtccctcc ctaaagatta cgttggagat tttattattc aatttatagt
      961 atagccgatt gtttccagca taaactgtgg attattcaca tttctcctgt gaaacaatca
     1021 cctgctacct gcggcgggta gcatgagggg acctcaaggg gtcaagggga aagaatctcg
     1081 gcgacagctg tgagtcagcg tcccatcaag ccggggggag gggtaacaaa tatcaagaaa
     1141 aataggggat tagtcttgca ctaacggtca atcttgaaac cggagacgag gcaaactcgc
     1201 accgctatct atgccggtta aatcgattaa atcgattaaa tcgg
//
LOCUS       DASQSL010001796         1403 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_117921, whole genome shotgun sequence.
ACCESSION   DASQSL010001796 DASQSL010000000
VERSION     DASQSL010001796.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1403
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117921"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1044)
                     /gene="recA"
                     /locus_tag="VE844_18105"
     CDS             complement(<1..1044)
                     /gene="recA"
                     /locus_tag="VE844_18105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002615377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HZC03196.1"
                     /translation="MEASRNGIDRSKDGKEKAIGLAMAQIERQFGKGAIMRLGAQPSA
                     WDVAVISTGAISLDAALGVGGIPRGRVTEIFGPEASGKTTIALHLIAEVQKTGGIAAF
                     VDAEHALDPVYAQKLGVKTDELLISQPDTGEQALEIAETLVRSGAIDVIVVDSVAALV
                     PKAEIDGEMGDAQMGLQARLMSQALRKLTGIISKSKTSMIFINQLRQKIGMFVGNPET
                     TTGGNALKFYASVRLDVRRISQVKDGDEVIGSRVRAKVVKNKVAPPFRQAEFDMMYGV
                     GISREGDLLDLASERGLVAKSGAWYAYQEERIGQGRENAKKYLKEHPDVAIALEQQLR
                     QTLGLTHAVAEPPA"
BASE COUNT          261 a          441 c          409 g          292 t
ORIGIN      
        1 tgctggaggc tcagcaacgg catgcgtcag ccccagcgtc tggcggagct gctgctcaag
       61 ggcgatggcg acgtccggat gctccttgag atatttcttg gcgttttcgc gtccctgccc
      121 gatgcgctcc tcctggtacg cataccacgc cccactcttg gccaccaagc ctcgctcact
      181 ggcgaggtcg agcagatcgc cctcgcggga gatgccgacc ccatacatca tgtcaaactc
      241 cgcttgtcgg aacgggggcg ccactttgtt cttcaccacc ttggctcgca cgcggctgcc
      301 gatgacctcg tccccatctt tgacctggct gatgcgccgg acatccaagc ggacggaggc
      361 ataaaatttc agggcattgc ccccggtggt ggtttcgggg ttgcccacaa acatgccaat
      421 tttctgccgg agctgattga tgaagatcat ggaggtcttg gacttgctga tgatgccggt
      481 gagtttccgc agggcttggg acatgaggcg cgcctgcaag cccatctgcg catcgcccat
      541 ctcgccgtcg atctcggctt tgggcaccag ggccgcgacg gaatccacca caatcacatc
      601 aatggcgccg ctgcggacca gcgtttccgc aatttcgagc gcctgctcac cggtatcggg
      661 ctgggagatg agcagctcat cggtcttcac gccgagcttc tgggcataga ccggatcgag
      721 cgcatgttcg gcatcgacaa aggccgcaat gccgccggtc ttctgcactt cggcaatgag
      781 gtgcagcgcg atggtggttt tgcccgaggc ctcggggcca aagatctcgg tgacgcgccc
      841 gcgcggaatc ccgcccaccc ccagggccgc atcgagggag atcgcgccgg tggagatgac
      901 cgcgacatcc caggcgctag gctgggcgcc caatcgcatg atggcacctt tgccgaattg
      961 ccgttcgatc tgcgccatgg ccaacccaat ggccttctcc ttcccgtcct tggaccggtc
     1021 aatgccgttt ctcgaggctt ccatgggtca ctccctgagg aggaggcaag cccccctctc
     1081 ttctcagctc tgctgccctg cgttaaatac cctctactga acttcagcat actccatggg
     1141 acgcgcgatc atccagtgtt ttcaaagaaa aaaatcccca tatccgtggg gcgcttgaga
     1201 ccacggtgat ggcggtgctg ttggagcagg agaagcggat tgcgcgactg tcacaagggt
     1261 ttcaagagat caagcggcag agagccgtct gatcccgttg cccagcctgc cccgagtgac
     1321 cgcgagtgct caccgccaca cattttctgt ggcagcacaa aaggttggct ggtaaaatca
     1381 gagcgtttgt agcgttcaat aga
//
LOCUS       DASQSL010001797         1592 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_36931, whole genome shotgun sequence.
ACCESSION   DASQSL010001797 DASQSL010000000
VERSION     DASQSL010001797.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1592
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36931"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..404
                     /locus_tag="VE844_18110"
     CDS             <1..404
                     /locus_tag="VE844_18110"
                     /inference="COORDINATES: protein motif:HMM:NF024572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZC03197.1"
                     /translation="DPSSAEANVELGMILQGEGQHRQAIAQFHKAVSQGNPEVAARAQ
                     YEIGRTYTLLKDYQQGTVELMKVAYLYPQQQRWVQRSLFEAAANYEQEQKWQEAMAVY
                     QKIVKDVPQADSREQATHKIEQLKKKLGSGA"
     gene            436..1038
                     /locus_tag="VE844_18115"
     CDS             436..1038
                     /locus_tag="VE844_18115"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HZC03198.1"
                     /translation="MIELIIKGGPVMAPILLCSVISLGIIVERCLSLRRNRVLRYEVL
                     QRIEELLRERKIPEATTLCKRYPSSMTRILLAAILNHDKSRSEIKEIIEDAGRQEVPV
                     LQRYLTILGTIASISVLLGLLGTVTGMIRTFNAIASLGYGHPEALAGGISEALVATAA
                     GLTIAIPTLVLYNFFMSKVDSLVIEMEKTSLRMLSILKRD"
     gene            1078..1494
                     /locus_tag="VE844_18120"
     CDS             1078..1494
                     /locus_tag="VE844_18120"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HZC03199.1"
                     /translation="MDLTPLRAVSISITPLVDTMLVILIFVLLLGALAVQPGIRVRLP
                     EAVTQDRESTQEVVLVLTRDDRLYLNDDPMEIAQLGARLQERLRARSDTMVIIRADKE
                     VLHGRVVEVMDIAKNAGAARLSIATEPKASGSGSRP"
BASE COUNT          325 a          458 c          490 g          319 t
ORIGIN      
        1 aggacccctc atcggcggag gctaatgtcg agctgggcat gatcctgcag ggcgaggggc
       61 agcaccgtca ggcgatcgcg caattccaca aggcggtcag ccaagggaac ccagaggtgg
      121 cggcgcgcgc gcagtatgaa atcggccgca cctatacgct gctcaaggac taccagcagg
      181 gcaccgtcga gctcatgaaa gtcgcgtatc tgtacccgca gcaacagcgc tgggtgcagc
      241 gctcgctctt cgaggccgcg gcgaactacg agcaggagca gaagtggcaa gaagccatgg
      301 cggtgtacca aaagatcgtc aaagatgtgc cccaagcaga ctcacgtgag caggcaacac
      361 acaaaatcga gcagctcaag aaaaagctag ggtcgggcgc ctgatgagcg ttgcggcagg
      421 ggacaggagg ctgcgatgat cgagctgatc atcaaggggg ggccggtcat ggctcccatt
      481 ttgctctgct cggtgatctc gttgggtatt atcgtggagc gttgcttgag cttgcgacgc
      541 aatcgcgttc tcaggtatga agtcttgcag cgcattgagg agctgctgcg cgagcgtaaa
      601 attcccgagg ccaccacgct ctgcaagcgc tacccgtcct caatgacgcg gattctgttg
      661 gcggcgatcc tgaaccatga caagagtcga tccgagatta aagagatcat tgaggacgcc
      721 gggcggcaag aggtaccggt cctgcagcgt tatctcacga ttctggggac gatcgccagc
      781 atctcggtgt tactcggctt gcttggcacg gtcacgggga tgatcaggac ctttaatgcc
      841 atcgcgtcgc tcgggtatgg ccatcccgaa gccctggcgg gtggcatctc tgaggcgctg
      901 gttgccacgg ccgcagggct gaccatcgcc atccccaccc tggtgctata caatttcttc
      961 atgagtaagg ttgactcctt ggtcattgaa atggagaaaa cctcactgcg catgctcagc
     1021 atcttgaaac gggattgaca catggacttt cgaccgtctc gacaggcgcg gggggggatg
     1081 gatttgaccc cgctcagggc tgttagcatc agcatcacgc ctctggttga tacgatgctg
     1141 gtcatactca tctttgtgtt gctcctgggt gcccttgccg tacagccggg catacgggtg
     1201 cgactgcccg aagccgtcac acaagatcgg gagtctacgc aggaggttgt cctcgtcctc
     1261 acccgcgacg accgtctcta tttaaatgac gacccgatgg agatagccca gcttggcgcc
     1321 cgtttgcagg agcgcttgcg cgctcgctcc gataccatgg tgattatcag ggcggataaa
     1381 gaagtcctgc acgggcgcgt ggtcgaagtc atggacatcg ccaagaacgc cggcgcagct
     1441 cggctttcga tcgcgacgga gccgaaagcc tccggctccg ggagcaggcc gtaatgatcc
     1501 gcgagcgcac ctctctgaac ctcgccattg gccttctgtt ctccctgctg cttcacgcct
     1561 ctgtggtgct ctggggaccg cctatctccc tg
//
LOCUS       DASQSL010001798         1273 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_52177, whole genome shotgun sequence.
ACCESSION   DASQSL010001798 DASQSL010000000
VERSION     DASQSL010001798.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1273
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52177"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..529
                     /locus_tag="VE844_18125"
     CDS             <1..529
                     /locus_tag="VE844_18125"
                     /inference="COORDINATES: protein motif:HMM:NF024252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZC03200.1"
                     /translation="PDMPTGQLIRLYRIDRKKSTTSVATHAGITVRYLEMIEAGTKTP
                     TLHVLRSIAKVLGVRTSALLGEAPSEDHEGQVNPRLAKIERALFTYGSVPLEATASQP
                     EDLDARIQVAGDAWYTSENAYSDVLALLPGLIVETEQAVRESGRSPNACKLAYNLYRL
                     IRAVLKHSGRIDFAL"
     gene            526..1194
                     /locus_tag="VE844_18130"
     CDS             526..1194
                     /locus_tag="VE844_18130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03201.1"
                     /translation="MIAERAMRYAEETEDPLTLAAASWTLGQTLLSDDMPQGALDVSL
                     ITAERLEPSLSDDKPELFSIYGGLLQCAAIAAARIGDPWRARGLLRDKAMPAARRIGE
                     GQNHQTIFFGPTNVGIHATAVELEAGEIGEALRLGNTVDISLIASLERRCAHLYHLIR
                     AYEYKNNDTAVFIHLQMAEKLRWQDFLYKNDVRTMVSTLVRRAKPSYASEVRAFADKI
                     GLLD"
BASE COUNT          269 a          366 c          381 g          257 t
ORIGIN      
        1 gcccgacatg cctaccggcc agctcatccg cctgtaccgc atcgaccgca agaagagcac
       61 gacttccgtc gctactcacg ccggtatcac ggtgcgctac ctggagatga tagaagccgg
      121 gacaaagacg ccgaccctgc acgtcctgcg cagtatcgcc aaggtcctgg gcgtgcgcac
      181 gtcggcacta ctgggtgaag cgccgagcga agaccacgag ggacaagtca acccgcgtct
      241 ggccaagata gaacgcgcgc ttttcaccta cggcagcgta ccacttgaag ctaccgccag
      301 ccagcccgag gacttggacg cccgtataca ggtcgccggt gatgcgtggt acacgtcaga
      361 aaatgcttat agtgacgtgc ttgccctgct gccgggactg atcgtggaga ctgagcaggc
      421 agtacgcgag tccgggcggt cacctaacgc atgcaagctt gcttacaacc tctatcgcct
      481 tatccgggcg gtgttaaagc actccgggcg gatcgacttt gccctatgat agccgagcgc
      541 gcgatgcgtt atgccgagga gaccgaagac ccgctgactc ttgccgctgc cagttggacg
      601 ctcgggcaaa cccttttgag cgatgatatg ccccagggcg cgcttgatgt ttccttgata
      661 actgccgagc gactggagcc atcactttcg gacgataagc cagagctttt ttccatctac
      721 ggcggtttgc tccaatgcgc tgcgatagca gccgcgcgca taggcgaccc ttggcgggcg
      781 cgtgggctgc tgcgggataa ggctatgcca gcggcgcggc gtatcggtga aggccagaac
      841 catcagacga tcttcttcgg tcctaccaac gtgggtatcc atgctacggc cgtcgagctt
      901 gaagctggtg aaatcggcga agcgttgcgt ctgggcaata cggtggatat ttcgttgatt
      961 gcttcactag aacgccgctg tgcccacttg taccacctga tacgcgccta cgagtacaag
     1021 aacaatgata cagccgtatt tatccacctg caaatggctg agaaacttcg gtggcaggac
     1081 ttcctgtata agaatgatgt acgcaccatg gtgagtacgc tggtgaggcg tgccaaaccc
     1141 tcatatgcgt ctgaggtacg ggccttcgcg gataaaatcg ggttgctgga ttaaccgcgc
     1201 gttacgccac ctagccgaag ggtctggacg atctgtgcgg atgtggggag acaagtcggc
     1261 gagctgctct gga
//
LOCUS       DASQSL010001799         3316 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_117941, whole genome shotgun sequence.
ACCESSION   DASQSL010001799 DASQSL010000000
VERSION     DASQSL010001799.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3316
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117941"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            215..787
                     /locus_tag="VE844_18135"
     CDS             215..787
                     /locus_tag="VE844_18135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03202.1"
                     /translation="MNKAAFIKIGFLLTVLLSGSKALAQEQIDDECIRKIDPYYVYFT
                     AFQPEPGSMAQRFCQKLPTVGRVITTVDYEEQALRDMKTEIRIIQVESWGDAFDEAKD
                     AQAKTVVHVPAKTYPQGALTVEHTFTEPGYFVEVLNLESQGQVRHVLRFPFQVGAGGI
                     SWVTVTITLVFFALIGAIVYYFSAQRREIT"
     gene            816..1805
                     /locus_tag="VE844_18140"
     CDS             816..1805
                     /locus_tag="VE844_18140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011814907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HZC03203.1"
                     /translation="MGAQAGAADQKLRALGRSVIETEAQALVALISRIDGNFVAACNY
                     MLACQGRIVVLGMGKSGHIGGKLAATLASTGTPAFFVHPGEASHGDMGMITAKDVTVA
                     ISNSGETDEIIVLLPLIKRLGVPLITLTGNPSSTLARAASVNIDVSVAKEACPLGLAP
                     TSSTVAALAMGDALAIALLQSRGFSAEDFALAHPGGILGRRLLLRIGDIMHRGGEMPT
                     MGPRDLLKDALVEMSRKGLGMTAIVDERLRVAGIFTDGDLRRALDRGVDVHSARMQEV
                     MTRECMTVTEACLAAEALSLMQQRRINALLIVDAERTLLGVVNMHDMLRAGVV"
     gene            1811..2341
                     /gene="kdsC"
                     /locus_tag="VE844_18145"
     CDS             1811..2341
                     /gene="kdsC"
                     /locus_tag="VE844_18145"
                     /EC_number="3.1.3.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014778626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate-8-phosphatase KdsC"
                     /protein_id="HZC03204.1"
                     /translation="MEPLDESQVQARAIKIRLVVFDVDGVLTDGRLYLGDSGEEYKVF
                     HVRDGQGLVMLRDSGVRIAVISGRSSRAVAERMVELGIDYVFQGQADKLGVFEALLND
                     VGLEPTEVAYVGDDLPDLPVMRQVGLAIAVADAHPWVKQHAHWQTRLPGGQGAVREVC
                     ELLMEAQGMLARYCAR"
     gene            2396..2968
                     /gene="lptC"
                     /locus_tag="VE844_18150"
     CDS             2396..2968
                     /gene="lptC"
                     /locus_tag="VE844_18150"
                     /inference="COORDINATES: protein motif:HMM:TIGR04409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HZC03205.1"
                     /translation="MSSRWITILGLLVVVGLTGGWLVHLEEEPMLAREAARHTPDSYM
                     HDFIRTDMDERGLVKRRLSAKYMIHFPDDGSTELLQPRLGIYTDGSNPWYVTSERGWA
                     NAGNELIRLSGVVRIWSPARQGRGKLEVITRDLEVWPKIEYAETDKAAILIGPSSITH
                     AVGLRVKLGSDRLELLHEVKSHYEVKAARE"
     gene            2973..>3316
                     /gene="lptA"
                     /locus_tag="VE844_18155"
     CDS             2973..>3316
                     /gene="lptA"
                     /locus_tag="VE844_18155"
                     /inference="COORDINATES: protein motif:HMM:TIGR03002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0001530 - lipopolysaccharide binding
                     [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HZC03206.1"
                     /translation="MLLVCCLISGLTVGLSSDPDQPIEVEADYAELDDKKRIAVYQGN
                     VVVIQGSIRLTGDTLTVTYTPEHDIKEIVLLGKPARFRQRPDNASVDTEGEAIKITYS
                     ADRDLLSLIEKA"
BASE COUNT          710 a          797 c         1035 g          774 t
ORIGIN      
        1 gtcacgctct ggcggggggg cgtgctctgg cgcgacacct tctatcctct tgaacaattg
       61 aagcgtggcc gggtatagcc aggagatcgg ctatttgttt caaatataac ccaggcaagc
      121 tatcatcaag taaattgtta aggtgggtta tcttagcatt agggaggagg agctagttag
      181 gtaataacaa cacgacttaa aggtgaggtg ggttatgaat aaggcagctt ttataaagat
      241 aggtttcttg ctcactgtcc tgctttcggg tagcaaagcg ctggcgcagg aacaaattga
      301 tgacgaatgt atccgaaaga tcgaccctta ttatgtttat ttcaccgctt tccagcccga
      361 gcccggctcg atggcgcaac ggttctgcca gaaactcccc acggtgggcc gggtaataac
      421 tacggtcgat tatgaagaac aagcgctgcg agacatgaag acggagatcc ggataatcca
      481 agttgaatcg tggggtgatg cctttgatga ggctaaggat gctcaggcga agaccgtggt
      541 ccatgtgccg gcgaagacct atccacaagg tgccctgacg gtggaacata cttttaccga
      601 acccggctac ttcgtggagg tgcttaatct tgaaagccag gggcaagtca ggcatgtatt
      661 acgctttccg ttccaagttg gagcaggtgg catttcctgg gtgacagtga caatcacctt
      721 agtgttcttc gcgctgattg gagccattgt ctattatttt tcggcgcaac gaagggagat
      781 cacctgaata acaaataacg tttataaaat ttactttggg cgcgcaagcc ggtgcggctg
      841 atcagaagct tcgggccctg ggacgctcgg tcatcgagac cgaagcccag gcgctcgtag
      901 ctttgatatc ccgcatcgat ggcaattttg tggctgcttg caactatatg cttgcttgtc
      961 aaggccggat cgtggtcttg ggcatgggta aatcgggtca tatcggcggc aagcttgcgg
     1021 caaccctcgc cagcaccggc acaccggctt tttttgtcca tccgggcgag gccagccacg
     1081 gtgatatggg catgatcacc gcaaaagatg tgaccgttgc catctccaat tcaggggaga
     1141 ccgatgagat cattgttctg cttcctttga taaaacgttt aggtgttcct ctgatcacgc
     1201 tcaccggcaa tccttcctcg acgctcgccc gcgccgcctc ggtgaacatc gatgtcagtg
     1261 tagcgaaaga ggcctgtccg ttgggacttg cgcccacctc gagcacggtg gctgcgctgg
     1321 ctatggggga tgccttggcg atcgccctgc tgcaaagccg gggcttcagc gccgaggatt
     1381 ttgccttggc tcatccgggg ggtatcttgg ggcgaagatt actcctgcgg atcggtgata
     1441 tcatgcatcg gggcggtgaa atgccgacga tgggacccag ggacctattg aaggacgcct
     1501 tggtcgagat gtcgcgcaag ggtctgggga tgacggcgat tgtcgatgag cgtttgcggg
     1561 tagcggggat ctttaccgat ggcgatctgc ggcgggccct ggatcggggg gtggatgtcc
     1621 actcggcccg gatgcaggaa gtcatgaccc gcgagtgtat gacggtaacc gaagcctgtc
     1681 tggccgccga ggctttaagc ctcatgcagc agcgtaggat caatgcgctg ttgattgtcg
     1741 atgcagagcg gaccttgctc ggtgtggtga acatgcacga tatgctccgg gctggagtag
     1801 tttaaacacc atggagccgc ttgatgagtc acaggtgcag gcacgggcga tcaagatccg
     1861 cttggtggtg ttcgacgtcg atggggtgtt gaccgatggc cgcctctatc tcggggatag
     1921 tggggaagaa tacaaggtct ttcatgtccg ggatgggcag ggcttagtga tgttgcgcga
     1981 cagtggtgta aggatcgcgg tgatctctgg ccgctcctct cgcgccgtgg ccgagcgtat
     2041 ggtggagctt gggatcgact atgtattcca gggccaagcc gataagctag gggtattcga
     2101 ggctttgctt aacgacgtgg gccttgagcc cactgaggta gcctatgtgg gggatgatct
     2161 gcccgatctg ccggtgatgc gccaagttgg gctcgccatt gccgtggccg atgcgcatcc
     2221 ctgggtcaaa cagcatgccc attggcaaac gcgtttgccg ggtggccagg gcgctgtgcg
     2281 cgaggtgtgt gagctgctca tggaagcgca agggatgctt gcaagatact gtgcgcggta
     2341 gctaaaaccc gcgtatgagt aatctctaaa ttccacgccg ccctcacggg accctgtgtc
     2401 gagccgttgg atcactatct tgggcttgct ggtggtggtg ggcctcaccg gtgggtggct
     2461 cgtgcatctt gaagaagaac ctatgcttgc cagggaagca gcgcgccata cgcccgattc
     2521 ctatatgcac gattttatcc gcaccgatat ggatgagcgt ggcttagtaa agagaaggtt
     2581 gagcgcgaag tacatgatac atttcccgga tgatggcagc accgagttgt tgcagccccg
     2641 gcttgggatt tacactgacg gctcaaaccc ctggtatgtt acctctgaac gggggtgggc
     2701 gaatgccggt aatgagctta tccggttatc cggggtggtc cggatctgga gcccggccag
     2761 gcagggcaga ggcaagctcg aggtgatcac gcgtgatctc gaggtatggc cgaagatcga
     2821 atatgccgag acggataaag cggcgatcct gatcggcccc tcttcgatta cgcatgcggt
     2881 gggtctgcgt gtcaagctcg gttcggatcg attggaatta ttacatgagg taaaaagcca
     2941 ctatgaagtt aaagccgctc gtgaatagag gggtgttgtt agtctgttgc ctcatttcgg
     3001 gactgactgt aggcttatcg agcgatccgg atcagcctat tgaggtcgag gcggattatg
     3061 cagaactcga tgataagaag cggatcgccg tctaccaagg caatgtcgtg gtgattcaag
     3121 gcagcatacg gttgaccggg gatacattga ctgtcaccta taccccggaa cacgatataa
     3181 aagagatcgt acttctcggt aaacccgccc gtttccggca acgcccggac aacgccagcg
     3241 tggatacgga aggagaggct ataaagatca cctactctgc ggatagggat ctactgtctt
     3301 tgattgagaa ggctag
//
LOCUS       DASQSL010001800         3446 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_92784, whole genome shotgun sequence.
ACCESSION   DASQSL010001800 DASQSL010000000
VERSION     DASQSL010001800.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3446
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92784"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..368)
                     /locus_tag="VE844_18160"
     CDS             complement(<1..368)
                     /locus_tag="VE844_18160"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HZC03207.1"
                     /translation="MYKNFILGRHGQIVVITLNRPEKRNPINEEMLSEFEQIVLALRD
                     DASARAVILTGTGNSFCAGADLSIVKGVTDAVERQRLFARARNRRARLIGRTFSAFEN
                     LEQVSVAAINGYAVGGGWGLA"
     gene            complement(595..1422)
                     /gene="pgeF"
                     /locus_tag="VE844_18165"
     CDS             complement(595..1422)
                     /gene="pgeF"
                     /locus_tag="VE844_18165"
                     /inference="COORDINATES: protein motif:HMM:NF014619.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HZC03208.1"
                     /translation="MGHFALETTGQLAFLTCTPIRQYGAVVHAFSTRLGGVSSLPYAS
                     LNLSVGSGDDPGHIQENRRRFSRAIGYDAADLVALRQVHGNRVAVLAAGRDPRTVRGT
                     PGDALITDRPRLPLAVITADCFPVVLAAPRLPAVGIVHSGRKGTAAQIIPTAIELMCQ
                     EFRVQPDAVFGAIGPGIGGCCYEVDAASADPFITRYSDEDAVYRPSRPGNVYLDLRRA
                     ILRQLEAVGVPPSQVWSADLCTACHPQWFYSYRREGPRSGRMLNVVMIQPTTGGAPR"
     gene            complement(1544..2731)
                     /gene="ftsZ"
                     /locus_tag="VE844_18170"
     CDS             complement(1544..2731)
                     /gene="ftsZ"
                     /locus_tag="VE844_18170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015010309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HZC03209.1"
                     /translation="MFELHEDANAPAKIKVIGIGGGGSNAINSMIQAHVEGVEFIVAN
                     TDMQALSSSLAPTKMQLGNMLTKGLGAGANPEIGKRAALEDIERISEILDGADMVFVT
                     AGMGGGTGTGAAPVITSVAKEKGCLTVAVVTKPFLFEGKRRLVQAEAGLRELRSSVDT
                     LITIPNQRLLSVVGKQTSLRDAFRICDDVLRQAVQGISDLITIPGLINLDFADVQTIM
                     AEMGMALLGTGVARGDNRAAEAAQKAISSPLLEESSIEGARGVLINITGGSDLTLFEV
                     NEASSIIKEVAHEDAQIIFGSVIDENMQGEIRVTVIATGFGYSKETTASVPLVTPSKK
                     PRVIQPRPEPQPVGVGAPASNGQIGHRPPLTERFRERVSVATVEEKSLEIPTFLRKRS
                     QTP"
     gene            complement(2989..>3446)
                     /locus_tag="VE844_18175"
     CDS             complement(2989..>3446)
                     /locus_tag="VE844_18175"
                     /inference="COORDINATES: protein motif:HMM:NF025806.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cell division FtsA domain-containing protein"
                     /protein_id="HZC03210.1"
                     /translation="YGRALQSLVDTDETIDVQGVGGKEIQPTPRKLIGEIIECRVEEI
                     FALALQRIQHHGLVQDLSAGVVITGGASVMPGMMQAAETIFELPVRLGLPAQISGLTD
                     LVNTPMYATAVGLALCGKDRLLEAEVEQSTYPGIAQAFHRIAAWVQNFF"
BASE COUNT          692 a         1049 c          978 g          727 t
ORIGIN      
        1 gccagtcccc accccccgcc gacggcatag ccattaatgg cggcgacgct cacctgctcc
       61 aggttctcga acgcgctaaa cgtgcgcccg atgagccgtg ctcgccggtt acgtgcgcgt
      121 gcgaacaagc gctgccgctc aacggcgtcg gtgaccccct tgacgatgct caaatcagcg
      181 ccggcacaaa aactgttgcc ggtgccggtc aggatcaccg cacgcgcgct ggcatcgtca
      241 cgcagtgcca gcacgatctg ttcaaattca ctcagcatct cctcattaat cggattacgc
      301 ttttccggtc gattaagcgt gatcacaacg atctggccgt gtcttcccag tatgaagttc
      361 ttgtacacac gagtgtcctc ctggctgtca tgtccgggat accctgcaag ccccccttcc
      421 ctggccagcg atgcgctggc gccagccatg catggaacat cgatgtcctg atgatagcga
      481 aggtgagcct cgtagctggc gcctgatact actggggttt gggcgattat tcaaggcaag
      541 aatggccgcc aggaatgccg cccgggcgca cctaccggcg gtcagtctag cactttagcg
      601 tggggcgccg cccgtggtgg gttgaatcat gacgacgttc aacatccgac ctgaacgcgg
      661 tccttcccga cggtaggaat aaaaccattg cggatggcag gccgtgcaaa gatccgctga
      721 ccacacctgt gaagggggca ccccgacggc ctccagttgc cggaggatgg cgcgccggag
      781 gtcgagatag acgtttcccg ggcggctggg gcggtagacc gcatcctcat ccgaatatcg
      841 ggtgatgaag gggtcggcac tggcagcgtc gacctcataa cagcacccac cgatgccagg
      901 accgatggct ccgaacaccg cgtcaggctg cacgcgaaat tcctgacaca tgagctcgat
      961 ggcggtaggt atgatctggg ctgcggtgcc ctttcgccct gaatggacga tgccgacggc
     1021 gggcaggcgg ggagcggcta ggactaccgg gaagcaatcc gcagtgatga ccgccagcgg
     1081 taaccgtgga cggtcggtga tgagcgcatc tccgggggtc cctcgtactg tgcgagggtc
     1141 tcttcccgct gctaacacgg cgactcgatt gccatgaact tgtcggagcg cgacgagatc
     1201 ggcggcatca taaccaatag cacggctaaa tcgtcggcga ttctcctgta tatgtccagg
     1261 gtcatccccg ctgcccacac tcaagttcag cgaggcgtag gggaggctac taaccccccc
     1321 caggcgtgta ctaaacgcat gcacaaccgc cccatactgg cgtatgggcg tgcaggtgag
     1381 aaatgccagc tggcctgtcg tttccagcgc gaaatgaccc atctcgcttc gcatcactcg
     1441 tccagggtat ccggcaaggg gtgtccgacc gtggcgccgg aggctgtgcc ttcaagctgc
     1501 ctccggcgtc acggtcgggt cttgcgcgag gagacaaccg tgattacggc gtctgtgacc
     1561 gcttacgcag gaaggtggga atctccaggc tcttttcctc caccgtggca acgctcacgc
     1621 gctcgcggaa gcgttcggta agcggcgggc ggtggccgat ttggccgttt gaggcgggtg
     1681 cgcctacacc caccggctgc ggttccggcc ggggttgtat aactctcggc ttcttcgatg
     1741 gcgtgacgag cggcacgctc gccgtggttt ctttggagta accgaaaccg gtggcgatca
     1801 cggtcacccg aatttcgccc tgcatgtttt cgtcgatcac ggagccgaaa atgatctggg
     1861 catcttcatg tgccacttct ttgataatgg aagatgcctc attgacctcg aagagcgtca
     1921 gatcggatcc gccggtgata ttgatcagga ccccgcgggc tccttcgatg gaagactcct
     1981 ccagcaatgg gctggaaata gctttttggg ctgcctcggc ggcccggtta tcgccacgcg
     2041 cgacccctgt tccgagtaag gccatcccca tttcagccat aatggtctgt acgtcagcga
     2101 agtccaggtt gatcaagccg gggatggtga tcaaatcgga aatcccttgc acggcttgcc
     2161 gcagaacatc gtcacaaatg cggaaagcgt cgcgcagcga cgtctgtttg cccacaacgc
     2221 tcagcagccg ctgattgggg atggtgatca gggtgtcaac gctgctccgg agttcccgca
     2281 agccggcctc ggcttgcaca agccgtcgct tcccctcaaa caagaaaggt ttcgtgacga
     2341 ccgcaacggt caagcagcct ttttccttgg cgacgctggt aatcactggc gcggcacccg
     2401 tcccggtccc gccccccatg ccggcggtga cgaagaccat gtccgctccg tcgaggatct
     2461 cagaaatccg ctcgatatct tctaacgccg ctcgcttgcc gatctccgga ttggcgccgg
     2521 cccccaagcc cttggtgagc atgttgccca gctgcatttt ggtcggtgcc aggctcgaac
     2581 tgagggcctg catgtcggtg ttggccacaa taaattctac cccttcgaca tgggcctgga
     2641 tcatggagtt aatcgcatta ctcccacccc caccgatccc aatcacttta atcttcgcgg
     2701 gtgcgttcgc gtcttcatgc aactcaaaca ttgctatccc tccctcggct atcattgtat
     2761 aagaatagtt caattacata atacgcgctc ctgacccttt ctgatcatga cacgccccta
     2821 aaaaatgtca caggccacat ggaaagtgac gagaagatcg cgcactcttg agcaaggtga
     2881 aacatgctaa agttgaaaga aaatgcagtc gtggccatga ccgtgacaga ttcagtgtcc
     2941 ttagggtacc tgacagctgt catctcttct cacaccgatc gatatttctc agaaaaaatt
     3001 ctgcacccat gccgctatac ggtgaaatgc ctgtgcaatt cccggatacg ttgattgctc
     3061 tacctctgct tcaaggagcc gatccttccc gcacaatgcg agtcccacgg cggtcgcgta
     3121 catcggggtg ttgacgagat ccgtcaatcc gctgatctgt gcgggaaggc ccaggcgcac
     3181 gggcagctcg aaaatggttt cggctgcctg catcatacct ggcatgactg acgcccctcc
     3241 ggtgatcacc acaccggcgg acaggtcttg aaccagtccg tggtgttgga tacgctgtaa
     3301 ggctagggca aagatctctt caacacggca ctcaatgatc tccccgatga gtttgcgggg
     3361 ggtcggttga atctctttgc ctcctacccc ttgcacgtcg atcgtctcat cagtatcgac
     3421 aagcgattgt aaggcacgtc cgtact
//
LOCUS       DASQSL010001801         1462 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_80302, whole genome shotgun sequence.
ACCESSION   DASQSL010001801 DASQSL010000000
VERSION     DASQSL010001801.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1462
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80302"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1044
                     /locus_tag="VE844_18180"
     CDS             <1..1044
                     /locus_tag="VE844_18180"
                     /inference="COORDINATES: protein motif:HMM:NF019348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HZC03211.1"
                     /translation="ELYDYHSRISHHPPSSALKNMNRSKIPKIPVDTEIPLPARGSWP
                     ASVHVFDEQSAWAIRAALAAQRPLLVRGEPGSGKSQLARAAAEVLERLFIAEIVHTRS
                     ESQDLQWRYDAVGRLGDAQALGATNQTPEQVRKQLNQRNYLSPGALWWVFDWESAQEQ
                     YQRGGGQYNRPVPPEDWQPLQGSVLLIDEIDKADADLPNGLLETLGNGAFSVPWLDVP
                     IGSKPSIPTPLVVITTNEERELPAAFVRRCLVLNLSLPEQKEQFLNTLVARGKVHFKE
                     HCHEDVYQEAARQLWEDRQRAETQGVTPPGQAEYIDILRVISTLEPDLDKQMELLSKI
                     SLFALKKHPILQG"
     gene            1041..>1462
                     /locus_tag="VE844_18185"
     CDS             1041..>1462
                     /locus_tag="VE844_18185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03212.1"
                     /translation="MNAPSIASKATVSRADLLRILATQGEWALERTAFALGYERKLLE
                     PAIVPQVEAVPGFSAQPPQEIKPERIERPSSLPAARFFYVTQRERHGQTAEQKLLQAP
                     EWFEKAKALTHDERPEPSTVRFPSRLPLTRWARLWPFLR"
BASE COUNT          333 a          426 c          416 g          287 t
ORIGIN      
        1 gagctttatg actatcattc gcgaatttct caccatcccc catcctcggc gttaaagaac
       61 atgaacagat ctaaaattcc caaaatcccg gttgataccg aaatcccgct gcctgcgcgc
      121 ggttcctggc ctgcctccgt gcatgtattt gatgagcaat cggcatgggc catccgtgcg
      181 gctctcgccg cgcagcgccc gctgctggtg cggggtgaac ccggcagcgg caaaagccag
      241 ttggcgcgcg cggcggcgga ggtgctcgaa cgtctattca tcgccgagat tgtacacacg
      301 cgcagtgaaa gccaggattt gcaatggcgc tacgatgccg tcgggcgctt aggcgatgca
      361 caggcgctgg gggcaacaaa ccagacgcct gaacaagtgc gcaagcaact gaatcagcgc
      421 aactatctca gccccggcgc gctgtggtgg gtgtttgact gggagtccgc gcaagaacag
      481 tatcagcgcg gtggcgggca gtataaccgg cctgtgccac ccgaagactg gcagccgcta
      541 caggggagtg tgctgctgat tgacgaaatc gacaaagccg atgccgatct tcccaacggc
      601 ctgttggaaa ccctcggcaa tggtgcgttc agtgtgccgt ggctggatgt gcccattggc
      661 agcaaaccga gtattcctac accactggtc gtcatcacca ccaatgaaga acgcgagctg
      721 cctgccgcct tcgtgcgccg ctgtctggtg ttgaacctgt ctctgccaga gcaaaaagag
      781 caattcctga atacgctggt ggcgcgtggc aaggtgcatt tcaaggagca ctgtcatgaa
      841 gatgtgtatc aggaggctgc ccgccagctc tgggaggatc ggcagagagc cgaaacacaa
      901 ggcgtgacac cgccgggaca ggctgaatat atcgacatcc tgcgtgtcat ctcaaccctt
      961 gagccagacc tcgacaaaca gatggaattg cttagcaaga ttagcctatt cgccttgaaa
     1021 aaacatccga tcttgcaggg atgaacgcgc cgagcatagc cagcaaagcc accgtcagcc
     1081 gtgctgacct gctgcgtatt cttgccacgc agggggagtg ggcgctggag agaaccgcct
     1141 ttgccttggg ctatgaacgc aagctgcttg aacctgctat cgtgccgcag gtagaggctg
     1201 tacccggatt tagcgcccaa ccaccacaag aaatcaaacc tgaacgcatc gaacgcccca
     1261 gttctttgcc cgccgctaga tttttttatg tcacccaacg ggagcgacac gggcaaacgg
     1321 cagaacagaa gctactgcaa gcgcccgaat ggtttgagaa agctaaagcg cttacccacg
     1381 atgaacgtcc ggagcccagt acagtgcgct ttccttcccg tttaccctta acccgctggg
     1441 cacggttgtg gccttttctg cg
//
LOCUS       DASQSL010001802         1141 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_199948, whole genome shotgun sequence.
ACCESSION   DASQSL010001802 DASQSL010000000
VERSION     DASQSL010001802.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199948"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            388..>1141
                     /locus_tag="VE844_18190"
     CDS             388..>1141
                     /locus_tag="VE844_18190"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid kinase"
                     /protein_id="HZC03213.1"
                     /translation="MSKRALLLINRRAGRGAPALSQAVESLHHLDFELITAPVKNAQH
                     IAARIQQYGPQLDLVIVGGGDGTLNAAVDSLVQHQLPLGILPLGTANDLARTLSIPTS
                     TPEACRVIAAGHTKSIDLGWVNGKHFFNVASLGLSVHLTESLSRGTKRRWGALAYALK
                     AIQLLRQTRAFRAEIHSQETVISVKTIQIAIGNGRYYGGGMAVADDAAIDDQRLDLYS
                     LELQYWWQAFPLLWRLPRGQQRVLPWVRVLHGH"
BASE COUNT          226 a          333 c          307 g          275 t
ORIGIN      
        1 tctgctgtgt ggatatcgtt cggcgcgttc tcatggcgcc cttactgttc tgtcccgtct
       61 cccgagcggg gaagagtagg gatgcaggag tgagaagggc aatcgtcatc aggtttctgt
      121 tggtatcgcc cagaggattg ctcagcatgt ccctcttttg gtcagacggc catggccgcc
      181 ctcttatagg tttatagcaa acactgtgcc acctccctct ttgctacttc ccattcgcgc
      241 ccaaactttt taccctctgc ttacacaatt ggaggtcagc atttgttata aagaattgat
      301 ttttgattcg cttttggttg gtttttacct gtcgaacgat cgtggtgtgt cgacagcagc
      361 gtatactttt ttcttgagtg ggacgtcatg agcaagcgcg cactgctgct tatcaatcgc
      421 cgggcaggga gaggcgcccc cgccctgtct caggctgtag aaagccttca ccacctggac
      481 tttgagctaa tcacggcgcc agtcaaaaat gcccagcaca ttgcggcacg aattcagcag
      541 tacgggccgc agttggatct cgtcatcgtg ggcggtggcg acggtacgct caatgcggcc
      601 gttgacagcc tcgtccagca ccaactcccc ctgggcatcc tacccctggg tacagctaac
      661 gacctcgccc gcaccctgtc cattcccacc tccacacctg aggcgtgtcg ggtaattgcc
      721 gctggccata ctaagtctat tgatctgggg tgggtcaacg gcaaacactt cttcaatgtg
      781 gccagtctag gattgagcgt ccacttgacc gaaagtctct cccgaggcac aaagcgccgc
      841 tggggcgctc tggcgtatgc cctcaaagcc atccaattgc ttagacaaac ccgagccttt
      901 cgagccgaga ttcactctca ggagacggtg atctccgtca agacgatcca gatcgccatt
      961 ggcaatggac gctactatgg aggcggtatg gcggtcgccg atgatgcggc gatcgatgac
     1021 caacggctcg acctatatag tctggaacta caatactggt ggcaggcctt tcccttgcta
     1081 tggcggctgc cccgaggcca gcaacgggtc ctgccatggg tacgggtcct acatggccac
     1141 g
//
LOCUS       DASQSL010001803         1025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_162558, whole genome shotgun sequence.
ACCESSION   DASQSL010001803 DASQSL010000000
VERSION     DASQSL010001803.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162558"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(191..>1025)
                     /locus_tag="VE844_18195"
     CDS             complement(191..>1025)
                     /locus_tag="VE844_18195"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HZC03214.1"
                     /translation="RGAQAAVAIMVSPIRLPLWVPLPNHSKLRKAVRQIDAVVYRMIE
                     RKLHDREIQQNVLSKLIKALQQEDPHAIDHRRLRDECTTILLAGHETTSNALTWTLYL
                     LSQHRDVLNRLQEEIAQVLGGRHPDYADVEHLKYTRMVLQESMRLYPPVPGVTRQSNE
                     ALEIGARTIPKDAIVEAIAYVTHRHPDFWTEPNRFDPERFHSDRVKLLYPGSYFPFGL
                     GPRRCIGEHMAMLEMSLVLPMLVQAFELRLVEGFKVVLHSQLTMRAQFGLVMELRARR
                     A"
BASE COUNT          234 a          280 c          285 g          226 t
ORIGIN      
        1 tgtggaagcg ttgatcgagc ggctggggct agcgccggag gcggtctatc aagtgctcga
       61 ctatacccat gccaagcaga actttactgt gcagcacaaa cccttgacca aggcctggat
      121 attacaagtc aagtccaaag cttattaaag tatcctggca tcaggttgac cgccgggctt
      181 agggccagta ttatgcccgg cgtgcgcgta actccatcac caagccgaac tgggctcgca
      241 tagtcagctg ggagtgcagg accaccttga atccctcgac caagcgaagc tcaaaggctt
      301 gcacaagcat cggcaatacc aggctcatct caagcatggc catatgctct cctatacaac
      361 gccgtggtcc aagcccaaac ggaaaatagc ttcccggata cagtagcttg actcgatcgg
      421 agtgaaatct ctcgggatca aaccgattcg gctcggtcca gaaatccgga tggcgatgcg
      481 tgacataggc gatcgcttcg acaatggcat ccttaggaat cgtgcgagca ccgatttcaa
      541 gcgcttcgtt actctgtcgg gttacgcccg gcaccggcgg atagaggcgc atagactctt
      601 gcagaaccat gcgcgtgtat tttagatgct cgacgtcggc gtaatccggg tgacgtccac
      661 cgagcacttg cgcgatctcc tcttgcagtc gattcaatac gtctcgatgt tgggaaagaa
      721 ggtaaagtgt ccatgtcaag gcgttgctcg tggtctcgtg gcccgctaac aggatggttg
      781 tgcattcatc gcgcagccga cggtgatcaa tcgcatgcgg atcctcctgc tgcagcgcct
      841 tgatgagttt cgaaagaacg ttttgttgaa tttctcgatc gtgcaactta cgctcgatca
      901 ttcggtagac gacagcgtcg atctgacgga ccgccttcct taacttcgaa tggttaggca
      961 gcgggaccca cagggggagt cgaatcggcg acaccatgat ggcgacggcg gcttgagcgc
     1021 ctcgc
//
LOCUS       DASQSL010001804         1649 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_162560, whole genome shotgun sequence.
ACCESSION   DASQSL010001804 DASQSL010000000
VERSION     DASQSL010001804.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162560"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(264..590)
                     /locus_tag="VE844_18200"
                     /pseudo
     CDS             complement(264..590)
                     /locus_tag="VE844_18200"
                     /inference="COORDINATES: protein motif:HMM:NF025126.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(618..812)
                     /locus_tag="VE844_18205"
     CDS             complement(618..812)
                     /locus_tag="VE844_18205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03215.1"
                     /translation="MRTGFLDAELLVKSPEHYGADLLGPTRLDYQWQARAGDGFDAQH
                     FQVDWGQRHATCPAGKTNIR"
     gene            complement(1161..>1649)
                     /locus_tag="VE844_18210"
     CDS             complement(1161..>1649)
                     /locus_tag="VE844_18210"
                     /inference="COORDINATES: protein motif:HMM:NF016906.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HZC03216.1"
                     /translation="DWENTNYTIRYNVVKNNKGKTAAWQGPGIWTEINPGPGLIEYNT
                     ISGNSGAGIGVLESPWVTVQKNTITGGYACIELRNLDRGSAGLHIHSATLRHNTCTNA
                     GAGIVSSIGNWKGFDMKASNVVIDQNTYSLPSQRPVVSWLGTRTFTRAETCAKLGLEC
                     MP"
BASE COUNT          339 a          493 c          454 g          363 t
ORIGIN      
        1 tgaagctcaa taatcaccct ctgacaaggc catacacacg agtggctaga taaaattgac
       61 cgcttttgat aaaaatgtat ccgggaaacg gggtttagaa tgcggacggc gagcggtccc
      121 atctgcgaaa tttaggacag ccgattggct ctcaccaatg acgatactgc tggcgaagtc
      181 gtctcgggtt atgcggcggt gccattcgcc atcagtcggg cgaacggcgt gagatgggtc
      241 ttagcccgcg aggtctccag gaatcactcg ccgagccgca acacattgag ccctacggcg
      301 gcgaggatgt gccccaggtg cacccgtcgg cggccgatgt agcgggtccg tcgcaggcgc
      361 atgctgcgtg tctcgcgcga aatcgcccct tcgatgccgg cccggcgggc atacgccgcc
      421 tgaaatgcct ccgtggcttc ccgttgccgg gccgcctgga gggcctgata ctgaggctgg
      481 ggccggacgg tgagcgtgcg ccgggggtag cgcttctgcg agcggacgca ctgggcgatg
      541 tagtcgcagc gccggcaatc gctgctcgag aacttcacct tgatgacggc attcccgcga
      601 ttatcaagag ccggcgtcta cctgatattg gtcttgccgg cgggacaggt cgcgtgccgc
      661 tggccccaat ccacctggaa gtgttgggca tcaaagccat cccctgcgcg ggcttgccac
      721 tgataatcga gacgggtggg ccccaggaga tccgcgccat agtgctccgg actcttgacc
      781 agcagctcgg cgtccagaaa gccggtcctc atctcgatag agccactggg ccacctcagg
      841 ccaattcttg ccatccatca acagcaggat actgtgatag cgcgcccgca cccgcacatc
      901 gtgcgcgcgg cgaaaggccg cccacacgtg ctcgcgcgtc acggccgtgt gcgtaatcgt
      961 caccatgttc agaccctccc tccgaaagcg ttcgctctct tataccagga gggcctgaaa
     1021 catcgggatt attttattgg atcactgtag cacagccttt ttaaatacac tgtcagaggt
     1081 ttatacctcc tataccatta ccaggaggtc ctaaaaacag gaattatttc gttggattac
     1141 tgcagaatcg tggctcgggc tcaaggcata cattcaaggc caagtttcgc acaggtttca
     1201 gctctcgtga acgttctcgt gcctaaccag ctgactaccg gacgctgtga tggtaaggaa
     1261 taggtattct gatcaatcac gacattcgac gccttcatgt caaatccctt ccaatttcca
     1321 atacttgaga cgatcccagc gccagcgttc gtgcaggtgt tgtgccgcag cgttgcgcta
     1381 tggatgtgca gaccggctga ccctcgatcc agattccgca actctatgca cgcatacccc
     1441 ccagtgatgg tattcttctg cactgtaacc catggacttt cgagcacgcc aattccggcc
     1501 ccgctattcc cggaaatagt gttgtactca atcagcccag ggccgggatt gatctcggtc
     1561 cagatgccag gcccttgcca tgccgcggtc ttgcccttat tgttcttcac tacattgtaa
     1621 cgaatggtat aattggtatt ctcccagtc
//
LOCUS       DASQSL010001805         1317 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_107180, whole genome shotgun sequence.
ACCESSION   DASQSL010001805 DASQSL010000000
VERSION     DASQSL010001805.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107180"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            173..403
                     /locus_tag="VE844_18215"
     CDS             173..403
                     /locus_tag="VE844_18215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013259956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HZC03217.1"
                     /translation="MKELVHAIAQALVDRPEEVEVREVEGEKTTVLELKVAETDLGKV
                     IGRQGRTARAIRTIVNAAATKLKKRAVLEILE"
     gene            438..932
                     /gene="rimM"
                     /locus_tag="VE844_18220"
     CDS             438..932
                     /gene="rimM"
                     /locus_tag="VE844_18220"
                     /inference="COORDINATES: protein motif:HMM:TIGR02273.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HZC03218.1"
                     /translation="MPVCRILHTHGTQGELLVAPYLNDLACYERLGEIALRLASGTSQ
                     RFGLTHVRRAGERLLIQLDGVTSVEMAQALAGLEGYVKRGALPPPPEGDFYWFDLEGL
                     TVYTEAGDYLGRIEEFFPTGSNAVLVVRKGTQETLLPFIKDVILAIDEAQGTLQIRAL
                     PGLL"
     gene            973..>1317
                     /locus_tag="VE844_18225"
     CDS             973..>1317
                     /locus_tag="VE844_18225"
                     /inference="COORDINATES: protein motif:HMM:NF013874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HZC03219.1"
                     /translation="MFVSPLQESILKRAQAKSLVQVEVHDLRQFANGRHRTTDDDPYG
                     GGPGMIMKPEPLVRGVEKLRSEDPTLYAILTCPQGDVFTQAKARALASKSALLFVCGR
                     YGGVDERVRAYVD"
BASE COUNT          285 a          342 c          430 g          260 t
ORIGIN      
        1 atcagcgttg atgaggagcg ggttcagcag tggctgaagt ggggagcaca acccacagac
       61 acggtgaaat cgctcctcgc tcgcattggg gtttggcaga aagctacgtc tacgtaatgc
      121 gtcatccctc gattcctgaa gccgcacggg gactacagcg gaggaagctg gtatgaaaga
      181 gctggtacac gctatcgctc aagccctcgt tgaccggccg gaggaagtgg aagtcaggga
      241 agtcgaggga gaaaagacga cggtgctgga actcaaagtc gcggagaccg acctgggcaa
      301 ggtgatcggg cggcaaggac ggacggctcg cgcgatacgg acgatcgtca acgcggcggc
      361 gacgaagctt aagaaacgtg cggtcctgga aatcttggag taaggctata gacgaaacag
      421 cgttcgagac aagactcgtg ccggtgtgtc gaatcctcca tacccatggc acccaggggg
      481 agctcctggt tgcgccgtac ctgaacgatt tggcatgcta cgagcgtctt ggtgagatag
      541 cactgcggct ggcatctggg acttcccaac gtttcgggct tacgcacgtg cgtcgagcgg
      601 gggagcgcct gctcatccag cttgacgggg ttacgtcggt cgaaatggcg caagcgctgg
      661 cagggctaga aggttacgtc aaacgtgggg cgcttccgcc gccaccggaa ggggacttct
      721 actggttcga tcttgagggg ctgaccgtct atacggaggc tggagattac ctcggtcgca
      781 ttgaagagtt tttcccgacc ggcagtaatg ccgtgctcgt cgtccgtaaa gggacgcagg
      841 agacattact ccccttcatt aaagatgtta tcctcgccat cgacgaggca caggggactt
      901 tgcagatccg agcccttcca gggttgctct aaagggatgc tacgctttca tgttttaacg
      961 attttccctg aaatgttcgt atcccctctg caggaaagca tcctgaaacg ggctcaggcg
     1021 aagtccttgg tacaggttga agtgcacgac ttacgtcagt tcgcgaatgg ccgtcaccgc
     1081 acgacggacg acgacccgta cggaggtggg ccggggatga tcatgaaacc cgagccactg
     1141 gtgcgggggg tggaaaagct gcggtccgag gatcccaccc tctacgcgat tctgacctgc
     1201 ccgcaggggg acgtgttcac gcaagcgaaa gcccgagcgt tggcatctaa gagcgcgctg
     1261 ttgttcgttt gcggccgcta tggcggcgtc gatgagaggg tacgggccta tgtcgat
//
LOCUS       DASQSL010001806         1024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_52217, whole genome shotgun sequence.
ACCESSION   DASQSL010001806 DASQSL010000000
VERSION     DASQSL010001806.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52217"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(238..>1024)
                     /locus_tag="VE844_18230"
     CDS             complement(238..>1024)
                     /locus_tag="VE844_18230"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZC03220.1"
                     /translation="DGHEVPLEINTSLLEDETGQTTGLLGIFRDLSLVRELEQRLRRA
                     DRLAAVGRMAATVAHEIKNPLVALKTFVDMVPRRAKDPAFIARFRDIVPKEVDRVNAI
                     MEDLLDLSRPPRLSPRPLHVEEVIRRCIALHEHQAAERGITLVEELAPDLAQVRADPE
                     YLLRALGNLTINAIQAMSAGGTLTVRSGNREPWQPTPTTKTLQGDLGAANATQPFVWI
                     SVTDTGTGMTPEQLDSLFTPFFTTKEKGTGLGLALTHKIIEEH"
BASE COUNT          196 a          275 c          331 g          222 t
ORIGIN      
        1 ctcgatcgtg gactaggttg tccatctgcg tatagcaaac ggtcaaggta tgcccgttgc
       61 gcatcgacat gctgtagagc cactcattgg catgccatat accgtgcaaa ctgcacactg
      121 gattgggcat gacctgtcgc gacgcgcgtg tgagagctat tagctgtcga tgtaggatgg
      181 cagcaggatg gtaaaggtgg atccgacacc aaactggctc tcgacgtgta gataccctta
      241 gtgctcttcg atgatcttat gggtcagggc cagcccgaga cctgtgcctt tttctttggt
      301 ggtaaagaaa ggtgtgaaga gtgaatccag ttgctcgggt gtcatgccgg tgcccgtatc
      361 tgtaacggag atccacacaa agggctgagt ggcattggca gctccgaggt caccttgcag
      421 ggtcttcgtc gtcggcgtag gctgccacgg ctctcggtta ccgctacgga cggtcagtgt
      481 ccctcctgct gacatcgcct ggatggcatt gatggtgaga ttgcccaagg cgcgcaagag
      541 gtattccggg tcggcgcgca cttgagcgag gtccggtgcc aattcctcga ccagggtaat
      601 gccgcgctcg gcagcttggt gctcgtgaag cgcgatgcag cgcctgataa cctcctcgac
      661 gtgcaagggg cgtggcgaaa ggcggggagg gcggctgagg tcgagcaaat cttccataat
      721 ggcgttgacg cgatccactt ccttgggaac gatatcgcgg aacctggcga tgaaggcggg
      781 gtccttcgcc cgacgcggca ccatgtcgac gaaggttttt agcgccacaa gcggattttt
      841 gatctcgtgc gccacggtgg cggccatacg gccgacggcc gccaggcgat cagcccgccg
      901 cagtcgctgt tctaactcgc gtacgaggga gagatcgcgg aagatgccga gcaagcccgt
      961 ggtttgaccg gtttcgtcct ccaacaggct ggtgttgatt tccaggggga cctcatggcc
     1021 gtcc
//
LOCUS       DASQSL010001807         1253 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_199962, whole genome shotgun sequence.
ACCESSION   DASQSL010001807 DASQSL010000000
VERSION     DASQSL010001807.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1253
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199962"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(73..555)
                     /gene="coaD"
                     /locus_tag="VE844_18235"
     CDS             complement(73..555)
                     /gene="coaD"
                     /locus_tag="VE844_18235"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018716573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HZC03221.1"
                     /translation="MRITVIYPGTFDPITNGHTDIVLRAARLFDRVIVAVAGSTSKKT
                     AFTLEERLALAGTALESISNVEVYPFDSLLVDAARKRGAVIILRGLRAVSDFEYEFQM
                     ANMNRRLAPELDTLFLTPAEHYSYISSSLVREIAALGGDVSEFVHPSVVEALKGRLRS
                     "
     gene            complement(573..1115)
                     /gene="rsmD"
                     /locus_tag="VE844_18240"
     CDS             complement(573..1115)
                     /gene="rsmD"
                     /locus_tag="VE844_18240"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011330797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052913 - 16S rRNA
                     (guanine(966)-N(2))-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HZC03222.1"
                     /translation="MRIIAGKWRGRQLPVSDIAGLRPSPDRVRETLFNWLQPVIVDSC
                     CLDLFAGSGALGFEAASRGAAEVVMVDRDPRVVHTLKRQAAKLEANEKIVAVICAEAL
                     GWLEGPPSRFDIVFLDPPFGQGLIGPCCQQLQARGWLKPETLIYLETEPLLIPLPLPP
                     SWRIERAKQAGQVRYYLVRS"
BASE COUNT          272 a          401 c          335 g          245 t
ORIGIN      
        1 aaacgctgga ttaacctcac gctgctcgct ggcacggact gatggtgctt aagcgccaat
       61 aaaggaacaa ccctaagatc gcaaacgtcc cttaagggcc tcaaccacac tcggatggac
      121 aaattcgctg acatcgcccc ccaaagcggc gatctcccgc accaggctcg atgatatata
      181 actgtagtgt tcggccggtg ttaaaaacag ggtatccagc tcgggggcca gtcggcggtt
      241 catattcgcc atctggaatt catattcaaa gtcggacacc gcccgcagcc cccgcagaat
      301 gatcaccgcg ccccgctttc gcgccgcatc gaccaacagg ctatcaaacg ggtatacctc
      361 gacgttgctg atcgattcca acgccgtgcc tgcaagcgcg agccgctcct ccaatgtgaa
      421 cgcggttttc ttagaggtac tgccggctac tgcgacaatc acccgatcaa acaaacgcgc
      481 ggcacgcagg acaatatccg tatggccgtt ggtgatcggg tcaaaggtgc cgggatagat
      541 gacggtgatc ctcataaggg acgcctgaat ccttaactcc gtaccagata ataccgcacc
      601 tgcccggcct gttttgcccg ctcgatccgc caagagggag gcagaggcag ggggatcagc
      661 agaggttcgg tctcgagata gatcaaggtc tcgggtttta gccagccgcg tgcttgcagc
      721 tgctggcaac aaggccctat caagccttgc ccgaacggcg gatcgaggaa tacgatatca
      781 aagcggctcg gggggccctc aagccacccc agcgcctctg cacagatcac tgcgacgatc
      841 ttctcattcg cctcaagttt ggccgcttgc cgctttaacg tgtgcactac gcgtggatca
      901 cggtctacca tgaccacctc tgctgccccg cgcgaggccg cctcaaaccc gagcgcacct
      961 gaacctgcaa atagatccag gcagcagcta tcgacgatca cgggctgtaa ccagttgaat
     1021 aatgtctccc gtacccggtc ggggctgggt ctgagccccg ctatatcgct cacgggaagc
     1081 tgtcttccac gccatttccc agcgatgatc cgcaccgcac ccggtggagg ggggagacgc
     1141 ttcgatcttc tcgcgttcag tgcctgcgtt ccagggactg cggcgcgggg ccaggcattt
     1201 tattcccact cctagccccc tcctcgccac ccacaatcac ggtgacggta ttg
//
LOCUS       DASQSL010001808         1165 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_52239, whole genome shotgun sequence.
ACCESSION   DASQSL010001808 DASQSL010000000
VERSION     DASQSL010001808.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1165
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52239"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..177)
                     /locus_tag="VE844_18245"
     CDS             complement(<1..177)
                     /locus_tag="VE844_18245"
                     /inference="COORDINATES: protein motif:HMM:NF037310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-keto-4-pentenoate hydratase"
                     /protein_id="HZC03223.1"
                     /translation="MKFASLRSTSRDGILVLVDRELNRAFPAGQTGARTLQAALDDWA
                     RIAPRLATLYFDLNQ"
     gene            complement(188..>1165)
                     /locus_tag="VE844_18250"
     CDS             complement(188..>1165)
                     /locus_tag="VE844_18250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013032271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homogentisate 1,2-dioxygenase"
                     /protein_id="HZC03224.1"
                     /translation="TGWDQVQGPLRPRAFDTTKLIKISASPWEANVLLGNQSVKLRLW
                     RTETSMEHLVRNGDGDELLFIHEGQGRLYCDYGHLAFAEGDYLMLPRGTLWRIETDAR
                     LTLLLIEATNDSYRLPDKGMVGMHAVFDPAVLDTPKIDHAFLAQQSERPWRVVVKRQS
                     LFSTVSYPFNPLDAVGWHGTLMPVRLNWRDIRPLMSHRYHVPPSAHTTFAAQRFVVCT
                     FCPRPLESDPGALRVPFYHNNDDYDEVIFYHRGQFFSRDNIHPGMMTLHPCGITHGPH
                     PKAFAAAKTRLRTETDEVAVMIDARDALDVAELAEGIEWKGYVDSWKAG"
BASE COUNT          243 a          335 c          357 g          230 t
ORIGIN      
        1 ctgattcaga tcgaaataga gcgtcgccag ccggggtgcg attcgcgccc aatcatcaag
       61 cgccgcttgc aaggtacgag cgcccgtttg cccggcagga aaggccctat tcagctccct
      121 atccaccagg accaggatgc catcgcggct agtggatctg agtgaggcaa atttcatcct
      181 gctaatttta accggctttc caggaatcta catagccctt ccactcgatg ccctctgcaa
      241 gctcggcgac atcgagtgca tcgcgggcgt cgatcatgac cgccacctca tcggtctcgg
      301 tgcgtaagcg cgttttcgcc gccgcaaaag ccttgggatg agggccgtgg gtaatgccgc
      361 agggatgcag ggtcatcatg cccggatgga tgttatcccg ggagaagaac tgaccgcgat
      421 gatagaagat cacctcgtcg taatcatcgt tattgtgata gaagggtacc cgcagcgcgc
      481 ccggatcgct ctcgaggggc ctcggacaga aggtgcagac cacaaagcgt tgggcggcaa
      541 aggtggtgtg ggccgagggc ggcacatgat agcgatggct catgagcggc cggatgtcgc
      601 gccagttgag ccgcaccggc atcagcgtcc cgtgccagcc caccgcatcg aggggattaa
      661 agggatagct cacggtgctg aagaggctct ggcgtttgac cacaacccgc caggggcgct
      721 cggactgttg tgcaagaaag gcgtgatcga tcttcggcgt atccagtacc gccgggtcaa
      781 agaccgcatg catgcccacc atccctttat cggggagccg gtagctgtca ttggtcgcct
      841 cgataagcaa gagcgtcaag cgcgcatccg tctctatgcg ccagagcgtg ccccggggca
      901 gcatcagata atcgccctcg gcaaaagcca aatggccata gtcgcaatag agccgccctt
      961 ggccctcatg gatgaatagg agctcatcgc catcgccatt gcgcacgaga tgttccattg
     1021 aggtctcggt gcgccagaga cggagcttta cgctttgatt accgaggagc acgttcgctt
     1081 cccagggtga ggcgcttatt tttatgagct tggtggtatc gaaggcgcgg ggacggagcg
     1141 ggccctgtac ctgatcccat cctgt
//
LOCUS       DASQSL010001809         1151 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_92833, whole genome shotgun sequence.
ACCESSION   DASQSL010001809 DASQSL010000000
VERSION     DASQSL010001809.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92833"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..66)
                     /gene="rrf"
                     /locus_tag="VE844_18255"
     rRNA            complement(<1..66)
                     /gene="rrf"
                     /locus_tag="VE844_18255"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(191..>1151)
                     /locus_tag="VE844_18260"
     rRNA            complement(191..>1151)
                     /locus_tag="VE844_18260"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          236 a          361 c          295 g          259 t
ORIGIN      
        1 gctgaagagc ttaacttccg tgttcgggat gggaacgggt ggtgcctctc cgctagcgtc
       61 accgggcgtg tgaaatcgga cccgccggcc ggtgccggag ggtcctcgaa ggtggaagcg
      121 tcgatctcga cgagcgcggt cattgccgcg tgattcggac gcgatccagc agcgtgctag
      181 tcgcgtgaac taggtcaagc cctcgaccat tagtaccggc ttcgctcaac gcattgctgc
      241 gcgtacacgt gcggcctatc aaacagctag tctcgctgcg gtcttacctg gttaacccag
      301 tggggaacct catcttgagg cgagcttcgc acttagatgc tttcagtgct tatcccaacc
      361 gaacatacct acccagcaat gccattggca tgacaactgg tacaacattg gttcgtccac
      421 tccggtcctc tcgtactagg agcagctcct ctcaagttcc ctacgcccac ggcggataga
      481 gaccgaactg tctcacgacg ttctgaaccc agctcgcgta ccgctttaat tggcgaacag
      541 ccaaaccctt gggacgtact tccgccccag gatgcgacga gccgacatcg aggtgccaaa
      601 cagggccgtc gatatgaact cttgggccct ataagcctgt tatccccggg gtagctttta
      661 tccgttgagt gatacccctt ccactcggag gtaccagatc actaagcccg actttcgtct
      721 ctgctcgact tgtaggtctc gcagtcaagc acccttatgc ctttgcactc tacggctggt
      781 ttccattcag cctgagggta cctttgggcg cctccgttac actttaggag gcgaccgccc
      841 cagtcaaact gcccacctga cactgtcctg cgcccggata acgggtcgcg gttagagccg
      901 aaatacaaca agggtggtat ttcaacggtg actccaccga ggctagcgcc ccagcttcaa
      961 cgtctcccac ctatcctaca catgctgaac ctcagtccaa tatcaagcta cagtaaagct
     1021 ccacggggtc tttttgccct gccgcgggta acctgcatct tcacaggtat ttcaatttcg
     1081 ccggatccct cgttgagaca gcgcccagat cgttacgcca ttcgtgcggg tcggaactta
     1141 cccgacaagg a
//
LOCUS       DASQSL010001810         1415 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_199995, whole genome shotgun sequence.
ACCESSION   DASQSL010001810 DASQSL010000000
VERSION     DASQSL010001810.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1415
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199995"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..525
                     /locus_tag="VE844_18265"
     CDS             <1..525
                     /locus_tag="VE844_18265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020560662.1"
                     /note="FabF; beta-ketoacyl-ACP synthase II, KASII;
                     catalyzes a condensation reaction in fatty acid
                     biosynthesis: addition of an acyl acceptor of two carbons
                     from malonyl-ACP; required for the elongation of
                     short-chain unsaturated acyl-ACP; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HZC03225.1"
                     /translation="MVIEEYQHAKRRDARIYAEIIGYGMSSDAYHMTAPSPSGEGAAR
                     CMANALRDAGINPEDIDYINAHGTSTPAGDKSETDAVKRVFGDHAYKLAISSTKSMIG
                     HMLGAAGGVEAIFSVLALRDQVAPPTINLFTPDPACDLDYVPHEARPMKLNTVLSNSF
                     GFGGTNGTLVFRKL"
     gene            553..1410
                     /gene="pabC"
                     /locus_tag="VE844_18270"
     CDS             553..1410
                     /gene="pabC"
                     /locus_tag="VE844_18270"
                     /EC_number="4.1.3.38"
                     /inference="COORDINATES: protein motif:HMM:NF004761.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008696 - 4-amino-4-deoxychorismate lyase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0046656 - folic acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate lyase"
                     /protein_id="HZC03226.1"
                     /translation="MSPHTLINGLEEDAITVQDRALHYGDGLFETFAVIHSEPQYWER
                     HYRRLACGCKRLKLPLPEEGLLRMEASQICRGVERGVLKFILTRGRGNRGYRFPDPMI
                     PTRLFSLYPWPDYPKNYLHHGIRVRICTMRLARNPMLAGIKHLNRLEQVLARNEWDDP
                     AIAEGLMLDTEGYVIEGTMTNLFLVWEDTLISPDLSYCGICGIMRECILEAAARLTIP
                     TLIQPVYLGDLYKAEEAFVCNSIIGIWPIRQIQVEPTHILSQSRLTSRLVEYVKRAGK
                     VCETPCLNS"
BASE COUNT          341 a          379 c          372 g          323 t
ORIGIN      
        1 atggtgatag aagaatacca gcatgcgaaa agacgtgatg ctcgtatcta cgccgagatc
       61 atcggttacg gcatgagctc agatgcctac cacatgacag caccttcccc gagcggggag
      121 ggcgctgccc gatgtatggc aaatgccttg cgagatgcag gtatcaatcc ggaggacatc
      181 gactatatta acgcccacgg tacctccacc cctgcaggag acaagtcaga gaccgatgca
      241 gtcaaaagag tgttcggcga tcatgcctat aagctcgcga taagctccac taaatccatg
      301 atcggacata tgcttggagc cgccggcggt gtggaagcta tcttttcagt gctggccttg
      361 cgggatcagg tggctccacc gaccatcaat ctgtttactc ctgatccagc gtgtgatctc
      421 gactacgtgc cccatgaggc ccgcccaatg aagctcaata cggtgctctc caactccttt
      481 ggttttggcg gcacgaatgg aacgctggtg ttcaggaagc tctaaagatc gcccacagga
      541 gggataaccc ctatgtcccc ccacaccctg ataaacggtc tagaagaaga tgccatcacc
      601 gttcaagatc gcgctctgca ctatggtgat ggactctttg aaacctttgc tgtcatccac
      661 agtgaacctc agtattggga gaggcattac cggcggctgg catgcggctg taaacgttta
      721 aagctgcctc tgcccgaaga gggattgctg cgtatggaag cctctcagat ctgtagaggg
      781 gtcgagcgtg gggtactcaa atttatcctc acccgaggaa gggggaacag aggctatcga
      841 tttcctgatc cgatgatccc aacccgcctg ttttccctct atccctggcc tgactatcca
      901 aaaaactatc ttcaccatgg gataagggta aggatctgca ccatgcggct cgcccgcaat
      961 cctatgctgg cgggcataaa acacctcaat cgccttgaac aggtcctcgc gcgtaatgaa
     1021 tgggatgatc ccgcgatcgc cgagggtctg atgctagaca ccgaagggta tgtaatcgag
     1081 ggtaccatga ccaatctgtt tctggtgtgg gaggatacac ttatcagccc cgatctctcc
     1141 tattgtggga tctgcggtat catgcgcgaa tgtatccttg aggcagcagc gcgcctcact
     1201 attcctaccc ttatccagcc cgtttacctc ggggatcttt ataaggccga ggaggcattt
     1261 gtttgcaaca gtattatcgg gatctggccg atccgtcaga tccaggtaga gcctacgcat
     1321 atactcagcc aaagccggct gacctctagg ctggtagaat atgtgaaaag agcgggtaaa
     1381 gtatgcgaaa cgccatgctt aaattcgtag ggatc
//
LOCUS       DASQSL010001811         1390 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_107232, whole genome shotgun sequence.
ACCESSION   DASQSL010001811 DASQSL010000000
VERSION     DASQSL010001811.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1390
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107232"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..192)
                     /locus_tag="VE844_18275"
     CDS             complement(<1..192)
                     /locus_tag="VE844_18275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017419617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HZC03227.1"
                     /translation="MGTSAHDEHPKGGITRWLFSTNHKDIGTLYLLFSGAMFLVGGAL
                     AMAFRLELFQPGIQLMDPLS"
     gene            complement(218..1336)
                     /gene="coxB"
                     /locus_tag="VE844_18280"
     CDS             complement(218..1336)
                     /gene="coxB"
                     /locus_tag="VE844_18280"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020409191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HZC03228.1"
                     /translation="MHTRNKQSVWLAMVLILWPIAAIADLRLNMPRGVSPISREVYDL
                     HMLILGICVVIALGVYAVMFYSIYAHRKSKGTVAAQFHENTTLEVLWTVIPALILVTM
                     AVPATRAMINMYNTAESAMTVKVTGYQWKWQYEYLDSGIGFFSTLKTPNEQIYGNETK
                     GENYLLEVDNPLVLPINTRVRFVITAADVLHAWWVPDFGWKQDAIPGFINEGWVVIEK
                     PGTYRGQCAELCSRGHGFMPVVVEAKSAEDYAKWEEEQKLKLAENQAAAAQTLSQEDL
                     MQKGQAIYNSTCASCHQAKGEGVPGVFPAIAGSTIAKGPVEDHLKIVIHGKEGTAMMP
                     FGPQLNDRDIAAVVTYERNAFGNNVGDVVQPAQAKAAR"
BASE COUNT          286 a          404 c          359 g          341 t
ORIGIN      
        1 gctcagcgga tccatgagct gtattcctgg ttgaaacagc tcgagccgga aggccatcgc
       61 tagagcgccg ccaaccagga acatagcgcc gctgaaaagc aggtaaagtg taccgatgtc
      121 cttgtgatta gtgctaaaca accaccgtgt gatcccccct ttggggtgtt cgtcgtgggc
      181 gctcgtaccc atagtttctc tctcctctgt taacagatta tcgtgcggct ttcgcttgtg
      241 cgggttgcac cacatccccc acgttattgc caaacgcatt gcgctcatag gtaacgaccg
      301 ccgctatatc gcgatcgttg agttgggggc caaagggcat catggctgtg ccttctttgc
      361 cgtggatcac gatctttaga tggtcttcca ccggaccctt ggcaatcgtg ctgccggcaa
      421 tggccgggaa tacgccgggc acaccttcgc ccttggcctg gtggcaagaa gcgcaagttg
      481 aattgtaaat cgcctgtccc ttttgcataa gatcctcttg gctcaaggtc tgtgcagccg
      541 ccgcttggtt ctcggctagc ttgagctttt gttcctcctc ccacttggca tagtcttctg
      601 cgctcttggc ttctaccacc acgggcatga agccgtgtcc gcggctacac agttcagcgc
      661 attggccccg ataggtgccc ggtttttcaa tcaccaccca gccttcattg atgaatcccg
      721 ggatagcgtc ctgcttccag ccaaagtccg gcacccacca ggcatgcagc acatcagctg
      781 cggtgatcac aaaccggacc ctggtgttga tcggtaaaac gagcggatta tcgacttcga
      841 gcaggtaatt ttctcctttg gtttcgtttc catagatctg ctcattaggg gttttcaagg
      901 tgctgaagaa gccgatgccg ctgtcgaggt attcatactg ccacttccat tgatagccgg
      961 tgaccttcac cgtcatggcc gactctgccg tattatacat attgatcatg gcgcgggtcg
     1021 caggcaccgc catcgtgacc aggataagcg cggggatcac ggtccagagg acctcgagcg
     1081 tggtgttttc atggaattgc gcggccaccg tacccttgga tttgcggtgg gcatagatcg
     1141 aataaaacat caccgcgtat accccgagtg cgatcaccac acagatcccg aggatcagca
     1201 tgtggagatc atagacttca cgcgagatcg ggctgacgcc ccgaggcata ttcaggcgaa
     1261 gatcggcgat cgccgctata ggccacagta tcaacaccat cgccagccaa accgattgtt
     1321 tattcctcgt atgcattctt tacctatttc tcagcactcg ctccaaccct gctaactggc
     1381 cggtaaggat
//
LOCUS       DASQSL010001812         1337 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_162624, whole genome shotgun sequence.
ACCESSION   DASQSL010001812 DASQSL010000000
VERSION     DASQSL010001812.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1337)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1337)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1337
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162624"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(123..752)
                     /locus_tag="VE844_18285"
     CDS             complement(123..752)
                     /locus_tag="VE844_18285"
                     /inference="COORDINATES: protein motif:HMM:NF019228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAzo13 family transposase"
                     /protein_id="HZC03229.1"
                     /translation="MGNFANKGREYRPKGQPPAVRVYDFPDKELGKVCPYGVYDMTRN
                     QGWVSVGTDHDTAQFAVESLRRWWYQMGSKVYPQADKLLITADGGGSNASRSRLWKVE
                     LQRLANDTGLTIQVCHFPPGTSKWNKIEHRMFCHIMENWRGKPLTDHEVIVNLIGNTT
                     TATGLTIQASLDKGTYPTGIKVTDQQMQELNLHPAAFHGQDWNYSIQPR"
     gene            complement(707..1294)
                     /locus_tag="VE844_18290"
                     /pseudo
     CDS             complement(707..1294)
                     /locus_tag="VE844_18290"
                     /inference="COORDINATES: protein motif:HMM:NF033519.0"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ISAzo13 family transposase"
BASE COUNT          268 a          420 c          322 g          327 t
ORIGIN      
        1 acctcctcga attcatgcac gccctgcagt ccaagaccgg ccgtcctgaa cgtctattcg
       61 acgcgatggt cgggagccat ctgcttagga ggtgtaaatt aataaatgga agcttttttc
      121 gattatctgg gctgaatact atagttccag tcctggccat gaaaagcagc gggatggagg
      181 ttcaattcct gcatctgttg atcggtgact ttgattcccg ttggataagt gcctttatcc
      241 agtgatgctt gtatagtaag accggttgct gtggttgtgt tgccaatcag attcacgatc
      301 acctcatggt ccgtgagcgg cttgccacgc cagttttcca taatatgaca gaacatccgg
      361 tgctcaattt tattccattt actggttccc ggaggaaagt gacagacctg gatcgtcagc
      421 cccgtgtcat tggccaagcg ttgtaactcg actttccaca atcgactccg gctggcattg
      481 ctgccgcccc catccgccgt aatcaatagc ttatccgcct gcggatacac tttgctgccc
      541 atctggtacc accaccgccg tagggactct accgcgaatt gagccgtgtc atgatccgtc
      601 cctacgctga cccagccttg attgcgggtc atgtcgtaaa ccccataggg acagaccttg
      661 cccaattctt tatccggaaa gtcataaaca cggaccgcag gcggctggcc tttcggccga
      721 tattcccgcc ccttattggc aaagttaccc accaactctt cttcgcgtct acggagacga
      781 ccggctgctc ggtctgctga aacgctttca cttgctcgtt gatatactca aactgggcat
      841 tgcgctcagg atgagaagcc ccttcctgaa ccttgcgggt gccttgcaga ctatagcccc
      901 gctcatccaa taagtgtgct accttcgtat ggctgacccg atggccctgg cggctcaact
      961 ccgcggctaa ccgacgggtg ctcttgcacg tccagcgcag cggtgacgtc ggatctccac
     1021 ccgtggtggg ctctaccaat ccgtccaaca ccctcagcag atccttatct tgcgccgtca
     1081 acgacttgcg acctccacct cgacgacgga cccggcggct cggggaaggt ctcatgccag
     1141 tagacgcttg taactcccgc cgcccacgcc gcacggtatt ttcccccaac cccgtggctt
     1201 ccaccaccgc tttgagtccg ccatgtccca gcactaggga ttcactggcc gcccacacgc
     1261 gacgtccacg ttcatccaac tcaggcttca gcatagcgta cttttgcctg agggcttcca
     1321 cgacaggtat tgctatc
//
LOCUS       DASQSL010001813         2334 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_200021, whole genome shotgun sequence.
ACCESSION   DASQSL010001813 DASQSL010000000
VERSION     DASQSL010001813.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2334
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200021"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1834
                     /gene="selB"
                     /locus_tag="VE844_18295"
     CDS             <1..1834
                     /gene="selB"
                     /locus_tag="VE844_18295"
                     /inference="COORDINATES: protein motif:HMM:TIGR00475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0001514 - selenocysteine incorporation
                     [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HZC03230.1"
                     /translation="DTDRLKEEKERGITIDLGFAHLRFADDTEVGVIDVPGHERFVRN
                     MLAGVGGIDLVMLVIAADEGVMPQTREHLAICQLLRIKDGLVALTKTDLVDDDWLGLV
                     TEDTHEFLKGTFLEGKPIVPVSAKTGQGIDELKRVLQTLVAGVPPKQLTGKFRLPIDR
                     VFTIRGFGTVVTGTLFSGSIRVDERVEIYPKGIEVKVRGLQVHNESVPEAVAGQRTAI
                     NLQGIEKVELERGDVLGRPGEFFPTFMLDAFLQHLPDAPRPLRHRARVRLHLGTSELM
                     GRVILLDRDELAPGEEAYVQYRLEAPAIALPRDRYVIRSYSPVQTIGGGVLLDVQPAK
                     HRRGGAGLSTHFQLLASGDPETIFAHHLKQAGHEGLRLVEFLPRTELPEMRLRQVAAA
                     LRQSGQARAVNAEAGWYLHTEAFTALTTELRNHLKNYHREYPLKPAISIEELRAKVRG
                     LGERVCLLALEALRQQGDVVVERDRVRLATHQVALDDTRERILQELEAEFLAAGYQPP
                     RAEEVFDRLKVAKGLDKQLLQVLLDQGRAVRLKDNVVFHPANLDKAESLLVQFLREHR
                     EITPIEFKDLLGISRKYAIPLLEYFDGQKITIRVGDKRVLRGAS"
     gene            2117..>2334
                     /locus_tag="VE844_18300"
     CDS             2117..>2334
                     /locus_tag="VE844_18300"
                     /inference="COORDINATES: protein motif:HMM:NF014439.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03231.1"
                     /translation="MFLGTFQLKLDDKGRLSIPVRYQKILHQKYYPASQQADFELILS
                     SIGPRISAYPRSEWEWLADALAEVTALPG"
BASE COUNT          507 a          670 c          671 g          486 t
ORIGIN      
        1 cgataccgac cgcctcaaag aggagaaaga gcgagggatc accatcgatc tcggcttcgc
       61 acacctgcgg tttgccgatg acacggaggt cggggtcatc gacgttccgg ggcatgagcg
      121 cttcgtgcgc aatatgctcg ccggcgtcgg agggattgac ctcgtgatgc tggtcattgc
      181 cgccgacgaa ggcgtgatgc cgcaaacacg tgagcacctg gctatctgtc aactcctccg
      241 cattaaagat ggcttggtgg cgctcaccaa gaccgacctc gtcgatgacg actggttagg
      301 gctcgtcacc gaagacaccc atgaattcct gaaagggacc ttcctcgagg gcaaacccat
      361 cgtccccgtg tccgccaaga ccggtcaggg catcgacgaa ctcaagcggg tattgcaaac
      421 gctggtggcg ggtgtccccc ccaagcaact cacggggaag ttccgattgc ccatcgatcg
      481 agtcttcacc attcgcggct tcggcaccgt cgtcaccggc accctgtttt cggggagcat
      541 tcgggtagac gagcgagtcg agatctaccc caaaggcatc gaggtcaaag tccgcgggct
      601 gcaagtccat aacgagagcg tccccgaggc ggtggcggga caacgcacgg cgatcaacct
      661 ccaaggcatc gagaaagtgg agctggagcg tggtgacgtg cttggccggc cgggggagtt
      721 tttcccgaca ttcatgctgg atgccttctt acagcacctt ccggatgctc cacgcccgtt
      781 acgccatcgg gcgcgcgtac gactccacct cggcaccagc gagctgatgg ggcgggtgat
      841 cttgctcgat cgcgatgagc tcgccccggg ggaagaagcc tatgtgcaat atcgcctcga
      901 ggcgccggcc attgccctac cccgtgaccg ttatgtgatc cgtagttact caccggtaca
      961 aaccatcggc gggggggtgc tcctggacgt gcagccggcc aagcatcgcc ggggaggagc
     1021 gggcttgagc actcactttc agctgttggc gtcgggcgat cctgagacca tttttgcaca
     1081 tcacctcaag caagcgggcc acgagggact ccgtctcgtg gagtttctcc cgcgtacgga
     1141 gctgccggag atgcgtttgc gccaggtggc ggctgcgctc cgccagtctg gccaggcccg
     1201 agccgtgaat gcagaagcgg gatggtatct tcatactgag gcgtttacgg ctctgaccac
     1261 tgagttgcgc aaccatctca aaaattatca ccgggaatac cccctcaaac ccgctatttc
     1321 catagaagaa ctgcgtgcga aggttcgcgg ccttggcgaa cgtgtctgcc tgcttgccct
     1381 cgaggcactc cgtcagcagg gggatgtcgt cgtcgagcgc gaccgcgtgc gtttagcgac
     1441 tcaccaagtg gccctcgatg acacccgcga acgcatcctt caagaactag aggcggaatt
     1501 tctggccgcc ggctatcaac cgccgcgcgc cgaagaggtc ttcgacaggc tcaaagtagc
     1561 caagggtctc gataaacaat tactgcaagt cctgctcgat caggggcgtg cggtgcgact
     1621 caaggataat gtggtctttc atcctgccaa ccttgacaaa gctgaatcgt tactggtgca
     1681 gttcttacgt gagcatcgcg agatcacccc gatcgaattc aaagacctac tgggtatatc
     1741 acgcaagtat gcgatcccgt tgcttgaata ctttgacggc cagaaaatca ccatccgcgt
     1801 cggtgacaag cgggttttac ggggggccag ttgatccggt tagcttctgg catctggacc
     1861 gcatgccgac tcagcccaat aatgcgtact atacaggacg gttgatcagg aagagatagc
     1921 tcccaccaaa gcaaacatct cttgacaaga gagatgtcag tctctaggat ctgcacaata
     1981 ttttcatcga ttcctatcaa agatcgtcga attacttgtt acatttttat aaaaaatcgc
     2041 ttgacaagag gtaaggcgga gggtaaggta gttcccacta agtgggagaa agtgggaaca
     2101 ggtggggctc tttggtatgt ttctggggac ctttcagctt aagctcgatg acaagggtcg
     2161 tctcagtata cctgtccggt accaaaaaat cctccaccag aaatattacc cggcatcaca
     2221 gcaggcagac tttgagctca tcctttcctc tattggccct cgtattagtg cctaccctcg
     2281 gtccgagtgg gagtggttag ccgacgcgct cgcggaagta accgccctac cagg
//
LOCUS       DASQSL010001814         1598 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_92873, whole genome shotgun sequence.
ACCESSION   DASQSL010001814 DASQSL010000000
VERSION     DASQSL010001814.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1598
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92873"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..703)
                     /locus_tag="VE844_18305"
     CDS             complement(<1..703)
                     /locus_tag="VE844_18305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018231173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HZC03232.1"
                     /translation="MFLHRLSVSVIALGLWLNVAAGWAQSLPDFTQLSEENSPAVVNI
                     GTTLKRPARKPGPEFHIPDVPEDSPFYEFFRRFFGEVPPEGPEDLQPRSSLGSGFIIS
                     KDGYVITNYHVVKDADEIVVRLNDRREFVAKVVGTDPRTDLAVLKVESDHLPAVRIGQ
                     STDLKVGEWVLAIGSPFGFEYSVTAGIVSAKGRSLPNESYVPFIQTDVAINPGNSGGP
                     LFSLDGHVVGVNSQIY"
     gene            complement(781..>1598)
                     /locus_tag="VE844_18310"
     CDS             complement(781..>1598)
                     /locus_tag="VE844_18310"
                     /inference="COORDINATES: protein motif:HMM:NF015825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MucB/RseB C-terminal domain-containing protein"
                     /protein_id="HZC03233.1"
                     /translation="ISMQVIHKAEADTEQERLISLSGPAREVIRKDGEVTCIFPDNRA
                     IMVDKTPPRRLLASTLPQPIEKIADLYSFSVLGGDRIAGRPAWVLGIVPQRPDRYGYR
                     LWIDTSTHLLLRSNVIDASGTVLEQVLFTAIDTPQHIADEMLKPSISGQGYTWYTNEP
                     PVSAGAGEKPGQWQIGWLPQGFTVQGQGVQAMAASREPVNHMLISDGLATVSVFVERF
                     TGKTDRIEELSSVGAVNTYSTVAHGYQITGVGEVPAATLRQIADSVTDLAKNP"
BASE COUNT          368 a          460 c          427 g          343 t
ORIGIN      
        1 tgtagatctg agaattcacc cccacgacat gaccgtcgag actaaataaa ggtccgcccg
       61 agttaccggg attgatggcg acatcggtct ggataaacgg cacataactc tcgttcggga
      121 gactccgccc tttagcgctg acgatcccgg ctgtgaccga gtattcaaaa ccaaagggtg
      181 agcctatggc caagacccat tcccccacct tgagatcggt cgactgcccg atcctcaccg
      241 ccggcagatg gtccgattct accttcaata ccgcaaggtc ggtgcgtggg tcggtgccca
      301 caaccttggc tacgaattcg cgccgatcat tgagcctcac cacgatctca tcggcatcct
      361 tgaccacatg atagttggtg atgacatacc catccttgga gatgatgaat cccgatccca
      421 acgatgagcg gggctgaaga tcctcaggac cctccggggg gacctctccg aaaaaccggc
      481 gaaagaactc ataaaacgga ctgtcttccg ggacatcggg gatatgaaac tcaggtcccg
      541 gtttacgtgc tggacgtttc aaggtcgtgc cgatattgac caccgctggg ctgttttcct
      601 ccgagagctg agtgaaatca ggcagggatt gggcccagcc cgccgctaca ttcagccata
      661 agccgagagc gataacgctt actgatagtc tatgtaagaa catgatatat cctaataatt
      721 accctaaatc gtgctatgaa aaacccgtgc ggggcgtgat gaaccagaaa ttgcggatga
      781 tcacggattc ttggctaggt cggtcacaga gtcggcgatt tggcgtaacg tagctgccgg
      841 cacttcaccc accccggtga tctggtaacc atgagccacg gtgctgtaag tattgacggc
      901 acctaccgaa gaaagctcct cgatccggtc ggtttttcct gtaaaccttt ctacaaagac
      961 agacacggtg gccaacccat cggagatcag catgtggttg accggctcac ggctcgctgc
     1021 catcgcctgg accccttggc cttgcacagt aaagccctga ggcagccagc ctatctgcca
     1081 ttgtcctggc ttctcacccg ctcccgcgga caccggaggc tcattagtat accaggtata
     1141 gccttgcccg ctaatcgagg gtttaagcat ttcatccgct atatgctgcg gcgtatcgat
     1201 ggcggtaaag agtacctgtt ccagcacagt gccactcgca tcgatcacgt tcgatctcag
     1261 caatagatgg gtgctcgtgt ctatccataa acgatagccg tagcgatcgg gccgctgggg
     1321 cacgatcccg agcacccagg ccggacgccc ggcgatccgg tcgccgccta aaaccgaaaa
     1381 ggaataaaga tcggcgatct tctcgatggg ctgcggtaag gtagaggcca aaagccgacg
     1441 cggaggggtt ttatcgacca tgatcgcgcg attgtccggg aagatgcagg tgacctcgcc
     1501 atcttttcta atcacctcgc gggcgggacc gctgagcgag ataaggcgct cctgttctgt
     1561 atcggcctcc gctttatgga tcacctgcat actgatcg
//
LOCUS       DASQSL010001815         1834 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_172392, whole genome shotgun sequence.
ACCESSION   DASQSL010001815 DASQSL010000000
VERSION     DASQSL010001815.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1834)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1834)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1834
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172392"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            477..>1834
                     /locus_tag="VE844_18315"
     CDS             477..>1834
                     /locus_tag="VE844_18315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017314043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZC03234.1"
                     /translation="MPTSELVTTQHLTRKAMIYIRQSTPHQVLTNQESLSLQYALKQR
                     ALSLGWFEADIEIIDTDLGLTGAAAHHREGFKELLTKVTLGQVGIILSSEVTRLSRNC
                     SDWYPLLDICGFKGCLIADRDGIYDPATPNGHLLLGLKGTLSEMELYTIRARMHAGLL
                     NKAQRGDLALQLPVGLMRDELGRVQKHPSREVQQRIELVFQTFLQRRTQAKVLQYFNQ
                     QHLQLPRRDRFGDMLWKPPTVSAIISILKNPAYAGAFVYGKTRCLRHGSAPQHADIKR
                     LPVEEWKIRVNDKYPAYVSWETFEKIQLMLYDNYAEYDRNKTRGIPRAGQALLHGLLY
                     CGECGHKMMVQYKHGTDSLCNHLRQQYGVPVCQNIPGGPVDQAVIKAFFEALSPIELD
                     VYARALAAHKQSADQADQARQQQIERLRYQAALAQRQFNRVDPDNRLVAAELEARWEA
                     ALR"
BASE COUNT          427 a          567 c          442 g          398 t
ORIGIN      
        1 gagtatctgc ttaatgagat ggagtacctg cgggtcttga acccgccttg cgattttgtc
       61 cagtaaagtc gagtgccgaa tcatgtcaaa cgactgtaca acttaatacc cctttcaata
      121 acccagaacc agaagaagtg acctttattg aggtcactga ccccacacac ccactctttg
      181 ggcgtcgttt tcagattcta tccctcagta ctacgcgcca ctctcaaaga catgtctttg
      241 tggcctatcg cgagaagatg gtgttgcgca ttccccttgc cgcaaccaat cttgcaccac
      301 cccctgctct tctgcgtacc aaattaacct cgcaagctgt ggaggagttc atttcattag
      361 cccaacaatg cgaggtctta tgccggcccg accacaagac gtctggggac gcttgccacc
      421 agcactccaa cagcaactca tcgaggacct cgccacggtc ctccaggagg tgatttatgc
      481 ccacttcaga actggtcacc acccagcatc tcacgcgcaa ggcgatgatc tacattcgcc
      541 agtctacacc gcatcaagtc ctaaccaatc aggagagcct gagcttacag tacgcgctca
      601 aacaacgcgc cctcagcctc ggttggtttg aagcagacat tgaaatcatt gacaccgatc
      661 tcgggctgac gggcgccgcc gcgcaccatc gcgagggctt caaagaactc ctcaccaaag
      721 tcactctggg acaggtcggg atcatcctct cctctgaagt gacgcgcttg tcgcgcaact
      781 gctcggactg gtatccactg ctcgatatct gcggcttcaa aggttgcctg atcgccgatc
      841 gcgatggcat ctatgatcct gccactccca atggacactt gttactcggc ctcaaaggca
      901 ctctctcgga gatggagctc tatacgatcc gggcgcgcat gcacgcggga ctactcaata
      961 aagctcaacg tggtgatctc gccttacagc ttcccgtggg ccttatgcgt gatgaattag
     1021 gacgcgtgca gaaacatccc tcgcgtgaag tgcagcaacg tatcgaactt gtcttccaga
     1081 cttttctcca acgccgcacc caagccaagg tgctgcagta cttcaatcag cagcacctcc
     1141 agttaccgcg ccgcgaccgc tttggcgata tgctctggaa gcccccgacc gtcagtgcca
     1201 tcatctccat cctaaaaaac cccgcttatg ccggcgcctt cgtctacggc aagacccgat
     1261 gtctgcgcca cggctcagcc ccacagcacg ctgacatcaa gcgcctaccc gtggaagaat
     1321 ggaaaattcg cgtcaatgat aagtatcctg cctatgtgtc ctgggaaact tttgagaaga
     1381 tccagctcat gctgtatgac aattacgccg agtatgatcg caacaagacg cggggtattc
     1441 ccagggccgg acaagcactc ttacacgggt tgctttattg cggtgagtgt ggccataaga
     1501 tgatggtcca gtacaagcac ggcactgact cactgtgcaa tcatctgcgc cagcaatacg
     1561 gtgttccggt gtgtcaaaat attcccggtg gccccgtcga ccaagccgtg atcaaggcct
     1621 tctttgaagc gctctcaccg atcgagctcg atgtttatgc acgcgctttg gcagcgcaca
     1681 agcagagtgc tgatcaagct gaccaagcac gccaacaaca gatcgagcga ctgcgttacc
     1741 aggcggcact cgctcagcgc cagttcaacc gcgtcgaccc tgacaatcga ctcgtggccg
     1801 cagaattgga agcccgctgg gaagcggcct tgcg
//
LOCUS       DASQSL010001816         1133 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_52271, whole genome shotgun sequence.
ACCESSION   DASQSL010001816 DASQSL010000000
VERSION     DASQSL010001816.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52271"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..957)
                     /locus_tag="VE844_18320"
     CDS             complement(<1..957)
                     /locus_tag="VE844_18320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03235.1"
                     /translation="MAHLTPRESAMLFEEIGGMTPSASTLDRLPKVLSSRFEVHRDAW
                     ETTLRSRETVPEEAAILAVSLDGVMAPMAKTELETDAPSESEATECGAGASEETSNQR
                     HYREASCGTVSLYDAAGHRLSTIRYGRMPESKKATLCAQLQAECQSIMALRPDLQVVK
                     WADGAEANWRFLDHLDLGLREVQAAEVESVCITDFYHAAEQLHQACDLIWGAGSVETK
                     VEFARLRTLLEEDEQGVDKVIRRLRYRASQLKGKNRDELEKELAYFRNQRHRMRYALY
                     RQAKFPIGSGIVEAACKTLVSSRLKRSGMRWTIAGGQAILTLR"
     gene            949..>1133
                     /locus_tag="VE844_18325"
     CDS             949..>1133
                     /locus_tag="VE844_18325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03236.1"
                     /translation="MSHGKGPLTSRPRRPQALHYATLKLKRTDAFAAATRGTIEVTQH
                     RDGTSRTHIGLGRFDCRA"
BASE COUNT          230 a          360 c          302 g          241 t
ORIGIN      
        1 acgaagcgtc aaaatcgctt gaccgccggc tatggtccac cgcatccctg aacgtttgag
       61 acgactcgac accaacgttt tacatgcggc ttctactatt ccagagccga tagggaactt
      121 cgcctgacga tatagcgcat acctcatgcg atggcgctgg tttcgaaagt aggccagttc
      181 tttttccaac tcgtcacggt ttttcccctt gagttgactc gcccgatagc gtaagcgacg
      241 gatcaccttg tccacgcctt gctcatcttc ttccaaaagc gttcgcaaac gggcaaactc
      301 caccttcgtc tcgacactgc cagcccccca aatcagatcg caggcctgat gcaactgctc
      361 ggcggcgtgg taaaaatccg tgatgcacac cgattccacc tcggccgctt ggacctccct
      421 tagccccagg tcgagatggt cgagaaagcg ccaattcgcc tcggctccat cggcccactt
      481 gacgacctgg aggtcggggc gaagagccat gatgctttgg cattccgctt ggagttgcgc
      541 acataaggtc gccttcttag actccggcat gcgcccatag cgaatggtcg agaggcggtg
      601 acctgccgcg tcataaagac tcacggtgcc acagctcgcc tcgcggtagt gtcgttggtt
      661 cgaggtctct tccgacgccc ccgcaccaca ctcggtagct tcggactcgc ttggcgcgtc
      721 cgtttcgagc tcggtcttgg ccatcggcgc catgacgcca tcgagagaca cggccaagat
      781 cgcagcctct tcgggcaccg tttcacggct ccgcaaggtc gtctcccaag cgtctcgatg
      841 cacttcaaag cgagacgaca acactttggg caagcgatcg agtgtactgg ccgatggcgt
      901 catgccaccg atttcctcaa ataacatcgc actttcgcga ggtgtcagat gagccatggc
      961 aaaggcccct tgacgagccg cccgaggcgt ccacaggcct tgcactatgc cactttgaag
     1021 ctcaagcgga cagatgcttt tgctgccgcg acccgtggga cgatagaggt gacgcaacac
     1081 cgtgatggca ccagccgcac tcatataggt ctgggtcgat tcgactgtcg ggc
//
LOCUS       DASQSL010001817         1036 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_37049, whole genome shotgun sequence.
ACCESSION   DASQSL010001817 DASQSL010000000
VERSION     DASQSL010001817.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37049"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..955
                     /locus_tag="VE844_18330"
     CDS             <1..955
                     /locus_tag="VE844_18330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03237.1"
                     /translation="LAKVMRSFGRSCRGQGQVFVKLVRQTEQQLLEVGQDIMTLGQQA
                     QTYLEHSTTLSETQHDRLSKELTTALCHHEQIRKQSKHLTQGKKLRHFKVVNAYDPTI
                     APIIKGKSNCPAQFGRKPGIISEPATGYIFANRTPKGNPSDATYVLPLIDKVEQAIER
                     VQQGPKRAIHSLAGDLGVNDPVVRQALHERHILSVGIPKTVEPINPHPSAQEILDLLN
                     EADLNRKRTPLQVQLACASGYSRPVVESHIATLLSRGAGTVHYKGLEGAVVQQGMTVM
                     SYNGAVLVRIRQQKMTQRAQKFRRLLGLKSPKISKINPQKN"
BASE COUNT          267 a          310 c          256 g          203 t
ORIGIN      
        1 cctcgccaaa gttatgcgca gcttcggccg tagctgtcgg ggtcaaggtc aagtcttcgt
       61 caaactggtt cgccaaaccg aacaacagct ccttgaggtc ggacaagaca tcatgacctt
      121 gggccagcag gcccaaacat acctggaaca ctcgacgacg ttgagtgaga cccaacatga
      181 tcggcttagc aaggaactca ccacggcgct gtgtcatcat gagcaaatcc gtaagcaatc
      241 caaacacctc acccaaggca agaaactacg tcacttcaaa gtggtcaatg cctacgatcc
      301 caccattgcc ccgattatca aaggcaagag caattgtccg gctcagttcg gccgcaagcc
      361 cggcatcatc tcagagccgg ccaccggcta tatctttgcc aaccgcacgc caaagggcaa
      421 tccgagtgac gcgacctatg tcttgccttt gatcgacaaa gtcgagcagg ccatcgaacg
      481 ggtccaacag ggacccaaga gggccattca ttcgcttgcc ggtgacctgg gcgtcaacga
      541 tcccgttgtg cgtcaagctc tccatgagcg tcacattctc agtgttggca ttccgaaaac
      601 ggtggagccc atcaatcccc atccgagtgc ccaggagatt ctcgacctcc tcaatgaggc
      661 agatttaaat cgcaagcgaa cccctctcca agtccagctc gcctgtgcca gtggctatag
      721 tcgtccggtg gtcgaaagcc atatcgccac cttgctttca cgcggagcgg gcaccgtgca
      781 ctacaaaggt cttgagggcg ccgtggtgca acagggcatg acggtgatga gctataacgg
      841 tgccgtgttg gtccgaatcc gccaacagaa gatgacccaa agggcgcaaa agttccgccg
      901 attactcggt ttaaagtccc ctaagatcag taaaatcaat ccgcaaaaaa actaatcgtg
      961 actatgtaac accgggtcag aaaaaccggt tctatgactg tgctcgacgg ccacccgtcg
     1021 taacatgcct ctgatg
//
LOCUS       DASQSL010001818         1485 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_136991, whole genome shotgun sequence.
ACCESSION   DASQSL010001818 DASQSL010000000
VERSION     DASQSL010001818.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1485
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136991"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1435)
                     /locus_tag="VE844_18335"
     CDS             complement(<1..1435)
                     /locus_tag="VE844_18335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03238.1"
                     /translation="MARTDKQQATTEAQLRVAEIRQSVAERQAELAQKKAELAKEKVE
                     VAGVAAEIAQRRLGLTTRRMEVERKTLTAAEILSSYEVAKGEAARAVKTAQSAQANAE
                     LARRELEAFKREAELAQLKVQAEKSQPGYQTGDALARDTVAALEEGARVATERGQVAE
                     EWASMLQERARLAAERAHISADLEQLLGQHRATYQLWKREPSKVTWNALEEFFTDLVV
                     LRSVVILGVSTLPEQIGALLDSLLHPSRYWRLLKHCLGAALGFMLAAFAALLVRRRLQ
                     PVIDRQAQWFLPQPLKKLLRAAIRLLQAVVLPAFLLLAGMLIFQFVTLGKALFGAIVV
                     ALAGMTVYRLLASAVQELFIPWDPPQRLINCREGIAAYLYRHLHRIILYISIFLTLIY
                     ILEAINYHEGLIALLRLICDVGLLVLFILLAYNKEAIVSLLPSAENRLEKSIYVTVTR
                     VYPLLVLFLICIVALANLGYVNLARFLA"
BASE COUNT          310 a          450 c          424 g          301 t
ORIGIN      
        1 tcgccagaaa gcgggcgagg ttcacgtagc ctaaatttgc gagcgccaca atgcagatga
       61 gaaacagcac tagcaacggg tatacgcggg tcaccgtcac atagatcgat ttttcgagcc
      121 ggttttccgc gctgggcaag aggctaacga tggcctcctt gttataggcc aggaggatga
      181 acagcaccag gagtcctaca tcgcagatga ggcgtagcag cgcaatcagc ccttcatggt
      241 agttgatcgc ctcgaggatg tagataagag tcaaaaaaat gctgatatag aggataatgc
      301 gatgcagatg acggtagagg taggcggcga taccctcccg gcagttaatg agcctctggg
      361 ggggatccca cggtatgaag agttcctgca ccgcactcgc cagcaaacgg taaaccgtca
      421 tgccagccag ggcgacgacg atcgcaccaa acagtgcttt ccccagagtg acaaactgaa
      481 agatcaacat gccagcgagc agcaagaagg ccggcaatac gacggcctgt aataatcgaa
      541 tggcggcgcg caggagcttt ttcaggggct gggggaggaa ccactgcgct tgccggtcga
      601 tgaccggttg caatcggcga cggacgagaa gggcggcgaa ggcggcgagc ataaaaccga
      661 gggccgctcc caggcaatgc ttaagcagcc gccaatagcg tgaagggtga agcagagaat
      721 ccagcagagc cccgatctgc tccggcaacg tcgacacacc aaggatcact acactacgca
      781 ggaccaccag gtcggtaaag aattcttcga gggcgttcca ggtgaccttc gacggctccc
      841 gcttccaaag ttgataggtg gcgcggtgct gacccaagag ttgctcaagg tcggcgctaa
      901 tgtgcgcccg ctcggcagca agccgggcac gctcctggag catgctcgcc cactcttcag
      961 ccacttggcc cctttccgtc gcaacccgtg caccctcttc cagtgcggcc actgtgtcgc
     1021 gtgccagggc atcacccgtt tggtaaccgg gttggctttt ttccgcctga actttgagct
     1081 gtgcgagctc ggcctccctc ttgaacgctt ccagctctcg cctggccaat tcggcattcg
     1141 cctgggccga ctgcgcggtt ttaaccgccc gagccgcctc acctttggcg acttcataac
     1201 tgctgagaat ttcagccgcc gtcagcgtct tgcgctcgac ctccatcctc ctggtggtca
     1261 accccaagcg cctctgggcg atctcggcgg ccaccccagc cacttcaact ttctccttgg
     1321 caagctctgc ctttttctgg gcgagttccg cctgccgttc agcgacgctt tgcctgatct
     1381 ctgccacgcg caactgagct tcagtggtag cttgttgctt gtctgtccgg gccaattgca
     1441 gcgcttgctg gctttttcac gctcttcctg gcccctgacc tggtc
//
LOCUS       DASQSL010001819         1266 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_52327, whole genome shotgun sequence.
ACCESSION   DASQSL010001819 DASQSL010000000
VERSION     DASQSL010001819.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1266
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52327"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            60..314
                     /locus_tag="VE844_18340"
                     /pseudo
     CDS             60..314
                     /locus_tag="VE844_18340"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          231 a          391 c          363 g          281 t
ORIGIN      
        1 gtgattatgc catgcgtggg ggaggatgct caacaacttg acaatgcctg gaggcggtga
       61 tgacgatcga gggcgcgacc gactcggccg tgttccgcgc ctacctctgt gaggtgttgt
      121 gcccgacgct ccgtgtgggc gacatcgtca tcgcagacaa cctctcggca cacaaggccg
      181 ccggcgtgca ggaggcgatc gcggccaccg gggcgcggct gctctacctg ccgccgtact
      241 cgcccgatct gaacccgatc gagcgctgct gggcaaagat caagacgtgc ttgcgggccg
      301 ccaaggcccg cacacgcgaa gcgcttgacg tggccgtcgc gtatgcgctg gcgaccgtta
      361 cagagtcgga tgcccgggcg tggttcgccc acagcggcta cgttctacac tgacatgaaa
      421 actgctctaa gcatggagta gaatcagcac gccatacatg gcttgcacca tgcggtcttg
      481 ctgaagccct ccccaaaccg gacaagccac tttcatggca tccggctatc ccccgatccc
      541 acccatatgg gtgttgtcag atgtcatgag aggcgttatc ggcggcctag tgccacccgg
      601 ttctcactac cctctctctg ccccggtgtg agcattggtc atcagccgac ctatccttac
      661 ggaagctcac tcccggttcc ggcgttgcgc gtgtcgcaag ttttgtgctg ccgtaggtgc
      721 cctttggacc ccttgacctg gcgtaccagg cttggaacta gcctcgtagg atgtaaggcc
      781 cttgaggctc ccgctctccc atatattgaa ttctggttgc ggggcaggac tttcttatct
      841 tctaaggtcc tgcttcattc cactccccct aagccatctt ctcagggagc cgcttgatta
      901 tagggtgtct cgggttcgac aatacagtct caccgtagca gcgtccgtga cgtgggcatc
      961 ttggcagtat ggctctgccg cacccctcgc ccgtgtcccc accgagcttg atctcatgcc
     1021 cgctatcagg ggctatcctg tcggcatcgg gtgggtaagg acagagctgc cttaccagct
     1081 ctgacacgct tcgcgtgcat tgcgacacgg cctagcgccg cgcccagata agtttaagcg
     1141 gctgctcctg cggtttgagc gcattcagca gcggcactat gggatgaagt tgctggcata
     1201 caccttgatc aatgtgagag agttctgctg tgcctaaaac tcgcaaccag ttcaatggaa
     1261 gattag
//
LOCUS       DASQSL010001820         2806 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_118138, whole genome shotgun sequence.
ACCESSION   DASQSL010001820 DASQSL010000000
VERSION     DASQSL010001820.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2806
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118138"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..128
                     /locus_tag="VE844_18345"
                     /pseudo
     CDS             1..128
                     /locus_tag="VE844_18345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611171.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            981..2240
                     /locus_tag="VE844_18350"
     CDS             981..2240
                     /locus_tag="VE844_18350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03239.1"
                     /translation="MNTNEQALRREAIRRRLSGEQRRDICQDLGRSTRWFDKWWSEFR
                     SDPHTDLADHSRAPLTVWSIATPALEQLVIELRQAFESANHGLIGARAIWGKLIELNV
                     KPLPSEATIQRILAHYELTHPVGAATKTAYYPWLSVWDVNAVQATDIITKHIRGGVEI
                     QNFHTLDLFTQAACLTQSLDKTSATTCAHLLKAWEKLGLPYLHQFDNEGSFCGGHTHQ
                     RVIGRVVRLCLFCGVEAFFTPIYEAKRNHQIEPFHGLWCQAFWTRQIFTDLAHVRAQI
                     PVFTRWYHHHYRPPCLQGKTPAQMRYGLRVPKLTAELRRLIPDFQAGRLPLTAGRFHF
                     MRKVDTSGHIEFLNERWLVGSKWIGEYVRATINTAKQTLILSHKASDQADWRVIKNRR
                     FRVKEPVHDLLPQFRRNRARCRDCLPG"
     gene            complement(2284..>2806)
                     /locus_tag="VE844_18355"
     CDS             complement(2284..>2806)
                     /locus_tag="VE844_18355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HZC03240.1"
                     /translation="DHADFLARADILGALGQMVMISSFAYYYRVTTFLRRYTSRPIAF
                     AMGVPALTELFDEKYYADLSAGILEAMAGLFKRDALVFVYPSLDPATGQLITAETFMV
                     GQHLRHLHAYLLENHFLQSIRAMNKNYLHISPRDVIAKIQSGDPTWETMVPTMVAERI
                     KQYQLFGIMTSNT"
BASE COUNT          614 a          773 c          764 g          655 t
ORIGIN      
        1 tggattgtgg aagtgaccca ttcatggctg aacaattgtt agtcagatgg gagaagaaaa
       61 cgtctaacta cttgtcaatg ctttactttg cgtgcgctat catctgttgg agaaagtgcg
      121 aggtttagag ataggttctt aataagctca tgtgctgtcc cgcgtcagtc agggttttcc
      181 caactatcta ggatattgcg tgacagggag ttcattttcc gtaggttgag acccgattca
      241 tttctattca ccatgtcatt cctttgccaa gccctgcatc ttggtggcct agttcgcacc
      301 tcacaggtac attttaagag cagctttttc acctctactt tgcatccagt agacgctacg
      361 ctctaaaggc atagtgccaa tccagcattg gcccaagtgg ctcccacatt ccatctacac
      421 gcctcgtggc gcacgcttcg tttgaactca ccatgctatc tctcagccaa acctggcgtc
      481 ttggcggctt gcatcgcgcc tcaccagtat cttttagggc cagctttttc acccccgctt
      541 cgcaatctag cgggcgctac ggcccaaaga ctcactgcct acctgtatag gctgtggagt
      601 tttccactca ttccatctac acgcctcgtg gcgcacctga ccctccgatg tccgcgccag
      661 tcgacgcgag ttcgcgaggg tcggtcaggt tgccatgcgc gcttcgtgcc gcagtcgggg
      721 gttcaaggtg gagccacagg gtcatgttag gtacggcgtc ggagcgccaa tcccatcgcg
      781 accttggggg aatacctctc cgatatccaa aggtactttc atccgcgggg gtgtcaagag
      841 tctatgacat aactcccaat agtcataaca tcgtgcgcgt tagagcaatc acaacatcgt
      901 gcgcactcta acggcctgga gcaatcacaa catcgtgcgc gttttgtgtg accttcttcc
      961 ctcaaggagg aagcgtcact atgaacacaa acgaacaagc actgcgacga gaagcgattc
     1021 gtcgtcgcct gagcggagag caacgaagag atatatgcca ggatttgggg cggtctaccc
     1081 ggtggttcga caaatggtgg tcggaattca gaagcgatcc gcataccgac cttgccgatc
     1141 actcgcgcgc gcctttgacg gtctggtcga ttgccacgcc ggcactggag caattggtga
     1201 tcgagttgcg gcaagcgttc gagtcggcca atcatggttt gattggcgca cgcgcgatat
     1261 ggggcaagct gatcgagctg aacgtcaaac cgttgccgag cgaagcgaca attcaacgca
     1321 tcctggcgca ctacgaactg acccatcccg tgggggcggc gaccaaaacg gcttactacc
     1381 cttggttgtc ggtgtgggat gtcaatgcgg tgcaggctac cgacatcatt accaagcata
     1441 tccgcggtgg tgtggaaatt cagaacttcc acacgctcga cctattcacg caggcggctt
     1501 gtctgaccca gtccctcgac aagaccagtg caacaacctg tgctcatctg ctcaaggcct
     1561 gggagaagct cgggctgccg taccttcatc agttcgacaa cgaagggtcg ttttgcggcg
     1621 gccataccca ccagcgcgtc atcggtcggg tagtgcgact gtgcctgttt tgcggcgtgg
     1681 aagcgttctt cactcccatt tacgaagcca aacgtaacca tcagatcgag ccgtttcatg
     1741 gactgtggtg tcaggcgttc tggacccgcc agatcttcac cgatctggcg cacgttcgtg
     1801 cccaaatacc ggtctttacg cggtggtatc atcaccatta ccgacctccg tgtttgcaag
     1861 gcaaaacgcc cgcacagatg cgctatggcc tcagggtccc gaaattgact gccgagttgc
     1921 gtcgactgat cccggacttc caggccgggc gtttgccact caccgctgga cgcttccact
     1981 tcatgcgcaa ggtcgacacc tcgggtcata tcgaatttct caacgagcga tggctggttg
     2041 gctcgaagtg gataggcgag tatgtgcgtg ccacgatcaa cacggccaaa cagacactta
     2101 tcctctcgca caaggcttcc gaccaggccg attggcgggt gatcaaaaat cgtcgctttc
     2161 gggtcaagga accagtccat gatctgttac cacaatttag gcgaaatcgc gcacgatgtc
     2221 gtgactgctt gcccggttag aattggcata aaaaaacgcg cacgatgttg tgattattgg
     2281 gacttaggtg tttgatgtca ttatcccaaa gagttggtac tgcttgatgc gctcggccac
     2341 cattgttgga accatcgtct cccaggtagg gtctccgctc tggattttgg cgattacgtc
     2401 gcgcggagag atgtgcaggt agtttttatt catggcacgg atcgattgca ggaagtggtt
     2461 ctccagcaga taggcgtgca agtggcgcag atgctgacca accatgaaag tctcggcagt
     2521 gatgagctga ccagtcgctg ggtccagcga tgggtacacg aacaccaagg cgtcgcgctt
     2581 gaatagcccc gccattgcct cgaggatgcc agcgctgaga tctgcgtagt atttttcgtc
     2641 gaacaactcg gtcagcgcgg gcacgcccat ggcgaatgcg atgggcctgg acgtgtaacg
     2701 gcgtaaaaac gtcgtgacgc ggtagtaata cgcgaagctg gaaatcataa ccatctggcc
     2761 caacgcacct aggatgtcgg cgcgtgccag gaaatcagca tggtca
//
LOCUS       DASQSL010001821         1081 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_52361, whole genome shotgun sequence.
ACCESSION   DASQSL010001821 DASQSL010000000
VERSION     DASQSL010001821.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52361"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            204..>1081
                     /locus_tag="VE844_18360"
     CDS             204..>1081
                     /locus_tag="VE844_18360"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016717 - oxidoreductase activity, acting
                     on paired donors, with oxidation of a pair of donors
                     resulting in the reduction of molecular oxygen to two
                     molecules of water [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA desaturase"
                     /protein_id="HZC03241.1"
                     /translation="MKRLIKQNGLLDRQPAYYAGKITLTLGLLAVSLTLLLILDNPWL
                     QLLNAAYLAFVFVQISLLAHDCGHRQFSFHASRKNDWATLIFGNLLLGVSRQWWIDKH
                     NEHHGHPNQIDADPDVDIPLLAFEEEQALDKRGLARFVVQYQAYLIFPLSFLQALSMH
                     IKSVRFLIEKKAKSTLAEALLLGAHFALYFALLFSVLEPLPAMLFITVHRGLFGMYMV
                     SIFAPNHKAMPVLDRDSQLDFLRRQVLTSRNVIAHPITDFWYGGLNYQIEHHLFPRMP
                     RNKLREAQPIVKDFCR"
BASE COUNT          228 a          333 c          278 g          242 t
ORIGIN      
        1 ccggggtttc gaagtcctcg acggtggatt cgtctgtgag aagtggcggg cgagacagtc
       61 aaagctgatc agtacctgaa ttggaaggac catacttcat gaaccctgaa aagttatcct
      121 catccgatga gccggccgag ggcttagctt ctactcttgt caaagaatcc gtacctcgct
      181 cacgaagcaa tcaatacgct gagttgaagc gtctcatcaa gcagaacggg ctgctggacc
      241 gccagcctgc ctattacgcg ggcaagatca ccctcaccct cggcctgctg gcggtgagcc
      301 tgaccttact gctgatcctc gacaacccct ggctccagct actaaacgcc gcctatctgg
      361 ccttcgtctt tgtccagatc agccttctcg cccacgactg tgggcatagg cagttttcct
      421 tccacgcctc acggaagaat gactgggcta ctctcatctt cggcaacctg ttgctcgggg
      481 tgagccgcca gtggtggatc gacaagcata acgagcatca tggtcatccg aaccagatag
      541 acgccgatcc cgacgtggat attccgctgc tcgccttcga agaagagcag gctctcgaca
      601 agcgagggct tgcccggttc gtcgtgcaat accaagctta cttgatattt ccgctatcgt
      661 ttctgcaagc gctcagcatg catatcaaga gcgtccgctt tctcatcgag aagaaagcaa
      721 agagtacgtt ggccgaagca ctcctcctgg gagcgcactt cgcgctgtac ttcgccttgc
      781 tgttctccgt gctagaacct ttgccggcga tgctgttcat caccgtccat cgcgggctct
      841 tcggcatgta catggtctcg atcttcgcgc ccaaccacaa agccatgccc gttctggaca
      901 gggacagtca gctggacttc ctgcgccgac aggtgctgac cagccggaac gtgatcgccc
      961 accctatcac cgacttttgg tatggcggcc tcaactacca gattgagcat cacctttttc
     1021 cgcgcatgcc ccggaacaag ctgcgggaag cgcagccgat cgtcaaagac ttctgtcggg
     1081 a
//
LOCUS       DASQSL010001822         1506 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_200118, whole genome shotgun sequence.
ACCESSION   DASQSL010001822 DASQSL010000000
VERSION     DASQSL010001822.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200118"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1486
                     /locus_tag="VE844_18365"
     CDS             <1..1486
                     /locus_tag="VE844_18365"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="histidine kinase dimerization/phosphoacceptor
                     domain -containing protein"
                     /protein_id="HZC03242.1"
                     /translation="LNEQLLTDIIVRRRAEAALAAEARFLRAQTEVAKVALSSLRPEA
                     LAQPLIETIGRAQGYAYGALWRVVEDKNAATLVACFGEDMAPFVGTLQELSDPSSFAA
                     MIIRTGQPGFSNHVRERVYGLNPLTRRLRAQALLGLPLIGRTGQVVGAMVFADNEYPA
                     RFTERDLTQGSVLANQVAQTLENSELFSQVNRLQEQYRVVTEALNDAVFTLDADARFA
                     FGNAAGERLTGYRLEELLGRSFMDLVAPEDLPELVDRFRRAIAGEAIPPHVQAEMIRK
                     DGARVPIELSMANLVLDGRVVGRVGVARDITERRRAEAQIKASLQEKEVLLKEVHHRV
                     KNNLQIISSLLNLQSKYINNPHAPQMFIDSQNRVKSMAVIHEILFQSRDIAKIDFAEY
                     IKTISVQLFRSYGTYSKKIALAINVKDIMLDVNTAIPCGLIVTELVSNSFKYAFIDGR
                     DRKISIDFEKCRLDMLKLTVSDNGVGFQKKFLLKKWNLWGSNWL"
BASE COUNT          349 a          402 c          423 g          332 t
ORIGIN      
        1 tctgaatgag caactcctca cggatatcat cgtgcgccgg agggctgaag cggcactcgc
       61 tgcggaggcg cgcttcctgc gggctcaaac cgaagtggcc aaagtggcgt tgtcgagctt
      121 acgtcctgag gcactcgcac aacccttgat cgagaccatc ggccgtgctc aaggctatgc
      181 atacggggcc ttatggcgcg tggtggagga taaaaatgcc gccaccctcg tggcctgttt
      241 tggggaagac atggccccgt tcgtcggcac cctacaagaa ttgagcgatc ccagctcgtt
      301 tgccgccatg atcattcgca ctggccaacc aggcttcagt aaccatgtgc gagagagggt
      361 atacggcctg aacccgctca cccgccgtct tcgagcccag gcgctcttgg gtctgccgct
      421 gatcggtcgc accgggcagg tggtgggagc catggtgttc gccgacaatg aataccccgc
      481 acggtttacc gagcgcgacc tcacccaggg cagcgtgctg gcgaaccagg tggctcagac
      541 gcttgagaac agcgagctct tcagccaagt caaccgcctc caagaacagt atcgcgtggt
      601 cactgaggcg ctcaacgatg cggtattcac cttagacgcc gacgcccggt ttgccttcgg
      661 caacgcggcc ggggagcggc tcaccggcta tcggctcgaa gagctgctcg gacgctcgtt
      721 catggatctc gtggccccag aggatctgcc ggaactcgtc gaccgttttc ggcgagccat
      781 tgccggggag gcgatcccac cgcatgtgca ggccgagatg atccgtaaag acggcgcgcg
      841 cgtgccgatc gagttgtcga tggcgaatct tgtcctggat gggcgcgtcg tcggacgcgt
      901 tggggtggcg cgagacatta ccgaacgccg gcgtgcggag gcgcaaatca aggcttcgct
      961 tcaagagaag gaggtgctgc tgaaagaggt acaccatcgg gtcaagaaca atttgcaaat
     1021 catctcgagc ctgctcaact tacaatcgaa gtatatcaat aaccctcatg cacctcaaat
     1081 gttcatcgat agccaaaatc gtgtgaaatc gatggccgtc atccacgaga tcctttttca
     1141 atcgagggat attgccaaaa ttgactttgc agaatacatc aagaccattt ccgttcagct
     1201 ctttcgttcg tacggcacct attcaaagaa gatcgctctc gcaatcaacg tgaaagatat
     1261 catgttagac gtcaatacgg cgataccatg tgggctgatt gtcactgagc ttgtgtcaaa
     1321 ttcatttaag tacgcattta tcgatggtcg tgacaggaaa atctctatcg acttcgaaaa
     1381 atgtcgttta gatatgctaa aactaactgt tagcgataac ggggtagggt ttcaaaaaaa
     1441 atttctattg aagaaatgga atctttgggg ctcaaattgg ttgtagcgtt ggtgaagcaa
     1501 ttatct
//
LOCUS       DASQSL010001823         1983 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_172493, whole genome shotgun sequence.
ACCESSION   DASQSL010001823 DASQSL010000000
VERSION     DASQSL010001823.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1983
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172493"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..263)
                     /locus_tag="VE844_18370"
     CDS             complement(<1..263)
                     /locus_tag="VE844_18370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03243.1"
                     /translation="MDVVFWLWLSAVVSAEESCTQPEVAFTRALITDGKDHLLEELRC
                     GVVPDRDELPVLLALSDNGGADDVQVHQGVPGRRPHHATHFGRP"
     gene            complement(893..1798)
                     /locus_tag="VE844_18375"
     CDS             complement(893..1798)
                     /locus_tag="VE844_18375"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC03244.1"
                     /translation="MLENRAVTPGVSLGATVPPDDIDEVVHASIDIPKERPLRYHRTT
                     GLTLEQTQELVRRIQGALTEPWDKGTGRPKSCDLYHAVELACMYVRQNAPQEFLGDLR
                     NVSQSTVSRIVTILVPMVKENLKEFVPTAAEALELVSGRVCLVDGTITPCWSYDDHKE
                     LWSRKHGTTGFNAQLVSLLDGEAVYISDPLPGKTHDATAFAGTPVAEIVRHSGGGIGD
                     KGYQGCDGVVTPRKTPPGGELSIGDKKNNAVISALRAPIERLIALFKSWRIFHTDYRR
                     PHRTYSDAYDAGRGLFFFSITWGFE"
BASE COUNT          384 a          622 c          559 g          418 t
ORIGIN      
        1 ggccggccga agtgggtcgc gtgatgcggg cgccggccag gaacgccttg gtggacttgg
       61 acgtcatctg cgcccccgtt gtccgacaga gccagcagca cgggcagttc gtcacggtcg
      121 ggcacgacgc cgcaacgcag ctcctccagc aggtggtcct tgccgtcggt gatcagcgcg
      181 cgggtgaacg ctacctccgg ctgggtgcag gactcctcgg cggagaccac tgcggacagc
      241 cacagccaga agaccacgtc catcaccgcg accgcgcacc gcttccccgc tggaaggtgc
      301 gtgaagtcgt aaatccagat gaccccgggg accaactccg cccagtccgg ccacggcctg
      361 gccccatttc cgacatgcac cccgcgccct tcccggagaa caggcgctga tcaatcagtt
      421 tccttcggat gtccggttcc cgcgtaggtg atccataccg tgcgagtggc atcgtcgatg
      481 agataccaga tccgtccacc accggtcacc tcgtactgcc actgttccaa gacccggccc
      541 cggtaggagc gagtcgcaaa agcgtgtttg agttggtggc gttcactcgg gggtttgggc
      601 cgcggatcgg caacgatcgc ttcccaggct cgacggctgt tacctgcggc ctgagcgcac
      661 agatgctccc cagccgggga ttacctggct gtctgcgaac cggatgttgt aacgcccgct
      721 ctgggcggtg gcgctacccg atctccccgt ttcggactca cggcaggctt ccccacgctt
      781 ccggacgcgg aaccgggccg gcttcattgc cttgtcccac acgggagaag gccggttggc
      841 cgtgttcgtg ccctactccc gtcacgaatc cgtaacatcg atccttagaa cgttattcaa
      901 aaccccatgt aattgagaag aagaataatc cgcggccagc atcatatgcg tcgctatagg
      961 ttcggtgcgg acggcgatag tcagtatgaa agatccgcca ggatttgaaa agcgcaatga
     1021 gtctttcaat aggtgcccgc aacgccgaga tgactgcatt gttcttcttg tcacctatgc
     1081 tgagttcgcc gccgggtggt gtcttgcgtg gtgtaacgac accatcacat ccttggtagc
     1141 ctttgtcgcc gatcccacca ccggaatgtc gaacaatctc agcaaccggt gtgccggcga
     1201 acgcggtagc gtcatgggtc tttccgggga gggggtcgga aatatagaca gcttctccgt
     1261 caagcaagct gactagttgc gcgttgaatc cggtcgtgcc gtgcttgcgg ctccacagct
     1321 ccttgtgatc atcataggac cagcaggggg tgatggtgcc atctacgagg cacacccgac
     1381 cgctgaccag ctcgagcgcc tccgccgccg tcggtacgaa ctctttcaag ttctccttca
     1441 ccatcggcac caggattgtc acaatcctcg acactgtaga ttgtgaaacg ttcctcaggt
     1501 cgcccaggaa ctcctgggga gcgttctgtc gtacgtacat gcaggcaagc tccaccgcat
     1561 ggtataaatc gcacgatttt ggtcgtcctg tacccttgtc ccacggctca gttaatgcac
     1621 cctggatacg acggacaagc tcctgtgtct gctcgagcgt taaacctgta gtacgatggt
     1681 atcgcaacgg tctttccttg gggatatcga tgctggcgtg gacaacctca tcaatatcat
     1741 cgggagggac cgttgcccca agcgacacgc cgggcgtgac cgccctattt tcgagcaatc
     1801 attcggctat ccccactgtg ccgcacccat cgtgatgcat agacgccgca cgcaaatctc
     1861 catccttctc aattaaatgg ttttgaataa agctcactat tttgggcctg gccacgaccg
     1921 tttctattgc caatataccg gggactgtga cccaggctca gctcacggga gatggtctcc
     1981 cgc
//
LOCUS       DASQSL010001824         1566 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_107367, whole genome shotgun sequence.
ACCESSION   DASQSL010001824 DASQSL010000000
VERSION     DASQSL010001824.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1566
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107367"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(87..299)
                     /locus_tag="VE844_18380"
     CDS             complement(87..299)
                     /locus_tag="VE844_18380"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HZC03245.1"
                     /translation="MVSSVDNLVRPMVISGATRIPFLLVTFGVLGGLAAFGLIGLFLG
                     PVILAVLVAVWREWVQEQTADRPEGS"
     gene            complement(293..1162)
                     /locus_tag="VE844_18385"
     CDS             complement(293..1162)
                     /locus_tag="VE844_18385"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HZC03246.1"
                     /translation="MGDEIAFAWERRILLGVFLGGLLLLSYVTLHQFLVPMVWAGILV
                     YVTWPLYRRLRLLLRGRASIGALVMTLFLFMAFALPLLWLLAELRDELTTAYQAMTSY
                     LHQGPPSPPAFIDRIPWLSEWWQRLMDKLAGDPEAIKGQVLEWVKRFQEELANMVGDV
                     GRNAIKLLFTLFTVFFFYRDGEGFLREVQQVLERLLGQRVNVYLLAIGDTTKAVVYGL
                     VLAALVQGMFTGIGYWAVGLQAPVLLGILTVLVALIPFGAPLVWVPLGVWLLFTGQTW
                     PLGWDSCSGAPSW"
     gene            complement(1376..1566)
                     /locus_tag="VE844_18390"
                     /pseudo
     CDS             complement(1376..1566)
                     /locus_tag="VE844_18390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015006104.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="JAB domain-containing protein"
BASE COUNT          405 a          468 c          406 g          287 t
ORIGIN      
        1 gggtttattc cacagatctc aaataagact atcgtgctcg tacgcgctat ccccgcgcga
       61 cgcaagtctt agctgctctg ccactattat gaaccttcgg gtctatcggc ggtctgctcc
      121 tgcacccact cccgccatac agccacaagg accgcgagga tgaccgggcc caggaaaagc
      181 ccgatgagac cgaaggcggc gagaccgccc agcaccccaa acgtcacgag cagaaaggga
      241 atgcgggtag caccgctgat caccatggga cgaaccaggt tatcgaccga gcttaccacg
      301 agggtgcccc agagcaggag tcccaaccca gaggccaggt ttggcctgtg aacagtagcc
      361 agacgccgag aggaacccat accaacgggg cgccaaacgg aatcagcgca accaggacag
      421 tcaaaatacc gagcaatact ggggcctgta ggccgaccgc ccagtagccg ataccggtga
      481 acatgccttg gaccaatgcc gcgagtacca ggccatagac cactgctttc gtggtatcgc
      541 caatcgcaag gagatagacg ttcacccgtt gccccaggag gcgctctaac acctgctgca
      601 cctcgcgaag gaatccttcc ccatcccgat agaagaaaaa gacggtaaat agagtgaaaa
      661 gcagctttat ggcattacgc cccacgtccc caaccatgtt ggctaactcc tcttgaaagc
      721 gtttcaccca ctcaagcact tgccccttga tcgcctcggg atcaccggcg agtttgtcca
      781 tcagtcgctg ccaccattcg ctcaaccatg gaattcggtc aatgaatgcc ggaggtgaag
      841 gcggtccctg gtgcaggtag gaggtcatcg cctggtacgc tgtcgtcagt tcatcccgca
      901 actcggcaag tagccagagt aagggcagtg cgaaggccat gaacaaaaac aaggtcatca
      961 cgagtgcgcc gatgctcgct cgtccgcgca gcagcaaccg caggcggcga tagagcggcc
     1021 aggtgacata gacgaggatc ccggcccaga ccatgggcac cagaaattgg tgcagagtga
     1081 cgtagcttag gaggagcagc ccgcccagaa aaaccccaag gagaatacgg cgctcccaag
     1141 cgaaggcgat ctcgtcaccc atactttata gattaacggg gactggtcaa aaatgccctc
     1201 ttcatcttta cacttcggaa tgcatcatat ggcccgggaa accctattca cttagccagt
     1261 gggcagttcc gtaaccataa aagtgtaaag caactttgac cagtcccaga tttagtaatg
     1321 tgaatggtga aaccagggta tttgtgcagc aggttgctgc acaaatgctt cttccctaaa
     1381 gcaacccgcg ttcggcaaaa gaggccacat cttctgcgcc aaccacgaag tggtctaaca
     1441 cgcgcacatc caccagtgag agcgcatcct ttaatcggct cgttatgttc tcatccgcct
     1501 tgctcggctc tgccacgcca gacgggtgat tattgataca gaatcaccgc agcagcatta
     1561 gcttca
//
LOCUS       DASQSL010001825         1216 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_118162, whole genome shotgun sequence.
ACCESSION   DASQSL010001825 DASQSL010000000
VERSION     DASQSL010001825.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1216
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118162"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(151..>1216)
                     /gene="waaA"
                     /locus_tag="VE844_18395"
     CDS             complement(151..>1216)
                     /gene="waaA"
                     /locus_tag="VE844_18395"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: protein motif:HMM:NF004388.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HZC03247.1"
                     /translation="LRRQYPDLEILLTTTTPTGAERARRQLAGQAFHCYLPYDLPGAI
                     GRFLKRVQPLVVIVMETELWPNLLHLCKRFNIPVILANGRLSRRSMQGYQRLPGLTRT
                     MLADIAAIAAQTRDDADRFIRLGADPARVSITGNLKFDVSLPADIYDRAKLLRRALGE
                     QRPIWIAASTHEGEEAIVLDALDKLLVLEPAVLLLLAPRHPERFDQVFELCQKRGLKI
                     VRRSEKRDCIPKTQVFLIDTLGELSLFYAVSDVAFVGGSLVGTGGHNPLEPASLGVPI
                     LTGPHVFNFQAIFELLREAQAAIMVATAEDLASRVAQFLADAERRQAAGMRGLQVLEA
                     NRGAVDRIMRLVQKYLELSG"
BASE COUNT          280 a          349 c          341 g          246 t
ORIGIN      
        1 gttcttttat tcaagcgtca accatccgcg atggcttcag aactcagcat cgaaccgcgc
       61 accgccctga atcttgaatc acagccgccg ctaaggtcaa gcgggatgaa gtcgagactg
      121 ctttggtgag atcttagaaa ccgtctattc ttagccagac agctctagat acttctgcac
      181 gagcctcatg atccgatcca ccgccccacg gttggcctcg agcacctgca aacctcgcat
      241 tccagcggct tgacgccgct cggcatcggc caaaaactgc gctacccgtg aagccaagtc
      301 ctcggccgta gcgaccatta tcgcagcttg ggcttcacgc aatagctcaa agatcgcctg
      361 gaaattgaac acatggggac ctgttaaaat cggcacgcca aggctcgcgg gttccaaggg
      421 attgtgcccg cctgtgccga ccaggctgcc gcctacaaag gctacatccg atacggcata
      481 gaatagtgac agctctccca gcgtatcgat caggaatacc tgtgtcttag ggatacagtc
      541 gcgtttttca ctacgcctga caatcttcaa gcctcttttt tggcagagtt caaaaacttg
      601 atcaaaacgt tcaggatggc ggggcgccaa caacaagagc acggccggtt ccaggactaa
      661 cagcttgtcc aaggcatcga gcacaatcgc ctcttcgcct tcgtgggtgc tggcagcgat
      721 ccagatcgga cgctgttcac cgagcgcgcg acggagtagc tttgctcggt cgtagatatc
      781 ggcgggcaga ctgacatcga atttgagatt accggtgatg gagacacggg cgggatcggc
      841 cccaagcctt ataaaccgat cggcgtcgtc gcgtgtctga gcggcgatcg cggcgatatc
      901 cgcaagcata gtgcgggtga ggcccggcaa gcgctgataa ccctgcatgg aacgccgtga
      961 aagccgccca ttggcgagga tcacagggat attgaagcgc ttacaaaggt gcaggagatt
     1021 cggccagagc tcggtctcca tgacgatcac tacaagcggt tgcacccttt tgagaaatcg
     1081 cccgatggcg cccggcagat catagggtag gtaacaatgg aaggcttgac cggccagttg
     1141 ccgacgcgcg cgttccgcac ctgtaggcgt ggtcgtggtc agcaggatct cgagatccgg
     1201 atactgtcgc cgtaag
//
LOCUS       DASQSL010001826         1190 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_52392, whole genome shotgun sequence.
ACCESSION   DASQSL010001826 DASQSL010000000
VERSION     DASQSL010001826.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52392"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..774)
                     /locus_tag="VE844_18400"
     CDS             complement(<1..774)
                     /locus_tag="VE844_18400"
                     /inference="COORDINATES: protein motif:HMM:NF013143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HZC03248.1"
                     /translation="MITEFLHSWELFHNTYLAGWCIGLFLSLVGILAVARDQIFLTAA
                     SAQAATFGVALGLWLSGLAADWPGLHSDSFLSGLAMVFAVLAVLFTVRGRQAGGESIE
                     AITGWIFLLSASGSVLLLSHSPHGLEEIHRLLSSSLIGASATEIGIFASLTALTSVVL
                     LRFHRPIVLVTLDPLLAQAIGLKTHRWMASVAIALGLATGLSIRSAGLLYTFGCLVLP
                     ALVAKNLCREIRTMFIMAPCVVLGSGLVGFILANHYDLPP"
     gene            complement(771..>1190)
                     /locus_tag="VE844_18405"
     CDS             complement(771..>1190)
                     /locus_tag="VE844_18405"
                     /inference="COORDINATES: protein motif:HMM:NF024700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZC03249.1"
                     /translation="LGWALDAVDLQGMERCDYWSLSDGQRQRALVARALVRYPSLLIM
                     DEPAGGLDMAVETKLMEYLGRLNQEEGITIVCVSHDLETAVRYGTQVGLVSQRGIQTG
                     RPLEVLTPDNLKRVYGLSLDLANGNNRLSAQVLGSIS"
BASE COUNT          291 a          353 c          346 g          200 t
ORIGIN      
        1 gggcggcaga tcataatgat tggccaggat gaacccgact aatccactgc cgaggacaac
       61 gcagggcgcc ataatgaaca tagtccggat ctcgcggcaa aggttttttg ctacgagtgc
      121 cggtagcacc aggcagccaa aggtataaag caggccggcg gagcggatgg agagccccgt
      181 ggcaaggccc agggcgatgg ccacactggc catccagcgg tgcgttttga ggccaatagc
      241 ttgtgccagg agtggatcca gagtaacgag cacgatcggc cggtgaaagc gcagcagcac
      301 caccgaggtg agtgcagtga ggctggcaaa gatcccgatt tcggtggcgc tcgccccgat
      361 gaggcttgaa gaaagcagcc ggtggatctc ttcaagccca tgcggactat gcgagagcag
      421 cagcaccgag ccgcttgccg acaagagaaa gatccagccg gtgatggcct cgatgctttc
      481 gccgccagcc tgtctccccc ggactgtgaa cagcacagcg agcacggcga ataccatcgc
      541 caacccagac agaaagctat ccgagtgtag ccctggccag tcggcagcca agccgctcaa
      601 ccacagaccc aatgccacgc caaaggtcgc cgcctgggcg ctggcggcgg tgaggaagat
      661 ctggtcccgc gcgacggcca ggatcccgac cagcgaaaga aaaagcccta tgcaccagcc
      721 ggccagatag gtgttatgaa acaattccca ggaatgcaga aactctgtga tcatgagatg
      781 ctcccaagga cttgagcgga caagcgatta ttgccattgg ccagatccaa agacaatcca
      841 tagacccgtt taaggttatc cggggttagg acctcgagcg ggcggcctgt ttgtataccc
      901 cgctgagata caagtcccac ctgggtgcca taacggaccg cggtctcaag atcatgggag
      961 acacacacga tcgttatccc ttcctcttgg ttcaatcttc cgagatattc catgagcttg
     1021 gtctctacgg ccatatcaag tccaccggct ggttcatcca tgatcagtaa cgaagggtaa
     1081 cgcacgagcg ctcgagcgac cagggcgcgc tggcgctgtc catccgagag cgaccagtaa
     1141 tcgcacctct ccatgccttg cagatccacc gcatcaagcg cccagccgag
//
LOCUS       DASQSL010001827         2498 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_162761, whole genome shotgun sequence.
ACCESSION   DASQSL010001827 DASQSL010000000
VERSION     DASQSL010001827.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2498)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2498)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2498
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162761"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            13..396
                     /locus_tag="VE844_18410"
     CDS             13..396
                     /locus_tag="VE844_18410"
                     /inference="COORDINATES: protein motif:HMM:NF017088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HZC03250.1"
                     /translation="MEETMMHRYLILTAALIGAVGLAHAQQPPTNSVLPLVEVEDEAM
                     MVEHFNLSVNELEDMEVTDSGGKRIGEVEDVLMTPEGEITAVAVEVVSDKEVVMELAQ
                     LRRQGDVLITDLTEEQVEALPSWDD"
     gene            complement(417..752)
                     /locus_tag="VE844_18415"
     CDS             complement(417..752)
                     /locus_tag="VE844_18415"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding domain-containing protein"
                     /protein_id="HZC03251.1"
                     /translation="MKPRLAMMCVLTLSVMLFGPFAFAQEPPPPQAQEPQERQMITGL
                     DGKEYESYKTSVIEAVQAALQRAGVYSGAVNGVLDETTMQAIGEFQKQNGIHVSGVPS
                     PKTREALGL"
     gene            complement(1214..2263)
                     /locus_tag="VE844_18420"
     CDS             complement(1214..2263)
                     /locus_tag="VE844_18420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017325267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZC03252.1"
                     /translation="MTEQRRSYAGQHVYVGIDVHKDTYTVTCLHHKRIVKTATVQADP
                     AGLAASLLRWFPEAVLWSVYEAGFSAFVLHRALTQAGITNIVVNPASIAVAANDKVKT
                     DRRDAKKLAFDLADGRLRGIYVPTEQEELARLLPRTRAQIVEHRARVARQIKAKLHQF
                     GLIAPASRRLITHRYLREIETWSLPVELRTSLSWLAEQWRFATRQLIDIRRLLREQAR
                     AQQSLESVYRSVPGVGEVAARILATELGDMTRFANERALFSYTGLTPREYSSGSSIRR
                     GPISRQGSSRVRHVLIEIAWRAVSRDAALQAIFERIAARRGKQRAIVAMARRLVGRIR
                     ACFRQGTRYALGTYA"
BASE COUNT          513 a          751 c          699 g          535 t
ORIGIN      
        1 tagaagattc tcatggagga gacgatgatg catcgatatc tgattctcac agcagctctt
       61 atcggcgccg tcggattggc ccatgcgcag cagcccccca ccaactccgt tctgccgctt
      121 gttgaggtcg aggacgaggc catgatggtc gagcatttca acctgtcagt gaatgagctt
      181 gaagacatgg aggtcaccga ttctggcggc aagcgtattg gagaagtcga agacgttctg
      241 atgacccctg agggggagat caccgctgtg gcggttgaag ttgtcagtga caaggaggtc
      301 gtgatggagc ttgcccagtt gcgccgccag ggagacgtcc tcatcactga tttgactgag
      361 gagcaggtcg aagcactgcc aagctgggac gactagccat catctgacgc ccccttctac
      421 aggcccaagg cttcgcgcgt cttaggtgac ggtacgccac tcacgtggat tccattctgc
      481 ttttgaaatt caccgattgc ctgcatcgtc gtttcatcca ggaccccgtt cactgcaccc
      541 gagtaaacgc ccgccctctg caaggcagct tgtacagctt caatcacgga cgtcttgtat
      601 gattcgtatt ccttcccgtc aaggcccgta atcatttgcc tctcttgcgg ctcctgcgcc
      661 tgcggcgggg gcggttcctg ggcaaaggcg aaagggccga acagcatgac actcagagtc
      721 aagacacaca tcattgccag tcttggcttc attacacacc tcctgttatg tgaattttca
      781 agaaaaaaag aaaacctctc cctgagcggt acagcgcacc gctttttatt cttcctgttc
      841 ctcactgaat ctagcctgcg aacgctccct cagagggcaa tcttctcggc tgaacgacct
      901 gttattcgag gtcgcggccg tagccacgcc tcccgttgct tatgcgttcg tgaccaagag
      961 tgtctctgcg cttcacactt ataaccgtgc tggcaggcat gccggcacca ggaggaacac
     1021 gaagtcgcag cgtcacgttg ttcatacctg ggcgagaaga cgtcgatctg tgttgggcac
     1081 cgccgctctc ttgcttctcc ttttcgcctc acagcctgga ggtcatggtg ctctggagct
     1141 aatgtccgta aagccacatc gcgcgacacg acggtccgag cggctctgct tcacgcctgt
     1201 ccccaggtgg ggcctaggca tacgttccta atgcataccg ggtcccctga cgaaaacagg
     1261 cacgaatccg cccgactaga cggcgagcca tcgcgacaat cgcgcgctgt ttgccccgcc
     1321 tcgccgcaat gcgctcaaat atcgcctgga gtgccgcgtc acgcgatacc gcacgccagg
     1381 cgatttcgat cagtacgtga cgcacacgac tggagccttg gcggcttatg gggcctcgcc
     1441 gtatggagct ccctgatgaa tattcacggg gcgtaagtcc tgtataactg aacagggccc
     1501 gctcattggc aaagcgtgtc atgtcgccca actcagtcgc taagatgcgg gcggcgacct
     1561 cgccaacccc cgggacgctg cggtacacgc tttcgagcga ctgctgcgcc cgggcttgtt
     1621 cacgcaacaa acggcgtata tcgatgagct ggcgggtggc aaaacgccac tgctccgcta
     1681 accacgagag gcttgttcgc agctccacgg gtagcgacca ggtttcaatc tcgcgcaaat
     1741 accggtgcgt gatcaagcgc cggctggccg gcgcaatcag gccaaactgg tgcaatttcg
     1801 ctttgatctg ccgggcgacc ctggcccggt gctcgacaat ctgtgcccgt gtgcggggca
     1861 gaagacgggc cagttcctct tgttccgtcg ggacgtaaat accgcgcaga cgaccatccg
     1921 ccaggtcaaa tgccagcttt ttggcgtccc ggcggtccgt cttgactttg tcgttggccg
     1981 cgacggcgat ggaggcgggg ttaaccacga tgttggtgat gccggcctgc gtcagcgcgc
     2041 gatgcagcac gaaggccgaa aacccggcct catagaccga ccagaggacg gcctcgggga
     2101 accagcgcag caaactggcg gccaagcccg cggggtcagc ttgcaccgtc gccgtcttga
     2161 cgatgcgttt gtggtgcaga caggtcacgg tataggtgtc cttgtgtaca tcgataccca
     2221 cgtaaacatg ttggccggca tacgagcgac gttgctctgt catgtgatcg tccttctcaa
     2281 ggtatgacta atcagcgacc ttgaaaggat tttctcattt ttccctgctc tctcggcaat
     2341 gccctcgaaa gctaattcag catagcaact tatacgccag gcgtaggaaa aatgcccttg
     2401 cagtttgcac aagcgtaacc gcgcttatgc aacaccccag gtaccgagca taaagcgtgc
     2461 cagatagccc cggaggggcc ggcacttaga cccagcac
//
LOCUS       DASQSL010001828         1026 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_172519, whole genome shotgun sequence.
ACCESSION   DASQSL010001828 DASQSL010000000
VERSION     DASQSL010001828.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172519"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            19..477
                     /locus_tag="VE844_18425"
     CDS             19..477
                     /locus_tag="VE844_18425"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HZC03253.1"
                     /translation="MAGHIRASGVVVYYLEQDEPNFLLLRSRRDRSWGFPKGHLLEGE
                     ALLSGAMRELWEETGIREVSLVSGFTEHVTYRVNRAGKFRQKTVTYFLGRVETSAVRL
                     SDEHSEHRWAVVEDARKILTFENLRTLVTRAWMLVTPLSPQLEAESSPLP"
     gene            838..>1026
                     /locus_tag="VE844_18430"
     CDS             838..>1026
                     /locus_tag="VE844_18430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03254.1"
                     /translation="MHDADLAALAEEMWAITKDLIKFLQFRDRDAMTACGLSVAQCYS
                     LDAIGTAGQVTLNELAEAL"
BASE COUNT          221 a          291 c          293 g          221 t
ORIGIN      
        1 cactgaggga gaagggcgat ggctggccat attcgggcaa gtggcgtcgt agtatattat
       61 ctcgagcagg acgagccgaa ttttctgctg cttcgcagcc gccgtgatcg ctcatgggga
      121 ttccccaaag gccatctcct cgagggtgaa gcgcttctga gcggcgccat gcgggagttg
      181 tgggaagaaa ccggcatccg cgaagtctcc ctggtctcgg gcttcaccga gcacgtgacg
      241 taccgtgtca accgggccgg aaagtttcgg cagaagactg tcacttactt cctcgggcgc
      301 gtcgagacct cagccgtacg gctctccgac gaacatagcg aacaccgctg ggctgtggtc
      361 gaggatgccc ggaaaattct gactttcgag aatcttcgga ctctggtcac acgggcgtgg
      421 atgcttgtca cccctttatc gccgcagctt gaggccgaaa gttcccccct gccttaaccg
      481 tcataaaagg gttgaccgca tttcggcgtg ccctggcccc cgatcatcgc cagcaggcga
      541 gaacggttgc cgtgccgatg tctggaatcc acctgagtat tcccctggcg ggcaaacatt
      601 cccccataca tacgctagac atctgagtgc aagccgctat cggtcagccc gtccacctca
      661 tagtcaacat gtagaacatc cgtgtagaac accgcaagct accgcgcctc cttgcacccc
      721 gcatggattc gcgagtgtag aatgtgaggc tgcacaccta agccccttga caaaatattt
      781 gtgtatggat atatttggtt tacgaaaata ttgtgggtta aaatatttgg agatgacatg
      841 cacgacgccg atttagccgc gctggcggaa gagatgtggg ccatcaccaa ggatctgatc
      901 aaatttctcc agttccgcga ccgcgacgcg atgaccgcct gtgggctgtc ggtagcccag
      961 tgctatagct tggatgccat cggtacggcg gggcaggtga cgctcaacga actggcagaa
     1021 gccttg
//
LOCUS       DASQSL010001829         2461 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_149791, whole genome shotgun sequence.
ACCESSION   DASQSL010001829 DASQSL010000000
VERSION     DASQSL010001829.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2461
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149791"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1027
                     /gene="prfB"
                     /locus_tag="VE844_18435"
     CDS             <1..1027
                     /gene="prfB"
                     /locus_tag="VE844_18435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006787237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HZC03255.1"
                     /translation="YEGKRERLTELVRELEAPNLWNQPTRAQQLGKERADLEQVIHNL
                     DSLEQGIREAAQLLEIAEIEQDQGTAQAVGSDVETLERQLSDMEFRRMFPGQMDPNNA
                     FLDIQAGSGGTEAQDWAEMLLRMYLKWGDRHQFKTELMEVSPAEVAGIKSATVYFQGS
                     YAYGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVSPEVEENIDIVINPAELRVDTY
                     RASGAGGQHVNRTDSAVRITHLPSGIVVQCQSERSQHQNRAQAMKQLTAKLYEMETQK
                     RTAEKQALEESKADIGWGSQIRSYVLDQSRIKDLRTGIEVGNTQAVLDGGDLLDQFIE
                     ASLKSGV"
     gene            1033..>2461
                     /gene="lysS"
                     /locus_tag="VE844_18440"
     CDS             1033..>2461
                     /gene="lysS"
                     /locus_tag="VE844_18440"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013819879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HZC03256.1"
                     /translation="MSDLDAQNQSAQRRAKLDALRATANPYPNNFRRDALAGEIHARY
                     GHEDNAKLEAADPPIRVRIAGRMMTRRIMGQAAFAHLQDMSGRIQIYLRRDRLPEGHY
                     AEFKEWDLGDILGVTGTVFKTKTGEISVMVEEIRVLAKALHPLPEKFHGLSDQEMRYR
                     QRYLDLIMNEDTRRTFRVRSAAVDFIRRFLQKEGFIEVETPMMQVIPGGAAARPFVTY
                     HHSLELELYLRVAPELYLKRLVVGGIEKVFEINRNFRNEGLSTRHNPEFTMLEFYQAY
                     ANYQDLMDLTEELLRSLAHSVLGTTTLRYQGEHYDLAQPFARMTLREAILRYNPALEP
                     AALDSLEPARAFARKHGIAIEEGSGLGKIQLELFEKTVEHRLGGPCFITAFPTEVSPL
                     ARRNDRDPWVTDRFELFIGGHEIANGFSELNDPEDQAERFQRQAQEKAAGHEEAMHYD
                     ADYILALEYGMPPTAGEGMGIDRLVM"
BASE COUNT          541 a          699 c          737 g          484 t
ORIGIN      
        1 ctatgagggt aaacgcgaac ggctcacaga gctcgtgcgt gaattggaag cgccgaacct
       61 atggaatcaa cccaccaggg cccagcaatt agggaaagaa cgcgcagact tggaacaggt
      121 tatccataac ctcgacagcc tcgagcaggg gatcagggag gcggctcaat tgcttgagat
      181 cgccgagatc gagcaggatc agggcactgc ccaagcggta gggagtgatg ttgaaaccct
      241 cgagcggcag ctcagcgata tggagttccg gcggatgttc ccgggccaaa tggaccccaa
      301 caatgccttc ctcgatatcc aggcagggtc tgggggtacc gaggcccagg attgggcgga
      361 gatgctgctc agaatgtatc tcaagtgggg cgatcgccac caattcaaga ctgaattgat
      421 ggaggtgtcg ccggccgaag tcgccgggat caaaagcgcc accgtatatt tccagggtag
      481 ctatgcgtat ggctggctgc gcaccgagac cggtgtccac cggctggtgc gcaaatcgcc
      541 ctttgattcg ggtaaccgcc gccacacctc ctttgcctca gtgtttgtct cacccgaagt
      601 ggaggagaac atcgatattg tgatcaatcc tgccgagctc cgggtcgata cctaccgggc
      661 gagcggcgcc ggagggcagc atgtcaaccg gaccgattct gcggtacgga tcacgcatct
      721 ccctagcggt atcgtagtcc aatgccaaag cgaacgctcg cagcaccaaa atcgcgccca
      781 ggccatgaaa caattgaccg ccaagctcta tgaaatggaa acgcagaagc gcacggccga
      841 aaaacaagcg ctggaggaat ccaaggccga tattggctgg ggcagccaga tccgttccta
      901 tgtgctggat caatcgcgca tcaaggatct gcgcaccggg attgaggtcg gcaatactca
      961 ggcagttttg gatggagggg atctcctcga tcaatttatc gaggcgagtt tgaagagcgg
     1021 cgtgtgaccc ccatgagcga tctcgatgcc cagaatcagt cggcccaacg ccgggccaag
     1081 cttgatgcgc tgcgcgccac ggccaacccc tatcccaaca atttccggcg cgatgcctta
     1141 gccggtgaga ttcacgcccg ttatggccat gaagacaatg ccaagcttga ggctgccgac
     1201 cctcctattc gtgtgcgcat cgccggccgg atgatgacgc ggcggatcat ggggcaggcg
     1261 gcctttgcgc atctgcagga tatgtcgggt cgcatccaga tctatctgcg ccgggatagg
     1321 ctacccgaag gccactacgc ggaattcaaa gagtgggact tgggcgatat cctcggggtc
     1381 acaggcacgg tcttcaaaac caagaccggc gagatctcgg tgatggtgga ggagatccgc
     1441 gtgctggcca aggccctcca tcccttgccg gagaagtttc atgggctctc cgatcaggag
     1501 atgcgctacc gccagcggta tctggatctc atcatgaacg aggacacccg gcggaccttt
     1561 cgagtgcgtt cggccgctgt cgatttcatt cgccggtttc tgcaaaaaga aggcttcatt
     1621 gaggtcgaga ccccgatgat gcaagtcatt ccagggggtg cggcggcgcg tccgtttgtc
     1681 acctatcacc atagcctgga gctcgagctc tatctccggg tagcgccaga gttgtacctc
     1741 aagcgcttgg tggtcggcgg tatcgagaag gtcttcgaga tcaaccgcaa ttttcgcaac
     1801 gaaggcctct cgacgcgaca caaccccgaa ttcaccatgc tcgagttcta tcaggcctat
     1861 gccaattatc aggatctcat ggatctgacc gaggaactgc tgcgctcgct cgcgcattcg
     1921 gtattgggta cgaccaccct ccgttatcag ggcgagcact acgatctggc gcagcccttc
     1981 gcccgtatga ccctgcgcga ggcgatactg cgctataacc ccgcgcttga gccggccgcg
     2041 ctggattcgc ttgagcccgc ccgggccttt gcccgtaagc atgggattgc gatcgaagag
     2101 ggctcggggt tgggtaagat ccagctcgaa ctcttcgaga agaccgtgga acacaggctt
     2161 ggtggcccct gttttatcac tgctttcccg accgaggtct caccgcttgc gcgccgcaat
     2221 gaccgcgatc cctgggttac ggatcggttt gagctcttta ttggcggaca cgagatcgcc
     2281 aatggctttt ccgaattaaa tgatcccgag gaccaagccg agcggttcca acgacaagcc
     2341 caagaaaaag cagccgggca tgaggaggcc atgcactatg atgccgatta tatcctggcc
     2401 ttggaatatg gaatgccgcc aacagcaggg gaagggatgg gcatcgatcg gttggtgatg
     2461 c
//
LOCUS       DASQSL010001830         1500 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_149797, whole genome shotgun sequence.
ACCESSION   DASQSL010001830 DASQSL010000000
VERSION     DASQSL010001830.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1500)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1500)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1500
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149797"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(176..832)
                     /locus_tag="VE844_18445"
     CDS             complement(176..832)
                     /locus_tag="VE844_18445"
                     /inference="COORDINATES: protein motif:HMM:NF017672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA];
                     GO_process: GO:0006672 - ceramide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ceramidase domain-containing protein"
                     /protein_id="HZC03257.1"
                     /translation="MTDVMDVYCERVGPGLLAEPLNAVSNASFLLAAWAAWVLAKRTG
                     TLSAGVRALIAMAASVAIGSILWHTYPTALTLILDIIPILIFIIWYIWLYTRNVIGMR
                     SLFAVASAAAFLLATFVAIQYSDVLHGALVYSPGLLVVVVFGVFHARERMVARFTLLA
                     AAGVYLAALFFRTIDNEVCPVLPIGTHYFWHLLVGLVTYLVMRALILSTRTQVGAEVR
                     "
     gene            complement(961..1485)
                     /locus_tag="VE844_18450"
     CDS             complement(961..1485)
                     /locus_tag="VE844_18450"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZC03258.1"
                     /translation="MSNFLGMVALMRGDEGQAIPMFKEGLAAARRIGDRTSTCTALYN
                     LAQAALSRSDYEEAALLFEEGVTLSEQMRDRANVAYCLEGLAVVANARGEAERSGHLS
                     GAAEGLHEAVGVPVYSYYEPHRSRYERTMAAVRSQLGGEVFEAVRAEGRKMTFEQAVA
                     YALSIADTPERPKP"
BASE COUNT          335 a          477 c          416 g          272 t
ORIGIN      
        1 agaataatac cccttcgtga acccactttc aagggctttt ttcagaggtg agggctaaga
       61 gcgtattgca aaacccagca tagtgattcg acgcttcccc gtcatgagca cccggcttgg
      121 aacgacccca aattcttcgc aaacattggt accaagtccg gcagtgtgca gaggtttacc
      181 gcacttctgc accaacttgc gttctagtgc taagtatcaa ggcgcgcatt accagatacg
      241 taacaagccc gaccaaaagg tgccagaagt aatgagtgcc gatcggtagg acaggacaga
      301 cctcgttatc aatcgtgcgg aagaagagag ctgccagata aacacccgcg gctgcaagca
      361 gggtgaagcg ggcaaccatc cgttctctcg cgtggaatac tccgaacacc actacgacca
      421 gcaaaccggg cgaatagacg agggccccat ggagaacgtc agaatattga atggcaacaa
      481 aggttgccaa caggaacgcc gcagcagatg ctacagcgaa tagtgaccgc atccctatga
      541 catttcgtgt atagagccag atgtaccaga tgatgaagat caggatcggg atgatatcga
      601 ggatcagcgt caacgccgtt gggtacgtgt gccacagaat actcccgata gcgacggagg
      661 ctgccatcgc aatcagcgct cggactcccg ccgaaagagt gccagtgcgt ttggccagca
      721 cccaggctgc ccacgcggcc aataggaagg acgcgttaga cactgcgttc agcggctccg
      781 cgagcaaccc cggcccaact cgttcacagt agacatccat cacatccgtc atgtaggccc
      841 tccacattcc gctctcaaca catgctcatg atgatagagc ggtcggagtg gtgctgcgac
      901 gggacgacgc ccgcctcctg accttagccg gaggccgtcg aggggctttg caacgcgctc
      961 ttagggcttc ggtctctctg gtgtgtcggc tatcgagagc gcgtaggcga cggcttgctc
     1021 aaaggtcatc ttccgcccct cagcccgcac cgcctcgaag acctccccgc ccagctgcga
     1081 acgtacggcg gccatcgtgc gctcatacct cgagcggtgg ggctcgtaat acgagtaaac
     1141 gggcactcca accgcctcgt gcaacccctc agccgcgccg ctcaggtgcc cactgcgctc
     1201 cgcctctccg cgcgcgttgg ccaccacggc aagtccctcc aggcagtagg ccacgttggc
     1261 ccggtcccgc atctgctcgg agagggtcac gccctcctcg aagaggagcg cggcctcctc
     1321 gtagtcgctg cgggagagag ccgcctgcgc caggttgtag agcgcggtgc aggtactggt
     1381 cctatctcct atccggcggg ccgctgcaag cccctccttg aacatcggta tcgcttggcc
     1441 ttcgtcaccg cgcatcagcg ccaccatccc caaaaagttg ctcacgtgag ccacgccgta
//
LOCUS       DASQSL010001831         1548 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_80568, whole genome shotgun sequence.
ACCESSION   DASQSL010001831 DASQSL010000000
VERSION     DASQSL010001831.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80568"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            180..464
                     /locus_tag="VE844_18455"
     CDS             180..464
                     /locus_tag="VE844_18455"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZC03259.1"
                     /translation="MLHAHEDTLRTIYDAFAKGDVETVMSLLTDDIEYHITGRSPVSG
                     NYSGKEEVLGFFGKLMQLSGGTFRLEVEDILANDEHGVALTIKAYSQASL"
     gene            complement(443..1210)
                     /locus_tag="VE844_18460"
     CDS             complement(443..1210)
                     /locus_tag="VE844_18460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005438063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC03260.1"
                     /translation="MYHTTGFTRDEIVDLCARVHAVNEAAAESEKVTWPPILGLFTSV
                     VVTLTYLRRNRIQAEIGESYGVSQSTVSRAVTALTPLLGTTLARYVPVAEDLSSQVHY
                     IVDGTLLPCWSWAAYPTLYSGKHKTTGMNVQVACTLTGGLAWISDPITGSRHDTYCLK
                     ESGVLAGEPENWMGDKGYVGNDMLTPIRKPTHRDLLDWEKEFNKQINKIRYVIEQVIA
                     NFKTWRIMHTDYRRPLGTFTQTISTVIALHFYKLACE"
BASE COUNT          328 a          421 c          471 g          328 t
ORIGIN      
        1 aagcttggtg tggagggacg agctcagctc gctcgggccc tcgaaacttc ctgagccgct
       61 cggctccggt tgctgcccga acgtcaaaca gagtggtcac cactctcccc cgacggtcgc
      121 agagtgggca ttgtcatttc aggacgacaa catcggtagg gaactgggaa ggtgacgata
      181 tgttacacgc gcatgaggac acgctcagga ccatctacga cgccttcgcc aagggtgatg
      241 tggaaacggt catgagcttg ctcaccgacg acatcgagta ccacataacc ggccggagtc
      301 ccgtgtcggg taactactcg ggcaaggagg aagtcctcgg cttctttgga aagttaatgc
      361 agctttctgg cggcaccttt cgactggagg ttgaggacat cctggcaaac gatgagcatg
      421 gcgtcgctct caccattaag gcttattcac aggctagttt gtagaagtgt agtgcgatga
      481 cggttgagat ggtctgggtg aacgtgccca gagggcgccg atagtcggta tgcatgattc
      541 tccaggtctt gaagttcgcg atgacctgtt cgatgacgta acggattttg ttgatctgct
      601 tgttgaactc tttctcccag tccagcaggt cccggtgggt gggttttctg atgggggtga
      661 gcatgtcgtt gccgacatag cccttgtcgc ccatccagtt ctcgggctca ccggccaaga
      721 cgccggattc tttcaggcag taggtgtcat ggcgactgcc ggtgatcggg tcggagatcc
      781 acgcgaggcc tccggtgaga gtgcaggcga cttgcacatt catgccggtg gtcttgtgct
      841 tgccggagta caacgtcggg tacgcggccc aagaccagca gggcagcaag gtgccgtcga
      901 cgatgtagtg gacctgcgag cttagatcct cggccacggg cacataccgt gccagcgtgg
      961 tgcccaacag cggcgtcagc gccgtaacgg cacggctgac cgtggactgc gacaccccgt
     1021 atgactcgcc gatctcggct tggatccggt ttctgcgcag atacgtcaac gtgactacca
     1081 ccgacgtgaa caaccccagg atcggcggcc acgtgacctt ttcagactca gcggccgcct
     1141 cgttcacagc gtgtacacgg gcgcacaagt cgacaatttc gtctctcgtg aagcctgttg
     1201 tatgatacat cccggacggc tcgtttctga ggattgagtg tggtaaccca attctttcga
     1261 gaaacgagcc gtccgctacg gaggcgcgcc gaaacggccg caattaacta ccgcgtgaat
     1321 aaccctcatt gagtggggtc agcgcgacgg caaaaccctg aataatcagg ctgtgcacgt
     1381 ttgggatatc cgagaaggca aatttgcaca attccgaggc tacaacgaga acacctggga
     1441 cgaattctgg gcgtaaaggt gcgctggagc agaaataacg ggtcagacgt cgttgacgtc
     1501 agttggttgg acggcatccg accatcgtcc aaatcagcac gccgaggc
//
LOCUS       DASQSL010001832         1166 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_52435, whole genome shotgun sequence.
ACCESSION   DASQSL010001832 DASQSL010000000
VERSION     DASQSL010001832.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1166
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52435"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..741)
                     /locus_tag="VE844_18465"
     CDS             complement(<1..741)
                     /locus_tag="VE844_18465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008093393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3616 domain-containing protein"
                     /protein_id="HZC03261.1"
                     /translation="MNAMNVVLLAFQPERDDLGKDKELRDGLSVVVQIGDTLWVTNDE
                     TISLERLSLVEGGNTGNYKYGRHHKQFSLNDYLRLPAPPPPDPADLEEADVEGLAYAD
                     DYLWLVGSQSLKRKKPKLKDGAKEAQKQLAQVSSDGNRYLLARIPIAEGDGTYTLAKE
                     DTQNGKKRTAAQLHGSETGNDLTDALGKDEHWGSFLAIPGKDNGFDIEGLAVTGERLF
                     LGLRGPVLRGWAVILEVELKEDNKQPSTL"
     gene            887..1066
                     /locus_tag="VE844_18470"
     CDS             887..1066
                     /locus_tag="VE844_18470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03262.1"
                     /translation="MLITSILAVYRSCPVMVVAETEEGILLELSLKELADMYEFLPPV
                     LWQALVEQYHVFQVA"
BASE COUNT          228 a          340 c          317 g          281 t
ORIGIN      
        1 cagagtagat ggctgcttgt tatcctcctt gagttccact tccaggatca ctgcccagcc
       61 acgtaggacc ggcccgcgca gcccaagaaa gagacgctcg cccgtcacgg ccaagccctc
      121 aatatcgaac ccattgtcct tgcctgggat ggcgaggaac gatccccaat gctcgtcctt
      181 tcccaacgca tcagtcaagt cgttacccgt ttcgctccca tgcagttggg cggcagtgcg
      241 tttcttcccg ttctgcgtat cttctttcgc caaggtgtac gtcccgtcgc cttccgcaat
      301 ggggatgcga gccagaaggt aacggttgcc gtcactgctc acttgcgcca actgcttctg
      361 ggcctccttg gcgccatcct tcagtttcgg ctttttgcgc ttgaggctct gtgatcccac
      421 cagccagaga tagtcgtctg cgtaggccag cccttcgacg tctgcctcct ccaggtctgc
      481 gggatcagga ggcggcggcg ctggaagccg aaggtagtcg ttgagcgaga actgcttgtg
      541 atgtcggcca tatttgtagt tgcccgtgtt tcctccctcg acgagggaga gccgttccag
      601 gctgatcgtc tcgtcgttgg tgacccagag ggtatcgccg atctgcacca caacggacag
      661 cccgtctctg agctccttgt ccttacccaa gtcatcgcgt tcgggctgaa acgccaggag
      721 aacgacattc atcgcgttca tgacgacagt cccctgcttt cttcgcgttt tcttgcactt
      781 ccggcaactc cgtcagactg gcatgcacgt ccatgggcat cctccttcgg cagaagagga
      841 taccacgcca gaaccggcgc taacaaagta gtactagggg acaaccgtgc tcataacaag
      901 cattttggcc gtgtaccgta gctgtccggt aatggtcgtg gcggagacgg aggagggaat
      961 tcttctggaa ctttcattaa aggagctggc cgatatgtat gagtttcttc ctcccgtgct
     1021 ctggcaagcg ctcgtagaac aatatcacgt ctttcaagta gcatgagaga gataagtcgt
     1081 tgttcatcgt ctatgaggac acatgggagg atgggactcc gctcttgacc ggtcataaag
     1141 gcgcggttat agtcaagctc atggaa
//
LOCUS       DASQSL010001833         2234 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_172560, whole genome shotgun sequence.
ACCESSION   DASQSL010001833 DASQSL010000000
VERSION     DASQSL010001833.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2234
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172560"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..946
                     /locus_tag="VE844_18475"
     CDS             <1..946
                     /locus_tag="VE844_18475"
                     /inference="COORDINATES: protein motif:HMM:NF033550.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ISL3 family transposase"
                     /protein_id="HZC03263.1"
                     /translation="TEQLLNIPGIRVLSVRVEAHTIKCEMESTPGYSMCHRCGQKATE
                     FHGYNQALELRHRPLCARPVILRLRPKRYRCRYCEGAVTTTERAEWYDAKAGCTKAYT
                     EFLLLELVNGTLQDVAKKHGISYDIVRGVLKRYVKGEVDCSQIRALGLLGVDEISLLK
                     GHSDFVTLVSAHDEQGRPIVLAVLEGREKQGLVDFLKTIPKGLQDTIKEVCTDLYEGF
                     INAVEEVLPQAKIVADRFHVTKLYCAAVDALRKTELKALKGALTKEQYAGLKGVLWAL
                     RKRSENLAPEEVAQIFDPVRTALEHLDFVVQSFDPAAR"
     gene            complement(848..2050)
                     /locus_tag="VE844_18480"
     CDS             complement(848..2050)
                     /locus_tag="VE844_18480"
                     /inference="COORDINATES: protein motif:HMM:NF033550.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3 family transposase"
                     /protein_id="HZC03264.1"
                     /translation="MIIPTEQLLNIPGIRVLSVRVEAHSIKCEIESTQGYSLCHRCGQ
                     KATEFHGYDQALEVRHLPLCGRPVILRLRPKRYRCRYCEGVVTTTERAEWYDAKAGCT
                     KAYAEFLLLEVVNGTLQDVAKKHGVTYDVVRGVLKRYVKGEVDWSQIKALGLLGVDEI
                     SLLKGHSDFVTLVSAHDEQGRLIVLAVLEGREKQTLVDFLKTIPTRLQETIKEVCTDL
                     YDGFIHAAEEVLPQAKIVADRFHVTKLYRAAVDAVRKTELKALKGALTKEQYAGLKGV
                     LWALRKRRENLEPEEHALLDRLFDASPLLRKAYTLREKLTRIFDKDHSKKSGRRAIRR
                     WMAAVRNSGLDCFDQFLTTLENRMDLITNYFISRSSSGWVEGLNNKIKVLKRRSYGVK
                     NLGNLFRR"
     gene            2127..2234
                     /locus_tag="VE844_18485"
                     /pseudo
     CDS             2127..2234
                     /locus_tag="VE844_18485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017308155.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase
                     domain-containing protein"
BASE COUNT          478 a          625 c          640 g          491 t
ORIGIN      
        1 cactgagcaa ctgctgaaca tcccgggaat tcgcgtattg agcgtcaggg ttgaagcgca
       61 caccatcaag tgtgagatgg agtccacccc gggctattcg atgtgtcacc ggtgtggcca
      121 gaaggccacg gaatttcacg gctacaacca agcgttggaa ctgcgtcacc ggcctctgtg
      181 tgctcggccc gtgattctgc ggttgcgtcc caagcgctat cgttgtcgct attgcgaggg
      241 cgccgtgacc accaccgagc gagcggagtg gtacgatgcc aaagccggtt gtaccaaagc
      301 ctatacggaa tttctcctac tcgaactggt caacggcacc cttcaagatg tcgccaagaa
      361 gcatgggatt agttacgata tcgtgcgtgg cgtgctcaaa cgctacgtca agggcgaagt
      421 cgattgcagt caaatcaggg ctctcggcct gttgggagtg gatgaaatct cgctgctcaa
      481 agggcattcc gattttgtca cgctggtcag tgcgcacgat gagcaaggaa ggcccatcgt
      541 gttggcggtg ctcgaaggcc gcgagaagca ggggctggtc gattttctca agaccatccc
      601 caaggggttg caagacacga tcaaagaggt ttgcaccgac ctctatgagg gcttcatcaa
      661 cgccgtagaa gaggtgctgc ctcaggccaa gatcgtcgcg gatcgcttcc atgtgaccaa
      721 actctattgc gcggccgttg acgcattacg caagaccgag ctgaaagcgc tcaaaggggc
      781 cctcacgaaa gaacaatacg ccggactgaa aggcgtgctg tgggccttgc gcaagaggag
      841 tgagaactta gcgccggaag aggttgccca gatttttgac cccgtaagaa cggcgcttga
      901 gcaccttgat tttgttgttc agtccttcga cccagccgct cgatgaacgg ctgatgaagt
      961 agttggtgat gaggtccatt cggttttcca aggtggtgag gaattggtcg aagcagtcca
     1021 ggccgctgtt tctgaccgcg gccatccacc ggcggatcgc tcggcggcca gatttcttgg
     1081 aatggtcttt gtcaaagatt cgggtcagtt tttcgcgcag ggtatacgcc ttgcgcagca
     1141 agggggaagc atcgaacagc cgatcaagga gcgcgtgctc ttcgggctcg aggttctcgc
     1201 gccgctttcg caaggcccac agcacccctt tcagtccagc gtattgttct ttcgtgaggg
     1261 cccctttgag tgctttcagc tcggtcttgc gcactgcgtc aacggccgcg cgatagagtt
     1321 tggtcacatg gaagcgatcc gcgacgatct tggcctgggg cagtacctct tccgcggcgt
     1381 ggatgaagcc gtcatagaga tcggtgcaca cttctttgat cgtctcttgc aaccgcgtgg
     1441 ggatggtctt gagaaaatcg accagcgtct gcttctcgcg gccttcaagc accgccaaca
     1501 cgatgagcct tccttgctca tcgtgcgcac tgaccagcgt gacaaaatcg gaatgccctt
     1561 tgagcagcga gatttcatcc actcccagca ggccgagagc cttgatttga ctccaatcga
     1621 cttcgccctt gacgtagcgt ttgagcacgc cgcgcacgac atcgtaagtc accccgtgct
     1681 tcttggcgac atcttgaagg gtaccgttga ccacttcgag caggaggaat tccgcatagg
     1741 ctttggtaca accggctttg gcgtcgtacc actccgctcg ctcggtggtg gtcacaacgc
     1801 cctcgcaata acgacaccga taacgcttgg gacgcaaccg cagaatcacg ggccgaccac
     1861 acagaggtag gtgacgcact tccaatgcct ggtcgtagcc gtgaaattcc gtggccttct
     1921 ggccacaccg atgacacagc gaatagccct gggtggactc gatctcacac ttaatactgt
     1981 gcgcttcaac cctgacgctc aatacgcgaa ttcccgggat gttcagcagt tgctcagtgg
     2041 ggataatcat gggggtgctc cgggggataa tagtgattca ttgaccacaa tatattgggg
     2101 tatcccacgg caattcccaa agacccaaaa aacttgccga tgtgtcggcc gacgatttcg
     2161 gcgcagtctt ctatcccggt ggtcacggcc cgatgtggga tatgcccgac aacgcaactt
     2221 ccatcgcgct catc
//
LOCUS       DASQSL010001834         1371 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_200204, whole genome shotgun sequence.
ACCESSION   DASQSL010001834 DASQSL010000000
VERSION     DASQSL010001834.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1371
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200204"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            87..794
                     /locus_tag="VE844_18490"
     CDS             87..794
                     /locus_tag="VE844_18490"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03265.1"
                     /translation="MRLKMLPEGYIYPKEGRAVRDLLRQRSQLVRQKVTHILSIQNLM
                     SRNKGMRLSADKIRQLTEAEVERLLPQADLAVAVKSNLAVYRCLVEEIDRLEKVVKQR
                     LKLRPSFQSLLTVDGIGPILGMTIMLEMGVIGRFAGVGQFASYCRCVDSHKISNGKRK
                     GSGNTKNGNKYLAWAFVEAANFAICYNPRVKRFYQRKKERTNGMVAIKAMAHKLARAC
                     YYVLRDQVPFQVEKAFG"
BASE COUNT          317 a          331 c          426 g          297 t
ORIGIN      
        1 acttagccaa taccgcggcg atccagcaat atacggggct caagtatacc gatgaccgca
       61 gcgatgcgcg ttgattagcg catctgttgc gacttaagat gttgcccgaa gggtatattt
      121 atccgaagga gggacgggcg gtgcgggatc tattacgcca gcggagccaa ctggtgcggc
      181 agaaggtgac acacatatta agtattcaaa acctgatgag ccgtaacaag gggatgagac
      241 tcagcgccga taagatccga caattgactg aagccgaggt cgagcggctc cttccccaag
      301 cagatctggc agtggcggtg aaaagtaatc ttgcggtata ccggtgtctg gttgaggaaa
      361 ttgataggct ggagaaggtg gtgaaacagc ggctgaaact gcggccgagt tttcaatccc
      421 tcctgacggt cgatggtatc ggtccgattc tggggatgac catcatgttg gagatggggg
      481 ttattggccg cttcgcaggg gtgggccagt ttgcgtccta ttgccggtgc gtggacagcc
      541 acaagatcag caacggcaaa cgcaagggta gcggcaacac caagaatggg aacaagtatc
      601 tggcctgggc ctttgtagag gcggcgaact tcgccatctg ttacaacccg cgcgtgaagc
      661 gcttttatca gcgcaagaaa gaacggacca acgggatggt ggcgattaag gcgatggccc
      721 acaagttggc gcgggcctgt tattacgtgc tgcgggacca ggtccccttt caggtggaga
      781 aggccttcgg atgagcgaat aacggtttgg ctgggacagc gaagctcgaa taggggttgg
      841 cttagaacct aaagagtctg attggccgct gtcccaccct ttaattcggt agtccgtgaa
      901 ggtaacaggt tttagcggat acgccttggc cgtgagccag cgaagggttg gaaaacgctc
      961 cttggagagc cttagccatc gaatctgtca ttgaccgcgt agttttgcca ccctgtgtgt
     1021 tagacctccc ggtccaacac ttcgggcggc gcccattaaa gccactacgc tgatcacgct
     1081 acaggtggac acggccgggc accgacgttt tctggggcag tacagactgc caggggcagg
     1141 cagagttctc cttcgggagc atcctgccaa ggccttgtgc cttttgggtg acgggtgcgg
     1201 atccgtaggg accgacgcca cgcgatcgaa aacagggatg cgtatcgact tggttatcca
     1261 agcgggccct gttattggga acacgatctt aaaaaaaaat cgtgctaaaa gtaattttgc
     1321 ctattgctcg gcgttgcatc agtgtcttgt gagcacctgg cttgcgagca c
//
LOCUS       DASQSL010001835         1179 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_93087, whole genome shotgun sequence.
ACCESSION   DASQSL010001835 DASQSL010000000
VERSION     DASQSL010001835.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93087"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..462
                     /locus_tag="VE844_18495"
     CDS             <1..462
                     /locus_tag="VE844_18495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010547957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2333 family protein"
                     /protein_id="HZC03266.1"
                     /translation="VSKRLGDLANRLSASVPKAEAQLYEIGDIIPTAGTESQPELQPR
                     TKTKKRRKTTPWFQVDDIFFEARGTTWALRHFLTAIAADFGPVLQNKNAEASFKQVIN
                     YLKATQQPIWSPMILSGRGFGMWANHSLAMASYISRANAGIIDLVNLLAQG"
     gene            574..>1179
                     /locus_tag="VE844_18500"
     CDS             574..>1179
                     /locus_tag="VE844_18500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HZC03267.1"
                     /translation="MSGWTTPLDITAAVIIIGNEILSGRTADANLSYLGRRLAELGIN
                     LREARIVADSEEGIVAAVNACRAAYHYVFTTGGIGPTHDDITTRSIAKALGVPIECNS
                     EAVAKLTAYYTTSTLNEARLKMAEVPVGAVLIDNPISSAPGFQIGNVFVLAGIPAIMQ
                     VMFEGIRHRLTGGPPILSRTVSTVLTEGILAAGLEGIQKRYP"
BASE COUNT          265 a          337 c          328 g          249 t
ORIGIN      
        1 gtgagcaaga gactcggcga tctcgcgaac cgtctgagtg ccagtgtgcc aaaggcagag
       61 gcgcagctct atgagatcgg ggacatcatc cccaccgccg gcaccgaatc acaacccgaa
      121 ttacaaccca gaaccaaaac caaaaaacgc cgtaagacaa caccctggtt tcaggtcgac
      181 gacatcttct ttgaggcgcg cggtacaacc tgggccttgc gtcatttctt aacggcaatc
      241 gctgccgatt tcgggcctgt tcttcaaaac aagaatgctg aagccagttt caagcaagtg
      301 attaattatt taaaggccac tcagcagccg atatggagtc cgatgatact gagcggcagg
      361 ggttttggga tgtgggccaa ccattcccta gcgatggcgt cctatatctc acgggcaaac
      421 gcgggcatta tcgatctcgt caatttactt gcgcaaggct agtactccgt caacattaat
      481 ctgctgggag tgctcaccgt tcactcccac cctcccccat caagggggag ggaaatgttg
      541 acatagcact cgagatcgcc tttcagctta gctttgtcag gatggacgac gcccttagac
      601 atcaccgctg cggtaatcat catcggtaac gagatcctct ccggccgcac cgccgatgcg
      661 aatctttcct acctgggcag acggcttgcg gagctcggta ttaacctgcg cgaagcgcgg
      721 atcgtagcgg atagtgagga ggggattgtg gccgcggtga acgcctgtcg cgccgcttat
      781 cactacgtct ttaccaccgg cggcattggc ccgacccacg atgacatcac cacccgatcg
      841 attgctaagg ccctgggtgt gcctattgaa tgcaactctg aggctgtcgc taagctgacg
      901 gcgtattaca ccacctcgac tctcaacgaa gcgcggctaa agatggcgga ggtaccggtg
      961 ggtgcagtgc tcatcgataa tccgataagc agcgccccag ggtttcagat cggcaatgtg
     1021 tttgtgttag cggggatccc ggcgatcatg caggtgatgt tcgagggcat ccgccaccgg
     1081 ctcaccggtg gcccgccgat cctctcgcgc acggtgtcga ccgtgcttac cgagggtata
     1141 ctggcggcgg gactggaagg catacagaag cgttatcct
//
LOCUS       DASQSL010001836         1937 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_200220, whole genome shotgun sequence.
ACCESSION   DASQSL010001836 DASQSL010000000
VERSION     DASQSL010001836.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1937
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200220"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..427)
                     /gene="hisG"
                     /locus_tag="VE844_18505"
     CDS             complement(<1..427)
                     /gene="hisG"
                     /locus_tag="VE844_18505"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008930951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HZC03268.1"
                     /translation="MGLLDTPLTLAVSKGRILKQCLPLLASMGIELRVDPEASRSLII
                     PTNRDDIKLLVIRAVDVPTYVEYGAADLGIAGKDVLLEYQGEGLYEPLDLGIARCKLV
                     LAGPLAPKLRPGRLRVATKYVHTARRYFAEQGVQVEVIKL"
     gene            complement(428..1687)
                     /gene="murA"
                     /locus_tag="VE844_18510"
     CDS             complement(428..1687)
                     /gene="murA"
                     /locus_tag="VE844_18510"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010961211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HZC03269.1"
                     /translation="MDKLIISGGIPLNGEIPISGAKNAALPILAATLLADSPVTVGNV
                     PYLRDITTTMELLGRMGVQLMLDERMNIEVDSRPIKELFAPYELVRTMRASILVLGPL
                     LARFGRADVSLPGGCAIGARPVNLHLQGLARMGARIKVEGGYIRARAKRLKGAHLVMD
                     LVTVTGTENLMMAATLAEGTTVINNAAREPEVVDLAHCLIRMGAKIEGAGTDTITIAG
                     VDHLFGTYHNILADRIETGTYLTATAMTGGRIKLKNTRPSLVEAVLAKLREIGARIET
                     GEDWIVLDMGGRRPKAVDVHTAPYPGFPTDMQAQFTALNCIAQGTGAITESVFENRFM
                     HVLELQRMGANVRLEGNTAITCGVERLTGAPVMATDLRASASLVLAGLVAEGETRVAR
                     IYHIDRGYETIEEKLAQLGARIRRVPN"
     gene            complement(1742..1936)
                     /locus_tag="VE844_18515"
     CDS             complement(1742..1936)
                     /locus_tag="VE844_18515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HZC03270.1"
                     /translation="MESEDRIHFQATVISPAFSGLSMVKKHQLVYQALGDCMQSEIHA
                     LSITTLTPEEWDSACKQAGD"
BASE COUNT          400 a          597 c          533 g          407 t
ORIGIN      
        1 agagcttgat gacctcgacc tgcacccctt gctcggcaaa ataacggcgg gccgtatgaa
       61 catacttggt ggccacccgt aggcgccccg gcctgagctt gggcgcgagc ggacccgcca
      121 gcaccaattt acaccgggca atgccgagat ccaagggttc atacaacccc tccccctggt
      181 attccaataa tacatccttg ccggcgatac cgagatccgc cgccccgtat tctacgtaag
      241 taggcacatc cactgcccgg atcaccaaaa gctttatatc gtcgcggtta gtcgggatga
      301 taaggctgcg agaggcctcg ggatccaccc gcagctcaat ccccatactg gcgagcaggg
      361 gcaagcactg cttcaggatc cggcccttgg acacggcaag cgtcagcggc gtgtcgagga
      421 gacccattta attcggcacc cggcggatcc gcgccccaag ctgtgcaagc ttttcctcga
      481 tggtctcgta acctcgatcg atgtggtaga tccgggcaac gcgggtctcc ccttcggcaa
      541 ccagccctgc caacaccaag cttgcagagg cccgcagatc ggtggccatt accggcgcac
      601 cggtcaatct ctcgacccca caggtaatgg cggtattgcc ttcgagcctc acattggctc
      661 ccatccgttg cagctcgagc acatgcatga agcgattttc aaatactgac tcggtaatcg
      721 cgcccgtgcc ctgggcgatg caattcaaag cggtaaattg ggcctgcata tcggtaggaa
      781 aaccgggata gggcgccgtg tgcacatcca ccgccttggg tcttctacct cccatatcga
      841 gcacgatcca gtcctcgccc gtttcgatcc gggcgccgat ctccctgagt ttagcgagga
      901 ccgcttcgac gaggcttggg cgggtatttt taagcttgat gcgtccgcct gtcatagccg
      961 tagccgttaa ataggtcccc gtctcgatgc ggtcggctaa gatgttatga taggtgccga
     1021 aaagatgatc gacccctgca atcgtgatcg tatccgtacc tgccccttcg atcttggcgc
     1081 ccatacggat caggcagtgg gccagatcca ccacctcggg ttcacgggca gcgttgttaa
     1141 tgacggtggt gccctcggcc aaggtcgctg ccatcatgag attctcggta ccggtgaccg
     1201 tcaccagatc catgaccaga tgcgcgccct tcaggcgctt agcccgggcc cggatgtagc
     1261 cgccttccac tttgatgcgg gcgcccattc gggcaagccc ctggagatgg agattcaccg
     1321 gcctggcgcc aatcgcacag ccacccggca aagacacatc cgcccggcca aagcgtgcta
     1381 gcaagggtcc caacaccaga atcgaggcgc gcatggttcg aaccaattcg tagggggcga
     1441 agagctcctt gatggggcgg ctgtctacct cgatattcat ccgttcatcc agcatcaatt
     1501 gcacccccat gcgtcccagc agttccatgg tcgtagtgat gtctcgcagg taaggcacat
     1561 tgccgaccgt aaccgggcta tcggccagta gggtggcggc caggatcggc aacgccgcat
     1621 ttttagcacc cgagataggt atctcgccgt taagcggtat gccacccgat ataatcagct
     1681 tgtccatcgc atcttaatcg ttgagagcgg gtggaataga tcccaagcag tcgggtgagt
     1741 atcaatcccc cgcttgtttg cacgccgagt cccattcttc tggggtaagg gttgttattg
     1801 acaaggcgtg gatctccgac tgcatgcagt cgcccagggc ttgatacacg agttgatgct
     1861 ttttgaccat agataggcca ctgaaggctg ggctaatgac cgtagcctga aaatggatcc
     1921 tatcttcgct ctccacg
//
LOCUS       DASQSL010001837         2032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_137160, whole genome shotgun sequence.
ACCESSION   DASQSL010001837 DASQSL010000000
VERSION     DASQSL010001837.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2032
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137160"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..830)
                     /locus_tag="VE844_18520"
     CDS             complement(<1..830)
                     /locus_tag="VE844_18520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015182275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family peptidase"
                     /protein_id="HZC03271.1"
                     /translation="MVSINYDRLFATIEELVMHHSPSGVEQEIDGLLLERFRELGREV
                     GQDAAGNIIVKLSGREPGAIAITGHKDEIAAIVKSIGPEGRVAIRKLGGAFPWAYGEG
                     VVDLLGDTATISGILSFGSRHVSHESPQKAQQDEAPLRWQDAWVETKSTAEELKAAGV
                     RPGTRMVIGKHRKRPFRIKDYIASYTLDNKAAVAILLELAQSVQHPKVDTYLVASAKE
                     EIGALGALYFTKRQHLDALIALEISPVSAEYPIKEGPAPVLLSQDGYGLYDEELNAEL
                     "
     gene            1036..1362
                     /locus_tag="VE844_18525"
     CDS             1036..1362
                     /locus_tag="VE844_18525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010048701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HZC03272.1"
                     /translation="MGNKLYVGNLGYGIGDSDLEKLFMTYGSVRSAQVIKDRDTGRSK
                     GFGFVEMGSDQEAQAAITALNGKEIDGRTLVVNEARPKEGGGGRGKGGFGGRDRGGFG
                     GSGRRY"
BASE COUNT          437 a          573 c          622 g          400 t
ORIGIN      
        1 tggagttcgg cattcagttc ctcgtcgtaa agcccatagc cgtcctggga caaaagcacc
       61 ggcgccggcc cttccttaat cggatattcc gcggagacgg ggctgatctc caaggcaatc
      121 agggcgtcta aatgctgccg cttggtaaag tagagcgccc ccagcgctcc gatctcctcc
      181 ttggcggacg ctaccaggta ggtatccacc ttggggtgct gcacgctttg cgcgagttcg
      241 agcagaatcg cgacagccgc cttgttatcc agggtataac tggcaatata gtctttgatc
      301 cggaacgggc gcttgcgatg tttgccgatc accatacgcg tcccgggacg aaccccggcg
      361 gcttttaatt cctcggcggt ggatttggtc tcgacccagg cgtcttgcca gcgcagcggg
      421 gcctcgtctt gctgggcttt ctgcggcgat tcgtgggaga catggcgcga accgaatgaa
      481 aggatgccgc tgatagtggc tgtatcccca agcagatcca ccacaccctc accgtaggcc
      541 cagggaaacg caccgccgag cttcctgatc gcaacccgcc cttccggccc gatgcttttt
      601 acgatggccg cgatctcgtc cttgtggccg gtgatggcga tagcccccgg ttcccgcccg
      661 gatagcttga cgatgatatt ccccgccgca tcctgcccca cctctcgccc gagctcgcga
      721 aagcgctcca acaacagccc gtcgatctcc tgttccacac cgcttggcga atggtgcatc
      781 accaattcct cgatggtggc gaagagcctg tcataattga tggaaaccat gaatcaactc
      841 ctgaagagct tgagtagcgg gaaatccgca cgctacgttc tgtgggagcc agaggtgggt
      901 gaccgcctcc ggcgtcccta ccgcggaggt acccgctact tcatcacgac cgaagcatca
      961 gaagtctgac attttatacc actgctcatg atgattgtgg cattatatgc ccctctttac
     1021 tagaggagtt ccacaatggg caataagtta tatgttggca acctaggtta cggcatcggt
     1081 gacagtgacc tggaaaagct gttcatgacc tatggtagcg tacgctctgc gcaggtgatc
     1141 aaggatcgtg acacggggag atctaaaggg ttcggctttg tggagatggg cagcgaccag
     1201 gaagcgcaag cggccattac cgcactcaac ggcaaagaga tcgatggccg gaccttggta
     1261 gtcaatgagg cgcgccctaa ggaaggtggc ggcggacgcg gaaagggggg cttcggcggg
     1321 cgagaccgcg gtggctttgg tggcagcgga cgccggtact agcccagtgc ggcttacccc
     1381 aagcctcttt gcgtcttgag cgccgcacct aacaaccgct tggtcgggcc agggaaagcc
     1441 tgaagcgagg ggattggcac caaagtgata tgaaactcgc tagtgtttcc cggtgggtga
     1501 ccggtctttc aaccgacagg aaatcacccc tgcccaaagc ccgagggcca agcagtagag
     1561 gatctcgcat gcgtcggggt gccggggtgc gaaaccggaa ggatcgagcg tacaggctgc
     1621 ggctcaggct agaaaagtct ccggatgccc agtaaggtga agtggctctt ggaccttact
     1681 gggacggaaa cagagctacc tcaaggtatt ggcgaacgag ggacaaccga aggtcgtcga
     1741 ggggattgct cacaatggag gggttgcgga cctttataca aagaaaagag caccccgtca
     1801 tgtcaacagg actagaataa atagcagcga tcaagccgca ggggtgagct gcccaaggct
     1861 gcgcggctct gcatgccctg tgggtgcggt gctgtgaatc aacgcctgaa gagcttgaat
     1921 agcgggaaat ccgcacgcta cgttctgtgg gagccggagg tgagtgaccg cctccggcga
     1981 cccggtgggc ctctggtaac agagactcct accgtaagag gtcgccagag gc
//
LOCUS       DASQSL010001838         5404 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_162845, whole genome shotgun sequence.
ACCESSION   DASQSL010001838 DASQSL010000000
VERSION     DASQSL010001838.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 5404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5404
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162845"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(76..744)
                     /gene="grpE"
                     /locus_tag="VE844_18530"
     CDS             complement(76..744)
                     /gene="grpE"
                     /locus_tag="VE844_18530"
                     /inference="COORDINATES: protein motif:HMM:NF010738.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HZC03273.1"
                     /translation="MNGKEMPHEIGEHEIKEEEVELLEQRHEGAEAEQAAKDEGGEAA
                     VPTATEGGEAVDQAAVSGPSIEELSTALEQIQQKADGYWNDLLRARAEIDNVRKRTER
                     EVANAHKYGQERLILELLPVKDSLELGLAASDQPTSIEGLREGIELTLKMFSTVLEKT
                     GVAVIEPQGERFNPELHQAMTVQGSSEAEPGTVLMVVQKGYLLHDRVLRPAMVVVAKE
                     PSDA"
     gene            complement(837..1892)
                     /gene="hrcA"
                     /locus_tag="VE844_18535"
     CDS             complement(837..1892)
                     /gene="hrcA"
                     /locus_tag="VE844_18535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016353312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HZC03274.1"
                     /translation="MIDGSKSSLYTLSERAQYLFKVLVERYISEGQPVGSRTLARDAG
                     LDLSPATIRNVMADLEEMGLIRAPHTSAGRMPTVRGYRLFVDTLLTVKQPLSSEIQRI
                     WNNLGASRDTQSLIKRASTLLSEVTCLAGIVMLPRTEQQALTHVEFLPLSDKRVLVIL
                     VINTSEVQNRIIYTERDYTSAELQQAANYLNQAFRGRELSAVRDKLLNEMMVAREEVD
                     RMMQTAIEMAQQVFEPGETREDYVLAGQTNLMGIAEFDIDQLRQLFEAFNQKCDILRL
                     LDQALSAQGMQIFIGEESGYSFLDDCSVVTSTYQADGRVLGVLGVIGPTRMSYERVIP
                     IVDLTAKILGSALKSLH"
     gene            2036..2896
                     /locus_tag="VE844_18540"
     CDS             2036..2896
                     /locus_tag="VE844_18540"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014780754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HZC03275.1"
                     /translation="MFKRIGIVAKPGEVRIRELLKTLIDYVQRRCLDIAIDGNCALLL
                     NDTLLQPLKTPLTGQNCDLIISIGGDGTLLHAAHMIADYKVRLLGINVGHLGFLTDLS
                     PQEFTECLDAILAGHYLEENRMVLTSQVLREGTIIHQNDALNDVVIQKWNIARLITLD
                     TYINDTFVHSQRSDGIIVSTPTGSTAYALSGGGPILHPSLDAVILVPICPHTLSNRPL
                     VVAGNSRIEITVGTHEVDHARLTCDGEVRCELAPRDRVLVEKAKHSVHLIHPAAHDHF
                     ATLRAKLQWG"
     gene            complement(2903..3330)
                     /gene="fur"
                     /locus_tag="VE844_18545"
                     /pseudo
     CDS             complement(2903..3330)
                     /gene="fur"
                     /locus_tag="VE844_18545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007146274.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
     gene            3516..4214
                     /gene="bamE"
                     /locus_tag="VE844_18550"
     CDS             3516..4214
                     /gene="bamE"
                     /locus_tag="VE844_18550"
                     /inference="COORDINATES: protein motif:HMM:NF016258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HZC03276.1"
                     /translation="MKKLLRVLLALITGAAMSSGCSQGTLLAPSNLPLVYKIDVQQGN
                     VITQDMLAQLRPGMDKAKVLFIMGTPLVMDAFHQDRWDYIYTFQKGGDQREQQRATLY
                     FKQDRLVRIEGDVRSARSKIASVRHQEITVNVPGEVKPGLMSRLKDSIGLGDETTDDA
                     AIGRQEKRKVTEEKPAQGKTPPSDALEHAAEDKKTKEEQSFFSRVMEELERKQPGMDR
                     RSEVEPLEDSPLSP"
     gene            complement(4236..5351)
                     /locus_tag="VE844_18555"
     CDS             complement(4236..5351)
                     /locus_tag="VE844_18555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002808584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HZC03277.1"
                     /translation="MSGGGARAAYQIGFLRCLAHHYPDLPVAILSGVSAGAINAAYLA
                     AHQGSFLDKVETLAEVWAKLTTDQIFRVDMSSVAGNFTRWGMRLMMGKASRAIRGARS
                     LLDPAPLCALLERILKPNDGHLPGIMHNLDRDALRAVAVTASSYSIGQSVTWVQGRGI
                     TQWERAHRRSIPAGLGLYHILASASIPMFFPAVRIDKHWYGDGGILLTSPLSPAVQLG
                     ADRILAISTRSNRNSEGVALPTEEGEDYLPPAQVIGALVDALFLDVFDNDALRLERIN
                     ALVDCLPEDKRAGLRHIDLLVLRPSQDLGKLANEYAAELPNAFRFMTRGLGTQETRSN
                     DLLSLLMFQPDYLQRMLDLGYADAKAREDEIAAFLAK"
BASE COUNT         1287 a         1535 c         1341 g         1241 t
ORIGIN      
        1 ttaagagact ccactcaaat caacccatac ttgtatccac tgtgctttct caatattggg
       61 ccactttcat ggatttcaag cgtccgaggg ctccttcgcc acgactacca tcgcgggtct
      121 cagcacgcga tcatgcaata aatacccttt ctgcaccacc atcaagaccg tgcccggctc
      181 cgcctcgctg gatccctgca cggtcatggc ctgatgcaac tcgggattga accgctcgcc
      241 ttgcggctct attaccgcta ccccagtttt ttcgagcacg gtgctaaaca tcttcaacgt
      301 caactcgata ccttcgcgta gaccttcaat agaggtaggc tgatcggagg cggcgagccc
      361 taattccaaa ctatctttta ccggcagcag ttctaggata agccgttcct gtccatattt
      421 atgggcattg gccacctctc tctcggtacg tttgcgcaca ttatcgatct cagcccgcgc
      481 tcttagcaga tcattccaat agccatccgc cttctgctgg atctgttcca acgccgtgct
      541 caactcctca atagaaggcc ccgacacggc ggcttgatcg actgcctcac cgccttctgt
      601 cgccgtagga acagccgcct caccaccctc gtccttggcc gcttgctccg cctcggcgcc
      661 ctcgtgtctc tgctccaaca gctctacctc ctcttccttg atttcatgtt ccccgatctc
      721 atggggcatc tctttaccat tcacccgatc attcctccta atcacaaaga tcaatcgatt
      781 gccgaaccct gcctgctcgg acttcgagca cctatccaca tcggtacaat ggggatttaa
      841 tggagggatt tcaaggctga gccgagaatt ttagccgtca gatccacaat cgggatcacc
      901 cgctcatacg acatgcgggt cggcccaatg accccaagca cgcccaatac cctgccatcc
      961 gcctggtagg tcgaggtaac gacactgcaa tcatcgagaa agctgtagcc cgattcctca
     1021 ccaatgaata tctgcatccc ctgagcactc agtgcttggt ctaagaggcg caatatatcg
     1081 cacttttgat taaacgcctc aaatagctgt cgcagttgat cgatatcaaa ttcagcaatc
     1141 cccatgagat tggtttgacc cgcaagcaca tagtcttcac gggtctcgcc gggttcaaag
     1201 acctgttgcg ccatctcaat ggccgtttgc atcatccggt ccacctcttc ccgcgctacc
     1261 atcatttcgt ttaagagctt atcccggaca gcgctcaatt ctctccctct aaaagcctga
     1321 ttcaagtaat tggcggcttg ctgcaattca gcggacgtgt aatctcgctc ggtatagata
     1381 atacggtttt ggacctcgct ggtgttaatc accagtataa ccaacacccg tttatctgag
     1441 agcggcaaga actccacatg ggtcaaggct tgctgctcag tacggggaag catcactatc
     1501 ccggccagac acgtcacctc cgataatagc gtggaggctc tttttatcag gctttgagtg
     1561 tcgcgcgagg cgccgagatt attccagata cgctggatct cactcgaaag cggctgcttg
     1621 actgtcagta gcgtatcgac aaacagccgg tagcctctga ccgtcggcat acggcccgct
     1681 gaggtatggg gagcccgaat caatcccatc tcctcgagat cggccataac gttacggatg
     1741 gtggcaggac tgagatccaa accagcatcc cgtgctaagg tccgtgagcc gaccggctgg
     1801 ccttcactga tatagcgctc gaccagtacc ttgaataagt actgagcgcg ttccgataat
     1861 gtataaaggg aagacttgga cccgtctatc atagagtata tacagctaat ccatttgaga
     1921 ttgcgctaga tgatgaaatt tagcactcct gctctgaggg tgcaaaacac cggttggcga
     1981 tcagcccagg acatgctaac gttgacacct atggttcgac aacccttgtt tttgcatgtt
     2041 taaacgcatc ggtattgtag caaagccggg tgaggtaagg atccgggagt tactcaagac
     2101 gctcatcgat tatgtgcaaa gacgatgcct ggatatcgcc atcgatggca attgcgccct
     2161 actcctcaat gatactctac tccaacctct taaaacgccg ctaaccggcc aaaattgtga
     2221 tctcattatt tctatcggcg gcgatggcac cctgttgcat gcggcccata tgatcgccga
     2281 ctataaggta cggctgcttg ggatcaatgt cggccatctg ggttttctga ctgatctatc
     2341 cccgcaggag tttactgaat gtctggatgc gatcctcgcg ggccattacc tggaagaaaa
     2401 ccggatggtc ctcaccagtc aggtcctacg ggaaggcacg atcatccacc agaacgatgc
     2461 tttgaacgat gtcgtgatcc agaaatggaa catcgcgcgg ttgattaccc tggacaccta
     2521 tatcaatgac acctttgttc atagccagcg ttcagatggg atcatcgtat ctacgccgac
     2581 aggatctacc gcttatgcac tctcgggtgg cggtcctatt ctccaccctt cgctcgatgc
     2641 ggtgatcctg gttccgatct gtccccacac gctcagcaac cgtccactgg ttgtcgccgg
     2701 caatagccgc atcgagatca cggtggggac ccacgaggtc gaccatgcca ggcttacctg
     2761 tgacggcgaa gtccggtgcg aacttgcccc tcgcgaccgg gtcctggtgg agaaagctaa
     2821 acactcggta catctgattc atcctgccgc tcatgatcac tttgcgaccc tgcgtgctaa
     2881 actgcagtgg ggataattat gcttagatag ctcctgactc gcgtgcctgg caatcagcgc
     2941 agatcccata gatataaagc gcgtggtcgg tcattgaaaa gccgagatgc cgggcgatgc
     3001 tttgctgtcg atcctcgatg atctcatcga caaactcttc gacgcggccg cacctcacgc
     3061 acacaatatg atcatggtgg gtgccctgat tgagctcaaa tatcgaatgc ccccctcaaa
     3121 gtgatgccgc gtgactagac cggcgctctc aaattgtgtc aaaaccccat aaacggttgc
     3181 cagacctaca tcctcaccca cctccagcag ggctttatag acatcctctg cactgagatg
     3241 atggcggccg ctggtctcaa ggatctggag gatcctcaag cggggtagag tgactttaag
     3301 ccctgccttt cttagatctc gcgtctccac acatgctcca atttgatagc ccagagggat
     3361 tgcgttagat tcttcaatac tgtcagtata actctaaatt cacgacttaa tactgagttt
     3421 ccattatccg atctcttaaa tcaggtattt accatttaat agttttgttt aacaatagaa
     3481 gctaactgaa caggacataa cccttctgaa agcgaatgaa aaaacttctt agagtgttat
     3541 tggcgctcat caccggcgca gcaatgagca gtggttgctc tcagggtacc ctgctcgctc
     3601 catccaatct tccattggtt tataagatcg atgtgcagca gggcaatgtg atcacccaag
     3661 acatgctggc ccaattacgc cccggcatgg acaaggctaa ggtgctattc atcatgggga
     3721 cccctttagt tatggacgca ttccatcagg accgctggga ttacatctat acctttcaaa
     3781 agggtggtga tcagcgggag caacagcggg cgaccctata ctttaagcag gatcggctgg
     3841 ttaggatcga gggcgatgtt agatcggcgc ggagcaagat agccagcgtg cgacaccagg
     3901 aaattaccgt caatgtacct ggcgaagtca aacctggctt gatgagccga ttgaaagata
     3961 gcattggcct tggggacgaa actacagatg acgctgcaat cggccggcaa gaaaagagaa
     4021 aggtcacaga ggaaaaacca gctcagggaa aaacgcctcc atctgacgct ctagagcacg
     4081 ctgctgaaga taagaagact aaagaagagc agagtttctt ctctagggtt atggaagaat
     4141 tagaaagaaa gcagcccggt atggatcggc gatcggaggt tgagccgcta gaggatagcc
     4201 ctttatctcc ttaacggcaa tgagtgctcg cgttcttatt tggccaggaa cgccgcgatc
     4261 tcatcctcgc gcgccttggc atccgcatag cctagatcga gcattcgttg cagatagtct
     4321 ggttggaaca tcagcaggct taagagatca ttcgagcgcg tttcttgggt gccaagcccc
     4381 cgcgtcataa accggaaggc attcggcagt tctgccgcgt actcgttggc gagctttcca
     4441 aggtcctggg aaggccgcag caccagcaga tcgatatgac gcaacccagc gcgtttgtcc
     4501 tcgggtagac aatcgaccaa agcgttgatc cgctcaaggc gtagggcatc gttatcaaag
     4561 acatcgagaa acagcgcatc gaccagcgct ccgatcacct gggcgggcgg cagataatcc
     4621 tccccttctt cggtgggaag ggccacccct tcactattac gattagagcg cgtagagata
     4681 gcaagaatac ggtctgcccc aagctgcacg gcgggcgaaa ggggggaggt gagcaagatc
     4741 ccgccgtcgc cgtaccaatg cttgtcaatc cgtaccgcag ggaagaacat gggtatagag
     4801 gccgaggcga gaatatgata caagccaaga ccggcaggta tgctccttcg gtgagcccgt
     4861 tcccactggg tgataccccg tccctggacc caagtgacag attgaccgat ggagtagctc
     4921 gaggccgtga ctgccaccgc ccgcagagcg tctcggtcga ggttatgcat gatgccgggc
     4981 agatggccgt cattcggctt aagtatacgt tccaaaagcg cacagagcgg tgcagggtct
     5041 aacaagctac gcgccccgcg aatagcgcgc gaggccttac ccatcatcag ccgcataccc
     5101 cagcgggtga aattccccgc caccgaggac atatcgaccc ggaagatctg gtcggtagtg
     5161 agcttggccc aaacctcagc gagggtttca accttatcaa gaaagctgcc ttgatgggcc
     5221 gcgagatagg cggcgttaat agcccctgcc gagaccccgc ttaggatagc gacgggcaga
     5281 tccggataat ggtgggcaag acagcgcaaa aaaccgatct gataagcggc gcgtgcacca
     5341 cctccactca ttatgattgc taactcacct ctgcccggca tatcttcacc ttacttacac
     5401 ggct
//
LOCUS       DASQSL010001839         1368 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_149874, whole genome shotgun sequence.
ACCESSION   DASQSL010001839 DASQSL010000000
VERSION     DASQSL010001839.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1368
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149874"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..779
                     /gene="mltG"
                     /locus_tag="VE844_18560"
     CDS             <1..779
                     /gene="mltG"
                     /locus_tag="VE844_18560"
                     /inference="COORDINATES: protein motif:HMM:TIGR00247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HZC03278.1"
                     /translation="KAARVQAGEYAIKPGMTPRTFLAMLVEGRALQYALTLIEGWTFN
                     EVMAAIAAHPKLTHTLTGLKRGEIMQRLGIESDPEGLIFPDTYYFTPGTADIEILRRA
                     YRRMTKLLEHLWAVRDPELPYKTPYEALTMASLIEKETAVAAERPHIAGVFVRRLQQG
                     MHLQTDPTVIYALGDQFNGDLRRRDLELDHPYNTYRYPGLTPTPIAMPGEAAILAALH
                     PTKDDALYFVSKGDGTHHFSATLEQHNSAIVRYQLSVQAR"
     gene            776..>1368
                     /gene="tmk"
                     /locus_tag="VE844_18565"
     CDS             776..>1368
                     /gene="tmk"
                     /locus_tag="VE844_18565"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012700129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HZC03279.1"
                     /translation="MIGVHHPPRQRGIFITVEGIEGVGKSTQVKLIADYLRSRDQSVV
                     ETREPGGTVVGELIREVVLNKVPAKMAPTTELLLMFAARAEHLDKVIYPALAAGHCVV
                     SDRFTDASYAYQGAGRGIAQSRIAILEDYVQGSFRSDLTLLLDAPVDIALARANHRGI
                     VNRFEEDEDLQFFEAVRKAYLELARIYRDRFRVVDAT"
BASE COUNT          311 a          387 c          365 g          305 t
ORIGIN      
        1 ataaagctgc ccgggtccag gccggtgaat atgcgattaa accgggcatg accccgcgga
       61 cgtttctcgc tatgttggtt gaaggccgcg ctctacaata cgctttgacc cttatagagg
      121 gctggacctt taacgaggtc atggcagcga tcgcagcaca tccaaagctg actcatacac
      181 ttaccgggct taaacggggc gagatcatgc aacgcctggg aatagagagc gatcccgaag
      241 ggctgatatt cccggacacc tattatttca caccgggaac ggccgatatc gagatcctcc
      301 gccgagccta ccggcgtatg acaaagctac tggagcacct ctgggcagtg cgggatcccg
      361 agttacctta taaaaccccc tatgaagctt tgaccatggc ctccctcatt gaaaaggaga
      421 ccgccgtggc ggcagagcgg ccccatatcg ccggggtgtt tgttcgccgt ttgcaacaag
      481 gcatgcatct tcaaaccgat ccaacggtga tctatgccct cggtgaccaa ttcaatggcg
      541 atctgcgccg ccgcgatctc gagctagacc atccttataa cacctaccgt tatccggggc
      601 ttactccgac accgatcgcc atgcctggcg aggctgccat ccttgcggca ttgcatccga
      661 ccaaagacga cgccttatac tttgtctcga aaggtgatgg cactcaccac ttttccgcca
      721 ccctagaaca gcacaatagc gccatcgtgc gctatcaact gagcgtacaa gcaagatgat
      781 cggcgtacat cacccgcctc gccaacgcgg catctttatc actgttgaag gcattgaggg
      841 ggtgggcaaa agcactcaag taaagcttat cgccgactat ttacgcagcc gagatcagtc
      901 tgtggtcgag acccgtgaac ccggtgggac ggtggttggg gaattgatcc gcgaagtggt
      961 gctcaataag gtccctgcaa agatggcgcc caccaccgag ttattattga tgtttgcagc
     1021 gcgtgccgaa catttagata aggtcattta ccccgccctt gccgctggac actgcgtggt
     1081 ctctgatcgc tttaccgatg cgagttatgc ttatcaaggt gcaggacgcg ggatcgctca
     1141 atcccgcatc gcgatccttg aagactatgt ccaggggagt ttcaggtcag atttgaccct
     1201 attgcttgat gccccggtgg acatagcctt agcgcgcgcc aaccatcgtg gcatagtcaa
     1261 tcgattcgag gaggatgaag atcttcagtt tttcgaagcg gttcggaagg cttatcttga
     1321 actggccagg atttaccgcg accggttccg tgtggtggat gccaccca
//
LOCUS       DASQSL010001840         1163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_93122, whole genome shotgun sequence.
ACCESSION   DASQSL010001840 DASQSL010000000
VERSION     DASQSL010001840.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93122"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          253 a          285 c          388 g          237 t
ORIGIN      
        1 gggcaccctt gatgtccatg acgggcactg ggtgtggaga tccgccgtgg gtttggctcg
       61 atggtgccca cggagaatgc gctggctgtc tagcctggtg cgcacggatg gctgaggata
      121 agcagggtcc ccagagtgac cgagcaggac atcccctatc ttagcccact tggagtacga
      181 cgttgtcgtg tgcacggtat tgcgctgagg tggtggagat ggtgtgaacg gtgctggtgg
      241 ggccttgtgg ccctggcgca gtagcggcac tagggtgctt gatcaactct ggattactgc
      301 gccgtggtgc gcgacgaatc caccgaatgc cttggcctgg gcgctttctc catgcgcggc
      361 gctcagccag aggttaccgg ctacctcgtc agccagggct aggaaccgtc cagtaggtgc
      421 gaagcccaga ggtaggagga ttgatcgatg ccgtgcgtga tttcaaggta aggcaacggg
      481 ctaggtcgat gatacgaaaa tgacttagcg ggaccgttgc tggatgtatg aagaatgatc
      541 cgtaaacaac tacgcgaggt cgatcgaggc cttacgttac attgacatag ctaaggagcg
      601 ctagtgaaga taaaggatct tttggtcgcg gcagttatca ttgggattgc attgttgtta
      661 acgccccgtt ccgagaaggg cgtgccgcat gatgccggaa ctggcagtgt aagcgcgccg
      721 cggaagtctt ataattgcga atccgaccat tcggagaaat gcacttgggg gcagtaccgg
      781 cagatagctg aggaagattg cgctaagtat cgagcgcaag gtggagaatg caaaatagtt
      841 accgatggtc ggccaccgca tgcggtacgc attccgtccg ataacgaacg cgccgacatg
      901 cgtcgaaaaa tcgatgagga caccaaacgt ctatgcgaca agctcgataa tgctggatac
      961 gagtgccacg ctaagagcaa ctgacccagc atcatcgccc gagaagtatc ggcgccccgg
     1021 gcaagcctgc aggcacggtg gggggagggg gtgtggaccc ggggcaccgg cgtatcaatg
     1081 tgggttgcgc gtcatcgttg cggcatcacc gctagtttgg ctcgtcggcg tccgtgctaa
     1141 gcaagagaca cctcgtggag ctg
//
LOCUS       DASQSL010001841         1118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_107505, whole genome shotgun sequence.
ACCESSION   DASQSL010001841 DASQSL010000000
VERSION     DASQSL010001841.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1118
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107505"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..880
                     /locus_tag="VE844_18570"
     rRNA            <1..880
                     /locus_tag="VE844_18570"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            941..>1118
                     /locus_tag="VE844_18575"
     CDS             941..>1118
                     /locus_tag="VE844_18575"
                     /inference="COORDINATES: protein motif:HMM:NF013154.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LAGLIDADG family homing endonuclease"
                     /protein_id="HZC03280.1"
                     /translation="MNSDNPTGAENQQERLVTIGWVVGFVDGEGCFSCSIYRNHKMTL
                     NWQVRAAFDVVQGGS"
BASE COUNT          267 a          280 c          364 g          207 t
ORIGIN      
        1 gtcgctgtga agctttgtcg taaggcgggg tggagcaact acaagtgcga atgccggcat
       61 gagtagcgag atcgaagcga gaaacttcga cgccgtaagt ccaaggtttc ctggggaagg
      121 ttaatccgcc cagggtaagt cgggacctaa gccgaggccg agaggcgtag gcgatggaca
      181 actggttgat attccagtac caccacatgc gcgcccactc caagatgggt tgctaaggaa
      241 agccccttcg ggggcctacc gacccaccca tggcggagag caatggggtg acggaggagg
      301 gtagtcagac ccacgcgatg gtcgacgtgg ggtaagcagg tagggaggag ccctaggcaa
      361 atccggggct ccgtcaatcc cgagatgcga tgccgatccg cttgaggaga agccgataaa
      421 cctatgcttc ctagaaaagc ctctagcgag ctcgtgtggt gcccgtaccc caaaccgacg
      481 caggtggaca ggtagagcat accgaggaga tcgagtgaac cctggttaag gaactcggca
      541 aattggccgc gtaacttcgg gataagcggc gcctcgcttg gtgaagggac ttgctcccgg
      601 agctgagcgg ggtcgcagaa accaggccca agcgactgtt tactaaaaac acaggtgcgt
      661 gctaagccgt aaggcgccgt atacgcactg acgcctgccc ggtgccggaa ggttaagggg
      721 aagggttagc tgggacttta agtcccagcg aagctctgaa cctaagcccc ggtaaacggc
      781 ggtcgtaact ataacgatcc taaggtagga agccctggtt agcgcagcca gggtctgccc
      841 ctcacgacag cgatggcgtg agtgcagttg gctaaatgct ggaacgcccg tgtatccggc
      901 ggtactcgtt cgtgtcgtac ctcggtggtt gagtggcgac atgaacagtg acaatccgac
      961 cggtgcggaa aatcagcagg aaagactcgt cactatcgga tgggtcgtgg gtttcgtcga
     1021 tggagaaggc tgtttcagct gctccatcta tcggaatcac aagatgactc ttaactggca
     1081 ggtcagagca gcatttgacg ttgtccaggg agggtcaa
//
LOCUS       DASQSL010001842         1247 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_149879, whole genome shotgun sequence.
ACCESSION   DASQSL010001842 DASQSL010000000
VERSION     DASQSL010001842.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1247)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1247)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1247
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149879"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1114
                     /gene="groEL"
                     /locus_tag="VE844_18580"
     CDS             <1..1114
                     /gene="groEL"
                     /locus_tag="VE844_18580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015922249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HZC03281.1"
                     /translation="KDGVITVEESKGLSDEIEYVEGMEFDRGYISPYFITNADRMEAV
                     IEDASIIITDKKVSAVADLLPALEKLLQTGKKDVVIIAEDVDGEALATLVVNKLRGTL
                     NVLAVKAPGFGDRRKAMLEDIAILTGGTVISEETGRKLDSAMLEDFGQARRVRATKDD
                     TTIVEGHGSESAIQARINQIKTQIEETTSDYDREKLQERMAKLSGGVAVIKVGAATEI
                     ELKERKARVEDALSATRSAVEEGIVPGGGVALVRAQRALSNVSGLTEDEAVGVNIIRR
                     ALEQPLKLIVENAGYEGAVVLNQVKQQADDYGYDADVGEFGPMLERGIVDPTKVTRSA
                     LQNAASVAAMVLTTESMITEIPEEKPAAPAMPPMDY"
BASE COUNT          289 a          339 c          403 g          216 t
ORIGIN      
        1 caaggacggc gtaattacgg tagaggagtc caaaggcctc tctgacgaga ttgaatacgt
       61 agaaggtatg gagttcgacc ggggctacat ctccccctac ttcattacca acgctgaccg
      121 gatggaggcg gtaattgagg acgccagcat tatcatcact gacaagaagg tgtctgcggt
      181 ggcggacctg ctgcccgccc tggaaaagct gctccagacc ggcaagaagg atgtagtcat
      241 catcgctgag gatgtagatg gggaggccct ggcgaccctg gtggtgaaca agctgcgggg
      301 gacgctaaac gttctggcgg tgaaagcccc tgggtttggt gaccgacgca aggctatgct
      361 ggaggacatt gccattctca ccggcggcac cgtcatcagc gaggagacgg gaaggaagct
      421 ggactcggca atgctagaag actttgggca ggctcgccgg gtcagggcca ccaaagacga
      481 caccaccatt gtggaaggtc acggctctga gtcagccatc caggctcgca tcaaccagat
      541 caagacccag atcgaagaga ccacttcgga ttacgaccgg gagaagctgc aggagcggat
      601 ggcgaagctc tctggcggtg tggccgtaat taaagtgggc gctgccacgg agatcgaact
      661 gaaggagcgc aaggctcggg ttgaggacgc cctctccgcc actcgatctg cggtggaaga
      721 gggtattgtt cccggcggcg gagtggccct ggtccgcgct cagcgcgccc tgagtaatgt
      781 cagcggcttg accgaagatg aggcagtagg cgtcaacatc atccgtaggg ccctggagca
      841 gcccctgaag ctgatcgtgg agaacgctgg ttacgaagga gccgtggtgt tgaaccaggt
      901 gaagcagcag gccgacgact acggctacga tgccgatgtt ggtgagttcg gccccatgct
      961 ggagcgaggc attgtagacc cgaccaaggt tacccgctct gccctacaaa atgccgccag
     1021 cgtggcggcc atggtgctga ccactgagtc catgataacc gaaatccctg aagagaagcc
     1081 agcagctccg gccatgcccc ccatggacta ctagtagact ggccactccg taggggcggg
     1141 tctgaaatcc gtccccacgg agtggccaac cttcggatcc cctctcccgc acagaggaga
     1201 agagccgggg gtgagggcat ttaccctatc aggagaagtc aaaaatg
//
LOCUS       DASQSL010001843         1068 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_137194, whole genome shotgun sequence.
ACCESSION   DASQSL010001843 DASQSL010000000
VERSION     DASQSL010001843.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137194"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(598..>1068)
                     /locus_tag="VE844_18585"
     CDS             complement(598..>1068)
                     /locus_tag="VE844_18585"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZC03282.1"
                     /translation="FRGINALIPVGRRTLRMASVLPRTILWTLQPVFSLSEDESITAL
                     HLAQQLRSLGYQVVALAHSGLRAIEHALAHRPHAVLMDIHLQGTMDGIDAARHIQAAT
                     PIPVVYMGAHADAATIKRLQATTQAAGFMPKPIHLPTLHATLQRACSRPQGDLS"
BASE COUNT          227 a          290 c          333 g          218 t
ORIGIN      
        1 tccggtgcat aacaggggaa tccgatcatg gctgactacc aattttccgc acattccatc
       61 ggatttagtg gtagaccaat gggtctcgaa aattgagagc agctcacctc atgatatccc
      121 gttcctacac gacctgtgga cgacgtttcg tcacctgctg tggtctcaca taatctcacc
      181 aatatcaata gcttggggtt ttaccactaa atccggggga atctggaaaa ttccagatcg
      241 ggtggaaggg acttgtccct ttcgctcgtg gcgttctgag gcgttctctg cttgagagga
      301 gtctgcaacg gccgcatccg actggggtct gtgcaaggat tgcggatggt ggcagattga
      361 tccaggggcc aatgtcgcgg acactacgat gggcctctgc accgaagaag cactccagcc
      421 attccgtctg cgcgtctcgg gtaatagcgg ctgtaatcac tatacgcctg gcgagccggc
      481 ccgggccgcg gggtcaagtg cggcccctcc gactgcggag ccgcaacgct gaagcggtga
      541 acagacgtca catagtggga aaggcgaacg gacgggaacc tccacgaggc gatttagcta
      601 tgaaagatca ccttgtggac gggagcacgc acgctgcagg gtggcgtgca gggtcggcag
      661 atggatcggt ttcggcataa atcctgcggc ctgcgtggtg gcctggaggc gcttgatggt
      721 cgccgcatcc gcgtgggcac ccatgtagac gaccgggatc ggcgtggcgg cttgaatgtg
      781 cctcgccgca tcaatgccgt ccatggtccc ttgtaaatgg atgtccatga gcaccgcgtg
      841 cgggcggtgg gcgagggcgt gttcaatcgc ccgaaggccg ctgtgggcca gagccacgac
      901 ctgataccca aggctgcgaa gctgttgagc caagtgtaac gccgtaatcg attcatcctc
      961 agacaatgag aatacgggct ggagggtcca tagtatcgtc ctcggaagca cactcgccat
     1021 ccgaagtgtt cgacggccaa ccgggataag cgcattgatg ccacgaaa
//
LOCUS       DASQSL010001844         1360 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_137200, whole genome shotgun sequence.
ACCESSION   DASQSL010001844 DASQSL010000000
VERSION     DASQSL010001844.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1360
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137200"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            307..1317
                     /locus_tag="VE844_18590"
     CDS             307..1317
                     /locus_tag="VE844_18590"
                     /inference="COORDINATES: protein motif:HMM:NF033547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HZC03283.1"
                     /translation="MPIVSYLHQLFNTETCQAYIHTLRWKDRPLQCPRCQSLNVGPWG
                     TYHAQPGLKRYRCKEKGCKRTFNDLTGTLLDGSKRSVMHWILATFLLCLACSSCRIAR
                     ELGVHIRTGYRWCWWLRNAALSYEMARQLDGTVEADELYHTAGHKGQAKTGGKKALGR
                     RARGRRKKREPGRGHDDKDRPAIIAWVSRQGGVVIQATRDFTVKTVQKAADLAMQAGS
                     KLYTDSASSYRLITGYEHDSVNHTKKEYARGDVHENRAECLFSLLKPYLRVFRGISKT
                     NLPGYVGFFQFLRNFHQLTAFEQAELILHTALDPSVASKARKGDFVRCLDHFELLQSP
                     IN"
BASE COUNT          307 a          387 c          377 g          289 t
ORIGIN      
        1 acgccacgtc gtagactttt catacacgct gttgagggac accacccaat tttcatgcca
       61 tctctagggt gccatgatcg tggcctaatg ccaagcctga caattagtac cctcggttcg
      121 gccatttctg taagtccttt gtattcaatg aactccacag gggcagaggc caatttttca
      181 aagcctctat ctaatgattt ccgctcaatt tatcgcggtt tgtagcggcc taaaaacctc
      241 aatcataaac tgagaatctc cgatctcgtt cttaaccgaa cccgtgatca taggagacac
      301 tcagtcatgc cgatcgtttc atatctgcac caacttttca acaccgaaac gtgtcaagcc
      361 tacatccaca ccttgcgctg gaaagatcgc cccctacagt gtccccgctg tcagagcctc
      421 aacgtcggac cgtggggcac gtaccacgct cagccaggcc tcaaacgcta ccgctgtaaa
      481 gagaagggct gtaagcgcac cttcaatgac ctcaccggca cgctattgga tggcagcaag
      541 cgctcggtca tgcactggat tctcgccacc tttctgttgt gcctggcgtg ttcgtcttgt
      601 cgcattgcca gggagctggg cgtccatatc cggaccgggt atcggtggtg ttggtggctg
      661 cgcaacgccg ccctgtccta tgagatggcg cgtcagctgg acgggacggt ggaagccgat
      721 gagctctatc acaccgccgg ccataaggga caagctaaga cgggtggcaa gaaggccttg
      781 ggccgtcgag cgcgtggccg ccgcaagaaa cgcgagcccg ggcggggcca tgatgacaaa
      841 gaccgtcccg cgatcatcgc ttgggtgagc cgtcaaggtg gcgtcgtgat ccaagcgaca
      901 cgggacttta cggtcaagac ggtgcagaag gctgctgacc tcgccatgca agccggcagc
      961 aagctctaca cggactcggc cagcagctac cggttgatca cgggctatga gcatgactcg
     1021 gtgaaccaca cgaagaagga atacgcgcgg ggggacgtgc atgaaaatcg ggcggagtgt
     1081 ctcttttcgt tactgaagcc ctatctgcga gtgtttcgag ggatcagcaa aaccaacctg
     1141 ccgggctatg tgggcttctt tcaattcctg cgcaacttcc atcagctgac cgcgtttgag
     1201 caggccgagc tgatcttgca cacggcgtta gacccgagcg ttgccagcaa ggccagaaag
     1261 ggcgatttcg tcagatgttt ggaccacttc gagctgctac aaagcccgat aaattgagcg
     1321 aagaaagtaa gcgttgcccg tgcccagggc tggcagtgta
//
LOCUS       DASQSL010001845         2002 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_162878, whole genome shotgun sequence.
ACCESSION   DASQSL010001845 DASQSL010000000
VERSION     DASQSL010001845.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2002
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162878"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(118..492)
                     /locus_tag="VE844_18595"
     CDS             complement(118..492)
                     /locus_tag="VE844_18595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03284.1"
                     /translation="MGIPKTIEPISPKPTPEEILSILNEAHLNRKRTPHQVQLACACG
                     YSRPVVESPIASLLTRGAGAIRYKGPQGAVVQLGMTVMAHNGASLMRIRQQRLSKRGQ
                     KFRRLLGLRSPNRNQINGPKNC"
     gene            complement(625..1062)
                     /locus_tag="VE844_18600"
     CDS             complement(625..1062)
                     /locus_tag="VE844_18600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03285.1"
                     /translation="MRGFGRQCRGQGNVFVKLVRQTERQLLEAGSSIVQLATDAQQHL
                     QQAPQGSAAVGERLVRDLSQALQAHHQIAKQSRQLTQGKRLLQCKIVNAYDPTMAPSI
                     KGKSNCPAQFGRKPGILSEPTAGFIFALHAPVGNPSDASYVVP"
     gene            complement(1104..1703)
                     /locus_tag="VE844_18605"
     CDS             complement(1104..1703)
                     /locus_tag="VE844_18605"
                     /inference="COORDINATES: protein motif:HMM:NF017416.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03286.1"
                     /translation="MRLLRYLQHWLSGQGPRLQVVDFVPETHPIRQWADTFPWAALVE
                     AVDKSVAERFPKPSNRGRRPVATRVLLALELLKHEVSASDEQICHRLRTDFAVMYACG
                     ITEVQADRRPAHFVLPQTLAHFRSRIDEALMDELIAIQAAAAMDEGLVSPAHLLVDTF
                     PTEQGSQRVNDANTLYRAQKKSSNSSATSLSSASPRRQS"
BASE COUNT          429 a          511 c          622 g          440 t
ORIGIN      
        1 agaagcggtt catccccaca cccgtgggga acactcttac ggaagttatt cactactcga
       61 caagtccggt tcatccccac acccgtgggg aacactgccc tgcataatat atagtgatca
      121 acaatttttt ggaccattga tttgattcct gttaggggat cttaggccaa gcaatcgtcg
      181 gaacttttgt ccgcgtttcg aaaggcgctg ctgacggatt cgcatcaacg aggcgccgtt
      241 atgggccatg accgtcatac ccagttgtac gaccgcccct tgagggcctt tatagcgaat
      301 cgctccggca ccgcgagtga gcaagctggc aatagggctt tcgactaccg gacggctgta
      361 accgcaggca caagccaact gcacctgatg aggcgtgcgt ttgcggttca ggtgggcttc
      421 attgaggatc gagagaatct cttcgggcgt gggcttgggt gagattggct cgatggtctt
      481 agggatgccc acggtgagaa ttccccgctc atggagcgtt tggcgcaggt cggcatcatt
      541 gacaccgaga tcaccggcca gtgaatagat cgtgggcggc ttgggttgcg tgaggcgttg
      601 gcgggcgaga tggactttat cgagtcaggg caccacatag ctggcatcac tgggattgcc
      661 cacgggggcg tggagagcaa agataaagcc ggcggtgggc tccgagagga taccgggctt
      721 gcgcccaaac tgggcggggc aattgctctt gcctttgatg ctcggggcca tggtgggatc
      781 gtaagcattg acgattttgc actgaagcaa gcgtttgcct tgggtcagct gccgcgattg
      841 tttggcgatc tggtgatggg cttgcagggc ttggctcaag tcacggacaa ggcgttcacc
      901 gacagcggcg ctcccttggg gagcttgctg aagatgctgc tgggcgtcgg tggcgagttg
      961 aacaatggag ctgcccgcct ccaacagctg ccgttcggtc tggcgcacca gcttgacaaa
     1021 gacgttgccc tgtccccggc attggcgtcc aaagccgcgc atgatcttgt gtaaggtgtg
     1081 ttgaagctcg gtggcttgcg tcttcagctt tgtcggcggg gtgatgcact gctcaaggag
     1141 gtggcagacg agttggagga ctttttttga gcccggtaaa gcgtgttggc gtcgttaacc
     1201 cgttggctgc cctgctcggt ggggaaggta tcgaccaaaa gatgagccgg gctgacgagc
     1261 ccctcgtcca tggccgcagc ggcttggatg gcgatcaatt catccatcag cgcttcgtca
     1321 atgcggctac gaaagtgggc caaggtttgg ggcaggacaa aatgggctgg acggcggtcc
     1381 gcttgcacct ccgtgatgcc acaggcatac atgacggcga aatcggtgcg taagcggtgg
     1441 cagatttgtt cgtctgaggc gctcacctca tgtttgagca actccagagc cagcaacact
     1501 cgagttgcca ccggtcgacg accccggttg gagggtttag gaaagcgctc ggccacgctc
     1561 ttgtcaaccg cctcaactaa ggcggcccag ggaaaagtat cagcccactg gcgaatcgga
     1621 tgggtttcgg gaacaaagtc caccacctgt agacgaggac cttgtccgct caaccaatgc
     1681 tgaagataac gcaacagacg catcgttggc tctcctgatc aggggggaat ggaaggcctt
     1741 aggatacgcc ggtcgattcc ggatcacaac cccgcgatgg agggatgaat aaattggtga
     1801 ccactaagga atgaaaattt aataacacca cccagcgccc ttaaaacctg agaggcagag
     1861 cacataacaa gtatcgcaga cgatatacag tgtgagcctg ttctcgcaag catttgggga
     1921 cattattgtg tactcattcc taagcctctg gtcgaaacgg ctgaggagtt gggaaatctt
     1981 ttggtcgtag tcgctcaaag tc
//
LOCUS       DASQSL010001846         1302 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_149902, whole genome shotgun sequence.
ACCESSION   DASQSL010001846 DASQSL010000000
VERSION     DASQSL010001846.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1302
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149902"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1302
                     /locus_tag="VE844_18610"
     CDS             <1..>1302
                     /locus_tag="VE844_18610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03287.1"
                     /translation="FAWLVSPVFHGLVMALYVNWPFFLIVVGGTVLGAYLWNTGDKDP
                     AKIVAVVAAIAALAYLFASAPLRELRYLDSIEAEEIKQMPDTTGLRFLPYDVAARFGL
                     NTQDEPTLMLGDFEPLTNGEGGIDWVAPREPNGLYNSFVNNQDGVMVIQPDGSAETIR
                     QEFKRGEGMALYRNVGWKLKREKFFAHHTNQYYVLDREELLGVVPYITYRFSFPVMVP
                     KWGGVLVVHPDGEIENLSPQEAIQDGRFEGERLYPEQLARKVGDVWKYRNGYWNTWFA
                     HEDEAQIPQINTPEDQNAATLEGTSTNQMPFLIPTEEGPQWFLAAEPYGRSFSMYQGI
                     YVDGHSGEVTYFKPDTGSALIGVNKALDYAQATFPNYQWGQNAVILEPRPIVTDETLY
                     WMATITNADKAGVNQTVMVNASEQGEVTVLETYEDVVAFVEG"
BASE COUNT          307 a          365 c          370 g          260 t
ORIGIN      
        1 cttcgcgtgg ctggtgtctc cggtcttcca cggcctggtg atggcattgt atgtaaactg
       61 gcctttcttc cttatcgtag tgggcggtac ggttctcggt gcttaccttt ggaacacagg
      121 agataaggac cccgccaaga tagtggcagt agttgccgcc atcgcggcct tagcctatct
      181 attcgcctcg gcgcctctac gggaactacg ctacctagac tccatagaag ctgaagagat
      241 caagcagatg cccgacacaa cggggctaag gtttctcccc tacgatgtgg ctgcgcgttt
      301 cgggctcaat acccaggacg aacctaccct gatgcttggg gatttcgaac ccttaactaa
      361 cggcgagggt gggatagatt gggtggcccc aagagaaccc aacggtctct acaactcctt
      421 tgtcaacaat caggatgggg tcatggtcat ccagcccgat gggtcggccg agaccataag
      481 gcaggaattc aagcggggcg agggcatggc cctttacagg aacgtcggct ggaagctcaa
      541 gagagagaag ttcttcgccc accacacgaa ccagtactac gttctcgaca gagaagagct
      601 actcggggta gtaccgtata taacctacag gttctctttc ccggtgatgg tccctaagtg
      661 gggtggagtt ttggtcgttc accccgatgg agagatagag aacctctctc cccaggaagc
      721 catacaggat gggcgcttcg aaggagagcg gctctatccc gagcagttgg cgaggaaagt
      781 gggcgacgtc tggaagtacc gtaacggcta ctggaatact tggtttgccc acgaggacga
      841 agcccaaatc ccccagataa atacacccga ggaccaaaac gctgctaccc ttgagggaac
      901 ctcgaccaac caaatgccct tcctcatccc cacagaagaa ggaccccagt ggttcttggc
      961 cgccgagccc tacggcagga gtttctcgat gtaccagggg atctacgtcg atggccacag
     1021 cggcgaggtc acctacttca aacccgacac gggcagcgcc ttgatcgggg tcaacaaggc
     1081 cttggattat gctcaggcta ccttccccaa ctaccagtgg ggccagaatg cggtcatact
     1141 cgaaccaagg ccgatagtca cagacgagac cctctactgg atggccacca tcaccaacgc
     1201 cgacaaagcg ggggtcaacc agactgtcat ggtcaacgct tcagaacagg gggaggtaac
     1261 ggttctggag acctacgagg acgtggtggc cttcgttgag gg
//
LOCUS       DASQSL010001847         1051 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_118315, whole genome shotgun sequence.
ACCESSION   DASQSL010001847 DASQSL010000000
VERSION     DASQSL010001847.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118315"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1051)
                     /locus_tag="VE844_18615"
     rRNA            complement(<1..>1051)
                     /locus_tag="VE844_18615"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          215 a          347 c          254 g          235 t
ORIGIN      
        1 gccaccggct tcgggtgtta ccgactttca tgacttgacg ggcggtgtgt acaaggcccg
       61 ggaacgtatt caccgcagcg ttgctgatct gcgattacta gcgactccga cttcatgggg
      121 tcgagttgca gaccccaatc cgaactgaga ccggcttttt gggattagct ccacctcaca
      181 gtatcgcaac cctttgtacc ggccattgta gcatgcgtga agcccaagac ataaggggca
      241 tgatgatttg acgtcgtccc caccttcctc cgagttgacc ccggcagtct cccatgagtc
      301 cccgccatta cgcgctggca acatgggaca agggttgcgc tcgttgcggg acttaaccca
      361 acatctcacg acacgagctg acgacaacca tgcaccacct gtgaaccggc cccaaaagga
      421 gaaaccacat ctctgcggcg gtccggtcca tgtcaagcct tggtaaggtt cttcgcgttg
      481 catcgaatta atccgcatgc tccgccgctt gtgcgggccc ccgtcaattc ctttgagttt
      541 tagccttgcg gccgtactcc ccaggcgggg cacttaatgc gttagctgcg gcacggagaa
      601 cgtggaatgt cccccacacc tagtgcccaa cgtttacggc atggactacc agggtatcta
      661 atcctgttcg ctccccatgc tttcgctcct cagcgtcagt taatgcccag agacctgcct
      721 tcgccatcgg tgttcctcct gatatctgcg cattccaccg ctacaccagg aattccagat
      781 ccccctacca gactcaagcc gcccagtatc gaatgccatt ccaaggttga gccttgggat
      841 ttcacacccg actaaacggg ccgcctacgc gccctttacg cccaataatt ccgaataacg
      901 ctagccccct ccgtattacc gcggctgctg gcacggagtt agccggggct tcctttagcg
      961 gtaccgtcaa acctcgaggc tattcacccc gaagcaattc ttcccgctcg acaggagttt
     1021 acgacccgaa gatcttcatc ctccacgcgg c
//
LOCUS       DASQSL010001848         1083 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_80643, whole genome shotgun sequence.
ACCESSION   DASQSL010001848 DASQSL010000000
VERSION     DASQSL010001848.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80643"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..340)
                     /locus_tag="VE844_18620"
     CDS             complement(<1..340)
                     /locus_tag="VE844_18620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011735389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03288.1"
                     /translation="MASPFIPIDRNCPIELPASVEGWLREDHLARFVVDVVEQLDLSA
                     IEQAYSGRGSPAYPPKLMVALLFYGYATGAFPSRKLERATYESVPFIYIAGGLHPDHD
                     SINSFRNGFLV"
     gene            431..>1083
                     /locus_tag="VE844_18625"
     CDS             431..>1083
                     /locus_tag="VE844_18625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03289.1"
                     /translation="MPKLLQVFIIVFVLFSTSCASRILHLKEQSQLYAELKHDRLLLQ
                     KFRQCSLRPYGEPAAAAEAEAMPESVSPPPSAVPVDAVMNKNPAIKNDEDASNLLGLI
                     RDMADPDRDEIDFTPHLNRLKRIVELGQRLHNRIRLDEDKLSRQGSQFERLLIAYNRA
                     YFGNIQFKVDSPARDAVKGVIKTTSTGFVDRNGNAFIFPGLSAALEVGPGRTIYLQSG
                     "
BASE COUNT          268 a          315 c          270 g          230 t
ORIGIN      
        1 gcaccaggaa cccgttgcgg aaactgttga tgctgtcgtg atccgggtgc aggcccccag
       61 caatatatat gaacggcacc gactcatagg tcgcccgctc cagtttgcga ctgggaaacg
      121 cccccgtggc ataaccgtaa aatagcaatg ctaccatcag cttcggcgga tacgccggcg
      181 aaccgcggcc actataggct tgctcgatcg cacttaaatc caactgttcg actacatcca
      241 caacaaaccg cgctagatgg tcttccctta accacccttc cactgaggcc ggcagttcaa
      301 tcgggcaatt cctgtctatc gggataaagg gtgacgccat gatcactgct ccagtatgaa
      361 aacaactcag gcctatatat taccgcgtgc cgaagcaagt ccgacagact cctagctgag
      421 gggaatgaac atgccgaaac tgctacaggt attcataata gttttcgtgt tgttttcaac
      481 aagctgtgct tcaaggatcc tgcatctcaa agagcaatcc caattgtatg ccgagcttaa
      541 acacgacagg cttctcctgc agaagttccg gcagtgttct cttcgccctt acggtgaacc
      601 ggcagcggcg gccgaagctg aagcgatgcc tgaatcggtt tccccgcctc cgagcgccgt
      661 ccccgtggac gctgtcatga acaaaaatcc ggctattaaa aacgatgaag atgcctcaaa
      721 ccttctcggc ttgattcggg atatggccga cccggaccgt gatgagatcg acttcacacc
      781 tcacctgaat cggctcaaac gcatcgtgga actcgggcag aggttgcaca accgcattcg
      841 gctggatgaa gacaagctga gccgccaggg atcacagttt gagagacttc tcatcgctta
      901 taaccgcgcc tacttcggaa acatccaatt caaagtggat tctcccgcaa gagacgcggt
      961 gaagggtgtc attaaaacca cctcgacggg gttcgtggat cggaacggca atgccttcat
     1021 cttccccggc ctctccgcgg cactggaagt ggggcccggc agaaccatct atttacaatc
     1081 ggg
//
LOCUS       DASQSL010001849         1113 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_137231, whole genome shotgun sequence.
ACCESSION   DASQSL010001849 DASQSL010000000
VERSION     DASQSL010001849.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137231"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..414
                     /locus_tag="VE844_18630"
     CDS             <1..414
                     /locus_tag="VE844_18630"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZC03290.1"
                     /translation="RSFAEIPLFLAAADVTVVSRPQCPGVPIKLLNYMAAGKPIVVFE
                     GSAKGLQHLHHALVVPDHDWRALGYGILTLIQDPASAARLGRNARQWADEQFSWGTIV
                     GQIEQVYYELIEPGARTTSPQPVAIARTARPREHV"
     gene            451..1041
                     /locus_tag="VE844_18635"
     CDS             451..1041
                     /locus_tag="VE844_18635"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HZC03291.1"
                     /translation="MAQSQGAKQPKVLIIGLDGATFELIKPWVATGQLPTFKQLLHEG
                     TQAELESTIPPITPPAWTSFMTGMNPGKHGLFNFTEYHPQNHSIRYANASNRKVSSIW
                     NLLSALDWSVGVINVPMTYPPERVRGFCISGLDTPDKDSEFVYPKWLKKEIERDIGEI
                     YLDLRHLGYMKTDDKRDKVLLTRTYRAKARHLGSTP"
BASE COUNT          257 a          326 c          314 g          216 t
ORIGIN      
        1 cggtcctttg ccgagattcc gctcttcctg gccgccgcag atgtgaccgt cgtcagccgc
       61 ccgcagtgcc cgggtgtgcc catcaagctc ctcaactata tggcagcggg gaagccgatc
      121 gtggtgttcg aaggctcggc gaaaggttta cagcatctgc accatgccct ggtggtaccg
      181 gaccatgact ggcgggcgtt aggctacggc atcctgacgc tcatccaaga cccggcctcc
      241 gccgcacgct tggggcggaa tgcgcggcag tgggcggacg aacagttctc ctgggggacc
      301 atcgtgggcc agatcgaaca ggtctactat gagctgatcg aacccggcgc ccgcaccaca
      361 tcgccccaac ccgtggcgat cgccaggaca gctcgaccgc gtgaacacgt ctaaacgacc
      421 ccaaccctcc acgaaaaagg tgcgtgtact atggcgcagt cacagggagc gaagcaaccc
      481 aaggtgctca tcatcggctt ggacggggcg accttcgagc tgattaaacc ctgggtggcc
      541 acaggtcagc tgccgacatt taaacagctc ttgcacgaag gcactcaggc cgaattagaa
      601 tcgacgatcc cgcccataac ccctcccgct tggacctcgt tcatgaccgg gatgaaccca
      661 gggaaacatg gcctattcaa tttcacggag taccaccccc agaatcattc tatacgctat
      721 gcgaacgcct caaaccgtaa ggtttctagc atttggaatt tactcagcgc gctcgactgg
      781 agcgttggcg taattaacgt gcccatgacc tacccacccg aaagggttag ggggttttgt
      841 atctcgggat tggatacccc agacaaggat tcagaattcg tctacccgaa atggcttaag
      901 aaggagatag agcgggatat tggggagatt tatctcgatc ttaggcacct cggatacatg
      961 aaaacggatg ataagcgtga caaggtatta ctgacccgta catacagagc taaagcccgg
     1021 caccttggaa gcaccccttg agaatgcgtg gttttcggcg gacccgcttg acggcatcgc
     1081 gcagttcacg ccggagatgg gggagattga cgc
//
LOCUS       DASQSL010001850         3064 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_107577, whole genome shotgun sequence.
ACCESSION   DASQSL010001850 DASQSL010000000
VERSION     DASQSL010001850.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3064
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107577"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            65..>3064
                     /locus_tag="VE844_18640"
     CDS             65..>3064
                     /locus_tag="VE844_18640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001055730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3 family transposase"
                     /protein_id="HZC03292.1"
                     /translation="MAERRVGKKNMLVRKITTIQERLPILGNDEIEALYGRPRFTHEE
                     RMEYFTLSPTEKAALEQLHSIKSQVCFILQLGYFKARHLFFTFTFQEVKEDAKYIQEH
                     YFPDVQIADVAIAKVTRLKQQRLIRALFNYRHCDARKRQTLAVKAQQAARVCGKPVYV
                     FRDLLHYLQESCIVLPSYRFMQETVSRALGEEQNRLITLMRDHLTPPDIEALRHLLAD
                     SPGLYEVTQLKREPRDFSAGEIKREIRRGEQIQPLYRLVQRLLPRLQISNEGIKYYAS
                     LVGYYSVYKLKRLNQWMVYVYLLCFVYHRTQRFHDNLINSLLYNVRRYGDEAKAAAKE
                     KVYECHIESHQNLKKAGRVLKLFTDDSIAASTPFQDVQATAFAILERHKLAVIADQIA
                     TSAKFDETTFQWGHVDELARQFKRHLRPILLAVDFAASRTRDPLIEAVDFLKAAFRQG
                     RPLGHYSPATLPSRVIPESMKRYLYAQATGKLKRLLVDRYEFWVYRLLRNGLESGDIF
                     CRDSVRFRSFEDDLLDDQRWQQKDKLIDEAGLIILKQSIQAHLAELGELLEARIAEVN
                     RRIASGKNEHLQIKKRGPYSRWTLEYPRGTEPVNHPFFDALKQVAIGSILHFVNQHCR
                     FIDAFDHVLGRYAKQGADDRMIVACLIAWGTNLGLGRMGEISDIGYTLLAATSDNFIR
                     LETLKEANDRISNGIAELPIFRHYDLDEALHSSSDGQKFETRIPTLNARHSPKYFGLK
                     KGVVSYTLVANHVPVNAQIIGANEHESHYVFDILFNNTTDIQPEVHSTDTHGTNQVNF
                     AILHLFGYQFAPRYADIYDKVSKSLYGFKHPSEYREGLIKPIRKINTDLIIDEWENIQ
                     RIILSLAQKTTTQSIIIGKLSAYARKNKTKRALWEYDNIIKSLYWLDYIDSPPLRRNV
                     QRALNRGENYHKLRRAVSYANFGKLRFKTEQEQQLWNECSRLITNCIIFYNASLLSKL
                     LTYKESTGDVQGAALLKQVSPVAWQHIN"
BASE COUNT          747 a          900 c          770 g          647 t
ORIGIN      
        1 ctacgggcgg cgagtaagcg tcaatccccc gattcgagag gttaagcaaa gatgcctctg
       61 ttggttggct gagcggcggg taggcaaaaa gaacatgctc gttcgcaaga ttaccaccat
      121 ccaagaacgg ctgcccatcc tgggcaatga tgagatcgaa gccctctacg gcaggcctcg
      181 cttcacgcac gaagaacgta tggagtattt caccctatcc ccgacggaaa aagccgcgct
      241 tgaacagctg cactctatca aatcgcaggt ttgctttatt ctacagctgg gctacttcaa
      301 agcccgccat ctctttttca cctttacctt tcaagaggtg aaagaggatg ccaagtacat
      361 acaggagcac tattttcccg atgttcaaat cgctgatgta gccatcgcca aagttacccg
      421 gctcaaacaa cagcgcctca tccgcgcgct gttcaattat cgtcactgcg atgcacggaa
      481 acggcagact ttagcagtca aagcccagca ggcagccagg gtttgcggca agcccgtcta
      541 tgttttccgc gaccttctgc actacctgca agaaagctgc atcgtgctgc ctagctatcg
      601 ctttatgcag gagacggtca gcagggcgct tggcgaggaa cagaaccgct tgatcacgtt
      661 gatgcgcgat catttaacac caccggatat cgaggcattg cggcacctac tggcggattc
      721 gcccggacta tatgaggtga cacagctgaa acgcgagccc cgagacttca gcgccgggga
      781 aatcaaacgt gagatccgtc gtggcgagca aattcagccc ttgtatcggc tggtccagcg
      841 gttattgccg aggcttcaga tctccaacga aggcattaaa tactatgcct ccttggtggg
      901 ctactactcc gtctacaagc tcaagcgact gaatcaatgg atggtgtacg tctatctgct
      961 gtgttttgtc taccatcgca ctcagcgatt ccacgataat ctgatcaaca gcctgctgta
     1021 taacgtaagg cgctacggcg atgaagccaa agccgcggcc aaggagaagg tgtacgagtg
     1081 ccacattgaa agccaccaga acctaaaaaa agccggtcgc gtgctgaagc tctttaccga
     1141 cgacagcatt gcggccagca ctcccttcca agatgttcag gccaccgcgt ttgccattct
     1201 tgagcgccac aagctcgcgg tgatcgccga ccagatcgcc acgagcgcga aattcgatga
     1261 gaccaccttc caatggggac acgtcgatga gttggcccgc cagtttaaac ggcatctgcg
     1321 gccgatcctg ctggcggtcg atttcgcagc ctcaaggacc cgcgacccac tcatagaagc
     1381 cgttgatttt ttgaaagctg cgtttcgtca aggccggccg ctcgggcact attcgcctgc
     1441 caccctgcca agccgggtta taccggaaag tatgaagcgc tacctctatg cgcaagccac
     1501 tggcaaactc aaacgcctgc tggtcgaccg gtatgagttt tgggtctatc gcctgttgcg
     1561 caatggcctg gaatccggcg atatcttttg tcgcgacagt gtacggtttc gcagtttcga
     1621 ggatgaccta ctcgacgatc agcgctggca gcagaaggat aagttgatcg atgaagcggg
     1681 cctgatcatc ctcaaacagt ccatccaggc acatttggcc gagcttggcg agctgctcga
     1741 agcgcgcatc gctgaggtca accgacggat cgcctcgggg aagaatgagc acctccagat
     1801 caaaaaacgc ggcccttaca gccgttggac cctcgagtat cctcgcggca ctgagcccgt
     1861 caaccacccc tttttcgatg ccctgaagca ggttgctatc ggtagcattt tgcatttcgt
     1921 caaccagcac tgtcggttta tcgacgcgtt cgaccatgtc ctgggccgct acgccaagca
     1981 gggcgcggac gatcgcatga ttgtcgcctg cctgattgcc tggggcacca acctggggct
     2041 gggtcggatg ggcgaaatct ccgacatcgg ttacaccctc ctcgccgcca cgtcggataa
     2101 cttcatccgc ctcgaaacgc ttaaagaggc caatgaccgc atcagcaatg gcatcgccga
     2161 gctacccatc tttcgccatt acgatctcga tgaagccctg cactcaagca gcgatggaca
     2221 gaagttcgag acccggatac ctaccctcaa tgcccgccat tcacccaagt acttcgggct
     2281 caagaaaggg gttgtgtctt acaccctggt ggctaaccac gtcccggtca atgctcagat
     2341 catcggcgcc aacgagcacg aaagccacta cgtgttcgat attttgttta acaacaccac
     2401 cgacatccag cccgaggtgc attccaccga tacgcacggt accaaccaag ttaatttcgc
     2461 catcctgcac ctgttcggct atcagtttgc gccgcgttat gcagatatct acgacaaagt
     2521 cagcaagtcc ctatacgggt tcaaacaccc gagtgagtac cgggaagggc tgatcaagcc
     2581 gattcggaaa atcaataccg accttatcat cgacgagtgg gaaaatattc agcgcattat
     2641 cttgtcgctc gcccagaaga cgaccacgca gagcattatc atcgggaaac tcagcgccta
     2701 tgcgcgcaaa aacaaaacca agcgcgccct gtgggagtac gacaatatta tcaagagtct
     2761 gtactggctt gattacattg attccccacc gctacgccgg aacgttcagc gggcgctaaa
     2821 ccgcggcgag aattaccaca agctgcgccg agccgtatcg tacgccaact tcggaaaact
     2881 gcgcttcaag acagaacagg aacaacaact ctggaatgaa tgcagccgcc tgatcactaa
     2941 ctgcatcatc ttctacaatg ctagcctctt atccaagctg ctgacttaca aggaaagcac
     3001 cggcgatgtt caaggtgctg cgctactcaa gcaggtctct ccggtcgcct ggcagcatat
     3061 caat
//
LOCUS       DASQSL010001851         1368 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_149984, whole genome shotgun sequence.
ACCESSION   DASQSL010001851 DASQSL010000000
VERSION     DASQSL010001851.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1368
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149984"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..150)
                     /locus_tag="VE844_18645"
     CDS             complement(<1..150)
                     /locus_tag="VE844_18645"
                     /inference="COORDINATES: protein motif:HMM:NF037081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0030527 - structural constituent of
                     chromatin [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HZC03293.1"
                     /translation="MNRADLVTKISKDAEITKRQAEKALNSLVDSVQDALSKGDSVTL
                     VGFGTF"
     gene            527..>1368
                     /locus_tag="VE844_18650"
     CDS             527..>1368
                     /locus_tag="VE844_18650"
                     /inference="COORDINATES: protein motif:HMM:NF014443.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter TrkG"
                     /protein_id="HZC03294.1"
                     /translation="MWKPPIDWRSRVTLTLRRVLLFTPLSLVGLGVEAVYPSGAALRG
                     LFESVYYGVVGLFALQLVLDFWRAASKMAFFRTHAFNALLLLPLPLASDGVRISVGLI
                     ALRQTLELIRFLGPSPGPRQRLSALRFTPARVVTASFAGTILVGTLLLTLPVATRDSQ
                     GTPLLDALFTATSAVCVTGLTVLDTPVHYSTFGQVVLMGLMQVGGLGIMTFSTFLAIT
                     LQRRMGMRDRLIMQDLLEERNIETLKSMIVGILKLTFIIEAIGALTLTWAWYATGESL
                     WAAL"
BASE COUNT          245 a          424 c          386 g          313 t
ORIGIN      
        1 gaacgtgcca aagcccacga gcgtcacgct gtcccccttg ctgagagcgt cctggacgct
       61 gtcgacaagt gaattcaacg ctttctccgc ttgtcgcttg gtaatctccg catctttaga
      121 gatttttgtc acgagatccg ctctgttcat cgcagcctcc ctcccttgtc aaaagtgccg
      181 agtcacacag cgccgcacac actcacaggg gcgcgcacgg cagggtagta cccacgggct
      241 gcttacacaa cgcgtgcgga ttcctgtcac gggcttcaat ctgcggggta ccgcgggtct
      301 tgcgagatat atatgatggg cgaaaatagg attgtcaacc atatttttca gggaagcatg
      361 catgtcagag cccgataatc gtgaaacgac ctcgtgcccg tcaaggcttt cgcaagcgca
      421 acaacggttt acttccctac caaatcccag ggcgcccatg tgacccgggt tcgcagccgt
      481 ctgagtcgct catgagttga ctgaagtgcc tccaagagac tcgaagatgt ggaaaccacc
      541 tattgactgg cgaagccggg ttaccctaac gctgcgtcgc gtcttactct tcacgccact
      601 ctccctggta gggctgggtg tcgaagccgt ctacccctcg ggggctgcct tacgcgggct
      661 gttcgagtct gtgtattacg gcgtggtggg tctgttcgcg ttacaactgg tcctagactt
      721 ttggcgcgcc gcaagtaaga tggcgttctt ccgcacccac gcctttaatg ccttgctgct
      781 cctcccgctc ccgctcgcga gcgacggcgt ccgcatcagc gtcgggctca ttgcgctgcg
      841 gcagacatta gagctcatcc gtttcctggg tccctcgccc ggcccccggc agcggctgag
      901 tgccctgcgc ttcacaccag cgagggtcgt gacggcgagt ttcgccggga ccatcctggt
      961 cggcaccctc ttgttgacgc tgcccgtagc cacccgtgac agtcaaggga cgcccctgtt
     1021 ggacgcctta ttcaccgcca cgtccgccgt ttgcgtgact ggcctgaccg tgctcgatac
     1081 gccggtgcat tattcgacgt tcggtcaggt agtgctgatg gggttgatgc aggtcggcgg
     1141 cttggggatc atgaccttct ctaccttttt ggcgatcacc ttacagcgcc gaatgggcat
     1201 gcgagaccgc ctgatcatgc aggacctcct cgaagagcgg aatatcgaaa ccctcaagtc
     1261 tatgatcgta ggcatcctca agttgacctt tatcatcgag gccatcgggg cgctgaccct
     1321 gacttgggcc tggtatgcaa cgggcgagag cctgtgggct gccctcta
//
LOCUS       DASQSL010001852         1777 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_52636, whole genome shotgun sequence.
ACCESSION   DASQSL010001852 DASQSL010000000
VERSION     DASQSL010001852.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1777
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52636"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..227
                     /locus_tag="VE844_18655"
     CDS             <1..227
                     /locus_tag="VE844_18655"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03295.1"
                     /translation="HPAIAVEWLPPYAPDLNPEEGCHGNVKQHLRNAIPESLSAIRTQ
                     VDRGFARLRRRPDLLRGFFRHAGLAVSQLW"
     gene            complement(314..>1777)
                     /locus_tag="VE844_18660"
     CDS             complement(314..>1777)
                     /locus_tag="VE844_18660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03296.1"
                     /translation="GVGALIPAHIDRPVMARVWLLLATSEETLWCAAFVAQALLWPAL
                     GILSALLWNHLFPNLRQHAFVIACVASAPFMTKVHMLTLTISLGPLLSVILGYCALLL
                     LLRFIRADDGFGRVALALSLPLLGFAIVITEYALPVVMIMLVLFFAYARDPFHPAARI
                     RAILVSVLSTLIAGAAYTAYSLMAEPGARPDVHPLHFLKFGAYHFLRLPFELTSAMWR
                     GVLGGLGTSLGQVHWTSKAGLAATVYGAVVAALLVYGCRNRRSDTPPAEGFRYGRGVF
                     LLVLALGVGLIPTVAMNRRPWDVDDGMSSRFGLPVLPITAALMVLIGIGLVRERFGAI
                     LIIIVGFAAGNATLTAVWSAVQERTAMTIVGNALQAHMSSSDGYTVAVIAAPDRTLGP
                     QHPWELTARLAATWPSEVRDKFWAYREDQAARIFGTRGDCRRPSEINAEIRMGPTFHR
                     LVTRKGQLDHLLWVARRPDGTPAIEPYCLRGMPAAQG"
BASE COUNT          437 a          512 c          510 g          318 t
ORIGIN      
        1 cgcatcccgc gattgcggtg gaatggctcc ctccctatgc gccggacttg aacccggagg
       61 aaggatgtca tgggaacgtc aagcaacatc tccgcaatgc gatccctgaa agcctcagtg
      121 ccatccgcac gcaagtggat agaggatttg cgcgcctgcg tcggcgtcca gacctcttac
      181 gcgggttctt ccggcatgcg ggactcgccg taagccagct ttggtgaaga tcaataaaga
      241 tatattttat tggtctaaaa tttatgctgt cgatcgagaa gaagagatcc acagccacga
      301 ccgatgcggt gggctagcct tgtgcggcgg gcatccctcg cagacagtag ggctcaatcg
      361 cgggtgtccc atcaggcctc cgggcgaccc acagcagatg gtctaactga cctttgcgcg
      421 tcacgagcct gtggaaggtc gggcccatgc gaatctccgc attgatctca gaggggcgtc
      481 ggcagtcacc gcgcgtcccg aagatacgcg cggcctgatc ctcgcggtac gcccaaaatt
      541 tgtccctcac ttctgacggc catgtggccg cgagccgagc tgtgagttcc catgggtgct
      601 gtggccccaa cgtgcggtcc ggcgccgcaa tcactgccac ggtataaccg tcggaggacg
      661 acatgtgggc ttgcagggca ttgccgacaa tcgtcatcgc tgtccgctcc tgaacggctg
      721 accatactgc agtcagtgtc gcatttcccg cggcgaaacc aacgatgatg atgagaatgg
      781 ccccaaaccg ctcccgaacc aagccgatac cgataagcac catgagcgca gcggtgatcg
      841 ggagaacagg aagtccaaat ctcgaagaca tcccatcatc gacgtcccaa ggtctgcggt
      901 tcattgctac tgtcggtatc aggcccaccc cgagcgccag tacgagcagg aacactcctc
      961 gtccataccg aaagccctct gccggagggg tatcgctccg gcgatttcgg caaccataga
     1021 ccagcaaagc ggcgacaacg gcgccataca cagtcgccgc aagacccgct ttcgaggtcc
     1081 agtgcacttg ccctaacgag gtacccagcc cacctagcac accccgccac atcgctgagg
     1141 tcaattcaaa ggggagacgt aaaaaatggt atgcgccgaa cttgagaaaa tggagcggat
     1201 ggacatcggg cctggcaccg ggctcagcca tgagggaata tgctgtatat gcggcaccag
     1261 cgataagagt cgacaagaca ctcacaagaa tggctcgaat ccttgccgct ggatgaaatg
     1321 gatctcgcgc gtaagcgaaa aaaagaacca gcattatcat cacgactggt aatgcatatt
     1381 cagtgatgac tatggcaaag ccaaggagcg gtaagctcag cgcgagtgcc accctgccga
     1441 agccatcatc ggccctgata aaacgaagca gcaagagaag cgcgcagtag ccaagaatga
     1501 cgctcaacag cggtccgaga cttatcgtga gggtgagcat gtgcactttg gtcatgaacg
     1561 gcgcactcgc cacacaggct attacgaagg cgtgctgtcg taagtttggg aataggtggt
     1621 tccagaggag agctgagagt atacccaagg caggccagag aagagcctgt gcgacaaacg
     1681 cagcacacca caaagtttct tcggatgttg caagcagcaa ccatacgcgg gccatgacag
     1741 gtcggtcaat gtgggcagga atgagggcgc ctacgcc
//
LOCUS       DASQSL010001853         1518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_200346, whole genome shotgun sequence.
ACCESSION   DASQSL010001853 DASQSL010000000
VERSION     DASQSL010001853.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200346"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            477..>1518
                     /locus_tag="VE844_18665"
     CDS             477..>1518
                     /locus_tag="VE844_18665"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: protein motif:HMM:TIGR02037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HZC03297.1"
                     /translation="MLERVTPAVVNIATEGRMRIEQNPLFNDPFFRFFFGFPDQPLER
                     KTQSLGSGAIVDAERGLVLTNAHVIANADQITVKLSDGRSYEAEVIGTDPETDIGLVK
                     IPSNDLTDVPMGDSDKLAVGDFVMAIGNPFSLSQTVTSGIVSALGRSGLGIEGYEDFI
                     QTDAAINPGNSGGALVDLRGHLVGINTAIFSSSGGNIGIGFAIPINMARGVMEQLVKY
                     GEVRRGSLGIQLQDLDAELAEAFGISNRQGAVIVNVLEDTPAQKAGLQVGDVIVSVNG
                     RPVQNASAVRNAIGLMQVGDRVALEVVRKGLLGAKERLTVTAKLAGEVATTARSDELK
                     NPRLSGATFENLP"
BASE COUNT          325 a          429 c          462 g          302 t
ORIGIN      
        1 aatatcaggc tccctcaaac tctccctgcc ttggcactgt gattcttacg tcgaactcac
       61 gttaaaaata taaggtatcg ctacagggac aacaagcgat caggaaaggg attaaaaggg
      121 attaaaggtc ggaggtttgg acttcacccc tcactcctca cccctcccca ccccgcttgc
      181 gccgacaaca gcctgtattg ctcaattcac ctcctcgtgg tacaacatgt tgctgacagt
      241 ataagaacaa agcgtgccac cgccgtaggc actgcggcgt aacgtaggat tagcgaggag
      301 gaaaaaacat gattcctgct gtgcttaaac aaccgttatc atctctgagg ccagtttgca
      361 ggcccgttat tagggcgtta gccgcggtcg tcagtgtttg tacattgtat tcgagcgggg
      421 ccgcggccgc gctgccctgg cctgccggtg ggcagggatc accgagcctc gcacccatgt
      481 tggaacgggt aacgcccgcg gtggtgaaca tcgcgaccga aggccgcatg cggatcgagc
      541 aaaatccgct tttcaacgat ccgtttttcc gcttcttctt cggttttccc gatcaaccgc
      601 tcgagcgcaa aacccaaagc ctcggatcgg gcgcgatcgt cgatgccgag cgtggtctcg
      661 tgcttaccaa cgcccacgtc atcgccaatg ccgatcagat cacggtgaag ctgagcgatg
      721 gccggagtta cgaggccgag gtcatcggca ccgatccaga gaccgatata ggtctcgtca
      781 agatcccgtc caacgacctg accgacgtgc cgatggggga ctccgacaag ctcgcagtag
      841 gcgacttcgt gatggccatc ggcaacccct ttagccttag tcagacggtg acctccggta
      901 tcgtcagtgc gctcggtcgc agcgggcttg ggattgaagg ttatgaggat tttatccaga
      961 cggatgcggc catcaatccg ggcaactcgg gaggcgccct ggtggatctg cggggccact
     1021 tggtgggtat caataccgcc atattcagca gtagcggcgg caacatcggc atcggtttcg
     1081 ccatccccat caacatggcg cgcggggtca tggagcaact ggtgaagtat ggggaggtgc
     1141 ggcgcggatc cctcgggatc cagttgcaag acctcgacgc cgagttggcc gaggcgttcg
     1201 gcatctcaaa ccggcaaggt gcggtgatcg tgaacgtgct agaggatacc ccggcacaaa
     1261 aggcgggatt acaagtgggg gatgtgatcg tctcggtgaa cggccggccg gtccagaacg
     1321 ccagtgccgt gaggaacgcg atcgggctca tgcaagtcgg tgatcgggtc gccttggagg
     1381 tcgtgcgcaa gggtttgtta ggcgccaagg agcgcctgac ggtgactgca aagctggccg
     1441 gggaggtggc cacgactgcg cgctcggacg agctcaaaaa cccccggctt agtggtgcga
     1501 cgtttgaaaa cctaccga
//
LOCUS       DASQSL010001854         1213 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_150013, whole genome shotgun sequence.
ACCESSION   DASQSL010001854 DASQSL010000000
VERSION     DASQSL010001854.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1213
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150013"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..789)
                     /locus_tag="VE844_18670"
     CDS             complement(<1..789)
                     /locus_tag="VE844_18670"
                     /inference="COORDINATES: protein motif:HMM:NF040183.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HZC03298.1"
                     /translation="MSTKPASPAQQARQALGVRLREIRTGAGLTGRALAVGIGCHFTK
                     VSRIENGSQAPSEDNIKAWCRACNAEQQIPDLIATARAIESMYVEWRRQTRAGMKQLM
                     LTPVSLYKRTTLFRIYEHSAIPGLFQTAEYSAAILTYFIDFLDAPDDLDAAIQARMER
                     QEIIYSGNRRFLAVLEENALHARVGSPGIMAGQLDRLLATISLPRVSLGIIPQAALRR
                     TFAQVGFWIYDNAIVGVETPTAKLEITQPREIQLYTRMFEHLRKL"
     gene            complement(770..>1213)
                     /locus_tag="VE844_18675"
     CDS             complement(770..>1213)
                     /locus_tag="VE844_18675"
                     /inference="COORDINATES: protein motif:HMM:NF045158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03299.1"
                     /translation="GTPTGQLPRYRILLNGRRESQNDTDWLQPWFDRVRAATRAGKII
                     RRARIISEPVSGYQKWVIKDSHLFVEAGEDIRWVPRSRVSTVALPGNDFWLFDDQVVV
                     FLIFAASGQVVDRQKTADHAAVELCRNAFEAVWKLSIPDSEYKTG"
BASE COUNT          230 a          314 c          367 g          302 t
ORIGIN      
        1 taattttctt aggtgttcga acattctggt gtagagctga atttcgcgtg gttgtgttat
       61 ttctagtttg gcggtaggtg tttcgacgcc tactatggcg ttgtcataga tccaaaaccc
      121 gacctgcgca aacgttcgac gtagtgccgc ttgggggatg attccgaggc tgactcgtgg
      181 aagcgaaatc gtggcgagga gtcggtcaag ttgaccggcc ataatcccag ggcttccgac
      241 tcgggcgtgt agggcgtttt cttccaggac tgctaggaat cggcggtttc cggagtagat
      301 gatttcctgt ctttccatgc gtgcttgtat cgcggcgtcg agatcatcgg gtgcgtcgag
      361 aaaatcgatg aagtaggtaa ggatggcggc agagtactcg gcggtttgga atagtccggg
      421 tatggcgctg tgctcgtaga tccgaaatag ggtcgtccgt ttgtaaagcg acacgggtgt
      481 cagcatgagc tgcttcatgc cagcgcgggt ctgtcgtcgc cattcgacgt acatggattc
      541 gatcgcgcgc gccgtggcga tgaggtcggg aatttgctgc tccgcgttgc aggctcggca
      601 ccatgctttg atgttgtctt cggagggggc ttggctgccg ttttctattc gactgacttt
      661 cgtgaagtga catccgatgc cgactgctaa ggctcgtccc gtcagacctg ctcctgtacg
      721 gatctcgcgg agacgaactc caagcgcctg ccgtgcctgc tgagcagggc tagccggttt
      781 tgtactcact gtcgggaatc gacagtttcc acactgcttc gaatgcgttt ctacacaact
      841 cgaccgcagc gtggtcggcg gttttttggc gatcaacgac ctgcccgctg gcagcaaaga
      901 tcagaaagac gacaacttgg tcgtcgaata gccagaaatc attacctggc agggccacgg
      961 tggatacgcg gctacgcggc acccagcgaa tgtcctcgcc tgcttcaaca aacagatggg
     1021 agtctttgat tacccatttc tggtagcccg aaacaggctc ggaaattatg cgcgctcgtc
     1081 ggataatctt acccgcccga gtggcagcac gtacgcggtc gaaccatggc tggagccagt
     1141 cggtgtcgtt ctggctctcc cgcctcccat ttagcaagat gcggtatctc ggcagctgtc
     1201 ccgtaggagt ccc
//
LOCUS       DASQSL010001855         2846 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_118444, whole genome shotgun sequence.
ACCESSION   DASQSL010001855 DASQSL010000000
VERSION     DASQSL010001855.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2846
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118444"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..506
                     /locus_tag="VE844_18680"
     CDS             <1..506
                     /locus_tag="VE844_18680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005004525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DnaB-like helicase C-terminal domain-containing
                     protein"
                     /protein_id="HZC03300.1"
                     /translation="KMFIDDTPALTPGELRARCRRIAREHGLGLVIIDYLQLMQVPGT
                     KENRATEISEISRSLKSLAKELNVPIVALSQLNRSLEQRPDKRPRMADLRESGAIEQD
                     ADVIVFIYRDEVYDEASPDKGVAEIIISKQRNGPIGTVRLTFLGQYTRFENFIAADNY
                     NAPRNYG"
     gene            503..1585
                     /gene="alr"
                     /locus_tag="VE844_18685"
     CDS             503..1585
                     /gene="alr"
                     /locus_tag="VE844_18685"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005004527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HZC03301.1"
                     /translation="MTRPACVVIDRQAARANLARVRKLVPHRKIMAIIKADAYGHGLL
                     RMAEPLADADAFGVACLEEAQILREAGIEQPIVLLEGPFSETELPEIQKLRLETVIHQ
                     EEQVRMLECLPPGRPIPVWIKVDTGMHRLGFAPGLIDIIWQRLSSCRSVVEPVRLITH
                     LACSHERNHPFVLAQLECFNAVTRSITAERSIANSAAILAWPDTHADWIRPGLMLYGV
                     SPFNDSTAIEEGFSPVMSLRSALIAINFVRAGETVGYDGSWVCPEDRRVGVVALGYGD
                     GYPRYAPSGTPVLVNGKRAVLIGRSSMDMLSIDLRGHPEAKIGDPVIFWGEDLPVEEI
                     ARWAGTIPYELLCGVARLRARYLDRA"
     gene            1644..>2846
                     /gene="radA"
                     /locus_tag="VE844_18690"
     CDS             1644..>2846
                     /gene="radA"
                     /locus_tag="VE844_18690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019472669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HZC03302.1"
                     /translation="MVKFKIAFQCQACGATAPKWSGQCGECGAWNSLIEVIASQSGAT
                     TRGRPGSALPAICTLGEVPLVEEMRTPTGLSELDRVLGGGLVAGSVVLLGGDPGIGKS
                     TLLLQMLASLSQAAGLKVLYVSGEESAQQVALRARRLDLKADSLRLLTETHSERILEL
                     AGKETPRVIVIDSIQTVYTELLGSAPGSVGQVRESAAMLVRYAKHTGTAVFLVGHVTK
                     EGALAGPRVLEHMVDTVLYFEGDGNSRFRIVRAIKNRFGAANELGVFAMTDRGLREVS
                     SPSAIFLSQHDFEVAGSVVMVTREGTRPLLVEVQALVDQSSLANPRRVAVGLDPNRLS
                     MLLAVLHRHGGVASYGQDVFINVVGGVRINETGADLAVALAVLSSLHNRPLAPGLVVF
                     GEIGLAGEI"
BASE COUNT          534 a          766 c          919 g          627 t
ORIGIN      
        1 ccaagatgtt tatcgacgat acgccggcgt tgacgccggg cgagttgcgg gcccggtgtc
       61 gccggatcgc gcgcgagcat ggcctggggc tggtgatcat cgattatttg caactcatgc
      121 aagtgccggg cactaaagaa aatcgggcta ccgagatctc ggagatctca cggtcgctta
      181 aatccttggc caaagagctc aatgttccaa tcgttgcgct gtcgcagctc aatcgcagcc
      241 tcgagcagcg ccctgacaag cgcccgcgga tggcggatct cagagaatcg ggcgctatag
      301 agcaggacgc ggacgtcatc gtcttcatct atcgggatga ggtctatgat gaggctagcc
      361 ccgacaaagg tgtggccgag atcatcatca gtaaacagcg taacggcccg atcggcacgg
      421 tgcgattgac ctttttaggt cagtatacac ggtttgagaa tttcatcgct gccgataact
      481 acaacgctcc taggaattat ggatgacacg cccggcctgc gtggtgattg atcggcaggc
      541 ggcacgggcc aatttagcgc gcgttcgtaa gttagttcct caccgaaaga tcatggctat
      601 tatcaaggcc gatgcatacg ggcatggcct gttgcgtatg gccgagcctt tggcggatgc
      661 cgatgcgttt ggggtggcct gtcttgagga ggcgcagatc cttcgggagg cagggatcga
      721 gcagccgatc gtgctcttgg aaggtccctt ctccgaaacc gaattgcctg agatccaaaa
      781 acttaggctc gagacggtca ttcaccaaga agagcaagtt cgcatgctcg agtgcctgcc
      841 tcccggccgg cctatccctg tgtggatcaa ggtggatacc ggaatgcacc ggctgggttt
      901 cgcccctggg cttatcgata taatctggca acgcttgtcg agctgccgct ccgtagtcga
      961 accagtgcgc ttgataaccc acctggcctg ttcccatgaa cgcaatcacc ccttcgtgct
     1021 cgcccagctc gagtgcttta atgcagtgac acgttcaatc acagcggagc gcagtatagc
     1081 gaattccgct gcgatcctgg cctggcccga cacccacgcc gactggatac ggccgggctt
     1141 aatgctctat ggggtctcgc ctttcaacga cagtacggcg atcgaggagg ggttctctcc
     1201 ggtcatgagc ttgcgctcgg cgctgatcgc gatcaatttc gtgcgcgccg gggagacggt
     1261 cggttatgat gggagctggg tgtgcccgga agataggcgg gtgggggttg tggcgctcgg
     1321 gtatggcgat ggttatcccc gctatgcccc ctcaggaacg ccggtcttgg tcaacggcaa
     1381 acgcgccgtg ctgatcggcc ggtcctctat ggacatgctg agcatcgatc tgcgcggcca
     1441 tcccgaggcc aagatcggcg atccggtgat cttctggggt gaagatttac cggtggaaga
     1501 gatagcccgc tgggctggta cgatacctta tgagcttctt tgcggcgtgg cgcgcctgcg
     1561 cgccaggtat ctcgatagag cctaagccag tatttaccta atacgttctg acatgacaaa
     1621 caaatcccgc actatgtgat ataatggtaa aatttaagat tgccttccaa tgccaggcct
     1681 gcggcgcaac cgcgcccaaa tggtcgggcc aatgtggcga atgcggtgcc tggaatagtt
     1741 tgattgaggt catcgcttcc cagagcggag caacaacccg ggggcgtccg ggcagcgcgc
     1801 tgccggcgat ctgtaccttg ggtgaggtgc cgcttgtcga ggagatgcgg accccaaccg
     1861 gtcttagtga gctcgaccgg gtgctcggtg gaggattggt ggcgggttcg gtggtgttgc
     1921 tgggcgggga tcccgggatc ggcaaatcta ccctgctgct gcagatgctc gcttccttgt
     1981 cgcaagcagc ggggctcaag gtgctgtacg tgagcggcga ggaatcggcc cagcaggtgg
     2041 cgttgcgagc gcgccggctg gatctcaagg ccgactcctt acggcttctg accgagaccc
     2101 atagcgagcg catcttagag ctagcaggca aagagacgcc gcgcgtgata gtgatcgact
     2161 ccattcagac ggtttacacg gaactcttgg gatcagcgcc gggcagtgtc gggcaagtgc
     2221 gggagagtgc ggcgatgctg gtgcgttatg ccaagcacac cgggaccgct gtgtttctcg
     2281 tcggccatgt gactaaagag ggtgccctgg ccgggccgcg ggtcctcgaa catatggtcg
     2341 ataccgtgct ttattttgaa ggggatggta atagccgttt ccggatcgtg cgggcgatca
     2401 agaatcgttt cggcgcggcc aatgagcttg gggtctttgc catgaccgat cggggcttgc
     2461 gcgaggtcag cagcccctca gccatctttc tctcccagca cgactttgag gtggcgggca
     2521 gtgtggtgat ggttacccgc gagggcaccc ggcctttatt ggtcgaggtc caggccttag
     2581 tggaccaatc ctctcttgct aatccccgac gggtagcagt gggtctcgat cccaatcgtc
     2641 tttcgatgtt gcttgcggtg ttgcaccggc atgggggcgt ggccagctat ggccaggatg
     2701 tgtttatcaa tgtcgttggc ggggtgcgta tcaatgagac aggcgctgat ctggcggtgg
     2761 cgctcgcggt cttatcgagt ctgcacaatc gtccgctcgc accggggctg gttgtattcg
     2821 gggagatcgg tttggccggg gagatc
//
LOCUS       DASQSL010001856         1528 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_150058, whole genome shotgun sequence.
ACCESSION   DASQSL010001856 DASQSL010000000
VERSION     DASQSL010001856.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1528
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150058"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..560
                     /locus_tag="VE844_18695"
     CDS             <1..560
                     /locus_tag="VE844_18695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007465543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HZC03303.1"
                     /translation="IYFAPYVLGVAVIGILWRFLLDSNVGYINYYLGQLGLPDSIAWT
                     SSLPWAWITLVGVTVWWTLGFNAVIYLAGLQDIDPALYDAAKVDGANRWHRFWHVTLP
                     GLRPVLLFIITITILASANMFGQAYLLTEGSPGEETQTAVMYIAEEGLRNFRMGSASA
                     MSYVLALFLMVISVLNFVFFRQRED"
     gene            564..1439
                     /locus_tag="VE844_18700"
     CDS             564..1439
                     /locus_tag="VE844_18700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018192416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HZC03304.1"
                     /translation="MAQSTVRASRKQNARIPQIARLSLSYIALFLLTAVFVIPLLWML
                     LTTFKTNAEATQSVPTWIPRDFSTVGFQTILNTTSQTPVLWWLFNSAFAAIAHVVLVL
                     VTAAPAAYALARLDFRGRNVMFAVIISTLFIPPIIFLMPSYLIVDYLRWIDTLLAVIV
                     PTAAGAFGVFFLRQFFVSLPIELEEAALIDGANQFQIFTRIVLPNSKPPLATLAVLAF
                     LTNWNEFLWPVYVLFSPKSLTLPPGLSILQGNYSTDYPVVMAGGVIASIPVLIVFFIA
                     QRYIIEGVSRSGLKG"
BASE COUNT          302 a          436 c          418 g          372 t
ORIGIN      
        1 ccatatactt cgccccctac gtgctcgggg ttgccgtgat cggcattttg tggcgcttct
       61 tgctcgacag caacgtcggg tacattaact actaccttgg ccaactggga ctgcccgaca
      121 gcatagcatg gacctcctcg ctgccgtggg cgtggatcac cttggtcggg gtgaccgtgt
      181 ggtggacgct agggttcaac gccgtcatct acctggcagg cctccaagac atagaccctg
      241 cactctacga cgccgccaag gtggacgggg cgaatcgctg gcataggttc tggcacgtga
      301 ccttgcccgg actccggccc gtactcctgt ttatcattac cataacaata ctggcctcgg
      361 ccaacatgtt tggccaggct tacctcctca ccgaggggtc tccaggtgag gagacgcaga
      421 ctgccgtcat gtacatcgcg gaagagggtc tgcggaactt ccggatgggc agcgcgtcgg
      481 cgatgagtta cgttctggcc cttttcttga tggtgatcag cgttctcaac ttcgtgttct
      541 tccggcaaag ggaggattga gagatggctc agtcgacggt acgagcatcg cgaaagcaga
      601 acgcgcggat tccgcagatc gcgagactat ctctgtccta cattgcgctg ttcctattga
      661 cagccgtgtt cgtcataccg ctactgtgga tgcttcttac cacgttcaag accaacgccg
      721 aagccacaca atcggtcccg acctggattc ctcgcgattt ctcgacggtg ggcttccaga
      781 ctatactgaa tacgacttcg cagacgccag ttctttggtg gctgttcaac agcgcatttg
      841 cggcgatagc gcacgtggtt ctggtactcg tcacggctgc accggcggcc tacgcactag
      901 ctcggctcga ctttcgcggg aggaacgtga tgttcgccgt catcatctcc acattgttca
      961 tccccccgat tatctttctc atgccgagct acctgatagt cgactacctg cggtggatcg
     1021 ataccttgtt ggcggttatc gtgcctactg cggccggggc attcggagtc ttcttcctga
     1081 ggcagttctt cgtatcgttg cctatagaac tggaggaggc agcgctcata gacggggcca
     1141 accagttcca gatctttaca cgcatcgtgt tgcctaactc caaacctcct ctggctacac
     1201 tggcggtgct cgcttttctg acaaactgga acgaatttct gtggccggtt tacgtgcttt
     1261 tcagcccgaa aagcctcacc ttgccaccgg ggctttcgat cctgcagggc aattactcga
     1321 cagattaccc tgttgtcatg gcgggaggcg tcatagctag cataccggtc ctgatcgtat
     1381 tcttcatagc gcagagatac attatcgaag gggtgtccag gagtggactc aaggggtgag
     1441 agacgcttcg tgtcactgtg cgcagtacct caacgtacct gagaacctca agcagataag
     1501 ggtagcaacg ttctcagtaa gaaaaatg
//
LOCUS       DASQSL010001857         2126 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_93315, whole genome shotgun sequence.
ACCESSION   DASQSL010001857 DASQSL010000000
VERSION     DASQSL010001857.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2126
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93315"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(123..1261)
                     /locus_tag="VE844_18705"
                     /pseudo
     CDS             complement(123..1261)
                     /locus_tag="VE844_18705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239811.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            complement(1258..2126)
                     /locus_tag="VE844_18710"
                     /pseudo
     CDS             complement(1258..2126)
                     /locus_tag="VE844_18710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007611975.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
BASE COUNT          479 a          624 c          620 g          403 t
ORIGIN      
        1 caattcacca gcaaggcgtc gtctccgtcc cgcaacggca ccgcaccgtc gaacgggtcg
       61 tgacgtggga ctgccgatgg gccagcgggg accgaagagc agggggccac ccgcagctcc
      121 ggtcaatcaa gcgcctcctt ataacggatc agggcaacgg tggcggccac tgccaggaac
      181 aaagcgagcg gccagatctc agggaggatc tcagggagtg cattgccttt gagcagaatg
      241 ccccggacga tgcgcaaaaa atgcgtgagc gggaagagct cccctaagta ttggcccact
      301 ctggcatgcc gcggaagggg aacataaagc ctgagagaag cagagatggt aggaaaaaga
      361 agaatgtcat ctgcatcgcc tgcagctggt tcttggccaa ggtggagaag gtgatcccaa
      421 ccatcaggtt ggcgataata aacacaagta ctaagacgga cagtagcact aagctgccct
      481 gtatgggtac gccaaagatc agccacagtg ctagcataat taatgctacc tggatataac
      541 ctactatgat gtaagggatg atctttccag tgatcacctc gaacgggcgc acaggtgtag
      601 caagcaggtt ttccattgtg ccgcgttcgc gctcacgggt gatcgcaagt ccagtcatca
      661 tcaccatagt catggtcagg atcacccccg tcaggccagg cacgatgttg taagcggtga
      721 tgccttcggg gttataacgc cgatggacac ggagctcgaa gggtggattc ttccccttca
      781 ggtactctag acttccatac agatctcggt ttagggcagt gaagctcagc gtattgaggg
      841 tagcaatagc attggcagta gcggtggggt cagtggcatc ggcttccatc agtagtactg
      901 ggcgctcccc tcgtatcagc ttgcgcgcga aattctccgg gatcgttact acgaactgga
      961 catctcctga cgccagtagg tattcaacct cggcctcagt gcggggttca aacagcacct
     1021 gaaagtaacc gctgttttcc aggctacgga tgaagttccg ggcgaaaatg ctgttatccg
     1081 cagataggac ggctgtaggc agatgcttag ggtcgaagtt aatggcgaat ccgaatagga
     1141 tgatctggat aagagggagg cccaccatca tcgcaaaggt gagccggtcg cggcgcatct
     1201 gcacgaactc cttcatcacc acggcccaga aacgcttgcc agaaaacctg tagcgcgtca
     1261 tggccggacc tcttgtcgct ccatcagagc gatgaagacg tcctcgaagc ccggttcgat
     1321 gcgcgcccag accaagcccg gcgcttgcaa gcccgcgatc gtctgcgcca atagaggcgc
     1381 atcggtgccg ctcacatgga gcgtggtacc gaaggccgct acttgctcta cacccggtcg
     1441 gccgcgcagc cgctctgcca gcgccatcag atcttcacca gccacggaat aggtgatcag
     1501 gcccgatcgg gcgatgatct cctgcactgt accatggacc agcaaccggc cgtaggcgat
     1561 ataggccaga cgatgacagc gttccgcctc gtccatgtaa tgggtgctca ccagtaccgt
     1621 gacgcccgcg gccgcaagta ggtggatctc gtcccagaag tcacgccgtg ccttgggatc
     1681 gcccccgctg taggttcatc caatagcagc agttgcggcc gatgcaggag acatgcagcg
     1741 agcgccagcc gctgtttcca gccacctgac aagctccccg cgagctgctg tcggcgatcc
     1801 accaagccga gccgttccag gctcacgtcc acggcctggc gccgatccac tacctcgtat
     1861 aggcgcgcca cgaagtccag attctcgccc acactgagat cctcatagag actgaagcgc
     1921 tgggtcatgt agccgacctg acgctttatc tcgctcgact gggtgaggat atcgtagccg
     1981 agacaggtgc cacttcctgc gctcggcttg agcaggccgc acaacaggcg tatcgccgtg
     2041 gtcttgccac tgccattggg accgagaaag ccgtagatct ccccgcgttc gacctgcagc
     2101 gtcagcgcgt tcacggcgat gagctc
//
LOCUS       DASQSL010001858         1075 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_107680, whole genome shotgun sequence.
ACCESSION   DASQSL010001858 DASQSL010000000
VERSION     DASQSL010001858.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1075
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107680"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..346
                     /locus_tag="VE844_18715"
     CDS             <1..346
                     /locus_tag="VE844_18715"
                     /inference="COORDINATES: protein motif:HMM:TIGR02608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="delta-60 repeat domain-containing protein"
                     /protein_id="HZC03305.1"
                     /translation="SSRGRMTTDLGGEDDALAVALQPDGKIVTAGSTYGSETFEGVLV
                     RYLPDGSLDTAFGDAGKVTTDFGGQDNNVWAIALQPDGKIIAPGGGFTRARYLPNGSL
                     VLTAHSPKRKFP"
     gene            343..>1075
                     /locus_tag="VE844_18720"
     CDS             343..>1075
                     /locus_tag="VE844_18720"
                     /inference="COORDINATES: protein motif:HMM:NF015078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03306.1"
                     /translation="MNTPSDISRLKWVLGTPYFVQGTSHLTLVPILYFIKFVLGLGDA
                     GGQLFDSLMNAGWLIKPVWGYLSDSVALFGYHRKSWFVLMAFLAVIFWMGNAALVAVG
                     VRIPILFLLTFNLAFATYAFVDVVCDALMVTWGQQLKRVGSFVNFQWTVLAIASAGAV
                     FLGAWFQDKVQAGTLPLALIFLLTGVPPLFTAVVGLWKIEEQPVRLEKRCSPRAPLYW
                     RASLNRSITTFWQGLRAIPIHVAKNR"
BASE COUNT          182 a          306 c          322 g          265 t
ORIGIN      
        1 gagcagcagg ggcaggatga ccaccgatct tggcggggaa gatgatgccc tcgctgtcgc
       61 cttgcaaccg gacggcaaaa ttgtcacggc cggttcgacc tatggcagcg aaacttttga
      121 aggtgttctg gtacgctacc tgcccgacgg ctccctggat accgcctttg gcgatgccgg
      181 aaaggtgacc actgattttg gcgggcagga taataacgtc tgggctattg cgttgcagcc
      241 ggacggcaag attatcgcgc ccggtggagg ctttacccgc gcgcgctacc tacccaacgg
      301 ctctctggtt ctgacagcac attctccgaa gaggaaattt ccatgaacac accttcagac
      361 atatcccgcc tgaaatgggt gcttggcacg ccctatttcg tccagggaac cagccacctc
      421 accctcgtcc ccattttgta tttcatcaag tttgtgctgg gcctgggcga cgccggcggc
      481 cagttgttcg actcacttat gaatgcgggc tggttgatca agccggtgtg gggctatctt
      541 tccgacagcg tggcgctgtt cggctaccac cgcaagtcgt ggttcgtgct catggcgttt
      601 ttggccgtca ttttttggat ggggaatgcg gccctggttg ctgttggcgt tcgcatcccc
      661 attctgttct tgttgacttt caacctggcg tttgccacct atgcctttgt ggatgtggtc
      721 tgcgacgcac tgatggtgac gtggggtcaa cagctgaagc gtgtggggtc gtttgtcaac
      781 tttcagtgga ccgtgctggc tatcgcgagc gctggcgcgg tctttctcgg cgcgtggttt
      841 caggacaagg tccaggctgg cactctcccc ttagccttga tcttcctgct cactggcgtc
      901 ccaccgctgt tcacggccgt ggtcgggctg tggaagattg aggaacagcc ggttcgcctc
      961 gaaaagcgtt gctctcctag agcgcctctg tattggcgcg ccagcctgaa ccgcagtata
     1021 accacgttct ggcaggggct gcgcgcgatc cccatccatg tggccaagaa cagga
//
LOCUS       DASQSL010001859         1810 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_172799, whole genome shotgun sequence.
ACCESSION   DASQSL010001859 DASQSL010000000
VERSION     DASQSL010001859.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1810
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172799"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            199..798
                     /locus_tag="VE844_18725"
     CDS             199..798
                     /locus_tag="VE844_18725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013101352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HZC03307.1"
                     /translation="MNRASFSAKLPPAKPKNVDRRAREYLTPSEVDQLIHTARKVGRY
                     GHRDATLILMMYRHALRVSEVSGLRWDLIDLKRALFHVRRLKNGMPSVHPLHGPELRA
                     LRRLKMEYPGLAYVFISERGSPLTARAIRHIILRVGEEADLPFPVHPHMLRHACGFYL
                     ANKGIDTRSIQHYLGHCNIQHTVRYTELAPQRFSEFWED"
     gene            809..1744
                     /locus_tag="VE844_18730"
     CDS             809..1744
                     /locus_tag="VE844_18730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03308.1"
                     /translation="MSKQSRRKRKALQKHKPPHRPVKGPRSAVPSAQTLLRVMQLNFQ
                     TREALAKTAASLQPTLWKRDRGSVERIENAQCIEEVLDLVPIATGLAEHAWLKRMRDF
                     GPGATTVITERLKNLPSPPYPKDRTVIEEKYIEALRWCEDTGIEPLLECWDYFDDYGR
                     SLACVVLGLLQAQHAADRIWAFYQKVKNNRHENLFVGALWGLIDLQDKRAAEALLELL
                     TAGRDFYELFGFLSRAGDRRAVLPLLLLSVGAEEAIREEVMWALTSIAHRIGRTAFLE
                     ELENVSVPESQAGKARRSTLPETFRIQDKEGWGSR"
BASE COUNT          403 a          485 c          512 g          410 t
ORIGIN      
        1 ggattaccgg gcgctcacgc cgctcatcta tcaccacgtg aacccctatg gtctgttcga
       61 gctggacatg gcagaacggt tacccatcga gcaggcaccg ggatcccttg cggcctgagt
      121 tgaccgaaaa gagctgttta cggttaactg ataaatctaa aggcccatcg ctatgcgggc
      181 cttgagaaac tgacagtcat gaacagagca tctttttcgg caaagttacc tcccgcgaaa
      241 ccgaaaaatg tggatcgccg tgcccgtgag tacctgacgc cctctgaagt cgaccaactc
      301 atccacactg cccgtaaagt gggtcggtat ggtcatcgcg atgcgacatt gattctcatg
      361 atgtatcgcc atgccctgcg ggtttctgag gtcagtggct tgcgctggga cttgattgat
      421 ctgaagaggg cacttttcca tgtgcgccgc ctcaagaatg gcatgccttc ggttcacccc
      481 ctgcatggcc ccgaactgcg agcgctgaga cgcctgaaga tggagtatcc cggcctggcc
      541 tacgtattca tttcggagcg aggcagtccg ctgaccgcac gcgccatccg tcacattatc
      601 cttcgggtgg gtgaagaagc cgacttaccc ttccctgtcc atccccacat gcttcgtcat
      661 gcctgtgggt tttacctggc caataagggc atagacaccc gctctattca gcattacctg
      721 ggccactgca atatccagca caccgtccgg tacacggaac ttgcgcccca acgatttagt
      781 gagttttggg aagattgacg taggaaatat gtccaaacaa agccgccgaa aacgtaaggc
      841 cttacagaag cacaaaccgc cgcatcgtcc tgtaaaaggg cctcggagtg ctgtgccgag
      901 tgcacagacg ctcctgcggg ttatgcagct taactttcag actcgagagg cacttgccaa
      961 gacagcggcg agcctccagc caactctctg gaaacgcgat cgtggaagcg tagaacggat
     1021 cgaaaacgcc cagtgcatcg aggaagtgct cgatttggtg cccatcgcca ccggcttggc
     1081 cgaacatgcc tggttaaagc ggatgcgcga ttttggcccg ggtgccacaa cagtcattac
     1141 tgagcggctt aaaaacctac catcgcctcc ttatcctaaa gaccgcactg tgatcgaaga
     1201 gaaatacatt gaggcgctcc gttggtgtga ggacactggg attgagcctt tactcgagtg
     1261 ctgggattac ttcgatgatt atggacgaag tctagcctgt gtggtgttgg gattgcttca
     1321 ggctcagcat gccgcggatc ggatttgggc tttttatcaa aaggtcaaaa ataaccgcca
     1381 tgagaatctt tttgtcggtg cgctatgggg cttgatcgat ctacaggata aacgtgcggc
     1441 cgaggccttg ctggaattat taacggcggg gcgtgacttc tatgaactgt ttggctttct
     1501 ctcacgtgcc ggtgatcggc gagcggtgct acctttgttg cttctgtccg tgggagccga
     1561 ggaggctatc agggaagagg ttatgtgggc cttgaccagc atcgctcatc ggatcggtcg
     1621 cactgctttc ctcgaggaat tggaaaatgt ttctgtacca gagagtcagg caggcaaggc
     1681 ccgccggtcc accctcccgg aaactttccg gattcaagac aaagaagggt ggggaagccg
     1741 atgatggcgc gggcagggac gggttcggta attcaggcgc agtcgctagc cgcgcgatgc
     1801 gcattggaac
//
LOCUS       DASQSL010001860         1606 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_137389, whole genome shotgun sequence.
ACCESSION   DASQSL010001860 DASQSL010000000
VERSION     DASQSL010001860.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1606
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137389"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(112..1323)
                     /locus_tag="VE844_18735"
     CDS             complement(112..1323)
                     /locus_tag="VE844_18735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015051472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZC03309.1"
                     /translation="MRVVYDRCCGLDVHKKTVVACVITPAGQETRTFSTMTQDLLALS
                     EWLERWGVTHVAMESTGVYWKPLFNLLEDTFEVLVVNAHHIKTVPGRKTDMRDAEWIA
                     DLLQHGLVRGSYIPDRPQRELRELVRYRRSLVGNRTQVVNRIQKVLEGANIKLAVVVS
                     NVVGVSGRAMLEAMVEGTEDPGVLAALAKGKLRAKQPALETALQGLMGPHQRLLLASH
                     LRHLDLLDAEIAQLDQEVAARLDPFQEALERLDEIPGVGRRCAEDILAEVGTDMSHFP
                     TAGHLASWAKVCPGIHESAGKRKGIGTGHGNKWLRATLTEAAQAAGRTKGTYLWSQYH
                     RLAARRGKNRATMAVSHTILTTIYYMLRRGTRYQDLGPNYFDERDRQAAVRRTVHRLE
                     RLGYRVTLEAA"
BASE COUNT          315 a          527 c          438 g          326 t
ORIGIN      
        1 ccatgctgct gaacccagca tagaagagat gagattagcc caggattatc agaagccatc
       61 ccaaggcccg tagctgagag cggaatttgc catgaaaatg ggcgagccca gctatgctgc
      121 ctccaatgtt acccggtacc cgagacgctc caggcgatgg acggtacgcc ggacggctgc
      181 ctgccgatcc cgctcatcga agtagttggg gccaaggtcc tgatatcgtg tcccccgacg
      241 aagcatatag tagatagtgg tcaggatagt atgcgacaca gccatagttg cacgattctt
      301 gccccgacgt gcggccaacc ggtggtactg ggaccacaga taggtacctt tcgtacgtcc
      361 cgcagcctgg gcggcttctg tcagggtagc ccgcagccat ttgttcccgt gcccggtacc
      421 gatgcccttc cgcttccccg cgctctcgtg gatgccggga cagaccttgg cccaggaagc
      481 cagatggccc gccgtaggga agtggctcat gtcggtgccc acctcggcga gaatatcctc
      541 ggcgcagcgc cggcccactc cggggatctc atccaatcgt tccagagcct cttggaaagg
      601 gtccagacga gctgcaacct cctggtccaa ctgcgcgatc tccgcgtcca gcaaatccag
      661 gtggcgcaag tggctggcca gcagcagtcg ctgatggggc cccatgagac cttgcaacgc
      721 cgtttccaga gcaggctgct tagcccgcag ctttcccttg gccagggctg ccagcactcc
      781 ggggtcttcg gtgccctcca ccatagcctc cagcatagcc cggccagaca cccccaccac
      841 attggaaacc acgacagcca gcttgatgtt ggctccctcc aggaccttct gaatgcggtt
      901 gactacctgg gtccggttgc ctaccaagct tcgccggtag cggaccaatt cccgcagttc
      961 ccgctggggc cggtcgggga tgtagctccc tcgaaccagg ccatgttgga gcagatcggc
     1021 gatccactcg gcgtccctca tatcagtctt gcgcccaggc accgtcttga tatggtgggc
     1081 gttcaccacc agcacctcga aagtgtcctc cagcaggttg aacaacggct tccagtagac
     1141 cccagtgctt tccatcgcca catgggttac tccccaacgc tccaaccatt ccgacaaggc
     1201 cagcaggtcc tgggtcatag tgctaaaggt acgggtctcc tgccccgctg gcgtaattac
     1261 acaagccacc accgtctttt tgtgcacgtc caggccacaa cagcgatcgt aaaccacacg
     1321 cataagactg ccctcccctt gcactcccag cgggcaggcg acctgctgct tggagaattt
     1381 gccatgcgtg ctcccggtct accggggcta cagttaacgg cgccttcagg tcaccgacat
     1441 cagttttggg atcgggctcg cggcgccaaa attcctcgag ctcatacgcc tgccggggta
     1501 ctcccatttt catctgttat ggcgctcgtg ccaacgagca tcactgtttt gggactggtt
     1561 caggtaatca ttgcagcacc gatcaagcct tgctgatctg taagct
//
LOCUS       DASQSL010001861         1636 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_118485, whole genome shotgun sequence.
ACCESSION   DASQSL010001861 DASQSL010000000
VERSION     DASQSL010001861.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1636
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118485"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(5..1303)
                     /locus_tag="VE844_18740"
     CDS             complement(5..1303)
                     /locus_tag="VE844_18740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03310.1"
                     /translation="MSPAKRYANKQAKARQRRRLNAQQRLERDRRQAQQAAEALHHAL
                     EELGLPETLVSEIEGRLQSQQKLLGKIVGVMFPALFGCRTPSELCRVRGWDKNWPSRL
                     LHALPKRSWLKRLRRLGLEVLVPLWRHVEGKSEATQSRWQWTWAVDDSVFHKYGEQLG
                     LVGHWWSGQQHRVLSGIDGLLLIVVIGDGRLVVPVDFVVRRPDPIGVGGPCRDKLSWA
                     REMINARLLALGKRGLHLPAPIITADSWFSDSKLMGHVRHQHQGTFLVEGKVTYTFTL
                     ADGRHVNGHDLLAGEWPWRTHPWEPGVCYVRLQAQSPTYGAVTVVIVDEPGEDRYYLL
                     CLETALSGPVLIRRWRRRHWIEFVFRVLKHLLAAESCQVHSEDAYYGHLVLRLMASFV
                     LFYTSRVVCKGRLTLEEIIFSLKHYWRFVDLEPLELHILS"
BASE COUNT          392 a          496 c          418 g          330 t
ORIGIN      
        1 tgttctatga aagtatgtgt aattccaagg gttccaggtc gacaaagcgc cagtagtgct
       61 tcagactaaa aatgatctcc tccagcgtca gacgaccttt gcagaccaca cgcgaggtgt
      121 agaacaagac aaagctcgcc atcaaccgta acaccagatg cccataatag gcgtcctcgc
      181 tatggacttg gcacgactcg gcggccaata gatgtttcag cacccgaaag acaaattcaa
      241 tccagtggcg tcgtcgccac ctgcgaatca agaccggacc actcagcgcc gtctccaaac
      301 acagcagata gtagcgatct tctccaggct catccacaat caccaccgtg accgcaccgt
      361 acgtggggct ctgagcctgt aagcgaacgt agcacacgcc aggctcccaa ggatgcgtgc
      421 gccaaggcca ctcgcccgca agcaaatcat gcccgttgac gtggcgccca tcggccaagg
      481 tgaaggtata cgtgactttg ccttccacta agaaggtgcc ttgatgctga tgacggacat
      541 gccccatcaa cttggagtca ctgaaccaac tgtctgctgt gataatcggc gcaggcagat
      601 gcaagccgcg cttgcccaaa gccaacaggc gcgcattgat catttctcga gcccagctca
      661 gcttgtcccg gcacggtccg cccacaccga tggggtcagg tcgccgcacg acaaaatcga
      721 ccggcaccac cagcctgcca tcgccaatga ccacgatcaa taaaagcccg tcaatgcccg
      781 aaaggacccg gtgttgctga ccactccacc aatgcccgac taaccccagc tgctcgccat
      841 acttgtggaa gacagaatca tcgacggccc aggtccactg ccagcgactt tgggtcgctt
      901 cgcttttgcc ttcaacatga cgccaaagcg gaaccaacac ttccagcccc aaacgccgca
      961 gccgcttgag ccaggagcgt ttgggcaaag cgtgcaacag acgcgaaggc cagttcttgt
     1021 cccatccccg cacccgacag agctccgaag gcgtacgaca gccaaagagg gcggggaaca
     1081 tgacaccgac gattttgccc aacagcttct gctgactctg taaacggcct tcgatttcgc
     1141 tcaccaaggt ctcaggcagg ccaagctcct ccagggcgtg atgcaaggcc tcggcggcct
     1201 gttgcgcttg gcgacggtcg cgctcgaggc gctgctgagc gttgaggcgg cggcgctgtc
     1261 tggctttggc ttgtttgttg gcgtatcttt tcgctgggga catgatgatc tccttcgtat
     1321 cgcaatccat tcgatacctg tattgatgaa ggaaaccgtg tcccccgcgt ctcgatttca
     1381 gcccgtcatc tcaagggcag cgactcagcc ctcatgtttg cagataagcc tttttttatg
     1441 aatagctttc atgggggatc gagcagaaag ccgcgcccag gctcgctaaa attgaagttc
     1501 ggaaaagtca gtcgtttatg ccgaaggtac aaggtgtcta aggatgttcg atcgtatgat
     1561 cacatggttt gcgcataggg tggtcatgac ctaccagctt tacgtcttca aaaagacggc
     1621 aaaaaacata ccacct
//
LOCUS       DASQSL010001862         1307 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_80833, whole genome shotgun sequence.
ACCESSION   DASQSL010001862 DASQSL010000000
VERSION     DASQSL010001862.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1307
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80833"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1056
                     /locus_tag="VE844_18745"
     CDS             <1..1056
                     /locus_tag="VE844_18745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019009873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 43 glycosylhydrolase"
                     /protein_id="HZC03311.1"
                     /translation="ATNCCNGPLTGYSVFVGRSKDPTGPFVDREGISLLDSRVGGTPV
                     ISMNGNRWVGPGHNTVFTDWDGQDWTIYHAIDRNDPYFSDPNPLRINKRHAMLDPMDW
                     IDGWPTVRGGRWASDRPQPSPAAQPGEKSQYEAQAPPEQQPGSLINQLSDEFDTDTLK
                     PQWTWVREPVADRYRITDDVFEFDTQAADLFVDSNNASVLTEAAPEENYLVETRVRLD
                     LPSEGCCFNFVQAGLVIYGDDDNFIKLTHASIWETRQTEFAKELFPVPQDYPRYGNTV
                     IGPPEEWTYLRIVKERRASEDRYTAYTSRDGETWVRGGTWTHDLGRNAQIGLVAMGGT
                     GFMADFDYVRVYHLERS"
BASE COUNT          270 a          371 c          399 g          267 t
ORIGIN      
        1 gccaccaact gctgcaacgg ccctctcacc ggctacagcg tctttgttgg ccgctcgaaa
       61 gacccgacgg ggcccttcgt tgatcgtgaa ggtatctcgt tgctggatag ccgcgtgggg
      121 ggcacgccgg tcatcagcat gaacggcaac cgctgggtcg gaccgggcca caacacggtc
      181 tttaccgact gggatgggca agactggacg atctatcacg ccatcgaccg caacgatccg
      241 tacttcagcg atcccaaccc tttgcggatc aataaacggc atgccatgct cgatccgatg
      301 gactggatcg acggctggcc gacggtgcgc ggcgggcggt gggcgtcgga tcggccgcag
      361 ccctcaccgg ccgcccaacc aggggagaag agccagtatg aggcccaagc accgcctgag
      421 cagcaacccg gcagtcttat caatcagctc tccgacgagt tcgacacgga tacgctcaag
      481 ccgcagtgga cctgggtgcg tgagccggtc gccgaccgct accggatcac ggacgacgtc
      541 ttcgagttcg atacccaagc cgccgatcta tttgtggata gtaacaatgc ctcggtgctc
      601 accgaggcgg ccccggaaga aaattacctc gtcgagacgc gcgttaggct ggacctgccg
      661 tcggagggat gctgcttcaa cttcgtgcag gctggcctgg tgatctacgg tgacgacgac
      721 aatttcatca agctgacaca cgcgtcgatt tgggaaaccc gccagacgga gttcgccaaa
      781 gagctgtttc ccgtgccgca ggattacccg cgctacggca acaccgtcat cggcccgcct
      841 gaggagtgga cttatctccg gatcgtgaaa gagcggcgcg ccagcgagga tcgctatacc
      901 gcctatacga gccgcgacgg cgagacttgg gtgcgcggcg ggacgtggac gcacgatcta
      961 gggcgcaacg cgcagatcgg gttggttgca atgggcggaa cgggctttat ggccgacttc
     1021 gactacgtcc gtgtgtacca tctagagcgc agttaagctg ctggtgcgat aacggaaaag
     1081 ccgtcaagtg tggcaatgtt ggtgaactgc tgtttcggct atcaagtgga aagccaatga
     1141 cttgagtttg tgggctctgt tgcattaacg tgagcagaat gtgattcttg ttggcaatta
     1201 atctgagttc gggagacctc tcgtttgcaa gcacaaccgg ttaagttggc gattcgctac
     1261 acctaccttt acattccttg attttgctcg tagttgtatc ggatgtt
//
LOCUS       DASQSL010001863         2632 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_172809, whole genome shotgun sequence.
ACCESSION   DASQSL010001863 DASQSL010000000
VERSION     DASQSL010001863.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2632
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172809"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            136..636
                     /locus_tag="VE844_18750"
                     /pseudo
     CDS             136..636
                     /locus_tag="VE844_18750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005007074.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
     gene            complement(671..1915)
                     /locus_tag="VE844_18755"
     CDS             complement(671..1915)
                     /locus_tag="VE844_18755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013156567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
                     /protein_id="HZC03312.1"
                     /translation="MSQKITEQISTSSGMWEGLEALVREQVQRLIQALLEEEVTAFLG
                     RPKSTRRAAVDAPQGYRNGHGKPRRWAMTVGTITVRRPRMRGLAARFVSRVLPLFQRR
                     TRVLGELLPRLYLHGLALGDFDLALRGLLGDAAPLSPASLVRLKAQWQLAYEAWKRRQ
                     LDDLEVVYVWADGLYVKAGLEDTKAALLVMIGALTNGQKVVLAVESGQRESHESWGAV
                     LRDLRARGLQPWCCTIADGHLGLWAAMAEQQPSAAEQRCWNHRITNVLDAVPTKHQAQ
                     ARTLLCAMPYAESRTACEALQGQFVKRYHQLAPKAVERLEHDWGRLITFYQFPREPWR
                     HLRTTNVVESPFAAVRLRTTAAKRFKKVDSATAIIWKLLQVAETTFRRLNAPELLPAV
                     YAGARYVDGVKHTAVGHQEVAA"
     gene            2183..2371
                     /locus_tag="VE844_18760"
     CDS             2183..2371
                     /locus_tag="VE844_18760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03313.1"
                     /translation="MTWHELYTALEHADPASEVLVVLYQLNGTSRVFAVEEAQDTRGY
                     VKLDIYEDEPVYEEHPEG"
BASE COUNT          554 a          781 c          735 g          562 t
ORIGIN      
        1 aacaataggt ctggcaagct cagccagctt cacaagcgct acatctgcaa acaactacaa
       61 ctgtttcttc tctaataaag gctggtagga aaacagccga cgcggcatat agtgtcatgc
      121 cagggagtgt gatgtatggc aagaatcgat gcgtttttta aactcgtgac cgacctcggg
      181 gcttcggatc tgcacgtggt cgccggttct cagccggtct tgcggattcg aggcgatatg
      241 gagcgtgtca aatataaaat ccttgatgat aatgaactta catcgatgct gtatgaaatt
      301 acccctgagg agaaaatcaa agttttcgag gagaccggtg atatcgattt cgcgtatgag
      361 ttaccgggac tagctcgctt ccgtgccaac tttttccgcc agctgaatga tatcggtgct
      421 gtcttccgtc ttattccgag taacgttatg accgccgatc aactcggtct ccctccaggc
      481 atcacacaac ttgccatgct ccataagggg cttgttttgg taaccggtcc gacgggaagt
      541 ggaaaatcaa ccacgcttgc tgccatcgta gattatgcca ataagcatcg caaggatcat
      601 atcattacgg ttgaagaccc tgtagaattc gtccaccaca gaggtcttgt caataagtgt
      661 gtaaaaggag tcaggcggcg acctcctgat gaccgacagc cgtgtgcttc acaccatcca
      721 cataccgcgc gccagcatag accgctggca gtaactccgg ggcattgagc cgccggaaag
      781 tcgtctcagc aacctggagc agtttccaga tgatggctgt ggccgagtca accttcttga
      841 aacgcttggc ggcggtggtg cgcagccgta ctgctgcaaa gggcgactcg accacgttcg
      901 tcgtccgcag atggcgccaa ggttcccggg ggaactggta gaaggtgatc aaccgccccc
      961 aatcgtgttc taggcgctcg acagcctttg gcgccagctg gtgataacgc ttgacgaact
     1021 ggccctgcag cgcctcgcat gccgtccggc tttcggcata cggcatggca cagaggagcg
     1081 ttcgggcttg agcttggtgc ttggtcggaa cggcatccaa tacattcgtg atccgatggt
     1141 tccagcagcg ttgctcggcc gcgctcggct gctgctcggc catggccgcc cagaggccca
     1201 ggtggccgtc ggcaatcgta caacaccacg gttgcaggcc acgggcgcgc aaatcgcgga
     1261 gtactgcccc ccacgattcg tgcgattccc gctgaccgct ctctaccgcg agcacgacct
     1321 tttggccatt ggtgagggca ccgatcatga ccaggagcgc cgccttcgtg tcttcgagcc
     1381 ccgctttcac atacaggcca tcggcccaca cgtacaccac ctccagatca tcgagctgcc
     1441 gccgcttcca tgcttcgtat gcgagttgcc actgggcctt gaggcggacc agtgaggccg
     1501 gcgatagcgg ggccgcatcg cccaagagcc cccggagggc caggtcaaag tcaccgagcg
     1561 ccagcccgtg caggtacaac cgcggcaaga gctcgcccag cacgcgcgtc cgccgctgga
     1621 acaacggcag cacccgactg acaaagcgtg ccgccagacc gcgcatccga ggccggcgga
     1681 ccgtgatggt ccccacggtc atggcccacc gtcggggttt tccgtgccca ttgcgatacc
     1741 cctggggcgc atccaccgcg gctcgtcgcg tggatttcgg ccgtccgagg aacgcggtga
     1801 cttcctcctc caataaggcc tggatcaacc gttgcacctg ctcccggacc aacgcctcca
     1861 acccctccca catgccactt gacgtcgata tctgctccgt gatcttctgt gacatggcgg
     1921 tgtctccttt ctgtaccggg cctctgcccg gtgggtgtgg ttacccgaga ggatataccg
     1981 ccttccttct atttccacac tttttggtta tacctccatg cacgcccaag cgttcaattc
     2041 ccgacaggcc aattttctct gcataggctt gcaggacagt ggcgcggttc tgcgctctct
     2101 gctaactatg tagggcaaat cagactgtta cgaggaagat gcgcgacagc gatgacaagc
     2161 catctaggcc agggagcgca ccatgacatg gcacgaactc tataccgcat tggaacacgc
     2221 ggatccagct agcgaagtac tcgtggtcct ctatcaactg aatgggacga gccgggtgtt
     2281 tgcggtcgag gaggcgcagg atactcgagg gtatgtcaag ctcgacatct atgaggacga
     2341 acccgtgtat gaggagcatc cggagggcta acagccatgg ccaacggatc atccccgctt
     2401 cagttcgaag acgtcccgct taccccacag cgtctgcagt gtcgtgacgc ctaacgttga
     2461 aatactaaat cgatccacat gacattggta cacattggtt tcctgaagcc ctagttgggg
     2521 cggcatcccg gtgagcccaa ctgtgccaat cttgtatgga ctgatttagg tatggtgagc
     2581 ctggcttcct ggggacttca aggtgctcta cctgcaggtg tagggaatag gg
//
LOCUS       DASQSL010001864         1286 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_107694, whole genome shotgun sequence.
ACCESSION   DASQSL010001864 DASQSL010000000
VERSION     DASQSL010001864.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107694"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(13..594)
                     /locus_tag="VE844_18765"
     CDS             complement(13..594)
                     /locus_tag="VE844_18765"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HZC03314.1"
                     /translation="MSAEENKAVVRRYIEEAFNQGNLDVLDEVIATDGVHYANVREEP
                     VRGPEQRRQAVSHWREAFPDLHMTLDDLIAEGEKVSYRWTARGTHQGEFLGIASSGKQ
                     MTTRGIVIERLANGKFTEGWTSSDTLGLMRQLGGIPERGDSEEHLLLLADQVRHRTLP
                     ITGLFTQVRGTGILGSSPLRRCVRMPLTSCQAA"
     gene            complement(850..>1286)
                     /locus_tag="VE844_18770"
     CDS             complement(850..>1286)
                     /locus_tag="VE844_18770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03315.1"
                     /translation="PSIRCGATTLQTAIGAVPFHTHGSSSHEARYPGRSWGGGVGVPS
                     LAVSRGTGNVRVAGIFSEETFAFSPGRVPAPQVDDQDAAKGPVFDPVHTFHLGVWFSE
                     PAQAKKAGCSNTVTPLDGDHEAGIQALSTQNFKQLGPLSRIK"
BASE COUNT          228 a          409 c          360 g          289 t
ORIGIN      
        1 tccggctgat gctcaagcgg cttggcagga agtgagcggc attctcacac accttcttaa
       61 aggcgaactt ccgagaattc ctgttccacg cacttgggtg aataggcccg ttatgggaag
      121 tgtgcggtgt ctaacctggt cggctaggag gaggaggtgc tcctcagagt ctccccgttc
      181 agggatacct cctagctgac gcatcaggcc cagggtatcc gaactcgtcc agccttccgt
      241 gaacttcccg ttggcaaggc gctcgatcac tatccccctc gtcgtcatct gcttgccgct
      301 tgaggctatc ccgaggaact cgccttggtg cgtccctcgc gcggtccagc ggtacgacac
      361 cttctctccc tcagcgatca agtcatccag ggtcatatga agatctggga aggcctccct
      421 ccaatgagac acggcttgcc ttcgttgctc gggaccgcgc acgggttctt cccgcacgtt
      481 tgcataatgg acgccgtcgg ttgcgatcac ctcatctagc acatccaagt tgccctggtt
      541 gaaagcttct tctatgtagc ggcggacaac ggccttattt tcttctgccg acataggaca
      601 gcctcctctt tctccgcgct tgcccggcag gcaaatacac aaccaacgat gatgcttcct
      661 tgcctagcat ggcctagcct ggcgcatctc tcgaatggtt ttggggctct tcgggagcga
      721 actttcgata acaccccttc cacgcgcttc ggtggaaaag gagcaatcgg cccggaaggg
      781 aggcaacttc tctgcaccga gcagcgatcg cctcccctcc gcctagacag aacctggcct
      841 cctatttacc tacttgatcc tgctcagggg gcctagttgt ttgaagtttt gggtgcttag
      901 cgcctggatg cctgcctcgt ggtccccgtc aagcggcgtg acagtattcg agcagcccgc
      961 cttcttggct tgcgctggct cagagaacca caccccaagg tggaaggtgt gcaccgggtc
     1021 gaacactggt cccttcgcag cgtcctggtc atccacctgc ggcgctggca cgcgccctgg
     1081 ggagaacgcg aaggtctcct cgctgaagat ccctgcgacg cgcacgttgc ctgtacctcg
     1141 actgaccgcc aagctcggta ccccgacgcc tcctccccag gagcggccgg ggtaccgggc
     1201 ctcgtgggag gacgatccgt gggtgtggaa cggcacggcg cctatagcgg tttgcagtgt
     1261 agttgcccca catcttattg acggta
//
LOCUS       DASQSL010001865         4544 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_150118, whole genome shotgun sequence.
ACCESSION   DASQSL010001865 DASQSL010000000
VERSION     DASQSL010001865.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4544
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150118"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(336..827)
                     /locus_tag="VE844_18775"
     CDS             complement(336..827)
                     /locus_tag="VE844_18775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03316.1"
                     /translation="MRDPQISGWEEVTATLTAYLAACGITERAEVAPLIREIERRVVI
                     RLPLYADESLPAVAIEEAQRLIDQWAIQALGLNYPVASEEVFAARATFLSGTVSGKWS
                     LSPEATLGSLTQALWAVRVVPIPPKSELTIEIQPLEIGYWKLSTLLKYELRRLIRYFC
                     RRE"
     gene            complement(890..2461)
                     /locus_tag="VE844_18780"
     CDS             complement(890..2461)
                     /locus_tag="VE844_18780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014777780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucan biosynthesis protein"
                     /protein_id="HZC03317.1"
                     /translation="MQFGGALNVHVALLGCLILAVGINAVDAAEDLKPEAISQEPRIQ
                     FGFADVHRRAQELAAGPFAADRPELPGAFQGLSYDQYRDIRFRPERAVWRGEGLPFQV
                     QLFPRGFMFLDRVKVNIIDSGEAVPIAFSRALFDYGRNPVPEELPADIGFAGLRFFYP
                     LHRDDHFDEVAVFLGASYFRAIGQNQTYGLSARGLAIDTGLASQEEFPLFREFWLEKP
                     DKDATELTLYALMDSRRATGAYRFVIRPGLQTVMEMKAHIFMRERVEKLGVAPLTSMF
                     YHGELTERYMADFRPEVHDSEGLLVETGNGERIWRPLINPRRLRISTFQVTDPKGFGL
                     FQRDRVFDHYQDLEAHYHRRPSAWVEPLGQWGQGRVELVEIPSSSERYDNIVVFWVPA
                     KPTEAGQGLEFDYRIRFALDPEARLRGGRTIATRIGAGGTDEPQPDRRKFVIDFVGEN
                     LKGLEAEPPVEAVVNASSGKIINAVAEENPYTGGWRAFFELVPDSDQPVDLRCFLKRG
                     PDVLTETWSFQWMRD"
     gene            complement(2485..3858)
                     /locus_tag="VE844_18785"
     CDS             complement(2485..3858)
                     /locus_tag="VE844_18785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008448637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpoVR family protein"
                     /protein_id="HZC03318.1"
                     /translation="MAATLRSYAAQLEDMARGFGLDFYPLEFEAVPPSFMMEVAVYGL
                     PVRMPHWSFGVRYIYQLIQHQMGYSRIFEVVFPGNPGRAYLSNTNTVHENTLVVAHVL
                     GHADFAKNNLLFKHAQEQVGFHIVEQAAVHAHHIEEAIAKFGQKRVERVLDAALALEQ
                     HIDDHQLLMRPLYQGLARPPEKQPPRGFHKRFSTLPGEALPKAPSSEHERLLIPPHPE
                     YDLLWFIAHYAPAMEDWERDIFLAVREESFYFYPVFSCTIMNEGWASYWHARLLREAA
                     FLPSDLYVDALKAHSDVVRPFAGDHQIALSINPYHLGFVLWDRIIEAQGLEHAWRIRQ
                     EDDDSSFIRNHLDAKLAHELGLFVHTTKRNGEIRVDQWDIDALHEAILMPKYNFGAPT
                     IAVSELDLDGTLELKHNHLIDGRGLDIDYARRVLEYIQRVWRRSVVLYTVDTRGKEIM
                     LRVDGED"
     gene            complement(3862..>4544)
                     /locus_tag="VE844_18790"
     CDS             complement(3862..>4544)
                     /locus_tag="VE844_18790"
                     /inference="COORDINATES: protein motif:HMM:NF016195.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF444 family protein"
                     /protein_id="HZC03319.1"
                     /translation="SRLDRRRTLKEAIKRRAIQENGPEFTNEDLRFRQLARRQRPVTS
                     AVVFFVLDASSSMEEHDRKLAKTFFFWALQGLRRQYMRIGTVFIAHTVSAWEFSEEAF
                     FQVAAAGGTQASSAFELTLDILRTRYDPNRYNGYLFYASDGDNFTEDREAAETALKQL
                     SELLNFMGYVEIVHGRSRPLDTQMGALFGDLEREHLPVGSYPIAGHENIWPSIRKFFK
                     QQSSQEVA"
BASE COUNT         1059 a         1343 c         1205 g          937 t
ORIGIN      
        1 tgagcaatgc cgtacgggta ggacccaggg ggggtccctg gaccctgtct cccccaggca
       61 tggtggtgat agcccagcgc ctgatccggc ataacaagac caaaaacccc acgctggccg
      121 tccaaaatga agtgcatatc caggcgaata ggatcgtgta aagcagcagc aacagcaatt
      181 ccagagggtt gataccatcc acttgaaagg cgccactcaa gagcgccatt gccccaaggg
      241 tggtggaaaa gaccagcact ccaaggatca gacggcggcc gtgggccccc gatcgccttc
      301 tggaacggtg tggatagctg gggggatcag gggaactact cacggcggca gaagtatcgg
      361 atcaagcggc gcaattcgta tttcaggagg gtgctcagtt tccaatagcc tatctcgagg
      421 ggttggatct ctatagttaa ctcacttttt ggggggattg gcacgaccct gaccgcccat
      481 aacgcctgag tcaggctccc gagtgtagcc tcagggctta gagaccattt ccccgagacc
      541 gtgcccgaga ggaacgtcgc ccgggctgca aatacctctt ccgaggccac cggataattc
      601 aatccaagtg cttgtatggc ccactgatcg atgagtcttt gggcctcttc tatggccacc
      661 gccggcaggg attcatcggc atacagtgga agccggatga ctacccggcg ttcgatctcc
      721 cggatcaaag gagccacctc ggcacgctcg gtgatcccgc aggcagccag ataagccgtg
      781 agcgttgccg tcacctcctc ccatccagag atttgaggat cccgcaccac tccatccgct
      841 atacgatcac tttccctgtt agaagggtgt tgtgaggctt gtgcgtattt caatcccgca
      901 tccactggaa gctccacgtc tcagtgagca catctggccc tcgttttaag aagcagcgca
      961 gatcgaccgg ctgatccgaa tcgggtacga gctcaaaaaa cgcccgccag ccccccgtat
     1021 acggattttc ctccgccacc gcattgatga tcttccctga agaagcgttg accaccgcct
     1081 ccacaggcgg ctcagcctca agccccttga ggttctcgcc gacaaagtcg atgacgaact
     1141 tccgtctatc gggttggggt tcatcggtac ctcccgcgcc gatacgggta gcgatagtcc
     1201 ggcccccccg cagacgcgcc tccgggtcca gggcaaagcg gatccgatag tcaaactcga
     1261 gtccttgccc cgcctcggtg ggctttgcag gtacccagaa caccacgata ttgtcatagc
     1321 gctccgagct gctcgggatc tcaacgagtt ccacccggcc ctggccccac tggcctagag
     1381 gttcaaccca ggcgctcggg cgtctatggt aatgcgcctc tagatcctga tagtgatcaa
     1441 acacgcggtc tcgctgaaac agcccaaaac ctttgggatc agtcacctgg aaggtgctga
     1501 tgcggagcct gcgtgggttt attaaggggc gccagatccg ctcgccattg cctgtctcaa
     1561 ccagcaggcc ctccgagtca tgcacctcag gacgaaaatc agccatgtag cgctctgtca
     1621 gttccccatg gtagaacata ctggtcaggg gagccacacc gagcttctct acccgctcgc
     1681 gcataaagat atgggccttc atctccatga cggtctgtag accaggcctg atcacaaacc
     1741 ggtaagcgcc agtcgcccgc cggctgtcca tcagcgcata gagtgtgagt tccgtggcat
     1801 ccttatcggg cttttcgagc cagaattcac gaaatagcgg aaattcctct tggctagcga
     1861 gccccgtgtc aatcgcaagc ccccgcgctg agagaccata ggtctggttc tgaccgatgg
     1921 cgcggaaata actggcgccc aggaataccg ccacctcatc gaagtgatca tcgcggtgca
     1981 agggataaaa gaaccgcaga cccgcgaagc cgatgtccgc gggaagctct tcaggtactg
     2041 gattgcggcc ataatcgaat aacgcccggc taaaggctat agggactgct tcaccgctat
     2101 cgataatatt taccttaacg cggtcgagaa acataaagcc gcgcgggaag agttgcactt
     2161 gaaacggcaa gccctctccc cgccatacgg ctcgctcagg gcggaaacga atatcccgat
     2221 actgatcata tgacaaccct tggaaggccc ccggtaactc gggccgatcc gctgcaaacg
     2281 gccctgctgc caattcctgt gcacgccggt gcacatctgc aaaaccaaat tggatccgtg
     2341 gctcctgtga aattgcttca ggctttaaat cctctgccgc atcgacagca ttgatcccta
     2401 ccgccagaat taaacatccg agtaatgcca catgcacgtt caaggcgccc ccgaattgca
     2461 ttgcagcaaa gctcagcgct cggctcagtc ctcgccatcg acccttagca tgatctcctt
     2521 gccgcgggta tccaccgtat agagcacaac cgaacggcgc catacacgct gaatatattc
     2581 gagcaccctg cgggcatagt ctatatccaa tccccgtcca tcgatcaaat ggttatgctt
     2641 gagctccagc gtcccgtcga gatcgagttc ggataccgca atggtcggtg cgccgaaatt
     2701 gtacttgggc atcaggatag cctcatgcaa ggcatcgata tcccactgat ccacccggat
     2761 ctccccattg cgcttagtgg tatgcacaaa taacccaagt tcatgcgcca atttggcatc
     2821 cagatgatta cggataaagc tggaatcatc gtcttcctgc ctgatccgcc aggcatgctc
     2881 aagtccctgg gcttcaatga tcctatccca aagaacaaat cccaaatgat aaggattgat
     2941 cgaaagggcg atctgatggt cgcctgcaaa aggacggact acatcggaat gtgctttgag
     3001 ggcatcgaca tagagatcgc tcggcagaaa agcggcctcc cgcagtagcc gggcatgcca
     3061 ataggaagcc cagccttcgt tcataatagt acaggagaac accggataaa aataaaaaga
     3121 ttcttcccgc accgccagaa agatatcccg ctcccagtct tccatagcgg gggcataatg
     3181 ggcgatgaac caaagtagat catattcggg gtgcggcggg atcaggagac gttcatgttc
     3241 ggatgaagga gctttaggca gggcctcgcc cggtagggtg ctgaagcgtt tatgaaatcc
     3301 ccggggcggc tgtttctccg gcggccttgc aagtccttgg tacaggggcc gcattagcag
     3361 ctggtggtca tcgatatgct gttccagcgc gagcgccgca tcgaggaccc tttcgacccg
     3421 cttctgccca aatttggcaa tggcctcttc aatatgatgc gcatgcaccg ctgcctgttc
     3481 tacgatgtga aatcctactt gttcctgggc atgtttgaac aacaggttgt tcttggcaaa
     3541 gtcggcatga cccaatacat gggctaccac cagggtattc tcatgcacgg tgttggtgtt
     3601 ggaaagataa gcccgtccgg gattacccgg gaagaccacc tcaaagatcc gcgagtatcc
     3661 catctgatgc tggatcaatt gatagatgta gcgtacccca aacgaccagt gtggcatacg
     3721 cacaggcagc ccgtataccg ccacttccat cataaaactg ggcggcacgg cttcaaactc
     3781 gagcggataa aaatcaagcc caaaacctcg agccatatcc tcgagttggg cggcatagga
     3841 gcgcagtgta gcagccatct tctaggctac ctcttggctc gactgctgct tgaagaactt
     3901 acggatgctg ggccagatat tctcatgccc ggcgatagga taactgccca ccggcagatg
     3961 ttcccgctcc aagtccccaa ataaagctcc catctgggta tccagcggtc gcgaccggcc
     4021 atgtacgatc tctacgtagc ccatgaagtt gagtagctca ctgagctgtt tcaaggccgt
     4081 ttcggccgct tcacgatcct cggtgaaatt gtcgccatcc gaggcgtaaa acaggtagcc
     4141 attataacgg ttgggatcat agcgtgtccg caagatatcc agggtaagct caaaggcgct
     4201 tgaagcctgg gtcccgccgg ctgctgcaac ctggaagaag gcctcttcgg aaaattccca
     4261 ggcgctgacc gtatgggcga taaacactgt gccgatccgc atgtattggc ggcgaagtcc
     4321 ctgcaaggcc cagaaaaaga aggtcttggc caatttacga tcgtgttctt ccatgctgga
     4381 agaggcgtcg agcacaaaaa acaccaccgc gctggtaacc ggcctctggc gccgcgccaa
     4441 ttggcgaaac cgcagatcct cattggtgaa ctcggggcca ttttcctgga tagcccgccg
     4501 ttttatcgcc tccttcaggg tacgccggcg gtcgagacgc gaac
//
LOCUS       DASQSL010001866         3118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_200439, whole genome shotgun sequence.
ACCESSION   DASQSL010001866 DASQSL010000000
VERSION     DASQSL010001866.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3118
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200439"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            274..492
                     /locus_tag="VE844_18795"
     CDS             274..492
                     /locus_tag="VE844_18795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03320.1"
                     /translation="MQPRRIAINYSNARTLAASIGFCGLVLTLALPAPRLALAQESSA
                     IATADAQTPGIRAEVRELKRSSSGILTL"
     gene            525..1262
                     /locus_tag="VE844_18800"
     CDS             525..1262
                     /locus_tag="VE844_18800"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013250452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HZC03321.1"
                     /translation="MIPLRDNIPLKIVPIITRATVVICVLVFLWQLGQGKIGFWLLPY
                     SFGVIPAILGGDHSLPPELSRVPPEMTLLTYMFLHGGWMHLIGNMLYLWIFGDNVEEA
                     LGHGRFLVFYLLCGIAAALGQAQLQPGSEVPMIGASGAVSGVLGAYALLYPHAQVLIV
                     IPFGFFAKLMHMPAIILLGLWFVFQVLNSLWEGLHVGGIAWFAHIGGFIAGLVLVPFF
                     KRRHVRLFPPSRPNQDDKNQDDRPQAG"
     gene            1340..3103
                     /gene="icd"
                     /locus_tag="VE844_18805"
     CDS             1340..3103
                     /gene="icd"
                     /locus_tag="VE844_18805"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006914354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate dehydrogenase (NADP(+))"
                     /protein_id="HZC03322.1"
                     /translation="MAYQHIKYPQGGEKIQAEQGKLVVPAHPVIGFVEGDGIGPDIMR
                     ACLRIWDAAVEQAYGGKRKIHWMELFMGEKAAERYDGNFFPDETLEAMQDLLISIKGP
                     LTTPVGGGFRSLNVALRQDLDLYACVRPVRYYPGVPSPLRRPELVDVVIFRENTEDVY
                     AGIEYKSGSPEAEKVARFLREEMKAEFFESSGIGVKPISPFASKRLVRKAIQYALDHG
                     RESVTLVHKGNIQKYTEGAFRNWGYELAREEFGECTLTEEELYSSYGGKQPEGKIVIK
                     DRIADIMFQLMLIRPEEFDVIATTNLNGDYLSDAIAAEVGGVGIAPGANMADFVAVFE
                     ATHGTAPKYANLDKVNPGSLLFSGVMMLEYIGWQEAADLITLAYPEVVQKRIVTYDFA
                     RLMEGATEVSTSGFATALIERIKGDVEDLEARRKEREHAIERERQEREARRMAEPIAA
                     MKASGRTPHTVGDIMSRIQTIKPGVFVNEVMHTMRANGISSVLVEPGRDGLWAIMTQR
                     DIISRIVHANRSPARVKVEDIASKPLLTVPTDMPLHECASQMVGSNIRRVVVEQNEVP
                     VGIVSDTDIFRIVDEFGWEPT"
BASE COUNT          694 a          830 c          894 g          700 t
ORIGIN      
        1 aaaagcagtc gcgcttcaca gttatcccaa gttgcgtgcc aaaggatgtg cggactaaat
       61 tatgtcttat tctcaatgat ctgaaagccc agaccgcgac agagacgtta gctttttccg
      121 gtttgcccgg taagagttac acaggcttgt aaaaattgca tgagcaagta aaacaactcg
      181 acgggtgcag tgcggctgaa ttcaggcaat taggcaacgg aaggttcgtg gagtagacta
      241 tacgcggtag agtcagccgc tttgaaagat agcatgcaac cgaggagaat cgccataaac
      301 tacagcaacg caagaacact ggcagccagt atcgggtttt gcggtctcgt gctgacgctc
      361 gccctcccgg ccccacggct ggcactggcg caggaaagca gcgccatcgc cacagcggat
      421 gcgcagactc ccggcataag ggccgaggta cgggagctca aacggagcag cagtggcatc
      481 ctgactctgt agagatcatt gtgggcaagt aaagcaaccc atccatgatc ccccttcgcg
      541 acaatatccc cctcaagata gtacccatca tcacccgggc gacggtggtt atatgtgtgt
      601 tggtattcct ctggcaactc ggacagggga agatcggttt ctggcttcta ccctacagct
      661 ttggtgtcat accggcgatc cttggaggag atcacagttt gcctcctgaa ctcagccggg
      721 tgcctccaga aatgacactc ctgacctaca tgttcctgca tggaggatgg atgcatttga
      781 tcggcaatat gctctatctt tggatcttcg gtgataatgt cgaggaggcg ttgggtcatg
      841 ggcggttttt ggtgttttat ctgctctgcg gcattgctgc tgcgctcggc caagcacagc
      901 ttcagcctgg ctctgaagtc cccatgatcg gggcgagcgg ggctgtctcc ggcgtgcttg
      961 gagcttatgc cttgctctac ccgcatgctc aggtgctgat cgtcatcccg tttggattct
     1021 tcgccaaact tatgcacatg ccggcaatca ttctccttgg cctatggttt gtattccagg
     1081 tgctcaactc actctgggaa ggccttcatg tgggcggcat agcctggttc gctcacattg
     1141 gtggctttat cgcgggcctg gtattggttc cctttttcaa gcgccgccat gtccggctat
     1201 ttccgcccag ccgccctaat caggacgata agaaccaaga tgatcgaccg caagcgggtt
     1261 aaactaccgg ctagcgataa caggatctac gcagttacaa taggttttgt cgaatagtct
     1321 ctcaggtgga gggaagagta tggcttatca gcatatcaag tatccccaag gcggtgagaa
     1381 gatccaagcc gagcagggaa aacttgtagt accggctcat cccgtgattg ggtttgtgga
     1441 aggggatggg atcggccccg atattatgcg cgcctgcctg cgtatctggg atgccgctgt
     1501 ggaacaggcc tatggcggca agcggaagat ccactggatg gagcttttta tgggtgaaaa
     1561 ggcggccgaa agatatgacg gcaacttctt tcccgatgaa acccttgagg ctatgcaaga
     1621 cctgctcatt tcgatcaaag gaccgcttac gacccccgtg ggtggcggtt tccgctcctt
     1681 gaatgtggcg ctgcgtcagg acctggatct ctatgcctgt gtacggccgg tgcgctacta
     1741 tcccggtgtg ccctcgcccc tgcgccgtcc tgagctggtc gatgtcgtca tcttccggga
     1801 gaataccgaa gacgtctatg ccggtatcga atataaatcg gggtctcccg aagccgagaa
     1861 ggtcgcccgg ttcttgcggg aagagatgaa ggccgagttc tttgaaagct ccgggatcgg
     1921 cgtcaaaccg atcagcccct tcgctagcaa gcggctggtt cgcaaggcca tccagtatgc
     1981 cctggatcac gggcgcgaga gtgtaacgct ggtacataag ggtaatattc agaaatacac
     2041 cgagggtgcc ttccgcaatt ggggctatga acttgcccgt gaagaattcg gcgagtgcac
     2101 gctcacggaa gaagaactct atagcagcta tggcggcaaa cagcccgagg gcaagatcgt
     2161 catcaaggac cggatcgccg acatcatgtt ccaattgatg ttgatccggc cggaagaatt
     2221 cgatgtcatc gctaccacca atctcaatgg tgattatctt tcggacgcta tcgccgccga
     2281 ggtcggtggc gtcggcatag ccccgggcgc taatatggcc gactttgtag ctgtgtttga
     2341 ggctacccac ggcacagcgc cgaaatacgc caatctcgac aaggttaatc ccggctcgct
     2401 gctgtttagc ggggtcatga tgcttgaata tatcggttgg caagaggcgg ccgatctcat
     2461 caccctcgcc tatcccgagg tcgttcaaaa gagaatcgtg acctatgact ttgcccgtct
     2521 tatggagggc gccacggagg tctccaccag cgggtttgcc acagcgctca tcgaacggat
     2581 caaaggcgat gtggaggacc tcgaggccag gcgcaaagag cgtgagcatg ccatcgagcg
     2641 agaacgccaa gagcgcgagg cacgccggat ggcagagcct attgcagcca tgaaggcctc
     2701 aggtcgcacc ccccatacgg tcggagacat catgagtcgg atccagacca tcaaacctgg
     2761 cgtctttgtc aacgaggtta tgcataccat gcgcgccaac ggtatcagca gtgtgctggt
     2821 cgaaccgggg agagatgggc tttgggcgat tatgacccag cgtgatatca tcagccgtat
     2881 cgtgcatgcc aaccgttcgc ccgcacgggt caaggtggaa gatattgcca gtaagccatt
     2941 gctcaccgtg cctaccgata tgcctttgca cgaatgcgcc tcgcagatgg tcggatcgaa
     3001 tatccgccgg gttgtggtcg aacagaatga ggtccccgtg ggcatcgtca gcgacacgga
     3061 catcttccga atcgtagacg aatttggttg ggaacctacc tagtgctatg ccaacttt
//
LOCUS       DASQSL010001867         1013 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_150139, whole genome shotgun sequence.
ACCESSION   DASQSL010001867 DASQSL010000000
VERSION     DASQSL010001867.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1013
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150139"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(199..>1013)
                     /locus_tag="VE844_18810"
     CDS             complement(199..>1013)
                     /locus_tag="VE844_18810"
                     /inference="COORDINATES: protein motif:HMM:NF016195.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF444 family protein"
                     /protein_id="HZC03323.1"
                     /translation="LALPWLEEKDQQEITTTTYQFDEVRRKGSMANIDKKRTLLENLK
                     RHAAHKQPKVGAFQDGDLRFKVWSVREEYHSNAAVYLLMDRSGSMTTEKKYIAKSFFF
                     WLVRFLRLKYKTVDTVFIAHDTEAQVVPEQDFFTISNSGGTMCSSAYRVALEHLQQHH
                     PRARWNNYVFHFSDGDNWDEDNARCKEVVTQLLDHTTMVGYGEIRYRDEATFYGWVKS
                     FNPAWSTLHKDLSAIAHPRFVTVFIKQKEDVYQALQTFFGKREGAETAPVDA"
BASE COUNT          192 a          289 c          311 g          221 t
ORIGIN      
        1 cagaagtcca gccagctcgg gagggggcct atgcggatgg tgaggctgcc gatgtggcca
       61 cggacttcgc tgatgagggg gccgacaaca aagtataagg cagaggcgac cgctcaggtg
      121 gctcctgctg cggtcggtct cgccacttcg aggcgcacac ggttatggaa gtgccaagcc
      181 tgaccctggg gcgcggacct aggcatccac cggggcagtc tccgctccct cccgcttgcc
      241 aaagaacgtt tgcaacgcct ggtagacgtc ttccttctgt ttgatgaaga cggtgacaaa
      301 gcgcggatgc gcaatggcac tgaggtcctt gtgcagggtg ctccaggccg gattgaacga
      361 cttcacccag ccatagaagg tggcctcatc gcgatagcgg atctcaccat acccgaccat
      421 ggttgtgtgg tccaagagct gcgtcaccac ctccttacag cgtgcattgt cttcatccca
      481 gttatcgcca tcggaaaagt ggaacacata gttgttccag cgcgcccgcg ggtggtgctg
      541 ctgcagatgc tccagggcca cacggtacgc ggaggaacac atcgtgccgc cgctgttgct
      601 gatggtgaag aagtcttgct cggggaccac ctgggcctcg gtatcgtggg cgatgaacac
      661 cgtatccacg gttttgtatt tgagccggag gaaacggacc agccagaaga aaaagctctt
      721 ggcgatgtat ttcttctcgg tcgtcatcga gccgctacgg tccatcagca ggtagaccgc
      781 cgcgttggaa tggtattctt cgcgcacgct ccacactttg aaacgcaggt cgccgtcctg
      841 aaacgccccg acttttggct gcttatgcgc ggcgtggcgt ttcaggtttt cgagcagggt
      901 acgcttcttg tcgatgttgg ccatcgagcc cttgcggcgc acctcgtcga actgataggt
      961 ggtggtggtg atctcctgct gatctttctc ttcgagccac ggcagtgcca gat
//
LOCUS       DASQSL010001868         1218 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_80881, whole genome shotgun sequence.
ACCESSION   DASQSL010001868 DASQSL010000000
VERSION     DASQSL010001868.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1218)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1218)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1218
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80881"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..490)
                     /locus_tag="VE844_18815"
     CDS             complement(<1..490)
                     /locus_tag="VE844_18815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03324.1"
                     /translation="MSQHAKELSANLKKAMRRFGRQCRGQGKVFVKWVRETERHLLAL
                     GAPIETWTEQARQCLCQDSTRSQAQRERLLRDLEAASAAHRHITKQSQRLTQGKKLAH
                     CKIVNAYALPIAPIIKGKSNCPAQFGRKSGILSEPASGFIFANQVPAGNPSDPSYVVP
                     LLD"
     gene            complement(487..1089)
                     /locus_tag="VE844_18820"
     CDS             complement(487..1089)
                     /locus_tag="VE844_18820"
                     /inference="COORDINATES: protein motif:HMM:NF017416.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03325.1"
                     /translation="MGILRHLQHWLSGRGPQLLTTEFVPETNAIRLWADTFPWDALVE
                     AVEQSLARRFPKKRPQGGRPAVSDRVLLALELLKHELGASDEDICQRLRTDVAVMYAC
                     GLREVHVDRSQAHFVLPETLAQFRQRIDPELMDELLAIQAAAAMQEGLVSPAHLLVDT
                     FPSEQGSQRVTDATTLYKAQKDSSGSSRRSRAQAHRRPRP"
BASE COUNT          236 a          328 c          395 g          259 t
ORIGIN      
        1 tgtcaagcag gggcaccaca tagctcgggt cactaggatt gcccgcgggc acctggttgg
       61 caaagataaa gccggaggct ggctcagaca ggatgccgct cttgcggcca aactgggcgg
      121 ggcagttgct tttgcctttg atgatggggg caatggggag ggcatacgca ttgacgattt
      181 tgcagtgggc cagttttttg ccttgtgtga ggcgctgcga ttgcttggtg atgtgccgat
      241 gggcggcact ggcggcctcc aggtcacgaa gcagacgctc gcgttgagcc tggctgcggg
      301 tgctgtcttg gcataggcat tgcctggctt gctcagtcca ggtctcaatg ggcgccccca
      361 gggctaacaa gtgccgttcg gtttcgcgca cccacttgac gaagaccttg ccctggcctc
      421 ggcactggcg gccaaagcga cgcatggctt ttttcaggtt cgcactcaac tccttggcgt
      481 gctgactcaa ggtctgggtc ggcggtgtgc ctgggcgcgt gatcgcctcg atgagccgga
      541 ggagtctttt tgagccttgt aaagcgtggt ggcgtcggtg acacgctggc tgccttgctc
      601 agaggggaag gtgtcgacga ggagatgggc cggactgacc aggccctctt gcatggcggc
      661 agccgcttgg atggcaagca gttcatccat caactcggga tcaatgcgct ggcgaaactg
      721 ggccagggtt tcgggtagga caaagtgagc ttgcgagcga tccacgtgaa cctcacgcag
      781 tccacaggcg tacatcaccg ccacatcggt gcgcaagcgc tggcagatgt cttcatcgga
      841 agcacccagt tcgtgtttga gcagttccaa ggcgagcaac acccggtctg ataccgcagg
      901 ccgaccgcct tgaggacgct ttttgggaaa gcgacgagcc aagctttgct ccacggcctc
      961 aactagggca tcccatggga aggtgtccgc ccacaggcgg atggcatttg tctctgggac
     1021 aaactcggtg gtcaggagct gaggaccgcg tccgcttaac caatgttgca ggtgacgcaa
     1081 gatacccatg ggtggccctc cttttgataa ttgcctgtga gagcctcagg atacgagggg
     1141 atacgcttgg aaacaacccg gccccttaaa cgaacggggc gattaaatta gtgcccacta
     1201 agtaaacaga ctcttttg
//
LOCUS       DASQSL010001869         1706 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_172844, whole genome shotgun sequence.
ACCESSION   DASQSL010001869 DASQSL010000000
VERSION     DASQSL010001869.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172844"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            120..623
                     /locus_tag="VE844_18825"
     CDS             120..623
                     /locus_tag="VE844_18825"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HZC03326.1"
                     /translation="MARVCTVANHLQVEEIDRRIQNAKVGWHARRWMIIRQGLVEPQP
                     AGVLASRFGVRPQTVRNWLSAYRQRGPAGVETPGRGQRQRAYLSLEQERKLLESFYPQ
                     SVAGHVSTGRGVKAVLEQEVGHAVAKSTVYRLMKRHQWRKVVPRPRHPQGTAEKQETF
                     KKTSPRK"
     gene            665..1183
                     /locus_tag="VE844_18830"
     CDS             665..1183
                     /locus_tag="VE844_18830"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC03327.1"
                     /translation="MLLMAEDEGRFGRIDRPRRCWAPKPIRPQVPRQMVREFVYVFAA
                     VCAQLGRLTALILPRANTEMMNLFLEQLAQDFQGYFIILLVDQAGWHRAKGLQVPENI
                     RLLPQPAHSPELNPTEHLWEELREKTLPNHSFPSLDLLIDQLCEGLKELAADEQRVRS
                     MVDFPYMRINTS"
     gene            1219..>1706
                     /locus_tag="VE844_18835"
     CDS             1219..>1706
                     /locus_tag="VE844_18835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03328.1"
                     /translation="MESQAKLEADIQLVQAETEKIRAEIAKMERECEVRKSKLGEFII
                     EGIKVFGALVLGAGGVIAAYSGYQLSEVKKERLELEATKVQEQLAQTTLELNTVVSNR
                     KKAKKILAAMISQLAATRSELDMLNGKLSEAKDRLTPGPTSAALESAIKSTRQLEVEV
                     GAV"
BASE COUNT          409 a          420 c          526 g          351 t
ORIGIN      
        1 ctgcttccat tcggccttgg tcaggttgcg atgcgacgtc tggcaaagga ttgataccaa
       61 gttgcattaa atagggtatt aaactataaa gggatatata cgagttggag gggtctggca
      121 tggcgagggt atgtacagta gcaaaccatt tgcaggtgga agagatcgat aggcgaattc
      181 agaatgcgaa agtgggatgg catgcccggc gctggatgat tatccggcag gggctggtgg
      241 agccgcaacc ggcgggggtg ctggcaagcc gctttggggt gagaccgcag acggtgcgca
      301 attggctttc ggcttaccgg cagcgagggc cagccggggt ggagacaccg ggccgcggac
      361 agcggcagcg ggcctactta agcctggagc aggagcggaa attgctggag agtttctacc
      421 cccagagtgt agctgggcac gtgagcacgg ggcgtggggt caaggcggta ctggagcagg
      481 aagtggggca tgccgtggcc aagagtacgg tatatcggct gatgaagcgc caccaatggc
      541 gcaaggtggt accgcggcct cgccaccccc agggcacggc ggagaagcaa gagacgttta
      601 aaaaaacttc ccccaggaag tagcggcagt cctggccacc cgtccccctg aagatcaacg
      661 gccggtgttg ctcatggccg aagatgaagg gcgctttgga cgcatcgacc gaccccggcg
      721 ttgctgggcg ccgaagccga ttcggcccca ggtgccccgg cagatggtgc gggagtttgt
      781 ttacgtgttt gcggcggtgt gcgcccagct tgggcgactc acagcgctca tcctcccccg
      841 ggccaatacg gagatgatga acctttttct ggagcaactg gcccaagact ttcagggcta
      901 ctttatcatc cttctagttg atcaagcggg ctggcatcga gccaagggtt tgcaagtacc
      961 tgagaatatc cgcctgctcc ctcaaccggc ccacagtcca gaactcaatc ccaccgagca
     1021 tctctgggaa gagcttcgcg agaagacgct tcccaatcac tcctttccct ccttggacct
     1081 tctcatcgat cagctgtgtg agggcctcaa ggagttggcc gctgatgagc agcgggtgcg
     1141 ctccatggtc gattttccct atatgcggat taatacttca taaattgcaa cttgtagtat
     1201 aagggggttc cgatgcccat ggaatcacaa gctaaactcg aagccgatat ccaacttgtc
     1261 caggcggaga cagaaaagat ccgggctgag attgctaaaa tggagaggga atgcgaggtc
     1321 agaaagagca agctaggcga gttcatcata gaggggatca aagtatttgg ggcactggtg
     1381 cttggtgccg gtggtgtgat cgcggcttac agtggctatc agctgtctga agttaagaaa
     1441 gaacggcttg agctcgaagc aacaaaggtt caagaacaac tcgctcaaac gacactagaa
     1501 ctaaacacgg ttgtttctaa tcgcaagaaa gctaaaaaaa tccttgctgc tatgataagt
     1561 caactagctg ctacgcgttc ggaacttgat atgttaaatg ggaaactttc ggaagcgaaa
     1621 gatagattga cgcctggccc tacctctgca gctcttgaga gtgccatcaa gagtactcgc
     1681 cagctcgaag tcgaagtcgg ggctgt
//
LOCUS       DASQSL010001870         1627 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_200478, whole genome shotgun sequence.
ACCESSION   DASQSL010001870 DASQSL010000000
VERSION     DASQSL010001870.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200478"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(57..1478)
                     /locus_tag="VE844_18840"
     CDS             complement(57..1478)
                     /locus_tag="VE844_18840"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HZC03329.1"
                     /translation="MKRYGLLIVDDEKDILRTLSLTFEEEYNVFTASTGMEALKILEQ
                     EDIALILADQRMPEMSGVEFLERTIERHPEIIRMILTGYTDTEALIQAINVGRIYRYI
                     QKPWDRQELKITVKRALECYALTLENQRLIKELEAANERLKDENAYLKQAIDKEVQFD
                     SLIGRSPAMRRVLDLVQKVTNTPVTVLLTGETGTGKSLLAHYIHAHSPRKDKLFIAQN
                     CGALPEALLESEIFGHKRGAFTGAMADKKGLFEVADGGTLFLDEVSEMSPTMQVKFLQ
                     VLQEGKFRRVGDSAYRAVDVRIIAATNKELEAEVKKRNFRADLYYRLNVFPIRLPPLR
                     ERLEDIPPLAEHCLKKHRDKMNRAVIGFTEEAMEYLCEYDYPGNVRELENVIERALIL
                     STGDRIEAGEWLPGLRVSPAERELSKLRQLERDYILERLQARQGNLGLVAKDLEISRT
                     TLWRRMKEYQIEPPGNEGADVSE"
     gene            complement(1444..>1627)
                     /locus_tag="VE844_18845"
     CDS             complement(1444..>1627)
                     /locus_tag="VE844_18845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015139193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZC03330.1"
                     /translation="KPIGKGMGLGLSISYGIIQKHGGRIEVKSETNKGTEFIVELPAR
                     LSGEQHEALRTFNRRR"
BASE COUNT          319 a          484 c          425 g          399 t
ORIGIN      
        1 cgagttggcc gcagtgtagt ccggaacagg aaggcagaga ggatttcaac gtgttttcat
       61 tctgaaacat cggccccctc gttgcctgga ggctcgatct gatactcttt catccgccgc
      121 cacaacgtgg ttcggctgat ctcgagatct ttggcgacca ggccgagatt cccttggcgg
      181 gcttggagcc gttcgaggat gtaatcgcgt tctaactgtc gaagcttgga aagttccctt
      241 tcggccggac taacccgaag gccaggaagc cactcccccg cctcgatccg atcgccggta
      301 ctcaggatca aggcccgctc gatcacattc tcaagctccc gaacattgcc tggataatcg
      361 tactcacaca gatattccat ggcctcttca gtgaatccga tcaccgctcg gttcatcttg
      421 tcgcggtgtt tcttcaggca gtgttcggcc aaagggggaa tatcctccag ccgttcccgc
      481 aaggggggga gccggattgg aaagacattc aaacggtagt acagatcggc ccgaaagttc
      541 cttttcttta cctccgcttc gagctcctta ttggtcgcag cgatgatccg cacatcaacc
      601 gcccggtagg cgctgtcccc cacccgccgg aacttgccct cctgcaagac ttgcaggaac
      661 ttgacctgca tcgtcgggct catctcgctg acctcatcca aaaagagggt tccgccatcg
      721 gccacttcaa acagtccttt cttatcagcc atagccccgg taaaggcccc gcgtttatgg
      781 ccgaagatct cgctctcaag cagcgcctcg ggcagcgccc cacagttttg ggcaatgaag
      841 agcttgtctt tgcggggact gtgggcgtgg atataatggg cgagcaggct cttgccggtg
      901 ccggtctcac cggtcaaaag caccgtcacc ggcgtgttgg tcaccttctg cacaaggtcc
      961 aggacacgcc tcatggcagg gcttctgccg atgaggctgt caaactgcac ctccttatcg
     1021 atggcctgct tcaaataggc gttctcatcc ttgagccgct cattggcagc ctcgagttcc
     1081 ttgatcagcc gctgattctc cagggtcaat gcgtagcatt ccaaggctcg cttcacggtg
     1141 atcttgagct cttggcgatc ccagggtttc tggatatagc ggtagatgcg accaacgttg
     1201 atggcctgga tcaatgcctc ggtatctgta tagccggtga ggatcatacg gatgatctcg
     1261 ggatgcctct cgatggtcct ctccaggaat tcgaccccac tcatctcagg catgcgttga
     1321 tcggcgagga taagggcgat gtcctcttgc tctaggatct tgagggcctc catccccgtt
     1381 gaagcggtaa atacgttgta ctcctcctca aaggttaggg agagggtccg caagatgtct
     1441 ttttcatcgt ctacgattaa aagtccgtaa cgcttcatgc tgttctccac tcaaacgcgc
     1501 cggcagctca acgatgaact ccgtgccttt gttggtctcg cttttcacct ctatacggcc
     1561 gccatgcttc tggatgattc cgtagctaat gctcagtcca agccccatgc ctttcccgat
     1621 gggcttg
//
LOCUS       DASQSL010001871         1125 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_163146, whole genome shotgun sequence.
ACCESSION   DASQSL010001871 DASQSL010000000
VERSION     DASQSL010001871.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1125
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163146"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            239..421
                     /locus_tag="VE844_18850"
     CDS             239..421
                     /locus_tag="VE844_18850"
                     /inference="COORDINATES: protein motif:HMM:NF021604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HZC03331.1"
                     /translation="MLVVENMPPVPEDKIYQVWVIEDDVPKPSGLFEPGQEDPVAAVV
                     EHPVESDDAVAVTVEP"
     gene            655..864
                     /locus_tag="VE844_18855"
     CDS             655..864
                     /locus_tag="VE844_18855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03332.1"
                     /translation="MVKISVEVSNGAARFRVSVQARSIERALELVERLNPGKGCKVRF
                     PLDTEAFFIDEGVIAEVGTLGKVAA"
     gene            943..>1125
                     /locus_tag="VE844_18860"
     CDS             943..>1125
                     /locus_tag="VE844_18860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010253744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HZC03333.1"
                     /translation="MFAGLASPSHLIIVLVIILLLFGTKWILVLAKGLGTGIKEFREG
                     GSAGDDAKPGLPGTEKM"
BASE COUNT          253 a          312 c          350 g          210 t
ORIGIN      
        1 ccgaggccgc caagcgcgac tgcgcggttt ccaaagcgtt ggcgggcgtg gagatccgtc
       61 tagaagccaa cctgattgag cacgcgggat gataacccct ttggccctac aaggccgcgt
      121 ccaaagcctt caaagccagc cacaggaacc ccagtcaccc agatggcggg ctcgggggca
      181 ctgccaccga acagggaggc cgggcggagt tggtcaccct cattgaggag atcggctaat
      241 actagtagtc gagaacatgc ctcctgtacc cgaggataag atctaccagg tctgggttat
      301 agaggatgat gttcccaaac ccagcggcct cttcgagccc gggcaagaag acccggtcgc
      361 ggccgtcgtt gagcatcctg tggaaagcga tgacgctgta gcggtgaccg tcgagccctg
      421 agggggttta cccaagccga ccagcgatcc catgctggtg gccaaagttt gaactactcc
      481 aaagtaagta ccacccggcg cgtgatcgac caagacacat gctcgtgcat agcgaacccg
      541 aagggagaaa ctagtataag agtgctccct cttctccgca agacggtgat ctgaggtgcc
      601 cctcccttcc gtaaccccaa aaagcacatt ccgtaactca agggggttat aaagatggtg
      661 aagatctcgg tagaggttag caacggcgcc gcccgtttca gggtgtcggt gcaggcccgg
      721 agcatcgagc gggctttaga gctcgtcgag cgactgaacc ccggtaaggg gtgcaaggtg
      781 aggttccccc tcgataccga ggcgttcttc atcgacgaag gtgtcatcgc cgaggttggg
      841 acgctcggga aggtggcggc atgagccgct cggtccggcc ggtagcgttc ctaacgttcc
      901 taagcaacgt agccaagaaa acgcagaaag gataaaacgt cattgttcgc ggggctcgcg
      961 tcgccttctc atctgatcat tgtgctcgta attatcttgc tgctcttcgg gactaagtgg
     1021 atcctagtgc tagcgaaggg tttgggaacc ggtatcaagg agttccgcga agggggctcg
     1081 gctggcgacg acgccaagcc ggggttgccc ggaaccgaga agatg
//
LOCUS       DASQSL010001872         1593 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_163159, whole genome shotgun sequence.
ACCESSION   DASQSL010001872 DASQSL010000000
VERSION     DASQSL010001872.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163159"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            245..739
                     /locus_tag="VE844_18865"
     CDS             245..739
                     /locus_tag="VE844_18865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012594946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1269 domain-containing protein"
                     /protein_id="HZC03334.1"
                     /translation="MADLVAITYPDEHRAAEVLATLKRLQHEYLIDLEDSCVVTKDAQ
                     GKIKLHQSVNLTATGALSGAFWGSLVGLLFFFPLGGAAIGAAAGALTGALSDYGIDDQ
                     FIRSLSEQMTPGSSAIFMLVRKVTTDKVEPELAKFGGKILYTSVSKEAEAKFQAMLDS
                     VNQP"
     gene            971..>1593
                     /locus_tag="VE844_18870"
     CDS             971..>1593
                     /locus_tag="VE844_18870"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HZC03335.1"
                     /translation="MTRFLNTLFAMMILAGPALAQDLQGTLKKVRDTKTFTIGFREAS
                     FPFSFIDDQKKPAGYSVDLCTHVANSLRQYPGLSELQVKMVPVTPENRLDMVANGSVD
                     IECGSTTSTLTRQEQVDFSYMTFVDGGSILISTASNIERFADLAGKRVAVIPGTTTEK
                     NMAEELQKADITVQVVKVKEHSDGIAAIENGGADAYASDRIILIGLA"
BASE COUNT          348 a          455 c          488 g          302 t
ORIGIN      
        1 ggccgtggag aaagccgagg aatgctgagc cgttgctgac gtgtgacagc ttgacacaga
       61 gtgtggcaga tagcctcacg cctgaggcag gtgcatcgtg gtcactgcct atcgccagaa
      121 aatgcgctcg ggaaccaaga gattctggat tataatgcgt cgtatgccgg ttcgtcctag
      181 aggtaaggcc acaggcgagc gccgatgtat tgtaccgatg acgaattcac caaaggaggc
      241 taccatggct gatctcgtcg caatcaccta tcctgatgaa caccgggctg cggaggttct
      301 ggcgacactg aagcggctcc agcatgaata cctgatcgac ctggaagact catgcgtcgt
      361 cactaaggat gcccaaggca agatcaagct gcatcagtca gtcaatttga cggccaccgg
      421 agcgctcagt ggtgccttct ggggctctct ggtcggcctc ctcttcttct tccccctcgg
      481 gggtgcggcc atcggcgcgg cagcaggggc actcaccggc gccctcagcg actatgggat
      541 cgatgatcaa ttcatccgct cgctgagcga gcagatgacc ccagggagtt cggcgatttt
      601 catgttggtc cgcaaggtga cgaccgacaa ggtcgagccc gagttggcca agttcggcgg
      661 caagatcctc tatacctcgg tgtcgaaaga ggcagaggca aagttccagg cgatgctcga
      721 ttcggtcaac cagccgtagg cgtgaatccc aatgaccggt gaaggaagga aatgggtttg
      781 gagatccgcc ggagggaggg gcttcgggcg gcgccagacc tggctgggat ccgcctcacc
      841 ggggcgaggc aggggctgga gatcacgccc gcggtcaaag gcgtcaagac cgtcctcacg
      901 acgcgtccat tgctcccaca acgccgcatc cgctttggct ggcaccggtt accagccgct
      961 ggaggcacac atgacacggt ttctgaacac gctgttcgcg atgatgatcc tggccggccc
     1021 cgccctcgcg caagacctgc aggggacgtt gaaaaaggtt agagacacca agacgtttac
     1081 gataggcttc cgggaagcat cgtttccgtt ctccttcatc gatgaccaga agaagcccgc
     1141 ggggtattcc gttgacctct gtacgcatgt cgccaacagt ctcaggcaat accctggcct
     1201 gagcgagctt caggtcaaga tggtgccggt aacgccggag aaccgcctgg acatggtcgc
     1261 gaacggcagc gtcgacatcg aatgtgggtc gacaaccagt acgctcacgc gacaggagca
     1321 ggttgatttc agctacatga cctttgtcga tggcggcagc attttgatca gcacggcttc
     1381 caacatcgag cgtttcgccg atctggccgg taagcgggta gcggtcatcc ccggcaccac
     1441 cacagagaaa aacatggccg aagagcttca aaaggccgac attactgtgc aggtggtgaa
     1501 ggtcaaagag cactccgatg gcatcgccgc catcgagaac ggcggcgccg atgcctatgc
     1561 ttcggaccgc atcattctga tcggcctggc gat
//
LOCUS       DASQSL010001873         1029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_118573, whole genome shotgun sequence.
ACCESSION   DASQSL010001873 DASQSL010000000
VERSION     DASQSL010001873.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118573"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..477)
                     /gene="minD"
                     /locus_tag="VE844_18875"
     CDS             complement(<1..477)
                     /gene="minD"
                     /locus_tag="VE844_18875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008405202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HZC03336.1"
                     /translation="MDGRTIVITSGKGGVGKTTVTANLGTVLAQNGCKVCVIDADIGL
                     RNLDVVLGLENRIVYNLVDVIAGRCRVKQALIRDKRNENLFLLPASQSDDKNAIAPEQ
                     MRQLMQEMKKEHDYILIDCPAGIEQGFRNATAGADQAIIVTTPEVSAIRDADRVIGL"
     gene            complement(555..>1029)
                     /gene="minC"
                     /locus_tag="VE844_18880"
     CDS             complement(555..>1029)
                     /gene="minC"
                     /locus_tag="VE844_18880"
                     /inference="COORDINATES: protein motif:HMM:TIGR01222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004857 - enzyme inhibitor activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HZC03337.1"
                     /translation="SLPNGEPSAVTVPLASPLPSPVAPSRPSQRRERPPRAGEIARNN
                     ALLVKGPLRSGQRVYAEDNLVVFGDVNPGAEVIAGGDIMVMGTLRGVAHAGVPDNVEA
                     TIAALSLKPTQLRIGHFISRSPEFQEKHDSGPEIARVDAEQIVVDSFPRRLLGAS"
BASE COUNT          205 a          318 c          287 g          219 t
ORIGIN      
        1 caagccaata acccgatcgg catcgcggat ggcagacact tctggtgtgg tgacgataat
       61 cgcctgatcg gcaccagcgg tggcattccg aaacccttgt tcgataccgg cgggacaatc
      121 gatgaggatg taatcgtgct cctttttcat ctcctgcatg agctgccgca tttgctccgg
      181 ggcgatggca ttcttatcat cgctttgtga ggctggcagt aaaaacaggt tctcattgcg
      241 tttatcgcgg atgagcgcct gcttcacccg gcaacgaccg gcgatgacat cgacgagatt
      301 gtacacaatg cggttttcca ggcctaacac cacgtccaag ttgcgtaacc cgatgtcggc
      361 atctatcaca cagaccttgc acccattctg agccaggaca gtgccgaggt tcgccgtgac
      421 tgtcgtctta cccacgcccc ccttgcccga ggttataaca atggtccgac cgtccatgcg
      481 cctattctcc tgttcccacg ccgtcgcacc tcgaccagcc ggcgcactca cgactggtct
      541 tccaggctac ccacctatga ggcgccaagg agtcgcctag gaaagctatc tacgacgatt
      601 tgttccgcgt caactcttgc gatttctggg ccggaatcgt gcttctcttg aaattcaggc
      661 gagcgactga tgaagtgacc gatccgtagt tgggtcggct ttaagctgag ggctgcgata
      721 gtcgcctcga cattatcagg caccccggca tgcgccaccc cgcgcagcgt ccccatgacc
      781 atgatgtcac cgccggcaat gacctcagct cccgggttga catccccgaa cacgacgagg
      841 ttgtcctcag cgtagacccg ctgacccgag cgcagcggac ccttcacgag cagagcatta
      901 ttgcgggcta tttctccggc ccgcggcggc cgttcacggc gctgactggg gcggctaggt
      961 gccacagggg aagggagtgg tgaggccaaa ggaacggtta cggcagatgg ctcaccgtta
     1021 ggcaggctg
//
LOCUS       DASQSL010001874         1280 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_118575, whole genome shotgun sequence.
ACCESSION   DASQSL010001874 DASQSL010000000
VERSION     DASQSL010001874.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1280
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118575"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            76..485
                     /gene="rnpB"
                     /locus_tag="VE844_18885"
     ncRNA           76..485
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="VE844_18885"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            601..>1280
                     /locus_tag="VE844_18890"
     CDS             601..>1280
                     /locus_tag="VE844_18890"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HZC03338.1"
                     /translation="MLPEFERRYPDIRVRVQQIPWRAAHEKLLTAYAGDAMPDLFQLG
                     NTWIPEFVAIHAIEPLDARVTSSSVVVAEDYFSGIWETNRVEGHLYGVPWYIDTRLIF
                     YRKDILEQAGYTELPRTWTRWLEAMNRIKRQLGKEHYAILLPFTEWQPPVILALQQGA
                     ELLSDEAQYGNFQSRPFREAYNFYLDLFRQNLAPAVGEVQIVNLYQDFANGHFAMLIT
                     GPWNLGEF"
BASE COUNT          287 a          341 c          376 g          276 t
ORIGIN      
        1 aggtggtacc gcttttaaaa atagcctctt agggatttga aacttttctc ttgaggcttg
       61 acactaaata agtgaggagt cgaccgggca gctgctgcct ctactcttaa ggcagaggaa
      121 agtccgggct ccacagggca gggcgccagg taacacctgg gggacgtgag ctcacggaaa
      181 gtgccacaga aaacataccg ccgaacctcc gcacctgcgg gggtggtaag ggtgaaaagg
      241 tgcggtaaga gcgcaccgcg ccggtcaacg ccggtggcag ggtaaacccc gcctggagca
      301 agaccaaata ggggaacgcg ctgcttcttt tgaagcggca catgtggccc gcatgcgttc
      361 ccgggtaggt cgctagaggt gggcggtgac gtccatccaa gatgaatagc tgccccattc
      421 acactgggga aactcatatc acggtgttga atggacagaa cccggcttac aggtcgactc
      481 cttgctctct ggtatgcctt gttcattctc ctgatcgcct caggatgtga tacaggctca
      541 aatcctgcca cagtcgtcga attctgggca atgggccggg aaggcgaggc tgttggagcc
      601 ttgctcccgg aatttgagcg gcgttacccg gacattcggg tacgggtaca gcagatcccg
      661 tggagggcgg cccatgagaa gttactgact gcctatgcgg gcgacgctat gccggatctg
      721 tttcaattag gcaatacctg gatcccggaa ttcgtggcga tccacgcgat tgagcccctg
      781 gatgcacggg tgacaagctc ttcggtggtg gtggcggagg attatttctc gggtatctgg
      841 gagactaatc gggtcgaggg tcatctctat ggagtgcctt ggtatataga tacacggctt
      901 atcttctacc gcaaggacat cctggaacaa gccggctaca ccgaactacc ccgcacctgg
      961 acacgctggc ttgaggccat gaaccggatc aagcgacagc tcggtaaaga acattacgcc
     1021 atcctcctgc ccttcactga atggcagccg ccagtgatcc tggcattaca acaaggcgcc
     1081 gagctattga gcgatgaggc tcagtatggc aatttccaga gccggccctt ccgcgaagcc
     1141 tataacttct atctggatct atttcggcag aacctggcgc cggccgtagg ggaagtccag
     1201 atcgtcaatc tctatcagga cttcgccaat ggtcatttcg cgatgctcat taccggtcca
     1261 tggaacctcg gtgaatttga
//
LOCUS       DASQSL010001875         1000 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_172878, whole genome shotgun sequence.
ACCESSION   DASQSL010001875 DASQSL010000000
VERSION     DASQSL010001875.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172878"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..695
                     /locus_tag="VE844_18895"
     CDS             <1..695
                     /locus_tag="VE844_18895"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC03339.1"
                     /translation="LKPWQRQEWCIPPEANAELVCAMEDVLEVYKRPYDPTHPLVCMD
                     ESSKQLVKEAREPLPSEPGQPTRYDTEYERNGVSTLFLFFDPLAGWRPLEVREQRTAL
                     NWAHQVQQLLDVHSPKAERITRVMDNLNTHSPASLYKAFTPEEARRLLERLEVHYTPK
                     HGSWLNMAEIEFSILSKQCLDRRIPDQATLKAEVQAWVAERTACSSTMEWRFTTEDAR
                     IKLKRLYPTLEK"
BASE COUNT          246 a          274 c          287 g          193 t
ORIGIN      
        1 aactgaaacc ctggcagcgc caggagtggt gtatcccgcc cgaggctaac gccgagttgg
       61 tctgcgccat ggaagacgtg ctcgaggtct acaaacgccc ttatgacccg acgcatcccc
      121 tggtatgcat ggatgagagt agcaaacagt tggtcaaaga agcccgcgaa ccgctgccca
      181 gcgaacccgg tcagcccacg cgttacgata ccgagtatga acgtaatggc gtcagcacgt
      241 tgtttctgtt ttttgacccg ctggcgggtt ggcgccctct cgaggttagg gagcagcgca
      301 cggcactcaa ttgggctcat caagtccagc aactgctcga tgtgcactct cccaaggccg
      361 aacggatcac gcgggtgatg gacaatctta atacccatag cccggcgtca ttgtacaagg
      421 cgtttacccc ggaagaggcg cgccggctgc tggagcggtt agaggttcac tatacgccca
      481 agcacggcag ttggctcaac atggcagaga tcgaattcag cattctcagc aagcagtgtt
      541 tagaccggcg tatcccggat caagccacgc tcaaagccga agtccaagcc tgggtagccg
      601 aacgcaccgc gtgctcgtcg accatggagt ggcggtttac cacggaagat gcacgcatca
      661 aactgaagcg actctatccg acgttagaaa aatgatcgtg tactagcgcc agcgcaaatt
      721 tctcaaggcg cttacgcaga acctgcgaga ctcgctcagc gtcctcccgg tactggaaac
      781 aaatcacaaa gtcatcgata taccggatga gataagcctc actgcaaagt cgcggttggg
      841 cgtatctaag agttggggga ggagctcagg agcatgacaa gaggtgatat tcttcttgga
      901 gacgaggcca agaagaggac actcccttgt cacgcttaag cgatatgtta ggtgactatg
      961 acccgcagtt tcaaggaccg ctagcgcggg tgcgggaagc
//
LOCUS       DASQSL010001876         1433 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_118595, whole genome shotgun sequence.
ACCESSION   DASQSL010001876 DASQSL010000000
VERSION     DASQSL010001876.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1433
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118595"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(184..768)
                     /gene="hpt"
                     /locus_tag="VE844_18900"
     CDS             complement(184..768)
                     /gene="hpt"
                     /locus_tag="VE844_18900"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017874015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006166 - purine ribonucleoside salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HZC03340.1"
                     /translation="MWREAIQRVLISEAELRHRIQALGRAITADYAGKELVFVPVLRG
                     AIMFSADLARAVDLPLTIDCITLSSYGDRHVSSGRVRVLKDLADSVADKHVLIIEDIV
                     DTGITLQHLWQHLMAHRPADLHVCALLDKRARRQVELPIRYVGFEVPDAFVVGYGLDY
                     RQRYRNLPFIAILRPEVFAEDPRQSSGSPAREHG"
BASE COUNT          339 a          409 c          412 g          273 t
ORIGIN      
        1 gctattaacg ccggcgcccc acgctaggct ttggtcatgc ccatcggaag aaaagcaggg
       61 gatgacggct ggtacgcgtt tccctatagc atgatgccga accgcatgtc aaggcggttt
      121 ccccctggga atatggactc ttgaaggtct acaggcatga accggtcccg ccacatcggt
      181 cagttaaccg tgctcacgcg cgggagagcc cgacgactgg cggggatctt ccgcgaagac
      241 ttcaggccgg aggatggcga tgaaggggag gttgcggtaa cgctgccggt aatccagccc
      301 gtatcccacc acgaacgcgt cgggcacctc aaagcctacg tagcggatcg gcagctcgac
      361 ctgacgccga gcgcgcttgt cgagcagggc acagacgtgc aaatccgccg gacgatgggc
      421 catgaggtgc tgccagaggt gctgcagagt gatacccgtg tcgacgatgt cttcgataat
      481 caacacatgt ttgtcggcga cgctgtccgc aagatccttc aggacgcgga cccgccccga
      541 tgagacgtga cggtcaccgt agctggagag ggtgatacag tcgatggtga ggggtaaatc
      601 gaccgcccga gccaggtcgg cgctgaacat gatcgccccc ctgagcacag gcacgaagac
      661 caactccttg ccggcataat ccgccgtaat ggctctacca agggcctgga tgcgatgccg
      721 caactcggct tccgagatga gtacccgctg gatcgcctct cgccacatgt gtgtcctacc
      781 gtccttggcc ccgagatgcg cgcttctggc agtgctcctc aacccttcgc acgcggacat
      841 acctgccctg cctgcgtatg gggacaccac acgacacgga tgctcattat tcgcacggct
      901 tctccgccgc gtcaagtccc tatggcggac cgcgcatcca agacatggcc gcgtcagagc
      961 atggccacgt gcaggcatgg acggacgccc caggcgactg gcccgtcact ttgccgccag
     1021 gcgaaatccc tcaaagctgc taagaacatc acgattcctt caagataagc gcataaactt
     1081 aacattcttt ttcatcttat caagtaatat tacatttatt gtacatcata taagtgagat
     1141 gaaattgcag aagttggcat cgtaagctgc agtaacacgg catcgtagaa gagataaacg
     1201 ttagaggcct gcaccagagc accgaatgtc cttgacatag gcagggcgaa actttagagt
     1261 ggatgatgga tagatctcct gaacatctgt aaaattaagg ctttacagac tgcagtgccg
     1321 gggtggcacg aagcaagcct gcggggctca ttgcccgctg ggccaggaga tcgggcaagg
     1381 agggagtcga tggacgaaat cttcaagaaa atcgatgagc acactcagaa aca
//
LOCUS       DASQSL010001877         1204 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_93481, whole genome shotgun sequence.
ACCESSION   DASQSL010001877 DASQSL010000000
VERSION     DASQSL010001877.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1204
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93481"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(369..638)
                     /locus_tag="VE844_18905"
     CDS             complement(369..638)
                     /locus_tag="VE844_18905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020717687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2277 domain-containing protein"
                     /protein_id="HZC03341.1"
                     /translation="MCRNIKPLFNFEPPVNDEEVRAAALQYVRKISGFNKPSKANEVA
                     FYAAVDEIAATSNRLLASLETNAPPRNREVEAAKARARAVQRFAS"
     gene            858..>1204
                     /locus_tag="VE844_18910"
     CDS             858..>1204
                     /locus_tag="VE844_18910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009281648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03342.1"
                     /translation="MSGIVSKKLGIKEGTRAIFLNASEVERGAIDPPSLDVASELAGE
                     FDYIHLFARTQAELDDTFPKLKAHLKPTGMLWVSWPKNKKLGTDLALPKVIEIGYNHG
                     FVESKTLSVDATWS"
BASE COUNT          256 a          331 c          375 g          242 t
ORIGIN      
        1 aagctcaggg ctgagacaga tttagaggcc ttaagcgatg acttggtggg ggtggtaagg
       61 gagactatgc agcccgctca cgtctcgctg tggttgcgct ccgagccgcc accgagagga
      121 agtgaagggc gagagcaacc ccaaagctga agtagccacc taccccgacg cctcgcccgt
      181 cggctcgtca ccttcgaggg cgtcgtccat cgcgcttgca gtgtgtttgc ccatcgaggg
      241 catccagtgc gagtatctat caagagtgag ctgcactgaa gcgtgaccga ggagcttctg
      301 gacgtaagtc gggtgcgtgc cgcgcgagag cagcagcgtt gcgcactagg aagggccgaa
      361 ccaccggatc aactggcaaa tctctgcacg gcgcgagccc gcgcctttgc cgcctctact
      421 tcgcggttcc tcggcggcgc attggtttcc agtgaggcaa gcagtctgtt tgaggttgcc
      481 gctatctcgt cgacggcggc ataaaaggcg acttcgttgg ctttggatgg cttgttgaag
      541 ccgctgatct tgcgcacata ttgtaacgct gccgcgcgga cttcttcgtc gttcaccggt
      601 ggctcgaaat tgaacagggg cttgatgttt cgacacatat gctcctcctg cggttgggcg
      661 ttgtctgagc gcagaatacg gcatgaatcc agaaatccaa tagtgagtgt gaaagggtat
      721 tgtaggacct caaccttcaa aaaaaggtgg ttgaataggg cgggcaagat cacgccggtg
      781 aacgtcctct cgatggtgcg gccgacgagc gatcggtaca atcaccggca tcgcaagccg
      841 agccgatggg agccgtcatg tcaggaatcg tctccaagaa gttgggcatc aaggaaggaa
      901 cccgcgcgat cttcttgaac gcctctgagg tcgaacgggg agcaatcgat ccgccgagcc
      961 tcgatgtcgc ttcggagctt gccggagagt tcgactacat ccacctcttc gcgagaaccc
     1021 aggcggagct cgacgatacg ttcccgaagc tcaaggctca tctcaagccc acgggcatgc
     1081 tctgggtctc gtggcctaag aacaagaagt tgggaaccga tctcgcgctg ccgaaggtca
     1141 tagagatcgg ctacaaccac gggtttgtcg agagcaagac cctgagcgtg gacgccacgt
     1201 ggtc
//
LOCUS       DASQSL010001878         1485 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_200567, whole genome shotgun sequence.
ACCESSION   DASQSL010001878 DASQSL010000000
VERSION     DASQSL010001878.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1485
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200567"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            77..400
                     /locus_tag="VE844_18915"
     CDS             77..400
                     /locus_tag="VE844_18915"
                     /inference="COORDINATES: protein motif:HMM:NF025677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase zinc-binding domain-containing
                     protein"
                     /protein_id="HZC03343.1"
                     /translation="MIKPFYLNNLIPLTRCNPMMAHVSRDWSVFKQIFADHWSRFQQA
                     PPRYQTSYYDGLVANMLECGNPDKMGYLDYRCHQCGQGKHLVSMSCKSSLCLRCSKVY
                     VDTTG"
     gene            358..1362
                     /locus_tag="VE844_18920"
     CDS             358..1362
                     /locus_tag="VE844_18920"
                     /inference="COORDINATES: protein motif:HMM:NF016847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03344.1"
                     /translation="MPAVFEGLRGHNWVSQVSRVLHEGVIYRHIILTVPAMFRTIFYQ
                     NAAELVNALMRCGVRCLDDFYSEVRGKRLKGGYLTVIHTHGRNGQYHPHLHVIATSGG
                     YDEVEERWEHLRFLPYELLRHKWQWHLMDTFRKTLATDEMKRLVDQCYRQYPGGLVAN
                     VQKGKVPSQYQSLASYVAKYVVSPPISVRRIDRYDGHRVTYHYRSHWTQRTTYETVDV
                     MTFIGRMVQHTMPKGFKRIRYYGVQATKTFAKVKVAIRAALAKVQGVVKGAVKIIARL
                     NYRQRYENSTGRDPLVCPHCGEEMGLWRIWHPRYGVIYDEAQVIKRGTYASSGQRSGP
                     "
BASE COUNT          346 a          372 c          455 g          312 t
ORIGIN      
        1 catacctcaa agataaacgc gacgagtgag ggtccccata ggacgacgga tgaggggtgg
       61 acgaagcggg tgaatcgtga taaaaccatt ttacctaaac aacctgatcc ccctcactcg
      121 gtgcaacccg atgatggcac acgtctcgcg ggactggagt gtcttcaagc agatttttgc
      181 cgatcactgg agccggtttc aacaggcccc tccgcgttac cagacgtcgt actatgatgg
      241 cctggtggcc aacatgctcg agtgtggcaa cccggacaag atgggttacc tcgactatcg
      301 ctgtcatcag tgtggccagg gcaaacacct ggtgtcgatg agctgtaaat cgtctctgtg
      361 cctgcggtgt tcgaaggtct acgtggacac aactgggtga gccaggtgag ccgggtgctg
      421 catgagggcg tgatttatcg gcacatcatc ctgaccgtac cggcgatgtt tcgcaccatc
      481 ttctaccaga acgccgccga gttagtgaat gccttgatgc gatgcggggt tcggtgtctg
      541 gacgatttct atagcgaggt gcggggcaaa cggctcaagg gtggctatct cacagtgatc
      601 cacacccacg gtcgcaacgg tcaataccat ccgcacctgc atgtgatcgc tacgagtggt
      661 ggctatgatg aggtggaaga acgctgggaa catttgcgtt ttttgcccta tgagctgttg
      721 cgtcacaagt ggcagtggca tttgatggac acgtttcgaa agacactggc tacagatgag
      781 atgaagcgtc tggtggatca gtgttaccgg cagtatcccg gtggtctggt ggccaacgtg
      841 caaaagggta aggtgccgtc gcagtaccag agcttggcga gctatgtggc caaatacgtg
      901 gtgagcccac cgatctcggt caggcgtatc gatcgctatg atggtcaccg tgtcacctat
      961 cactatcggt cgcactggac gcaacgcacc acctatgaaa cggtcgatgt catgacgttt
     1021 atcggccgca tggtgcaaca cacgatgccc aaggggttca aacgcattcg atattacggg
     1081 gtacaggcga ccaagacgtt tgccaaagtg aaggtggcga ttcgagcggc gttggccaag
     1141 gtgcaaggcg tggtcaaggg ggcggtgaag atcatcgccc ggctgaacta tcggcagcgg
     1201 tacgagaaca gcacgggacg agacccattg gtctgcccac attgtgggga agagatgggg
     1261 ctttggcgca tctggcaccc gaggtatggg gtgatctatg acgaggcgca ggtgatcaaa
     1321 cggggcacct atgcatcaag cgggcaacgg tccggtccct gaggcaaaac ggtagtctta
     1381 aaggcgcacc caaagggcgc ctatgttcaa atttccgaaa ctccaaaaaa aatgcccgaa
     1441 cggtgagtta caggagccgc tgcgcaaagt cgttagtttt accga
//
LOCUS       DASQSL010001879         1994 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_107843, whole genome shotgun sequence.
ACCESSION   DASQSL010001879 DASQSL010000000
VERSION     DASQSL010001879.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1994)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1994)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1994
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107843"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(65..1423)
                     /locus_tag="VE844_18925"
     CDS             complement(65..1423)
                     /locus_tag="VE844_18925"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HZC03345.1"
                     /translation="MQFRILIVDDEEVIRASIALYLRQEGYQVDVCASGEEGLRRIEE
                     VGPDLVLLDVKLPTLGGLDVLKRAKALKNDLIVVMITAFGSIESAVQAMKAGAYDYIT
                     KPLDLDELEVIIKKGLETVRLKKEVSLLRKERLERFNVEYVAAESLSMREVEEQIEKI
                     ALYDSGTVLIQGESGTGKELVATSIHYKSPRSEKPFVVVNCAAIPRELVESELFGYES
                     GAFTGAARQGKMGKLEMAEGGTLFFDEIGELDLSAQVKLLRFLETREFERIGSTKPPR
                     KIEVRILAATNKRLIDFVNAGSFRLDLYHRLNVMSIVVPPLRERQADILKIAKHFVNH
                     NNRQFSKHVRGFTAEAEEALLSYGWPGNVRELKNIIERAVFLCEGEIITRGDLAIELP
                     SNPNLPQLIGLLAGEPILPLDEVVRRYIHEVVEKTGGNKSQAARLLGITRKTLRERLD
                     RG"
     gene            complement(1534..>1994)
                     /locus_tag="VE844_18930"
     CDS             complement(1534..>1994)
                     /locus_tag="VE844_18930"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZC03346.1"
                     /translation="PILALCSVNKVIEEALFFSAPQAQENRIVIEKNLGKNLPLVLLD
                     QEQIRRVFINIILNALQAMHPGGMLRIRTARGTVRRVMVRISDTGTGIPPATLKRIFD
                     PFFTTKSQGAGLGLSISRTILEKHRATITCDSQEGEGTTFTILFPTQPEV"
BASE COUNT          412 a          582 c          554 g          446 t
ORIGIN      
        1 gtcagcggcg ctcagttatc agtagagaca acagacgacg aaagccgaag gggccaggcc
       61 agtgctaacc ccggtcgagg cgctcccgca gcgtcttgcg cgtgatacct agcagacgag
      121 cggcctgact tttgttgcca ccggttttct cgacgacctc atggatataa cgccggacga
      181 cttcatccag gggcagaatg ggctcaccag ccaggaggcc gatcaactgt ggtaagtttg
      241 gattggatgg gagctcgatg gctaaatcgc cacgggtgat gatctccccc tcacagagga
      301 acacagcgcg ctcgatgata ttcttgagct cccgcacatt gcccggccag ccataggaaa
      361 gcaatgcctc ctcggcttcg gcagtaaagc cgcgcacgtg cttgctgaat tggcggttgt
      421 tatggttgac gaagtgcttg gcgattttca ggatatccgc ttggcgttca cggagcggtg
      481 gcacgacgat ggacatgaca ttgaggcggt ggtacaggtc gaggcggaat gatccggcat
      541 tcacaaagtc gatcaggcgt ttgttcgtgg ctgccaggat acgcacctcg atcttccgcg
      601 gcggtttcgt gctaccaatg cgctcgaatt cgcgtgtctc caagaaacga aggagcttga
      661 cctgagccga gaggtcgagt tcgccgatct catcgaagaa gagcgttccc ccctccgcca
      721 tctcaagttt tcccattttg ccctgccgcg ctgcaccggt gaaggcccca ctttcatagc
      781 cgaagagctc gctctccacc aattcccggg gaatcgcggc gcaattgacc acgacaaagg
      841 gtttttcaga acgcggactc ttgtagtgaa tgctggtcgc cacaagctct ttgccggtgc
      901 cactttcccc ctgaatcagc accgtaccgc tatcgtagag ggcgattttc tcaatttgtt
      961 cctcgacctc gcgcatgctg aggctttcag ccgctacgta ttccacgttg aagcgctcca
     1021 ggcgctcctt acggagtaag ctgacctcct tcttcaagcg cacagtctcc agccccttct
     1081 taatgatcac ctcgagttca tcgaggtcta ggggcttggt gatgtaatca taggcgcctg
     1141 ctttcatggc ctggacggcg ctttcgatgc tgccaaaggc tgtgatcatc actacaatca
     1201 ggtcattttt gagcgctttg gcgcgcttga ggacgtcgag gccgccgagt gtgggcagct
     1261 tgacgtccaa gagcacgaga tccggcccaa cctcttcaat ccgccgcagt ccctcctcac
     1321 cgctcgcaca gacgtcgact tggtatccct cttggcgaag atacaaggca atcgaggcgc
     1381 ggatgacttc ttcgtcgtcg acaatcagga ttctgaactg cataacgttc gcactcacta
     1441 ccatcgagta acagcgtgaa cggttcgacc ctgacgaccc gctcctctcc agccatacgt
     1501 gaggtgtaca cgacgtctcg tcacctcgga cggctagacc tcaggctggg tagggaagag
     1561 gatggtaaag gtcgtacctt ccccctcctg actatcgcag gtgatcgtgg cgcgatgctt
     1621 ctccaagatc gtccgcgaga ttgacaaccc cagacctgcc ccctgcgact tagtggtaaa
     1681 gaaggggtcg aaaatccgct tcaaggtggc cggtgggata cccgtcccgg tgtcggagat
     1741 gcgcaccatg acacgcctca ctgttcccct cgccgtgcgg atccgcagca taccaccagg
     1801 gtgcatggcc tgcagcgcgt ttaagataat gttgataaag actcgtctga tctgctcttg
     1861 gtccaaaagc accagtggga gattcttgcc cagatttttc tcgataacga tccggttctc
     1921 ttgcgcctgt ggggcactaa agaagagggc ctcctcgatc actttgttga cggagcagag
     1981 ggcgaggatc ggtt
//
LOCUS       DASQSL010001880         1614 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_172936, whole genome shotgun sequence.
ACCESSION   DASQSL010001880 DASQSL010000000
VERSION     DASQSL010001880.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172936"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..223
                     /locus_tag="VE844_18935"
     CDS             <1..223
                     /locus_tag="VE844_18935"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HZC03347.1"
                     /translation="AGICQGLAVASLFQALSRAPVTVVSPINASNPLITLVLAHLFLR
                     RLESINSALVVGTLLSVGGVALVVLGASI"
     gene            complement(351..>1614)
                     /locus_tag="VE844_18940"
     CDS             complement(351..>1614)
                     /locus_tag="VE844_18940"
                     /inference="COORDINATES: protein motif:HMM:NF013741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HZC03348.1"
                     /translation="VLAEFSLVAMRRSRVDQLLAQGHPLAPAVCHATEHLDSYLAACQ
                     LGITIASIGLGWVGEPALAHLLEIPLKPILGDWTSVGAHTIAVAVAFAVITALHIIFG
                     ELMPKSVALQRTERSALLVSIPLRIFLIIFKPFIILFNGTGNWLLSHFGLHPAASEQV
                     VLNVDELYLLLEQSRKAGILDSHEAEVAERALEFSELQAREVMVPRNQIVGIPAEASL
                     EEVLEQSASTGFTRFPVYQQTLDNILGIVDIRHVAHSLLAEPQPADTVIQVIRPVLAI
                     PEYLQLNQALMAMHRERIQMAILVDEHGGTAGLVTVDDIVRVLLREMVEEFRDEAAEV
                     QELPDGSFLIQGMVPLEELEWRLGLEVPRDDAVTIGGWVTERLGRIPQVGDQYSFQNY
                     TFQVAAMDGLRVAQVCLLKGPVAALDVR"
BASE COUNT          345 a          484 c          451 g          334 t
ORIGIN      
        1 ggccggcatc tgccagggcc tggcagtagc ctctttgttc caggccctga gccgagctcc
       61 agtaacagta gtcagcccca tcaacgctag caatcccctg attaccctgg tcctggccca
      121 cttgttttta cggcggctgg agtctatcaa ctcggccctg gtggtgggaa ccctgctcag
      181 cgtgggggga gtggcgctgg tcgtcctggg ggcatcgatc tagaagactc tcgttacgca
      241 gcctcgcctt aggtaaggcc tcttaatcac caagaattat ggaggagcca tggtacttga
      301 attcttgctc atctcctgcc tcatctagct catgccgtag agttgccctc ctatctaacg
      361 tctaacgcag ccactgggcc cttcaacagg cagacctgag cgacgcgcaa cccgtccata
      421 gctgccacct ggaaagtata gttctggaag gagtactggt caccaacctg aggtatacgc
      481 cccaagcgct cggtgaccca gccaccaatg gtcactgcat cgtcccgggg cacctctaac
      541 cccagcctcc actccagttc ctccagggga accattcctt ggataaggaa ggagccatca
      601 ggcagctcct ggacttctgc cgcctcatcg cgaaactctt ctaccatctc cctgaggagc
      661 accctgacta tatcatccac agttactagg cccgcagtac cgccatgctc atccactaga
      721 atagccattt ggatccgctc ccggtgcatg gccatcagtg cctgattgag ttgtaggtac
      781 tcagggatgg ccaggaccgg ccgtatgacc tggataactg tatcggctgg ctgaggctcg
      841 gccagcaagc tgtgcgcaac atgtctgatg tcaactatcc ccaggatatt gtccagggtc
      901 tgctggtaga caggaaaacg ggtgaagccg gtgctggcgc tctgttccag tacctcctca
      961 agagaggcct cggcaggaat ccccactatc tggttgcggg gcaccatcac ctcacgggcc
     1021 tgcaactcgc tgaactctag ggcacgctcg gcaacttccg cctcgtggct gtctaagata
     1081 ccagccttgc ggctctgttc caggagtagg tacaactcat ctacgttaag gaccacttgt
     1141 tcactcgcag ccgggtgtag accaaagtgg ctcaggagcc agttgcccgt tccattgaag
     1201 aggatgataa atggcttgaa gatgataagg aagattcgca gggggatgga tactagcagg
     1261 gcactccgct cggtgcgctg caaggctacg cttttgggca tcaactcgcc gaagataatg
     1321 tgcagcgcgg tgattacggc gaaagccaca gcgactgcaa tagtatgagc tccgacactc
     1381 gtccagtcac ccaagatggg tttcagcgga atctctagca ggtgggccaa agccggctcg
     1441 ccaacccagc ctaggccgat agaggcgatg gtaatgccta gctggcaggc cgccaggtag
     1501 ctgtccaggt gttcggtggc atggcacacc gccggggcca gagggtgccc ctgggccagc
     1561 agctgatcga cgcggctacg gcgcatggct accagggaga actcagctag aaca
//
LOCUS       DASQSL010001881         1092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_163250, whole genome shotgun sequence.
ACCESSION   DASQSL010001881 DASQSL010000000
VERSION     DASQSL010001881.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1092
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163250"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..255)
                     /locus_tag="VE844_18945"
     CDS             complement(<1..255)
                     /locus_tag="VE844_18945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03349.1"
                     /translation="MRVRSSLGRGPDGRTLRRRAGARRATLGRHFSPWDVLPWAWQAP
                     YALSPGGHGLYVLITGGRGCALPEGAAWASPRVHAARAVAW"
     gene            complement(282..797)
                     /locus_tag="VE844_18950"
     CDS             complement(282..797)
                     /locus_tag="VE844_18950"
                     /inference="COORDINATES: protein motif:HMM:NF014668.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein RecX"
                     /protein_id="HZC03350.1"
                     /translation="MNDREAAIGRAKREAYRLLASRSRTAHELRDRLQQRGHKINDID
                     QVIYQLVHEGYLDDRKFAFDWARYRLQEKPLGRRRLSWEIQRRGINSELLEEVLNDIY
                     AEFDQVALAEQALRKRLRIAGIPRSVYERQKLSRYLVSLGFDGDIIATALTTVLGSVI
                     PIEGIAGEDLP"
     gene            complement(800..>1092)
                     /locus_tag="VE844_18955"
     CDS             complement(800..>1092)
                     /locus_tag="VE844_18955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003019942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03351.1"
                     /translation="FDIMYGEGISREGDLLDLSADKGLITKSGAWYSYHDERIGQGRE
                     NAKKYMKDNPALTAELDIQLRQELGLVRISSDASASTRELAGSRKDKSSDEL"
BASE COUNT          240 a          321 c          296 g          235 t
ORIGIN      
        1 ccaggccacg gcccgcgcgg cgtggacacg cggcgacgcc caggcggccc cctccgggag
       61 agcgcatccg cggccgccgg tgatcagcac gtacagcccg tgcccccctg gcgaaagggc
      121 gtagggagcc tgccacgccc atgggagaac gtcccagggg gaaaaatgtc ggccaagcgt
      181 ggccctgcga gcgcccgccc gccgtcgaag cgtccggcca tcgggccctc tacccaagga
      241 agagcgtact ctcacaccaa gagcatcttt gggggataga ttcacggtag atcttcccca
      301 gctatgccct caatcggtat cacagagccc aagactgtag tgagggcagt ggcaataatg
      361 tcgccatcaa atcctaaact cacaagatat ctgctgagct tctgacgctc atacacagag
      421 cgaggaatgc ctgcaatacg gagacgtttg cggagagcct gttcggctaa tgcgacttgg
      481 tcgaattcag cgtagatgtc atttaagact tcctcaagca attccgagtt gattccacgc
      541 cgttgtatct cccatgataa gcgccggcgt cccagaggct tctcttgaag acggtaacgc
      601 gcccagtcaa aggcaaattt gcgatcgtcg agatagcctt catgcaccag ctgataaata
      661 acctgatcta tgtcgttgat cttgtgtcca cgctgctgaa gcctgtcgcg cagttcatgt
      721 gctgtgcggc ttcgggaggc aagcaggcgg tatgcctccc gtttagcgcg gccaatagca
      781 gcttcgcggt cattcatggc tatagctcgt ctgaggactt gtcctttcgg ctgcctgcca
      841 attctctcgt ggaggcagat gcatcggagg aaatgcgcac aagcccgagc tcctgtcgta
      901 attggatatc aagttcagct gttaaagcag ggttatcctt catatatttc ttggcattct
      961 cgcggccttg gccaatgcgc tcgtcatgat aagagtacca ggcgccactc ttagtgatca
     1021 gccctttatc ggcagataaa tccaagaggt cgccttcgcg cgaaatcccc tctccataca
     1081 taatgtcaaa ct
//
LOCUS       DASQSL010001882         1680 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_150259, whole genome shotgun sequence.
ACCESSION   DASQSL010001882 DASQSL010000000
VERSION     DASQSL010001882.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1680)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1680)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1680
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150259"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(82..1594)
                     /locus_tag="VE844_18960"
                     /pseudo
     CDS             complement(82..1594)
                     /locus_tag="VE844_18960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006512727.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ISKra4 family transposase"
BASE COUNT          303 a          560 c          442 g          375 t
ORIGIN      
        1 acatcaaaac tcacccgggt cacttcgatc aattcttcaa acggaatggg tgcggctctt
       61 ttagaacgac gctcaagcat attatgcggt cttctggaga gggcggttct cgatacgaga
      121 ggagtaattg cgcctgagct cttgggcttt gtggaagtcc caataggcat taccatcgcc
      181 gctggaatgc agtgaacgaa gcttcaatac cgcctcggca ctgttcaagc gccagcgtgc
      241 acccgtgata tccatccggt ctttaaccag gtgacggcag gccccttcga tgacaccggt
      301 agcaatgggg agcccttggg ccagatagcc atcatagtgc accatgtctc ggtacttgag
      361 cagataatcc gcgcaggtat cgactggctt gcgctcaggg gcggagagtt ggcataaggt
      421 cgcggctctg cgcatgccgg cggccacatc gctcgccttg cctttgagga tctgcaacgc
      481 tcgatctcca accccctgct cggcctcttc gctgcctggg gtaaagaagc cccaggcggc
      541 cttccacagg tattcgagca cgtggatgaa gtcgaggata agcgtgacct cgacccggtg
      601 gtgtccgatg ccggcgtgga tatgctccag ttgcccctca tgtccatcga ccaacatcac
      661 ccagggccgt cgccgctcag ggtcgcgttg caacgcctcc gcgaagacct cttcggtcac
      721 cgcttgtggc gcgcgctgca cactggccca gacccgcttg ttgcgtgccc gtggcttggg
      781 gctcggatcc tgctccactt ttatgcccat aatcgactcg gcactgcgca catctcgctc
      841 aatgctgtag agggctgcta ccgtcgccat gcgcttgcgg ttgcgtttct cgccctggct
      901 caagcgcgtc ttgagcttgt gctgctcccg ctccgccgcc ttccgcgtcg cctcccgaag
      961 gtcctcccgg cgcatcacga tccccttgcc atcaaggctc atcaccaagg ggtccagcgt
     1021 cggctccggc tcatcgctcc cccggctggc atagaaggcc tcgaagtctt ggctgacctg
     1081 cgccaccagc gcctcggcct gacgcttggg caccttgccc cccgtcgtac gctcaagacc
     1141 cagcaccgct tcgtcaaacg aactgcgggc cacctcttcg gctaaccgcc cccgtatacc
     1201 atgcgagtag ctatcccgcg gcaggttgag ctctccatcc aggggaaaca cactctcttc
     1261 ccctcgggca ccgtagccca gccgccgcac tgtcacttcg ccaaacagcg tcatcaagcc
     1321 gcgttgacac gcttccctga catgacgggg ggagcacccc atcggagcct tttacctcct
     1381 cgcgtttcgt ctccttcacc gtacgcagat ccagatgccc ttgcagcaac cgtcgcagta
     1441 gctccgtgcc ctcaggcgta atcagctctt ctacttcgcc atgttccatc cgcaatacct
     1501 gattcgattg gagctgattg accagagagc caaactgctc gcaggctgcg gtgaactctt
     1561 ccagaccttg gataagggtg tatgctggct gcatgagagg ggctcctttt tgggacgtag
     1621 ggttgtcatt aactcataca taccaccgac taccctctct ttctatactt tttctcttta
//
LOCUS       DASQSL010001883         1701 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_107868, whole genome shotgun sequence.
ACCESSION   DASQSL010001883 DASQSL010000000
VERSION     DASQSL010001883.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1701)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1701)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107868"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(94..>1701)
                     /locus_tag="VE844_18965"
     CDS             complement(94..>1701)
                     /locus_tag="VE844_18965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03352.1"
                     /translation="KLSSAGRVRLSVGLVVALFFAWLVSPAFHGLVMALYVNWPFFLV
                     TLGGGLLAAYLWNIGDKDPAKLVALIAAVAAVAYVFTAAPLRDLKYLDSIEANEIEEM
                     PDTTGVRYLPYEVAARFGQNTQDDSTLVLGDFEPLDNEEGGIDWVAPREPNGVWNSFI
                     NNQDGAMVIKPDGSAELVSQEFKRGEGMALHRNVAWQLKRERFFVHHTNQYYVLHDGE
                     LLGLVPYVSYKFSFPVMVPQWGGVMVVHPDGEIEDLSPEEAITDGRFEGERLYPEQLA
                     RKVGDVWKYRNGYWNTWSAHEDEAVIPEIGATDEVNSSGGKAAKSSESSSATQGSTNQ
                     MPFLIPTEEGPQWFLAAEPYGGSFSMYRAIYINAHDGEVTYFRPDTGSALIGVNKGLD
                     YARATFPNYQWGRNAILLEPRPIIKDETLYWMATITNADTAGVNKTVMVNSAEQGEVT
                     VLESYEDVMAFVEGEDTGRTVEVEGDGPSGASGEPSETPENETPEEQPAQSSTPQSPT
                     DVSNMSEEELIRVIREAADELESRKEE"
BASE COUNT          338 a          518 c          444 g          401 t
ORIGIN      
        1 gcgccttcgg tcagcagggt gcggaacctt agctctggtc cctttgtatt ttgggaccag
       61 tatcttggtg caaggccggt ctgccaagaa gggctactct tcctttctgc tctccagctc
      121 gtcagccgcc tcccttatca ccctgataag ctcttcctcg ctcatattag agacatcggt
      181 cggcgattga ggagtggaag actgtgccgg ttgctcttcg ggtgtctcgt tctccggtgt
      241 ttcggacggt tccccggatg ctcccgaagg tccatctccc tcgacctcta ccgtcctacc
      301 ggtatcctcg ccctcaacga acgccatcac gtcctcgtag gattcgagaa ccgttacctc
      361 tccctgttcg gcactgttga ccataacggt tttgttaacc cccgctgtat cggcgttggt
      421 gatggtggcc atccagtaga gggtctcgtc ttttattatc ggtctgggtt cgagtaggat
      481 cgcattccga ccccactgat agttggggaa ggtggctctg gcatagtcca gacccttgtt
      541 gaccccgatc aaggcgctgc cggtgtcggg cctaaaatag gtaacctcgc catcgtgggc
      601 gttgatgtag atcgcccgat acatagagaa gctaccgccg taaggctcgg cggccaagaa
      661 ccattggggt ccctcttccg tggggataag aaagggcatc tggttggtcg aaccctgagt
      721 agccgagctg ctctcggaac tcttggctgc cttacccccg gaactgttga cctcatccgt
      781 tgcacctatc tcggggataa cggcctcatc ctcgtgggca gaccaagtgt tccagtagcc
      841 gttacgatac ttccagacgt ctcccacttt cctcgccaat tgctcgggat agagcctctc
      901 cccttcgaac cgcccatccg ttattgcctc ctcgggagat agatcctcta tctctccgtc
      961 ggggtgaact accataaccc ctccccactg agggaccatc accgggaagg aaaacttgta
     1021 gcttacatag gggaccagcc cgagcaactc accatcgtgg aggacgtagt actggttggt
     1081 gtggtgtacg aagaaccgct ctctcttgag ctgccaagcc acgtttctat gcagggccat
     1141 gccctcgccc cgcttgaatt cctggctcac aagctccgcc gacccgtcag gcttgatgac
     1201 catggctccg tcctgattat tgatgaatga gttccaaacc ccgttgggtt ctctgggggc
     1261 tacccaatct atcccgccct cctcattatc caggggttcg aagtctccga gcacaagggt
     1321 agagtcgtcc tgggtattct gcccgaaacg ggcggccacc tcatacggga ggtaccttac
     1381 ccccgtcgtg tcgggcatct cttcgatctc gttagcttct atcgaatcca ggtatttcag
     1441 gtcccgtaaa ggtgcagctg taaatacata tgctacggca gcgacggcag caatgagggc
     1501 tactagctta gctggatcct tgtcccctat attccagagg taagctgcaa ggaggccacc
     1561 gcccagtgtc acaaggaaga agggccagtt tacgtacaac gccatgacca aaccgtggaa
     1621 tgccggagag accagccacg caaagaacag ggctacgacg agccccaccg acaaccgtac
     1681 ccgaccggcc gacgataatt t
//
LOCUS       DASQSL010001884         2298 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_150299, whole genome shotgun sequence.
ACCESSION   DASQSL010001884 DASQSL010000000
VERSION     DASQSL010001884.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2298
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150299"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            42..1097
                     /gene="mtnA"
                     /locus_tag="VE844_18970"
     CDS             42..1097
                     /gene="mtnA"
                     /locus_tag="VE844_18970"
                     /EC_number="5.3.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013221048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046523 -
                     S-methyl-5-thioribose-1-phosphate isomerase activity
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5-thioribose-1-phosphate isomerase"
                     /protein_id="HZC03353.1"
                     /translation="MPTQTKLSCHDTLRAVEWTEGSVRLLDQRLLPQRCEYRLFNTAV
                     EIAHAIRHMVVRGAPAIGITAAYGVVLAAREAHARSGSNWREAIKPDLERLLGSRPTA
                     VNLHWAIARMQTVFPDAEGDPEPQLLAAAQAIQAEDIAANRCMAGIGAALIAPGSTVL
                     THCNTGSLATGGFGTALGVIHSAYARGAIKTVYVGETRPWLQGARLTAWELVREGIPV
                     TLLADSAAAYLMQRGQIDWVIVGADRIAANGDVANKIGTYSLAVAARAHGVKFMVVAP
                     TSTLDKAIPTGQSIPIEERASEELLHLGREPLAAAGAKAWNPVFDITPAKLIDVIVTE
                     KGAIHKPKTTFHEMSLE"
     gene            complement(1152..2135)
                     /locus_tag="VE844_18975"
     CDS             complement(1152..2135)
                     /locus_tag="VE844_18975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007039278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ribofuranosylaminobenzene 5'-phosphate
                     synthase family protein"
                     /protein_id="HZC03354.1"
                     /translation="MSITVTAPARLHMGFLDMNGELGRRFGGLGLTLSGICTRLAVSK
                     STPISASGPSNQRASIYAQTLFQALGLTGGVHIEVLEAIPEHVGLGSGTQLALAVSSA
                     IARLYELDMELRVLAGLMQRGIRSGVGLGAFEQGGFIVDGGQGDRTTVPPVICRTPFP
                     EGWRIMLIFDRAYQGLNGALEVAAFKRLEPIESTLAMHLCRVLLMQVLPALIEEDFNR
                     FSGGITVIQDIVGDYFSGSQGGRYSSPKVAEVLGWLKAEGVQGIGQSSWGPTGFALFE
                     NAERAEHVMIEARSRWGEPLNFMVCTGRNRGAEILIKSAELSSHSLNAYPA"
BASE COUNT          507 a          668 c          623 g          500 t
ORIGIN      
        1 gtactgctga tagattttta taatttagag cgatcaaatc gatgccgacc cagacgaagc
       61 tctcttgtca cgacaccctc cgcgctgtag agtggaccga agggagcgtc cgattattgg
      121 accagcggct gctgccgcag cgctgcgaat accggctgtt caatacggcg gtggagatcg
      181 cccacgccat acggcatatg gtcgtgcggg gtgcacctgc gattggtatc accgcggctt
      241 atggcgttgt cctggccgcg cgagaggccc atgcgcgctc aggaagtaat tggcgcgaag
      301 ccataaaacc ggatctcgaa cgcctgctcg gctcacgccc cacggcagtc aacctgcatt
      361 gggccatagc gcgtatgcaa acagtatttc cagacgctga aggcgatcca gagcctcagc
      421 tgctcgcagc agcgcaggcg atccaggccg aggatatcgc tgctaaccgg tgtatggcag
      481 gcattggcgc cgcgctcatc gcaccgggtt ccacggtcct gacccattgt aatacgggtt
      541 ctctggccac gggcggattt ggaacagcac ttggggtgat ccattcggcc tatgcccgcg
      601 gtgccataaa aacagtgtac gtaggcgaaa cccgtccctg gttgcaaggc gcccgactca
      661 ccgcctggga actcgtgcgc gagggtatcc cggtgacctt gttagcggac agtgccgctg
      721 cttatttgat gcaacggggc cagatcgact gggtcatcgt cggcgccgat cggatcgctg
      781 ccaatggcga tgtggctaac aagatcggta cctatagctt ggctgtagcg gcgcgcgccc
      841 acggtgtcaa atttatggta gtggcaccta cctcgacctt agataaagct ataccaaccg
      901 gtcagtccat ccctatcgag gaaagagcct ccgaggaatt gcttcacctc ggtcgggaac
      961 ccctcgctgc tgccggcgcc aaggcgtgga atccggtgtt cgatattacg cctgctaaac
     1021 tgattgatgt gattgtgact gaaaaaggtg cgatccataa gcctaagacg acgtttcatg
     1081 agatgagctt agaatgactt gtaggctgaa tcgtgatacg gtataaaact gtaggtagca
     1141 acttgggtta tttaagcagg ataagcattc aaagagtggg atgacagttc cgcgctcttg
     1201 atcaggatct ctgcacccct gttcctgccg gtacagacca taaaattcaa cggctcaccc
     1261 caccggctac gggcttctat cattacgtgc tcggcccgct cggcattttc gaacagggcg
     1321 aaccccgtgg gtccccatga gctctggcct atcccttgga cgccctctgc ttttagccat
     1381 cccaatacct cggccacctt cgggctgctg tagcgcccgc cttgggatcc tgagaagtaa
     1441 tcaccgacga tatcctgaat aacggttata ccgccgctga agcggttaaa atcctcttct
     1501 attaaggccg gcaagacttg catgagcagc acacggcaca ggtgcattgc aagcgtggat
     1561 tcgatcggtt cgagcctctt gaaagcggct acttccaatg cgccatttaa gccttgataa
     1621 gcccggtcga agatcagcat gatccgccat ccctcgggaa agggtgtccg gcaaataacc
     1681 gggggtactg tggtgcggtc accttgaccg ccatccacga taaagccacc ttgctcgaat
     1741 gcacctaaac ccacccccga tcgtatccct cgctgcatca atcccgccaa cacccgcaac
     1801 tccatatcca actcatacaa gcgcgcaatg gccgaactca cagccaaggc cagttgcgtg
     1861 ccggaaccga gccccacgtg ttcggggatc gcctccagca cttcgatatg cactcccccg
     1921 gtgagtccca gggcttggaa cagggtctgt gcgtatatgc ttgcgcgttg gttggaggga
     1981 ccgctggccg atatcggggt ggatttggaa acggccagcc gggtgcatat accggacaac
     2041 gtcaggccga gtccaccaaa acgtcgcccg agctcgccgt tcatatccaa aaatcccatg
     2101 tgcagacgcg ccggggcagt aacggttatg ctcatcgtat cttcctccgc catgagcaga
     2161 tcgctgctgt cgtttaagct ggaaatcgtg atctacaact ttacatatta gtctatgccc
     2221 aataaggtga acacagaata tcattccttt tcgaaatcgg gtgctgtccc tctaagccgt
     2281 gaaactggtt ttagtcct
//
LOCUS       DASQSL010001885         3041 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_200612, whole genome shotgun sequence.
ACCESSION   DASQSL010001885 DASQSL010000000
VERSION     DASQSL010001885.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3041
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200612"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            175..1185
                     /locus_tag="VE844_18980"
     CDS             175..1185
                     /locus_tag="VE844_18980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005374584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF475 domain-containing protein"
                     /protein_id="HZC03355.1"
                     /translation="MKHFKYSFIITAVGLIAAFLYGGPFGMLIAAILGVLEVSLSFDN
                     AVVNASVLKDMEPKWQIMFLTVGILIAVFGMRLLFPILIVSIIAQIGFTEVVRMALEA
                     PDLYAQHLQAAHIQIAAFGGMFLLLVFLGFLFDEEKELHWLRPAEDWLSRMGRLASVE
                     VVLALTALIVASYFLPEAGRAGMFIAGISGIILYVLVDSVDALFETEEAGEAAKKTAK
                     RTGFTGFLYLEVLDASFSFDGVIGAFAITKDVIIIMLGLMIGAMFVRSITVYLVRKGT
                     LDEYVFLEHGAHYAIGALAFIMLATMVVHIPEAITGLIGVAFIGLAVYSSVRYRQQQA
                     SP"
     gene            1224..1799
                     /locus_tag="VE844_18985"
     CDS             1224..1799
                     /locus_tag="VE844_18985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020655466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerD family protein"
                     /protein_id="HZC03356.1"
                     /translation="MTISLNKGGNISLTKEAPGLKSIRVGLGWDVRLTEGAAFDLDAS
                     VFMLNAGGKVRSDADMIFYNNLKSVDGSVEHLGDNLTGVGEGDDEVVNVALDKIPAEV
                     EKLAFVITIHEAETRKQNFGMVSKAFARIVNDVGGTELARFDLTEDMSTETAMIVGEV
                     YRHTNEWKFRAVGQGHAGGLGALAKNYGISV"
     gene            1880..2329
                     /locus_tag="VE844_18990"
     CDS             1880..2329
                     /locus_tag="VE844_18990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013220959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HZC03357.1"
                     /translation="MALKWLKDQLNSIQGTLKGEMMRFKNATLLEGIVAGCAAVAYAD
                     GVASPEEKQKMMGFIRQSEALSVYDTNKVIELFNKYMGKFEFDTMIGKAEAMQAIGRV
                     KKPEEARLLVRVCCMIGAADGNFDDNERALVTDICRELDLNPKDFDL"
     gene            2352..2936
                     /locus_tag="VE844_18995"
     CDS             2352..2936
                     /locus_tag="VE844_18995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013033903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerD family protein"
                     /protein_id="HZC03358.1"
                     /translation="MAVQLTKGQRISLKKEGETGLSRIIMGLGWDAVKSKGFFGLGGG
                     QKSIDLAASCVLFNEADQIVDVVWFRQLRSRDGSIQHTGDNLTGAGEGDDEQIIVDLD
                     RVPAHIKSLIFTVNSFTGQNFSEVENAFCRVVNAANNEELARYNLSTRGNHTAMIMLK
                     VYRRNGEWKAHAIGDNTSGRTFQDLMPAMRPHLA"
BASE COUNT          666 a          742 c          907 g          726 t
ORIGIN      
        1 gtggtcgatg cggacccgcc ccccaccgca cccgaatcgg tatcgggctg ggagaagatc
       61 ccggcggaat ggcggccgtg gctgctcctt gccttcgggt tcatcgtgct tgggatcgtc
      121 ggggtagtcg cggtgggtcg atcacggcgt gacaaaccca agaaatactc cttcatcaaa
      181 catttcaaat actccttcat catcacggca gtgggcttga tcgccgcctt tttatacggt
      241 ggtcctttcg gtatgttgat tgcggcgatc ctcggggtgc tcgaggtgtc gctgtccttt
      301 gacaatgcgg tagtcaacgc ttctgtgctc aaggatatgg aacccaaatg gcagatcatg
      361 tttttgaccg taggtatact cattgctgtt ttcggcatgc ggctcttgtt ccctatactc
      421 atcgtctcta ttattgcgca gattggtttt accgaggtgg tgcggatggc gctagaggcc
      481 cccgatctct atgcccagca cctgcaagca gcgcatattc aaattgccgc ctttggtggt
      541 atgttcttac tcttggtgtt tttgggcttt ctgttcgatg aggagaagga gttgcattgg
      601 ctcaggcccg ccgaggactg gttgtcgcgc atgggcaggc tggcgtcggt cgaggtcgtg
      661 ctcgcgctta cggccttgat cgtggcaagc tattttctgc cggaggcggg gcgtgccggt
      721 atgttcattg cgggcatcag tggtattatt ctttatgtgt tggtggatag tgtggacgcg
      781 ctatttgaga ccgaagaagc cggggaggcc gcgaagaaga cggccaaacg cacgggattc
      841 acgggctttc tttatctcga ggtcctggat gcgagcttct ctttcgatgg tgttatcggc
      901 gctttcgcca tcaccaagga tgttattatt attatgcttg gcctgatgat cggtgccatg
      961 ttcgtgcgct cgatcaccgt ttacctggtg cgcaaaggca cgctggatga atacgtattt
     1021 ctggaacacg gtgcacacta cgccattggg gcgcttgcct ttatcatgct agcgaccatg
     1081 gtggtgcata ttcctgaggc catcaccggg cttatcgggg tggcctttat cgggcttgcc
     1141 gtctactcct ccgttcgtta ccggcagcag caggcaagcc cttgatcccc catttactcg
     1201 aaacctgaaa ggagggactg acaatgacaa tctcattaaa taaaggcggc aatatatcgc
     1261 ttactaagga ggctcctggc ctcaaaagta tacgcgtagg tttgggctgg gatgtacgcc
     1321 tgaccgaggg tgcagctttc gacctcgatg ccagtgtatt catgctgaac gcggggggca
     1381 aggtgcgatc ggatgcggat atgatctttt ataacaacct taaatccgtc gatggctcag
     1441 tggagcacct gggtgacaac cttaccggtg tcggcgaggg tgacgacgag gtcgtcaatg
     1501 tggccttgga taagatcccg gctgaggtcg aaaaactggc attcgttatc accatccacg
     1561 aagcggagac acgcaaacag aattttggga tggtaagtaa ggcctttgca cgtattgtca
     1621 atgacgtggg aggcaccgag ctcgcccgct ttgacctgac cgaggatatg agcacagaga
     1681 cggcgatgat cgtcggtgag gtctatcggc acaccaatga gtggaagttc cgagcggtgg
     1741 gacagggtca tgccggcggc cttggcgctt tggccaagaa ctatggtata agtgtctgat
     1801 atctcgcgta aagtcactgt ttcccctccc ccaggcgggg agggggcctt ccccactaac
     1861 ctttaaggag acaacgcata tggcgcttaa atggcttaaa gaccagctca actctatcca
     1921 gggtacgctc aaaggggaga tgatgcggtt caaaaatgct accctgctcg agggcatcgt
     1981 cgctggctgc gcggcggtgg cttatgccga cggggtagcc tcgcctgagg agaagcagaa
     2041 gatgatgggt tttatccgcc aatccgaagc cctgagtgtg tacgacacca acaaggtcat
     2101 cgagctgttc aacaagtata tgggcaaatt cgagttcgat actatgatcg gcaaggcgga
     2161 agcgatgcag gcgattggcc gcgtgaaaaa acctgaggaa gcgaggttac tggtgcgggt
     2221 atgttgcatg atcggtgccg ccgacggtaa ctttgatgac aatgagcggg ctctggtgac
     2281 cgatatttgc cgggagctgg atcttaatcc caaagatttc gacctttaaa tgttcaataa
     2341 ggggaaaaaa tatggccgta caacttacca aaggtcagcg catctcgctt aagaaggaag
     2401 gcgagacggg cttgagcagg atcatcatgg gacttggctg ggatgcggtc aaaagcaagg
     2461 gattttttgg ccttggcggt gggcaaaagt ctatcgattt agccgcctct tgcgtgttgt
     2521 tcaatgaggc cgatcagata gtcgatgtcg tatggttcag gcagctgcgg agccgagacg
     2581 gcagcattca acataccggt gataatctca ccggggcagg tgagggagac gatgagcaga
     2641 tcatcgtcga tctcgatcgc gtaccggctc acatcaagtc cttgatattc acagtaaata
     2701 gctttactgg ccagaatttc agcgaggtgg aaaacgcctt ctgtcgcgtg gtaaatgccg
     2761 ccaacaatga ggagctcgca cgctacaatt taagcacccg aggtaaccat acagcgatga
     2821 tcatgctcaa ggtatatcgc cgtaacggcg agtggaaggc gcacgccatt ggcgataata
     2881 caagcggacg aacctttcag gatctgatgc cggcaatgcg tccgcacctt gcctgagcct
     2941 ctccacgccc caactaccgc aaggggaggc aaaatcagct gaatcccctg gaagggggaa
     3001 gaaaggggtg tgggtgctga gcgccgtcct cctgctgctc g
//
LOCUS       DASQSL010001886         1167 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_52969, whole genome shotgun sequence.
ACCESSION   DASQSL010001886 DASQSL010000000
VERSION     DASQSL010001886.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1167)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1167)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1167
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52969"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..894)
                     /locus_tag="VE844_19000"
     CDS             complement(<1..894)
                     /locus_tag="VE844_19000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006475156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/UbiB family protein"
                     /protein_id="HZC03359.1"
                     /translation="MLTPGQFLRLLSIQRVLIHHRLDEIILATHLFRPLRFLLYLLPW
                     NWIRQPPATRGERILHALEDLGPIFVKFGQLLSTRRDLIPDDIADALARLRDRVPPFP
                     GTEARGIIEAAYGGPLSTIFSEFEEQPLASASIAQVHAARLQNGREVVVKVVRPGIKK
                     LIRRDLSLLYIAAELSEQYWQDGRRLRPVRLVAEFEKTILDELDMIREAANASQLRRN
                     FRGSLEFYVPAIEWELIRREVMVMERVCGIPIDDLKALQAAGIDLRQLARIGIEIFFT
                     QVFRDQFFHADMHPGNLFVLPS"
     gene            complement(904..>1167)
                     /locus_tag="VE844_19005"
     CDS             complement(904..>1167)
                     /locus_tag="VE844_19005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sterol-binding protein"
                     /protein_id="HZC03360.1"
                     /translation="EEVLSYYLGDIPAHQLGRAYRTSASWLEQSRETLELDLTEYLKT
                     ETAILPDQDDVNGFIEAVDRLRTDVDRLEARLKRLERQLVRVP"
BASE COUNT          271 a          359 c          323 g          214 t
ORIGIN      
        1 ggacggcagc acaaagagat tgccgggatg catgtcagca tgaaagaact ggtcccggaa
       61 cacctgggtg aaaaatatct cgatgccgat ccgggccagt tgcctgagat cgatcccggc
      121 ggcttgcaag gccttaagat cgtcgatcgg gatcccgcat acccgttcca tcaccatgac
      181 ctcccggcgg atgagttccc actcgatagc gggcacataa aattctagcg agcctcggaa
      241 gttccgccgt aactgggaag cattggccgc ctcccggatc atgtcaagtt catcgaggat
      301 ggtcttctca aattcagcca ccagccgcac gggtctgagc ctccggccat cttgccagta
      361 ctgctcagag agctcggcag cgatgtagag caagctgaga tcccgccgga tgagcttttt
      421 gatcccagga cgcacgacct tgaccaccac ctcccgccca ttctgcaaac gtgcggcatg
      481 gacctgggca atcgaggcag aggccagggg ttgctcctca aactcactga agatcgtgct
      541 caacgggcct ccataggcag cctcgatgat cccgcgcgcc tcggtccccg gaaagggcgg
      601 cacccgatcc cgaagcctcg ccaaggcatc ggcgatatcg tcggggatca gatcccggcg
      661 ggtggagagc agctgaccaa acttgacaaa gataggaccg agatcctcga gtgcatgcag
      721 gatgcgctcc ccacgcgttg ccgggggctg gcgtatccag ttccacggca gcaaatacaa
      781 caaaaaccgc aaggggcgga acagatgggt ggcgaggatg atctcatcca accggtgatg
      841 gatcaatacc cgctggatac tcaaaagccg taaaaactgg ccgggcgtaa gcatgctcgt
      901 tggctaaggc accctgacca actgcctctc gagccgtttc aaccgcgcct cgagccgatc
      961 cacatcggtg cgcaacctat ctacagcctc gataaacccg ttgacatcgt cttggtcggg
     1021 cagaatagcg gtctctgtct taagatactc ggtaagatcg agttccaggg tctcacggct
     1081 ctgttccaac cagctcgccg aggtccgata cgccctgccc aactgatgcg caggaatatc
     1141 accgaggtaa tacgacagca cctcttc
//
LOCUS       DASQSL010001887         1282 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_107935, whole genome shotgun sequence.
ACCESSION   DASQSL010001887 DASQSL010000000
VERSION     DASQSL010001887.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1282
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107935"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            119..>1282
                     /locus_tag="VE844_19010"
     rRNA            119..>1282
                     /locus_tag="VE844_19010"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          287 a          330 c          433 g          232 t
ORIGIN      
        1 acaagtcaat gcactgagaa catggacaac gtgttctggt gccagttggc tgctgcgggt
       61 gagtagccca acgcagccga ctctccgatc tagggcctgt ttccacaggt ctgagatctc
      121 gatggagagt ttgatcctgg ctcaggacga acgctggcgg cgtgcttaac acatgcaagt
      181 cgagcgaggt ccacccggtg gcaacaccgg ggaagaccta gcggcgaacg ggtgagtaac
      241 acgtgagcaa cctgccccga agactgggat aacaccggga aaccggtgct aataccggat
      301 gtcctcctct ggtcgcatgg cctagggagg aaatggattc cgcttcggga ggggctcgcg
      361 ggctatcagc ttgttggtga ggtaacggct caccaaggcg acgacggcta gctggtctga
      421 gaggacgacc agccacactg ggactgagac acggcccaga ctcctacggg aggcagcagt
      481 ggggaatctt gcgcaatggg cgaaagcctg acgcagcaac gccgcgtggg ggatgaaggc
      541 cttcgggtcg taaacccctt tcagcaggaa cgaaattgac ggtacctgca gaagaagccc
      601 cggccaacta cgtgccagca gccgcggtaa tacgtagggg gcgagcgttg tccggattta
      661 ttgggcgtaa agagctcgta ggcggcttgg caagtcgggt gtgaaacctc caggcttaac
      721 ctggagacgc cactcgatac tgccatggct agagtccggt aggggaccac ggaattcctg
      781 gtgtagcggt gaaatgcgca gatatcagga ggaacaccgg tggcgaaggc ggtggtctgg
      841 gccggcactg acgctgagga gcgaaagcgt gggtagcaaa caggattaga taccctggta
      901 gtccacgccg taaacgttgg gcactaggtg tggggcctta tcaacgggtt ccgtgccgta
      961 gctaacgcat taagtgcccc gcctggggag tacggccgca aggctaaaac tcaaaggaat
     1021 tgacgggggc ccgcacaagc ggcggagcat gttgcttaat tcgatgcaac gcgaagaacc
     1081 ttacctgggc ttgacatgtc cgcgaccgac gtggaaacac gtcttccctt cggggcgcgg
     1141 tcacaggtgg tgcatggctg tcgtcagctc gtgtcgtgag atgttgggtt aagtcccgca
     1201 acgagcgcaa cccttgtcct atgttgccag cgggtaatgc cggggactcg taggagactg
     1261 ccggggtcaa ctcggaggaa gg
//
LOCUS       DASQSL010001888         1444 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_52993, whole genome shotgun sequence.
ACCESSION   DASQSL010001888 DASQSL010000000
VERSION     DASQSL010001888.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1444
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52993"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            190..417
                     /locus_tag="VE844_19015"
     CDS             190..417
                     /locus_tag="VE844_19015"
                     /inference="COORDINATES: protein motif:HMM:NF021073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HZC03361.1"
                     /translation="MPGTNSQGNNASGNYARYLYLGFTLVLILSVLVVVGFFVDKLLG
                     TLPLFLLVGLGLGFAGGLYYLYLALEKLGDG"
     gene            414..836
                     /locus_tag="VE844_19020"
     CDS             414..836
                     /locus_tag="VE844_19020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03362.1"
                     /translation="MSAHWRLAARYAAWVSAGAALVGAMVWLLYGEAYAGAFLYGASV
                     GIASFVSTALTVSLLTGRSKAVGVMIGAASFVARYGFAVVALGVPAYLELWPVVAMLI
                     GFAGAYLAENVVLLPGVLMVKRDVGRSVRERAERRVEA"
     gene            842..>1444
                     /locus_tag="VE844_19025"
     CDS             842..>1444
                     /locus_tag="VE844_19025"
                     /inference="COORDINATES: protein motif:HMM:NF012347.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FoF1 ATP synthase subunit a"
                     /protein_id="HZC03363.1"
                     /translation="MVALMQVSQEELQKQILHTWEDAKETGIFGIPVIELHVGPVDLS
                     INKIIWFLWIGAAVTFLILFIGSRLLKDRPGAYRVIVEELYGFGRKFLGGQMGEEGQK
                     WMPYTLSLFIFLLTLNLIGLIPNSYPVTSNITFTLVLAVMTLILYHYQGIRRNGVGTY
                     FKTFVPPNMPAKPLMVPFMFLIEALQQFVTQPLTLGMRLYA"
BASE COUNT          249 a          400 c          462 g          333 t
ORIGIN      
        1 cttcaaaatg atcatgaacg ccggcatcga agagatctac tacgccggcg ggtatccaga
       61 cccgctggcc atggagctcg ccgccgaagg gggactcaag atggtccagt tcgcccccgg
      121 caaggactga tcccgccagg agcttgaaac cgtttacagc gctttgttcg gtgcggtata
      181 gtttgggcga tgccgggcac caattctcag gggaacaatg cgagcggtaa ctacgctcgc
      241 tatctctatc tcgggttcac cctggtccta atccttagcg tccttgtcgt ggtcggcttc
      301 ttcgtggata agctgctcgg gacgctgccg cttttccttc tcgtcggtct cgggctcggg
      361 tttgccggag ggctatatta cctgtatctg gcgctcgaga aattgggtga cggatgagcg
      421 cccactggcg gctggctgcc cggtacgcgg cctgggtgtc cgcgggggcg gctctggtgg
      481 gagcgatggt ctggttactc tatggcgagg cttacgccgg ggctttccta tacggtgcca
      541 gtgtgggcat agcgagcttc gtctcgacgg cgctcacggt ctcgctgctg acgggacgct
      601 ccaaagccgt tggggtgatg atcggggcgg cttcttttgt ggcgcgatac gggtttgcgg
      661 tggttgcatt gggggtacca gcgtacctgg aactctggcc ggtggtcgcc atgctgatcg
      721 gcttcgccgg ggcttacctg gcggagaacg tggtgctcct gccaggggtg ctgatggtga
      781 agcgcgacgt ggggcgttcg gtacgtgaaa gggcggaacg gagggtagag gcttgacggc
      841 tatggttgcg ctcatgcagg tgagccagga agagcttcag aaacagatcc tgcacacctg
      901 ggaggatgcc aaagagactg gaatctttgg catcccggtc attgaactac acgtaggtcc
      961 tgtagacctt tccatcaaca agatcatctg gttcttgtgg atcggggccg cggttacgtt
     1021 cctgatcctg tttatcggga gcaggttgct caaggaccgg cccggcgcgt accgggtgat
     1081 cgtggaggag ctctacggct tcgggcgcaa attcctcggc gggcagatgg gcgaggaggg
     1141 acagaagtgg atgccctaca cgctctccct cttcatcttt ttgctgacgc tgaatttgat
     1201 cgggctgatc ccgaactcct atccggtgac gagcaacatc accttcaccc tggttctggc
     1261 ggtcatgacg ctcatcctct accattacca gggcatcagg cgcaacggcg tgggaacgta
     1321 cttcaagacc ttcgtgcccc ccaatatgcc cgccaagccg ctcatggtcc cgtttatgtt
     1381 tcttattgaa gccctccaac agttcgttac ccagccgctc acgctgggaa tgcgactcta
     1441 cgcc
//
LOCUS       DASQSL010001889         1503 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_37693, whole genome shotgun sequence.
ACCESSION   DASQSL010001889 DASQSL010000000
VERSION     DASQSL010001889.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37693"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1222
                     /locus_tag="VE844_19030"
     CDS             <1..1222
                     /locus_tag="VE844_19030"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZC03364.1"
                     /translation="DAVKQNLMRIQDPKIGGSMHRGAIKSIDTVDVVDKYTVRINLSI
                     PDASLPANVLHYPTNMQAPDNFDNSSNHPIGTGPFKYVSWQRYTETRLERFENYWETD
                     AQGNQLPYLDGIIGRPKREDAVRLTALRAGEVNLIDNMAYASVDDFKAKYGDEYNAWL
                     LHLGGVFVEYNWRSDIFKNKNLRIAATHAIDREAIHHAVFFGQARMLTQPYPPGNPWH
                     LEGYKVREFDPDKAASMIKKERALGTEIVLLCRTEPNYNVQCAEVIQNLWTSVGFKVR
                     IDPIDQAIEDERLSRGDFHAHIQGNSYRFDPDGFFDRNLHSKSAYGRIRHGWYNERYD
                     KLVEEAKRIADPAKRRELYTEAWNIVHEELPQFHLHELSAVSAAHKSVQGYQPADVAA
                     FTYRQGGVRTAYIA"
     gene            complement(1303..>1503)
                     /locus_tag="VE844_19035"
     CDS             complement(1303..>1503)
                     /locus_tag="VE844_19035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016861523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS4/IS5 family transposase"
                     /protein_id="HZC03365.1"
                     /translation="VSQGIKKHRGRPIKKGVPRFQAERTFTWFQKKYRRWVVRWERLV
                     ACFEAFLAIATIHIWIQRLIVG"
BASE COUNT          353 a          413 c          409 g          328 t
ORIGIN      
        1 cgacgcggtg aagcaaaatc tcatgcgcat ccaagatccc aaaatcggtg gcagtatgca
       61 tcggggtgcg atcaaaagta tcgacacggt ggatgtggtc gacaaataca cggtgcggat
      121 caatttgagc attccggatg cgtcgctgcc ggccaacgtc ttgcactatc ccaccaacat
      181 gcaagcgccg gataattttg acaattcctc aaatcacccg attggcacgg gacccttcaa
      241 gtacgtttcg tggcaacggt acaccgagac tcggctcgag cgctttgaga actactggga
      301 aacggatgcc caaggcaatc agttgccgta tttggatggt attatcggcc gacccaaacg
      361 cgaagatgcc gtgcgtctga cggcactccg cgccggcgag gtcaacctca tcgataacat
      421 ggcttacgcc agcgtcgacg atttcaaagc caagtatggc gacgagtaca atgcctggct
      481 cctccacctg ggcggggttt tcgtggagta caactggcgt tcggatatct ttaaaaacaa
      541 gaacctgcgc attgccgcga cacatgccat cgatcgcgag gcgattcatc atgcggtgtt
      601 tttcggtcag gcgcgcatgc tcacgcagcc ctatccaccg ggtaatccct ggcacctgga
      661 gggatataag gtacgggaat tcgatcccga caaagctgca tcgatgatta aaaaagaaag
      721 ggccttgggc actgaaatcg ttttgctctg ccgtaccgag cccaactaca atgttcagtg
      781 tgccgaggtc atacagaatc tgtggaccag tgttggtttc aaagtgcgca ttgatcctat
      841 agaccaagcc atagaggatg agcgcttatc ccgaggcgat ttccatgccc acatccaggg
      901 caatagctac cgtttcgatc cggatggttt cttcgaccgc aatctgcact ccaagagtgc
      961 ttacggtagg atacgacacg ggtggtacaa cgagcgctac gataaactgg ttgaggaggc
     1021 caaacgcatt gctgacccgg ccaaacgtcg ggagctgtac accgaggcct ggaatatcgt
     1081 gcatgaagag ctccctcagt ttcacctgca tgaactgagt gcggtctccg ccgcacacaa
     1141 gtccgtgcag ggctaccagc ccgccgatgt ggcggccttt acgtaccgtc aaggtggtgt
     1201 ccgtaccgct tacatcgcgt gattgttagt tgatgatatc aggtctcatc gggattgtac
     1261 cgtgcgcgta agggcgccga cgggctgcgg cgtttgcatg aattatccca ctattagcct
     1321 ttggatccag atgtgaatcg tagcaatggc aaggaacgct tcaaagcatg ccacgaggcg
     1381 ctcccagcgg accacccagc ggcggtactt cttctggaac caggtaaacg tgcgctccgc
     1441 ctggaaccgc ggcacccctt tcttgatcgg tctgccacgg tgtttcttaa taccttgcga
     1501 aac
//
LOCUS       DASQSL010001890         1852 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_118746, whole genome shotgun sequence.
ACCESSION   DASQSL010001890 DASQSL010000000
VERSION     DASQSL010001890.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1852
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118746"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..363
                     /locus_tag="VE844_19040"
     CDS             <1..363
                     /locus_tag="VE844_19040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019018188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyanophycin synthetase"
                     /protein_id="HZC03366.1"
                     /translation="GQLWCVFGCGGERDSGKRPLMGQVAEALADHLILTTDNPRSEAP
                     AVIVQGILSGIKRKDRICIELDRAKAIEQAMLQAHEEDTVLVAGKGHEAYQEIQGRRL
                     PFSDSEVVRRVIERRAFA"
     gene            360..1712
                     /gene="murF"
                     /locus_tag="VE844_19045"
     CDS             360..1712
                     /gene="murF"
                     /locus_tag="VE844_19045"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018954242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HZC03367.1"
                     /translation="MIQFYLSDIAGPLQAVLTGENIEFCGCSTDTRTLQPAELFIALK
                     GGRFDGHGFVAQARESGAAAAMLEHPVDVALPALVVGNTRAALGQLAALWRSRFTVPI
                     VAVTGSNGKTTVKEMLAAILSLKGAVLATRGNLNNDIGVPQTLCRLGGQHDYAVIELG
                     ANHPSEIARLCELARPTVSVITQCAPAHLEGFGSVEGVARAKGELFAGLTETGVAVIN
                     ADDGFAGVWRRLAGARRQVSFGLETQAEVSARGVESGLAESRFRLITPEGSAEVRLLF
                     PGRHNVMNALAAAGCAYALGIEPEAIARGLSAAQPVPGRLNLCQGPLGVRLLDDTYNA
                     NPGSLKTALEVLAGYPGDRWLVLGDMGELGPEGQRYHREAGLLARRSGVSRLYAVGEL
                     SCYAVEEFGQGGRHFSDIEGLVAALNQDLHKEAALLIKGSRSMRMERVVQSLQQDRRS
                     "
     gene            1717..>1852
                     /locus_tag="VE844_19050"
     CDS             1717..>1852
                     /locus_tag="VE844_19050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012637346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HZC03368.1"
                     /translation="MLLPLTEYLTRFHSGFNVFHYITLRTILGVLTALAIAFLVGPFM
                     I"
BASE COUNT          353 a          507 c          606 g          386 t
ORIGIN      
        1 gggcagctgt ggtgtgtatt tggctgcggc ggtgagcggg atagcggcaa acgaccgctc
       61 atggggcagg tggcggaagc cctggccgat cacctcatat tgaccactga taacccgcgt
      121 agcgaagcgc ccgccgtgat cgttcaaggg atcctgtccg gtataaagcg caaagatcgg
      181 atctgcatcg agctcgatcg cgccaaggcc atcgagcagg cgatgttgca agcgcatgaa
      241 gaggacaccg tgctggtcgc aggcaagggc catgaggcct atcaggagat ccaaggtcgg
      301 cgcttgccct ttagcgatag tgaggtggtg cgtcgcgtga ttgagaggcg ggccttcgca
      361 tgattcagtt ctatctttct gacatcgctg gtccattgca agcggtgcta acaggagaga
      421 atatcgaatt ttgcggatgc agcacagaca cccgcaccct gcagccggcc gagttattta
      481 ttgccctcaa gggagggcgc ttcgatggcc acggttttgt ggcacaggcc cgagagagcg
      541 gcgccgctgc agctatgctc gaacacccgg tcgatgtggc cttgcctgcg ctcgtggtcg
      601 gcaatacccg ggcggcgctt gggcagctgg cggctctgtg gcgtagccgg tttacagtcc
      661 cgatcgtcgc cgtcaccggg agcaatggaa aaaccaccgt caaagagatg ttggctgcga
      721 tactctctct gaaaggcgcg gtcctcgcca cccgggggaa cctcaacaat gatattgggg
      781 tgccgcaaac cctctgtagg ctcggggggc aacacgacta cgctgtgatc gagctgggcg
      841 ccaatcaccc gagcgagatc gcgcggctct gcgaactggc gagacccacc gtcagcgtga
      901 tcacccagtg cgcaccggcc catctcgaag ggtttggatc ggtagaaggt gtggcccgag
      961 ccaagggaga gctatttgcg ggcctcaccg agacaggtgt ggccgtgatc aatgccgacg
     1021 atgggtttgc cggtgtgtgg cggcgcctag ccggcgcccg caggcaggta agctttggtc
     1081 ttgagacgca ggccgaggtg agcgcgaggg gagtggagag cgggcttgcg gaaagccgct
     1141 ttcgcttgat taccccggag ggatcggctg aggtgcggct tctcttcccc ggccggcata
     1201 atgtgatgaa cgccttggca gccgccggtt gtgcctatgc gctcggtatc gagcccgagg
     1261 ctatcgctcg ggggcttagc gctgcccaac ctgtgccggg acgtttgaat ctctgccaag
     1321 ggcccttggg agtgcgcctc ttggacgaca cctataatgc caatccgggt tcacttaaga
     1381 ccgcgctcga ggtgcttgcc ggctatccgg gggatcgctg gctcgtgctc ggagatatgg
     1441 gcgagcttgg tcccgaagga caacgctatc atcgggaagc ggggttgctt gcccgcagat
     1501 ccggggtgag ccgcctttat gcggtcgggg aattgagttg ctatgcagtg gaggagttcg
     1561 gtcaaggagg ccggcatttt tccgatatcg aaggattggt cgcggccttg aatcaagatc
     1621 ttcataaaga ggcggccctc ttgattaaag gttcccgctc gatgcgcatg gaacgggttg
     1681 tccagtcttt acaacaagat agaagaagct aaccccgtgt tattgcccct gacagaatac
     1741 ctcacccgct tccatagcgg ttttaacgtc tttcactata taacgctgcg cacgatactc
     1801 ggggttttga cagcgctggc tatcgccttt ttggtcggac ccttcatgat cc
//
LOCUS       DASQSL010001891         1035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_107974, whole genome shotgun sequence.
ACCESSION   DASQSL010001891 DASQSL010000000
VERSION     DASQSL010001891.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107974"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1017
                     /gene="rlmD"
                     /locus_tag="VE844_19055"
     CDS             <1..1017
                     /gene="rlmD"
                     /locus_tag="VE844_19055"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: protein motif:HMM:TIGR00479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HZC03369.1"
                     /translation="QLQHIGGVRPVSILPPLTGPVWDYRHKARLTVRYVEKKAKLLIG
                     FKEKGGRRVADLSRCEVLHPSVGQKLTELGILLGKLSLYKQIPQVEVAVGEDSTALVI
                     RHLAPLSDHDQEQLKRYAELHRMSIYLQAGGPETVELLWPKDARPLHYRLPAEDIEIY
                     FEPTDFTQVNPAINRALVGWVVELLNPKPDECVLDLFCGLGNFTLPIARHAGWVLSIE
                     GQASLVERARRNAEYNKINNVDFEVMDLADENLEAAFIPSYFDKVLLDPPRTGAREII
                     ERLEFKGVKRLVYVSCNPATLARDARILMHARGFLLAAAGVLDMFPHTTHVESIALFI
                     RDPP"
BASE COUNT          223 a          267 c          303 g          242 t
ORIGIN      
        1 caactgcagc atatcggcgg ggtaagacct gtttccatcc tgccgccctt gaccgggccc
       61 gtatgggatt accggcataa ggcccggtta acggtgagat atgtcgagaa aaaagcaaag
      121 ttgcttatcg gttttaagga gaaaggcggt cggcgggttg ccgatctgtc gcgctgcgag
      181 gtgttgcacc cgtctgtggg acagaagctt accgaattgg ggatactgct cggtaaactc
      241 agcctctata aacagatccc gcaggtcgag gtcgcggtgg gggaggatag cacggcgctc
      301 gtgatccgcc acctcgcgcc gctatccgat catgatcagg agcaactcaa gcgctatgca
      361 gagctccatc ggatgagcat ctacctgcaa gcaggggggc ctgagaccgt ggagctatta
      421 tggcctaagg acgctcgccc gttacactac cgattgcccg ccgaggacat tgagatctac
      481 tttgagccca ctgactttac ccaggtgaat ccggcgatta atcgggcctt ggtcggctgg
      541 gtagtggaat tgctaaaccc caagccagac gagtgtgtgc tcgatctctt ttgcggtttg
      601 ggcaatttta ccttgccgat cgctcgtcat gcgggttggg tcctgagtat agagggtcaa
      661 gccagcttgg ttgaacgggc gagaaggaat gcagagtaca acaagatcaa taacgtggat
      721 tttgaggtta tggatctggc ggatgaaaac ctcgaggccg cctttatccc tagttacttt
      781 gataaggtac tcttggatcc gccccgtacc ggagcccgcg agatcatcga gcgcctggaa
      841 ttcaaagggg ttaagaggct tgtgtatgtc tcgtgtaatc cggctaccct ggcccgtgac
      901 gcccggatct taatgcatgc aaggggtttt cttctcgccg ctgcaggtgt cctcgatatg
      961 tttccccata ccacccatgt cgagtccata gcgctgttta ttagggaccc gccctaaaag
     1021 agtatgccct ctgga
//
LOCUS       DASQSL010001892         1871 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_93640, whole genome shotgun sequence.
ACCESSION   DASQSL010001892 DASQSL010000000
VERSION     DASQSL010001892.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1871
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93640"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(150..1625)
                     /locus_tag="VE844_19060"
     CDS             complement(150..1625)
                     /locus_tag="VE844_19060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03370.1"
                     /translation="MIHPTPTKTLLTTTFESLVMQLSGLLARGTRLLDQFVHAEPTPE
                     TTMAFERELSALLREVGRRIMTWTLNRIEPDDNPEARLRVSLEGRLYRRRRQHPRVVG
                     TLFGPVTLWRRLYEPLGHRGRSIHPFELRLGIEAGLATPALAERVGYWATDHTQNEVL
                     EMVQRDHGVSWSCTSLRKVLGSLRAGMAPHREGAQVEQVLGWIEQARAAKGRFRPTLS
                     VGRDGIFVPLRGGVAQEGATATLCVLDRRGKRVGTAYLGQMPESGQGTITDQLSSLLK
                     TVLSRVDSHSLRLVDVTDEGHHPSTYYHRVLKHMSDPRRPWRCLEWIRVVDFYHACGY
                     VQQLADTIFGSADEAQSWAKQMRHVLKTKADGVARVLKSASALRRRRGLCGQAKLYDT
                     AYRYLKQRSQWMRYHLYKRQGLALGSGITQAACKIVFTQRLKRSGMSWTIEGGQMILD
                     LRVIRLSGVWHEVHQRYLASKPLPVSCIDRSKAAQHRPLAA"
BASE COUNT          388 a          564 c          545 g          374 t
ORIGIN      
        1 tgcctcggtg caggcatctt tttcctccac ctctttagca ggatcgtgtg ccgttgcatc
       61 agcatccttc tctggcagga tttccgctac ccagcgccgg tatgggcgga gccattgcag
      121 aggggtgtga tcgcttcctt cccagccccc tatgccgcta atggccgatg ttgagcggcc
      181 ttactcctgt cgatacaaga gacaggcaac ggttttgagg ccaagtagcg ctgatggacc
      241 tcatgccaga caccgctcaa ccggatcaca cgcagatcca aaatcatttg gcctccctca
      301 atcgtccatg acatccccga gcgtttgagc cgctgtgtaa acacgatttt acaggcggct
      361 tgcgtgatgc cagaacccag cgctaagccc tgacgcttat agaggtgata gcgcatccac
      421 tgagagcgtt gtttgaggta gcgataggcg gtatcgtaaa gcttggcctg accacaaaga
      481 cctcgacgac gccgcagcgc cgacgccgac tttaataccc gagcgacacc atcggccttg
      541 gtcttgagca catggcgcat ctgcttggcc caactctgcg cctcgtctgc cgacccgaaa
      601 atggtgtcgg ccagctgctg cacgtatccg caggcatgat aaaaatcgac aacccgtatc
      661 cattccaagc aacgccaagg gcggcgcgga tcgctcatgt gcttgaggac acggtggtaa
      721 taagtgctgg ggtgatgacc ttcatcggtg acgtcgacca agcgcaggct gtggctatcg
      781 acccgactta aaaccgtctt gagcaggctg ctgagctgat ccgtgatcgt cccctgtccg
      841 gattcaggca tctgccccag gtaagccgtc cctacccgct tgccccttcg gtcgagcacg
      901 cagagcgtgg cggtggcccc ctcttgtgcc acgcccccgc gtagcggcac aaagatgccg
      961 tcgcgcccaa ccgatagcgt cggccgaaag cgccccttgg cggcacgggc ctgctcgatc
     1021 cagcctaaca cctgctcaac ctgggcacct tcgcggtggg gagccatccc cgcacgcagg
     1081 ctcccgagca ccttgcgaag ggaggtgcat gaccacgaaa cgccgtggtc tcgctggacc
     1141 atctcgagca cctcgttttg ggtgtggtcg gtggcccagt agcccacgcg ctcggctaga
     1201 gccggggtag ccaggcccgc ttcgatcccc aggcgtagtt caaaaggatg aatggagcga
     1261 cctcgatggc caaggggttc gtagagccga cgccacaagg tcaccggccc aaagagtgtg
     1321 cccacgacac gagggtgttg gcggcggcgg cgatagagac ggccctccaa cgacacccgc
     1381 aaccgggcct cggggttatc gtcaggttcg attcggttga gcgtccacgt catgatccgt
     1441 cggccaacct cgcgaagcaa cgcactgagc tctcgttcaa acgccatagt ggtttcgggt
     1501 gtcggctcgg cgtggacaaa ctggtcaagg agccgggtgc cccgggcgag caaacccgaa
     1561 agctgcatga caagggactc aaaggtcgtt gtcaacaggg tcttggttgg cgtaggatgg
     1621 atcatggagg gactccgagt tggtgttatg atagagatga agacttccat catttcacca
     1681 aatgtgtccc ttcgagccaa ccctattcat gctgaccaga tgctaggctc acatggggac
     1741 ggcgatttcc aatgccagac agagcatacc gcggggaata gcgcgataac acccattgaa
     1801 attaaagcat ttaagtgctg tctgggaatc gctgtcaggg tgaccaacgg acttctgttt
     1861 ttcaggtgtg c
//
LOCUS       DASQSL010001893         1269 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_53012, whole genome shotgun sequence.
ACCESSION   DASQSL010001893 DASQSL010000000
VERSION     DASQSL010001893.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1269
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53012"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            4..225
                     /locus_tag="VE844_19065"
     CDS             4..225
                     /locus_tag="VE844_19065"
                     /inference="COORDINATES: protein motif:HMM:NF036933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03371.1"
                     /translation="MLIPPFEQSLASYTVTTPASGFSTNFINIVAPAAAVGAITLDGT
                     EHISHVLEAATRNGEQFVIEASPHAGASL"
     gene            complement(709..906)
                     /locus_tag="VE844_19070"
                     /pseudo
     CDS             complement(709..906)
                     /locus_tag="VE844_19070"
                     /inference="COORDINATES: protein motif:HMM:NF036933.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
     gene            complement(903..>1269)
                     /locus_tag="VE844_19075"
     CDS             complement(903..>1269)
                     /locus_tag="VE844_19075"
                     /inference="COORDINATES: protein motif:HMM:NF036933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IgGFc-binding protein"
                     /protein_id="HZC03372.1"
                     /translation="GSFISSDKPVAVFGSHRCANIPPGGVACAHLVEQLPPTVTWGKS
                     FVTMPLATRLNGDTFRLLVSFESTNVLVNGAPVAMLNRGQFDELIITGPAQISADQPV
                     LWPNTPTAARSMTSHLIPS"
BASE COUNT          288 a          363 c          381 g          237 t
ORIGIN      
        1 atgatgttga tcccaccgtt cgagcaatcc ctggccagct acacggttac caccccggca
       61 tcaggatttt ccaccaattt tatcaacatc gtggcacccg ctgcggcagt tggggccatc
      121 actctcgatg gcacggagca catctcgcac gtcctcgagg cagcgactcg aaatggtgag
      181 cagttcgtca tcgaggcgag cccacatgcc ggtgcaagtc tgtagggcac cgccgaccat
      241 atacatcaga gccaattggt cggccacggt gttgacagtg agggcgttag tgccatcgct
      301 gaagtgcaag atgggctcga tccacatctg ggtcgccgta gcagagatag tccccaccga
      361 ggccacaatc gtgtccgtcc caagattgac cccgctagag caaaatgtcg cctgcccacc
      421 gtcatctgtc gacgcaaaac ccgctgtcgg gttgactcct gtaatggtga aatccaccct
      481 gatgcccggt accggattgg cgctttgatc gctgacggtc gcgaccacac aacgctcggt
      541 gcccacggga ttggtggccg tttccggcgt cagcgtgagg ttggcgacaa tgaccaccgg
      601 cgccagggac atacctcctg gatagccata ggaatcaaag tcggtaaaac catacacaaa
      661 caccccaaag gggaggggac ccagtaatgt atgggacccc gagggcactg gcacctgcgc
      721 ccccaataat ccgctggtgc cggtgggcgc aaacgtcgat ggcggaatgg ccgtgccatc
      781 gagagtgatg gccccaactg ccgcagcggg tgctacgatg ttgataaaat tggtggaaaa
      841 tcctgatgtc ggggtggtaa ccgtgtagct ggccaggaat tgctcgaacg gtgggatcaa
      901 catcatgaag ggattagatg tgacgtcatc gaacgagctg ccgttggagt attgggccac
      961 aagaccggct ggtcggcact gatctgagcc ggacccgtga tgatcagctc gtcgaattgg
     1021 ccgcgattca gcatggccac cggcgctccg ttgacgagga cattggtgct ctcgaacgac
     1081 accaggaggc ggaaggtatc accattcaag cgcgtggcca gaggcatggt gacaaagctc
     1141 ttcccccatg tcacagtggg cggcagttgt tccacgagat gggcacaggc gacacccccc
     1201 ggagggatat tggcacatcg atgactgcca aagacggcca caggcttatc ggaggagatg
     1261 aagctgcca
//
LOCUS       DASQSL010001894         1126 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_200693, whole genome shotgun sequence.
ACCESSION   DASQSL010001894 DASQSL010000000
VERSION     DASQSL010001894.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200693"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..978)
                     /locus_tag="VE844_19080"
     CDS             complement(<1..978)
                     /locus_tag="VE844_19080"
                     /inference="COORDINATES: protein motif:HMM:NF033547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HZC03373.1"
                     /translation="MPVLSYIHHLFNVDQCHAYIHTLRWKDRPFQCPRCQSQDVDPWG
                     MYHYRPGCKRDRCNGCQRTFNDLTDTLLHQSKRSLPYWILATFLLCLACSSRRIAREL
                     GIHIRTSYRWCWWLRNAALSYERHRQLQGTVEADDLYHTAGNKGQAKRGGKKYLGRRA
                     RGRRKKREPGRGHYDKDRPAIIVWVSRQGAVVIQATRDFTVQTVQKAADLAVQAGCRL
                     YPDSASSYRALKGYLHEYVNHTLKEYARGDVHENRAECLFSLLKPYLRVFRGVSKFNL
                     PGYVGFFQFLRNFRQHNACEQAELILQAALDPAMGRRARQGEFVRCFDHF"
BASE COUNT          224 a          317 c          344 g          241 t
ORIGIN      
        1 gaagtggtca aaacacctga caaattctcc ctgtctggct ctcctgccca tggcggggtc
       61 gagcgctgcc tgcaagatca gttcggcctg ctcacaggca ttgtgttgac gaaagttgcg
      121 caggaactga aagaacccga cgtatcctgg gaggttgaac ttgctgacac cccgaaatac
      181 ccgcaggtag ggtttaagca aggaaaacag gcactcggcc cgattctcgt gcacgtctcc
      241 acgcgcgtat tctttcagcg tgtgattgac gtactcgtgc aggtagcctt tcagggcccg
      301 atagctgcta gcggagtcgg ggtagagccg acagccggct tggacggcga ggtctgcggc
      361 cttctgcacg gtctgcacgg tgaaatcgcg ggtcgcctgg atgacaacag ccccctggcg
      421 actgacccag acgatgatgg ctggccgatc tttgtcgtaa tggccacggc ctggctcgcg
      481 cttcttacgg cgaccacggg ctcggcgtcc cagatacttt tttcctccgc gcttcgcttg
      541 ccctttgttt ccagcagtat ggtagaggtc gtccgcttcg accgtcccct gcaattggcg
      601 atgcctttca taggacaggg ccgcattccg cagccaccag caccagcgat agctggtccg
      661 gatatggata cccagctctc gggcaatgcg ccgcgacgag caggcgagac acagcagaaa
      721 cgtcgccaga atccagtaag gcagcgaccg cttgctctgg tggagcaggg tatcagtgag
      781 gtcattgaag gtgcgctggc aaccgttaca ccggtcgcgt ttgcacccgg ggcggtagtg
      841 gtacatgccc cacggatcga cgtcctggct ctggcaccgg ggacattgga agggacgatc
      901 tttccaccgt agcgtatgga tgtaggcgtg acactggtcg acgttgaaca ggtggtgtat
      961 gtacgagagc accggcatgg atgagcctct cctgtggtcg tgagattggg gcagacacag
     1021 cgaggagatt ctcacctatt gcacacgttt gtgcgctgct acaaactgcg ataaattgag
     1081 cgaagtgagt tgctaggttg gaccactctc ctgatttcct gcccag
//
LOCUS       DASQSL010001895         2333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_173062, whole genome shotgun sequence.
ACCESSION   DASQSL010001895 DASQSL010000000
VERSION     DASQSL010001895.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173062"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..584)
                     /locus_tag="VE844_19085"
     CDS             complement(<1..584)
                     /locus_tag="VE844_19085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HZC03374.1"
                     /translation="MSIEDLLAQLPGSAALVTSTRRLSGDLLRRYHAQKFKGGLTIWE
                     TPDIVPWGDWIERCWQGSQSLDDPRLLLSPLQAQTVWRYVIGESVEAKALLQIEATAQ
                     LAAEAWDLLHQWRLPWSAIEAFAGEDARAFARWAQRYAEISRTQGWLDRARLPEALSE
                     QLQAGRIGAPPSLILAGFLDLTPQQQFLLKTLEA"
     gene            647..1909
                     /locus_tag="VE844_19090"
     CDS             647..1909
                     /locus_tag="VE844_19090"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair exonuclease"
                     /protein_id="HZC03375.1"
                     /translation="MKFIHCADLHLDSPLQGLTRYQGAPVDEMREATRRAFEQLIALA
                     LQEPVEFVVIAGDLFDGDWPDFNTGLFFVDQMVRLNEAGIKVFMVRGNHDAESRITRD
                     LPLPSNVIVLPTMRPHTILDEGLGVAVHGQSFSHGKVTDDLAFNYPLRCTGYFNLGIL
                     HTSLTGREGHANYAPCKVDTLLSKGYDYWALGHVHRREIVHCDPWIVFPGNTQGRMIR
                     ELGAKGCELVTVSDSKVSTEHRSLDVMRWESLAVDMAELDNLDDVFERVRRELGQLLH
                     NAEGRTMVARVVVRGRGKVHAEITARPETVRAQIQALALDETNGQVWVEKVSLKTQAE
                     IDLASLNRRDDPIGELVRLIHGIKAGSTEDLASLATELSDLRRKLPVALTEGDEAIRL
                     EDPEFLRQVLDEVERSLIPRLLGLAGNP"
     gene            1906..>2333
                     /locus_tag="VE844_19095"
     CDS             1906..>2333
                     /locus_tag="VE844_19095"
                     /inference="COORDINATES: protein motif:HMM:NF024904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZC03376.1"
                     /translation="MKFAKLYLKSFGPFTGKWLNFEQAGSDLHLIYGPNEAGKSSLLR
                     AVGALLFGIPERTFDNFLHDNTVLRIGGVLMRSDGRRLPFMRRKGRSKTLLSWEEAQA
                     DQGTSSILEDSALQEFLGVLDAAQFRDMFGLDHDRLVQGG"
BASE COUNT          475 a          656 c          705 g          497 t
ORIGIN      
        1 tgggcctcca gggtcttaag cagaaactgt tgctggggag tcagatctag aaagccggcc
       61 aatattaagg atggcggggc gccgatccgg ccggcttgca actgctccga cagggcttcc
      121 ggcaggcgcg ctcgatcaag ccagccttgc gtccggctga tctcggcgta gcgttgcgcc
      181 caacgggcaa aggcgcgggc gtcctcaccg gcaaatgcct ctatggcaga ccagggcaac
      241 cgccactggt gcaacaaatc ccacgcttcc gcggccagct gagcggtggc ttctatctgc
      301 aacagcgcct tggcctcgac cgattcgccg ataacatacc gccacacggt ctgggcctgg
      361 agcggactca gtaataagcg cgggtcatcg aggctctgcg atccctgcca gcagcgctcg
      421 atccagtcgc cccacggcac gatgtcgggc gtctcccaga tcgtaagccc gcccttgaac
      481 ttttgagcat ggtagcggcg taggagatcg ccgctcagcc ggcgggtgct ggtgaccagg
      541 gctgcagaac ctggtagttg agcgagtaga tcctctatac tcatcggtat ggccgcttat
      601 gcaactataa ccccatgcga gcaatattaa cggattaata ccagctatga aattcattca
      661 ctgcgccgat ctccatctcg acagtcccct gcaggggctt acccgctatc agggtgcgcc
      721 ggtggacgag atgcgggagg cgacccggcg tgccttcgag cagctcatcg cgctggcgct
      781 acaagaaccc gttgaattcg tggtgatcgc cggggatctg ttcgacggcg actggccgga
      841 cttcaacact ggcctgttct tcgttgacca aatggtgcgc ttaaacgagg ccggtatcaa
      901 ggtgttcatg gtgcgtggca accatgatgc ggaaagccgg atcacccgcg atcttcccct
      961 gccatccaat gtgattgtgc tgcctaccat gagaccccat accatccttg atgagggcct
     1021 tggggttgcc gtccatggcc aaagcttctc ccacgggaaa gtgaccgatg atctggcgtt
     1081 caattatccc ctgcggtgca caggttattt taatcttggg atcttgcata cgtctttgac
     1141 cggccgcgaa gggcatgcga attatgcccc ctgcaaggtg gatacactgc tctccaaggg
     1201 ttacgactat tgggccttgg gccatgtcca caggcgcgag atcgtgcatt gcgacccctg
     1261 gatcgtattt ccgggcaata cccagggccg gatgatccgc gagctcgggg ccaagggttg
     1321 tgaattggtt acggtctcag atagcaaggt aagcactgag caccgttccc tggatgtcat
     1381 gcgctgggag tccctcgcag tcgatatggc tgagttggat aacttagacg atgtcttcga
     1441 gcgagtacgt agggagctcg gacagttgct ccacaatgcc gagggacgta cgatggtagc
     1501 ccgagtggtg gtccgtggac gcggcaaggt ccatgctgag ataaccgcaa gaccggaaac
     1561 agttcgcgct cagatccagg ccctggccct cgatgaaacc aatggccagg tctgggtgga
     1621 gaaggtctcc ctaaaaactc aggcggagat agatctcgcc agcctcaacc ggcgtgatga
     1681 tccgatcggc gaactggtac ggcttattca tgggatcaaa gcggggagca ccgaggatct
     1741 cgcgagcttg gccactgagc tgagtgatct gagacgcaaa ttaccggttg ccttgaccga
     1801 gggcgacgag gctatccggc tcgaagatcc tgaatttctc cggcaggtgc tcgatgaggt
     1861 cgagcgcagt cttatcccgc gcttgctcgg tttggcgggc aatccatgaa gtttgcaaaa
     1921 ctttatctca agtcgtttgg accgttcacc ggcaaatggc tgaatttcga gcaggcaggg
     1981 agcgatctgc atctgatcta cggtcctaac gaggccggca aatcttcgtt actgcgggcg
     2041 gtcggcgcct tgctctttgg tatccccgag cgtactttcg acaattttct gcacgacaac
     2101 accgtgctcc gcattggtgg tgtattgatg cgcagcgatg gacggcggct ccccttcatg
     2161 cgtcgcaagg gccgaagtaa aactctgctt tcatgggagg aagcgcaagc cgatcaggga
     2221 acctcttcga tcctcgaaga cagcgctctg caggaattcc tgggggtgct cgatgcggca
     2281 cagttccgcg atatgtttgg cttggaccat gaccggttgg tccagggggg taa
//
LOCUS       DASQSL010001896         1060 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_93661, whole genome shotgun sequence.
ACCESSION   DASQSL010001896 DASQSL010000000
VERSION     DASQSL010001896.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93661"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..304
                     /locus_tag="VE844_19100"
     CDS             <1..304
                     /locus_tag="VE844_19100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013873457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HZC03377.1"
                     /translation="QYTSRSFRDMALANGIIPSVGHTGICFDNAMAESFNATIKKELI
                     HLHTWPTLSKVKKEVFHYIEVYYNRKRPHSRIGNLAPCEAEHNWYQEFDKELPYAG"
     gene            complement(551..>1060)
                     /locus_tag="VE844_19105"
     CDS             complement(551..>1060)
                     /locus_tag="VE844_19105"
                     /inference="COORDINATES: protein motif:HMM:NF012870.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HZC03378.1"
                     /translation="VADFTYVSTWAGTVYTAFAVDVFSRKIVGWKTSMSKETGLVLER
                     IEMGLHARDYREQNEGCKLVHHSDAGSQYTSFRFTQHLVDSGVDASIGTVGDALDNAL
                     AESLIGLYKTELIKPRRPWHNREEVDVATAAWVDWYNNRRFHGACQGRPPVEFETLYE
                     LGDLISLVA"
BASE COUNT          221 a          311 c          309 g          219 t
ORIGIN      
        1 ccaatacacg agccggagct tccgggacat ggcgttggcg aacgggatca tcccgtcggt
       61 cggacacact ggtatttgct ttgataatgc catggcggaa tcgttcaacg ccaccatcaa
      121 gaaagaattg atccacctgc acacctggcc gacgctgagc aaggtgaaga aggaagtctt
      181 ccactacatc gaggtgtact acaatcgcaa gagaccgcac agcaggatag gcaacctcgc
      241 gccgtgcgag gccgaacaca actggtacca ggaatttgac aaggaattgc cgtacgcggg
      301 ataattacag tgtctacgaa agcggtaggt ctccagtctt gcccgctgag gtccccgctg
      361 ccgccggttc ggcgccggta gtaggtgcgt gccgctgggg ccaggctgag gctgtcaggg
      421 tgcggctcaa ccgctgtttg ctcctccagc gacagtcttg cttccacggt cagcagttcg
      481 tagtaggtgc cggtgagttc gctgccggcg actgaaccac cccgggttcg gtagagactc
      541 gttgttgggg tcaggcgacc aggctgatca gatcgcccaa ctcgtacagg gtctcgaact
      601 ccaccggtgg cctgccttgg caggctccgt ggaatcgacg gttgttgtac caatccaccc
      661 atgccgcggt ggcaacgtcg acctcttctc tattgtgcca tggcctgcgg ggtttaatca
      721 actcggtctt gtacaagcct atcagtgatt ccgcgagagc gttatcgaga gcgtcgccga
      781 ccgtgccgat cgaggcatcg acaccggaat cgaccaagtg ctgggtgaac cggaacgacg
      841 tatactgact accagcatca gaatggtgaa cgagcttgca tccttcgttt tgttcccggt
      901 agtctctcgc gtgaaggccc atctcgatcc tctccaggac aaggccggtc tccttggaca
      961 tgctcgtttt ccagccgacg attttccggg agaacacatc gacggcgaac gcggtgtaca
     1021 ccgtgccagc ccacgtcgac acgtacgtga aatcggccac
//
LOCUS       DASQSL010001897         1168 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_150393, whole genome shotgun sequence.
ACCESSION   DASQSL010001897 DASQSL010000000
VERSION     DASQSL010001897.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1168
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150393"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            751..1065
                     /locus_tag="VE844_19110"
     CDS             751..1065
                     /locus_tag="VE844_19110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03379.1"
                     /translation="MYLAPDDRATGTGAGVDSGISTLVQSLQDQIAYLRQEAEDWKEE
                     ARRKDTIILSLTQRLPELQAPVESPGGLQTASEGPTKCNLRGQQEPSQRRSWPHRFYF
                     GP"
BASE COUNT          250 a          315 c          367 g          236 t
ORIGIN      
        1 tgcctttggg ccagtggttg aaggggagga tgcccggccc ggcgactgcg cgcgagaggg
       61 gagaagctac taggaggcag cgagtacctc ttcttcagtg cggccgtcga gggtgagctt
      121 gtgcccctct tcgcacatga atattgcacg cctagagcgc cattcttctt cgggtccgag
      181 aaggatcacc ttctcttcgc actcttcgca cgtaaggacg ctttgctgct ctgaaaaacg
      241 ctgcacgtgt acgcacctcc ttcgcccttc agggcatcgc ccctcttagg ggcctcgcgt
      301 ttgccgtagg tttggcgagc cgttgggcta cgcagaaggc aacttcgcac actcgcggga
      361 caggcacaag atcaacgatg ctctacttca atctacttat gctcgacgcc aagctcacta
      421 accacttcaa tagaacctga ggttgaggtt tagccttgtg ttgatgcctc cgatcgacgt
      481 ggggacaggg ctttagacca ttcccaatat gttgccattc ctcaaagtgg tcatatacac
      541 gtctatgtac gcaatggcag agggtgcgca ggcacgaata ggcaagagtg ctcgctgagg
      601 ggggtatacg tgggcgtgta cgagaagatg gacaggctta cggtagtaga ggcggcagcc
      661 aggctgggag tcaaagaaca agccatcaga aagaggatct agcgaggtac cattgctcac
      721 gacaaggatg gcgacgacgg gggcgtacac gtgtatctag ccccggacga tcgggccacc
      781 ggtacgggtg ccggtgttga cagcggcata agtacgctgg tccaaagtct gcaggatcag
      841 attgcgtacc tacggcaaga ggccgaggac tggaaggagg aggctcgccg caaggacacc
      901 atcatcctgt ccctgaccca gcgcctcccc gaactgcaag cacccgtaga gtcaccagga
      961 ggcctgcaga cggcctcgga gggcccgacc aagtgtaacc tacgggggca gcaggagccc
     1021 tcacagcggc gctcatggcc gcacaggttc tatttcgggc catgaaaggg atggtggggg
     1081 ttcgacgagt cctgtatcta gtgaccctgt gtgcgctggc tgtgttgatg gttgtgccgg
     1141 tagcttcggc acagggtttg tatgacaa
//
LOCUS       DASQSL010001898         1815 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_150394, whole genome shotgun sequence.
ACCESSION   DASQSL010001898 DASQSL010000000
VERSION     DASQSL010001898.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150394"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..239
                     /locus_tag="VE844_19115"
     CDS             <1..239
                     /locus_tag="VE844_19115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011492198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alcohol dehydrogenase"
                     /protein_id="HZC03380.1"
                     /translation="GAAAEPLQVPGIPLILGRRSIVGWPSGRSIDSQDTLSFSILSGV
                     RAMSEVFPLERAAEAYELMMSGKARFRAVLTVER"
     gene            240..668
                     /locus_tag="VE844_19120"
     CDS             240..668
                     /locus_tag="VE844_19120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03381.1"
                     /translation="MSIKVKVFLSQAAIRVHMLVRASGLAESMSRYLIRRIEQNPAIV
                     LRTHTEVVALEGSHHLEHVCWRDHVAGNIETHDIRHAFVMTGAVPSTQWLDGCVALDA
                     KGFIKTGLDLVAGRFSRRALAACQGSLPPGNKSAWSVRGR"
     gene            891..1340
                     /locus_tag="VE844_19125"
     CDS             891..1340
                     /locus_tag="VE844_19125"
                     /inference="COORDINATES: protein motif:HMM:NF015581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HZC03382.1"
                     /translation="MTSFTQTLEQALGRFDNSPKDLGTDPRSVEERLKESAGEEGLML
                     FNVQEHGKLLNIFGSPRKAKQYVLGNPLIAVTMTRHDIRAGLYAPLRVLVYEADDRST
                     RVEFDQPSSLFGQFNNPEVTTVAQSLDTKLANLIKKAEWLAKESRGA"
     gene            1407..1805
                     /locus_tag="VE844_19130"
     CDS             1407..1805
                     /locus_tag="VE844_19130"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HZC03383.1"
                     /translation="MTEENEKRVRAFYEATVPGHREPLRGLQAPHVVYDLPEGMPIGC
                     GHFEGLQDVLERFLTNFYGAFDVRFVAEEFIAAGEHVVAIGRIQGKTRKAAVPVDVPF
                     VHVWTVREGYLQRLRAFTDTALLAHALAKD"
BASE COUNT          426 a          484 c          534 g          371 t
ORIGIN      
        1 tgggtgcggc ggccgagccg ctgcaagtgc ctgggattcc actaatactg ggaagacgtt
       61 cgatcgtggg ctggccctcc ggcagatcca tcgattctca agatacgctc tctttcagca
      121 tcctcagcgg cgtgcgggcg atgagtgaag tctttccgct ggagcgcgcg gccgaagcct
      181 acgagctaat gatgagcggc aaggcacggt ttcgtgccgt tctcacggtc gagcgctaat
      241 tgagcatcaa ggtcaaagtg tttttgtcac aggccgcgat acgcgtgcac atgctcgtgc
      301 gggcgagtgg gctggcggag agcatgtcgc gctatctgat tcgtcgcatc gaacagaatc
      361 cagccattgt cttgcgaacg cacacggaag tcgtggctct cgaagggagt caccatctcg
      421 agcacgtgtg ttggcgggac catgtagccg gaaatatcga gacccacgac atccggcacg
      481 ctttcgtcat gaccggtgcc gttcccagca cccagtggct cgatgggtgc gtggcgctcg
      541 atgccaaagg gttcatcaag acgggactgg atcttgtcgc aggacgattt agccgccgag
      601 cactggccgc ttgccagggc tccttacctc ctggaaacaa gtctgcctgg agtgttcgcg
      661 gtcggtgatg tccggggtgg caatgtcaag cgcgtggcgt cggcagtggg cgagggctcg
      721 atcgcggtct ccttcgtaca tcgggtgctg catgaatagg aagaagacaa ccatgcctga
      781 cggaacttgc tcgcacggtg gtaaggtttc aatcggagaa aatcacagga gcctaaaaat
      841 ggaacgcaaa attgaagtac gtcacgtgtc cctggaaata gatgccgact ttgacaagtt
      901 tcacccaaac actcgaacaa gccctcgggc gattcgacaa ctctccaaag gatctcggaa
      961 ctgatcctcg gtcggtagaa gaacgcctta aagaatcggc tggagaagaa ggtcttatgc
     1021 ttttcaacgt tcaggagcat ggaaaacttc taaacatctt cggatctcca agaaaagcta
     1081 agcagtacgt tctgggaaac ccactcatcg cggttacgat gacccgtcac gatattaggg
     1141 caggactcta tgcgcccctg agagtgttgg tctacgaagc cgacgaccgg tcgacgcgag
     1201 tcgaatttga tcagccctct tccctcttcg ggcaattcaa taacccagag gtcacgaccg
     1261 tggctcaatc tctggataca aaattagcaa acctgatcaa aaaggctgaa tggttagcaa
     1321 aagaatcccg aggcgcctaa tttagaggag agacgtgacg gaaccggagg gacgggcatg
     1381 aagataaaga aagggaggag aagagaatga ccgaagaaaa cgagaagcgc gtccgcgctt
     1441 tctacgaagc tactgtccca ggacatcgcg agccgctgcg aggtctccaa gcgccacacg
     1501 tcgtatacga tttgccggaa gggatgccca tcggatgcgg ccatttcgag ggtctccagg
     1561 atgtgctcga gcgctttctc accaacttct atggagcttt tgacgttcgc ttcgtcgccg
     1621 aagaattcat cgccgcgggc gagcatgtcg tcgcgatcgg tcgtatccaa ggaaagaccc
     1681 gaaaagctgc cgtgcccgtc gatgtgccct tcgtccacgt ctggacagtc cgtgaggggt
     1741 atctccaacg actgcgggct ttcaccgaca cagcactgct agcccatgcg ctggcgaagg
     1801 actgaactgt tcgag
//
LOCUS       DASQSL010001899         1293 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_37737, whole genome shotgun sequence.
ACCESSION   DASQSL010001899 DASQSL010000000
VERSION     DASQSL010001899.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37737"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..988
                     /locus_tag="VE844_19135"
     CDS             <1..988
                     /locus_tag="VE844_19135"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HZC03384.1"
                     /translation="GGVLAEAGLVLPLEDAYQQRGWDTYEWAKQRATYNGTLYGVPDQ
                     VEEIVLYYNKDLKPEVPKTVEELRQIADGLRGRGIIPFAFGNQEQWPAGHVFSIGVSN
                     VLGREGLDDILYADGRWDTPEVEEAIYLFFRDFVESGFYPEGLSALGYDGANALFYSG
                     EAAMNTTGTWLVPEIVQTVQDFEVGFFPFPSIEGSGISPPAGVGAGLFVAKEASTPQG
                     AIAFIDYLLEDSTARLAIEKLNVIPAQPVNTKGLDVPELFKEVLEDLSASPEAKSFGY
                     NIDVLAPQNFNEVMFRGFEEVLDGRRTPAEQSLALQDAWAEAKKEGNIATQG"
BASE COUNT          302 a          326 c          403 g          262 t
ORIGIN      
        1 cggcggtgtg ctggccgagg cagggctggt gctccctcta gaggacgctt accaacagag
       61 aggctgggac acctacgagt gggccaagca gcgcgccacc tacaacggaa ccctctacgg
      121 ggtgccagat caggtagagg agatagtcct ctactacaac aaggacctca agcccgaagt
      181 gccaaagacc gtagaggagc tccgtcagat cgccgacggg ctaaggggac gagggatcat
      241 cccgtttgcc tttggcaatc aggaacagtg gcctgcaggt catgtgttca gcataggggt
      301 tagcaacgtg ctgggcaggg aaggattgga tgacatcctc tacgcagatg gccggtggga
      361 cactcccgag gtagaggaag ccatctacct cttcttcagg gacttcgtgg aaagcggttt
      421 ctacccagaa gggctaagcg ccctgggcta cgatggggcc aacgctctgt tctattctgg
      481 tgaggctgcg atgaacacca cgggcacctg gctcgtcccg gagatcgtcc agaccgtgca
      541 ggactttgaa gttggtttct tcccgtttcc gtccatagag ggctcaggca tctcgcctcc
      601 tgcgggggtg ggggcggggc tgtttgtggc caaggaggcg agcacccccc agggtgcaat
      661 cgcttttatc gattacctgc tggaggacag caccgcccgc ctggctatcg agaagttaaa
      721 cgtgatcccc gctcagccag taaacacgaa ggggctcgat gtgcctgagc tcttcaagga
      781 ggttctagaa gatctctccg catcacctga ggcgaaatcc tttggctaca acatcgacgt
      841 gctggccccg cagaacttca acgaggtgat gttccgtggg tttgaggagg tcttggacgg
      901 gaggaggact cctgcagagc aatctttggc gttgcaggat gcctgggctg aggcgaagaa
      961 ggaggggaat attgcgacgc agggataggc tgagcatgaa gcacaagcca tccggaggtg
     1021 ccatgagaag ttctcaggcc agaaaattgc cgcaaggtat acgttaaacc tgacaggtca
     1081 gcttacatcg gtgagagcat agagaagaag cacgcgttag ggtcaggttg gtgttagaag
     1141 ggccattatg aaacttgaag gatcaaccca tctttaatat ctcgcctgtg aatcaagata
     1201 ttttaaggag tggagccgag gggaatcgaa cccctgacct ccgccgtgca aagtcaaatc
     1261 ctctagttca ggttcgttca tgacagttca aga
//
LOCUS       DASQSL010001900         2437 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_118805, whole genome shotgun sequence.
ACCESSION   DASQSL010001900 DASQSL010000000
VERSION     DASQSL010001900.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2437
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118805"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..317
                     /locus_tag="VE844_19140"
     CDS             <1..317
                     /locus_tag="VE844_19140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020563787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="thioredoxin fold domain-containing protein"
                     /protein_id="HZC03385.1"
                     /translation="VGVLNQAGITVRYLAFPRAGIGSESFLKTVSVWCAKDRNTALTE
                     AKLGKDIPSATCDNPVKAHYESGITVGVKGTPTIILESGEELGGYVPAEKLVQYINGN
                     AS"
     gene            complement(321..1088)
                     /locus_tag="VE844_19145"
     CDS             complement(321..1088)
                     /locus_tag="VE844_19145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007195415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding domain-containing protein"
                     /protein_id="HZC03386.1"
                     /translation="MNDSQPDFIRIQRQFTHYIRDPNRNPAPQDVASRRMRLYRELIY
                     NTIERFLANNFPVLHRITPEDRWQAMVQDYFSRHRAHTPLFPKMAEEFLQYLENERDT
                     RDDPPFILELAHYERMESALTIDTREIDVAGIDPEGDLLAGIPVLSPLVWPRTYHFPV
                     HRITPDFQPMEPGAQPTYLIIYRDRADRVGFMEANPVTARLLEWLLKDEGKTGRELLE
                     LIADEINHPLPEIVIRGGLEILSQLKRRDVILGVRIP"
     gene            1259..1864
                     /gene="gmhB"
                     /locus_tag="VE844_19150"
     CDS             1259..1864
                     /gene="gmhB"
                     /locus_tag="VE844_19150"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: protein motif:HMM:NF006506.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HZC03387.1"
                     /translation="MNQSSTIARLNRAVFLDRDGTINEEVSYLADLTQLRLIEGASAA
                     IGRLNQEAFKVVVVSNQSGVARGYLAEDSVQHVHSALRERLERAHAQVDAFYYCPHHP
                     TEGIGPYRRDCHCRKPKPGMLERAARELQIDLNNSFIVGDRLSDLIAGHAVGCKPILV
                     QTGFGHETQKALIGCPVQPVFIAATLLEACEWILRICEKIS"
     gene            2009..>2437
                     /locus_tag="VE844_19155"
     CDS             2009..>2437
                     /locus_tag="VE844_19155"
                     /inference="COORDINATES: protein motif:HMM:NF037667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03388.1"
                     /translation="MADTQDHGSLFEPMSYKLPEAVRPERYEMRLTPDLNVFTFAGEE
                     TVAVAVREPVNEMVLNAIELTIHTAAIISSEGETLPGIATLDEPNERAVLRFPKRLKP
                     GPWKLYLTFSGILNDKLHGFYRSTYQDPSGRDRILACTQFE"
BASE COUNT          544 a          630 c          690 g          573 t
ORIGIN      
        1 aggtgggggt cctaaatcaa gccggtatta cggtccgtta tctcgccttc ccgcgggctg
       61 ggatcggttc agaatccttc cttaagacgg tctcggtgtg gtgcgccaag gatagaaaca
      121 cggccctgac tgaggcgaag cttggcaagg atattccatc tgcgacctgc gataacccgg
      181 tcaaagcgca ttatgaatcg gggatcaccg ttggcgtcaa aggaacgccg accattatcc
      241 tggagagcgg ggaggagctt ggcggctatg tgcctgcaga aaagttggtt cagtatatta
      301 acgggaacgc ttcgtaattt ttaaggtatg cggacgccga gtatcacatc tcgtcgcttg
      361 agttgggaga ggatctcaag gccgccgcgt attactatct caggtagagg atggttgatc
      421 tcgtcggcga tcagttcgag caattccctt cccgtcttac cttcatcctt gagcagccac
      481 tcgagcagcc gggcggtgac cgggttcgct tccatgaagc ccactctatc cgcgcgatcg
      541 cggtagatga tgagataagt cggttgggcg ccgggttcca tcggttggaa gtccggagtg
      601 atgcgatgga ccgggaaatg ataggtgcgt ggccaaacca aggggcttaa gacggggatg
      661 cccgccaaca gatccccctc gggatcgatc ccggctacat cgatctcgcg ggtatcgatg
      721 gtcagtgccg actccatccg ctcataatgc gctaattcta aaataaacgg tgggtcatcg
      781 cgggtatcac gttcattctc aaggtattga agaaactcct cggccatctt gggaaagagg
      841 ggtgtgtggg ctcgatgccg gctaaagtaa tcctgaacca tcgcctgcca gcgatcctcg
      901 ggggtgattc tgtgcagcac cggaaaatta ttggcgagga agcgctcgat agtgttgtag
      961 atcaactccc ggtaaagcct cattcgtcga gaggccacat cctgcggcgc ggggttccgg
     1021 ttcggatcgc ggatatagtg ggtaaattgc cgctgaatgc ggatgaagtc gggttgcgag
     1081 tcgttcatga ggtctctttc ccaagtatcg acaaaataat accagccacc aagtatgtca
     1141 ttataccctg agcgagtgtc ggtggctttt cactgacttc agttccgcca agacttacta
     1201 gataacccaa gttgcgacct atcgcttatc accgcggctt ctgcgcttta ccaagtcatt
     1261 gaaccagtcc tctaccatag ctaggctcaa ccgggctgta tttctcgacc gtgatggcac
     1321 gattaacgag gaggtgagct atcttgccga tctcactcaa ctgcgcctca tcgagggtgc
     1381 gtcggcggcg attggcaggc ttaaccaaga ggcgttcaag gtggtcgtgg ttagcaatca
     1441 gtcgggtgtg gcgcggggtt atcttgccga ggactctgtg cagcatgtcc attcagcctt
     1501 aagagaaaga ttggaacgtg cgcacgccca ggtggacgcc ttctactatt gcccgcacca
     1561 tcccactgaa gggatcgggc cttacagaag agactgtcac tgccgaaaac caaaacccgg
     1621 gatgctagag cgggcagccc gggaattgca gatcgatctg aacaattcgt tcatcgtggg
     1681 cgatagactg agtgatctca tcgccggtca tgcggtagga tgcaaaccga tcctggtgca
     1741 aaccggtttt ggccatgaaa cgcaaaaggc attgatcggt tgtcccgtcc aaccggtttt
     1801 tatcgctgca acgctgttag aggcctgtga gtggatccta aggatctgtg aaaagataag
     1861 ttgagcattt tttactcagt gttatgatcc cagtatggta gatgctgaga ctgtgcttta
     1921 ggtgcgcacc cagcaaccgt ttgtggtatt aaacttccag taaagcttca tcgcatagtg
     1981 gtgatctacg ttaccccgag gagtcgttat ggccgatact caagatcacg gatctttgtt
     2041 tgaacccatg tcttataagc ttcccgaagc ggtgcgtccc gaacgttatg agatgcgtct
     2101 cacccccgat ctcaacgtat tcacgtttgc cggtgaggag accgtagcgg tcgcggtacg
     2161 tgagcccgtg aacgagatgg tgctgaacgc aatcgagctt acaattcata cagctgcgat
     2221 catctcttcc gagggcgaaa cactgccggg catcgctacc ttagatgagc cgaatgagcg
     2281 ggcagtgctg cgtttcccca agcggctcaa gcccggtcct tggaaactgt acctcacctt
     2341 ttccgggatc ctcaatgaca agctccacgg gttctaccgc agtacctatc aggacccaag
     2401 cggtcgcgac cggatcctcg cctgcaccca gtttgag
//
LOCUS       DASQSL010001901         1283 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_173085, whole genome shotgun sequence.
ACCESSION   DASQSL010001901 DASQSL010000000
VERSION     DASQSL010001901.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1283
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173085"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          286 a          373 c          348 g          276 t
ORIGIN      
        1 gatgaacacc ttctcggacg gatcctcagg agagtagaag atgtcgcccg tttccaagcg
       61 ggcgtcagga aggcgctggt cgagacgctc tatctcctcg gcggagaggg actcgaacac
      121 gtccaccatt tggaggagcc tgatccgctc cccgttaagt gacataaccc ctacaaacgc
      181 acatatttat cggcctcgtg cgataagctg ccagctattt gtagttatct ctgtagtata
      241 aaatatagtc tctacgtctc gctacccgta gacgctcgtg cgtcaaaact ccatctggaa
      301 ctttagggta cgttcttttc cagacacgat gctcttgcac actgcggcgg tagcccgacc
      361 tttgacgaca atcttctgat cccttcgggt gcgcggctat cagcactatc aacagcagga
      421 tgggcacttc ctactccgcc cggcgcctcg gtgagggtgc tgcgcaggtc agcctaggcg
      481 cgccgctcct tgcttcttgc tattggagct cggcgatcta cctcctgggg cgcttttgcc
      541 aacatggcgc caatccgcct cttcgcggtg tctctggaag atcggcattc gcgtcgagga
      601 gtattcgcgc tttgcgtgcc aatctccccg caaccatatg cacttcgacg ctactcctat
      661 cactgatcaa aagcgcgcgg acacgtggca atagttgtca acatcaaaat caagctgaac
      721 ctatacaatg cgcccctact tctaagatgg ggtacgtcca ccaactaggt cttctatgtc
      781 cggtgattcg acgagtctag accgaacgca acatttcggt aatgcctccc aatacctctc
      841 gctttcggga cccgcacctg ctcttcgacg agcgcgcaag ttgtgcttgg tgcagctcct
      901 ttcaacgctc ttgcaacgct cccctagtaa cctttggagg tgatcgaagg caagggaagc
      961 gtaatgatcc acataagagc tcgatggagg cccattcttc tcgtggggga tcgaggccgg
     1021 ccgctaaacg tgatggttga cgaggtagta gcacgggcct cgcggcttat agcaagtcat
     1081 gtagcttcga aagacacgga ttgcttgaga gtccgaagta ccgaaaatga accgggggaa
     1141 ggaaccgaaa ggagcaggga ggccccgtga ccctacagat ggggaagaac cagccgaggc
     1201 ggacggccga gcacgcacca cggcaaccac cggggccggt ctcctactgg ctgatcgccg
     1261 agaaacggaa caacggcata ggg
//
LOCUS       DASQSL010001902         1100 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_173090, whole genome shotgun sequence.
ACCESSION   DASQSL010001902 DASQSL010000000
VERSION     DASQSL010001902.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173090"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            198..>1100
                     /locus_tag="VE844_19160"
     CDS             198..>1100
                     /locus_tag="VE844_19160"
                     /inference="COORDINATES: protein motif:HMM:NF016236.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HZC03389.1"
                     /translation="MRRRTGRVLLWMIAVLVAIELTHRTHVSGASVTTPPTPDHGSQS
                     HLVEPTANSQATQTSKSPAAFESFRTGVSDANIPPEALQLLAWQHGVPATELAQAAPL
                     GDDDFDDEFLEYDPWESFNRAMFNFNQRVDRRILKPVARAWDFVVPDLVQQSLSNAFD
                     NVAMPRRLVNSLLQLKMEGAGRELARFFINISMGVGGFFDAATELGIRRSEEDFGQTL
                     GYYGVGPGPYLVLPFLPPLTVRDGFGFAADAATQPLSYVAPFEASVGMRGGQMINDRS
                     LNLETFEEFEQAVFDLYSAVRNAYL"
BASE COUNT          234 a          315 c          324 g          227 t
ORIGIN      
        1 cactctggca agcattggtg cagcattatc aaatctttca tgttttctaa cgagtactga
       61 gaataccaga gcgatgcttt caggcgcagc agtcggattc cctgcttgac ctctcagaga
      121 ggcacggtta tagtcaaaag cattgtgacc cgccccgaaa gccgacaaca gccctaacac
      181 ccagaaggag ggagcgtgtg cgacggagga ccggtcgagt attgctgtgg atgattgccg
      241 tgctcgtggc tattgaactg acgcatcgaa cacacgtgtc cggtgccagc gttaccaccc
      301 cgccgactcc cgatcacggt tcacagtcac acctggtaga gcccaccgcc aactcacagg
      361 cgactcagac ctccaagagc ccagccgcgt tcgaatcctt ccgcacgggt gtgagcgacg
      421 ccaatatccc gccggaagcc ctgcaattgc tggcatggca acatggcgtg ccggccacag
      481 agctggcgca ggcggcgccg ctgggggatg acgattttga cgatgagttc ctcgaatatg
      541 acccgtggga aagctttaac cgcgcgatgt tcaactttaa tcagagggta gatcggcgta
      601 tcctgaaacc ggtcgccagg gcctgggatt tcgtcgtgcc cgatctggtg cagcagagcc
      661 tcagcaacgc cttcgacaac gtggcgatgc cacgacgctt ggtcaacagc ctcttacagc
      721 tgaagatgga aggcgccgga cgggaactgg cacgtttttt tatcaatatt tcgatgggcg
      781 taggcgggtt cttcgacgcg gcgacggaac tcgggatccg acgcagcgag gaggattttg
      841 gacaaacctt gggatattat ggcgtaggac ctggccccta tctggtctta cccttcctgc
      901 cgccactcac ggtgcgcgac ggcttcggct tcgcagctga cgcagcgacg cagcccttga
      961 gctatgtggc gcccttcgag gcctcagtag ggatgcgcgg ggggcagatg atcaacgacc
     1021 gctcgctcaa cctggaaacc ttcgaggagt ttgaacaggc agtctttgac ctgtattctg
     1081 cggtgcggaa tgcctatttg
//
LOCUS       DASQSL010001903         1051 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_53096, whole genome shotgun sequence.
ACCESSION   DASQSL010001903 DASQSL010000000
VERSION     DASQSL010001903.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53096"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..270
                     /locus_tag="VE844_19165"
     CDS             <1..270
                     /locus_tag="VE844_19165"
                     /inference="COORDINATES: protein motif:HMM:NF024999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03390.1"
                     /translation="QRRQAKVVRQWAAWGKDSDRHWFFGFKLHAVCDPRGQLVSLRIT
                     PGNVADVTQAEALLSQLRGLVVADGAYISTPLREKLWELGSVCKP"
     gene            315..1051
                     /locus_tag="VE844_19170"
                     /pseudo
     CDS             315..1051
                     /locus_tag="VE844_19170"
                     /inference="COORDINATES: protein motif:HMM:NF033580.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
BASE COUNT          232 a          297 c          341 g          181 t
ORIGIN      
        1 cagcgacgcc aggccaaggt ggtgcggcaa tgggctgcct ggggcaagga cagcgaccgc
       61 cactggttct ttggcttcaa gcttcatgcg gtctgcgacc cgcgaggtca attggtcagc
      121 ctacgtatca ccccaggcaa cgtagccgat gtcacccaag ccgaggctct gctcagtcag
      181 ttgcggggac tggtagtcgc tgatggcgcc tacatcagca cccctctgag agagaagctg
      241 tgggaactag ggtctgtttg caaaccttaa aaggatagtt atactccctg ccaaaagcgg
      301 agggggtaaa gttcatgggg cgaggcgatc tgaccgatca gcagtggcaa caactacaac
      361 ccctattgcc tctccaaaag ccgactactg ggcggccagc taaggaccat cgcaccatca
      421 tcaatggcat cctttgggtg ttgcgcaccg gagccccttg gcgagacctg ccggagcgct
      481 atggcccctg gcgcaccgta gccagccggt tctatcgctg gcgccaggat ggcctgtggg
      541 atcggtggct gagggcagta cagcagcagt ccaacattca gaggaaggtg aactgggaac
      601 ttcactatgt ggacggcacc gtgattcgtg cccatcagca cgcggcggga gccaggggga
      661 aaacccagaa ggcgaggctt taggccgcag ccggggaggc ttcagtacca aggtacatcg
      721 gcgggccgaa ggtgggggta agctgattac tctggtgctg actccaggcc agcgtcatga
      781 agctcccgtg ttcccccagt tgagggctca aggtgcagtg aaaggagcca agggcagacc
      841 caggctgagg ccgcaccggg tggtgggaga caagggctac agcagccggg ccatccgcca
      901 ctatgcccgg cagcatggga tcaggatcac catcccgcgc aaagtcaatg agtgtcggaa
      961 aggacctttt gaccgggagg tctacaagca gcgtaacctg gtggagcggc tgatcaacca
     1021 gctgaagcag tttcgacgcc tggccaccag g
//
LOCUS       DASQSL010001904         2172 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_118829, whole genome shotgun sequence.
ACCESSION   DASQSL010001904 DASQSL010000000
VERSION     DASQSL010001904.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2172
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118829"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            100..309
                     /locus_tag="VE844_19175"
     CDS             100..309
                     /locus_tag="VE844_19175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013033107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03391.1"
                     /translation="MQGVRPEIERIHYLLQRDGDEATRAWVERTLRIYREAVTKPGSH
                     ASNPTYRPLFEKAIHEFEEWLATRG"
     gene            456..1391
                     /locus_tag="VE844_19180"
     CDS             456..1391
                     /locus_tag="VE844_19180"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011320806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0002189 - ribose phosphate
                     diphosphokinase complex [Evidence IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HZC03392.1"
                     /translation="MSDSLTLFAGTANPDLAMAVARELGVSLGDCAIERFPDGEVSVR
                     LNEPVRGHEVFIVQPTSPPVNEHLIELLALVDACRRASAAQITAIVPYFGYARSDKRH
                     GRREPITASMVALLLQAVGVEHVVTIDLHAPQIEGFFHIPVDSLTAVPMLADALLGRL
                     PDGIVIAASDANAVRLASRYAHRLKTSVVVLHKQRESGTETKVTHLVGDVRDRPCLIV
                     DDMISTGGTIVEAIEALLESGARPEITVAATHGLLLAGAREKLSHEAVRELLVTDTVP
                     VAMDGWPQLRVISVASLLARALKRLMADGSLSNLY"
     gene            1704..1970
                     /locus_tag="VE844_19185"
     CDS             1704..1970
                     /locus_tag="VE844_19185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03393.1"
                     /translation="MGVFQKRSGREVYGVKIDYEQRRERYHRTGYTASRAKTQYHVSP
                     TDVPATTQKYSQVVELPREAQNIRLHADAKPLPEKYRDALQDVR"
BASE COUNT          462 a          613 c          673 g          424 t
ORIGIN      
        1 atgaagacct tcctcgagac aggtaaggca gcgcacgatg ccgccgcggc tcagaagtag
       61 taaaccgcca tcgatgtttt attacggctc ccatgaagta tgcagggtgt tcggccagaa
      121 atagagcgga tccattacct cttgcagcgc gatggcgatg aggcaacgcg agcctgggtg
      181 gagaggacac tgaggatcta tcgcgaggct gtcaccaagc caggtagcca cgcctcgaac
      241 cccacctatc ggccattatt cgagaaggcg atccacgagt ttgaggagtg gttagccacg
      301 cgagggtagg gttatgccaa gcaaaccggc cgctcttgcg tttctcactc acaggacaac
      361 atttacgctg atccgcgacc gatcagaatg gggagatgcc tgcctcagac ggagttattg
      421 catgattttt cgactaagca agagtgtttt ggagcatgtc cgatagcctc actcttttcg
      481 ccggtacggc caacccagat ctggccatgg cagttgcacg cgaactcggc gtatcgctgg
      541 gagactgcgc gatcgagcgg ttccctgacg gagaagtatc cgtgcggctc aatgaaccgg
      601 tgcgcgggca tgaggtcttt atcgtgcagc cgacctcacc accggtcaac gaacacctca
      661 tcgagctcct ggccttggtg gatgcctgcc gccgtgcctc ggcggctcag atcacggcaa
      721 tcgtacccta ctttggttat gcgcgctcgg acaagcggca tggccggcgg gagccgatca
      781 cggcaagtat ggtcgccctg ctgttgcagg ccgtgggcgt tgaacacgtt gtcaccatcg
      841 acctccatgc gccgcagatt gaggggtttt tccacattcc ggtagacagc ttgaccgccg
      901 tgccgatgct tgcagatgcg ctattaggta gactgcccga cggcatagtc atcgccgcgt
      961 ctgatgccaa cgccgtgcgg ttggcgagta ggtatgcaca tcgtctcaag acctcggtgg
     1021 tcgtgttgca caaacagcgc gagagcggca ctgaaaccaa ggtcacgcat ctggtgggcg
     1081 acgtgcgcga tcgtccctgt ctgatcgtgg atgacatgat ctcaactggc gggaccatag
     1141 tcgaggccat cgaggccttg cttgaatccg gtgcgcggcc tgagatcacc gtggctgcta
     1201 cacatggtct gctgttggca ggcgcgcgcg agaagctctc ccatgaagcg gtgcgcgagc
     1261 tgctggtaac agataccgtc ccagttgcga tggacggctg gccccaactg cgggtcatct
     1321 cggtggcatc tctgctcgcg agggcgctca agcgtttgat ggccgatggc tcattgagca
     1381 atctctattg agccagtttt ttctaaatga tacgcgtgca aggaggattg aagatggatg
     1441 aatttcgcaa gaccgctcag aagatcaacg accgagcccg gcagatcggg accgaagcgg
     1501 attacgacga aaagtggggg gctgaccgat gaaagaggct acccgggaca aggggctatc
     1561 gtcccaccga gtcgaaactc aagggtgggg ccgagaccct gtacctcacc tatgacctcg
     1621 agcagaggat ccgtgggggc ggcagcgccc tctaccccaa ggtcaagcgg gtctatatcg
     1681 caggggaggt aacgggttgg gaggtggggg tatttcagaa gcgttccggg cgggaggtct
     1741 acggggtgaa gatcgactat gagcagcgcc gagaacggta ccatcgcacg ggctacacgg
     1801 cctcgcgggc taaaacccag taccacgtct cgccgaccga cgtcccggcg actacccaga
     1861 agtattcgca agtcgtggaa ctgcctcggg aagcccagaa catccgcttg catgcggatg
     1921 cgaagccgct gccggagaag taccgggacg ccttgcaaga tgttcgttag gccagcccgt
     1981 aagaccgctc gcccgaaacg accaaatcgc cgctaaccaa ccggtcttat cactctctgc
     2041 ttatcacttt aaaaacgcga gcatcttttc aagcggccag cagttgatga tgtcctctct
     2101 ccctgcccac ccgcggcggg cttgggcaat gccgaacggg aggtaggaga ggtgtgcagc
     2161 ggcgtgggca tc
//
LOCUS       DASQSL010001905         2775 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_200787, whole genome shotgun sequence.
ACCESSION   DASQSL010001905 DASQSL010000000
VERSION     DASQSL010001905.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2775)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2775)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2775
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200787"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            60..923
                     /gene="tsf"
                     /locus_tag="VE844_19190"
     CDS             60..923
                     /gene="tsf"
                     /locus_tag="VE844_19190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013221201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HZC03394.1"
                     /translation="MEISSAKVKELRERTGAGMMECKKALVEAGGDIEKAITLMRRSG
                     IAKAAKKAGRIAAEGVIVLAQAPEGQRAAMIEVNCETDFVTKADDFKLFAAALGRCVL
                     HHRPADIAALAQVPLAEGGDTVEACRQQLIAKIGENINVRRFALLETEGGGTLATYLH
                     GNKKIGVLVDLPGGDAVLAKDIALHIAASRPICVTEEQVPADLLAKEQEIYAAQAAES
                     GKPAPIIEKIVAGRLQKFLQEVTLLGQPFVKDPETTVAELLARSPKARVRAFVRFEVG
                     EGIEKKAENAV"
     gene            920..1672
                     /gene="pyrH"
                     /locus_tag="VE844_19195"
     CDS             920..1672
                     /gene="pyrH"
                     /locus_tag="VE844_19195"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018873003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HZC03395.1"
                     /translation="MTESTRIPPVYRRVLIKLSGEALLGEHDYGIDPGVLQRLAWEIK
                     ELMACDIQTAIVIGGGNIFRGTGFAAQGMDRVTADQMGMLATVINALALQDALERIGL
                     FARVMSAIRINQICEDYIRRRAIRHLEKGRVVIFAAGTGNPFFTTDSAASLRAIEINA
                     GLMIKATKVDGVYSADPTQFSDARRYDYLSYDEVLKNKLGVMDATAVVLCRDNAMPLR
                     VVDMTKTGAMMRAVMGEAEGTLVANEPYGAKR"
     gene            1669..2226
                     /gene="frr"
                     /locus_tag="VE844_19200"
     CDS             1669..2226
                     /gene="frr"
                     /locus_tag="VE844_19200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018231132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HZC03396.1"
                     /translation="MINEVMRNAEQRMSKTIEALRQEFSKIRTGRAYPSLLDHIRIEY
                     YGSEVPLSQVATISILDPRTLGITPWDKNMVRVIEKAILSSDLGLNPATSGEVIRVPL
                     PPLTEERRRDLTRVVRAEAENARVAIRNIRRDANHHLKTMVKNKEIAEDEGRRAEEKT
                     QQLTSTYIAKVDELVAAKEKELMEI"
     gene            2254..>2775
                     /gene="uppS"
                     /locus_tag="VE844_19205"
     CDS             2254..>2775
                     /gene="uppS"
                     /locus_tag="VE844_19205"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005959111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl diphosphate synthase"
                     /protein_id="HZC03397.1"
                     /translation="MVGVDRPAQLPRHIAIIMDGNGRWAEQRQLPRIAGHRAGVEAVR
                     GIVRACASKDIEALTLFAFSSENWRRPKQEVGLLMELFMNALQQEIDSLSENHVRFRV
                     IGDASALPGRLQEYIQNAERLTAANQGLALVVAANYGGRWDITQAARVLARKVAAGVM
                     KAEDITEGSVQAHL"
BASE COUNT          655 a          667 c          913 g          540 t
ORIGIN      
        1 tctggatgca gccatagaaa ccgatactca atcggtttaa gcgtgagagg agagcggacg
       61 tggagatttc aagcgcaaag gtaaaagaat tgcgtgagcg caccggcgcc gggatgatgg
      121 aatgtaagaa ggctttagtc gaggcgggcg gggatattga aaaagccatc acgttgatgc
      181 gcagatccgg gatcgccaag gcggcgaaaa aagccgggcg gatcgcagcg gaaggtgtta
      241 ttgtgctggc tcaagcgcct gaagggcaga gggcagcgat gatcgaggtc aattgtgaga
      301 ccgattttgt gactaaagcc gacgatttta agttatttgc tgcggcgctt ggacgctgtg
      361 tcctgcatca tcgccccgct gacatcgccg ctttagccca ggtgccgctg gcggaggggg
      421 gcgatacggt cgaggcttgc cggcagcaac tgatcgccaa gatcggggaa aatatcaatg
      481 tccggcgctt tgctctgctt gaaacagaag gtggggggac actggcgacc tatctacatg
      541 ggaacaagaa gatcggggtg ttggtcgatc tccccggggg cgatgcggtg ctggccaagg
      601 atatcgccct gcacatcgcc gccagccgcc ctatctgcgt gaccgaggag caggtcccgg
      661 cggatctgct ggccaaagaa caggagatct atgccgcgca ggcggccgag agcggtaagc
      721 cggcgccgat cattgaaaag atagtggcgg gaaggctgca gaagtttttg caagaggtca
      781 cactgctggg ccagcccttt gtaaaggatc cggaaactac ggtagcagag ctgttggcgc
      841 ggtccccaaa ggcgcgggtc cgggctttcg tccgcttcga ggtgggtgaa gggatagaaa
      901 agaaagccga gaatgcggta tgaccgagtc gacgcgtatc cctcctgtct accggcgcgt
      961 gctgataaaa ttaagcggcg aagccctgct gggggagcat gactacggta tcgatcccgg
     1021 cgtgctgcaa aggttggcgt gggaaataaa agagctgatg gcgtgtgata tccagaccgc
     1081 tatcgtgatc ggtggcggca atatattccg ggggacagga tttgcggccc aaggcatgga
     1141 tcgggttacg gccgatcaaa tggggatgct ggccacggtg atcaacgcct tagctttgca
     1201 agatgcgttg gagcggatcg gcctgtttgc ccgggtcatg tcggcgatca ggatcaatca
     1261 gatctgtgaa gactacatcc gccgccgggc gatccggcat ctcgagaagg ggcgcgtggt
     1321 gatcttcgcc gccggcacag gaaatccgtt ttttaccacc gactccgccg ccagcttacg
     1381 cgctatcgag atcaatgccg gtctcatgat caaggccacc aaggtcgatg gtgtctactc
     1441 ggccgatccg acccagttca gtgacgctcg ccgctatgac tatctaagtt atgacgaggt
     1501 cttaaaaaat aagctagggg ttatggacgc caccgcggtc gtgctgtgcc gtgacaatgc
     1561 catgcctttg cgggtagtgg atatgaccaa gaccggagcg atgatgcgtg ctgtcatggg
     1621 tgaggcggag ggaacgctgg tagccaatga accgtatgga gcaaagcgat gattaatgag
     1681 gttatgcgca atgccgagca gcggatgtca aagaccatag aagcgctgcg gcaggaattc
     1741 tcaaagataa ggaccggccg ggcctatccc agtctgctcg accatatccg catagagtat
     1801 tacggatcgg aagtgccttt aagccaagtg gctaccatta gcatcctcga tccccggacc
     1861 ttgggcatca cgccgtggga taagaatatg gtgcgggtga tagagaaggc gatattaagc
     1921 tccgatctcg gcttaaatcc agctacaagc ggtgaggtga tccgtgtccc actgccgccc
     1981 ttgaccgagg aacggcgccg ggacctgacc cgggtggtgc gcgcagaggc ggaaaacgcg
     2041 cgggtggcga tccgtaatat acgccgtgac gccaatcacc acctaaaaac catggtgaaa
     2101 aacaaagaga tcgccgaaga tgaagggcgg cgcgctgaag agaagaccca gcagcttaca
     2161 agtacctata tcgccaaggt tgatgaactt gtagcggcca aggagaaaga gcttatggag
     2221 atttgagggg cgtctgaccg atcgcattga taaatggttg gtgtagatag gccagcgcaa
     2281 cttccccgcc atatagctat tatcatggat ggcaatggcc ggtgggcaga gcagcggcag
     2341 ttgcctcgga tagcggggca ccgggccggg gtagaagcag tgcgggggat cgtacgcgct
     2401 tgcgccagca aggatataga ggccttgacc ttatttgctt tcagcagcga aaactggcgc
     2461 cggcctaaac aggaggtggg cctgttgatg gaattattca tgaatgcctt gcagcaagag
     2521 atagacagcc tgagcgaaaa ccatgtcagg tttcgtgtta tcggcgatgc gagcgctttg
     2581 ccagggaggt tacaggagta tatacagaat gccgagcgat tgactgcggc caatcaaggg
     2641 ttggcgctgg tggtagccgc taattacggg ggacgctggg atatcaccca agccgctcgg
     2701 gtcttagcgc ggaaggtggc cgcaggcgta atgaaggcgg aggatattac cgagggatcg
     2761 gtgcaggctc acttg
//
LOCUS       DASQSL010001906         2104 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_93717, whole genome shotgun sequence.
ACCESSION   DASQSL010001906 DASQSL010000000
VERSION     DASQSL010001906.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2104
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93717"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..979
                     /locus_tag="VE844_19210"
     CDS             <1..979
                     /locus_tag="VE844_19210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF853 domain-containing protein"
                     /protein_id="HZC03398.1"
                     /translation="LRAKLDIALFTPGHAAGHPLAISVAPEGMADLLPTERDQAAKLS
                     AAALASMMNYRSAAMDQAKLAVLIQAIRIFPEVRPQTPITLEALIDFINAEDPSLIRA
                     VGVLDTRHFKRLVENLQTLQIMNGDLLAAYPDRLDARLLFGFPPFAIPSKTRLSIIST
                     KFLGDKRAVLFWVAQLLSELGRFANKSPASNLQGIVLFDEADLYLPALSKPPTKEPME
                     NLLKRARSAGLGLLLATQSPGDFDYKCKENLHAWFVGLVKEKTALEKMKPMLSESRVD
                     VSAKLPGQEVGHFFLIKGGQAQAIHAERSLIKILQLSEAETLSLAQVSF"
     gene            complement(999..1316)
                     /locus_tag="VE844_19215"
     CDS             complement(999..1316)
                     /locus_tag="VE844_19215"
                     /inference="COORDINATES: protein motif:HMM:NF012593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HZC03399.1"
                     /translation="MTLYEAMAALFLAQATGFSLDLPQQMVIILASIMAGVGVAGIPE
                     AGLIVLPLVLGAAGLPEAVVVAAIPLVMPVDWIIARCRSVVNVLSDMVVAILLDRNLA
                     KVP"
     gene            complement(1205..2044)
                     /locus_tag="VE844_19220"
     CDS             complement(1205..2044)
                     /locus_tag="VE844_19220"
                     /inference="COORDINATES: protein motif:HMM:NF012593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HZC03400.1"
                     /translation="MICLVNVSVALALGLTIMNTFEPGKAWSGKLQEMVAGLQQPVSP
                     LAKPDETPQATLNPLKNLAAYIPESLTEPFLKNNVITVVLLGILVGAAVRRVKYRQHA
                     ANQNSIAALEQGVEAIYQVLIQMLNWVVQAIPFAVFGVVAHVVGKTGLELFKLLWIFL
                     VTIITGLAIHSLIYYPLLAWWIGKKPPQVYLKGGADAIVTGFSTNSSLATVPLTLRCL
                     TENMGISERSARLSACVGPISTTMASPCMKRWRPCFWLKPQDLALIYPNRWSSYWPRS
                     WPG"
BASE COUNT          485 a          607 c          557 g          455 t
ORIGIN      
        1 cttgcgcgca aagctcgaca tcgccctgtt tacgccagga catgccgctg gtcacccgct
       61 ggcgatctcg gtggcgcccg agggtatggc cgatctcctc cccacagaac gagatcaagc
      121 ggcgaaactt tcggctgcgg cgctcgcttc gatgatgaac tatagatccg cggcgatgga
      181 tcaagccaag ctcgccgtct taatccaggc catccgcatc ttccctgagg ttcgaccaca
      241 aactcccatc acgcttgagg cgctcatcga cttcataaac gcggaggatc cctcgttaat
      301 cagggctgtg ggtgtgctgg atacgagaca tttcaagcgg ctcgtggaaa accttcaaac
      361 cctgcaaatt atgaacggcg atcttctggc cgcctatcct gatcggctgg atgcgcggct
      421 tctatttggt tttccgccgt tcgctattcc ctccaaaaca cgtctgagta ttatcagcac
      481 caagttcctt ggcgacaaaa gggccgtcct cttttgggtt gctcagcttc ttagtgagct
      541 tggtcgcttt gccaataaaa gccctgcgtc aaacctacag ggcatcgtgc tgttcgacga
      601 agccgatctg tatctgcccg cgctctccaa gcctcctacc aaagaaccga tggaaaactt
      661 gctcaagcgc gctcgctcgg ccgggctcgg ccttttgctt gcgacccaaa gcccagggga
      721 ttttgattac aaatgcaaag aaaacctcca tgcctggttt gtggggctgg tcaaagaaaa
      781 gaccgcgcta gaaaagatga aaccgatgtt atccgagagt cgggtggacg tgagtgcaaa
      841 attgcctggt caggaggtgg gacacttctt cctcataaaa gggggacagg cgcaagcgat
      901 ccacgcggag cgatcactca taaagatcct gcaactgtcc gaagccgaga ccctctcgct
      961 cgcgcaagtc tctttctgat ccccccacga cactggcttt acggcacttt ggctaagttc
     1021 cgatccaaga ggatagcgac caccatgtcg ctcaatacat tcaccactga ccggcaccgg
     1081 gcgatgatcc agtcgaccgg catcaccaaa ggaatggcgg ccaccaccac cgcttcgggc
     1141 aagcccgccg cgcccaagac taaaggcagg acgatcaatc ccgcctccgg gatcccagcg
     1201 acacctaccc cggccatgat cgaggccaat atgatgacca tctgttgggg taaatcaagg
     1261 ctaaatcctg tggcttgagc caaaaacaag gccgccatcg cttcatacag ggtgatgcca
     1321 tcgttgttga gattggtcca acacaggctg aaagccgtgc cgagcgttcg cttatgccca
     1381 tgttttcggt caagcaacgc aaggtaagcg gtacagtggc gaggctgctg ttggtagaaa
     1441 atcccgtgac gatcgcatct gcgccccctt tcaaatacac ttgaggtggc ttttttccta
     1501 tccaccaggc gagcagggga taatagatta gactatggat agccagtcct gtaatgatgg
     1561 tcacaagaaa gatccataaa agcttaaata attccaggcc ggttttgccc accacgtgcg
     1621 ccaccacgcc gaacaccgcg aagggtatcg cttgcaccac ccagttcagc atctggatca
     1681 ggacctgata aatggcttct accccttgtt caagcgcggc gatactgttt tggttcgccg
     1741 cgtgctgacg atacttgacg cgccgcacag cagcccctac cagaatgccg aggagcacga
     1801 cggtgatcac gttgttctta agaaagggct cggtcaggct ttccggtatg taagcggcta
     1861 gattctttag gggatttaac gttgcctggg gcgtttcatc aggtttggcc aggggtgaga
     1921 cgggttgttg caggccggcc accatctcct ggagcttccc actccatgcc ttgccgggct
     1981 cgaaggtgtt catgatggtc aaaccgagcg ccagcgccac cgagacgtta acaaggcaga
     2041 tcaagagcag tctttaccgt ggcgagcagt gatatcggtg cggataaatg catccaagta
     2101 ggcc
//
LOCUS       DASQSL010001907         1517 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_200793, whole genome shotgun sequence.
ACCESSION   DASQSL010001907 DASQSL010000000
VERSION     DASQSL010001907.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1517
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200793"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1329)
                     /locus_tag="VE844_19225"
     CDS             complement(<1..1329)
                     /locus_tag="VE844_19225"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03401.1"
                     /translation="MLALSYLYHMLATFRPLFSRHTPWVLFCVVILGFIGTPHLEGLT
                     SLCRFWFMEEADYHRLLHFFHSCAWSLDDLVRHWSHLVLSQQVAVTVEGRAVLLGDHT
                     AVVKDARRMPGVVTLHQDSETQSKPTYYRGHYWGVVGLLVGSLREAFCLPLEARLHQG
                     LAHLGASKSSPTDRDTQGVMLVQMALDFARRHDRLSIVVLDAFFSIGAVFELANSVCS
                     IAFKQPYLTILTRAKKSYVAYLEPLAPRPKPRGRPKTYGDKIKLKTVFATYQEQFLQA
                     ECQLYGHVEIISYLALNLLWKPIKGPVRFIFAITSRRPLILMCRDLTLAPLLALELYG
                     ARVRVETLVAMLKGVLGAFAYRFWSKYVPRHSPKPKKNADLKRPQSQHVPAVQQTWLA
                     CERFVMLGCLALGMLQLIALNFHGSIWDSFTAYLRTRSRALPSERTVKEVL"
BASE COUNT          368 a          388 c          477 g          284 t
ORIGIN      
        1 caagacctcc ttgaccgttc gctcagacgg cagggcccgg ctacgggtgc gaaggtaggc
       61 ggtaaaggag tcccaaatcg agccatgaaa gttcagcgct atgagctgga gcatgcccaa
      121 cgccaggcag ccaagcatga cgaagcgttc acacgccagc caggtctgct gcaccgctgg
      181 cacatgctgg ctctggggac gcttgaggtc ggcgttcttt ttgggcttgg gtgagtggcg
      241 tggcacgtac ttggaccaga agcgataggc gaaagccccc aggacgccct tgagcatcgc
      301 aaccagggtt tcgacccgga ctcgggcacc atagagttcg agggccagaa ggggcgccag
      361 ggtcagatca cgacacatca ggataagagg gcggcgcgag gtgatggcaa aaataaagcg
      421 caccggtccc ttgatcggct tccacagcag gttgagagcc agatacgaga ttatctccac
      481 gtggccatag agctggcact ccgcctggag aaactgctct tgataggttg caaagacggt
      541 cttgagttta attttatcgc catatgtttt ggggcgtcca cgcggttttg gccttggcgc
      601 gaggggctcg agataggcca cgtagctctt tttggctcgg gttaagatgg tgagataggg
      661 ttgcttgaaa gcgatggagc aaacggagtt ggccagctca aagacggccc cgatggagaa
      721 aaaggcatct aagacgacaa tcgagaggcg gtcatggcgc cgggcaaagt ccagggccat
      781 ctgcacgagc atgacgcctt gagtatcgcg gtcggtggga ctcgacttgc tggcacctag
      841 gtgagccaaa ccctggtgca gacgggcctc aagaggcagg caaaaggcct cgcgcagcga
      901 gcccaccagt aagcccacga cgccccagta atggccccgg tagtaggtgg gtttactctg
      961 ggtttcactg tcttgatgta aggtgacgac acccggcatg cgccgggcat ccttgacgac
     1021 ggcggtatga tcacctagca ggacggcccg gccttcgacg gtcacggcga cctgttgact
     1081 caagacgaga tgactccagt ggcgcacgag gtcatccagg gaccaggcac aggagtggaa
     1141 aaagtgtaag aggcggtgat agtcggcctc ctccatgaac cagaatcggc acaacgaggt
     1201 gaggccctcc aggtgagggg tgccgatgaa gccgagaatg acgacacaga acaagaccca
     1261 gggcgtatgt cgcgaaaaaa gagggcgaaa ggtagcgagc atgtggtaaa gatagctcag
     1321 agcaagcatg cgattcccct tattgtatta agtgctaagg gaaattttat cgcatgcttg
     1381 ctcgacttta ctcgtcactg cgatacgctc agattatgcc tcgacgtccc ctgacagctg
     1441 ggagaactta tgactcagga gaacagagtc tgtttatata aaaacgtaga cggtacctgg
     1501 acgtatgacc acactct
//
LOCUS       DASQSL010001908         1928 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_150497, whole genome shotgun sequence.
ACCESSION   DASQSL010001908 DASQSL010000000
VERSION     DASQSL010001908.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1928
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150497"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            187..558
                     /locus_tag="VE844_19230"
     CDS             187..558
                     /locus_tag="VE844_19230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03402.1"
                     /translation="MMPEPMDQVDLSPSRKINLELRLTQYYLPPLDNALIIGRRAAIG
                     ANSVSRAFEELSPGTFRLIPVEHHVAEAVLVRASDLRKLPEAELIRRLLLQADQIMDE
                     TDTLHVKLHFEIIIGEGDIRI"
     gene            565..1572
                     /locus_tag="VE844_19235"
     CDS             565..1572
                     /locus_tag="VE844_19235"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phosphoacceptor
                     domain -containing protein"
                     /protein_id="HZC03403.1"
                     /translation="MNMEKRVRDFLEPIVVCAELSTLEQVLGTLKQGKPVAIRWPAWQ
                     LLLPGHVVGYPLSRRIIDLPLTKPPIISPDLSVQEALIKLRDEDIPYALVDNGAALLG
                     VISVNRLRKYAENEERDRALEAIKIALREKELFFREAHHRIKNNLQIIASLLSLQASY
                     IPDPLIREMFMDSQDRVRSMALIHEALSQSGDTGEIDFAAYIRELASQLMHIYHGESE
                     RIRLQLHLDDLLLDVNKATPCGLVLNELLCNALKHAFPTGRSGEIRIDLKVDAAQQVT
                     LVVSDTGIGLPTELDFLNAETLGLQLISTLTEQLNGTLTLDRDNGTVFTLTFSGGITT
                     G"
     gene            1715..>1928
                     /locus_tag="VE844_19240"
     CDS             1715..>1928
                     /locus_tag="VE844_19240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase"
                     /protein_id="HZC03404.1"
                     /translation="MKRLSRDKYTTVQDPTLAPAITIASGEELLVETWDAYMGVWGAN
                     EQPSVMGPATGPIAVEGAKPGDALKVD"
BASE COUNT          423 a          517 c          570 g          418 t
ORIGIN      
        1 aagaggccct tgccgcctgc tctgggcgta tcaaagttaa tacggggcct tcctgccggg
       61 ggcgatgggg actgtcgtta ggcgttcgcc tgcaggtgtc gcaaggcagg agtggcaaac
      121 gacccatgca cggcataact ggtcgagtta gcaaataggt catgtgatac tctcaacgag
      181 gcctgcatga tgccggaacc gatggatcag gtggatctct cgccatcgcg taaaatcaac
      241 ctcgaactcc gtctcaccca atactattta ccgccactgg ataacgcact gatcatcggc
      301 aggcgtgcgg caatcggggc caatagtgta agtcgagcct tcgaagagct gtcgcccggc
      361 acgttccgcc tcattccggt cgagcatcat gttgctgagg ccgtattggt cagggcctcc
      421 gatttgcgga aacttcccga agcggagctc atccgtcgct tgctcctaca ggcggatcag
      481 attatggacg aaaccgacac gctgcacgtc aagctccact ttgaaatcat catcggtgag
      541 ggagatataa ggatttgaac gtccatgaac atggagaagc gggtgcgcga ttttctcgag
      601 cctatcgtcg tgtgtgccga gctctcgacc ctagaacaag tgttgggcac cttgaagcaa
      661 ggaaagccgg ttgccatccg ttggccagca tggcagctgt tgcttcccgg gcatgtcgtc
      721 gggtacccac tcagccgccg tatcatcgac ctgcccctca cgaagccccc gattatatcc
      781 cctgatttgt ccgtccagga agccttgatc aagctccgcg atgaagatat cccttatgcc
      841 ctggtggaca acggggcggc cctgttgggt gtcatttcgg tgaaccggtt gcgtaagtat
      901 gcggagaatg aggagcgcga tcgggcgtta gaagcgatca aaatcgcgct ccgggaaaag
      961 gagttgttct ttcgagaggc gcaccaccgt atcaagaata atctccagat catcgccagc
     1021 ctgctcagct tacaggccag ctatattcca gacccgctta tccgcgagat gttcatggat
     1081 agtcaggatc gggtgcggtc gatggcgctg atccacgagg cgttgtctca gtcaggcgac
     1141 acgggggaga tcgacttcgc cgcatacatt cgcgagctgg cttcacaact catgcatatt
     1201 taccatggcg agtctgagcg catcagactg cagctacatc tcgatgacct cctcttggat
     1261 gtcaataaag ccacgccatg cggcttggtt ctcaatgagc tgctctgcaa tgcgttgaag
     1321 catgcttttc cgaccggtcg gagcggtgaa atccgcatag acctcaaggt ggacgcggca
     1381 caacaggtga cccttgtggt gtcggacacc ggtattggct tacccaccga gctggatttc
     1441 ctcaatgcgg aaaccttagg gttgcagctg atctccacgt tgactgaaca gctgaatggt
     1501 actcttacgc tcgatcgtga caatggaacg gtgtttacgc tgacctttag tggcggaatt
     1561 accacaggat aagccgcaac agtgtccacc gtgtgggtgg ggtgaggata ggtgctcgat
     1621 aacccgccgt gcggttgatg ctgatgcatg tgtcggcgtt cacgaccgtc ttgaccagga
     1681 atgctagaag gcatcgctga tcaggagaac cagcatgaag cgactcagcc gggacaaata
     1741 tacgacggta caggatccaa cgctcgcccc tgcgatcacc atcgcttcag gggaggaact
     1801 cttggttgag acctgggatg cctatatggg ggtgtggggg gccaatgagc agccatcggt
     1861 catggggcca gcgacgggac ccattgcggt ggagggggct aagcccggcg acgcgttgaa
     1921 ggtggata
//
LOCUS       DASQSL010001909         3047 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_53178, whole genome shotgun sequence.
ACCESSION   DASQSL010001909 DASQSL010000000
VERSION     DASQSL010001909.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3047
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53178"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..174
                     /locus_tag="VE844_19245"
     rRNA            <1..174
                     /locus_tag="VE844_19245"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            427..>3047
                     /locus_tag="VE844_19250"
     rRNA            427..>3047
                     /locus_tag="VE844_19250"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          711 a          775 c         1002 g          559 t
ORIGIN      
        1 cggtgaatac gttcccgggc cttgtacaca ccgcccgtca cgccatggaa gctgggggga
       61 cctgaagtcg gtgggctaac cgcaaggagg cagccgccaa aggtcaattc agtgactggg
      121 gcgaagtcgt aacaaggtag ccgtagggga acctgcggct ggatcacctc ctttctggag
      181 cgacgagtag gccagccctt ctgggttggt gtgaaagtcc tcagaagtcg cccgcactct
      241 attactttct agctcgcatc actttcatct tatcggctcc tgcgggggcc gatctgctct
      301 ttgacaactg agggatggat ggttgtagtc tgcttccgct gcaaggcggg cgcagacggg
      361 tgtgaggaat caacaccggt tgcatggtct gcatcgcgtg ggaccaggca acacgaacga
      421 atttgagatc aaacgcaata aggcacacgg tggatgcctt ggcatcgaga ggcgatgaag
      481 gtcgtgataa gctgcgataa gcctggggga gctgcacatg agccgtgatc ccaggatgac
      541 cgaatgggga aacccggccg atcgcgagat cggtcaccgc gcaagcggag ccaacccggg
      601 gaactgaaac atctcagtac ctggaggaac agaaatcaac cgagattctc ctagtagcgg
      661 tgagcgaacg gggaagaggc caaaccgcgg gggcatgccc ccgcggggtt gtgggaccac
      721 aacgtgggat gcacgacgcc agagtgaagc ggcctggaac ggcccgccag agacggtgac
      781 agcccggtaa ctgtacgcgt acggccccta gtggtatccc gagtagcgcg gagcacgtgg
      841 aattctgcgc gaatctgggg ggaccaccct ccaagcctaa atactcctcg atgaccgata
      901 gtgcactagt accgtgaggg aaaggtgaaa agcacgccag gtggcgagtg aaagagatcc
      961 tgaaaccgtg tgccgacaag cggtaggagg gttgtcttcg gacagcctga ctgcgtgcct
     1021 tttgcattat gatccggcga gttactgctc acgtgcaggt taaggccttc agggccggag
     1081 ccagagcgaa agcgagtctg ataagggcga ttcgtacgtg gtcgtagacc cgaagccgtg
     1141 gcgatctacc cttgagcagg ttgaagccgc cgtaacaggc ggtggaggac cgaacccatg
     1201 tgggttgaaa accgctggga tgacttgagg gtaggggtga aaggccaatc aagctcggag
     1261 atagctggtt ctccccgaaa tatattttgg tatagccttg ggaaatgagt tcgcaggagg
     1321 tagagcactg gatgggtccg ggtcgtgaat aacgatacct cccccaacca aactccgaat
     1381 gcctgtcgaa tgctgcccgg gaggcagtcg cggtgcgcta atgtaccgtg gcgagaggga
     1441 aagaacccag agcctcagct aaggccccgg agtggcggct cagtgtagca aaggatgtga
     1501 tcttgctgtg acaactggga ggttggctta gaagcagcca ttcctttaaa gagtgcgtaa
     1561 tagctcacca gtccagcgta gccgcgccga taatggtcgg gacttcaagc cgcccgccga
     1621 agctaggtct tcatgcgcaa gcatgagggg taggggagcg ttcccacagc agtgaagccg
     1681 gggcggaagc cttccggtgg agcggtggga agtgaggatg ccggattaag tacgcgagaa
     1741 acagggtgaa aacccctgtc accgtaagcc taagggttcc tgagccatgt cgatcagctc
     1801 agggtcagtc ggtccctaag tcgaggccga gaggcgtaga cgatgggaaa cgggtcaaca
     1861 ttcccgtacc aactgtaggc cgttacgagt ctgaggaggg acacaggagc aaggtcaccg
     1921 gcgggtggtg gattttccgc tgcaaggtgg tagacgtttc ccggtaggca aatccgctgg
     1981 gatagtcgag aaccgatgcc gaaggggccg tatggccccg ccaagggtgg ctgccgcaca
     2041 ctgtcgagaa aagcttcgca gaccaggact gcagttgacc gtaccgtaat ccgacacagg
     2101 tgggcgaggc gagaagccta aggtgctcga gtgatttacg gaaaaggaac tcggcaaaat
     2161 taccccgtaa cttcgggata aggggtgccg gcagtatgtg acccgccaag gggagcagag
     2221 accggccgca gagaatcgtc ccaagcgact gtttagcaaa aacacaggag cgtgccaagg
     2281 cattgtccaa gccgacgtat acgctctgac tcctgcccgg tgccggaagg ttaaggcaag
     2341 cggttagccg caaggcgaag ctgcgaaccg aagccccggt aaacggcggc cgtaactata
     2401 acggtcctaa ggtagcgaaa ttccttgtcg ggtaagttcc gacctgcacg aatggagtaa
     2461 cgacttggga gctgtctctt ccgtaagctc ggcgaaatag cagtatcggt gaggattccg
     2521 attacccgcg acaggacaaa aagaccccgt gcacctttac tacaacctgt cattgaacgt
     2581 cggtatgacc tgcgtagcat aggtgggagc cgttgaggcg ccggtttcgg ctggcgcgga
     2641 ggcaacagtg aaataccacc cttgttttac taacgttctc actcaggcgg taaccccgcc
     2701 gaggaccgtg gctggtgggt agtttgactg gggcggtcgc ctcctaaaga gtaccggagg
     2761 cgcgctatgg tgggctcagt gcggtcggta atcgcacgat gagtgtataa gcagaagccc
     2821 gcctgactgc gagcgcgacg gcgcgagcag ggacgaaagt cggcttaagt gatccggtga
     2881 tcccgtgtgg atgggtcatc gctcatcgga taaaaggtac gctggggata acaggcttat
     2941 cgcgcccgag agttcacatc gacggcgcgg tttggcacct cgatgtcggc ttatcacatc
     3001 ctggggctgg agaaggtccc aagggtccgg ctgttcgccg gttaaag
//
LOCUS       DASQSL010001910         1269 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_108140, whole genome shotgun sequence.
ACCESSION   DASQSL010001910 DASQSL010000000
VERSION     DASQSL010001910.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1269
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108140"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            288..563
                     /locus_tag="VE844_19255"
     CDS             288..563
                     /locus_tag="VE844_19255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007752652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HZC03405.1"
                     /translation="MIRSFRHKGLMELFMTGKSAKVRASLQSRCLTRLDTLNQAGRPK
                     DMHLPGFNFHALRGKPKRYSVHVNGPWCITFEFEKGDAWRVDLEQYH"
     gene            574..888
                     /locus_tag="VE844_19260"
     CDS             574..888
                     /locus_tag="VE844_19260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014027871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antitoxin"
                     /protein_id="HZC03406.1"
                     /translation="MKEYLVTDRPARCPVHPGVLLRDEVLPALGLSVSEAARQLRVSR
                     QTLHRIMGATHAISPEMAVRLGKFCGNGPDLWLRMQAAYDLWHAEQSLREELEFIPTR
                     AA"
     gene            900..>1269
                     /locus_tag="VE844_19265"
     CDS             900..>1269
                     /locus_tag="VE844_19265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03407.1"
                     /translation="MRCAHEITATIIYRQDAEIVGWVERTRNPASSSVATLGRMLGFS
                     SFIPAYGPDGEERRHGRFALVDAGASGTDNLRKPCLPGSPAKVSALALIVERSVLPHQ
                     VDEQPDGEHTPDHTEGHGNPT"
BASE COUNT          280 a          359 c          374 g          256 t
ORIGIN      
        1 aatatgcatg gaatatgaaa tatggggtca ggaaatatgg ggtcagttct tgcattaacg
       61 catttggggc tttaaacttt acgccatggc cagacctctc cgcattgaat tttccggcgc
      121 aatttatcat gggacttctc gaggcaacgc tagcgcttag ggggtacgaa cgtagatgcg
      181 aacttcgggg cgcccttgca ctctgccctg cttgcaaaag cgcaaaaaac actctagagc
      241 tgtcgcagta aagtttacat atgtcaacaa cgtgttacag ttattacgtg ataaggagct
      301 tccggcataa gggcttaatg gagttattca tgacgggcaa aagcgccaag gtgcgtgcct
      361 ctctacaaag tcggtgcctg acccgcctgg acaccctgaa ccaggctgga agacccaaag
      421 acatgcactt gcccgggttc aattttcacg cgctgagagg caagccgaag cgctacagcg
      481 tccacgtcaa tggcccgtgg tgcattacct tcgagtttga gaagggtgac gcctggcgcg
      541 tcgatttaga gcaataccac taggggaaga accatgaagg aataccttgt tactgaccgt
      601 cctgcccggt gcccggtgca cccgggtgtt ctcctgcggg atgaggtgct gccggcactt
      661 ggactctctg tctcggaggc ggcacgtcag cttcgggtca gccgccagac cttgcaccga
      721 atcatggggg cgactcacgc catctccccg gagatggccg tgcgcctggg gaaattctgc
      781 ggcaacgggc cagacctgtg gctgcggatg caggcggcct atgacctatg gcacgccgaa
      841 cagagcctac gcgaggaact tgagttcatc ccgacccgcg cggcgtaagc aagcgtagcg
      901 tgcgctgtgc gcacgaaata acggctacaa tcatctaccg gcaagatgca gagatcgtag
      961 gctgggttga gcggacgcga aacccagcat cttcatcggt tgccacgttg gggaggatgc
     1021 tgggattctc ttcgttcatc ccagcctacg gccctgatgg cgaagagcgc cggcacggac
     1081 gtttcgctct agtcgatgcg ggcgcatccg gaaccgacaa cctgcgtaag ccgtgccttc
     1141 ccggatcgcc ggcgaaggtc tcggctttgg ccctgatcgt cgagcgttca gtgctgccgc
     1201 accaagtcga tgagcagccc gacggtgagc acacccccga tcacaccgaa ggtcacggga
     1261 acccaaccg
//
LOCUS       DASQSL010001911         1110 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_173200, whole genome shotgun sequence.
ACCESSION   DASQSL010001911 DASQSL010000000
VERSION     DASQSL010001911.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173200"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(135..>1110)
                     /locus_tag="VE844_19270"
     CDS             complement(135..>1110)
                     /locus_tag="VE844_19270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013535369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HZC03408.1"
                     /translation="NMVANILQAAAWKGPFLEAGKEIIITALPLYHIFALTLNCLTFM
                     KLGGLNYLITNPRDLKGFVNALGKIRFSCITGVNTLFNLLLHAPGFADLDFSSLKITV
                     GGGMAVQPAVAARWKAVTKNTLIEGYGLTETSPLACVNPFDIGEYTGSVGLPVSSTEC
                     VIENDEGERLPFGETGELCIRGPQVMKGYWNRPEETAKVLTAEGWLHTGDLAQMDEHG
                     FIKIVDRKKDLIKVSGFSVYPNEIESILAGHPGVQEVAAVGISDAKSGEAVKLFVVKK
                     DPKLTAEELRRYCVDNLTAYKIPKYIEFRDALPKSNVGKILRRELREP"
BASE COUNT          253 a          327 c          285 g          245 t
ORIGIN      
        1 acgtgcgagt gcacccactg gccctgggtg tcacgcaata cccctcacgg atcagtaccc
       61 ggtagcggat cggccatgcc agggcgctca gtccctgggc ttcgaaacag tgctcttgtc
      121 cccaatgtaa tcacctaagg ctcgcgtagc tcccgccgca ggatcttacc tacattcgat
      181 tttggcaagg catcgcggaa ctcgatgtat ttcggtatct tgtaagccgt aagattatcg
      241 acgcagtacc gacgtaattc ctcagcggtg agcttagggt cctttttcac cacgaagagt
      301 ttaacggcct cacccgactt ggcgtcagag atacctacgg cagccacctc ctgtacaccg
      361 ggatgccctg caagtatgct ttctatctcg ttaggataga cgctgaagcc ggataccttg
      421 atcaggtcct tcttgcgatc gacaatcttg ataaaaccgt gttcgtccat ctgggcaaga
      481 tcaccggtgt gcaaccaacc ctccgctgta agtaccttgg cggtctcctc cggacggttc
      541 cagtaaccct tcatcacctg aggcccccgg atacagagct cgcccgtctc cccgaaggga
      601 agacgctcgc cttcgtcatt ttcgataacg cattccgtgg aagacacggg caaaccgacc
      661 gagcccgtgt actccccgat gtcgaaggga ttgacgcagg ccagcggtga ggtctccgta
      721 agcccatagc cttctatcaa ggtgtttttg gtcaccgcct tccagcgtgc ggcgaccgcg
      781 ggctgcaccg ccatacctcc acccacggtg atctttaggc tggaaaaatc cagatcggcg
      841 aatccgggag catggaggag taagttgaac agcgtgttca ccccggtgat gcagctaaac
      901 cggatcttac caagcgcatt gacgaagcct ttaagatcac gcggattggt gatgagataa
      961 ttcaagcctc cgagcttcat aaaggtcaaa caattgaggg tcaaagcgaa gatatgatag
     1021 agcggcaagg cggtgataat gatctccttg cccgcctcaa gaaacggccc cttccaagcg
     1081 gccgcctgaa gtatattggc caccatattt
//
LOCUS       DASQSL010001912         1400 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_53206, whole genome shotgun sequence.
ACCESSION   DASQSL010001912 DASQSL010000000
VERSION     DASQSL010001912.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1400
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53206"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(91..1203)
                     /locus_tag="VE844_19275"
     CDS             complement(91..1203)
                     /locus_tag="VE844_19275"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC03409.1"
                     /translation="MPHCTLLDIAREEQAQMLAALRRARYGYLLALHVLLLCAAGRTP
                     SEIAAYLFCSRSSVYRTVRAYRTGTLAFTFNEEGQVRPPIRTTVLLPTLRRSLLALLK
                     TVPQTYGWCRTRWSCATLALTLQAKRGLTVSAETLRRWLHEVGWVWKRAKLAAKDDDP
                     HRIERLARIRFVFEHLQAGEAMIFADELDISLLPKVGAAWMPKGTQLAVMTPGTNTKY
                     YLAGALDVATGILLHCCGPRKTNALFRDLLQVIEEHYPTELYTRLYVVVDNYKIHKAK
                     AVQQWLVDHPRVALLFLPTYCPRANPIERAFGDVHDCCTRNHRRKCLSDLVADVETHL
                     HVNGPWLYKLSQLYYEPAITAAVEKIAAEEPGKVAA"
BASE COUNT          297 a          404 c          418 g          281 t
ORIGIN      
        1 ccccgaacgt gacgatcacg actaaacatc cctgctggtt cttctggtac ccctctcagg
       61 gctaaatcag tccacatgag attggtacac tcacgcagca acctttccag gttcctctgc
      121 ggcaattttt tcgaccgccg cggtgatcgc tggctcatag tagagctggg acagcttgta
      181 tagccagggg ccattgacgt ggagatgcgt ttccacatca gctaccaagt ccgataagca
      241 tttgcgccgg tgattgcggg tacagcagtc atgcacatcg ccaaaggcgc gctcgatcgg
      301 gttggcgcgc ggacagtagg tgggcaaaaa gagcagagcc acccgcgggt ggtcgaccag
      361 ccattgctga accgccttcg ctttatggat tttatagtta tccacgacga catagagccg
      421 cgtatacagc tcggtgggat agtgctcctc gatgacctgg agcaggtccc gaaacagggc
      481 attggttttc cgcggcccgc agcagtggag cagtatgcca gtcgccacat ccagcgctcc
      541 ggccaggtaa tatttggtat ttgtccccgg ggtcatcacg gctagctgag tgcctttagg
      601 catccaggcc gcgcccacct tgggcaacag cgagatatcg agttcgtcgg caaagatcat
      661 ggcctcgccc gcttgcagat gctcaaacac gaatcggatg cgggctaagc gctcgatgcg
      721 gtgcggatcg tcgtctttgg ccgccagctt ggcccgcttc cacacccagc cgacctcatg
      781 aagccagcgc cgcagcgtct cggccgagac tgtgaggccc cgtttggcct gcagggtcag
      841 ggccagcgtg gcgcaactcc agcgcgtgcg acaccagcca taggtctgcg ggacggtctt
      901 gagcaacgcc agtagtgacc gccgcagcgt ggggagcagc acggtggtgc ggattggggg
      961 ccgcacttga ccctcctcgt tgaaggtgaa tgcgagcgtg cccgtgcggt aggcgcgcac
     1021 agtgcggtac acactggagc gggagcagaa caggtaggcc gcaatctccg acggggtgcg
     1081 gccggccgca cacaacagca atacatgcag ggccagcaga taaccgtacc gggcacgccg
     1141 gagtgcggcc agcatctggg cctgctcctc ccgggcaatg tcgagcaggg tgcagtgcgg
     1201 catagcgagg gctcctcgat acacggatgt gtggcaagat cctatgtatc ataaggagac
     1261 cctcgctgtg ccaatctcat gtggttcgat ttagtaggaa agtggactaa gaattaaact
     1321 tcgcttcatt tgaatattta aactttcatt ccgcactaaa taaaccataa tgtccgcttg
     1381 cttcgacaga gacaccaatt
//
LOCUS       DASQSL010001913         1726 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_93772, whole genome shotgun sequence.
ACCESSION   DASQSL010001913 DASQSL010000000
VERSION     DASQSL010001913.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1726
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93772"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1246
                     /locus_tag="VE844_19280"
     CDS             <1..1246
                     /locus_tag="VE844_19280"
                     /EC_number="6.2.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011330843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030729 - acetoacetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019287 - isopentenyl diphosphate
                     biosynthetic process, mevalonate pathway [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acetoacetate--CoA ligase"
                     /protein_id="HZC03410.1"
                     /translation="PGGICYADFLGQKPNPVIEFEHLPFTHPVYILYSSGTTGPPKCI
                     VHGAGGTLIQHLKELVLHTDLTPQDTIFYYTTCGWMMWNWLVSSLATGATVVLYDGSP
                     SFPHPGALFDLAQSEGISIFGASAKYFSALEKAGIKPAATHDLTGLKAILSTGSPLAP
                     QSFDYIYRDIKADVQLSSISGGTDLISCFALGNPILPVYRGELQCRGLGMKVEIYDPQ
                     GRSVRGQKGELVCTAPFPSMPVGFWNDPHQEKYRRAYFERFPGIWAHGDYAELTEHEG
                     MIIYGRSDAVLNPGGVRIGTAEIYRPVEGLPEILESLAVGQEWNNDVRIVLFVKLREG
                     ITLDTALIERIKRTIRDHASPRHVPAKVIAVPDIPRTLSGKIVELAVHNIIHHRPVKN
                     LDALANPEALEFFKDLAELRTP"
     gene            complement(1205..1513)
                     /locus_tag="VE844_19285"
     CDS             complement(1205..1513)
                     /locus_tag="VE844_19285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03411.1"
                     /translation="MHFLDEHHKHEHCFTLYSPADLNDPAKVQQLFDFFGLRLKHQEI
                     ILAGRKNRNPHCLTVLTSEDEREFEAVLANLPTKYLQIFTRHPYTSRGSQLSQILKEL
                     "
BASE COUNT          353 a          493 c          463 g          417 t
ORIGIN      
        1 cccaggtggg atctgctatg ccgattttct gggacagaag ccaaaccctg tcattgaatt
       61 tgagcatcta cccttcactc atcccgtcta tatcctttat tcctcgggca ccaccggccc
      121 ccccaaatgc attgtccatg gtgccggtgg gacgcttatt cagcatctga aggaattggt
      181 gctgcacacg gatcttacgc ctcaggatac gatcttctat tacaccacct gcggctggat
      241 gatgtggaac tggttggtct ctagcctcgc caccggggcc accgtggtgc tttatgacgg
      301 ctcgccgtct ttcccgcacc cgggcgcgct cttcgacctc gcccaaagcg aggggatctc
      361 gatcttcggc gccagtgcca agtatttttc cgcccttgag aaggcgggga tcaagcccgc
      421 cgctacccat gatctcacag ggcttaaggc gatcctctcg accggctcgc cgctcgcacc
      481 ccaatccttc gattatatct atcgggacat taaagccgat gttcagctct cctcgatctc
      541 gggcggtacc gatctcatct cctgtttcgc gctcggcaac ccgatcctcc cggtctatcg
      601 gggcgagctg cagtgccggg ggcttgggat gaaggtggag atctacgacc cgcagggtag
      661 atccgttcga ggacaaaagg gggaactggt ctgtacggca cctttcccgt ccatgcctgt
      721 cggcttttgg aacgaccccc atcaagaaaa atatcgccgg gcctatttcg agcgctttcc
      781 tgggatttgg gcccatggcg actatgccga gctcaccgag catgagggta tgatcatcta
      841 tggccgctcc gatgccgtgc tcaatcccgg cggcgtgcgc atcggcacag ccgagatcta
      901 ccggcccgtg gaagggttgc ccgagatcct cgagagcctg gctgtgggtc aggagtggaa
      961 caacgatgtg cggatcgtct tgttcgtaaa actgcgagaa ggtatcacct tggacaccgc
     1021 cttgatcgag cggatcaagc gaactattcg ggatcatgcc tcaccccgtc atgtgcctgc
     1081 caaggtgatc gctgtcccgg atattccccg cactctgagt ggcaagatcg ttgaacttgc
     1141 agtccacaat atcattcacc atcgtcccgt caaaaatctc gatgccctgg cgaaccctga
     1201 ggccttagag ttctttaagg atctggctga gctgcgaacc ccttgaggta taaggatggc
     1261 gggtaaatat ctgcagatat tttgtgggca gatttgctaa caccgcttca aactccctct
     1321 catcctcgga agtgaggaca gtcaggcagt gcggattcct gtttttccgg cctgccaaga
     1381 tgatctcctg gtgcttgagc ctaaggccaa aaaagtcaaa cagctgttgg acctttgctg
     1441 gatcattgag gtcagcgggg gaatataggg taaaacagtg ttcgtgcttg tggtgttcat
     1501 cgagaaaatg catggcccga ttctcgatct ctatccattc actaggctag gaattacgca
     1561 ttgattgtga cagatgaacc ggtgtccacg ccgcccctgg cagacgcacc atcggggttt
     1621 gcacttccag ttcggtcgtc attcggcatc gggatagcct ccttatggac agttaacggc
     1681 ccagatttta ccgaactgct tccgagctga atgaaaatta tttggt
//
LOCUS       DASQSL010001914         2588 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_150546, whole genome shotgun sequence.
ACCESSION   DASQSL010001914 DASQSL010000000
VERSION     DASQSL010001914.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2588
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150546"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..767)
                     /locus_tag="VE844_19290"
     CDS             complement(<1..767)
                     /locus_tag="VE844_19290"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012971600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HZC03412.1"
                     /translation="MPLLSLIIWLPIAGGVWVLYKGAQGDEQAIRKHALGITTATFIL
                     SLLLYLGFDATTHTMQFEERLPWITAFDIQYHLGIDGISLPLILLTTFTSVLVILQGW
                     EVIALRTAQYLAAFLILEGLMNGVFAALDAILFYVFWEAMLIPMFLIIGVWGGERRVY
                     ATIKFFLYTFLGSVFMLVALLYLYAQAGSFSILAMHEVPLGSTAQIMIFIAFLLAFAV
                     KVPMWPVHTWLPDAHVEAPTGGSVILAAILLKMGGYG"
     gene            complement(791..>2588)
                     /gene="nuoL"
                     /locus_tag="VE844_19295"
     CDS             complement(791..>2588)
                     /gene="nuoL"
                     /locus_tag="VE844_19295"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012637569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HZC03413.1"
                     /translation="HIVVNGAPPFNGTIYTWLSSAGLDLHIGFLIDKLSVTMMVVVTF
                     VSWMIHIYTIGYMHDDAGYQRFFSYISFFTFGMLMLVMANNFLQLFFGWEAVGLASYL
                     LIGFWFKRESAIQASLKAFLVNRVGDFGFLLGIAAIYMYFDTLNYAPVFERAHLVANQ
                     TVQVIPGLDWSVMSLICILLFIGAMGKSAQVPLHVWLPDSMEGPTPISALIHAATMVT
                     AGIFMVARMSPLYELSETALSLVLVIGALTAFFMGLLGLVQHDIKRVIAYSTLSQLGY
                     MTVALGASAYAAGIFHLVTHAFFKALLFLAAGSVIIALHHEQDMRKMGGLYKYMPITW
                     ITSLIGSLALIGFPGMSGFFSKDAIIEAVHHSELPGAGLAYAAVLSGVFVTALYSFRL
                     FFMVFHGRERMDHHTQEHLHESPRVVTVPLIMLAIPSVIIGAIYVGPMLFQGYFAEAI
                     PVRPEHDVLSEIGRDYHGWWSFMLHGLGSAPFMLAMLGVATAWVCYIHRPELPAMAVD
                     RFKQIYTLLINKYGFDDFNDRVFAGGARSTGQMLWQVGDVTVIDGLLVNGSARAVGWF
                     SGIARQLQSGYLYHYAFAMIIGLLAFIALFVY"
BASE COUNT          696 a          723 c          718 g          451 t
ORIGIN      
        1 aacccatagc cgcccatctt gagcagaatg gccgcgagta tcaccgaccc cccggtgggg
       61 gcctccacgt gggcgtcggg gagccaggta tggaccggcc acatcggcac cttgacggca
      121 aaggccaaga gaaaggcgat aaagatcatg atctgcgctg tgctgccgag cggcacctca
      181 tgcatggcca ggatagagaa actcccggcc tgagcataga gatacaacaa ggccacgagc
      241 ataaataccg agcccaggaa ggtatacaga aagaatttga tggtggcata cacacgccgc
      301 tcgccccccc acacaccgat gataagaaac atcgggatca gcatcgcttc ccagaacaca
      361 tagaacagga tcgcatcgag cgctgcaaac acaccgttca tcagcccctc gaggatgaga
      421 aaggccgcca ggtattgcgc ggttctgagc gctatcacct cccagccctg gagaatgacc
      481 agcacgctag tgaaggtcgt gagcaggatc agcggcaggg agatcccatc gataccgaga
      541 tgatactgga tgtcaaaggc cgttatccaa ggcagccgtt cctcaaactg catcgtgtgg
      601 gtggtggcat caaacccgag atataacagt agagagagga taaaggtggc agtcgtgatc
      661 cccagggcat gctttctgat tgcctgttca tccccttgag cacctttata gagcacccat
      721 acaccgcctg ctatgggtag ccagataatg agactgagca gtggcatgtt tgatgagagt
      781 tggttatctt tcagtataca aatagcgcaa taaacgccag caagccgatg atcatggcaa
      841 aggcgtaatg atacagatag cccgattgca gctgccgggc aatgcccgag aaccagccca
      901 cggctcgggc cgagccattg accaaaagcc cgtcgatcac ggtgacatca cccacctgcc
      961 agagcatctg gccggtgctc cgcgccccgc cggcaaagac ccggtcgttg aaatcatcga
     1021 aaccgtattt gttgatgagc agcgtataga tctgcttgaa tcgatccact gccatggccg
     1081 gaagctcagg gcggtggata taacacaccc aggcagtcgc cacgcccagc atcgccaaca
     1141 taaaaggcgc cgatcccaaa ccgtgcagca taaagctcca ccagccgtga tagtctcgac
     1201 ctatctcgct caacacatcg tgctcgggcc gcaccgggat cgcttcggca aaataaccct
     1261 ggaacagcat cggtccgaca tagatagcac cgatgatgac cgaggggatg gcgagcataa
     1321 tgagcggcac cgtcaccact ctgggagatt catgcagatg ctcctgggtg tggtgatcca
     1381 tgcgctctcg accatggaac accatgaaga acaagcgaaa actataaagg gcggtcacga
     1441 acaccccgct cagcacagca gcataggcca acccggcgcc tggcaattct gaatgatgca
     1501 ccgcctcgat gatcgcatct ttggagaaga atccggacat cccggggaat ccgatcaagg
     1561 cgagtgaacc gatgagcgag gtgatccagg tgatcggcat gtatttatag agcccgccca
     1621 tcttgcgcat atcttgttcg tggtgcaggg caatgatgac cgatcctgcc gcgagaaaca
     1681 gcagggcctt gaagaaggca tgggtaacga gatgaaagat ccccgccgca taggcggatg
     1741 cccccagagc aaccgtcata tagcccagtt gggagagggt cgagtaggcg atgacccgtt
     1801 tgatgtcatg ttgcacaagg cccaaaagcc ccatgaaaaa ggccgtcaat gcgccgatca
     1861 ccagtactaa gctcaaggcg gtctccgaga gctcatagag tggcgacata cgcgcgacca
     1921 taaagatccc cgcggtcacc atggtcgctg catggatgag cgcggagatg ggtgtgggac
     1981 cttccatgga atcaggcaac cagacatgca agggtacttg cgccgatttc cccatggcgc
     2041 cgataaagag caggatacag atgaggctca ttaccgacca gtcaagcccc ggaatcactt
     2101 ggacggtctg attggcaacc aggtgtgccc gctcgaatac cggcgcatag ttcagggtat
     2161 cgaaatacat atagatcgcg gcgatgccga gcaaaaaccc aaaatcaccg acccggttga
     2221 cgagaaaggc tttgaggctc gcctggatcg ccgattcccg cttgaaccag aagccgatca
     2281 agagatagga cgccagcccc acggcctccc agccgaagaa gagctgcagg aagttattgg
     2341 ccatgaccag catcagcatc ccgaaggtga agaacgagat atagctgaaa aagcgctgat
     2401 agcccgcgtc atcgtgcatg taaccgatgg tgtagatatg gatcatccag gatacaaacg
     2461 taaccaccac catcatggtt accgacagct tatcgatgag aaaaccgata tgcaggtcga
     2521 gaccggcgct gctcaaccag gtgtagatag tgccgttaaa cggtggggcg ccgttgacga
     2581 cgatatgc
//
LOCUS       DASQSL010001915         1009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_108181, whole genome shotgun sequence.
ACCESSION   DASQSL010001915 DASQSL010000000
VERSION     DASQSL010001915.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108181"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(273..566)
                     /locus_tag="VE844_19300"
     CDS             complement(273..566)
                     /locus_tag="VE844_19300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004512326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HZC03414.1"
                     /translation="MNKAELVSAMAKEAGITKGQAESALNCMQTSVVDAIRKGEKVTL
                     VGFGTFSSVQRKARTGRNPQTGSEIKIPAKRVPKFAPGVSLRDAASKGRARKK"
     gene            complement(720..>1009)
                     /locus_tag="VE844_19305"
     CDS             complement(720..>1009)
                     /locus_tag="VE844_19305"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009261496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HZC03415.1"
                     /translation="DLSVPTGTPVQAAQEGIVVFAGYNGAYGKAVKLEHQHGFSTLYA
                     HNSRVLVHVGQTVKAGQVICLSGSSGRSTGPHLHFEVHKDGWPVDPLQHLP"
BASE COUNT          190 a          297 c          303 g          219 t
ORIGIN      
        1 tccagagcgt aggcctgtag tggtgtcagc cggtcatggc agtctacagt cgataggagc
       61 tgtccatctg agataggcga aaccaggtaa ggagcaggag agaaacccct acggtgcgga
      121 aaaatgaggc gtactgctga ggtgcacccg tgctaggcga gcctccgtgt ggggcgttgc
      181 tggcgtaagg ctcgtcaggg cagggccgcc ccgtcatacg gtgtggggct cagccctgcc
      241 ctggtgtcac ctgcgcccac aggagccact cgtcacttct tgcgtgcccg ccctttcgac
      301 gccgcgtcgc gtagcgagac ccccggcgcg aatttgggaa cccgtttggc cgggattttg
      361 atttcggagc cggtctgcgg gttccgccct gttcgcgctt tgcgctgcac agaggagaac
      421 gttccaaagc ccacgagtgt gaccttctcc cccttgcgga tggcatcgac gacgctggtt
      481 tgcatgcagt tcagcgcact ctccgcctgc cctttggtga tgcccgcttc cttcgccatc
      541 gcggaaacaa gctcagcttt gttcataaat tcctccttat ttctggggtt tcgcgagggc
      601 atagcccctg aaccacagtg atcacgctca tttctacaca attattcgcg caatgtcaag
      661 agaaagtgcg gttcaggggt ttataggtgt cggcaaaggg cttaaatacg gcatccggct
      721 caggggaggt gttgcaaagg gtctactggc cacccgtcct tgtgcacctc gaaatgcaga
      781 tgcggacctg tcgagcgtcc gctgctgcca ctcaagcaga tcacttgacc ggccttcacc
      841 gtttggccga catggacgag aacccgtgag ttatgggcgt acagcgtcga gaagccatgt
      901 tgatgctcga gcttgacggc tttcccataa gccccgttgt acccggcaaa caccacaatc
      961 ccctcttggg cagcctggac aggcgtcccg gtggggacgc tgagatcga
//
LOCUS       DASQSL010001916         1475 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_118946, whole genome shotgun sequence.
ACCESSION   DASQSL010001916 DASQSL010000000
VERSION     DASQSL010001916.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1475)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1475)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1475
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118946"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..387
                     /locus_tag="VE844_19310"
     CDS             <1..387
                     /locus_tag="VE844_19310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03416.1"
                     /translation="VLESGLDSRSTHRLVGHLVRRHLAGGDLNRLTSDELAAVAEQVL
                     GQRIAISQAALDNALDPEAAVLARTAPGGAAPEAMDAMIAECERALAEADAWTSQHRR
                     RLRMAEDSLLRTAHECSRGSAASSPA"
     gene            529..786
                     /locus_tag="VE844_19315"
     CDS             529..786
                     /locus_tag="VE844_19315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014028940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HZC03417.1"
                     /translation="MPIVTLRSVGGSVVMAIPKRILDLVHLQPGSQVNIDVQNGNLIV
                     EPKKKPRYTLAELMAQCDLSQPMSTEEREWLDTPAVGAEEP"
     gene            786..1124
                     /locus_tag="VE844_19320"
     CDS             786..1124
                     /locus_tag="VE844_19320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014028602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HZC03418.1"
                     /translation="MRIPGRGEIWHVNLNPVAGKEQRGLRPVLVVSDKEFNRSGLMLI
                     CPVTQGGSQARFAGFAVSLMNTGTETQGVVMCNQPRTIDYAARAARFVEDVPDYVIDD
                     VLARLQTLLE"
     gene            1141..>1475
                     /locus_tag="VE844_19325"
     CDS             1141..>1475
                     /locus_tag="VE844_19325"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009205841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HZC03419.1"
                     /translation="MLDDKTIQSAVARLVAATTSPSQVILFGSYARGTADEGSDLDLL
                     VIEREILNKWDEYMRLRDALGRLAPGVGVDLLLAASARDIIDRWHLYQEHEYAHLRRK
                     FESGHFNHIG"
BASE COUNT          315 a          394 c          462 g          304 t
ORIGIN      
        1 gtgctggaga gcggtttaga ctcccgtagc acccatcgtc tggttggcca tctcgtgcgt
       61 cggcacctgg cgggtggtga cctcaatcga ctcacgtcgg atgagttagc agcggtggcg
      121 gagcaggttc taggtcaacg gatcgcgatc tcgcaggcgg ccctcgataa tgccctggat
      181 cctgaggccg ccgtcttggc acgcaccgca ccggggggcg cggcaccgga ggccatggat
      241 gcaatgatcg ccgaatgcga gcgggccctg gcagaggccg atgcgtggac cagccagcat
      301 cgccgtcggc tccgaatggc agaggactcg ctgttacgaa cggcccacga gtgctcgcgg
      361 ggatcggcgg cttcgagtcc ggcttgaggc atttaaaccg gaccgagcgt ttgcggtcga
      421 tgacacctct ttgcatcaga gagcatgagg gatggggagt cgagagtttc aaatccggtc
      481 tcaataagtt atactttagt gtaatttaag agatcgagag gtttcatcat gccgattgta
      541 actcttcgca gtgtgggcgg ttcggttgta atggctatcc ctaagcgcat actggatttg
      601 gtgcatttgc aacccggttc gcaagtgaat atcgatgtcc agaacgggaa tctgattgtt
      661 gagcccaaga aaaaaccacg ctacaccctc gccgagctga tggcgcagtg cgacctatcg
      721 cagcctatga gcaccgaaga aagggaatgg cttgatacac ctgccgtcgg cgcagaggaa
      781 ccctgatgcg catacccggc cggggcgaga tttggcacgt taatctgaac ccggtcgcgg
      841 gcaaggaaca gcgagggttg aggccggttc tggtggtgtc cgacaaagaa tttaaccggt
      901 ctggactgat gctaatttgt cccgtcacac agggcggcag tcaggcacgg tttgccggat
      961 ttgcagtatc gttgatgaac acaggcacgg aaacgcaagg agttgtgatg tgcaaccagc
     1021 cgagaaccat cgactatgcc gcacgcgcgg caaggttcgt agaggacgtg ccggattatg
     1081 tgatcgatga tgtcctggcc cggctgcaaa cccttttgga gtaaccgagt agaggttatc
     1141 atgctcgatg acaaaacaat ccagtccgcg gtggcccgcc tggtggctgc cacaacgtcc
     1201 cccagccagg tgatcctgtt cggctcttac gcacgaggca cggccgatga gggctcagac
     1261 ctcgatctgc tcgtcatcga gcgggaaata ctcaacaagt gggatgaata catgcgcctg
     1321 cgggatgccc ttggccggct ggcccctggt gtcggcgtcg acttgctgct cgcagccagc
     1381 gcccgtgaca ttatagaccg gtggcatctt tatcaggagc acgagtacgc tcacttgaga
     1441 cggaaattcg agtctggcca ctttaatcac atagg
//
LOCUS       DASQSL010001917         1865 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_150591, whole genome shotgun sequence.
ACCESSION   DASQSL010001917 DASQSL010000000
VERSION     DASQSL010001917.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1865)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1865)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1865
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150591"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..147
                     /locus_tag="VE844_19330"
     CDS             <1..147
                     /locus_tag="VE844_19330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018508822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TOBE domain-containing protein"
                     /protein_id="HZC03420.1"
                     /translation="FRGAEFLYTLGPPSGTTLLALVPSHHNHALKEPIGIRLEPGHLV
                     LFER"
     gene            340..1110
                     /locus_tag="VE844_19335"
     CDS             340..1110
                     /locus_tag="VE844_19335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HZC03421.1"
                     /translation="MDPKTAKVIVTGGASGLGFAVAQRFVGIGAQMAILDLNPTGGER
                     IASALGKDVFYLAVDVTSESSVDQAVQAVADQFGGVSLAVNCAGIVHSHRVVGRGDVG
                     LSQADFARVIAVNLIGTFTVCRAVAYVMQRNVPNAAGERGVIVNTASIAAYEGQIGLA
                     AYAASKGGVASLTLPLAREFASLGVRVMAIAPGLFATPMFAGLPDKVKARLAEDVPFP
                     RRLGDPKEFAELVCHIYQNPMLNGEVIRLDGALRMPPK"
     gene            1119..>1865
                     /locus_tag="VE844_19340"
     CDS             1119..>1865
                     /locus_tag="VE844_19340"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HZC03422.1"
                     /translation="MDCMLSEREQALLEQTVEFCCTEVDPASEHWEQHERLPREIFTK
                     AGERGLLGLTAPSEYGGQGISYRAYVLIIKELAKHYAALALDIAAHNALSLGHLLAFG
                     SEQQKQAYAARLIRGEWLGAWALTEPNAGSDSRGIETTATETESGWEITGHKTFITQG
                     RTADLLVVMASSGKTAAGKNEISAFLVLKDQVQPIRKIPTYGVRASETSELRFHRAQG
                     ELLGPRGRGQEQALAVLDHGRLGVAAVALGI"
BASE COUNT          384 a          513 c          569 g          399 t
ORIGIN      
        1 tttcgcggtg ctgaatttct ttacaccctg ggcccgccga gcgggacaac gttgctcgcc
       61 ttggtgccta gccatcacaa ccacgcccta aaagagccca tcgggatccg ccttgagcct
      121 ggtcatctgg tgttatttga aagataaaga gaaaataggg ggtcagatac ggttgcggcc
      181 tggcaaggct gcatcaccta gtgggttaga gttccactca agtaacggct ggccacgggc
      241 ttgttatcga gccttaaagc agaatgataa acattatctt agcgtaactt gccctatcgc
      301 aagaggtcta aataagaagg caagcgattt aacttaccta tggaccctaa aacagcaaag
      361 gtcatcgtta caggcggcgc ttccggttta ggatttgctg tcgcgcagag gtttgtcggg
      421 atcggtgctc aaatggctat tctcgatctt aatcccacag gcggtgaacg cattgccagt
      481 gccttgggga aagatgtgtt ttatcttgcc gtcgatgtga cctccgagtc gtccgtggac
      541 caggccgttc aagcagtggc cgatcaattc ggtggtgttt ctctggccgt caattgtgcc
      601 ggtatcgtgc atagccaccg ggttgtgggt cggggggacg tcgggctcag tcaagcggat
      661 tttgcgcgcg tgattgcggt caatctcatc ggtacgttta ccgtctgtcg ggcggtggcc
      721 tatgtcatgc agcggaatgt cccgaatgcg gctggcgagc gcggcgtcat tgtcaatacc
      781 gcgtccatcg ccgcctatga aggccagatc gggttagcgg cctatgctgc ctccaaagga
      841 ggcgtagcca gcctgacctt acccttagcg cgcgagttcg caagcctcgg cgtgcgtgtc
      901 atggccatcg cgccggggct ctttgccaca ccgatgtttg caggactgcc cgataaggtg
      961 aaggcgcgcc tggccgaaga tgtgcctttc ccgcggcgtc ttggcgatcc taaagaattt
     1021 gccgagctcg tgtgccatat ttaccagaat cccatgttga acggcgaggt catccgcttg
     1081 gacggggcct tgcgcatgcc acccaagtga ggatgattat ggactgtatg cttagcgaac
     1141 gcgagcaagc cttgctcgag cagaccgtcg agttttgctg caccgaagtc gaccccgcct
     1201 ctgaacactg ggaacagcac gaacgcctgc cgcgcgagat cttcaccaag gcaggagaac
     1261 ggggcctcct gggcttgacc gcgccctctg aatacggcgg tcagggcatc tcttatcgtg
     1321 cctatgtgct cattatcaaa gaactggcaa aacattacgc ggccttagcc ctcgatatcg
     1381 ccgcgcataa cgcactgtcg ctcggtcatc tcctggcatt tggctcagag cagcaaaaac
     1441 aagcctatgc ggcgcggttg atccgcggtg aatggctggg tgcctgggcc ttgaccgagc
     1501 ccaatgccgg tagcgacagc cgtgggatcg agactacggc gacagaaaca gagagcggtt
     1561 gggagatcac cggccacaag acctttatta cccagggacg cacagcggat ctcctcgtgg
     1621 tcatggcgag cagcggtaaa acggcggccg gcaaaaacga gatcagcgct ttcctggttc
     1681 taaaggatca ggtacagccg atccgcaaga tcccgaccta tggggtcagg gcgagcgaaa
     1741 cctcggagtt acgttttcac cgggctcagg gcgagctcct gggaccgcgt ggacgtgggc
     1801 aagagcaggc gctcgcggtg ctcgaccacg gacggctcgg cgtggcggcg gtggcgcttg
     1861 ggatc
//
LOCUS       DASQSL010001918         2089 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_150603, whole genome shotgun sequence.
ACCESSION   DASQSL010001918 DASQSL010000000
VERSION     DASQSL010001918.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2089
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150603"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..424
                     /locus_tag="VE844_19345"
     CDS             <1..424
                     /locus_tag="VE844_19345"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="adenylate cyclase"
                     /protein_id="HZC03423.1"
                     /translation="RGISAGHARWIAYLSEAYLLTGHTDEASGLARSALAFARDLKAW
                     GNEAYALRLLGEIHAHQDPPAAEAAEAAYRQALALAEELGMRPLLAHCYLGLGTLYVK
                     IGRLTQARAALSTAIEQFHAMEMTFWLPKAEASLAQTV"
     gene            984..1859
                     /locus_tag="VE844_19350"
     CDS             984..1859
                     /locus_tag="VE844_19350"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03424.1"
                     /translation="MMPAMPEKPATTPIPVQLSESECTQFILPHLTMPKRGPRCKLGY
                     HRVFNLILWVLYTGMQWKSLPVPKDTHGNAAIHYTTVYKVFARWSDDGSLEDAFIASV
                     GHLSDHNQLDLRVLHGDGTNTVAKKGGDGIGYSGYKHHKGEKVIAIIDNHGYVLAPLP
                     VAPANEADTVLLPEGLKGLKRMAKLTGLVLEGAYLNLDGGFDSTSNRKAIFNAGMIPN
                     ITENPRHRKRPKRGRKRLFNEAIHALRERVERTFAWEDKFKRLLLRFEHIQQRHYGMK
                     LMAYTLINVRRFCRA"
BASE COUNT          462 a          580 c          577 g          470 t
ORIGIN      
        1 cagaggcatc tcggccggcc atgcgcgctg gatcgcctat ctgagcgagg cgtatctgct
       61 gaccggccac acagacgagg cctcgggcct cgcccggagt gccctcgcat tcgcccgtga
      121 cctcaaggca tggggaaacg aggcctatgc cctccgactc ctcggggaga tccacgcgca
      181 tcaggatccc ccagcagccg aggcggccga agctgcctac cggcaggcgc tcgcgctggc
      241 cgaagagctg ggcatgcgcc cgctcctggc ccactgctat ctgggcctcg gcaccctgta
      301 tgtcaagata ggccgactga cacaagcgcg cgccgcacta tccacggcca tcgagcaatt
      361 ccatgcgatg gagatgacgt tctggctgcc caaggcggaa gcctcgctgg cacaaacggt
      421 ataacgctat gcggcagagc gcatagctga tcccacgatg atctcgaacc cactcgatct
      481 tcggcacatg gtgaccgctg tgccagcaat ggggtatccg acttctatgg ttcacgttgc
      541 aggcgcttga tcattcaagg ggagtatctg ctccggattt cttacaccac tgccaagaag
      601 ccggtgatgc gggggatgat ggaagtctcg gaaaaaagga gagagcaaga acatgaaaaa
      661 agggacgact gtagggtgga tgactgtgtt taccggtgtt cttctcgcga cagggagctc
      721 tgtgtatgct aatcatgcgg cgacgggaaa gggaacgtat gctgtcgctc atcaggttgt
      781 attacagttt cactttgttg tggccactgc gggcctaaat tttgtccagt ctgaatgggc
      841 tgaggtaggc ggttccctgt cgttccagac gacggctgtg aactaactgg ttgcgagttt
      901 tatcgattgg cctaatgtct tataacattt gaagataccg tctcctaagg acgagcccag
      961 ccatcttcaa atgaggccaa tggatgatgc cagcaatgcc agaaaagccc gccaccacgc
     1021 cgattcccgt ccagctctcc gaatcggagt gcacgcaatt tatcttaccg cacctcacca
     1081 tgcccaagcg tggacccagg tgcaaactcg gctaccatcg cgtcttcaac ctcatcttat
     1141 gggtcctgta tacgggcatg cagtggaaga gcttgcccgt gcccaaagac acccacggca
     1201 acgcggcaat tcattacaca accgtctaca aagtctttgc caggtggtcc gacgacggct
     1261 ccctcgagga cgcctttatc gccagtgtgg ggcatctgtc ggaccacaat caacttgatc
     1321 tgcgcgtgct gcatggcgat ggcaccaaca cggtggccaa aaaaggcggc gatggcattg
     1381 gctattcagg ctacaaacat cacaaggggg agaaagtcat cgcgatcatc gacaaccacg
     1441 gctatgtgtt ggctcctctg ccggtggcgc cggccaatga agccgatacg gtcttgttgc
     1501 cggaaggctt gaagggattg aagcgtatgg ccaagctcac ggggttggtg ctggaaggtg
     1561 cgtatctcaa tctcgatggt gggttcgatt caacgtcgaa tcgcaaggcg atcttcaatg
     1621 cggggatgat tccgaacatc acggagaatc ctcgccatcg caaacgtccc aagcgcgggc
     1681 gcaagcggtt gttcaatgaa gcgattcatg cgttacggga gcgagtcgag cggacgtttg
     1741 cgtgggagga caaattcaag cggttgctcc tccgtttcga gcacatccag cagcgtcact
     1801 acgggatgaa attgatggcg tacaccttga tcaatgtcag gcgtttctgt cgtgcctaaa
     1861 acttgcaacc agttaaatca gagcattggt cactattcac ggactctatt ttctatcctc
     1921 gcggggttga tctcacgttc cccttagtat ttggatttgg gctcccgctc gtagtgtcaa
     1981 ttccctttgt ccacttcctc gggataatcc tgacatacaa tctattgatt attagctcat
     2041 ttatattgtc ctcatatgcc actttccttt tggtccgata tctcacaga
//
LOCUS       DASQSL010001919         1410 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_53289, whole genome shotgun sequence.
ACCESSION   DASQSL010001919 DASQSL010000000
VERSION     DASQSL010001919.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1410
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53289"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            169..1086
                     /locus_tag="VE844_19355"
     CDS             169..1086
                     /locus_tag="VE844_19355"
                     /inference="COORDINATES: protein motif:HMM:NF033547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HZC03425.1"
                     /translation="MPILAHVHQLFSAEQCHAYIYILRWKGRLLHCPRCHSHNVGPWG
                     TYHYRPGLKRYRCKACRRTFNDLTQTLLAQSKQSLSHWILATFLLCLSCSSRRIAREL
                     GVHIRTSYRWCWWLRNVALSYETDRQCAGTIEADELYHTAGRKGQAKQGGKKPLGRRP
                     RRRRKKREPGRGHFDKDRPAIIAWVSRQGSVVVQAVRDFTVSTVQKAADLAVHAGSRL
                     YTDSASSYRALKGYLHEYVNHTQKEYARGDVHENRAECLFSLLKPYLRVFRGISKTNL
                     PGYLSFFQFLWNVRQRNAFQQAELILHAA"
     gene            1131..>1410
                     /locus_tag="VE844_19360"
     CDS             1131..>1410
                     /locus_tag="VE844_19360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03426.1"
                     /translation="MHGSLRPATNSDKLSVSDIKSVAGRWSGILYGRPGGQRGQDWVE
                     VAIHEDGTYTVASARTIGVAEVSGKVRLADGRLTSEGEKARVTFTLYQR"
BASE COUNT          321 a          400 c          405 g          284 t
ORIGIN      
        1 ctttaaattc tttgccatgt ttattgcccc ttagaaaata gactccctaa aagcaaaaaa
       61 accacgctca atttatcgta gtttgtagca gcgtaaaaac ttgagaaagc gctgagcatc
      121 tcctatcggt atcagagcca atctgatgac cacaggagat gctgagccat gccgattctc
      181 gcccacgtcc accaactctt cagcgccgaa caatgtcacg cctacatcta tatactccgg
      241 tggaaaggtc gcctgctcca ctgtccccgg tgtcacagcc acaacgtcgg cccttggggc
      301 acgtaccatt accgaccggg gctcaaacgc taccgctgca aagcctgtcg gcggacgttc
      361 aatgacctga cgcagacgct gttggcccag agtaagcagt cattgtcaca ctggattctc
      421 gcgaccttcc tgttgtgcct gtcgtgttcg tcccggcgca ttgcccgaga gctgggggtc
      481 cacatccgga cgagctaccg ctggtgttgg tggctccgaa atgtggcgtt gtcctatgag
      541 acggatcgcc aatgcgccgg cactattgag gccgacgaac tctatcacac cgctgggcgc
      601 aaaggccaag ccaagcaggg tggcaaaaag cccttgggac gtcggccgcg tcgtcgccgg
      661 aagaagcgcg agcccggccg gggtcatttc gacaaagatc ggcccgcgat catcgcgtgg
      721 gtcagccgcc aaggttccgt cgtggtgcaa gccgtccggg atttcaccgt cagcacagtg
      781 cagaaagcag ccgacctcgc agttcacgcg ggcagccggc tttatacgga ctccgccagc
      841 agctatcggg cgttgaaagg atacctccat gagtacgtca accataccca gaaggaatat
      901 gcgcgggggg atgtacatga gaatcgggcc gagtgtctat tttcgttgct caagccctac
      961 ttgcgagtgt ttcggggcat cagcaaaacg aacctgccag ggtatctgag cttctttcag
     1021 ttcctgtgga acgttcgaca acggaatgcg tttcagcagg ccgagctgat cctacatgcg
     1081 gcatgagacc caactgttgc cagcaaagcc aggaagggag agttcgtcaa atgcatggat
     1141 cacttcgacc tgctacaaac agcgataaat tgagcgtttc cgatatcaag agtgtggccg
     1201 gaagatggtc tgggatccta tacggcagac cgggtggaca gcgcggccag gactgggtcg
     1261 aggtggccat ccatgaagac ggcacttata cagtggcgag cgcgcgcacc attggggtcg
     1321 ccgaggtgag cggcaaggtc cgcctcgcgg acggcaggct cacctcagag ggtgaaaagg
     1381 ctcgtgtgac gttcaccctt tatcaacggg
//
LOCUS       DASQSL010001920         1587 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_37911, whole genome shotgun sequence.
ACCESSION   DASQSL010001920 DASQSL010000000
VERSION     DASQSL010001920.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37911"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(160..>1587)
                     /locus_tag="VE844_19365"
     CDS             complement(160..>1587)
                     /locus_tag="VE844_19365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013823650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative PEP-binding protein"
                     /protein_id="HZC03427.1"
                     /translation="DDIHGIAVSAGVLTSRGGVTSHAAVVTRGMGKPCIVGCEAVEVD
                     LEQGLFTANGRTVHEGEYISVDGNTGNIYYGELETVRPHLGDLNEAKELLTWADQTRT
                     LGVMANADTPTDASQALAMGAEGIGLCRTEHMFLDPRRLPAVRQMLLNAEAAQEWRRD
                     HPELVDGPVDKSALPDEVGDFYEALAEVRQLQTSDFAGILRVMEHRPVIIRLLDAPLH
                     EFLPPYEELLTELTELRAAGKASPEDLRDKEEFLRLVGSHRESNPMLGHRGCRLGLSF
                     PAIYQMQVEAIITAAAGLIGEGIEVHPEIMVPLTVTVEEMRRLRHELTGVANRVQEHL
                     GVTVPYKFGTMIETPRAALTAGEIARESEFFSFGTNDLTQMTYGFSRDDAEGKFLRWY
                     VEESILPADPFATIDPEGVGVLIRMAVASGREARPDIELGICGEHGGDPDSVSFCHRA
                     GLDYVSCSPYRVPVARLAAAQAALA"
BASE COUNT          342 a          484 c          432 g          329 t
ORIGIN      
        1 gtcagggtga gcttcattgt gaccaacctc agctatccac ccaacggcat agtccacttc
       61 tacaacagca ggggaacggc agagcagtgg ataaaggagg gcaagtatgc cttaaccttg
      121 tatcaaatat ataattccgt aattatcatc tggctggctt taagccagag ctgcttgagc
      181 ggcggccagc cgggccacgg gcacccggta aggggagcag cttacgtagt ccagaccagc
      241 acgatgacag aaggacacgc tgtccgggtc tcccccatgc tcaccacaga tgcccagctc
      301 aatatccggt cgggcctccc gtcccgaagc cacggccata cgtatcaaga ctccaacacc
      361 ttctgggtcg atggtggcga aaggatcggc cggcaggata ctctcctcta cgtaccatcg
      421 gaggaacttg ccctcggcat cgtcgcgact gaaaccgtag gtcatctgag tcagatcgtt
      481 ggtaccgaag ctgaagaact ctgactcccg ggcgatttct ccggcggtta atgcggcccg
      541 cggcgtctca atcatggtgc cgaacttgta gggcacggta acaccgaggt gctcctgcac
      601 ccgattggcg accccggtca gttcatgacg aagccgtctc atctcttcaa cagtcaccgt
      661 caacgggacc atgatctccg ggtgtacctc aatgccttct ccgatcaatc cagcggcggc
      721 agtgataata gcctctacct gcatctggta aatagctggg aagctgaggc ccaaccggca
      781 acctcggtgg cccagcatgg ggttagactc ccgatgagag cccaccagac gcaggaactc
      841 ttctttatcc cgaaggtcct caggggatgc cttcccggca gcccttaact ccgtcagttc
      901 agtcagcaac tcctcatatg gggggagaaa ctcatgaagt ggggcgtcca gcagccggat
      961 aataaccggc cgatgttcca ttacccgcag tataccagcg aagtcactgg tctgaagttg
     1021 acgtacttcg gccagggcct cgtaaaagtc accaacttcg tcaggcaatg cggacttatc
     1081 gacaggccca tcgaccagtt ccgggtgatc ccgtcgccac tcctgggcag cttcggcgtt
     1141 gagtagcatt tgacgtaccg caggcagacg gcgcgggtcc aggaacatgt gctcggtgcg
     1201 gcaaaggccg atgccctcag ctcccattgc taaagcctga gaagcgtcgg tgggagtgtc
     1261 ggcgttggcc atcactccta aggtcctggt ctggtcggcc caggtgagca actctttggc
     1321 ttcgttgagg tcgcccaaat gcggacgcac tgtctccaat tctccatagt aaatgttgcc
     1381 ggtgttgcca tctacgctaa tgtactcgcc ttcatggacc gttcgtccat tggcggtgaa
     1441 aagcccctgt tccaggtcta cctccacagc ctcacatcct acgatgcagg gcttgcccat
     1501 tccccgggtc accactgcgg cgtggctggt aacgccgccc cggctggtca gaactccggc
     1561 agacactgca atgccatgaa tatcgtc
//
LOCUS       DASQSL010001921         1028 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_81374, whole genome shotgun sequence.
ACCESSION   DASQSL010001921 DASQSL010000000
VERSION     DASQSL010001921.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81374"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            28..>1028
                     /locus_tag="VE844_19370"
     CDS             28..>1028
                     /locus_tag="VE844_19370"
                     /inference="COORDINATES: protein motif:HMM:NF014443.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter TrkG"
                     /protein_id="HZC03428.1"
                     /translation="MLLPALYSLLAADENARAFGIPAVVALTLGVGLSFVIRNPSAYV
                     SRRDVFLIVVLGWLGLAAIGSLPFVLSGLMEPVDAFFETMAGFTTTGASTILTPEEVA
                     PSLLLWRSLTQWVGGIGIVLLFVAVGPRVGFGATQLYSAEVATPMPERITPRIRDTAK
                     ILAYVYGALTFGIMAALLLAGMALFDAINHALTTVSTGGYSTRSDSIAAFDSWAIELC
                     VVVGMLLSGVNFALYFQAAQGRLGRVLGNRELLAYLGIAATGTLLMTMSLYAFDYQDS
                     PVFAFREALFWSVSLLTGTAFSSTADWKAWDPFSQGLLMLFMAIGACAGSTSGGVKVV
                     "
BASE COUNT          160 a          293 c          328 g          247 t
ORIGIN      
        1 gtcattattg ccgccggagg agcagcaatg ctcctgccgg cgctttactc gctgctggcc
       61 gccgacgaga atgcacgggc ctttgggatt ccggcggttg tggccctgac tctaggagtg
      121 ggcctctctt ttgtaatccg caaccccagc gcgtacgtct caaggcggga tgtgtttcta
      181 atcgttgtac tgggatggtt ggggctggca gccatcggct cgctgccgtt cgttctctcc
      241 ggcctcatgg aaccggtgga cgccttcttc gagacgatgg ccggattcac gactaccgga
      301 gcttcgacga tcctgacgcc ggaggaggtt gcgccatccc tgctgctctg gcggagtttg
      361 actcagtggg ttggggggat agggatcgtg cttctcttcg tggctgtcgg accgcgggtg
      421 ggcttcggag ccacccagct ttactcggct gaggtagcaa ctccgatgcc agagagaatc
      481 actccgcgta tccgggacac ggccaagata ttggcctacg tctatggcgc tctgacgttc
      541 gggatcatgg ctgcgctact gctggccggg atggccctgt tcgatgctat taatcacgct
      601 cttaccaccg tatccaccgg tgggtactcg acccgctcag actccatagc cgccttcgat
      661 tcttgggcca tcgagttgtg cgtggtagtg gggatgctgc tctcgggggt gaatttcgcc
      721 ctgtacttcc aggccgcaca gggccggcta gggcgcgtac tcgggaatcg agagctgcta
      781 gcctatctgg ggatagccgc tacaggaacg cttttgatga ccatgtctct ttacgccttc
      841 gactaccagg attcgccagt gttcgccttc cgggaggcac tcttttggag cgtgagcctc
      901 cttaccggga cggccttcag cagtacggcg gactggaaag cctgggaccc attctcccag
      961 ggcttgctga tgcttttcat ggctatcgga gcttgtgccg ggtcgacgag cggtggcgta
     1021 aaggtggt
//
LOCUS       DASQSL010001922         3686 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_119018, whole genome shotgun sequence.
ACCESSION   DASQSL010001922 DASQSL010000000
VERSION     DASQSL010001922.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3686
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119018"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..562
                     /locus_tag="VE844_19375"
     CDS             <1..562
                     /locus_tag="VE844_19375"
                     /inference="COORDINATES: protein motif:HMM:NF012464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZC03429.1"
                     /translation="QDPDAQLLALREYAAQRGLIVYKEYIDYVSGDFTKRQGQRLKDV
                     AYQELMDDVNRRIVDCVIVWKYDRFARSLSVLISTLQQFNSLGVDFISYTQHIDTTTP
                     MGRLFFHIIGSFAEFEWEMIGERVRAGLAKVRAQGKTLGPPIRDRDAGARIQALRDQG
                     FSLREIARREGYSPAGVLKILRRSKV"
     gene            562..3558
                     /locus_tag="VE844_19380"
     CDS             562..3558
                     /locus_tag="VE844_19380"
                     /inference="COORDINATES: protein motif:HMM:NF033527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3 family transposase"
                     /protein_id="HZC03430.1"
                     /translation="MLHVSDTAYPRLKAHPTERDLEELFTPNLAELTFAYKYTRRLGP
                     RVALLVLLKTFQRLGYFVKFADVPPAVIQHIIRTAQCPDIPDDITAYDNSTYRVRYMN
                     LVRIFMNVSAFDAVARRIVIEASVAAARTRDDLADIINIAIEELVRQRYELPVFNTLL
                     HIARTARSAVNRGYHRHIHQALDEATKARLQAMLRRPPGQSRTPWDQVKTEPRRPTHH
                     NVRAFLNQLDWLRAQSTETQVFDAIPGVKVRQFAAEAWALNAAVMNELVEPKRYTLMA
                     ALLQGQLARALDDIAEMFIRQVHQMHNSAKEALARYQTEHAGEVDALITLLHETVRAY
                     QGEGSREERFAAIEALLGPDADDILQRCEAHAALAGDNHFPFLLKSYQSRRSLLLRVL
                     SSVELRASSQDRALEEAIAFVLAHKDHRRVKLKIIKQERLPDGSERLVQKIDLSFVSD
                     KWWLLVTGKVSQQNPPTEVDRRYFELCALSQVMQELKSGDLYIPGSADYSDYREQLVS
                     WEDYQREIATYGQQAGVPIEPKAFIGQLRAQLDEAAQQADTGFPENEYLRIENGVPVL
                     KRLHAKPEIEGAKRLEQLLQERTDPIGIIDALIDTEHWLSWTHHFGPLSGLEAKLDSP
                     RERYLVTAFCYGCNLGPTQTARSIKELDRRHIAFVNQRHVTEERLNEAITTVVNAYAS
                     LGLQKLWGSGRSASADGTQWELYPQNLIATYHIRYGDYGGIGYYLVADSYIALFSRFI
                     ACGTWEGHYILDFINENRSAVQPDAIHSDTQGQSETIFGLAYLLGIQLMPRIRHWKHL
                     HFYRPSKDSHYHHINSLFTTDIHWELIETLLPDMLRVAVSVKLGCVTPSAILRRLGTY
                     SRKNKLYFAFRELGRVTRTIFLLRYLSDPELRRQIQRATNKSEAFNKFAQWVLFGGGG
                     VIAENIRDEQRKIIKYNHLVANLLIFHTLVTMMRTLQRLENEGHVIEKEVLEVLSPYQ
                     TEHINRFGNYTVNMNRVPEPLDFKLR"
BASE COUNT          818 a         1080 c         1024 g          764 t
ORIGIN      
        1 tcaagatccg gacgcgcagc tgctggcgct gcgtgagtat gccgctcaac gcggtcttat
       61 cgtgtacaag gaatacatag actatgtgag cggcgatttc accaagcgcc agggacagcg
      121 actgaaggat gtggcgtacc aagagctgat ggacgacgtg aaccgccgca ttgtcgattg
      181 cgtaatcgtc tggaaatacg atcgctttgc ccgctccctt agtgtgctca tctctacgct
      241 ccagcagttt aacagcctgg gcgtggactt tatcagctac acccagcata tcgatacgac
      301 tacgcccatg gggcggctgt ttttccatat catcggttcg ttcgccgagt tcgaatggga
      361 gatgatcggc gagcgggtac gcgcaggcct tgctaaagtg cgtgcgcaag ggaaaaccct
      421 tgggccaccg atacgtgatc gtgacgcggg ggcacggatt caggcgctgc gagaccaagg
      481 tttcagctta cgcgagatcg cccgacgcga gggctattcg ccagccgggg tgctgaaaat
      541 cctgcgccga tccaaggtct gatgctccac gtcagtgata ccgcctatcc ccggctcaaa
      601 gcccacccga ccgagcgcga cctggaggaa ctcttcacgc ctaacttggc ggagctgacc
      661 tttgcttaca agtacacgcg ccgcctaggc ccacgcgtgg cgttattagt gttactgaaa
      721 acctttcagc ggctgggtta cttcgtgaag tttgccgacg tgccgccggc cgtcattcaa
      781 cacatcatcc gcacggcgca gtgcccggac atccccgatg atatcaccgc ctatgacaac
      841 agtacctatc gggttcgtta catgaacctg gtgcgtatct ttatgaacgt cagcgccttt
      901 gacgccgtgg ctcggcggat cgtgatcgaa gccagcgttg cggcggcgcg cactcgcgac
      961 gatctggccg acattatcaa cattgccatc gaggagttgg tgcggcagcg ctatgaattg
     1021 ccagtgttca atactctatt gcatatcgcc cgtaccgcac gctcggcggt caatcggggt
     1081 tatcaccggc acattcacca ggcgctggat gaagcaacca aagcccgcct gcaggccatg
     1141 ctgcggcggc caccgggaca atcgcgaacc ccgtgggatc aggtgaaaac cgaaccgcgc
     1201 cggccaacgc accataacgt gagagcgttt ctgaaccaac tcgattggct gcgtgcgcag
     1261 agtacagaga cccaggtctt cgacgccatc cccggggtga aggtacggca gttcgccgcc
     1321 gaagcgtggg cgctcaacgc cgctgtgatg aacgagctgg tcgaacctaa acggtatacg
     1381 ctgatggcgg cattattgca gggccaattg gcgcgggcgc tggatgacat cgccgagatg
     1441 ttcatccgcc aagtccatca gatgcacaac agtgccaagg aagcgctggc gcgctaccaa
     1501 accgagcacg ccggtgaggt cgacgcgttg atcacgcttc tgcatgagac ggtacgcgct
     1561 tatcaaggcg aaggcagccg cgaggagcgg tttgccgcga ttgaagccct gctaggaccg
     1621 gatgccgatg acatactcca gcggtgcgaa gctcacgccg cgcttgccgg cgataaccat
     1681 ttcccgtttt tgctaaagtc ttatcaatcg cggcgttcgc tgctcctgcg cgtgctctca
     1741 agcgtcgagt tacgcgccag ctcccaggac cgcgcgctcg aagaggccat cgccttcgtg
     1801 ctggcacaca aagatcaccg gcgtgtgaag ttgaaaatca tcaagcagga gcggctgccc
     1861 gatgggtcag aacgcctggt ccagaaaatc gatctgtcat ttgtctcgga caagtggtgg
     1921 ctgctggtaa cgggcaaggt cagccagcag aacccaccga cagaggtgga tcgccgttat
     1981 tttgagctgt gtgccctgtc ccaagtgatg caggagctga aatcgggtga cctgtacatc
     2041 cccggcagcg ccgactacag cgactaccgt gagcagttgg tgtcatggga ggactaccaa
     2101 cgcgagatcg ctacttacgg ccagcaagcc ggggtgccga tcgagcccaa agcctttatc
     2161 gggcaactgc gcgcccaatt agacgaggct gcccaacagg cggatacggg ctttccggaa
     2221 aatgaatacc tgcggatcga aaatggcgta ccggtcctta agcggctgca tgccaagcct
     2281 gagatcgagg gcgcaaagcg tctggagcaa ctgctgcagg agcgcaccga cccaatcggt
     2341 attatcgatg cgttaatcga caccgaacac tggctgagct ggacacatca tttcggccct
     2401 ctgtccggtc tcgaagccaa gctggacagc cctcgggagc gttatctggt cacggcgttt
     2461 tgctatggat gtaacctggg tccaacgcaa accgcacgct cgatcaaaga gctggaccgc
     2521 cggcatattg cctttgtcaa ccagcggcat gtgaccgaag aaaggcttaa tgaggcgatc
     2581 acaacggtcg tcaacgccta tgccagccta gggctacaga aactctgggg ttccggccgc
     2641 tctgcctcag ccgacggcac ccagtgggaa ctctatccgc agaacctgat cgccacctac
     2701 cacatccgtt acggcgacta cggcggcatc ggttattacc tggtggccga ctcctacatc
     2761 gcgttgttct cgcgctttat cgcctgcggc acctgggaag gccactacat cctggatttc
     2821 atcaacgaaa accgctccgc cgtacaaccc gacgcgatcc actcggatac ccagggccag
     2881 agcgagacga ttttcgggtt agcctaccta ttgggtatcc agctcatgcc acggattcgg
     2941 cactggaagc atctgcattt ctaccgccct agcaaagaca gtcactacca tcacatcaat
     3001 tcgctgttca ccactgacat ccactgggag ctgatcgaaa cgctattgcc cgacatgctg
     3061 cgcgtggcag tatcggtcaa gctcgggtgt gtcaccccat cggctatcct acggcgcctg
     3121 ggcacctata gccgtaagaa taaattatac tttgccttca gggagttagg ccgcgtcacc
     3181 aggacaattt tcttgctccg ttatctctcc gatcctgagc ttcggcgcca gattcaacgc
     3241 gcgacgaaca aaagcgaagc ctttaataag tttgcccaat gggtgttgtt cggcggcggc
     3301 ggtgtcattg ccgagaatat tcgcgatgaa caacggaaaa tcatcaaata caatcacctg
     3361 gttgcaaact tgctgatctt ccatacgctg gtcactatga tgcgaacgct gcagcggtta
     3421 gaaaatgaag gacacgtgat tgaaaaggag gttttggaag tgctcagtcc ttatcaaacc
     3481 gagcacatca accggttcgg taactacacg gtcaacatga atcgcgtccc ggaaccgctc
     3541 gatttcaagc tacgataact cactgcttgc tcgctgtgtg aggatattta tcgaatcgtt
     3601 gccattgccc ctttccctcc cctcgttggg gcaacgataa gacaatttcc cagctcccgt
     3661 ctctcttttg ttgatctgac gtgaag
//
LOCUS       DASQSL010001923         1252 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_93927, whole genome shotgun sequence.
ACCESSION   DASQSL010001923 DASQSL010000000
VERSION     DASQSL010001923.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93927"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(144..>1252)
                     /locus_tag="VE844_19385"
     CDS             complement(144..>1252)
                     /locus_tag="VE844_19385"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HZC03431.1"
                     /translation="RTGVQVTVDFIAHLQLPTKTAAEVQSQSGHDIMFFLRAQEVALY
                     EHHLIDMTDLVAEFKDTNGGYYPWIKDYLELNGVWRAIPWFTGGGFLGCYNEVTFQKY
                     GMAIPDTWEDVKNTCKQLKQHGHPAGIAISHCVDANTTFWYILWCYGGKVLEADGKTV
                     AIKSDATKQVLEYYKELYMDAMEPDVLSWDDASNNRYLLSEKGAWVHNPISIYNVAKS
                     RNLPIAKTMNHHLTPQGPAGRVMAAQVASLGIWKFSQQQEEAKKFIRYIFQPENFNRW
                     MEAAAGYNMGPQRGYAKHPLWERDPKITMVPTQLDFGRPYGWPAKPSPAIGEIDVTYV
                     LPDMVAKVVTGSSIDEAMTWCEQQIQKIVKGQRT"
BASE COUNT          251 a          360 c          343 g          298 t
ORIGIN      
        1 actcccactg acatgtgttc tccttcctgg caagacatcg gctcgcctac cggtctttgt
       61 caagggcgcc agtactttag cgtcaaatcg agtatctgtc aacacagggg agcacgtatg
      121 gacagagcgc gacagcgacg cacttacgtg cgctggccct tgacgatctt ctggatttgc
      181 tgctcgcacc acgtcatggc ttcatcgatg gagctaccgg tcacgacttt agccaccatg
      241 tcgggcagca cataggtgac gtcgatttca ccgatcgccg gactcggctt cgccggccag
      301 ccatatgggc ggccaaaatc cagttgtgtg ggcaccatcg tgatcttggg atcgcgctcc
      361 cagagcggat gcttggcata gccacgctgc ggacccatgt tatagcctgc ggcggcctcc
      421 atccagcgat tgaagttctc tggttgaaag atgtaacgga tgaatttctt ggcttcctcc
      481 tgctgctggg aaaatttcca gatgcccaac gacgcgacct gtgcggccat cacccgtccc
      541 gctggtcctt gcggtgtaag atggtgattc atagtcttgg cgatcgggag gttacgcgac
      601 ttggcaacgt tatagatgct gatgggatta tgcacccagg cgcccttctc cgagagcagg
      661 tagcgattat tactggcatc atcccacgac agcacatccg gttccatggc atccatgtac
      721 agctctttgt aatattccaa tacctgcttg gtcgcatccg acttgatggc gacagttttg
      781 ccatcggcct cgaggacctt ccccccgtag caccacaaga tataccagaa ggtggtattg
      841 gcgtctacgc agtggctaat ggcgatgccg gcaggatgcc cgtgttgctt gagctgttta
      901 cacgtgttct tcacgtcctc ccatgtatcg ggaatcgcca tgccatactt ctgaaaggtc
      961 acctcattat aacagcccag gaacccaccg ccggtgaacc atgggatagc gcgccagacc
     1021 ccgttgagtt ccagataatc cttgatccag ggatagtagc cgccgttggt gtctttgaac
     1081 tccgccacga gatcggtcat atcgatgagg tgatgttcgt agagtgccac ctcctgggcg
     1141 cgcaggaaga acatgatgtc atggccggac tggctttgga cctccgctgc cgtcttggtt
     1201 ggcagctgca ggtgcgcgat gaagtcaacc gtcacctgta cgccggtgcg ct
//
LOCUS       DASQSL010001924         1322 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_200990, whole genome shotgun sequence.
ACCESSION   DASQSL010001924 DASQSL010000000
VERSION     DASQSL010001924.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1322
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200990"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..562
                     /locus_tag="VE844_19390"
     CDS             <1..562
                     /locus_tag="VE844_19390"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZC03432.1"
                     /translation="WQYRPEEAKKLLAEAGYPNGFETTLFYYEYFPQMTSQIQLVQQD
                     LKRNLNIELKITKNDYTSYFGRYAEGKWEGTAWGFQTGYAVSLDERTYQYMHSKSPKN
                     YFHVNDAVIDELATKLRQTPERAEQRALTKKIVEREHDQVLRMWMPYDAGFSLWQPHL
                     RNIGQLDLRTNFGYGSSTLARLWIDK"
     gene            672..>1322
                     /locus_tag="VE844_19395"
     CDS             672..>1322
                     /locus_tag="VE844_19395"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC03433.1"
                     /translation="MHKYIIRRLLLAIPVLLLSSLIVFGLMRVMPGDALTALMAESGN
                     VSERELQKLRKDLGLDLPYYEQYLIWLWQMVSLNPGYSIFTSEPIPVALKKSIPVTIE
                     LALLAMTLGLVIAIPVGVLSATRQDKPADYVGRLVAISGLSLPDFWLGTLVITFAAIW
                     FSWIPPLGYASLWESPWTNLQQFLLPAAVLGFRLSAATMRMTRSTLLEVLREDYVRT"
BASE COUNT          284 a          380 c          374 g          284 t
ORIGIN      
        1 ttggcagtac cgcccggaag aagcgaagaa gctgctggca gaggcaggct accccaatgg
       61 ctttgaaacg accctctttt actatgaata cttcccgcag atgacctccc agatccaact
      121 ggtgcaacag gatctcaagc gcaacctcaa catcgagctg aagatcacca agaatgacta
      181 cacgagttac tttggccgct atgccgaagg gaaatgggag ggcaccgcct ggggatttca
      241 gacagggtac gcggtgagcc tcgacgagcg gacctatcag tacatgcact cgaagtcgcc
      301 gaagaactat ttccacgtca acgatgccgt catcgatgag ctcgccacca agctgcggca
      361 aaccccggag cgggctgagc aacgggccct caccaagaaa attgttgagc gagagcacga
      421 tcaagtcttg cgcatgtgga tgccctatga tgctggcttt tcattatggc agccgcactt
      481 acggaacatc gggcagttgg acctgcgcac gaactttggc tacgggagtt cgaccctcgc
      541 gcgtctgtgg atcgataagt agtggaacaa ggcagccagg caccgaggca ccgagacatc
      601 aagtcggggc gcagcagacc atgccccgac aacagatctt tctctcgatg cctgcgttat
      661 gcagaggccc catgcacaag tacataatcc gccgactctt gctggctatc cccgtcttac
      721 tcctctcgtc gctgatcgtg ttcgggttaa tgcgggtcat gccaggggat gcgttgacgg
      781 cgctgatggc ggagtctggg aacgtcagtg aacgggaact gcagaaactc cgcaaggatc
      841 tagggcttga tctcccctat tacgagcagt atctgatctg gctgtggcag atggtaagcc
      901 tcaaccctgg ctactcaatc ttcaccagcg agcccattcc agtggctctg aaaaaatcta
      961 tccccgtcac tatcgagttg gcgcttttgg cgatgacctt ggggctggtc atcgccattc
     1021 cggtcggggt gctctcggcc acacgacagg ataaacccgc agactatgtc ggacggctgg
     1081 ttgccatctc tggcctgtca ttgcctgatt tctggctcgg gacgttagtc atcaccttcg
     1141 cggcgatctg gtttagctgg atccctccgt tgggttatgc cagcctgtgg gagtcgccgt
     1201 ggacaaatct ccaacaattc ctgttgccgg ctgcggtgct gggcttccgc ctctcagcgg
     1261 cgaccatgcg tatgacccgc tcgaccctct tggaggtgtt gcgggaggac tacgtgcgca
     1321 ca
//
LOCUS       DASQSL010001925         3383 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_53338, whole genome shotgun sequence.
ACCESSION   DASQSL010001925 DASQSL010000000
VERSION     DASQSL010001925.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3383
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53338"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(122..889)
                     /locus_tag="VE844_19400"
     CDS             complement(122..889)
                     /locus_tag="VE844_19400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019920701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC03434.1"
                     /translation="MHWPVLTIASFTLLEALRSRLLWLVFAVLLATFGLAEFIGSIAL
                     TESLALKSGMLGAGLRLFAVFMISLFVTTSMVREMNDKVLELILALPIPRAAYYFGKL
                     LGFSLVALVTAVLIGLSLLLYVPPSSLLAWTTSLLCELFIIAALSLLCLFSLHQVTFA
                     LSMVAGFYLLSRSISAIQLMGRSPLVDADLSQHAIGTLVDIIAFLLPELHRFTPSRWL
                     IYHTATWQELAPILGQTAVYLVLLIGAGLFDLYRKNL"
     gene            complement(889..1314)
                     /locus_tag="VE844_19405"
     CDS             complement(889..1314)
                     /locus_tag="VE844_19405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016500906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HZC03435.1"
                     /translation="MNLRRRRDKENVDINLISLIDVLLFLVIFFMVSTTFVERAQIAL
                     TLPKASTEPSAAQQDKVEIAIDPVGRYYVNNKALINTQLATLKHAIAETTQGMKDPAV
                     MISADAKTAHQAVVTALDAARQLGLVRITFVTESVPENP"
     gene            complement(1311..1949)
                     /locus_tag="VE844_19410"
     CDS             complement(1311..1949)
                     /locus_tag="VE844_19410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005959795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HZC03436.1"
                     /translation="MFELIKAGGWMMLPIMVCSVMTVAIVIERLWTLQTKRVIPSNLV
                     SQVCQWFYTGHLDPKHIQSLKAGSPLGRILAAGLVNMNHERAIMKESIEEVGRHVVHE
                     LERYLNTLGTIAVISPLLGLLGTVTGMIRAFSAINAQGVGDPTVVAGGIAEALITTAA
                     GLIVAIPALMFHRHLHGRVDELVITMEQEALKLVEVIHGDREPEDQYLRGSR"
     gene            complement(2126..2386)
                     /gene="rpsT"
                     /locus_tag="VE844_19415"
     CDS             complement(2126..2386)
                     /gene="rpsT"
                     /locus_tag="VE844_19415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003094744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HZC03437.1"
                     /translation="MANTPSAAKRARQAEQRRARNASRRSVLRTYIKKVVRAIEAKDK
                     DAAQAAYSQAVPIIDRMVTQGIIHKNKAARHKSRLNAGVRAL"
     gene            2497..2706
                     /locus_tag="VE844_19420"
     CDS             2497..2706
                     /locus_tag="VE844_19420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019233451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin transmembrane helix small protein"
                     /protein_id="HZC03438.1"
                     /translation="MSIGKLIVVLMLIAIIASLGVALAQMIRDKGQTDRTVKALTVRV
                     ILSIALFIFLMVAFAAGLLTPHSIY"
     gene            2852..>3383
                     /locus_tag="VE844_19425"
     CDS             2852..>3383
                     /locus_tag="VE844_19425"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020648544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HZC03439.1"
                     /translation="MPPVLKKCADVPRLETALTGPLGPIESQLLESKPVIEDWFQTQW
                     QETPPPFYASVDLRNAGFKIAPVDTNLFPAGFNNLNPAFWPLCSQAVHSRIEQLKYGI
                     RRILLVPESHTRNLLYLENVAVLKAIIEHAGFEVRLGSLIPDLKASLDIALPSGRRVR
                     LEPLVRSGDHVRVADFD"
BASE COUNT          816 a          895 c          913 g          759 t
ORIGIN      
        1 agcttgcggt tcgggacgca gagcatgcca gcgtagctga gcgataaaac cccatcctag
       61 caaggcgata accaataggg gtacggaact aattgagcgc gtgcgtggca cagaggctca
      121 ttcacaggtt ctttcgatac aagtcaaata accccgcgcc tatgagcaac accagataga
      181 ccgcggtttg gccaaggatg ggggcaagct cctgccaggt ggcggtgtga tagatcagcc
      241 accggctcgg ggtaaagcga tgcaattcgg gcagcaagaa ggcgatgata tcgaccaggg
      301 taccgatcgc gtgctgggag aggtcagcat cgacgagagg actccggccc atcaactgga
      361 tagcactgat gctgcgcgag agcagataaa aacctgccac catgctcaaa gcgaacgtaa
      421 cctgatgcag agaaaacagg caaagcaaac tcaaggccgc aataataaat agctcacaca
      481 gtaaagacgt cgtccaggcc aggagggatg agggtggtac gtagaggagc agcgacaggc
      541 cgatcaggac ggcggtcacc aaggccacca gtgaaaaccc caagagtttg ccaaaataat
      601 aggcggctcg tgggatcggt aaggccagga tcagctccaa gaccttgtca ttcatctcgc
      661 ggaccatgct ggtggttaca aataggctga tcatgaatac cgcaaacaga cgcaacccgg
      721 cccccaacat accgctcttg agcgctaggc tttcggtaag cgcgatgctg ccgataaatt
      781 ccgccagccc aaaggtagct aacagcacgg caaagacgag ccaaaggagc cggctccgta
      841 gcgcttcaag cagagtaaat gaagcgatcg tcaaaaccgg ccagtgcatc aaggattttc
      901 cggtaccgac tcagttacaa aggtgatccg cacaagccca agctgacggg ccgcatcgag
      961 cgcagttacc accgcttggt gggcagtctt ggcgtcggcg ctgatcatga ctgcaggatc
     1021 cttcatcccc tgggtagtct cggcgatcgc gtgctttagg gtggcaagct gggtgttgat
     1081 gagagccttg ttattgacgt aatagcggcc gactggatcg atagcgatct cgaccttgtc
     1141 ttgctgcgct gcagacggct cagtgctggc cttgggcagg gtgagcgcga tctgggctcg
     1201 ctctacgaag gtggtggaca ccatgaaaaa gatcaccagg aacaacagca catcgatgag
     1261 cgagatcaga ttaatatcga cgttctcttt gtcccggcgt ctgcgcagat tcatcggctg
     1321 cccctgagat actgatcctc cggttcccga tccccatgaa taacctcgac cagcttcagg
     1381 gcctcttgct ccatggtgat caccagttca tccacccgcc cgtgtaaatg gcggtgaaac
     1441 atcaaggcgg gtatggccac aatgagtcct gcggctgtgg tgattagggc ctcggcaatg
     1501 ccccctgcta ccacggttgg atcaccgaca ccttgagcat tgatcgcaga aaaggcccgg
     1561 atcatcccgg tcaccgtgcc caatagaccc agcagaggac tgatgacggc gatcgtcccg
     1621 agcgtattta gatagcgctc caactcgtgg accacgtggc ggcctacctc ttcgatgctc
     1681 tccttcataa tggcccgctc atggttcata tttaccaagc ctgcagccag tatgcgcccg
     1741 agcggcgatc ctgctttgag gctctggatg tgtttgggat ccagatgtcc tgtatagaac
     1801 cactggcata cctggctgac gagattggat gggataacgc gtttggtctg tagcgtccac
     1861 aatcgttcga tgacgatagc cacagtcatc acggaacaca ccataatggg tagcatcatc
     1921 cagccacccg ctttgattag ctcaaacacc ttgctccgct ccccctcact gctctaagag
     1981 gataaaccta tatcaaacgt gactcatcga aaagggtgct tgggaggcat aaggcctgtg
     2041 tatatattcg taggggagca cgggggatgt ctgcacttta agaccctctc gaccgcaggg
     2101 tccatatgtg gcctaaagac tttggttaaa gcgcacggac ccccgcattt aaacggcttt
     2161 tatggcgcgc ggccttgttt ttatgaatta tcccttgcgt caccatccga tcaatgatcg
     2221 gaacagcttg actgtaagca gcctgagcag cgtctttatc cttggcctcg atggcccgga
     2281 cgaccttctt gatataggtg cgcaataccg agcgccgact cgcgttgcga gcgcggcgct
     2341 gttccgcttg ccgtgcgcgt tttgcggcag aaggtgtatt tgccaatgtt taagctccca
     2401 taaataataa agaaaatgaa tatgcttttt tcctctcaat ttgtcaatgt ccgctatact
     2461 aaacatacct atattacagc aggtgagaga ggcttcatgt ctatcggcaa gctgattgta
     2521 gtgttaatgc tgatcgcgat tattgccagt ttgggtgtcg ccctggcgca aatgatacga
     2581 gataaagggc aaaccgatcg cacggtaaag gcgttgaccg tgcgcgtgat tctatcgata
     2641 gcgttgttca tctttttgat ggtggcgttt gcagcgggtt tacttacgcc acacagcatc
     2701 tattaacccc gggacagttg ccttttatat gctgtacctc ggtttgataa aatcctatcc
     2761 ggcttacaat tcgtaagcga gattatggca ctctagccac atgagactgt ccgaagtagt
     2821 gtgtaaggat aaccaccctg aaatcaaatc tatgccccca gtattaaaaa aatgcgccga
     2881 tgtgcctcgg ctcgagactg ccttgaccgg accgcttgga cctattgaaa gccagttgct
     2941 ggaatctaag ccggtgattg aggactggtt ccaaactcaa tggcaagaga caccgccgcc
     3001 cttttacgcc tcggtcgatc tgcgcaatgc cggttttaag atcgcgcccg tggacaccaa
     3061 tctatttcct gccggtttca ataacctaaa cccggccttt tggccgcttt gtagtcaagc
     3121 ggtgcattcc aggatcgagc aattgaagta tgggataaga cgcattctgc tggtgcctga
     3181 aagccatacc cggaatctgc tctacctcga gaatgtggcg gtactcaaag cgatcatcga
     3241 gcatgcaggc tttgaggtcc gattgggttc gttgatcccg gatcttaaag cgtctttgga
     3301 tatagccttg ccttccggtc gtcgagtaag actcgaaccg ctggtgcgca gcggtgatca
     3361 cgtaagggtg gccgatttcg acc
//
LOCUS       DASQSL010001926         1019 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_163584, whole genome shotgun sequence.
ACCESSION   DASQSL010001926 DASQSL010000000
VERSION     DASQSL010001926.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163584"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..233)
                     /locus_tag="VE844_19430"
     CDS             complement(<1..233)
                     /locus_tag="VE844_19430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03440.1"
                     /translation="MTKRRFVAACLKEAFRGGWAIANAAASGLVLFGSFAAWRWPELG
                     GDVNFLMWAVPLVLLFLSLYFSSLLGAHKLYERP"
BASE COUNT          232 a          301 c          277 g          209 t
ORIGIN      
        1 ggccgctcat aaagcttgtg cgcgccgagc agcgagctaa aatacaagga caggaacagc
       61 agcaccagcg gcaccgccca catcaagaag ttcacgtcac cacccagctc cggccaccgc
      121 caggccgcga agctgccgaa caaaactagc cctgatgcgg cagcgttggc gatggcccac
      181 ccgccccgga aagcttcctt aagacatgcg gcaacaaaac gtctcttcgt catatgacgt
      241 actcccatta tgtacagccc acgtgcgcga ggcgaggccg ccagcggcgg gcattagact
      301 ttggcctcct tgttagccct cttctttctg ctcagttccc cgaagatggt ttcgttgcgt
      361 tgtttaattt cctcaacgct tcccgctcgt agggccacaa ggaagaacta cacgaagagc
      421 agaaagacgg ccggaggctt gcacccccgg ccggggcaaa gcgggacgag gggaggggat
      481 gttccgctaa gcccaagatg ttttatcggc tacaatttga agtcggaacc agtgactgag
      541 cggtttcgat atcgtatctc atcgcacgtc acggggattt ttttacccgt tagcggttca
      601 tcgcggctgc ccaggggtga gagtggttct cgcggtaaga ttccccttga gcggggagtc
      661 ttacgtggtg tgtgccacag ccagtaactc ccccaagtct cacgcccgct cctcgcgctt
      721 cacttccggc accccctgcc gtagggaaac tatttccaag tacggacagg atagtaggct
      781 gttggcgaaa ttgctgcgaa cggcgtcaca gtttttgaat ttggtcccga cgatttatca
      841 aattcccgta cgaaaaacct accacgaaga cactgcaacg ctggtgtgac cgttttctcg
      901 acgcgaagca gtggaaacaa ctacaggtgg tgattagggc tagccgtcga aatcccagcc
      961 ggtaccgaac tgtccggctc tcccgaaacg cccacgagat tctgaggaag ctggcaatt
//
LOCUS       DASQSL010001927         1287 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_201015, whole genome shotgun sequence.
ACCESSION   DASQSL010001927 DASQSL010000000
VERSION     DASQSL010001927.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1287)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1287
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201015"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            157..690
                     /locus_tag="VE844_19435"
     CDS             157..690
                     /locus_tag="VE844_19435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012934517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4396 domain-containing protein"
                     /protein_id="HZC03441.1"
                     /translation="MDHTTHSIGRSSLNRIAFSATAHCLTGCSIGEVLGMVIGTALGW
                     GNWATVVLAVVLAFVFGYALTLLPLLRAGIAIGTALGLAFASDTLSITIMEIVDNAVM
                     LVIPGAMDAGLTELLFWGSLVFSLVLAGFAAFPANRWLIARGQGHALVHKHHGHHSSD
                     SGVAEKGHSSHQHSSHP"
     gene            771..>1287
                     /locus_tag="VE844_19440"
     CDS             771..>1287
                     /locus_tag="VE844_19440"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HZC03442.1"
                     /translation="MNAFLDELVRNLNSPLSSLILQILVILLVARLCGILVRYLGQPQ
                     VIGEILAGIFLGPSLLKIVAPEVHAFLFPQGSVQRLYFLSQVGILLFMFIVGLELDIK
                     TLRSKARSAVVISQVSIIVPFILGIGLAFLLFAEYGPHDKGALAFALFMGIAMSITAF
                     PVLARIIQEQGL"
BASE COUNT          233 a          385 c          348 g          321 t
ORIGIN      
        1 caagtatctc gtttagacta gtataaatgg gacaagtagc cggtattata attaactgtt
       61 ccggtttgct tgattgcttc atgaggccag ccgctcaatt ccagcgttag gccccttgcg
      121 ttaagcctta cacagattct atcgagagca gtgcaaatgg atcacacaac acatagcatc
      181 ggtcgatctt ccctgaatcg catcgcgttc agcgccaccg ctcattgtct tactggctgt
      241 tcaatcggcg aggtgctcgg gatggtaatc ggtaccgcat tgggctgggg caactgggct
      301 acagtcgtgc tcgcggtcgt gctcgccttt gtgttcggct acgccctgac cctgctgccg
      361 ctgctgcgtg ccggcatagc tatcggcact gcactcgggc tggcctttgc ttcggatacg
      421 ctctccatca cgatcatgga aatcgtcgac aacgccgtga tgcttgtcat ccccggtgcg
      481 atggatgctg gacttacgga actgctgttc tggggcagcc tcgtcttttc gcttgtccta
      541 gcgggattcg ccgcctttcc ggcgaaccgc tggctgattg cccgtggcca ggggcatgca
      601 ctggtacaca aacatcatgg tcaccactca tcagactcag gtgttgccga gaaaggccac
      661 tcatcccacc aacacagctc gcacccttga accgatgtgt actttgacgc ggcctagcta
      721 gtcgctccac tggacgcctt aaaaagcggc gcgccggtcg cggcatctgc atgaacgcgt
      781 tcctcgatga actggtccgc aacctgaact cgcccctcag cagtctgatc ctgcagattc
      841 tggtcatact cctggttgca agattgtgcg gcatcctcgt gcgttacctg ggacagccgc
      901 aagtgatcgg tgagattctg gccggcattt ttcttggccc ctcgctactc aagatcgtgg
      961 ccccggaggt acatgcgttc ctcttcccgc aaggctcggt gcagcggctg tatttcctga
     1021 gccaggtcgg catcctgcta ttcatgttta ttgtcgggct cgagctcgac ataaaaacct
     1081 tgcgctccaa agcccgctcg gcggtcgtca tctcgcaggt cagcatcatc gtacccttca
     1141 tattgggaat cgggctcgcg tttttgcttt tcgcggaata cgggccgcac gacaaggggg
     1201 ccctcgcctt cgcgctcttt atgggtattg cgatgagtat cacggcgttt cccgtgctcg
     1261 cgcgcatcat ccaggagcag gggctca
//
LOCUS       DASQSL010001928         1774 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_201018, whole genome shotgun sequence.
ACCESSION   DASQSL010001928 DASQSL010000000
VERSION     DASQSL010001928.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201018"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(254..445)
                     /locus_tag="VE844_19445"
     CDS             complement(254..445)
                     /locus_tag="VE844_19445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03443.1"
                     /translation="MIEEKEHRYSLHMFDRTNHRPMMSVEISCFGHHCTFPRVILWHA
                     KAKRIAEAVAQILLDAETS"
     gene            complement(841..1179)
                     /locus_tag="VE844_19450"
     CDS             complement(841..1179)
                     /locus_tag="VE844_19450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03444.1"
                     /translation="MGITRLYTGADGQTHIEELDLAAHPELTSLMATKGVVFRTSQPG
                     HFSDWHTAPRRQFVITLEGEVEIGLADGSVHRFGPGHVNLAEDLTGKGHTTRVVGNKP
                     RVTATIHLAD"
     gene            complement(1498..>1774)
                     /locus_tag="VE844_19455"
     CDS             complement(1498..>1774)
                     /locus_tag="VE844_19455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03445.1"
                     /translation="RVTLSLRHSYERVERGRAIAVSRDQEPETDDLLARFLVIGTPDT
                     CIRQIKRMQELVGISHFNCSFWFGDLEHRRVLRSMELFAKEVMPVFK"
BASE COUNT          350 a          505 c          535 g          384 t
ORIGIN      
        1 ttggctcctc cgcgtaagtg tagaagggca gtaaaacgaa ggaaaagctg ctaaagccca
       61 ctataaataa gaaaaagcaa gaaattcaag taacattact aaaatattat tttttgatgc
      121 attttaaggg taacggttta ggggcatagt acggccatgg gtagtgcggc tatttttgga
      181 ggacagaagc tcggcctttt tatgtcgcaa tcgccacttg ggtccatatg gcgatctgcg
      241 ataccgtgcc cttctaggag gtttcagcgt cgagcaatat ctgcgcaacg gcctccgcaa
      301 tacgcttggc tttcgcgtgc cacagaatga ctcgtgggaa ggtgcagtgg tgtccaaagc
      361 aggagatctc aacagacatc atgggccggt ggttcgtacg gtcaaacatg tgcaggctat
      421 agcggtgttc tttctcctcg atcatggcac atcctccgct gcgggtaacg ggtcacgcgt
      481 cgggcaccgc cttcgtgcca gtacaggggc gcctcggtgg gcccctggta agtgccgaag
      541 ccgctggcga gttcttccac ggcttgatct cgcgacgtgg tgcgtgtgag ggctgggtta
      601 agctgctcga ttggcatatg gtcctcgttc gtgtctgcag tcctccgcgc cgtacgtgcc
      661 ctggtgggga ggacacagcc ccacccaggg ggccgcgcgt cgcggctttc tgcgaaccag
      721 tttaggctat tatccggtac tatggtaggc cctgtgagct gcggcctatg tcaggcgcag
      781 cctcacaggg aaaactccgg tcacaccgtc aggggtgtgc agggttggcg gagcccctca
      841 tcagtcggcg aggtggatcg tggcggtcac tcgcggctta ttgccgacga cacgcgtagt
      901 gtgccctttg cccgtcaggt cttctgccag atttacgtga ccggggccga agcggtgcac
      961 gctgccatca gcgaggccga tctccacttc cccctccagc gtaatgacga actgccggcg
     1021 tggagcggtg tgccaatcgc taaaatggcc tggctgcgag gtccgaaaga cgacgccctt
     1081 cgtggccatg agcgaggtca gctcggggtg ggcggctaag tctaattctt cgatgtgcgt
     1141 ttgaccatct gcaccggtgt acaggcgtgt aatccccatg tgggcagctc cttagacaga
     1201 gaaaactccc gcgagtaatg gcgtaattta tgcgtccgaa ctggcgcatg atcctaccag
     1261 atgctcggtt tcgagacaag cgatgctttc gcagccgggt gggcgtcagt gtgttgagcc
     1321 tcgctgctcg tgggcgcata ccccgctttg cccacgaaga cctccccagg ttcgaaggag
     1381 gaggcgctgt gcgtctgcct tcagcgcttt ccactgcggg gctgaagtgc cgccgcaaac
     1441 caacggcgtg cccgtcgatc tccgaaattc cctgcgtgca tgaccccggc agcaggatta
     1501 cttgaatacg ggcatcacct ctttggcgaa cagctccatg gagcgcagca cccgccggtg
     1561 ctccaggtcc ccaaaccaga agctacaatt gaaatggctg atccccacca gctcctgcat
     1621 ccgtttgatt tgacggatac acgtatcggg cgtaccgatg acgaggaagc gcgccagcag
     1681 gtcatcggtc tcaggctctt ggtcgcgcga caccgcaatg gcacggccac gttcaacgcg
     1741 ctcatagctg tggcgcagac tcagcgtcac ccgc
//
LOCUS       DASQSL010001929         1271 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_150704, whole genome shotgun sequence.
ACCESSION   DASQSL010001929 DASQSL010000000
VERSION     DASQSL010001929.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1271
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150704"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..1134)
                     /locus_tag="VE844_19460"
                     /pseudo
     CDS             complement(1..1134)
                     /locus_tag="VE844_19460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611616.1"
                     /note="programmed frameshift; internal stop; incomplete;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          282 a          379 c          322 g          288 t
ORIGIN      
        1 gtggtcgctg ctgccatggc tttgccgtgc cggtagacga ctgccggcgt tcgataatcc
       61 agcgattgat gtaggcgctc atggttgtaa aacgcaaaat agccatccaa gctggtgatt
      121 gattcctgca catcccgata atccttcaaa tacacatcct cgtacttgac actccgccat
      181 agcctttcga caaagatgtt gtcaaaggcg cggccgcgtc catccatact gatctgaatg
      241 ccgtcagcga ataaccggcc tgtaaaggcc tggctcgtga actggctgcc ttggtccgta
      301 ttgaagatcg caggctgtgt cacccggagg gcgcgctcca aagctgagag gcaaaagcta
      361 ctgtccaaag tcaccgagac ttcccacgct catacgtagc ggctgtacca atccatgatg
      421 gccaccaaat agacgaaccc ctgacgaagc cggatatagg taatgtccgc gctccacaca
      481 tggtcagcac tgtcaatcac cacatccttt agcaagtacg gatagatgcg atgttccgcc
      541 gccgcacggc tgacgtgggg cttgggatag atggcttcca ggcccatcaa ccgcagcaat
      601 cgtcgcacgc gtttcgcctt gacctcgtag ccctgctgtt tgagccaagc cgtcatccgc
      661 aacacgccgt aaaagggagt ccgtgtatac tgctcatcca ataagcgcat gaatgcaaga
      721 ttctcggggc tttcctcgac tggttggtag tacagaccag accggctcag cccaagcaac
      781 tggcactgcc gtcgcacgct gatcaactga tgctccggct ccacgaactg gcgtttgacc
      841 tcaagccgag agtccaactt tttttttgag ccagtccaac tcgactttga gttgaccgat
      901 ctgctgggac agctgggcct ttaacgtttc ttcgtcttgt gcctcccgca cgcgtcggct
      961 cgagaaggct tctggtagag cttccagcgc ctgcttcttc cactgcacca cttgatgcgg
     1021 atgcacgccg aaattggcgg caatctcgtt gacggtgtgt tggcctttca tcgcggctca
     1081 cgccactttc gccttgaagt ccacactata acggtttcgc tgcttgggca tcatgcctcc
     1141 tcaccatgcg gcagcgatgt taccacctta acggctggtc caaatttcgg ggagtattat
     1201 acggggccgt taggcagtcc acgagacaag ccactacggc aacacgcaat gagcaaggaa
     1261 acactcaata c
//
LOCUS       DASQSL010001930         1215 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_108287, whole genome shotgun sequence.
ACCESSION   DASQSL010001930 DASQSL010000000
VERSION     DASQSL010001930.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1215
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108287"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(269..892)
                     /gene="rplC"
                     /locus_tag="VE844_19465"
     CDS             complement(269..892)
                     /gene="rplC"
                     /locus_tag="VE844_19465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011955945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HZC03446.1"
                     /translation="MISGLLGRKVGMTQVFMPDGVLVPCTVIEVGPCPVIQMRTREQD
                     GYEAVQIGFLPRARGTNKPLRGHFTKHNAQPLRHLREFKATGEQSLSTGDVLTVDVFT
                     AGEQVDVAGVTKGRGFAGVVKRYGFRGNPGAHGTHETFRGPGSVGSAAHPSHTPKGKR
                     LAGHYGVDRKMVRNLLVVRVEKDRNLLLVKGAVPGSRGGLVEVRRRG"
     gene            complement(916..>1215)
                     /gene="rpsJ"
                     /locus_tag="VE844_19470"
     CDS             complement(916..>1215)
                     /gene="rpsJ"
                     /locus_tag="VE844_19470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012529365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HZC03447.1"
                     /translation="QKIRIRLKAYDHRILDQSVTEIVDTARRTGAKVLGPIPLPTVKN
                     RFTVLRSPHVDKKSREQFELRTHKRLLDILEPTPQTVDALMKLDLSAGVDVEIKL"
BASE COUNT          247 a          380 c          314 g          274 t
ORIGIN      
        1 ctcagcgccg aaggcactgt cagcgacctc gattttccct accgctgccc cctgacgatc
       61 gattacctct aagtccatag aagtcccccg ctcacagacg cagacagctt actcgtcttg
      121 cccgttggca ctcgcgataa cttttctatc gtgcgcttcg gctcatcacg ctcgcgattc
      181 ggaagagagg agaaggtttc ctcgttcccg gccaccaccg accgtgtcta ctgctctcct
      241 gcggtgatca tcatctctga tggcagcgct agccgcgcct gcgcacttcg accaacccac
      301 cacgactgcc aggaactgcc cctttcacga ggaggaggtt gcgatccttc tcgacgcgga
      361 ctaccaggag attgcggacc attttgcgat cgacaccgta atgacccgcg aggcgctttc
      421 ccttcggagt atgcgaggga tgggcggcag accccaccga cccaggaccg cgaaacgttt
      481 cgtgtgtgcc atgggcgccc ggattccctc gaaaaccata gcgcttgacg actcctgcga
      541 aaccgcgccc ctttgtaaca ccggcgacat ctacctgttc tcccgctgta aacacgtcga
      601 cggtcaagac gtcgcctgtc gacagagatt gctcgcctgt ggccttaaat tctcggaggt
      661 ggcgtaaggg ctgcgcatta tgtttggtga agtgcccccg cagcggtttg ttcgtgcccc
      721 tggccctagg cagaaaaccg atctgcacgg cttcgtagcc atcctgctct cgggtgcgca
      781 tctggataac cgggcaaggt ccgacttcga tgactgtgca cgggaccaag accccatccg
      841 gcataaaaac ctgcgtcatg ccaacttttc tacccaacaa cccactgatc atggacgatc
      901 cccatccgct cacgcctata gcttgatttc tacgtcaacc ccagctgaaa gatccagctt
      961 catgagggca tcgaccgttt gcggggttgg ttcgagaata tcgagcaacc gtttgtgggt
     1021 ccgaagttca aattgctcac gcgatttctt gtcgacatgg ggcgagcgca ggacagtgaa
     1081 acggtttttc accgtcggta ggggaatagg acctaacact tttgcgccgg tacgcctcgc
     1141 tgtgtcaacg atctccgtca ccgattggtc gagaatgcga tggtcatatg ccttcaaacg
     1201 aattctgatc ttttg
//
LOCUS       DASQSL010001931         1220 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_53402, whole genome shotgun sequence.
ACCESSION   DASQSL010001931 DASQSL010000000
VERSION     DASQSL010001931.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1220
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53402"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            30..839
                     /locus_tag="VE844_19475"
     CDS             30..839
                     /locus_tag="VE844_19475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018839542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HZC03448.1"
                     /translation="MDPMRRIDQGSPVPYYYQLEQILMEDIEAGHFKSGDRLPSEHEL
                     CATFNVSRTVVRQTLTELEMGGWVQRRKGRGTYVAPRKVPEYLFQNLTGLYEDVAARR
                     GVLRSEVRQLEQIAAPASVAAELEMNEGDPVIVLDRIRFVDELPWVVAITYIPYQLCP
                     QLLDEDMTTQSLYAVLEDKYGIKISYGRRSVEAIRAPAAVARALGIRYGAPSLRLHST
                     SYDENSRPVEHFVAHHRGDLSRFEVYLVRRRGATGPRGVNGVPTMVMRTTN"
     gene            complement(917..>1220)
                     /locus_tag="VE844_19480"
     CDS             complement(917..>1220)
                     /locus_tag="VE844_19480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018843271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aryldialkylphosphatase"
                     /protein_id="HZC03449.1"
                     /translation="AAGAYLGYDGMSRAKYWPDSVLLECLLEVASRGGADRLLIGSDL
                     ARRSAFRPYGGMPGLEYLPRRFIPRLKEAGGESLVHRILAVNPARLLTLGFDKPTT"
BASE COUNT          268 a          340 c          372 g          240 t
ORIGIN      
        1 ttgatgtcgt gatgttatta taggattgca tggatccaat gcggcgcatc gatcagggtt
       61 ctcctgtacc ttattactac caacttgaac agatacttat ggaagatatc gaggcggggc
      121 actttaaatc gggcgatcgg ctaccaagcg aacacgagct ttgcgcaacc ttcaatgtat
      181 cgcgcacggt agtgcgtcaa actttgaccg agctggagat gggaggctgg gtgcaacgcc
      241 ggaaaggtcg cgggacttat gtagccccca ggaaggttcc ggagtacctg ttccaaaacc
      301 taaccggcct gtatgaggat gtcgctgcac gtagaggcgt actccgcagt gaggtgcggc
      361 aactcgagca aatagctgca ccggcctcag tagcagcaga gttagagatg aatgagggtg
      421 atcccgtgat cgtccttgac cggatccggt tcgtcgacga acttccctgg gtggtcgcca
      481 tcacctacat accctaccag ctatgcccac agctgttgga cgaggacatg accacccaat
      541 ccttgtacgc tgtgcttgag gataagtacg gcataaaaat ctcttacggt cggcggtccg
      601 tcgaagcgat cagggccccc gccgcggtgg ctcgagcctt gggaataagg tacggagccc
      661 cgagcttgag gttgcacagc acatcatacg acgaaaacag ccgacccgtc gaacatttcg
      721 tcgcgcacca ccgcggcgac ttaagtcgct ttgaggtcta tttggtgcgc cggcgcggtg
      781 cgacgggacc tcgtggggtc aacggtgtgc cgacgatggt catgcggaca accaactagg
      841 agcactgatc gactgaggcc gtcgtcacga cctgtcgggc gcagcaaggt cttggagctc
      901 cggtaaaaag cgaggactac gtcgtcggct tgtcgaagcc aagggttagc aaccgggcag
      961 ggtttacggc caagatgcga tggacgaggc tctcgcctcc tgcttccttc aaacggggga
     1021 tgaagcgtcg cggcaagtac tccagccccg gcataccccc gtatggtctg aacgcggacc
     1081 ggcgtgctaa gtcgctgccg atcagcaggc ggtcggctcc tccgcgcgag gctacctcaa
     1141 gcaggcattc gagcaagacc gagtccggcc agtattttgc ccgagacatg ccatcgtagc
     1201 cgaggtaggc gccagcggca
//
LOCUS       DASQSL010001932         1224 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_201047, whole genome shotgun sequence.
ACCESSION   DASQSL010001932 DASQSL010000000
VERSION     DASQSL010001932.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201047"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..746)
                     /locus_tag="VE844_19485"
     CDS             complement(<1..746)
                     /locus_tag="VE844_19485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03450.1"
                     /translation="MSIQPAPIDPVPDATIRVARAAFPKGNPYLTLRDQLGVIFHDDD
                     FVDLYPGTGQPGLPPWRLAWVTILQFRETLSDRQAAEAVRARIDWKYFLGLELTDPGF
                     DFSVLSEFRERLLAGRAEERLLDKLLEGCQAHGLIKNRGQQRTDSTHVLAAIRVLNRL
                     ELVGETLRAALNELARVAPEWLQTIAPLAWDDRYSKRIEDSRLPREQSKRDAYAQTVG
                     EDGFALLDALEEDQVPPELRDLPIIDTLRRT"
BASE COUNT          275 a          331 c          355 g          263 t
ORIGIN      
        1 gtgcggcgca gcgtgtcgat gatgggcaag tcccgcagct ctggggggac ttgatcctct
       61 tcaagggcat ctaataaggc aaagccatcc tcgcccaccg tctgggcata ggcgtcgcgt
      121 ttgctctgct cacgcggcag gcggctatcc tcaatgcgct tgctatagcg gtcatcccac
      181 gccaggggcg ctatggtctg aagccactcg ggtgcgacac gggccaactc attaagggcc
      241 gcgcgcagag tttcgccaac gagttccaag cgattgagca cgcgaatggc ggctaacaca
      301 tgggtggaat cggtgcgctg ttgcccccgg ttcttgatca gtccatgagc ttgacagccc
      361 tctaacaact tatccaagag gcgctcttcc gcacggccag ccagcaagcg ctcgcggaac
      421 tcactgagga cggaaaagtc gaaccccgga tcggtcagct ccagacctaa aaagtatttc
      481 caatcgatgc gtgcacgcac cgcttcagcg gcttggcgat ccgagagcgt ttcgcgaaat
      541 tgcaggatcg tcacccacgc caaccgccac ggcggcaggc caggctggcc cgttcctggg
      601 tagagatcaa cgaagtcgtc atcgtgaaag atgacgccca gttgatcgcg tagagtcaga
      661 tacggattgc ctttgggaaa ggccgcacgg gccactcgga tcgttgcatc aggcactgga
      721 tcaataggcg cgggttgaat cgacatggag cacctccgga tcaaagaacg tctcgatgag
      781 cgatgatcgg gtgtagcccc aatgatgcca taaccggccg ctggacggaa caaaatggca
      841 gtggggggga gagcgtcaaa gtcccattta acgctgtctt ggcaggactg aatgtctatt
      901 tctatctgac aatcaaaggg gaagccttaa atgtttgaga cttagccgat tagagtttgc
      961 caacagtatc cgatggtttt ttgagactat ccataagtgt ttgtgtaata gcgagcccat
     1021 tccttggctt ccgcagataa gtgagctgtg gcgtgcgctg cacgacgctg tggtatgatg
     1081 gagcctacct actcccggac agacggtctt tacgcatgaa ggagacgttg tgaccattta
     1141 tcgctggacg cacacccgaa tgtggtgtct ctgctggaga gcaagtatcc tcattgctct
     1201 cgtactcagt atgatattcg cacg
//
LOCUS       DASQSL010001933         1276 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_201052, whole genome shotgun sequence.
ACCESSION   DASQSL010001933 DASQSL010000000
VERSION     DASQSL010001933.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1276
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201052"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(145..717)
                     /locus_tag="VE844_19490"
     CDS             complement(145..717)
                     /locus_tag="VE844_19490"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC03451.1"
                     /translation="MERGALARPEKKAREEGRTIVFVDETGCYLLPLVVKTYAPKGQT
                     PVLRAPLSRDHLSVISGITAHGWLHTRVQDRPFRGKDAARFLKHLTTHISVRLLVIWD
                     GNPIHRCHEVKAFLASPAGQGVHLEQLPPYAPELNPDEGVWNYLKRVELKNVICQHLG
                     QLSYELGKAIKRLRQKPHIIRACVAQAGLV"
     gene            complement(648..1157)
                     /locus_tag="VE844_19495"
     CDS             complement(648..1157)
                     /locus_tag="VE844_19495"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC03452.1"
                     /translation="MTALISQQATNWREGRRLRAWELFHKGWSQHRIAEALGVSKGAV
                     SQWLSRARTQGPQALRHRKPPGRRAKLTHQQWLQLLELLAQGPQDFGFRGDVWTQPRV
                     AQVIRRHFGVQYHPSQVGRILKQYDWSRQKPLRRASQRDEEAIRRWKEERWPALKKRP
                     GRKAGPSSS"
BASE COUNT          242 a          365 c          400 g          269 t
ORIGIN      
        1 aatatctagc cctcaaggtc ggaaccatac ccttgccgga ggagaggtga tgcggactga
       61 cttgtgatta ggattctctg tgatgattaa agacatacga ggaagaaata tggttgccac
      121 aactactgag ccttgaggaa agagctaaac aagaccggcc tgagcgacgc aggcacgaat
      181 gatgtgaggc ttttgcctga gccgcttgat ggccttgcct agctcgtagg atagctggcc
      241 cagatgctga cagatgacat tcttcaactc cactcgcttc aggtagttcc agactccctc
      301 atccgggttc aactcaggag cgtagggcgg caactgctcc aagtggactc cctgcccggc
      361 cgggctggcc agaaaagctt tgacctcatg gcagcgatgg atggggttgc catcccagat
      421 caccagcagc cgcaccgaga tgtgggtggt caggtgcttg aggaaacggg ccgcatcctt
      481 gccccggaag ggacggtctt gcactctggt gtgcagccag ccgtgggcgg taatgccact
      541 aatcaccgac agatggtctc ggctgagggg tgcccgcagc actggagtct ggcccttggg
      601 agcataggtc ttgaccacca ggggcagcag gtagcagccg gtctcgtcta cgaagacgat
      661 ggtccggcct tcctccctgg cctttttttc agggcgggcc agcgctcctc tttccagcgc
      721 cgaatagctt cttcgtcccg ctggctggca cgtctgaggg gcttctggcg gctccagtcg
      781 tactgcttga ggatacggcc tacctgggag gggtggtact ggacaccgaa gtggcgccgg
      841 ataacctggg ccaccctggg ctgggtccag acgtcgccgc gaaagccgaa gtcctgtggt
      901 ccttgggcca agagttccag tagttggagc cattgctggt gggtcaactt ggcccgccga
      961 ccgggaggtt tgcggtggcg cagggcttgg ggtccctggg tcctggcccg gctgagccac
     1021 tggctgacgg cccctttgct cacgcccagg gcttcggcga tgcggtgctg ggaccagcct
     1081 ttgtggaaca gctcccaagc ccgcaggcgg cgtccttccc gccagttggt tgcttgttgg
     1141 gaaattagtg ctgtcataca tcccagtatg ccagccctcc ccccggatgt ttagtcctat
     1201 cttcaaggct cagtagttcg cgtctgtgat cccacgatct atgaaataga agcgcagagc
     1261 gaacaagacg cacagc
//
LOCUS       DASQSL010001934         4337 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_150730, whole genome shotgun sequence.
ACCESSION   DASQSL010001934 DASQSL010000000
VERSION     DASQSL010001934.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4337)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4337)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4337
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150730"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            301..459
                     /locus_tag="VE844_19500"
     CDS             301..459
                     /locus_tag="VE844_19500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03453.1"
                     /translation="MLTMFADFGIRCIEKAKAQEADTLKMILFGWIITLPSAAACSAA
                     SIWLWLSI"
     gene            472..1452
                     /gene="arsS"
                     /locus_tag="VE844_19505"
     CDS             472..1452
                     /gene="arsS"
                     /locus_tag="VE844_19505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018990221.1"
                     /note="Some members of this family are selenoproteins;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenosugar biosynthesis radical SAM
                     (seleno)protein ArsS"
                     /protein_id="HZC03454.1"
                     /translation="MHVTLPLLQPTDFPAIRRRQVETLQVNLGYRCNQTCVHCHVNAG
                     PTRTEEMVLETVDQVIAFLEASGIKTLDVTGGAPELNPHFRYLVGKAHRLGIHVIDRC
                     NLTILWEPGEETLAQFLAEQGVEVTASLPCYLEDNVDRQRGRGVFEKSIRALKRLNDL
                     GYGQADSGLCLNLVYNPQGPTLPPPQAALEADYRRQLKDHYGIVFNHLYVLVNMPILR
                     FGSLLVSKGQFSGYVKLLHEAHRAENLQGVMCRTLLSVDWQGYVYDCDFNQMLGLPLQ
                     LGHRRRLHVSDLVGAELLTGNPIQVADHCYGCTAGQGSSCGGALHPSLST"
     gene            1471..2592
                     /locus_tag="VE844_19510"
     CDS             1471..2592
                     /locus_tag="VE844_19510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020563471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HZC03455.1"
                     /translation="MNMQAMVLERYSKGAKARESELCCPVSYDPELLKRLPQEIIDKD
                     YGCGDPSPYVREGDIVLDLGSGSGKVCYIAAQFAGREGRVIGVDMNEDMLTVARKYQA
                     EMAAKLGGDRVRFVKARIQDLALDLEAVERYLAHQPVQTLTDLERFKEWQATQRREHP
                     LIPAAAVDLVISNCVLNLVDDEDKLPLIREIHRVLRPGGRVAICDIVSDESVPPHMKT
                     DPELWSGCIAGAFQEQEFIARFVETGFLAVGLERWGAAPWRVIEGIEFRSVTLTAVKG
                     LGVPCSDEGHAVIYRGPFASVTDDEGHIFPRGERMAVCERTYRQLLTSGPYRDAFIGI
                     TPSVPRAPVPWCAPPGTRRTPAETKGAAYTSACSSTGCC"
     gene            2867..>4337
                     /locus_tag="VE844_19515"
     CDS             2867..>4337
                     /locus_tag="VE844_19515"
                     /EC_number="1.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018413120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HZC03456.1"
                     /translation="MRKSLCKCWLGIALLVALPAAVQANEELLKLEQDPNYWVMPGGN
                     YWQWRYSELKEINNENADKLQAAWTFSTGVLRGHEGGPLVLPASATGLKGDTLFIHAP
                     FPNNVFAINLDTLEVIWEYVPVQNYDETVPVMCCDTVNRGLAYGDGKIFLQQADTTLV
                     ALDAKTGQKVWAVKNGDPKLGQTNTNAPHVIKDKVTTGISGGEFGVRSWLAAYNIKDG
                     SLAWKAYATGPDSEILFDPEKTTELGKPVGKDSSLKTWLDKDGNPTDQWKIGGASIWG
                     WWAYDKDLNLLYYGTGNPGTWNPVVRPGDNKWSMSIIARDVDTGMAKWVYQMTPHDEW
                     DYDGINEMILADMEVKGKERKALVHFDRNGFAYTLDRVTGELLVAEKYDPAVNWATHV
                     DLKTGLPQRVDKYSTEKNGEDVNTEGICPSALGSKDQQPVAYSPRTGLFYIPGNHVCM
                     NYEPVSGGEYVAGQPYVNAVLTMYPAGKVCPDCPNNNPED"
BASE COUNT          944 a         1201 c         1280 g          912 t
ORIGIN      
        1 gcatatatgg ctgtgtatac gcctaattat taggcatata cattatgcgt ataatacctt
       61 agcgatagtt tccgtagcta agtggcttgt ggtccaacat atccaggtaa gttagggttc
      121 cagccagcac ctggaccttc atggcgcaaa catctcctgt agtaacgcga gaactttcac
      181 ctctccttgg aaaccgcact gcacgattac cgtttgggac agaataatcc cttgcgaggt
      241 ggttttccta tataattgat caggtgttca actctttctc ttaagagagg cagcgcagtt
      301 atgctgacca tgtttgcaga ctttgggatc cgctgcatcg agaaggccaa agcgcaagaa
      361 gccgataccc tcaagatgat cctgttcggc tggatcatca ccctaccctc ggccgctgcc
      421 tgttcggcgg ccagtatctg gctatggctg tccatttagg ttatccagca aatgcatgtc
      481 accttgcctt tacttcagcc tacggatttc cctgcgattc gccgccggca ggtcgagacg
      541 ctccaggtaa acctgggcta ccgctgcaac cagacgtgcg tacattgcca tgtcaacgcc
      601 gggccaacgc ggaccgagga gatggttctc gagaccgtgg atcaagtaat tgcctttctg
      661 gaggcctccg gtatcaaaac cctggatgtg accggtggtg cgcctgaact caacccccat
      721 ttccgttatc tcgtcggcaa ggcacaccgg ctcggtattc acgtgatcga tcgctgtaat
      781 ctgactatct tgtgggaacc gggtgaggag acgctggccc aatttctggc ggagcagggg
      841 gtcgaggtca cggcctcctt gccttgttat ctcgaagata atgtcgatcg gcaacgcggc
      901 cgcggcgtct tcgagaaaag catccgcgcg cttaagcggc tgaacgatct gggctacggc
      961 caagccgact ccggcctgtg cctcaatctg gtctacaatc cccaaggccc gaccttgccg
     1021 cccccacagg ctgccctgga ggcggattac agacggcagc ttaaggacca ctatgggatc
     1081 gtgttcaacc atctctacgt cctggtgaac atgccgattc tgcgctttgg cagcctcttg
     1141 gtctccaagg ggcagtttag cgggtatgtg aagctgctgc acgaggccca tcgcgcagaa
     1201 aacctccagg gtgtgatgtg ccgtaccctc ctcagtgtcg attggcaggg ctatgtctac
     1261 gattgcgact tcaatcagat gctggggctg ccactgcagc tcggccaccg ccgccgattg
     1321 catgtgagcg atcttgtggg tgccgagctt cttacgggta atcccatcca ggtggccgac
     1381 cattgttacg gttgcacggc gggccagggt agcagctgcg gtggcgcgtt acacccgagt
     1441 ttatccacct gaaccacagg agaaatcaac atgaatatgc aggcaatggt actggagcgc
     1501 tactcgaagg gcgccaaagc gcgtgaaagc gaactgtgtt gtccggtgag ctatgatccg
     1561 gaactgctca aacgactgcc ccaggagatc atcgacaagg actacggctg cggcgatccc
     1621 tcgccctatg tccgcgaagg agacatagtg ctggatctcg gcagcggcag cggtaaggtt
     1681 tgctatatcg ccgcgcagtt cgctggtaga gagggccggg tcattggcgt cgatatgaac
     1741 gaggatatgc tcaccgtggc gcggaaatac caggcggaga tggcggcgaa gctcggtggt
     1801 gaccgcgtcc gtttcgtcaa ggcccggatc caggacttgg ccctcgatct cgaggcggtg
     1861 gagcgctatc tcgcgcatca gccggtgcaa acgctcaccg atctcgagcg cttcaaggag
     1921 tggcaggcga cgcaacgccg ggagcatcca ctgatcccgg cggcggcggt ggatctcgtg
     1981 atctccaact gtgtgctcaa cctggtggac gatgaggaca agctgccgtt gatccgtgag
     2041 atccatcgcg tgttaagacc aggcggacgg gtggcgatct gcgatatcgt cagcgacgag
     2101 tcagtgccgc cgcacatgaa gacggatccc gagctctgga gtggctgcat cgccggggcc
     2161 ttccaagagc aggagttcat cgcgcgcttt gttgagaccg gttttcttgc ggtcggcctc
     2221 gagcgctggg gtgctgcgcc gtggcgcgtc atcgagggca tcgaatttcg ctcggtcacc
     2281 ctgaccgccg tcaagggcct cggagtcccc tgttcggatg aggggcatgc ggtcatctac
     2341 cgcggcccat tcgcttccgt caccgacgac gaggggcata ttttcccgcg cggggaacgt
     2401 atggccgtgt gcgagcgcac ctaccgccaa cttctcacga gcggtcccta ccgggacgcc
     2461 ttcatcggca tcacgccgtc cgtcccgcgg gcgcctgtgc cctggtgcgc cccgcccggg
     2521 actcggcgca cgccggccga gaccaagggc gccgcctata ccagtgcctg cagttccacg
     2581 ggctgctgct gatcgatagt tatctccctc tcccctggcg ggagagggca ggggtgaggg
     2641 ggaaaaatgc tattgatgaa tccacttagt tggttataat tacgcaacat gaataaaaat
     2701 agccagtaag ggccacacgt tttgtatctt agccagacaa cgcgagtggc aggagggata
     2761 ttccatatac ccataaagct ttttcccttg gtgtctttgc gatctcggga tgccggggcc
     2821 gaaaattaaa aaaagagatc gaaatactca acttgaggag aaggtcatga gaaaatcttt
     2881 gtgtaagtgc tggctaggga tagcccttct agtggcgctg ccagctgcgg tccaggccaa
     2941 cgaagagcta ttgaagctgg agcaagatcc caattattgg gtgatgccgg gagggaacta
     3001 ctggcaatgg cgctacagcg agctcaagga gatcaataac gagaacgccg ataaacttca
     3061 ggcagcctgg acattctcaa ccggtgtgct acgcggccat gagggcggtc ccttggtatt
     3121 acctgccagc gcgaccggcc ttaaaggcga tacgctgttt atccatgctc cattccctaa
     3181 caacgtgttt gccattaacc tcgataccct cgaggtcata tgggaatacg ttccggtaca
     3241 gaactacgat gagacggtgc cggtgatgtg ctgcgatacc gtcaaccgtg gcttggcgta
     3301 tggggatggt aagatcttcc tgcagcaggc agacactacc ctggtcgcac ttgacgccaa
     3361 gacaggccag aaggtctggg cggtaaagaa cggcgatcct aaactgggcc agacgaatac
     3421 taacgcgccg cacgtcatca aggataaggt caccaccggg atcagtggcg gcgagtttgg
     3481 cgtacggtcc tggctggcgg cctataacat taaagacggc agcctcgcat ggaaggccta
     3541 cgccacggga cccgacagcg agattctatt cgatccagaa aagaccacag agcttggcaa
     3601 gcctgtgggc aaggattcca gcctcaagac ctggctggat aaagacggca accctacgga
     3661 tcaatggaag atcggcggcg ccagtatctg gggttggtgg gcgtatgata aggacttaaa
     3721 cctgctctat tacggcaccg gtaatccggg cacctggaat cctgtggtgc gtccgggcga
     3781 caacaagtgg tcgatgtcga tcatcgcccg cgatgtcgac accggtatgg ccaagtgggt
     3841 ctatcagatg acgccccatg acgagtggga ttacgacggc atcaacgaga tgatcctggc
     3901 cgatatggag gtcaagggca aagagcgaaa ggccctggtc cactttgacc gcaatggttt
     3961 tgcttacacc ctggaccggg tgaccggtga gctcttggtg gccgaaaagt atgatcccgc
     4021 ggtcaactgg gccactcatg tggacctcaa gaccggcctg ccgcaaaggg tcgacaaata
     4081 tagtacggag aagaacggtg aggacgtcaa taccgagggc atctgccctt ctgcgctcgg
     4141 cagcaaggat cagcaacctg tggcctattc accgcgcacg ggcctgttct acatacccgg
     4201 caaccatgta tgtatgaact atgagccggt cagcggcggt gaatatgtag cgggtcagcc
     4261 ctatgtcaat gccgtgctca ccatgtaccc cgcaggcaag gtctgtcctg attgtcccaa
     4321 taataatcca gaggata
//
LOCUS       DASQSL010001935         1430 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_94043, whole genome shotgun sequence.
ACCESSION   DASQSL010001935 DASQSL010000000
VERSION     DASQSL010001935.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1430
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94043"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1308)
                     /locus_tag="VE844_19520"
     CDS             complement(<1..1308)
                     /locus_tag="VE844_19520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006507284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03457.1"
                     /translation="MLPIICVPEIIAKGMECFREVFCRAEGFEHVCRFITGLILSPNK
                     TLQGIYDLQVWEGEAPSRRAMHEAVFESGWDSGALLKEHRTEVARAYQGRGRPVISLD
                     WTLTHHARGPEIYAVTKSYDYVERRTTLFQTVVTAVVSNRDWVDGLEIVVQDPNTLKA
                     EEAYLKATAKESYEQLAEARQRLLELLHYHQHRLEYRKRTEIAVEIVRQLEDEGQFPH
                     VHYAFDNGVLTLELTRLIESRGKHWVSEIEVSRHIQWEGHWRRVDEVAAELRQQHPES
                     FRSVKVSCRNGEEKVFLAFTKVVRLKRYGRKRLVIVHEQADLSDAPRFLLTDAVHWES
                     GRVIQTWSYALASEVFHEFGKQVCGLESAQVRKEEAVIRHFRLNCVAQSLVQRAPAAE
                     SKSERYAFAAGKKTYGQKCRAIGREVLRSLLELSKRYFTEGKSC"
BASE COUNT          316 a          472 c          307 g          335 t
ORIGIN      
        1 gcaggatttc ccctcggtaa aataccgctt acttagctcc aacagagaac gaagtacttc
       61 ccgaccaatc gctcgacact tctgaccgta ggttttcttc ccggcggcaa acgcatatct
      121 ttcggatttc gactctgcgg caggtgcgcg ttgaaccaag gactgcgcta cgcaattcaa
      181 gcggaagtgg cgtatgaccg cttcctcctt gcgtacctga gctgattcca agccacatac
      241 ctgcttgccg aactcatgaa agacctcgga agcgagagcg taactccagg tctggatcac
      301 gcgcccgctc tcccaatgca ccgcatcggt gagcaaaaat cgcggggcgt cgcttaaatc
      361 cgcttgttca tgaacgatta ccaagcgctt gcgtccatac cgcttcaacc gcaccacctt
      421 ggtaaaggcc aagaacacct tctcctcacc attgcggcag ctcaccttca ccgaccggaa
      481 gctctccggg tgctgttgcc gtaactcagc cgccacctcg tccacacgcc gccagtgccc
      541 ctcccactgg atatggcgcg agacttctat ctcactaacc caatgcttac cgcggctctc
      601 aatcaaacgc gtcaattcca acgtcaatac cccattatca aaggcgtaat gcacgtgtgg
      661 aaactgccct tcatcttcga gctggcgcac gatctccacg gcaatctccg tccgtttgcg
      721 gtactccaac cgatgttggt ggtagtgtaa tagctcgagc aatcgttgcc gcgcttcagc
      781 tagctgctca tagctttctt tggcggtcgc tttcaaatag gcctcctccg ctttcaaggt
      841 gttcgggtcc tggaccacaa tctccagacc atcaacccaa tctcggttag acaccaccgc
      901 cgtcaccacc gtctgaaaca aggtggtccg ccgctccaca taatcataac tcttggtcac
      961 cgcataaatc tcgggaccac gcgcgtgatg cgtgagcgtc caatcgagcg agatcaccgg
     1021 gcggcctcgc ccttgatagg ctcgcgctac ctctgttcga tgctccttaa gcagcgcccc
     1081 cgaatcccac cctgactcaa agaccgcttc gtgcatggca cggcgactcg gcgcttcccc
     1141 ttcccatact tgcagatcat aaatcccttg gagcgtctta ttggggctga ggatcagacc
     1201 cgtaataaac cgacacacgt gctcaaatcc ttcggcgcga caaaagacct ctctaaaaca
     1261 ctccatcccc ttggcaatga tctcgggcac acaaatgatc ggaagcatgg ctctatttcc
     1321 cttcgtctat ttcacttatt tcactccctt atcttccact atccctctat tctcctcaat
     1381 aaccttccaa gtcgtgtggc taaggtatct aagctgcttg gtcatagctc
//
LOCUS       DASQSL010001936         2904 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_201107, whole genome shotgun sequence.
ACCESSION   DASQSL010001936 DASQSL010000000
VERSION     DASQSL010001936.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2904
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201107"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..735
                     /locus_tag="VE844_19525"
     CDS             133..735
                     /locus_tag="VE844_19525"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HZC03458.1"
                     /translation="MNRGKRVAVIGALWVAADAEPAAGPVELETVTVTATKTEHPTFE
                     VAGSVNVVAAETIEAEQPQNLNDTLKAPPNIELFSGPRRLGEEANIRGFSDERIVTTL
                     DGARQNFSIGHQGRFVLEPDLLKQVEVYRGANSALYGSGALGGVIALTTKDPSDFLEA
                     KEVLGARLKGGFQSVNDEWLGSTPPTGASFHRRFPRGEIS"
     gene            1005..1301
                     /locus_tag="VE844_19530"
     CDS             1005..1301
                     /locus_tag="VE844_19530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03459.1"
                     /translation="MDDTRCRQFFLEPAEPYHRQYEAMRAFFVEGRQLQEIAQQFGYQ
                     ESSLRVMVSQFRNQMKVNDLHPFLFSRGSGGRRGSLVAKYRYVRRPRRSLTAAP"
     gene            1322..2581
                     /locus_tag="VE844_19535"
     CDS             1322..2581
                     /locus_tag="VE844_19535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03460.1"
                     /translation="MRTRVAGLFLFLPLLGRVQFNQLVSKADYPGSKRIPASSAWLSL
                     LALKLLDKERRSHINDFNFDEAIGLFAGLNIPPKKSYATAYSYGAVRDRQQKLLSGWV
                     SALAPLLFPQAKGFALDFHPIPFRGDPTGLEQHYLPKRGKADKAVLSFFAQEQESRVL
                     CYANANLTRRDQAGETMRFVEFWYAITGSDPEWLYFDSKVTRYEELSKLNQRGIRFIT
                     IRRRGAAILRRLQSLPASQWHHAVMDTAHRRHQRIRYVDETVKLPVYDGELRQVAVTG
                     LGREQPTLFLSNNVKESARSLIVRYAGRNRVEDTLGSSVNFFHLDCLASEVRLNVDLD
                     ATLTVLANGCYRWLAKQLRGFETAAPKQLFRKFVETSGSIEIERDRIVVRFDKRSHNP
                     ILREAALDQSNQKIPWLQNLPVVFQYP"
     gene            complement(2530..>2904)
                     /locus_tag="VE844_19540"
     CDS             complement(2530..>2904)
                     /locus_tag="VE844_19540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03461.1"
                     /translation="AVPIDYGIRVFHAPAALGGLLVVVLILSPESLAAARAALANQLQ
                     RSVNLPPEIGAGDYQPDHTIGADDRLHHGTNRHPRTRHRRYDPAAINADFHEGKSINI
                     FRSRAPHGYWKTTGRFCNQGIF"
BASE COUNT          602 a          837 c          860 g          605 t
ORIGIN      
        1 cctgcctcgt cggtttcggg cctcttaaat cgcaaacgat agccagccac ctgaggctac
       61 ccggcctgca aggcagccag cgagcagcgg gcggatcacc gtccgcatta atccttttgg
      121 ggagggctgg ttatgaatcg aggcaagagg gtggcagtga tcggggcgtt atgggtcgcc
      181 gcggacgccg agcctgcagc gggtcccgtt gagctcgaga ccgtcacggt cactgcgacc
      241 aagaccgaac accccacctt cgaggtggcg ggctcggtga acgtggtggc ggccgagacc
      301 atcgaggccg aacaaccgca gaacctcaat gacaccctaa aggcacctcc caacatcgag
      361 ctgttttcag gaccgcgccg cctcggggag gaggccaata tccgcggctt ctccgatgag
      421 cgcatcgtca ccaccctcga cggcgcccgc cagaacttct ccatcggcca ccagggccgg
      481 ttcgtgctcg agccggatct gctcaagcag gtggaggtct accgtggggc caactcagcg
      541 ctctacggca gcggtgccct gggcggggtc atcgcgctga ccaccaaaga ccccagtgat
      601 ttcctggaag cgaaagaggt cctgggggca cggctcaagg gcggcttcca gtcggttaac
      661 gacgaatggc tgggcagcac gccgcctacg ggcgcgagct ttcatcgccg atttccacgg
      721 ggcgaaatct cttaacgttt cgttatggga ttgccctggt tttgccagga aattcggaaa
      781 atttgccact gaaacgttaa tcggtttatt ttgccaagtg tggttttgac caagtgttat
      841 ttgaagatgg cctgatggcg cacggcgcac ctgagcgttt ccgagcctga aacaaggcct
      901 ttttgcccct cttgcctgcg caggccgtca gttaacttct tcatgtgggc tcctcgcgtt
      961 gagtccatgc gccggaaaac cgattaatag tttggaggcc cctgatggat gacacccgct
     1021 gtcgccagtt ctttctcgaa ccggctgagc cctatcatcg ccagtacgaa gcaatgcgcg
     1081 ccttctttgt ggaagggcgg caactgcagg aaatcgctca acaatttggt tatcaagagt
     1141 catcgttgcg cgtgatggtg tctcagttcc gaaatcagat gaaggtcaat gaccttcacc
     1201 cctttttgtt cagccgcgga tcgggcggcc gcaggggcag cctcgtcgcg aagtatcggt
     1261 atgtccggag acctcggcgg tcgctgaccg ccgcaccttg agcctgacgc cggggcgctg
     1321 cgtgcgcacg cgcgtggcgg ggctgtttct cttcctaccc ctacttgggc gtgtgcagtt
     1381 caaccaactg gtgagcaaag ccgattatcc cggttcaaag aggatcccgg cgagcagtgc
     1441 ctggttgagc ttattggcgc tcaagctcct ggacaaagag cgtcgcagtc acatcaacga
     1501 cttcaatttc gacgaagcga tcggactgtt tgctggtctc aacattccgc cgaagaagtc
     1561 atacgcgacc gcatactcct atggagcggt gcgcgaccgg cagcagaagt tgctctccgg
     1621 ttgggttagc gctttggcgc cgttgttatt tccgcaagcc aaggggttcg cgctggactt
     1681 tcatccaatc ccatttcgtg gcgatccgac cggactggag caacactatc tgcccaagcg
     1741 tggcaaagcc gataaagccg tgttgagttt cttcgcccaa gagcaggaga gccgcgtgtt
     1801 gtgttatgcc aacgccaacc tgacgcggcg cgatcaagcg ggcgagacga tgcgcttcgt
     1861 cgagttttgg tacgcgatca caggcagcga tcccgaatgg ctctatttcg attccaaagt
     1921 cactcgctac gaggaacttt cgaagttgaa ccaacgcggc atccggttta tcaccattcg
     1981 gcggcgtggc gcagcgatcc tacgccgctt gcaatcgctg cccgccagcc aatggcacca
     2041 cgctgtgatg gacactgcgc atcggcgtca tcaacgcatc cggtacgttg atgagaccgt
     2101 gaaattgccc gtttacgacg gtgagctacg ccaagtcgct gtcaccgggt tagggcgcga
     2161 gcagccgaca ttatttttgt caaacaacgt caaagagagt gcgcgctcgc tgattgtccg
     2221 ttacgccgga cgcaatcgtg ttgaagacac gctcggcagc agcgtcaact tctttcatct
     2281 cgattgtctg gccagcgaag tgcggctcaa cgttgatctg gatgcgacgc tgaccgttct
     2341 ggccaacggc tgctaccgct ggctggccaa gcaactgcgc ggctttgaaa cggccgcgcc
     2401 gaaacaactc tttcgcaaat tcgtggagac gagcggctca atcgaaattg agcgggatcg
     2461 gatcgtcgta cgctttgaca aacgcagtca caacccaatc ttgcgagaag ccgcgctcga
     2521 ccagtcgaat caaaagattc cctggttgca aaatcttccg gtggtcttcc agtatccgtg
     2581 aggggcacgg gagcgaaaaa tattaattga ttttccttcg tggaaatcgg cgttaatagc
     2641 agcaggatcg tatcgacggt gtcgagtccg aggatgacga tttgtcccgt gatgaagccg
     2701 atcgtcagca ccgatggtat ggtcaggctg atagtcgcca gcgccgatct caggagggag
     2761 attgacggac cgctggagtt ggtttgccag cgcggcacga gctgcggcaa gcgactccgg
     2821 tgacaggatc aataccacca cgagcaagcc acctagcgcc gcgggcgcat gaaagacacg
     2881 aatgccgtag tcgatcggca cagc
//
LOCUS       DASQSL010001937         1930 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_163679, whole genome shotgun sequence.
ACCESSION   DASQSL010001937 DASQSL010000000
VERSION     DASQSL010001937.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1930)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1930)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1930
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163679"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(83..>1930)
                     /locus_tag="VE844_19545"
     CDS             complement(83..>1930)
                     /locus_tag="VE844_19545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013221832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HZC03462.1"
                     /translation="GGAPLILAKGGTPQGDIKPSQAPVPGTRWTVALYGGSPEAQPVA
                     PVSQWSSSVPVVAGIMLAVVLAGGWLFIHRRRRLTNAEYKEMEKTEDTADYQGAVKAF
                     MEGAHPELKHLIPELPEQASHSPPPEPDIYEDTMPHTVPQLIDETPESVKPVAISDSI
                     FRAYDIRGIVGETLTEEVVYQIGRALGSEAHERDQQSLAIARDGRTSSPALSSALQNG
                     LRDSGRDVIDIGVAPTPVLYFATHYLQTGSGVMVTGSHNPSNYNGLKIVLGGQALSGE
                     AITAIRDRIKAGNFTQGTGDLLTTDILSDYIRRITEDIPAALSRSFKVVVDCGNGVPG
                     AVAPQLLRALGHEVIELYCEVDGAFPNHHPDPSQPENLKDLIEMVKGQKADLGLAFDG
                     DGDRLGVVDGMGTIIWPDQQMMLFAKDVLSRNPGQEIIFDVKCSNHLKHFIEAHGGKP
                     TMWKTGHSLIKTKMKESGAPLAGEMSGHIFFKERWYGFDDALYAAARLLEILLKEKST
                     PTAVFAQLPSGIATPELRLAMPEQEHAPFMEALIKKASFEGAEIITVDGLRVDFPDGW
                     GLIRPSNTTPYLILRFEADDQVALNRIQDAFRQLLQAVGGSEHLKKLPF"
BASE COUNT          402 a          552 c          540 g          436 t
ORIGIN      
        1 atagggtagt gcctcggcaa gcacccgcgc gatctcaatc gcttcggcag cctctaagat
       61 cataagagag ggggcggtct agtcaaaacg gtagcttctt gaggtgttca gaaccaccta
      121 ctgcttgtaa cagttggcga aacgcgtctt ggatccgatt caaggccact tgatcatcgg
      181 cctcgaatct caagatcaag tacggagtgg tgttcgaggg gcggatcaga ccccagccat
      241 ctgggaaatc tacccgcagg ccatcgaccg taatgatctc agcgccctcg aaggaggcct
      301 ttttgatcag ggcttccatg aagggagcgt gctcctgttc gggcatggca agccgtaatt
      361 caggggtggc tatgccactg ggcaattggg caaacaccgc cgtgggcgta ctcttttcct
      421 tgagcaggat ctcaagcagt ctcgctgctg cgtagagggc atcatcaaac ccgtaccacc
      481 gctctttgaa gaatatgtgt ccgctcatct cgccagccaa gggagcgccc gattccttca
      541 ttttggtctt gatgagggag tggccggtct tccacatagt gggcttaccg ccatgggcct
      601 caataaaatg tttcaagtgg ttgctgcatt tcacatcgaa gatgatctcc tggcccgggt
      661 tgcgcgacag cacgtccttg gcaaataaca tcatttgctg atcgggccag atgatagtac
      721 ccatgccgtc aacgaccccc agacgatcgc catcgccgtc aaacgccaat cccagatcag
      781 ctttctgtcc cttgaccatc tcgatcaagt ccttgaggtt ttccggctgg ctgggatcgg
      841 ggtgatgatt gggaaacgcg ccatccacct cgcaatagag ttcaatgacc tcatgtccca
      901 gcgcccggag taattggggt gcgactgctc ccggcacgcc attgccacaa tcgaccacta
      961 ccttaaagga tcgactcaag gctgcaggga tatcttcggt gatcctgcgg atataatcgg
     1021 acagaatgtc ggtagtcagt aaatcgcccg tgccttgagt aaaattaccc gctttgatgc
     1081 gatcgcgtat agctgtgatc gcctcgccgg agagggcctg accgcccaag acgatcttga
     1141 gcccgttgta attcgaggga ttatgactcc ctgtgaccat gacgccgctg cccgtttgca
     1201 ggtaatgggt agcgaaatag aggacggggg tgggcgccac gccgatatca atcacgtctc
     1261 gcccgctatc tctaagacca ttctgcaaag cgctcgacag tgctgggctt gaggttctcc
     1321 catcgcgggc gatcgcgagg ctttgctgat cccgctcgtg agcttcgcta ccgagcgccc
     1381 gtccgatctg ataaaccacc tcttcggtca gggtttcacc tacgataccg cggatatcat
     1441 aggcccggaa gatggagtcg gagatcgcga cgggctttac tgattcaggg gtctcatcga
     1501 tcagctgtgg cacagtatgg ggcattgtat cttcatatat gtcgggctct ggaggtggac
     1561 tgtgggaagc ctgctcgggc agttccggga tcaaatgctt aagctctggg tgagcgccct
     1621 ccatgaaggc tttaacagcg ccctggtagt ctgccgtgtc ttcagttttc tccatctcct
     1681 tgtactccgc gttagtcagg cgacgccgac ggtggataaa cagccatccc cctgcaagca
     1741 ccacagccag catgataccg gctaccaccg gcacagagga actccattgc gaaacgggcg
     1801 caactggctg ggcctcgggg gagcctccgt acaatgcaac cgtccaacgg gtgcctggca
     1861 ccggcgcttg gcttggttta atatcgcctt ggggcgtgcc gcccttggcc aatatcagcg
     1921 gcgctccccc
//
LOCUS       DASQSL010001938         1758 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_108391, whole genome shotgun sequence.
ACCESSION   DASQSL010001938 DASQSL010000000
VERSION     DASQSL010001938.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1758
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108391"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..744)
                     /locus_tag="VE844_19550"
     CDS             complement(<1..744)
                     /locus_tag="VE844_19550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013220440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZC03463.1"
                     /translation="MAQYVYTMNRVGKVVPPSRVILRDISLCFFPGAKIGVLGLNGAG
                     KSTLLRIMAGVDKDFDGAAIPQPNISVGYLSQEPQLDPTKDVRGNVAEGMVATQALLD
                     RFNEISLRFAEPMSDEAMNRLLEEQARLQEAIEACGGWELERKLEIAADALRLPPWDA
                     DVARLSGGERRRVALCRLLLSTPDMLLLDEPTNHLDAGSVAWLERYLEKYPGTVIAVT
                     HDRYFLDNVAGWILELDRGYGIPWQGNYSS"
     gene            complement(778..>1758)
                     /gene="mgtE"
                     /locus_tag="VE844_19555"
     CDS             complement(778..>1758)
                     /gene="mgtE"
                     /locus_tag="VE844_19555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HZC03464.1"
                     /translation="RLASILSYPEDTAGGLMNTDTVTVRCEVELDVVIRYLRWRGVLP
                     EKTDSLIVVDRHNTYLGMLPLTTVLTGDPDVTVGEVMTMEPEAIPASLSAHEVAKLFE
                     QRDLLSAPVIDEQGRLLGRVTIDDVVDVIRDQGDHSLMGMAGLSEEEDIFAPVVVSAR
                     RRTTWLGVNLATAFLAASVIGLFEASIQKIVALAVLMPIVASMGGNAGIQTLTLVIRG
                     LALGQVGSANAWKLLYKELAVGCINGLLWACVVGLVAGVWFKDIGIGFIIGLAMIANL
                     VTAALAGTLIPLALKKLDIDPAIASGVFLTAVTDVMGFMAFLGFATLFLI"
BASE COUNT          414 a          547 c          464 g          333 t
ORIGIN      
        1 ggaggaataa tttccctgcc aggggatgcc ataaccccgg tccagctcga ggatccagcc
       61 cgccacgtta tcgagaaaat agcgatcatg ggtcacggcg atgaccgtgc ctgggtactt
      121 ttctagatac cgctcaagcc aggcgacgga tcccgcatcg agatgattgg tcggctcatc
      181 gagcaggagc atgtcagggg ttgagagcag taaacggcac aaagccacgc gccggcgctc
      241 accgcccgag agcctggcca catcggcatc ccagggcggc aatcgcagcg catcggcggc
      301 gatctcgagc ttgcgctcaa gctcccagcc accacaagcc tcgatcgcct cctggagtct
      361 cgcctgttcc tcgagcagcc tattcatcgc ttcatcgctc ataggctcgg cgaagcgcag
      421 gcttatttca ttaaagcgat ctaggagggc ttgagttgca accatgccct ccgccacgtt
      481 gccacgcacg tctttggtcg ggtccagttg cggttcctga gagagatagc cgacgcttat
      541 gtttggctga gggatcgctg cgccgtcgaa gtccttgtcg acacctgcca tgatgcgcag
      601 taaggtggat ttacccgctc cattgagccc caggaccccg atcttggcgc ctgggaaaaa
      661 gcacagtgaa atgtcgcgta agatcacccg actgggtggc actaccttgc ctacgcggtt
      721 catggtatag acgtattgag ccatcgaaaa cctctacaga aatgaataaa agttgaatca
      781 gatcaagaac aaggtcgcaa accccaaaaa ggccataaat cccatgacgt cggttaccgc
      841 tgttaaaaac acaccgctcg cgatggcggg gtcaatatca agttttttca atgccaacgg
      901 gataagtgtg ccggcgagtg ccgccgtgac aagattggcg atcatcgcca ggccaataat
      961 aaaaccaatc cctatatctt tgaaccaaac acccgccacc aggccaacca cacatgccca
     1021 taacaggccg ttgatacagc cgacagccag ctctttgtaa agcagtttcc aggcattggc
     1081 agaacccact tgaccgaggg ccagaccccg aatgaccagg gtcaaagtct ggatcccggc
     1141 attaccgccc atgctggcca ctattggcat cagcaccgcc agggcgacga tcttctggat
     1201 cgaggcttcg aataaaccga tgacggaggc agcgagaaag gccgtggcca ggttgacacc
     1261 tagccaggtg gtgcgacgcc gggcgctgac caccaccggc gcgaatatgt cctcttcctc
     1321 gctcaagccc gccatgccca tcagtgaatg atcaccttga tcccggatga catcgaccac
     1381 atcatcgatc gtgactctcc caagcagcct cccctgctca tcgatcaccg gggccgacag
     1441 cagatcccgc tgttcaaata gcttagccac ctcatgagca gaaaggctcg ccggtatagc
     1501 ctcgggttcc atagtcatga cctcaccgac cgtgacatcg ggatcccccg tcaacacggt
     1561 agtgagtggc agcatcccga ggtacgtgtt gtggcgatcc accacgatca ggctgtcggt
     1621 tttctccggc agcaccccgc gccaccgcag atagcggatc acgacatcca gctccacctc
     1681 acagcgcacg gttacggtat cggtattcat cagaccgccc gcggtatcct ccggatagga
     1741 gaggatcgag gccaaccg
//
LOCUS       DASQSL010001939         2154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_201139, whole genome shotgun sequence.
ACCESSION   DASQSL010001939 DASQSL010000000
VERSION     DASQSL010001939.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2154
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201139"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            135..1058
                     /gene="nikB"
                     /locus_tag="VE844_19560"
     CDS             135..1058
                     /gene="nikB"
                     /locus_tag="VE844_19560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006459305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel ABC transporter permease"
                     /protein_id="HZC03465.1"
                     /translation="MFQFVISRLLTAALVVFGVVCVVFLFIHMIPGDPVEVMLGEAAS
                     PADREALRRALGLDRPLFEQWQNYMCRLVQLDLGTSLHSGQAITHILSERIPATLALT
                     ASGLTVAILIAFPLGIIAAVRRDTRWDQGAMAFAMLGIAIPNFWLGPLLILVFSVGLG
                     WFPVSGMAGLGSLVLPSLTLGTALAAILSRMVRATLIEILQEDYIRTARAKGLDEPAV
                     IGQHALKNAMLSLITVLGLQLGALLGGAVITETVFGWPGLGQLTVEAIQRRDYPVVQA
                     CVLLISLTYVVVNTLSDLAYGWLDPRVRLHS"
     gene            1156..1974
                     /locus_tag="VE844_19565"
     CDS             1156..1974
                     /locus_tag="VE844_19565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005223849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC03466.1"
                     /translation="MNLPTLLPLIVLVVWGSLALVGHWLPIAPDEIVLAKILAPPSWD
                     EWLGYDDLGRSIADRLVIGAQTSFVVAVLVTAVSTALGTLIGVTGAWLGGMWDHGVVR
                     IIDIVLAFPGVLLAIALAGLLGPGIENVVIALIAVGWVGFARLARAQALSVKHREHIQ
                     AAQALGTGSYTIIFRHLLPLITTPIIVEVSFGIAGVVIAEAGLSFLGLGVQPPAASWG
                     SMIRDGTRYMLVAPHMVIAPGLALFLVVLSVNLLGDRIRDKLDVRSRVLVSPSL"
BASE COUNT          372 a          612 c          623 g          547 t
ORIGIN      
        1 taaattgtat aaccgttgca acccttgtaa cctgttccgg attatcacgg ttgtaatagg
       61 ccatggcagc gatgtgacct ctttgcgaac aataaccgtc aatctatcac acttagagcg
      121 tttttgatcc attcatgttt cagtttgtga taagccggct attgacagcc gccttggtag
      181 tgtttggggt ggtatgcgtg gtcttcttgt ttatccatat gatccctggg gatccggtgg
      241 aggtgatgct aggggaagcg gcgagcccag cggatcgtga agcgctgcgc cgcgctttgg
      301 gactggaccg cccactattt gagcaatggc aaaattatat gtgccgcttg gtgcagctcg
      361 atcttggcac ttcattgcat tccggccagg ctatcacgca tatcctctct gaacggatcc
      421 ccgcgacctt ggcgctcacc gcgagtggac tgacggtagc gatcctgatc gctttccccc
      481 tcgggatcat cgctgctgta cgcagagaca cacgctggga tcaaggggcc atggcctttg
      541 ccatgctggg gatagcgatc cccaattttt ggctcggtcc tctgcttatt ctggtgttct
      601 ccgtgggatt aggctggttt ccggtcagcg gcatggccgg attgggctcg ctggtgttgc
      661 cctcgctcac gctcggtacg gcactggccg ctattctctc ccgtatggtt cgtgccacgc
      721 ttatcgagat cctgcaggag gactatatcc gcacggcgcg cgccaagggg ctcgacgagc
      781 cggccgtgat cgggcagcat gccctcaaga acgcgatgtt atccctgatc acggtgcttg
      841 gtttgcagct tggtgcgttg cttggcgggg cggtgatcac cgaaacggta ttcggctggc
      901 ccggcctcgg tcagctcacc gtggaggcca tccagcggcg tgattatccc gtggtgcagg
      961 cctgtgtgct gctcatcagc ctcacttatg tggtggtaaa taccctctcc gatctggcct
     1021 atggctggtt ggacccacgg gtgcgcctac attcatgagt ttacccacct tgctacctca
     1081 ctccttactc ctcacccctc actcctcact cttcacccct cactcttcac ctatcacgaa
     1141 ggtgcgcctg cactcatgaa tctaccaacc ctgctaccct taatagtgct tgtagtgtgg
     1201 ggcagccttg ccctcgtcgg gcattggctg ccgattgcgc ccgatgagat tgtgttggca
     1261 aagatcctcg caccaccgag ctgggacgaa tggctcggct atgatgatct ggggcgctct
     1321 atcgccgatc gcttagtgat aggggcgcag acctcctttg tggtagccgt gttggtgacc
     1381 gctgtctcca ccgcgctagg caccctgatc ggggtgaccg gggcgtggct tggaggtatg
     1441 tgggaccacg gtgtggtgcg tattatcgat attgtccttg cgttccctgg agtattattg
     1501 gccattgccc tggcaggtct cttgggaccg ggcattgaaa acgtagtgat cgcgcttata
     1561 gcggtcggct gggtaggctt tgcccgactg gcgcgggcac aggctttatc ggtcaaacac
     1621 cgtgagcaca ttcaggcagc ccaagcgctt ggaaccggaa gctatacaat catcttccgc
     1681 catctgcttc cgctgatcac caccccgatc atcgtggagg tgagttttgg gatcgcgggt
     1741 gtggtgatcg cggaggccgg gctttcgttt ctaggcctag gcgtgcaacc tcccgctgcc
     1801 tcgtggggca gcatgatccg cgatggcaca cggtatatgc tggtcgcacc gcacatggtc
     1861 attgccccgg gcctcgccct atttctcgtc gtgctatcgg tcaatttgtt aggcgaccgc
     1921 attcgggata agctagatgt acgctccaga gtgttggtat ctccctcgct gtaaatagag
     1981 ccgtaaaggg gtcggagtga tttaagtttg ggtaatgttg gcgaatagga aaaataaagc
     2041 acattttttt ccgccgtgtc acctgtcccc cccggtgcct gtcccgtggg cggcggtctt
     2101 aaataccacg tgctccgcac cgcacgcgca ccgacagagc cacttcgaga ctcg
//
LOCUS       DASQSL010001940         1004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_94069, whole genome shotgun sequence.
ACCESSION   DASQSL010001940 DASQSL010000000
VERSION     DASQSL010001940.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94069"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(780..>1004)
                     /locus_tag="VE844_19570"
     CDS             complement(780..>1004)
                     /locus_tag="VE844_19570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03467.1"
                     /translation="ERHHRADLVTPAQNHPLAFCFRRCHGTHCTPGARPRPAPPTCSL
                     EVVTAESRIRSERGLGSVDDGAAGAITAVV"
BASE COUNT          206 a          313 c          283 g          202 t
ORIGIN      
        1 cgtagaccac tttctcagta gatcgagtag tagaatgttc aaacctcgac tcgacttatc
       61 agatctcacc gtcgaaatcc accgtaccgc caatatcggt cacccacagc tgacggtcaa
      121 cggccatcgt gttgcgtgag cacagggtct gctatctggg gcattcccct cgcgagtacg
      181 tagtcgctag tgatatctac gtagtcccga cccgatcggc ggagttacgg taacgccgat
      241 attgacagta acccagcgca gccagcgctg gacggtaggt cttgcgtgtc agtgaggcag
      301 tgatgccccg ccgtacccga tcttgttgcc atccggatcc cggtaggtcg cagacatcgc
      361 atcatgatca ttggggtgtt ggttgaagtg tagacgctac cccaatcgat gcgggtccag
      421 gcgcagcctg agcccacgag actcctacgc ctcccacggt caaggccaac gtcgggtagg
      481 ggtgagaacc ggcgaagact accgagatat gttcccgtgc tcgcaagctc acgatcaact
      541 acgtgtatca tgttattcgc gtgccgacta ttagcacgag taaaaccacg gtcaacaacg
      601 aggtaccgtg acccgaccgc tcacagggtg cgccctctgg ccgcgtattg ggcgcagtct
      661 tccaagccgg ccatgcgggt tcgattcccg tcgcctgctc cacaccattt atcaggcgaa
      721 ccggcaacca cttctgatcc tagaagggct gccgtctccg ttcttgcatc aacgtgccat
      781 tagaccaccg ccgtgattgc ccctgccgca ccgtcgtcaa cgcttcccag gcctctctcc
      841 gaccggatcc gcgattctgc ggtcacgacc tccagcgaac aggtaggtgg agcgggccgt
      901 ggccgagccc ccggagtaca atgggtgccg tgacagcgtc gaaagcagaa ggccagcggg
      961 tggttctggg ccggcgtgac aagatcagca cgatggtgcc gttc
//
LOCUS       DASQSL010001941         1648 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_201145, whole genome shotgun sequence.
ACCESSION   DASQSL010001941 DASQSL010000000
VERSION     DASQSL010001941.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201145"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..572)
                     /gene="ccmC"
                     /locus_tag="VE844_19575"
     CDS             complement(<1..572)
                     /gene="ccmC"
                     /locus_tag="VE844_19575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017364187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease CcmC"
                     /protein_id="HZC03468.1"
                     /translation="MQLASPKYFYLWSGRWLPWFGWTTVLLTLVGLYWGLVIAPPDYQ
                     QGESYRIIFIHVPSAWMSLFIYAVMAGAGAVALVWRLKLAEVIATASAPIGAAFTFLA
                     LATGSLWGKPMWGTWWVWDARLTSELVLLFLYLGYMALEAAIEDRRTASRAAAVLALV
                     GVVDLPIIHYSVEWWNTLHQGPTVTKLDKPS"
     gene            complement(585..1265)
                     /gene="ccmB"
                     /locus_tag="VE844_19580"
     CDS             complement(585..1265)
                     /gene="ccmB"
                     /locus_tag="VE844_19580"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017364188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HZC03469.1"
                     /translation="MPHGLAYAYGWLIKRDLLQILRHKSDALNPLLFFLMVASLFPLG
                     IGPETATLKRIAPGIIWTAALLATLLSLEAMFRSDFEDGSLEQLILSPHPLAVLVLAK
                     ICAHWLATGLPLFLLAPLLGLQFGLSAEGLGVLMLTLLIGTPALSLVGSVGVALTVGL
                     RRGGLLLALLLLPLYVPILIFATGAVETVGRGLPAEAQIYMLCAFLVLALTLAPLATS
                     AALRIRMG"
     gene            complement(1271..>1648)
                     /gene="ccmA"
                     /locus_tag="VE844_19585"
     CDS             complement(1271..>1648)
                     /gene="ccmA"
                     /locus_tag="VE844_19585"
                     /EC_number="7.6.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015439 - ABC-type heme transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC exporter ATP-binding protein CcmA"
                     /protein_id="HZC03470.1"
                     /translation="ELAYIGHADGIKGDLTVLENLRVAHALHGGGEEPELAIEHLGLV
                     EFRDILSRLLSAGQRRRLALARLLVNKARLWLLDEPFTALDKTAIRTVAGLFEDQAAQ
                     GGMVIYTSHHPVRIAKARRMELA"
BASE COUNT          420 a          502 c          458 g          268 t
ORIGIN      
        1 gaaggtttat ccagcttcgt gaccgtcggt ccttgatgca gggtattcca ccattccacg
       61 gagtaatgaa tgatcggcag atccactacc cccaccaggg ccagcactgc tgctgctcgg
      121 ctcgcggtac gccggtcctc aatcgccgct tccagggcca tataaccgag gtacaaaaac
      181 aataacacga gctcggaggt caaccgggcg tcccacaccc accacgtgcc ccacatgggt
      241 ttcccccaga gtgagccggt ggctaaggcc agaaaggtga aggccgcccc aatcggggcg
      301 ctggccgtgg caatcacctc ggcgagcttc aaacgccaca ccagcgccac cgcccctgcc
      361 cccgccatca ctgcatagat aaagagcgac atccaggcac tcggtacgtg aatgaagatg
      421 atccggtagc tttcaccctg ttgataatcg gggggggcga tcaccagtcc ccaataaagg
      481 ccaacgaggg tcaacaagac cgtggtccag ccgaaccacg gcagccagcg gccagaccag
      541 aggtagaagt atttcggcga tgccagttgc ataagaattt aacctcaacc catacggatg
      601 cgcaaagccg cagatgtagc taagggggcg agcgtaagcg ccaggaccaa aaacgcgcag
      661 agcatataga tctgcgcctc agccggtaga ccgcgcccga ccgtttccac cgccccggtg
      721 gcgaagatca ggataggcac ataaagcggc agcaacaata aagcgagcaa tagaccgccg
      781 cgtctgaggc cgaccgtcaa ggctaccccc accgaaccaa ccaggctcaa ggccggggtt
      841 ccgatcaaaa gggtcagcat cagcaccccc agtccctcag ccgagagacc aaattggagg
      901 ccgagcagcg gcgcaagcaa gaacagcggc agaccggttg cgagccagtg ggcgcagatc
      961 ttggccagca ccagaaccgc taacggatga gggctcagga tcagctgttc cagactccca
     1021 tcctcaaaat cggagcggaa catcgcctca agcgataaga gcgtggcgag caaggcagcg
     1081 gtccagatga tcccgggtgc gatccgcttg agcgtcgctg tctcagggcc tataccaagc
     1141 gggaagaggc ttgccaccat aagaaagaac aacaggggat taagcgcatc actcttatgg
     1201 cgtaatatct gcaagaggtc gcgcttgata agccagccat acgcataagc caacccatgg
     1261 ggcataaaga tcaagccagt tccatgcgac gggccttggc gatgcggacc ggatgatggc
     1321 tggtatagat caccatgcct ccctgagccg cctggtcctc gaataatccg gcgaccgttc
     1381 taatagctgt tttgtccagg gcagtaaagg gttcatccaa aagccataag cgggctttat
     1441 tcacgagcag acgtgcaagc gcaagccggc gccgttgacc tgctgagaga agccggctca
     1501 ggatatcgcg aaactcgact aaaccgaggt gctcgatggc cagttcaggt tcttcgccac
     1561 caccatgcaa ggcatgggct actcgcaggt tttccaaaac cgtcaaatcg cccttgatcc
     1621 catcggcatg gcctatatag gccagttc
//
LOCUS       DASQSL010001942         3881 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_201149, whole genome shotgun sequence.
ACCESSION   DASQSL010001942 DASQSL010000000
VERSION     DASQSL010001942.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3881)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3881)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3881
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201149"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1219
                     /locus_tag="VE844_19590"
     CDS             <1..1219
                     /locus_tag="VE844_19590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013033268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZC03471.1"
                     /translation="KAALQGTHTLKEQLEQAKLEFENARRAGDLTRMSELQYGRIPEL
                     TKQLEGAIQRETQPMKLLRDKVTEEEIAEVVSRWTGIPVAKMLEGEREKLLHMEAALH
                     RRVIGQEQAVQAVADAIRRARAGLSDPRRPYGSFLFLGPTGVGKTELCKALAEFLFDT
                     EEALIRIDMSEYMEKHTVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAH
                     PEVFNILLQVLDDGRLTDGHGRTVDLRNTVVVMTSNLGSQFIQEMAGEENYAAMKKAV
                     METVAHSFRPEFINRIDEVVVFHSLEQEQIRAIAELQIEQLKRRLRDQNIDLRVSRQA
                     LDKLTQAGFDPVYGARPLKRSIQTHLESPLARELLAGQFGPGDTVSVEVHGEDWCFTL
                     SQPPHNPRGVLTL"
     gene            complement(1453..2703)
                     /locus_tag="VE844_19595"
     CDS             complement(1453..2703)
                     /locus_tag="VE844_19595"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_function: GO:0070968 - pyrroloquinoline quinone binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HZC03472.1"
                     /translation="MLRSGYANPQCGLPGSVSPLETLERLSQMARMIRSVYHAFALVY
                     LFMAACGQPPPGKGEGEIGTSQGGSSGAVQFRVETVASGLEVPWTIAFTPDGRVLFTE
                     RPGRVRVVENGSLRPAPLATIEDVEQTGESGLMGLTLHPHFAQNRFIYVAYAYRGDGQ
                     RVRVVRFRETGDAVTDRKVIIEDIPAARFHAGTRARFGPDGKLYITTGDATQREQAQQ
                     LDSLAGKTLRLNDDGSLPPDNPFVNRQGARPEVWSYGHRNSQGIAWQPGSGLQFQTEH
                     GPSGFDGPGGGDEVNIVEKAKNYGWPTVHHEQSHEGMESPILLYTPAIAPASAMFYSS
                     SAFPQFRGNFLFGNLKGECIIRVVLDGRRVVSQERLLEGKYGRIREVAEGPDGAIYFS
                     TSNRDRRGSPAQVDDRILRLVPAK"
     gene            complement(2747..3739)
                     /locus_tag="VE844_19600"
     CDS             complement(2747..3739)
                     /locus_tag="VE844_19600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019943355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZC03473.1"
                     /translation="MGIGLAMGSTAAIAQDEPPGYSTALGIAMESYAYPYPVQYLSLE
                     IEGQQARMAYMDVRASGGSATARAVVLLHGKNFYGSYWGNTIKALTSAGFRVIIPDQI
                     GFGKSAKPDINYSFDLLASNTARLLDHVKVEKAAIVGHSMGGMLAVRFVRNYPDRVTH
                     LILENPIGLEDYRFKVPPQPTEKLYQNELSETDPAKIRAFYRRYVVEWKPEIYERFVE
                     ARSRIALGGEYPRWAKAAALTYQMIYQQPVRHEFGLIKAPTLLVIGQEDRTTIGRGFV
                     SEEVLGTLGQYPQLGRAAAQDIPNARLVGLERVGHIPHLEAPERFHQALLDFLK"
BASE COUNT          797 a         1141 c         1139 g          804 t
ORIGIN      
        1 gaaagcggcc ctgcaaggca cccatacctt gaaggagcag ttggagcagg ccaagctcga
       61 gttcgagaac gcccggcgtg caggcgatct cacgcggatg tccgagcttc aatacgggcg
      121 cataccggag ctgacaaaac agctcgaagg cgcgattcag cgggagacgc agccgatgaa
      181 actgttgcgc gacaaggtca ccgaagagga gatcgcggag gtggtgtcca gatggaccgg
      241 gatcccggtc gcgaagatgc tcgaaggtga gcgggagaag ctgttgcaca tggaagcggc
      301 gctgcaccgg cgcgtcatcg gtcaggagca ggcggtgcag gcggtagcgg acgccatccg
      361 ccgggcccgt gcggggctct ccgacccccg gcgtccgtat ggctcttttc tgttcctggg
      421 acctacgggc gtgggcaaga ccgagctttg caaggcctta gccgagttcc tgttcgacac
      481 cgaagaggcc ctgatccgta tcgacatgtc cgagtacatg gagaaacata ccgtcgcccg
      541 cctcatcggt gctccgcccg gctatgtcgg ttacgaggag ggcggctatc tgaccgaggc
      601 tgtgcgccgc aagccctatt ccgtagtgct gctcgatgaa gtggaaaagg cccatcccga
      661 ggtcttcaat atcctgctcc aggttctgga tgacgggcgg ctcaccgacg gccacgggcg
      721 caccgtggat cttcgcaaca ccgtggtggt gatgacctcg aacttgggat cccaatttat
      781 ccaggagatg gccggtgagg agaactatgc ggccatgaag aaggcggtga tggagaccgt
      841 ggcgcactct ttccgaccgg agtttatcaa ccggatcgat gaggtggtgg tgtttcattc
      901 gctagagcaa gaacagatcc gcgcgatcgc cgagcttcag atcgagcagc tcaagcgccg
      961 actgcgcgat cagaacatcg atctcagggt ttctcgccag gcccttgata aactgaccca
     1021 ggccggattt gacccggtgt acggcgcgcg tcccttgaag cggtcgatcc agacgcatct
     1081 tgagtcccct ctagcccggg aattgttggc cggtcagttt ggcccgggag atactgtcag
     1141 cgtcgaggta cacggcgagg actggtgttt cacactgtcc caacctcctc ataacccgcg
     1201 tggcgtcctc actttatagc gccgatacac ctcgccgaac gtgcgctcaa gatagctttc
     1261 aaccccacgt gccgcgtaac cgaacggaac cagtgccgaa tgcctttggg cagatatcag
     1321 ggctgttaaa ttctcaaatg cccttgagcg cgaggaggtg atcgagtgag agggcatttc
     1381 gatagattgc ctcactaacg ttggtcacgc gattggagtg taggacattt ccactcataa
     1441 agaatcccgg ttctatttag cgggcaccag gcggagaatg cggtcgtcga cttgcgcagg
     1501 gcttccgcgc ctgtcgcggt tcgacgtgga aaagtagatc gccccatccg ggccttcggc
     1561 cacttcccgt atgcgcccgt acttgccttc cagcaaccgc tcctgactga cgacgcgcct
     1621 gccatccagt acaacgcgga tgatgcattc gcctttcagg ttcccgaaaa gaaagttgcc
     1681 gcgaaactgc ggaaaagccg agctactgta aaacatggcg ctcgcagggg cgatagccgg
     1741 agtgtagagc aggatgggcg actccatacc ttcatgcgat tgctcatggt ggactgtggg
     1801 ccacccatag ttcttagctt tctcgacgat attgacttca tccccgccgc ccggcccatc
     1861 gaaaccagaa gggccatgct ctgtctgaaa ctgcaagccg gagccgggtt gccaagcaat
     1921 gccctgtgaa ttgcggtgtc cgtaagacca gacttcggga cgcgcgccct gccggttcac
     1981 aaacgggttg tcgggcggga ggcttccgtc atcgttaagc cggagggtct ttccggcaag
     2041 tgagtccaac tgttgcgcct gctcgcgctg cgtcgcatcg ccggttgtga tgtagagttt
     2101 gccgtcaggg ccaaatcgtg cgcgggtgcc tgcgtggaag cgcgcagcgg ggatgtcctc
     2161 gatgatcacc tttcgatctg tgacggcgtc gcccgtctcg cggaagcgca cgacgcggac
     2221 acgctgcccg tcgccgcggt atgcgtacgc gacatatatg aagcggttct gcgcaaaatg
     2281 cgggtgcagg gtgaggccca tcaagccgct ttcacccgtc tgctccacgt cttcgatagt
     2341 ggcgagcggc gcgggccgga ggcttccatt ctcaaccaca cggactctgc ccggtcgctc
     2401 cgtgaaaagt acgcgtccgt cgggcgtgaa tgcgatggtc cacgggacct caagtccgct
     2461 cgccacagtc tcgacgcgaa actgaaccgc gccacttgac ccgccctgcg aggtcccgat
     2521 ttctccttct cctttgccgg gcggaggctg accgcacgct gccataaaca gataaactaa
     2581 ggcgaaagcg tggtaaacac tgcgtatcat tcgagccatt tgtgaaagcc tttccaatgt
     2641 ttcgagcggg cttaccgaac cgggcaagcc acattgcggg ttagcgtagc cagaccgtaa
     2701 catcgataag agtctcgtcg catgaacacc tctttagacc gcgttatcac ttcaagaagt
     2761 cgagcaatgc ttgatggaag cgctcaggcg cttccaaatg cggtatgtgt cccacgcgtt
     2821 caagcccgac cagcctggcg tttggaatgt cctgcgcagc agcccggccc aactggggat
     2881 actgtccgag ggttcctaat acttcctctg acacaaagcc tcgcccgata gtcgtgcggt
     2941 cttcctgtcc tatcacaagc agcgtcgggg ctttaatcaa gccgaattcg tgcctgaccg
     3001 gctgctggta aatcatctga tacgtcaagg ctgctgcctt cgcccagcgt gggtactcgc
     3061 cgccgagcgc gatgcgcgag cgcgcttcca caaacctctc gtagatttcg ggcttccatt
     3121 cgacaacata acgccggtag aaagcgcgta tctttgccgg gtcagtttcg ctcagctcat
     3181 tctggtaaag cttttcggtc ggctgaggcg gcaccttgaa tcggtaatcc tccagcccga
     3241 tgggattttc cagtatcaag tgagtgactc tatccgggta gttgcgaaca aagcgcacgg
     3301 cgagcatccc gcccatcgaa tggcccacga tagccgcctt ttctactttg acatgatcta
     3361 gcagtcgcgc agtattggat gccaaaaggt caaagctgta attgatgtcc ggctttgcgg
     3421 attttccaaa gccgatctgg tcgggaatga tgacgcgaaa gcccgcgcta gttagcgcct
     3481 tgatggtgtt cccccagtag ctcccataaa agttcttacc atgcagaagc actaccgccc
     3541 gcgccgtggc ggaaccgccc gaagctcgca catccatgta agccatccgc gcctgctggc
     3601 cttctatttc aagcgagaga tactgaaccg ggtaagggta agcatacgat tccatcgcta
     3661 tgccgagggc cgttgagtaa ccgggtggct cgtcttgtgc tatagccgca gtcgatccca
     3721 tcgctaaacc gatgcccatt attggcagcc acagtatgac ccgcagaaag gaaagaattc
     3781 ggtccgatcg gttattcatc attgttccac cttcaggctt ggcaccgagc gctcaagttt
     3841 ctacccgtga ttgtacgggc gggcgcatct gcgccggcac g
//
LOCUS       DASQSL010001943         5020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_108398, whole genome shotgun sequence.
ACCESSION   DASQSL010001943 DASQSL010000000
VERSION     DASQSL010001943.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 5020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5020
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108398"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1794
                     /locus_tag="VE844_19605"
     CDS             <1..1794
                     /locus_tag="VE844_19605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002616575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZC03474.1"
                     /translation="PTQALQLKHMLDRHGYRAAIANNGREALTRLHQCVASEPQGRGR
                     QAQDAHLPRKPLMVISDIVMPEMDGYELCRSIKADEQLADIPVILLTSLSDPKDVFKG
                     LECGADNFIVKPYDEPFLLSRIRFILANQQLRQVERAQMGLEIFFAGQRYFITSDRLQ
                     ILNLLLSTYEAAVQKNLEVCKARDELQQLNEQLEAKVAERTATLAAEIAERKRSEERL
                     REAEARYRALVETTPAITYSADLTEEVSMLYVSPQTETLLGFSAEEWRLDPARWVKQL
                     HPEDRPRVLKAFERTRTEGVPFKIEYRLLTRDGTPRWFHDHGLVVNDATRNRRFIYGT
                     LADVTELKQAEAEIRRLNEELEQRVRERTAQLETTNQELEAFSYSVSHDLRTPLRHID
                     GFASLLKDHIGSTLDDKGHGYFERISRAATQMGQLIDDLLAFSRMGRAEMHRTQLSLE
                     RLVREVLADLQDETRGRDIVWRIAPLPEVRGDPFMLRLVLSNLMANAVKYTQPRARAE
                     IDISCATNESEIVFCIRDNGVGFDMRYVDRLFGVFQRLHSASEFEGTGIGLANVRRII
                     HRHGGRTWAEGKVDGGAAFYFSLPDRKEPTV"
     gene            complement(1858..2697)
                     /locus_tag="VE844_19610"
     CDS             complement(1858..2697)
                     /locus_tag="VE844_19610"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HZC03475.1"
                     /translation="MVLLVLAAFAAEYAGISGLVSPESVVAAPDGRVFVSQIGEFGKD
                     GDGSVAAVDIRGRNAGGEFTVFAKGMDDPKGIDLWNGTLYVADKTKIWRVDGQGVAGV
                     WIKESDFPRKPLFLNDVAIDRQGNLYVSDLGEIMEGKGKGVIYRVSQDGKVAQIIGEE
                     DDPAIKNPNGLLADGDDHLLVLDFTTGALLRIALKTKAVEKLADGFGGGDGIARDRAG
                     MLYLSDWKGGKLWKYDYAQKGAKPQPYPASFQAAADIALDPEQRYILVPDMKAGRLVP
                     IAK"
     gene            complement(2754..2939)
                     /gene="ssrS"
                     /locus_tag="VE844_19615"
     ncRNA           complement(2754..2939)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="VE844_19615"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(2948..3271)
                     /locus_tag="VE844_19620"
     CDS             complement(2948..3271)
                     /locus_tag="VE844_19620"
                     /inference="COORDINATES: protein motif:HMM:NF017016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HZC03476.1"
                     /translation="MNTIGDEAKPINVSILDKEYTVACDEKDRESLFATVKYLNMKMQ
                     QLRDSGKIIGAERIAVITALNIAHEYLEYRNQKERSTASIDASIQRIHDKIVNSLTKD
                     RQAEI"
     gene            complement(3268..3492)
                     /locus_tag="VE844_19625"
     CDS             complement(3268..3492)
                     /locus_tag="VE844_19625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015280135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02449 family protein"
                     /protein_id="HZC03477.1"
                     /translation="MSEKESEGLNLAALEARVDELIRTMEQLSAENEALRAQQAALTM
                     ERATLIEKTELARSRIEAMIMRLKSMEIHS"
     gene            3699..5018
                     /gene="pepP"
                     /locus_tag="VE844_19630"
     CDS             3699..5018
                     /gene="pepP"
                     /locus_tag="VE844_19630"
                     /EC_number="3.4.11.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004269115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro aminopeptidase"
                     /protein_id="HZC03478.1"
                     /translation="MEKREFTRRRKRLMERMEGNSIAILPASPLRRRNGDVDFPYRPD
                     SDFYYLTGFPEPEAVAALIPGRAQGEYILFCRERDPEKEIWHGRRAGLEGACARYRAD
                     DAFPISDIGDIVPGLMENRERVFYTLGCDPDFDQQMIAWVNQVRRRSRTGVAAPDTFI
                     TVGHLLHEMRLYKNHPELKAIRRAVAISAAAHKRAMQICRAGIREYQLEAELLHEFTA
                     GGSRAPAYPPIVGSGANSCILHYTDNSDLLKEGDVVLIDAGAEFEGYASDITRTFPVN
                     GQFSPAQRAVYEIVLAAQLAAIDKMVPGNHWNDPHEAAIRVLTRGLIDLGILKGKLSR
                     LIKDEAYKPYFMHRTGHWLGMDVHDVGHYKIEGEWRLLEPGMVMTVEPGLYFQAETKG
                     LAKKWWNIGVRIEDDILITPEGNEVLSAEVPKTVPEIESLMVRVRAV"
BASE COUNT         1119 a         1443 c         1402 g         1056 t
ORIGIN      
        1 cctacccagg cattacagct caagcatatg cttgatcggc acggctaccg cgccgccatc
       61 gccaacaacg gcagagaagc tcttaccagg ctccatcaat gcgtagcatc ggagccacag
      121 ggacgtggcc ggcaagcgca ggatgcgcat cttccgcgca agccgctgat ggtgatcagc
      181 gacatcgtca tgccagagat ggacggctat gagctctgcc ggagcatcaa ggcggatgag
      241 cagctcgccg acatcccggt gatactgctg acctccctgt ctgacccaaa ggatgttttc
      301 aaaggactgg agtgtggggc ggataacttc atcgtgaagc cctacgatga accgttcctg
      361 ctctcccgca tccggttcat cctggccaac cagcagttac gtcaggtgga aagggcacaa
      421 atgggcctgg agatcttctt tgcggggcaa aggtatttca tcacctcgga ccgcctgcag
      481 atcctgaacc tcttgctttc cacctacgaa gctgcggtcc agaagaatct tgaggtctgc
      541 aaggcccggg atgaattgca gcagctgaac gagcaactgg aagccaaggt ggcggagaga
      601 accgccaccc tcgcggccga gattgccgag cgcaagcggt cggaagagcg tttgcgtgaa
      661 gcagaggctc gctaccgcgc cctggtagag accacaccgg ccatcaccta cagcgctgac
      721 ttgaccgaag aggtcagcat gttgtacgtc agcccccaga ccgagaccct gcttggcttc
      781 agcgcggagg agtggaggct ggatccggcg cgctgggtga aacagttgca tcccgaagac
      841 cggcctcgcg tgctcaaggc gtttgagcgc acccgtaccg agggcgtgcc attcaagatt
      901 gaataccgtc tgctgacacg tgacggcaca ccacgatggt tccacgatca tggcctggtg
      961 gtcaatgatg cgacgcggaa caggcgcttt atctatggga ccctggcgga cgttaccgaa
     1021 ctcaagcagg cggaagcgga gatccgaaga ctcaacgagg aattggaaca gcgcgtccgc
     1081 gagcgcaccg ctcaactcga aaccaccaac caagagcttg aggcgttcag ctactccgta
     1141 tcccacgatc tgcggacgcc gttgcgccat atcgacgggt ttgccagcct gctgaaagat
     1201 cacattggat ccaccctcga tgataagggg cacggctatt ttgagagaat ctcgcgggcg
     1261 gcgacccaga tgggtcaatt gatcgacgac ctgctcgcat tctccaggat ggggcgcgcg
     1321 gagatgcaca ggacccagct gagcctggag cggctggtcc gggaggtgct ggcggatctg
     1381 caagacgaga cgcggggacg cgatatcgtc tggcgcatcg cgcccttgcc cgaggtccgg
     1441 ggggatccct tcatgctgcg cctcgtgctg tccaacctca tggccaatgc cgtcaagtac
     1501 acgcagcccc gcgcccgggc cgagatcgat attagctgcg ccaccaatga gagtgagatt
     1561 gtcttctgca ttcgcgacaa tggggtgggg tttgatatgc ggtatgtgga caggctgttc
     1621 ggcgtgttcc agcgcctgca cagcgccagc gagttcgaag gtactggcat tgggctcgcc
     1681 aacgtgcggc gcatcatcca ccgccacggc ggccgcactt gggcggaagg aaaagtggat
     1741 ggtggtgcgg ctttttactt ttcactgcct gacagaaagg aacccacggt ataaggctaa
     1801 atcctgatct ccctagggtg atgaaccacc aggatccaat cgcttcgctt gaacagatca
     1861 tttcgcaatc ggaaccaacc ggccggcctt catgtctggg accaatatat agcgctgttc
     1921 gggatcgagg gcaatgtctg cggctgcctg gaagctcgcc gggtatggct gtggcttggc
     1981 gcctttctgc gcatagtcgt atttccatag ctttccgccc ttccagtcgg aaaggtaaag
     2041 catacccgct cgatcgcgcg cgataccatc gccaccgcca aagccatcgg ccagcttttc
     2101 gaccgccttg gtcttcagtg caatacgcag aagcgcgccc gtggtgaaat cgagcaccag
     2161 cagatgatca tcgccatccg cgagtagacc gttgggattt ttgatagccg gatcatcttc
     2221 ctcgccgatg atctgcgcga ccttgccatc ctggctaacc ctatagatca cccccttgcc
     2281 tttcccctcc atgatctcgc ccaagtccga gacataaaga ttgccttggc ggtcaatcgc
     2341 aacatcattc aagaacaggg gctttcgtgg aaagtcactc tccttaatcc agacgccggc
     2401 tacgccctgc ccatcgactc gccagatctt ggtcttatcg gccacataca gggttccgtt
     2461 ccaaagatcg atccccttgg gatcgtccat gcccttggcg aacaccgtaa actcaccgcc
     2521 cgcattccgg ccgcggatat cgaccgccgc taccgagcca tctccgtctt ttccaaactc
     2581 gccgatctgg gagacgaaca ctcgaccgtc cggggcggcc actaccgatt cgggtgagac
     2641 gaggcccgag atcccagcgt actctgcggc aaaggcggca agtactagta ataccaaacc
     2701 tattgaagca atcttgcgta gcatctcgag tatagccccc cgattagaat aaggcattct
     2761 ccgcaacgcc gctacggctt atcacttgaa cccagggttc aagagcggaa catcacgagg
     2821 cgactcaggc ttgccgctgc atggcggccc tgctcactgt cacctacaga tccgttcctt
     2881 gggtatgaaa atataggctc aagagtgacc tcaaccgctg gcgcgcgcca cagagaatgc
     2941 caaaacccta aatctcagct tgcctatctt tagtcaagct attaactatc ttatcatgga
     3001 tccgttggat acttgcatct atactcgccg tagaacgttc tttctgattt ctgtattcta
     3061 aatattcatg agcgatgttg agcgccgtta taacagcaat acgctcggca ccgatgatct
     3121 tgccgctatc acggagctgc tgcatcttca tattcagata ttttaccgtt gcaaacagtg
     3181 attcgcgatc cttttcatca caagccacgg tatattcctt gtccaggatc gaaacgttga
     3241 tcggcttagc ttcatcacca atagtattca tgaatggatt tccatcgatt tgagccgcat
     3301 aatcatagcc tcgatgcgag agcgcgccag ttccgtcttt tcaatcaagg tcgcccgctc
     3361 catggtgagc gcagcctgct gcgcgcgcag ggcttcattc tcggcactca gctgttccat
     3421 ggtgcggata agctcatcca cccgggcctc caatgcggca aggttaagac cttcactctc
     3481 tttttcactc ataaggcacc caggggtata cgatctttag ccatctagaa tatagagcga
     3541 ccgcttatga gggtcaacag cattcgaatt atactgttga ccgaggcgaa ttcagcgtgt
     3601 agaaaataag atacctgctt ttctagacat tttattccac gtacacgtat atagataaac
     3661 ataagggctt catggagccc gatgggtcga ggacacaaat ggaaaagaga gaatttacgc
     3721 gacggcgcaa gcgactgatg gaacgtatgg aaggaaatag catcgctatt ctacctgcat
     3781 ccccgctgcg ccgccgcaat ggggatgtcg attttcctta ccggccggac agcgattttt
     3841 attaccttac cggattcccg gagcccgagg cggtagcggc gctgatcccc ggccgtgctc
     3901 agggcgagta catcttattc tgccgggagc gggacccgga gaaggagatc tggcatggcc
     3961 gtcgcgccgg ccttgaaggc gcctgcgcaa gatacagagc cgatgatgcc ttccctatct
     4021 cggatattgg cgatatcgtc ccgggcctta tggaaaatcg cgagcgggta ttctacaccc
     4081 tgggctgcga tccagacttc gaccaacaga tgatcgcctg ggtcaatcag gtgaggaggc
     4141 gctcgcggac aggagtagcc gcccccgata ccttcattac cgtcggtcat ctgttgcatg
     4201 agatgcggct gtataagaat cacccggagc tcaaggccat acgccgagca gtggccatct
     4261 cggcggcagc gcacaaacgg gcgatgcaga tctgtcgagc ggggatcagg gaataccagt
     4321 tagaagccga gctgctccac gaattcacgg cgggcggcag ccgcgcaccg gcctatcctc
     4381 ctatcgttgg cagcggtgcg aacagttgta tcctccatta caccgataac agcgaccttc
     4441 tgaaggaggg tgatgtggtg ctcatcgatg cgggcgcgga gtttgagggt tatgccagcg
     4501 atattacccg gaccttcccg gtcaatgggc agtttagccc ggctcagcga gcggtctatg
     4561 agattgtgct ggctgcccaa ctggccgcca ttgacaagat ggtgccgggg aatcactgga
     4621 atgatcctca tgaagcggcg atccgcgtct taacgcgggg actcatcgat ctcgggatcc
     4681 tcaagggcaa gctcagccgc ttgatcaagg acgaggctta caaaccttac tttatgcacc
     4741 gcacgggcca ttggctgggc atggatgttc acgatgtagg ccattacaaa atagagggcg
     4801 agtggcggct gctggaaccg gggatggtca tgaccgtcga gcccggactc tatttccagg
     4861 ccgagaccaa gggtctcgcc aaaaagtggt ggaatatcgg ggtgcgtatc gaagacgata
     4921 tcctgataac cccggaaggt aacgaggtct taagcgctga ggtaccgaag acggtccccg
     4981 aaatcgaatc cttgatggtc cgtgtccgtg ccgtctgagt
//
LOCUS       DASQSL010001944         1065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_38147, whole genome shotgun sequence.
ACCESSION   DASQSL010001944 DASQSL010000000
VERSION     DASQSL010001944.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38147"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(48..215)
                     /locus_tag="VE844_19635"
     CDS             complement(48..215)
                     /locus_tag="VE844_19635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03479.1"
                     /translation="MMKTYHVRVFVPQDIEIRAEDDAQALAKVGQLYQEYYAKVLRGW
                     IEPLEEPQDLE"
     gene            457..621
                     /locus_tag="VE844_19640"
     CDS             457..621
                     /locus_tag="VE844_19640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03480.1"
                     /translation="MSTANSLVKCQQEKRRVEGGNFFLPGQAGRRAGQSSADHRPASR
                     LAWVAVAGDT"
BASE COUNT          227 a          329 c          296 g          213 t
ORIGIN      
        1 ctcccctgct cttggttggg acgcgtccca accaatcggc agagaaacta ctcgagatcc
       61 tgcggctctt cgagtggttc aatccagccc cggagcactt tggcgtagta ctcctggtag
      121 agctggccaa ctttcgccag cgcttgcgca tcatcctcag cccggatctc aatgtcctgc
      181 gggacaaaca cgcgcacgtg gtaggttttc atcatgctca cctcctttct gccagtcagg
      241 ttgggtgtct tctggcaatt tgccgaatgg ctagcagaat ttgcgggtca aggcaaaacg
      301 ccgcagcgtt ttccgcagcg tagcgaaggc tgccttgacg catagcaaat ttgccagctc
      361 caccatgaga aggccagaag acacccggtg gggagtcctc gcgcgctcca cgtgcatacg
      421 gagagcatcc cgaagggata cgctagagac caccgcatga gcacagcgaa ttccttggtg
      481 aaatgccagc aggaaaaaag gcgggttgaa ggggggaatt ttttcctgcc gggtcaggca
      541 ggtcgtcgag caggacagtc cagtgcggat caccggccag cgtcgcggct ggcatgggtc
      601 gccgtcgcgg gcgacacata ggtgagccgc acgggaaggg ttcgagcgct gcgtaaataa
      661 ccacagacat ggggggtagt caggcgcgtt tcaaggccgg gaagccttgc gcgaagcgtg
      721 cgcctgacta ccccccgttg ggatctgtcg cctgaccatt tttctgataa catccgccac
      781 cttagccccc tttccacacc ccttgcggat accctgattg aaccgggtta agtgaaaaac
      841 agacgagtcg caaccctagg cgcagagaat ccactattgc gactcctatt gcgactatat
      901 ttgcacctcc cctgacaatg atccctggca ttgccacccg gcaggactcg cacgcacgcg
      961 gcatgtcgct tacattccct tttcccctcc ctactcgacc atgcgcccgc tggccaatcg
     1021 aggaggtata accggcggcc gcgaaccact gctccgaaac accat
//
LOCUS       DASQSL010001945         1693 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_201163, whole genome shotgun sequence.
ACCESSION   DASQSL010001945 DASQSL010000000
VERSION     DASQSL010001945.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1693
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201163"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..588)
                     /locus_tag="VE844_19645"
     CDS             complement(<1..588)
                     /locus_tag="VE844_19645"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HZC03481.1"
                     /translation="MEKKDPIIIVGAGRTGTTVFHRMLSEHPHLAWLPGRICAKFPER
                     LELSRLFLKGLDYPVVGELLKRRIQPGESYPFWEHHCKGFSAPYRDLVAADVTNRTKK
                     HIPRTMAKILTEKRNRLLLKITGWPRIGFLSEVFEDARFIHVMRDGRAVANSMLNVRF
                     WQGWKGTWDWGWGELSPAQKQEWNDHDQSFVVLAAI"
     gene            complement(649..>1693)
                     /locus_tag="VE844_19650"
     CDS             complement(649..>1693)
                     /locus_tag="VE844_19650"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HZC03482.1"
                     /translation="KVLKITGLGRSGSTILDVVLGNHPDIESVGEASNLIRNGWISRE
                     SLRGIDPKTLRVPICTCGKRLDVLYVDSADEACPFWASVRREWLERADGESIESYPRL
                     QNDFELKRRWPRLLYERRRPSAPLRSYARLTRTFFESIRAVSGKPVIVDSSKSPARAL
                     ALGMVPGIDLYVVHLVRDGRGVVTSLRKTFKKDVQAGIMWDHEGRPMWKTAVRWIVLN
                     LTSVVRWIVLNLASEWICTQLGPKRTMRLRYEDFVADPKGALERIGSLIELDLRDVAD
                     AASSGKPMQAGHNIGGNRTKKSGTITLRPDAQEWRTALSPTEQLLSWMSMRSLLRRDM
                     AISESISDMDGLC"
BASE COUNT          346 a          503 c          430 g          414 t
ORIGIN      
        1 aatagccgcg agaacgacga acgattgatc atggtcgttc cactcttgtt tttgggctgg
       61 cgatagttcg ccccaccccc agtcccatgt ccctttccag ccctgccaaa agcggacgtt
      121 tagcatagaa ttagctacag ctcttccatc tctcatcaca tggatgaatc tcgcgtcctc
      181 gaacacctct gagaggaagc cgatccttgg ccatccagtg attttgagta gcaagcgatt
      241 tcttttttcg gttagtatct tcgccatcgt gcgcgggatg tgcttcttgg ttctgtttgt
      301 tacatcagct gctacgaggt ccctgtaagg tgcgctgaag cctttacaat gatgctccca
      361 gaatggataa ctctctcccg gttgtattct tcgcttaaga agctcgccta ctaccggata
      421 gtcaagcccc ttcaagaaga gcctactcag ttctaacctt tcgggaaatt tcgcgcatat
      481 ccttccaggc agccaagcca ggtggggatg ttcagagagc atacgatgga agacggtagt
      541 accggttctt ccggctccaa ctatgataat gggatccttc ttctccatag taaaggcact
      601 taacctctca gggtacgcgc tgctgcctca agagtccata tgctattgtc agcatagccc
      661 gtccatatcc gagatgctct cacttatagc catatctcgg cgcaagagcg atctcatcga
      721 catccatgaa agtagttgct ccgtagggga gagggcggtc ctccattcct gtgcgtccgg
      781 tcgtagcgtt atggtgccag actttttcgt cctgttgccg ccgatgttgt gcccggcctg
      841 catcggtttg cccgaagagg cggcatctgc gacgtctctc aggtcgagct cgatcaggga
      901 accgatcctt tccaacgcac ccttggggtc tgccacgaaa tcctcgtagc gcagacgcat
      961 cgttctcttg gggccgagct gggtgcaaat ccactccgat gccaggttca ggactatcca
     1021 acgcacgacc gatgtcaggt tcaggactat ccaacgcacg gctgtcttcc acatagggcg
     1081 accttcgtgg tcccacatga tgccggcctg cacatctttc ttgaaggttt ttctaagaga
     1141 cgttactact cctctgccgt cgcgtaccag gtggaccacg tacaggtcta tcccgggtac
     1201 catcccaaga gccaacgcac gtgccggtga tttggaagag tcgacgatga cgggtttccc
     1261 gctcaccgcg cgtatggatt cgaagaacgt acgcgtcaac ctggcgtacg accgcaatgg
     1321 ggcagacggt ctgcgcctct cgtacagcaa gcgtggccat cgtctcttga gctcgaaatc
     1381 gttctgaagt ctcgggtagc tttcgatgct ctctccatcg gcgcgctcta gccactcacg
     1441 ccgtacgctg gcccagaacg ggcaggcctc atcagcagag tcgacataga gaacatcaag
     1501 ccgtttaccg caggtgcaga tcggaacgcg cagcgtcttc gggtcgatcc ctcgcagcga
     1561 ctctcggctg atccagccgt tacggatcag attacttgcc tcgcctacgc tctcgatgtc
     1621 gggatggttc ccgagcacca cgtcgagtat cgtggagcca ctacgtccca agcccgttat
     1681 cttcagaacc ttc
//
LOCUS       DASQSL010001946         1403 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_53506, whole genome shotgun sequence.
ACCESSION   DASQSL010001946 DASQSL010000000
VERSION     DASQSL010001946.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1403
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53506"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            267..1145
                     /locus_tag="VE844_19655"
     CDS             267..1145
                     /locus_tag="VE844_19655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014686488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZC03483.1"
                     /translation="MRRPYLTDISDAEWTHLKDHLPTPKAPGRPRVHTLREILNAIFY
                     IVRSGCAWRLLPHDFPPWRTVYHYFRAWRLDGTWERMHAALRQRVRICLKRNPQPSAA
                     IVDSQSIKTTGVGGKERGYDGGKKVKGRKRHLLVDTQGLVLEARVHSAKVQDREGIKL
                     LLGLAQDRLPQRLSHLWMDAGYTGEGKGADWAEKVLGWTAEIVRHPPKLAPEEVMRRW
                     VREWAKEGVAIDAEEFSGPRRFRDLPRRWVVERTFSWLSQNRRMSKDYERLPESSEAL
                     VYVAMSRLMVRRLANS"
BASE COUNT          306 a          388 c          423 g          286 t
ORIGIN      
        1 ccccactacc cctagaatca cctgctccag acacccacag agcctcggcc cgctagggct
       61 tgtaacaccg atggatagat atgcggggct ctggatgtct cccaccagga acaaatgttt
      121 gtagtacctg attttcagtt actacacttc ccctccccag cgccctttag gggatgcggg
      181 tggggctatg ctgagtttcc gagaagacct cttcgaaact gtctgaaaag gggtagtccg
      241 gtgtcgatgc cgctactcta gcatgcatga gaagaccgta cttaaccgac atttccgacg
      301 ccgagtggac acatctcaag gatcatctcc ctactcccaa agctcctgga cggcccagag
      361 tacacacctt gcgtgagatc cttaacgcca tcttctacat cgttcgcagc ggatgtgctt
      421 ggcggcttct gccacacgac ttcccaccat ggcgcaccgt ctaccactat ttcagagctt
      481 ggcggctgga tggaacgtgg gaaaggatgc acgccgcttt gcgccagcga gtgcggatat
      541 gcctcaagag aaaccctcag cccagcgcag cgatagtgga tagccagtcg atcaagacaa
      601 caggtgtagg aggaaaagag cgcggctacg acggcgggaa gaaggtcaaa ggcagaaagc
      661 ggcatctctt ggtagacacc cagggtttgg tgctcgaagc cagggttcac agcgcaaagg
      721 tccaggaccg ggaaggcatc aagctcttgt tgggactcgc gcaggatcgt ctgccccagc
      781 gcctctctca cttgtggatg gacgcgggct acaccggaga aggcaagggt gcagactggg
      841 cggagaaggt actgggctgg acggcagaga tagtgcgcca ccctccgaag ctggcaccgg
      901 aggaggtaat gaggaggtgg gtgagggagt gggccaaaga gggagttgcg atcgatgcgg
      961 aggagttctc agggccgcgt aggttcaggg atctgcctcg gcggtgggtg gtggagcgga
     1021 ccttttcctg gctctctcaa aaccgacgga tgagcaaaga ctatgagcgg ctgcccgaga
     1081 gctccgaggc gctcgtctac gtagcgatga gccgcttgat ggtgaggcgt ttggctaact
     1141 cttgaggctt ttcagacagt ttcttgacgg agttctcgga agttcacgaa gaagattcat
     1201 cgtggattca tcgtcgccgt ttagggtgca taccgggcgg ggcaccacaa aacttcccct
     1261 ttctaccttc cctaccccgc ccctagagct tatgtacccg attgcgtgga acagggattc
     1321 tgcgaagttc gccaagatat tttcgtatct agcccatttg tgcgggatgc gccctcggag
     1381 acgcccagcc accgcgcggc ctc
//
LOCUS       DASQSL010001947         1029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_201171, whole genome shotgun sequence.
ACCESSION   DASQSL010001947 DASQSL010000000
VERSION     DASQSL010001947.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201171"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..424)
                     /locus_tag="VE844_19660"
     CDS             complement(<1..424)
                     /locus_tag="VE844_19660"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03484.1"
                     /translation="MGYSGYKHQKGEKIIAITDHHGYVLAPVPVAPVNETDMVLLPQG
                     LHALKQIAREVGLDLRGAYLNLDGGFDSTHNRKCMFNAGMIPNIPENTRNRKYTKRGR
                     KRLFNAAIHALRMHVERTFAWEDKFKRLLLRFERIQQRH"
     gene            complement(373..816)
                     /locus_tag="VE844_19665"
     CDS             complement(373..816)
                     /locus_tag="VE844_19665"
                     /inference="COORDINATES: protein motif:HMM:NF024736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03485.1"
                     /translation="MRSITAAKPATMPIPVQLSETEFTAFILPHLSMPKRGPKCKLGY
                     HRVFNLILWLLYTGMQWKCLPVPKDPNGKPAIHYTTVYKVFARWAEDGSLWQAFGASV
                     QHLAAAQHLDMRVLHGDGTNTVAKKGGMASGTRGTNTRRGRKSSR"
BASE COUNT          217 a          284 c          291 g          237 t
ORIGIN      
        1 agtgccgctg ctggatacgt tcaaatcgta gcagcaaccg cttgaacttg tcttcccacg
       61 caaaggtccg ctcgacatgc attcgtaaag cgtggatagc tgcgttgaac aaccgtttgc
      121 gcccgcgctt ggtgtacttc ctgttgcggg tgttctctgg gatattggga atcatgccgg
      181 cattgaacat gcacttgcga ttgtgtgtgg aatcaaagcc gccatcgagg ttgaggtacg
      241 cccctctcag gtccaaccca acctccctgg ctatctgctt caaggcgtgc agaccctggg
      301 gaaggagcac catatccgtt tcattgacgg gagccacggg gacgggcgct aagacatagc
      361 catgatggtc cgttatcgcg atgattttct cccccttctg gtgtttgtac cccgagtacc
      421 cgatgccatc cccccttttt tggcgacggt attggtcccg tcgccatgga gcacgcgcat
      481 atcgaggtgt tgcgctgctg caaggtgctg cacactggca ccaaacgcct gccagagtga
      541 cccgtcctcg gcccatctgg caaagacttt gtagacggtc gtatagtgaa tggccggttt
      601 cccattgggg tctttcggca caggcaagca cttccactgc atccccgtgt agaggagcca
      661 taagatgagg ttaaatacgc gatgatagcc caatttgcac ttcggcccac gcttgggcat
      721 cgagaggtgc ggtaagataa atgcggtgaa ctcggtttcg gagagttgga cggggatcgg
      781 catcgttgca ggctttgctg ccgttatgct cctcacgcaa gggcctcatg taaagaatat
      841 tgccgcgcac tcgaaaatca aagtgcttca tatcctacaa gaggttggga gcatttgcaa
      901 aactcgcaac cacttagttc gttacgtgag agcagatgac aggcactgcc caccagggcc
      961 tgagcgacag cgacgatcgc acggttcttt ccccgtcgcc aggccaagcg ctgatccagg
     1021 gcggagagg
//
LOCUS       DASQSL010001948         2267 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_108427, whole genome shotgun sequence.
ACCESSION   DASQSL010001948 DASQSL010000000
VERSION     DASQSL010001948.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2267
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108427"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(196..1494)
                     /gene="ltrA"
                     /locus_tag="VE844_19670"
     CDS             complement(196..1494)
                     /gene="ltrA"
                     /locus_tag="VE844_19670"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZC03486.1"
                     /translation="MRSPTVTTKLQRLAEQANHNPERVFTNLAHLIDVDFLREAYRRT
                     SKSSAAGIDGVTAKLYAEHLDDNLHDLHDRLRRGRYQAAPVVRVWIEKEDGGQRPIGK
                     PAFEEKIVQRAVAMLLEAIYEQDFSDSSYGFRPGRSPHQALHALRTHCMEEGIGWIVD
                     ADVSGYFDSIDRTRLREVLRRRVNDGRIMRLIGKWLRAGVMEEGVLHHPETGVVQGGV
                     ISPVLANIFLHHVLDEWFEREVQPRLKGRSFLTRFADDWIMGCELETDAQRLMAVLPK
                     RFGRFGLSLHPEKTVLIRFRKPTTRKGSGDGNGTFDFLGLTHYWTRSRRGYWVIHRRT
                     ARKRLRRTKKALWRWCRANRHLPLKDQYWKLCQKLRGHFQYYGIRGNYRLLSKVRRHA
                     EKAWRYWLSRRSHKSAISWEKFQKLKAVFGLPIPKIVHQI"
BASE COUNT          443 a          716 c          567 g          541 t
ORIGIN      
        1 aattcgatat atccaatgaa cagatttgga gtataaattt gcatgaaact cctattttgg
       61 tttccgggta aaggcaccag ttacccggcg ccctccccac agatccgtac gtgaacaatt
      121 cgctcatacg gctcctcggt aaccagagtt ccggcacacc tctagcgcat cactatgcta
      181 cccggcaagg ccacttcaga tctggtggac gattttgggt ataggcaggc caaacaccgc
      241 cttgagcttc tggaatttct cccagctgat cgcactctta tggctgcggc gactgagcca
      301 gtaccgccag gctttctccg catgtcgtcg gacttttgac aacaagcggt agttccctcg
      361 aattccatag tactggaagt ggccccgtaa cttctggcac aacttccagt attggtcttt
      421 caggggcaga tggcgattgg cccgacacca tcgccacagg gcctttttcg tgcgacgtag
      481 acgcttacgg gccgtcctgc ggtgaatcac ccaataacct cggcgcgatc gggtccagta
      541 atgggtcaat ccgagaaagt caaatgtgcc gttcccatct cccgatccct tgcgggtcgt
      601 cggttttctg aacctgatca acaccgtctt ctcaggatgg aggctcaagc caaagcggcc
      661 aaaccgcttc gggaggacgg ccatcagtcg ttgggcatct gtttccagct cgcatcccat
      721 gatccaatca tcagcgaagc gcgtcagaaa gcttcggccc ttcaaccgag gttgcacctc
      781 acgctcaaac cactcatcca agacatgatg caggaatata tttgccaaca ccggtgaaat
      841 gactccgcct tgaacgacgc cagtttccgg gtggtgtaac accccctctt ccatgacgcc
      901 agctcgtagc catttcccga tcaggcgcat gatacgccca tcgttgaccc gtcggcgcaa
      961 cacctcacgc agacgagttc tgtcgatgct gtcgaagtat ccactcacat ctgcatccac
     1021 aatccagccg atcccctctt ccatgcagtg cgtacgcaaa gcgtgcaatg cctggtgagg
     1081 gctgcgacct ggccggaagc cataggagct gtcggaaaag tcctgctcat aaatcgcttc
     1141 gagcaacatg gccaccgctc tttggacaat tttttcctca aacgccggct ttccgatcgg
     1201 gcgctgcccc ccgtcttctt tctcgatcca gacccgcacg actggcgccg cctgataccg
     1261 tccacgtcgt agacggtcgt gtaagtcgtg caggttgtcg tcgaggtgct cggcatacaa
     1321 cttcgccgtc accccgtcga tgcccgccgc acttgactta gacgttcggc ggtacgcctc
     1381 gcgcaggaag tcgacatcga tcagatgagc caggttggta aacacccgct cgggattgtg
     1441 gttggcttgc tctgcaaggc gctgaagttt cgtggtgacg gttggtgatc tcaaggtatc
     1501 tcccatcttt cccctcagct ccgcgtgatg cccggtttcg ccttccctct agtgggtcgc
     1561 ttgggcctca cttccccacc ttcatcggta ctatgctcca ctaagactgc caccatgccc
     1621 gtctcgggtc gcttcgcttg tcactcgctt cccgatacct tgctggcttc agtgcgttcg
     1681 tggtgtcccc agcgggctca cgatcgggtc gaagcgcccc aatcatgcca gggcctttgg
     1741 tcgcccggtc ccccagtccg ggaattaagc aaggaggcag agggctctcc caagttcccg
     1801 agttacccct gtagatacat gccccgctct cagaccccgg tggggtccca ttgactcgcc
     1861 aatacgtctc tgggactgtt gccttccagc gcaaagagac tgtcggcttt cccctctcga
     1921 cgtctcgagg gatatccgat tgcccacaac cctaactatt tcggggctcc atcacgcggc
     1981 ctgtatcctt gatccttcca gcctcgtacg cccattgctg ggtttgcacg tggagttcac
     2041 taccgactgg ctggctaggc tttagtcggg tgggacttga gcgggttccg ctctcaccca
     2101 ctgggtaaca acaacccatt tcatgagatt tctcccagtc ccaaggtttc gggcttactt
     2161 ggcacgactt cgccatgttt gaggccagag ctaagtcttt ccgcagtagc ccattatacg
     2221 ctttcgacgg ttgtgttcat ttcgaaaacc gtacgccatg cgctgaa
//
LOCUS       DASQSL010001949         1112 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_163732, whole genome shotgun sequence.
ACCESSION   DASQSL010001949 DASQSL010000000
VERSION     DASQSL010001949.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163732"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1112
                     /locus_tag="VE844_19675"
     rRNA            <1..>1112
                     /locus_tag="VE844_19675"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          253 a          275 c          363 g          221 t
ORIGIN      
        1 gaacgatgct gaaggaactc ggcaatttac ctccgtaact tcgggataag gaggccttgg
       61 gcttgggcaa ccaggttcga ggggcacaga ccagggggtg gcgactgttt acctaaaaca
      121 cagggctctg cgaagtcgag aagacgacgt atagggtctg acgcctgccc ggtgccggaa
      181 ggttaagagg agaggtgcaa gccttgaatc gaagccccgg taaacggcgg ccgtaactat
      241 aacggtccta aggtagcgaa attccttgtc gggtaagttc cgacctgcac gaatggcgta
      301 acgacttccc cgctgtctcc agcatcggct cagtgaaatt gaagtccccg tgaagatgcg
      361 gggttcctgc ggtcagacgg aaagaccccg tgcaccttta ctgtagcttt gcgctggcat
      421 tcgtgttggc atgtgtagga taggtggtag gcaaagaagc ccgggcgcca gcctgggtgg
      481 agccgccctt gaaataccac ccttgtagac atggatgtct aaccgcgatc cttgatcagg
      541 gtccgggacc gcgcatggca ggcagtttga ctggggcggt cgcctcccaa agagtaacgg
      601 aggcgcgcga aggtgggctc agagcggtcg gaaatcgctc gttgagtgca atggcataag
      661 cctgcctgac tgcgagactg acaagtcgag cagagacgaa agtcggtcat agtgatccgg
      721 tggtcccgcg tggaagggcc atcgctcaac ggataaaagg tacgccgggg ataacaggct
      781 gatgatctcc aagagtccat atcgacgaga tcgtttggca cctcgatgtc gactcatcac
      841 atcctggggc tggagcaggt cccaagggtt cggctgttcg ccgattaaag tggtacgtga
      901 gttgggttca gaacgtcgcg agacagttcg gtccctatct gccgtgggtg tcggagaatt
      961 gagaggatct gtccctagta cgagaggacc gggatggacg gatctctggt ggacctgttg
     1021 tggcgccagc cgcattgcag ggtagctata tccggacggg ataaccgctg aaggcatcta
     1081 agcgggaaac ccacctgaaa acgagtgttc cc
//
LOCUS       DASQSL010001950         1531 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_163735, whole genome shotgun sequence.
ACCESSION   DASQSL010001950 DASQSL010000000
VERSION     DASQSL010001950.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1531
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163735"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..138
                     /locus_tag="VE844_19680"
                     /pseudo
     CDS             1..138
                     /locus_tag="VE844_19680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020563558.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
     gene            complement(164..1333)
                     /locus_tag="VE844_19685"
     CDS             complement(164..1333)
                     /locus_tag="VE844_19685"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03487.1"
                     /translation="MHPGHYTMNATDLYLYAATLLQAQLRWRDYGPKCTATRLLGVLF
                     YAAAQLCSVFAACSRLREAPSDQAVRNALVALCPEARVLEQQFNRRFAQQLPKALRRR
                     RNRLAIDLTLIPYHGQPHQRIEEIYRSQAKSGTTHFHAYATCYVVHKGQRFTVALMRV
                     ERGTTMVTVLKQLLRTARSAGVRPSLLLLDRGFYRVEVIRYLPAARYPFLMPVIGRGL
                     KPSDPRGPSGTYAFVAQKRWGWARYTLSNADGQTATVQIRIHCRNWQGRRGRHGRQPL
                     VYAYWGLEPKTTHWVYQTYRPRFGIETSYRQLQQARIQTTARSPALRLLFVGIALLLR
                     NIWVWAHWHRLATPRRGGRKLNLPRPRFKTLLMWLTHVAEQSFGFTDYVVTERLA"
BASE COUNT          329 a          438 c          470 g          294 t
ORIGIN      
        1 tcaggattcc accgaggcca cccaagaggt gggtggcttt cggcttccga tcgagcagtt
       61 gcaccgtgaa ggtaaaaaca ggttacgggc ttggaacgct gccagtgtcg caaggcacgc
      121 attcagcgca accacattca gtagttccaa gtttgccagc ttgctaagct aggcgttcag
      181 tcacgacgta gtcggtgaag ccgaagctct gttcggcgac gtgtgtcaac cacatcagca
      241 aggttttgaa gcgcggcctg ggcaggttca gcttgcgacc gccgcggcgt ggtgtagcga
      301 gccgatgcca gtgcgcccag acccagatat tgcgtagcag aagcgcgata ccgacaaaaa
      361 ggagccgcag tgctggagag cgtgcggtgg tctggatccg tgcctgctgg agttgacgat
      421 aactggtctc aatgccaaag cgcggtcggt aggtctggta gacccagtgg gtagtcttag
      481 gctccaagcc ccagtaggca tagaccaggg gctgacgccc atggcggcct cgtcgcccct
      541 gccagttgcg gcaatggata cggatctgca cggtggccgt ttggccgtcg gcattgctca
      601 acgtatagcg cgcccaaccc cagcgctttt gtgcgacaaa tgcataggtg ccgcttggcc
      661 cccgcggatc cgagggttta aggccacggc cgatgaccgg catgaggaac ggataacgcg
      721 ccgctggcaa atagcggatg acctcgacgc ggtagaagcc ccggtcaagc agcagcaaac
      781 tcgggcgcac acccgcgctg cgcgccgtac gcagcagttg cttgagcacc gtgaccatcg
      841 tggtgccccg ttcaacccgc atcaacgcga ccgtaaagcg ctggccttta tgcaccacgt
      901 agcaggtggc ataggcatga aaatgcgtgg tgccgctttt ggcctgactg cggtagatct
      961 cttcgatgcg ctgatgcggc tggccgtggt aggggatcag cgtcaagtcg atcgccaggc
     1021 gatttcggcg tcgacgcagc gcttttggca gttgctgcgc gaagcggcgg ttgaactgct
     1081 gctccagcac cctcgcctcg ggacagagcg cgaccaaggc attgcgtacg gcctgatcgc
     1141 tgggcgcctc gcggagccga ctgcaggcgg caaacaccga acacaactgt gcagcggcat
     1201 aaaacagcac ccctagcaac cgtgttgcgg tacacttggg gccataatca cgccagcgaa
     1261 gctgggcttg caacagcgtg gcggcataga ggtagagatc ggtagcgttc atagtatagt
     1321 gacctgggtg catcgtgttt tcctccgggg gttgctattc accctagtat acggaaaacc
     1381 gctgcacccg ccctcggatc gctacttgtt gcgatcagcg aaacttggaa ctactgaaat
     1441 tggataatat atgatcagcc agaaaaaaac tgggcaagga tatcacccta atgagtaacc
     1501 gctcgcaatt cgacttgcaa ctccccactc t
//
LOCUS       DASQSL010001951         1048 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_119278, whole genome shotgun sequence.
ACCESSION   DASQSL010001951 DASQSL010000000
VERSION     DASQSL010001951.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119278"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1048)
                     /locus_tag="VE844_19690"
     CDS             complement(<1..>1048)
                     /locus_tag="VE844_19690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011341901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HZC03488.1"
                     /translation="YVDLDTQTIKPEVTRLLHTSIVQKHLVVPVAKSGTTLTMAMADP
                     TNVLAVDDIKFMTGLKVDLVVATEGAIRRAIERYYDSSESLQNVMASIEDAGMEVMED
                     QEDPNLNFSDLKQAVEEAPVVKLVNVILAEAIKKGASDIHAEPYERVFRVRFRIDGVL
                     YEVMTPPMSLKNAIISRLKIMASLDISERRLPQDGRMKVKYKGREVDFRVSTLPTLFG
                     EKVVMRLLDRSNLKLDLSKLGFAPKALADFEAAIRAPYGMLLVTGPTGSGKTTTLYSA
                     LDRLNQPETNIMTAEDPVEFNIRGINQVQIRESIGLNFAAALRSFLRQDPDVIMVGEI
                     RDHETAEIAVKAALT"
BASE COUNT          209 a          283 c          311 g          245 t
ORIGIN      
        1 gttaaggccg ccttgacggc aatttctgcc gtctcatggt cacgaatttc ccccaccatg
       61 atgacgtccg ggtcttgccg aaggaaggag cgcagagcgg cggcaaagtt caggccgata
      121 ctctcgcgaa tctgcacttg attgatcccc ctgatgttga actcgacagg gtcttcggcc
      181 gtcatgatgt tcgtctctgg ctgattgagg cggtcgagcg ccgaatacag cgtggtcgtc
      241 ttgccgcttc cagtggggcc tgtgaccagg agcataccat agggggcgcg aatggccgct
      301 tcgaagtcgg ccagcgcttt gggggcaaac cccaatttgg atagatctaa tttcaggttc
      361 gatctatcca gcaagcgcat cacgaccttt tcgccaaaca gggtcggcag cgtggacacg
      421 cgaaagtcga cctctcgccc cttgtatttg accttcatgc gtccatcctg ggggagacgc
      481 cgctcagaaa tgtctaggct ggccatgatc ttgagacgag agataatggc gttcttgagg
      541 ctcatggggg gagtcatgac ctcatacagc acgccgtcga tgcgaaagcg cacacggaac
      601 accctctcat agggttcggc atggatgtcg cttgccccct tcttgatggc ctcggcgagg
      661 atgacattaa ccaacttgac aacgggtgct tcttcgacgg cctgcttgag gtcgctgaag
      721 ttgagattgg ggtcttcctg atcctccatc acctccatac cggcatcttc gatgctggcc
      781 atgacgtttt gtaggctttc cgaggaatcg tagtagcgtt caatggcgcg tcgaatcgca
      841 ccctcggtcg ccaccacaag atcgactttc aatccggtca taaacttgat gtcgtcaaca
      901 gcgagaacat tggtggggtc ggccatggcc atggtcaggg tggtgccgct tttcgcgaca
      961 gggacaacga gatgcttctg gacgatgctg gtgtggagaa ggcgggtcac ctctggcttg
     1021 atcgtctggg tgtcgaggtc gacatagg
//
LOCUS       DASQSL010001952         1622 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_119297, whole genome shotgun sequence.
ACCESSION   DASQSL010001952 DASQSL010000000
VERSION     DASQSL010001952.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1622
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119297"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            138..302
                     /locus_tag="VE844_19695"
                     /pseudo
     CDS             138..302
                     /locus_tag="VE844_19695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016876797.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS982 family transposase"
     gene            336..>1622
                     /locus_tag="VE844_19700"
     CDS             336..>1622
                     /locus_tag="VE844_19700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HZC03489.1"
                     /translation="MDTLRIRGARTHNLQNLDLDLPRDRLIVITGLSGSGKSSLAFDT
                     IYAEGQRRYVESLSAYARQFLSIMQKPDLDHIEGLSPAISIEQKSTSHNPRSTVGTIT
                     EIYDYLRLLYARVGEPRCPEHGTVLKAQTISQMVDQVLSQPEGARLMLLAPIVQGRKG
                     EHREVIDALRRQGFVRARINGEVVELEAAPELDLYKKHTIEAVVDRFKVKPDLRVRLA
                     ESFETALRLSDGVAKVAFMDTPEAADLVFSARFACPYCGYSLNELEPRLFSFNNPAGA
                     CGACDGLGLIQFFDPERIVHRPELSLPGGAIRGWDRRNVYYYHLIAGLARHYQFDLDT
                     PFKDLPKAIQQVILEGSGTTVIRFDYPDSQGGIQRRRHPFEGVIPNLKRRYRETESSV
                     VREELAKHLATRPCSSCQGTRLNLSARHVFVADRSLP"
BASE COUNT          327 a          502 c          429 g          364 t
ORIGIN      
        1 ggccgattca aaggccggca gcaattgctg aaactcttcc accctcagtc cagtcgccgc
       61 gagaaattct cgcgctttgt ttttcaacgt ttcataactc agcatgccct aagtatacgc
      121 tatccccaat aatgtctaat gatcaactga aaaacatctc gcaaatcgag cattcccgcc
      181 atcgcagccc attcaacttc tttgttaatc tgatggccgg gttagtggcc tatacattcc
      241 gcgagaagaa accctccctt aatatcaggc tccctcaaac tctccctgcc ttggcactgt
      301 gattcttacg tcgaactcac gttatattac ttttaatgga taccctccgc attcgcggcg
      361 cccgcactca taatctgcaa aacctcgatc tggatctgcc cagagaccgg ctcatcgtga
      421 tcaccgggct gtccggttcg ggcaagtctt cgctggcctt cgatacgatc tacgccgaag
      481 gccagcgccg ttacgtggag tcgctctcgg cctatgcgcg gcagttcctg tcgataatgc
      541 aaaaaccgga cctcgatcac atcgagggcc tatcgccggc catctcgatt gagcaaaaat
      601 cgacctcgca caatccccgt tccaccgtcg ggaccatcac cgagatctac gattatctgc
      661 gcctgttata cgcccgcgtc ggcgaaccgc gttgccctga gcacggcacc gtactcaagg
      721 cccagaccat cagccagatg gtggaccagg tcctctccca gccggaaggc gcgcgcctga
      781 tgctgctcgc gcccatagtc cagggacgca agggtgagca ccgagaggtg atcgacgcct
      841 tacgccggca agggttcgtg cgggcgcgca tcaatggtga ggtcgtggag ctcgaggcgg
      901 cgccggaatt ggatctctac aaaaaacaca ctatcgaggc cgtggtcgat cgtttcaagg
      961 tcaaaccgga tctgagagtg cgcttggcgg agtcgtttga gaccgccctt cggttatccg
     1021 atggggtggc caaggtggcc tttatggata cccctgaggc agcggatctg gtcttttccg
     1081 cacgctttgc ctgcccctac tgtgggtata gcttaaatga gcttgagcca cgcctgtttt
     1141 cattcaataa tcccgccggt gcctgtgggg cgtgcgatgg cttaggcctc atccagttct
     1201 ttgatcccga gcgcatcgtg caccgacccg agctgagcct ccctggcggc gccatccgtg
     1261 gctgggatcg gcgcaatgtc tattattatc acctgatcgc gggactggcg aggcattatc
     1321 agttcgatct ggatacgcct tttaaggatc tgccgaaagc gatccagcag gtgatcctag
     1381 aaggcagtgg cacgaccgtg atccgcttcg attaccccga ctcccaaggg gggatccagc
     1441 ggcgccgcca tcccttcgag ggcgtcatcc cgaaccttaa gaggcgttac cgtgaaacgg
     1501 agtcgagcgt ggtgcgcgaa gagctcgcca agcacctcgc tacccgtcct tgttcatcgt
     1561 gtcagggcac gcggctcaac ctttccgccc ggcatgtctt tgttgccgat cgatcgctgc
     1621 cc
//
LOCUS       DASQSL010001953         3240 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_108448, whole genome shotgun sequence.
ACCESSION   DASQSL010001953 DASQSL010000000
VERSION     DASQSL010001953.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3240
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108448"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..453
                     /locus_tag="VE844_19705"
     CDS             <1..453
                     /locus_tag="VE844_19705"
                     /inference="COORDINATES: protein motif:HMM:NF039608.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03490.1"
                     /translation="GAASPGTTVTLDAGSYSVDEVELSGYTKSLGTDCSGSIAAGETK
                     TCTITNDDQPQQAQLTVTKNVVNDNGGSAAVGDFPLFVDSGSVISGAQNTFTTGPHTV
                     SETNQPGYTATIGGDCAADGSITLNPGDVKTCTITNNDNPPEEPPPPV"
     gene            complement(520..1002)
                     /gene="moaC"
                     /locus_tag="VE844_19710"
     CDS             complement(520..1002)
                     /gene="moaC"
                     /locus_tag="VE844_19710"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012639485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HZC03491.1"
                     /translation="MTKLTHFNQSGEAHMVDVGAKAVTHRIAVAEGRIVMQPETLKLI
                     EGGGHKKGDVLGIARIAGIMAAKRTAELIPLCHPLSLTHIAIDFTPLDDKNAIQCRAT
                     VTTDGKTGVEMEALTAVQIALLTIYDMCKAVDRGMTMEVIRLIEKSGGKSGAWVRTEG
                     "
     gene            1068..1307
                     /locus_tag="VE844_19715"
     CDS             1068..1307
                     /locus_tag="VE844_19715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018952696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HZC03492.1"
                     /translation="MAITVKYFASLSERLGRREELIEAAADMTVASVWAKVTGGEPLP
                     PTILMAVNREYATLDTPVHDGDELAFLPPITGGRL"
     gene            1304..1741
                     /locus_tag="VE844_19720"
     CDS             1304..1741
                     /locus_tag="VE844_19720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008932465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HZC03493.1"
                     /translation="MRIEVRAQAFDPWVEIGRYQTGVLSQQSRYGATAVFVGTMRDVN
                     EAAAVHAMTLEHYPGMTERHLQRITEEAMGRWDIIDILILHRVGELRPGDPIVLIAVW
                     SAHRAAAFEACRFLIEDLKSRAPFWKKERLDAGFRWVEKNTPG"
     gene            1763..3208
                     /locus_tag="VE844_19725"
     CDS             1763..3208
                     /locus_tag="VE844_19725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009618617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative sulfate exporter family transporter"
                     /protein_id="HZC03494.1"
                     /translation="MNDTGSQLKSEDWLSLGIGLIIFFLAVGPLAGVDLLGWSAKLQI
                     WSNPLQMLAPVSKDSGVSGFTALILTYLFVLALMSLGALLLRANLKRFVIGFTLVFWI
                     SYLCWIIGHFANIAATPDQFEKLGIRWSLNLTGEAGYILALIAGLAVGNFFVGFSQKI
                     QEALRPEWYIKTAIVVMGAALGVKAAESFGLATTILARGLCAIIEAYLLYWAVVYYVA
                     RRYFKFNREWAAPLASGISICGVSAAIATGAAIRARPMIPIMVSSLVVIFSVVELLLL
                     PFLAQQFLYHEPMVAGAWMGLAVKTDGAGIASGAITDALIRAKAFEAEGIKYEEGWIL
                     MAATTTKIFIDIFIGIWTFLLAYIWTGVIDRKEGEELRGKELWQRFPKFVIGYVATFL
                     IFLLLCMNDPAIIPTAKTGSDQANVYRQLFFLMTFFSIGAVSNFRKLWEEGIGKLAAV
                     YVVSLFGFVIWVGLLISWFFFHGIKPPIVTG"
BASE COUNT          653 a          874 c          956 g          757 t
ORIGIN      
        1 ggtgcggcga gccccggtac gacggtgacg ctggatgcgg gcagctacag cgtcgatgag
       61 gtggagctct ccggctacac caagagcctg ggtaccgact gctcgggcag catcgccgcg
      121 ggtgagacca agacctgcac catcaccaac gatgaccagc cgcagcaggc gcaattgacg
      181 gtcaccaaga acgtggtgaa cgacaacggc gggtcggcgg cggtcggtga cttcccgctg
      241 tttgtggaca gcggctcggt gatatcaggt gctcagaaca ccttcaccac cggtccccac
      301 acggtcagcg agaccaacca gcccggctac acggcgacga ttggcggtga ctgtgcggcg
      361 gacggctcga tcaccctcaa tccgggtgac gtgaagacct gcactatcac caacaacgat
      421 aacccgccgg aggaaccgcc tccgcccgta tgatacggcc gtgaacttca ctgaactcct
      481 ctaaagaaga agacatcaag gcgcaaatca ggcgcgtgct tatccctcgg ttctaaccca
      541 cgcgcccgat ttaccgccgg acttctcgat caggcggata acttccatgg tcatcccccg
      601 atctacggcc ttacacatat cgtagatcgt aaggagcgcg atctgaaccg ccgtcaaggc
      661 ctccatctca acgcctgttt ttccgtctgt agttacggtc gcacgacatt gaatcgcatt
      721 tttgtcatcc aggggtgtaa aatcgatggc aatatgggtg aggcttaaag ggtgacagag
      781 agggatcagc tcggcagtgc gctttgcggc cataatgcct gcgatccggg cgatcccgag
      841 cacatcgccc tttttatgtc cacctccctc gatgagcttc aaggtctcag gctgcatcac
      901 gatccggcct tcggccaccg cgattctgtg ggtcaccgcc ttggcgccga catcgaccat
      961 atgcgcttcc ccgctctgat taaaatgcgt gagttttgtc atagttttta aatggctaaa
     1021 tgcgggataa tgaacgcaaa cgggcgtttg ttatcgatta cgattaaatg gcaattactg
     1081 taaaatattt tgcaagtctg agcgagcgtc taggacgtcg ggaagagctc atcgaggcgg
     1141 ctgctgatat gacagtggcg agcgtctggg ccaaggtcac cggtggcgag ccgttgccgc
     1201 cgacgatcct catggcggta aatagggagt acgctacctt ggatacccct gtccatgatg
     1261 gggatgagct ggcgttcttg ccgccgatca cgggaggcag gttgtgagga ttgaagtacg
     1321 cgcgcaagcc tttgacccgt gggtcgagat cggccgttat caaaccggcg tgctaagcca
     1381 acagagccgg tatggagcca ccgccgtttt tgtcggcact atgcgcgatg tcaacgaggc
     1441 agccgcagtg catgccatga ccctggaaca ctatccgggc atgaccgagc ggcatctgca
     1501 gaggataacc gaggaggcga tggggcgctg ggatattatc gatatcctga tcctgcatcg
     1561 ggttggggag ctgcgccccg gcgatcccat cgtcttgata gctgtctggt cggcgcaccg
     1621 ggcggcggct tttgaggcct gccgtttttt gatcgaagat ttaaaatcac gggcgccatt
     1681 ctggaaaaaa gagaggctcg atgcgggttt ccgctgggtg gaaaagaaca caccaggctg
     1741 aataataaat ataaggtgac tcatgaatga cacaggatcc caactgaaaa gcgaagactg
     1801 gttatctcta gggatcggtt tgatcatctt tttcctggcg gtggggccgc tggccggcgt
     1861 ggatctcttg ggctggtcgg ccaaactcca gatctggtcc aatccactgc aaatgcttgc
     1921 cccggtctca aaagactctg gcgtctccgg tttcacggcg ctgatcttga cctatctgtt
     1981 tgtcctggcg ctgatgtccc tgggcgctct cctgctcagg gccaatctca agcgctttgt
     2041 catcggtttt accctggtct tttggatcag ttatctctgt tggatcatcg gccattttgc
     2101 caatatcgcc gcgaccccag accagtttga gaaactgggg atcaggtggt cgctgaatct
     2161 gacgggcgaa gccggctata tacttgccct gatcgcgggg ttagcggtcg gtaatttctt
     2221 tgtagggttc tcgcaaaaga tccaagaggc gctgcgtccc gagtggtata tcaagaccgc
     2281 cattgtggta atgggtgcgg cgcttggggt caaggccgcc gaatccttcg gcctggccac
     2341 gacgatcctc gcccggggct tatgcgccat catcgaggcc tatcttctgt actgggcggt
     2401 ggtttactac gtcgcccgca gatatttcaa gttcaaccgg gagtgggcag cacccctggc
     2461 ctcaggtatc tcgatctgcg gtgtgtcagc cgctatcgcc acaggcgcgg cgatccgggc
     2521 gcgtccgatg ataccgatca tggtctcttc gctggtcgtg atcttctccg tcgtcgagct
     2581 tttgctactg cccttcctgg cgcaacagtt cctttaccat gaaccgatgg tggccggcgc
     2641 ctggatgggg ctcgcggtca agaccgatgg tgcgggcatt gcgagcggtg ccatcaccga
     2701 tgccttgatc cgggcaaaag ccttcgaggc tgaaggcatc aagtatgagg aaggctggat
     2761 cctaatggcg gcgacgacta ccaagatctt catcgatatc ttcattggca tctggacctt
     2821 tctcttggcc tatatctgga ccggcgtcat cgatcgtaag gagggggaag agctacgggg
     2881 aaaagagctc tggcagcgct ttcccaagtt cgtgatcggt tatgtggcta ccttcctgat
     2941 ctttttgctg ttgtgcatga atgatcccgc gatcatcccg acggctaaga ccggcagtga
     3001 tcaggcgaat gtctaccgac agctgttctt cttgatgact tttttctcga tcggggcggt
     3061 gtctaatttt cgtaaactct gggaagaggg tatcgggaaa ttggcagcag tctatgtcgt
     3121 cagcctgttt ggttttgtga tctgggtagg gcttttgatc tcctggttct ttttccatgg
     3181 gatcaaacca cccattgtga ctggttaggc gtgaggcgtg aggtgtgaag cgtaaggcgt
//
LOCUS       DASQSL010001954         1689 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_108462, whole genome shotgun sequence.
ACCESSION   DASQSL010001954 DASQSL010000000
VERSION     DASQSL010001954.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108462"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..491
                     /locus_tag="VE844_19730"
     CDS             <1..491
                     /locus_tag="VE844_19730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002692380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="putative PEP-binding protein"
                     /protein_id="HZC03495.1"
                     /translation="KVREELGLTNVEIMVPFVRTLEEARRVIAILKQNGLERGRHGLR
                     LIMMCEVPSNALLAKAFLESFDGFSIGSNDLTQLILGLDRDSALVADAFDERDPAVKE
                     LLHRTIQACREAGKYIGICGQGPSDHPDLATWLLEEGIESLSLNPDTVVETWLYLAGE
                     TI"
     gene            502..1572
                     /gene="glcE"
                     /locus_tag="VE844_19735"
     CDS             502..1572
                     /gene="glcE"
                     /locus_tag="VE844_19735"
                     /EC_number="1.1.99.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005960009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycolate oxidase subunit GlcE"
                     /protein_id="HZC03496.1"
                     /translation="MPDPANILQDLIDTVKEANDSCRPLCIIGGETKAFYGRAIEGRR
                     LSVAKYQGIVAYEPTELVLTARAGTRLTEIEEVLAAQGQMLAFEPPHFGVTATLGGMV
                     AVGLSGPRRPYVGAVRDFILGVKCLTGAEQIVSFGGQVMKNVAGFDVSRLMAGALGTL
                     GVLLEISLKVLPVPEHALTLQRETTAQEAIAFMNRWAGQSLPLSAACHDGARLYLRLS
                     GTYRGVTAASAKIGGERLTDGAIFWWDLREHRLAFFVPKQPPLWRLSVPPATPPLDLP
                     GEQLIDWGGAQRWLRSHAAPELIRQAARDKGGHALVFRGGDRQAEVFSPLSPALEQIH
                     RRLKQAFDPHRIFNPGRMYSYL"
BASE COUNT          345 a          468 c          504 g          372 t
ORIGIN      
        1 gcaaggttcg cgaagagttg gggctgacta acgtagagat catggtgcct tttgtgcgta
       61 cacttgagga agcgcggcgg gtgatagcga tcttaaaaca gaacgggctc gagcgtggcc
      121 gccacggatt gcgcctcatc atgatgtgtg aggtcccatc gaatgccctg ctggcaaagg
      181 cattcctgga atcattcgac ggtttttcga tcggttcgaa tgatctgacc caattgatcc
      241 tgggccttga ccgggattcc gccctcgtcg ccgatgcctt cgacgagcgt gatccggcgg
      301 tcaaggaatt gctccatagg acgatccagg cctgccgtga ggcaggaaaa tacatcggga
      361 tctgcggcca gggtccttcg gatcacccgg atcttgccac gtggttgctc gaggagggga
      421 tcgaaagcct ctcattgaac cccgatacgg tggtcgagac ctggctttat ctggccggtg
      481 agacgattta aacgccaagg catgcctgat ccggcaaata tccttcagga tctcatcgat
      541 accgtcaagg aagccaatga ttcatgccgg cctctgtgta tcatcggcgg cgagaccaaa
      601 gctttttacg ggcgggcgat cgagggccgg cgtctgtctg tagccaaata tcaggggatc
      661 gtggcctacg aacccaccga acttgtactg accgcccgtg cgggcacccg cttgaccgag
      721 atagaggaag tgcttgccgc tcaaggccag atgctggcgt ttgaacctcc ccactttggg
      781 gtgacagcga ccttgggcgg gatggtcgcc gtcggactat cagggccgcg tcgcccgtat
      841 gtcggggctg tccgggattt tatcctaggg gtgaaatgcc tgaccggggc ggaacagatc
      901 gtaagcttcg gcggacaggt catgaaaaac gtggcgggtt tcgatgtctc tcggctcatg
      961 gccggggcac tggggacctt aggggtgctc ttggagatct cgctcaaggt attgccggtg
     1021 cccgagcatg cgcttacctt gcaacgggaa accaccgcgc aagaggctat tgccttcatg
     1081 aatcgttggg ccggccaatc tctaccgctt tcagcggctt gccatgatgg agcaaggctc
     1141 tatctgcgtc tgtccggcac ctatcgcggc gtgacggccg cctccgctaa gatcggagga
     1201 gaaaggctta ccgatggggc tatcttttgg tgggatctac gcgaacatcg cttagccttt
     1261 ttcgtgccta agcaacctcc actctggcgt ttatccgtgc ccccggccac cccgcccctg
     1321 gatctgcccg gagagcaatt gatcgactgg ggaggtgcac agcgctggtt acgtagtcac
     1381 gccgccccgg aacttataag acaagcggcc agggataagg gtggacatgc cctcgtgttt
     1441 cgcggcggcg atcggcaggc cgaggtattt tcacctctat caccagccct ggaacagata
     1501 caccggcgcc tcaaacaggc cttcgaccca caccggatct tcaatcccgg gcgcatgtat
     1561 tcttatcttt gaagaccaaa tcgatgcaaa tctcgcttgt ggattttatc aagaataccc
     1621 cggaaggtca ggaagcggac aatatcctgc atggtaactc gataatattc atgacttgcg
     1681 tgagccttg
//
LOCUS       DASQSL010001955         1242 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_94134, whole genome shotgun sequence.
ACCESSION   DASQSL010001955 DASQSL010000000
VERSION     DASQSL010001955.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1242
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94134"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(88..303)
                     /locus_tag="VE844_19740"
     CDS             complement(88..303)
                     /locus_tag="VE844_19740"
                     /inference="COORDINATES: protein motif:HMM:NF012787.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HZC03497.1"
                     /translation="MSTSRWTPCVAAVLLCSILLLCATDIVALQVGDQAPDFSLPATT
                     ADKVSLADYLGKKHVVLFFDIAAFAGP"
BASE COUNT          285 a          327 c          363 g          267 t
ORIGIN      
        1 gttaatttcc acggtgacgc ccagcacctg ggcattggcg gcctcgaact tgggcagatc
       61 cagttggaag gccagcgctt ccgaggttca gggcccggca aaagccgcga tgtcgaagaa
      121 taacacgaca tgtttcttcc ccaggtaatc ggcgagactg accttgtccg ccgtggtcgc
      181 cggcagggag aagtccggtg cttggtctcc tacctgcagt gccacgatat cggtggcgca
      241 gaggaggagg atactacaga gcagaactgc tgcgacacaa ggcgtccatc gactcgtgct
      301 catagtatct cctttcaggg aggatgactg ttggggatac ctcacccccc gcatagagaa
      361 cggaaggtca tctcctgtga taggaaccag gcatacgacg ccacctcctc ttcatgggct
      421 agctggaagc ctcaccattg agtatcaggc agatgtgccc tgatacttgg atcatggact
      481 ggtgtgcggg cagttgtgcc cgatgcccgt gatcagcgat ctcctgccat catcacggcg
      541 ggattcgctg gccctacagg agggcagcaa cgagacagtc aagagatgac cctcctcacg
      601 aggagggctt agaggcgggt caggagttgg ggtctcagca ggaagggaat gcaggaatgc
      661 tgctgacgta tccggagatg acgagagggc gaggacatca atggggggct catcagcgat
      721 ctcctctggc aacgccagca gtgacctcat caacaacggt acgcatcgac tgggagggat
      781 agtagagttg tcactccata taccagcatg ttcactggtg tcaagaaaaa tgtgtggtgc
      841 ctcggaaatc acgtggtgag gagactggat cgcgatggcg tcaagcgagt ccgtcgcaaa
      901 cctcgcattc tccagggtgc tttaacggcg caggacttta gatctctctg catgggtcag
      961 tagccctctt ctgtcagaat gggatcggct aatgcttgaa aaccctgtcc agcaaaggtt
     1021 taagctcttc gatcaatttc gtaggctaaa gcctccaagc cgctctatac aagcatttca
     1081 gagccgggtt tgctcaattt gacagaagag gggtaatcct ttctttgagt gccatttcct
     1141 cagcatcgtg aatcgcggcc gccttcaatc tccggatact gctgaagcag atcaagccta
     1201 tctgcggtcg tgagtcccgc gaggaacccg aactgatagc tt
//
LOCUS       DASQSL010001956         2517 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_173541, whole genome shotgun sequence.
ACCESSION   DASQSL010001956 DASQSL010000000
VERSION     DASQSL010001956.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2517
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173541"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..297
                     /locus_tag="VE844_19745"
     CDS             <1..297
                     /locus_tag="VE844_19745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014005708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconate dehydrogenase
                     (decarboxylating)"
                     /protein_id="HZC03498.1"
                     /translation="VIASWLLDLQAAALIEDPALSKFGGRVSDSGEGRWTIKAAIDEA
                     VPTPVLTAALYERFSSRGEADFVNKVLSAMRYQFGGHLEKPAEKSKASEGDNHE"
     gene            290..1693
                     /gene="zwf"
                     /locus_tag="VE844_19750"
     CDS             290..1693
                     /gene="zwf"
                     /locus_tag="VE844_19750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020711910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004345 - glucose-6-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HZC03499.1"
                     /translation="MNDSHSDALVFFGATGDLAYKKIFPALQAMVKRGRLNVPVIGVA
                     RSGWSVDQLRARAQDSLEKHGGVDPAGFEKLSDLLRYVQVDYTDPSTFDALRKELKEA
                     QRPAHYLAIPPFLFETVAEQLVKSGCAKGARVIIEKPFGRDLSSARDLNRILLGAFDE
                     AAIFRIDHYLGKRPVHNMLLFRFTNTFMESFWNRNYIESVQITMAEDFGVQGRGGFYD
                     ETGAIRDVIQNHLFQVLSNLAMEPPARADSESIRDEKVKVLKAIPPIDEKDLVRGQFR
                     GYRDEKGVAKDSLVETFAALRLEINSWRWKGVPFYIRAGKCLPATCTEIVGRFRKPPA
                     AICENALTENHLRFRLSPDVTIAMGMTVMAPGEEMIGQTVEMLASRSPHANEMDAYER
                     VLGAAMEGDATLFARQDYVEEAWRIVDSVLKKGTPIYPYETNTWGPKEVERVTPRGGW
                     RNPTVGQPREAVASEAA"
     gene            1784..2500
                     /gene="pgl"
                     /locus_tag="VE844_19755"
     CDS             1784..2500
                     /gene="pgl"
                     /locus_tag="VE844_19755"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: protein motif:HMM:TIGR01198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017057 - 6-phosphogluconolactonase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HZC03500.1"
                     /translation="MKIEVFADADSAAREAAAFATAEARAAITARGRFVMAVSGGQTP
                     WLMLRALAREEVPWDGLHVVQVDERVAAAGHPDRNLTHLRESLLEYAPLRIEQVHAMP
                     VESPDLDAAAARYALTLQAIAGSPSVLDLVHLGLGTDGHTASLVPGDPVLDVLDEDVA
                     VTGIYQGRRRMTLTYPILNRSRGVLWLVTGSEKAGMLGRLHAADASIPAGRIRRDQAL
                     VLADRAAASKLHSDSTTEVA"
BASE COUNT          526 a          704 c          790 g          497 t
ORIGIN      
        1 gtaatcgcgt cctggctgct cgatctccag gccgcggccc tgatcgagga ccccgcgttg
       61 tcgaaatttg gcgggcgcgt gtccgattcg ggcgaaggcc gctggacgat caaggccgca
      121 atcgacgagg cggttccaac gcccgttctc accgccgcgc tgtacgagcg attcagctcg
      181 cgcggcgaag ccgactttgt gaataaagtc ttgtctgcga tgcgttacca gttcggtgga
      241 cacctggaaa aacccgccga gaagtcaaag gcttctgaag gagataacca tgaatgattc
      301 ccactcggac gcgctagttt tctttggcgc aacgggcgat ctcgcctaca agaaaatctt
      361 cccggcactg caggcgatgg tgaagcgtgg acgcctcaac gtgccggtca tcggcgtcgc
      421 cagatctggc tggagtgtcg atcaactccg ggcgcgagcg caggacagcc ttgagaagca
      481 tggcggggtt gatcccgcag gtttcgaaaa gctaagtgat ttgctgcgct atgtccaggt
      541 tgactacaca gacccatcga cattcgacgc gcttcgcaaa gaactcaagg aagcgcagcg
      601 gccagcacat tatctggcca ttccaccctt cctatttgaa accgtagcgg aacagctggt
      661 aaaatccggc tgtgccaagg gggctcgcgt tattatcgag aagcctttcg gccgtgatct
      721 ctcatcagca cgggatctca accggattct gctcggagcc ttcgacgaag cagcgatctt
      781 tcgcatcgac cactatctcg ggaagcggcc ggtgcacaat atgctcctct ttcgcttcac
      841 gaacaccttt atggagtcgt tctggaaccg caactacatc gagagtgttc agatcaccat
      901 ggcagaggac tttggtgttc agggacgagg aggtttctac gacgagactg gagcgatccg
      961 cgatgtgatc cagaaccacc tgttccaggt cctatcgaat ctggcgatgg aaccgccggc
     1021 cagagcggac agtgaatcca tacgcgacga gaaggtcaaa gtactgaaag caattccgcc
     1081 catcgacgag aaagacctgg tccgcggcca gtttcgcggt taccgcgacg agaagggtgt
     1141 ggccaaggac tcgctggttg aaacctttgc ggcgttgagg ttggagatca attcctggcg
     1201 ctggaagggg gttccttttt acatccgggc tgggaaatgc ctgccggcga cttgcaccga
     1261 aattgttggg cgattccgga aacctcccgc ggcaatttgt gagaatgctc tgacggagaa
     1321 ccatctgcgg ttccgcctca gtcccgatgt caccatcgcc atgggaatga cagtgatggc
     1381 tccgggtgag gagatgatcg gccaaacggt tgaaatgctc gcgagccgct ctccgcacgc
     1441 caatgagatg gacgcatacg aacgggtgtt gggagctgcg atggaaggag acgccaccct
     1501 gtttgcgcga caggactacg tggaggaggc ttggcgcatc gtcgattcag tgctgaaaaa
     1561 gggcacgccg atctacccat acgagacgaa tacgtgggga ccgaaagagg tcgagcgagt
     1621 gacaccaagg ggaggctggc gcaacccaac agtgggccag ccgagggagg ctgtcgccag
     1681 cgaggccgcg tgagacataa tcgcatcgcc cctggctagc ttttggattt cgatgtagcc
     1741 gggtttgcga acagttgagt caatcgggac tggagaagct gtgatgaaaa ttgaagtgtt
     1801 tgccgatgct gactcggccg cccgagaggc tgccgcattt gctactgccg aggccagagc
     1861 ggcgatcacc gcacgcggcc gcttcgtcat ggctgtcagc ggcggccaga ccccgtggct
     1921 catgcttcgt gctctggcac gtgaagaagt gccttgggat ggcttgcatg tggtgcaggt
     1981 ggatgagcga gtcgcagctg cgggacaccc cgaccgaaac ctgacgcact tgcgcgaaag
     2041 ccttcttgag tatgcaccgt tgcgcattga gcaggttcac gccatgccgg tggaatcgcc
     2101 tgacttggac gcggcagccg cgcgatacgc actgactctg caggcgatcg ccggttcacc
     2161 gtctgtgctc gacctcgttc acctgggcct cgggaccgac gggcacactg cctcgctggt
     2221 gcccggagat cctgttctcg acgtcttgga tgaagacgtc gcggtgacag gcatctacca
     2281 gggcaggcgt cgaatgacgc tgacgtatcc catcctcaat cgatcccgcg gcgtgctgtg
     2341 gctcgtgacc gggagtgaaa aggccggaat gcttggccgc ttgcacgccg cagatgcttc
     2401 gattccggcc ggccggatcc gccgagatca ggctctggta ttggcggatc gcgcggccgc
     2461 gagcaagctg catagcgatt cgaccacaga agtggcatga gtagatgcaa gtccggg
//
LOCUS       DASQSL010001957         1399 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_150929, whole genome shotgun sequence.
ACCESSION   DASQSL010001957 DASQSL010000000
VERSION     DASQSL010001957.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1399)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1399)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1399
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150929"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1312)
                     /gene="dnaK"
                     /locus_tag="VE844_19760"
     CDS             complement(<1..1312)
                     /gene="dnaK"
                     /locus_tag="VE844_19760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020719954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HZC03501.1"
                     /translation="MATKIIGIDLGTTNSVVAIMEGGEPKVIINEEGSRLTPSVVAFT
                     KEGEVLVGQVAKRQAIINPENTIYSIKRFMGRRWDEVQDELQRIPYKVVRGPSDTVRV
                     VVRDKEYTPQQISAFILQKLKKAAENYLGEAVSEAVITVPAYFNDSQRQATKEAGEIA
                     GLNVRRIINEPTASALAYGLDKKKDEVVAVYDFGGGTFDISILEVGDNVVEVKATAGD
                     THLGGDDLDQRIIDWLVAEFRKDQGIDLSKDKMAMQRLKEAAEKAKIELSSTLETEIN
                     LPFITADASGPKHLSMKLTRARFEQMVAELIEKTEGPSRQALKDSGLPPEKIDEAVLV
                     GGSTRVPKVHELVKQLFRREPHKGVNPDEVVALGAAVQAGVLAGDVKDILLLDVTPLS
                     LGIETLGGVMTTLIARNTTIPTRKSEVFTTAADGQTSVEIHVMQG"
BASE COUNT          247 a          450 c          358 g          344 t
ORIGIN      
        1 cgccttgcat aacgtggatt tccacgctgg tctgtccatc cgccgccgtg gtaaacacct
       61 cggatttgcg cgttgggatg gtggtattgc gtgcgatcag ggtggtcatc accccaccca
      121 acgtctcgat cccgagcgac agcggcgtca catcgagcaa caggatgtct ttgacgtccc
      181 ccgccagcac cccggcttgc accgcggcac cgagcgccac cacttcgtcc gggttcaccc
      241 ccttatgggg ttcgcggcgg aataactgtt tcaccagctc atgcactttc ggcacacggg
      301 tcgacccgcc caccagcacg gcttcgtcga tcttctctgg cggcaatccg ctgtctttca
      361 gcgcttgccg ggaaggtcct tcggttttct cgatgagctc ggccaccatc tgctcaaagc
      421 gtgcccgtgt tagtttcata ctcaaatgct tcgggccgct ggcatcggcg gtgataaagg
      481 gcaaattgat ctccgtctcc aaggtggacg agagctcgat cttagctttc tcagcggcct
      541 ctttgaggcg ctgcatcgcc atcttgtcct tcgacaggtc gatgccctgg tcttttctga
      601 actctgccac gagccagtcg atgatgcgct gatccagatc gtccccgcca aggtgtgtat
      661 caccggccgt ggccttcacc tcgaccacgt tgtcacccac ctcgaggata gagatatcga
      721 aggtaccgcc accaaagtcg tagaccgcga ctacttcatc ttttttctta tccagcccat
      781 acgccaaggc cgaggctgtc ggctcattga tgatgcggcg gacgttcaag ccagcgatct
      841 cacccgcctc ctttgtcgcc tggcgctgtg aatcattgaa gtaagcgggt acggtgatta
      901 ccgcttcgct gacggcctcg ccaaggtaat tctccgccgc tttcttcagc ttctggagga
      961 taaacgccga gatctgctgt ggggtgtatt ctttgtcacg caccaccacg cgtacggtgt
     1021 cgctgggacc gcgtacgacc ttgtatggga tccgctgcag ctcatcctgc acttcatccc
     1081 atcggcgccc catgaaacgc ttgatagaat aaatcgtatt ctcggggttg atgatcgcct
     1141 ggcgcttggc gacttggccg accaggactt ccccttcctt cgtaaacgcc actaccgatg
     1201 gcgttaagcg gcttccctct tcattgataa tgaccttggg ctccccaccc tccataatcg
     1261 ccactaccga gtttgtagtg cccaggtcga tcccgatgat ctttgttgcc atgaactctt
     1321 acctcctcta ccgttttcgc tcataacgtg ctgacgcgac cgctccaccg ccggccatca
     1381 gtgttgaggg gctttcagt
//
LOCUS       DASQSL010001958         3231 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_163798, whole genome shotgun sequence.
ACCESSION   DASQSL010001958 DASQSL010000000
VERSION     DASQSL010001958.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3231
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163798"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            108..722
                     /locus_tag="VE844_19765"
     CDS             108..722
                     /locus_tag="VE844_19765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020162338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HZC03502.1"
                     /translation="MIKKYAPGFLALCVISLSSPLAQADIYKYVDSQGRVYFTDSPNH
                     AGYKLIVKTWKWWAFPRRARNLATIKNRKVYGPAIQKVAMKYRLPHQLIHAVVTAESA
                     YNPTAVSRAGAVGLMQLMPDTAKRYRVLDPRDPLDNLHGGTHYLRDLLIMFDNDIRLA
                     LAAYNAGENAVIKYGFKIPPYEETQTYVKKVLEYYKRYQDITKN"
     gene            820..1860
                     /gene="pyrC"
                     /locus_tag="VE844_19770"
     CDS             820..1860
                     /gene="pyrC"
                     /locus_tag="VE844_19770"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004178166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HZC03503.1"
                     /translation="MQITLTRPDDWHVHLRDGAALAGVVRHTAARFARAIVMPNLKPP
                     IVTTEQARAYRERIVATLPRDRSFEPLMTLYLTDNTPSTEIRRAKRSGFIHAIKYYPA
                     GATTHSEYGVTDLRTVYPVLGAMEEHGIPLLVHGEVIDPEVDIFDRECVFIDRVLTPL
                     LRQFSGLKIVFEHITTKDAVDFVVAGPRHLAATLTAHHLLLNRNALFEGGIRPHHYCL
                     PVLKRERDREALLQAATSGDPKFFLGTDSAPHPVEAKETACGCAGIYTAHAAIELYAE
                     AFEQKGKLDKLESFASFHGAAFYDLPRNTATLSLRRDPWRIPARLPFAEHDLVPFRAG
                     ELCHWKLETLGS"
     gene            1827..2501
                     /gene="rnt"
                     /locus_tag="VE844_19775"
     CDS             1827..2501
                     /gene="rnt"
                     /locus_tag="VE844_19775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018973417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016896 - RNA exonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA];
                     GO_process: GO:0042780 - tRNA 3'-end processing [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease T"
                     /protein_id="HZC03504.1"
                     /translation="MSLETGNTGIINNEQKSRIAKRFRGFLPVVVDVETGGFNPLTDA
                     LLEIAAVTLTLAEQGLWRQEQTIACHVQPFPGANLDPVALEFTGIDPYHPFRLAVPEE
                     QALQTVFSAVHKAIEAHGCSRAILVGHNPAFDLAFIKAAIKRTGIKPNPFHSFSTFDT
                     ATLAGLAFGQTVLSRAVIAAGLEWDHAEAHSAIYDAERTADLFCAVINQWEVWACADK
                     ARAVSR"
     gene            complement(2491..>3231)
                     /locus_tag="VE844_19780"
     CDS             complement(2491..>3231)
                     /locus_tag="VE844_19780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012638098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HZC03505.1"
                     /translation="YSVSATALERIRDLAETFDVPIHMHVHETVQEIQQFLADTGVRP
                     WRHLQRLGLLSPRLQAVHMTQLTEEEIMQAGEYGIHVIHCPDSNLKLASGFCPVPRLA
                     QAGINIALGTDGAASNNSLDMFQAMRTAALLAKAVAQDACAIPAASALRMATLNGARA
                     LGLSEHIGSLIPGKAADLIAVDLGGIDSQPLYDPISQLVYATSRNKISHAWIAGKLVV
                     QNGALVTLDEAAILARTEAWRQRIGSSG"
BASE COUNT          707 a          886 c          885 g          753 t
ORIGIN      
        1 ttgcttgggc tgttggatat cctaaaaccc tgctaccggc cccgtcgatg gcaggattaa
       61 aggaggaata gggatctcat gctggatgat ggagaggtgt tggcgttatg attaaaaagt
      121 atgcccctgg gtttttagct ctatgtgtca ttagcttaag ctcacccctt gcccaggcgg
      181 acatttataa atatgtagat agtcaggggc gggtttattt taccgacagc cctaatcatg
      241 ccggttataa actgatcgtt aagacctgga agtggtgggc atttcctcgc cgggctcgca
      301 atcttgccac tatcaaaaac cgaaaggtct atggaccggc cattcagaag gtggcaatga
      361 aataccgcct cccgcatcag ctgatccacg cggtggtgac agcggagtct gcttataacc
      421 caacggccgt gtccagggcc ggagccgtgg gactcatgca gcttatgccc gatactgcga
      481 aacgttatag ggtgctcgat ccccgagatc cactcgataa cctccacggc ggcacccatt
      541 atttacgcga tcttttaatc atgtttgata acgacatccg gttggcgctt gcggcctaca
      601 atgccggaga gaatgcagta ataaaatatg gttttaagat cccgccctat gaggagaccc
      661 agacctatgt aaagaaggtc ttggaatatt acaaacgtta tcaagatatt actaaaaatt
      721 agacatttat atcaatagcc gcttctcgtc ctatctcatc taaatcccat tcgtttggga
      781 gtgctcattc tcccttacgg cgcggtataa tctttgccga tgcaaatcac tttaacgcgc
      841 ccggacgact ggcacgtaca tctgcgtgat ggggctgcgt tggccggtgt ggtaagacac
      901 acagccgcgc ggtttgcgcg tgctatagtc atgccgaacc tcaaaccacc cattgtcact
      961 accgagcagg cccgcgccta ccgggaacgg atcgtggcta ccttaccgcg ggatcgcagc
     1021 tttgagccac tgatgactct ctatctcacg gataatactc cctctaccga gatccggcgc
     1081 gccaagcgca gtggttttat ccatgccatc aagtattatc ccgccggtgc gactacgcat
     1141 tcggagtacg gcgtgaccga tctgcgcacg gtctatccgg tgctcggcgc gatggaggag
     1201 cacgggatcc ctttgctcgt gcacggcgag gtgatcgatc cggaggtgga tatcttcgac
     1261 cgtgaatgcg tcttcatcga tcgcgtgctg actcccttgc tcaggcaatt tagtggactt
     1321 aagatcgttt ttgaacatat cacgaccaag gatgcagtcg attttgtggt agcgggccct
     1381 cggcatctcg cagccaccct cacagcccat cacctgttat taaatcgtaa tgccttgttc
     1441 gagggcggaa ttcgccccca tcattactgt ctgcctgtgc tgaagcgcga gcgcgatcga
     1501 gaggctttgc tccaggctgc aacgagcggt gatccgaaat tctttcttgg caccgacagt
     1561 gccccgcatc cggtagaggc gaaagagaca gcgtgcgggt gtgccgggat ctacacagcg
     1621 catgcagcta tcgagcttta tgccgaggcg tttgagcaaa aggggaagct tgataagctc
     1681 gaaagctttg cgagttttca cggtgcagcc ttttatgatc tgccccgaaa cacggcaacg
     1741 ctttccttgc gcagagatcc ctggcgcatt ccggcaaggc tgccatttgc agaacacgat
     1801 ctggtgccgt tcagggcagg cgagctatgt cactggaaac tggaaacact gggatcataa
     1861 ataatgaaca aaagtcgcgg atagcgaagc gctttcgcgg gtttttgccg gtggttgtgg
     1921 atgtagagac aggcgggttt aatccgctga ccgatgcgct ccttgagatc gccgccgtga
     1981 ctctcacgct cgcagagcaa ggcctatggc ggcaggaaca gaccatcgct tgccatgtac
     2041 agcctttccc cggcgccaat ctcgatccgg tcgcgctgga atttaccggc atcgatccct
     2101 atcatccctt ccgcttggcg gtacccgagg aacaagcctt gcaaaccgtg ttttcagccg
     2161 tgcacaaggc catagaggcc catggctgtt cccgcgctat cctggtcgga cacaatcctg
     2221 cgtttgacct cgcctttatc aaagcggcca ttaaacgcac gggcatcaaa cccaatccat
     2281 ttcattcttt cagtaccttt gacacggcga cactcgcagg tcttgccttc ggccagacag
     2341 tgttatcgcg cgcggttata gcggcggggc tcgaatggga ccacgccgag gctcattcag
     2401 ccatctacga tgcagaacgc acggccgatc tgttctgtgc ggtcatcaat caatgggaag
     2461 tctgggcctg tgcggataaa gcacgcgccg tcagccgcta gaaccgatgc gttgtcgcca
     2521 cgcctcagtt ctagcaagaa tggctgcttc atccagggtg acaagcgcac cattctgtac
     2581 cacgagcttc cctgcgatcc aggcatggct tattttattg cgcgaagtag cgtaaaccag
     2641 ctgtgaaatc ggatcgtaga gcggttggct gtcgatgccg ccgagatcca cggcgatgag
     2701 gtctgccgct ttgccgggta tgagcgagcc tatgtgctcg ctcaagccca aggccctcgc
     2761 accattgagc gtagccattc gaagcgcgct tgcggcgggg atcgcgcagg cgtcttgagc
     2821 cacggccttg gcgagcaaag ccgccgtgcg catcgcttga aacatatcca ggctattgtt
     2881 actcgccgcc ccatcggtgc caagcgcgat attgatccct gcttgtgcaa gcctgggtac
     2941 tggacaaaaa ccgctggcga gtttgagatt ggagtccggg cagtggatga catggatacc
     3001 gtactctccc gcttgcatga tctcttcttc ggtgagttga gtcatgtgta cggcctgcaa
     3061 ccggggagat aaaaggccga gacgctgtaa atgccgccaa gggcgaacgc ccgtgtctgc
     3121 caggaattgc tggatctcct ggacagtctc gtggacatgc atatggatgg gaacatcgaa
     3181 tgtttctgcg aggtctctga tccgttcaag agcggtcgcc gagacactat a
//
LOCUS       DASQSL010001959         2072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_150950, whole genome shotgun sequence.
ACCESSION   DASQSL010001959 DASQSL010000000
VERSION     DASQSL010001959.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2072
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150950"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(149..1873)
                     /locus_tag="VE844_19785"
     CDS             complement(149..1873)
                     /locus_tag="VE844_19785"
                     /inference="COORDINATES: protein motif:HMM:NF013068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03506.1"
                     /translation="MRTPKPLYAQQRRIYHSELLTCPSCGDLLVGCNYLAWDKTVQTL
                     DQVLSIASRPAHCPRPTCPGFEMRLLSAHGQRLAIANSTYGYDVLARIGWLRKTYQAT
                     DDQIQADLSRQIRISTSHVRYLYQQIYLPLLACHQRQQHHRLGQVARQQGGIIIALDG
                     LEPEAGEPQLWFVRDLLTGLTLRSGWLAQQSQAAFEAFLAPLRRLDWPILAILSDKQT
                     GLVPAVASVFPKRPHQFCQAHYLRNLATPLADADTAFKSEVRKSVRDQVGSLIRQEAI
                     AGDAPNGVLTVTGILPELSADPPLAPWAASEGLGRERGDTAKADELVNHLFAPTRYLL
                     TLKGRPPFRLAGLETYERLQGIVGLSFDLLTHRLDLRLVKLYQGLKEALAPFAQTYAE
                     LQQGAVWLRDIADILALSAEPGLRAKQVAGHLSGYLDALYHQRNLSPLLHAFSEHLDT
                     VSQSYWPGLFHCYEVAGLAQTNNGLESHFRDTQRRLLRTTGQKGQTKRTLHRLGAWEL
                     LDRPLTEAEAVEVLSHIPAEDFAKERQRLYHHRQRFRFQMRSLNGSEAQLEKLRQQWQ
                     ELPKMPAG"
BASE COUNT          454 a          547 c          621 g          450 t
ORIGIN      
        1 atattgaatc ccaaccagtc aaatcccgcc tggtcacctt ccaaggtatg atggatatga
       61 ctcttggctt cgttcagtgt cagtccgatc tttgccaacc atgtcacgag cagctgttga
      121 cagtgctcca ggagcaatac cgcaaaaatc accctgcggg cattttggga agttcttgcc
      181 actgctgacg cagcttctcc aattgagcct ccgacccgtt aagtgatcgc atttggaaac
      241 gaaaacgctg acgatggtga tacagccgct gtctctcctt ggcgaagtct tctgctggaa
      301 tgtggctcag cacttctacg gcttcggcct ccgttaacgg tctgtccagg agttcccagg
      361 ccccgaggcg atgtagggtg cgcttggttt ggcccttttg acctgtggtc cgtagcaacc
      421 gccgctgggt gtcacgaaag tggctttcaa gtccattgtt ggtctgagct agacctgcca
      481 cctcataaca atggaataag cccggccaat agctttgact cacggtgtcg agatgctcag
      541 agaaggcgtg gagcaggggt gagaggttcc gttggtgata cagcgcatcc agatagccgc
      601 tcaggtgacc agcaacttgt ttcgccctca ggccaggttc agcagagagg gcgaggatat
      661 cggcaatatc gcgtagccaa accgctccct gttggagctc ggcataggtc tgggcaaagg
      721 gtgccagggc ctctttgagg ccttgataga gctttaccag gcgcaggtcg aggcgatggg
      781 ttaacaagtc gaaactcaag ccgacgatcc cttgcaggcg ttcataggtc tcaagacctg
      841 ccaagcgaaa aggggggcga cccttgagcg tgagcagata gcgggtgggg gcgaacaagt
      901 ggttgacgag ctcgtccgcc ttggccgtat cgccgcgctc acgccccaga ccttcagagg
      961 cggcccatgg cgccaggggc gggtcggcac tcagctcggg gagtatgccg gtgacggtta
     1021 agaccccatt gggcgcatca cccgcgatgg cctcttgacg gatcaacgag ccgacctggt
     1081 ctcgtacgga tttgcgcacc tcgcttttaa aggccgtatc tgcatcggct aaaggcgtag
     1141 ctaagttgcg cagatagtgg gcctgacaga attgatgcgg acgcttggga aagacactgg
     1201 ctaccgccgg aactaaaccc gtctgtttgt cgctgaggat ggccaaaatg ggccaatcga
     1261 gccgacgcag gggagctaga aacgcttcaa aggccgcttg gctctgttga gcgagccagc
     1321 cacttcgcag ggtcaggccc gtcagcaagt cccgaacaaa ccacagttgc ggctcccccg
     1381 cctcgggttc aagtccatcg agagcgatga tgatgccccc ttgctgcctg gccacctgcc
     1441 ccagacggtg gtgttgttga cgctgatggc aggctagaag cggtagatat atctgttggt
     1501 agagataacg cacatgagag gtagagatgc gaatctgacg gctgaggtcg gcttgaatct
     1561 ggtcatcagt agcttgatag gtcttgcgca accagccaat gcgggctaag acatcatagc
     1621 cataggtgga gttggctatg gcaagacgtt gaccatgggc ggataacaag cgcatctcaa
     1681 agccaggaca cgtcggccgt ggacagtgcg ccggtcggct cgcaatggag agcacttgat
     1741 ccagagtttg caccgtttta tcccaagcca ggtagttgca gccgaccagt aggtcgccac
     1801 agcttggaca agtcagcaac tccgagtggt agatgcggcg ttgttgggca tataatggct
     1861 tcggggttcg catgggtatc tcctgataaa gagagtctat tggacccatg ataacccctc
     1921 ttttcatgca cagggtgatt tttgcggtat tgcgaatata agcctgttcg cgtcgccgtg
     1981 agcgcctttt tccggaatgg caataagttc ggtggtaagg taggcggcag acaccggctc
     2041 ctatctggaa cggtcaggca aattaaacca ca
//
LOCUS       DASQSL010001960         1464 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_201331, whole genome shotgun sequence.
ACCESSION   DASQSL010001960 DASQSL010000000
VERSION     DASQSL010001960.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1464)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1464)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1464
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201331"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            161..1180
                     /gene="trpD"
                     /locus_tag="VE844_19790"
     CDS             161..1180
                     /gene="trpD"
                     /locus_tag="VE844_19790"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020565440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HZC03507.1"
                     /translation="MNICAAIHALIEGRDLTAEEMTAVVRQIMGGEATPAQIGGFLVG
                     LRMKGETVEEITAAAKVMRALALSVELPKQYLVDTCGTGGDGLHTFNISTTSAFVVAA
                     AGGRVAKHGNRSVSSCSGSADVLEAVGVKIDLDPRQVTRCVEEVGIGFLFAPLHHNAM
                     KHAIGPRRELGIRTLFNLLGPLTNPAGAPNQLLGVYSAEWLEPLAQVLRNLGSRHVLV
                     VHAKDGLDELSLSAPTQVAELYQDHVHCYTVTPEQYGFARADLASITVHSAEESLTLM
                     YAVLDNTPGPALDSVLLNAGAAIYVAGLAESLQLGIDQARRAIASGAARDKLQALIDF
                     TRQVY"
     gene            complement(1161..>1464)
                     /locus_tag="VE844_19795"
     CDS             complement(1161..>1464)
                     /locus_tag="VE844_19795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013219727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="protein YgfX"
                     /protein_id="HZC03508.1"
                     /translation="WVQAFRWHVQHRGDAIRALDATAEGEWIVTTARRGKCRGTLARD
                     SVVLPWLTVLTFKLEDGRRRSVVLLPDNVDVHSFRRLRVRLRYPMEPEKEANKPGE"
BASE COUNT          312 a          415 c          427 g          310 t
ORIGIN      
        1 ttggacacct atggaagtcg gtgaatgtac tacattatgt ccaattatat ggatagaatg
       61 atcgggaagc ggagaggcaa aaaggtatct taattagcca agtggcttgc tattgtcctc
      121 aatgtatatt aaaaatcaaa ggatacacag ggataactcc atgaatatat gcgcggccat
      181 tcacgccctc attgagggcc gggatcttac cgccgaggag atgaccgcgg tggtgcgcca
      241 gatcatgggg ggagaggcca cgcctgccca gatcggcggt ttcctggtcg gactgcggat
      301 gaagggcgag acggtggagg agatcaccgc ggcggccaag gtaatgcgcg ccctcgccct
      361 ttctgtcgag ctgcccaaac agtatctggt ggatacctgc ggcacgggcg gggatggcct
      421 ccataccttc aacatctcca ccacctctgc ctttgtggtg gccgcagccg gcgggcgagt
      481 ggctaaacat ggcaaccgct cggtctcgag ctgctctggc agcgccgatg tcctggaagc
      541 ggtcggggtc aagatcgatc tcgacccccg gcaagtgaca cgctgtgtag aggaggtagg
      601 gatcggtttt ttgtttgctc ccttacacca caacgccatg aagcatgcga ttggaccgcg
      661 ccgcgaactc ggcataagga cgttgttcaa tctcttgggg cccttgacca atccagccgg
      721 tgcaccaaat cagctgttag gtgtctacag cgcagagtgg ctggaacctt tagcccaggt
      781 gctcagaaat ctcggtagcc gccacgtact ggtggtgcat gccaaggatg ggctggatga
      841 actgagcctg agtgccccca cccaagtagc cgagctttat caggaccacg ttcactgcta
      901 taccgtgaca cccgagcagt atggttttgc ccgggccgat ctcgcgtcga ttaccgttca
      961 tagcgccgag gagagtctga cgcttatgta tgcagtgctg gataatacgc ccggcccggc
     1021 cctggacagt gtgttgctca acgcgggtgc ggcgatctat gtagcgggct tggcagagag
     1081 cctgcaacta ggcattgacc aggcgcgccg ggccatcgcc tcgggtgcag cccgagacaa
     1141 acttcaggca ttgatagact ttactcgcca ggtttattag cttctttttc tggctccatg
     1201 ggatatctta atctcacccg caagcggcga aagctatgca catcgacgtt atccggcaac
     1261 aacaccaccg atcgacggcg gccgtcctcg agtttaaatg tcaacaccgt aagccaaggc
     1321 agaaccacgc tgtctcgtgc cagcgtcccc cggcacttac ctcgcctggc ggtggttact
     1381 atccattcac cctcggcggt ggcgtcaagc gctctgatcg catcgccgcg gtgctgtaca
     1441 tgccaccgga aggcctgaac ccag
//
LOCUS       DASQSL010001961         1372 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_94213, whole genome shotgun sequence.
ACCESSION   DASQSL010001961 DASQSL010000000
VERSION     DASQSL010001961.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1372)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1372)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1372
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94213"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(54..866)
                     /locus_tag="VE844_19800"
     CDS             complement(54..866)
                     /locus_tag="VE844_19800"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HZC03509.1"
                     /translation="MPARTITIANNKGGTGKTTTAVNLSAGLAFQKGYRVLLIDFDPQ
                     GNASISLDIDIENLKHSVKDLLGNSNYPAQNLLWKKGETLRILPANSTLKDVEPELLG
                     SVDGRLRLRARLAPIVEEFDYVIIDTPPTTGIFTQAPLIASHEVLIPVDVGYFSLQGI
                     RQLLEEIAKVREHFNPDLQIAGILLTKFDSRTTFSHQVEKTLRKSFGDLAMKTMIRIN
                     IDLVRAQVDRQSIFAFDPNCAGAHDYQNLVNELVGNVVSFPKEKKRRAVSGV"
     gene            complement(1039..>1372)
                     /locus_tag="VE844_19805"
     CDS             complement(1039..>1372)
                     /locus_tag="VE844_19805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03510.1"
                     /translation="ANGKQVRRWLQGKKAGWYAVLAVPEMPVTSTLLDQAHNAINRKL
                     FMMKGFHHPHGSQQAFLTGLAHLYNLVPYQRRAQHAGQWGVEVEGGRLPTRDWFLNLQ
                     ILTSGGFQ"
BASE COUNT          291 a          396 c          349 g          336 t
ORIGIN      
        1 tttctttgag taaccgcccc atgttctcaa ggccgcgctc ggactgactc gccttagacg
       61 ccactcaccg ccctcctttt cttctccttc ggaaagctca cgacgttccc cacgagttcg
      121 ttgacaaggt tttggtaatc gtgggcaccg gcgcaattcg ggtcgaaggc gaaaatgctt
      181 tggcggtcta cctgagcgcg tactagatcg atgttaatgc ggatcatggt cttcatcgct
      241 aggtcaccaa agctctttcg aagtgttttc tcgacctgat gcgagaatgt cgtgcgcgag
      301 tcgaacttcg taagcaggat ccctgcgatc tgtaggtctg ggttaaagtg ctcccgaacc
      361 ttggcgatct cctctaaaag ctggcgaatc ccctgcaagc tgaagtaccc cacgtcaacc
      421 gggatcaaca cctcgtggct cgcaataagt ggcgcctgcg tgaatattcc ggtcgtcggc
      481 ggcgtgtcga tgatgacgta atcaaattct tccacgatcg gcgccaaacg cgcgcgaagc
      541 cgtagccgcc catcgacgct cccaagcagt tccggctcaa cgtcctttag cgtgctattc
      601 gccggtaaaa tgcgaagcgt ctcccccttt ttccagagta ggttttgtgc ggggtagttc
      661 gagttcccga gcagatcttt aacagagtgc ttcagatttt caatatcgat atccagcgaa
      721 atgcttgcat tcccctgtgg gtcgaagtcg atgagcaaga cccgataccc cttttgaaac
      781 gccaacccag ccgacaaatt caccgcggtc gtggtcttcc ccgtcccgcc tttattattc
      841 gcaatggtga tagttcgagc aggcacgccc gtctcctctc acgaggtatt acaaacgaat
      901 ggaacaattt tatgagtgcc cacctcattg taataaacgc ctttcgcgat ttcaccgaaa
      961 aattggcatt gtcaagtaac ggtgatctcc gaaaaggtgc acattccacc cgatttagtg
     1021 gtggagtgtt tcagccgttc actgaaaacc tcccgaggtg agaatttgga ggttgaggaa
     1081 ccaatcgcgt gtcggtaatc gcccgccttc cacttccacg ccccactgac ccgcatgctg
     1141 ggcgcggcgc tgatagggca ccaggttata taagtgcgcc agccccgtca gaaatgcctg
     1201 ttggcttccg tggggatgat ggaacccttt catcatgaac agcttccggt tgatggcgtt
     1261 atgggcttga tccagcaggg tactggtcac gggcatctca gggactgcaa gcaccgcata
     1321 ccagcccgct ttcttgcctt gcaaccagcg ccgcacctgc ttgccattgg cg
//
LOCUS       DASQSL010001962         1015 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_38309, whole genome shotgun sequence.
ACCESSION   DASQSL010001962 DASQSL010000000
VERSION     DASQSL010001962.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38309"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(201..>1015)
                     /locus_tag="VE844_19810"
     CDS             complement(201..>1015)
                     /locus_tag="VE844_19810"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HZC03511.1"
                     /translation="PLFRYFPTYLRAVTSYFEELWEKAESMALFIEDLQDAVDFARAK
                     VDYESNWLAIYEYALAKEDEGMKTIELARVEEVLREEVRGRNLAIARYLDVGTCTGRY
                     PIELRSWVTQTGKILGVDEDYDCVRFAQANIEQKCPDEERIEISQRDFVAREVGIKGE
                     FDLITCMLGTLSHFGWDRSRTYDDSIQRALARMASLLSGEGLLFLGTWSEYACKNRNM
                     LGIYRQGDRARLAEWTPSATELEDRLRSVGLNVVGQVQPEMRLDLTWCRRAH"
BASE COUNT          211 a          337 c          257 g          210 t
ORIGIN      
        1 caccggagcg cgatcccgac ggcgcagcag tgctgggctg gcagctggcg ggcatcgggg
       61 tgatcgctgc actcgtcgcg ctgctgcacc gccacggtcg tcgcgacctg ccggactgag
      121 cctcgatcca gcgcccatac cgtagccggt aagaggtgag tctttgaacc gaggcgaggg
      181 gccacgatag gcgacaggcg ttagtgagca cgccgacacc acgtcaggtc cagcctcatc
      241 tcgggctgca cctgcccgac cacgttcaag ccgacactcc tgagccgatc ttccaactct
      301 gttgcgctgg gcgtccattc tgcaagccgc gctcgatccc cctgccggta gatcccaagc
      361 atgttgcggt tcttgcatgc gtactccgac cacgtcccca aaaacagcaa cccctcgcca
      421 ctaagtaacg aggccatccg agccaatgct ctctgaatag agtcgtcgta ggttcgcgag
      481 cgatcccatc caaaatgcga caacgtcccc agcatacagg tgataaggtc aaactctccc
      541 ttgataccca cctcgcgggc aacgaaatca cgttgggaga tttcaatcct ctcctcgtcg
      601 ggacacttct gttcaatgtt cgcctgtgcg aaccgcacac agtcataatc ttcgtccaca
      661 ccgaggattt tccctgtttg cgtcacccac gaccgtagct cgatggggta acgaccggta
      721 cacgtaccca catccaagta ccgcgctata gcaagatttc ggccccttac ctcctctcgc
      781 aggacctcct ccaccctcgc aagttctatg gtcttcatcc cttcgtcttc tttggcgagg
      841 gcatactcgt aaatggcgag ccagtttgac tcatagtcaa cctttgctct ggcgaagtcg
      901 acagcgtcct gcagatcttc gataaacaat gccatcgact cggccttttc ccacagctcc
      961 tcgaaatagc tggtgaccgc cctcagatac gtcgggaagt atcggaagag gggag
//
LOCUS       DASQSL010001963         1008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_201395, whole genome shotgun sequence.
ACCESSION   DASQSL010001963 DASQSL010000000
VERSION     DASQSL010001963.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201395"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..627
                     /locus_tag="VE844_19815"
     CDS             <1..627
                     /locus_tag="VE844_19815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03512.1"
                     /translation="IAELLRREHGYVPSQVEEEVYYQFADGWSAYLLYKMLDNGQVLR
                     LFIDQSDAGHPTQIIQHWNHAYGYTAHHLAIRASRLEQGTRVAVTLDEMIQTLSERGI
                     SIMEATGYYTDGLLLQVFTRPERTTRIPEGIRERLAQYGTGLENKIENGKLLELVSRK
                     EMPVEFAQRFYRLYGLNFELENPRHSAPVYPYFLPEQAAHVIRTSLVT"
     gene            complement(804..896)
                     /locus_tag="VE844_19820"
                     /pseudo
     CDS             complement(804..896)
                     /locus_tag="VE844_19820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018411544.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3365 domain-containing protein"
BASE COUNT          210 a          297 c          283 g          218 t
ORIGIN      
        1 atcgccgaac tcctgcgccg tgaacacggt tacgtgcctt cgcaagtcga agaggaagtg
       61 tactatcagt ttgccgacgg ctggagcgcc tatctcttgt acaagatgtt ggacaatgga
      121 caggtgctgc gcctcttcat cgatcagtcc gatgccggcc acccgaccca gatcatccag
      181 cactggaacc acgcgtatgg ctacacggcc caccatctgg cgatccgggc gagccgtctc
      241 gagcagggga cgcgagtcgc cgtaaccctc gacgagatga tccagaccct ttcggagcgc
      301 gggatcagca tcatggaggc gaccggatat tataccgacg ggctactgct gcaggtcttt
      361 acccgcccgg aacgcacgac tcgcattcct gaggggatca gagaacggct cgcgcagtat
      421 ggtaccgggc tcgaaaacaa gatcgagaac ggcaagctgc tggagctcgt ctcccgcaaa
      481 gagatgccgg tggagtttgc gcagcgtttt taccggctct atggcctgaa ttttgagctc
      541 gaaaatccac ggcattcggc cccggtctac ccctatttcc tacccgagca ggccgcccac
      601 gtcatccgca cctcgctcgt cacttagatc tggcggccct cacccaagac gccgctctgt
      661 gcccttgcgg tgcaacggat ctgtaacgac gtgatggagc gagggtagag accacgcggg
      721 ttgccggtta tactctttgc tatccgatcc ggtcgtcgag gcagccaacg tacgccggct
      781 gtcacgccat tgcggcaggg tcatcaaccc ttgatcggga tacggatcac aataccgccc
      841 atcacatcgt tcagcttgaa gtccttgcgc gggctgtcct tatggttgtt gtggcaggtg
      901 ctggttcgta cccagaaatt ttctgaaaag ggtaaagctc cgcctaccct catagaaata
      961 tagagagtta gggttgtttt tttatggatg gtcaactact gtgcgatc
//
LOCUS       DASQSL010001964         1444 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_38315, whole genome shotgun sequence.
ACCESSION   DASQSL010001964 DASQSL010000000
VERSION     DASQSL010001964.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1444
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38315"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            2..100
                     /locus_tag="VE844_19825"
     CDS             2..100
                     /locus_tag="VE844_19825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006325341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3096 domain-containing protein"
                     /protein_id="HZC03513.1"
                     /translation="MIGILILLVPRFLNYFVAVYLIVVGILGLVPR"
     gene            317..>1444
                     /locus_tag="VE844_19830"
     CDS             317..>1444
                     /locus_tag="VE844_19830"
                     /inference="COORDINATES: protein motif:HMM:NF033517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HZC03514.1"
                     /translation="MLTREEIRAVYDQGPEAVIALVERLCAQITELAARVKELEDRLA
                     TNSRNSSKPPSSDGPAKQTRSLRQPSTKKSGGQPGHPGTTLKQVAEPDQVLTHAPQQC
                     ASCGKALTEVAGRLAEERRQVFELPPLKLVVTEHRVVLKECPRCGQENIGAFPEGVTD
                     GASYGPGVKGLLISLNQEHLLPCERSCQIFADWFGQPVSEGTLAAAVTFCAQELAETE
                     GCIKQGVIDSEVAHFDETGMYVEGKRGWLHTASTPQLTHYAYHAKRGSTATEDIGVLP
                     EFGGRAIHDAFRAYWQYDCEHGLCNAHHLRELSFVHEQMRRAWAGEMKQLLLDIKRAV
                     DIAKAQNQTRLENKAIKEYEQRYAAVLQAGAQEENKHPPPAT"
BASE COUNT          300 a          398 c          467 g          279 t
ORIGIN      
        1 cttgataggc atattaatcc tgcttgtgcc caggttttta aattatttcg tggccgtgta
       61 tttgattgtc gttggtatcc tggggctggt gcctcgatag ccgcacgggg ggcaaactcc
      121 gcaccgcgct gagcgaaggt gaggtgtcgc tcagccaccc gtggaagtcc atcacattcc
      181 cgtcctctga gggcaaatga tacaaggctg gctcggtctc cccaatgacg aaggcctttc
      241 ctctcgtaac tactcagccc ctctgttcat gagctaacag acggacaggg caagaaactt
      301 ttggtaagct tgcgctatgc tgacccgtga agagatcaga gctgtctacg accaaggccc
      361 agaggcggtg atcgcgttgg tcgagcggtt gtgcgcgcag attactgagc tggcggcacg
      421 agtcaaagaa ctggaagacc ggctggccac caatagccgc aatagtagca agccgccgtc
      481 gagtgacggc ccggccaagc agacgcgttc gctgcggcag ccttcgacca aaaagtcggg
      541 tgggcagccg ggtcatccgg gcacgacgct gaaacaggtc gcggagcctg accaggtcct
      601 cacccacgcg cctcagcagt gcgcctcctg tgggaaggcg ctcactgagg tggcaggccg
      661 cttggccgag gagcggcgac aggtctttga gctgccgccc ttgaagttgg ttgtgactga
      721 acatcgcgtt gtcctcaaag agtgtcctcg ctgcggtcag gaaaatatcg gggcttttcc
      781 ggaaggggtg accgatggag ccagctatgg ccctggggtc aagggcttgc tgatctcgct
      841 caatcaggag catctgctgc cgtgcgagcg cagctgtcag atctttgcag actggtttgg
      901 ccagcctgtg tcggagggga cgctcgcggc ggctgtcacc ttttgcgcgc aggaactggc
      961 cgagaccgaa ggatgtatca agcagggggt gatcgactcg gaggtggccc acttcgacga
     1021 gacggggatg tatgttgagg gcaagcgcgg ctggttgcat accgcgtcca cgccacagtt
     1081 gacccattat gcctaccacg ccaaacgggg gagtacggcg accgaggaca ttggggtctt
     1141 gcctgagttt ggcggacgcg ccatccacga tgccttcagg gcctattggc agtatgactg
     1201 tgagcatggg ctgtgcaacg cccaccacct gcgtgagctg agcttcgtcc acgagcagat
     1261 gcggcgggcg tgggccggcg agatgaagca gttgttgctg gacatcaagc gcgccgttga
     1321 tatcgccaaa gcgcaaaatc agacgaggtt ggaaaacaag gcaattaaag agtacgaaca
     1381 gcgctatgcg gcggtcctcc aggcgggtgc gcaagaagag aacaaacacc cgcccccggc
     1441 caca
//
LOCUS       DASQSL010001965         1615 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_38324, whole genome shotgun sequence.
ACCESSION   DASQSL010001965 DASQSL010000000
VERSION     DASQSL010001965.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1615
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38324"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            238..1467
                     /locus_tag="VE844_19835"
     CDS             238..1467
                     /locus_tag="VE844_19835"
                     /inference="COORDINATES: protein motif:HMM:NF016847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03515.1"
                     /translation="MIVEPSRDWNVFKQIFVDHWDGFKQFRPRYDTPYYESLVDKMLD
                     CGNPDKMGYIEYRCLDCGQGKHRVSMSCKSSLCLRCAKVYVDNWVSQVSKVLHEGVIY
                     RHIILTVPAMFRTPFYQSAEVLLSELMRCGRQCLDDFYSEVRGKALKGGYISVIHTHG
                     RNGQYHPHLHVIATSGGYDDQAESWEHLTFLPYDLLRHKWQWHLMKMLRRTLPSETIE
                     PLVQLCYKKYPKGLVSRVQKGKVPSQYQSLASYVAKYVVSPPISVRRIDRYDGERVTY
                     HYKSHRTARTEHETVDVMTFIGRMIQHTLPKGFKRIRYYGVQATKTFAKVKEVIQRAL
                     AKVEGVVKGAVKIIARLSYRERYEKSTGRDPLICPHCGGEMGLWRVWHPTYGVVYDEG
                     EVIKRGTYELTTQPAGP"
BASE COUNT          370 a          395 c          480 g          370 t
ORIGIN      
        1 atgcagctgc cctaaaggga tattgtgggg cggtttctcc tagtttctta aaatccaaat
       61 attttaatcg tataggattt ttcattttcc ggcttcccag aagtccccat gattccaggg
      121 tggggaggtg gtgaacgcac cccggtgaag accgatgagg gggggtagat ccagagcgtc
      181 aaacgtggta aaacgctcta ttcccaacag cccaacatcc tccctcggtg cgatctgatg
      241 attgttgaac cttctcggga ctggaacgtc ttcaaacaga tctttgtcga tcactgggat
      301 gggtttaaac aattccgtcc tcgctacgac acgccctact atgagagtct cgtcgacaag
      361 atgctcgact gcggtaatcc cgataaaatg ggctatatcg agtatcgctg tctggattgt
      421 ggtcaaggca aacatcgggt gtcgatgagt tgtaaatcgt ctctgtgctt gcggtgcgcc
      481 aaagtctacg tcgacaactg ggtcagccag gtgagtaagg tcctgcatga gggggtgatc
      541 tatcgacaca ttatcctgac ggtgcccgcc atgttccgca cccccttcta ccaaagcgct
      601 gaggtgttgt tgagtgagtt gatgcggtgc ggaaggcagt gtctcgatga cttttacagc
      661 gaggtcaggg gcaaggcgct caagggtggc tatatctcag tcatccacac gcatgggcgc
      721 aatggtcaat atcatcccca cctgcatgtg atcgcgacca gtgggggcta cgatgatcaa
      781 gccgagagct gggaacattt gacttttttg ccttatgatc tgctgcgtca caagtggcaa
      841 tggcatctga tgaagatgtt acgccggacc ctgccgagtg agacgatcga gccgttggtg
      901 cagttgtgtt acaagaagta tcccaagggc ctggtgagcc gagtgcagaa aggcaaagtg
      961 ccgtctcagt atcagagttt ggcgagctat gtggccaagt atgtggtgag cccgccgatc
     1021 tcggtgcggc gcatcgaccg ctatgatggc gagcgggtga cgtaccacta taagtcccac
     1081 cgaacggccc ggaccgaaca tgaaacggtt gatgtgatga cgtttattgg ccggatgatt
     1141 cagcataccc tgcccaaagg gttcaagcgc atccggtatt acggcgtgca ggccaccaag
     1201 acctttgcca aggtgaagga ggtgattcaa cgggcgctag ccaaggtcga gggtgtggtc
     1261 aagggcgcgg tgaaaatcat tgcccggctg agctatcgag aacggtatga gaagagcacg
     1321 ggtcgagacc cgctgatctg tccgcactgt gggggcgaga tggggttgtg gcgcgtctgg
     1381 cacccgacct acggggttgt ctatgacgag ggggaggtga tcaagcgagg cacatatgag
     1441 ttaaccacac aaccagctgg cccttgataa tggccctggt attgaaaagt ccgcccggag
     1501 ggcgctatgt tcagacaaga atgtacgcag gatggtgacc cttttccccg cctgtacaag
     1561 caaatcgaaa acaattcttt gcttgcttcc ggcattgacc ctcaccggcg ggaac
//
LOCUS       DASQSL010001966         1347 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_163882, whole genome shotgun sequence.
ACCESSION   DASQSL010001966 DASQSL010000000
VERSION     DASQSL010001966.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1347)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163882"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(23..235)
                     /locus_tag="VE844_19840"
     CDS             complement(23..235)
                     /locus_tag="VE844_19840"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZC03516.1"
                     /translation="MQHHFHPRPAFEYIAHGRAIIASDLPVLREVLGDRVNSLLCPPD
                     DRAAWEEAVAELAEPPSGGQTRCLKT"
     gene            352..1317
                     /locus_tag="VE844_19845"
     CDS             352..1317
                     /locus_tag="VE844_19845"
                     /inference="COORDINATES: protein motif:HMM:NF013694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HZC03517.1"
                     /translation="MTSITVVEFDFENRRERTIPMEEARAACDKGLCCWIDVDLGDGR
                     IAEKALRQMNINDVAIEEALTHPRGGRYDVYDKCLHAALAAPRFANGRLSVSYVDLVI
                     GERFIITLHRGRVDFLEQMRRSYQHFFIAFAETLGFLLFELWDRLIDSYRKGLLKLED
                     EVEQIQSCILGELDDSIFQRVAEVTQDLLTLRKNVLADREVLQELALRRSKFVSPSTQ
                     PYLSNMVGTLERLASDLRTEREILAETLNLYLGIVSHRTNRIINRLTLLSAIFLPLTL
                     LCGVYGMNFRILPELEWEFGYLFFWVLVMLITGGLVTFIKIKHWL"
BASE COUNT          288 a          369 c          392 g          298 t
ORIGIN      
        1 cgtgttgatc tttaaagttg agtcaagttt tcaggcagcg agtttgacct cctgaaggag
       61 gctctgccag ttcggcgacg gcctcctccc aggcggcgcg gtcgtcggga gggcaaagca
      121 ggctgttgac tctatcgccg aggacctcac gcagcaccgg aagatcggag gcgatgatcg
      181 ccctcccgtg ggctatgtac tcaaacgcag gccgggggtg aaagtggtgc tggataccgg
      241 tgaggctgta taggcgtcct gcctatccgg acagtttatt tgctctctac acactcgctc
      301 ccggctaccg ttgacgtgga agaaaaagtg cgttagaaat tcctatccat catgacatcg
      361 atcaccgtcg tcgagttcga cttcgagaat aggcgcgagc gaaccattcc catggaggag
      421 gcgcgcgccg catgcgataa gggcctctgc tgctggatcg acgtagactt gggtgatggc
      481 cgaatagccg aaaaggcgct gcgccagatg aacatcaacg acgttgccat cgaagaggcc
      541 ctgacgcacc cgcgaggcgg ccgctacgac gtctatgata aatgcttgca tgcggctctt
      601 gcggccccgc gtttcgccaa cgggcggctt tctgtctcat atgtcgattt agtcatcggg
      661 gagcgattca tcatcacgct gcatcgcggc cgcgtggatt tcctggagca gatgcggcgc
      721 agctatcagc acttttttat cgccttcgcc gagaccctcg gcttcctgct gttcgaattg
      781 tgggaccgat tgatcgatag ctatcgcaag gggctgctta aactagagga cgaagtagag
      841 cagatccaaa gctgcatcct gggcgaattg gacgacagca tcttccagcg tgtcgcagag
      901 gtcacgcaag acctgctcac gttacgtaag aacgtactgg ccgaccgtga ggtcctgcag
      961 gagttggcgc tacggcgatc gaaattcgtc agtccatcca cacaaccgta tttgagcaac
     1021 atggtgggaa cgcttgagcg gctcgccagt gatctgcgca ccgagaggga gatcctggcc
     1081 gaaaccctaa atctctacct cggcatcgtc agtcaccgga cgaatcgtat catcaaccgg
     1141 ctcaccctac tcagcgctat cttcctacca ctcacgctcc tgtgcggcgt ttatggaatg
     1201 aatttcagga tcctgccaga gttggagtgg gagttcggct acctgttctt ttgggtgctg
     1261 gtgatgttga tcacgggcgg cctggtgacg ttcatcaaaa tcaagcactg gctgtaaatt
     1321 ggcccagtga aagcatagct gacacga
//
LOCUS       DASQSL010001967         1255 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_163884, whole genome shotgun sequence.
ACCESSION   DASQSL010001967 DASQSL010000000
VERSION     DASQSL010001967.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1255
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163884"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            587..1159
                     /locus_tag="VE844_19850"
     CDS             587..1159
                     /locus_tag="VE844_19850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014934983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HZC03518.1"
                     /translation="MPRQYQREPLSTEEANRLIQACETLREKQVIMTLLDTGLRVSEL
                     ARLTKQNILWQERRLAIYGKGGPYGKQSKRRVLPMTERVRQLLEHHYTMADTFGITAR
                     QIERIVKRVANRAGIAKPVTPHVLRHTFSVTCLRRGITTRTLQYLLGHDRITTTEIYR
                     TCRRKMRFESFRASGSADVRRGTDSLTRKP"
BASE COUNT          290 a          364 c          340 g          261 t
ORIGIN      
        1 tggaacaaag tccgttgcgg tgttgtcctg cgcgtgcgcc gggcaaacag ggactgacac
       61 cagaaccgac accaagccac aggcggctcc gactgtcaaa agcatctgct tcttcatggt
      121 tgcatgctcc tttctctata ctctgaattg tgaacaatgt actagaatcg gggatttcag
      181 gccattcatc ggcccgaggt acctgtaggt gcgcgagaac ataaacgccg atacctgaga
      241 acgaagcatt tttctgcgca cgctttttga gaatgagatg agccgcgtac ctgagaacag
      301 cagtattctg tgcgagaata tcttttcctg cctgagaaca tcctcctctg cgcacgcttt
      361 ttgagaatca acacgtgcat ctcggatgtc gctttctgcc cttaaaggcg acatggcctc
      421 gtcccctcga acgaaaaccc ctgatttgat ccagcctggc acctatcgaa aagcgactta
      481 atgtcgcttt tttgtactat aatcgacata aggggcggtt cggggatgcc gcaaaggaca
      541 ggaccccgag gtctcaggga ggttctatcg ataacagcgg tcgccgatgc cacgccagta
      601 ccaacgcgag cccctctcca ctgaggaagc caaccggctc atccaggcgt gtgagacgct
      661 gcgtgagaaa caagtgatta tgacgctcct cgataccggg ctacgcgtct cggaattagc
      721 gagactgacc aaacagaaca ttctatggca ggagcgacgc ttggccatct atggcaaggg
      781 cggcccctac gggaagcagt ccaagcgccg cgtgctaccc atgaccgagc gcgtccggca
      841 gctgctcgag caccattata cgatggcgga tacctttggc atcacggccc gccagatcga
      901 gcggatcgtg aagcgcgtgg ctaaccgcgc cggcatcgcc aagccggtga ccccgcatgt
      961 gttacgtcat acgttctccg tcacgtgctt gcggcgcggt attacgacac gtaccctgca
     1021 atatctctta ggacacgatc ggatcacgac cacggagatc tacagaacct gtcgccggaa
     1081 gatgcgattc gagagtttca gagcaagtgg tagcgcggat gtccgtcgcg gcacggatag
     1141 cttgacccgt aaaccctgac tcacgcaacc gatggtgact ggagctagcg catgactcaa
     1201 attcccggcg acgttttagc ggagttgcgc agcaacttag cccgtctagc gcccc
//
LOCUS       DASQSL010001968         1019 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_81752, whole genome shotgun sequence.
ACCESSION   DASQSL010001968 DASQSL010000000
VERSION     DASQSL010001968.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81752"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            413..>1019
                     /gene="phoU"
                     /locus_tag="VE844_19855"
     CDS             413..>1019
                     /gene="phoU"
                     /locus_tag="VE844_19855"
                     /inference="COORDINATES: protein motif:HMM:TIGR02135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HZC03519.1"
                     /translation="MVDFSEVKIEEECLKVIALNQPVADDLRFLVTLIRANHDLERIS
                     DQAASMAKIARRVSTMGIEPYGDAWRDMSRQVYDMVESSLHALLHQDHAAARHIWQRD
                     KHIDTLRDELTRRLRRDILAQHSDDQTRFELLEAVYRLERAADHATNIAKAVLYLVLG
                     QIVRHRGREFRRKVSGEKTRILFVCIHNSARSQMAAAWLNRL"
BASE COUNT          239 a          281 c          293 g          206 t
ORIGIN      
        1 cggcgaaacc gagaaactgt ttcagaatcc ggataaggtg gaaacccgag actatatcac
       61 cggacgtttc ggctaggaca cgccggccgg ccggcgtccc ccagcggttg aaacgctgta
      121 aagccatgcc tggtcagcgt gaccaaccga tagaccattt gcggaacgca ggtccaggcc
      181 gacccgcgtt ccggttgcgt gggatcaagt catcgtggac gtggacaatg tcacatcgtg
      241 gaccatgtaa ggaatgacgc gatatgcgga aacattttca gagcgaactc agtcagattc
      301 aggagcacgt caccgagttg ggacggcggg ttctggaaaa cattgaggcg gcgtctcagg
      361 ccgttctgga ggccaatgtc gagcaggcag aaaccgtgtt agatcggagc atgtggttga
      421 cttttcggaa gtcaaaatcg aagaagagtg tctcaaagtc attgccctca atcaacctgt
      481 cgcagacgat ctgcgatttc tcgtcaccct catccgcgcc aatcacgacc tagagcggat
      541 tagcgaccag gccgcgagta tggccaagat tgccaggcgt gtatcgacaa tgggaattga
      601 gccctatgga gacgcctggc gcgacatgag ccggcaggtc tatgacatgg tcgagagcag
      661 tctgcacgct ctgctccatc aagatcatgc tgcggcccgt cacatttggc aacgcgataa
      721 gcacatcgat accctgcgcg atgagctgac aaggcggctt cgccgcgata ttttggctca
      781 acattcggac gatcagaccc gattcgagct gctcgaggcg gtctaccgtc tcgaacgcgc
      841 tgccgaccac gccaccaaca tcgctaaagc ggtcctgtat ctggttcttg gacagattgt
      901 ccggcatcgc ggccgggaat tccgacgcaa ggtgtctggc gagaaaacac gcattctctt
      961 tgtttgcata cataatagcg cccgcagtca gatggcagct gcctggttga atcgcctct
//
LOCUS       DASQSL010001969         1795 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_201441, whole genome shotgun sequence.
ACCESSION   DASQSL010001969 DASQSL010000000
VERSION     DASQSL010001969.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1795
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201441"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            399..1247
                     /locus_tag="VE844_19860"
     CDS             399..1247
                     /locus_tag="VE844_19860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013938204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HZC03520.1"
                     /translation="MKLFGISDLHLSYERNRQALNALPAYPDDWLILAGDIGETEAQL
                     KFALAILTRRFQQVLWVPGNHDLWTLPSDPQGHRGVAKYQRLVTICRNYGVHTPEDPY
                     VRWPGSETRCLLAPLFVLYDYSFRPDDVPAEAAIDWAAASGVLCTDEALLHPDPYVSR
                     TAWCARRCQYSEARLQEAAAHASLVLINHFPLRHDLVHLPRIPRFALWCGTRRTEDWH
                     VRFPVKAVVYGHLHQPATHMRDGVRFEEVSLGYPPDWDQAQGLQGYLREILPGRMGHA
                     LSRPDV"
     gene            complement(1460..>1795)
                     /locus_tag="VE844_19865"
     CDS             complement(1460..>1795)
                     /locus_tag="VE844_19865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03521.1"
                     /translation="GAVQLGLFGLVEVEESFNKLIDNFKLVPFIISVHDERQEWKSLR
                     ETIQLLNGTAGGIGIPTGGGLVYYPDQSIEAIRYPFSEYTERLKTYWSLYSGVMGLIV
                     GYYFGKQQQ"
BASE COUNT          385 a          519 c          471 g          420 t
ORIGIN      
        1 ggagccggct gcccctactt tgcccctggt gacacgaatg tttttgcagg gccaacaata
       61 gttgcgcatg acaccagacc ggccggaaaa cagaggaaca aaggcaccca aaacggttat
      121 aatcaattct ggcaaaggtg gcatcggcat atccccacac gttggttagc ttgtcaggac
      181 acatcgtagt cgcctttgtc actgtcttca ctgaaaaatg gccaaagtct aggtaaaact
      241 atcgtgcatt taggccaagc tgtaccagtg gtcggccaca ttgactttgc ggaataggag
      301 tcgaggcttt agccggctgg ttggcatgcc tccgcctaaa ggctcgactc cgggaccgcc
      361 cgtaacgtgg tcactagcgt ttatgtttcg gtggcagcat gaagctcttc ggcatcagcg
      421 acctacatct aagctatgag cgcaaccgac aggcactgaa cgccttaccc gcctatcctg
      481 atgactggct gattctggct ggggatatcg gggagactga agcgcagctt aagttcgcgc
      541 tggcgattct gacacggcgc tttcagcagg tgctttgggt accgggtaac cacgacctgt
      601 ggacactgcc ctcagacccg caggggcacc gcggtgttgc aaagtatcag cggttggtga
      661 cgatttgccg gaactacggc gtccacacac cagaagaccc ttatgtccgc tggccaggat
      721 cggaaaccag gtgtctcctc gcgccgctgt tcgtactcta cgattacagc tttcgccctg
      781 acgatgttcc cgccgaggcg gcaattgact gggccgccgc ctcgggggtg ctctgtaccg
      841 atgaagcgct gctgcatccc gatccgtatg tctcgcgaac ggcatggtgc gccaggcgct
      901 gccaatatag cgaagcccgg cttcaggaag ccgccgcgca tgcctcactg gtgctgatca
      961 atcattttcc gctgcgccac gatctggtcc atctgccacg catcccacgc ttcgcattgt
     1021 ggtgcgggac ccgtcgcacc gaggattggc acgtccgctt cccagtcaaa gccgtggtct
     1081 acggccattt gcatcagccc gccacgcaca tgcgcgacgg cgtgcgcttt gaggaggtct
     1141 cgctcggcta cccgcctgat tgggaccagg cccagggcct ccagggctat ctacgtgaga
     1201 ttctgccggg ccggatgggc cacgccttat cacgcccaga cgtttagtgg gtactcaccc
     1261 gctaatactt tgacaataga gtttatgcac aattggcagc cttagcttgc tgccagcgca
     1321 gggtttgagc gttgaccaag ccacagaccg ttcgcgggat tgaagtgtaa atgctatgcg
     1381 ctctctgact gcctcactaa tatatttgct catattttcg gtattggagc ttgacaagca
     1441 acagtgcaga gaatggacgt cactgctgct gcttgccgaa gtagtagccg acgataagtc
     1501 ccatgacccc tgagtacagt gaccagtatg ttttgaggcg ctcggtgtac tcagaaaaag
     1561 gatatcggat tgcttcaatg ctctgatccg gataataaac caggcctccc cctgtcggta
     1621 ttcctatccc ccctgcagtg ccatttagca gttgaatcgt ctctctcaag cttttccatt
     1681 cctgcctctc gtcatgcacg cttattataa aagggaccaa cttaaaatta tcgatcagct
     1741 tgttaaatga ttcttccact tccactaatc caaatagacc taattgtact gcacc
//
LOCUS       DASQSL010001970         1502 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_163911, whole genome shotgun sequence.
ACCESSION   DASQSL010001970 DASQSL010000000
VERSION     DASQSL010001970.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163911"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..221)
                     /locus_tag="VE844_19870"
                     /pseudo
     CDS             complement(1..221)
                     /locus_tag="VE844_19870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611868.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(236..1342)
                     /locus_tag="VE844_19875"
     CDS             complement(236..1342)
                     /locus_tag="VE844_19875"
                     /inference="COORDINATES: protein motif:HMM:NF033564.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
                     /protein_id="HZC03522.1"
                     /translation="MLPDPRPYFAELIDPRRETKNKLHKLSDIVMIVLCAVLSGIEDW
                     VGMEEFAEEKESWLRGFLELPNGIPSHDTLSDVFGRIDRKAFAEAFTRWVQAALPSLS
                     GEQVCLDGKRLCGSREGDGAVHLMSAFAAKARFVLAQQAVADKANEITAIPELLAMLE
                     LQGALVSIDALGCQKDIARQIVEAGADYVLALKDNHPTLHQDVRLYLDTESGQGRLAV
                     LETVEKDHGRIETRRYGLSTEIDWLEQKPQWAGLVAVGRVESTREVGDKTSMECRYYL
                     CSVTEVARFAEAVRGHWSTENQQHWVLDVQFGEDANRARKDHSAENLALIRRMALNLL
                     RRDSQAKDSLRRRKLRAMLSDNYRSHLLFGDMGT"
BASE COUNT          309 a          499 c          374 g          320 t
ORIGIN      
        1 ctggcacaga cagccgcgga ggcgcttggc gctgtagccc ttgtcgccga tcacccgccg
       61 tgggcgacgc cgcggtcgtc cccgtcctgg ccggcggacc gcgcctcgaa caccgtcgct
      121 tcatggtgct gaccgggcgt aagcacaatc accatcgcct tgccctggcc ctcggcgcgc
      181 agatgcactt tagtggaaaa ccccccttgg ctgtagccta gccagggcaa tcgcgctatg
      241 ttcccatgtc gccgaagagc aggtgcgagc ggtagttatc gctgagcatg gcgcgcagtt
      301 tacggcggcg caggctatct ttggcctggc tgtcacggcg cagcagattc agcgccatgc
      361 gtcgaatcaa ggcaagattt tcagcggaat ggtctttccg cgcccggttg gcatcctcac
      421 cgaactgcac atctaaaacc cagtgttgtt gattctcggt gctccagtgc ccgcgtacgg
      481 cttcagcaaa gcgcgccacc tcggtgactg agcagaggta atagcggcat tccatgctgg
      541 ttttgtcacc cacttcgcgg gtggattcga cccgacccac cgccacaagg ccggcccatt
      601 gcggcttttg ctccagccaa tcaatctccg tgctcaggcc ataacgccgc gtctcgatcc
      661 gtccatgatc tttctctacc gtctccaaca ccgccaggcg cccctgaccc gattcagtat
      721 cgaggtacag ccgaacgtct tggtggagcg tgggatggtt gtccttcagc gccagcacat
      781 aatcagcacc cgcctcgaca atttgccggg cgatgtcttt ctggcagcct agcgcatcga
      841 tcgataccaa cgccccttgc aactccagca tcgccaagag ctccgggatc gccgtgattt
      901 cattcgcctt gtccgcgacc gcctgttgcg cgagcacaaa ccgggctttc gccgcaaatg
      961 cactcatcag atgcaccgca ccgtccccct cgcgactccc acaaagccgt ttgccgtcca
     1021 gacacacctg ttcgcccgat aaactcggca aggccgcctg cacccaacgc gtaaacgcct
     1081 ccgcaaaggc cttccggtca atgcgcccga acacatcact cagggtatcg tgcgagggga
     1141 tgccattggg caactccaga aaacccctca gccaactctc cttttcctcg gcaaactctt
     1201 ccatccctac ccagtcctct atgccactca gcaccgcaca cagcacgatc atgacaatat
     1261 cgctgagctt gtggagctta ttcttggttt cacgacgcgg atcgatcagt tcagcaaaat
     1321 aggggcgcgg atcaggaagc atagataact ttcatcataa tcaaaaatga aggccacctt
     1381 acctcaggtc tttgtcaaga gctagatagc gcgattgccc tgatttcgga gccaagacaa
     1441 cttgacatat tgttttaata cacctcaggc gagtttcttc actcatttgc ataacatttc
     1501 ct
//
LOCUS       DASQSL010001971         1162 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_163926, whole genome shotgun sequence.
ACCESSION   DASQSL010001971 DASQSL010000000
VERSION     DASQSL010001971.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163926"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..>1162
                     /locus_tag="VE844_19880"
     rRNA            133..>1162
                     /locus_tag="VE844_19880"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          302 a          272 c          366 g          222 t
ORIGIN      
        1 aactagatag agcgtgtcct aagaagacct ttgagagcaa cgcgctggac gataaagtcc
       61 gcgcgacaaa actcgagaag agtcattatt ggatacttaa ccagtatcga taatgttcca
      121 gagatacaaa ttctaaacga gagtttgatc ctggctcaga atcaacgctg gcggcgtgcc
      181 tcagacatgc aagtcgaacg attaagactc tcttcggaga gtgtatagag tggcgcacgg
      241 gtgagtaaca cgtaggtaat ctacctctgg gtggggaata acagccggaa acggctgcta
      301 ataccgcata acgcagcggc accacatggt gacagttgtt aaagcggggg aacttcggtc
      361 ctcgcgcctg gagaggagcc tgcggcggat tagctagttg gcagggtaac ggcctaccaa
      421 ggcttcgatc cgtagccggc ctgagagggc ggtcggccac actgacactg acacacgggt
      481 cagactccta cgggaggcag cagtcgggaa ttttgggcaa tgggcgaaag cctgacccag
      541 caacgccgcg tgaaggatga aatccctcgg gatgtaaact tcgcaagaat gggaagaata
      601 agtgggggat aatacccccc atgatgacgg taccatttgt aagctccggc taactccgtg
      661 ccagcagccg cggtaatacg gggggagcaa gcgttgttcg gatttactgg gcgtaaaggg
      721 cgcgtaggcg gcgcaacaag tcacttgtga aatctccggg cttaacccgg agcggccaag
      781 tgatactgtc gtgctagagt gcggaagggg ctactggaat tctcggtgta gcggtgaaat
      841 gcgtagatat cgagaggaac acctgcggcg aaggcgggta gctgggccga cactgacgct
      901 gaggcgcgaa agctagggga gcgaacggga ttagataccc cggtagtcct agccttaaac
      961 gatgaatgtt tggtgtctgg agtttgagtc tccgggtgcc gtcgctaacg cattaagcat
     1021 cccgcctggg gagtacggtc gcaagactga aactcaaagg aattgacggg gacccgcaca
     1081 agcggtggag catgtggttt aattcgacgc aacgcgaaga accttacctg ggctagaatg
     1141 cccctgacag ccgtagagat ac
//
LOCUS       DASQSL010001972         1938 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_173692, whole genome shotgun sequence.
ACCESSION   DASQSL010001972 DASQSL010000000
VERSION     DASQSL010001972.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1938)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1938)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1938
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173692"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1470)
                     /locus_tag="VE844_19885"
     CDS             complement(<1..1470)
                     /locus_tag="VE844_19885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03523.1"
                     /translation="MKAGTARTGRPSQDSAGARALRRAAGLILLFNGLLVAWVLLEPA
                     GESVSALVINVAGFVGPLLVLPLCFGGLFEWTWRRGASRVDNQPAARTGQRLAPVLLG
                     MGILCYVLGQMLFTYYDLVLRQTPPFPSLADVGYLVEYPFFLLGILLLPARPIPVASR
                     ARIALDGLMNMTAALTFSWYFILGPVIQQSTGTALAKVVAAAYPLADIVLIACLVILA
                     LRPGEQALRPAAYLLALALVFYVVMDSIYGYQTLNGTYVTGTMFDVGWPVAYMLIGLG
                     AFAVRLAPTREMMTPDEPGDTLHTGFSPVEQRVWHSLLPYALIPAVGVLVFYAWRASA
                     GSGSLAAGVYLGGVTLIGLVLLRQVLTIVENARLYNRLQGTYLEMEQKNDQLVRSQHE
                     LRRQEEEVRQLNKDLEEANKELVAFSSEAETRYRTLVEQIPAITYVQEPLESSNPKAV
                     TYVRPQYETILGYPPELNKIDEEHWLTTIHPEDRERVLAE"
BASE COUNT          394 a          572 c          574 g          398 t
ORIGIN      
        1 ctcggccagc acccgctccc tatcctcggg atgaatcgtc gtgagccagt gctcctcgtc
       61 gatcttattc aactctggag ggtagccgag tatggtctca tactggggtc tcacataagt
      121 cacggctttt ggattgctag actcgagggg ctcttgtacg taggtgatgg ccgggatctg
      181 ctccacgagc gtgcggtagc gagtctcagc ctccgaggag aaggctacga gttccttgtt
      241 ggcttcctcg agatccttgt tgagctgcct gacctcttct tcttgccggc gcaactcgtg
      301 ctgcgatcgt accagttgat cgtttttctg ttccatctct agatatgtgc cttgtagccg
      361 gttgtagagc cgcgcgttct ctacgatggt gaggacctgc cgcaacaaca ccaggccgat
      421 cagcgtcacc cccccgaggt agaccccagc cgccaggctg ccgctaccgg cggacgcgcg
      481 ccaggcatag aagacgagga cacccaccgc cgggatgagg gcgtatggta gcagcgagtg
      541 ccacactcgc tgctcgaccg gtgagaaccc ggtgtggagc gtatcgcctg gctcatccgg
      601 cgtcatcatc tccctggtcg gggccagccg cacggcgaag gcgcccagtc ctatgagcat
      661 gtatgctact ggccagccta catcgaacat cgtacccgtg acgtaggtgc cgttcagcgt
      721 ctggtagccg tagatgctgt ccattaccac gtaaaaaact agggcgagcg ccagcaggta
      781 cgcggcgggt cggagggcct gctcaccggg tcgcaatgcg agtattacca agcaggcgat
      841 cagcactatg tcggccagcg ggtaggctgc ggccacgacc ttcgcaagtg ccgtcccggt
      901 actctgctgg atgaccggcc cgagaatgaa gtaccagctg aaggtgagag ccgcggtcat
      961 gttcatcagg ccatcgagcg cgatgcgcgc gcgggacgcg acagggatcg ggcgggccgg
     1021 cagcagcagg atgcccaata ggaagaaagg gtactcgacc agatagccga cgtcggcaag
     1081 ggagggaaac gggggtgtct ggcgcagtac cagatcgtaa taggtgaaga gcatttgccc
     1141 taaaacgtag caaaggatgc ccatgcccag taggacgggg gccaaacgtt ggcctgtacg
     1201 ggccgccggt tggttgtcca ctcgggaggc tccccgccgc cacgtccatt caaagagtcc
     1261 accgaagcac aacggcaaca cgagcagcgg tccgacaaat cccgctacgt tgatcacgag
     1321 ggcagagacg ctctcgccag ccggttcgag gagcacccag gcgacgagca ggccgttgaa
     1381 cagcaggatc agcccggcgg cacgtcgaag ggcacgtgcc ccagcactat cctgtgaggg
     1441 tcgtcctgtc cgtgcggtgc ctgctttcat atcgcgcctc tgctaatgcc gtagttcggg
     1501 acccattatt agccttttcc tgctatcctg ccacctcgaa actcacatcc ctctcgcact
     1561 ctctcttggg gcggggtgct cctcgctcgt cctgttaggt aacgagggta gcttaacccc
     1621 cgtgagaggc atcctgcaag gaaactcgtc gctgtggaaa ccaatagtat gcgtctcatt
     1681 ttttcacctc ctttccccaa cgcttgttgc tcgtaagata caaagcatta tggtacgccc
     1741 ctttagggga gcacattgtc agaactacct atttttgagc agggggggta cctatttaat
     1801 tgcccttatt caccaacgac cttagaaggt gaattcccgg aaatctgtat ccaccaccgt
     1861 gcatagttct ggatcggagc ggtggctcaa ggtctcccac gaggtcggtg aatatagagg
     1921 tcgaaacaac atcttgcg
//
LOCUS       DASQSL010001973         1089 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_94302, whole genome shotgun sequence.
ACCESSION   DASQSL010001973 DASQSL010000000
VERSION     DASQSL010001973.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94302"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..286
                     /locus_tag="VE844_19890"
     CDS             <1..286
                     /locus_tag="VE844_19890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020162027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HZC03524.1"
                     /translation="ANLKAQVLIAPHHGSKTSSSSSFIEAVDPDYVLFPVGYRNRYGF
                     PKEEVQQRYLKQGVITLNVAEAGAIRWVIGDRIALPDRYRYSHRRYWHSR"
     gene            complement(338..1039)
                     /locus_tag="VE844_19895"
     CDS             complement(338..1039)
                     /locus_tag="VE844_19895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03525.1"
                     /translation="MRWDPKAATEAELRTMEQHLDELGLQVAHARTAYEREKKEADTI
                     KALLSQRMAAAEQLQKQLAAETEPGRKIGLEKSLAILVDMLEQMTPEVERESKDEIDA
                     QDFLAMLEKTYAEVDAKLKTARSQLDRAGRDMKRAEHQRGLAERQAEAARRAAGLSST
                     TSKLNVALKTMQDAAARDLAAAEAANAKARLLKPTSPEEGDPNIAAALAAVSGAKPPP
                     QNLSERLAAIKARQG"
BASE COUNT          170 a          342 c          318 g          259 t
ORIGIN      
        1 tgccaatctt aaggcgcagg tcctgatcgc tcctcaccac ggtagcaaaa cctcttcgag
       61 ctcgagcttc atagaagccg ttgacccgga ttatgtgcta tttccggtag gttaccggaa
      121 ccggtatgga tttcccaagg aagaggtgca acagcgctat ctcaagcagg gtgtgatcac
      181 gctcaatgtg gctgaggctg gcgcgatacg atgggtcatt ggtgatcgta tcgcgctgcc
      241 ggatcgctat cggtacagcc acaggcgtta ttggcatagc cgctaaccgc aagcgttaag
      301 ctttttagca tcccatcatc tatgcattat ggattgctca gccctgtcgt gccttgatcg
      361 cggcgaggcg ctccgacagg ttttgcgggg gcggtttagc accggagacg gcagcgagcg
      421 cggcggcgat attgggatca ccctcctcgg ggcttgtggg tttgagcaat ctcgctttgg
      481 cattcgccgc ctcagccgca gcgagatccc tggcggcagc gtcctgcatt gttttcagcg
      541 cgacgttgag cttgctggtg gtgctgctga gcccggcggc ccgccgagcc gcctctgctt
      601 gccgctccgc cagcccgcgc tggtgttcgg cgcgcttcat atcgcgcccg gcgcgatcga
      661 gttggctacg cgccgtcttg agcttggcgt ccacctcggc ataggtcttc tcgagcatcg
      721 ccaggaagtc ctgggcatcg atctcatctt tgctttcacg ctccacctca ggggtcatct
      781 gctcgagcat atcgaccagg atggcgaggc tcttttccaa gccgatcttg cggcctggct
      841 cggtctccgc cgccagttgc ttttgcaact gctcggccgc cgccatacgc tggctgagca
      901 gcgccttgat cgtatctgcc tcttttttct cgcgctcata agcggtgcgt gcgtgcgcca
      961 cctggagtcc cagttcgtcc aggtgctgct ccatggtgcg gagctctgct tccgtcgctg
     1021 ccttcggatc ccagcgcacc aaggcctcga taccgacctg gacaccctaa tcggtcttca
     1081 ccctaccag
//
LOCUS       DASQSL010001974         1300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_173712, whole genome shotgun sequence.
ACCESSION   DASQSL010001974 DASQSL010000000
VERSION     DASQSL010001974.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173712"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..241
                     /locus_tag="VE844_19900"
     CDS             <1..241
                     /locus_tag="VE844_19900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03526.1"
                     /translation="NPANVKALEPPKYVETPVRPLPLQPSILEDLKNMILASVRRSTS
                     SGKIIEIDRNSQASKTLTPEMKADIPAAASARVDE"
     gene            261..992
                     /locus_tag="VE844_19905"
     CDS             261..992
                     /locus_tag="VE844_19905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03527.1"
                     /translation="MATVMPEYDLQTLYPHRKAISSTQFLDYEQSPGDFYIRWVLGVR
                     GAPSIPMQIGRIFSALYADRTLDYRALLNEAGASARIGQLFEAAMKCFPVLQGGTPET
                     PLYAKSGPWELRATLDDFVRRHSTIVENKTGTTVWDQERVNGNDQLTFQAFVHWKKYG
                     IPPRNIIVNWVDCRPSATQLIHTFQTTRSIRHLQQFEVRVETVIANLEAENFTRPVGS
                     FDQYCREDKTLWRASSQPSKPEPTR"
BASE COUNT          325 a          407 c          326 g          242 t
ORIGIN      
        1 aaatccggca aacgtcaaag cgctagagcc acccaagtac gttgaaacgc cagtacggcc
       61 tttacccctt cagccaagca tcctcgaaga cctgaaaaat atgattctgg cctccgtacg
      121 tcgctccacc tcatcgggaa agatcatcga gatagaccgc aacagccaag cgtcgaagac
      181 gctcacgccg gagatgaaag cggacatccc tgccgccgcc tccgcccgcg tggacgaatg
      241 agcagtgagg agaacatgat atggcaaccg tcatgccgga gtacgatctc caaaccttat
      301 atccccaccg taaagccatc tcaagcacac aattccttga ttacgaacaa tcgcccggag
      361 atttctacat ccggtgggtt ctcggagtca ggggcgctcc ttccatcccc atgcagatcg
      421 gccgcatctt ctcggcgttg tacgccgacc gcaccctcga ttatcgggcc ctcctcaacg
      481 aggcgggcgc atcggcgcgg atcggccagc tgtttgaagc ggcgatgaag tgcttcccgg
      541 tgctccaggg cggcacgccc gaaaccccgc tgtacgccaa gtccggacca tgggaactac
      601 gcgccaccct cgatgatttt gtgcggcggc actccaccat cgtggagaac aaaacgggca
      661 caaccgtctg ggatcaggag cgggtgaatg gcaacgatca gctcaccttt caagccttcg
      721 tccactggaa aaagtacggc atccccccgc gtaacatcat cgtcaattgg gtagactgcc
      781 gccccagcgc gacacagctc atacacacct tccaaaccac ccgctcaatc cgacacctcc
      841 agcagttcga agtgcgcgtg gaaacagtga tcgcgaacct cgaggcagaa aactttacca
      901 ggcctgttgg ttcattcgat caatactgtc gagaagacaa aacgttatgg agagcatctt
      961 cacagccttc aaaacctgaa ccaacacgct gatctgctca cgggcacaga cattcagtct
     1021 ggggcttctc ttggtaatcc gtctccccac gagctgggca aacaccccgg aaagagcatg
     1081 gctcattccc tcgcacccga cgggagtcag ctgagcgtat tgcccctggt gacaggcttg
     1141 ttggatttgg gcatatacgc acagtgtccc gaaaaccccc gatatgtgga cactgcgaat
     1201 gagaccatct caagctgaag gctcaaggta ggcgagctgt ccaaaaagcc atcccgcaat
     1261 caaggtgtca aaacgtcggt tagtcagtga gttctgagac
//
LOCUS       DASQSL010001975         1565 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_119530, whole genome shotgun sequence.
ACCESSION   DASQSL010001975 DASQSL010000000
VERSION     DASQSL010001975.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1565)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1565)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1565
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119530"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="VE844_19910"
     CDS             complement(<1..268)
                     /locus_tag="VE844_19910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03528.1"
                     /translation="MILDIVHMLNDDQNEVEMSRQALDRLGALVGCEFMCYIRVEHTG
                     RWLGNVIETGDINFGRLPGFHTAFRQHPAFAAYHCGRLTLGTSAA"
     gene            357..1184
                     /locus_tag="VE844_19915"
     CDS             357..1184
                     /locus_tag="VE844_19915"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC03529.1"
                     /translation="MAPTGEFEGYANSLQSPEGPLPGQATTGLTSEQFDELVERVEQR
                     VTWNSGQGRPRELMLRQAVKAVVMYFRTNITQEVIAELLFVDQSTISRAISDLEEIIA
                     EALDEFIPELPEEIKGRVGVVDGSLCPCWSWADSPELYSGKHKTTGHAHQFVCDLSGN
                     LLHISDPLPGKTHDAKAMDDTGLRELLGDENALGDKGYLGTGITVPYRRPAGGKLLNW
                     QKEFNTTINKIRYVIERAIAYFKTWRCMHTDYRRPKRTYATAFEAVRALHFFKLSFA"
     gene            complement(1225..>1565)
                     /locus_tag="VE844_19920"
     CDS             complement(1225..>1565)
                     /locus_tag="VE844_19920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011212412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZC03530.1"
                     /translation="LVDRERVLGGDHPNTLTSRNALAGAYRAVGRLAEAILLYKQTLA
                     DRERVLGGGHLDTLASRNNLAGAYRVLGRLDKAIPLFKTTLAKCEQMLGGSHPTTRAV
                     RENLRLAQAQ"
BASE COUNT          350 a          483 c          445 g          287 t
ORIGIN      
        1 gggcagccga ggtgcccagc gtcagccgac cgcagtggta ggcggcgaat gcagggtgct
       61 ggcgaaacgc ggtgtggaag cccggtaggc ggccgaagtt gatgtcgccc gtctcaatga
      121 cgttgcccag ccaacggccg gtatgctcga cgcggatgta acacatgaac tcgcagccca
      181 ccagcgcacc cagccggtcc agcgcctgcc gggacatctc cacctcgttc tgatcatcgt
      241 tcagcatgtg cacgatgtcg aggatcatct tgaattcctt cgtgcgcaga ctaggaggtt
      301 tatgcagaag ccttttaaag gggtgaatgt ttcggcgtgt cgtaaccagt agggcaatgg
      361 ccccaacggg agaatttgaa ggctacgcca atagtcttca gagcccggag ggaccattgc
      421 caggccaggc tactacggga ctcacgtccg agcaattcga cgagctcgtc gagcgcgtcg
      481 aacagcgagt gacctggaat agcggacaag gcagacccag ggaactgatg cttcgtcagg
      541 cggtgaaagc ggtcgtcatg tacttccgca ccaacatcac ccaagaagtg atcgccgaac
      601 tgttgttcgt tgatcaatcc acgatctcca gagcgatcag cgacctggaa gagatcatcg
      661 ctgaggcact cgacgagttc atccccgagc tacccgagga gatcaaaggc cgagtcggcg
      721 tagtcgacgg gtcgttgtgt ccctgctggt cctgggctga ttcgcccgag ttgtactccg
      781 ggaaacacaa gaccaccggc catgctcacc aattcgtgtg tgatctgtcc gggaaccttc
      841 tacacatctc cgacccgcta cccggcaaga cccacgacgc gaaggcgatg gacgacaccg
      901 gcctgcgtga actcctcggc gacgagaatg cgttaggcga caaaggctac ctcggcaccg
      961 gcatcactgt cccgtatcgc agacccgccg gtggcaaact cctcaactgg cagaaggagt
     1021 tcaataccac gatcaacaag attcggtacg tcatcgaacg agcaattgct tacttcaaga
     1081 cctggcgctg catgcacacc gactaccgta gaccgaaacg cacctacgcc acggcattcg
     1141 aagctgtccg agccctccac ttcttcaaac tgagttttgc ataagcctca gtgaatcatt
     1201 ccattaacgc gaccagcact acaattattg cgcctgtgcc agtcggaggt tctcccgcac
     1261 tgcccgggtg gtgggatggc taccaccgag catctgctcg catttggcca gcgtagtctt
     1321 gaagagcggg atagccttat ccaaccgccc caacacccga tacgcgccgg cgaggttatt
     1381 gcgcgaggcc aaggtatcga ggtggcctcc accgagcacc cgctcacggt cggccaacgt
     1441 ctgtttatac agcagaatgg cctcggccag ccgccccacc gcccgatacg caccggcgag
     1501 ggcgttgcgc gaagttaaag tgttggggtg atcgccacca agcacccgct cgcggtcaac
     1561 cagcg
//
LOCUS       DASQSL010001976         1236 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_94327, whole genome shotgun sequence.
ACCESSION   DASQSL010001976 DASQSL010000000
VERSION     DASQSL010001976.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1236
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94327"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..227
                     /locus_tag="VE844_19925"
     CDS             <1..227
                     /locus_tag="VE844_19925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03531.1"
                     /translation="SAEKLFRDVPEFRPVVSLEEGMRQVIDAMDQAGRIPDSDLEDWE
                     DRILAAHGKAPVGSRERRYRGPTGDTLVGH"
     gene            complement(266..517)
                     /locus_tag="VE844_19930"
     CDS             complement(266..517)
                     /locus_tag="VE844_19930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03532.1"
                     /translation="MGLTQAQLDGVATHADELSPFSELERLVIRYAEQLTTTVHTDEV
                     LDRELQKHLSAREMVELAVTVATANATTRICNALKIEED"
     gene            complement(548..778)
                     /locus_tag="VE844_19935"
     CDS             complement(548..778)
                     /locus_tag="VE844_19935"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HZC03533.1"
                     /translation="MALVSLLARDQISIEDLQKAEKVIGRVLNFHKVVAHSPRALSGY
                     LVLSEALKEMKLDRKLRELAYLRTAQLNRCPY"
     gene            complement(1031..>1236)
                     /locus_tag="VE844_19940"
     CDS             complement(1031..>1236)
                     /locus_tag="VE844_19940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03534.1"
                     /translation="RNNNVQAKVALLGDAVLLMNQDIAEQTKLPGRAPGGGPVKLGTY
                     PIDLISLRELVMTALNAGVEILC"
BASE COUNT          237 a          350 c          388 g          261 t
ORIGIN      
        1 acagcgcgga gaaactgttc cgggacgtgc cggagttccg tccagtggtg tcgttagagg
       61 agggcatgcg gcaggtgatc gacgcgatgg accaagcggg tcgcattccc gactcggacc
      121 tggaggattg ggaggaccgt attctcgccg cacacgggaa ggcgccagtg gggagtcggg
      181 agaggcgcta tcggggccct acaggggaca cactggtggg ccactgaacg gttgcagccc
      241 accaagaagc gtcccccatc gacccctaat cctcctcgat cttcaacgcg ttgcagatgc
      301 gcgtggtggc gttagcggtg gcaacggtca cggcgagttc gaccatctcc cgggccgaga
      361 gatgtttttg taactcgcga tcgagaacct cgtccgtgtg caccgtggtg gtgagttgct
      421 cggcgtagcg gatgactaat cgctcaagct cgctgaaggg gctgagctcg tcggcgtgag
      481 tggcgacgcc gtcgagctgg gcttgtgtga gccccaccct ctgaccgagg gcggtgtgca
      541 gagtgactca atacggacag cggttgagct gggctgttct caggtaggcc agctcccgca
      601 gcttgcgatc gagcttcatc tctttgagcg cttcgctcag tacgagatat cccgacagcg
      661 ctcttgggga atgtgccacc actttgtgga agttcaggac gcgtccgatc accttctcag
      721 ccttctgcag gtcctctatg gagatctggt cacgcgcaag aagcgatacc agcgccatgt
      781 tctttcccct ctctccggcg taaaggttca aagccgatct cgggaatgac ttgagacacc
      841 gctcgcgaat cgccgctgtg tatacacggg ctgtcactga cggatacttc tacagcgaga
      901 cgatattgat cgcgtctacg gacagttggg cgaatcgatt ggagttcatg agcatcggtg
      961 gattcgttgc cgaccatgaa cgcaaatcag tctgggtgat gacgccgcca cgggcgtcga
     1021 tgcagctctg tcaacacaag atctcaacgc ccgcattgag tgcggtcata accagctctc
     1081 tgagcgagat caggtcaatc gggtaggtcc cgagcttaac cggaccgcct cccggtgctc
     1141 tccccggcag tttggtctgt tcggcgatgt cctggttcat gagcaaaacg gcatcgccga
     1201 ggagggccac tttcgcctga acgttattat tccgcg
//
LOCUS       DASQSL010001977         1116 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_94331, whole genome shotgun sequence.
ACCESSION   DASQSL010001977 DASQSL010000000
VERSION     DASQSL010001977.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94331"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..207)
                     /locus_tag="VE844_19945"
     CDS             complement(<1..207)
                     /locus_tag="VE844_19945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007913526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03535.1"
                     /translation="MPPLPEAILLVLAPFALLFSQRVWGHAQVLLLGAILAPRGRTVT
                     AALRVMGFALERHFTNYHRVLNRAT"
     gene            530..>1116
                     /locus_tag="VE844_19950"
     CDS             530..>1116
                     /locus_tag="VE844_19950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010492921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HZC03536.1"
                     /translation="MDILSSRCCGLDVHAKTVVACLCIEGEKQIRTFSTMTADLLQLA
                     DWLLAAGCTHIAIESTGVYWRPVFNLLEDHFPVLLVNAHHIKAVPGRKTDVRDCEWIC
                     DLLRHGLLKASFIPPRHIRELRELTRHRQILVRERAAVATRIQQLLGSANIKLGQVAT
                     NVLGLSGRLLLQALADGEADAATLAQLAKGKLKAKA"
BASE COUNT          239 a          329 c          330 g          218 t
ORIGIN      
        1 cgtggcccgg ttcaggacgc gatggtaatt ggtgaagtgg cgttccagag cgaagcccat
       61 tacccgcaag gcggcggtca ccgtgcgccc cctgggagcc agtatcgcgc ccaacagcaa
      121 gacttgcgcg tggccccaga cccgctggga gaagagtagt gcaaaggggg ccaaaaccag
      181 taagatggct tctggcaggg gcggcatgcg atgtcctcct tcgatagcat gacctttggc
      241 agagatcatc tatcgtaagg gacagctcac ccccctgctt actcaaaatg gccaaagcct
      301 ttatgaatcg tggctacact gccacggatg aaaatggggc ttcgtaagga gaagatggca
      361 ccgtcctcag tgaccgaagg tcgctctcga cttggtgcca gcaacccgag cgaaagcctg
      421 accgtgagaa ccagttgggc accaccaact gttgccacgc tatgtgagca cgcataagag
      481 actctttccg tttggttctc attctgagga cgtgaacggg agaactcata tggacatcct
      541 gtcttcgcgc tgctgcggtc ttgatgtgca tgccaaaacg gtggtggctt gcctctgcat
      601 cgaaggcgag aaacagattc ggaccttctc gactatgaca gcggatctct tgcaactggc
      661 ggactggctc ctggctgccg gttgcacgca cattgccatt gagagcactg gggtctactg
      721 gcggccggtc ttcaatctgc tggaagacca ctttcccgtc ctactcgtca acgcccacca
      781 catcaaagcg gtgcccggac ggaagactga cgtccgggac tgcgagtgga tttgtgattt
      841 gctgcgccat ggtctgctca aggccagctt cattccaccc cggcacatcc gtgaattgcg
      901 agaattgacg cgtcaccggc agatcctggt gcgcgagcgc gcggcagtcg caacccgtat
      961 ccagcaactc ctgggatcgg cgaatatcaa gctgggccaa gtcgccacca acgtgctggg
     1021 cctgtccggc cgattactgc ttcaggccct cgccgacggt gaagcggatg ccgcgacact
     1081 cgcgcagctg gccaagggga aactcaaggc caaggc
//
LOCUS       DASQSL010001978         1037 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_81848, whole genome shotgun sequence.
ACCESSION   DASQSL010001978 DASQSL010000000
VERSION     DASQSL010001978.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81848"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            196..897
                     /locus_tag="VE844_19955"
     CDS             196..897
                     /locus_tag="VE844_19955"
                     /inference="COORDINATES: protein motif:HMM:NF033547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HZC03537.1"
                     /translation="MPKPATPTSMPYGGKIALSNVPTATAPRSVPGAPITTGQGSGAT
                     GAPAVGAPSSLGRRPRRRRKKREPGRGHYDKDRPAMIAWVSRQGPVVVQAVKDFTVKT
                     VQQATDLTVQAGSRLYTDSASSYRALKGYVHAFVNHTKKEYVRGEVHENRTECLFSLL
                     KPYLRVFRGISKSNLPGYVGFFQFLRNVRQRNAFEQAELILQAALAPCVAHQARKGEF
                     VTCFDHFDLLQTPIN"
BASE COUNT          223 a          324 c          286 g          204 t
ORIGIN      
        1 agaagaatat gtgctgaaaa aaattggctc tcccggaatt cccgtgaaaa cagaatcgct
       61 caatttatcg gagtttgtag cagcgtaaaa acttgcgcaa gagatgagaa tctctccagc
      121 cgttcgagaa ttgcgcccgc gaccagagga gattctcatc catgtcgacc ctctcgcatg
      181 tccaccaatt tttccatgcc gaaacctgcc acgcctacct ccatgcctta cggtggcaag
      241 atcgccctat ccaatgtccc cactgccaca gccccgaggt ccgtacctgg ggcacctatc
      301 actaccggcc agggttcagg cgctaccggt gcacccgctg tcggcgcacc ttcgtcgttg
      361 ggacgccgac cacgtcgtcg ccgcaagaaa cgcgagcctg gccggggcca ttacgataaa
      421 gatcggccgg cgatgatcgc ctgggtcagc cgtcagggtc ccgtcgtcgt acaggcggtc
      481 aaggatttca ccgtcaagac ggtgcagcag gcgaccgacc tgacagttca agcgggcagt
      541 cggctctata ccgactcagc cagcagctat cgggcgctga agggatatgt ccatgcgttc
      601 gtcaatcata cgaagaagga atatgtgcgc ggtgaggtgc atgagaatcg gacggagtgc
      661 ctcttctcct tgctgaagcc ctacctgcgg gtgtttcgtg gcatcagcaa gtccaatttg
      721 ccgggatacg tgggcttctt tcaattcttg cggaacgttc gtcaacggaa tgcgttcgag
      781 caggccgagc tgatcttgca ggcggcgtta gccccatgcg ttgcccacca agcccgcaag
      841 ggagagtttg tcacatgctt tgaccacttc gacctgctac aaactccgat aaattgagcg
      901 aagccagaat ggggcgtccc ccacggacgg gcaggaacgc gcggtcaccc ctgctgccgc
      961 tcatacggcg cctcaagccg ctccaccccc cagcccggtg cccatcatgg ctgggcaaat
     1021 gccccccgtg ggccaac
//
LOCUS       DASQSL010001979         1342 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_163975, whole genome shotgun sequence.
ACCESSION   DASQSL010001979 DASQSL010000000
VERSION     DASQSL010001979.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1342
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163975"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..368)
                     /locus_tag="VE844_19960"
     CDS             complement(<1..368)
                     /locus_tag="VE844_19960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002692163.1"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HZC03538.1"
                     /translation="MPDIHSHRLLVLDFGSQYTQLIARRVREAGVYCEIEPYDLSPEA
                     IRAFKPRGIILSGGPESVTVAKGIMAPPIIFDLGVPVLGICYGMQTMAFQLGGEVEIS
                     NVREFGYAQVRVCGHSRLLR"
     gene            complement(393..>1342)
                     /locus_tag="VE844_19965"
     CDS             complement(393..>1342)
                     /locus_tag="VE844_19965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010959655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HZC03539.1"
                     /translation="LHKHRIEKVLVVNDRFQLRGLITVKDIQKAQEFPNACKDEHGRL
                     RVGAAIGTGPGTQERVAALVEAGADIIVVDTAHGHSRDVLDRVRWIKRHYPDSQVIGG
                     NIVTGEAARSLVEAGTDAVKIGIGPGSICTTRIVTGVGVPQITAIANVQKALEGTGIP
                     LISDGGIRYSGDIAKAIAAGAHTVMIGSLFAGTEEAPGEVELYQGRSYKSYRGMGSLG
                     AMAQPQGSSDRYFQESDEIEKLVPEGIEGRVPYKGSLTAVIHQLLGGIRAAMGYTGCA
                     TLEEFRTEAQFVRVTYAGMRESHVHDVTITKEAPNYRIE"
BASE COUNT          273 a          433 c          366 g          270 t
ORIGIN      
        1 tctcttaaaa gccgggagtg accgcacacc cgcacctggg cataaccgaa ctcgcgtacg
       61 tttgagatct cgacctcccc gccaagctgg aaagccatgg tctgcatccc ataacagatc
      121 ccaagcaccg gtacgccgag atcgaagatg ataggtggcg ccattatccc cttggccacc
      181 gtcaccgatt ccggaccgcc ggagagaata atgccgcgcg gcttgaacgc acgaatagcc
      241 tcaggggata gatcgtaagg ctcaatctca cagtaaacac ccgcttcgcg gacccgccgt
      301 gcaatgagct gggtatactg ggaaccgaag tcgaggacga gcaggcggtg actatggatg
      361 tccggcatga cagcgtcagt cagatagggt gcctattcga tccggtaatt gggcgcctct
      421 ttggtgatgg tgacatcgtg gacgtgggat tcgcgcatgc cggcataggt gacgcgcacg
      481 aattgagcct cagtgcggaa ttcctcgagc gtggcacagc ctgtgtatcc catcgccgcg
      541 cggatacccc cgagcaattg atggataacc gcggtgaggc tccctttata aggcacccgc
      601 ccctcgatcc cttcaggcac gagcttctcg atctcatcgc tttcttgaaa atagcgatcc
      661 gaggaaccct gcggctgggc catggcccca agcgatccca tgccccggta ggatttatag
      721 gagcgcccct ggtaaagttc gacctccccc ggcgcctcct cggtcccggc gaacaggctg
      781 ccgatcatga ccgtgtgtgc gcccgccgca atggctttgg cgatatcgcc cgaatagcgg
      841 atcccgccat cggagatcaa cgggataccg gttccttcca aggccttctg gacatttgca
      901 atcgctgtga tctgtggcac cccgacaccc gtcacaatgc gcgtggtaca gatcgagccc
      961 ggaccgatcc cgatcttgac ggcatcggta cccgcctcca ccaggctcct cgccgcctcc
     1021 ccggtgacga tattgccgcc gatgacctgg ctatccgggt aatgccgttt gatccagcgg
     1081 accctatcga gcacgtcccg ggaatgtcca tgggcagtat ctaccacgat aatatcagcc
     1141 cccgcttcaa ccagggcggc tactcgctct tgtgtcccag gccctgtacc tatggccgcg
     1201 ccgacgcgca aacgcccatg ctcgtccttg caagcgttcg ggaattcctg ggccttttgg
     1261 atatccttga ccgtgatgag accccgcaat tgaaacctgt cattgaccac cagcaccttc
     1321 tcgatccggt gcttgtgcaa ta
//
LOCUS       DASQSL010001980         1112 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_81859, whole genome shotgun sequence.
ACCESSION   DASQSL010001980 DASQSL010000000
VERSION     DASQSL010001980.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81859"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(150..856)
                     /locus_tag="VE844_19970"
     CDS             complement(join(150..538,538..856))
                     /locus_tag="VE844_19970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017713065.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HZC03540.1"
                     /translation="MDACPKCTHPHVVKAGKVRGQQRWLCRGCGYQFTRSTPRGRPPW
                     QQSLAVFLYCHGVSMNALAKMFGVWTSTILTWIRRYAADHAEKPAPSGKAIVLEIDEM
                     WHFLKKKRRTRWIWKALDRDTGRLLDWECGRRDAATLKQLVDRLAPWDVTFYCTDHWP
                     VYAAVIPPERLVMSKARTDELERNHGRQRHWFGRFKRKSIMVSKAKDMVDLTMALFAR
                     FRVNGNVAEIFTLDMIT"
     gene            941..1112
                     /locus_tag="VE844_19975"
                     /pseudo
     CDS             941..1112
                     /locus_tag="VE844_19975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007922009.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
BASE COUNT          232 a          332 c          318 g          230 t
ORIGIN      
        1 cggcctttgt tgaggagggg aagcgcggat tgcatcaggg cccgaaggcc ttcagaagcc
       61 ttcagaggcc ggatatatgc ctgcatctgc cctctttcgt gtcgcagctc ggccgtccct
      121 tgacaccggc ggcgggtcga gagtattgtc taagtaatca tatcgagtgt gaagatctcc
      181 gcgacgtttc cattgacccg gaaccgggca aacagtgcca tggtgaggtc caccatgtcc
      241 ttggccttgg agaccatgat cgacttccgc ttgaagcgcc caaaccaatg ccgctggcgg
      301 ccatgattgc gctcgagctc atccgtccga gctttgctca tgaccagtcg ctcgggtggg
      361 atcacggcgg catataccgg ccaatgatcg gtgcagtaga atgtcacgtc ccatggggcc
      421 aggcgatcga ccagctgctt cagggttgcc gcatcacgac gcccgcactc ccagtcaagg
      481 aggcggcctg tatcacgatc cagagccttc cagatccagc gtgtgcgccg ttttttttga
      541 ggaaatgcca catctcatcg atttcgagga cgatcgcctt cccgctggga gcaggctttt
      601 cagcgtggtc agcggcatag cggcgaatcc aggtcaggat cgtgctggtc cacaccccga
      661 acatcttcgc taaggcgttc atcgagacgc cgtgacagta gagaaaaacg gccagcgact
      721 gttgccacgg cggtctcccg cgtggcgtgg agcgtgtaaa ctgatagcca cagccccgac
      781 ataaccaccg ctgttggccc cggaccttgc cggccttgac cacgtgcgga tgcgtacatt
      841 ttggacaggc gtccatgctt cccccccgat cgctctggtg acgaccaata cgatcgggaa
      901 gcatatcaga agatcgttac ttagacaata ccctccgacc atcaacggtg cacgtcatta
      961 cctgtagcgg gcggtggatc aggacgacaa cgtcctcgat atcctggtgc aacgtcgacg
     1021 gaacaagcgg gcggccaaga agttcttccg caagttactc aagggcttga ggtatgtgcc
     1081 ccgcgtcatt atcacggatc agctcaaaag ct
//
LOCUS       DASQSL010001981         1127 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_201534, whole genome shotgun sequence.
ACCESSION   DASQSL010001981 DASQSL010000000
VERSION     DASQSL010001981.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1127
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201534"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            248..>1127
                     /locus_tag="VE844_19980"
     CDS             248..>1127
                     /locus_tag="VE844_19980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017266161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HZC03541.1"
                     /translation="MNTLLVAASGLIAGLLLAPKTGKENREMLKERFSSLRETLMRKE
                     STKTCASVVASGGCGVPTSVGELVPALDPEEACQQALEAGLVVHRAHPLNCETSIPEL
                     IGGVVMPNARFYVRNHFQIPKLDPATFRLTVGGLVERPLSLSVRDLYNMRSQTLVVTL
                     ECAGNGRALFDPPAEGEQWALGAVSTAEWTGVPLVEVLDRAGVRTGAREVLFRGADRG
                     TVEDHSEPIRFERSFQLDHARKSDVLLAYAMNGEPLPIQHGYPLRLIVPRWYAVASVK
                     WLTEIELIDRPFTGYYQ"
BASE COUNT          241 a          321 c          334 g          231 t
ORIGIN      
        1 tgagtatatc cccgactctg cagcaggaca aggaaacatt gtgctctaca aggtaaaccg
       61 aggcttcgta aaacatggtc tcaaaaagga tcctttctga gacaactctc cttttctttg
      121 ctagcccgta acctacctgt gcgggggatg cgcccagcat taataccatg tactcgtgaa
      181 gatatcgaac tatcgctagg gttggcgtag cagctcaaga ttagaatttc agagaggaga
      241 aggaagaatg aatactttac ttgtagcagc gtcgggtttg attgctggct tgctattagc
      301 ccccaagacc gggaaagaga accgtgagat gctcaaagag cggtttagct cgctcagaga
      361 aacgctgatg agaaaggaaa gcaccaagac ctgcgcgagc gttgtcgcca gcggcggctg
      421 cggcgtgccg acgtcggtgg gtgagctcgt gccggcactg gatcccgaag aggcctgcca
      481 gcaggctctt gaagctggct tggtagtcca tcgggcgcat ccgctcaact gcgagacctc
      541 gatcccggag ctgattggcg gtgtagtcat gccaaatgcc cgcttctacg tccgcaatca
      601 cttccagatc cccaaactag acccagccac cttccggctc acggttggcg gcctcgtgga
      661 acgacctcta agcctcagcg tgcgcgatct ctataacatg cgatctcaga cgttggttgt
      721 caccctggag tgcgccggca acggccgcgc gctgttcgac ccccctgccg agggcgagca
      781 gtgggccctg ggtgccgtca gcacagcaga gtggacaggg gtgccactgg tggaggtcct
      841 ggaccgggca ggcgtgcgga cgggtgcgcg ggaggtacta ttccggggcg ctgaccgcgg
      901 aaccgtggaa gaccactcgg aacccatccg tttcgagcgc agtttccaac tcgatcacgc
      961 tcgcaagtct gatgtgcttc tggcctatgc catgaacggc gagccgttgc ctattcagca
     1021 cggctatcca ttgcgcctta tcgttccgcg ctggtacgcc gtagcgtcag tcaagtggct
     1081 gaccgagatc gaactcatcg accggccgtt caccggatat taccagg
//
LOCUS       DASQSL010001982         1724 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_81867, whole genome shotgun sequence.
ACCESSION   DASQSL010001982 DASQSL010000000
VERSION     DASQSL010001982.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1724
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81867"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(84..317)
                     /locus_tag="VE844_19985"
     CDS             complement(84..317)
                     /locus_tag="VE844_19985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03542.1"
                     /translation="METPEEVRRRVRREKQLASRLQLAVTRLETAQQERIWAIAAAYA
                     AGLSIRKIAAATRLSPSRIHQLLSTEEAREIPR"
     gene            412..>1724
                     /locus_tag="VE844_19990"
     CDS             412..>1724
                     /locus_tag="VE844_19990"
                     /inference="COORDINATES: protein motif:HMM:NF044287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toll/interleukin-1 receptor domain-containing
                     protein"
                     /protein_id="HZC03543.1"
                     /translation="MPNAGHLFLSYSSRDRDKVRAVHRYLSERSVTTFFDQQNLRAGQ
                     NWPHALEQALRDSSAVAVFVGAQIGNWQWSEIGFALDRQANDKQFPVIPVLLDGAETS
                     RSFLFLNTWVDLRGERLDDTEALNRLLDAVSRPGASLNEPLIDLNPYRGLEIFDEAHS
                     PFFFGREKFIDDLFDRLTQQRKKFVAVIGASGSGKSSVVRAGLVPKLRRRRPPHETWD
                     VAVFTPGERPWFRLADALGPLRFPDKSDTELDIEIDKLASALHSGELSLDSLLDRILQ
                     RQGKLHRLLLVVDQFEELFTLTPAQDRGVFINRLVDSLAVEGLVLAPTLRADFYGQAI
                     EANRRLSDMLGQEQVTLGRLTAEELSRAVVEPARLARLEFDPGLPELLLRDAGNEPGS
                     LPLLQHALLELYLQRQGNRLTSTAYQAIGGIRKAIANSAEREFNR"
BASE COUNT          306 a          521 c          515 g          382 t
ORIGIN      
        1 ccgaacgcct cacattccag taagggcaat gcagatcgag ttctccgaca ggctgctagc
       61 ccttgttctc gcagtggact gagtcatcgg ggaatttcac gggcttcctc agtactgagc
      121 agttggtgaa tgcggctcgg acttagcctc gtcgctgccg cgattttacg aatggacagg
      181 cctgccgcgt atgccgctgc tatcgcccaa atgcgttcct gctgggcagt ctcaagccgt
      241 gtgacagcaa gctggagccg actggccagt tgtttctctc gacggacgcg ccgtctcact
      301 tcctcggggg tttccatgca ccataggcta cttgatttga ctctaggctg tccagtaaac
      361 tggacgcctt gcgccatttt tcgcgcgctt actcgtcaac cccctgcttg catgcctaac
      421 gctggccacc tgttcttgag ctacagcagc cgcgatcgcg acaaggtgcg ggccgtacat
      481 cgctatttga gcgagcgcag cgttaccacg tttttcgatc agcagaacct gcgcgcgggg
      541 cagaactggc ctcacgccct ggaacaagcg ctaagagatt ccagcgcggt tgccgtgttt
      601 gtcggcgcgc agataggcaa ctggcaatgg tccgagatcg gcttcgcgct tgaccgtcag
      661 gccaatgaca agcagtttcc tgttattccc gtgttgcttg acggtgccga gaccagtcgt
      721 tcgttcctgt tcttgaacac ctgggtggac ctgcgcggcg agcgcctaga cgatacggaa
      781 gcgctcaatc gcctgctcga tgcggtatcg aggccgggtg cgagcctcaa cgagccgctc
      841 atcgatctca atccttatcg cggcctggag atcttcgatg aggcccactc accgtttttc
      901 ttcggccgcg agaagttcat tgacgatctg ttcgatcgcc tcacgcaaca acgcaagaaa
      961 ttcgtcgcgg tgatcggtgc ctccggtagc ggcaagtcct ccgttgtgcg cgcgggtttg
     1021 gtacccaagc tgcggcgccg gcggccgccg catgaaacgt gggacgtggc agtgttcacc
     1081 cctggtgagc ggccctggtt ccgcttggcc gatgcgctcg gtccgctgcg tttcccagac
     1141 aagagcgaca ccgaactcga tatcgaaatc gacaagctcg ccagcgcgct tcattcgggc
     1201 gagctgagtc tcgattcctt gctcgatcgc atcttacagc gccagggcaa gctgcatcgt
     1261 ttgctgctgg tcgtggatca gttcgaggag ctgtttaccc tcaccccggc tcaggaccgg
     1321 ggagtattca tcaatcggtt agtggacagt ctcgccgttg aagggctggt gctcgcacct
     1381 acgctgcgtg ccgacttcta tggccaggcg atcgaagcca atcggcgtct cagtgacatg
     1441 ctcggccagg agcaagtcac ccttggacgc ttgaccgccg aggaattgag ccgtgccgtg
     1501 gtcgagccgg cgcgtctggc gcgcctggag ttcgatccgg gactaccgga gttgttgtta
     1561 cgtgatgcgg ggaacgagcc tgggagcttg ccgctgctgc agcacgcgtt gctcgagtta
     1621 tacctgcagc gccaaggcaa tcggctgacc agcaccgcgt accaagccat tggcggcatt
     1681 cgcaaggcga ttgccaattc cgccgagcgt gagttcaacc gttt
//
LOCUS       DASQSL010001983         1117 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_201541, whole genome shotgun sequence.
ACCESSION   DASQSL010001983 DASQSL010000000
VERSION     DASQSL010001983.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1117
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201541"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(224..>1117)
                     /locus_tag="VE844_19995"
     CDS             complement(224..>1117)
                     /locus_tag="VE844_19995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-glutamate dehydrogenase"
                     /protein_id="HZC03544.1"
                     /translation="MRDEVADRVIQDNYRQIWAISVAERESELHFDWYWRFIVSLERK
                     EILDRTLEALPDDEVLSERRAARKGLTRPELACLLAYAKLSLYPQILASNLPDDPYLS
                     TVLERYFPAPLRQRFANEIQEHRLRREIIATIATNSLVNRAGITFAQRMQDQSGLDIP
                     AIARAYMSARDVFALRDLWSAIDAVEDRVAQRVGVAMILETQRMLERATRWFLRRRHH
                     YSEIAATVECFAPAVAAMAASLPQWVVGLERSVIEESVQHYQEQGVSTALAAHIASLD
                     ALVCTLGLSEIAPTVELELMP"
BASE COUNT          231 a          339 c          309 g          238 t
ORIGIN      
        1 actgtatcgc ggtgcttgtc tagccagata tcaataccgg tctcgacggt gccggtgtaa
       61 gccttgagta ctgtagctgt gagtcccttc tggaattcga gcacctgctc agcgagatcc
      121 atccgcgccc gttcttgcca ctggttctca gccgggagtt tggcgatctg tcgcctcaac
      181 caatacagat ctaacctttc cccgagctga aaatacgccg tggctagggc ataagttcga
      241 gttcgacagt tggagctatc tcactcagac ccaaggtaca taccaaggcg tcgagactcg
      301 caatgtgagc ggcaagcgca gtggacacgc cttgttcctg gtaatgctgg acgctttcct
      361 ctattaccga tcgctctaat cctactaccc attgaggcaa gctggcagcc attgccgcga
      421 cagccggtgc aaagcattcg accgtggcgg cgatctcgct atagtgatgc cgcctgcgta
      481 ggaaccaccg ggtggcccgc tccagcatcc gttgggtctc taggatcatg gccaccccca
      541 ccctttgtgc gacacgatcc tccacggcat cgatggcact ccagagatcg cgcagggcga
      601 atacatcccg ggcgctcata taggcccggg caatcgcggg tatatccagc ccactctggt
      661 cttgcatgcg ctgggcaaag gtgatgcctg cgcgattgac gagactgttg gtggcgatcg
      721 tagcgatgat ctcgcgacgc agccgatgtt cctggatctc gttggcgaag cgctgccgca
      781 aaggcgctgg gaaatagcgt tccagcacgg tggacagata aggatcatcg ggcaggttcg
      841 aggccaggat ctgcggatat aagctcagct tcgcataggc gagcaggcac gcaagctcag
      901 gacgggtcag ccccttgcgg gcggctcttc gctcagagag cacctcatcg tcaggcaagg
      961 cttccaaggt gcgatccaat atctccttgc gctctagact cacgataaat cgccagtacc
     1021 agtcgaaatg cagctctgac tcccgctcgg ccacactgat cgcccagatc tggcgataat
     1081 tgtcctggat cacccgatcc gccacttcat cccgcat
//
LOCUS       DASQSL010001984         1076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_173814, whole genome shotgun sequence.
ACCESSION   DASQSL010001984 DASQSL010000000
VERSION     DASQSL010001984.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173814"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(100..1059)
                     /locus_tag="VE844_20000"
     CDS             complement(100..1059)
                     /locus_tag="VE844_20000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015099383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HZC03545.1"
                     /translation="MPHLDLSKLTVGLSRTWAGFLRDWDRSLRSGNYPETTRYNYLLA
                     AAQLAGYLGEYSPDPEAGDAAEDPCEVTRAQVEAFQAWMIQTRSASTALNKHKGLQQF
                     FKWLRDDEQEIDRSPMERVRQPKTPQKLIPIIRDDETAKVLGTCTGKGFPQVRDEAII
                     RLLYNTGARLSEVGALQLGDVDLTTDSLCYHGKGSKDRRVRFGPKAGRALSRYLRARA
                     KHKGAGLADLWLAERGVQRFTPNGIKIMLKRRGVAAGLSGVHAHRWRHNFAHEWKRAG
                     GDTGDLMLLLGWTSEDMPRHYGASAAAERAQETQLRIGIGEQV"
BASE COUNT          202 a          350 c          306 g          218 t
ORIGIN      
        1 tgatccagga agacagcaga gcttcgcgct catccgatgt catacccaaa aatatcactc
       61 ctgacggtcg ctggcgattg taaagaactg gcgtggatct tagacctgtt cgccgattcc
      121 tatccttagt tgggtttctt gtgctcgttc ggctgctgcg ctagctccgt agtggcgcgg
      181 catgtcttca gaagtccacc ctagcagcaa catcaaatct ccggtgtctc ccccggcccg
      241 tttccactca tgcgcgaagt tatgccgcca ccgatgcgca tgcacacccg acaagcccgc
      301 agccaccccg cgacgcttca acatgatctt gatcccattg ggagtgaacc tctgcacacc
      361 gcgttcagct agccacagat ccgccaatcc ggcgcccttg tgcttggcgc gggcacgcaa
      421 gtaccgactc aacgctctgc cggccttggg gccgaaccgc acacggcgat ctttgctgcc
      481 cttgccgtga tagcaaaggg aatcagtagt gaggtcgacg tcaccaagtt gcaaggcacc
      541 cacctcggac agacgcgcac cggtgttgta cagtagccgg atgatcgctt cgtcgcggac
      601 ctgagggaag cccttgcccg tacaggtgcc gagcacttta gccgtctcgt catctcggat
      661 gatcgggatc agtttctgcg gtgtcttggg ttggcggact cgctccatcg gcgagcggtc
      721 gatctcctgc tcatcgtcgc gaagccattt aaagaactgc tgtagcccct tgtgtttgtt
      781 caacgcggtc gacgccgagc gggtctggat catccaggcc tggaacgcct cgacctgggc
      841 acgggtgacc tcgcacgggt cctcggcagc atccccggcc tccgggtccg gtgagtactc
      901 ccccaggtag ccggcgagct gagcggcggc cagcaaatag ttgtaccggg tggtctccgg
      961 gtagttcccg gaccgcagcg accggtccca atcccgcagg aacccggccc aggtccgaga
     1021 caaccccacg gtgagcttcg aaagatccag atgtggcatg acaacctgcc cgagtc
//
LOCUS       DASQSL010001985         1039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_119588, whole genome shotgun sequence.
ACCESSION   DASQSL010001985 DASQSL010000000
VERSION     DASQSL010001985.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119588"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            142..948
                     /locus_tag="VE844_20005"
     CDS             142..948
                     /locus_tag="VE844_20005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012257125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZC03546.1"
                     /translation="MNRKPYPSDVSDDEWAFVAPYLTLMTEDAPQREYSLREVFNGLR
                     WIVRAGAAWRMLPHDLPPWYTIYQQSQRWFKAGVFETLGIDLRALLRLAQGRNPQPSA
                     AIFDSRTIQSTPESGWRAGFDPAKRRRGSKVHLAVDTLGHRLALLVTPANEQDRHQVA
                     ELPKEVQEATGDLVELAFVDQAYTGEQAAQDAAANHMKLDVVKRPEAKRGFVLLPRRW
                     VVERRQGWMARFRRLARDYEQLAETLKGLHVVACAMLMLRQLTELILQSA"
BASE COUNT          217 a          262 c          323 g          237 t
ORIGIN      
        1 agaacgtgac ttggtagaaa atggcttttt ttgagaacgt agcttggtag aaaatggctt
       61 tttttgagaa cgtgacttcg gagaaagtgg cttccttaga gcgtgttatg cactttgcat
      121 cgctgatggt acactggaag gatgaacaga aaaccatatc ccagcgatgt cagcgatgac
      181 gaatgggcct ttgtagctcc ctatttgacc ctcatgaccg aagacgcccc gcaacgcgag
      241 tacagcctgc gcgaggtctt taatggcttg cggtggatcg tacgagcagg cgcggcatgg
      301 cgcatgctgc cccacgattt gccgccctgg tacaccatct atcaacaaag ccagaggtgg
      361 ttcaaggccg gcgtgtttga aaccctgggg atcgacttgc gcgcgttgct tcgcctggcg
      421 caaggtcgca acccccaacc ctcggcggcg attttcgata gtcgaaccat tcaatcgacg
      481 cccgaaagcg gctggcgagc gggttttgat ccggccaaac gccgccgcgg ctccaaagtg
      541 cacctggcgg tggataccct ggggcatcgg ttggccttgt tggtgacacc ggccaatgag
      601 caggaccgtc atcaggtggc ggaattgccc aaagaggtgc aagaagccac tggtgatttg
      661 gtagaactgg cgtttgtgga ccaagcctac acgggtgagc aagcggctca agatgccgcg
      721 gccaaccaca tgaaactcga cgtggtgaag cgccctgagg ccaagcgtgg ctttgtgttg
      781 ctgccacggc gctgggtggt ggagcggcgt cagggctgga tggctcggtt tcgtcgcctt
      841 gcgcgggact acgagcaatt ggcggagacg ctcaaagggt tgcatgttgt ggcttgcgcc
      901 atgctcatgt tgaggcaatt gactgaactt atacttcaaa gtgcataaca cgctcttaga
      961 cggtgtatac gttggctctg gaccgaacca cttggatgtt ggggtgcttg ccgatcaatt
     1021 ttctcgtctt gtcggtggt
//
LOCUS       DASQSL010001986         3712 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_173819, whole genome shotgun sequence.
ACCESSION   DASQSL010001986 DASQSL010000000
VERSION     DASQSL010001986.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3712
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173819"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            251..1399
                     /locus_tag="VE844_20010"
                     /pseudo
     CDS             251..1399
                     /locus_tag="VE844_20010"
                     /inference="COORDINATES: protein motif:HMM:NF015279.4"
                     /note="Presence of a B(12) (cobalamin)-binding domain
                     implies dependence on cobalamin itself, in one of its
                     several forms, or in some unusual lineages, dependence on
                     a cobalamin-like analog.; internal stop; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-dependent protein"
     gene            1453..1779
                     /locus_tag="VE844_20015"
     CDS             1453..1779
                     /locus_tag="VE844_20015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03547.1"
                     /translation="MSILAPINQAIETHNRHVAAQIQRARTDPAFQQELLTHWKAIQS
                     RIETVTTPTGLKLPRLALPQTDEPGEIARYLYGEGLPGEFPFVNGIYPEMYLDPLLSS
                     TLVRER"
     gene            1813..3228
                     /locus_tag="VE844_20020"
                     /pseudo
     CDS             1813..3228
                     /locus_tag="VE844_20020"
                     /inference="COORDINATES: protein motif:HMM:TIGR00641.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
     gene            complement(3294..>3712)
                     /locus_tag="VE844_20025"
     CDS             complement(3294..>3712)
                     /locus_tag="VE844_20025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013220267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="urate hydroxylase PuuD"
                     /protein_id="HZC03548.1"
                     /translation="VPALAEAAADKEGSGPTAITKYIMPRALQWFRWAAVVTWLSGAA
                     YLGRDFMSAFTLGIGTNNPALTVIGMGAWLGTIMVLNVWFLIWPNQKKVLGLVHATDE
                     EKARARRVAFLASRTTMMLSIPMLLFMGAASHGLPF"
BASE COUNT          864 a         1066 c          998 g          784 t
ORIGIN      
        1 tcttggaagg ttgcggcatc ccatgtcaaa tggagagacg tcgactacac ccatcaacgc
       61 ccctcccatc gaaacatcgg aacgaggata gcacgatgaa cgatgccgct cgaaaaataa
      121 ataacatcgc gtccccgccg gcggtgagcc taagaaagga aaacaacagt acggattcga
      181 ctatacttag aacataggcc aatagtacaa accttagtaa cctggtttat gcaacgatgc
      241 ttacatggcc atgtctactg cgcccctccg tatcctcacg gcagtgccga tctgcgatgg
      301 gcgcgacagt gctatccata ctatcaatct tgaactcgcc cgccacggcg ttgaggttat
      361 ctacttaggc tatcatcgct ccgcaccgac gatcgttcgc gctgccatcc aggaagacgt
      421 acgcgctatt gggatctcga gctataacgg tgggcatatc gagttcttca aagaagtcat
      481 tgacctgctt aaagcgcgcg gtgtagcgga catcggggtg tttggcggtg gcggcggcac
      541 gattacccat ggagatgcag agatcatgta tgcacatggg atagatcgga tcttctttgc
      601 cggaacctct ttaggcgaga tcacagaatt tgtgatccaa acctacggtc actcagagca
      661 gaaccgctct atcgagccgc aatgggatcc tcaccccgat cggcggctgg ctaaactgct
      721 caccgcagca atagataagc tgggcggtac aacctcgctc tctccttggc cggcttcaac
      781 aattcagccg ctgaccatcg gtttcagtgg tccaggaggg gcgggcaaga ctaccttgat
      841 cgatgagatc gtgttgcgcg ccctcatggc gtatcccctg gcgaagatcg ccatcctgtc
      901 gcatgatcct agccttgtgg gaaagggtgc gctgctcggt gaccgcgctt ctatgatcta
      961 cgcccaagat aaccgcgtgt tcatgcgtag ccttgccacc cgcggacaag caggtgggct
     1021 ggccgaggcg acggcgcgct gtctccacgt gctaaaacag gccgaatcga atggcagcgc
     1081 cttcgatctg atcctggttg aaaccgtcgg cattggccag gaggccgctc ctttccaaaa
     1141 tgccctggtt gataagacag tcctggttat gggacccgat taaggcagcc gtttgcaact
     1201 tcaaaagatc acgctgctcg atctagtcga catcgttgtg gtcaataaag cggattggcc
     1261 gggcgcaagc acggccttga ccgaactgga atatcgtttg acgctcaatc accgcgatca
     1321 aaagctcatc gcgacggtcg ccaaacatca tcgggatccc ggggtggatc agctttaccg
     1381 gttactgggc agcacgtaaa aaaacaagct tcaaagatag gccaaatata aaccactgtc
     1441 actaggagca ctatgagcat cctggctccg atcaaccagg ccatcgagac gcacaaccgc
     1501 catgttgcgg cacaaatcca gcgtgcccgc accgatccgg cattccagca agaattgctg
     1561 actcactgga aagccatcca aagcagaatc gagacggtga ccacgccaac cggtttaaaa
     1621 ctgccacggc tcgcgcttcc acagaccgat gagccgggtg agattgcccg ttacctgtat
     1681 ggtgagggat tgccgggaga atttcccttt gtcaatggca tctacccgga gatgtacctc
     1741 gaccccctcc tgagctccac cttggtaagg gagaggtaga gagggagtga agaacctacc
     1801 cggctctttg cggggctgga tctggccgaa gataccaata aacggttcca tacgctgacc
     1861 aagtaccaaa agaatatccg cctgagcaca gcgttcgacg gccccaccct gtacggactc
     1921 gacagcgatg cggagggggt ctttggcaag atcggcgaag gcggtgtcgc tatcgctacc
     1981 atcgatgaca tggagcagct ttatgcgggc tttgcactcg gcgatgcgca tttctccgta
     2041 tcgatgacca tcaatggtcc tgcgcctatc cttctggcca tgtatgtagc tgcggctaag
     2101 cggcgttttg gtcctcaagt attacccaaa ctccgcggca cgattcaggc ggatgtgctc
     2161 aaagaggttc aggcgcaaaa cgagatgatc tttcccctgg agccttcgct ccgttttctg
     2221 accgacatgg tcgagtatgt aacgcaccat atgccccgct ggtacccaat ttcgatcagc
     2281 ggctaccaca tcgccgaagc gggcgcgaca ccgatacaac aagcggccta cacactggcc
     2341 aacggtttta cctatgtcga gctgtttcga gaacgcgggc ttgaggtcaa ccgatttggt
     2401 ccaaagctgt cgtttttttt ggattgtggc ctggatatcg aatacctggc gctcgcacgc
     2461 gtctgtcgca agctttgggc catcggcatg cgcgaggtgt tccacgccga tccccgcagc
     2521 caacgcctgc ggttgcacac ccagacgagc ggctgttcac ttgtcgtcag cacgtttaag
     2581 aataacctca cccgtactgc cgtggagctg atgctcgctt acatcaatgc taccaactcg
     2641 tgtcatagca atagcgcgga tgagcccttt accaccccaa gcaccgaata tgtccaactc
     2701 gccgcccatg cgcaggctat tctgctcgag gagacgggca tgtttaaatt catgatgaat
     2761 acgttggccg gttcgccggg catgcaaatc gtcgagcgcg ccgtcgagca aggtatcgtc
     2821 tccgaattgg ccgagatcga ttgtcttggg ggggtgctcg ccgcgattga acaacgctat
     2881 cagcgcagtc agatccaggc ttccgcccat cgctatgagc agcaaatcta caccgacata
     2941 cgaccgatca tcggcttgaa ccgctatcac agcgatatgg agccggtgac agacgtccgg
     3001 ctggtccgga cacctgcggc gcgtaagcaa ttgcagatcg agcgactgca agccttcaaa
     3061 cgccgccacc aagaacaggc tcagcgtgcg ctggataagc tcgcccaggt agtcgagggt
     3121 aacggcaatg tcttcgccga attactccat accgtggggg tgtgttcctt ggggcagatc
     3181 acggagcggt tggcggcgat cgtcgggcgt taccggccga gtgtatgagc tttttctact
     3241 gggtaaagat aactccactg tgctcgtcgt gacatttcag tcactataga ctctcagaat
     3301 ggcaagccgt gagaagcggc ccccataaac aaaagcatgg gaatagacag catcatagtg
     3361 gtgcgggagg cgagaaacgc tacacgtctg gccctggcct tctcttcatc ggtggcgtga
     3421 accagaccca ataccttctt ttgattcggc cagatcagaa accatacgtt caataccatg
     3481 atcgtaccca gccatgcacc cattccgata accgtaagcg cggggttgtt cgtacctata
     3541 ccgagggtaa aggcactcat gaaatctctt cccaaataag ccgctcccga taaccaagtg
     3601 accacggcag cccagcggaa ccactgcaaa gcacgaggca tgatgtactt ggtgatcgcc
     3661 gttggtcccg atccttcctt atcggccgcg gcctcggcga gtgccggcac gt
//
LOCUS       DASQSL010001987         2117 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_53812, whole genome shotgun sequence.
ACCESSION   DASQSL010001987 DASQSL010000000
VERSION     DASQSL010001987.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2117
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53812"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..111
                     /locus_tag="VE844_20030"
     CDS             <1..111
                     /locus_tag="VE844_20030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006893088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CreA family protein"
                     /protein_id="HZC03549.1"
                     /translation="DEKRHTLVYIAISTKVIEGSPMNSISTVPITRWDNP"
     gene            118..1041
                     /locus_tag="VE844_20035"
     CDS             118..1041
                     /locus_tag="VE844_20035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HZC03550.1"
                     /translation="MSSHLAVIVNPSSGASNNQNLQNRLTKSLSTARDREVRILLAGN
                     GEEISELAERAVAEGADPVVAGGGDGTLNAVASVLIGTERTLGVLPLGTLNHFAKDLN
                     IPLDVEGAVRTLIEGTVAQVDVGEVNGRIFLNNSGLGLYPHIVRHREKLQDRLGHGKW
                     PAFLWAVLSVLRRYPFLAVRMSTDEQAFVRRTPFVFIGNNEYAIDGLNVGGRKRLDSG
                     HLCLYTAHRAGRVGLLRFALRALLGRLRHEKDFDALCTQEVFIETKRTRVHVATDGEV
                     TVMRTPLYYRIRPGALRVLVPRSAESVQNAG"
     gene            1041..1886
                     /locus_tag="VE844_20040"
     CDS             1041..1886
                     /locus_tag="VE844_20040"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008118379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HZC03551.1"
                     /translation="MRTLIHLSDLHFGRIDHAIVRPVIDTVQKIKPDLVAVSGDLTQR
                     ARSAQFREARAFLDALPGPQIVVPGNHDVPLYNLFARFLRPLSKYQRYITDDLEPFYT
                     DAQIAILGLNTARSLTIKHGRINEHHIARIRERLSGYGEEITKIIVTHHPFHFPDLPD
                     RQNVYDLVRGASEAMETLAHCRIDVLLAGHLHRSHTGHTAERYTMAGYSALVVSAGTA
                     TSTRSRGEGNSFNVLRIEHPRIQVIRFEWQPRCAAFRSSRAEDFAHTPQGWMRLKGTA
                     WTPQA"
     gene            complement(1911..>2117)
                     /locus_tag="VE844_20045"
     CDS             complement(1911..>2117)
                     /locus_tag="VE844_20045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03552.1"
                     /translation="WQPFIGASLGVQYGSGVKDAFFIGPEIGAKYYVMPKTFIIGQVA
                     YQFQVDQDIDDGSTFYNLGIGFNF"
BASE COUNT          427 a          650 c          601 g          439 t
ORIGIN      
        1 gacgagaaac gccatacgct cgtatatatc gcgatcagca ccaaggtcat tgaaggctcg
       61 ccgatgaact cgatctctac ggtgccgatc acgcgctggg acaatccgta aggctctatg
      121 tcctcgcacc ttgcggtcat cgtcaatcca tcctctggcg ccagtaataa ccaaaatctg
      181 cagaaccgtc tcacaaagtc attgagcact gctcgagaca gggaggtgcg gatcctgctc
      241 gcgggtaatg gggaggagat tagcgagctc gcagagcgtg cggtcgccga gggcgccgat
      301 ccggtagtgg cgggtggggg tgatggcacc ctcaacgcgg tggcctcggt actgatcggg
      361 acggagcgca cgcttggggt gctaccgctc ggtacgctca accacttcgc caaggatctg
      421 aatattccgc tcgatgtgga aggtgcggtg cgcaccctca tcgagggtac agtggcccag
      481 gtggatgtcg gtgaggtcaa tggccggatc tttctcaata attcaggtct gggcctctat
      541 ccgcatatcg tgcgccaccg cgaaaagctg caagatcgcc tcgggcatgg caagtggccg
      601 gcgtttctct gggcggtgtt gagcgtgctg cgccgctatc cgtttctcgc ggtgcgcatg
      661 agcacagatg agcaggcctt cgtgcggcgc accccgtttg tctttatcgg taacaacgaa
      721 tacgcgatcg acggcttgaa cgttggcggg cgaaaacgtc tcgatagcgg gcacctgtgt
      781 ctatataccg cccaccgtgc tgggcgcgtg ggtcttttgc gctttgccct gcgcgccctc
      841 ttaggcaggc tgcgccatga gaaggatttc gacgcactct gtacccaaga ggtcttcatc
      901 gagaccaagc gtacccgggt gcatgtggcg accgacggtg aggtcaccgt catgcgcacc
      961 ccgctctatt accgcattcg ccccggcgcc ctacgcgttt tggtcccacg atccgcggaa
     1021 tcggtgcaaa acgccggctg atgcgcaccc tcatccatct ctcggatctg cattttggcc
     1081 gcatcgatca cgctatcgtc cgaccggtga ttgacaccgt gcaaaagatc aagcccgatc
     1141 tcgtggcagt ctcgggggat ctgacccaac gcgcgcgcag cgcccagttc cgagaggcac
     1201 gtgcgtttct ggatgcgctc ccagggccac aaattgttgt gcccggcaat catgatgtgc
     1261 ccctgtataa tctgttcgcg cgctttctcc ggccgctctc taaataccaa cgctacatta
     1321 cagacgatct cgagccgttt tacacggatg cgcagatcgc tatcctgggt cttaataccg
     1381 cgcgctcact aaccatcaag catgggcgca tcaacgaaca ccacatcgcc cgcatacgcg
     1441 agcggctgtc cggctatgga gaggagatca ctaagatcat cgttacgcac catcctttcc
     1501 atttccccga tttacccgat agacagaacg tgtacgactt ggtccgcggc gcatcagagg
     1561 cgatggaaac gctcgctcac tgtcgcatag acgtgctgct cgcgggccat cttcatagga
     1621 gccacaccgg ccacaccgcc gagcgctaca cgatggcggg atacagcgcg ctcgtcgtca
     1681 gcgcgggcac cgccacctcc acccgcagcc gcggtgaggg taattccttc aatgtgctgc
     1741 gcatcgagca tccacgcatt caagtcattc gctttgaatg gcaaccccgc tgcgctgcat
     1801 tcagatcgtc tcgcgccgag gattttgccc atacccctca agggtggatg cggcttaagg
     1861 ggacggcctg gaccccgcaa gcgtgatcca ggccatatct cctcagtctc ttagaagtta
     1921 aagccaatac ccaagttgta gaaggtcgag ccgtcatcga tatcctggtc tacctgaaac
     1981 tgataggcga cctgaccgat gatgaaggtc ttcggcatga cgtagtactt ggccccgatc
     2041 tccggaccga tgaagaacgc atctttcacc ccggagccgt attggacgcc caggctggcg
     2101 ccgataaaag gctgcca
//
LOCUS       DASQSL010001988         1659 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_81947, whole genome shotgun sequence.
ACCESSION   DASQSL010001988 DASQSL010000000
VERSION     DASQSL010001988.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1659
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81947"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..360
                     /locus_tag="VE844_20050"
     CDS             <1..360
                     /locus_tag="VE844_20050"
                     /inference="COORDINATES: protein motif:HMM:NF024636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2TM domain-containing protein"
                     /protein_id="HZC03553.1"
                     /translation="LGHRPTLVKDGWTAKPKEELAMEDHQQRYERARARVQAIKGFYV
                     HASVFVVVNIGLFVINALTTGLAGGVWWFYWPLLGWGIGLGAHALGVFGFGGGGPWGR
                     DWEERKTREMMDREGGS"
     gene            357..659
                     /locus_tag="VE844_20055"
     CDS             357..659
                     /locus_tag="VE844_20055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012475144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03554.1"
                     /translation="MRKQTVTRKDHSAPGRQAAFGRVAIGRVATGAGALGALAVGAGA
                     FGALAIGALAIRALAIKRGRIERLNIGELEVGRLHVRELVVEQEQTPRQDASVSPS"
     gene            694..1125
                     /locus_tag="VE844_20060"
     CDS             694..1125
                     /locus_tag="VE844_20060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012185051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03555.1"
                     /translation="MSPQSRLVAGIVLIIVPTVEIGGASILSLLIADPAYAQNDLRQD
                     LWRAGHAHGGVWLVLSLVALRYVDEATLSEGMRWVVRVAFPIAAVLMALGFFLSVLSP
                     EATEPNALINLTFVAGLLLAVGLLVLGVGLIRGRRPASEPT"
     gene            1187..1525
                     /locus_tag="VE844_20065"
     CDS             1187..1525
                     /locus_tag="VE844_20065"
                     /inference="COORDINATES: protein motif:HMM:NF014479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="muconolactone Delta-isomerase family protein"
                     /protein_id="HZC03556.1"
                     /translation="MQYLVTEELINPGPLLPPDQLVGIMRQWVLPSMDTLINLKSEGK
                     IIAGGVPVGERALVLIFEAESNEELDSILQRLPLWGLAKWKVTPLENLEGRTARDRQF
                     IEQLEQSLQS"
BASE COUNT          339 a          422 c          550 g          348 t
ORIGIN      
        1 cttggccatc ggcctactct agtaaaggat ggctggacag ctaaaccgaa ggaggagcta
       61 gctatggagg accatcaaca gcgttacgaa agggcacggg ctcgcgtgca ggccatcaaa
      121 ggcttctacg tccacgcgag cgtcttcgtg gtggtcaaca tcggtctttt tgtcatcaac
      181 gcccttacca ccgggctcgc gggcggggta tggtggtttt actggccgct ccttggctgg
      241 ggcatcggct tgggagcaca cgccctgggc gtcttcggct tcggaggggg cggtccttgg
      301 ggccgcgatt gggaggaacg caagaccagg gagatgatgg acagggaagg aggatcatga
      361 gaaagcagac ggtaacacgg aaggaccatt cggcccctgg gaggcaggcg gccttcggtc
      421 gggtggcgat cggacgggtg gctacagggg ctggggcgct cggggctctg gcggtgggag
      481 cgggcgcgtt cggagcactg gccatcggcg ccctagcgat tagggcactg gctatcaaga
      541 ggggcaggat cgagcgcctc aacatagggg agttagaggt gggcaggctg cacgtaaggg
      601 agctggtcgt cgagcaggaa caaacgccac ggcaagacgc gtcggtgtcg ccctcatgaa
      661 cagcgttctt acctggagca cctaaggaga gagatgagtc cacagtctcg cctggtagca
      721 ggcatcgtac taatcattgt ccccacggta gagatcggcg gggcgagcat cctctctttg
      781 ctcatagccg atcccgccta cgcccagaac gacctcaggc aggacctctg gagagccggt
      841 cacgcccacg gaggcgtgtg gctcgtgctc tccttggtgg ctctacgcta cgtggacgag
      901 gcgacccttt ctgaaggcat gaggtgggtg gtgagagtcg ccttcccgat tgcggcagtc
      961 ctgatggcgt taggcttctt cctgtcagtc ctctcccctg aggcgacgga gccaaacgcg
     1021 ctgattaacc tgactttcgt ggccgggctt ttgctggcgg tagggctttt ggtgttgggg
     1081 gtcggtctca tccgggggcg taggccggcg agcgaaccca cttaaccatc cgaaaggatt
     1141 agtacccgcc tagacagagc gggatgggaa aggagcaagc tctaggatgc agtacctcgt
     1201 aaccgaagag ttgatcaatc cggggccgct acttccccct gatcagcttg ttgggataat
     1261 gcgccaatgg gttcttcctt ctatggatac tcttataaac ctgaaatcag agggcaagat
     1321 tattgctgga ggggttccag tcggagagag ggctctagtg cttatctttg aggcagaatc
     1381 caatgaagag ttggacagta tcttgcaaag gttgcctcta tgggggttgg caaagtggaa
     1441 agtaactccg ctagagaacc tcgaaggtag gactgcgcgt gaccgccaat tcattgagca
     1501 gttggagcag agtctgcaga gctaagaagc actcacgcta gagtggagcc ggggctttta
     1561 gcagcctcgg ctcttcttct cgtccttatt caccggagtg cgtggaatag taattctgcg
     1621 aacttcgtct tgacggcttt tccaagaagt tcctcaatg
//
LOCUS       DASQSL010001989         1684 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_164047, whole genome shotgun sequence.
ACCESSION   DASQSL010001989 DASQSL010000000
VERSION     DASQSL010001989.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1684
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164047"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            167..1480
                     /locus_tag="VE844_20070"
     CDS             167..1480
                     /locus_tag="VE844_20070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03557.1"
                     /translation="MSALRPDNATLFKRSPDPMNSGRQKSPPTQLSLPAVVHKSELSA
                     VPDYISAEVFLENSGFFTPSSKRVRGIYTKEKVVGEKPHPDGTVRVIKTKISANYELG
                     LPITSDFDYYRAFLKVCDEIVDRDGRFRLPITVPARQLMRYAGKVESPKERQEVKQWF
                     ERMTGTLIKGGLYRAKHKDYDDGFVGTVFSQVILRGKPLKNGKVADTNYVWPSPWFLS
                     NYFYRHLKSIDFNLHQRLRKPIAKALYPLLETGWYASGGNPYAKSYRDLCQEFLLADR
                     KHISRIKEQLDPSHRELARERFLARWEYRKAANQEDYIVTYWPGHKFFEDQQAREIRR
                     QLAEQLTQKPERRTHAEETLLDGTEQALLDEILATCGDRDNRTAYIKVIREYPDGLLW
                     MALSETRQTSREGRIKKTRGAYFMATVKDLAARWAVAQTTLDVIS"
     gene            complement(1538..>1684)
                     /locus_tag="VE844_20075"
     CDS             complement(1538..>1684)
                     /locus_tag="VE844_20075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015213505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HZC03558.1"
                     /translation="NIERFNNTLRQRVSRLAREALSFSKELANHIGAIKLFICHYNLT
                     RTAA"
BASE COUNT          404 a          501 c          465 g          314 t
ORIGIN      
        1 aggaaatagc ctcggggatt taaggaaata gcctcgggga tttaaggaaa tagcctcggg
       61 gatttaagga aatttctata cggaaaaacc atttattttc aaggtcttcc atggttttcc
      121 acaagctcgc atagctttct catagatatt ttcataacgt tctcatatgt cagcccttcg
      181 gcctgacaat gcaacgctct ttaaacgttc tccggaccct atgaactcgg gacgacagaa
      241 atcaccaccg acacaactga gcttaccagc cgtcgtccat aagtcggagc tctcagcagt
      301 ccccgactat atctctgccg aggtcttcct cgagaacagc ggcttcttca cgccttcaag
      361 caaacgggtc cgaggcattt acaccaagga gaaagtcgtc ggggaaaagc cgcaccccga
      421 cggcaccgtt cgcgtcatca agaccaagat cagcgcgaat tacgagctcg gcctgccgat
      481 cacctccgac ttcgactact accgggcctt cctcaaagtg tgcgacgaga tcgtcgaccg
      541 cgacggccgg ttccgcctgc cgatcaccgt cccggcgaga cagctgatgc gctacgcggg
      601 aaaagtggaa agcccgaagg agcggcagga agtcaagcag tggttcgagc ggatgaccgg
      661 caccctcatc aagggggggc tctaccgcgc caaacacaaa gattacgacg acgggttcgt
      721 cggcacggtg ttcagccagg tgatcctccg cggcaaaccg ctgaagaacg ggaaagtggc
      781 cgacacgaac tacgtctggc cttccccgtg gttcctgtcc aactatttct accgccacct
      841 caagtccatc gatttcaacc tgcaccagcg cctgcggaaa cccatcgcca aggcgctcta
      901 tccgctcctg gaaacgggat ggtacgcgtc tggcgggaac ccgtacgcca agagctaccg
      961 cgatctgtgt caggaattcc tgctcgcgga ccgcaagcac atttcgcgca tcaaggagca
     1021 gctggacccc tcgcaccgcg agctggcgcg cgagagattt ctcgccaggt gggagtaccg
     1081 caaagcggcg aaccaggagg actacatcgt gacctactgg ccggggcaca agtttttcga
     1141 ggaccagcag gcgcgcgaaa tccgccggca actggcggag caactgaccc agaagcccga
     1201 gaggcggaca cacgctgagg agaccctgct ggacggcacc gagcaggctc tccttgatga
     1261 aatcctggcc acttgtgggg atcgagacaa ccgcacggcg tatatcaagg tcatccgaga
     1321 atacccagac gggcttctct ggatggcact ttccgagacg cgccaaacca gccgtgaagg
     1381 ccgtattaaa aaaacccgag gggcctactt catggcgacg gtgaaagacc tcgccgcccg
     1441 ctgggcggtc gcccagacca cattagacgt gataagctga cgacgtcgga aatacgtacg
     1501 attgccgttc ggtagtgcac tccatgtaat gctcgctcta cgccgcagtt ctcgtcaggt
     1561 tgtagtggca gatgaagagc ttgatggcac cgatatggtt ggcaagctcc ttggaaaatg
     1621 acaacgcctc gcgcgccaga cgggacacgc gctgccgcaa ggtgttgttg aaacgctcaa
     1681 tgtt
//
LOCUS       DASQSL010001990         2662 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_94441, whole genome shotgun sequence.
ACCESSION   DASQSL010001990 DASQSL010000000
VERSION     DASQSL010001990.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2662
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94441"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..451
                     /locus_tag="VE844_20080"
     CDS             <1..451
                     /locus_tag="VE844_20080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZC03559.1"
                     /translation="LVIRYLFHGFPKQRPGRIVTMGTPHQGSSAAASLSHTLSGRLLL
                     GESFEHGLSGDVPPWTNRHEIGIIAGSAGIGMGLLITYLSRPNDGTVAVVETYLPNAT
                     DHITIPVSHVGMLLSDEVIYQTRCFLRHGRFDPRNDQSFLWAQKGKC"
     gene            492..1235
                     /locus_tag="VE844_20085"
     CDS             492..1235
                     /locus_tag="VE844_20085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018690612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HZC03560.1"
                     /translation="MAGHSKWANIQHRKGKQDAKRGKLFTKLIREITAAARLSGSDPA
                     ANPRLRTAIDTALANNMTRDTIERAAMRGSGGMEGESLEEVRYEGYGPGGVAVMVECM
                     TDNRNRTVSEVRHAFAKAGGNMGTDGSVSYLFKKQGVLSYPKGADEAVIMAAALEAGA
                     DDVVVNDDDSVDVLIAPEEFGRVQDTMTAAGLTPEVAQVTLRASTNVSLAFEEAQKMV
                     RLLETLEDLDDVQNVYSNADISEEVLARL"
     gene            1250..1765
                     /gene="ruvC"
                     /locus_tag="VE844_20090"
     CDS             1250..1765
                     /gene="ruvC"
                     /locus_tag="VE844_20090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013031282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HZC03561.1"
                     /translation="MRILGIDPGSRVTGYGVIDMEGGRAVHVASGCISVHDARLAMRL
                     KTIFEGVTEVVQEYLPQEMAVEIVFMNRNADSALKLGQARGAALVAGVNQRLPVFEFT
                     PAQIKQAIVGRGNADKVQVQYMVRVLLGLAHTPPTDAADALAVALCQGHTRQSLLQMR
                     SIRGRRGGRFL"
     gene            1762..2370
                     /gene="ruvA"
                     /locus_tag="VE844_20095"
     CDS             1762..2370
                     /gene="ruvA"
                     /locus_tag="VE844_20095"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013031283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HZC03562.1"
                     /translation="MIGRIRGLLIEKKPPFILLDVQGIGYELEAPMTTFYRLPELNTE
                     LSLYTHLLVREDGHLLFGFLTEDERRLFRALLKVNGVGARLALTILSGTGADEFASCI
                     HTADIARLSRLPGVGKKTAERLIVEMRDRLADWATLPSVFSADTRAASIPDAVADAIS
                     GLIGLGYKPQEASRQVHAIDTEGLTSEAIIRAALKALAKSKG"
     gene            2378..>2662
                     /locus_tag="VE844_20100"
     CDS             2378..>2662
                     /locus_tag="VE844_20100"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013031937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HZC03563.1"
                     /translation="MATLFNTVVEAPTEAGQRTRYSIIIPTLNESACIIGALSSLQGM
                     RARGHEIIVVDGGSHDRTLALARPLVDRVCVSPPGRARQMNTGAALARGEV"
BASE COUNT          545 a          755 c          828 g          534 t
ORIGIN      
        1 cctggtcatc cggtatctgt ttcacggctt ccccaaacaa cggccaggcc ggatcgtgac
       61 tatgggaacg cctcaccagg gaagtagcgc cgctgcgagc ctctcgcaca ccctttctgg
      121 ccggttactt ttgggcgaga gtttcgagca tggcctctcc ggcgatgtgc ctccctggac
      181 caataggcac gagatcggga taattgcagg cagcgcaggc atcggcatgg ggcttcttat
      241 cacttatcta agccgcccca atgacggtac ggtcgccgtg gtcgaaacct acctccccaa
      301 cgccacagat cacatcacga tccctgtctc ccatgtgggc atgctactat ccgatgaagt
      361 gatctatcag acgcgctgtt ttttgcgaca cggcagattt gatcccagaa acgatcaatc
      421 ctttctttgg gcccagaagg gcaagtgtta aactgactgc aatcaagtca actttgagat
      481 gtaacaagca catggcagga cacagtaaat gggccaacat ccagcatcgc aagggcaaac
      541 aggacgccaa gcgcggcaag ctgttcacga aactgatccg ggagatcact gcggctgccc
      601 ggctcagtgg cagtgatccg gcggctaatc cgagacttag gaccgcaatc gatactgcat
      661 tggccaacaa catgacccgg gacaccatcg agcgcgcggc catgcgcggc tcagggggga
      721 tggagggtga gagcttagaa gaggtgcgct atgagggcta tggtcctggc ggggtggcgg
      781 tcatggttga gtgtatgacc gacaaccgta accgcacggt ctcggaagta cggcatgcct
      841 tcgctaaagc gggggggaac atgggcaccg atggttcggt gtcctacctg ttcaagaaac
      901 aaggggtctt aagctacccc aagggcgccg atgaagcggt gatcatggcg gcagcacttg
      961 aagcgggagc tgacgatgtg gtcgtcaacg acgacgattc ggtcgatgtc ctgatcgctc
     1021 ccgaggagtt cggccgggtc caggatacca tgactgccgc cggcctcacc ccggaggtgg
     1081 ctcaagtgac cctgcgggcc tcgaccaatg tctcgctcgc ctttgaagag gcgcaaaaga
     1141 tggtgcgttt gctcgagacc ctggaagatc tggatgatgt ccagaatgtc tactcgaacg
     1201 ccgatatcag cgaagaagta ttggcgcggc tctgattacc ttgacgggga tgcggatcct
     1261 cggcatcgac ccaggctccc gggtgacagg ctatggggtc atcgatatgg agggaggtcg
     1321 cgcggtgcat gtggcgagcg gttgtatttc ggtgcacgac gcacgcttag cgatgcggct
     1381 caagaccatc ttcgaagggg tcacggaggt tgtccaggaa taccttcctc aggagatggc
     1441 ggtggagatc gtatttatga accgcaacgc ggactcggcc ttgaaactgg gtcaggcccg
     1501 gggtgcggcg ctggtcgcgg gtgtcaacca gaggctgccg gtcttcgaat ttacccccgc
     1561 ccagatcaag caggccatcg tgggccgggg caacgctgac aaggtccagg tccagtatat
     1621 ggtcagggtc ctgttggggc ttgcgcacac accgcccacc gatgcggccg atgcacttgc
     1681 ggtcgcgctt tgccagggcc atactcggca gagtctcctg cagatgcgca gcatacgcgg
     1741 gcggcggggt gggagattcc tatgatcgga cgcatccgtg gtcttctgat agaaaaaaag
     1801 cctcccttta tcctgctcga tgtccagggg atcggctatg agcttgaggc gccgatgacg
     1861 accttctatc ggcttcccga gctcaacacc gagctcagcc tctacaccca tcttctggtc
     1921 cgcgaggacg gccatcttct gtttggcttt ctcaccgaag atgaacgccg gctgttccgg
     1981 gcactgctca aggtcaatgg cgtaggcgca cggctcgcgc ttacgattct gtcgggcacc
     2041 ggcgccgatg agttcgccag ctgcattcat accgccgata ttgctcgctt gagtcggttg
     2101 cctggggtgg gtaagaagac cgccgagcgc ttgattgtgg agatgcgtga ccgactggcc
     2161 gattgggcca ccctcccttc ggtcttcagt gcggataccc gcgcggcttc tatccccgat
     2221 gccgtagctg atgccatcag cggccttatc ggcttgggtt acaaacccca ggaggcgagc
     2281 cgccaggtcc atgctatcga tacggagggg ctcacgagcg aggcgatcat ccgtgcggca
     2341 ttaaaggctt tagccaagag caagggataa aaccggtatg gcgacgcttt tcaatacagt
     2401 cgttgaggct cctacagaag ccggccagag gacccggtat tccatcatca tcccaacgct
     2461 caatgaatct gcatgcatca tcggcgcgct tagttcgctc caggggatgc gtgcgcgagg
     2521 gcacgaaatc atcgtggtcg atggaggcag ccatgaccgc acattagcac tggccaggcc
     2581 gttggtggat agggtgtgcg ttagcccacc gggccgcgct cggcagatga ataccggggc
     2641 cgcccttgcc aggggcgagg tc
//
LOCUS       DASQSL010001991         1400 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_119644, whole genome shotgun sequence.
ACCESSION   DASQSL010001991 DASQSL010000000
VERSION     DASQSL010001991.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1400
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119644"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..667
                     /locus_tag="VE844_20105"
     CDS             <1..667
                     /locus_tag="VE844_20105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015897708.1"
                     /note="back-translocating Elongation Factor EF4; binds to
                     the ribosome on the universally-conserved alpha-sarcin
                     loop; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HZC03564.1"
                     /translation="TDGTVISVDNPAKLPPPQAIATIEEPYILGTILTPPEFLGAVLQ
                     LAQEKRGVQRKLHYPEPKIALLTYEFPLNEMVFDFYDRLKSVSRGYASFDYEFMGYQA
                     ADLVKLDILINGEPVDALSSVIHRDKAYFYGRDLAKKMREVIPRQLFEVAIQAAVGSR
                     VIARETVAPLRKNVTAKCYGGDITRKRKLLEKQKEGKKRMKRVGRVEIPQEAFVAVLQ
                     VGR"
     gene            704..1297
                     /gene="lepB"
                     /locus_tag="VE844_20110"
                     /pseudo
     CDS             704..1297
                     /gene="lepB"
                     /locus_tag="VE844_20110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004513336.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
BASE COUNT          295 a          407 c          423 g          275 t
ORIGIN      
        1 aaccgacggc acggtcattt cggtggacaa ccctgccaag ctgccgccgc cgcaggccat
       61 cgccacgatc gaggagccct acatcctggg cacaatcttg acccccccgg aattcctggg
      121 ggcggtcctg cagctggcgc aggagaagcg cggcgtccaa cgcaagctgc actaccccga
      181 gcccaagatc gcgctgctga cgtatgaatt ccccctcaac gagatggtgt tcgatttcta
      241 cgaccgcctc aaatcggtgt ctcgtggcta tgcctccttc gattacgagt tcatgggcta
      301 ccaggcggcc gacctcgtga agctggatat tttgatcaat ggcgaacccg tggatgcgct
      361 gtcatcggtt atccaccgcg ataaagccta cttctatgga cgcgacctgg cgaagaagat
      421 gcgcgaggtg attccgcgcc agttattcga agtcgccatt caagcggccg tcggctcccg
      481 ggtgatcgcc cgcgagacgg tcgcgccgct gcgtaaaaac gtcacggcca agtgttatgg
      541 tggggatatc actcgcaaac ggaagctgct cgaaaagcag aaagaaggca aaaagcggat
      601 gaaacgcgtc gggcgggttg aaattcccca ggaagcgttc gtggcggtgc tacaggtcgg
      661 gcgctgagca cagagctcgt caggcgcgtg accagacaac aggatgacat cggtgcagac
      721 actagacaaa gcctcgggcc gacggaaatc ggctgttcgg gagtatgccg agtcgatcat
      781 catcgccgtg gtgctggccc tggtcattcg aacctttgtc gtacaggcat tcaagatccc
      841 ctcggggtcg atggaagact cgctcctcat cggcgatcat atcctggtca acaaactgtc
      901 ctacgggatc caactgccta tcgtagactc gaaaatccgc ccactgggcc ttgccggtga
      961 tccgcagcgc ggggacatca tcgtcttccc cttcccccgc gacccgtcac gggattttat
     1021 caagcgcgtc gtggcgctgc cgggcgagcg tatcgaagta cgcaatcacc gcgcttacgt
     1081 caatggcgag cctctgaaag agccctatgt gaagctcgat gagcgtgccg ccatgcagcc
     1141 gtcgcgctat agccactggg ggcctgaagt ggtgccgccg ggcaagctgt ttgtcatggg
     1201 ggacaaccgg gataacagtg cggatagccg ggattggggt tttctggaca gcgagcaagt
     1261 gaaaggacgg gctttcatca tttactggtc gtgggacagt tccgagccaa agctcatctg
     1321 gctgggcaat atccctgtgc cgaatcccaa ggcgatcttg ctcgatggca ttcggtggga
     1381 acgtatcggg aagctcttgc
//
LOCUS       DASQSL010001992         2002 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_53872, whole genome shotgun sequence.
ACCESSION   DASQSL010001992 DASQSL010000000
VERSION     DASQSL010001992.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2002
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53872"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..989
                     /locus_tag="VE844_20115"
     CDS             <1..989
                     /locus_tag="VE844_20115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03565.1"
                     /translation="QRDHGVKWSCASLRKVVGALRAGMAPHREKAQIDQVVNWVEQAR
                     ASKGRFRPTLSVGRDGIFVPLRGGEAQEGATATVSVLDRHGKRVGTVYLGQMPESGQG
                     TITDQLSDLLKAILTQVDSQNLRLAYVSDEGHHPSTYYHQSLNKMVDPRRPWRQLEWI
                     RIVDFYHACQYVQQLADTIFGTGDEAQQWAKAMRHVLKTKADGVSRVLKSASALRRSR
                     GLGGPVKLYDKAYRYIKRRTQWMRYHLYKRQKLPLGSGITEAACKIVFTQRLKRSGMS
                     WTIEGGQVILDLRVIRLSHVWDEVHRRYLASKPLPVTCVDTDKAAQHQPLAA"
     gene            complement(1008..1829)
                     /locus_tag="VE844_20120"
     CDS             complement(1008..1829)
                     /locus_tag="VE844_20120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03566.1"
                     /translation="MSTVIDFPYRDNFDRHADRHQLWDRFERADLFEHYLDLYTQGVS
                     QRQAAKRLQVPRTTLQAWQSWHDTLDICPHVAQFFQSGPGLACLHRLVLALHLVCVEV
                     GACGIRLVCLLLNLTTLDRFVAASYGAQQQVNRQVEQAIVDYRQTETRRLATDMPRKV
                     ITMTQDETFTGGLCLVAAEPVSNFIILEQLAQARDQDTWKALMAPALAQLNCEVIQST
                     SDEAPGIVAYVEHQLGAHHAPDLFHVQHELSKAVGAPLAAKERAADKALTEAKGV"
BASE COUNT          415 a          527 c          645 g          415 t
ORIGIN      
        1 tgcagcgcga tcatggtgtg aagtggtcgt gcgcctccct tcgcaaagtc gtgggcgcgc
       61 tgcgtgcggg gatggccccg catcgtgaga aggctcagat cgaccaagtg gtgaactggg
      121 tcgagcaggc ccgcgcctcc aaggggcgct ttcggccgac gctgtcggtt gggcgtgacg
      181 gcatctttgt gccgctgcgc ggcggcgagg cccaggaggg cgccacggcc acggtctccg
      241 tgctcgaccg ccatggcaaa cgcgtgggca ccgtttatct agggcagatg ccagaatccg
      301 gtcaggggac gatcacggat cagcttagtg atctgctcaa agcgattctc acgcaggtcg
      361 atagtcagaa cctgcgtttg gcctatgtca gcgatgaggg ccaccatccc agcacctatt
      421 accaccagag tctcaacaag atggtggacc cgcgccgtcc ctggcgtcag ctggagtgga
      481 tacggatcgt cgatttttat catgcctgtc agtacgtcca gcaattggcc gacacgatct
      541 tcggcacggg agacgaggct caacagtggg ctaaggcgat gcgccatgtg ctcaagacca
      601 aggccgatgg ggtgtcgcgg gtgttaaagt cagcgtcggc gctgcgtcgc agtcggggcc
      661 ttggtgggcc ggtcaagctc tatgataaag cctatcgtta catcaaaaga cgcacgcagt
      721 ggatgcgcta tcatctctac aaacgccaga aactacccct gggctctggg attacggaag
      781 ccgcctgcaa gatcgtcttt acgcagcggc tcaaacgctc ggggatgtca tggacgattg
      841 aggggggcca agtgatcttg gacctgcgtg tgatccggtt gagtcatgtc tgggatgaag
      901 tgcatcggcg ctacttggcc tcgaaaccgc ttccggttac ttgcgtcgac acggacaagg
      961 ccgctcaaca tcagccatta gcggcataga agatgggaat ggagcgatca cacccccttt
     1021 gcctcggtga gggctttgtc ggcagctcgc tctttggcgg ccaggggagc accaacggct
     1081 ttgctgagtt catgctggac atggaacaag tcgggggcgt gatgggcgcc aagctggtgt
     1141 tcgacatagg ccacaatccc gggggcctca tcactggtgg actgaatgac ctcacagttg
     1201 agttgggcta gagccggtgc catcaatgcc ttccaggtat cttgatcgcg agcctgagcg
     1261 agttgttcca aaataataaa gttgctcacg ggttcagcgg cgaccaggca aaggccgccc
     1321 gtgaaggttt cgtcttgggt catggtgatg actttgcggg gcatgtccgt ggccaagcgc
     1381 cgggtttcag tttggcggta atcgacgatg gcttgttcga cctgacggtt gacttgttgc
     1441 tgcgccccat aggaggcggc gacaaagcgg tccagagtcg tgaggttgag caggagacag
     1501 accaagcgaa tgccgcaagc accgacttcg acacagacca gatgcagggc taaaacgagc
     1561 cgatgaaggc atgccagtcc ggggccgctt tggaaaaact gagccacatg gggacagata
     1621 tcgagcgtgt catgccatga ctgccaagct tggagagtgg ttctgggtac ctgaagccgc
     1681 ttggcggctt gacgctggga gacgccttga gtgtacaagt cgagatagtg ctcgaataga
     1741 tcggctcgct caaaccggtc ccagagctga tggcggtcgg catggcggtc gaaattgtcg
     1801 cggtatggaa aatcgattac agtgctcatg gctacctctc cctgcaagcc atcgtctcat
     1861 gatgaatgtg atggctaaga atggcgaggt agctctccga ttgcaacctg gaggcggtct
     1921 gtacgtgccg tgttacccgg ctgtttacaa aagtggccga cgacgtgatc gaggcccggc
     1981 tttcaaacgg ctatttttaa ag
//
LOCUS       DASQSL010001993         1268 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_201631, whole genome shotgun sequence.
ACCESSION   DASQSL010001993 DASQSL010000000
VERSION     DASQSL010001993.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1268
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201631"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(86..1087)
                     /locus_tag="VE844_20125"
     CDS             complement(86..1087)
                     /locus_tag="VE844_20125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03567.1"
                     /translation="MARPAFANYVDLIFTLFALFLQQQPVRPHRGHPFEYPHSTFIVC
                     FIIMQLRRIIRFKAQHRWLLTHLDWGQVIGLDRVPHRTTLSRRYKRLYPVLQDFIAFL
                     GQYAEDLDPAFDSRELYEDKSVFKAQGPVWHQSDRLAGHIPAGLRHLDTDATWSKSAY
                     HGWVYGYGLHVTNNRIGFPKLVQVETAAVAESQVLDAKEALILYVLAPNTLTTDDSYT
                     QARRIRRWAQAGGVLLTPALKWVTGRYATAYRRFIREPEQVELSRSRRTAIEPVFDLV
                     AQLTGATDNHKQLPLQRLAKVRTYLALGTLLLQVAMIANSIWGLPLRNISTIMTAFT"
BASE COUNT          277 a          318 c          388 g          285 t
ORIGIN      
        1 aaaatattcc tatttttgtt gttttaaaca ttttaaaaaa atcatatgaa tcgtccatat
       61 ttaattgagg ggtgtgcaca attcgttagg tgaacgctgt catgatcgtc gagatgttac
      121 gtaacggcaa tccccagata ctattggcta tcatagcgac ctgaaggagc aaagtgccca
      181 gtgccaaata ggtccgcacc ttcgccaggc gttgtagcgg caactgcttg tggttgtcgg
      241 tggccccagt gagctgggcc actaagtcaa agacgggctc aatcgccgtc cgtcggctcc
      301 gtgagagctc gacttgctcc ggctcccgga tgaagcggcg gtaagcggtg gcgtagcggc
      361 ccgtgaccca cttgagagcg ggcgtcaaca ggaccccccc ggcttgagcc cagcggcgaa
      421 tccgccgcgc ctgggtatag ctgtcatccg tagtcagggt gttgggcgcc agcacataga
      481 ggataagggc ctctttggcg tcgaggacct gactttccgc caccgcagcg gtttccacct
      541 gcacgagttt gggaaagccg atgcggttgt tggtcacgtg taagccgtag ccgtagaccc
      601 acccatggta ggcacttttg ctccaggtgg cgtcggtgtc gagatggcgc agacccgcag
      661 ggatgtggcc cgcgagtcgg tcgctttgat gccagaccgg tccctgggct ttgaacacgc
      721 ttttgtcttc gtagagttcg cggctgtcaa aggccgggtc caagtcttcg gcatactggc
      781 cgaggaaggc gatgaagtct tgcaacacgg gatagagccg tttatagcgg cgggacaggg
      841 tggtacgatg cgggacgcgg tcgaggccga ttacctgccc ccaatccagg tgggtgagca
      901 gccaccgatg ttgggctttg aatcggataa tgcgtcgaag ctgcatgatg ataaagcaca
      961 cgatgaaggt cgagtgcggg tactcgaagg gatggccccg atgaggacgc accggctgct
     1021 gttgtagaaa gagggcaaac agggtaaaga tgagatcgac atagttagcg aaagctggcc
     1081 tagccactgg gatatctcct gggaaaaagg gttgattctt tcccaagaga gaaccccttt
     1141 cgctggctat gtcaaggttg aacgaattgt gcacacccct catttacttc gacgtggtcg
     1201 ggtagaccac aatgaaattg tcacgatttg gcatcttcac ctgcggtaat gtttgcgcgt
     1261 tcatcacg
//
LOCUS       DASQSL010001994         1495 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_94474, whole genome shotgun sequence.
ACCESSION   DASQSL010001994 DASQSL010000000
VERSION     DASQSL010001994.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1495)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1495)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1495
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94474"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(285..1289)
                     /locus_tag="VE844_20130"
     CDS             complement(285..1289)
                     /locus_tag="VE844_20130"
                     /inference="COORDINATES: protein motif:HMM:NF033547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HZC03568.1"
                     /translation="MLTLSHVHQLFSVETCHAYIHALQWKDRPFQCPHCHSPEVSPWG
                     TYHYRPGFKRYRCQDCGRTFNALTKTLFAQSQRSLAHWIMATFLLCLSCSSRRIAREL
                     GVHIRTSYRWCWWLRHAAVSYEMDRRVEGTVEADELYHTAGKKGQAHQGGTKPLGRRP
                     RRRRKKREPGRGHYDKDRPAIIAWVSRQGPVVVQAVKDFTVATVQQAADLTIEVGSRL
                     YTDSASSYRALKGYHHEFVHHTKKEYARGEVHENRAECLFSLLRPYLRMFRGIGKSNL
                     PGYVGFFQFLRNSRYQHAFEQAEMILQAALDPSVASKARKGEFVTCLDYFDLLQTPIN
                     "
BASE COUNT          335 a          404 c          417 g          339 t
ORIGIN      
        1 tgcatatgaa actaggatga aggctggtaa acgacggagc aagcacatgg agccacccat
       61 atcgcgctac atcgttactc tacgatgtcg aagttggcac atctggcctg gagagttttt
      121 tccaagtaat tatgaaaccg acctaacctg ttgaaatata taagcgtata tcgtcagcgt
      181 ggtttatttg cgatcatcca gtaaaatcca tatgttagaa gaatttcaac gttacctagg
      241 caaaactctc cgacacctta ttgagtttca cctaagttgg tcgctcaatt tatcggggtt
      301 tgtagcaggt caaagtagtc caagcatgtg acaaactctc ccttgcgggc tttgctggca
      361 acagatggat ctaaggccgc ctgcaagatc atctcagcct gctcgaacgc atgctggtac
      421 cgagagttcc gcaggaattg gaagaacccg acgtatcccg ggaggttcga tttgccgata
      481 ccacgaaaca tccgcaggta gggcctcagc aaggaaaaca ggcactccgc ccgattctca
      541 tgcacctcgc cgcgagcata ttccttcttc gtatgatgga cgaattcatg gtggtacccc
      601 tttaacgccc ggtagctact ggccgagtcc gtatagagcc gactccccac ttcgatggtg
      661 aggtcagctg cttgctgcac cgtggcgacc gtaaaatcct tcacggcctg caccacgaca
      721 ggcccctggc ggctgaccca tgcgatgatc gccggccggt ctttgtcata gtggccccgg
      781 ccaggctcgc gcttcttgcg gcgccggcgt ggccggcgtc ccaagggctt tgtcccgccc
      841 tggtgcgctt ggcccttctt gccggcggtg tgatagagtt catccgcttc gacagttccc
      901 tcgactcggc gatccatttc ataggacaca gcggcatggc gcagccacca gcaccagcga
      961 taactggtgc ggatatggac ccccaactcc cgcgcaatac gacgcgatga acatgagagg
     1021 cacaacagaa aggtcgccat aatccagtgc gcaagggatc gctggctctg ggcgaacagc
     1081 gtcttggtca gggcgttgaa ggtccgcccg cagtcttggc agcgatagcg tttgaatccc
     1141 ggtcggtaat ggtaggtgcc ccagggactg acctctggac tgtggcaatg cggacactga
     1201 aacgggcgat ctttccactg tagagcatgg atataggcat ggcaggtttc gacactgaag
     1261 agttggtgta catgcgacag cgttagcatc gctgagaatc tcctgtggtc acgaaatcgg
     1321 tgcgggaata gaggaggaga ttctcagttc tgtatcaagt ttttacgctg ctacaaaccc
     1381 cgataaattg agcgtggcgc gtattacatg gtgtgagctg gctcagcgtt actggttcgc
     1441 cagtggtatc gtggccgtga cacagggctc agcgccatac accgccgtgg tgtgg
//
LOCUS       DASQSL010001995         1221 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_82028, whole genome shotgun sequence.
ACCESSION   DASQSL010001995 DASQSL010000000
VERSION     DASQSL010001995.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1221
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82028"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            136..1149
                     /locus_tag="VE844_20135"
     CDS             136..1149
                     /locus_tag="VE844_20135"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC03569.1"
                     /translation="MAKKGRRATNEERFAAIQMYDNGLTADQIAEILNVGRSSVFDWI
                     ARCREGGLGSISTKFASGRPTVLDDSEMVRLYTMIHGRDPRVHGFGMALWTRALIRDL
                     IKKSFGKDVSLVTVGRILKKIGMSAQRPLYRSWKQDPARVERWKREEYPAIKARAAKE
                     GATVLFADEASVRTDYHAGTTWAPVGQTPVVTGSAVRQAVKMVSAIGQRGELSFQVHE
                     GSMNAERFIEFLQSLVHDCDTPVFLVVDGSSVHKAKIVKQYVASTKGGLELFFLPPYS
                     PELNPDEWVNKNVKHDRIARAVPLTRDDLKAVAVEALERLKTCPRIVRGFFGDPKLAY
                     IHA"
BASE COUNT          251 a          336 c          392 g          242 t
ORIGIN      
        1 aagcttcccc cgaaagcgac ctgacggaac gtcttccacc cgttcacgtt gacaagttct
       61 ttcgggttgg cgggctggta ctaattagtt cgttagtttc tggacttcga agtgctattg
      121 tggaatactt gaggtatggc caagaagggt cgccgggcga caaacgagga gcggttcgcc
      181 gctatccaga tgtacgataa tggactcacc gccgatcaga tcgcggagat cctgaatgta
      241 ggtcggtcgt cggtcttcga ctggatcgcg aggtgtcgtg agggtgggct cgggtcgata
      301 tccacgaaat tcgcgtctgg tcgcccgacc gtgctggacg acagtgagat ggtccgtctc
      361 tacaccatga tccatgggag ggatcctcgg gtccatggtt tcggcatggc gttgtggacc
      421 cgagccttga tcagggactt gatcaagaag tcgttcggca aggatgtctc gctggtcacg
      481 gtgggacgga tactcaagaa gatcggcatg tcggcgcagc ggccgttgta ccggtcctgg
      541 aagcaggacc cagcccgggt ggaaaggtgg aaacgcgagg agtacccggc gatcaaggcc
      601 cgcgcggcga aggagggcgc gacggtcttg ttcgccgacg aggcgtcggt ccggaccgac
      661 taccacgccg gcaccacgtg ggcaccggtg ggacagacgc cggtggtgac cggctcagcg
      721 gtacgccagg cggtcaagat ggtctcggcg atcgggcagc ggggggagtt gagtttccag
      781 gtccacgaag ggtcgatgaa cgccgagcgg ttcatcgagt tcctccagag cctggtccat
      841 gattgtgaca cccctgtctt tctggtggtc gacggctcgt cggtccacaa ggcgaaaatt
      901 gtcaagcagt acgtcgccag caccaaggga gggctggagc tattcttcct cccgccctat
      961 tctcctgagc tgaaccccga cgaatgggtc aacaagaacg tcaagcatga caggatcgcc
     1021 cgggccgtgc cgttgacccg agacgacttg aaggcagtag cggtcgaggc actcgagcga
     1081 ctcaagacat gcccccgaat cgttcgcgga ttcttcggag accccaaact ggcctacatc
     1141 cacgcataat cccatcacat gaatgcagtc cggaaacctt cgttctcctt agtacctgat
     1201 gcggtggatc cgcaagaagt a
//
LOCUS       DASQSL010001996         1092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_94477, whole genome shotgun sequence.
ACCESSION   DASQSL010001996 DASQSL010000000
VERSION     DASQSL010001996.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1092
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94477"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..543
                     /locus_tag="VE844_20140"
     CDS             <1..543
                     /locus_tag="VE844_20140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HZC03570.1"
                     /translation="VAQVPLVNGWGNAQRLMRPDIFDEFLGALAHDRAQRYAGEESAK
                     VPVVAPEGEPSALPTPESYEWFTQLGAAASPNWRNEVSLESMEAFLEYDPAGSIHLIS
                     PTPLLMVVAEKDTLTPTDMAIAAYERPLEPNKLVILEGGKHFDAYTEPGLSQSAPPAV
                     EWFERHLIGRKEAGTRETVS"
BASE COUNT          235 a          309 c          345 g          203 t
ORIGIN      
        1 gttgcgcagg tgccgctggt taacggctgg ggcaacgccc agaggctcat gcgcccggac
       61 atcttcgacg agtttctcgg ggcgctcgcc cacgaccgcg cccagcgata tgcgggagag
      121 gagagcgcca aggtgccggt ggtggctccc gagggagaac cttcggcgct gccgacgccc
      181 gagtcctatg agtggttcac tcagttgggc gcagcggcct cgcccaactg gcgcaacgag
      241 gtctcactgg agtcaatgga ggcgttcctg gagtacgacc cggcggggag catacacttg
      301 atctcgccga cgcccctcct gatggtcgtg gccgagaaag atactctaac gccgacggac
      361 atggccatcg cggcctacga gcggccactg gagcccaaca agctagttat tctggagggc
      421 ggcaagcact tcgacgccta caccgaaccg gggctctccc agtcggcacc cccggcggtt
      481 gagtggttcg agcggcacct gattggacgc aaggaggcgg gcactagaga gacggtttcc
      541 tgaggaggcg aaggaaaaga ggggtgtgca gcatacccgg caacttcgaa gtcggaaggc
      601 ctgcttgaaa gcaggccatt gctttattgg agaagaaatc ggtagtccca gtagcagcat
      661 acagcggttt gcgatgacat tgacccatgc aaacagtgga ttcatgaacg cttacacagc
      721 ccttcagagc aggggtttgc accggtaatg cgatatatgg gtcaaccgca ctgcaaaccg
      781 ctataagagc cgcactattc accgaagtgt atggaagggt gttctcggaa gttggtaggg
      841 atctgaacca aataacaagg ccgggactag acaccccagc cttcgcttgg tccctatggc
      901 gggcaccagt gaacggttcc ttgggtttgt tctagcgccc cctagcggaa gaccaccctc
      961 tcgcaggtgt ctgacgcttc tatgtgggcg tcagtggcaa cgctccacaa gtgttgaaag
     1021 actattgccc agcagctact actttaaggt accgcagttg gagtcggggc ccatcccgga
     1081 tgtcgcggca gc
//
LOCUS       DASQSL010001997         1499 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_53909, whole genome shotgun sequence.
ACCESSION   DASQSL010001997 DASQSL010000000
VERSION     DASQSL010001997.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1499)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1499)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1499
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53909"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            106..324
                     /locus_tag="VE844_20145"
     CDS             106..324
                     /locus_tag="VE844_20145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03571.1"
                     /translation="MDSLPPALLDFISIFRPLLRAEVFESFTYLLCGLLIGEAKHGTV
                     RASVFAPAAYQPQRCRIYSAAISSRGKR"
     gene            279..1370
                     /locus_tag="VE844_20150"
     CDS             279..1370
                     /locus_tag="VE844_20150"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03572.1"
                     /translation="MSDLFCRHKLSRQALMARLTEQVLTILYPSGLPARLFWLADSTL
                     TEKPFVRRVASVDLFHRAKRVIGRAKHLQGQCYVFAAHVYQTAHKHWASALVGALLYV
                     KGRSIPRLVGDLARQLRLPAEVRHVWVVDRGIVSRPLVQSLDRLGQYAVGRVRSNQVF
                     YFAPRRQPCRGRRRTYGQKCRVDKLVKRFPERLQHQTTTLRIRGKERTVRVYDAEMLG
                     RGVWPDRPCPVRLIVVVVPGLRLKPWYLLTTDLALAPVEAVQAYSGRQQIEVNFDEVK
                     ELGLGHYQGRSGEGVRRWPIFLCIVQTLLKLIATQALPLELPSLNWPWYKQENTVGQI
                     RRRLIAACCPRISRTKASDPTEEKLKKAA"
BASE COUNT          302 a          411 c          443 g          343 t
ORIGIN      
        1 ctgtacttcc cggtttttga ggcctaagta aggggcgcgg aggacttgcg ctccgcgcct
       61 tcgtcgttca tcgttgaaca gtcaatccaa cgagaggaac gactgatgga cagcttacca
      121 ccggcactgc ttgatttcat ttctattttc cgtccactgt tgcgagcgga ggtctttgag
      181 agtttcacct acttgctctg cggtctcctg attggcgaag ccaagcacgg cacggtgcgg
      241 gcaagcgtct ttgcgcccgc cgcttatcag ccccagcgtt gtcggatcta ttctgccgcc
      301 ataagctctc gcggcaagcg ctgatggctc ggttgaccga acaagtgttg actatactgt
      361 acccgagcgg cttgccggca cgcctatttt ggctggccga ttcgaccttg accgagaagc
      421 cgtttgtccg gcgggtggct tcggtggacc tattccatcg cgccaagcgt gtcatcggtc
      481 gggctaaaca cctgcaaggc cagtgttacg tcttcgcggc gcacgtgtat cagaccgctc
      541 acaagcactg ggccagtgcg ctggtcggcg ccttgctcta cgtcaagggg cggtccattc
      601 cgcggttggt cggtgattta gcccggcagt tgcgtttacc tgcggaggtg cgtcacgtct
      661 gggtggtcga tcgcggcatc gtcagtcgcc cgttagtgca gtccttagac cgcttaggcc
      721 agtatgccgt gggacgggtg cgctcaaacc aggtttttta cttcgccccg cgccgtcaac
      781 cctgtcgggg ccgccgccgg acttacgggc agaagtgccg cgtggacaaa ttggtgaagc
      841 gttttccgga gcggttgcag caccagacca ccaccctgag aatacggggg aaggagcgca
      901 ccgtgcgggt ttatgacgcc gagatgctag ggcgcggcgt gtggccagac cgcccttgcc
      961 ccgtgcgcct gatcgtcgtg gtcgtaccgg ggctgaggtt aaaaccgtgg tatctgctga
     1021 ccaccgactt agcactcgcc cccgtagagg cggtgcaggc ttatagtgga cgccaacaaa
     1081 tcgaagtcaa ctttgacgag gtcaaagagt tgggcttagg gcattatcaa gggcgcagtg
     1141 gcgaaggcgt acgccgctgg ccgatcttct tgtgcatcgt ccaaacgctt ttgaagttga
     1201 tagccaccca agcgttgccc ctcgagttgc cctcgctcaa ctggccgtgg tacaagcagg
     1261 aaaacaccgt cgggcaaatc cgacgacgct tgattgcggc atgctgccct cgtatttctc
     1321 gcactaaggc ttccgaccca actgaggaga aattgaaaaa agcagcgtaa ttctgaagac
     1381 ttctcaactc ataaaccggg aactacagta ttaaaagaat acaagaataa atttatggtt
     1441 tgtgagacat ggggaacaat tgaggatttg ttactgttat ataaaacggt tggatggaa
//
LOCUS       DASQSL010001998         1082 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_94535, whole genome shotgun sequence.
ACCESSION   DASQSL010001998 DASQSL010000000
VERSION     DASQSL010001998.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94535"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            139..621
                     /locus_tag="VE844_20155"
     CDS             139..621
                     /locus_tag="VE844_20155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006365186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4395 family protein"
                     /protein_id="HZC03573.1"
                     /translation="MMGAEQNKGIPLPIVNLNRWVLVLGVVGGLLLQQPLFTTMLFIV
                     VLSAVAFGRRGSLIFQVGKRLLAKRNAAAQRAGELEDPGLMRFNNTIAAVLLGGAQIA
                     FLFSQNVVGWALSLAVAVAAGVALAGFCIGCSLYFRYKMHRYRRSENAKQERTNGLET
                     "
     gene            664..999
                     /locus_tag="VE844_20160"
     CDS             664..999
                     /locus_tag="VE844_20160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011022242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2173 family protein"
                     /protein_id="HZC03574.1"
                     /translation="MATLDELLDIEGVVAAGEFNPDGSLVDYKATMDMSQEMAEMTAQ
                     FTATVTMMFNTLASSYTQVSGMQWVPQQGWAYSGGDWTVAVGGNRGVFIETEKADFNQ
                     LFEVLVGSR"
BASE COUNT          235 a          255 c          357 g          235 t
ORIGIN      
        1 aggggctctt ttgaggagac tatgggggca tagaggcaac ctcctcgggg tgttgggtac
       61 tatgtgtgag gcttgattaa gtgatgttag tatgaggtct aaatagggta gcaggaatga
      121 gaagaggagc ataagagaat gatgggcgcc gagcaaaaca agggcatccc gttaccgatc
      181 gtgaacctga atcgctgggt tttggtcctg ggggtggtag gggggctgct cctccaacag
      241 ccgctgttca ccactatgct ctttatcgta gtgctctccg ctgtagcgtt cggtcggcga
      301 ggcagtctga tttttcaggt tggcaagcgt ctcttggcta agcggaacgc tgccgcgcaa
      361 cgtgctggtg agttggaaga ccccgggttg atgcgcttca acaacaccat cgcggcggta
      421 ctgctcggcg gggcacaaat agcctttctt ttcagccaga acgtggtcgg ttgggcactc
      481 tctttagcag tggcggtggc ggccggcgtt gcgcttgcag gcttctgcat cggctgttcc
      541 ctttacttcc ggtacaagat gcaccgctac cgccgttcgg aaaacgcgaa gcaagaacgg
      601 acaaacggct tagagacata atgtgatcag cgctggggaa agcgggttta ggaaggagga
      661 gatatggcga ccctagacga gctgctagac attgagggcg tcgtagccgc tggcgagttc
      721 aatcctgatg gaagcctcgt ggactacaag gcgacgatgg acatgtccca agagatggcg
      781 gagatgacgg ctcaattcac cgccaccgtc accatgatgt ttaacaccct agctagctcg
      841 tacacgcagg tgagtgggat gcagtgggtg cctcagcagg gctgggcgta ctccggagga
      901 gattggacgg tggccgtcgg cggcaaccgg ggtgttttta tagaaacgga gaaggcagac
      961 ttcaatcagt tgtttgaggt cctggtcggc agcaggtagt aaggatcccg cgcctccgag
     1021 attggcgact gcaacgcccg agaatttgca gcacttctca aacaagccga ggtggacctg
     1081 gg
//
LOCUS       DASQSL010001999         1046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_201717, whole genome shotgun sequence.
ACCESSION   DASQSL010001999 DASQSL010000000
VERSION     DASQSL010001999.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201717"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..577)
                     /locus_tag="VE844_20165"
     CDS             complement(<1..577)
                     /locus_tag="VE844_20165"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HZC03575.1"
                     /translation="MGSISDHRLAEKTLRDSEPFARSVLDSLSANIAVLDESGTIVFV
                     NRAWREFARSNEAVGNVAENANYLQVCESAVELGSEDAASFAEGIRSVLSGRRDEFAL
                     EYPCHSPTEQRWFVGQVTRFPSGSPAWAVVAHENVTERKQAEKALRLRDRAIAASSNG
                     IVITDPGQPDNPIMYVNPAFERISGYSVQEVL"
BASE COUNT          241 a          276 c          300 g          229 t
ORIGIN      
        1 caagcacttc ttggacagag tatccgctta tgcgctcaaa ggcggggttg acgtacatga
       61 tggggttgtc aggctggccg gggtcggtga taacgatgcc gttggagctg gcggcgatgg
      121 ccctatccct gaggcgcagc gccttctcgg cctgtttgcg ctcggtgacg ttctcgtgag
      181 caacaacagc ccacgcggga ctaccggaag ggaagcgggt cacctgtcca acgaaccagc
      241 gctgctccgt aggagaatgg caaggatact cgagcgcaaa ctcgtctcgt cggccagaga
      301 gtaccgaacg gattccctca gcgaaagagg cagcatcttc ggagccgagc tctactgctg
      361 attcacagac ttggaggtaa ttggcgttct ccgcaacgtt tccaacagcc tcattggatc
      421 tggcaaactc ccgccaggct ctgttgacga aaacgatggt gcccgactcg tcgaggacgg
      481 ctatgttcgc agagaggctg tctaggacgg agcgagcaaa gggttcggaa tcgcgcaacg
      541 tcttctcggc aagccgatga tcggatatac ttcccatacc agtaccttta gcacctgtct
      601 gattgtaaac gcgttttcat gtgcgtagca tataacctcc ttctgaacct gaccactttt
      661 agttgtttcg ccgttatcag ttctgttttc ggagcaactt ggccttaggg gcaagcgcag
      721 ctcctgctgg acaggatgct cagagtcacg gcggcactct gccgaatccc cgcgaagtat
      781 tacgaaagct ttatagagcc gttacccgcc gttgacatgt ggttatcaga atatccatac
      841 aagaagccaa tgtttaaccg aggtaggcaa cgaacatgcg cttttcagca tgaagcgaag
      901 aagaaccggg ggagggctcg tgtggaacgc agcgacctat tagctgggac cgagaatcgg
      961 tacgcaggtt atacggtatg cgacgccacg ggtgaaaaga tcgggaacgt tgatgctctc
     1021 ttcgttaacg ataaccgtac ccccaa
//
LOCUS       DASQSL010002000         1683 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_94540, whole genome shotgun sequence.
ACCESSION   DASQSL010002000 DASQSL010000000
VERSION     DASQSL010002000.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1683
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94540"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..622)
                     /locus_tag="VE844_20170"
     CDS             complement(<1..622)
                     /locus_tag="VE844_20170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013220663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 family protein"
                     /protein_id="HZC03576.1"
                     /translation="MKKPWVALVSVLLALSFALVWRGPLAATPALSWDGFVNHFIEAY
                     FVAYPSFAVNAGRHGFDGKLPDWSPAALSKEAERLRSARKQALDLDPASLDERERLEH
                     DYLVSVIDRDLFWLEAAQWPYKNPMFYSRALDPNVYVTREYAPLKERLRAYIAYVKTV
                     PAAVEHIRNNLRTPLPRTYIELGKIVFGGLASYYEKDVPAVFAGVED"
     gene            complement(647..1249)
                     /locus_tag="VE844_20175"
     CDS             complement(647..1249)
                     /locus_tag="VE844_20175"
                     /inference="COORDINATES: protein motif:HMM:NF025948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HZC03577.1"
                     /translation="MHEILTDIFMWSWFSEPHGYNFNGFFIRHPAGNLCIDPADPGEE
                     VLNELARQGVARILLTNRNHVRAANRVRLTTKAPTAIHPADAAYARAQGAELDDELQV
                     GEEVGPLVSVGVPGKSPGELAFYWPERKILLVGDAVIGNPPGSLGLLRESVMDDSPRL
                     RESVRKLLDLDFNALLVGDGQPVLQGARARLVDLVHTFPE"
BASE COUNT          393 a          460 c          487 g          343 t
ORIGIN      
        1 catcctcgac acccgcgaat accgctggaa cgtccttctc gtaatatgaa gccaggccgc
       61 caaacacgat cttgcccagc tcgatatagg tgcgcggcag gggcgtccgg agattgttcc
      121 ggatgtgctc aaccgccgca ggcacggtct tgacataggc gatataggca cgcaggcgct
      181 ctttgagagg cgcatattcg cgggttacat acacgttggg atcgagcgct ctggaataga
      241 acatcgggtt cttgtaaggc cactgcgcag cttccagcca gaagaggtcc ctgtcaatga
      301 cgctcaccag ataatcgtgc tcaaggcgct cacgctcgtc caaggaagcg ggatctaaat
      361 ccagcgcctg cttgcgtgct gaacggagcc gctcggcctc cttgctgaga gccgcaggac
      421 tccagtcggg aagcttccca tcgaacccat ggcggccggc attgacggca aagcttggat
      481 aggcgacgaa atacgcctct ataaaatggt tcacgaaccc atcccagctt agcgcagggg
      541 tggctgccag cggtccccgc cagaccaaag cgaagctaag cgccagcagg acagaaacaa
      601 gggctaccca aggctttttc atcttttccc ctcggtgggt tgtcgatcac tctggaaagg
      661 tatgtaccag atccacgagc ctcgccctgg caccctggag cacgggctgt ccgtcgccca
      721 ccaggagcgc attgaagtcg agatcgagca gtttccgcac gctttcccga aggcgcggag
      781 aatcgtccat cacgctttcg cgcaacagcc ccaggctgcc tggaggattg ccgatgactg
      841 catccccgac gaggaggatc ttccgctccg gccagtaaaa ggccagctcg ccgggcgatt
      901 tccccggaac accgacgctc accagcggcc ccacctcctc tcccacctgc agctcatcgt
      961 cgagctccgc tccctgggcg cgggcgtagg cggcatctgc cgggtggatc gccgttggag
     1021 ctttggtagt caggcgcacc cgattggccg cgcgtacatg attgcgattg gtgagcagaa
     1081 tgcgcgccac accctggcgg gcgagctcat tcaggacctc ttcaccggga tcggcagggt
     1141 caatgcagag attgcctgcg gggtggcgga tgaagaaacc gttgaaattg taaccgtggg
     1201 gctcagaaaa ccaggaccac atgaagatat cggtaaggat ctcgtgcata ctatgctcct
     1261 agacaataaa gttttcctac tcctcatcca gtatgcctat catgagcttg ggttcaagtg
     1321 aaccttcgat agggatatgc aagctcggcc ttcgaaatgt cgcgtataaa ggtattcata
     1381 ctaatctcct aacccgctat cctactagag tagatataag cttggcataa aatcagaaag
     1441 gaggatatag gggcaatttc gccgaagcgg gtaaggtagg cgatttgaaa gaaagggaaa
     1501 tgaagcgtat ccaggcggaa ggtaaggtaa agctcgaaga cgagaagatc cttgtagaaa
     1561 cttgaaaact gctaagaggt gagcgcctgg ggatcaaaat gtgatagttg atggcagcga
     1621 gctgagcgtg atcgattggc tggtagcagg atatgtgatc cttttttgtc ttttgtggtg
     1681 tgg
//
LOCUS       DASQSL010002001         1002 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_173981, whole genome shotgun sequence.
ACCESSION   DASQSL010002001 DASQSL010000000
VERSION     DASQSL010002001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173981"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..255
                     /locus_tag="VE844_20180"
     CDS             <1..255
                     /locus_tag="VE844_20180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03578.1"
                     /translation="CNRCVLTLASPASNACTLLKSNACSTSALLWYVEARYTAVYLRT
                     VYTDVNRFLCQTPLAVAVLGYCQIKRVAYPVSAQYGILTA"
     gene            252..920
                     /locus_tag="VE844_20185"
     CDS             252..920
                     /locus_tag="VE844_20185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007674967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
                     /protein_id="HZC03579.1"
                     /translation="MNPRPATNPYKRHRFPAEIISHSVWLYYRFSLSYRDVEELMAER
                     GVTLSHEAVRYWCRKFGQAYANALRHRHPRPGEKWHLDEVCLTIYQERHYLWRAVDQD
                     GHVLDILVQGRRDKHAAKTFFRKLLKGCQYVPRVIITDKLRSYGAAKREILPGVEHRQ
                     HRYLNNRAENSHQPTRQRERAMRRFKSAGHAQRFLSAHGPILSHFRPRRPALAKTSFT
                     SMRN"
BASE COUNT          217 a          301 c          269 g          215 t
ORIGIN      
        1 tgcaacaggt gcgttctcac cttggcttcc ccggcatcga acgcctgcac actgctaaag
       61 tcgaacgcct gttccacgtc agccctcctc tggtatgtcg aagcaagata taccgcggtg
      121 tatctgcgaa ccgtctatac ggatgtgaac cgttttctgt gccaaacacc tctcgctgtg
      181 gcggtattag ggtactgtca aattaagcgg gtagcctatc ccgtttcggc gcagtatggc
      241 atactcaccg catgaatcca cgaccggcca ccaatccata caagcgtcat cgattcccgg
      301 cagagatcat cagccacagc gtgtggctgt actaccgctt ttccctcagc tatcgcgatg
      361 ttgaggagtt gatggcggaa cgtggcgtta ccctgtcgca cgaagctgtg cggtattggt
      421 gccgcaagtt tggccaggcc tatgcgaatg cgttgcgtca cagacatccc agacctggcg
      481 agaagtggca tcttgatgaa gtctgcttga ccatctatca agagcgtcat tacctgtggc
      541 gggcggtgga tcaagacggt cacgtgctgg atatcttggt ccaaggtcgg cgggacaaac
      601 acgcagccaa gacattcttc cgtaagctgc tcaagggctg ccagtatgtg cctcgggtga
      661 tcatcacgga caagctcaga agctatggtg cggccaagcg ggaaatattg cccggcgtgg
      721 agcatcggca gcaccggtat ctcaataacc gggcggaaaa ctcccaccaa ccgacccgcc
      781 aacgcgagcg ggccatgagg cgcttcaagt cggcaggcca cgcgcaacgc ttcctctcag
      841 cccatgggcc catcttgtca cactttcgtc cccgacgtcc agccctcgcc aagacatcct
      901 ttacctctat gcggaattaa ctcgaccgta tttgggaaat ctctgcttga ccagccgcca
      961 gagccggatg gcgcctcgtc aagagccctt catgcgtgag aa
//
LOCUS       DASQSL010002002         2060 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_164169, whole genome shotgun sequence.
ACCESSION   DASQSL010002002 DASQSL010000000
VERSION     DASQSL010002002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2060
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164169"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            137..562
                     /locus_tag="VE844_20190"
     CDS             137..562
                     /locus_tag="VE844_20190"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008384738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HZC03580.1"
                     /translation="MAACKSQHLELIEEACAIIARRFKQDKYHLGAALRTRSGRLFTG
                     VHLEAHVGRIAVCAEAIAIGVAATAGDTEIEAIVAVDRKGRVVSPCGMCRELISDHSP
                     DCEVIIPGDNGPEVACIGDLLPRKYRKHTHSAPADPPAR"
     gene            632..1186
                     /locus_tag="VE844_20195"
     CDS             632..1186
                     /locus_tag="VE844_20195"
                     /EC_number="3.1.1.106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013048972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetyl-ADP-ribose deacetylase"
                     /protein_id="HZC03581.1"
                     /translation="MAVTETTRRIEVIKADITRLKVDAIVNAANTSLLGGGGVDGAIH
                     RAAGPGLLEECKTLGGCATGDAKITQGYRLSARFVIHTVGPVWRGGHEGEPALLASCY
                     RTTFKLALEHGIETIAFPAISCGVYGYPIQQACSIALRETLAFLEQAPSIRKVYFACF
                     GEDIYQAYIELLAVSGKQHEGFQS"
     gene            1361..>2060
                     /locus_tag="VE844_20200"
     CDS             1361..>2060
                     /locus_tag="VE844_20200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004339852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HZC03582.1"
                     /translation="MILVPVILAGGGGTRLWPLSREHYPKQFLSLAGKGSLLQRALLR
                     LDGLTERNYHAEPAFMVQDPLVICNEEHRFLVAEQARQVDKPIRRAVLEPAGRNTAPA
                     LTCAALLSVEDGEDPILLMMPADHIIQEVTELHGAIVGGFRLADQGYLITFGIVPNRP
                     ETGYGYIKRGLMIDGGASPGLAVHRIEAFVEKPDLATAVSYIDSGHYAWNSGIFMMKA
                     SVWLRAIRTYRPDIL"
BASE COUNT          448 a          551 c          586 g          475 t
ORIGIN      
        1 ctaaaatact tttaatccgt tggtcgtagg aaacgactcc tacacggccc accatttcac
       61 aggcaggata tacttgaatc tcctctactg cccggttcct gttaggtgga ggcattatta
      121 ttctttaaac tacgttatgg cggcgtgcaa atcccagcat cttgagctta tcgaggaagc
      181 ctgtgcgatt attgcgcgtc ggttcaagca ggataagtat cacctcggcg ccgccctgcg
      241 cacgcgatcg ggccgattgt ttaccggcgt ccatctggaa gcccatgtag gcaggatcgc
      301 tgtctgtgcc gaggcaatcg cgatcggagt ggcggcgacg gccggcgata ccgagattga
      361 ggcaatcgtc gctgtggatc gcaaaggccg agtggtctcc ccctgtggga tgtgccgcga
      421 gttgatctcg gatcattcac ccgactgcga ggtgatcatt ccaggcgaca acgggccgga
      481 agtcgcctgt ataggcgatt tactgccccg caagtaccgg aaacatacgc attccgcacc
      541 cgccgatcca ccggcgcgct agagcctgtc taaaaagcgt cgtgagcggg tattagacag
      601 gttcttggat acgattaaac tccaaaagga ggtggctgtg acagagacta cccggcgcat
      661 tgaggtcatc aaggcagaca tcacccggct caaggttgat gctattgtga atgcggccaa
      721 tacctccttg cttggaggcg gtggcgtaga tggcgctatc caccgggcgg caggcccagg
      781 gctcctggag gaatgcaaaa ccttaggcgg ttgtgccacc ggtgatgcca agatcacgca
      841 gggctataga ctctcggccc gattcgttat ccacaccgta ggtccggtgt ggcgaggagg
      901 ccacgagggt gagccggcat tgctcgcctc ctgttatcgg acaactttca agctcgcact
      961 ggagcatggg attgaaacta tcgctttccc ggccatcagc tgcggtgtct atggttatcc
     1021 tatccagcaa gcttgctcta tcgccttgcg ggagaccctc gcgtttctgg agcaggcgcc
     1081 atcgatccgc aaggtctact ttgcctgctt tggagaagat atctatcagg cctatatcga
     1141 gctattggcc gtatccggca agcagcacga gggcttccag agctaatact tctcagaccg
     1201 tcaagcgttc ggataagctc acgcgtgagc ttgggtataa agcttgctat atgctcagcg
     1261 aagccctgcc agagaggcga gcgcgctatc ggcagcgggc cgatacacaa gcaatcgggc
     1321 acataacagc atttctttta ttcgcaggag gggtttatcc atgatcttgg ttccagtcat
     1381 tcttgcaggc ggtggaggta cccgcttgtg gccattatcg cgcgagcatt atcccaaaca
     1441 attcctaagc cttgccggca aaggatccct cttgcaaagg gctttgctac gcctggatgg
     1501 cttaactgaa cgcaattatc acgccgagcc ggcattcatg gttcaggatc ctttagtgat
     1561 ctgtaacgag gagcaccgtt ttttggtagc agaacaagcc cgtcaagtcg ataaaccgat
     1621 ccggcgtgcg gtgcttgagc ctgccgggcg aaatacagca cctgctttga cctgcgctgc
     1681 gcttttaagc gtggaggacg gagaagaccc gatactgctc atgatgcctg cggatcatat
     1741 catccaagag gttacggaac ttcatggtgc cattgtaggg ggatttaggc ttgcggatca
     1801 gggctattta attacctttg gcatcgtccc caatcggccg gaaacaggat acggttatat
     1861 aaaaaggggg ctcatgattg atggcggcgc gagccccggc cttgccgtcc atcgcatcga
     1921 ggccttcgta gaaaaacccg atctggccac ggcggttagc tatatcgatt cgggccacta
     1981 tgcctggaat agcggtatct tcatgatgaa ggcctcggtt tggcttaggg ccatcagaac
     2041 ctatcggccc gatatcctgg
//
LOCUS       DASQSL010002003         1706 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_94566, whole genome shotgun sequence.
ACCESSION   DASQSL010002003 DASQSL010000000
VERSION     DASQSL010002003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94566"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..642)
                     /locus_tag="VE844_20205"
     CDS             complement(<1..642)
                     /locus_tag="VE844_20205"
                     /inference="COORDINATES: protein motif:HMM:NF014766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HZC03583.1"
                     /translation="MNNPLNIKRLDVHTLDVSLKAPFTTSSAKLEVIHNLAIQITLAD
                     GSIGWGEIPTLPPITLEDQSIALVALQSEAGLLTGRNAGEWRRIAVELSERIPHLASV
                     RAGIEMAMIDALARSWHAPLFRFFGGYHDSVVTDITIPICPGEEAQPLAEQYRKWGFD
                     TIKAKIGLDASEDVERLRAIRRGHPTCRLILDANAGYLVEQTLDVLRHLRQAGV"
     gene            708..1496
                     /locus_tag="VE844_20210"
     CDS             708..1496
                     /locus_tag="VE844_20210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03584.1"
                     /translation="MDTTTTFVNQIVLLGASNLTRALATTVEAAQRICGRPSRILVAA
                     GHGRSYGVYSQVLFRGLPGIINCGLWDDLAKGPALPTFALLTDLGNDIAFEVSVEKII
                     NWVDWCVARLAEHRARMIVTTLPVQGLEGLSPWGYRFFRAVLFPGRRLSLQQVLDRAR
                     AINIALHQHALERAFTVVEQRPEWYGVDPIHIRRRFFAPAYDDILRHWVDGYPNGQRV
                     SRTSLRRWVQLRLLAPQYQRVFGSDRYREQPAVVLPDGSTVALY"
     gene            complement(1509..>1706)
                     /locus_tag="VE844_20215"
     CDS             complement(1509..>1706)
                     /locus_tag="VE844_20215"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase domain-containing protein"
                     /protein_id="HZC03585.1"
                     /translation="QLRTGGDMGFEEISQVVPWIELAYDQGQDLEAEQVAHPRCFKTH
                     CWYDHCPKGAKYIVVVRNPND"
BASE COUNT          362 a          474 c          479 g          391 t
ORIGIN      
        1 tactcccgct tgccgaaggt gcctcaggac atccaaggtt tgctccacca agtagcctgc
       61 attggcatcg agtatcaatc ggcaggtagg gtgaccgcga cggatggcac gcaagcgctc
      121 cacgtcttct gaggcatcga ggccgatctt cgccttaatc gtatcaaaac cccattttct
      181 gtactgttcg gccagtggtt gggcttcctc gcctggacag atcggtatgg tgatgtcggt
      241 gacaacgctg tcgtggtaac caccgaaaaa acgaaacaaa ggcgcatgcc agctccgggc
      301 caaggcatcg atcatggcca tctcgatacc ggcccgcacg gaggcaagat gcggtatacg
      361 ctcactcaat tcaaccgcga tgcggcgcca ctctccggca tttcttccag tgaggagtcc
      421 ggcttcgctt tgaagtgcta ccagggcgat cgactgatcc tcaagggtga tggggggcaa
      481 agtggggatc tctccccagc cgatggaacc gtctgccagt gtgatttgga tcgcaaggtt
      541 atggataacc tcaagcttag cggatgaggt ggtgaacggt gccttcaatg acacatccag
      601 cgtgtgaaca tcgaggcgct tgatgttgag agggttattc atatttgtct atgaaacggg
      661 taactatggc ttgggacaag tgccacggtc attgtctaac cgttacaatg gataccacca
      721 caacgtttgt caaccagatc gtattgcttg gcgccagcaa tctaacacgc gcactcgcaa
      781 ccacggtgga agccgcccag cgcatttgcg gcaggccgag caggatccta gtcgccgccg
      841 gtcatggtcg atcctatggt gtgtatagtc aggtcttatt ccgcggctta ccggggatca
      901 ttaactgcgg cctctgggat gaccttgcca aagggccggc gctgcccacc ttcgcccttc
      961 tcaccgatct tgggaatgat atcgccttcg aggtttcggt cgagaagatc atcaactggg
     1021 tggactggtg cgtcgcgcgc ctggccgaac acagggcgcg aatgatcgtc acaacgctac
     1081 cggtgcaggg tctcgaaggt ctatcgccct ggggatacag attctttcgc gcggtgttgt
     1141 ttccaggacg gcgcctcagc ttgcagcaag tacttgatcg ggcgcgcgca atcaacatcg
     1201 cattgcatca acacgcgctt gagcgagcgt ttacagtggt cgaacaacgc ccggaatggt
     1261 atggcgttga ccctatccat attcgccggc gtttcttcgc accagcctat gatgacattc
     1321 tcaggcactg ggttgatggc taccctaatg ggcagcgggt cagcaggacc tccctgcgac
     1381 gttgggtgca attacggctc ctcgcgccgc aataccagcg cgtattcgga tccgatcggt
     1441 atcgagagca gccagcagtt gtcctcccgg acggctcgac ggtcgcgctt tactaaagat
     1501 tgagcagatt aatcgtttgg attgcgcacc actactatgt actttgcccc tttaggacag
     1561 tggtcatacc agcagtgtgt cttgaagcaa cggggatgag caacttgctc ggcttcgagg
     1621 tcctgtcctt gatcatatgc cagctcaatc caggggacaa cttgggagat ttcctcaaat
     1681 cccatatcac cacctgtacg tagctg
//
LOCUS       DASQSL010002004         1506 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_119769, whole genome shotgun sequence.
ACCESSION   DASQSL010002004 DASQSL010000000
VERSION     DASQSL010002004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119769"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1226)
                     /locus_tag="VE844_20220"
     CDS             complement(<1..1226)
                     /locus_tag="VE844_20220"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03586.1"
                     /translation="MVIGQPRPFVHAFVDAVNTAITAHHPGYGLSALQRSWLAFCLTA
                     LLVTNAVCWARFERASLGTYSLAALSWMFRHAKIPWELLLVASVRVLLRHYGITHGSL
                     VVDDSDKQRAKSAKKIAYLHHLRDKESGGCILGQSLVFLLLVTPKITIPMGFAFYMPA
                     PELTAWYKQERTLKQQGIPRKRRPPKPPSNPQYPTKQELALRLLEQCKTHHPALHVHC
                     IIADALYGSAAFMDGASALFGGVQVSSQLRSNQRVRVYKREQHVADYFATHPGTPQRI
                     RIRGGDEMAAIVGSARLYVCAHHTKRFVIALKYDGEDTYRYVMASDLSWRTLDIVHAH
                     TLRWLVEVFVQDWKAYEGWDTLAKQPGEEGSRRSVILSLLVDHCLFLHPAQHAQLTHN
                     LPAYTGDEDETCKILA"
BASE COUNT          322 a          421 c          453 g          310 t
ORIGIN      
        1 tgtgctagga ttttacacgt ttcgtcctcg tcccccgtat acgcaggcag gttgtgtgtg
       61 agctgggcgt gttgggccgg atgcaagaag aggcaatgat caaccagtag gctcagaatc
      121 acgctgcggc gtgatccctc ctcgccgggc tgcttggcca gtgtatccca accttcatag
      181 gccttccagt cctgcacaaa cacctcaacg agccatctca aggtgtgggc atgtacgata
      241 tcgagcgtgc gccagctgag atcggacgcc atcacatagc gataggtgtc ttcgccgtcg
      301 tatttcagag ctatgacgaa ccgtttggtg tgatgggcac acacgtacag tcgagcactg
      361 cccacgatgg ccgccatctc gtccccaccg cggatgcgga tccgctgtgg cgtaccggga
      421 tgggtggcaa aatagtcggc cacgtgctgc tcgcgcttgt acacccggac tctctgatta
      481 ctacgcaact ggctgctgac ctgtacccca ccgaagaggg ccgatgcccc atccataaag
      541 gcagcgctcc catagagggc atcagcaatg atgcagtgca cgtggagggc cggatggtgc
      601 gttttgcatt gttccagcag gcgtagggcc agctcttgtt tcgtcggata ttggggattc
      661 gagggcggtt tgggcggacg acgcttccgg ggaatcccct gctgtttcag ggttcgctct
      721 tgtttatacc aggccgtcag ctctggagcc ggcatgtaga aggcaaaccc catagggatg
      781 gtgatcttag gcgtgaccaa cagcagaaag accagacttt ggcccaggat gcagccaccg
      841 ctctctttgt cccgcaggtg gtggaggtag gcgatcttct tggccgattt cgcccgttgc
      901 ttatcgctat cgtccaccac gagactgccg tgtgtgatgc catagtggcg cagcagcacg
      961 cgtacactcg cgaccaggag caactcccag ggaattttgg cgtggcgaaa catccatgac
     1021 aaggccgcca gtgaataggt gcccaggctg gcccgctcga aacgagccca gcacacagca
     1081 ttggtcacga ggagcgcggt cagacaaaac gccagccagg aacgctgaag ggctgacaag
     1141 ccgtagccag ggtggtgagc ggtaatagct gtgttgacgg cgtcgacaaa ggcatgcaca
     1201 aaaggtcgtg gttgcccgat caccataagt gcccccatca tgtcagttcg tcagtgacat
     1261 gatggagcat aacacctgtg tttcaactgc cgtgaatgtg gaaataccgt acaatgaggg
     1321 aggtagctgg ccgagcggtc caacgaagat ggagggtgca aaggcgctcg ccggagttcg
     1381 gccggtcgac gcagctacca ctcccctgag ccgcccgtca agagcaaaaa acttgagcat
     1441 cgagttttaa tatcggcggc atcatttcta gaacctcgcg accggcgtcg gtttcctgca
     1501 gttcag
//
LOCUS       DASQSL010002005         1124 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_119771, whole genome shotgun sequence.
ACCESSION   DASQSL010002005 DASQSL010000000
VERSION     DASQSL010002005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1124
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119771"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1112
                     /locus_tag="VE844_20225"
     CDS             <1..1112
                     /locus_tag="VE844_20225"
                     /inference="COORDINATES: protein motif:HMM:NF025598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4340 domain-containing protein"
                     /protein_id="HZC03587.1"
                     /translation="TRDQDTVLVKQGEQWVIENRSRYPALFEKVKGAVLAIADLEILE
                     GKTKKKELYPRLGVEDIETQGASSRQVVLLDQGGQPLAALIVGKKRTATSGRGIPAFY
                     VRKADEPQAFLVKGALEDLPEKPIDWTDQSLLNIDAKRIRAITIEPPGQGPLQIHRKD
                     AGTQDFTLDNILKGTKLKSQTALNGLASTLEFLQFEDVVARASFTPPPNPTVTTLRTF
                     DGLIAKVTTANLNDKAHASFEFAYDAQAAAQAKETPATEETKPSADAAAKPAVSNQPA
                     KAETPKTETKPSVEEEAVKLNEKTRDWVYILPGYKATLLTKTLSDLTAPEPTAEEAKE
                     EETKANEGGHPKLPAEPSSAPPAPEPPVENPPSGP"
BASE COUNT          286 a          340 c          314 g          184 t
ORIGIN      
        1 agaccaggga tcaagatacc gtgctggtca aacagggaga gcagtgggtg attgaaaacc
       61 ggagccgtta tcccgccttg tttgagaagg tcaaaggcgc agtcctcgcg atcgcggatc
      121 tcgaaatcct ggaaggcaag actaaaaaga aggagttgta tccgcggctc ggggtagaag
      181 atatagagac gcaaggcgcc tcatcgcggc aggtagtgct cctcgatcag ggaggacagc
      241 ccttggccgc tctgatcgtg ggtaaaaaac gcaccgccac ctcgggccgg ggcatccctg
      301 cgttctatgt gcgcaaggcg gacgagccgc aggcgttcct ggtcaaggga gcactcgagg
      361 acctccccga gaaaccgata gactggaccg atcagtcgct actcaatatc gatgccaagc
      421 ggatccgtgc gatcaccatc gagcctccgg gacagggtcc gctgcagatc catcgtaagg
      481 acgccggcac ccaggatttt accctggata atatccttaa aggtacgaag ctcaaatccc
      541 agacggcgct caacggtctg gcctcaaccc tggaattcct gcagtttgag gatgttgtcg
      601 cgcgggcgag tttcaccccc ccgccaaacc cgactgtcac tacgctgcgc acctttgatg
      661 ggttgattgc caaggtgacc accgccaacc tcaatgacaa ggcccatgcg agctttgagt
      721 tcgcttatga tgcccaggca gccgcccaag ccaaagaaac cccggccact gaggagacaa
      781 agccgagcgc ggatgccgcg gccaagcctg cagtatccaa tcagcccgct aaggctgaga
      841 ccccaaagac tgagacgaag ccctcggtag aggaagaggc ggtcaagctc aatgaaaaga
      901 cccgtgactg ggtttatatc ttgccgggct ataaggccac gctcctgacc aagaccttaa
      961 gcgatctgac agcaccagag cccacagcag aggaagcgaa ggaggaagaa actaaggcaa
     1021 acgagggtgg tcatcccaaa ctccccgcgg aaccctcctc cgcaccgcca gctccagaac
     1081 ccccagtaga aaacccaccg tccggtcctt aagatccctc acct
//
LOCUS       DASQSL010002006         1033 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_174012, whole genome shotgun sequence.
ACCESSION   DASQSL010002006 DASQSL010000000
VERSION     DASQSL010002006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174012"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..247
                     /locus_tag="VE844_20230"
     CDS             <1..247
                     /locus_tag="VE844_20230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018583132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DALR anticodon-binding domain-containing
                     protein"
                     /protein_id="HZC03588.1"
                     /translation="LVLALLDFSGVILEIEQSMQFHRLAAYLFSLATTFTGFYEQCPV
                     LKAQGQVRDTRLALCDLTARILACGLDLLGIEAPEQL"
BASE COUNT          208 a          327 c          293 g          205 t
ORIGIN      
        1 cctggtgctt gcgctgctcg atttttccgg cgtgatactc gagatcgagc agagcatgca
       61 gtttcatcgt ctcgccgcat acctattcag tcttgctaca acgttcaccg gtttctacga
      121 acaatgccca gtcctgaaag cccaaggtca ggtacgcgac actcgcttgg cgctctgtga
      181 tctcacggcg cgcattctcg cttgcggcct tgacctgctc ggcatcgaag cgcccgaaca
      241 actatagccg ggcagctgcg agcccactac ccaggcatgg cgcacccgcc acacacagtt
      301 tcgggagatg atcgaacagg tgctgctgcc tcaactcgat acgcagctac aggcggcggt
      361 atcctagcaa tgcgaacggt ttcttgccga tccgctcgat ttcacgccat gtttcgtcca
      421 ctgcgatctc attcggaaca catcctggtc gattcccaga cacgacgact ggcgggattg
      481 atcggcatcg attgggtacg gtcggggatc cggcgatcga cttcgtgggg atgttgacca
      541 cgctcgggcc gggccgcgac ccgggaagcc gtggtccgac gaagcgaatg tctcctggga
      601 gcggttgctg ttctattggt ggaggagcac cgttcacccc gtcccagctg cgcaaacgac
      661 ggtaaaggtc acaaacacca ccggtagtcc acagccctac atagtgaccg tcaaacgtca
      721 acgactccag cggcactcgc gtcgctcaga ctctcgcagt cattgattcg ctagctgccc
      781 gacagtcagc aaccagcccc acttcgggcg gagctacggc gcaggacgcc aatcctggaa
      841 aggctacatg cgctgtagct gccgtccacc gctccgcgag ctagcagatc cccggaagat
      901 ccatggagta actcctgagc cgcccgcagc gatgagctat tgaggggcac tccagggggg
      961 acggccacca atgtatgacc gagcgatgaa cgtgctctcc acggtggtca cggtggtcat
     1021 ctataccgtg gtg
//
LOCUS       DASQSL010002007         1472 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_119787, whole genome shotgun sequence.
ACCESSION   DASQSL010002007 DASQSL010000000
VERSION     DASQSL010002007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1472
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119787"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            419..1102
                     /locus_tag="VE844_20235"
     CDS             419..1102
                     /locus_tag="VE844_20235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011306529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HZC03589.1"
                     /translation="MQTREVKIPLREAVLEGELSIPAGAEGLVLFVHGSGSSRHSPRN
                     QLVAQALREAGIGTLLFDLLTREEEAVDRVTGHLRFDIRLLADRLIGATAWLWQAPGT
                     RSFNIGYFGASTGGGAALVAAAELGDRVSAVVSRGGRPDLAGEALPYVRAPTLLIVGG
                     YDEPVIEMNRAAYAELRCPKELKIVPGATHLFEEPGTLEEVARLAQEWFQRYLQSPPS
                     RDHAEVEGG"
BASE COUNT          310 a          404 c          447 g          311 t
ORIGIN      
        1 ggcgccggcc tcggtcagga tcgaacagat acatcgcgac agcacccact gccgcccccg
       61 ctaagggtag aagtcctgca atcatcatct cctcctctgg gctatcctct caatggtgga
      121 gctctcatct tgttagaaaa agcccggcaa ggtatgttcc ggtcatcagc cagctttcgg
      181 ccgatatgtg cggcaataga gggctcggct gcttgtaact tttacaatat agcttgtaac
      241 ctttacgaca gaggagcgcg gcaatacgtt tgagactcgc accgatcgct tgctgaatca
      301 ccccagcagg gcattgctca ttgcaggaaa ggcgagccgt gcatttcata cccacgagcc
      361 tttggaatgc tgcttgctaa aataggtatg agtagtaaac ggcggctaat cagagcagat
      421 gcagacaaga gaagtgaaga tccctctcag ggaggcagtg ctcgaaggag agttgagcat
      481 tcctgccggt gcggaggggc ttgtgttgtt cgtccacggg agcggtagta gtcgtcacag
      541 cccgcgcaat caattggtgg ctcaagcctt acgcgaggcg ggcatcggca ccctgctgtt
      601 tgacctgctg acgcgagagg aagaggcggt cgaccgggtg acggggcact tgcgctttga
      661 cattcggcta ctggccgatc gcctgatcgg ggccacggcg tggctttggc aagcgcccgg
      721 gacacgatct tttaatatcg gatattttgg tgcgagcaca ggtggtggag cggcccttgt
      781 cgccgccgcc gagcttgggg atcgggtgag cgctgtggtc tcccgaggcg ggcggcctga
      841 cctcgctggc gaggcattgc cctacgtgcg ggcccccacg ctcttgatcg taggcggcta
      901 tgacgaaccg gtcattgaaa tgaacagagc cgcgtatgcg gagcttcgtt gcccgaaaga
      961 gctcaagatc gtgcccgggg ccactcatct tttcgaggaa cccggcacac tggaggaggt
     1021 cgcgcggctc gctcaagagt ggtttcagcg ctatctgcaa tcgccgccca gccgggacca
     1081 tgctgaggtg gagggcggct gaggcatgga tgagatacgg ctgatgatac ggttcaaaaa
     1141 actcatggcc cgaccgcccg ctcaaagggc tctcgcccca ggacattgat cagcaccagg
     1201 tcttcgtgtc ggttcagctc tatcagtcct gggtatatgg cgtataatca aagcgttagc
     1261 taagctgctc tgccatgata cggcttctgt ttttggaata tttacagggc agatgtaaaa
     1321 gttacacttt agctagcctt cgtggtctta gctaactctc gcggcggtag ctcctccgga
     1381 tagaaacgcc cgcgcgcagt acgccaacgc caaatatcga gcaacaccag ggtcatcgcg
     1441 agtaccaacg gtccgaggac cagccctgag gc
//
LOCUS       DASQSL010002008         1298 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_108916, whole genome shotgun sequence.
ACCESSION   DASQSL010002008 DASQSL010000000
VERSION     DASQSL010002008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1298
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108916"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            275..1162
                     /locus_tag="VE844_20240"
     CDS             275..1162
                     /locus_tag="VE844_20240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03590.1"
                     /translation="MSWIVPVLLRITAAYIVVPLLVKPLVDMYPQRTLILLQFAGCFV
                     LALLVALALQQLHIDWRIVAVGFGNGLAAYCHYKAIAISLSRTALFAFWDDLLAMGLS
                     YVLLREGQFLNARILLGIGLSVGAVIGFTVHSAHPQPLGEQASTRTPLRLYLYAGAYS
                     LLLGGSVFFMRYLGVHGTGLGTFLVNWCSGILGAALLLVLTSPEAATAITTLSKRPLV
                     RLGNLSLVTLVALSAAFMAYRLAPQTVVQPLFLVGEMVAPAILGLYVFAERNTLDRWE
                     YLYFGLGLAGGLMVALSFA"
BASE COUNT          226 a          366 c          366 g          340 t
ORIGIN      
        1 cagcgcgcgg ccaaatatcc actgccaaaa acggaggttt tgtagacgat atgtctgggc
       61 aggagctgta accgtcttcc cgcacccggt cacaacaaat tgatattttc aagcttattt
      121 tttagcggtt ttgtcaggta aaatgctaaa tctttgaaaa atgctctatt gtcgctatga
      181 cgtgcggaaa gtcggattct actgtctctc cctggcatgt ttcttgccct cgttttcaca
      241 ggtactgttg tctgctgcta ctgcgaggtg ttcgatgtca tggattgtgc cggtcctgct
      301 gcgtatcact gcggcgtata tagtcgtccc ccttttagtg aaaccgctcg tggacatgta
      361 tccgcagcgg actctgatct tgcttcaatt tgctggatgc ttcgtgctcg cgctgcttgt
      421 ggcccttgcc cttcagcaac ttcacatcga ctggcggatt gtggccgtag gcttcggcaa
      481 tggcctcgcc gcctattgtc actacaaagc catagccatc agcctgagtc gtaccgcgct
      541 attcgcgttt tgggatgacc tgctggccat ggggctcagt tatgtgcttc tgcgcgaggg
      601 acagtttctc aacgctcgca tactcttggg cattggactg agtgtcggcg cggtgatcgg
      661 ctttaccgtc catagcgctc atccccagcc cctcggtgaa caggcatcca cgcgcacgcc
      721 cctgcggctg tacctgtatg ccggcgctta cagcctactt ctcggaggca gcgtgttttt
      781 tatgcgctac ctgggcgtcc acggcacggg acttgggacc ttcctggtga actggtgtag
      841 cgggatcctg ggtgccgcac tcctgctcgt cctgacttcg ccggaggcag ccacggccat
      901 caccaccctc tccaagaggc ccctggttcg ccttggaaac ctgagcctgg tcactctcgt
      961 ggcgttaagt gcggcgttca tggcataccg actggcgccc caaaccgttg tgcaaccgtt
     1021 gttcctggtg ggggagatgg tggccccggc catcttgggg ctctacgtgt ttgccgaacg
     1081 gaataccttg gatcgttggg aatatctcta ttttgggctg gggctcgccg gtggtcttat
     1141 ggtggccctg agctttgcat gaagacgtta cagtgtgggc catgtgcatg gcaccagcac
     1201 tgacctgcgg cgcacacggc cattacaccg cctcaacaca ggagaggaca cgccttatga
     1261 gttagagatt gggcgagtcc cattcgaatt caggggtg
//
LOCUS       DASQSL010002009         1004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_119862, whole genome shotgun sequence.
ACCESSION   DASQSL010002009 DASQSL010000000
VERSION     DASQSL010002009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119862"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1004
                     /gene="ppk1"
                     /locus_tag="VE844_20245"
     CDS             <1..>1004
                     /gene="ppk1"
                     /locus_tag="VE844_20245"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013221139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HZC03591.1"
                     /translation="ELSSRRFADAVRLEVADDCPADITAFLLQQFKLTEADVYQCKGP
                     VNMARLLAIYDLVHRPEIKYPGFTPSQPLRITRNVDLFEAIRKGDILLHHPFESFAPV
                     VDFVRQAANDPEVLTIKQTLYRTGSDSAIVEALIDAARAGKEVTVVIELRARFDEAAN
                     IELANDLQEAGAHVVYGVVGHKTHAKMILVVRREGRQLRRYVHLGTGNYHARTARLYT
                     DYGLFTCDTAIGEDVHKVFHQLTALGKPGKLKKLLQSPFTLHKTLLRHIEREIRFARE
                     GRPARIIAKMNALVEPQVIRVLYKAAQAGVKIDLMVRGVCALRPGIKGVSENIQVRSI
                     "
BASE COUNT          202 a          293 c          300 g          209 t
ORIGIN      
        1 gtgaactctc ttcgagacgc tttgccgatg cggttcggct ggaggtggcc gatgactgcc
       61 ccgccgacat taccgccttt ctcctgcagc agttcaaatt gacagaggcc gatgtctatc
      121 agtgcaaagg accggtgaat atggcccggc ttttggccat ctatgatctg gtgcaccgcc
      181 cggagatcaa atatccgggc ttcaccccga gccagccgct caggatcacc cgcaatgtcg
      241 atctgttcga ggcgatccgt aagggcgata tcctcttaca ccaccccttt gagtcctttg
      301 ccccggtggt ggattttgta cgtcaggccg ccaacgaccc cgaggtcttg accatcaaac
      361 agaccttgta tcggactggt tctgactcgg cgatcgtgga ggcgctcatt gatgctgccc
      421 gggccggcaa agaggtgacg gtggtgatcg aactgcgcgc ccgtttcgat gaggcggcca
      481 acatcgagct cgccaatgat ctgcaagaag ccggcgcgca tgtggtctat ggggtggtcg
      541 ggcacaagac ccatgccaag atgatcctgg tggtgcggcg tgaaggcagg caattgcgcc
      601 gctatgtgca cctcgggacg ggtaattacc acgcccgcac ggcgcgcctg tataccgatt
      661 acgggctatt cacctgtgat acggccatcg gtgaggatgt gcacaaggta tttcatcagc
      721 tcaccgcgct aggcaagccg ggtaaactca aaaagctctt gcagtcgccc ttcaccctgc
      781 acaagaccct gctgcgtcac atcgagcgcg agatccggtt tgcccgagag ggaagaccag
      841 cgcgcatcat cgctaagatg aacgcactgg tcgagccgca ggtgatccgg gtgctgtata
      901 aggctgctca agcgggggtc aagatcgatc tgatggtccg cggggtctgc gcgctccgcc
      961 cgggtatcaa gggtgtttca gaaaatatcc aggtccgctc catc
//
LOCUS       DASQSL010002010         1297 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_164250, whole genome shotgun sequence.
ACCESSION   DASQSL010002010 DASQSL010000000
VERSION     DASQSL010002010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164250"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..719)
                     /locus_tag="VE844_20250"
                     /pseudo
     CDS             complement(1..719)
                     /locus_tag="VE844_20250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008932464.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
     gene            complement(842..>1297)
                     /locus_tag="VE844_20255"
     CDS             complement(842..>1297)
                     /locus_tag="VE844_20255"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HZC03592.1"
                     /translation="EDVGNPDTTLVGNRLRCGNNGPRAGRRALKMRKWLTSVLFSIGL
                     GLALAGPGYSTHVEERMARGQPVHDVIISRWVREALYEDPKMRSAAINVTIYSDHVVL
                     RGLVLNRKQAERAVEVARSVPSVKSVQERLVIINRTSDAKKRFLKQLTR"
BASE COUNT          273 a          402 c          346 g          276 t
ORIGIN      
        1 tattgatggg gatggcaaaa ccgatcccga tgttgccgcc gctgctggtg aatatcgcgg
       61 tgttgacgcc cacgaggcgt ccctgcaggt ccactaaagc acccccggag ttgcctggat
      121 tgatagccgc gtcggtctgg ataaagtcct catgaccttc gatgccaagc ccgctgcgcc
      181 gagcgcactg acgatacccg aggtcaccgt ctgactcagc ccgaaggggt tgccgatggc
      241 tacaacgaag tcgcccacct tgagctggtc ggagccccca tcggcaagtc agtcagggcg
      301 tcggagggga ccttaacgac gcccacgtcc gtctccggat cggtcccgat gagctcggca
      361 ttgtagctac ggccatcgct caactttacc gtgatctgat cggcattggt gatgacgtgg
      421 gcattggtga ggaccaggcc tcgctcggca tccacaatca cgcctgatcc gaggctttgt
      481 gtcctgcgct caagcggctc gtcaggaaaa tcgaagaaga accggaaaaa tgggtcattg
      541 aagagcggat tttgctcgat ccgcatgcgt ccctcagtgg cgatgttcac caccgccagc
      601 gtcacgcgct ccaacattga tgcgaggctc ggaactccct gctcgccggc agcccagggc
      661 agcgcggccg ctacactgct cgaaaacaac gcacaaacga ccaagcctgc catcagcatc
      721 caatccctga taacgggctt gcaggctgag ctcagattcg gtaaccgctg tttaagcacg
      781 gtcggcatca aagtcgcagg gttcaaccca tttcgggcgc aatctgcgta cataagcctc
      841 cttaacgcgt aagctgtttg aggaaacgct ttttggcgtc agacgtccgg ttaataatca
      901 ccagcctctc ctgcacactc ttgacgcttg gtacgctacg agcgacctca acggctcgct
      961 cggcctgttt cctgttcagt accaaacccc tcagcaccac atggtcagag tagatcgtga
     1021 cgttgatggc tgcgcttcgc attttcggat cttcatacaa agcctctctt acccagcggc
     1081 taatgattac gtcgtgaacg ggctgccccc tcgccatgcg ctcttcgaca tgcgtgctat
     1141 agccagggcc ggcgagcgct aacccaaggc caattgagaa cagaactgaa gttaaccact
     1201 ttcgcatctt taatgcgcgg cgcccggcgc gaggtccatt gtttccgcat ctaagcctat
     1261 tgcccaccag cgttgtatca ggatttccga catcttc
//
LOCUS       DASQSL010002011         1664 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_119866, whole genome shotgun sequence.
ACCESSION   DASQSL010002011 DASQSL010000000
VERSION     DASQSL010002011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1664
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119866"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            187..969
                     /locus_tag="VE844_20260"
     CDS             187..969
                     /locus_tag="VE844_20260"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HZC03593.1"
                     /translation="MAYADITIRDRNPVKRWIQRRRLSDALAVLSNTRFRDRPRILDF
                     GAGNGELVRQMASIAPIAAWVYEPTPSLMAEAKENLSGLERVTFVESLASVESAFFDY
                     VFCLEVFEHLPEKETLAAIAEIRRLLKSSGVAVIGVPHELFAPALFKGIFRMSRRYGD
                     FDASPRHILAAAVGRPPLLRPTSEISPGLAFHFHHLGFDFRALEQKLRQHFKVEKKRF
                     SPFPSLGAALNSEVYFILRLPSCHSGPLSASSASTFQPRADA"
     gene            complement(1060..1491)
                     /locus_tag="VE844_20265"
     CDS             complement(1060..1491)
                     /locus_tag="VE844_20265"
                     /inference="COORDINATES: protein motif:HMM:NF033580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZC03594.1"
                     /translation="MVLVDGTGTPLGAYLEAASPAEVTLLETTLDTVAVGRPGKPGRP
                     RKRPERLIADRGYDSNPLRARLARRGIEPIIPARRNHKHATHQDGRKLRRYRRRWIVE
                     RTFAWLGHFRRLVVRYERLITTYAGFFHLACALLTLRRVVK"
BASE COUNT          355 a          486 c          448 g          375 t
ORIGIN      
        1 cggaggtgat gaggcgacat cgacagggca atacattagt gtttattccg attaagctgt
       61 aaatgcccac agagcctata actcatttca aaacccaccg gctagaatat tataaggccg
      121 tgattcgcaa agataaatgc aagcctggac atggcgcggc gtaggctgac gagagcgcaa
      181 cggaaaatgg catacgcaga cataacgatt cgtgaccgca acccagtcaa gcgctggata
      241 cagcgacgtc ggctttccga tgcccttgcc gtcttgagta atactaggtt tagagatcgt
      301 cctcggatac tggacttcgg ggctggtaat ggcgaactcg tccgccaaat ggcaagcata
      361 gcacctattg cagcttgggt atatgaacca acgccgtccc tgatggcgga ggcgaaagaa
      421 aacctatcag gcttggagcg ggtcactttc gtggagagcc tcgcttcagt tgagtctgca
      481 ttctttgact acgtgttctg cttggaggta tttgagcatt tgcccgaaaa agagacactc
      541 gcggccatcg cggagattcg tcgtttactg aaatctagcg gcgttgctgt gattggtgtg
      601 ccccatgaac tgtttgcgcc cgcgctcttt aagggcatct tccgtatgtc acgccgttat
      661 ggtgatttcg acgcaagtcc acgccatatt ctcgctgcgg ccgtgggtcg tcccccatta
      721 ctgcgtccga cgtccgaaat ctccccaggc ttagcatttc atttccacca tcttggattc
      781 gatttccgtg cgctggaaca gaaacttcga cagcacttca aagtggaaaa gaagcggttt
      841 agcccatttc cgtccttggg cgctgctctc aattcggagg tctattttat actccgtctg
      901 ccttcatgcc attcgggccc tctgtcagca tcatctgctt ccacatttca gccacgagct
      961 gacgcgtgat gcgcacatat caaatcgcgg caccgggata tgagtattgt taccagcagc
     1021 aatccatcca gggcctgtcg gaggaatcta ggtatcaagt catttcacaa ccctccgcaa
     1081 cgtcaggaga gcacaggcca gatgaaagaa acccgcatag gtcgtgatca ggcgttcata
     1141 ccgcacgacc aggcggcgga aatggccgag ccacgcgaac gtgcgctcga cgatccaccg
     1201 gcgccgatag cgccgcagtt tccggccatc ttgatgcgtg gcgtgcttgt ggttgcggcg
     1261 agcggggata atcggctcaa tccctcgacg ggccaatcga gcccgcaggg gattgctgtc
     1321 atacccccga tcggcgatca accgctcggg ccgcttgcgc ggccgccccg gcttcccggg
     1381 ccgcccgacg gcgactgtgt cgagcgtcgt ttcgaggagg gtaacctccg ctggggaagc
     1441 cgcctccagg tatgctccca acggagtacc cgtgccatcg accagcacca tccactttgt
     1501 gcccttgccc cgcttagttc tcccgacctt ggtccccctt ttttggcagg gatgaaggag
     1561 ccatcggcaa agcactcatc ccagcgcagc ttctcctggt cattgagctg ggccaagaac
     1621 gctcgccaaa gcttcaagag cactctcgtg tcttcccacg gctt
//
LOCUS       DASQSL010002012         1025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_164261, whole genome shotgun sequence.
ACCESSION   DASQSL010002012 DASQSL010000000
VERSION     DASQSL010002012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164261"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(152..649)
                     /locus_tag="VE844_20270"
     CDS             complement(152..649)
                     /locus_tag="VE844_20270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010961937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HZC03595.1"
                     /translation="MTEIATLFHQLTLGVYVVGVANAGQRDGFTAAWVMQVSFDPLLL
                     ALSINPANASYPLLRAGGGFAVSVLKQGQLELARRFGTRSGRDQDKLAGIGWRPGRNG
                     APILEDALAYFDCELNGSMRSGDHELVLGRVIDGRILAHDAEPLAYADTGDMDGSSAL
                     YPANF"
BASE COUNT          252 a          283 c          295 g          195 t
ORIGIN      
        1 aggaaagcaa tcaatattag atattatcgg ttttaagcag aactagcgaa actcggcaaa
       61 tcaaaggctt caagagagcg acggcaggaa acccggaagt tatgcaagcc gcaggcaacc
      121 tccatacagt taggccgcgc gggccgagag ctcagaagtt cgcgggatag agagcgctgc
      181 tcccatccat gtcaccggtg tcagcgtacg ccagcggctc ggcgtcgtga gccaggatgc
      241 gcccatcaat gacgcggccg agcaccagtt catgatcccc acttcgcatg ctcccgttta
      301 gctcgcagtc aaagtaggcg agtgcgtcct cgagaatggg tgcgccgttg cgccctggac
      361 gccagccaat acctgccagc ttgtcttggt cacgaccgga ccgagtccca aatcgccgag
      421 ccaactcaag ctgcccctgc ttcaagacgc tgacggcaaa tccgccgcca gcacgaagga
      481 gaggatagga ggcgttggcc ggattgatgc tcagtgccag cagtagaggg tcgaacgaca
      541 cctgcatgac ccaggcggcg gtgaaaccat cccgttgccc agcgtttgcg acgccgacga
      601 cataaacgcc gagcgtcagc tggtgaaaga gcgttgcgat ctcagtcata ctgcgagtcc
      661 ttctgggctg ccgaaggccg ggcgtcggcc caacagtgat tcaacggaca gaattgcccg
      721 acgattgtta ataatacgga caccctcgtc acggacttaa cctttttagc gtaggctacg
      781 atttttttcc tgaaccaaca gtaggagcga acctcatgga gtagaattgc ataaaggtac
      841 aaaagcggca atgaacatta agatttcact gcgtcagtgt tgatatagcg atacagcgta
      901 gtacgtgaga tattgagtgt ttctgaggca gacgcagcat gcgatcctcg gaggcgaact
      961 tgcagcccaa ggcacgcttg atggccaggt actgctcgat ccggtccgtg cccgggagct
     1021 gcagg
//
LOCUS       DASQSL010002013         1235 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_108939, whole genome shotgun sequence.
ACCESSION   DASQSL010002013 DASQSL010000000
VERSION     DASQSL010002013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108939"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1235
                     /locus_tag="VE844_20275"
     CDS             <1..>1235
                     /locus_tag="VE844_20275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03596.1"
                     /translation="GHRAHGHLDLSAEVREKLLSLSPATVDRLLHRVRSGGAARGFST
                     TRRGTWLKHQIPVRTFAEWDEVKSGFFEADLVAHCGGCLTGSYLHSLVLTDVASGWTE
                     CVALLVRDQGVVVEAFEATRQRLPMPLLGLDTDNGSEFINQTLIDYCQVSNITFTRAR
                     PYRKNDQCHVEQKNGSVVRCWVGYERFEGVEACRLLAQLYETLRLYINYFQPSVKLTE
                     KTRIGSHVTKRYDRAQTPCQRLLDSAEVDETVKAELRAEAIHLDPVALLTKIEQLQDR
                     LWQLTQPILESPESSVIEPSTPLAQSASEGQDSLLPIVFKALGSQLRGEQANRQYRHS
                     PRLKRPRCWRTRKDPFEAVWEELKTHLAQHPELTAKELLERVQLRHPGQYTPGQLRTL
                     QRRVKVWREQQAIELLTPF"
BASE COUNT          265 a          343 c          380 g          247 t
ORIGIN      
        1 aggccatcga gcgcacgggc atctggatct cagcgcagag gtacgcgaga agcttctctc
       61 cctcagtcct gccacggtcg accgactact tcatcgagtg cgttcgggtg gagccgcaag
      121 agggttttca acgacgcgcc gtgggacgtg gctcaagcat cagatcccgg tacggacgtt
      181 tgcggaatgg gatgaggtca agtcggggtt cttcgaagca gatctggtgg cccattgtgg
      241 agggtgtctt accggcagct atctgcacag cctggtattg actgatgtgg cgagcggttg
      301 gaccgaatgc gtggcactgc tggtgcggga tcaaggtgtg gttgtggagg cctttgaggc
      361 cacccggcaa cgcttgccaa tgcccttgct gggtttggat accgataacg ggagtgaatt
      421 tatcaatcag acgctgattg attactgcca ggtatcaaat attaccttca cccgtgcccg
      481 gccctatcgc aagaacgacc agtgccatgt cgagcaaaag aacggctcag tggtgcggtg
      541 ctgggtcggc tatgagcgtt tcgaaggggt agaggcctgc cggttgctcg ctcaacttta
      601 tgagacgctg cggctctata tcaactactt ccagccctca gtcaaactga ccgagaaaac
      661 ccgtatcggg agtcatgtca cgaagcgcta cgatcgggcc cagacccctt gccagcgatt
      721 gttggactcc gctgaggtcg atgagaccgt taaggcggag ttacgggctg aggcgatcca
      781 tctggatccc gtggcattgt tgaccaagat cgagcagcta caggataggc tctggcagct
      841 tacccaaccg atcctagagt ctccagagag ctcggtcata gagccgagta ctcccctcgc
      901 acagagcgcc tcggagggac aggatagcct cctgccaatc gtgttcaaag cgctggggag
      961 ccaattacgg ggagagcagg cgaaccggca gtaccgccac tcaccccggc ttaaacgacc
     1021 tcgttgctgg cgcactcgca aagacccctt tgaagcagtg tgggaggagc ttaaaaccca
     1081 cttggcccag cacccggagc tcaccgcaaa agagctcttg gaacgcgtgc agttgaggca
     1141 tccagggcag tatactccgg ggcaactgcg cacgttacag cggcgcgtga aggtctggcg
     1201 ggagcagcag gcgatcgaac tgctcacccc cttct
//
LOCUS       DASQSL010002014         1336 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_119881, whole genome shotgun sequence.
ACCESSION   DASQSL010002014 DASQSL010000000
VERSION     DASQSL010002014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1336
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119881"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1336)
                     /locus_tag="VE844_20280"
     rRNA            complement(<1..>1336)
                     /locus_tag="VE844_20280"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          244 a          441 c          337 g          314 t
ORIGIN      
        1 aacccttggg acctacttca gccccaggat gcgacgagcc gacatcgagg tgccaaaccg
       61 ggccgtcgat gtggactctt gggcccgata agcctgttat ccccggagta ccttttatcc
      121 gttgagcgac ggcgcttcca catgctaccg ccggatcact aaggcctgct ttcgcacctg
      181 ctcgacgtgt ctgtctcgca gtcaagctcc cttgttgcct ttacactctg cgcacgattt
      241 ccgaccgtgc tgagggaacc tttgcgcgcc tccgttacat tttgggaggc gaccgcccca
      301 gtcaaactac ccacctgaca ctgttcgccc cccggtttac ggcggggcgt tagaagccca
      361 agacaccaag ggtggtatct caaggatggc tccacagcgg ccgaagccgc tgcttcgcag
      421 cctcccacct atcctgagcg aggtgcctca gactccaata tcaagctgta gtaaaggttc
      481 acggggtctt tccgtctggc cgcgggtact cggcatcttc accgagactg caatttcacc
      541 gagcccctcg ttgagacagc gtccaagtcg ttgcgccatt cgtgcaggtc ggaacttacc
      601 cgacaaggaa tttcgctacc ttaggaccgt tatagttacg gccgccgttt accggggctt
      661 agcttcggcg cttcgccgtc cgaagacggc taacgcctcc gcgtaacctt ccggcaccgg
      721 gcaggcgtca gcccctatac atcgtctttc gacttagcag agacctgtgt ttttggtaaa
      781 cagtcgcttg gaccaattca ctgcggcccc ctcgggcttc ccgcgcgaag cggtacaccc
      841 taccggggcg ccccttctcc cgaagttacg gggcaatttt gccgagttcc ttaacgaggg
      901 ttatctcgat caccttagta ttctctactt gtccacctgt gtcggttttg gtacgggcac
      961 gcacgtcctg cctagaggtt tttcttggag gtttggcgtt ggggactcgc cggccttacg
     1021 gccagctggc atcgcgcctc acataaacga tcctccggat ttacctgaag gacctagcta
     1081 cacgcttacc cctggacaac catcgccagg gatcccttac ccttcctcgt ccccccatcg
     1141 gtcataacgg attcgacgtg gtacaggaat atcaacctgt tggccatcgg ctacgccttt
     1201 cggcctcgcc ttaggtcccg actaaccctg agcagacgaa ctttactcag gaacccttgg
     1261 acaatcggcg gaggagattc tcactcctct ttcgttactc atgccggcat tctcacttcc
     1321 gtgccctcca cggctc
//
LOCUS       DASQSL010002015         1654 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_119915, whole genome shotgun sequence.
ACCESSION   DASQSL010002015 DASQSL010000000
VERSION     DASQSL010002015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1654
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119915"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1163)
                     /locus_tag="VE844_20285"
     CDS             complement(<1..1163)
                     /locus_tag="VE844_20285"
                     /inference="COORDINATES: protein motif:HMM:NF015515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HZC03597.1"
                     /translation="MEPSILSLLPPVVAIGLAIATRKILLSLGIGIVLGALLYTQWNV
                     LESVSLVGEVAGGLIIDEGAVAEEMYILAFVVLLGVLTSFIYISGGLQAFSDWAITKV
                     RTRFQAQLVPYILGIVIFFDDAFSCLVGGNVSRTITDKYRISRAKLSYIVDSTAAPII
                     ILVPISGWAAFIAATMTGILNRNDVTEFSGYEAFLSSIPTMYYPITAILFVFAVAYFG
                     LNFGPMRKHERRAVDEGELVDTSHGPVPGETDRNLPTREDGKVRDLVVPVATLIGVTV
                     FLALWIGISNAEGAITPMQVLANTDVIIALFYGGLIACAVAGAMLLLKRTPANQVARA
                     GLAGIRSMLVAAAVLFLAWITAEIISLLGIGEYLAGMINTDLAFALLPALLFLL"
BASE COUNT          355 a          496 c          485 g          318 t
ORIGIN      
        1 aggaggaaca atagggccgg cagcagagcg aatgccaggt cagtattgat catcccggcc
       61 aggtactcgc ctatccccag cagggagatg atctcggctg ttatccacgc caggaacaac
      121 accgcggcag ccaccagcat cgacctgatg cccgccagtc cagcccttgc cacctgattg
      181 gcgggggttc tcttcaacag cagcatcgcc cccgcaacgg cgcacgcaat gaggccacca
      241 tagaagaggg cgatgatgac gtcggtgttc gccaggacct gcatcggggt tatcgccccc
      301 tcggcgttgg agatcccgat ccagagcgcc aggaacacgg tgacaccgat gagggtcgcc
      361 accggcacaa ccagatccct gaccttgcca tcctctcgcg tcggcaggtt ccgatcggtc
      421 tcacccggga cgggcccgtg ggaggtatcg accaactctc cttcatcgac cgcgcgcctt
      481 tcatgcttac gcatcgggcc gaagttgagt ccgaaatacg caacggcaaa aacaaacagg
      541 atcgcggtga tcggatagta catcgtcggg atcgacgaca ggaacgcttc gtagccggag
      601 aactcggtga catcgtttct gttcagaata cccgtcatcg tggccgcgat aaaggcggcc
      661 cagccggaga tcggcaccag gatgatgatg ggcgcggcgg tcgagtccac gatgtaggag
      721 agcttggccc gtgagatgcg atacttgtcg gtaattgttc tgctgacgtt cccgcccacc
      781 aggcagctga aagcgtcatc gaagaagatg acgattccca ggatgtacgg gaccagctgg
      841 gcctggaagc gtgtacggac cttcgttatt gcccagtcgg agaaggcctg gagtccgccc
      901 gatatgtata tgaaagaagt cagtacccca agcagcacaa cgaatgcaag aatgtacatc
      961 tcctccgcga cggcgccctc gtcaatgatc aggccacccg ctacctcgcc gacgagcgag
     1021 acgctctcga gaacgttcca ctgggtgtac aacagtgcgc cgaggacgat cccgatcccg
     1081 agtgagagca ggatcttcct ggtggcgata gccaggccga tcgcgacgac cggcggaaga
     1141 agagacagaa tagacggttc cattgacgag acctcctgag ggtgcggagg gttactccgc
     1201 cgacctctga gctactacag tctgtgccac gacgttacgc cgtggatctg aactaataga
     1261 gtgctctatc tcaggacgcc ctgttcatcg gttcctacct cctcgaaggt gcttgccgac
     1321 gccggtaatt gtacccggtg gtgcatgacc caaaccttgc aactcgcctc cgcgataaat
     1381 ggctcgtcgt gacgctacct agtccaaatt tcctagataa cccagtcaat ttgggggatg
     1441 cgcttttccc tcccgggcgt ctatgctggt cccgtcgttt acagcaagcg cgtgtgtaac
     1501 gccctcaaga aggaggcaag aaacatgcct atcgtccaac gtttcgctca agtgttcggc
     1561 gcgatctacg tgctggtggg cgtggcgggc ttcatccctc cgctcctgat aggggaggtg
     1621 ccgggggtct tgggaccctt cgtcgggctc ttgc
//
LOCUS       DASQSL010002016         1118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_38845, whole genome shotgun sequence.
ACCESSION   DASQSL010002016 DASQSL010000000
VERSION     DASQSL010002016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1118
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38845"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(214..474)
                     /locus_tag="VE844_20290"
     CDS             complement(214..474)
                     /locus_tag="VE844_20290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012248512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03598.1"
                     /translation="MTRVVITAMLAWLTVGVWAVPARAAVDIHIGIPGVVIVPPSDYY
                     VYPRYVYPYSEPRHYYGKHHHRWHHHGHRHHGHRHHHHGHGR"
     gene            complement(659..943)
                     /locus_tag="VE844_20295"
     CDS             complement(659..943)
                     /locus_tag="VE844_20295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014590919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03599.1"
                     /translation="MRTWPILGVLMVVSLGLVRPVLGHEWKDEFRDGPCQVKVEAKRG
                     EFKREIKCKDGIGAHWQGEWKKEFWDGPCQVKVEAKRDEYKEEVKCDRQQ"
BASE COUNT          218 a          339 c          321 g          240 t
ORIGIN      
        1 catgcgaata gatatccaga ggaatggcgt gtggcctacc ggcacttgca ggctgccagg
       61 ctggcccgcc gcgggcatga gcggacgcgc acggcgaggg ggaaaggagg gcgtctcaaa
      121 agattcgcgc cgcgggagaa ggtcagctta gctagccatc catgtcacgg acactttggc
      181 gaggattgta ggtgttgtgg tgcctctctc catctatcgt ccatggccat gatggtgatg
      241 ccgatggcca tgatgccgat ggccatgatg gtgccatcga tgatggtgtt taccatagta
      301 atggcgtggc tcgctatacg gatagacata gcgaggatag acatagtaat cggatggtgg
      361 cacaatgacc acgcctggga tgccgatgtg aatatcgacc gcggccctcg ccgggacggc
      421 ccagactccg acggtcaacc acgcgagcat ggcggtgatg acgactcgtg tcatgcagat
      481 ctcctttggt gatgaatgat caacactcgg gactcttccg tggatgctcc catgctttcc
      541 ttggaagacc cgtgttcgta catcccatgt ctgggagaga cgtgcccctg acaggtgaac
      601 ggagtgagcg ccatgtgttt ccccggatgt gatccgctgt gcgctgcggc acggctggtc
      661 actgctggcg gtcgcacttg acctcttcct tgtactcatc gcgcttcgct tcgaccttca
      721 cctggcatgg accgtcccag aattctttct tccactcgcc ctgccaatga gccccgatgc
      781 catccttaca cttgatctcc cgcttgaact ccccgcgctt cgcctcgacc ttcacctggc
      841 acgggccgtc ccggaactcg tccttccact cgtgaccgag cacaggcctg acgaggccaa
      901 ggctgacgac catcaagacg cccagaatgg gccacgttct catcggctca cctctgctga
      961 gacattatcc gatgccaaag gcctcgctcc cgtgccatga tgaacggaga agctgcccgg
     1021 tgggcttcgt caccaggatg cttcacatga cgtcgagaag caccttcaca cgggttatag
     1081 gcacatctta cacggcacgc ctcccatagt cgtcgtgg
//
LOCUS       DASQSL010002017         1536 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_201903, whole genome shotgun sequence.
ACCESSION   DASQSL010002017 DASQSL010000000
VERSION     DASQSL010002017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201903"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..982)
                     /locus_tag="VE844_20300"
     CDS             complement(<1..982)
                     /locus_tag="VE844_20300"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HZC03600.1"
                     /translation="MRSLLALSVWTLLGVGCATTPQSRVLPAASVTTSPVVAEINTAL
                     TTASQTPASSADYRLGPEDFLEITLFNVPEGETGVTPRTSGVRVSQEGKITLPLLGDI
                     TVAGLTTSALEQVLRQRYDQYLQNPQVGVRVKEYHSQQVSVIGAVGRPGTFQLSGPKT
                     LIDLLAMAGGISDKASSQVHIYRQAQAGRQSYIVDLLALASNPDAVNMPVLAGDVINV
                     PQAGMFFVDGAVGRPGSYPLLSSYTLTQALAVAGGVDETLASYSSVSIFRRQGGLEPE
                     IIPANLSQILDGKARDPQIAPEDVIVVPRSTAKYLIDRFIGTIGLGSVGGF"
     gene            1230..1505
                     /locus_tag="VE844_20305"
     CDS             1230..1505
                     /locus_tag="VE844_20305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03601.1"
                     /translation="MPKTTTTPEELTNQLTGDLSPEEVQASILSRLKDTKWHIEEVMK
                     HYPTEPMGSALDRICRAQTLLAEIAKDLAIVALEEATSTQSSPAHNY"
BASE COUNT          334 a          470 c          415 g          317 t
ORIGIN      
        1 aaaagccgcc cacactaccc aaacctatag tgccgataaa gcgatcgatg aggtacttcg
       61 ccgtgctcct gggtacgacg atcacgtctt cgggtgctat ttgggggtct ctcgcctttc
      121 cgtccaggat ctgactcaga ttggccggga tgatttcggg ttctagcccc ccctgtcgac
      181 gaaaaatgga aacgctacta tagcttgcca gcgtttcatc cacccccccg gcgaccgcca
      241 gcgcctgtgt aagtgtgtaa gagctcagaa gggggtatga gcccggccgg cctaccgcac
      301 cgtctacgaa aaacatgccg gcctgtggaa cgttgatcac atcgccggcc agcacgggca
      361 tgttgactgc atcggggttg ctggccaggg cgaggaggtc gactatgtag ctctgacgcc
      421 ctgcttgtgc ttggcgatag atatgcacct ggctgctggc cttgtcgctg atcccgccgg
      481 ccatggcgag caggtcgatg agcgtcttgg gcccgctcag ctgaaacgtg cccggtctcc
      541 cgaccgctcc tatcaccgac acttgctggc tgtgatattc tttgacccga acccccactt
      601 gagggttctg aagatattga tcgtagcgct gccgcagcac ctgctccagc gcggaagtgg
      661 tcaatcccgc gacggtgatg tcccccagca gcggcagcgt gatcttaccc tcctgactca
      721 cccgcacccc agacgtccgg ggggtaaccc ctgtttcacc ctcgggcacg ttaaagaggg
      781 tgatctctaa gaagtcttcg gggcctaagc ggtaatcagc cgaagaggca ggcgtctgcg
      841 aggccgtggt aagagcagtg ttgatctcag ctacgacagg agaagtggtg acacttgcag
      901 cgggaaggac tcggctctgt ggtgtcgtcg cacaccctac tcctaacaga gtccataccg
      961 aaagtgccag tagacttctc atccaaaagc tgcaaggtct gcgttccagc cgtttcctca
     1021 tggcctttcg ctccttcaca atcaaagtgt gtacccctcc ggcggtgcaa gcgacgtgag
     1081 tcctgtcaga gatggtgtgt gagggccacc cgcaggttag ttgcacacga gtgctttgac
     1141 aacccccgtg tgcaggagcc agtctcttcc ctacccctta ccaagccctt acattgttgc
     1201 cacaacggct ctgttagaat cactggtata tgccaaagac cacgactaca ccggaggaat
     1261 tgaccaatca attgaccggc gatctcagcc ccgaagaagt ccaagcatct atcctctccc
     1321 ggctcaagga taccaaatgg catatcgaag aggtcatgaa acactatccc acagagccga
     1381 tgggaagcgc gcttgatcgc atctgtcgcg cgcaaacgct cctcgcggaa attgccaaag
     1441 accttgccat cgtggcactt gaggaagcca cgagcacgca atcctccccc gcacacaact
     1501 actgacccgg ccattaaaag ctaaagtgta ggcgag
//
LOCUS       DASQSL010002018         1140 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_94784, whole genome shotgun sequence.
ACCESSION   DASQSL010002018 DASQSL010000000
VERSION     DASQSL010002018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1140
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94784"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            8..433
                     /locus_tag="VE844_20310"
     CDS             8..433
                     /locus_tag="VE844_20310"
                     /inference="COORDINATES: protein motif:HMM:NF025167.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HupE/UreJ family protein"
                     /protein_id="HZC03602.1"
                     /translation="MSLAMLGVVHVPPAPVEALIAVSLFIVALELTRATPGWALWTRR
                     YPWGMALLFGLLHGLGFAGALAQVGLPPHEIPLALFAFNIGIELGQVLVIGLVLVASA
                     ALAIFPVRWPQASARIPAYAIGSVAAFWVFDRVWGLFVP"
BASE COUNT          214 a          343 c          322 g          261 t
ORIGIN      
        1 catcaccttg tccctggcca tgctcggcgt cgtccacgtg cccccggccc ccgtggaggc
       61 cctgatcgcg gtcagcctct tcatcgtcgc cctggagctc acccgggcaa caccggggtg
      121 ggccctctgg acacgccgct acccctgggg tatggccctc ctctttgggc tgttgcatgg
      181 cctggggttc gcgggcgccc tggcgcaggt cgggctccct ccccatgaga tcccgctcgc
      241 gctcttcgcc ttcaatatcg ggattgagct cggacaggtg ctagtcattg ggctggtgct
      301 ggtggcgagc gccgcgcttg cgatcttccc ggtgcgctgg ccgcaggcca gtgcacggat
      361 ccccgcgtat gccatcggct ccgtcgccgc cttctgggtc ttcgaccgcg tctggggact
      421 gttcgtgcca tagcgcgcgc ctgccccatc gcgtgcgcgc cttccctatc ggcttcccgg
      481 tagtaatcgg gaaatgtttg gcgctaagga gttacgcctt acaatacaaa tagttgtgag
      541 cagtcttaca aaccgaaccg ataccgttgg cgaactcgga agcgtcaaaa tttctcctcg
      601 catttcactt ctttgaaggc attgaggctt ggaaaaagct cggcggaaat ctcggctgta
      661 tcgcggtgaa ataggttcgc caacagtagg tcatgagtgt ccctcaccac cgcggatgaa
      721 aatcgagagg ctattttggc tctcccggaa ttcccgtggt aacgggtcaa aactcactct
      781 ttcgtcgtgc tagaccattg gaaatattag gccgacctct aaacgatgtt ctgttttcac
      841 gggaattccg gaagagccgc tattttcagc agagtatccc gagggttttt ggtactgatc
      901 aattcacgtc gtagaatgac ggaagcccga cccagccgtc acacaagact tacaagcccc
      961 tagcagcccc tctgttcaac gatatctact actctcgagc tccctacggg tgcataccag
     1021 agcgcgcgtc ctgtcggcga tgctggatac cgtcgcgcat tagctataat gtatggttat
     1081 agccaatcag gaacgatccc ggaagggttt ggggaaggaa cgggctcagg gaaaagtacg
//
LOCUS       DASQSL010002019         2025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_201920, whole genome shotgun sequence.
ACCESSION   DASQSL010002019 DASQSL010000000
VERSION     DASQSL010002019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2025
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201920"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            266..1042
                     /locus_tag="VE844_20315"
     CDS             266..1042
                     /locus_tag="VE844_20315"
                     /inference="COORDINATES: protein motif:HMM:NF014732.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /protein_id="HZC03603.1"
                     /translation="MYNPVTPSNGTQASAAFTRVSEDEGSFSLSDLTKVILKRLWVIL
                     LVVCVVVGAAVGASLWQTPTYEASAQVWVDQKQGDQQTNLAGTVEGLQTIILTMIHAI
                     DSRPVAKEAIERLGLEMSPAELLDNLAIEQVESTSFIVLTYQGNDPQEAAQIVNTVGE
                     VSSELISDSSAAGSQLTANVYEEAIAPDSPISPDPLRNGILAALFGVMLGIGLALLME
                     YLDHSWRSPEEVEQVSGVPTFATIPEFSLTKSKRNKRTLA"
     gene            1039..1758
                     /locus_tag="VE844_20320"
     CDS             1039..1758
                     /locus_tag="VE844_20320"
                     /EC_number="2.7.10.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004713 - protein tyrosine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0004715 - non-membrane spanning protein
                     tyrosine kinase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CpsD/CapB family tyrosine-protein kinase"
                     /protein_id="HZC03604.1"
                     /translation="MTDPQSKTIVVSSQKLRKREDATLDLVTVYDPTGAASDAYRMLR
                     TNLFYALIDSPPKIIVLTSVSFGEGKSTTAANLAVTLAQADKHVLILDCDLRRPRLHS
                     MFDVSNTNGLVDILAGGSRMEEVWREPIPGLKLICAGPSLPNPAELLSSRRLAEFLAE
                     MRPRFDYVVVDAPPVGVSDSVVLAANGDGVLLVLDSQRTRKGPLRQALHSLQGVGANV
                     LGTVMNNFEVSRGANSPYSNL"
BASE COUNT          456 a          567 c          591 g          411 t
ORIGIN      
        1 aaagggccaa gaacagccgt ccgttcaacg tctcaggggc cagtatcaat cgtttgctca
       61 tcgtatcgcg ccctccacaa acactcgctg ggaaatcacc aggatagata gtagggaccg
      121 tcgcggtccg gtacgtgggc catccggcac attttatcgt agttgccccc tccggtgtcg
      181 caaaatgctt gggcagcagc taaactcaga attggcggaa gaccgccagc acgcaagttt
      241 gtacgatcgc cagaggggtg agaccgtgta taaccctgta acaccatcaa atggcaccca
      301 agcatcggct gccttcacca gggtttccga agatgaggga tccttctccc tgagcgacct
      361 cacgaaagtc attctaaagc gactttgggt tattctcctg gtcgtctgcg ttgtagtcgg
      421 ggctgccgta ggggcgagtc tgtggcaaac gccgacctac gaggcttccg cccaggtgtg
      481 ggtggatcaa aagcaaggcg atcagcagac gaacctggcg ggaaccgtcg aggggctcca
      541 aacgattatc ctgacgatga tacacgccat agatagccgc cccgtagcca aagaggccat
      601 agaacgcttg ggattagaga tgtccccggc cgagcttctg gataacttgg ccatcgagca
      661 ggtcgagagc acgagtttca tagtcctcac ctaccaaggc aacgacccgc aggaagccgc
      721 acagatcgtc aacacggtcg gcgaagtctc ctccgagctg atctccgaca gtagcgcggc
      781 cggcagccaa ttgacggcca acgtgtatga ggaggcgata gcacccgata gcccgataag
      841 ccccgacccc ttgaggaacg gtatcctggc ggccttgttt ggcgttatgc tcggcatagg
      901 tctggctctg ttgatggaat acctggacca tagttggcgc tcgccagaag aagtggaaca
      961 agtctcaggc gtacccactt tcgctaccat accggagttt agtcttacga agagcaaaag
     1021 gaacaaaagg acgttagcat gaccgatcca caaagtaaga ccatcgttgt ttcatcgcag
     1081 aagctcagaa agcgcgaaga tgctaccctg gatctggtaa ccgtctacga ccccaccggc
     1141 gccgcttccg acgcttaccg gatgctacgc accaaccttt tctacgcctt gatcgattcc
     1201 cctcccaaga taatagtgct gacgagtgtg agcttcggtg agggcaagag caccaccgcc
     1261 gccaacttgg ctgtgacgct agcgcaggcg gataagcatg tcctgatcct ggactgcgat
     1321 cttcgcagac ctcgtctcca tagcatgttc gacgtaagca atacaaacgg tctggtggac
     1381 atcctggctg gcggtagcag gatggaagag gtctggcgag agccgatccc aggattgaag
     1441 ttgatatgcg ctggtccctc gctgcccaac ccggccgagc ttctgagctc gaggcgtctg
     1501 gcggagtttc ttgccgaaat gcgaccgagg ttcgactacg tcgtggtaga tgcacccccc
     1561 gtaggggtgt ccgactccgt agtgctagcg gccaacgggg acggggtttt gctggttttg
     1621 gattctcagc gtacgcgcaa gggccctctg cgacaagctt tgcacagcct gcaaggcgtc
     1681 ggggcgaacg tgctgggaac ggtcatgaac aatttcgagg tttccagagg cgcaaacagc
     1741 ccgtatagca acctctaaag tagaggtgca gaagcgcgtt agcctcggca gttactcgga
     1801 cagctcgaag atgaatggct gggcaagcgg cggggggacg cactgagatc ctactgtgat
     1861 tgattatctg aacgcttcga cgttaagacg ccgcttactc tctggtagcg cctgggcctc
     1921 cggggggaga gtcggcgggg ccatgctcgg catagttacc aatggcctcc ttgcgcgcct
     1981 gctctctcca caagaattag gcgcgtactt tttggcgctg agcat
//
LOCUS       DASQSL010002020         2308 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_82241, whole genome shotgun sequence.
ACCESSION   DASQSL010002020 DASQSL010000000
VERSION     DASQSL010002020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2308
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82241"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            170..961
                     /locus_tag="VE844_20325"
     CDS             170..961
                     /locus_tag="VE844_20325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007921816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZC03605.1"
                     /translation="MRKNYATDLSDKEWAYLCRHLPEMPKDVKMRVHALRDILDAIFY
                     VLKSGCPWRLMPGDFPPWQTVFYHFRQFRLSGMWHRIFKILRAAERARMGRAPDASAA
                     ILDAQSVKTVEESARISGYDAHKNVKGRKRHLLVDTLGLPLSIYVTPANVQDRVGARC
                     LLSGLKPLAPRLKKIWADGAYGGEPLYEWCRREGDWDLEVVGRDRQSSGFQITAKRWI
                     VERTFGWLGMSRRLVKDYERKVQTSETLIELTMIRLILRRLVRQV"
     gene            complement(1093..1464)
                     /locus_tag="VE844_20330"
     CDS             complement(1093..1464)
                     /locus_tag="VE844_20330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000693973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZC03606.1"
                     /translation="MKLNHLNLTVTDVGAAREFLERYFGLRCAATRGDSFAALSDDDG
                     LFLTLMEGKKVEYPGTFHVGFAQESEEKVDEINQRLKDDGFEVKSPGRFHGSWTFYFH
                     APGGFTIEVLGSDDPQFPVGG"
     gene            complement(1511..1990)
                     /locus_tag="VE844_20335"
     CDS             complement(1511..1990)
                     /locus_tag="VE844_20335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015352578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HZC03607.1"
                     /translation="MEEPTTAADAFGEIILEVFRLNGRLIDAGDSMAAPVGQTSARWQ
                     VLGVVAGGPASVAQVARTMGLTRQSVQRTADLLAADGLVRYTDNPHHRRAKLMTMTPK
                     GQQALDYIQQRQARWANRIGKQHDLEQMRTAAMVLRQLRERLEQDEQDRDSSAGFDV"
BASE COUNT          458 a          657 c          681 g          512 t
ORIGIN      
        1 gtgagcgagg gcgccggccc ccagcccgaa gctcgggctg gggtcacccc ggtgacggat
       61 aggtgtagcg ccggctctgc ggccaggctt gctcattcct ctcagtttgg cgatctaaga
      121 gcctgttttg cagacttgaa agttgaggtg cccgtgtacg ctcgtgggta tgagaaagaa
      181 ctacgctacc gacctctccg acaaagaatg ggcctatctg tgtcgccatc taccagagat
      241 gcccaaagat gtgaagatgc gggtccatgc cctgcgcgac atactcgatg ccatctttta
      301 cgtcctgaaa agcggctgtc cctggcggct catgccgggt gactttccac cctggcagac
      361 ggttttctac cacttccgcc agttccggct gagtgggatg tggcatcgta tcttcaaaat
      421 cttgcgcgcc gcagagcgag caaggatggg ccgagccccg gacgcctcgg cggctatctt
      481 ggatgctcag agcgtgaaga cggttgagga gtcggcccgg atcagcggct atgacgccca
      541 caagaacgtg aagggccgca agcggcatct actagtggac acgctgggct tgccactctc
      601 aatctacgtt accccggcaa acgtgcagga tcgcgtcgga gcacgttgtt tgctctccgg
      661 attgaagccg ctggcgcctc ggctaaagaa gatctgggcg gatggggcct acggcggcga
      721 gcctctctac gaatggtgtc ggcgggaggg cgattgggat ctagaggtcg tcgggcgcga
      781 cagacagtct tccggctttc agatcacagc caagcggtgg atcgtggagc gcacgttcgg
      841 ctggcttggc atgagccgtc gcctcgtcaa ggactacgag cgcaaggtcc agaccagcga
      901 gacgcttatc gagttgacga tgatacgcct catactgcga cggctggtga ggcaagtttg
      961 acccttacga aaaaagctcc gaggcggtga cctgcacgga gcatccttta gttggctagc
     1021 gatgggagcc tgacgatgct cccgtcaatc ggctatagtc ggattctcta ctctggttgc
     1081 gtcgaccgga catcatccgc cgactggaaa ttggggatca tccgagccga gaacttcgat
     1141 ggtgaacccg ccaggggcgt gaaaatagaa ggtccaagag ccatgaaatc tgccggggga
     1201 ctttacctcg aatccatcat cctttagtcg ctgattgatc tcatcgacct tctcttcgct
     1261 ctcctgcgcg aagccgacgt ggaaggtccc cggatattcg acctttttgc cttccatcag
     1321 ggtgaggaac agcccgtcat cgtcggacag cgcggcgaag gagtcgccgc gcgtggccgc
     1381 gcaccgtagc ccgaagtatc tctccaagaa ctcccgggcc gccccgacgt cagtaaccgt
     1441 gagattgaga tggtttagtt tcatgctggt cttttgcctc ctctgagact tccactgcgg
     1501 aagtgatgga tcaaacgtca aaacctgccg acgagtccct atcttgctcg tcttgttcga
     1561 gtctctccct tagctggcgc agtaccatgg cggccgtccg catctgctcc aggtcgtgtt
     1621 gttttccaat ccggtttgcc catcgggcct gccgttgctg tatgtagtcg agtgcttgtt
     1681 ggcccttggg agtcatcgtc atgagcttgg cgcggcgatg gtgagggttg tctgtgtatc
     1741 gcaccagccc gtcggcggcc aggaggtcgg cggttctctg gacactctga cgggtgagcc
     1801 ccatcgtacg ggcgacctgg gcgaccgaag caggtccgcc ggcaaccacc cccaaaacct
     1861 gccagcgtgc gctggtctga cccacaggag ccgccatgct gtctcccgcg tcgatcaagc
     1921 gcccgttgag ccgaaagacc tctaggatta tctcgccaaa agcatcagca gcggtggtcg
     1981 gctcttccat acgacagtat actgacatat agacaggcgt ttgtcaaatc taagaattca
     2041 gtttcctaaa gaccgacaaa cttgcgtttc cagacaacat gctaagcccg tgaacacgtt
     2101 ttgatgctca tttaactggc ccgaccttca agtctgcaaa acaggctctt aggggcgggg
     2161 gggtgcacta ttcaccggca tgaacaggcg agtcttcttc tgggtctacg tggtctactt
     2221 cctgctgttc ttggtggctc tctacggcaa acaaatttgc tgggtcttat ccatcaactg
     2281 cggttgaggt catgaaagac ataatgga
//
LOCUS       DASQSL010002021         1688 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_109022, whole genome shotgun sequence.
ACCESSION   DASQSL010002021 DASQSL010000000
VERSION     DASQSL010002021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1688
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109022"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..869
                     /locus_tag="VE844_20340"
     CDS             <1..869
                     /locus_tag="VE844_20340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03608.1"
                     /translation="KVGERPYGIAVMQDGKTVAVGVEGEEKVKFLDAADFTLKGAVPI
                     GKMHNDHIVLTQDGKYLLVANYYSDDVLVIEAAAMQEAGRVKGCSAPHVVKYGPLKKN
                     AYVTCKKITGIAIINPTKKGLVQFHQLNVNPRSLTFSPDESKLYFGSFWVNGIFEMDT
                     ASGKVTRLLSAPPPKDNAGEQEVTYHGVEAVGGDIVLAANEGRSYVDAFDTKTGKHLA
                     RLTDVSYPCCIERVPGSEGFPTRLLVSNLGDGTLQLVEIAKDGTMRSLGKAKVAKAPK
                     RVAFVLPAAQSR"
     gene            883..>1688
                     /locus_tag="VE844_20345"
     CDS             883..>1688
                     /locus_tag="VE844_20345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008211462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1259 domain-containing protein"
                     /protein_id="HZC03609.1"
                     /translation="MKHPRCKVTLSLLVLIAGVTILAAEKRPEVVDGKNEAPAALDAE
                     RIGKAAGARASTTADGVVRVGWERTDVKVTVEGIPLKPFAGLGSWAAFEATLHGAILM
                     GDTVVFEDEITPAMDATFEAGLEVTALHNHFIFDEPKVYFMHIGGQANAENLATGVKR
                     VWDTIKEVRAKQPEPAKRIPGDVPLAGKIDASVIEKILKMKSEAQDGVVKVTIGREGM
                     MHGVKLSGSMGLTSWVAFSGSDRFAAVDGDFIMAAEEVQPVLRALRKAGT"
BASE COUNT          370 a          445 c          559 g          314 t
ORIGIN      
        1 acaaggtcgg cgagcgcccc tacgggattg cggttatgca ggatggcaag acggtcgccg
       61 ttggcgtgga gggggaggag aaggtcaagt tcctcgatgc ggcagacttt acgctcaaag
      121 gggcggtgcc gatcggcaag atgcataatg atcacatcgt cctgacgcag gacggcaaat
      181 acctgctggt cgcaaattac tacagcgatg acgtgctcgt catcgaggct gcagcaatgc
      241 aggaggcagg acgggtcaag gggtgcagcg ccccgcatgt cgtcaagtac gggccgctga
      301 agaagaatgc ttacgtgacc tgcaagaaga tcaccggcat cgctatcatc aatccgacta
      361 agaaggggct ggtccagttt caccagctca acgtcaaccc gcgcagcctc actttctcgc
      421 cggacgagtc gaagctctac ttcggctcat tctgggtcaa cggcatcttt gagatggaca
      481 cggcctcagg taaggtaacg cgcctgttgt cggcaccgcc cccgaaggac aacgccggcg
      541 agcaagaagt gacctaccat ggtgtggagg cggttggtgg cgatatcgtc ctagcggcca
      601 atgaaggccg ttcctatgtc gatgcatttg acacgaagac tggcaagcac ttggctcgcc
      661 ttactgacgt gtcatacccc tgttgcatcg agcgtgtccc aggatcggag ggcttcccta
      721 cccgcctgct ggtgagcaac cttggcgatg gcacgctgca gctagtagag atagcaaaag
      781 acggcacgat gagatcgctt ggcaaagcga aggtggccaa ggcacccaag cgggtagcat
      841 tcgtcctgcc ggcagcccag tcacgatgat caggaggagg tcatgaagca ccctcgctgc
      901 aaggtgacat tgagtttact ggttctgata gccggggtaa ccattcttgc ggctgaaaag
      961 cgacccgagg tggtagacgg caagaatgaa gccccggctg ccctggatgc ggagcgcatc
     1021 ggcaaggccg cgggtgccag ggcgagcacc acggccgacg gcgtagtccg cgtcgggtgg
     1081 gagcgcacgg acgtcaaagt cacagtggag gggatacccc tgaagccatt cgcagggctg
     1141 gggtcgtggg cagcgttcga ggcgacactg catggggcca tcctgatggg cgatacggtg
     1201 gtgttcgagg acgaaatcac ccccgccatg gatgcgacct ttgaggctgg gctagaggta
     1261 acagccctgc ataatcattt tatcttcgac gagccaaagg tctacttcat gcacattggc
     1321 gggcaggcta acgcggaaaa cctggctacc ggtgtcaagc gtgtctggga caccatcaag
     1381 gaggttcgag ccaagcagcc ggaaccggcg aagcgcattc ccggggatgt ccccctggca
     1441 ggtaagatcg atgcttccgt cattgaaaag atcttgaaaa tgaagagtga ggcgcaggac
     1501 ggtgtggtaa aggtaaccat cggccgcgag gggatgatgc acggggttaa gctcagtggg
     1561 tcgatggggt tgacttcttg ggtggctttc tccggtagcg acaggttcgc ggccgtcgat
     1621 ggcgacttta tcatggcggc tgaggaggtg cagccggtct tgcgcgctct gcgcaaggcg
     1681 ggcactca
//
LOCUS       DASQSL010002022         1343 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_82250, whole genome shotgun sequence.
ACCESSION   DASQSL010002022 DASQSL010000000
VERSION     DASQSL010002022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1343
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82250"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(271..1074)
                     /gene="istB"
                     /locus_tag="VE844_20350"
     CDS             complement(271..1074)
                     /gene="istB"
                     /locus_tag="VE844_20350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004071053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HZC03610.1"
                     /translation="MSTLELMLRELRLGTVVRHAQEVAIRAEREGWSFTRYLHNLVEM
                     ELLERGQRRTQKWLKDSGLPAGKTLTTLEVSRLPEPVRRQLPTLCEGHFVERAHNILA
                     FGLPGRGKTHLLCAIGQALIERGYRVLFMPVFKLVQRLLTAKQELRLEKELRRLDGYA
                     AVILDDIGYLQQNRDEMEVLFTFLAERYERKSVLISSNLVFSQWDRIFKDPMTTAAAI
                     DRLVHHATILELTGPSYRTDKAKEKVNEAKPTLTETNPTLEENTNAQSS"
     gene            complement(1071..>1343)
                     /locus_tag="VE844_20355"
     CDS             complement(1071..>1343)
                     /locus_tag="VE844_20355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HZC03611.1"
                     /translation="LTFRKVYERLQQAWPGTKGDAAYLRILHLAASTLESEVQVALEL
                     LLESGVLPTIDVVRDLVGPLPPESPVLPAPNVDLGSYDQLLEEVAR"
BASE COUNT          282 a          369 c          373 g          319 t
ORIGIN      
        1 accattatgc tggttcctat cagccacgaa gcagctgtag gggccgctct ttagtcaaaa
       61 tccagtaatt cgcttagaaa agattttttt gtcactagca gctcgcttgg agaaaattgt
      121 tcgtgggaag cgtgatatcc aataagcata actttctcct cctcgcatca tctatcataa
      181 ctgatcgcta gttcctgctc attgtcaact attttttaac atggatgaca attatttttt
      241 aacattgagc cggtcacctt tttcagctta ttaactgctt tgtgcgttgg tgttctcctc
      301 taaagtagga ttggtctcgg ttagggtggg tttggcttca ttgactttct ccttggcttt
      361 atcggtgcga taactggggc cggtcagctc caggatagta gcatgatgca ctagccggtc
      421 gatggcggcg gcggtggtca tggggtcttt gaagatgcgg tcccattggc tgaagacgag
      481 gttactgctg atcagtacgc tcttacgctc atagcgttcc gcgaggaagg taaacaatac
      541 ctccatctcg tcacggtttt gctggagata gccgatgtca tcgaggatga ccgcggcata
      601 gccatcgagg cgacgcaact ctttttccaa gcgcagttct tgcttggccg tgagcagccg
      661 ttgcaccagt ttgaagacgg gcataaagag gacccggtag ccccgttcga tgagggcctg
      721 gccgatggcg cagagcagat gggttttacc acgacccggc aagccaaagg cgaggatatt
      781 gtgggcccgc tcgacaaagt ggccctcgca gagagtaggg agttgtcggc gcacgggctc
      841 tggcaagcgg gacacctcca aggtggtcaa ggtcttgccg gcgggtaggc ccgagtcctt
      901 aagccatttt tgggtccggc gctgcccccg ctcaagcagt tccatctcga ctaaattatg
      961 cagataacga gtaaagctcc agccctcgcg ctccgcccgg atagcgactt cttgtgcgtg
     1021 gcgcaccacg gtacccaagc gcagctcccg taacatcagc tccagagtgc tcatcgggct
     1081 acctcctcca gcaactggtc atagctgccg aggtccacgt tgggcgccgg aagcaccggg
     1141 ctctcaggcg ggagcggccc aaccaagtcc cgcaccacat caatggtcgg taggaccccg
     1201 ctctccagca ggagctccag agctacctgc acctcactct ccagcgtgga ggcggctaaa
     1261 tgcaggatcc gcaagtaggc cgcatcgcct ttggtgcccg gccaggcctg ttgtaaccgc
     1321 tcatagacct tgcgaaaggt aag
//
LOCUS       DASQSL010002023         1085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_38879, whole genome shotgun sequence.
ACCESSION   DASQSL010002023 DASQSL010000000
VERSION     DASQSL010002023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38879"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            218..526
                     /locus_tag="VE844_20360"
     CDS             218..526
                     /locus_tag="VE844_20360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03612.1"
                     /translation="MNVLNEAGCMATGEALKRFDTDGSAILIGGVKWTSKGEEPNYYQ
                     TPYGEVEVLRHVYQTSAGGKTFCPLEREARIVVTLPRGLPRWFRINLRVAVRLRWKAT
                     "
     gene            511..>1085
                     /locus_tag="VE844_20365"
     CDS             511..>1085
                     /locus_tag="VE844_20365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ISKra4 family transposase"
                     /protein_id="HZC03613.1"
                     /translation="MESDLAENHGRRVARSYLQNLTEAVGSIVQAKEETWHYATPRLE
                     VPVQTVAIEMDGTCMLLCEEGYRLAMVGTIALYDRHGERHHTLYLGATPEYGQAPFLE
                     RMEREIAHVKQLYPHATYVGISDGTQSNWDFLERHTTVQILDFYHAAGYLAEVATVAR
                     PRSLPKRTEWLETRCHQLKHTPGAAAALLEE"
BASE COUNT          262 a          261 c          326 g          236 t
ORIGIN      
        1 ataagcccaa ttacttcgca aaattaacca cggattagta aatcatcgag agtatgacct
       61 ttaactaatg ttatttttat gaaagaatag taggcaaacg atctcatgta aggagtttgc
      121 catgtcagcg aaattaattg cagtcgaaag agacaccgtc aggatcgagc tgaatatcaa
      181 gctcagtcgc tcgtggcttt agagcgaaga aacgatcttg aatgtcctga atgaagcggg
      241 atgtatggcc acgggggaag ccttgaaacg ttttgacacc gatggttcag cgatcctgat
      301 cggaggggtg aaatggacct ccaaggggga ggagccgaac tattatcaaa ccccctatgg
      361 cgaagtcgaa gtgctgcgcc acgtgtatca gacgagcgcg gggggtaaga ccttctgtcc
      421 gctggagcgg gaagcgcgga tcgtggtaac tctaccccgc ggtttgccaa ggtggtttcg
      481 cataaatttg cgtgtggcgg ttcgactcag gtggaaagcg acctagccga gaatcacgga
      541 cggcgcgtgg cgcgttccta tttacagaat ctgacggagg cggtagggag tattgtacag
      601 gccaaggagg aaacctggca ctatgctacc ccgcgcttag aagtgcccgt ccagacggtg
      661 gccattgaga tggacgggac ctgtatgtta ctgtgtgaag aaggctatcg gctggcgatg
      721 gtaggaacga tcgcgctgta tgatcggcat ggcgagcggc atcataccct ttatcttgga
      781 gccacccccg aatatggaca agcccccttt ttggaacgga tggagcggga gatcgcgcat
      841 gtgaagcagc tctatcctca cgccacctac gtggggatct ccgatggcac gcagagcaat
      901 tgggattttt tggagcggca taccaccgtg cagatcctgg atttctatca tgccgcgggg
      961 tatcttgccg aggtggctac ggtggcccgt ccccgcagtt tgcccaagcg cactgagtgg
     1021 ttagagacgc gctgccatca gctcaagcac acccccggag ccgccgctgc gctgttagag
     1081 gaaat
//
LOCUS       DASQSL010002024         1398 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_201949, whole genome shotgun sequence.
ACCESSION   DASQSL010002024 DASQSL010000000
VERSION     DASQSL010002024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1398
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201949"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..624)
                     /locus_tag="VE844_20370"
     rRNA            complement(<1..624)
                     /locus_tag="VE844_20370"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            complement(927..>1398)
                     /locus_tag="VE844_20375"
     rRNA            complement(927..>1398)
                     /locus_tag="VE844_20375"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          299 a          490 c          326 g          283 t
ORIGIN      
        1 gctctgacgg cttgtaggca cacggtttca ggtactattt cactcccctc ccggggtact
       61 tttcatcttt ccctcacggt actagtccgc tatcggtcat cagggagtat ttaggcttac
      121 cgggtggtcc cggcagattc acagcaaatt ccacgagctc gctgctactc gggaacacga
      181 tccaaaccac gcgcagaatt ttcgtgtacg gggctctcac ccgctacggc gaccctttcc
      241 agaagtcttc cactaacccc acgccatggc ttcgcggacc cggcagagtc cacacgacaa
      301 cgtcccacaa caccccagcc gcaacgcctg ccggcttgac acgaccgagg tttagcctca
      361 tccgctttcg ctcgccacta ctcacggaat cacggttgtt ttctcttcct gtgggtactg
      421 agatgtttca cttccccacg ttccctccga cagcctatgt attcagctgc cggtgacacc
      481 ccatgacggg tgccgggttt ccccattcgg aaatcctcgg atcacagctc ggttgacagc
      541 tccccgaggc ctatcgcggc ctcccacgtc cttcatcggc tcctgatgcc tagacatcca
      601 ccatgtgccc ttaaacactt gttcacaaca agatgctcgc atccactatg caacactcaa
      661 cacacaacca caccccaacc cgcgccgacc accaccacgc ccaccacagg ggcgcgttag
      721 acgatccggg ccaggggcca gaagacacac ccccaacggg gtgtcccctc aggacccaac
      781 agtgtgccaa gcaattcatg aaccaggccc ttgtgttcca cccagcgcca caccccaacc
      841 aacagagcgc gacttcttag aagaaggaga accaggccca acacttcaag cactggccaa
      901 ccccaccaac acggtggact ccttagaaag gaggtgatcc agccgcacct tccggtacgg
      961 ctaccttgtt acgacttcgt cccaatcgcc ggtcccacct tcgacgactc cctcccacaa
     1021 ggggttaggc catcggcttc gggtgttacc aactttcatg acgtgacggg cggtgtgtac
     1081 aaggcccggg aacgtattca ccgcagcgtt gctgatctgc gattactagc gactccaact
     1141 tcacggggtc gagttgcaga ccccgatccg aactgagacc agctttaagg gattcgctcc
     1201 acctcgcggt ctcgcagccc tctgtatagg ccattgtagc atgtgtgaag ccctgggcat
     1261 aaggggcatg atgacttgac gtcatcccca ccttcctccg agttgacccc ggcagtctcc
     1321 catgagtccc cggcataacc cgctggcaac atggaacgag ggttgcgctc gttgcgggac
     1381 ttaacccaac atctcacg
//
LOCUS       DASQSL010002025         1617 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_174176, whole genome shotgun sequence.
ACCESSION   DASQSL010002025 DASQSL010000000
VERSION     DASQSL010002025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174176"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(74..1429)
                     /locus_tag="VE844_20380"
     CDS             complement(74..1429)
                     /locus_tag="VE844_20380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012119320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03614.1"
                     /translation="MLTLPAVLSPLMVEFAPLFSKPVWEHAQVLLVGAILAPGKRTVT
                     ACLRMMGLSQERGFVNYHRVLNRARWSPLAASHMLLRLLLTCFAPEGELVFGLDDTIE
                     PRRGEHITAKGIYRDPVRSSHSHFVKASGLRWLCCMVLTQVSWAGSTWGLPFLTVLCP
                     SERYHTERGRRHQKLTERARQIVRLLTRWLSDRQLIFVGDGGFAALELLHTVSQTSNA
                     HLITRLRLDAELWHPAPKRKPHQPGRPRVKGARRPSPKQRLDDPNTPWTTLEVERWYG
                     SEKREVESYTETCVWYKSGFQPVLIRWVLVRDPKGQYEPQAFLSTCVDHTPAQILSWF
                     VRRWRMEVTFEEARAHLGMETQRQWSDLAIARTTPVLLGLFSVVALMAERLIKRQVIA
                     VRTAAWYTKKLPTFADALAMTRRCLWKSCHFSTSSQSRDVVKVPRALLERLTDAVCYA
                     T"
BASE COUNT          363 a          484 c          432 g          338 t
ORIGIN      
        1 taccacggct atctctttac cgtgctcgcg ctgtttgtcg ttcgccctgt ggcctaagct
       61 cgactttggc cattcacgtg gcataacaga ccgcgtcagt taagcgctcc aacaaagcac
      121 gcgggacttt taccacatca cggctttgac tcgacgttga aaaatggcaa ctcttccaca
      181 aacaacgcct tgtcatcgcc agcgcatcgg caaaggtcgg cagttttttc gtataccagg
      241 cagctgtacg caccgctatg acttgacgtt tgatcaagcg ctccgccatc agcgctacca
      301 ccgagaacaa tcccaacaac accggtgtcg tgcgggcaat tgccaagtcg ctccattgtc
      361 tctgcgtttc catgcccaga tgcgcacgcg cttcctcgaa ggtgacttcc atgcgccaac
      421 gccgcacgaa ccagctcagg atttgtgcag gtgtgtggtc gacacacgtc gaaagaaagg
      481 cttgcggctc gtattggcct tttgggtcgc gcaccaagac ccagcgaatc aaaaccggtt
      541 ggaagccgga tttgtaccac acacaggttt ccgtgtagct ctcgacttcc cgcttctcgc
      601 tgccatacca gcgctcgact tccagagtcg tccacggggt gttgggatcg tccagacgtt
      661 gcttgggcga aggccggcgt gcccctttga cacgcggtcg tcccggttga tggggctttc
      721 gcttgggagc gggatgccac agctcggcat cgaggcgcaa gcgcgtgatc agatgagcgt
      781 tggatgtctg actcaccgtg tgaagcagct ctagggctgc aaaaccgccg tcaccgacaa
      841 agatcagctg gcgatctgac aaccagcggg tgagcaaccg cacgatttgc ctcgctcgct
      901 ccgtcaactt ttggtgcctc cgtccccgct cggtatgata gcgttcggaa ggacacaaga
      961 ccgtcaggaa cggcaagccc cacgtcgaac cggcccacga tacctgggtc agcaccatac
     1021 agcagagcca ccgcaagcca ctggctttga caaaatggct atgagaagaa cgcaccggat
     1081 cgcggtagat gcctttggcg gtgatgtgtt cgccgcgccg tggctcgatg gtgtcatcga
     1141 gtccaaagac caactcccct tcaggggcaa agcacgtgag caacagtcgc agcaacatgt
     1201 gactcgcagc caggggcgac cagcgcgccc gattcaggac ccggtgatag ttgacgaagc
     1261 ccctctcctg gctcaacccc atcatccgca agcatgccgt caccgtgcgt ttgccaggcg
     1321 cgagaatcgc gccaaccaac aagacctggg cgtgttccca cacgggcttg gaaaagagcg
     1381 gtgcaaactc taccatcaga ggcgacaaca cggcaggcag ggtcagcatg gaaaagattc
     1441 cttttggcga agaagttttt cctcagctta cgctgtctgc tggtgttttt tcaaaaacca
     1501 aaaatggcca aagtcgagct tatagacagt cagataatgt ttcgtgttta gacaccctga
     1561 gataccagta gttccgggat gttcgctacc caaaaccacg aatctttttc tgaaagt
//
LOCUS       DASQSL010002026         1673 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_164456, whole genome shotgun sequence.
ACCESSION   DASQSL010002026 DASQSL010000000
VERSION     DASQSL010002026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1673
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164456"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..667)
                     /gene="xth"
                     /locus_tag="VE844_20385"
     CDS             complement(<1..667)
                     /gene="xth"
                     /locus_tag="VE844_20385"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HZC03615.1"
                     /translation="MTMLRVATWNVNSLRIRLPQVLDWLAEAQPDLLALQETKLIDRD
                     FPAERFRALGYQSYYAGQKTYNGVAILSKRAAEGFVTDLPGFEDPQRRLLGARYGVLT
                     VVNVYVPNGAAIGSEKYGYKLRWLKHLQAYIGQLLTNGVPLVLLGDFNIAPEDRDVHD
                     PEVWEGHVLVSSAERASLRALLALGLKDTFRLFEQAPMRFSWWDYWAGSFRRNQGLRL
                     DLIL"
     gene            complement(680..>1673)
                     /locus_tag="VE844_20390"
     CDS             complement(680..>1673)
                     /locus_tag="VE844_20390"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011330260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HZC03616.1"
                     /translation="QEELRPYFPVPRVLRGLFAVAQRLYGLRIELQAGIEAWHPDVEF
                     YALYDAANSLRGLFYLDLYARPHKRGGAWMDECIVRKRSSTGIQHPVAYLTCNLTPPV
                     GEDPSLLTHKEVITLFHEFGHGLHHMLTLVDYPSVAGINGVPWDAVELPSQFMENWCW
                     EREALDLISAHYQTGEPISSTLLERMLAAKNFQSGMQMVRQLEFALFDFRLHSLPGTT
                     EGPAIQKLLDEVRAEVAVVKPPTFNRFQHSFGHIFAGGYAAGYYSYKWAEVLAADAFS
                     RFLECGIFDRESGVAFLHSILEPGGSRDPMELFTAFRGREPRIEPLLRHSGILA"
BASE COUNT          404 a          495 c          452 g          322 t
ORIGIN      
        1 ctaaaataag gtctagccta aggccctgat ttcggcgaaa gctccccgcc caataatccc
       61 accaagaaaa cctcatgggt gcttgttcaa agaggcgaaa cgtatccttg agcccgagcg
      121 ccaatagcgc tcgaagagag gcgcgctcag ccgagctcac caggacatgg ccctcccaga
      181 cttcgggatc gtgcacatcc cgatcctcag gggcgatatt gaaatcccct aacagcacga
      241 gcgggacgcc gttagtgagg agttggccga tatacgcctg cagatgctta agccagcgca
      301 atttatagcc gtatttttcg gatccgatcg ccgccccatt cgggacatag acattgacta
      361 cggttaaaac gccataacgc gcccccagta gccgccgttg cggatcctcg aagccgggca
      421 gatcggtaac gaagccctca gcggcacgtt tacttaagat agcgacaccg ttataggtct
      481 tttgaccggc ataataagac tgataaccca gcgcccgaaa gcgctccgcc gggaaatccc
      541 gatcgataag cttggtctcc tggagtgcca gcagatccgg ttgggcttcg gcgagccaat
      601 cgagcacctg cggcagacgg atgcgcagtg aattgacgtt ccaggtcgcc accctcagca
      661 tcgtcattta cgccccggct taagccagga tacccgagtg ccgcaacaag ggctcaatcc
      721 ggggttcgcg gccgcgaaat gccgtgaata attccatcgg atcccgcgat cctccgggtt
      781 cgaggatgga atgcaaaaaa gccaccccgc tctctcgatc aaagataccg cactccaaaa
      841 atctcgagaa ggcatcggcg gccaagacct ctgcccattt gtaactgtaa tagcctgccg
      901 catagccgcc ggcgaagata tggccgaaac tgtgctgaaa tcgattaaag gtcgggggtt
      961 tgactacggc aacctcggcc cgcacctcat ccaggagctt ttggatcgcg ggaccttctg
     1021 tagtccccgg taggctatgc aaacggaaat caaagagcgc gaactccagt tggcggacca
     1081 tctgcatccc ggattgaaag ttcttggccg cgagcatccg ctccagaagg gtactgctga
     1141 tcggctcgcc cgtctggtaa tgagcgctga tcagatccag cgcctcgcgc tcccagcacc
     1201 aattttccat aaactggctc ggtaactcaa cggcatccca gggcacgcca ttgatcccag
     1261 ctacactcgg atagtccact agggtcagca tatgatgcag accatgaccg aactcatgga
     1321 acagcgtgat cacttctttg tgggttaaaa gggagggatc ctcacctacg ggcggggtga
     1381 ggttacaggt aagataggcc acgggatgct gtatgcctgt gcttgagcgt ttgcggacga
     1441 tacactcatc catccaggcc ccgccgcgct tgtgggggcg cgcgtacaga tcaagataaa
     1501 ataggccgcg gaggctatta gccgcatcat agagggcata gaactccaca tcggggtgcc
     1561 aggcctctat ccctgcctgg agttcaattc ttaaaccata gaggcgttgg gctacagcga
     1621 acaaaccccg caatacgcgc ggcaccggaa agtaaggccg caactcctcc tgg
//
LOCUS       DASQSL010002027         1242 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_120103, whole genome shotgun sequence.
ACCESSION   DASQSL010002027 DASQSL010000000
VERSION     DASQSL010002027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1242
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120103"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            12..206
                     /locus_tag="VE844_20395"
     CDS             12..206
                     /locus_tag="VE844_20395"
                     /inference="COORDINATES: protein motif:HMM:NF024139.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC03617.1"
                     /translation="MISRIRSREREDLLTSKEVAAQLKVTPKMVLKLIKSGELRATRI
                     GRIILVSQFELTAFLDKHKA"
     gene            complement(357..1065)
                     /locus_tag="VE844_20400"
                     /pseudo
     CDS             complement(357..1065)
                     /locus_tag="VE844_20400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011142671.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
BASE COUNT          272 a          314 c          374 g          282 t
ORIGIN      
        1 ggggagagta aatgataagc cgtataagaa gcagagagag agaggattta ttaacctcga
       61 aagaggttgc agcacagcta aaagtaacac cgaagatggt attaaagtta attaagtctg
      121 gggagttacg ggcaacacga atcggcagga ttatcctggt gagtcagttc gagcttaccg
      181 cattcctcga taaacacaaa gcttagtggt ctttttccga aatcgtgcta tcttccctcc
      241 aataagctat tgtggaggga aacgtgtggc actcaaggta cgacggcact gtcaacgtgt
      301 tgcctggcag tatcagctcc tggcatgcgg gtgcatgaat ccctcgaccg tgagtcttat
      361 gcggcggttg ctatgctcgt gatttcctgc caggtgcgaa atcgttgccg catttgttgg
      421 cggtagacgg gagcaggcca gaggtggcgc cggggtcgga agtgttgcgc aatcggacca
      481 taggcggcga ggaaccgctg cgcgtgcccg gccgacttga agccctgcat gcgctgttcc
      541 cgctggtggg tggtgcgagt tttcggcccg attgttgagg taccggtgct gccgatgctc
      601 gacgctgggc aggatctccc gcttggccgc tccgtaactt ttgagcttat ccgtaatgat
      661 tacgcgaggt acgtacgtta atcccttgag gagcttgcgg aagaaggtct tcgccgcctg
      721 cttatcccgc tgtcgttgca ccaggatatc gagcccagtc ccgtcctggt cgacggcgcg
      781 ccagagatag cgccgttccc cgttagtcgt gaggaacatt ccgtccaggc gccatgtgtc
      841 ccccggtctg gggcgctggc gccggagctg gttggcgtac tgttggccaa atttccgaca
      901 ccacttccgg atcgactcat aggtgacgac aatgccacgg acaaagagca gctcttcgac
      961 atcccggtaa ctgaggcaga accggtagta cagccagacg ccgtggctga tgatctcggc
     1021 aggaaagcgg tggttcttat agcggttggt ggcgggtgtg ttcatgcgac gagtatggca
     1081 cattaggcag gttctggaca agccacgcga caagttgaca atgcctccac cttcctgtga
     1141 gttgaccctg tcgacaagca acacgttgac aatgcctcga agagtcctcg aataaaatat
     1201 ccgtgaaata ttcgagagca catgacccta tagcgtcgtg at
//
LOCUS       DASQSL010002028         2096 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_38946, whole genome shotgun sequence.
ACCESSION   DASQSL010002028 DASQSL010000000
VERSION     DASQSL010002028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2096
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38946"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..767)
                     /locus_tag="VE844_20405"
     CDS             complement(<1..767)
                     /locus_tag="VE844_20405"
                     /inference="COORDINATES: protein motif:HMM:NF014803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HZC03618.1"
                     /translation="MTETVALIAQPSDLPGSQRGIPEWTVEDAEDLYRVQAWGDSFFF
                     INEQGHVAVRPLPQQSLSIDLYDVIEDLRCRNVSFPVLIRFQDVLKARVVRLNKAFIK
                     AIRDAGYRNRYQGVYPIKVNQLHEVVEEVLEAGKPYGMGLECGSKAELIAALPHLEQD
                     GALLICNGYKDAVMLRLILASQQIGKQVIPVIEKYGEFEHLVRLGRDLSVRSRLGVRV
                     RLGTTGVGKWVESGGDQSKFGVSIPELITLVQRLKEE"
     gene            complement(821..1801)
                     /locus_tag="VE844_20410"
     CDS             complement(821..1801)
                     /locus_tag="VE844_20410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013014331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008612 - peptidyl-lysine modification to
                     peptidyl-hypusine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyhypusine synthase family protein"
                     /protein_id="HZC03619.1"
                     /translation="METRSIAEFIRHHFRHFNAAALADAAKGYIRHLECGGQMLITLA
                     GAMSTAELGLSLAEMIRRNKVHAICCTGANLEEDIFNLVAHEHYIRVPHYRDLTPQDE
                     QALLNRHLNRVTDTCIPEHEAIRRIEAAVLKEWTTADRQGERYFPHEFMYRIIRNGDL
                     KPYYQIDPKDSWLVAACERNLPIFVPGWEDSTLGNIYAAHCLQGDIKHVHTVRTGIEY
                     MMVLARWYQQTVKDHSIGFFQIGGGIAGDFPICVVPMLEQDLRVLDVPRWGYFCQISD
                     STTSYGSYSGAVPNEKITWGKLAIETPKYVIESDAAIVAPLIFAYVLARE"
     gene            complement(1903..>2096)
                     /locus_tag="VE844_20415"
     CDS             complement(1903..>2096)
                     /locus_tag="VE844_20415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012120339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004668 - protein-arginine deiminase
                     activity [Evidence IEA];
                     GO_process: GO:0009446 - putrescine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HZC03620.1"
                     /translation="YANFYIANRIVLLPCFNDPNDTLAAQILRSCFPNRRIIGIDCTD
                     LIGGLGAFHCLTQQIPAAA"
BASE COUNT          480 a          562 c          579 g          475 t
ORIGIN      
        1 ttttcctcct tcaggcgttg taccagggtg atcaattccg ggatagagac accgaatttg
       61 gattgatcac cccccgattc aacccactta cccacccccg tggtgccgag ccgcaccctg
      121 acacccaggc gagaccgcac actgagatcc cgaccgaggc gcacgaggtg ctcgaattct
      181 ccatattttt caatgaccgg gatgacttgc ttgccgatct gctggctggc caggatcagg
      241 cgaagcatga ctgcgtcctt gtagccgtta cagatcaaca gcgccccatc ctgctcgaga
      301 tggggcaggg cggcgatcaa ttcggctttg gagccgcatt cgagccccat gccataaggc
      361 ttacccgcct ccagcacttc ttcgacgact tcatgcagtt ggttcacctt gatgggatag
      421 acgccctgat agcgatttcg gtatcccgcg tcacggatag ccttgataaa ggccttgttg
      481 agtctcacga cgcgggcctt aagtacgtcc tgaaaccgga tcaagaccgg aaaggataca
      541 ttgcggcacc tgagatcctc gatgacatcg tacagatcga tcgagagtga ttgttggggc
      601 aaggggcgaa ccgccacatg tccttgttcg ttgataaaga agaatgaatc tccccacgcc
      661 tgaacgcgat agagatcctc ggcatcctct accgtccact cgggtatacc tctttgagat
      721 ccggggagat cggaaggctg ggcaattagg gctactgttt cagtcatgga cgtttaacct
      781 cagcaacagg gattttaccc atagtcttag gctattcacc ttattcacgg gcgagcacgt
      841 aggcaaagat caagggggcg acaatcgcgg catccgattc gatcacatat ttaggtgtct
      901 cgatggcaag cttgccccag gtgatcttct cattgggtac tgccccggag tacgagccat
      961 agcttgtggt cgaatcgctg atctggcaaa aatagcccca gcggggcacg tcgagcacgc
     1021 gcaaatcttg ttccagcatg ggcacgacac agatcgggaa atcgccagcg attcccccac
     1081 cgatctggaa gaagccgatg gaatgatcct tgacggtttg ttgataccac cgggcaagca
     1141 ccatcatgta ttcgataccc gtgcgcacgg tatggacatg cttgatatcg ccttggaggc
     1201 aatgggccgc gtagatattc cccagggtcg aatcttccca gccgggtaca aagatcggca
     1261 agttcctctc gcaggccgct accagccaac tatccttagg atcaatctga taatagggct
     1321 tgagatcccc gttgcggatg atccggtaca tgaactcatg aggaaaatat cgctctcctt
     1381 ggcgatcggc ggtggtccat tccttgagaa ccgctgcctc gatgcgccgt atggcttcgt
     1441 gttcgggaat gcaggtatcg gtgactcggt ttaagtgacg gttgagcaag gcctgttcgt
     1501 cttgaggcgt cagatcgcga tagtggggca cgcggatata gtgttcatgg gccaccagat
     1561 tgaagatgtc ttcttccagg ttagccccgg tacaacaaat agcatgcact ttatttcgtc
     1621 ggatcatctc cgcgagcgaa aggcccagct cggccgtgct catcgcgcct gccagcgtga
     1681 tcagcatctg ccccccacac tcgagatggc ggatatatcc cttggcggca tcggccaggg
     1741 ccgctgcatt gaagtgacgg aaatgatggc ggataaattc ggcgatcgag cgtgtttcca
     1801 tgcgcatttt ccctcctgat tggaatttaa agatacggga agattaggaa aatatcagcc
     1861 aaacagcaag cgatttatcg cttaccaggg acgtctatgt ttttaagcgg ctgccgggat
     1921 ctgttgggtc aggcagtgaa aggcgcccaa gcccccgatc agatcggtgc agtcgatccc
     1981 aatgatccgc cgatttggaa agcaggatcg caggatttgg gcggcgagcg tatcgttggg
     2041 gtcattgaaa caaggaagga gcacgatccg attggcgata tagaaattgg catagc
//
LOCUS       DASQSL010002029         1996 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_82356, whole genome shotgun sequence.
ACCESSION   DASQSL010002029 DASQSL010000000
VERSION     DASQSL010002029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1996
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82356"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1011)
                     /gene="hflK"
                     /locus_tag="VE844_20420"
     CDS             complement(<1..1011)
                     /gene="hflK"
                     /locus_tag="VE844_20420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005961350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HZC03621.1"
                     /translation="MVWNEPGGGRGKDPWEGRGGGGEPPDLDEVARKMKERFRGLFGG
                     GKGNGDKGGQFGLGILIALILLALLVWEMIYIIQPPERGVVLRFGAYVAILEPGLNFR
                     LPRPIESVEVINVDQIRSFEHRGTMLTQDENIVDVELAVQYRIKDAEDYTFNVFRPDA
                     TLAQTNESATRTIIGKSKLDFVLTEGRAQIASEIKELTQQVLDLYSAGVLITSVNMQP
                     AKPPEEVKSAFDDAIKAREDEQRLINEAEAYQNEITPKARGAAARITEDSHAYRSRVI
                     VQAQGEANRFQQLLVEYEKAPEVMRRRLYLEAMEAVLSSTPKVLLDAKGSNNLMYLPI
                     DKL"
     gene            complement(1060..>1996)
                     /gene="hflX"
                     /locus_tag="VE844_20425"
     CDS             complement(1060..>1996)
                     /gene="hflX"
                     /locus_tag="VE844_20425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010488367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HZC03622.1"
                     /translation="LQVDLAQLQHLSTRLVRGWTHLERQRGGIGLRGPGEMQLEADRR
                     LIGKRIQALNRRLEKVRRQRGQRRRARKRADLALVSLVGYTNAGKSTLFNRLTGAAVY
                     TADQLFATLDPTLRRIEVPGFGPVVLGDTVGFIRHLPHDLVAAFRATLEEIREVDLLL
                     HVIDRSSPHWSERVEQAAQVIAEIGAAEVPRIEVYNKIDRTCDNPKPRIQEDKEGRIR
                     QVWLSARGGEGLDLLIKAIGEHLSQDRRQHWLRLPATAGKMRAELYALGVVIEEATTH
                     NHNGAWMLKVAIARGRLEQLCQNAGLDYLSVAITD"
BASE COUNT          400 a          650 c          504 g          442 t
ORIGIN      
        1 cagcttatcg atcggtaaat acatgagatt attgctgccc ttcgcatcca atagcacctt
       61 gggggtactc gagagcaccg cttccatggc ctcaagataa agccgccggc gcataacttc
      121 cggggccttc tcgtattcta ccagcaactg ttgaaagcga ttcgcttcac cctgggcttg
      181 gacgatcacc cgggatcgat aggcatgcga atcttcagtg atacgcgccg ccgccccccg
      241 cgctttaggc gtgatctcat tttggtaggc ctcggcctcg ttgatcaaac gctgctcatc
      301 ttcccgggcc ttaatcgcat catcgaaagc gcttttgacc tcctcgggcg gcttggcagg
      361 ctgcatgttg acgctggtga tcaggacccc cgcgctataa agatccagga cctgttgggt
      421 cagttccttg atctcgcttg cgatctgggc gcgtccctcg gtcaggacaa aatccagctt
      481 gctcttgccg atgatggttc gggttgcgct ctcattggtc tgagccagcg tggcatcggg
      541 tctaaatacg ttgaaggtgt aatcctcggc atccttgatc cgatactgca cggccaactc
      601 gacgtcgacg atgttttcat cttgggtcag catggtccct cgatgttcaa aggagcggat
      661 ctgatcgaca ttgatcacct cgacagattc gatgggccgt ggaagcctga agttgagacc
      721 gggttccagt atcgccacat acgcgccgaa tctcagcacc accccccgct ccggcggctg
      781 gatgatgtag atcatctccc agacgagcaa ggccaaaagg ataagcgcta taagtatccc
      841 taacccgaac tggccgcctt tgtctccatt acccttacca cccccgaaca gcccccgaaa
      901 ccgctccttc atcttacggg cgacttcgtc gagatcggga ggttcacctc caccaccacg
      961 gccctcccat ggatcttttc cacggccgcc gcccggttca ttccatacca tcgaattcac
     1021 tcctgagaag taagttatct tttgagaatt ttacggggct taatctgtta tcgcaaccga
     1081 tagatagtcc aatcctgcat tctgacagag ttgctcaagc cgtccccggg caatcgctac
     1141 cttgagcatc caagcgccat tatgattatg cgtggtggct tcctctataa ccacgcccag
     1201 cgcataaagc tcagcccgca tctttccggc tgttgccggt agccgtagcc aatgctgccg
     1261 ccgatcctgg cttaaatgtt cgccaatcgc cttgatgagc aggtccaggc cctccccgcc
     1321 gcgggccgat agccatacct gccggatccg cccctcctta tcctcctgga tacgcggctt
     1381 gggattgtcg caggtcctat ctattttgtt gtaaacctcg atccgtggca cctcggctgc
     1441 cccgatctcc gcgatcacct gcgccgcctg ctcaacccgc tcactccaat gaggcgagct
     1501 cctatcgatc acatgcagca gcagatccac ctcacggatc tcctccaagg tcgcgcgaaa
     1561 agcggccacg aggtcatgcg gcagatgccg aatgaatccc accgtatcac cgagaacgac
     1621 cggtccaaag ccggggacct cgatcctgcg caaggtcgga tcgagcgttg caaagagctg
     1681 gtcagccgta tacacagcgg ccccggtcag gcggttgaac aaggtggact tgcccgcatt
     1741 ggtatagccg accaaggaca ccaaggccag atcggcgcgt tttcgggccc gccgtctttg
     1801 gccccgctgt ctacggacct tctccagccg ccgattgagc gcctggatac gcttaccgat
     1861 gagccgccgg tctgcctcga gctgcatctc acccggacct cttaaaccaa tacccccccg
     1921 ctgccgctcg agatgggtcc aaccccgcac caagcgggtc gatagatgct gcaactgcgc
     1981 cagatcgacc tgcagt
//
LOCUS       DASQSL010002030         1154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_202063, whole genome shotgun sequence.
ACCESSION   DASQSL010002030 DASQSL010000000
VERSION     DASQSL010002030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202063"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            234..>1154
                     /locus_tag="VE844_20430"
     CDS             234..>1154
                     /locus_tag="VE844_20430"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HZC03623.1"
                     /translation="MRRTVLLASVATAVLLTSGVVLATAIGSMRSGNTTAERPKAERP
                     NFVLVVTDDLTKQDYLDLGSALSSFTSKGTFFENAFVTTALCCPSRASTLTGLYAHNH
                     HITQHIDPGTGYEQYHAKGYDQKDLAVWLRDAGYKTGLVGKYMNKYDAQGDGVPAGWT
                     DWYGADSPIKRWRLNENGSIKTYPQDPTAPSYEHWENVLGDKATKFVGEAHTSGRPFF
                     LWYGTHAPHSPELVASQDKNRVGTWPAYNPLSFNEHDVSDKPQWIKHQSLLTSSQQRT
                     LKQKRQERLSSMLAVSRNLSRLKDKLSETGE"
BASE COUNT          271 a          342 c          321 g          220 t
ORIGIN      
        1 cagtccacat aagacaccga tgataccttc ggcaagtatc aagctccctt gtctgcccgg
       61 tccatagcac cgggacaaag gtacgttctc gaaagtagtg cagtggtgtg cgcgaagatg
      121 tgccgttggg tggatgcgac attcgcagcg gcagtctatt atccccgctg ttacgtaata
      181 gggcgtgggt ctaacctcat tattcccccg tctaacaaga agggtggagg gggatgagaa
      241 gaaccgttct gctggcctcg gtggcgacag cagtgctcct cacaagcggg gtggtgctgg
      301 ccacggcgat cggctcgatg agatcaggga acaccacggc tgaacggccc aaggctgaac
      361 ggcccaactt cgtcctcgtc gtcaccgacg accttaccaa gcaagactac ctagaccttg
      421 gcagcgctct gagctccttc acttccaaag gtacgttctt cgaaaacgct ttcgtgacca
      481 ccgctttgtg ctgcccttca cgagcgtcta cgctgaccgg gctttacgct cacaaccatc
      541 acataaccca gcacatagac cctggtaccg gctacgaaca gtatcatgcc aaagggtatg
      601 atcagaagga tcttgccgta tggctcaggg acgcgggcta caagacggga ctcgtcggca
      661 agtacatgaa caagtacgat gcacaaggcg atggggtacc tgcaggatgg accgactggt
      721 atggtgctga ctctcccatc aagcggtgga ggctcaatga gaatggaagc attaaaacct
      781 acccgcagga cccgactgcg ccgagttacg agcactggga gaacgtgctt ggggacaagg
      841 ctaccaagtt cgtcggggaa gcccacacct caggccggcc cttctttctc tggtacggta
      901 cccacgcccc gcactctcct gagcttgtcg cctcgcaaga taagaatagg gtggggacct
      961 ggccagcgta caacccgctc agcttcaatg agcatgatgt ctcagacaag ccgcagtgga
     1021 taaagcacca gtcgcttctc acctcatccc agcagcggac gctcaagcaa aagcgccagg
     1081 agcgcctgtc ctcgatgctc gccgtctcgc gcaacctctc gcggctaaag gataagctca
     1141 gcgagaccgg cgaa
//
LOCUS       DASQSL010002031         1120 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_120154, whole genome shotgun sequence.
ACCESSION   DASQSL010002031 DASQSL010000000
VERSION     DASQSL010002031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120154"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..151)
                     /locus_tag="VE844_20435"
     CDS             complement(<1..151)
                     /locus_tag="VE844_20435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012922745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HZC03624.1"
                     /translation="MKARRLHQPRRIVIVGGGFAGVAAARALRRCSAEVILIDRRNHH
                     IFQPLL"
     gene            448..>1120
                     /locus_tag="VE844_20440"
     CDS             448..>1120
                     /locus_tag="VE844_20440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03625.1"
                     /translation="MYIRKATRKYKDKLYTNHLLVESIHTPKGPRQKVICSLGDLSPR
                     PREAWLKLAHKMETALAGQTELFEVDPEVGGLLERARKQNHRPRRRDGTPPHTKNLDW
                     VTVETDGVEIEDPREAGPVQVGYAFWRRLGFDEVLAKVGFNQQTRTLTCAMALNRLVC
                     PGSEHAMPGWIRRTALEDILSVEFKTLTESALYRTLDRLHPERGRIESALCERERTLF
                     NLDQTI"
BASE COUNT          253 a          325 c          310 g          232 t
ORIGIN      
        1 acaagagagg ctggaaaatg tggtggtttc gtcgatcaat taggatgact tcggcactgc
       61 accgccgaag cgctcgcgcg gccgctactc cggcgaaccc tccaccgaca atcacaatgc
      121 gccgcggctg gtgaagtcgg cgcgccttaa tatcggacgc tgtctcgccc agctctgcct
      181 tgtccagtgc ctcactcact ctgtgtctcc cgtagtcgcg cgtcgccgcc ccagcgagca
      241 accaattttg ctcggaccct aacccaactt cgtcaccccc cctgtgattt ttgcccaatt
      301 ttgggggatt gaaggcagtt gccgaattgt aagttacaga tttttcagga attgccctca
      361 cgcaagtgca agagatcgct aaaatagtga ctaatagtac ataatatatc cattgactta
      421 ttggccttat taactactat agtggccatg tatatccgca aagccacgcg aaaatacaaa
      481 gacaagctct acaccaacca cctgctggtg gaatccatcc acacccccaa agggccccgg
      541 cagaaagtca tctgctcgct tggcgacctc tcaccccgcc ctcgtgaagc gtggctcaaa
      601 ctggctcata agatggagac ggcgttggcg ggacaaacgg agctatttga ggtggaccca
      661 gaggtggggg gcctgcttga acgggcacgc aaacagaacc accgcccacg ccgcagggat
      721 ggcaccccgc ctcacacgaa aaacctggac tgggtgaccg tggagactga cggggtggag
      781 atagaagatc cccgtgaggc cggaccggtc caggtgggtt atgcattttg gcggcgcttg
      841 ggattcgatg aagtcctggc caaggtgggg ttcaatcagc agacccgcac gctcacctgc
      901 gccatggctt taaaccgctt agtctgtcct ggttccgaac atgccatgcc agggtggatt
      961 cgtcgcaccg ctttggagga tatcctgagc gttgagttta agaccctcac cgagagcgcg
     1021 ctgtaccgca ccctggaccg attgcatccc gagcggggga ggattgaatc ggcgctgtgc
     1081 gagcgggaac ggacgctgtt taacctggat caaacgattt
//
LOCUS       DASQSL010002032         1010 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_120169, whole genome shotgun sequence.
ACCESSION   DASQSL010002032 DASQSL010000000
VERSION     DASQSL010002032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120169"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..224)
                     /locus_tag="VE844_20445"
     CDS             complement(<1..224)
                     /locus_tag="VE844_20445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03626.1"
                     /translation="MFVSEERKRCLGQVIQEKKLFACHLCNSKTFVIEDAFWPMMTPP
                     HVLNVNLNCADCGAGATVPLSSEDARRCGF"
     gene            complement(335..724)
                     /locus_tag="VE844_20450"
     CDS             complement(335..724)
                     /locus_tag="VE844_20450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03627.1"
                     /translation="MRTPLKTAVSVLFYIDAFIWFIGVIPTLYYASTHGALPTVVGIR
                     LMGGPFESLGIDALVVAGIVYVVVSALKGLAAYWLWHSRRDGAVLGLLLLGLSTIFWY
                     GFALPLGPLLGIAQLVLLMLVWRSLSL"
BASE COUNT          266 a          300 c          264 g          180 t
ORIGIN      
        1 ctaaatccgc agcgcctggc gtcttcggac gagagcggaa cagtggcccc cgcgccgcag
       61 tccgcacaat tcaggttgac attcagtacg tgcgggggtg tcatcattgg ccagaaggcg
      121 tcctcaatga caaaggtctt agagttgcag agatggcagg cgaacagctt cttctcctgt
      181 atcacctgtc ctaggcagcg cttccgttct tctgaaacaa acatgtccgg aggctaccat
      241 gctattcacc caacgtcggg gaacacttgt tctcgaaagt tcacatagcc ccggtcctat
      301 actgagtgag tactccggag ggtattacct ttcctcacaa actcagagac ctccagacaa
      361 gcatcaagag cacgagctga gcgatcccta acagtggtcc gaggggcagc gcaaagccat
      421 accagaagat tgtgctaagc cctaacagga gcagcccaag aaccgcaccg tccctcctgg
      481 aatgccatag ccagtacgcg gccaagccct tcaatgcgct gacaacgaca taaacgatcc
      541 ccgcgactac taaagcatcg atgccgagcg actcgaaagg cccgcccatc agccttatcc
      601 ccactacggt cggcaaggct ccatgagtgg atgcgtaata cagcgtagga atcacaccga
      661 tgaaccatat gaaagcgtcg atgtagaaca ggacggacac ggcggtttta aggggagtac
      721 gcataggctt tgcctccaag ctaggacagg ccatacgcct tacggccgca caagctccag
      781 gatacaggaa cgcgacgaag gccactaaaa caacacccgc ccaccacaac tagccgggga
      841 cctcttcttt gctccagcgc ctctattcac ccgagtgcct ggaaggggaa ttgacagaag
      901 ttcgtacttt cgaagagttc cgggctactc gaacggtcga acctcgaaag agagggcgta
      961 ccaaaaaccc gctgccagca ccgtgaaggt gccagcgata agggggtgga
//
LOCUS       DASQSL010002033         2966 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_82394, whole genome shotgun sequence.
ACCESSION   DASQSL010002033 DASQSL010000000
VERSION     DASQSL010002033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2966)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2966)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2966
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82394"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..245)
                     /locus_tag="VE844_20455"
     CDS             complement(<1..245)
                     /locus_tag="VE844_20455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006915365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fis family transcriptional regulator"
                     /protein_id="HZC03628.1"
                     /translation="MEPSVDRPSIDTETCPPVQQERRKQQPLSHYVKQSLNAYFKDLN
                     GHYPVKLYALVLEEIERPLFEVVMNHAQGKLSKAAQIL"
     gene            complement(259..1128)
                     /locus_tag="VE844_20460"
     CDS             complement(259..1128)
                     /locus_tag="VE844_20460"
                     /inference="COORDINATES: protein motif:HMM:NF023334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-ribbon and DUF3426 domain-containing
                     protein"
                     /protein_id="HZC03629.1"
                     /translation="MLMLTSCPYCNTVFRIRAPELKAAYGQVQCGTCTALFNALESLR
                     DEGLEAIPPGLLESQPPGPEPLEHPQGPSICNLEVITAELDMPVIPGSLDSPALIVPA
                     KGEDLVVETPTFMLEPSEEGSAHRAAEARGRRNRSLWANGALALVAGLAIQYAWFHGQ
                     ELLARYPELRPPLDTVCVLFGCQIPARQDLQAVRLLSRDVRPHPRYRDTLLVDATFMN
                     AADFSQPYPVLQLAFSDTSGNLLAARRFKPTEYLDKSINIQQGMPPRLPVHAVLELQW
                     LKQTPMSFEFKFL"
     gene            complement(1122..2060)
                     /gene="prmA"
                     /locus_tag="VE844_20465"
     CDS             complement(1122..2060)
                     /gene="prmA"
                     /locus_tag="VE844_20465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008939574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HZC03630.1"
                     /translation="MPWLQLRFTVDPERAECLSTILEREGARAVTLEAASDQAIFDGV
                     EGEAGFWEHTHVTALLDPGTEEIEPFLDSVALAFAPQPLPTCALSPLEDRDWTRTWMD
                     RFVPMRFGEKLWVHPSWIAPPDPEGINIMLDPGMAFGTGTHSTTALCLEWLANCRVLA
                     GARVVDYGCGSGILALAAAKLGARQVWAVDLDARALAVTCDNAAKNEVLDLIIPLLPE
                     HANPPQPVDIVIANILAGPLLELAPRFAKLTVIGGRVVLSGILAEQAEECLAAYAPWF
                     TMDQLERREEWCLLAGVRRHGVDCPPWCSAVSRGPC"
     gene            complement(2135..>2966)
                     /locus_tag="VE844_20470"
     CDS             complement(2135..>2966)
                     /locus_tag="VE844_20470"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020564209.1"
                     /note="an AccC homodimer forms the biotin carboxylase
                     subunit of the acetyl CoA carboxylase, an enzyme that
                     catalyzes the formation of malonyl-CoA, which in turn
                     controls the rate of fatty acid metabolism; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HZC03631.1"
                     /translation="VHSEAALSNAIDLMRTEAQAAFGNSAVYLEKFLERPRHIEFQVL
                     ADAYGNVVHLGERDCSTQRHHQKIIEEAPAPGITAAIRAEMGARCVRACQDIGYRGAG
                     TFEFLYENGCFYFIEMNTRVQVEHPVTEMITGIDIVREQIQIASGEKLTYRQEDIVIH
                     GHAIECRINAEDSRTFRPSPGTITLFHPPGGPGIRLDTHIYAGYQVPPYYDSMIGKLI
                     AHGGTRASALSRVIQALMEIVIDGINTNLQLHRDILDDAAFQAGGTDIHYLERKLGLA
                     "
BASE COUNT          631 a          862 c          829 g          644 t
ORIGIN      
        1 agtatttgcg ccgctttaga aagcttgcct tgggcatgat tcatcaccac ctcaaagagc
       61 ggccgctcga tctcctccag cacgagcgcg tatagcttca ccgggtaatg gccgttgagg
      121 tccttaaaat aggcattgag cgactgcttg acatagtggc tgagcggttg ctgcttgcgg
      181 cgctcctgct gcacgggcgg acaagtctct gtatcgatcg agggacggtc gacactcggc
      241 tccatggttc tttagcctct atagaaactt gaactcgaag ctcatcggtg tttgcttcag
      301 ccactgaagc tccaggacag catgcactgg caatctaggc ggcatgcctt gctgaatgtt
      361 gatacttttg tcgagatatt ctgtgggttt aaatcgcctg gctgccagta ggttgcccga
      421 ggtatcggag aatgcaagct gaagtaccgg atagggttga ctgaagtcgg ctgcattcat
      481 gaaggtcgca tcgaccagta aggtatcccg ataacgcgga tgtggccgta cgtcgcggga
      541 gagcaatcgc acagcctgca gatcttggcg ggcggggatc tggcatccaa ataagacaca
      601 caccgtgtct aatggagggc gtagctcggg ataccgagcc aataactcct gcccatggaa
      661 ccacgcatat tggatcgcaa gtccggccac caaggctaat gccccgttag cccagagcga
      721 tcggttccgg cgtcctcgag cttctgctgc tcggtgcgcg gatccctcct cgctcggttc
      781 gagcatgaat gtgggtgtct caaccacgag atcttcaccc tttgccggca ctatcaacgc
      841 gggcgagtcg agcgatcctg ggataacggg catatccaac tcagcggtaa tgacctccag
      901 gttgcagata gaaggaccct gtggatgctc caggggctct ggccctggcg gttgcgattc
      961 gaggagaccc ggggggatcg cttccaagcc ctcatcgcgc aggctttcga gggcattgaa
     1021 cagcgctgta catgttccac attgaacctg gccatacgcc gccttaagct caggcgcgcg
     1081 aatgcgaaat acggtgttgc agtagggaca gcttgtcaac atcagcatgg acctctcgat
     1141 acggcggagc accaaggcgg gcaatccaca ccgtgccgtc ggacaccggc gagtaaacac
     1201 cattcctctc tacgctccaa ttgatccata gtaaaccaag gcgcataagc agccaaacat
     1261 tcctctgcct gttctgcgag gatcccggat aataccacgc gcccgccgat gactgtcaat
     1321 ttcgcaaagc gcggggcaag ctcaagcaaa gggcctgcca ggatattggc aatgacgatg
     1381 tccaccggtt ggggaggatt cgcgtgctcg gggaggagcg gaatgatcag gtctaaaacc
     1441 tcatttttgg ccgcgttatc gcaggtcacc gccagcgcgc gcgcatcgag atccaccgcc
     1501 catacctgtc tagcaccgag cttcgctgcc gcaagcgcca aaatgccaga gccacagcca
     1561 tagtcgacca cccgtgcgcc tgccaaaacc cggcagtttg ccagccattc aaggcacagg
     1621 gctgtggttg aatgggtgcc tgtgccaaag gccatgccgg gatcgagcat gatatttatc
     1681 ccctctggat ccgggggcgc tatccagctc ggatgcaccc agagcttttc cccaaaccgc
     1741 attggcacga agcgatccat ccaagttcgc gtccaatccc gatcctcaag cgggctcaac
     1801 gcgcaggtgg gcaggggttg tggagcaaac gccagggcca cgctatcgag gaatggctcg
     1861 atctcctccg tgccgggatc caacagggcg gtgacgtgtg tgtgctccca aaaccctgct
     1921 tcaccctcga ctccgtcgaa gatcgcttga tcagaggcag cttccagggt tacagcacgt
     1981 gcgccctctc gttccaatat cgttgagaga cattcggcac gctcggggtc cacagtaaat
     2041 ctaagctgca accacggcat cgctattcat ggaagtctct aggggtgagg ggtgactcct
     2101 cactcctctc tcttcactcc tctctcctcc ctgttcaggc taggccgagt ttccgttcca
     2161 ggtaatggat atcggtccct ccggcctgga atgcggcatc gtccaatata tcgcgatgca
     2221 gttgaagatt ggtgttgatc ccatcgatga cgatctccat aagcgcctgg atcacccgac
     2281 tcagcgccga ggcccgtgtc cctccatggg cgatgagctt gccgatcata gagtcgtaat
     2341 agggtggcac ctggtaacct gcatagatgt gggtatccaa gcgaataccg ggacctcccg
     2401 gaggatggaa taaggtgatc gtgcctggcg atggcctgaa ggtcctagaa tcttcagcat
     2461 tgatccggca ctctattgca tggccgtgga tcacaatgtc ctcttgccga taggtgagct
     2521 tttcaccgct ggcgatctgg atctgttccc tgactatatc gatccccgtt atcatctcgg
     2581 tcacaggatg ctcgacctga acccgggtat tcatctctat gaaatagaaa cacccattct
     2641 cgtacaagaa ctcaaaggtg cccgcacccc ggtagccaat atcttggcag gctctcacac
     2701 agcgggcacc catctccgca cggatcgccg cggtgatgcc gggggcgggg gcttcttcga
     2761 tgatcttttg atggtggcgt tgggtagaac agtcgcgttc gcccagatga accacattgc
     2821 cgtacgcgtc ggccaggacc tggaattcga tgtgtcgagg tcgttccagg aatttctcca
     2881 gatacacggc gctattgcca aaagccgctt gcgcctcggt gcgcattagg tcgatcgcat
     2941 tcgacaatgc cgcttcactg tgcact
//
LOCUS       DASQSL010002034         1019 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_120200, whole genome shotgun sequence.
ACCESSION   DASQSL010002034 DASQSL010000000
VERSION     DASQSL010002034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120200"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            59..973
                     /locus_tag="VE844_20475"
     CDS             59..973
                     /locus_tag="VE844_20475"
                     /inference="COORDINATES: protein motif:HMM:NF017206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NmrA family NAD(P)-binding protein"
                     /protein_id="HZC03632.1"
                     /translation="MTQTRHSYTIMGATGHVGRVVAERLLKTGAQVRGIGRNSERLKG
                     LVDQGAIPYTGAFDDVEALQEAFKGADGVFAMIPPDHHAPDHLAFQDRIGSAIARALR
                     NARVEFVVSLNSIGAHLGEKTGPIRGLHNQEVRLNDIKDLNVIHLRPAYFMENLLWSI
                     PTIQSLGVNGSPLRGDLPIPMLATSDIGAKAAAFLADPEFHGHTAFEFFGPRPVTMQE
                     VTTILGQAIGKPHLKYVQFPYEEAEKAMVGGGMSPDSARLLIEMNRSFNDGFIRPTQP
                     MTPDQVGTTRIEEFAEIFAAAFRAVTRK"
BASE COUNT          237 a          273 c          300 g          209 t
ORIGIN      
        1 gtgaactagc caagcaagac attacattca aactgcacgt gcagcgaggt aaacaccgat
       61 gacacagaca agacacagct acacaatcat gggagcaacg ggccacgttg gaagggtggt
      121 cgccgaacgc ctcttgaaaa cgggcgctca ggtgcgtggg ataggacgca atagcgaacg
      181 cctgaaagga ctcgtagatc agggagccat cccctacacg ggcgcgttcg acgatgtgga
      241 ggcattgcaa gaggcgttca agggcgcgga cggtgtcttt gctatgatcc cgccggatca
      301 ccatgccccc gaccacttgg ccttccaaga tcggatcgga tcggccattg ctcgggcact
      361 ccgcaacgcg cgagtcgaat ttgtcgtaag tctcaacagc attggtgcgc acctcggcga
      421 gaaaactggc cctattcgcg gattgcacaa ccaagaagtg cgcctgaatg acataaagga
      481 tctcaatgtc atccatttgc gtcccgccta cttcatggag aatctcctct ggtcgattcc
      541 caccatccaa tctttggggg tgaatggctc tccgctgcga ggggatctgc cgatcccgat
      601 gttggccacc agcgacatcg gcgcaaaggc ggcggcgttt ctggccgatc cagagtttca
      661 tggacacacg gcctttgagt tctttggtcc ccggccggtc acgatgcagg aagtgacgac
      721 cattcttggt caggcgatcg ggaagccgca tttgaaatac gtgcagttcc cctatgagga
      781 ggcggaaaag gcgatggtgg gagggggtat gtcaccggac tctgcgcgtt tgctcattga
      841 aatgaatcga agcttcaacg acggtttcat tcggccgacg caacccatga ctccggatca
      901 ggtggggacg acccgcattg aggagttcgc cgagatattt gccgccgcgt tcagagcggt
      961 gacccggaaa tagagaacga attgatcgtt atcgtgtagg ctatatatgc tggctattc
//
LOCUS       DASQSL010002035         1072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_109224, whole genome shotgun sequence.
ACCESSION   DASQSL010002035 DASQSL010000000
VERSION     DASQSL010002035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109224"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(522..>1072)
                     /locus_tag="VE844_20480"
     CDS             complement(522..>1072)
                     /locus_tag="VE844_20480"
                     /inference="COORDINATES: protein motif:HMM:NF025107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC03633.1"
                     /translation="KVHDLILAGVPTEVIPTYCALADYSNNKTGLCWPRMETLARRLS
                     RSPRTIQRHLHLLKEKGLIEFVERRRDWHGRFGAYLYRLVHIVSATARKGEEAAGRKG
                     RRRKKHPTTGHGGPVASNKKQTKHQEVTPLPPKGDVKEGYQWLFDDSTSPEAELEHIR
                     EVQKKREEKAKRRRRGYEWFFE"
BASE COUNT          243 a          288 c          301 g          240 t
ORIGIN      
        1 cgcatcaggc ggggcagcat gagggacgat aaggacgaca aagggcgggt gtacgtatac
       61 ttagacctaa ccgatacgca ccctactgat gtacatgacg catcacagga cgccgtacat
      121 gacgcgtcgc gtaacgagtt aataacggag ctacgagacc gtgttcggtt cttggaggcc
      181 gaactgacgg atcgcaagga agagtccagg cgcaaggacc acatcatcgc ggccctaacg
      241 caacgtatcc cccagctgga gcctgcctca gagccacgag aacattcaga gaatcccacc
      301 gagcatctag atgataatag tactacaagt atcaaagagt ccagaagatt gaaaaggtta
      361 atacgggtac caagattgct gcgcaggcgg attaagggtt agaaacagcg aggcaagcga
      421 aaggcaagaa cacgcacgcc ctaaaccaag tctttagatg agaggctggc aagatggagc
      481 cgtaatagtt cgaagtattc actttatttt ctttctcgac cctactcgaa gaaccactcg
      541 tagccccttc gcctgcgttt ggccttctct tcgcgcttct tttgaacttc gcgtatgtgt
      601 tctagctctg cctctggaga tgtggagtca tcgaagagcc actgatagcc ttcttttacg
      661 tcccctttgg ggggtagggg ggtaacttct tgatgtttag tttgcttctt attagaggcc
      721 accggacccc catgtccggt ggtgggatgt ttctttcttc gccgtccttt gcgaccggcc
      781 gcctcttccc ccttccgagc tgtcgctgac actatgtgaa ccaatcggta gagataggct
      841 ccgaaccggc catgccagtc gcgcctgcgc tcgacgaact ctatgaggcc cttctccttc
      901 aagaggtgca ggtgacgctg gatcgtcctg gggcttcggg agagccttct agccagggtc
      961 tccatgcgag gccagcacag gccggtcttg ttgttggagt aatcggcgag ggcgcagtag
     1021 gtggggatca cctccgtagg cacccccgcc aggatcaggt cgtggacctt gg
//
LOCUS       DASQSL010002036         1238 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_54251, whole genome shotgun sequence.
ACCESSION   DASQSL010002036 DASQSL010000000
VERSION     DASQSL010002036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1238
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54251"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..194)
                     /locus_tag="VE844_20485"
     CDS             complement(<1..194)
                     /locus_tag="VE844_20485"
                     /EC_number="1.13.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008270638.1"
                     /note="catalyzes the oxidative ring opening of
                     3-hydroxyanthranilate to 2-amino-3-carboxymuconate
                     semialdehyde in the final enzymatic step of quinolinate
                     biosynthesis; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyanthranilate 3,4-dioxygenase"
                     /protein_id="HZC03634.1"
                     /translation="MHRLTPPIDFKKWIDAHREQLKPPVCNKQVFDGGDFIVMVVGGP
                     NSRKDYHVGEGPEFFYQLEG"
     gene            complement(216..635)
                     /locus_tag="VE844_20490"
     CDS             complement(216..635)
                     /locus_tag="VE844_20490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009582136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rid family hydrolase"
                     /protein_id="HZC03635.1"
                     /translation="MHKTLILSQHAPEPVGPYPHARRVGNLLFLSGIGPRKRGSRAIP
                     GVTLDAAGDVVDYDLEIQCRAVFENVRAVLEEAGSSWDKLVDVTVFLTNIKRDFDTYN
                     RVYAEYFTENGPCRTTVEVNGLPTPIAIEMKCIAMID"
     gene            complement(620..>1238)
                     /locus_tag="VE844_20495"
     CDS             complement(620..>1238)
                     /locus_tag="VE844_20495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011551042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HZC03636.1"
                     /translation="ANQGQLCLAGSRIFVERPIYERFKQEFITRAEALTVGDPLQAET
                     HQGALVSGAHLQKVLSYIELAQREGGTVLTGGYRVKVAGRCEGGYFVKPTVIEGLPHD
                     CRTNQEEIFGPVATLTPFEGEEEVLEYANSTEYGLAASVWSQDVQRCHRIAQGLESGV
                     VWINTWLLRDLRTPFGGMKHSGLGREGGIEALRFFTEAKNVCIKL"
BASE COUNT          238 a          387 c          351 g          262 t
ORIGIN      
        1 tccccttcga gctggtagaa gaactcgggc ccctcgccga catggtaatc cttgcggctg
       61 ttggggccac cgacgaccat cacgatgaag tcacccccat caaatacctg cttgttacag
      121 accgggggct tcaactgttc acggtgtgcg tcgatccatt tcttaaagtc gatcggtggg
      181 gtgagcctgt gcatggccgt gtctcctata gcggcttagt ctatcatggc gatacatttc
      241 atttcgattg caatcggtgt gggcaagccg ttgacctcga ccgtggttcg gcaggggccg
      301 ttctccgtga aatactccgc atagacccga ttgtaggtgt caaaatcacg cttgatattg
      361 gtcagaaata ccgtcacatc gaccaactta tcccaactcg agccggcctc ttccaggacg
      421 gctcggacgt tttcaaagac ggcacggcat tggatctcga gatcatagtc gacgacgtcg
      481 cccgctgcat ccaaggtcac gcccgggatc gcccggctcc cgcgcttgcg ggggccaatg
      541 ccggagagaa acagcaggtt cccgacccgg cgcgcatgcg gatagggccc gaccggctcg
      601 ggggcatgtt gggagaggat cagagtttta tgcacacgtt tttggcttcc gtaaaaaagc
      661 gcagtgcctc gatcccgcct tcgcgaccga ggcccgagtg tttcatgccg ccaaaggggg
      721 tgcgcagatc ccgcaatagc cacgtattga tccacaccac accgctttcg agcccttgag
      781 cgatccggtg gcagcgttgc acatcctggc tccagaccga ggcggccagg ccatactcgg
      841 tgctgttggc gtattcgagc acctcctctt ccccttcaaa cggcgtcaac gtggccacgg
      901 gaccgaagat ctcttcctga ttggtgcggc aatcgtgagg caagccctca atcacggtgg
      961 gcttgacaaa gtacccccct tcacagcgcc ccgctacctt cacgcggtac ccccccgtga
     1021 gcacggtgcc cccttcccgc tgcgcaagtt cgatgtagga gagcactttc tgtagatggg
     1081 ctccagacac aagcgccccc tggtgggtct ccgcttgcag tgggtccccc accgttaagg
     1141 cttccgctcg ggtgatgaat tcctgcttga agcgttcgta gatcggccgc tccacgaaga
     1201 tgcgcgaacc ggcaaggcac agttggccct gattggcg
//
LOCUS       DASQSL010002037         1044 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_164587, whole genome shotgun sequence.
ACCESSION   DASQSL010002037 DASQSL010000000
VERSION     DASQSL010002037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164587"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1044)
                     /locus_tag="VE844_20500"
     CDS             complement(<1..>1044)
                     /locus_tag="VE844_20500"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HZC03637.1"
                     /translation="QERWQSVSLHEALLPGDVVRTGPGNRVVVLLADGSQIKVNANSQ
                     LELKQVAPPVRKVGMEVLQTLLRLFSGEVWVRSYVEPFKIETKAAAATIRGTELNLAI
                     EPAEATRLTVVEGVVEFRNPQGSVFVAAKEQAIAKPGEAPRKVVIINPRDAVQWALYY
                     PPLIDYRQVIYPGGPDAQAIRRALEHYRRGALPETLRSLEQVPPEHRDARFFTLRAGL
                     LLSVSQVAEARADIEEALRRNSSEATAHALRSIITLVQNQKEEALSLARKAAELEPQS
                     PVPQVALSYAYQAVFDLEKALKSIEQAIRLAPEDALIHARLAELELSRGELERALKAA
                     RRAVALDPEFART"
BASE COUNT          190 a          344 c          302 g          208 t
ORIGIN      
        1 tgagtgcggg cgaactccgg atccagggcc accgcccttc gcgccgcctt gagcgcacgc
       61 tccagctccc cgcgggagag ctccagctcg gcaagcctcg catgaatgag cgcatcctcg
      121 ggggcgagcc tgatcgcttg ctcgatgctc ttgagggcct tctcaagatc aaagaccgcc
      181 tgatacgcat acgacaaggc gacttgaggt acaggtgatt ggggctcaag ctcggctgcc
      241 tttcttgcta agctcaaggc ctcctccttt tggttttgca ctaaggtgat aatcgagcgc
      301 agggcatggg cagtggcctc cgaagaattc cgccgcaagg cctcctcgat atcagcccga
      361 gcctccgcca cctgactgac cgagagtagc aaccctgcac gtaaggtgaa aaatcgtgca
      421 tcccggtgtt ccggaggcac ctgctcaagg ctccttaagg tctcggggag agcgcctcgg
      481 cgataatgct ccagcgccct gcggatggct tgggcatcgg gtccccccgg atagatgact
      541 tggcggtagt cgatgagcgg ggggtaatag agcgcccact gcaccgcatc gcgcggattg
      601 ataatgacca ccttgcgcgg ggcctcccca ggctttgcta tcgcctgctc cttggctgct
      661 acgaacacac tgccctgggg gttacggaac tccaccacgc cttcgaccac cgtgagtctc
      721 gtcgcctccg ccggttcgat ggctagattc aactccgtcc ctcggatggt ggcagcggct
      781 gccttggtct cgatcttaaa aggctccaca tagcttcgga cccagacctc cccactgaac
      841 aggcggagga gggtttgcag gacctccatc cccactttcc gcaccggggg tgccacctgt
      901 ttgagttcca gctggctgtt ggcattgacc ttgatctgcg acccatcggc aagcaggacc
      961 accacccggt tcccggggcc tgtcctcact acatccccag gcaaaagcgc ctcatgcagg
     1021 ctgacggact gccatcgctc ctgg
//
LOCUS       DASQSL010002038         3925 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_95000, whole genome shotgun sequence.
ACCESSION   DASQSL010002038 DASQSL010000000
VERSION     DASQSL010002038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3925)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3925)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3925
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95000"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..523
                     /locus_tag="VE844_20505"
     CDS             <1..523
                     /locus_tag="VE844_20505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03638.1"
                     /translation="RNKVKQRVAFKGRSEALHFAAILPAHRGEGGLYLVSIEAVHNQQ
                     DYQLIFSYRLARPEIQDFETKEAPQERMVLVEGIERVEFLYYGKQEKEDEARWHSRWK
                     DRNNLPQLVRLRLKTLSLVWPDLVIPIYAEVHREEQQLVMKAPRQSGADEGGGDLGEF
                     EDGDEDEDEGEDE"
     gene            533..1450
                     /locus_tag="VE844_20510"
     CDS             533..1450
                     /locus_tag="VE844_20510"
                     /inference="COORDINATES: protein motif:HMM:NF045433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03639.1"
                     /translation="MKTQSPTKMTGQPNRETGVALVLVLWVLTLLGIIATSFSKSMRT
                     ETELARQLTLSAQARALAEAGIYRGILDLLRFSRDPQAKWQANGTVYKVMKLGRGEIR
                     IAIQDEAGRVDLNTAQKPLIEGLLRGVGVDDQARAAIPDAIIDWRDPDNLRQLQGAED
                     EDYQAAGRSYGAKDGSFSCVEELQQVLGMTPALYRKLAPLLTVHSHRPNVDINLAPPA
                     LVQVLEASEAAQAGVEPTNLGAAASNRDLSRSDFSSPRGGLRSSGGSTFTLRAYAKVY
                     DTLAEIAATIKLGGDRDQPYSVIAWSEWK"
     gene            1477..2580
                     /locus_tag="VE844_20515"
     CDS             1477..2580
                     /locus_tag="VE844_20515"
                     /inference="COORDINATES: protein motif:HMM:NF022554.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HZC03640.1"
                     /translation="MQLLNSPITLQQIQRDLQGFFDWWQTELLTLVPERLRQATRFER
                     ERWILTLERDQIHASCPGRVDDPFTTRAQVNLEEDMEARSRIVSELKNRDPERSEIIV
                     RLPPTQVLSKVFTLPLMVEENLRQVIGFEMDQQTPFKADQVYYDFEVLKKNPTTQQLT
                     VRLTAVPRRYLDGILERLNTLGIPLDTIDVAETSFAINLLPPERRRPRKPTLQRLNLV
                     LGLLALLLLTATVAIPLMRKAEQEEHLQAEITAVQKEAASVSALRKQLDELTQQAGFL
                     VEAKMNAPVVIQVLDALTHLMPDGTWLYQFELNGKEVLMQGESPASSTLIGLLETSPL
                     FRNVTYRSPVTQNRVTGAERFNLSAEVVTGSDS"
     gene            2577..3179
                     /gene="gspM"
                     /locus_tag="VE844_20520"
     CDS             2577..3179
                     /gene="gspM"
                     /locus_tag="VE844_20520"
                     /inference="COORDINATES: protein motif:HMM:NF040576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspM"
                     /protein_id="HZC03641.1"
                     /translation="MIIERLNPKQQQLLAVGLMVLLLAAVYLIVVQPIVSMHQDYDGR
                     IGELHDRLAGYKKIASSRGALQKEFDRIKKQVTATQAGYLKSKTQALAGAELQDRVKR
                     VIESGGGRLTSIQILQPEDESKHKDTPPRVTIRVQMTGSIETVQKVLYKLESGQPRLF
                     IDNAYVRTRSAYIAGTNKPQNDQLDIRFNLYGFLQTAARS"
     gene            3189..3827
                     /locus_tag="VE844_20525"
     CDS             3189..3827
                     /locus_tag="VE844_20525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03642.1"
                     /translation="MRALILKYPLTAVLGFVCALLLAILVSELLFPPSPSVITPEASR
                     TPQSPLPVKKDDFSLPSLSQFQAIVERPLFLQSRRPIPGATTETSPTASKETRLNQYS
                     LTAVVIVPDKRLALLRSTTDKKIHKIEEGQDLQGWKLKEIKDESALFQQVNENQELRL
                     QRKTPPQFASNKQRPIATPPTAPDSAKKGQGKPRSAQESEEKPPSQPPQPAR"
BASE COUNT          936 a         1050 c         1116 g          823 t
ORIGIN      
        1 gagaaacaaa gtcaaacaac gcgtggcctt caagggtaga tccgaggcgc tccattttgc
       61 tgcgatcctg cctgctcacc gaggagaagg tgggctttat ctggtgtcga tagaggctgt
      121 tcataatcaa caggattacc agctgatctt ctcttaccgc ctggctcggc ccgagatcca
      181 ggattttgag acgaaagaag ctccccagga gcggatggtc ctggtagagg gcatagaaag
      241 ggtggagttt ttatattatg gtaagcaaga aaaagaggac gaagcgcgct ggcacagccg
      301 ctggaaggat cgtaataacc tgccccagct ggtacggctg aggttgaaaa ctctgtcttt
      361 ggtttggcca gatctggtga tccccatcta cgctgaggtc caccgcgagg aacaacaact
      421 ggtgatgaaa gcgccacggc aaagcggcgc cgatgagggg ggtggagatc tgggggagtt
      481 cgaggatggg gatgaggatg aggatgaggg tgaggacgag taggggaagc tcttgaagac
      541 tcaaagtcca actaaaatga cagggcagcc caaccgagaa accggtgtgg cgctcgtgct
      601 ggtattgtgg gtacttaccc tgcttgggat aatagccacg agcttttcca aaagtatgcg
      661 cacggagacg gaacttgcac ggcaactgac cctctcggcc caagcccgtg ccctggcaga
      721 ggccgggatc tatcgtggca ttctggatct gctcaggttt agtcgcgacc ctcaagcgaa
      781 gtggcaagca aatggtaccg tgtataaggt catgaagctc ggacgcggcg agatccgtat
      841 tgcgatccag gatgaagcgg gcagagtcga tctcaacacc gctcaaaagc cattgatcga
      901 gggactattg cgcggcgttg gtgtagacga tcaagcacgc gccgcgatcc ccgatgctat
      961 tatcgattgg cgggatcccg ataacctgcg ccagcttcag ggtgcggagg acgaagacta
     1021 tcaagcggcc ggccggagct atggcgctaa ggacggttcc tttagctgtg tggaggagct
     1081 ccagcaggtc ttggggatga cgccggcctt ataccggaag ctagcgcccc tattgacggt
     1141 tcattcccat cggccgaatg tggatatcaa tcttgcgcct ccggcgctgg tgcaggtgct
     1201 cgaggcctca gaggccgccc aggcgggggt cgagcccacc aatttaggcg cggcagcaag
     1261 caaccgggat ctatcacgat ccgatttcag ttcccctcgc ggtggtttga ggtcgagtgg
     1321 cggcagcacc ttcaccctac gggcatacgc caaggtgtat gatacgctcg ccgagatcgc
     1381 ggccaccatt aagctcggcg gcgaccgtga tcaaccgtat tcggtgatcg cgtggagcga
     1441 gtggaaataa agctttatac gttaactatc gatacaatgc aattgctaaa cagccctatt
     1501 acccttcagc agatccaacg cgatctccaa ggatttttcg actggtggca gacggagttg
     1561 ctcaccctgg tgccagagcg cctgcgccaa gctacccggt ttgaacgaga gcggtggatc
     1621 ctgacgctcg agcgtgatca gatccacgcc tcgtgtccag gcagggtaga cgatcctttt
     1681 accacgcgtg ctcaggttaa tctggaagaa gatatggaag cgcgttctag gatagtgtcg
     1741 gaattaaaga atagagaccc cgaacgatcc gagatcatcg tgcgcctacc gccgacacag
     1801 gtgctgagta aggtattcac cttacccctc atggttgagg aaaacctgcg ccaggtgata
     1861 ggatttgaaa tggatcagca gacacctttc aaagccgatc aggtctatta tgattttgag
     1921 gtcctcaaaa aaaaccccac cactcagcag ctcacggttc gtcttacagc cgtgccgcgc
     1981 aggtatttgg atgggatcct ggagcggctc aatacgcttg gtataccgct cgataccatc
     2041 gatgtcgcgg agacctcctt tgccatcaat ctgttgccgc ctgagcgccg gcggccacgt
     2101 aagcccaccc tgcagcgctt gaatctcgtg cttggcctcc tcgccttatt attgcttacg
     2161 gccaccgtgg cgataccgct gatgcgcaaa gcagagcagg aggaacactt gcaagccgag
     2221 atcacggccg tacaaaaaga ggcggcttcg gtaagcgcgc tccgcaagca gttagacgaa
     2281 ctcacccaac aggcgggttt tcttgtcgag gccaagatga atgcaccggt ggttatccag
     2341 gtgctcgacg cactgaccca cctcatgcca gatggcacct ggttgtatca atttgaactc
     2401 aatggcaaag aggtgctgat gcagggtgaa tcccccgctt catcgacctt gatcggcctg
     2461 cttgagacct ccccattatt tcgcaacgtg acttaccgct cgcccgtgac ccagaatcgg
     2521 gttaccgggg ctgagcgttt caatctctct gcagaagtag tgacgggctc ggactcatga
     2581 tcatcgagcg gctaaatcct aaacagcagc agctactggc cgtaggcttg atggttttac
     2641 tgctcgctgc cgtttattta attgtggtgc agcccatcgt ctcgatgcat caggactatg
     2701 acgggcggat cggcgaattg cacgatcgtt tggcgggtta taaaaagatc gccagcagtc
     2761 ggggggcctt gcaaaaggag ttcgatcgga ttaaaaagca agtgaccgcg acccaggccg
     2821 gttatctcaa gagcaaaacc caggctttgg caggggcgga gctccaggac cgggtcaaac
     2881 gggtgatcga gtcgggtggt ggacgtttaa ccagtatcca gatcctgcag cctgaagatg
     2941 aaagcaagca caaggatacc ccgccccggg tcaccatccg ggtgcagatg acgggatcga
     3001 ttgaaaccgt acaaaaggtg ttatacaaac tcgagtcggg gcaaccgcgc ctgttcatcg
     3061 ataatgccta tgtgcggacc agaagcgctt atattgccgg gactaataaa ccgcaaaacg
     3121 atcaattgga tattcgcttt aatctctatg gctttctgca gacagcagca cgctcataac
     3181 gatctcgcat gagagcgctc attttaaaat atcccctgac cgcagtcctg ggtttcgtgt
     3241 gcgctctatt gctggctatt ctggtcagtg aattactgtt cccgccttca ccttcggtga
     3301 tcacgcccga ggcatcgcgg acgcctcaat cccctttgcc ggtgaaaaag gatgattttt
     3361 ccctgccctc gctcagtcaa ttccaggcga tcgtagaacg gccgttattt ctgcaaagcc
     3421 gccgccctat accgggcgct acgactgaaa cctcgccaac tgcctctaag gaaacgcgcc
     3481 tgaatcagta tagcctgacg gcagtggtta tcgtcccaga caaacggctt gccttattgc
     3541 gcagcaccac cgataaaaag atccataaga tcgaggaagg acaggatctt caagggtgga
     3601 aattaaagga gatcaaagac gagtccgccc tgtttcaaca ggtgaacgag aaccaagagc
     3661 tgcggttgca gcgtaaaacg cccccgcaat ttgcttctaa caagcagcgt cctatagcca
     3721 ccccgccgac cgcgccggac tcggccaaga aaggtcaagg caagcctcgc tctgcccaag
     3781 aaagcgagga gaaaccccct tcccaaccgc cacaacccgc acgttgagtg gctcgcgcct
     3841 ggaaataagc aggcggcttt agaatgcgtc tgcggaataa tgggtgtgtc ccacttgatc
     3901 taagtcgtag tagccggttg tgtgg
//
LOCUS       DASQSL010002039         2717 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_120289, whole genome shotgun sequence.
ACCESSION   DASQSL010002039 DASQSL010000000
VERSION     DASQSL010002039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2717
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120289"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1702
                     /locus_tag="VE844_20530"
     CDS             <1..1702
                     /locus_tag="VE844_20530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010873796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015103 - inorganic anion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HZC03643.1"
                     /translation="PAGGRKGFNIMQLIHGLHFKNLHGDIYGGLVAAVVALPLALAFG
                     VASGAGAIAGLYGAIFVGFFAALFGGTPAQVSGPTGPMTVVMANVLLQFAHEPRMAFT
                     TVILSGCLQIVIGLLGWGKYIRLTPYPVISGFMSGVGCIIIILQLGPLIGHASRPEGV
                     VATLGALPEFYANPNWQAVIAGALSLAVIYLTPARITRIIPGTLLALLVITPIAVFFL
                     PNAPTIGDVPKGFPTPITPFIERDSLRLVLEQAVILCLLGNIDSLLTSLIHDNLTRSH
                     HDSNRECVGQGIGNMVSGFFGGLPGAGATMRTVANIRTGGRTPLSGALHALVLLAILL
                     WLGPLASQIPLPALAGILLKVGVDIIDWRFMTHVLRAPRTEVLIMILVLLLTVLVDLI
                     MAVAVGVVVASLLFVKRMADLELASFRVITVPHEDALLSPEETEILAQNQGSIVLIHV
                     DGPMSFGSANNMVRRLDRVKEFSTFRSVVLDLSDVPLIDGTAAMAVEDMLRVTHAYRQ
                     HLFFVGMQPQVAEVLEGMGMFRLIRPGYQYATRLEALHAAAQVNEQPEQKAVPAGSVA
                     "
     gene            1725..2357
                     /gene="can"
                     /locus_tag="VE844_20535"
     CDS             1725..2357
                     /gene="can"
                     /locus_tag="VE844_20535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008236613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004089 - carbonate dehydratase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0015976 - carbon utilization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbonate dehydratase"
                     /protein_id="HZC03644.1"
                     /translation="MKSYEKLLLSNNRKWATETVRADPEFFNRLAEIQRPEFLWIGCS
                     DSRVPAERITLTQPGEIFVHRNIANVVVATDLNMLSVLQYAVEALKIKHIILCGHYGC
                     GGVRAAMDHQYLGLINQWLCHIKDVYRDHHKELEEIRDLDKRADRLVELNVIAQAYNL
                     VKTSVVQNAWRIGEFPIIHGWVYSLRDGLLHELISIDRASQYDLIYKLKF"
BASE COUNT          507 a          805 c          778 g          627 t
ORIGIN      
        1 tcctgctggt ggacggaagg ggtttaacat tatgcaattg attcacgggc tgcacttcaa
       61 aaaccttcat ggtgacatct atggcgggct ggtggcggcg gtggtggccc tgcctctggc
      121 gctggccttt ggggtcgcct caggtgccgg ggccatcgcc gggctctacg gggctatctt
      181 cgtgggcttc tttgccgctc tcttcggcgg caccccggca caggtctccg gccccaccgg
      241 ccccatgacc gtggtcatgg ccaacgtgct cttacagttc gctcatgagc cgcgcatggc
      301 cttcaccacc gtgattctga gtggttgcct gcagatcgtc atcggtcttc tgggctgggg
      361 gaagtatatt cgcctcaccc cctatccggt catctcgggc ttcatgagcg gggtcggctg
      421 catcatcatc atcctgcagt tggggccctt gattggccat gcctccaggc cggagggggt
      481 ggtggccacc cttggggccc tccccgagtt ttatgcaaac cccaattggc aggcggtcat
      541 tgccggtgca ctgtctctgg ccgtcattta tctcacaccc gcacgtatca ccaggattat
      601 cccggggacc ctgctcgccc ttcttgtcat cacccctatc gccgtctttt tcttgcccaa
      661 tgcgcccacc atcggggatg tgcctaaggg atttcccact cccatcacgc ccttcatcga
      721 gcgggattcc cttagactgg tcctagagca ggcggtgatt ctttgcctgc tcggcaacat
      781 cgacagcctc ctcacctccc ttatccatga taatctcacc cgcagccacc acgactcaaa
      841 ccgcgagtgc gtggggcagg gcatcggcaa catggtctcg gggttcttcg gcgggctgcc
      901 gggggcaggg gccaccatgc gcacggtagc caacatccgt accggtgggc gcacccccct
      961 ctccggggca ctgcatgcgc tggtgctgct cgccatcctg ctgtggctag ggccactggc
     1021 ctctcagatc ccgctgcccg cactcgccgg catcctcctc aaggtggggg tggatatcat
     1081 cgactggcgc ttcatgaccc atgtgctcag ggccccacgc actgaggtcc tcatcatgat
     1141 cctagtgctc cttctcactg tgcttgtgga cctcattatg gcggtggctg tgggcgtggt
     1201 ggtggcgagc ttgctttttg taaagcgtat ggcggatctc gagctcgcca gcttccgcgt
     1261 catcactgtc ccccacgagg atgcgctcct ctcgccggag gagaccgaaa tcctcgccca
     1321 gaaccaaggt agcatcgtgc tcatccacgt ggacggtccc atgagctttg gctcagccaa
     1381 taacatggta cggcgcctgg accgggtcaa ggagttcagt accttccgga gtgtggtgct
     1441 ggacctctcg gatgtgcccc taatcgacgg gaccgccgct atggcggtgg aggacatgct
     1501 gcgcgtaacc catgcctatc ggcagcacct cttttttgta ggcatgcagc cccaggtggc
     1561 cgaggtgctg gagggcatgg ggatgttcag gctcatccgg ccgggttatc agtacgccac
     1621 tcgcctggag gccttgcacg cggcggcgca ggtgaatgag cagcctgaac agaaggcggt
     1681 accggcgggt tcagtagctt gagggatctg gaggcaggcg taccatgaaa tcttacgaga
     1741 agttattact ttccaacaac cgcaaatggg ctaccgaaac cgtacgggca gatcctgagt
     1801 ttttcaatcg gcttgcagag atccaaaggc cggaattcct ttggatcggc tgctccgaca
     1861 gtcgggtccc cgccgaacgg atcaccttaa ctcagcccgg cgagatcttc gtccaccgca
     1921 acatcgccaa tgtggttgtg gcgaccgatc tcaacatgct gagcgtgctg caatatgccg
     1981 tggaagcact taaaatcaag catatcatcc tctgcggcca ttacggctgc ggcggggtgc
     2041 gggcggcgat ggaccatcag tatctcgggc tcatcaatca atggctgtgt cacatcaagg
     2101 acgtgtaccg ggaccatcac aaagagctgg aggaaatcag agaccttgac aagcgggcgg
     2161 accgccttgt tgagcttaac gtcatcgctc aggcctacaa tctggtcaag acctccgttg
     2221 tccaaaacgc ctggcgcata ggagagtttc cgatcatcca tgggtgggtt tatagcttga
     2281 gggatggctt actgcacgag ctcatttcga tcgatcgggc gtcccagtat gatttgattt
     2341 ataagttgaa attctgagcg gacggccgct tggaagcaaa gatacactag ccaaatagcg
     2401 ccttgagctt ttccctcgga tcaggggcag ggctgttcaa tgctagagcc cgtcataagc
     2461 cagtacccta tccaggctaa gtgcattgtc gtacaagcct agtacaagct caactttctt
     2521 tagtcggata agaggtgtct cctgaccatg tgtacccggt gtttcggtat gcgttccaag
     2581 gactggacct ggagggatct cattattgct cccataccaa taagtcattg atttttaaaa
     2641 gctgcatcgg tttgtgggga ctatccgcaa gcagttccct gtgaccgtcg tcttcatcgt
     2701 aaagggacac cagattc
//
LOCUS       DASQSL010002040         1733 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_174355, whole genome shotgun sequence.
ACCESSION   DASQSL010002040 DASQSL010000000
VERSION     DASQSL010002040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1733
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174355"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(22..381)
                     /locus_tag="VE844_20540"
     CDS             complement(22..381)
                     /locus_tag="VE844_20540"
                     /inference="COORDINATES: protein motif:HMM:NF022639.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2782 domain-containing protein"
                     /protein_id="HZC03645.1"
                     /translation="MRGINKPTQIALGMSVAGLLCAAEPEVPQGLESLSDVPELSARV
                     QSGEALEPPDVRIVPKKDVTIEEYRIRGRLYMIKVIPVKGPPYYFLDPDGDYRMETKM
                     SEIYSDFVVPSWVLFSW"
     gene            754..1733
                     /locus_tag="VE844_20545"
                     /pseudo
     CDS             754..1733
                     /locus_tag="VE844_20545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012585584.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
BASE COUNT          380 a          506 c          485 g          362 t
ORIGIN      
        1 ggctgcagga aggtctatcc cctaccagct aaacaggacc cagcttggga ctacaaagtc
       61 cgagtagatc tcactcatct tggtctccat ccggtaatcg ccatctgggt ccagaaaata
      121 atagggtggc ccttttaccg ggatcacttt aatcatataa agacggccac ggatacggta
      181 ctcttcgatt gttacatctt ttttaggaac aatcctgaca tcggggggtt ctagagcttc
      241 tccactttgt acccgtgccg atagctcagg cacatcggac agagattcca gtccttgggg
      301 gacctcgggt tcagcggcgc acaaaaggcc cgccacactc ataccgagtg cgatctgagt
      361 cggtttattt attccacgca tgataagtta gtctctcacg atttaacagg ttttttaggc
      421 ccagggatgt ttggcccgct cgctagccgg aaagtattcg gtgttgagat ggcctatacc
      481 ttctccatca gcaatcctcg ttccaacccg gctccaaccg tgcagaagtc agccaaatcg
      541 ctgaaactga aaaggtttta cgctttggcc agagtggatg tttgctggag agacgaggcg
      601 gtgccgaagc cgctctgctg acatatcggc agatgccgag atatcggtgt aaagcatcca
      661 tccctggatt cctcgctcct caaagatggg tccatccctg gaccctcccc gcgtgccctc
      721 ccccggggtc aaggggaggg tgagggaggg ggtgtcttct ataggcatgt gccggcccgt
      781 agactacacc tcactggcga ggacacacta gtggccaccg tgtttgatct ccaggtcgcg
      841 cagtacggcg tagatcaagg gctcggtggc gagcatgtcg ccacgagcta cgatgacgcc
      901 catgtgcctt gtacgcccgc ctggactgaa gggatcaccg gcgttaaacg tgccgacatc
      961 atccgtactg cgcgggaatt cgccgacaac gccgcgaaga ccttgggtaa atccatggtg
     1021 attctggggg ccgggatcaa ccactggtac cacaacgaca tgacctaccg atccatcatg
     1081 aacctcctgc acctctgcgg ctgcgtgggg cagagcggcg ggggctgggc gcactacgtc
     1141 gggcaggaaa agctccgtcc tcaggcgggc tgggcaccca tcgcctttgc cctggactgg
     1201 caccggccag cgcgccagat gaacggcacg agtttctggt atttccacac cgatcaatgg
     1261 cgctatgaga aactctccgc cgacgaactt ctcgccgcta cagccaaggg tcattaccgc
     1321 ggccatacgc tcgccgacta caacgtggtc tcacaaaggc tcggctggct gccctcggcg
     1381 ccgcacttca atcgtaatcc ccttgagatc tgtgcgcagg cagaggccaa aggcgcgcaa
     1441 accgagcagg agatcgccaa ctacctcgta ggcaaactta aaaccggcga gatcaatttc
     1501 gctgccgagg atatcgatgc cccggagaac ttccctcgca atctcttcgt ctggcgtgcg
     1561 aatctcttag ggaccagcgc caagggtcat gaatatttcc tgaaacacct gctcggggcc
     1621 cagaacgggg tcatgcagga ggtgatggag gaggccgaag gccaagaggt ccagtggcat
     1681 gatgaggcgc ccatcggcaa gctcgatctt atggtcgata tcaacttccg gct
//
LOCUS       DASQSL010002041         3604 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_95016, whole genome shotgun sequence.
ACCESSION   DASQSL010002041 DASQSL010000000
VERSION     DASQSL010002041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3604)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3604
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95016"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            116..922
                     /gene="trpA"
                     /locus_tag="VE844_20550"
     CDS             116..922
                     /gene="trpA"
                     /locus_tag="VE844_20550"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002808920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HZC03646.1"
                     /translation="MSRITACFEGLRKQRRKALIPFITAGDPQPAYTVPLMHALVEGG
                     ADIIELGVPFSDPMADGPVIQRSSERALVHGVSLHDVLALVKAFREKDPITPVVLMGY
                     LNPIERMGYEGFAREAGYAGVDGVLVVDLPPEEAGDLLDALRAHALDPVFLLAPTTSD
                     PRIERICQVACGFVYYVSLKGVTGSDKLDINAVKARIERIRPHTHLPIGVGFGIKDAE
                     SAARIASVSDAVVVGSALVERIGLLAEQPEMLGDEVKSFVRALRQAVDAA"
     gene            983..1870
                     /gene="accD"
                     /locus_tag="VE844_20555"
     CDS             983..1870
                     /gene="accD"
                     /locus_tag="VE844_20555"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012970806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HZC03647.1"
                     /translation="MASENTWSMNNWFKKLLPSRIQTNGTAKRAVPEGLWTNCSGCKA
                     VLYRAELERNLNVCPKCGHHMRIGARERLDHFLDPEPREEIGSGIEPIDFLRFKDTKR
                     YKERLSQAQKATAELDALVVMKGCVKSVPLVACAFEFEFMGGSMGSVVGERFVRAVNA
                     CLEYEIPLVCFSASGGARMQEALVSLMQMAKTSAGLAALNRRGIPYISVLTDPTMGGV
                     SASLAMLGDINIAEPNALIGFAGPRVIEQTVRQTLPEGFQRSEFLLQHGTIDMISDRR
                     SLRDRIASMMALLSHRPLA"
     gene            1921..3225
                     /gene="folC"
                     /locus_tag="VE844_20560"
     CDS             1921..3225
                     /gene="folC"
                     /locus_tag="VE844_20560"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013220933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004326 - tetrahydrofolylpolyglutamate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HZC03648.1"
                     /translation="MAPLPLRRRFKRLSEWLAWQETLHIKEIELGLERCKEVAERIGL
                     RTPTYQVVTVGGTNGKGSSVAMLDSILRAAGYKVAMYTSPHLLRYNERLCIGGVPVSD
                     EQLCQAFQRVDEARGSIVLTYFEFGTLAALDILQRTAIDLAVLEVGLGGRLDAVNMID
                     PDVALIATIGIDHVEWLGQDRAAIAREKAGIFRAGRPAVCSDPNPPWTLTDQAEQMGS
                     RLYLLGRDYTFEVAGETWSWHSGPTSYKHLPRPGLCGDHQFQNAAGVLMVVYTLAERL
                     RVDQQAIRRGLAGVKLAGRFQVIPGPVEYILDVAHNPQATGILAQILRQRRAKGRTHI
                     LIGMLKDKDACGVFRALTGQADHWHVVGLGGRRGATGEQLAYDLIRAGVTAPIVTYND
                     IAQALAAIRSQTVTGDRVLITGSFLTVAGGMKLLEVPQFYEV"
     gene            3247..>3604
                     /locus_tag="VE844_20565"
     CDS             3247..>3604
                     /locus_tag="VE844_20565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018952805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03649.1"
                     /translation="MIEEKLKQRLVGATVLVGLGVIFIPMLLDNSGNSGISESAIKTP
                     SRPSDSFTSVPLAEKPAERAPPKLQEPPPLPARVEPSRLEAVLPVEPAEEGVAPKEEL
                     EVDPAQAGGGRASKAAQ"
BASE COUNT          727 a          938 c         1135 g          804 t
ORIGIN      
        1 tcgcgcccat cctggcctct gatcggatca tcgtagtcaa tctttccggg cggggtgaca
       61 aggatatcca cacggtagcc tcgcgccaag gcatcaccct ttaaggatcg cctctatgag
      121 tcgaatcacg gcttgttttg agggtctccg aaaacagcgg cgcaaggccc tgatcccgtt
      181 catcaccgcg ggcgatcccc aaccggctta cacggtgccc ctgatgcacg ccttagttga
      241 ggggggagcg gatattattg agctgggtgt gccgttctcc gatccgatgg ccgatggccc
      301 ggtgatccag cgttcgagtg agcgggcctt ggtgcatggc gtcagtttgc acgatgtcct
      361 ggccctagtg aaggctttcc gtgaaaagga cccgatcaca ccggtggtct tgatgggata
      421 ccttaacccg attgagagga tgggctatga aggattcgct cgggaggctg ggtacgcagg
      481 tgtcgatggg gtcttggtgg tggatctgcc acccgaagaa gcgggcgatc tcctcgacgc
      541 cttgcgggcg catgcgcttg atccggtgtt tttactcgca cccaccacga gcgacccgcg
      601 tatcgagcgg atctgccagg tggcgtgtgg ttttgtttat tatgtatcgc tcaagggcgt
      661 caccggaagt gataagttgg acatcaacgc ggtcaaagca cgtatagaga ggatccgccc
      721 ccatacgcat cttcccattg gcgtagggtt tgggatcaag gatgcagaga gtgctgcccg
      781 tatcgcctcg gtgagcgatg ctgtggtcgt tggcagtgcc ctggtagaga ggataggatt
      841 attggccgag cagcctgaga tgctgggaga cgaggtaaaa tcctttgtgc gcgcactgcg
      901 gcaggccgtg gatgctgctt aatctttaat ctatttgagt gttaggccca gcaaaacacc
      961 caactctgtg agcgtaagtg atatggcaag cgaaaacacg tggtcgatga acaactggtt
     1021 caagaaattg ttaccgtccc ggatccagac taatggaacg gctaagcggg cggtgcctga
     1081 gggactttgg accaactgtt ccggttgtaa ggcggtgctc taccgcgcag agctcgagcg
     1141 caacctcaat gtctgcccaa agtgtggcca tcatatgcgc atcggggcaa gagagcgtct
     1201 tgatcatttt ctcgatcctg agccgcgtga agagatcggg agcggtattg agcccattga
     1261 ttttttgcgg tttaaagata ccaagcgcta taaagaacgc ctgagccaag cccagaaggc
     1321 cactgcagaa ttggatgccc tggtggtcat gaaggggtgt gtcaagtctg tgccgctcgt
     1381 agcttgcgcc tttgaatttg aatttatggg cggttccatg ggatcggtag tcggcgaacg
     1441 cttcgtccgc gccgtaaacg cgtgtctcga gtatgagatc cctctggtgt gtttttctgc
     1501 cagcggtggc gcaaggatgc aggaggccct ggtatccttg atgcaaatgg ctaagaccag
     1561 tgccggcctg gcagcgctca acagacgtgg cattccctat atttcagtgc tgaccgatcc
     1621 gaccatgggt ggggtatccg cgagcctggc gatgttgggc gacatcaata tcgccgagcc
     1681 taatgcattg atcggttttg caggtccccg ggtgattgag cagacggtgc gtcagaccct
     1741 ccccgaggga tttcagcgca gtgagtttct gctacaacac ggcacaatcg atatgatcag
     1801 cgatcgtcgc tctctgcgcg atcggatcgc ctcgatgatg gcgctcttgt cacatcgtcc
     1861 cctggcctga gtgtcctgtt tttttctgct gacgtggata ccagctcacc gatcgcggta
     1921 atggccccac tgcccctgcg caggcggttc aagcggctca gtgaatggct ggcctggcaa
     1981 gagactttac atatcaaaga gatcgagctg ggccttgaac gctgtaagga ggtagccgag
     2041 cggataggcc tgcggacgcc cacctatcag gtcgtgacgg tcggcggcac caatggcaaa
     2101 ggttccagcg tagcgatgct ggactcgatc ctgcgggctg cgggttataa agtggccatg
     2161 tatacctcgc cgcatctact ccgctacaac gagcgcctgt gtattggggg cgtgccggta
     2221 agcgacgagc agctttgcca ggctttccaa cgtgtcgatg aagcgcgggg ttctatcgtg
     2281 cttacctatt ttgaattcgg caccttggcc gcactcgata tcctgcagcg gacggcgatc
     2341 gacctcgccg tcctggaagt ggggctgggc gggcggctcg acgcggttaa tatgatcgat
     2401 cccgatgtgg cattgatcgc tacgataggg atcgatcacg tcgagtggct gggacaggat
     2461 cgggcagcga ttgcccgcga gaaagcaggc attttcaggg caggccgccc ggcggtgtgc
     2521 tccgatccaa accctccctg gacgctcacc gaccaggctg aacagatggg cagcaggctt
     2581 tatttgctgg gacgcgatta tacctttgag gtggcgggag agacgtggtc atggcactca
     2641 ggccctacct cctataagca cttgccacga ccgggcttat gcggcgatca tcaattccag
     2701 aatgcggccg gtgtgctcat ggtagtgtat accttggcag aacggttgcg ggtggatcag
     2761 caggcgatcc ggcgcgggct tgcgggggta aagctagcag ggcgttttca ggttatccca
     2821 ggccccgtcg agtatatcct ggatgttgcg cataatccgc aagcaaccgg gatcctggct
     2881 cagatcttga ggcagcgccg ggccaagggt aggacccata tcttgatagg catgctgaaa
     2941 gataaagacg cctgtggagt gttccgagca ctcactgggc aggcggatca ttggcatgtg
     3001 gtcggactcg gtgggaggcg gggtgcaacc ggtgagcagt tggcttatga tctcatcaga
     3061 gcgggtgtga ctgctccgat agttacctat aacgatatcg ctcaggcgct cgcggcaatc
     3121 cgatcacaaa ccgtcacggg ggatagagtg cttattaccg gttcattttt gaccgttgct
     3181 ggaggcatga aactcctaga ggtcccccag ttttatgagg tttaatagcg catcagaggc
     3241 ttgcttatga tagaggagaa gctcaaacag cggcttgtgg gcgccaccgt gttagtgggg
     3301 ctcggcgtga tattcatccc gatgctgttg gataattcgg gtaattccgg catctcggag
     3361 tcggcgatca aaactccctc ccggccaagc gatagcttca cttccgttcc attggccgag
     3421 aaaccggcag agcgcgcgcc gcctaaactg caagagccac ctccgctgcc agcacgggtt
     3481 gaaccttctc gcctggaggc ggtgttaccg gttgagcccg ccgaggaagg ggtcgctcct
     3541 aaggaggagc tagaggtaga tccggctcaa gcaggggggg gtcgggcaag caaagcggct
     3601 cagg
//
LOCUS       DASQSL010002042         1448 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_95023, whole genome shotgun sequence.
ACCESSION   DASQSL010002042 DASQSL010000000
VERSION     DASQSL010002042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1448
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95023"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..195)
                     /locus_tag="VE844_20570"
     CDS             complement(<1..195)
                     /locus_tag="VE844_20570"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002551940.1"
                     /note="TrpG; with TrpE catalyzes the formation of
                     anthranilate and glutamate from chorismate and glutamine;
                     TrpG provides the glutamine amidotransferase activity;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate/aminodeoxychorismate synthase
                     component II"
                     /protein_id="HZC03650.1"
                     /translation="MVLMIDNYDSFTYNLVQYLGELGADVRVYRNDQIRLEEIEALAP
                     EHIVISPGPCTPNEAGISLEV"
     gene            complement(224..>1448)
                     /gene="trpE"
                     /locus_tag="VE844_20575"
     CDS             complement(224..>1448)
                     /gene="trpE"
                     /locus_tag="VE844_20575"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HZC03651.1"
                     /translation="TSPDPLGWIESFQKRFRVPRVEGLPRFTGGLVGYFGYDTVRYIE
                     PKLGPGPQSDPLGCPDILLMVSEEVLVFDNLSGKLYLIAHVDPSGCDAYRCGLARLDA
                     LADRLFGSLVSAVVSVNPRPISEADFVSGYTRERFEAAVLTIKDYIVEGDVMQVVLSQ
                     RLSVPFEALPIHLYRALRCLNPSPYLYYLDLDDFHIVGSSPEILVRLEEGTVTVRPIA
                     GTRRRGKILDEDKTLEHELLHDPKEIAEHLMLIDLGRNDIGRVAEIGSVQVTERMVIE
                     RYSHVMHIVSNVTGRLNSHHSPLDVLRATFPAGTVSGAPKIRAIEIIDELEPVKRGVY
                     AGAVGYLSWNGNMDTAIAIRTALIKDGRLHIQAGAGIVADSIPRLEWQETMSKGRAIF
                     RAVAMAEAGINWRPG"
BASE COUNT          319 a          449 c          396 g          284 t
ORIGIN      
        1 cacctcgagc gagatccccg cctcgttcgg cgtgcaaggc cccggtgaga tgacgatatg
       61 ctcgggcgcc agcgcctcga tttcttccaa gcggatctga tcgttgcgat aaacgcgcac
      121 atccgcaccg agctccccca ggtattggac caggttatag gtgaacgagt cgtagttgtc
      181 gatcatcaat accatctaag cagcccccca ggcagtccat cactcagccc ggcctccaat
      241 tgatccccgc ctcagccatc gccaccgcgc ggaagatagc acgccctttg ctcatcgtct
      301 cttgccactc caggcgcggg atcgaatcgg cgacaatgcc cgcacccgcc tggatatgca
      361 acctgccgtc cttgatcagg gccgtacgga tggcgatcgc ggtgtccata ttgccgttcc
      421 acgagaggta acccacggcg cccgcatata cgccgcgttt gacgggttcc aattcatcga
      481 tgatctctat cgcccggatc ttgggcgccc cgctcaccgt tcctgcagga aaggtcgcgc
      541 gcagtacatc gagggggcta tgatggctat tgaggcggcc ggtgacattg gagacgatgt
      601 gcatgacgtg tgaatagcgt tcgatcacca tccgctcggt cacctgaacg ctgccgatct
      661 cagccacccg cccgatgtcg ttgcgcccca gatcgatgag catgaggtgc tctgcgatct
      721 ccttgggatc atggagcaac tcgtgctcca gggtcttgtc ttcgtcgagt attttacctc
      781 ggcggcgggt accggcaatg ggacggacgg tcactgtgcc ctcttcgagc cgcaccagga
      841 tctccggtga agaccccacg atgtgaaaat catcgaggtc gagataatac agatagggcg
      901 atggattgag acagcgcaat gcgcggtaga gatggatcgg caacgcttca aagggcacag
      961 aaagccgttg cgagagcacc acctgcatga catcgccttc gacgatatag tccttgatcg
     1021 taaggacagc cgcttcaaac cgctcgcggg tgtagcctga gacaaagtct gcctccgaga
     1081 tcgggcgtgg attcacggac accactgctg aaaccaaact gccgaataat ctatccgcaa
     1141 gcgcgtccaa acgcgctagc ccacacctgt aagcatcaca ccctgaaggg tccacatggg
     1201 cgatcaaata cagtttgccg ctcagattat cgaataccaa aacctcctcg gagaccatga
     1261 gcaggatatc cggacagccg agcggatcgc tctgcggtcc gggtcctagc ttcggttcta
     1321 tataacggac ggtgtcatag ccaaaatacc cgaccaaccc ccccgtgaag cgaggcagcc
     1381 cctctacccg cgggacccga aaacgttttt ggaaagattc gatccatccc aagggatcgg
     1441 ggcttgtg
//
LOCUS       DASQSL010002043         1239 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_164704, whole genome shotgun sequence.
ACCESSION   DASQSL010002043 DASQSL010000000
VERSION     DASQSL010002043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1239
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164704"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            4..77
                     /locus_tag="VE844_20580"
     tRNA            4..77
                     /locus_tag="VE844_20580"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:38..40,aa:Asp,seq:gtc)
     gene            110..186
                     /locus_tag="VE844_20585"
     tRNA            110..186
                     /locus_tag="VE844_20585"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:144..146,aa:Phe,seq:gaa)
     gene            992..>1239
                     /locus_tag="VE844_20590"
     CDS             992..>1239
                     /locus_tag="VE844_20590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013873078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZC03652.1"
                     /translation="MSELTSSGKPFDISKREVWEAYERVKANKGAPGVDGCSIAEFEV
                     DLKNSLYKIWNRMSSGSYFPPPVRAVEIPKPHGGGVRVL"
BASE COUNT          228 a          292 c          455 g          264 t
ORIGIN      
        1 caaggcccag tggcgcagtt ggttagcgcg tcgccctgtc acggcgaagg tcgcgggttc
       61 gagtcccgtc tgggtcgctc ggtagtattg ggccgcgtcc ggcccggacg gccaggtagc
      121 tcagttggta cgagcgtccg actgaaaatc ggaaggtcgg cggttcgacc ccgcccctgg
      181 ccaccacctc tgaccagctc aacggtcttt atttatgatc ttcggttgat ctttgtccaa
      241 ctggctgtcc aattctgctg cttagactgc tcctcatggc acgcaggaag caggcgccga
      301 aggacctgac cggggtctgt tgcgtcgaga gatgatgggt tcggcagagt gagttgatgc
      361 ttcgtcgccc gtgttggtac gtccgcctcg gtccgcgttc gcgggattcc ggtttcgtgt
      421 gtcacgaacg ctgaagggag cttgctgtag gtagagcctc tggaggcggt gctgcgtgag
      481 agatgaaggt aggcccttcg gagccgccct gcggggggag gcttgaaacc gcccactgct
      541 gcgttagctg aagactgtcg tagtgagcga tgtgggaaaa ggcgtcgttg gaggcgtcag
      601 gtgggggtca ggaaggcgat tgctgttgac gtgtcgaaag aatcacggtt gacatcaaaa
      661 ctggggcagg gaaccagttc caggatgagt ctggcgagtg cccgttgatt ggccaggcgg
      721 tgtccggcat agaggcgacg cgagcctgat caggctgctt ttgcgtggaa cgtgagaagg
      781 cgtgccccga tatttcgacg ctgtaagggg tcgtgagagg gagtgttcca agcggcggaa
      841 accgtgaggg attgagtacc gttgcgtggg tgcgctggcg gactgactcg tagtagctgg
      901 gaagctcctg taatgggggt ggagccaagg ggtcaggtca ttcgtggttt gttcgttcaa
      961 tcaaccaggg gaatgtcctg ggaggagttg cgtgagcgag ctgacatcgt caggaaagcc
     1021 gtttgatatc tcgaagcggg aggtgtggga ggcatacgag agggtgaagg ctaacaaggg
     1081 cgcaccgggt gtggatgggt gctcgatcgc ggagttcgag gtcgatctga agaacagttt
     1141 gtacaagatc tggaatcgga tgtcctcggg aagctacttc ccacccccgg tgcgggcggt
     1201 agagataccg aaaccgcacg gcggcggggt ccgggtgct
//
LOCUS       DASQSL010002044         1355 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_54402, whole genome shotgun sequence.
ACCESSION   DASQSL010002044 DASQSL010000000
VERSION     DASQSL010002044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1355
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54402"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            47..268
                     /locus_tag="VE844_20595"
     CDS             47..268
                     /locus_tag="VE844_20595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03653.1"
                     /translation="MHTHADAEEDRTPEIAPSISPRAPWRVAEVKAQPGFRLRVRFND
                     GTEGEVNMAAFNPYEVGICQAQKIYGEKF"
     gene            complement(333..>1355)
                     /gene="glgA"
                     /locus_tag="VE844_20600"
     CDS             complement(333..>1355)
                     /gene="glgA"
                     /locus_tag="VE844_20600"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013033168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004373 - glycogen (starch) synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HZC03654.1"
                     /translation="NDWQTGLIPPLLARGSGYPASVFTIHNLAYQGLFDWHTFADLGL
                     PPDLWHPEAMEFYGRFSFIKGGLVFSDRLTTVSPTYALEIQTPEFGYGLDGLLRHRAQ
                     DLVGILNGIDYSIWDPRCDPYIAERYDPEDLAKRSINKRDLQQYFKLRTDPDALLMGS
                     VGRLVEQKGIDLILHAIPLLYREDVQLVVLGSGDKALAEALKGLAGDNPGRIGVYIGY
                     DEALAHRIVAGADVFLMPSRYEPCGLNQMYSLRYGTIPIVRSTGGLADTVVDTTPETL
                     QAGSATGFTFKEPTPAALASAIRRALFCYHDPKTWLQIQSTGMAQDFSWERSARAYAD
                     VYRHLC"
BASE COUNT          329 a          376 c          362 g          288 t
ORIGIN      
        1 aatgggcctc tgagtatcga gatgagttat tggaggactg ggaactatgc acacgcatgc
       61 agacgccgaa gaagatcgaa cccctgaaat agccccatcc attagcccgc gggccccttg
      121 gcgcgtcgcg gaggtgaaag cccagcccgg atttcggttg cgggtgcgct tcaacgatgg
      181 taccgagggt gaggtgaaca tggcggcgtt taatccctat gaggtcggga tttgtcaagc
      241 gcaaaagata tatggtgaaa aattttgagt cgagcatttc aattacattt ggcgcgttat
      301 catctcgact ggcagtcgct aaatatacga acttagcaca agtgccgata aacatcggcg
      361 taagccctgg cgcttctctc ccagctgaag tcctgtgcca ttcccgtact ctggatctgc
      421 aaccatgtct tgggatcatg ataacaaaac aatgcccgac ggatcgccga agctaaggcg
      481 gcaggggtcg gctctttaaa ggtaaaaccc gtcgcgctac ccgcttggag agtctccggg
      541 gtggtgtcca ccacggtatc tgcaagcccg ccggtgctgc gcacgatcgg tatcgtgcca
      601 tagcgcaggc tgtacatctg gttcagaccg cagggttcgt acctcgaagg catgagaaaa
      661 acatccgcgc ccgccacaat acggtgagca agcgcctcat catagccgat atacacgcct
      721 atccggccag gattatcacc ggctaaacct ttcaaggcct ccgctaaggc tttatccccg
      781 cttcctaata ccacaagctg cacatcctct ctatatagca agggtattgc gtgcaggatc
      841 agatcgatcc ccttctgttc aaccaaacgg ccgacgcttc ccatcaacag cgcatctggg
      901 tccgtgcgca gcttgaaata ttgttgcaaa tcccgcttgt taatcgatct tttcgctagg
      961 tcttcgggat cgtagcgctc ggcgatgtac ggatcgcagc gcggatccca gatcgaataa
     1021 tcgataccgt ttaagatccc gacgagatcc tgagcacgat ggcgtaacaa accatccaag
     1081 ccatagccga attcaggggt ctggatctcg agcgcatagg ttggactgac ggtggtcaac
     1141 ctatccgaga ataccaagcc gcctttgatg aaggagaatc gcccataaaa ctccatagcc
     1201 tccggatgcc aaagatcagg gggtaatccc agatcggcaa acgtgtgcca atcaaagagc
     1261 ccttgatagg ccaggttatg gatcgtgaac acgctggccg ggtacccgga tccccgcgca
     1321 agcagcgggg ggatgagccc agtctgccag tcgtt
//
LOCUS       DASQSL010002045         1286 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_95064, whole genome shotgun sequence.
ACCESSION   DASQSL010002045 DASQSL010000000
VERSION     DASQSL010002045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95064"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1180)
                     /locus_tag="VE844_20605"
     CDS             complement(<1..1180)
                     /locus_tag="VE844_20605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03655.1"
                     /translation="MSRREAAWLAWYMCAVSLALTVLGLLFLVTSQSHTGAPAYDYWL
                     VNTVVAISFSIVGGMIASRLPPQNPIGWIFCTIGLLAGMRLFVAEYAIATLLAEPGSL
                     LSKFPGGEALAWVSSWLWVSHLGLFVFLALLFPDGRPPSLRWRYFAWLVGVVVVVGTV
                     AVALWPETARGFDPVNHPLGIEFATDTINPVETIVYALGLIAATSLLVRLRRSTGVER
                     QQVKWFAYAVAVLAASATLAYVVSESMGVVWLGLLSSVLVIVSVVGLPVAVGIAILRY
                     HLYNIDLLINRTLVYGSLTAVLAAVYLGSIVLFQVIFRVLTGHESQLAVVVSTLAIAA
                     LFRPLRRRIQSFIDQRFYRRKYDAAKTLEAFSAKLRDATDLAALSDDLVGLVRETMQP
                     T"
BASE COUNT          306 a          393 c          364 g          223 t
ORIGIN      
        1 gggtcggctg cattgtctcc ctcaccagcc ccaccaagtc gtcgctcagc gcggcgaggt
       61 ctgtcgcatc acgcagcttg gccgagaaag cttctaacgt cttagcggcg tcgtacttcc
      121 tgcggtagaa gcgttgatca atgaacgact ggatgcgtcg cctcaaaggt ctgaacagcg
      181 cggctatcgc cagggttgag accactactg caagctgtga ttcatgacca gtgaggacgc
      241 gaaagatcac ctggaacagg acgatgctac ccaggtacac cgctgcaagc acagccgtga
      301 gggaaccgta caccaacgtc cggtttatga ggaggtctat gttgtagagg tggtagcgca
      361 aaatcgctat gcccactgca accggcaggc ccacgacact gactataacc aatacggagc
      421 taagcaatcc cagccacact acacccatcg attcagagac cacgtaggcg agggtggcgc
      481 ttgcggccag taccgccacg gcgtaagcaa accacttgac ctgctggcgc tccactcctg
      541 tagagcgccg tagccgcacc aacagggagg tcgctgctat gagccccagg gcgtacacga
      601 ttgtctccac cgggttgata gtatcagttg cgaactctat cccgaggggg tggttgacag
      661 gatcgaaccc tctggccgtc tctggccaga gagctaccgc tactgttccc actacgacaa
      721 ccacaccaac aagccacgcg aagtaccgcc aacgcaacga aggcggtcga ccgtcgggga
      781 acagtagtgc caagaacacg aaaagcccta ggtgcgaaac ccacagccag gaggagaccc
      841 acgcaagagc ctcgccgccc gggaacttgc ttagcagcga gcccggctcc gctagtaatg
      901 tggcgatggc gtactcggcc acaaagaggc gcatccctgc aaggaggcct atggtgcaga
      961 agatccagcc tatcgggttc tggggaggaa ggcgggaggc gatcatacct cctactatcg
     1021 agaagctaat cgctaccacg gtgtttacga gccagtagtc ataggccgga gcgcccgtgt
     1081 gggactggct cgtgaccaga aagagaagac cgagcaccgt caacgccaaa gagacggcgc
     1141 acatgtacca tgcaagccag gcagcctcgc gccggctcat accacccgtt cctcgcttcg
     1201 gtcttttcac tgctgcacct ggtgtcaagg tggctccacc tatcgcccca ctaactgcta
     1261 cagactaatg gtgacacttt gtgtgg
//
LOCUS       DASQSL010002046         1679 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_95066, whole genome shotgun sequence.
ACCESSION   DASQSL010002046 DASQSL010000000
VERSION     DASQSL010002046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1679
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95066"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            194..715
                     /locus_tag="VE844_20610"
     CDS             194..715
                     /locus_tag="VE844_20610"
                     /inference="COORDINATES: protein motif:HMM:NF019430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HZC03656.1"
                     /translation="MNNTFAFLKTIALGLMLFSNAVVAGEPTPGDAGPPRPEHLMRKM
                     RGMSGMMPGGRDYTHTVLRRAKDIKLTDEQRQKIMEIQGQYQEKGKTHFQRLNQAMAT
                     VRKGLLEPTVDEAAIHKASKEHATALEAMIESGLKIHREVDAVLTAEQIDQLQSHATP
                     EIKTPLSSPRETP"
     gene            888..1433
                     /locus_tag="VE844_20615"
     CDS             888..1433
                     /locus_tag="VE844_20615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HZC03657.1"
                     /translation="MTEKPFLTDIKTLRERARQHIEQGAVTPGYSANRETVVNLLNEA
                     LATETVCVLRYKRHYFMASGINAQGVAAEFLQHANEEQAHADQIAARIVQLGGEPNLS
                     PEGLLTRSHSEYVEGSSLIDMIKEDLVAERIAIDSYREMIGYLGNDDPTTRRMMEGIL
                     AVEEEHADDLVNLLKELGSSG"
BASE COUNT          419 a          440 c          504 g          316 t
ORIGIN      
        1 acctcaccaa gcggtaataa ggcgaggcgt cggtggcata gagcgcatgg gtagcatcgt
       61 ctgtgaggag atcgctctgg atctctaggc ggagcgcatc gaggttttgc aacaaatcgt
      121 tcaagtgctt ggatacatga ggtgttagga tctgtttttc aattattcta ttcttctttt
      181 ttggagattg aacatgaata acacgttcgc tttcttaaaa accatcgcgc tcggtttaat
      241 gctttttagc aacgcggtag tagccggtga gcctacaccc ggcgatgcag gcccgcctcg
      301 gccggaacat cttatgcgca agatgagggg gatgagcggc atgatgccgg gaggccggga
      361 ctacacccat accgtgctca gacgtgcgaa ggatataaag ctcacggatg agcagcggca
      421 gaagatcatg gagatccaag gacagtacca agaaaagggt aaaacccact tccagaggct
      481 caatcaagcc atggcaacgg tgcgaaaggg cctgctggaa cccaccgtgg atgaagcggc
      541 gatacacaag gcaagtaaag aacatgctac tgccttggag gcgatgattg agagcggatt
      601 gaaaatacat cgggaagtcg atgcggtgct cacagctgag cagatcgatc aattgcagtc
      661 acacgctacg ccggagataa agacgccact ttccagcccg cgggaaaccc cataaaaacc
      721 cgcgcagggg gctgctgtct tcaggcagca tggggaaggc agtattacgt ctgggcttct
      781 agcaaggaga agtatgataa gctacgactt tgggtagatc tcaaccgtga gactggtgag
      841 ggtgggcatg ggttgtccgt gctggtttta tcctctggga gatagctatg actgaaaaac
      901 cgtttcttac agacatcaag accctgcggg aacgcgcccg gcagcacatc gaacagggcg
      961 cggtgacacc cggatacagc gccaaccgag agaccgtggt gaatctgctc aatgaggcgc
     1021 tcgcaactga gaccgtctgt gtattgcgct ataagcgcca ttactttatg gcctcgggca
     1081 tcaatgcgca gggtgttgca gcggagttcc tgcaacacgc gaacgaggag caggcgcatg
     1141 ccgatcagat cgccgcccgc atcgtgcagc tcggcggcga gccgaacctc tcgcccgagg
     1201 gacttcttac ccgcagccat tccgaatacg tcgaaggcag ttcgctcatc gacatgatca
     1261 aagaggacct cgtcgccgag cgcatcgcca tcgatagcta tcgcgagatg atcggttatc
     1321 tcggcaacga tgacccaacg actcggcgca tgatggaggg gatcctggcg gtagaagaag
     1381 agcacgcgga tgatctcgtg aacctgctca aagagctcgg cagcagcggc tagatccccc
     1441 gaactgcttg cgccagaggg tggcccggct gggaacccag cgggttggcg agggcgatca
     1501 gggcgagaac gctatttcag agtgacgcat ccagcccaaa acaggcactg aggaagcccg
     1561 gcccgtgccg ggccaggcca tccaggcaaa agccgcgctt tgagggggga agctgcccga
     1621 tcagacgcgc caacacatag aatctttcaa attcatcgtg cgccgcgcta aacagtacc
//
LOCUS       DASQSL010002047         1290 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_109348, whole genome shotgun sequence.
ACCESSION   DASQSL010002047 DASQSL010000000
VERSION     DASQSL010002047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109348"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            204..455
                     /locus_tag="VE844_20620"
     CDS             204..455
                     /locus_tag="VE844_20620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03658.1"
                     /translation="MAFNFKEGGDVTNAATNIAVGGYSDADAVAVGGAGILGGIGGAG
                     TALGGYADSSATNVNLQQGYADGTTDNVVHSGNVGPIGS"
     gene            533..787
                     /locus_tag="VE844_20625"
     CDS             533..787
                     /locus_tag="VE844_20625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03659.1"
                     /translation="MGITTGTKNGGELSNESEQTGVGGVASSNAGAFGGSGLFDGQGG
                     LAGAFGGLSDAGADLGSFQGGFADGADDNIFNSVTTINIS"
     gene            845..>1290
                     /locus_tag="VE844_20630"
     CDS             845..>1290
                     /locus_tag="VE844_20630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017939067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HZC03660.1"
                     /translation="MNRRWILMTGGLLGAMAIGAEEIQDFGQRIPNEEEFIEALSPGP
                     DAAGGLKMRGIKPMPAARPEAPKGASIALKFDFDSATLSASAKQTLDKLGAALQDERL
                     EGYRFQIEGHTDSKGSAEYNKRLSERRARSVKEYLVERFQIAPERL"
BASE COUNT          306 a          277 c          427 g          280 t
ORIGIN      
        1 cgcgcagcct gtgcctgata tcggcaccct agttccctga gcagcacatc cttccgcgct
       61 tctgtcaggg tttccaaggc gggtaggtca agcatcagcg ataaaataca ggattaacag
      121 ttcacctgtt atctagcttg acataactac gggcttactg ctagagaggc tgaatagtta
      181 cattattttt tgaggagaat ctcatggctt ttaatttcaa agaaggtgga gatgtaacca
      241 atgctgctac gaacatagcg gtgggtggtt attctgatgc tgatgcagta gcggtcggcg
      301 gggccgggat cctgggtggc ataggcggcg caggaacagc tctaggtgga tatgctgatt
      361 ccagtgccac caatgtcaac ctgcagcagg gatatgcgga cggtactaca gataacgtgg
      421 ttcactctgg gaatgtaggt ccgatcggaa gctagtatag acaaggagtt agaaccggtc
      481 acacagagca agctctgtgt gaccgggatt ttagacgagg agaattaagg ttatgggaat
      541 cacgacaggc actaagaatg gtggcgagct cagtaatgaa tcagagcaga caggggttgg
      601 cggagtggcc agttccaatg ccggggcctt tggaggcagt ggcctattcg atggccaggg
      661 cggtttagca ggggcatttg gggggctaag cgacgccggc gctgatctgg gatcgtttca
      721 aggcggtttt gctgacgggg ctgacgataa tatcttcaat tccgtgacga cgattaatat
      781 cagttaaggt gaagggcccc agtgggcatt cggccccctg gggcaaaccg aggaggtagg
      841 ggtgatgaat aggcggtgga tcttgatgac aggcggcctc ttaggggcaa tggcgatagg
      901 ggctgaggag atccaagatt ttggtcaacg tatccccaac gaagaggagt ttattgaggc
      961 cttgtcgccg gggccggatg ctgcaggggg gctaaagatg cgggggatta aaccgatgcc
     1021 tgcagcgcgg cccgaggcgc ccaaaggggc gtcgatagca ttgaagtttg atttcgattc
     1081 ggccaccctc tcagcctcgg ccaagcagac cttggacaaa ctgggggcgg cgttgcagga
     1141 tgaaaggtta gaaggctatc ggttccagat tgaggggcat accgacagca agggcagcgc
     1201 ggagtataat aagcggttat cggagcgtcg cgcacgctcg gtgaaggaat atctggtgga
     1261 gcgctttcaa atcgcgcctg agcggctgaa
//
LOCUS       DASQSL010002048         2483 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_95091, whole genome shotgun sequence.
ACCESSION   DASQSL010002048 DASQSL010000000
VERSION     DASQSL010002048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2483
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95091"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..260
                     /locus_tag="VE844_20635"
     CDS             <1..260
                     /locus_tag="VE844_20635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03661.1"
                     /translation="GESLPISRVVERHRDQILKGYPSPRGVPNNAGYALDVIARQQPW
                     EPQGPPFNLAPLLCGGEGTLALVTEVTVRLKCMFWDEAMKL"
     gene            309..551
                     /locus_tag="VE844_20640"
     CDS             309..551
                     /locus_tag="VE844_20640"
                     /inference="COORDINATES: protein motif:HMM:NF014622.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HZC03662.1"
                     /translation="MSSITTVNQAPLSLLHAARRRVSIPIVAIGGITPENGGVLIEVS
                     ADLLVVIEGVFGQPDPKAAARRYTELFRTPIPGVKS"
     gene            548..1834
                     /gene="hemL"
                     /locus_tag="VE844_20645"
     CDS             548..1834
                     /gene="hemL"
                     /locus_tag="VE844_20645"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0042286 - glutamate-1-semialdehyde
                     2,1-aminomutase activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HZC03663.1"
                     /translation="MTRSQALFEEAQQFIVGGVNSPVRAFTGVGGEPIFFQHGEGAYL
                     LDEDDRSYIDYVGAWGPLILGHAHPNVVGAVREIAAKGLGFGAPTAVETALAKKICEL
                     MPSIERLRLVNSGTEATMSAIRLARGYTGRDKIVKFEGCYHGHADPLLVKAGSGTLTL
                     GVPSSPGVPAALAEHTIVVAYNTLEQIQKIFAKIGESIAAIIVEPVAGNMNCVLPVPG
                     FLEGLRTLCDAYGSVLIFDEVMTGFRVALGGAQALFAVRPDLTTLGKVIGGGLPVGAF
                     GGRLAIMEQLAPLGPIYQAGTLSGNPVAIAAGLATLESVSEPGFFGKLSTTTAQLVQG
                     LREQAAAAHIPFTTNHLGGMFGFFFTDEDPVTHFAQVMACDQTRFKKFFHGMLSEGIY
                     LAPSAFEAGFVSSAHGEREINATLEAAGRVMYQIAT"
     gene            complement(1902..>2483)
                     /locus_tag="VE844_20650"
     CDS             complement(1902..>2483)
                     /locus_tag="VE844_20650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HZC03664.1"
                     /translation="LAIKLPSGKLHNRSYLLDARGDIVARYNKLHRFDVSLRMGESYR
                     ESATIEAGDRAVVATTPWGGLGLSICYDVRFAYLYRALAQAGAVYLAIPAAFTRTTGE
                     AHWHTLVRARAIETGSYVFAPGQCGVRPNGRATYGHSLMVDPWGRILADGGEEPGFIM
                     AEIDPARVNEVRRMIPALQHDRTFTGNEAQGSL"
BASE COUNT          500 a          718 c          745 g          520 t
ORIGIN      
        1 acggcgaatc gctgcccatc tcgcgcgtgg tggaacgcca tcgggaccag atcctcaagg
       61 gttatccgag tccaagaggg gtcccaaaca atgccggtta tgccctcgat gtgatcgccc
      121 ggcaacaacc ctgggaaccc caaggaccac cgtttaatct cgcgccgctc ctctgcggtg
      181 gcgaagggac cttggcgctt gtgaccgagg tgaccgtgcg tttgaagtgc atgttctggg
      241 acgaagctat gaagctataa ggacgtatgc taacgatggt ggtgaaacga tcgaacggcg
      301 gacttggttt gagttcaatc actacggtga accaggctcc gctctcgtta ctccacgcag
      361 cccgccggcg cgtgtccata cctatcgttg caattggagg catcacgcct gagaatggcg
      421 gtgtcttgat cgaagtcagc gccgatctgc tggtcgttat cgaaggcgtc tttggccaac
      481 cggatccaaa ggcagcagca cgccgctata ctgagctatt ccgtacccct ataccaggag
      541 tcaaatcatg acccgttcgc aagccttgtt tgaagaagcc cagcaattca tcgtaggtgg
      601 tgtgaattcc ccagtccgcg ccttcacagg ggtggggggt gagcccatct ttttccagca
      661 tggcgaaggc gcctacctgc ttgacgagga cgatcgaagc tatatcgact acgtaggcgc
      721 gtggggccca ctgatcctcg gccatgctca ccccaacgtc gtcggtgctg tgcgagagat
      781 agccgccaaa ggattaggat tcggcgcgcc gacagccgtt gaaaccgccc tggctaagaa
      841 gatctgtgaa ttgatgccct ccatagagcg gctacgcctg gtcaactccg gcaccgaggc
      901 caccatgagc gcgatccggc tggcgcgggg ttatactggg cgagataaga tcgtaaaatt
      961 cgaagggtgt tatcacgggc atgcggatcc cttattggtc aaggcaggat ccgggacctt
     1021 gacattgggc gtcccaagct cccctggtgt gccggcggct ctggccgagc atactatcgt
     1081 tgtggcctat aacacccttg aacagatcca gaagatcttc gcaaagatcg gcgagtcgat
     1141 cgccgcgatc atcgtggagc cggtggccgg caatatgaat tgcgtcctgc ctgtgcccgg
     1201 gtttttagag ggcctgcgca cgctctgcga tgcatatggc agcgtgctta tcttcgatga
     1261 ggtcatgacc ggttttcggg tcgcactggg cggggcgcag gcgctctttg cggtgcgtcc
     1321 ggatctgacc acgctcggta aggtgattgg cggtggcctg cccgtgggcg cgtttggcgg
     1381 acgtctggcg atcatggagc aactggcgcc cctcggtccc atctatcagg ccggcaccct
     1441 ttcaggtaac ccggtggcga tagcggcggg gcttgcgacc ttagaatcgg tttcggaacc
     1501 gggctttttt ggaaaactca gcacaaccac tgcgcaactg gtccagggac tccgggaaca
     1561 ggcggctgcc gcgcacatac ctttcaccac caatcactta ggcgggatgt ttggtttctt
     1621 ctttaccgat gaagatcctg tcacccattt cgcccaggtc atggcgtgtg atcaaacgcg
     1681 ctttaagaaa ttcttccatg ggatgctttc ggagggcatc tatcttgctc cctcggcctt
     1741 cgaggcgggg tttgtctcaa gcgcacacgg tgaacgcgag atcaatgcta cccttgaagc
     1801 tgcagggcgg gtaatgtacc agatcgccac atagagcatc tctagcccga ttaagctcag
     1861 atcgagctag ctgggtggcg tcgcgagata cgcccatgat gttatagtga tccttgtgct
     1921 tcattgcccg taaacgtccg gtcatgctgc agggccggga tcatccggcg cacttcattg
     1981 acccgagcgg ggtcgatctc agccataatg aagcccggct cttctccgcc atcggccaga
     2041 atcctccccc acgggtcgac catgagagag tggccataag tagcccgacc attcgggcgc
     2101 accccgcact ggcccggcgc aaagacataa ctgccggtct cgatggcgcg agcgcgcacg
     2161 agggtatgcc agtgtgcttc cccggtagtc cgggtaaagg ccgcggggat cgcgagataa
     2221 acggcgccgg cctgggctag ggcacggtag agataggcaa agcgcacgtc ataacagatg
     2281 ctaaggccga gtccgcccca cggtgtagtt gccaccacgg cccgatcgcc agcctcgatg
     2341 gtggccgatt cccgatagct ctcacccatc ctcaagctga catcaaagcg gtgcagcttg
     2401 ttgtagcggg ccacgatgtc gcctctagca tcgagcagat atgaacggtt gtgcagctta
     2461 cccgagggaa gcttgatcgc aag
//
LOCUS       DASQSL010002049         1509 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_164757, whole genome shotgun sequence.
ACCESSION   DASQSL010002049 DASQSL010000000
VERSION     DASQSL010002049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164757"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..191
                     /locus_tag="VE844_20655"
     CDS             <1..191
                     /locus_tag="VE844_20655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03665.1"
                     /translation="EDLQTLYAMKGRLEETGEMAKTLGLGNGGEAGSIYQALVQVSAL
                     VDNEIKAVRNIVGPQEDR"
     gene            357..659
                     /locus_tag="VE844_20660"
     CDS             357..659
                     /locus_tag="VE844_20660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03666.1"
                     /translation="MITVTEEAKELCLNVEYPDDTVLRLDPVVDQNTGETQIGISAGQ
                     PMSDDQVVEHNGESLVHIAAPLSKALDGSTLDAVDTPEGPGIGITTPGSTPLTDDS"
     gene            825..971
                     /locus_tag="VE844_20665"
     CDS             825..971
                     /locus_tag="VE844_20665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03667.1"
                     /translation="MIEGTVGTTAQMPSESLSYLGEPRIAIGEPTWKALDREMVEALV
                     GSVI"
     gene            1276..1485
                     /locus_tag="VE844_20670"
     CDS             1276..1485
                     /locus_tag="VE844_20670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018774263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dodecin family protein"
                     /protein_id="HZC03668.1"
                     /translation="MTVASVTEISAASPEGFEAAIREGIERANKTLRNIQSAWVKDMN
                     VLMEDGQIRAYKVNLLVTFVLEDAS"
BASE COUNT          343 a          415 c          453 g          298 t
ORIGIN      
        1 acgaggacct gcagacgttg tacgccatga aggggaggtt agaagagacc ggcgagatgg
       61 cgaagaccct cggccttggc aatggaggcg aggcgggcag catctatcag gctcttgtgc
      121 aggttagcgc cctggtcgat aacgagatca aggcagtgcg taacatagta ggtcctcagg
      181 aggatcggta gtcctaacac acctcaccca caagccttaa ccctcgcttc gggctttgag
      241 tttgaatcta gcgcatctct gatagggtga ggagagttac tgcacgctcc acttcgtcgc
      301 cgacctccac gagctcttgt tgcgagtgga ctgtgtggcg agggaaggag aagggcatga
      361 tcacggtaac cgaagaagcg aaggagctct gcctcaacgt cgagtatccg gacgacacgg
      421 tgctccggtt ggatccggtg gtggaccaaa acaccggtga gacccagatt ggtatctccg
      481 ctggccaacc gatgagtgac gatcaggtag tcgagcacaa tggggagtcc ttggtgcaca
      541 tcgccgcccc cctgagcaag gcgcttgacg gcagcaccct agatgcggtc gatacgcccg
      601 aaggaccggg catcggcatc accacccccg gctctacgcc gctcaccgac gactcgtagg
      661 gagaaaaggc gtctgagcgg caagaggccc gccgggaggc gggcctctct ctttcgctct
      721 ccgaaggacg tcggacggta gattctttcc gactaagtga aggggttgcg gcggaaagaa
      781 taactagtag aaagcaccgt gttggcttga aaggtgtttt gagggtgatt gaagggactg
      841 taggcacaac cgcccagatg cccagcgaga gtttgtccta cctgggcgag ccccgcatcg
      901 ccatcgggga accgacctgg aaggccctcg accgcgagat ggtagaggcg ctggtaggct
      961 cggtgatata gggctgacac aacgaggtgt cctaaccccg cgactggttt cgccctccct
     1021 gctgatacca ggctcacagt ttcacgctcg attcgcatcc tcgcccttcg ccatagccct
     1081 attcctgtcc cagaatcgaa cctccaagat ggggtgttct gcgaagtttg tagccaagag
     1141 catggctagt ggttttctcc caccagccct taaatttgtt taatccagat ttcaatcact
     1201 attaactcgg gtccatcgta gatctgttac cacgacgtgc gtgtgaggcg aagcaccagg
     1261 aggtgtagca acgccatgac cgtagccagc gtaaccgaga taagcgccgc ctccccggag
     1321 ggctttgagg cggccatcag agagggcata gagcgcgcta ataagaccct acgcaacata
     1381 cagagcgctt gggtcaagga catgaacgtc cttatggagg acggccagat aagggcttat
     1441 aaagtcaacc tcttggtcac cttcgtgctg gaggatgcct cctagctcaa taacgcgccg
     1501 gtagtctta
//
LOCUS       DASQSL010002050         1038 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_174448, whole genome shotgun sequence.
ACCESSION   DASQSL010002050 DASQSL010000000
VERSION     DASQSL010002050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174448"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(300..>1038)
                     /locus_tag="VE844_20675"
     CDS             complement(300..>1038)
                     /locus_tag="VE844_20675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014374322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HZC03669.1"
                     /translation="VLGFVIGILPGGGGVVSSLASYALEKRQAREPERFGKGAIEGVA
                     GPETANNASSTSAFIPLLTLGIPSNVVLALLFGALLLQDITPGPQLISDNPGIFWGVI
                     ASMFIGNLILLILNLPLVGIFVQLLRLRMGILAALAVVVTLVGVFSININVFDMWVVL
                     VFGLLGYMMRKTGFEPGPLILAFVLGPIMERSFRQSLLISNGDPTIFFTRPISGTLIV
                     IAALIIVLSAVQFFRKRSRERAGDAEA"
BASE COUNT          249 a          312 c          279 g          198 t
ORIGIN      
        1 tcctactctc ccctttcccg gggcacacga cctgatgaga aaagtgccat agcggcccct
       61 tccgctagcc aaccgtatcg aagccgttgc tctgctatat aagaacgagc cccaaatcgg
      121 caacgttata aagcatggta aagccgatct cactttcatc ctacccatca atccggtacc
      181 aatgaaccgc atgctaccgg gtattgccta tcccggacgc tccgtcatga ggatcacgag
      241 tgctcccccg tccactggat atatgagtct gcacgctggt gaccttgctg tgccgccatt
      301 caagcttcgg cgtcgccagc tctctcccgc gagcgtttcc tgaagaactg gacagccgag
      361 aggacgatga tcagagcagc tatcactatc agcgttccgg agatagggcg tgtgaagaag
      421 atcgttggat cgccgttgga gataaggagc gactgcctga aggatctctc catgattggt
      481 ccgagaacga aggccagaat cagtggtccc ggctcgaagc cagtcttacg catcatataa
      541 ccgaggagcc cgaacactag gaccacccac atatcgaaaa cgtttatgtt tatgctgaac
      601 acgcctacca gcgtcactac caccgccagt gccgcgagta tccccatccg cagccgcaat
      661 agctgtacga agatgcccac gagcggcagg ttgaggatta agaggatcag gtttccaata
      721 aacatcgagg cgatgacacc ccagaagatt ccggggttgt cgcttataag ctgcgggccc
      781 ggcgttatgt cctggagcaa gagcgctcca aagagtagcg ccaacaccac gttggagggg
      841 atgccaagcg taaggagcgg aatgaacgcc gaggtggagg aggcgttgtt ggccgtctcg
      901 gggcccgcga caccttctat ggcccccttg ccgaaccgct cgggttctct ggcctgacgc
      961 ttctccagag cataggaagc gagcgaggag accaccccac cgccacccgg aagaattcct
     1021 atgacgaacc cgagcacc
//
LOCUS       DASQSL010002051         1224 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_109383, whole genome shotgun sequence.
ACCESSION   DASQSL010002051 DASQSL010000000
VERSION     DASQSL010002051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109383"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(71..1219)
                     /locus_tag="VE844_20680"
                     /pseudo
     CDS             complement(71..1219)
                     /locus_tag="VE844_20680"
                     /inference="COORDINATES: protein motif:HMM:NF015038.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
BASE COUNT          251 a          402 c          329 g          242 t
ORIGIN      
        1 gcaaggtaac ggttgggcat gcgaagtttc cataggagta accgttcaga ttatgttgta
       61 aaaataagga tcatgccgca gtttgcgact tctgatcact ggcaggcaat agggaaggag
      121 ccgcttcacc ccgtagagcg gcctcatgcg cggcgatgag gtcatccaag acgttgcgct
      181 tctgttgctt gagcgtcgcc accactggca tcatacgctc aacaaagcga gagcctgccg
      241 cgctttgcgt gccaaagctg cctttgcgcc attgcacgcc tggacggatc gacctttccg
      301 ccgcattgtt ggtgggctca acgccttcga tttgcacgaa ggtccacaac gcctcacggc
      361 gcttcaaaat ctcccggcat gtcccttcgg ttttggccac cccacactgg ctaccggctt
      421 cgaggagacg ctcgaccccg cggcggagcg gcgtcatata ggagcgaaat gtcgatcgct
      481 tcagggtgcc ttcgcgcacc cgatgccacc acgcaaacat ttggtgtgcc tgctcaagca
      541 aggcctcgcc gatcacctcg gagagtcctc cacggcctcg catcgcttca aaatcccgca
      601 acagatgcga ccagcacagc tgacgccacc gcaccggata cccgttgtaa gcactgtagc
      661 ggtcggtcac caggataccc gaaaatcgtt tgcctaacag ctcgtgggcc acgtgactac
      721 cccgcgacag ccgtaccaca aataccgtca cccaactcgt caccgccacc catcaccagg
      781 cccgcttgtt gccctcgcgc caactcgttt cgtcgagatg cgctacaggt tgcgcgggga
      841 cataggcgcg ggcttcttcc acaggcttcg ctaacacctc ggtcgtggtc ttctcggact
      901 ggctgatcgt gcccacactc atcggcacac ggaatacatc ttccatcacc tgagccgtgg
      961 tgcgcttgga caagcgatac gacccgctac acagcgccac catggcatgt acccgaggac
     1021 cataagtccc gctgggcacg cccttgggcc agggcgcgcg cgtcgtctca ccgcaggtgg
     1081 ggcaagtcag ctgatgccat tggtattccg ttaccaccgg ttggatcggc ggaatctcaa
     1141 tgacctgatg acgaaacggc cgggcatctt ctccccataa tggggcctga ccgccgctac
     1201 agcaattggg tttcagcacg acca
//
LOCUS       DASQSL010002052         1004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_164780, whole genome shotgun sequence.
ACCESSION   DASQSL010002052 DASQSL010000000
VERSION     DASQSL010002052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164780"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1004
                     /gene="metE"
                     /locus_tag="VE844_20685"
     CDS             <1..>1004
                     /gene="metE"
                     /locus_tag="VE844_20685"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008197666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HZC03670.1"
                     /translation="CSLLHVPCDLDQEANEAALPAEVKRWMAFARQKLDEVVTLASLA
                     RPETHKRFAQKLAANRADMESRRQSASIHRPQVKDRVAAISASDIERRSPFTVRRQKQ
                     HAALNLPLFPITTIGSFPQTDEIRRLRTQLKNGELNQEQYEAHIKAEIEKAIRWQESI
                     GLDVLVHGEFERNDMVEYFGERLEGFAFTQNGWVQSYGSRCVKPPIIYGDVKRKAPMT
                     VKWAQYAQSLTNKGVKGMLTGPVTMLQWSFVRDDQPRETTAMQIALAIRDEVLDLEKA
                     GIRIIQIDEPAIREGLPLRKANWRAYLQWAVRAFRLASSGVSDETQIHTHMCYSEFND
                     "
BASE COUNT          250 a          256 c          292 g          206 t
ORIGIN      
        1 tgttcactct tacatgttcc ctgtgatctg gaccaggagg ccaacgaggc agcgcttccg
       61 gcggaagtga aacgctggat ggcgtttgcc aggcagaagc tggatgaggt ggtcaccttg
      121 gcttcgctgg ctaggcctga aactcacaag cgatttgctc aaaagctcgc cgccaataga
      181 gcagacatgg aaagccgcag acagtccgcc tcgatccata ggcctcaggt caaagaccgc
      241 gtcgccgcga tcagcgcctc ggatattgaa cgccgtagtc catttacagt gcggcgccaa
      301 aagcagcacg cggccttgaa tctcccgttg tttccgatca ccactatcgg ctctttcccg
      361 caaactgatg agatccggag actgaggacc caacttaaga acggggaact gaatcaggaa
      421 cagtatgagg cgcacatcaa ggcggaaatc gaaaaggcga tccgttggca ggaatcaatc
      481 ggcctggatg tgctggtaca cggcgagttt gaacgcaacg atatggtgga atatttcggt
      541 gagcggctag agggctttgc attcacccag aacggctggg tgcagagtta tggttcgcgg
      601 tgtgtcaaac cgcccattat ctatggcgat gtcaagcgca aggcacccat gacagtgaag
      661 tgggcgcagt atgcgcaatc attaacgaac aagggagtca agggcatgtt gaccggtcct
      721 gtgaccatgc tccaatggtc atttgtcaga gatgatcagc cacgcgaaac gaccgcgatg
      781 cagattgcgc tggcgattag ggatgaggtg cttgaccttg aaaaagccgg gatccggatc
      841 attcagatcg acgagccggc catcagggaa ggcctaccgt tacggaaagc caattggcga
      901 gcatatctcc aatgggccgt gagagcgttt cgactggctt cctccggcgt ttccgatgaa
      961 acacagatcc acacgcatat gtgttattcg gagttcaacg atat
//
LOCUS       DASQSL010002053         1029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_109399, whole genome shotgun sequence.
ACCESSION   DASQSL010002053 DASQSL010000000
VERSION     DASQSL010002053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109399"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..579
                     /locus_tag="VE844_20690"
     CDS             <1..579
                     /locus_tag="VE844_20690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03671.1"
                     /translation="VTNLPIATARIVVAIYLRRWPVAVSSEGHILQSVEVRPRLKDSG
                     LVAWEAPWRESKTAEPSNNVLEIEYWQSTRLQRAVNAGVASLHAIPVAETVYNVRRQQ
                     GPLETSLTRRLSPAGYQRRHGTKEDGSTGEARGVRRGKLVEEASPITVSGKWRRRRPG
                     GGSGRSTVDRRATKRAWREGPGPVSAPLVKVR"
     gene            639..755
                     /locus_tag="VE844_20695"
                     /pseudo
     CDS             639..755
                     /locus_tag="VE844_20695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000169371.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="maturase"
     gene            752..>1029
                     /locus_tag="VE844_20700"
     CDS             752..>1029
                     /locus_tag="VE844_20700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03672.1"
                     /translation="MKVVFMTETTHNPFNEAHRVSCLRENLASSSDGEGLETGRALSS
                     VPRQSFTRQICFKELKSGLGLGQAQVTKDAARVERSVAVTLMTYLVVL"
BASE COUNT          244 a          247 c          350 g          188 t
ORIGIN      
        1 gtgaccaatc tcccgatagc aacagcgcgc atagtggtag cgatttatct tagaagatgg
       61 ccggtggccg tgtccagtga agggcacatt ctccagtcgg tggaagtccg accgagacta
      121 aaagactcag gtctcgtagc ctgggaggcg ccgtggcgcg agagcaagac ggcggagccc
      181 tccaacaacg tacttgaaat agagtattgg caaagtacca ggttgcaacg tgcagtgaac
      241 gcaggagtag cctcgttaca cgctattccg gtggccgaga cggtctacaa cgtgcgaagg
      301 cagcaagggc cgcttgaaac gagtctgaca cggcggctct caccggcggg gtatcagcgg
      361 cgacatggta cgaaggagga tgggtcaact ggagaagccc gtggtgtccg gcgaggaaag
      421 ctcgtcgagg aggcgtcgcc tataaccgtg agtgggaaat ggcggcgtag gcgcccgggt
      481 ggcggatcgg gtcgtagtac tgttgatagg cgtgcaacca aacgcgcctg gagggaaggg
      541 cccggaccag tgagtgctcc gctcgtcaag gtgaggtagg ggtgaaatga taaaggcacc
      601 catcaatctg caggagctga ggcgacggat atatcgaaag gcgaagtcgg gacatcggat
      661 gacggcgatg gagtaatgag tacttgtatg acgtgctggg tctgtactgg gactggaaaa
      721 tccacccact gccaagcgcg gagcagttct cgtgaaagtg gtcttcatga ccgagacgac
      781 ccataaccct ttcaacgaag ctcaccgggt gagctgcttg agggaaaacc tcgcgagcag
      841 ttctgatggg gaggggctgg agacgggccg agccctgagc tcggtaccgc gccagtcctt
      901 tacccggcag atctgtttta aggaattgaa aagtggattg ggcttggggc aggcacaggt
      961 caccaaagat gccgcacgcg tagaacgatc cgtggctgtc acgctcatga cgtatctagt
     1021 agtgctgtg
//
LOCUS       DASQSL010002054         1164 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_202320, whole genome shotgun sequence.
ACCESSION   DASQSL010002054 DASQSL010000000
VERSION     DASQSL010002054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1164
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202320"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1017)
                     /locus_tag="VE844_20705"
     CDS             complement(<1..1017)
                     /locus_tag="VE844_20705"
                     /inference="COORDINATES: protein motif:HMM:NF033592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC03673.1"
                     /translation="MLKSITVITLLLSALDRIDLQAIFDRDPYESRRRALPGARLVKV
                     LVVYQMIGTEKLRGLIRTLTEHAGLQAALGGTVALNTLSNGVRERDVGQMVEAWMRVV
                     QTYGPWLARMGRKFARIAVVDASLIKLSLLAYSWAEYRKRRGAAKMHAVLEWARGIPQ
                     QLVVTTGKVHDLRGAARLHWARHWTYIFDRAYLGFDFLSTLLEAGAHFVVRFKEGVGY
                     RILERFAVPQAPATAGFRLTSDWTIRLPGWEGVLLRLVSYRSPDGKLIRVLTDRFDLS
                     ALSVAQLYKERWTIENWWKWVKQMFKIKRPIGESENALPVQIVSAFVTDVLLRAFKHS
                     SGFTS"
BASE COUNT          261 a          370 c          301 g          232 t
ORIGIN      
        1 gctggtaaaa ccgctactat gtttgaaggc gcgcaacaac acatcggtga caaaggcgct
       61 gacgatctgc accggcaagg cattctcact ttccccgatc gggcgcttga tcttgaacat
      121 ctgcttgacc cacttccacc aattctcaat cgtccatctc tctttataca actgtgccac
      181 gctcagcgcg ctcagatcaa agcggtcggt caagacccgg atcaacttgc catcgggcga
      241 ccgataactg accagccgca agaggactcc ttcccagccc ggcaagcgga tggtccagtc
      301 actggtcagg cgaaagccag ccgtggcggg tgcttgcggc accgcaaagc gctcgaggat
      361 gcggtagccg accccctcct taaaacgcac cacgaagtgc gctccggcct ccagcagggt
      421 gctcagaaag tcaaagccga ggtaggcgcg atcaaagata tacgtccagt gtctggccca
      481 gtgcagtctc gccgcccccc tcaagtcgtg cactttgccg gtggtgacca ccagttgctg
      541 ggggatgcca cgcgcccact ccaagaccgc gtgcatcttg gctgctcccc gtctcttgcg
      601 atactcggcc caactgtaag cgagcagcga gagcttgatc aggctcgcat cgaccacggc
      661 aatgcgggcg aactttcggc ccatccgcgc cagccacggc ccgtaagtct gcacgacccg
      721 catccaggcc tcgaccatct gcccgacatc ccgctctcgc acaccattgg acaaggtatt
      781 aagcgccacc gtcccaccca gtgccgcttg caacccagcg tgttcggtga gggtccgaat
      841 cagcccgcgc agtttctcgg tgccgatcat ctgatagacg accagcactt tgaccaggcg
      901 cgcgccaggc agcgcacggc ggcgcgattc atagggatcg cgatcaaaga ttgcttgcaa
      961 gtcgatgcgg tccaaggcag agagcaacaa ggtgatgact gtgatagatt tcagcatgcg
     1021 aatcctcctt aaggattata cctgctaatg tcagtctacc tgacagctgg aggattcgca
     1081 gttcctttcc gatcatctca tagaccataa actcttttta tatcaaccta ttacatatgg
     1141 gacagaactg acatgaagtg gttt
//
LOCUS       DASQSL010002055         1403 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_174477, whole genome shotgun sequence.
ACCESSION   DASQSL010002055 DASQSL010000000
VERSION     DASQSL010002055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1403
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174477"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(133..915)
                     /locus_tag="VE844_20710"
     CDS             complement(133..915)
                     /locus_tag="VE844_20710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03674.1"
                     /translation="MQGLWLTLLVSIGLSALWLGPAVATGRPQRGQEATASPAAKERT
                     TAPDDGAGRVVYRLDFSDYAGGSVEAWLESKGFKLKEAAKHQDQLELSIENGALILTA
                     KEQLRGFVYNDSLDIGKFSKVRIEWGVIKFPEGASYERHVRNEALMVYISFGHETIAS
                     GNIILPDVPYFIGFFLCKDDKLNTPYIGKYYHEGGRFVCLGHPQPNETIVSEFDLVTA
                     FRAYYEKNEVPPISGVNFGVDTADAGDGGKAAAFVKKIEILE"
     gene            complement(1166..1240)
                     /locus_tag="VE844_20715"
     tRNA            complement(1166..1240)
                     /locus_tag="VE844_20715"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1206..1208),aa:Gly,seq:ccc)
BASE COUNT          331 a          387 c          375 g          310 t
ORIGIN      
        1 cccgctcatc atacccgaaa acggccgcaa gagatagcgg cgactgtcta ggagtgcacc
       61 tttacaggta ttccaggata gccgcctccc gcagtggcgt gcgaagacag ctgaaaagcg
      121 gcgcactgac gcctattcga gaatttcgat tttcttgaca aaagccgctg ctttgccacc
      181 atcacctgca tccgccgtgt ccacgccaaa gttgacgcca gagatgggag ggacctcatt
      241 tttttcgtaa taggcccgga aggccgtcac aagatcgaat tcagacacaa tagtctcgtt
      301 cggctgggga tggcccaaac agacaaagcg cccgccctca tgataatact tcccgatata
      361 aggcgtgttg agcttatcat ccttgcataa aaagaaaccg atgaaataag gcacatccgg
      421 aagaataata ttgccgctgg caattgtttc atggccgaac gaaatataaa ccatcagagc
      481 ttcgttacgg acatgtcgct cgtatgaagc tccctctggg aatttaatca ccccccattc
      541 gattctcact ttggaaaatt ttccaatatc taacgaatcg ttgtaaacaa atccacgcaa
      601 ttgctctttc gctgtcagta tcaacgcgcc gttctcgatc gacagttcga gctgatcctg
      661 atgtttcgcc gcttccttga gcttgaagcc ctttgactcg agccacgcct cgacagagcc
      721 accggcgtaa tcggagaagt cgagccgata gaccacacgc cccgcgccat cgtcgggcgc
      781 agtcgtccgc tcttttgcgg cgggagaagc ggtcgcctct tgtccccgtt gaggccgccc
      841 cgttgcgaca gccggaccga gccataacgc cgacaggccg attgagacga gcagtgtgag
      901 ccataaccct tgcatacgtg ttctcccaat gacttgatac ggggagctgg tgccgaacgg
      961 caccatcgag gtagtgatcg gtcgatccga tggggggcag cccggttgtg cgatcggtgt
     1021 tcagggggat gcgtagcgtt aggcactctg cgcagcaggg cggtcgcctc cggccgagcg
     1081 cagcttttag catgtagcca tataacacag aatactataa gcctgtgtca ggattcggac
     1141 aagtcttggc aggtatttgg agagttggag cgggagacgg gattcgaacc cgccacgtcc
     1201 agcttgggaa gctggcattc tacccctgaa ttactcccgc tccacgatga aacgaggcac
     1261 tcatcatggc cgggttttac ctgcccggca tgacttgtaa tttgtatccc taaaggtaaa
     1321 ttccacccga caggatgtca agcgaaaagt ggtgatcgat gccaggtgaa gcttttgatg
     1381 gaagaccggt gggcgcttct cgg
//
LOCUS       DASQSL010002056         1195 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_120463, whole genome shotgun sequence.
ACCESSION   DASQSL010002056 DASQSL010000000
VERSION     DASQSL010002056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1195
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120463"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..857
                     /locus_tag="VE844_20720"
     CDS             <1..857
                     /locus_tag="VE844_20720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005002389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HZC03675.1"
                     /translation="VCAFTLASTDAATKRYLADYTALELTVIRFVFTGLLLAPLLFIQ
                     PLPSLPWPFWGWLAVLLPLEILAMLLYMRAIRSSPLAQTLPYLAFTPVFSAVTGFVLL
                     GERISVQALTGILLVTLGAYLLNLDRLFAGQRLSLFMPLKAIMHHPGSRLMLITAILY
                     SVTSVLGKGALQYMPPTFFGPFYFCVLGLSTLILVSVRRMNIIGLLWRRPASHLLVGW
                     LMAVMIITHFLAIQRVEVASMLAVKRTSLLFGIVYGALLFKEAHLAQHLSAGAVIVLG
                     VLLIADKG"
     gene            complement(996..>1195)
                     /locus_tag="VE844_20725"
     CDS             complement(996..>1195)
                     /locus_tag="VE844_20725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013250548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1264 domain-containing protein"
                     /protein_id="HZC03676.1"
                     /translation="HDHEVEIATGRVQVLDVPPEKAKEIAEAAAKTDGIIFHLWYYPE
                     DKVPTGRVGFPTSIGHKPRTE"
BASE COUNT          210 a          363 c          312 g          310 t
ORIGIN      
        1 ttgtctgcgc cttcacgctg gcctctaccg atgcggccac caagcgatat ctcgccgact
       61 ataccgccct tgagcttacc gtcattcggt ttgttttcac cgggctgcta cttgctccgc
      121 tactctttat ccaacccctg ccctccctgc cctggccctt ttggggctgg ctcgcggtgc
      181 ttctgcccct cgagatcctg gcgatgctgc tttacatgcg ggcgatacgc tcgagtcccc
      241 tggcgcaaac gctgccctac ctcgccttca ccccagtttt cagtgcagtg accggcttcg
      301 tgctgctcgg ggaacggatc tctgtgcagg ccttgaccgg cattctgctg gtgacgctcg
      361 gcgcctatct cttaaacctc gatcggctgt ttgcggggca gcggctttcc ctattcatgc
      421 ccctgaaagc catcatgcat caccccggat cgcggctcat gctcatcacg gcgatcctct
      481 acagcgtgac ctcggtgctc ggtaaaggcg cattgcaata catgccaccc acctttttcg
      541 ggccgttcta tttctgtgtg ctgggcttaa gcaccttgat ccttgtcagt gtaagacgga
      601 tgaatatcat tggcctcctg tggcgtcggc cagcgtcgca tctcctggtg ggatggctga
      661 tggcggtgat gatcatcacc cattttttgg cgattcaacg cgtcgaagtg gcctcgatgc
      721 ttgccgtgaa gcgcaccagt ctcttgtttg ggatcgtcta tggcgcgctc ttattcaaag
      781 aagcgcatct ggcccaacat ctctcggcag gcgccgtgat cgtgcttggg gtattgctga
      841 ttgcggataa aggatgaggc cgaagaacat gagcgcaacg gcggcacacg tcaccgccgt
      901 tacgctattg agacactaag tcctcagact ataacataaa cgataggctg aaagatccat
      961 tcctgcattt ttcgccaggg agagtaagga tctattcact ctgtccgtgg cttatgtcct
     1021 atggaggttg ggaatcccac cctgccggtt gggactttgt cctctgggta ataccagaga
     1081 tgaaagataa taccgtcggt cttagctgca gcctcggcga tctccttagc cttctccggc
     1141 ggaacatcca acacctgtac ccggcctgtg gcgatctcca cctcatggtc gtgat
//
LOCUS       DASQSL010002057         1170 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_39297, whole genome shotgun sequence.
ACCESSION   DASQSL010002057 DASQSL010000000
VERSION     DASQSL010002057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39297"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..900
                     /locus_tag="VE844_20730"
     CDS             <1..900
                     /locus_tag="VE844_20730"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HZC03677.1"
                     /translation="GRNPHLALKALRDHIVTGKVRHLYEADIQGYFTNLNHKWLRRMI
                     SLRIADPVITGLIGKWLKAGVMEHGVVARPEAGTPQGGPISPCLANVYLHYVIDLWFE
                     KRAKRHMQGEAYLTRFVDDFVGAFQYKRDAENFDRKLRIRMKMFGLSLAPEKTRMILF
                     GRFARERAESYGGQPGTFEFLGFKHVCGADAKGKFAVIRIPSEKSCRKFLDTTYEWLT
                     RHRHWRRRDQQRHLSTQLKGFYQYFALNRCVPKLERVKHHVEKQWRHAIKRQSQRHYV
                     FWSYLRSRSWFELPQPKVLHPGF"
     gene            965..>1170
                     /locus_tag="VE844_20735"
     CDS             965..>1170
                     /locus_tag="VE844_20735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HZC03678.1"
                     /translation="MGGKVQGRPRPLSTNHLPAKGLTDLNKVIIVHDPSMEFGILADA
                     LLGVRSIPIEEIQASLPTLTGIRE"
BASE COUNT          266 a          308 c          353 g          243 t
ORIGIN      
        1 ggacgtaatc cacacttggc gctaaaggcg ctgcgcgatc acattgtgac gggcaaggtg
       61 cggcatctgt acgaggcgga tatccaaggg tacttcacga acctcaatca taagtggctg
      121 cgacggatga ttagcctgag gatcgcggac cccgtgatca ctgggctgat tggcaaatgg
      181 ctgaaagcgg gagtgatgga gcatggcgta gtagctaggc cggaagccgg aactccccaa
      241 ggcggcccga tttcgccatg cctcgcgaat gtatatcttc actatgttat cgacctttgg
      301 tttgagaagc gagcgaagag acatatgcag ggagaggcct atctgacgcg ctttgtggac
      361 gattttgtcg gtgcgtttca gtacaagcgg gacgccgaga actttgaccg caagctgaga
      421 atccgcatga agatgtttgg gctcagctta gctccggaga agacgcggat gattctcttc
      481 gggcgttttg cccgagagcg tgcggaatcg tatggcggcc agcccgggac attcgagttt
      541 ctgggcttta aacacgtctg cggggccgac gctaagggga aattcgcggt gatccgtatt
      601 ccgtcagaga aaagctgccg gaaatttctg gacactacgt acgaatggct gacacgtcac
      661 cgacactggc gacggcgcga tcagcagcgg cacctatcaa cgcagctcaa ggggttctac
      721 caatactttg cgctcaaccg atgcgtaccg aagctcgaac gtgtcaaaca ccacgtggag
      781 aagcagtggc gtcacgccat caaacggcaa agccagcggc attacgtctt ctggagctat
      841 ctacgtagcc gatcgtggtt tgagctccca caaccgaaag tgctccatcc gggattttga
      901 tctcgctacg cggcgagtgt gtcctgggaa gcccggtgcg ggaaacccgc acgccgggtt
      961 ttacttgggg ggaaaggtac aagggcgacc gaggcctctc tctaccaacc atctgccggc
     1021 caaggggctc accgacctca acaaggtcat catcgtgcat gatccatcga tggagtttgg
     1081 aattctagcg gatgcgctcc ttggtgttcg atcgattccg atcgaggaga tccaagcctc
     1141 gcttcccacg cttacaggga tccgggaaga
//
LOCUS       DASQSL010002058         1142 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_95207, whole genome shotgun sequence.
ACCESSION   DASQSL010002058 DASQSL010000000
VERSION     DASQSL010002058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95207"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(252..703)
                     /locus_tag="VE844_20740"
                     /pseudo
     CDS             complement(252..703)
                     /locus_tag="VE844_20740"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(703..>1142)
                     /locus_tag="VE844_20745"
     CDS             complement(703..>1142)
                     /locus_tag="VE844_20745"
                     /inference="COORDINATES: protein motif:HMM:NF017416.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03679.1"
                     /translation="SIRSERQFCERLQYDLLFKWFLDLNIMGPAFEPSTFSKNKTRLL
                     EHQVSRQFFSGVLAEARRRNLLSEDHFTVDGTLLEAWASLKSFRPRGGGGPPSSGGGR
                     NPEVNFRGEKRCNETPFRPPTRRPSWPVRGWGRKPSSALRDTC"
BASE COUNT          221 a          364 c          327 g          230 t
ORIGIN      
        1 atgaaggaaa tatagacaat tgcactgagc ccatacgcca ggatcactaa cgtggcgggg
       61 cattgctgga cccaacggtg acccagacgc ttcttagctg gatgcaacgg cctagcaggg
      121 tgctgaaaaa aggttgctaa cttgttgttg atgccgtgga ctttactgga taatctctag
      181 gaaaggcctg ctaccaggct agcgggcccc ggttactggt gcttcatgcc tgaggaaccc
      241 tggcaagccg gtcactgggc acactcctcc ccaggagtca gatggctggc cgatgccagc
      301 ttcaccatcc gtaccaggtt gtaggccgcc gccgtcaact ccgcccacag ctggttgcgg
      361 gctactccaa tgtagcgtac cttccggcct cctcccactg ttttgaccca gccaaagatt
      421 tcctccaccc gcttccgcac gcgttggctc accgcatatc cggggtgtcg ggtccattga
      481 tggcactgcg gcgcccagag gtgttttggg ctacgtgggg ggtgacgtgc atctcccggc
      541 attcccccac aaagtcggcg gtatcgtagt gcttgtccgc tcctaccgtc acccggtgca
      601 ctccaggcag ccgttccaac atatccaagg ccgcctccca gtccgcggta cccgtagcct
      661 gggtgatcgt tacatccacc gccaggccat tccggttctc catcagcacg tgtcccgcaa
      721 agctgagctt ggcttccttc cccagcccct tacgggccag ctgggcctcc gagtcggtgg
      781 tcgaaacgga gtctcgttgc agcgcttctc tccacggaaa ttcacctcag gattgcgacc
      841 accaccactg gaaggtgggc cgccaccgcc cctggggcga aagctcttca aagaggccca
      901 ggcttccagc agggtcccat ccacggtgaa atggtcctcc gagagcaggt tacggcggcg
      961 ggcttcagcc agcactccac tgaagaactg ccgggacacc tggtgctcca gcagccgggt
     1021 cttgttcttg gaaaaggtgg aaggctcaaa ggccgggccc atgatgttga ggtccaggaa
     1081 ccacttgaac agcagatcgt actggaggcg ctcgcagaac tggcgctcac tgcggatgga
     1141 gt
//
LOCUS       DASQSL010002059         1154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_164868, whole genome shotgun sequence.
ACCESSION   DASQSL010002059 DASQSL010000000
VERSION     DASQSL010002059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164868"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            399..827
                     /locus_tag="VE844_20750"
     CDS             399..827
                     /locus_tag="VE844_20750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014762497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03680.1"
                     /translation="MEDIDRRSALAFGFATAATLSAVLTPTPAVAQRYRPDEGREIAP
                     GVRRIELTKRASEIPAYATVSMRDMVYQPGSKSENPAMPNDMVCHCLEGELQVSQGPG
                     KQFVAKTGDVWSCVKGMPEADANNGSTIAIMRVIDLIPPA"
BASE COUNT          238 a          340 c          342 g          234 t
ORIGIN      
        1 tattgactgt gtgccgcgtc aggcatataa cgtctccgtc ctagcattct gaaaccgctg
       61 ataataggca tggagcaaca ctgcctgaaa accccgtcaa tatcgcatta ttagggcgaa
      121 agggcacgtt attgagtttt gcctaacaaa tcaaaagcca gccctctagc agtccgatgg
      181 tgagtgcgat gcccgccgct cgccgtttcg attacttgag caaagctcaa tcatcaatgg
      241 ttaggtccac gttacaccgg agtggaaagg aggtaccctg gccgaagcaa cagtggtcat
      301 tggcacaaga gcgtgtgaat ttcctctacg cgtctgccca tgtctgttgt gtttagcccg
      361 cgcgaggcgg acgaacttgc aagcgaggga ggcatctcat ggaagacatc gatcgtcgct
      421 ctgcacttgc tttcgggttc gcgactgccg ccaccttgtc ggcggtgttg accccgacgc
      481 ccgcagttgc ccagcgctac cgccccgacg aggggcggga aatcgccccc ggggtcaggc
      541 gtatcgagct cacaaagcgc gcgtcggaaa tccccgccta tgcgacggtg tcgatgcgag
      601 acatggtcta ccagccgggc tcgaagtccg agaaccccgc catgccgaac gacatggtgt
      661 gccattgtct ggaaggtgag ctgcaggtca gccaagggcc gggcaagcag ttcgtcgcga
      721 agactgggga cgtgtggtcc tgcgtgaagg ggatgccgga agcggacgcg aacaacggta
      781 gtacgatcgc cattatgcgc gtgatcgatc tcatccctcc ggcgtaaggc catggatcgc
      841 ttccgcgttg ccaagacgac ggcgcccacg gtcgtcatgc cgaacgatga gttgtggcac
      901 gtgctgagtc agctgtagaa cagggtcgtg tacccgccac cacaggggat aaaacccggg
      961 gtccagaccc ggatgaacca gccttctggg tcttgctggc cgagtctggg cctaaccacg
     1021 acgtgcagct gactgcctac agcctccgcg ctttgatgag atgtgctccc tgactatccc
     1081 tgtgaccgct tcccctgctt ctgtctcatc aaaccttcga tatctgcacg gccgaaccgc
     1141 tggggggtgt ccca
//
LOCUS       DASQSL010002060         1170 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_120482, whole genome shotgun sequence.
ACCESSION   DASQSL010002060 DASQSL010000000
VERSION     DASQSL010002060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120482"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(541..801)
                     /locus_tag="VE844_20755"
     CDS             complement(541..801)
                     /locus_tag="VE844_20755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03681.1"
                     /translation="MAEPLDPQSMSNEEGAQRLADTSRHMEEVGAELRALSPTDPSGD
                     MAAVIRHLYLIADQHTLMLESLRRRVERLEAGSTPPQPDTLA"
BASE COUNT          244 a          331 c          333 g          262 t
ORIGIN      
        1 ctcacgacag tacttcctaa gacctgcaac tttctcttct gacttttccg ttcgtcatcc
       61 gaagcggcca tccaagcggg cgagcggctg atggtccatg aaagtacgtg aaacgaaaga
      121 agttttggca acgatttcgt ctgcctgtcc ctccaggcat gactggcatg gaggtacacc
      181 gggttccagc aagttctagg ttgctcaaac aggcttggaa gcgtgagacc tcatagccaa
      241 aagctcttta atcataagca ctttcatggg tatttcgcct ggagcccgca tgaatcctgg
      301 ctgtgcacac agagcggaaa agtcagggtc ttacgcgcat ggcatgaagt taagcctaca
      361 acagagtcac aattgcgaag ttattgaact gtaagtatct gaatttacga tagcctcacc
      421 tttcggcttt tcttaacttc atgccattcg gctcttggcc gcttttggtg cagtggaacg
      481 cgcgggcacc tgagagaagg caatggcacc ctcaccgtca aggtgccgca cggcaagggg
      541 ctaggccagc gtgtcgggtt ggggtggcgt actgcccgcc tccagacgct cgacccggcg
      601 ccgtaagctc tccaacatca gcgtgtgctg atccgcgatg agatacaagt ggcggatcac
      661 cgcggccata tcgcctgagg gatccgtggg cgagagtgcc cggagttcgg cgccgacctc
      721 ttccatgtgc cgtgaggtgt ctgccaggcg ctgagcccct tcttcgttgg acatggactg
      781 tgggtcaagg ggttctgcca tcaggccttc tccttcccga gttgatggaa cggtgtaggg
      841 catacccata gaggtctggg ctgagtatac aggagcgcgt ggggggatga acagggggcc
      901 gccccggcgc tcaccacggt atggccgcgc tcggctcgat ctgccggccc gacgcttcct
      961 gctggcggcg tgaacaggca ccggccatcc atgactccga gcccgcccct acactcgcac
     1021 ggcctctgcc tcaccaaatc tggccaagag ccatacattt gccaaaatat gttataacct
     1081 aaaggcttag ggtcttttta tgccacttgc tccataggga gaagagtgac tgcgtagcct
     1141 aagcgctgga atacctcttt gacgtgttca
//
LOCUS       DASQSL010002061         1188 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_54554, whole genome shotgun sequence.
ACCESSION   DASQSL010002061 DASQSL010000000
VERSION     DASQSL010002061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1188
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54554"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            36..>1188
                     /locus_tag="VE844_20760"
     CDS             36..>1188
                     /locus_tag="VE844_20760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03682.1"
                     /translation="MCPRFERMHQLGGSAHFDRDDYEISTFPVLYSLRDLPTIKLSQT
                     LNRLLAIIESDCYKASELLSKAIGKEVFAVPNNIHISKSSTNHEPHHNYQPIGVLERG
                     FVAERITYDQITKSRVPNVRTTRTKFRKEILTVYRLDLEVEVARDVLSDIEGDLLDLS
                     EVYSNDRVIEQAWSEYHALPTSTLLANYRQAWFNLALSTLEYVEHWNWDLEWNTVVAL
                     RKINKITVGGWDVPIHGERSFRDLLRLLLSKQEFQRALLKNGPLGDYLLIKAVAEGFI
                     DHSPYRTDELIRLEGEVPIVDDLMIHALGEDYMASRETFEVPPSIPTTLDVLDISYKT
                     EPSSVSAGMGTKYAVVFRQRGKPKGPERIIPLHQVEAIQQAVEIGQACKG"
BASE COUNT          292 a          344 c          315 g          237 t
ORIGIN      
        1 tcggggaacg gattctcgcc aaagatcacc tccgcatgtg ccctcggttt gagcggatgc
       61 accaattggg gggctccgcc catttcgacc gggacgacta cgagatttca acctttcccg
      121 tcctctatag cctccgggat ctcccaacca ttaagctcag ccaaaccttg aaccgcctcc
      181 tcgccatcat cgaaagtgac tgctacaaag cctccgaact actctcgaaa gccatcggca
      241 aagaagtatt cgcggtaccg aacaatatcc acatcagcaa gagcagtacg aaccatgagc
      301 cacaccacaa ctatcagccg attggagtac tcgagcgagg ctttgtcgcc gagcgcatta
      361 catacgatca aattaccaaa tcccgcgtac ccaatgtgcg cacgacacgc accaaattcc
      421 gcaaagagat cctcacggtc taccggctgg atctggaagt ggaagtcgcc cgagatgtcc
      481 tctccgacat cgagggggac ttactcgacc tgtccgaggt ctatagcaat gacagggtca
      541 ttgagcaagc ctggagtgag taccacgcgc tgccaacgtc tacgctcttg gcaaactatc
      601 ggcaggcctg gttcaacctg gcactgtcca cgctcgagta cgtcgaacac tggaactggg
      661 atctggagtg gaacaccgtg gtcgccctgc gtaagatcaa taagatcacg gtcgggggat
      721 gggatgtccc cattcacggc gagcggtctt ttcgtgactt attacgcttg ctgctgagca
      781 agcaagaatt tcaacgggca ctgctgaaaa atggcccgct gggtgactat ctcctgatca
      841 aggctgtcgc tgagggcttt attgaccaca gtccttaccg cacagatgaa ctcatccgtc
      901 tggaaggaga agtaccgatt gtcgacgacc tgatgatcca tgccttgggc gaagactaca
      961 tggcctcacg ggaaacgttc gaggtgccgc ccagcatccc aaccacactg gatgtcctgg
     1021 acatcagcta taagacagaa ccttcgtcag tgagcgccgg gatgggaacg aaatatgcgg
     1081 tggtgttccg tcagcgcggt aagcccaagg ggccggagcg gatcattccc ctccaccagg
     1141 tggaagccat tcaacaggca gttgagatcg gacaggcgtg taaggggc
//
LOCUS       DASQSL010002062         1665 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_202377, whole genome shotgun sequence.
ACCESSION   DASQSL010002062 DASQSL010000000
VERSION     DASQSL010002062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202377"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(68..1456)
                     /locus_tag="VE844_20765"
     CDS             complement(68..1456)
                     /locus_tag="VE844_20765"
                     /inference="COORDINATES: protein motif:HMM:NF033572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISKra4 family transposase"
                     /protein_id="HZC03683.1"
                     /translation="MRARKQWVALRHSLHDRFDEWLDQLEAQLPEPETTLAHVTETMW
                     NLRQELTGGLTETLVDHAHQVELRRQQLVCTTCDRLLAARPAVSRTVDTMVGSVQLER
                     PYFYCRHCQQGTSPLDDVLDLTPGRKQLDVQQAAARVVVDTPYDEAQTLFRDLTGVHI
                     GSERMHTLTNQAAEGLTVLDVAPSREEIARRIAEVSAGQWRRPVVVLGIDGAYAPTRP
                     DSARGRRPGQGRYRARRPRWTGQWRETKGFRFYLLDGDRIVQLLSWHQVQSEAQVGQA
                     LKQVKEAGLIPEDQVRLCVVGDGASWIWKYIPSGFPQARQVLDYYHCAQYLHKVAKAH
                     YGDSVQALHWVEATLTRLYLGHVVAVLGGLRRMQAHSEEAAKAIANCWAYLDEHRHRT
                     SYRQLRKGGYPLGSGGIESSNKFICHVRLKRSGAWWYEKNSNQMLALRCAKYNGTFNQ
                     VFVRYRQRLREV"
BASE COUNT          325 a          521 c          466 g          353 t
ORIGIN      
        1 tctgggtctc gtttaactcc gtatccagca gaagtcccgt ctggacatca cgagcattcg
       61 accattctta cacttctcgt aatcgctgtc tataacgcac aaacacttgg ttgaacgtgc
      121 cattatactt ggcacagcgt agcgccaaca tctgattgct gttcttctca taccaccagg
      181 ctcccgagcg cttgagccgc acgtgacaga tgaacttgtt ggacgactca atccctccgc
      241 tgcctaacgg atagccgcct ttgcgcaact ggcgatagga ggtccgatgc cgatgctcat
      301 cgagatacgc ccaacaattc gcaatcgctt tggccgcctc ctcggagtgc gcctgcatac
      361 gcctcaagcc cccaagcacc gcgaccacgt ggcccagata cagccgtgtt agggttgctt
      421 caacccagtg cagggcctgc accgagtcgc catagtgcgc cttggccacc ttgtggaggt
      481 actgcgcgca gtggtaatag tcgagcacct gacgcgcctg gggaaaccca gaggggatat
      541 atttccatat ccacgaggcc ccatcgccga ccacgcaaag tcgcacctga tcttcgggga
      601 tcaagccggc ttccttgacc tgtttcaggg cctggccgac ttgcgcctcg ctttgcacct
      661 ggtgccaact gagcagctgc acgatgcgat cgccatcgag cagataaaag cggaagccct
      721 tggtctcgcg ccactgaccc gtccaccgag gtcgtctggc ccggtagcgt ccttgcccag
      781 gacggcgccc ccgggcactg tcgggacgcg tgggggcata ggccccatca atgcccagca
      841 ccacgaccgg tcggcgccac tggccggctg acacctcggc aatgcgccgc gcgatctcct
      901 cgcgcgacgg cgctacatcc aataccgtga ggccttcggc ggcttgattc gtcaacgtgt
      961 gcatccgctc actgccgatg tgcactccgg tgagatcgcg aaataacgtc tgcgcctcat
     1021 cgtagggtgt gtcaaccacc acccgggccg ccgcctgttg gacatcgagt tgtttgcggc
     1081 caggggttaa atccaacacg tcatccagcg gggacgtccc ctgctggcaa tggcgacaat
     1141 aaaaataggg gcgctccagc tgcaccgacc ccaccatggt gtcgaccgtg cgcgacacgg
     1201 ccggccgggc cgccaagagg cgatcacatg tcgtacaaac cagctgctgg cgtctcaatt
     1261 cgacctgatg ggcgtgatcg acaagcgttt cggtgagccc accggtgagc tcttggcgca
     1321 agttccacat cgtctcggtg acatgcgcta aggtcgtctc gggttcggga agctgggctt
     1381 ccaattgatc gagccactca tcaaagcgat catgaagtga atggcgcagg gccacccact
     1441 gttttcttgc acgcacctcg gataaccaga taatctcagc ctggcccagg gggagtcctt
     1501 tctgataggg gagatacaga acctcatttc cctagtatag aaaggttccc tatggggtgt
     1561 aagaatcacc gaatgctcat atagcgcgtt gggcgtcttg ttgctggcgt tggtgtcggg
     1621 ctttggcact cagtcggctg cggcgtttcg ctttggtttg ttttt
//
LOCUS       DASQSL010002063         1019 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_95227, whole genome shotgun sequence.
ACCESSION   DASQSL010002063 DASQSL010000000
VERSION     DASQSL010002063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95227"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..320
                     /locus_tag="VE844_20770"
     CDS             <1..320
                     /locus_tag="VE844_20770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011872193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZC03684.1"
                     /translation="ERVLGMDPVVFGEGRNALAFGTQKINLHEAGREFEPKAATPTPG
                     SADLCFLTNSSVVEVVEHLEANSVEIIEGPVRRTGATGPITSVYFRDPDGNLLEVSNR
                     LGE"
     gene            757..825
                     /locus_tag="VE844_20775"
     tRNA            757..825
                     /locus_tag="VE844_20775"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:786..788,aa:Ala,seq:tgc)
BASE COUNT          233 a          277 c          308 g          201 t
ORIGIN      
        1 acgagcgggt gctcggcatg gatcccgtag tctttggcga gggtcgcaac gccctagcgt
       61 tcggcacgca gaagatcaac ctccacgaag cgggccggga gttcgagccc aaagcggcca
      121 cgcccacccc aggttcagcc gacctctgct tcctcacaaa ctcgtcggta gtcgaggttg
      181 ttgaacactt ggaggccaac agcgtcgaga tcatcgaagg acccgtgagg cgcacggggg
      241 ctaccgggcc gataacgtcc gtgtacttca gggaccccga cggaaacctc ctcgaggtct
      301 ccaatcgcct gggagagtaa ctgactgccg tcaacctgtt cgcggatcta ctcgacagaa
      361 ctgcacgaca tacacctaca gcggaattca aaagcattga cccgggtgag atcgtggggt
      421 aagtgcgagc tgtcacttcg tagcccccga gcacctcaag ccggttcgat cgttatgacg
      481 aatgctgtag tgggccgttt gtcgttggcg tgggtatcta gacgcataag ggtattctgc
      541 gagcctctcc gcaacttcgc taggagagct tcatgacacg ccgccagagg gcccgcagta
      601 ggttcataaa ggtgtgtagc cgagagatcg agagcactcc gtttgtgcag caaccgtgca
      661 gcaacctgag tgaatcgtct gaaatactgg gaaaagtgct gacgcagaaa tacgccgcag
      721 aaatacgcgc ttttgcaggc attttgcaag caccagaaag ctggggcaaa gtattgtgcc
      781 gcctttgcac ggcggaggtc aggggttcga ctcccctcgg ctccactaat aaatgtgcag
      841 atctgtaggt aaaacaacca gaggaaagtc gtttccggag tagctccgtg gcacagcagt
      901 tctatctatc agtctgagat tcatcgccga ttcatcgtcg ccggatacgc tgatcgggca
      961 gtgtagggcg aaaggggagc tctcggtagc ttcccggcag gaggaggtag atggcgcgg
//
LOCUS       DASQSL010002064         1068 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_54585, whole genome shotgun sequence.
ACCESSION   DASQSL010002064 DASQSL010000000
VERSION     DASQSL010002064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54585"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..666)
                     /locus_tag="VE844_20780"
     CDS             complement(<1..666)
                     /locus_tag="VE844_20780"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012874332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HZC03685.1"
                     /translation="MESNVHLLVSGPRRKRSIAAVSSFIEAHEGYILEVDEHLNPPES
                     GRWFMRVEIKGQGFDLGREEDFTSAFAPVAREYGMEWRVSYTDRPKRMAILVSKYEHC
                     LLHLLWRWDAGELHAEIPLVVSNHPDLAPRAETYGIPFYHLPVTPESKEEQESQVREL
                     LADHGIDFIVLARYMQILTPDFVDAYPNRIINIHHSFLPAFAGADPYKQAYERGVKII
                     GATA"
BASE COUNT          228 a          295 c          292 g          253 t
ORIGIN      
        1 agcggttgcc ccgattatct tcacgcctcg ctcgtaagct tgtttgtaag ggtcggcccc
       61 ggcaaaggcc ggcaggaagg agtggtggat attgattatc cggttcgggt aggcgtccac
      121 gaagtcggga gtgaggatct gcatgtagcg cgctagcacg atgaagtcta tgccgtggtc
      181 ggccaggagc tctcttacct ggctctcttg ctcctccttc gactcgggcg ttacgggcag
      241 atggtagaac ggaataccgt aggtctccgc tcgcggggcg agatctggat ggttagagac
      301 cactaggggt atctccgcgt gcagttcacc ggcgtcccag cgccacagca ggtgcagcag
      361 acaatgctcg tacttcgaga ccagaatcgc catgcgcttg ggccggtcgg tgtaagaaac
      421 gcgccattcc ataccgtatt cacgcgccac aggagcgaag gccgatgtaa agtcttcttc
      481 ccggcccagg tcgaaacctt ggcctttgat ctctacccgc atgaaccatc taccgctttc
      541 gggaggattt aggtgctcgt caacctccaa gatgtaacct tcgtgtgcct cgataaagga
      601 cgagacggcc gcgatcgatc tcttgcgtct cggaccacta accaaaaggt ggacgttgct
      661 ttccatacgt tacagaacct actccttaat ctgccaaatt accgtgccct ggatcccttc
      721 gacctgtgcc tggagagctt taccatggtg ccgtcgattg cggagacgtt ctccttccgg
      781 aaacggttgt tccgcccacg cgattttcct ccttacccgt gccttatgca tttctttgta
      841 tctccttact acattccggt caacccgcac gttcggtaat cccgaacgta ccgtttcgaa
      901 gcgtgggctg ttgcaagggt ttagctacaa gaaaaatgac cgacgcgtcc ggcaatgccg
      961 aacacgctac ttgctgcaaa tccgacgatt ctatatatga ggattcagct gaagggtata
     1021 tgagaatcag gtgagggaaa gggtgtaaag aagcagctac cgatactg
//
LOCUS       DASQSL010002065         1042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_174550, whole genome shotgun sequence.
ACCESSION   DASQSL010002065 DASQSL010000000
VERSION     DASQSL010002065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1042
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174550"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            60..>1042
                     /locus_tag="VE844_20785"
     CDS             60..>1042
                     /locus_tag="VE844_20785"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HZC03686.1"
                     /translation="MLKTASVLNRLDNGTSKWISVGSICVLGLVMRLACTTGLIASDD
                     LGYSHYARLISQYLYVPELHHYAIRYGLIIPVAGVYWLLGVGEWTTILVPLLTSVASV
                     PLLIAIGTKLFDLRTALIAGLLFATFPVQLRLATMLLPEPVAEFYILVAVLVYLHGEG
                     QHSLGLSIASGICVGVAYLTKEPAVFVAPALMIDAVARRQWRAVLGITSGLAVVVAAE
                     HVYYLALTGDLLFRPHAMVGHNRHPMTLAANENLYKRLLITYPYSMLLPNRSFGLHSV
                     VSLAFIVPGWFLLRADRFRLLILWAILPWLYLNFGSSSLTNYFALPVAPRY"
BASE COUNT          202 a          288 c          288 g          264 t
ORIGIN      
        1 gacagggcgg acggatacgt gcccttggtc cgggcgaagg taagagcaag ggtacgaaca
       61 tgctgaagac agcctcagtc ctcaatcgct tggataatgg cacgtcgaaa tggattagcg
      121 tcgggtccat ttgtgtcctc ggcctagtga tgcgcctggc ctgtaccacc gggctgatcg
      181 cttccgatga tctggggtac tcccattacg cacggctaat ttcgcaatat ctctacgtac
      241 ccgaactgca ccactacgcg atccgttatg gactaatcat tccagtggca ggagtctatt
      301 ggctgttagg tgtgggagag tggacgacca tcctggtgcc attgctcaca tccgtggctt
      361 cagtgccctt actaatagcg attggaacga agttgtttga tcttcgcacc gcgcttatcg
      421 ctgggctctt gttcgcgact ttccccgtac agctgcgcct cgcgacgatg cttctgccgg
      481 agccggtggc agaattctac attctggttg cggttctggt ttacttgcat ggagaaggcc
      541 agcattcact ggggctgagc atcgccagcg gcatctgcgt gggagtggcc tatcttacga
      601 aggagcctgc cgtattcgtg gctccagcac tcatgattga cgcagtggcg aggcgtcaat
      661 ggcgagcagt tctgggcata acaagcggcc ttgccgtggt ggtcgcagct gaacacgtgt
      721 actacttggc tctcactggc gacctgctgt ttcgtcccca cgctatggtc gggcacaatc
      781 gacacccaat gaccttggct gcaaatgaaa acctttacaa gcgcctgttg ataacctacc
      841 cgtatagcat gctcctgccg aacaggagct tcgggttaca ctcagtggtt tcccttgcct
      901 tcatagtgcc cggatggttc ctgctcaggg ccgatcgatt caggctcctt atcctctggg
      961 ccatactgcc ttggctgtat ctcaatttcg gaagctcaag tctcacaaac tattttgcgt
     1021 tgccagtggc gcccaggtat at
//
LOCUS       DASQSL010002066         1089 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_109526, whole genome shotgun sequence.
ACCESSION   DASQSL010002066 DASQSL010000000
VERSION     DASQSL010002066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109526"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..428
                     /locus_tag="VE844_20790"
     CDS             <1..428
                     /locus_tag="VE844_20790"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006590967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HZC03687.1"
                     /translation="SVLLFPPLDEFFMENVFSWVPGWFLFAEDFSQYSTAALLITWIF
                     GLVVNGIAAPVVEEMYFRGYLLPRISRLGAWAPLVNTVLFSLYHLFTPWLNVGRIAID
                     RRTRRRPVYAGSAVVLEAQPRGLGQSSRTSPSACVYGLR"
     gene            complement(564..>1089)
                     /locus_tag="VE844_20795"
     CDS             complement(564..>1089)
                     /locus_tag="VE844_20795"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HZC03688.1"
                     /translation="LRLSDLQSKGSELGLDLEEELEALGRATLGLRNAVNDLRDEKER
                     PFVKSVESLVELNRRLAPDCNIELLVEDGFPNGLLGEAGVELLRVIREAFTNTRYHSG
                     AKTVVVTLKVEGSDLVVEISDDGQGFELETTPGMGLSSMQERVAMVDGKLEIESKVGR
                     GTSVRLRVPVPQTG"
BASE COUNT          204 a          350 c          283 g          252 t
ORIGIN      
        1 gctctgtact cctgttcccg ccgctggatg aattctttat ggagaacgtg ttctcctggg
       61 tgcctgggtg gtttttgttt gccgaggact tctcccaata ctctacggcg gccttgctca
      121 tcacgtggat cttcgggttg gtcgtaaacg ggatcgccgc tccggtggta gaggagatgt
      181 acttccgcgg gtatttgctg ccgaggatct cacgtcttgg ggcgtgggcg ccgctggtga
      241 acacggtgct cttctcgctc taccacttgt tcacaccttg gctgaacgta ggccgcatcg
      301 cgatcgaccg gcgaacccga agaagacccg tctacgctgg ttcagccgtg gtgcttgaag
      361 cgcagccacg tggtctagga caatcaagtc gaacctcgcc atcggcgtgc gtatatgggc
      421 ttagataaga tactcagtct gagcgatcac ctcaagactg aggtccggtc gccaacccag
      481 caaggccgcc atgaggcaac cgaatttggt ctgatgttcg ataaggatga cacggccccg
      541 cgttgcgata tctgccccag cacctatcct gtctgtggta ccggaacccg taggcggaca
      601 ctcgtccccc gccccacctt gctttcgatc tctaatttac cgtcgaccat agcgacccgc
      661 tcttgcatgc tactcagacc catgcccggt gtggtctcca attcgaatcc ctgaccgtcg
      721 tctgagatct cgaccaccaa atcgctacct tctaccttta gggtcaccac gacggtcttt
      781 gcccccgagt ggtaccgagt gttggtgaac gcctcccgaa tgacgcgcaa cagctccacg
      841 cctgcctctc cgagaagccc gttcgggaac ccatcctcga ccagcagctc tatgttgcag
      901 tcgggtgcca accggcggtt aagctcaacc aacgattcga cagactttac gaagggccgc
      961 tccttttcgt ccctgaggtc gttaacggcg tttctcaaac ccaaggtcgc ccgccccaaa
     1021 gcttccagtt cctcctcgag gtccagccct aactccgaac ccttgctctg caggtcggaa
     1081 agcctcaac
//
LOCUS       DASQSL010002067         6410 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_174596, whole genome shotgun sequence.
ACCESSION   DASQSL010002067 DASQSL010000000
VERSION     DASQSL010002067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 6410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6410
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174596"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2374)
                     /gene="pheT"
                     /locus_tag="VE844_20800"
     CDS             complement(<1..2374)
                     /gene="pheT"
                     /locus_tag="VE844_20800"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012970204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HZC03689.1"
                     /translation="MRFSERWLREWVNPPISTERLVEQLTLAGIEVDSVTPVAPRFSG
                     VVVAKVLEVRPATDHLKRCRVDAGRGAPVTVVCGAANVREGLCVALACIGARLPGRPA
                     PIQCSMVRGVASEGMLLSSAELGLTDAAEALLELPQDAPLGHDLWALLALDDAAIEVD
                     LTPNRGDCLSVAGIAWEVSVLNQYPVTGPLIRPVAATIEDTFAVEILAPAACPHYAGR
                     LIRGIDPTAPTPLWMQERLRRSGVRSISAVVDITNYVMLELGQPMHAFDLKRLQGGIR
                     VRWATEGETLTLLDGQTLRVEANTLVIADQARAIALAGIMGGLETAVTEHTREVFLES
                     AFFSPEAMAGQARRYHLQTESSHRFERGVDFELQARALERATKLLTTICGGQPGPVIE
                     HRSAEQLPQRVPILLRASRITRVLGMQIADATVSGQLEQLGMRVESDKTAWRVTPPSF
                     RFDVTIEADLIEELARIAGYDRIPSHLPQRRLKSQHQPETRLSLSRIRQRLVDRGYHE
                     VITYSFVDGAIQARIEPYQAGLMLANPISSELGVMRTSLWPGLIQALHYNQNRQCERI
                     RLFESGLVFIPGEGGDLYQQNRIGGIVAGPAYPQQWGIPSRPVDFFDLKGDVEAMLAL
                     TGPSTAYRFEPVEHPALHPGQAAQIQVHGRTLGLMGALHPALIRELSVEGPVFLFQME
                     LEGISQGELPAFRPLSKFPWVRRDISIVLDRDIPASEVIQCLRKDLPEAVKDLQLFDL
                     YEGEGIDFGKKSLALGLIFQGTSSTLIERDIETIVGHLTLRLSHELGAQLR"
     gene            complement(2379..3404)
                     /gene="pheS"
                     /locus_tag="VE844_20805"
     CDS             complement(2379..3404)
                     /gene="pheS"
                     /locus_tag="VE844_20805"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013034105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HZC03690.1"
                     /translation="MIELVEKAAAKAQQAIETAADLKALEELRVRLLGKKGQLTALLK
                     QLGRLPPDQRPRAGKAINEAKEKVTQALAVRREHLYQTGLAQALAVERIDVTLPGRGE
                     QPGGLHPITRTLERMVSLLVQMGFEVVEGPEIEDDYHNFEALNIPPHHPARALHDTFY
                     FDAHRLLRTHTSPVQIRVMKSRRPPLSIIAPGRVYRCDSDLTHTPMFHQIEGLMVDEE
                     VSFADLKGLLEDLFRKFFENEALQVRFRPSYFPFTEPSAEVDIQCVMCAGQGGCRVCK
                     DSGWLEVLGCGMVHPNVFAKLGIDNEHYTGFAFGLGVERLTMLRYGINDLRLFFENDL
                     RFLAQFH"
     gene            complement(3461..3820)
                     /gene="rplT"
                     /locus_tag="VE844_20810"
     CDS             complement(3461..3820)
                     /gene="rplT"
                     /locus_tag="VE844_20810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009118009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HZC03691.1"
                     /translation="MPRVKRGVTARARHKKVLAQAKGYVGRRKNVFRVAKQAVTKAGQ
                     YAYRDRRQRKRHFRGLWIVRINAAARQCGLSYSRFMDGLKKAAIEIDRKVLAELAISD
                     QAAFAQLAERAKAAAAG"
     gene            complement(3839..4036)
                     /gene="rpmI"
                     /locus_tag="VE844_20815"
     CDS             complement(3839..4036)
                     /gene="rpmI"
                     /locus_tag="VE844_20815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002808743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HZC03692.1"
                     /translation="MPKLKTNRGAAKRFKPTASGRFKHRQSFKNHILTKKSTKRKRQL
                     RGLITIKDVDEGTIQRMLPYS"
     gene            complement(4084..4602)
                     /gene="infC"
                     /locus_tag="VE844_20820"
     CDS             complement(4084..4602)
                     /gene="infC"
                     /locus_tag="VE844_20820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012970200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HZC03693.1"
                     /translation="MVAEKKHRINNAITGPMVRLIGPEGDQIGVVSIKEAQRVAEEHD
                     LDLVEIVPNAEPPVCRVMDFGKFLFEQTKKRHAQKKRQKQIQVKEIKFRPATDEGDYQ
                     IKLRNLIRFLTQGDKVKVTLRFKGRELAHQDLGVRMLKRIEADLSSLGAVEQFPRLEG
                     RQMVMVIVPKKA"
     gene            complement(4606..>6410)
                     /gene="thrS"
                     /locus_tag="VE844_20825"
     CDS             complement(4606..>6410)
                     /gene="thrS"
                     /locus_tag="VE844_20825"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011628517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HZC03694.1"
                     /translation="SKLVDTSYVIDKDCALTIITPKDPEGVEVLRHSCAHLLAQAVKT
                     LFPSAQVTIGPVIEDGFYYDFAFGRPFTPEDLAAIEAKMQELARQDLPVRRSVMSRDE
                     AVALFRQMGEEYKANIIAAIPENEAISLYHQGEFIDLCRGPHVPSTGKLKAFKLTKVA
                     GAYWRGDPNNEMLQRIYGTVWPDKEALNDYLSRLEQAEKRDHRKLGRQLNLFHMQPEA
                     PGMVFWHPKGWTLYRQIQTYIRSKLCERGYEEVRTPEVVDRVLWERSGHWDKFREVMF
                     TTHSENRDYAVKPMSCPGHVQIFNQGIKSYRDLPLRLAEFGSCHRNEPSGTLHGLMRV
                     RHFVQDDAHIFCTEDQLQGEVAAFIDLLFEVYADFGFADIIIRLSTRPLQRVGSEAVW
                     DKAEQALALALDNKGLKWALQPGEGAFYGPKIEFSLRDCIGRVWQCGTIQVDFSMPER
                     LGAHYITEAGNRQTPVMLHRAILGSLERFIGILIEEHAGALPLWLAPVQAAVLTITDK
                     QAEYAESVTERLKIQGLRVISDLRNEKIGLKIREHTLQRVPYLLIIGDREAKENTLAV
                     RARNGQDLGTPAVEHVAERLKAEIAHYGRTSMEE"
BASE COUNT         1371 a         1957 c         1681 g         1401 t
ORIGIN      
        1 ttctcaactg tgcccctaac tcgtgagaga gtctcagcgt aagatgccct acgatagtct
       61 ctatgtctct ctctataaga gtgctcgaag ttccttgaaa gatcaagccg agtgcaagac
      121 ttttttttcc gaaatcaata ccttctccct catacagatc aaataactga agatccttca
      181 ccgcttcggg gagatccttc ctaagacact ggatcacttc ggaggccggt atatcacggt
      241 ctaaaacaat actgatatca cgccgcaccc aggggaattt agataagggc ctaaacgccg
      301 ggagctcacc ttggctaatc ccctcgagct ccatctgaaa tagaaagacc gggccctcga
      361 cactgagttc ccggatcagg gcgggatgca gggcccccat taaaccgagg gtgcggccgt
      421 gcacctgtat ttgggcggcc tgtcccggat gcagcgccgg atgctctaca ggttcaaatc
      481 ggtaagcggt ggacggcccg gtcaatgcca gcatcgcctc cacatcccct ttgagatcga
      541 agaaatcgac cgggcggctc ggtatacccc attgttgtgg ataagcgggt ccagccacta
      601 taccgcctat cctattttgt tggtataggt cccccccctc tccagggata aacaccagcc
      661 cgctctcaaa cagacgaatg cgctcgcact ggcgattttg attatagtgt aatgcctgga
      721 tgaggccagg ccagaggctt gtgcgcatca ccccaagctc gctcgagatg ggattggcca
      781 gcatcaatcc cgcttgatag ggttcaatcc gcgcctggat cgcgccatca acgaaactat
      841 aggtgattac ttcatgatag ccccggtcaa cgagccgctg gcggatccgg gacagactga
      901 gtcgggtttc gggctgatgc tggctcttga gtctccgttg gggaagatgg ctcgggatac
      961 gatcatagcc ggcaatgcgc gccaattcct cgatgagatc ggcctcaatc gtaacatcga
     1021 accggaacga aggcggggtg acgcgccagg ccgtcttatc cgattccacc ctcatcccca
     1081 attgttcgag ctgcccgctt accgtcgcat cggcgatctg cattccaagc acgcgggtga
     1141 tgcgggaagc ccgcagtaag atcggcaccc gttgcggaag ctgttcggca gaccgatgct
     1201 caatcacggg cccgggctgc ccgccgcaga tagtcgttaa caacttggtc gcccgctcca
     1261 aggcgcgggc ctgcaactca aaatccaccc cccgctcaaa gcggtgggat gactcagtct
     1321 gcaggtggta acggcgtgct tgcccggcca tggcctcagg gctaaagaag gcgctctcga
     1381 gaaacacctc ccgggtgtgt tccgtaaccg cggtctcaag cccgcccatg atccccgcca
     1441 gggcgatcgc gcgcgcctgg tcggcgatca ccagggtatt ggcctctacc ctgagcgtct
     1501 ggccatccaa taaggtcaga gtctccccct cggtcgccca gcgaacccga atgccccctt
     1561 gcaacctttt gagatcaaag gcgtgcatag gctggcccaa ctccagcatc acatagttgg
     1621 tgatatcgac gactgcgctg atcgaacgga ccccgcttcg gcgcaaccgt tcctgcatcc
     1681 aaagtggtgt gggggcagtg gggtcgatac ctcggatcag gcggccggca taatggggac
     1741 aggctgcagg tgctaagatc tcgaccgcaa aggtgtcctc gatagtggcg gcgaccggtc
     1801 tgatcagcgg ccctgtgacc ggatattggt ttaatacgct cacctcccag gctatacccg
     1861 ccacacttag acaatcgcct cgattgggag tgagatccac ttcgatggcc gcatcgtcga
     1921 gcgcgagcaa agcccataga tcgtgcccca gcggggcgtc ttgaggtaac tccaggagtg
     1981 cttccgcagc gtcggtcaaa ccgagctctg cgctggagag aagcatgccc tccgaggcta
     2041 ctccccgcac catagagcat tggatcggtg cgggccgacc cggcaatctg gcgcctatac
     2101 atgccagggc aacacacaaa ccttcgcgca cattggctgc gccacacacc acggtcaccg
     2161 gcgcacctct gcctgcatcg actcgacagc gcttcaagtg atcggtcgcc ggccttacct
     2221 ccaacacctt cgccaccacc acaccactga aacggggtgc gaccggcgtt actgaatcga
     2281 cctcgatccc cgccagggta agctgctcta ccagtcgttc cgtggatatc ggtggattaa
     2341 cccactcccg cagccagcgt tcgctgaatc tcatcggctc aatggaactg cgccaaaaac
     2401 cttaagtcat tctcaaagaa caaacgtaag tcgttgatgc cataccgcag catggtcaag
     2461 cgttctaccc caagcccaaa ggcgaatcca gtatagtgct cattgtcgat gccgagcttg
     2521 gcaaagacgt tgggatgcac catgccgcat cccaagacct caagccaacc gctgtctttg
     2581 catactcggc agcccccctg gcccgcacac atcacacact ggatatcaac ctctgctgaa
     2641 ggctccgtga atgggaaata agaggggcgg aaacgcactt gcagcgcttc gttctcgaaa
     2701 aacttgcgga acagatcctc caacaagccc ttaagatcgg cgaagctaac ctcctcatcc
     2761 accatcaagc cttcgatctg gtgaaacatc ggcgtatggg ttaaatcgga atcacaacgg
     2821 tatacccgcc cgggcgcaat gatgcttaaa gggggcctac ggctcttcat cacccggatc
     2881 tgaaccggtg aggtatgggt tcgaagcagc ctatgggcgt cgaagtaaaa ggtatcatgc
     2941 agggcgcggg cgggatgatg gggcgggata ttgagggcct cgaagttgtg gtaatcatct
     3001 tcgatctcag gcccctccac cacctcaaag cccatctgca ccagcaaaga caccatgcgc
     3061 tcgagggttc gagtgatggg atgcagaccc cccggctgct caccccggcc gggcagagtg
     3121 acatcgatgc gttccaccgc gagcgcctgg gcaagcccag tctgataaag atgttcacgc
     3181 cgcaccgcca gcgcttgggt tactttctct ttggcctcat tgatcgcctt gcccgctcga
     3241 ggccgttggt cgggtggcaa gcggccaagc tgttttaaca aggcggtcaa ttgacccttt
     3301 ttaccgagca agcgcacgcg gagctcctca agcgccttga gatccgctgc agtttcaatc
     3361 gcctgctggg ccttggcggc ggccttctct acgagctcaa tcatggaacg ctgtcataca
     3421 cccgggagtc cccccggcca gggttttcga cagatcgcct ttatcctgcc gcagccgctt
     3481 ttgcgcgctc cgccaattgg gcaaaagccg cctgatcgga gattgcaagt tccgccaaaa
     3541 ccttccggtc aatctcgatg gcggcttttt taagcccatc cataaaccgg ctgtaagaca
     3601 gcccgcattg ccgggcggcc gcattgatcc gaacgatcca aaggcctcgg aaatgccgtt
     3661 ttcgttgccg gcggtctcga taggcatatt gaccggcctt ggttacggct tgtttggcca
     3721 cgcgaaagac attcttgcgg cgccccacat aacctttggc ctgcgccaga accttcttat
     3781 gtctggcgcg ggccgtcact cctcgcttta ctcttggcat atcgatttcc ctcgcaattt
     3841 atgaatacgg cagcatccgc tggatggtcc cttcatccac atccttgatg gttatcaggc
     3901 cccgcaattg gcgttttcgc ttggtcgact tcttggtcag gatatggttc ttgaaagact
     3961 gacgatgctt gaatcttcca gaagccgtgg gcttgaaacg cttggccgca ccacgattgg
     4021 tttttagctt aggcacgttg acctgctcct aaaattcaat tccaaagatc attcttgccg
     4081 gccctaggcc ttctttggca cgatcaccat gaccatctgg cgcccttcaa gcctggggaa
     4141 ttgctcgacc gcccctaagc tcgaaagatc ggcctcgatc cttttcagca tgcgtacgcc
     4201 gagatcctga tgcgcaagtt cccggccttt aaagcgcaag gtcaccttga ccttgtcccc
     4261 ctgcgttaag aatcgaatca gattgcggag tttgatctga taatcccctt catcggtcgc
     4321 aggccggaac ttgatctctt ttacctggat ctgtttttgt cttttctttt gggcatgacg
     4381 ctttttagtc tgctcaaaca gaaacttgcc aaaatccatg acccggcaga ccggcggttc
     4441 cgcattcggc acgatctcca ctagatctag atcatgctcc tcagcaacgc gttgtgcctc
     4501 ctttatggaa acaacgccta tttgatcgcc ctccggtcca ataagtctta ccatagggcc
     4561 agtaatggcg ttatttatgc gatgcttctt ttctgcaacg ataccttatt cctccatact
     4621 ggtacggcca taatgggcaa tctcggcttt gagacgttcc gcaacatgct ctacagccgg
     4681 cgtgccgaga tcctggccgt tacgcgcgcg cactgccagt gtattctctt tcgcctcccg
     4741 atcgcctatg atcagcaggt agggtacccg ctgtaaagtg tgctcgcgga ttttaagccc
     4801 gatcttttca tttctcaagt ccgagataac ccgtaagccc tgaattttta agcgttccgt
     4861 tacgctctcg gcatactccg cttgcttgtc ggtgatggtc aataccgccg cctggacggg
     4921 cgcgagccaa aggggcaagg caccggcgtg ttcctcgatc aggataccga taaaacgttc
     4981 aagggaacct aaaatcgccc gatgaagcat caccggggtc tggcggttcc ctgcctcggt
     5041 gatatagtgc gcgcccagac gctccggcat agaaaaatcc acctggatcg tgccgcattg
     5101 ccacacgcgc ccgatacagt cccgaagcga gaattcaatc ttggggccgt aaaatgcccc
     5161 ctcaccgggc tgcagcgccc atttcagtcc tttattgtcg agggcgagcg caagcgcctg
     5221 ttcggccttg tcccagaccg cctcactacc cacacgctgg agagggcgag tcgacaggcg
     5281 gataatgatg tcggcaaacc caaaatcggc atagacctcg aacagcagat cgataaacgc
     5341 cgcgacctcc ccttggagct gatcctcggt gcaaaagata tgggcgtcat cctggacaaa
     5401 atgtcgcacc cgcatcaatc catgaagcgt tccggagggt tcgttgcggt gacaggaacc
     5461 aaactccgcc aagcgcaacg gcagatcgcg gtagctcttg atcccctgat tgaagatctg
     5521 cacatgaccg gggcaactca tcggtttgac ggcgtaatcc cggttttccg aatgggtcgt
     5581 gaacatgacc tcgcggaact tatcccagtg gccggaacgc tcccaaagca ccctgtccac
     5641 cacctccggg gtccttacct cctcataacc ccgttcgcag agcttactgc gaatatacgt
     5701 ctggatctgc cggtagagcg tccagccttt cggatgccag aacaccatgc ctggggcctc
     5761 cggctgcatg tggaacagat tgagctgtct tccgagcttg cggtggtcac gcttttcggc
     5821 ttgctctaaa cggcttaggt agtcattgag ggcctcttta tccggccaga cggttccata
     5881 gatccgttgc agcatctcat tattcggatc tccgcgccaa taggcccccg ctaccttggt
     5941 gagcttgaag gctttgagct tgccggtgct cggcacatga ggcccgcggc agagatcgat
     6001 aaactcgccc tggtgataga gcgagatcgc ttcattctcg gggatcgcgg cgatgatgtt
     6061 ggccttatat tcctcgccca tttggcgaaa caaggccacc gcctcatcgc gggacatgac
     6121 cgagcgcctc accgggagat cctgcctggc caattcctgc atcttagcct caatggcggc
     6181 gagatcctca ggggtgaaag gccgcccaaa ggcaaaatca tagtaaaatc catcctcgat
     6241 caccggaccg atcgtcacct gcgccgatgg aaacagggtt ttcaccgcct gcgccagcaa
     6301 gtgagcgcag ctatgccgca acacctcgac tccctcagga tccttggggg tgataatggt
     6361 taatgcacaa tccttgtcga tcacatagga ggtatccacg agcttgctat
//
LOCUS       DASQSL010002068         1133 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_120621, whole genome shotgun sequence.
ACCESSION   DASQSL010002068 DASQSL010000000
VERSION     DASQSL010002068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120621"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1119)
                     /locus_tag="VE844_20830"
     CDS             complement(<1..1119)
                     /locus_tag="VE844_20830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC03695.1"
                     /translation="MLWLGLITCLLGCLMGLIAQQVLAGLLSGLIAGDLPAPSLLPVV
                     TGTLTGLIALLGFALPPLIQLKNVSPARVLRRDLGDDHTPAAAIYISAIVAIALLVSW
                     HAGEVRLTLYVLGGSVATVGILAIAAWILVNSLSFLRSRVGVAWRYGFANVARRAHSS
                     IVQTVALGLGIMALLLLTLVRADLLESWQAKLPKEAPNHFVINIQPEEVAAIREFFKA
                     KGINPTGLYPIVHGRLVAINEEPVDPAHYEEPRAQRLARREFHLTWMTRLQTDNRIVA
                     GRWWPPETTDSDQFSIENDIAEILGIALDDTLSFQVLDQKVAAKVTSIRTVNWDTFNP
                     NFFVIAPPGLLDRYPATYITSFFLGEQQKSILIELSRGF"
BASE COUNT          268 a          313 c          342 g          210 t
ORIGIN      
        1 aaagcctcgc gagagctcta tgagtatcga cttctgctgt tctcccaaga aaaaactagt
       61 tatgtaggta gcaggatagc gatccaggag accggggggg gcgatcacga aaaaattggg
      121 attgaaggta tcccagttca ccgtgcgaat actggtgacc ttggcagcca ccttctgatc
      181 cagcacctgg aagctcagcg tatcgtcgag ggcgatcccc aggatctcgg ctatatcgtt
      241 ctctattgag aattgatcgc tgtcggtggt ctcgggcggc caccagcggc ccgctacaat
      301 gcggttgtcg gtctggaggc gtgtcatcca ggtgagatgg aattcgcgtc tggccagccg
      361 ttgtgcgcgc ggctcctcat aatgtgccgg atcgacgggt tcctcattga tggctaccag
      421 ccgtccatgg acgataggat aaaggcccgt ggggtttatc cctttggctt taaagaactc
      481 gcggatcgcc gctacctctt cgggctggat attgatcaca aagtgattag gggcctcttt
      541 gggcaatttg gcctgccagc tctccaggag atctgcgcgc accaaggtca ataacaagag
      601 cgccatgatc ccaagaccca aagccacggt ttgcacgata ctgctgtgcg cccgccgggc
      661 gacattggca aaaccatagc gccaggccac accgacccgc gaacgcaaga agcttaggct
      721 attgaccagg atccaagcgg ctatcgcgag gatcccgacg gtagctacgc tgccgcctag
      781 cacatagagc gtcaagcgca cctcgcctgc atgccaggag accaggagcg caatcgccac
      841 gatagcgctg atatagatgg cggcggcggg cgtatgatca tcccccaggt cacggcgcag
      901 gacccgggca ggcgatacgt ttttaagttg gatcaagggc ggcagggcga aacccagtaa
      961 agcgatgaga ccggtcaagg tgccggttac cacaggcagt agcgaaggcg cgggtagatc
     1021 gcccgcgata agcccagaca gcaaaccagc cagcacctgc tgagcgatga ggcccatgag
     1081 gcagcctaaa aggcaggtaa taagacccag ccagagcatg gtgagggcat aga
//
LOCUS       DASQSL010002069         1435 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_109540, whole genome shotgun sequence.
ACCESSION   DASQSL010002069 DASQSL010000000
VERSION     DASQSL010002069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1435)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1435)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1435
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109540"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..158)
                     /gene="rpsB"
                     /locus_tag="VE844_20835"
     CDS             complement(<1..158)
                     /gene="rpsB"
                     /locus_tag="VE844_20835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011521370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HZC03696.1"
                     /translation="MATVTLRQLLEAGTHFGHQTRRWNPKMKRYIYGARNGIYIIDLQ
                     KTLRQLRQA"
     gene            complement(393..968)
                     /locus_tag="VE844_20840"
     CDS             complement(393..968)
                     /locus_tag="VE844_20840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012545523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006801 - superoxide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-Mn family superoxide dismutase"
                     /protein_id="HZC03697.1"
                     /translation="MAYSARSWTLDLKGLSKDQLDVHFALYQGYVTNTNRLNDSIAQM
                     IKDGKGNTPDCAELKRRLGFEYNGMVLHEYYFDNLQSTAPLSKDGALYKKLQEMYGSY
                     ETWEADFKNTGLMRGIGWAIMFQDPNTKALTNHWVNDHEVGHIAGFKPILIMDVWEHA
                     YTVDFKATERAKYIDAFMANVNWETVSKRFG"
BASE COUNT          279 a          430 c          410 g          316 t
ORIGIN      
        1 gcctgtcgca attgccgcag cgtcttctgc aaatcgatga tgtaaatacc gttacgcgca
       61 ccgtagatgt agcgtttcat tttggggttc caacgccgtg tttggtgccc aaaatgcgta
      121 cccgcctcca gcagttggcg cagggttact gttgccacac tgtctctcct ccctgattag
      181 ggcctccaac ccgactcagc tgtcaccgag gtcgctgcgg accttgccag tgaggggcgg
      241 gtatcagtcc acccctcaca accaagacac cggacgtggc atcgccctgt accgaggtgg
      301 aacggccact gtccggcaag acggtcatgc tcaaggggca tggtccactc gcgcaagttg
      361 ccgtatccgg cgtgatggat cggcgtcgat ccctagccaa accgtttgga gaccgtttcc
      421 cagttcacat tggccatgaa cgcgtcgatg tacttggcgc gttcggtggc cttgaaatcc
      481 accgtgtagg catgttccca cacgtccatg atgaggatcg gcttgaagcc cgcgatgtgc
      541 ccgacctcat ggtcgttgac ccagtgattc gtcagtgctt tggtgttcgg atcctggaac
      601 atgatggccc agccgatgcc gcgcatgagg cccgtgttct taaaatccgc ctcccaggtc
      661 tcatagctgc catacatctc ctggagcttc ttgtacaggg cgccgtcttt gctcagtggg
      721 gccgttgatt gcaggttatc gaagtagtac tcatgcagga ccatgccgtt gtactcgaag
      781 cccaggcgcc gcttcagctc ggcacagtcc ggggtgttcc ccttgccatc cttgatcatc
      841 tgggcgatgc tgtcgttcag gcgattggtg ttcgtcacat agccctgata aagggcgaag
      901 tgcacgtcga gctgatcctt gctgaggcct ttcaaatcca gagtccagct tctcgcagag
      961 taagccatgg gtctcccccc ttctcgtcgt caacgttcct caccgtggac tctacttcct
     1021 actactgtca tgcgacctgt ggtcgacatc ccctgcaaag gtgctgtaat taaggccccc
     1081 tcagggcctc ctggcaccgc tgtcatgacg actggcccgc cgaggtcgcc acacagccgg
     1141 ccccaagacg gcgccatggg gcggcacata ttggctcgga tatagagctg cattatactg
     1201 atagtgcccg gcgcatggca agggaaaggg cgcgaaatcg attgacttcg ccctcggggg
     1261 tccgtacaag gataggcagc ccgacgtcat ggtcgagcgc aggcaggacc catcggtggc
     1321 agcctgactt tagagagggc gggatgtgcg accggaagac agcagtcacg atgccaccac
     1381 gagcgaacgc ctatcgttga cgataaggga gtgaccgcgt gaagatctat accaa
//
LOCUS       DASQSL010002070         1032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_109561, whole genome shotgun sequence.
ACCESSION   DASQSL010002070 DASQSL010000000
VERSION     DASQSL010002070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109561"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            328..>1032
                     /locus_tag="VE844_20845"
     CDS             328..>1032
                     /locus_tag="VE844_20845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03698.1"
                     /translation="MSTSPQYTLKSQDVYKFTLQTLDALPLDMPGVIQPQDLMRVLVF
                     AAASRTSVHQACEQLERAPSGPTVLRTLAQQLSDLDELEAHVNAMLARLVPKGLGKRG
                     CRIALDLTALPYHGPVDEAHQDEVCRSKAKSGTTHFFTYATAYAIVRGRRYTLALYRV
                     RAKQSMDHVLRTLLERWVTLGIRIKLVLLDRGFYSVRVIRDLITAELPFIMPAVKRGK
                     KPTMPGGPTGTYALAAE"
BASE COUNT          226 a          309 c          270 g          227 t
ORIGIN      
        1 ctcgatccca ccactcccca atggatagcc gcctcggcgg agctgacgat agtgcacgag
       61 cattcggtga ttcttacgct gcccgcagtc gttcttgatg acgcacaaac acctgatcaa
      121 agatgccgtt atacttggca caacgcaggg ccaacatctg gttgcagttg atttcgtacc
      181 accaagtccc cgagcgtttg aggcgagcgt ggcaaataaa ctcagtagtt gaaaatggtg
      241 attagccaaa tcaagctatc aaaaacaaag ggctctctga tataagagga aaaaccccaa
      301 ttcctccatc ttacaaggag agccctgatg tcgacatcgc ctcagtatac cttgaagagt
      361 caagacgtgt acaagttcac ccttcagacc cttgacgcct tgcccttgga catgcccggc
      421 gtcattcaac cccaagacct catgcgggtg ctggtttttg ccgccgcctc ccgcacctcc
      481 gtccatcaag cctgcgagca acttgagcgc gctccatcgg gtcccaccgt cttgagaacc
      541 ctggcccagc aactgagcga tctcgatgag cttgaagcac acgtcaatgc catgttggcg
      601 cgtcttgtgc ccaagggctt gggcaagcgc ggctgtcgca tcgccctgga tttgaccgcg
      661 ctgccttacc atggacctgt cgatgaggcc catcaagacg aggtttgtcg cagcaaagcc
      721 aaaagtggca cgacccattt tttcacctat gccactgcct atgccatcgt gcgaggccgg
      781 cgctatacct tggcgctgta tcgggtgcgg gccaagcaga gcatggatca cgttttgcgc
      841 acgttgcttg agcgctgggt gaccttgggc atccgcatca agctcgtttt gcttgaccgc
      901 ggcttttaca gcgtgcgggt catacgtgat ttgatcacgg ccgagttgcc gttcatcatg
      961 ccggcggtta aacgcggtaa aaagcccaca atgccgggtg gtcccaccgg gacctatgcc
     1021 ctggcggctg aa
//
LOCUS       DASQSL010002071         2001 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_54692, whole genome shotgun sequence.
ACCESSION   DASQSL010002071 DASQSL010000000
VERSION     DASQSL010002071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2001
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54692"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(373..927)
                     /locus_tag="VE844_20850"
     CDS             complement(373..927)
                     /locus_tag="VE844_20850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012949713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HZC03699.1"
                     /translation="MEKLPPSDDAATSKPHRFEASQGPRILGPNDGKALDFGSFGVRF
                     MVWVEESGGGFSLVEHPIPPRTLVAPLHRHANEDEYSYVLEGRMGAQLGDEVVYAEKG
                     DLVFKPRDQWHTFWNAGDGPCRILEIISPGGFEHVFKEMADDPEAMTGEAGLALHARY
                     GIEADYESVERLCEEHGLAFPMEE"
     gene            complement(1009..1865)
                     /locus_tag="VE844_20855"
                     /pseudo
     CDS             complement(1009..1865)
                     /locus_tag="VE844_20855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611154.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
BASE COUNT          398 a          653 c          545 g          405 t
ORIGIN      
        1 gaagtacagt tcgaaggcat gaccgaggtg gtagaggatt agggcttcgc gctcgcctac
       61 cacgtgacgc tgggctatgt ctgcaactct gtccccgtcg agctccacgt gtcgcccctc
      121 tctgctcgct ccccaccacc gcgcatctta cccttacccg gccgtggccg tcagcggcta
      181 tcctcgcggc tctcagaggg cgctatatgc acgatcctgc aagcgaactt ctgagaattc
      241 ctcttccacg cacttgggtg cataagggca tcagagaggg ccggggcatt gcgcctcgac
      301 ccttactagg ttctgcttaa gaactgcgcc gtctactaca gcgttcgccg ccgcgatcgc
      361 gctcctggca cgtcattcct ccatggggaa ggcgagcccg tgctcttcac aaaggcgctc
      421 cacgctttcg tagtcggcct cgatgccgta gcgggcatgg agcgctaagc ctgcctcacc
      481 ggtcattgcc tcaggatcat cggccatttc cttgaacaca tgctcgaacc ctccggggga
      541 gatgatctca aggatccggc acggcccgtc gccggcgttc caaaaggtgt gccactggtc
      601 gcggggtttg aagacgagat cccccttctc cgcgtacacg acctcatctc cgagctgcgc
      661 ccccatacgc ccttcaagga cgtagctgta ctcgtcctcg tttgcgtgcc ggtgaagcgg
      721 ggcgacgagc gtccgcgggg ggatcggatg ctccacaagg gagaacccac ccccggactc
      781 ctcgacccac accataaacc ggacaccgaa ggacccgaag tcgagagctt tcccatcgtt
      841 gggcccgagg atgcgcgggc cctgagaggc ctcgaagcga tgaggcttgg aagttgccgc
      901 atcatcggaa ggcggtagtt tttccatagg tctcctcctt cacctttctg agtgtgatga
      961 acaatagaac cttacgagtg atgttgcaac agactcaacg gctcagcact acgtattgcc
     1021 tgagaaccgc tccagcatgc ggaagtaacg tcgcacgaac gacaacttca ccatcgtcag
     1081 gaagttcctg gccagcttct caaagcgtgt ggcaatccgc cggtgctcct tgagccaccc
     1141 cactagacgc tcgactatgt tgcgctggca gtaggtgacc ctgcagaagg taggaggacg
     1201 cccgcgccgc ctgcgtcgct tgcccgcagg gatgcgcttt tcgggaatca cgcagcgaat
     1261 accgcggcga cgcaagtatc ttctaaagtc acctgcatca taacctcgat ccgccaccac
     1321 taccttcgga cggctgcgtg gtctgccacc tcccgcgctg gttcgcaccc gcacgcttgc
     1381 cagcagttcc tggcagacgg tgctctcgtg ctgctgtccc ggcgtaagaa gtgccgccaa
     1441 aggattacct aggccgtcgc aaaccaggtg cagtttcgtg gagaagccgc cacgggagcg
     1501 acccaaagcc tcacagcccc ctttttcgct cccgctgcgg ctcgggaggc cctgacattt
     1561 gtggaatcga caaaccaagt atccaaatcc accagcccct cctccttcag tcggacctgc
     1621 agccgctcca ggatacggtc gaaggtgcca tcgttggtcc agatgcgata ccagtggtat
     1681 gcgctttgcc aggggccgta acgctccgga aggtcccgcc aagaagcacc actgcacaaa
     1741 atccagaaga tggcgttgag catctgcctg gggtcacgcc gcttgcgtcc ggtggccttc
     1801 ggcggaggta aaaggtcacg aattagttgc cattgccact cgtggagttc gtaccgttct
     1861 atcataaggg cagcatagcg gcagaacgac tcgtaggcgt tctcagacag gccctagtct
     1921 tcggtcatta ctttctctat caccccctcc ctagagcatc gccaccgatc taggccacta
     1981 accacttttt acaacaacaa t
//
LOCUS       DASQSL010002072         1820 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_174641, whole genome shotgun sequence.
ACCESSION   DASQSL010002072 DASQSL010000000
VERSION     DASQSL010002072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1820
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174641"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(129..1217)
                     /locus_tag="VE844_20860"
     CDS             complement(129..1217)
                     /locus_tag="VE844_20860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020652241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HZC03700.1"
                     /translation="MNRRDFLKTSAFAAASAVGLAQAQGLVAEKKLGFAIVGLGRFGA
                     GQLLRSLPECKYAKPVALVSGHPDKARDLAQKYGIKEKSIYNYENFDSIKDNSEVDVV
                     YVVLPNSMHCEYTVRAAQAGKHVICEKPMAVSVEECQQMIEACKRAKRKLMIGYRLHY
                     EPFNLKAMEICRGGEYGKLRQAVADHAFNIGPNEWRTDKKLAGGGPLMDLGIYCLQAA
                     RYLSGEEPTHVSAQTWQPSDDPRFKTTEASMAFSLKFPGGALANCSCNYAEHSASGYH
                     FMTEQAYGRLDQGFAYGGISFLLKERGKPRQIELPQINQFAAEMDHFAQCVLNDKTPR
                     TPGEMGLQDVKIMMKLYESAESGKTIEM"
BASE COUNT          363 a          559 c          489 g          409 t
ORIGIN      
        1 tattacgggc agaagcccta ttgggaatag aacttaattg tcctctgtgg cggctctgat
       61 ccggccggat tgatgcagtt gcaccgcggt atcgatggtt gtcgttgaag tgtcggacat
      121 gctactgatt acatttcaat cgtcttgccg ctctccgccg actcgtacag cttcatcatg
      181 atcttcacat cctgcagccc catttcgccc ggcgtacggg gcgttttgtc attcaagacg
      241 cactgggcga agtgatccat ctcggcggcg aactggttga tctgcggcag ctcgatctgc
      301 cgcggcttgc cgcgctcttt cagcaggaag ctgatcccgc cgtacgcgaa cccctgatcg
      361 agccgcccgt atgcctgctc cgtcatgaag tgatagccgg atgcgctgtg ctcggcgtag
      421 ttgcacgagc agttggccag cgcgccgccg gggaatttga gcgaaaatgc catcgacgct
      481 tcggtcgtct tgaaccgcgg gtcgtcgctc ggctgccacg tctgcgcgct cacgtgcgtc
      541 ggctcttcgc cgctgagata tcgcgcggcc tgcaggcagt agatgcctag gtccatcagc
      601 ggcccgccgc cggccagctt cttgtccgtc cgccactcgt tgggcccgat gttgaacgcg
      661 tggtcggcca ccgcctgtcg cagcttcccg tactccccgc cgcgacagat ctccatcgcc
      721 ttcaggttga acggctcata gtgcagtcgg tagccgatca tcagcttgcg tttcgccctc
      781 ttgcacgctt cgatcatttg ctggcattcc tcgacgctga cggccatcgg cttctcgcag
      841 atcacgtgct taccggcctg cgcggcgcga accgtgtatt cgcagtgcat cgagttgggc
      901 aggacaacgt agacgacatc aacctcggag ttgtccttga tcgagtcgaa gttctcgtag
      961 ttatagatag acttctcttt gatgccgtac ttctgcgcca agtccctcgc cttatcggga
     1021 tgcccgctga ccagcgcgac aggcttggcg tatttgcact ccggcagcga ccgaagcagc
     1081 tggcctgcgc caaaccgccc gaggccgacg atcgcgaagc ccagtttctt ttccgcgacc
     1141 aggccctgcg cttgtgccaa ccccaccgcg ctcgccgccg cgaaggctga ggtcttgaga
     1201 aagtctcgac gattcattct gtgctcctga tgggttagtc ttactgtctc gtgccgctct
     1261 tctcggcacc ggcgaggtca ccaagatcat cttatagccg agccatggca atttgcccta
     1321 taccatgaga aactcgcgac gaggctccgg tgcgtgcctt ttaggccgcc ttatccatac
     1381 cttcgtacta tatatcctat ggtaaacact aatgccgacg gcagccatac ccacctcagc
     1441 tcacttagca taacccgtac tccccagctg gataaaaagc tcattacccc gatcggggat
     1501 acttctatgg gcctccaggg aaagaaatac ctctcattac tcaatggtgc aagcagcgct
     1561 acccccagcc ccccattcgt cagcatatcg agaattgagt gcgaaagcgt tgataacagc
     1621 aagaacagaa agattaccca atggtcgccc gggctgctac ggaaaagcgt gaaagtcaac
     1681 atagcggcta gggcgacagc gaagaatagg gaatgcgata agcccctgtg accgagcatg
     1741 tggttatacc tgatgccaaa cttaaagccg ctcacatcga ggtcggggat aaggtctcct
     1801 taggaataaa cacagagagt
//
LOCUS       DASQSL010002073         1271 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_109584, whole genome shotgun sequence.
ACCESSION   DASQSL010002073 DASQSL010000000
VERSION     DASQSL010002073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1271
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109584"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            500..1183
                     /locus_tag="VE844_20865"
     CDS             500..1183
                     /locus_tag="VE844_20865"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HZC03701.1"
                     /translation="MHDQRESDNGIVPQKHPNNEQLSLLEGVEERPLTKGNTRQLPAV
                     RTLSRGAASRGLWRVRQAAKRDAHLRFTALFHHLSPELLAESFYQLERDAAPGIDGVT
                     WHDYEANLGANLRALHARLHQGRYRTQPLRRVYIPKADGTNRPLGIACLEDKIVQQAV
                     VSVLSAIYEVDFLGFSYGFRPGRSPHDALDALSVGLMKKKVWWVLDADIQQFYDTLDR
                     HWLRRFLQH"
BASE COUNT          276 a          313 c          405 g          277 t
ORIGIN      
        1 tttgaggcta cgtcagtgcc attcgagtat actctaactg gacgtcagag atacgtcctc
       61 gtactgtcag aatagagtta ttttgtatat ttcttgacga ctctgctcca aggttagaga
      121 ctctatcttg acatatcggg agggtcttta gtgcgccagg ctaactggcg atgtagagtg
      181 ggtgcaagtc ccatatgatg aaggtgtagc gaaccacatc attccctgag tcatgcgtgt
      241 ctgaccgtaa gggcaggggc gaagcgttga caggggtgct ggtaggcaag gtatggagct
      301 gcgaaatcat ccggttcagg gtgccgacgt tgttagagaa acggaaggcc acatcgatgc
      361 tcacgttaac gcgagtgggg attggaccct gcgcagtcag agacccttag catgccagta
      421 cgtgcatcgc gcgggacctg ggaggccctc tggtcgccct tcggggccga gtgaggaagg
      481 ccaaggccgt acgctcacca tgcacgacca gagggagtca gacaacggta tagtaccgca
      541 gaagcacccg aacaatgagc agctgagctt gttggagggt gtggaggaaa ggccgttgac
      601 caaggggaac acgcggcaat tgcccgcagt ccggacgctg agccggggag ctgcgtcgcg
      661 tggattgtgg cgtgtgcgcc aagccgcgaa acgggatgct caccttcgtt ttacggccct
      721 gtttcatcat ctcagtccgg agctgctggc cgagagcttt taccagcttg agcgtgatgc
      781 agcacccggg atcgatgggg tgacctggca cgattatgaa gcgaacctgg gggcgaatct
      841 gcgggcatta catgctcgtc ttcaccaggg acgctaccgg acccagccgc tccgtcgggt
      901 ctatattcca aaggctgatg gaacgaatcg tccgttgggc atcgcgtgtc tcgaagacaa
      961 gattgtccaa caggcggtgg tcagtgtgct gagcgcgatc tacgaggtcg acttcctggg
     1021 cttttcctac gggtttcgcc cgggccgtag ccctcatgat gcgctcgatg cactgtcggt
     1081 cgggctgatg aagaagaagg tgtggtgggt gctcgatgct gatatccagc agttttatga
     1141 tacgctggat cggcactggt tgcggcgctt tctccagcac tgaattggag acaaacgcct
     1201 gctacgagtg atcaataagt ggcttgagat cgagatcatc gacgccgacg gtcacaagat
     1261 gaaatcggaa a
//
LOCUS       DASQSL010002074         1642 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_202506, whole genome shotgun sequence.
ACCESSION   DASQSL010002074 DASQSL010000000
VERSION     DASQSL010002074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1642
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202506"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(79..194)
                     /gene="rrf"
                     /locus_tag="VE844_20870"
     rRNA            complement(79..194)
                     /gene="rrf"
                     /locus_tag="VE844_20870"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(254..>1642)
                     /locus_tag="VE844_20875"
     rRNA            complement(254..>1642)
                     /locus_tag="VE844_20875"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          338 a          510 c          396 g          398 t
ORIGIN      
        1 cgagggcttg acggatcttt tgatctttcg ctttgctcgc cggttcgccg gcgtgcgacc
       61 ggctgtgcag ttttcaagct tcggcgacaa cctccttcct acacggttcc ccatgtagta
      121 tcgttggtgc agaagggctt ccctgccgta ttcgggatgg gaacgggtgt gaccccttcg
      181 ctatagtcgc cgaaaaatcc aatattcggt tgtattcata atggcaagtg cttgagatca
      241 acgcattcaa tttaaggtca agtcacatga ccgattagta ctgctcagct tcacacgttg
      301 ccgcgcttcc acctgcagcc tatcaacgtt gtcgtcttca acaggtctat ggggccgaag
      361 cccgggagtg ctcatcttga ggttggcttc ccgcttagat gcattcagcg gttatccgtt
      421 ccgcatgtag ctacccagca gtgcagctgg cgccacaact ggtacactag agatgcgtcc
      481 atcccggtcc tctcgtacta gggacagctc ctctcaacac tccaacgccc acggaagata
      541 aggaccgaac tgtctcacga cgttctaaac ccagctcgcg taccgcttta atgggcgaac
      601 agcccaaccc ttgggacctg cttcagcccc aggatgcgat gagccgacat cgaggtgcca
      661 aaccccgccg tcgatgtgaa ctcttgggcg ggataagcct gttatccccg gcgtaccttt
      721 tatccgatga gcgatggccc taccacaaag gaccaccgga tcactaagcc cgactttcgt
      781 ctctgctcga ggtgtccctc tcgcagtcaa gcacccttgt gcctttacac tcgacagcgg
      841 atttccatac cgcctgaggg taccattggg cgcctccgtt actttttggg aggcgaccgc
      901 cccagtcaaa ctacccgcct gacagggtcc cagatccgga taacggatca tggttaggac
      961 gtcaaacact ccagggtggt atttcaagga cggctccaca aaggctagcg cccctgcttc
     1021 aaagcctccc acctatccta cacaaaaata tccaacgccc actatcaggg tatagtaaag
     1081 gtgcacgggg tctttccgtc tttccgcggg tacacagcat cttcactgtg actacaattt
     1141 cactgagatc ctcgtcgaga cagggcccaa atcgttacgc cattcatgca ggtcggaact
     1201 tacccgacaa ggaatttcgc taccttagga ccgttatagt tacggccgcc gtttaccggg
     1261 gcttcgatta ggagcttctc cccgaaagga tgacccctcc tcttaacctt ccggcaccgg
     1321 gcaggcgtca gtccctatac atcgtcttgc gacttcgcag agacctgtgt ttttagtaaa
     1381 cagtcgtctg gccctggttt gtgccacctc gtcgtgctcc acccgtgcgg gcttcacact
     1441 accaaggtac tccttctccc gaagttacgg agtcaacttg ccgagttcct taacgagggt
     1501 tacctcacgc cttaggatac tctcctcacc cacctgtgtc ggtttcgggt acggcttcct
     1561 cattcactcg ctagaggctt ttctaggcgg catgggttta cccacttaca ggccgaagcc
     1621 tcgccatcac ctctcggagt ta
//
LOCUS       DASQSL010002075         1037 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_109602, whole genome shotgun sequence.
ACCESSION   DASQSL010002075 DASQSL010000000
VERSION     DASQSL010002075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109602"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..585
                     /locus_tag="VE844_20880"
     CDS             <1..585
                     /locus_tag="VE844_20880"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZC03702.1"
                     /translation="DAGRCFCGERETTHLPPHRISWLGVARTFQDLRLILQAPMLENV
                     LLARPAQRGERLWSALSRFGVAAEEERNREEALQLLRFVGLEAKASDLAGELSYGQQK
                     LLTLACCLATGAKILLLDEPVAGVHPEMVTHILELLCQLGTNGKLLVFIEHDLIAVRQ
                     IADRIIVMDEGKVIAQGPPHDVLERPEIMEAYLA"
     gene            578..>1037
                     /locus_tag="VE844_20885"
     CDS             578..>1037
                     /locus_tag="VE844_20885"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZC03703.1"
                     /translation="MPDSSRSLLEVEGLVSGYGKKQVLNGMSIEVMPGEIGALIGHNG
                     AGKSTLLKTVFGLLPAWKGQMTLDGKGLTSPTPRKLLGLGVCYVPQGNRVFTDLNVRE
                     NLELGGITLPGNARLNDGIERVLTLFPGLKPRLRQRTGSLSGGEKQMLALA"
BASE COUNT          206 a          300 c          323 g          208 t
ORIGIN      
        1 gatgccggtc gctgcttttg cggcgagcgc gaaaccaccc atctaccccc acaccgcatt
       61 tcatggttgg gcgttgcgcg caccttccag gatctgcggc tgatcctcca ggccccgatg
      121 ctagaaaatg ttctactggc caggcccgcg caacgcggtg agcgcttgtg gtccgcgctg
      181 tcgcgtttcg gtgtggcggc ggaggaagaa cgaaaccgcg aggaggcgct ccagctcctg
      241 cgcttcgtgg gtctcgaagc gaaggcctcc gatctggcgg gcgagctttc gtacggacag
      301 cagaagctct tgaccctcgc ctgctgcctg gcaaccggtg ccaagatcct gcttctggat
      361 gagccagtgg ccggtgtaca cccagaaatg gttacccata tactggagct attgtgtcag
      421 ttaggcacga acggaaagct gctcgtattc atcgagcatg atctgattgc ggtgcgccag
      481 atagctgatc gcatcattgt gatggacgaa ggcaaggtca tcgcccaggg gccaccccac
      541 gacgtgctgg agcgaccgga gatcatggag gcctatcttg cctgacagct cccggagcct
      601 cctagaagtg gagggcctcg tcagcggcta tggaaagaag caggtgctaa acggcatgag
      661 tatcgaggtc atgccgggtg agatcggggc gctgattggc cacaatggcg caggcaaatc
      721 gacgctgctc aagactgtat tcggtctcct tcccgcctgg aaagggcaga tgacccttga
      781 cggcaagggc ttaacctcac ctaccccacg caaattgttg ggcttaggtg tttgctatgt
      841 cccgcaggga aaccgtgtct tcaccgatct gaacgtgcgg gagaatctgg agttaggagg
      901 catcacactt ccgggtaacg cgcgcttgaa tgacggcatc gagcgtgtcc tgaccctttt
      961 ccccggcctt aagccccgtc tacgccaacg gacggggagc ctgtccgggg gtgagaagca
     1021 aatgctggcc ctggcca
//
LOCUS       DASQSL010002076         1107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_174686, whole genome shotgun sequence.
ACCESSION   DASQSL010002076 DASQSL010000000
VERSION     DASQSL010002076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174686"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1087
                     /gene="groEL"
                     /locus_tag="VE844_20890"
     CDS             <1..1087
                     /gene="groEL"
                     /locus_tag="VE844_20890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010960045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HZC03704.1"
                     /translation="NTLEVVEGMQFDRGYLSPYFINNQQNMSVELENPSILLHDKKIS
                     NIRELLPVLEGIAKSGKSLLIIAEDVEGEALATLVVNNIRGIVKSAAVKAPGFGDRRK
                     AMLEDIAILTGGTVISEEVGLSLEKASLDDLGTAKKVLISKEETTIIGGAGDSRAIEG
                     RVKQIRAQIEESTSDYDKEKLQERVAKLAGGVAVIKVGAATETEMKEKKARVEDALHA
                     TRAAVEEGIVPGGGVALIRALDDLGSLKGANHDQDVGIQIARRAMEEPLRQIVGNTGE
                     EPSVVLNKVKESKGNFGWNAATGEYGDMVEMGILDPTKVTRTALQNAASIAGLMITTE
                     AMVAEMPKEEEKMMPGGRPGMGDMDMM"
BASE COUNT          264 a          278 c          363 g          202 t
ORIGIN      
        1 gaataccctg gaagtggtcg agggtatgca gttcgaccgg ggttacctct cgccttattt
       61 catcaataat cagcagaaca tgagtgtgga gttggaaaat ccctctatcc tgctgcacga
      121 taagaagatc tccaatatcc gcgagctatt gcccgtgctt gagggcattg ccaagtctgg
      181 caagtcctta ttgatcatcg ctgaggatgt agagggcgag gccttggcga cgctggtggt
      241 caacaatatc cgcggtatcg tcaagtctgc cgcggtcaag gccccgggtt ttggggatcg
      301 gcgcaaggcc atgctggagg acatcgccat cctgaccggc ggcacagtta tctccgagga
      361 agtgggctta agccttgaaa aggccagtct ggacgatctg ggcacggcca agaaggtcct
      421 tatcagcaag gaggagacca cgatcatcgg cggggcaggc gattccaggg ctattgaagg
      481 ccgagtcaag cagatccggg cccagatcga ggaatctacc tccgattatg ataaggagaa
      541 gctgcaggag cgggtcgcca agctcgccgg gggcgtggcc gtcatcaagg tcggcgccgc
      601 caccgagacc gagatgaaag agaagaaggc gcgtgtggaa gacgcgctcc atgccacccg
      661 cgcggcggtc gaagaaggca ttgtcccggg cggtggtgta gcgctgattc gggcgctcga
      721 tgacttgggt agtctcaagg gcgccaacca cgatcaggat gtcgggatcc agatcgccag
      781 acgggcgatg gaagagccgc tccgtcagat cgtcggcaat accggcgaag agccttcggt
      841 ggtgctcaat aaggtcaagg aaagcaaagg caacttcggt tggaacgccg ccacgggcga
      901 atacggtgat atggtagaaa tgggcatcct tgatccgacc aaggtaacgc gcacagcgct
      961 gcagaacgcc gcttctatcg cgggtctcat gatcaccact gaggccatgg tggcggagat
     1021 gcccaaagaa gaggaaaaga tgatgccagg gggacgccct ggcatgggcg atatggatat
     1081 gatgtaaaac ctgagagtta agcggct
//
LOCUS       DASQSL010002077         1784 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_120714, whole genome shotgun sequence.
ACCESSION   DASQSL010002077 DASQSL010000000
VERSION     DASQSL010002077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120714"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..227)
                     /locus_tag="VE844_20895"
     CDS             complement(<1..227)
                     /locus_tag="VE844_20895"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03705.1"
                     /translation="MHSAITQPATGSIWNTLKGLIYTPKHTSWLNQIEIWFSILVGRL
                     LKRASFNSIEELHQALINFIEYFNATMAKPF"
     gene            complement(176..1387)
                     /locus_tag="VE844_20900"
     CDS             complement(176..1387)
                     /locus_tag="VE844_20900"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03706.1"
                     /translation="MSAVVFAIKPSVHAAYQGREAEVGTSIVSVYSKLKGIELQTSAE
                     LVRYSATALAPIVEQVGGAREPWLAGYQVKIIDGNCLEATEHRLKPLRELGAGALPGN
                     SLVVFDPVLGLVTEVFPCEAGHAQERALLGEVLPTIKAGELWLHDRNFCTRDFLCGHV
                     VRGAFFISRQHQQLPLEALGELRPAGRVETGKVAEQRVRVCDSAGNGYTFRRIRLELD
                     EPTRDGEQVIYLLTNLPRQVASAKTIARLYGKRWPIERAFQDLEGHLHSEINTLGYPQ
                     AALFGFCVALVAYNALAVVFAALRAVHGAQTIDHEVSGYYLANEIAETHRGMMIAIPE
                     EYWQVFATMSAAVFAATLLQLAHKVRLRTFRKHPRGPKKPPPKRHSSAQQPHVSTARL
                     LSQQRAQSGTP"
     gene            complement(1394..1555)
                     /locus_tag="VE844_20905"
     CDS             complement(1394..1555)
                     /locus_tag="VE844_20905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03707.1"
                     /translation="MLGEIFQRFVEKSPIAVMVRGVLERVLGAEALDAWYERTAQKQY
                     TQTLLFSTL"
BASE COUNT          387 a          560 c          479 g          358 t
ORIGIN      
        1 ttgaacggct tggccatagt agcgttgaag tactcgatga agttgatcaa cgcctgatgc
       61 aactcctcga tggagttgaa actggcacgt ttgagcaggc gcccaaccag gatgctaaac
      121 caaatctcta tctgattgag ccaggaggta tgcttagggg tatagatcag cccttttaag
      181 gtgttccaga ttgagcccgt tgctggctga gtaatcgcgc tgtggataca tggggttgtt
      241 gagcgctact gtggcgcttt ggggggggct ttttgggacc ccgaggatgc ttacgaaagg
      301 tccgtaagcg caccttgtga gccagttgca acaacgtcgc ggcaaacacc gctgcggaca
      361 tcgttgcaaa gacctgccag tattcttcgg gaatggcgat catcattcca cgatgcgttt
      421 cggcgatttc gttggcgagg tagtagccgg agacctcgtg gtcgatggtc tgcgccccat
      481 gcaccgcccg caaggcggca aacaccactg ccagcgcgtt gtaggcgacc aacgcgacac
      541 agaagccaaa cagcgccgcc tgcggatagc ccagggtatt gatctccgag tgcaggtgcc
      601 cttctaagtc ttggaacgcg cgctcgatcg gccagcgctt accgtacagc cgagcgatgg
      661 tcttggcgct agcgacttgg cgcggaagat tcgtcagcag ataaatcacc tgctcaccat
      721 cacgggtcgg ttcatccaac tccagccgga tccgccgaaa cgtatacccg ttacccgctg
      781 aatcgcacac ccggacccgt tgctcggcca ccttgccggt ctcaacccga ccggccgggc
      841 gcagctcacc gagcgcttcc aagggcagct gctgatgctg gcggctgatg aaaaacgccc
      901 cgcgtaccac gtgcccacag agaaaatcac gggtacagaa attacggtca tgcagccaca
      961 gctcacccgc cttgatcgtc ggcaatacct cccccagcaa agcccgctct tgcgcatgac
     1021 cggcttcaca ggggaagacc tcggttacca gtcccagcac cgggtcaaac actaccaacg
     1081 agttgccggg caaggccccc gcccctagct cgcgcaacgg cttcagccgg tgctcggtcg
     1141 cttccagaca attcccgtcg ataatcttga cttgataccc ggccaaccac ggctcccgcg
     1201 caccgcccac ctgctccacg atcggcgcca aggccgtcgc actgtaccga accagttccg
     1261 ccgaagtttg caactctatc cccttgagct tgctatagac cgacacaatc gaggtgccca
     1321 cctccgcttc gcgcccctga taggccgcgt gcaccgaggg cttgatcgcg aacaccaccg
     1381 cgctcatcaa ctcctagagg gtcgaaaata acagggtctg ggtatactgc ttctgggccg
     1441 ttcgctcata ccaggcatcc agcgcctcgg cacctagcac ccgctcaagc actccgcgca
     1501 ccatcaccgc gataggactt ttctcgacaa accgttgaaa gatttctcca agcatagcga
     1561 cctccgcttc agcaatttct cgcgttatga tagtttacaa agcggtggtc accttaaaag
     1621 ggctggtctt atggatgcaa gcaccgaaat cgagggtaga gcctaccggc gctatagagg
     1681 ctgcggatct gcttggagct tatcttatgc gcaagtgacg agcatggtaa gccctgatca
     1741 ccgccgtgga ccccatgtct gtgctcactt taaaaagccc ggct
//
LOCUS       DASQSL010002078         2531 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_109656, whole genome shotgun sequence.
ACCESSION   DASQSL010002078 DASQSL010000000
VERSION     DASQSL010002078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2531
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109656"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1154)
                     /gene="tolB"
                     /locus_tag="VE844_20910"
     CDS             complement(<1..1154)
                     /gene="tolB"
                     /locus_tag="VE844_20910"
                     /inference="COORDINATES: protein motif:HMM:TIGR02800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system beta propeller repeat protein
                     TolB"
                     /protein_id="HZC03708.1"
                     /translation="MLIRQCALLIVGFLLGLSPAEAVLTIKITKGIEGALPIAIVPFD
                     AQAPTPIDIAEVVSSDLAGSGRFAPLPAADMPSQPHEFSAINFANWRKLGMEYLVVGT
                     TVAGPSGGYQVEFRLIDIYKGEQLMGYRIPTSSRGLRLTAHQISDLIYAKLLGSKGAF
                     ATRIAYITVEGANRNRVYELQIADADGHNPRTLLRSRQPLMSPTWSPYGKRLAYVSFE
                     GYNSAIYVQDIETGHRQVVASGPGLNSAPAWSPDEQRLAMTLSRDGNPEIYVLHLASR
                     RLQRITEDPAIDTEPAWSPDGNSLAFTSDRGGKPQIYQVSADGGRPRRLTHEGSYNAR
                     PSFSADGKLLTMVHGDGRGYRIAVLELATEQLTVLTDTSLDESPSFAPNNT"
     gene            complement(1166..1447)
                     /locus_tag="VE844_20915"
     CDS             complement(1166..1447)
                     /locus_tag="VE844_20915"
                     /inference="COORDINATES: protein motif:HMM:NF018252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein TolA"
                     /protein_id="HZC03709.1"
                     /translation="MLVHQRARYIRKIKAKIEGTFINPAKGLRCKIFIRMIPGGEVVE
                     AKVVQSSGNPNFDRRAEIAVHKAAPLPVPDEPRLFRELKELYFDFEPEG"
     gene            1680..>2531
                     /locus_tag="VE844_20920"
     CDS             1680..>2531
                     /locus_tag="VE844_20920"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HZC03710.1"
                     /translation="MFKIIDNRTTSHLIRRWDRVVVVATCFLAFGQLLPAASAGEEFH
                     LEEATIADIHRAIGGKQISCTELVQLYINRAKAYNGVCTRLVTEEGAAIPAATGYVRA
                     GSPIEFPTETVAASDWLPDFDLYVGPAFDLGRMEPTASDPSVQQQFGMRVGIPDAGQI
                     NALETLNIRGERSVTCKGAYDAHPSSGPLPQGAPPSCEEFRQQPDALERAAELDAQYG
                     SNPPLDELPMYCIPFAFKDPWDTKDMRTTANADANYAMDAAPEDSTNVVQLREKGAII
                     YAKASAAE"
BASE COUNT          588 a          671 c          715 g          557 t
ORIGIN      
        1 gtgttgttgg gggcaaaact aggcgattca tcaagggagg tatcggttaa cacggtcaac
       61 tgttcggtag cgagctccaa aaccgcgatc cgatagccac ggccatcgcc atgcaccatg
      121 gtcaatagct tgccatcggc ggagaagctt ggccgtgcat tataactgcc ttcgtgggtt
      181 aggcgcctgg gccgaccacc gtccgcgctc acctgataga tctgaggctt gccgccacga
      241 tcggaggtaa atgccagact gttcccgtca ggtgaccagg ccggctcggt atcgatggcc
      301 ggatcctctg tgatccgctg taaccgccgg ctcgccaagt gcaacacata gatctccgga
      361 ttgccgtccc tggacagggt catagccagg cgttgctcat cgggtgacca cgccggggcg
      421 ctattgagac cggggcccga ggcgactacc tggcggtggc cggtctcgat gtcctgaacg
      481 tagatggcgg aattgtagcc ttcgaacgag acataggcca agcgttttcc atagggcgac
      541 cacgtaggcg acatcaaggg ctgcctggat cgcagcaagg tgcgtggatt gtgtccgtcg
      601 gcatcggcga tctggagctc atagactcga tttctattgg cgccttctac ggtgatgtag
      661 gcgatccggg tggcaaaggc gcccttgctg cccaagagct ttgcataaat aagatcgctg
      721 atctgatggg cggtcaggcg caaaccccgg gaactggtcg ggatcctata tcccataagc
      781 tgttcgccct tatagatatc gatcagccgg aactcgacct gatagccgcc actcgggccg
      841 gctacggtag tgcctacgac gaggtattcc atgcccagtt tacgccaatt agcaaagttg
      901 atcgcggaaa attcatgggg ctgggatggc atatcggccg cgggtaaggg agcaaaacgg
      961 ccgctgcccg ccagatccga ggaaacaacc tcggcaatat caatcggcgt cggcgcctgt
     1021 gcatcaaacg gtacaatggc aatcggcagt gcgccttcga tacccttagt gatcttgatc
     1081 gtgaggacgg cctcggcagg actgaggccg agcagaaatc caacaatgag cagagcgcat
     1141 tggcgtatca acatgactga atagattatc cctctggctc gaagtcgaaa taaagctcct
     1201 taagctcccg gaataggcgt ggctcatccg gtacaggcag gggcgcggcc ttgtgcacgg
     1261 cgatttcggc tcgccggtcg aagttgggat tgccacttga ttggaccacc ttggcttcta
     1321 ccacctcccc gcccgggatc atccgtataa atattttaca tcttaatccc ttagccgggt
     1381 tgataaatgt cccctcaatc ttggccttta ttttacgtat atatctagcg cgttgatgca
     1441 ctaacattgc tcagcaccgc actatttcag ggcaaaatcg cagccacgcc gatgcttctt
     1501 gtgggtatca aataagagtt ctttttcaca atcaaaacgt tgcggtttgt tgtgactgtg
     1561 gcacagcgtt tgccgcatgc aatgagtcgt cgggaggcgg cgaccacgag gccccaaagc
     1621 actgtgtagg ggcacgtttt gcctaaccaa gtcctataac aaattgagag gcgaaagaca
     1681 tgtttaaaat catcgacaac agaactactt cccacctaat acgtaggtgg gatagggtcg
     1741 ttgttgtagc cacctgcttt ctggcattcg gacagctgct gcctgcggca agtgcaggtg
     1801 aggagttcca tctcgaagaa gcgacgattg ctgatataca tcgtgcgatc gggggaaagc
     1861 aaatcagttg cacggaattg gtgcaactat acatcaatcg agcaaaggcc tataatggtg
     1921 tctgcactcg gcttgtcact gaagagggag cagctattcc tgctgccact ggctatgttc
     1981 gcgcggggtc gccaatagag ttcccaactg aaacagtagc ggcatcggac tggcttccgg
     2041 attttgatct gtatgtgggg ccggcgtttg atttaggcag aatggaacca acagcatctg
     2101 acccaagcgt acagcaacag tttggaatga gggtcggtat ccctgatgcg ggccagatta
     2161 acgcgctcga gaccctcaat attcgtggtg agcgttccgt gacatgcaaa ggcgcatacg
     2221 acgcgcatcc gtcatcaggt cctcttccac aaggagctcc gccaagctgc gaagaattcc
     2281 gccagcagcc agatgctctg gagcgagcag cagagctgga tgcacaatat ggcagcaatc
     2341 ctcctctaga tgagttgccg atgtactgca ttccatttgc attcaaggat ccttgggata
     2401 caaaagatat gcgcacaaca gcgaatgccg acgccaacta tgccatggat gcagctccgg
     2461 aggactccac caatgtagtc cagcttcgtg agaaaggggc tatcatttac gccaaggcca
     2521 gtgcggctga a
//
LOCUS       DASQSL010002079         3383 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_95470, whole genome shotgun sequence.
ACCESSION   DASQSL010002079 DASQSL010000000
VERSION     DASQSL010002079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3383
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95470"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2974
                     /locus_tag="VE844_20925"
     CDS             <1..2974
                     /locus_tag="VE844_20925"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HZC03711.1"
                     /translation="ALFLDVDDECLWRRGQKIPLTPKTFALLRYLVEHRNRLVTKQAL
                     LEGVWPGIYVVESEVKHYVGKLRKALGDDPKAPQFIETIRRRGYRFIGEITVRDSRSG
                     SEPTVAPTRDSRVAWASLASGPEPSGREAELDQLQQCLHKTLSGERQVCFITGEPGIG
                     KTTLVSAFLKDIATHSEIGIARGQCLEGYGAGEPYMPVLEALETLYGAPGNRRVVECL
                     SHYAPSWLLQMPGLLESAELEDIQRRTQGVIRERMLRELAQFFEALTAEWGLILWIED
                     LHWADDSTLGLIAYLAQRPQQARLLVIGTYRPVEMYRDDHPLKRLCAELQAQGRCAVL
                     TLQGLSEAAVADYLEAQYPPTTSFPPELAGMIHRHTEGNALFMVRVLAHMVAQGWLAP
                     SGNQWALQVDLKTLELGIPDNLWELIERQLDRLDAEDQRLLEVCSVAGSTFSVAAAAA
                     GWAQEVETVEERCEVLARRKQFIRRRATTAWPDGTVAAEYEFLHGLYHQILYERVMPL
                     RRTRLHRLVGERMERGYSDKTQEVAAELAYHFERGRDFRRAARYLGEAADNALRRGAS
                     SEAIDTLGKAIAMLRTLPDSPERKRQELTLLICLGAALTAVKGYGAPDVEQTFIRSHE
                     LCHEMGDPPERFSVLRGLVAFYVGRARYQTARELGEQLLTLARDTDNDAHYVEAHLSL
                     GATLYFLGDFIPALAHLEQVNLHYDPARHHTHAILYGQDPSILALGFKALVLWFLGHP
                     SQALMANRLALARSQAMVHHFNHALALCMSAYLHVVRREARQAETQAEATLVLATEHE
                     FSYLSAEAFIYRGWAQTEQCYEEGGIATIRQGLAAFEATGAVAGRTAYLAILAEAHAR
                     CGQNREALNILNEGLTLADHLGEQFCAAELHQLKGEILRRHGGDGATTTAESCFRRAF
                     DIASCQGAKSWELRAATSLARLWRDQGKYSQARDLLTPVYDWFTEGFDTLDLREAKDL
                     LEQLRFFGNLNGPEVIES"
     gene            complement(3173..3370)
                     /locus_tag="VE844_20930"
                     /pseudo
     CDS             complement(3173..3370)
                     /locus_tag="VE844_20930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012168287.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
BASE COUNT          685 a          925 c         1084 g          689 t
ORIGIN      
        1 ggcgcttttc cttgatgtgg acgatgagtg tctctggcgg cgtggccaga agatccccct
       61 cacgcccaag accttcgctt tactgcgcta cctggtagag caccggaacc ggttagtcac
      121 gaagcaggcc ttgttggagg gagtttggcc aggaatctat gtggtcgaaa gtgaggttaa
      181 gcattacgtg gggaagctgc ggaaggcatt aggcgatgat cccaaggccc cgcagttcat
      241 cgagaccatt cgcaggcgag gctatcggtt cattggggag attaccgtga gggattcacg
      301 gtctgggtcg gagccgacgg tagccccgac acgggactcc agggtggcat gggctagctt
      361 agcctcgggt cctgaaccca gcggtcggga ggctgaactc gatcaattgc agcagtgcct
      421 gcacaagacc ctctcgggcg agcgccaagt ctgcttcatt accggcgagc cgggcattgg
      481 gaagacaacg ctggtgagcg ccttcctgaa ggacatagcc acccactcag agatagggat
      541 tgcccgtggc caatgtttgg aagggtacgg ggcaggagaa ccctatatgc cggtgttgga
      601 agcgctggaa acgctctacg gcgcacccgg caaccgacgc gtggtggagt gcctcagcca
      661 ctatgccccg agttggcttc tgcagatgcc gggcttactg gagtcggctg agcttgaaga
      721 catacagcgc aggacgcagg gcgtgatccg ggagcggatg ctaagggaac tagcccagtt
      781 tttcgaagca ttgaccgctg agtggggact catcctttgg atcgaggatc tgcattgggc
      841 ggatgactcc acccttggcc tcatcgcgta tctggcccag cggccacagc aggcacggct
      901 tctcgtgatc ggtacgtacc gaccggtgga aatgtatcgg gacgatcatc ccctgaaaag
      961 gctctgtgcg gagctacagg cccaggggcg ctgtgctgta cttaccttgc aagggctcag
     1021 cgaagcagct gtcgcggatt atttggaggc gcagtacccc ccgaccacga gctttccgcc
     1081 ggagcttgcg ggcatgattc accggcatac agagggtaac gccttattca tggtgcgggt
     1141 gcttgcgcat atggtcgccc aagggtggct tgcgccgtca ggcaaccaat gggcactcca
     1201 ggttgacctg aaaaccctcg aactggggat cccggacaac ctctgggagt tgattgagcg
     1261 acagctggat cgcctcgacg cggaggacca acgactgctg gaagtctgta gcgtggctgg
     1321 gtctaccttt tcggtagcgg ctgcggccgc tggatgggct caggaggtgg agacggttga
     1381 ggaacgctgt gaggtgctcg cccggcggaa gcagtttata cgtcggcgag caacaaccgc
     1441 gtggcccgat ggcaccgtcg cggcagagta tgaatttctc catgggctgt atcatcaaat
     1501 cctatacgag cgggtcatgc ccttgcggcg cacacgattg caccgactcg tgggggagcg
     1561 gatggagcgg ggttattcgg acaagaccca ggaggtcgcg gcggagctgg cttatcattt
     1621 cgagcggggg cgcgatttcc gtcgtgccgc ccgttatcta ggtgaggcag cggacaatgc
     1681 gctccggcgg ggtgcctcct cggaggccat cgacactctg gggaaggcga tcgccatgct
     1741 gagaactctt ccagactccc cggagcgcaa gcggcaagag ctgaccctcc tgatttgcct
     1801 tggggcggcg ttgacggcgg tcaagggtta tggggctccg gatgtcgagc aaacctttat
     1861 ccggtcacac gagctgtgtc acgaaatggg agatccaccg gagcggttct cggtgctgag
     1921 gggcctagtg gcattttatg tggggcgggc gaggtaccag acggcgcggg aattgggcga
     1981 acagcttctc accctcgccc gagataccga taacgacgca cactacgtgg aagcccacct
     2041 gtcgctaggc gcgactttgt actttctcgg cgatttcatc ccggcgcttg cccacctgga
     2101 gcaggtgaat ctgcactatg atcctgcgcg ccaccatact catgcgattc tctacggtca
     2161 ggaccccagc atcctggctt taggctttaa ggcactggta ttgtggttcc tgggccaccc
     2221 ctcgcaggcg ctgatggcga atcgcctggc cttggctcgc tcccaggcaa tggtgcatca
     2281 tttcaatcat gcgctggcct tgtgcatgag cgcctatctt catgtggtac gccgggaggc
     2341 acgacaagcc gagacgcagg ccgaggcgac tctcgtgcta gccaccgagc acgaattctc
     2401 ctatctctca gcggaggcat tcatctaccg gggttgggca cagacggaac agtgctatga
     2461 ggagggggga attgccacaa tccgccaggg cctggccgca tttgaggcaa ccggcgctgt
     2521 ggcgggtcgg acggcctatc tcgccatact ggccgaggcg catgcacgtt gcggacagaa
     2581 ccgggaggct ctgaatatcc tcaacgaggg actcacgctc gcggatcacc tcggcgagca
     2641 gttctgtgcc gctgagttgc atcaattgaa gggcgagatt ttgcggcgcc acggcgggga
     2701 tggagcgacc accaccgcgg aatcctgttt tcgccgtgct ttcgatatcg ccagctgcca
     2761 aggcgccaag agttgggagc tgcgcgcggc aacgagcctg gcccggctat ggcgcgacca
     2821 gggcaaatac agccaggccc gcgacctgct cacaccagtt tatgactggt ttaccgaggg
     2881 ctttgatacg ctggacttgc gcgaggccaa agacttgctc gaacaattaa ggtttttcgg
     2941 gaatttgaat ggtccggaag tcattgaatc ctaagcaaac tgatcgcgcc aaaggggtca
     3001 gtatgtttag gggtctgacc ctgaggtatc cccacgaatt tagttgtcga tattgtagct
     3061 ttgtacggcg gcatacatcg cattgatggc ggctcgatag tggctcaggg tcaggagcac
     3121 gcgcgggtcg tcaatcacta gaaaacgtga gttcgacgta agaatcacaa ggacggcatc
     3181 gtttatcgag ttccggggca taatgctgaa cccaacggta gagggtcgtg tgatccactg
     3241 ataagccccg ttccaacatc atttcctcga gatcccgata actcaatgca tagcgcaggt
     3301 accagcggac gcagagcagg atgatctcag cttcaaagtg gcgccacttg aacggattac
     3361 gttgactcat agggtgatga tct
//
LOCUS       DASQSL010002080         1558 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_39663, whole genome shotgun sequence.
ACCESSION   DASQSL010002080 DASQSL010000000
VERSION     DASQSL010002080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1558
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39663"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            229..735
                     /locus_tag="VE844_20935"
     CDS             229..735
                     /locus_tag="VE844_20935"
                     /inference="COORDINATES: protein motif:HMM:NF013068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03712.1"
                     /translation="MRIAACEEQIIRIKHASFQPEINETLEAQLREQVKIAVQTTVEG
                     ALEAELAEDLTDRIDEKPRRSGFFHRVLDTQYGRIPELRVPKLRWGNKERKWHILRRY
                     QRGLSSFLGFALYLYVLGLSLRDLQEACYLLLGAVISRSAINQITLQVQARLDQYRLA
                     PITETPRS"
     gene            732..1514
                     /locus_tag="VE844_20940"
     CDS             732..1514
                     /locus_tag="VE844_20940"
                     /inference="COORDINATES: protein motif:HMM:NF013068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03713.1"
                     /translation="MIVDGVWVEIQYTLDEFKEDRAGHQRQVRQAQERVILTALAVWP
                     EGHYQIFHYEVAEGENEACWLAFFDHLIARHLDPTAVRLVVSDGANGLVAAMAHRLPQ
                     ASQQRCITHKVRGMERYLSFEHLPVQDAQGRALEPTQAKEARRTEIFQEAYAIYEAPT
                     LEAAQLNLAAFIEQWRPLEPKAVHAFCWGIERTFTFYQFDARLHIRIRTTNLLERFFR
                     EFRAKADEIGAFPNETSCLTVFALVVERDHAKHNRLPVAKNL"
BASE COUNT          335 a          470 c          435 g          318 t
ORIGIN      
        1 gatcatcgcc tacgggcaat tgtggctggc gcacggcgtg gtcgccgatt gcccacgtcc
       61 cgtggcaccc ctctcagctg aaactgaccc cagggcgggt gcatcaggcc atggggggaa
      121 ttttcgcggc gattggtaca ccccgcgtta atgtcatgag tttttcgcca cattgacaag
      181 gcggtaaggt caagcataaa tgggactttt ggcaactgga gacacctcat gaggattgct
      241 gcctgtgaag aacaaatcat tcgcatcaag catgcgagct ttcaacctga aatcaatgaa
      301 accctcgaag ctcaactccg agaacaggtt aaaatcgcgg tccaaacgac ggtcgaaggc
      361 gcgctcgagg ccgaactggc ggaggacctg accgatcgga tcgacgagaa gccacgacgt
      421 tcgggcttct tccaccgtgt gctggatacc cagtacgggc ggatccccga actgcgcgta
      481 ccgaagctgc gctggggcaa taaagagcgc aaatggcata ttttgcggcg ctaccagcgc
      541 ggcttgagta gcttcctcgg ctttgccctg tatctctacg tgctaggctt atccttgcgt
      601 gatttgcaag aagcctgtta cctcctgtta ggggcggtca tttcgcgaag cgcgatcaat
      661 cagatcaccc tccaagtgca agctcgcctt gaccaatacc gcttggctcc gattaccgag
      721 accccccgat cttgatcgtc gatggggtat gggtcgagat tcaatacacg ctcgatgaat
      781 tcaaagaaga tcgcgcgggg catcaacgcc aagtgcggca ggcgcaagag cgcgtcattt
      841 taactgcgct tgccgtctgg cccgagggtc attaccagat cttccactac gaagtcgccg
      901 agggcgagaa cgaggcctgt tggctggcgt tcttcgatca cttgatcgcc cgccacctcg
      961 acccgacagc cgtccgcctg gtggtcagcg atggggccaa cggcttggtt gccgccatgg
     1021 cacaccgctt accccaggcc agccaacaac ggtgcatcac gcacaaggtg cgcgggatgg
     1081 aacgctatct cagtttcgag cacctccccg tgcaggatgc tcaggggcgg gcactcgagc
     1141 cgactcaagc caaagaagcc cggcgcaccg agatctttca ggaggcttac gcgatttatg
     1201 aggccccaac cctcgaggcc gcgcaactca acttagccgc ctttattgag caatggcgcc
     1261 cgctcgagcc caaggcagtg cacgcctttt gttggggcat tgagcgaacc ttcaccttct
     1321 atcaattcga cgcccgcttg cacatccgca tccgcaccac caatctgttg gagcgtttct
     1381 tccgtgagtt ccgcgccaag gccgatgaga tcggcgcctt tcccaacgag accagttgcc
     1441 tgacagtgtt tgcactcgtg gttgagcgtg accatgcaaa acataaccgc ctgccagtgg
     1501 cgaaaaactt atgacactaa ccaggtcgcg ctgccacccg gtattactcg ggtcgtgg
//
LOCUS       DASQSL010002081         1410 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_174787, whole genome shotgun sequence.
ACCESSION   DASQSL010002081 DASQSL010000000
VERSION     DASQSL010002081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1410
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174787"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..478
                     /locus_tag="VE844_20945"
     CDS             <1..478
                     /locus_tag="VE844_20945"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HZC03714.1"
                     /translation="ITIAVLHGYCLGGGVQLAISCDIRICSTECHIGLPAVNEGLFPS
                     MACFRLPRLIGLGAARRLILSGAVIGPEEALRLGLIDHLVLADNFDAGVAEVVERYLA
                     APSAASIASKRLMKQALDNAFETVYEESQKWLVDCLASAEVEAAKEAWLRRRAKRG"
BASE COUNT          334 a          354 c          411 g          311 t
ORIGIN      
        1 gattacgata gctgttctgc atggctactg tcttggaggt ggggttcagc tcgctatttc
       61 ctgtgacatc cgcatctgca gcacggagtg ccacatcggt ctgccggctg tcaatgaggg
      121 cctattcccc tcaatggcgt gcttccgcct gccgcgtttg atcggacttg gagcggcgcg
      181 ccggctgatc ctctccggtg cggtgatcgg accggaggaa gcgctgcgtc tggggctcat
      241 cgaccatctg gtgctggcag acaactttga tgctggagta gccgaggtgg tggagcggta
      301 tcttgcagct ccgtcagcgg cctcgatcgc ctcaaagcga cttatgaaac aggctctgga
      361 taatgcgttt gagacggtat acgaggagtc tcagaagtgg ttggtagact gcctggcatc
      421 agcggaagtt gaggctgcca aagaagcctg gttgcgacgc cgggccaaga ggggatagag
      481 ccaaccgccg aagcaggagg ctgggcggat aaccaggtgt ggtcctagct gccagctaac
      541 aaccggttgg ggtccgacgc tcgctacgct cgcgcagctc aaccggagcg ttaggcgatg
      601 gaaaattgga gaaccaatcg gcccatagag atcacgggag aatcttctat ggaggcatta
      661 tgcaaggtat tctggatgaa gggcatgatg attatcggat ttatcacggt tttagctatc
      721 acaggttgcg aaaccaatgg ggaccgagag aatggaagta aaagagtctt cttgtgcgcg
      781 tcacaaaact taataggcgt tgcttctgca acgtatgtaa gccttgccgc ttgccaagca
      841 caaacggcga ctctcgagca ggccgccgcg acagacggca cgaacaagtg cacagatttt
      901 tgccgtccaa cgggttgcct ggcatcaacg attccgccaa cgcttctcgg taacgctggc
      961 cagtgccgag ggccagaccc gaacaacaat aatagacatt atcgggttta actagagcca
     1021 accaagctca gcatatcgaa gccagttagg ggtggtggca actgacacgg aggttgtgca
     1081 agccgcacac gatctccatc acgagatccg aaatgctatc tttggtcagc cgtaaaatat
     1141 ctttgacgat gcgacaccgt ttgatcgcta cgattacatg ctcgactacc accctcacgc
     1201 tggagaagat gcgatcgaac ctttgctgct ggtgtctgac aagcctggac gtccgcgcaa
     1261 gtattcgcta cgggagatcc tgaacgcgat tttctatgtg ctaaggaggt gtaaattaat
     1321 taggctattc agtaaaccac cggctctgcc ggtgagactt gaaaaggcta tgctgttccc
     1381 gcgataatca aaaattagat gaagctcatg
//
LOCUS       DASQSL010002082         1405 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_120830, whole genome shotgun sequence.
ACCESSION   DASQSL010002082 DASQSL010000000
VERSION     DASQSL010002082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1405
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120830"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(178..>1405)
                     /locus_tag="VE844_20950"
     CDS             complement(178..>1405)
                     /locus_tag="VE844_20950"
                     /inference="COORDINATES: protein motif:HMM:NF017416.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03715.1"
                     /translation="GRTLKLRIHLGAFLLQWLYDLTDRQVEWSLKDNAAYQLFCGRGI
                     VDTWHAPDHTKIEEFRSRLSKETQRQVANEIAVWATPLGFTDPSAMEIDSTVQDANIA
                     YPSDAQLMGKMTLLVNKVGTYMKQHVSCFADFMPSVDVKAVKAKARAYLFCDRQHAEH
                     AQRAFQDLWHEAFTQISHVRKYFDVLLDDDMERMPWNIRRAFEQVHEHCSNLLLNVAS
                     FMCRGVMVPDKALSCHAKAVSCFNKGTRAQGLHFGRVFQLGRIGGNFLLVGACTSLRM
                     EDKASVHPMITEHQRLFGPDTLTSFGTDKGYDSGANGKYLQSMEGLEACCLQQPGLDT
                     SRLSESDRETLTRLANRRAGIEPLLGHAKQGGPRGQSRMKTDETTLAAGYGSRGGFNL
                     RQRIRHVLSKDIKPRR"
BASE COUNT          276 a          403 c          397 g          329 t
ORIGIN      
        1 ccggcctcgt tttcagtatc gttgtctctt gttttctgtg tcagactggc ctgacagggg
       61 gtgttactga cccgtgcata aatagtcgct ggcgcgaaat tcgaaacgtc tgccatcctg
      121 aggccttgag atatttccgc atccctgtcc gatctcttcc gagctcaggg cgatacgtta
      181 tcgcctcggt ttgatatcct tgctcagcac gtggcggatg cgttgccgca gattgaagcc
      241 ccctctcgag ccgtatcccg ctgccagggt cgtctcatca gttttcatgc gactctggcc
      301 acgtggccca ccctgtttgg catggccgag caagggttcg atcccggccc ggcgatttgc
      361 caggcgagtc agggtttccc tgtcgctttc cgacagacgg ctggtatcga ggccgggttg
      421 ctgaaggcaa cacgcctcca gcccttccat ggactggaga tacttgccat tggcgccgct
      481 gtcatagccc ttgtccgtgc cgaatgaggt caacgtgtct gggccaaaga gccgctgatg
      541 ttctgtgatc atggggtgta ccgaggcttt gtcttccatc cggagtgaag tacacgcgcc
      601 caccagcagg aagttccccc caatgcgtcc aagctggaag acacgcccga agtgcaggcc
      661 ctgtgcacgc gtgcctttgt tgaaacagct gacggctttc gcatggcacg agagggcttt
      721 gtcaggcacc atcactccac gacacataaa actcgccacg ttgaggagaa gattggagca
      781 gtgctcgtgc acctgctcaa acgcccgccg aatgttccag ggcatccgct ccatatcgtc
      841 gtcaagcagg acatcaaaat attttctcac gtggctgatc tgagtaaacg cttcgtgcca
      901 gaggtcttga aatgccctct gtgcgtgctc cgcatgctga cggtcgcaaa acaagtaggc
      961 tctggctttg gctttgaccg ctttgacatc aactgagggc atgaaatcgg cgaagcacga
     1021 cacgtgctgc ttcatgtacg tcccgacttt attgaccagc agcgtcattt tccccatcag
     1081 ctgggcatca gacggatagg cgatattggc gtcttggacc gtggaatcga tctccatggc
     1141 cgacggatca gtaaagccca gtggggtggc ccagaccgca atctcattgg cgacttggcg
     1201 ctgcgtctct ttggacaacc gcgagcgaaa ctcctcgatc ttcgtgtggt cgggagcgtg
     1261 ccaggtgtcg acgatgcctc ggccgcaaaa gagctggtag gcggcattgt ccttgagaga
     1321 ccattcgact tggcggtcgg tgaggtcgta cagccactgg agtaaaaaag cccccaagtg
     1381 aatacgtaac ttcagtgttc tgccg
//
LOCUS       DASQSL010002083         2404 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_202619, whole genome shotgun sequence.
ACCESSION   DASQSL010002083 DASQSL010000000
VERSION     DASQSL010002083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2404
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202619"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            187..366
                     /locus_tag="VE844_20955"
     CDS             187..366
                     /locus_tag="VE844_20955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03716.1"
                     /translation="MSRSLAFCHLLRGAGFDFFTGMAKARIALELKIGEATVYRILAR
                     DRERDREQAHPASSA"
     gene            445..2244
                     /locus_tag="VE844_20960"
     CDS             445..2244
                     /locus_tag="VE844_20960"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HZC03717.1"
                     /translation="MIEKTHRNALQPGYRLHWYRIDHILGQGSFGITYLAHDLNLDRQ
                     VAIKEYLPIETAVREGAVFIYPLTSDRGEQYHWGLERFIAEARMLATFEHPNIVRVLN
                     VFEANNTAYMVMGYEPGESLQDVLNRRKRVEETELLMILLPILDGLEKIHQSGFIHRD
                     IKPANIFIRQDGNPVLLDFGSARQAMGEQTHTLTSLFSPGYAPIEQYYGKGDQQGPWT
                     DVYGLGATLYRGMAGVAPLDALERMQGILQASKDPFIPAIEVGHGRYSKRFLQAIDQA
                     LSFQPGERPQTIGEWRRQFYLAPESSRPEPPPEDMEAVPTVIDNDTTARQLPPSAPDS
                     WQDEQSERLRAQRDAAQARAAARRWQILTALCVVILGEGLFLWFQPSPMPPADEPIVP
                     YSSLLTPHSSPPAPTPQADEPIAPPKTGSPTVARGLSATQQLEGSAPIEVPPAKVSPK
                     VEVDGLDKVSAPPKEEQINAFLAGASQDMKAGRFTRPKDNNALEKYWAILALQPDHLQ
                     AVQGIQQILEHVVQRAREAMGRADWSKAQAHLDEADVILPGAEATAKAREELSTRKTE
                     AQRRALATEQEKKRKDAEQVVKQKVVKRKYPKE"
     gene            2234..2347
                     /locus_tag="VE844_20965"
                     /pseudo
     CDS             2234..2347
                     /locus_tag="VE844_20965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558264.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
BASE COUNT          590 a          690 c          653 g          471 t
ORIGIN      
        1 caaaagacga ccaatagcct aaaataattc tcggtagcgg gccagtgcgt gggacgatga
       61 gggtcaggca ggcgcttgaa ccagagtctg acgggctgac tccgctaccc tgcttcacgc
      121 catctgtcaa gcactaaaaa cttgagaatc gagtgaattc gtttacaaac tacgaacagg
      181 caagtagtga gtcgtagttt ggccttctgt cacctcttac gtggtgccgg cttcgatttc
      241 ttcaccggta tggccaaggc gcgcattgcc ctggagctaa aaatcggcga agccacagtc
      301 taccggattc tggccagaga ccgtgagaga gaccgtgagc aggctcaccc agcctcatcg
      361 gcgtaaatat gacgaactct taacccgact ttccgtccag ttgctactca aaccccgtat
      421 actatgtgct atgtgcgtta caccatgata gagaaaaccc atcgcaatgc actccaaccg
      481 ggttaccggc tgcactggta tcggatcgac catattctag gccagggcag tttcgggatc
      541 acctatcttg cgcacgacct aaatctcgat cggcaggtcg ccatcaaaga gtacttaccg
      601 atcgagaccg cggtgcgcga gggggccgtt tttatttatc cgctcacatc cgatcgcggc
      661 gagcagtacc attggggctt agaacgcttc atcgccgagg cgcgcatgct ggccaccttt
      721 gagcatccta acatcgtgcg ggtgctgaat gtcttcgagg cgaacaacac cgcttacatg
      781 gtgatgggat atgaacccgg cgaaagtctt caggacgtat taaatcgccg caagcgcgtt
      841 gaagaaaccg agctgctgat gattttgctc cccattctcg acggcttgga aaagatccac
      901 caaagcggtt ttattcaccg cgatatcaag cccgccaaca tcttcatccg ccaggacggg
      961 aatccggtgc tgttggactt tggttccgca cggcaggcca tgggcgagca gacgcacacg
     1021 ctaaccagtc tattctcccc cggatacgcc ccgatagaac aatattatgg caaaggcgat
     1081 caacaggggc cttggaccga tgtctatggt cttggggcca cattgtaccg ggggatggcg
     1141 ggtgttgcgc cgctagatgc gttggagcgg atgcagggga tcctgcaagc gtcaaaagat
     1201 ccctttatac cggcgatcga agtgggacat ggccgctaca gtaaacgttt ccttcaggcc
     1261 attgaccaag cgttgagttt tcagcccggg gaacgtcctc agaccattgg tgagtggcga
     1321 cggcaattct atttggcgcc ggaatcgtct cgccccgaac ctcctcctga agacatggag
     1381 gccgtgccca ccgtcatcga taatgacacg acggcaaggc agttgccgcc ctcagcccca
     1441 gacagctggc aagacgagca gtctgagcgt cttcgagcgc agcgcgacgc cgctcaagcc
     1501 cgcgctgcgg cgcggcggtg gcagatcttg acggcgctgt gcgtcgttat actaggtgaa
     1561 gggctatttc tttggttcca accttctccc atgcctccag cagatgaacc gatcgtgcct
     1621 tactcctcac tcctcactcc tcactcctct ccccctgctc ccacgcctca agcagatgaa
     1681 ccgatcgcgc caccaaaaac gggatcgccc accgtagcca gagggctatc cgctacacaa
     1741 cagttagaag gttccgcccc aatcgaggtg ccacccgcaa aagtgagccc aaaggtggaa
     1801 gtcgatggcc tagacaaggt gtcagcaccg cctaaggagg agcagataaa cgctttcctg
     1861 gccggagcga gccaagacat gaaggccggt cgcttcaccc gtcccaagga taataacgcc
     1921 ctcgagaagt attgggcgat cctcgccctg cagccagacc acctccaagc cgtccagggc
     1981 attcaacaga tcctggagca tgtggtccaa cgcgcgcgtg aggctatggg acgtgccgat
     2041 tggagcaagg cgcaggccca tctggatgag gcagacgtga tccttccagg agccgaagcc
     2101 acggccaagg cccgagagga attgagcacc cgtaaaactg aagcgcaacg acgggccctg
     2161 gccaccgagc aagagaaaaa acgcaaggac gcagagcagg tggttaaaca gaaggtggta
     2221 aagagaaaat atccaaaaga gtgaacgaaa aaatctgaca ttaagaacac gcatcaagcg
     2281 attggttcgg aaaacgatat gcttttccaa aaagattgtt agcgcgccaa agcgctggga
     2341 tggttaagtc gcctttagga cggccaacgg cagcacttgc tgctccttcc agtataaatc
     2401 ccac
//
LOCUS       DASQSL010002084         1577 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_174828, whole genome shotgun sequence.
ACCESSION   DASQSL010002084 DASQSL010000000
VERSION     DASQSL010002084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1577
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174828"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..109
                     /gene="iscA"
                     /locus_tag="VE844_20970"
     CDS             <1..109
                     /gene="iscA"
                     /locus_tag="VE844_20970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_252501.1"
                     /note="forms iron-sulfur clusters of ferredoxin [2FE-2S];
                     binds iron in the presence of the thioredoxin reductase
                     system; forms homodimers and tetramers; similar to SufA
                     protein; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HZC03718.1"
                     /translation="AGTELDYTREGLNEGFKFHNPNVKATCGCGESFNV"
     gene            128..>1577
                     /gene="sufB"
                     /locus_tag="VE844_20975"
     CDS             128..>1577
                     /gene="sufB"
                     /locus_tag="VE844_20975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006162013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HZC03719.1"
                     /translation="MAVPHSQSMEALVNRTYEAGFYTDLESDTAPPGLNEGIIRLISD
                     KKQEPEWLLEWRLAALRHWLTMTEPKWATVQHPPIDYQAISYYSAPRSKNDGPKSLDE
                     VDPKLLETYEKLGIPLRERELLAGVAVDAVFDSVSVATTFKEKLAEAGVIFCSFSEAV
                     QRHPDLVRQYLGTVVPITDNFFAALNSAVFSDGSFCYVPKGVRCPMELSTYFRINALN
                     TGQFERTLIIAEEGSYVSYLEGCTAPMRDENQLHAAVVELITLDRAQIKYSTVQNWYP
                     GDEQGRGGIYNFVTKRGECRGAHSKISWTQVETGSAITWKYPSCILRGDNSVGAFYSV
                     ALTNHYQQADTGTKMIHLGRNTKSTIISKGVSAGRGQNAYRGLVKIAKGAENARNYTQ
                     CDSLLMGDRCGAHTFPYIEVKNSTAQVEHEASTSKISEDQLFYCQSRGIAEEDAVTMI
                     VNGFCKEVFKKLPMEFAVEAQKLLSVNLEGAIG"
BASE COUNT          365 a          453 c          434 g          325 t
ORIGIN      
        1 cgctggcacc gagctcgatt acacccgtga gggcttaaat gaaggcttca aattccataa
       61 tcccaatgtc aaagccacct gtggttgcgg tgaaagcttt aacgtttaat cgataggagg
      121 ctctccaatg gcagtccccc actctcaatc catggaagca ctggtcaacc ggacctatga
      181 ggcgggcttt tataccgatc tcgagtcaga caccgcccca cccggtttaa acgaaggcat
      241 cattcgcttg atctccgaca aaaagcagga gcccgaatgg ctactggaat ggcggcttgc
      301 ggcccttcgt cactggctga caatgacgga gcccaagtgg gctacggtgc agcatccgcc
      361 gatcgactat caggctatct cttattattc ggcccccaga tctaagaacg atggaccgaa
      421 gagcctggat gaggtggatc ccaagctgct cgagacctat gaaaaacttg ggatcccctt
      481 gcgcgagcgg gagttgctcg ccggggtcgc ggttgatgca gtgttcgaca gcgtctcggt
      541 cgcgaccacc tttaaagaga agctggcaga ggcaggcgtc atcttctgct ccttctcgga
      601 ggccgtgcaa aggcatccgg atctggtgcg gcaatacctc ggaacggtgg tgccgatcac
      661 cgataatttt tttgcggcgc tcaactccgc agtcttctcc gacggctcct tctgctatgt
      721 ccccaaaggc gtgcgctgcc caatggagct atcgacctat ttccgtatca atgcccttaa
      781 cacaggccag tttgaacgga cactcattat cgccgaggag ggcagttatg tgagttatct
      841 cgagggctgt accgccccta tgcgcgatga aaaccagttg catgcagccg tggtcgaact
      901 catcacctta gatcgcgccc agatcaaata ctccaccgtg cagaactggt atccagggga
      961 cgagcagggc cggggtggca tctacaactt cgtgaccaaa cggggcgagt gccgcggcgc
     1021 gcattccaag atctcctgga cccaggtcga gaccggctct gccatcacct ggaaatatcc
     1081 gagctgcatc ctccgcggag ataactcggt cggcgcgttt tattccgtgg cactgaccaa
     1141 ccactaccag caggccgaca ccggcaccaa gatgatccat ctcggtcgca ataccaagag
     1201 cactattatc tcaaagggtg tatccgccgg ccggggacag aatgcctacc gggggctggt
     1261 caagatagcc aaaggcgcgg agaacgcccg taactatacc caatgcgatt cattgctcat
     1321 gggagaccgt tgcggcgccc ataccttccc ctatatcgag gtcaagaact ccaccgccca
     1381 agtcgagcac gaggcctcga cctcgaagat cagcgaggat cagttattct attgccaaag
     1441 ccgcgggatc gccgaagagg atgcggtcac tatgatcgtc aacggcttct gcaaggaggt
     1501 cttcaagaag ttgccgatgg agttcgcggt ggaagcacaa aagcttctaa gtgtgaacct
     1561 ggagggggcg attggtt
//
LOCUS       DASQSL010002085         1573 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_95531, whole genome shotgun sequence.
ACCESSION   DASQSL010002085 DASQSL010000000
VERSION     DASQSL010002085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1573
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95531"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..207
                     /locus_tag="VE844_20980"
     CDS             <1..207
                     /locus_tag="VE844_20980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03720.1"
                     /translation="WNQAILNPEIHALHLSLLPERSLSRRHRNYLEGLSLHVLDEGSE
                     ALTALEQRALLSDRRSLTKLHTLI"
     gene            266..757
                     /locus_tag="VE844_20985"
     CDS             266..757
                     /locus_tag="VE844_20985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011767095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HZC03721.1"
                     /translation="MSLQRLSYLLIFLVCAGLLGFGYYLEYGKGLDPCPLCILQRLFF
                     LVIGLGGLIAALHNPKSLGIRIYSGFLVLLSVMGATVAGRQAWLQHLPPDQAPECGPG
                     LEYMLEIYPLGETLVKILKGTGDCAEVDWTFLGLSIAEWALISFIVLTAVSVLQLWKA
                     GSK"
     gene            820..>1573
                     /locus_tag="VE844_20990"
     CDS             820..>1573
                     /locus_tag="VE844_20990"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HZC03722.1"
                     /translation="MLRHHDRAHAEFLTALTFLGTALLLRLPALLYSVINFDESLYLL
                     IGEQLTEGILPFTGLCDRKPFGLFALFGLFAAMPFDAIIASRLGASITVGLTAYMLHR
                     IAGLLFDDEDRLIGPAAGLAYVVFSLANGGMASNSEVFLSMFTALGLLLALLAVRGAE
                     RPRLGLMLTAGLVLGLGVQVKQTILFDMLAFLVGFYLLTTARLADLGLHLRATAPSLA
                     ALAAVSALPTIAVIVLYVVTGHWSDWAMANLAA"
BASE COUNT          272 a          477 c          441 g          383 t
ORIGIN      
        1 tggaaccagg caatcctcaa tccagagata catgccttgc atctgagtct cctgccggaa
       61 cgaagcctga gtcggcggca tcgaaattat ctcgaaggct tgagcctgca tgtgctggat
      121 gagggatctg aggcgctgac ggcgctagag caacgtgctc tcctctccga tcgcaggagt
      181 ctcacaaagc tccataccct gatctaggcc caatcgggca gcggcaatga aatgctctct
      241 tcctaagcgt ggataagatg ttcttatgag tttgcagcgt ctcagctatt tactgatctt
      301 tcttgtatgc gcaggtctcc tgggctttgg ctattatctc gagtatggca aaggcctgga
      361 tccctgcccc ctgtgtatac tccagcgcct gtttttcctg gtgatcggtt taggtggcct
      421 gatagccgcc ctgcataatc ccaaaagcct tgggatcagg atttatagtg gcttcctggt
      481 gctgctctca gtgatgggcg ccaccgtggc gggtcgtcaa gcctggttgc aacatctgcc
      541 acccgatcag gcccccgaat gcggtccggg attggaatat atgctggaga tttatcccct
      601 gggcgaaacc ttggttaaga tcctcaaggg aacgggtgat tgcgcggagg tagactggac
      661 gtttttgggg ctctctatcg ccgaatgggc gcttatatcc ttcattgtgt tgaccgctgt
      721 cagtgtactt cagctttgga aggctggatc taaataggta ttataaaaaa agcccccgct
      781 cttgggggct ttttcacgag tctcaaactt gataatgcct tgctgagaca tcacgaccgt
      841 gcccatgccg agttcctcac ggcgcttacc ttcctcggta cagcgttgct gctgaggctg
      901 ccggccctcc tctactcagt cattaacttc gacgagagct tatacctgct aatcggcgag
      961 cagctgaccg aggggatcct gcccttcacc ggcctatgcg accgtaagcc gttcggcctc
     1021 ttcgctctat tcgggctgtt cgccgccatg ccgttcgacg cgatcatcgc gagccgcctc
     1081 ggcgccagca tcacagtcgg gctgactgcg tacatgctgc atcgtatagc gggtctcctc
     1141 ttcgatgacg aggaccggct gatcgggccg gcggccgggc tcgcctacgt cgtcttcagc
     1201 ctcgcgaacg gcggcatggc atcgaactcc gaggtatttc taagcatgtt cacagcgcta
     1261 ggccttctgc tcgcgctctt ggccgtccgc ggcgccgaac gcccccgcct cggcctcatg
     1321 ctcaccgcgg gcctcgtcct cggtctcggc gtgcaggtga agcagaccat cctgtttgat
     1381 atgctggctt tcctcgtcgg cttctaccta ctgaccacgg cgcgtcttgc ggatcttggc
     1441 ctccaccttc gcgccacggc gccaagcctg gcggctctcg ccgccgtgtc cgcgctgccg
     1501 acgattgcgg tgatcgtgct ctatgtcgtc accggacact ggagcgactg ggcgatggcg
     1561 aacctcgcgg ccc
//
LOCUS       DASQSL010002086         1240 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_39716, whole genome shotgun sequence.
ACCESSION   DASQSL010002086 DASQSL010000000
VERSION     DASQSL010002086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1240
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39716"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..586)
                     /locus_tag="VE844_20995"
     CDS             complement(<1..586)
                     /locus_tag="VE844_20995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HZC03723.1"
                     /translation="MRLDKPIGIFLLLWPTLWALWIAGNGQPDPLVAVVFISGVVLMR
                     SAGCVINDLADRDFDSHVKRTRDRPLASGKVSPEEALRLFSLLITGAFLLVMLMNTLT
                     IVLSFVGALLAATYPFTKRYIHLPQVHLGLAFGWAVPMAFAAQTGTVPKIAWLLLIAT
                     LLWAVAYDTMYAMVDREDDIRIGVKSTAILFDDAD"
     gene            complement(736..1122)
                     /locus_tag="VE844_21000"
     CDS             complement(736..1122)
                     /locus_tag="VE844_21000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005965949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HZC03724.1"
                     /translation="MSRHIITTDKAPQAIGTYSQAVKVGNTVYLSGQIPLEPATMQLL
                     EGDMRSQIVRVFENLKAIATAAGGSLADIVKLTVYLTDLNHFPLVNEVMATYFKEPYP
                     ARAAVGVAQLPKGATVEMDAIMVIDG"
BASE COUNT          292 a          340 c          347 g          261 t
ORIGIN      
        1 ggtcagcatc gtcaaacagt atggccgtcg atttcacccc gatccggata tcatcctcgc
       61 gatcgaccat ggcatacatg gtgtcatagg ccacagccca aagcagcgtg gcgataagca
      121 gcagccaggc gatcttcggc accgtgcccg tttgcgcggc aaaggccatg gggaccgccc
      181 agccaaaagc caggcctaga tgcacctgag gcagatggat atagcgcttg gtaaacggat
      241 aggtggcggc aagtagagcg cccacaaagg agagcacgat ggtcagagta ttcatcagca
      301 tcaccagcag aaacgccccg gtgatgagca ggctaaacag ccgcagggcc tcctcgggac
      361 tgaccttgcc actggcgagg ggacggtcgc gggtacgttt gacatggcta tcgaaatccc
      421 gatcggcaag atcgttgatc acgcatcccg ccgagcgcat cagcacgacc ccgctaataa
      481 acacgacggc gaccaaaggg tccggctgcc cattcccggc gatccaaagg gcccaaaggg
      541 tgggccaaag cagtagaaag atcccgatcg gtttgtcgag ccgcatcaag cggacatagt
      601 ttcgccactg ttccttattt ggccaccgcg gtgattccct tactctagga gtcgccaatt
      661 tctgccggga gcgctggcta gccgagttcg agctagcttt taattccata ttcataggct
      721 gccataacgc accacctacc catcgatcac catgatcgca tccatctcga cggtagcgcc
      781 cttgggcaat tgcgccaccc cgacagcggc gcgagcggga tagggttctt tgaaataagt
      841 agccattact tcattgacga ggggaaaatg attcaagtcg gtcagataga cggtcagctt
      901 gacaatatcg gccaaggaac cgcccgctgc tgtggcaatc gctttgaggt tttcaaaaac
      961 gcgcacaatc tggctccgca tgtctccctc gagcagttgc atagtagccg gctcaagcgg
     1021 gatctgtcca gatagataga cggtattacc taccttaacc gcctgggagt aggttccaat
     1081 cgcctgtggc gccttgtcag tagtgatgat gtgacgactc atgataacta tcctttgtgg
     1141 tcgtgcgtct agagtgcgct tttatgaagg tttaggattg tataggctcg gcctattgat
     1201 tggaaaatac cgaattacta gtttgcgggc ggggtcgtgt
//
LOCUS       DASQSL010002087         1077 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_174862, whole genome shotgun sequence.
ACCESSION   DASQSL010002087 DASQSL010000000
VERSION     DASQSL010002087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174862"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1071)
                     /locus_tag="VE844_21005"
     CDS             complement(<1..1071)
                     /locus_tag="VE844_21005"
                     /inference="COORDINATES: protein motif:HMM:NF040057.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative LPS assembly protein LptD"
                     /protein_id="HZC03725.1"
                     /translation="MERRPAENFLRFQGSVDIQYGDSRIFADVVELNTETGDGTAEGH
                     VRFEDPQQQVTAEHAEFNLFTRTGTLYQAKGSIRGESPEPRMGEAAQPVTFYLAAERF
                     VRETERRSRIRRGSFTTCVGPDPVWQFKARHSVIEQEGYAHLSHATFWIKNVPIFYTP
                     YFLFPTKTERATGFLPPGFGTSEKLGFFLENRFFWAINEQSDTTIGADYLSKRGIRPS
                     LEYRYALSEADRGQFNGLFLDDDLTGVQFWKISGTSQQHLPSQIRGILALDLMSQDNY
                     DRTFEVENLLARTRRETNSYLSFIRNWRNAGVELHAQRLEDAENRADERLTRYPDLGF
                     DLVPTPLPWGHFSFGLGALASIF"
BASE COUNT          230 a          289 c          321 g          237 t
ORIGIN      
        1 gaagatagat gctaaggccc ccaggccaaa gctgaagtgg ccccagggaa gtggggtcgg
       61 gactagatcg aagccgagat ctggatagcg tgtgagccgt tcatcagccc gattctccgc
      121 atcttccagc cgttgcgcgt ggagctctac gccggcgttg cgccaattac ggataaaaga
      181 caagtaggag ttggtctcgc ggcgtgtgcg cgccagcaaa ttctcgactt caaaggtgcg
      241 atcgtaattg tcctgactca tcaggtcgag ggcgaggatg cccctgatct ggctggggag
      301 atgttgctgg ctcgtcccag aaattttcca gaattgcaca cctgtcaagt catcatccaa
      361 gaagaggcca ttgaattgcc cgcggtccgc ttcactgagt gcatagcgat attccagact
      421 cggacggatc ccccgtttgc tcaggtaatc ggcgccgata gtggtatcgg attgttcatt
      481 gatggcccag aagaagcggt tttccagaaa aaatccgagt ttttcgctgg tgccgaagcc
      541 tgggggcaga aaaccggtgg cgcgctctgt tttagtcggg aagagaaaat agggtgtata
      601 aaagatgggg acgttcttaa tccagaatgt ggcgtgcgac aggtgggcgt agccctcttg
      661 ctcgatgacc gaatgccggg ctttgaactg ccagacggga tctggcccaa cgcaagtggt
      721 aaaactgccg cgcctgatgc gagagcgcct ttctgtctct cggacgaaac gttcagccgc
      781 gaggtaaaac gtcaccggtt gagccgcctc gcccatgcgt ggctcgggac tttcccccct
      841 gatagaccct ttggcctgat aaagcgtgcc ggtgcgtgtg aataggttaa attccgcgtg
      901 ctccgccgtg acttgctgtt gagggtcctc aaagcgcaca tgcccttcgg ccgtgccgtc
      961 gccagtctct gtgttcaact caacaacgtc cgcgaatatg cggctgtcgc cgtattgaat
     1021 gtcgaccgac ccctgaaagc ggaggaaatt ctccgccgga cgccgctcca ggtaatc
//
LOCUS       DASQSL010002088         1228 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_95569, whole genome shotgun sequence.
ACCESSION   DASQSL010002088 DASQSL010000000
VERSION     DASQSL010002088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1228
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95569"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            230..1021
                     /locus_tag="VE844_21010"
     CDS             230..1021
                     /locus_tag="VE844_21010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011481257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HZC03726.1"
                     /translation="MRTIPWLTAAVVGLLIAGCASVASAASQEERLALAPTGKLRVAL
                     YLGAPASIIRGATPDESKGVGFDLGKELARRIGVPFEPVVYPSPGAIMGGLKSGEWDL
                     TFFGPTPERESVLNFTAPFLVIEHGYLVPAGSPISTIDAVDRPGTRIGAPQGGSVNAF
                     LARTIKNATVIASPSVPAGEEMLKSGKADVFAANKANLFGLSDKMPGSRVLDGRIGVD
                     EVAIALPKGRETGMAFVRKYIEDAKSEGLIKAAVQRAGLRGAADK"
BASE COUNT          249 a          348 c          381 g          250 t
ORIGIN      
        1 cccagggcac gaatgcctct aactgtcgag aagaaaatgg ctttctacta acttcatgcc
       61 attcgcccaa gagcccgtat ttgggctatt atgctgaaaa atttccatat aagccgccct
      121 aatggaagat tagatcgaca ccgcgcgcag ggctgctggg caggttatgt ggaaatattt
      181 ccatatactc aagagttaga gagcaaccgt aacatcaacg gaggatgcaa tgagaacgat
      241 tccttggctt actgctgcgg tagttggact tctgattgca ggttgcgcga gtgtcgcttc
      301 cgcagctagt caggaagagc gactggccct ggccccaacc ggcaagctcc gtgtagcgct
      361 ttatctcggg gcgcccgcgt ccatcattcg cggtgccacg ccggacgagt cgaagggggt
      421 ggggttcgat ctgggcaagg agcttgcccg gcgcattggg gttccattcg agcccgtggt
      481 gtacccctcc ccaggggcta tcatgggcgg cctgaagtcc ggcgagtggg acctcacctt
      541 ttttgggcca accccggaac gcgaaagtgt cttgaatttc actgcaccgt ttctcgtcat
      601 cgagcacggc tacctcgttc ccgccggctc tccgatctcg accatcgacg cagtggatcg
      661 accgggaacg cgcatcggtg cgccgcaggg cgggtccgtg aacgcatttt tggcgcgcac
      721 aatcaagaat gccacggtga tcgcgagtcc gagtgttccc gccggggagg aaatgctgaa
      781 gtccggaaag gcggatgtct tcgccgccaa taaggcaaac ctgttcgggt tgtcggacaa
      841 gatgcccggg tcccgggttc ttgatggtcg gattggtgtg gacgaagttg ccatagcact
      901 cccgaagggc cgggagaccg ggatggcctt tgtgcgaaag tacattgagg acgcgaaatc
      961 cgaaggacta atcaaggcgg cggttcaaag agcgggactg cgcggcgcgg ctgacaagtg
     1021 atatcgacaa cgctctctaa cccgccgatg aacacggacc ctcaccagcg gcaatctctt
     1081 gccgccggct cgggccggtt atcggcaacg ttgggcgtca ctcccccaca gatgtcaagg
     1141 aggtcggctc ttcggcactt gtggtgagcc atgtcagacg atggctcgaa gcctcccggc
     1201 cccctcgcgg caggctgggt gcgctcgg
//
LOCUS       DASQSL010002089         1520 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_202679, whole genome shotgun sequence.
ACCESSION   DASQSL010002089 DASQSL010000000
VERSION     DASQSL010002089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1520
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202679"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1469)
                     /locus_tag="VE844_21015"
     CDS             complement(<1..1469)
                     /locus_tag="VE844_21015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015213479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I polyketide synthase"
                     /protein_id="HZC03727.1"
                     /translation="MVSHLAEMLGINRSEIDRRQPFASFGLDSAQTVSLIGDLEAWLG
                     RSLSPTLAWEFPTIKALAEHLAGEATTPAPVYKIDTPSRLDSEPIAIIGLGCRFPGAG
                     DPEAFWRLLRDGVEAITEVPRDRWDVNAFYDLNPATPGKMNTRWGGFLEQVDLFDPHF
                     FGISPREAASMDPQQRLVLEVSWEALENAGQTAEELADSQTGVFIGISTNDYSRRQLG
                     DPAANDAYAGTGNALSIAANRVSYLLDLRGPSLAIDTACSSSLVAVHYACQSLRNGEC
                     SLALAGGVNLILSPELTVTFSQARMMASDGRCKTFDAEADGYVRGEGCGIVVLKRLSD
                     ALKDADTIRAVVRGSAVNQDGRSNGLTAPSGTAQQAVIRQALDNAGVPPDQVCYVETH
                     GTGTPLGDPIEFRALAAVLGEGRAPDQPCVLGSVKTNIGHLESAAGIAGLIKGVLVLQ
                     NEEIPPHLHLKKINPHLPLEHTPFVIATERRSLTQGTKPR"
BASE COUNT          325 a          469 c          417 g          309 t
ORIGIN      
        1 cgaggctttg ttccttgagt caacgaacgc cgctcggtgg cgataacaaa aggggtatgc
       61 tctagcggga ggtgcggatt tatctttttc aaatgtagat gaggaggaat ttcctcattc
      121 tgtagcacca gcactccctt gatcaggcca gcgatcccgg ctgccgactc caaatggcca
      181 atattcgtct taactgagcc gagcacacag ggctgatcag gtgcacggcc ctccccgagc
      241 accgctgcga gggcccgaaa ctcgatagga tcacccagcg gtgtgcctgt gccatgcgtc
      301 tccacataac aaacttgatc ggggggaacg ccggcgttgt ccagggcctg acggatgacc
      361 gcctgttgcg cagtgccact gggcgcggtc aacccattgc tgcggccatc ctggttgacc
      421 gctgagcccc gcaccaccgc ccggatcgtg tccgcgtcct tcagtgcatc cgaaaggcgc
      481 ttgaggacca cgattccaca gccctcgccg cgtacgtaac cgtcagcctc tgcatcaaag
      541 gtcttacagc gtccgtcgga ggccatcatg cgggcctgag aaaaggtgac ggtcaactcc
      601 ggagatagga tcaggttcac tcctcctgcc agggccaggc tgcactcgcc gttccgcaag
      661 ctctggcaag cataatgaac cgctaccagt gacgatgagc acgctgtatc tattgcgaga
      721 ctgggccctc gcagatcaag cagataagag acccggttgg ccgcaatact gagggcgttg
      781 cctgtgccgg cataggcgtc attggccgcc ggatcaccga gttgacgccg ggaataatca
      841 ttggtgctga tcccgatgaa cacccccgtc tggctatcag ccagctcctc ggccgtctgg
      901 ccggcgtttt ccaaggcctc ccagctcacc tccaggacca gccgttgctg agggtccatg
      961 ctagctgcct ccctaggcga gatgccaaag aagtggggat caaacaggtc tacctgctcc
     1021 aggaacccgc cccagcgagt attcattttc ccgggtgttg ccggattcaa atcgtagaag
     1081 gcattgacat cccacctatc cctcgggacc tcggtgattg cctccacccc atctcgcaag
     1141 agacgccaaa atgcctctgg atccccggct ccaggaaaac ggcagccaag accaatgatc
     1201 gcaatgggct ccgagtcaag ccttgatggc gtatcgatct tgtaaacagg cgctggcgtg
     1261 gtggcttctc cggccagatg ctcagccagc gcttttattg taggaaactc ccatgccagc
     1321 gttggagaca atgaacggcc cagccaggct tccagatctc cgataagact cacagtctga
     1381 gcagagtcca gaccaaagct ggcaaacggt tggcgccggt caatctcgct acggttaatc
     1441 cctagcatct cggcgagatg tgaaaccaac cacgtctcaa tgatcccaga gtttgggctt
     1501 ttggtcagtt cgtctatatc
//
LOCUS       DASQSL010002090         1080 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_95605, whole genome shotgun sequence.
ACCESSION   DASQSL010002090 DASQSL010000000
VERSION     DASQSL010002090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95605"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            31..>1080
                     /locus_tag="VE844_21020"
     CDS             31..>1080
                     /locus_tag="VE844_21020"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013050969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HZC03728.1"
                     /translation="MRTSIFGSTICSYCRVPFATLLLAGYTFGLPLDAAALAVTRGPY
                     LQLGTQSSIVVRWRTDAATDSRVRYGTSPTELRNVVDDAAITTEHVVKLTGLNPATQY
                     YYSVGNSTATLAGDDGKHVFVTAPTPGTEQPTHIWIVGDSGTAKSNARAVRDAYLNYK
                     GSRNTHLWLMLGDNAYVDGTDSEYQAALFDMYPTLLRQTVLWPTLGDRDGHMADSGSQ
                     SGPYYDIFTLPKQGEAGGVASGTEAYYSFDYANIHFVVLDSVETSRAPTGAMLTWLKN
                     DLAATTQPWVIAYWHYPPYSKGLHDFNSEIRLGEMRQNVLPILEEAGVDLVLSGHSAS
                     YERSFLIDGHYGTFST"
BASE COUNT          225 a          325 c          306 g          224 t
ORIGIN      
        1 atagagattc gctagcagaa ggtagtgaac atgaggacga gtatatttgg atcaaccatc
       61 tgcagctatt gcagggtacc tttcgccacg ttgctcctgg ctggctacac cttcgggctg
      121 cccttagatg ccgcggcgct ggctgtaacc cggggtcctt acctgcaact cggaacccaa
      181 tcgagcatcg tggtgcgttg gcgtaccgac gccgcaactg acagccgcgt gcgctatggg
      241 actagtccga ccgaattgcg caatgtggtc gatgatgcgg ccattaccac cgagcatgtg
      301 gtcaagctca ccggtctgaa cccagcgact caatattatt attcggtagg caacagcacc
      361 gcgacactcg cgggggatga cgggaagcat gtcttcgtga ccgcacctac cccgggaact
      421 gaacagccca cccatatttg gatcgtgggc gactcgggga ccgcgaaatc caacgcccgg
      481 gccgtgcgcg acgcctacct caactacaag ggcagccgca atacccatct ctggctgatg
      541 cttggcgata acgcttacgt agacggcacc gacagcgagt accaggcggc gctcttcgat
      601 atgtatccga cgctccttag gcagacagtg ctctggccga cccttggcga tcgcgatggg
      661 cacatggcag actcgggctc ccagagtgga ccctactacg acatttttac tctccccaag
      721 cagggtgagg ccggtggcgt agcctcgggt acggaggcct attattcctt tgactacgct
      781 aacatccact tcgtcgtgct ggactccgtc gagactagcc gggcccctac tggagcgatg
      841 ttgacctggc tgaaaaatga tctggctgcc accacccagc cttgggtcat cgcctactgg
      901 cattaccccc cgtactcgaa aggcttacac gacttcaata gcgagatacg gctcggcgag
      961 atgcgccaga acgtgctgcc gatcctcgag gaggcgggcg tggacttggt gctaagcggt
     1021 catagcgctt cctatgagcg ttcattcctg atcgatgggc attacggcac cttcagtact
//
LOCUS       DASQSL010002091         2112 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_39796, whole genome shotgun sequence.
ACCESSION   DASQSL010002091 DASQSL010000000
VERSION     DASQSL010002091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39796"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1048)
                     /locus_tag="VE844_21025"
     CDS             complement(<1..1048)
                     /locus_tag="VE844_21025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020158904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 family metallopeptidase"
                     /protein_id="HZC03729.1"
                     /translation="MQLKSEHIYPRMMELRRTFHREPELAFEEVRTAQIIMAELKHLG
                     IPYEYMGQGGGVIGRLTGGGNHASTVALRAEMDALPGEESTDLPFASRIKGKVHACGH
                     DAHMAMVLGAAALLKESPPEGNILFVFQPAEERGGGARVMLESGLLKGVSAIFGGHVT
                     HHYRVGEIMVAEGVITAQSDRFHIKIQGKGGHGARPHEAIDAVAITGLLIMATQALVS
                     REINPVYPSVVTIGRVQAGTAPNVIADTAVLEGSIRTTLPEVRDHLHRGLHRIAKALG
                     ELHNARIEVTIDSGYPPVINTRREAKIAHRAAAKVVGSSRVMVMDHPSMGSEDFSYYL
                     KELPGCYVRFGARIE"
     gene            1321..>2112
                     /locus_tag="VE844_21030"
     CDS             1321..>2112
                     /locus_tag="VE844_21030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03730.1"
                     /translation="MSQRYPDINSPQFGQQTRSTLVELVLAHLPLGIDGRKIDDRLAW
                     DILCYASVKRSSIESACLELADAPSGNTTREHLDAALDPSRAGMRELEAQLNQILRAQ
                     LPKPVLRWISRRRVENAADLVEIPYHGQAAQDDDEVRRGAASDGTTHFHMYPTLAIVH
                     SGQRFTLAMTFVWAGETLEVVLARLIKLARKLGVRFKAALLRQRLLLGRGAAVVEAAT
                     RALHHTDSGARWRRRDQRLVLWAAQLLEALYLQSRHASGIHHHRGD"
BASE COUNT          424 a          632 c          614 g          442 t
ORIGIN      
        1 cctcgatgcg cgcgccaaag cggacatagc aaccggggag ttccttaagg taataggaga
       61 agtcctccga gcccatgctg gggtgatcca tcaccatcac cctgctactg cccacgacct
      121 tcgccgccgc acggtgggcg attttcgcct cgcgcctggt gttgatcacg ggcggatagc
      181 cagagtcaat cgtgacctcg atccgggcgt tgtgcagctc acctagcgcc ttcgcgatac
      241 ggtgcagacc ccggtgaagg tggtcgcgta cctccggtag cgtagtccgg atcgaccctt
      301 ccaggaccgc cgtatcggcg atcacgttgg gcgcggtgcc cgcctgcact ctcccgatgg
      361 tgaccactga agggtagacc ggattgatct cccgcgacac caaggcttga gtggccatga
      421 tcaggagacc ggtgatggcc acagcatcga tggcttcatg cgggcgcgca ccgtgcccac
      481 ctttgccttg tatcttgatg tgaaagcggt ccgactgggc cgtaatcact ccttcggcca
      541 ccatgatctc gcccaccctg tagtggtgag tgacatggcc gccgaagatc gcgctcactc
      601 ccttgaggag acccgactcc agcatgaccc gcgcaccgcc gcccctctcc tctgctggct
      661 ggaacacgaa gagaatgttg ccctcgggcg gcgattcttt aagaagcgcc gcagcgccca
      721 gcaccatagc catatgggca tcatggccgc aagcatggac cttgcctttg attcttgagg
      781 caaagggcag gtcggtgctc tcctcgcctg gtagcgcatc catctctgcg cgcagagcga
      841 ccgtggatgc atggttccca ccgcctgtga ggcgaccgat cacgccgccg ccctggccca
      901 tgtattcgta agggatgccg aggtgcttca gctcggccat gatgatttga gctgtgcgca
      961 cctcttcgaa cgctagctcc ggctcgcgat ggaatgtgcg ccgcaactcc atcatgcggg
     1021 gatagatgtg ctcggacttt aactgcacgt cgcctcctct cctttatcaa aaccgaaggc
     1081 ttcattggcc tcgcgctcat aggacaagcg ccaatcaaga cgtttgaact ttgagccggt
     1141 catgtttcac gcccattttc ctcgtatcta tactatgtag gcacataagg tgaagaatgg
     1201 ttgataggga accttgcaag aataaccagt agatcacgaa atgatgaata agtaaccaca
     1261 agtaagacac tgacttatgc catgatctcc gattacaaaa ttaccctgcg gaggtcatag
     1321 atgagtcagc gttaccccga cattaacagc ccccagtttg ggcagcaaac tcgctccacc
     1381 cttgttgagt tggtgcttgc gcatctgcca ctgggcattg acggacgcaa aattgacgac
     1441 cgcttggctt gggatattct ctgttacgcc tcggtcaaac gtagctcgat cgagagcgcc
     1501 tgtttggagt tggccgatgc tccatcgggc aacaccacgc gcgagcatct ggatgcggcg
     1561 cttgatccct cgcgcgcagg aatgcgcgag ttggaggcgc aactgaatca aatactgcga
     1621 gcgcaactgc cgaagccggt gctgcgctgg atcagccggc gacgggtcga gaatgccgcc
     1681 gatttggttg agattcccta ccacgggcaa gcggcccagg atgacgatga agtgcggcgc
     1741 ggggcggcca gtgatggcac gacccacttt catatgtacc ccacactggc tatagttcac
     1801 agcgggcaac gcttcaccct ggcaatgacc tttgtttggg ccggtgagac gctggaagtt
     1861 gtgctggcgc gcctgatcaa gctggcgcgc aaacttggcg tgcgcttcaa agcggctcta
     1921 ctgcgacaaa ggcttttgct cggtcgcggt gctgcggttg ttgaggcggc aacgcgtgcc
     1981 ctacatcata ccgattccgg cgcgcggtgg cgcaggcggg atcaaaggct tgttttatgg
     2041 gcggcgcagt tactcgaggc gctatacctt caatcgcggc acgcgagcgg catacaccac
     2101 caccgtggtg at
//
LOCUS       DASQSL010002092         1327 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_95616, whole genome shotgun sequence.
ACCESSION   DASQSL010002092 DASQSL010000000
VERSION     DASQSL010002092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1327
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95616"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(28..219)
                     /locus_tag="VE844_21035"
     CDS             complement(28..219)
                     /locus_tag="VE844_21035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03731.1"
                     /translation="MTKFKDGDKVKVIDAPEDKQHLIGKIGRVRPPQGFDYDQDLVFV
                     SFDEGIRDGFAEHQLEKIE"
     gene            complement(554..928)
                     /locus_tag="VE844_21040"
     CDS             complement(554..928)
                     /locus_tag="VE844_21040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03732.1"
                     /translation="MITAHQRLFGPDTLTSFGTDKGYYSGANRTYLQSMEGLEEFCLQ
                     QPGLDTSRLSESDMETLTRLANRRAGIEPLLGHAKQGGQLGQSRMKTDETTLAAGYGS
                     IGGFNLRQLIRHLLSKGIRPMR"
     gene            927..>1327
                     /locus_tag="VE844_21045"
     CDS             927..>1327
                     /locus_tag="VE844_21045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03733.1"
                     /translation="MGRTEALSSIRSEVHAPPSRKFPPHASKLEDTPEVQALCTLAFV
                     ETADGFRMGREGFVRHHHSTTHKTRHVEEKIGAVLVHLLKLPPNVPGHPLHIVVKQDI
                     EILSHVANLGKRLVPEILKRPLCVLRMLTVA"
BASE COUNT          268 a          372 c          366 g          321 t
ORIGIN      
        1 aggtcgatct tcaaagcttc gtgctggcta ttcgatcttt tctagctggt gctctgcaaa
       61 accgtctctg ataccttcat caaacgagac gaatacgaga tcctgatcgt agtcaaagcc
      121 ctgcggtggc cggactctgc cgatcttacc gattagatgt tgcttgtctt caggggcatc
      181 gatgactttg accttgtcgc catctttaaa cttcgtcatg agtgactctc cttggtagtc
      241 ggcggtttct tcctggctga gggaaacgta ggctagccat gctgcggagt tgcgggtgag
      301 cccgagacat tcgagacggt cggggggtaa ggtgcatgtc agtggcccgt cagggccgtt
      361 ccccggcgag agagaaccgg cctcgttttc agtatcgttg tctcttgttt tctgtgtcag
      421 actggcctga cagggggtgt tactgacccg tgcataaata gtcgctggcg cgaaattcga
      481 aacatctgcc atcctgaggc cttgagatat ttccgcatcc ctgtccgatc gcttccaagc
      541 tcagggcgat acgttatcgc atcggtctga tacccttgct cagcaagtgg cggatgagtt
      601 gccgcagatt gaacccccct atcgagccgt atcccgctgc cagggtcgtc tcatcagttt
      661 tcatgcgact ctgaccaagc tgaccaccct gtttggcatg gccgagcaag ggttcgatcc
      721 cggcccggcg atttgcaagg cgagtaaggg tttccatgtc gctttccgac agacggctgg
      781 tatcgaggcc gggttgctga aggcaaaact cctccagccc ttccatggac tggagatacg
      841 tgcgattggc tccgctgtaa tagcccttgt ccgtgccgaa tgacgtcaac gtatctgggc
      901 caaagagccg ctgatgtgct gtgatcatgg ggcgtaccga ggctttgtct tccatccgga
      961 gtgaagtaca cgcgcccccc agcaggaagt tcccccccca tgcgtccaag ctggaagaca
     1021 cgcccgaagt acaggccctg tgcacgcttg cctttgttga aacagctgac ggctttcgca
     1081 tgggacgaga gggctttgtc aggcaccatc actccacgac acataaaact cgccacgttg
     1141 aggaaaagat tggagcagtg ctcgttcacc tgctcaaact cccgccgaat gttccagggc
     1201 atccgctcca tatcgtagtc aagcaggaca tcgaaatatt gtctcacgtg gctaatctgg
     1261 gtaaacgcct cgtgccagag atcttgaaac gcccgctgtg tgtgctccgc atgctgacgg
     1321 tcgcaaa
//
LOCUS       DASQSL010002093         1446 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_174945, whole genome shotgun sequence.
ACCESSION   DASQSL010002093 DASQSL010000000
VERSION     DASQSL010002093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1446
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174945"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..299
                     /locus_tag="VE844_21050"
     CDS             <1..299
                     /locus_tag="VE844_21050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03734.1"
                     /translation="LHQLGALSEEELRALAKQTELGEGFLIGLRNRWQQGRRLATVGE
                     ETRKKLNQEGVRTIEDVAFLSPERIQQIATKQHLDPDVLTAYSEACKRQWRQAA"
     gene            442..909
                     /locus_tag="VE844_21055"
     CDS             442..909
                     /locus_tag="VE844_21055"
                     /inference="COORDINATES: protein motif:HMM:NF024736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03735.1"
                     /translation="MMSTTAHQPATTPIPVQLSEPEFEEFIFPHLSMPKRGPKCKLGY
                     HRVFNLILWVLYTGMQWKCLPVPKDPTGKPAIHYTTVYKVFAKWADDGSLWQAFTASV
                     RHLADQKHLDLRVLHGDGTNTVAKKGEMGSGIRGTNTRRARRSSRSRTTMGMS"
     gene            834..1316
                     /locus_tag="VE844_21060"
     CDS             834..1316
                     /locus_tag="VE844_21060"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03736.1"
                     /translation="MGYSGYKHQKGEKVVAITDNHGYVLAPVPVAPLNETDMVLLPQG
                     LKALKQVAKEVRVDLRGAYVNLDGGFDSRHNRKMIFNAGMIPNIKENPRHRKTTKRGR
                     KRFFNEAIHALRMHVERTFAWEDKFKRLLLRFERIQQRHYGMKLMAYTLINLREFCGV
                     "
BASE COUNT          353 a          394 c          409 g          290 t
ORIGIN      
        1 acctacatca gcttggagcg ctctcagagg aagagctgag ggcgctagcg aaacagaccg
       61 agctgggtga gggcttttta atcggcctcc gaaaccggtg gcagcaggga aggcgactgg
      121 cgactgtggg agaggagacg cggaaaaagc tgaatcagga aggcgtaagg actatcgagg
      181 acgttgcttt cctgtcgcct gagcgtatcc agcagatcgc tacaaagcag cacctcgacc
      241 cagacgtgct caccgcgtat agcgaagcgt gcaaaaggca atggcggcaa gctgcctgat
      301 aacctctggt ccgtctagcc ttgtttcagc gagctaacat ctaactggtt gcgagttttg
      361 caaatggtcc taacctcttg tagtatctga ggtaatttgc ttctccagtt caccccacca
      421 ttcctcacat gaggccattg catgatgagc accacggcac atcagcctgc aacgacgccg
      481 attcccgtcc aactctccga accggagttc gaggaattta tcttcccgca cctctcgatg
      541 cccaagcgcg ggccgaagtg caaactgggc tatcaccgcg tctttaatct catcttatgg
      601 gtcctctaca cggggatgca gtggaagtgc ctgcccgtgc cgaaagaccc caccgggaaa
      661 ccggccattc actacacgac cgtctataaa gtcttcgcca aatgggccga tgatgggtcg
      721 ctctggcagg cattcactgc cagtgtgcgg catctggcag accagaagca cctcgatctc
      781 cgggtgctcc atggcgacgg gaccaacacc gtggccaaaa aaggggagat gggatcgggt
      841 attcggggta caaacaccag aagggcgaga aggtcgtcgc gatcacggac aaccatgggt
      901 atgtcttagc tcccgtcccc gtggctcccc tcaatgaaac ggatatggtg ctcctgccac
      961 agggtctgaa agccttgaag caggtggcca aagaggtcag ggttgacctc agaggcgcct
     1021 atgtcaacct cgatggcggt ttcgattcca gacacaatcg gaagatgatc ttcaatgcgg
     1081 gcatgatccc caacatcaaa gagaatccgc gtcatcgcaa gaccactaag cgcggacgca
     1141 aacgcttctt caatgaagcg atccatgcgc tacgcatgca tgtcgagcga acctttgcct
     1201 gggaagataa gttcaagagg ctgcttctac gctttgaacg tattcagcaa cggcactatg
     1261 ggatgaagtt gatggcgtat acgttgatta acctacgaga gttctgcggt gtctaaaact
     1321 cgcaaccagt tagtagttat agccaatccg cacacgcccc ggagcgggcg tgaggtggaa
     1381 cgatagcgga gggttttgga gacagctccc acagaggttt cagccggcat aggggccgac
     1441 gtaggc
//
LOCUS       DASQSL010002094         1424 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_39842, whole genome shotgun sequence.
ACCESSION   DASQSL010002094 DASQSL010000000
VERSION     DASQSL010002094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1424)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1424)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1424
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39842"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            209..1156
                     /gene="ribF"
                     /locus_tag="VE844_21065"
     CDS             209..1156
                     /gene="ribF"
                     /locus_tag="VE844_21065"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007040668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HZC03737.1"
                     /translation="MELIRGLNRLGSRQEGCVVTTGNFDGVHRGHQAVLRQLQDIATK
                     RALPKLVITFEPHAQEYFRPDKAPPRLTRWREKFELLRAHGIDQMVCLRFDEHLAALP
                     ARAFVEHVLVAGLKAACLVVGDDFRFGRGREGDYALLEAMATVYGFEVVRAETYTQNG
                     ERVSSTAVRRALGAGDLERARQLLGRYYSISGRIGHGDKRGRALGFATANIDLHRRQS
                     PLRGIFVARVFGIANAGGLPAVAYIGSHSCMKGTRNLLEVHIFDFAQECYGTRVRVEF
                     IKRLRDDKYFDSLEALKHQIAADAERARAILGLKPLSLF"
     gene            1201..>1424
                     /locus_tag="VE844_21070"
     CDS             1201..>1424
                     /locus_tag="VE844_21070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014979801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HZC03738.1"
                     /translation="MMDYKATLNLPKTDFPMRANLAERELKMLKRWQDLAIYQQIRAA
                     RKGCPRYVLHDGPPYANGEIHIGHAVNKVL"
BASE COUNT          293 a          363 c          452 g          316 t
ORIGIN      
        1 gtgcagattg gtttgattga gcggaccgat gagggcttgg ttcaggtacc ctgggatgag
       61 attgacgctc acctgcggct agcggcatga cccaaagccc taaagttgag catcgtctta
      121 ggagcaggac tttcgcttgt acttgcacta tgagagcata accgcgtgat aacccaacat
      181 aaaaagctcc tgagccagta aaccccgcgt ggaactgatc cgtggcctca atcgtcttgg
      241 ttcccggcaa gaggggtgcg tggttacgac cggtaatttc gatggagtgc atcgggggca
      301 tcaggcggtt ttgaggcagc ttcaggatat cgctacaaag cgcgccttgc ctaagctcgt
      361 gatcaccttt gagccccatg ctcaggaata ttttcggccc gacaaggcgc ccccccgctt
      421 gacgcggtgg cgggaaaaat tcgagctatt gcgcgctcac ggcatcgatc agatggtctg
      481 cctgcggttt gacgagcact tggctgctct tcctgcccgg gcctttgtag agcacgtgtt
      541 ggtggctggc cttaaggcag catgcctggt cgtgggcgat gatttccggt ttggcagggg
      601 gcgggagggg gattatgcgc tgcttgaggc aatggccacg gtgtatggat ttgaggtggt
      661 gcgggccgag acttataccc agaatggcga gcgggtgagc agcacggcgg tgcgtcgggc
      721 gctcggggcg ggcgatctgg agagggcgcg gcagttgctc gggcgttatt acagtatcag
      781 tggacggatc gggcatgggg acaaacgcgg gcgcgcgctt ggtttcgcca ccgccaatat
      841 cgatctgcac cgccggcagt cgccgcttcg ggggatcttc gtggcccgcg tttttggtat
      901 agcgaatgca ggcggcttac cggcggtggc ctatatcggc tcacactcgt gtatgaaagg
      961 cacgcgcaat ctgcttgagg tacacatctt tgattttgct caggagtgtt atggtacccg
     1021 ggtgcgggtg gaatttatta agagattgcg ggacgataaa tactttgact ctttagaggc
     1081 gctcaaacac caaatcgcag cggacgccga gcgcgcgcgg gcgatcttgg gcctaaagcc
     1141 actgtcttta ttttaaggta tcgcccgacc tttgcgtcgg gcgcggattg aaacgaaact
     1201 atgatggatt ataaagccac cctgaatcta ccgaagactg atttcccgat gcgggcaaat
     1261 cttgccgaac gggaactaaa aatgctcaag cgctggcagg atctcgctat ctatcagcag
     1321 atccgagcag cgcgcaaggg ctgccccagg tacgtactgc acgatggtcc cccctatgcc
     1381 aacggcgaga tccatatcgg ccatgcggtg aacaaggtac tcaa
//
LOCUS       DASQSL010002095         1291 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_109826, whole genome shotgun sequence.
ACCESSION   DASQSL010002095 DASQSL010000000
VERSION     DASQSL010002095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1291
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109826"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1025)
                     /locus_tag="VE844_21075"
     CDS             complement(<1..1025)
                     /locus_tag="VE844_21075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011614981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HZC03739.1"
                     /translation="MPTNVTAEYKKAEQAFRQARDLDERLACLKEMLRTIPKHKGTEH
                     LQAGLKTRIKQLTDELTGPKKGGSHAAALYAVRSEGAAQVCLIGPPNAGKSSLHARLT
                     GSHTEVRPYPYTTKLPVPGMLPFEDVYFQMVDLPPISTEYMEPWFGNAIERADAALLV
                     VDLSDPGCVDQVIAIRARLAEKKIMLSEHWPGLATQRELTAIPLSVAQKDHEEESSDP
                     FLIYLPTLLMANKSDLDPDPDEVKVLEELLEVHFPAVATSAETGQGIELLGAMLFRGL
                     EIVRVYTKAPGRPADKDRPFTVRRGATVLDVARLVHKDIARTLKFARLWGSGQFDGQH
                     VGPDHQVA"
BASE COUNT          258 a          371 c          366 g          296 t
ORIGIN      
        1 gccacttggt gatcgggtcc cacgtgttgg ccgtcgaact gaccgctacc ccataggcgc
       61 gcaaacttaa gggtccgagc gatatcctta tgtactagcc gggccacatc aagcaccgtc
      121 gctccacggc gcacggtgaa agggcgatcc ttatcggccg gccgtcccgg cgctttggtg
      181 tagacacgaa cgatttcaag cccccgaaag agcatcgcgc caagcagttc aattccctgc
      241 cccgtctcgg cggatgtcgc caccgccgga aagtgaacct cgagcaactc ttccagtacc
      301 ttcacctcgt cgggatcggg gtcgagatcg ctcttattgg ccatcagtaa ggtgggcagg
      361 tagatcagga acggatcgga actctcctct tcgtggtctt tctgagcgac gcttaggggt
      421 atcgctgtta attcccgttg cgtggccaga ccgggccaat gctctgacaa catgatcttc
      481 ttctcggcga gccgcgcgcg gatggcgatt acctgatcca cacacccggg atcgctcaaa
      541 tccacgacta gaagggcggc atctgcgcgc tcgattgcgt taccaaacca cggttccata
      601 tactcggtgg aaatgggcgg caaatcaacc atctggaaat acacgtcctc aaacggtagc
      661 atgcctggaa ctggcagctt ggtcgtatac ggatagggtc taacctccgt gtgggatccg
      721 gttaaccgcg catggagact ggacttcccc gcgttgggcg ggccaatcag gcacacttgc
      781 gcggcccctt cggaccgaac ggcgtaaagc gcggcggcgt ggctcccgcc cttcttgggg
      841 ccagtgagct cgtcggtcag ctgcttgata cgcgttttga ggcccgcttg gagatgctcc
      901 gtccccttgt gcttggggat cgtgcgcaac atctctttca ggcacgccag gcgctcgtcg
      961 aggtcacggg cctgtctgaa cgcttgctcg gcctttttgt actcggcggt aacgttggta
     1021 ggcatagttc tcgacagaac tgttttttga gttctgttac tcgacgccgg atacagaaga
     1081 cctagccccc atgaggaaag tccaagtaat cattgtatga agggcgtcgg ccgtgactac
     1141 ccggccggtt atcgataagg gctccaaccg acttggtaac gctgggatct cgttagtctt
     1201 ggtgtagctt ggcactgcgc gctggcaaaa atatttatga taaaattaag gggtaatttt
     1261 atcattctta ccttatcccc ggcagcttat a
//
LOCUS       DASQSL010002096         3772 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_174976, whole genome shotgun sequence.
ACCESSION   DASQSL010002096 DASQSL010000000
VERSION     DASQSL010002096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3772)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3772
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174976"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            99..1157
                     /locus_tag="VE844_21080"
     CDS             99..1157
                     /locus_tag="VE844_21080"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011633523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004659 - prenyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phytoene/squalene synthase family protein"
                     /protein_id="HZC03740.1"
                     /translation="MAQPTAQDHAYQRHILQGVSRTFALTIPMLPPRLCEVVGNAYLL
                     CRIADTIEDGTELTPPQQRHFAEQFIWVVEGAVAAETFAAELYPLLSRHTLEAECDLI
                     QNTPRVIRITHSFNATQQQALTRCIRIMANGMAHYQAQESLSGLPDLPAMAEYCYYVA
                     GVVGEMLTEIFCDYSEEINRNKKALMELAVSFGQGLQMTNILKDIWEDRMRGACWLPR
                     DLFLKEGIELKDLQPGTPHPGFSAGLGQLIGLAKHHLYNALTYTLLIPAQERGIRRFC
                     LWALGMAALTLKKLNKQRNFTHGKQVKISRQSVKATLLVTTALINYNSLLKLLLYLTS
                     RDLPDNTIHEKINMLRVS"
     gene            1273..3222
                     /gene="shc"
                     /locus_tag="VE844_21085"
     CDS             1273..3222
                     /gene="shc"
                     /locus_tag="VE844_21085"
                     /EC_number="5.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013032352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051007 - squalene-hopene cyclase activity
                     [Evidence IEA];
                     GO_process: GO:0019746 - hopanoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene--hopene cyclase"
                     /protein_id="HZC03741.1"
                     /translation="MLMPSRPTREKKKIIQPKESVPKQRATNLEAAIARARAALQQDQ
                     QADGHWVYTLEADCTIPAEYILMMHFMDEVDRDLERKIAVYLRKQQASHGGWPLYAGG
                     EIDLSGSVKVYYALKLAGDDPAAPHMVKARKAILAHGGAARANVFTRITLALFGQLPW
                     RAAPFIPVEIMLLPRWFPFHLSKISYWSRTVMVPLLILCSLKPKAANPRRIDIRELFI
                     TSPAEEKHYFRPTTRLSRLFLGLDRIGRMLEPLIPRSLRCIAIHQAEQWFTARLNGTD
                     GLGGIFPAMVNAYEALALLGYPKDHPYRRQAQAALRKLLVIEDQVAYCQPCVSPMWDT
                     AIACHALYEAAGRQASPEVVEGLDWLKARQLRDEPGDWRDHHPALAGGGWPFQYANPN
                     YPDLDDTSMVGWAMCLTDPERYSEAIQMSAEWIWNMRSKNGGFASFDADNTHYYLNNI
                     PFADHGALLDPPTEDVTARCLVLLILASDPKYQAAITRAIRFLKDTQEAEGSWFGRWG
                     TNYIYGTWSVLSALEVAGEDPAQPYIRRAVEWLKETQHIDGGWGESNDSYFPAKRHQP
                     HPSTSFQTAWALLALMAAGELRSEAVRRGIQYLLQHQQADGLWHDPSYTAPGFPRVFY
                     LKYHGYTRYFPLWALAQYRNRTARD"
     gene            3226..>3772
                     /locus_tag="VE844_21090"
     CDS             3226..>3772
                     /locus_tag="VE844_21090"
                     /inference="COORDINATES: protein motif:HMM:NF013232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine phosphorylase"
                     /protein_id="HZC03742.1"
                     /translation="MLGIVAALPAEARSLTGQRVPSGQAIRLGGATLLYVSGMGQARA
                     RSAADQLLRQGAQALVSWGTAGALERTLTAGTLILPTTVTDLTRTFYVDPASHRRIRG
                     TLKDRLPVRTGTLIQSTKIVTRPEQKAELFTRTGAVAVDMESAAIGEVAAQAGVPFLV
                     VRGIADCQSTPIPRCAVQAIDE"
BASE COUNT          827 a         1096 c         1070 g          779 t
ORIGIN      
        1 gctgcaatcc ggcgactacc ttcgggaggc gcaggtgtcg cacgttcaaa tcgtgtcacc
       61 ccgaccagat tatgccgatc atgccagaca aataacgcat ggcacaaccc actgcccaag
      121 atcacgctta tcaacgccat atacttcaag gcgtctcccg cacgtttgcc ttgaccatcc
      181 caatgcttcc accgagactc tgtgaagtgg tcggcaatgc ctatttgctg tgccgcatcg
      241 ccgatactat tgaagatggg actgaactta cccctcccca gcaacgccat tttgccgagc
      301 aattcatttg ggtggtcgag ggcgctgtgg cggcggagac ctttgccgcc gaactctatc
      361 cgctgctttc gcgccatacg ctggaagccg agtgcgattt aatccaaaac accccgcgtg
      421 ttatccgcat cacccatagt tttaacgcca cccaacagca ggcattaacg cgctgcatcc
      481 ggatcatggc caacggcatg gcccattatc aggctcagga aagtctgagt ggtttgcccg
      541 atctgccggc catggctgaa tactgctatt acgtcgccgg ggtggttgga gagatgttga
      601 ccgagatctt ttgtgattac tccgaggaga tcaaccgtaa taaaaaggcg ctgatggagc
      661 ttgccgtctc gtttggtcaa gggttgcaga tgaccaatat cctcaaggac atctgggaag
      721 accggatgcg gggggcgtgc tggctgcccc gcgatctgtt tttaaaagaa ggtatagaac
      781 ttaaagactt gcaacccggc accccacatc ctggattcag cgccgggctt gggcaattga
      841 tcggcttagc caaacaccac ttgtacaatg ccttgaccta taccttgctc atcccggcgc
      901 aagaacgggg gatccgaagg ttttgtcttt gggccttggg aatggcggca ttgacactca
      961 aaaagctcaa taagcagcgg aactttacgc acggcaagca agtaaagatc tcacggcaga
     1021 gcgtaaaggc caccctctta gtaactactg ctttaataaa ttacaatagc ttattgaagt
     1081 tactgctcta tttgacatca agggatttgc ctgacaacac gattcatgaa aaaatcaata
     1141 tgcttcgggt aagctaggac ccgaacaggc ggggcgtctg tattttcact tcctcgcgcc
     1201 ctaatactaa caagcgcacc cacgcatcgt gggcaagcgt tgggagatcc agaggggtat
     1261 ggagtgtatc cgatgttgat gccatcacgg cctactaggg agaaaaagaa gatcattcag
     1321 ccgaaagagt ctgtccctaa acaaagggcc actaacctcg aggcggccat cgcccgcgct
     1381 cgcgctgcgc tacaacagga tcagcaagcc gatgggcact gggtttacac cctggaggcc
     1441 gattgcacga tcccggctga atacatcctg atgatgcact ttatggatga ggtagatcgc
     1501 gatctcgaaa ggaagatcgc cgtctatctg cgcaaacagc aggctagcca tggaggatgg
     1561 ccgctttatg cgggtggaga gatcgatctc agcggttcgg tgaaggtcta ttatgccttg
     1621 aaactggcgg gcgatgatcc cgcggcccct cacatggtaa aggcgcgcaa ggccattctt
     1681 gcacacggtg gagcggcgcg agccaatgtc ttcacccgca tcaccctggc cctctttggc
     1741 cagcttccct ggcgcgccgc gccctttatt cccgtggaga tcatgcttct accccggtgg
     1801 ttcccgttcc acctgagcaa gatctcctac tggtcgcgca ccgtgatggt gccactcttg
     1861 atcctctgca gcttaaagcc caaagcggcg aatccacgta gaatagacat cagagagctc
     1921 ttcatcacat ctcccgccga ggaaaaacac tatttccggc ccacgacacg cttgagccgt
     1981 ctgtttctcg gcttagacag gatcggacgc atgttggagc cgctcatccc gcggtcgctc
     2041 cgctgcatcg ccatccacca ggccgagcag tggttcacgg cccggctcaa tggaaccgat
     2101 ggtttgggtg ggatcttccc ggcgatggtc aacgcctatg aggcgctggc gctgctcggt
     2161 taccccaaag accaccccta ccgccggcag gcccaagcgg ccctgagaaa actgctcgtg
     2221 atcgaggacc aggttgccta ctgccagccg tgtgtgtcgc ccatgtggga taccgcgatc
     2281 gcgtgccatg cattatatga ggccgcggga cgccaggcat cccctgaggt ggttgagggt
     2341 ctcgattggt tgaaggcgcg gcagctccgt gatgaacccg gagattggcg cgaccatcac
     2401 ccggctttag ccgggggcgg ctggcccttt cagtacgcca atcccaatta tcccgatctg
     2461 gatgatacct cgatggtcgg gtgggcgatg tgtctcaccg atccagagcg ctatagcgaa
     2521 gcgattcaga tgtcagccga gtggatctgg aacatgcgct cgaaaaacgg cggatttgcc
     2581 tcctttgacg ccgataatac ccattattat ctcaataata tcccctttgc cgatcatggg
     2641 gctttgttgg atccccccac agaggatgtc acagcccgct gcctcgtgct cttaatactg
     2701 gcatccgatc cgaaatacca ggcggcaata acccgggcga tccggttcct gaaggacacc
     2761 caggaggccg agggttcctg gttcggacgc tggggaacca actatatcta tgggacctgg
     2821 tcggtattga gcgcactcga ggtcgcgggc gaggatcccg ctcaacccta catacgccgg
     2881 gcggtagaat ggctgaaaga gacccagcat atcgatggcg gctggggtga aagcaacgat
     2941 agttacttcc cggccaagcg ccatcagccc catccgagca cctcattcca gaccgcctgg
     3001 gccttactcg ccctcatggc ggcgggtgag ctgcgatcgg aagccgtgcg ccgggggatc
     3061 cagtatctcc tgcagcacca acaagccgat gggttgtggc acgatccgag ttatacggcg
     3121 cccggttttc cgcgggtgtt ttatctcaaa tatcatggct ataccagata cttccccttg
     3181 tgggcgctgg cccaataccg aaaccgtaca gccagggatt aaagcgtgtt gggaatagtg
     3241 gccgccttac cggcggaagc gcggagtctc accggacagc gggtgccatc ggggcaagct
     3301 atccggctag gaggcgctac gctgctctat gtctccggga tgggtcaagc gcgcgcccgc
     3361 agtgcggccg atcagctgct gaggcagggc gcccaagcgc tggtgagctg gggcaccgcc
     3421 ggcgcgctgg aacggacact caccgcaggg accctgatcc tgccaaccac ggtaacggat
     3481 ctcacccgga cgttttacgt agaccctgcc tcgcaccggc gcatccgagg cactctgaag
     3541 gatcggctgc cggtacggac ggggaccctg atccaaagta cgaagatagt gaccaggccc
     3601 gagcaaaaag cggaactgtt tacgcggacg ggggctgtgg ccgtagatat ggaaagtgcg
     3661 gctatcggag aggtagctgc gcaagcgggc gtgccgtttc tggtcgtccg cgggatcgcc
     3721 gattgccaat caacgccaat cccacgctgt gctgtgcaag caatcgatga at
//
LOCUS       DASQSL010002097         1023 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_39861, whole genome shotgun sequence.
ACCESSION   DASQSL010002097 DASQSL010000000
VERSION     DASQSL010002097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39861"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            368..757
                     /locus_tag="VE844_21095"
     CDS             368..757
                     /locus_tag="VE844_21095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009708880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HZC03743.1"
                     /translation="MDRTYKPQGYSSVSPYVVASGAQGVIDFLVKSFDARQTRRYDMP
                     DGSIMHAEVQIDDTVVMIADGGGDNPAFSIWLHVYVPDVVVSYRRALDAGGLPLDEPK
                     QREGDPDRRAGVKDPAGNTWWIATQVS"
BASE COUNT          208 a          308 c          304 g          203 t
ORIGIN      
        1 gctcggtcta catgctgaca tccatccgaa actgcaaaat acccgagttt agattccgcg
       61 ccctgttgag cgaaggcggc ccagctctgt gcttccagcg cacgtgagcg gctcgcgacc
      121 ggaggacaca ataccctctt cagcgttcca attgcaacgc atccctgagc ttcacttctc
      181 cgccacggtg ggccagcagc cggaggtcga gctagcgctg gtctagctgc tgcgcgctcg
      241 tggctatctc acgcagccgc gtgcaagcag tagaggttct ccgaagttcc tcgatgcaga
      301 aggctccgcc acggggatac ttacagttac tgttataggc agtgtcgctt taccgggagg
      361 aagcacgatg gaccgaacat acaagccaca aggatattcg agcgtttcgc catacgtcgt
      421 tgcgagcggt gcgcagggtg tcatcgactt cctggtcaag tcgttcgatg ctaggcagac
      481 ccgccgctac gacatgcccg acggttcgat catgcacgct gaagtgcaga tcgatgacac
      541 agtcgtgatg atcgctgatg gcgggggcga taacccggcc ttttcgatct ggctccacgt
      601 ctacgtgcct gacgtggttg tgtcataccg tcgggccctc gacgccggtg gtctccccct
      661 cgacgagccg aagcagagag aaggcgatcc cgaccgccgc gctggggtga aagaccctgc
      721 tggcaatact tggtggattg ctacccaggt cagctgagtc tagctagcaa gacggtctat
      781 ttactcgagt gcgtggaagg taggtgttct cggaagtctg gcccggcggt gtccagcgaa
      841 gctcgcggag cacgtgtcgg acggaccgcg cagaactcta ccccctattc aacctttcgg
      901 tggatgcccc tccacccgtc ccgcaatact atcgtcaagg caaaccgatg gaaggagaat
      961 cgagatggga aagctgatcg ccaccacgca ggccaccgtc gacggcgtca tagacccggt
     1021 cgg
//
LOCUS       DASQSL010002098         1332 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_202731, whole genome shotgun sequence.
ACCESSION   DASQSL010002098 DASQSL010000000
VERSION     DASQSL010002098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1332
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202731"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1213)
                     /locus_tag="VE844_21100"
     CDS             complement(<1..1213)
                     /locus_tag="VE844_21100"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HZC03744.1"
                     /translation="MPRRFFSVFVIGLFCLAIVGYANAAEPQRGGTLRIAYEADITGM
                     DPHTSLGIQAMYVEQNLYNTLVTIDEHAEYVPDLAESWEVKEDGRVYVFRLRQGVKFH
                     DGTDFNAEAVKWNFDRLLDPKENVITRSYFEPIIESVQVIDEHTLQISLKYPTNTLLP
                     ALAVYRVGFMIISPAAYQKWGRQGFSHHPTGTGPFKLVNWEQNRVIELERNPHYFKQG
                     LPYLDRLEFNIMKDGTTRATAMRAGEVDFVNEVPVEHAARLREDPNIHTYRGMDASKI
                     YSPFNVQRKPFDDVRVRQALAGYGISREAIAKIAFLGFAEPLLGVIPPGTRGHQSILE
                     MYPYNPGKAKQLLEAAGITANNPLEYSIMTHAAYPPLPNVATIMKTQLESLGPVRVKV
                     EVIDRLIFLKRL"
BASE COUNT          258 a          372 c          397 g          305 t
ORIGIN      
        1 ggaggcgttt gagaaagatc agtcggtcga tcacctccac cttgactcgc accggcccca
       61 gggattcgag ctgggtcttc atgatggtgg cgacattggg caaaggcggg taggcggcgt
      121 gggtcatgat gctatattca agcggattgt tggcagtaat cccggccgct tccagcagtt
      181 gcttggcttt ccctgggtta tacggataca tctccaagat actctgatgg ccgcgagtcc
      241 caggagggat gacgccgagc agaggttcgg caaaccctaa aaaggcgatc ttggcgatcg
      301 cctctcggct aatcccatac cccgccaggg cttggcggac gcgcacatcg tcgaagggct
      361 tacgctgcac attgaagggg ctgtaaatct ttgaggcatc catccccctg tacgtgtgaa
      421 tattcgggtc ctcgcgcagt cgtgcggcat gctcgacggg cacctcgttg acgaaatcca
      481 cctctccggc acgcatggcg gttgccctcg tggtgccgtc cttcatgatg ttgaactcca
      541 gccggtccag atatggcagc ccctgcttga agtagtgggg gttgcgctcc agctcaatga
      601 cccgattctg ctcccagttg accagtttaa aggggccagt cccggtgggg tggtgcgaga
      661 acccctgtct cccccatttt tggtaagcgg cgggagagat gatcatgaac cccacccgat
      721 acacggctaa ggcgggcagc agggtgttgg tggggtattt gaggctgatc tgcagcgtgt
      781 gctcgtcgat gacctggacg gattcgatga tgggctcgaa atagctgcgg gtgatgacgt
      841 tttccttggg atcgagcagc cgatcgaagt tccatttcac cgcctccgca ttgaagtcgg
      901 tgccgtcatg gaatttcacg ccctggcgca gacggaagac gtagacccgc ccatcctcct
      961 tgacctccca tgactcggca aggtcaggga cgtactcggc gtgctcgtcg atggtgacga
     1021 gcgtattata gagattttgc tccacataca tggcctggat gcccagggag gtatgggggt
     1081 ccatgccggt gatatcggct tcataggcga tgcgcaatgt ccctccgcgc tgtggctcag
     1141 cggcgttggc gtacccgaca atcgccaagc agaatagacc aatcacgaaa acggagaaaa
     1201 accgtcgagg catcttcgtt cctccttgtt tctgcatccg ttcactcgag cttaccctcc
     1261 tggcggcatt gcatggcatc tacttcttag tcgtcggggc gtgggaaatc cctacaccga
     1321 ctgccatttt tt
//
LOCUS       DASQSL010002099         2109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_95652, whole genome shotgun sequence.
ACCESSION   DASQSL010002099 DASQSL010000000
VERSION     DASQSL010002099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2109
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95652"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..293)
                     /locus_tag="VE844_21105"
     CDS             complement(<1..293)
                     /locus_tag="VE844_21105"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03745.1"
                     /translation="MVAAVCAKLGRLTALILPRAHTEMMARFLGQLAQDFEAYFIRLL
                     VDRAGWHRAKGLQVPENIRLLPQPASSPELNPAEHLWEELREKTLPNMSFLSL"
     gene            complement(443..784)
                     /locus_tag="VE844_21110"
     CDS             complement(443..784)
                     /locus_tag="VE844_21110"
                     /inference="COORDINATES: protein motif:HMM:NF024980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HZC03746.1"
                     /translation="MSNLLTTYRQHGPAGVETPGRGQRQRAYLSLEQEQRLLEEFWEE
                     SRAGHVSTARGIKAALEHEVGHSVAKSTVYRLMKRHPWRKVVPGPHHPRGTAEKQETV
                     KKTSPRRSGRP"
     gene            complement(793..1026)
                     /locus_tag="VE844_21115"
     CDS             complement(793..1026)
                     /locus_tag="VE844_21115"
                     /inference="COORDINATES: protein motif:HMM:NF024752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03747.1"
                     /translation="MSVADQWLNRLFAGGRVVVEHVIAGVKRCRIVKDVLRLTKEGIS
                     DLVMEIACGLHNLRLSCRHPLTAFDLLSLVGSS"
     gene            complement(1023..1745)
                     /locus_tag="VE844_21120"
     CDS             complement(1023..1745)
                     /locus_tag="VE844_21120"
                     /inference="COORDINATES: protein motif:HMM:NF024752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HZC03748.1"
                     /translation="MLAYTSLKDRPREFLAATGLTHEEFARLLPAFAAAYAVLYPLDK
                     TLEGKVRQRQVGGGAKGVLPEMEDKLLFILVYQKTHPLQTMHGLQFGLSQPQAHYWIR
                     HVLPVLQRALADLGLAPEREASRVAKSPLTLEGEAELAIDGSERRRQRPQDAVAQKEH
                     YSGKKKAHTDKNILVVNGRTRKVVYLGPTVAGKTHDKKAADEASLTYPLNATRDKDTG
                     FQGYEPGGVLTRQPKKSPEVRS"
BASE COUNT          429 a          638 c          562 g          480 t
ORIGIN      
        1 tccagggaga gaaaagacat attgggaagc gtcttttcgc gcagttcttc ccagagatgc
       61 tccgcgggat tgagctctgg actggaggca ggttgaggga gcaggcggat attctcaggc
      121 acctgcaagc ccttggcccg atgccagccc gctcgatcca ccagcaggcg gatgaaatag
      181 gcctcaaagt cttgggccag ttgccccaga aaccgggcca tcatctcggt gtgggcccgg
      241 gggaggatca gggccgtcag ccgcccgagc ttggcacaca ccgccgcaac cacctacacg
      301 aactcgcgca cgatctgccg cggcacccgg ggccgaatcg gcttcggtgc aaagccacgc
      361 cgaggccggt cactacgtcc aaagcgccct tcatcttcgg ccatgacccg caccgggcgt
      421 tgatcctccg ggtcacgggt ggctagggcc gccccgacct cctgggcgaa gtttttttaa
      481 ccgtctcttg cttctccgcc gtaccccggg ggtgatgagg ccccggtacg accttgcgcc
      541 acggatgacg cttcatcagc cgatataccg tactcttggc caccgaatga cccacctcgt
      601 gctccagcgc cgctttgata ccccgtgccg tgctcacatg ccccgccctg ctctcctccc
      661 agaactcctc cagtaacctc tgctcttgct ccaaactcaa ataggcccgc tgccgctgtc
      721 cacggccggg ggtctccacc cccgccggcc catgttgccg gtaagtggtc agtagattag
      781 acattatcgg gtttaactag agccaaccaa gctcagcaaa tcgaaggcag ttagggggtg
      841 gcggcaactg aggcggaggt tgtgcaagcc gcacgcgatc tccatcacca agtcagagat
      901 accctctttg gtcagacgca agacatcttt gacaatccga cagcgtttga cccccgcgat
      961 cacgtgctcc accaccacgc gcccaccggc gaacagacga ttgagccact gatcggctac
     1021 gctcaactcc tgacctctgg gctttttttt ggctgccgag tcagaacacc tcccggctca
     1081 tagccctgaa aaccggtgtc cttgtcccgg gtggcgttga ggggataggt gaggctcgcc
     1141 tcatcagccg ctttcttgtc atgggtcttg ccggccacgg tcggccccaa atagacaacc
     1201 ttgcgggtac gcccgttgac cactaggatg tttttgtcgg tatgcgcttt tttcttgccg
     1261 ctgtaatgct ccttttgcgc aacggcgtct tggggacgtt ggcggcggcg ctcgctgcca
     1321 tcaatggcca attcggcctc cccttccaga gtcagcggtg atttagccac ccggctcgct
     1381 tcgcgctccg gcgcaagccc cagatcggct aaggcacgct gcaaaacggg cagcacgtga
     1441 cgaatccagt aatgggcctg cggttgactc aacccaaact gcaagccatg catcgtttgc
     1501 aacggatggg tcttctgata gaccagaata aacagcagct tgtcctccat ctccggcaaa
     1561 acacctttgg ctccgccgcc gacttggcgt tggcgcacct taccttccaa ggtcttgtcc
     1621 agcggataga ggaccgcata ggcggcggca aatgcaggca gcaaacgggc aaattcttcg
     1681 tgcgtcagtc cggtcgcagc cagaaactct cggggtctgt cttttaagct tgtataggct
     1741 agcatagggg cactggttcc atttaattcc aatgaggtcc ggtgaattaa tttgacttgt
     1801 ttttttaggg gtgagcagca tagcctactt tacttttaaa gtaggcaaat ctttttatag
     1861 atcgctgcat tagtaggttt accttttata agtctaactg tgcaccagcg aaaaatgatt
     1921 gaaccagatg aaccagatca agtcttctgt gcaatcgcgt gatcgctagg tttaattaag
     1981 aacctatctc taaacctcga ttctcccctt tatgtatgcg ggtctgggga ggtttagaga
     2041 taggttctaa gccaaaatct tccctgtttt atggtcaatg gcatacccta accagcgttg
     2101 ttgcgcttt
//
LOCUS       DASQSL010002100         1397 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_174985, whole genome shotgun sequence.
ACCESSION   DASQSL010002100 DASQSL010000000
VERSION     DASQSL010002100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1397
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174985"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..484)
                     /locus_tag="VE844_21125"
     CDS             complement(<1..484)
                     /locus_tag="VE844_21125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HZC03749.1"
                     /translation="MQNWLLTLPEILVLTMTCGILLAEVFQNPHRPALSYWLAQATLS
                     GALIVTLWLTPSQKQLAFNGVFVHDTMATVLKSFILIVTSAVFVYSRHYLIARDLLKG
                     EYFVLGLFAVLGMMVMASAHSFLTIYLGLELLSLSLYSMVAMHPDSREASEAAMKYFV
                     L"
     gene            complement(506..>1397)
                     /locus_tag="VE844_21130"
     CDS             complement(506..>1397)
                     /locus_tag="VE844_21130"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009147001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HZC03750.1"
                     /translation="LIFIAFLLAFAVKVPMWPVHTWLPDAHVEAPTGGSVILAAILLK
                     MGGYGFLRFSLPIAPDASNTLDGLMIGLSLIAIIYIGFVALVQEDMKKLIAYSSISHM
                     GFVTLGFFIAFRIFENTGSMQGAAMGLEGGMVQMISHGFISGALFLCVGVMYDRLHSR
                     QIKDYGGVVNTMPVFAALMMLFAMANAGLPGTSGFVGEFLVILSSFKASFWFAFCAGT
                     ILVLGAAYTLWMYKRVIFGDIANAQVALLHDLNRRERVVLGMVAAMVVLFGIWPAPLL
                     EVMHPTVTHLLDQIAHSKLP"
BASE COUNT          374 a          383 c          408 g          232 t
ORIGIN      
        1 ccagcacaaa atacttcatg gcggcctcgg acgcctcgcg tgaatcaggg tgcatggcca
       61 ccatcgagta aagtgagagc gagagcaatt ccaggccgag atagatggtc aaaaaactat
      121 gggctgaggc catgaccatc atgccgagga ccgcaaagag ccccaagaca aaatactcgc
      181 ccttgagcag atcacgggca atgagataat ggcgggaata gacaaagacg gcagaggtca
      241 cgataaggat aaagcttttc agcaccgtgg ccatggtgtc gtgaacaaag acgccattga
      301 aggcgagttg cttttgagaa ggtgtaagcc agagcgtcac tatcagcgca ccgctgaggg
      361 tcgcttgcgc gagccagtag ctgagcgccg gccggtgtgg gttttgaaag acctcggcca
      421 ggagtatccc gcaggtcatg gtcaatacca ggatctcggg gagtgtcagc agccaattct
      481 gcatactgga ccttgacgag gcggctcagg gcaattttga atgggcgatc tgatcgagga
      541 gatgggtaac ggtcgggtgc atcacctcga gcaagggcgc aggccagatc ccgaacaaca
      601 cgaccatggc agccaccatc ccgagaacca cccgctcgcg ccggttaaga tcatgcagta
      661 gtgcgacctg ggcattggcg atatcgccga agatgacgcg cttgtacatc cataaggtat
      721 aggctgcccc cagcaccaag atggtgccgg cgcaaaaggc gaaccagaag ctcgccttga
      781 agctgctgag aatcactaag aattccccga caaaaccgga ggtgccgggc aggcccgcat
      841 tggccatggc aaagagcatc atcagtgcgg caaagaccgg catggtattg actacacccc
      901 catagtcctt gatttggcgg ctatgcagcc ggtcatacat cactcccaca cagaggaaca
      961 gggccccgga gatgaagcca tgggagatca tctgcaccat gcctccttcg agccccatcg
     1021 ccgcaccctg catggatccc gtgttctcga agatccgaaa agcgatgaaa aaacccaagg
     1081 tgacaaaccc catgtgcgag atcgaagagt aggcgatgag ctttttcatg tcctcttgga
     1141 ccagggccac aaaaccgatg tagatgatgg cgatgagcga gagcccgatc atgagcccat
     1201 cgagcgtatt actggcatcg ggtgcgatcg gcagactgaa acgcaaaaac ccatagccgc
     1261 ccatcttgag cagaatcgcc gcgaggatca ccgacccccc cgtgggggcc tccacatggg
     1321 cgtcggggag ccaggtatgg accggccaca tcggcacctt gacagcaaag gccaagagaa
     1381 aggcgataaa gattaag
//
LOCUS       DASQSL010002101         1888 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_95726, whole genome shotgun sequence.
ACCESSION   DASQSL010002101 DASQSL010000000
VERSION     DASQSL010002101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1888)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1888)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1888
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95726"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            299..1334
                     /locus_tag="VE844_21135"
                     /pseudo
     CDS             299..1334
                     /locus_tag="VE844_21135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020505914.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
     gene            1366..>1888
                     /locus_tag="VE844_21140"
     CDS             1366..>1888
                     /locus_tag="VE844_21140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003073814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HZC03751.1"
                     /translation="MEREQAIQYMRDLLKLMVEKKGSDLFITVDFPPAIKLDGKVTPV
                     SKTKLMPDHTKALTYAIMNDRQLKEFEATKECNFAIAPTGIGRFRCNALVRMGYVGMV
                     LRLIETQVPTIDQLGLSHVLKEIAMTKRGLVIMVGGTGSGKSTSLAAMINHRNENSFG
                     HILTVEDPIEFVHP"
BASE COUNT          449 a          508 c          517 g          414 t
ORIGIN      
        1 acgcgccaca gcaaggatcg cggcgggggt gcgggtttta ctcaccgcaa gcagcgccac
       61 cgagtccctg gaccggttaa aacgggtctc tgcagccgca atgcgctgtc ttacagcagt
      121 aagagaaggg gtttgaatat ccatttagcc actcggcagc ttgtcttata ggatttttaa
      181 catacctcag ggatacttta aaggcttatc cgttttggcc gataaaaacc ttaacgtgcc
      241 tggtatgtat cgcttcaggc ggctgtggaa cccttataaa aacctttggg aacttgagat
      301 ggatatcggt gaactgcttg cgtttggggt aaagaacggt tgctcggacc tgcacctctc
      361 cgccggtctt ccccccatga tccgggtcga cggcgatatg cgacggatca atataccgcc
      421 tatggaacac aaggaggttc atggtctgat gtacgacatc atgaacgaca aacagcgtaa
      481 gggttacgag gaattcctcg aatgcgactt ctcctttgag atcccgggac tcgcccggtt
      541 tcgcgtcaac gccttcaatc ataaccgcgg gggcaggtgg cgtgtttcgg acgattcctt
      601 cgactatttt gacgctggaa gatctaaaag cacccaagat ctttaaggag atcgcagatt
      661 acccccgtgg gatcgtattg gtgacggggc cgacgggttc gggtaagtct actaccttag
      721 cggccatgat caattacatc aacgagaccg aatacggcca tatcctgacc gtcgaagatc
      781 ccatcgagtt tgtccatacc agtaaaaagt gccttatcaa tcagcgcgag gtgcatcgcg
      841 atacgctcgg tttcaatgag gccttgcgct cagccttgcg cgaagatccc gacgtgatcc
      901 tggtcggcga gatgcgggat ctcgagacca tccgcctggc gctttcagcg gcggaaaccg
      961 gtcatctggt atttggcacg ctgcatacaa gttctgccgc caagaccatc gaccgtatcg
     1021 tcgatgtctt cccggccgcg gaaaaagaga tgatccgggc tatgctttca gagtccctgc
     1081 gggcggtgat cgctcagacc ctgcttaaga agatcggcgg cgggcgggtc gcggcccacg
     1141 agatcatgct cggcacactg gcgatccgca atctcatccg tgagaacaag atagcccaaa
     1201 tgtactccgc gatccagacc ggcggacagc atggaatgca gacgctcgac caaaatctcc
     1261 aggaactggt caggaaaaat atcgtcaatc ggcaggaggc gcgggcgttg gcagctaaca
     1321 aggatcagtt ctaaaccacc caccctttag ccggagaaac ctataatgga acgcgagcaa
     1381 gcgattcaat acatgcggga cctgttaaaa ctcatggtag agaagaaggg gtccgatctc
     1441 tttatcaccg ttgatttccc ccccgccatc aagctcgatg ggaaggtgac acctgtctcc
     1501 aagaccaagc tgatgcccga tcataccaag gctttgacct acgccatcat gaatgatcgg
     1561 cagttaaagg agttcgaggc caccaaggaa tgcaattttg cgattgcgcc cacgggtatc
     1621 ggtcgtttcc gctgcaatgc tctggtgcgt atggggtacg tgggcatggt attgcgcctg
     1681 atcgaaaccc aggtgcccac catcgaccag ctcggcctat cccacgtctt gaaagagatc
     1741 gcgatgacca agcggggctt agtgatcatg gtgggtggga ccggctcagg taagtcgact
     1801 tcgctcgcgg ccatgatcaa tcatcgtaac gaaaatagct tcgggcatat cctgacggta
     1861 gaggatccca tcgagtttgt tcatcccc
//
LOCUS       DASQSL010002102         1483 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_175045, whole genome shotgun sequence.
ACCESSION   DASQSL010002102 DASQSL010000000
VERSION     DASQSL010002102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1483
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175045"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..370)
                     /locus_tag="VE844_21145"
     rRNA            complement(<1..370)
                     /locus_tag="VE844_21145"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            complement(510..>1483)
                     /locus_tag="VE844_21150"
     rRNA            complement(510..>1483)
                     /locus_tag="VE844_21150"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          315 a          474 c          347 g          347 t
ORIGIN      
        1 ctatacatac cacatcacct cggcgcttct gtcacagcgc ccaatgacgc cccacaacac
       61 catgtaacca acgctgacag gcttccagtt aacacggttt agactcttcc cgtttcgctc
      121 gccgctactt agggaatcgc atttgctttc tcttcctaag ggtactaaga tgtttcagtt
      181 cccctcgttg gccaccatgc tctatgtatt caaacatggt tgctaaggca tgacccctag
      241 caggtttccc cattcggaaa tccccggatc aaagcgcgct taccgctccc cgaggcttat
      301 cgcagttagc cacgtccttc atcgcctccg cgtaccaagg catccaccat atgctcttaa
      361 atacttgacc tcattaagaa cttcgtaggt ctcagcactt tgccattatg tcaaagaaca
      421 aacttgaaag tctaagatag atatgcctgc gggaaggaat gggttagctg gatgctcaag
      481 cccatgagct gaacatcaac aacctttaga aaggaggtga tccagccgca ggttccccta
      541 cggctacctt gttacgactt caccccaatc accccgcata ccttcggcac ctgcctccct
      601 tacgggttag ctcagtgact tctggtacac gcagctttcg tggtgtgacg ggcggtgtgt
      661 acaaggcccg ggaacgtatt caccggagcg ttctgatctc cgattactag cgattccagc
      721 ttcaagtcgg cgagttgcag ccgaccatcc gaactaaggc caggtttttg ggattagcta
      781 ctccttgcga agtcgcagcc ctttgtcctg accattgtag cacgtgtgta gccctggaca
      841 taaaggccat gaggacttga cgtcatcccc accttcctcc ccgttcaccg gggcagtccc
      901 ctcagagtgc ccggcatgac ccggtagcaa caaagggcaa gggttgcgct cgttgcggga
      961 cttaacccaa catctcacga cacgagctga cgacagccat gcagcacctg tgcacaggct
     1021 ccgaagagag agtaactttc gctacttgtc ctatgcatgt caaacccagg taaggttctt
     1081 cgcgttgcgt cgaattaaac cacatgctcc accgcttgtg cgggcccccg tcaattcgtt
     1141 tgagtttcag ccttgcgacc gtactcccca ggcggggtgc ttaacgtgtt aactaaggca
     1201 ccgcaggggt cgatacccgc gacaccgagc acccatcgtt tacagcgtgg actaccaggg
     1261 tatctaatcc tgtttgctcc ccacgctgtc gcgcctcagt gtcaggactg gtccagctgg
     1321 ccgccttcgc cacgagtgtt ctcccccatc tctacgcatt tcaccgctac accgagaatt
     1381 ccggtggccc cttccgcact ccagcccgcc agtatcgctt ggccgctccg ggttaagccc
     1441 ggagatttca caagcgactc ggcgggccgc ctacgcgccc ttt
//
LOCUS       DASQSL010002103         1010 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_175047, whole genome shotgun sequence.
ACCESSION   DASQSL010002103 DASQSL010000000
VERSION     DASQSL010002103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175047"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..362
                     /locus_tag="VE844_21155"
     CDS             <1..362
                     /locus_tag="VE844_21155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03752.1"
                     /translation="VRRVCGWLLLPFGQDALSAYILHLFVVALAVRVKPVVLGATHAT
                     PTQNTLFQIAGIAFIWMAIIVRPTVLKWLRIWLEKATALLAAGRAYLDIPGASQQRDM
                     IREARRAQHLTPRGSQG"
     gene            complement(671..>1010)
                     /locus_tag="VE844_21160"
     CDS             complement(671..>1010)
                     /locus_tag="VE844_21160"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HZC03753.1"
                     /translation="ATVEDLAKFAIAVQTGVLITKATLEQMFIRQKTRGGQDVPFGLG
                     WVIEVRNGQKEVWHLGGGQGVSNILYMQPDHGLAVVLLMNVNGLATPLTAAPILDLAR
                     RIAAIASPSP"
BASE COUNT          202 a          294 c          281 g          233 t
ORIGIN      
        1 ccgtccgtcg cgtgtgcgga tggcttcttc tcccctttgg tcaggacgcg ctgagcgcct
       61 atatcctgca tctcttcgtg gtggctctgg cggtgagggt gaaacccgtc gtcctcgggg
      121 caactcatgc cacacccaca cagaacacct tgttccagat cgccggcatt gcctttatct
      181 ggatggccat catcgtgcga ccgactgtgt tgaagtggct acgcatctgg cttgagaaag
      241 ccacagcgtt attggcggct ggacgtgcct accttgacat ccctggggcg tcccagcaga
      301 gagatatgat cagagaagcc cgacgtgctc agcatctcac cccaaggggc tcacaggggt
      361 aggtatgtca tcccctctcc cttcgggggc tttgcacaat aagtcggttt tggactaaaa
      421 tattccgtct tttatactct atattacgca attttgctct aagctctggc ttattgtgca
      481 aagccccctt cgggagaggg atagggtgcg ggaaatctgc cgcacattgg tattgccctc
      541 accctaccct cttccagtgg gagagggaga acgatcagag ggaccggttg tgtccagaag
      601 aatctcttcc catgtcagcc caccaggagg cagggaaaac gcgggtaaga cttagcccgc
      661 gtagagaggg ctaaggtgag ggagacgcga ttgcagcgat ccgccgcgcc aagtcaagga
      721 tcggcgcagc cgttagcggt gttgcgagcc cgttcacatt catcagtaat accaccgcca
      781 gaccgtggtc tggttgcatg tagagaatat tgcttacccc ctgtcccccg cccagatgcc
      841 acacctcttt ctggccgttg cgtacctcga tgacccagcc gagcccgaag ggcacgtctt
      901 gcccgccgcg cgtcttctga cgtatgaaca tctgctctaa cgtggctttg gtgatgagga
      961 cacccgtttg cacagcaatg gcaaatttgg cgaggtcttc caccgttgca
//
LOCUS       DASQSL010002104         1494 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_95754, whole genome shotgun sequence.
ACCESSION   DASQSL010002104 DASQSL010000000
VERSION     DASQSL010002104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1494
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95754"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1093
                     /gene="serS"
                     /locus_tag="VE844_21165"
     CDS             <1..1093
                     /gene="serS"
                     /locus_tag="VE844_21165"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010961216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HZC03754.1"
                     /translation="AKQRGEDVQTLMAEVAYLGDKLRQAEARFNEVQTEIEIFSLMIP
                     NIPHASVPLGRSEADNLEIRRWGTPPHFGFKPKDHVDLGISLGAMDFEAAVRIASARF
                     VILSGPLARLQRALIQFMLDLHTEEHGYTEVYVPFLVNSRSMQGTGQLPKFAQDLFAV
                     PEHNLYLIPTAEVPVTNLAQDQIIPAEQLPLKYVCHTPCFRSEAGSYGKDTRGMIRQH
                     QFEKVELVQLVPPEASYQALEELTRHAEIILQRLGLHYRVVALCTADLGFAAAKTYDI
                     EVWLPGQQRFREISSCSNFESFQARRMKARWRNPATGKPELLHTLNGSGLAVGRTLIA
                     LLENYQDEHGCIHLPAALQPYMGGLTRIG"
     gene            1193..>1494
                     /locus_tag="VE844_21170"
     CDS             1193..>1494
                     /locus_tag="VE844_21170"
                     /inference="COORDINATES: protein motif:HMM:NF017072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit alpha"
                     /protein_id="HZC03755.1"
                     /translation="MKIGVPLESHPGEKRIAIVPEVVGRLQKLGVEVLIEEGAGIGSH
                     YPDPVFQEVGAVLIHGQEQLLGEADLVLRVQPPTVESINLQREGSIAIGFMNPSQNP"
BASE COUNT          309 a          435 c          431 g          319 t
ORIGIN      
        1 ggccaagcag cggggcgagg atgtccagac cttgatggcg gaggtcgctt atcttggaga
       61 taagctgcgg caagccgagg ctcgcttcaa tgaggtgcag acagagatcg agatctttag
      121 cctgatgatc ccgaatatcc cccatgcttc cgtcccctta gggcgcagcg aggcggataa
      181 cctcgagatc cggcgttggg ggacgcctcc gcacttcggc ttcaaaccca aggatcacgt
      241 ggatctcggg attagcttgg gtgctatgga ctttgaggcc gccgtgcgga tcgcgagtgc
      301 gcgttttgtg atcctctcag ggccgcttgc gcggttacag cgcgcactca tccagttcat
      361 gctcgatctc cataccgagg agcatggcta taccgaggtc tatgtgccat ttttggttaa
      421 cagccggagc atgcagggca ccggtcagct gcccaaattc gcgcaagact tgttcgccgt
      481 cccagagcac aatctttacc tgatccccac cgccgaagtg ccggtgacca atctcgccca
      541 ggatcagatc atccccgccg agcaattgcc cctcaaatac gtctgccata ccccgtgttt
      601 ccgcagcgag gcgggatcct acggcaaaga tacccgcggt atgatccgcc agcaccaatt
      661 cgagaaggtg gaactggtcc agttggtgcc tcccgaggcc tcctatcagg ccttagaaga
      721 acttacccgt catgccgaga tcatcctcca gcggctcggc ttgcattacc gggtggtcgc
      781 cttatgtacg gcagatctcg ggttcgctgc cgccaagacc tatgatatcg aggtctggtt
      841 gcccggccag caacgctttc gggagatctc ctcctgcagt aatttcgagt ccttccaggc
      901 gcgccggatg aaggcccgct ggcgcaatcc cgcgaccggc aaaccggagc ttttgcatac
      961 cctcaatggt tccgggcttg cggtcgggcg cacgcttatt gctctcctcg agaactacca
     1021 ggatgagcat ggttgcatcc atctcccagc agcactgcag ccctatatgg gggggctgac
     1081 tcggatcggc tgagatttct ggcgacacgc ttcaatttcc tttaccatta ccaagcttgg
     1141 cattaaatca cctatacaaa aacgacgcta gaaaaaagta gaggaactga ccatgaaaat
     1201 cggcgtgccg ttggaatccc atccagggga gaaacgtatc gctatcgtgc cagaagtcgt
     1261 gggacgattg cagaagcttg gggttgaggt gctgatcgaa gagggcgcgg ggatcgggtc
     1321 ccactacccc gatccggtgt ttcaagaggt gggggcggtt ctgatccatg gccaagagca
     1381 gcttctcggc gaggccgacc ttgtgcttcg ggtacagcct ccgaccgtgg agtctatcaa
     1441 tctccaacgg gagggtagca tcgcgatcgg gtttatgaac ccgtcgcaga atcc
//
LOCUS       DASQSL010002105         2400 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_39963, whole genome shotgun sequence.
ACCESSION   DASQSL010002105 DASQSL010000000
VERSION     DASQSL010002105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2400
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39963"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(172..1890)
                     /locus_tag="VE844_21175"
     CDS             complement(172..1890)
                     /locus_tag="VE844_21175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006422956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03756.1"
                     /translation="MRDARFFTYPVHDWQRRYEALRASFVERLPAAIVAERFGYTSAY
                     VRLLRHQFRHGQLDFSEPVPEGKAARRRVRSHGRQKIIAWRPQRLSAGEIAELLSEEG
                     VEISIRTVERVLAEEGFPKLPRRTRMKLGHTVKGAQIPEASESVTLGELDGCRWGSAA
                     AGVFLFAPFLSQLNIREVVRQASLPGTKVIPAASYFLSFLALKLLGTERYVHVGDQAF
                     DPGLGLFAGLNTLPKCTALSTYAYSLDEVHLLRLQQAFVKHTYKFGLYEGYFVNLDFH
                     TGPHFGEESVLEKHWSGTRGRAMKGALTLFAQDAESKLILYTAADIKPQEANDQVLEF
                     LSFWKGVERGVTPTLVFDSRFTTYPHLSALNTQGVRFITLRRRGQRLLREVDKLTPWQ
                     RITIPHAKRKYPNPLVHEAMSTLRGYQAPLRQVVVRGSGHEKPTFLITNDVEMPLALL
                     VGHYARRWRVENGIAEAVKFFHLNALSSPILVKVHFDIAMTMIADTLYSLLARKLRGF
                     EHCDAPKLYRHFIRTNGVVDIRNTEITVTFPRRAHNPILRAVPWHRLPSTLPALEDAH
                     LTFQFQ"
BASE COUNT          526 a          620 c          729 g          525 t
ORIGIN      
        1 tcacgacatc tcccaccaat ttcacagcgt taacgatttc agccgccggg cgcggcgtat
       61 ctttctttaa ggccatagta atactcctct ctttcctatc aaactcattc agcaccgatt
      121 ttcgcgcgag tttaaccgtc acccgaatat aacatgggag ggggtggtgt atcattggaa
      181 ctggaatgtg agatgggcgt cttcgagagc cgggagggtt gaggggaggc ggtgccaagg
      241 gactgcacgg aggatggggt tgtgggcgcg tcgggggaag gtgacggtga tctcggtgtt
      301 gcggatgtct acaacgccat ttgttcggat gaagtggcga tagagcttgg gcgcgtcgca
      361 gtgctcaaag ccccgcagtt ttctcgctag caagctgtag agggtgtcag cgatcatcgt
      421 catggcgatg tcgaaatgca ctttgaccag gatgggtgaa gagagggcgt ttaagtggaa
      481 gaacttcacc gcttcggcaa tgccgttttc cacacgccac ctccgagcat aatggccgac
      541 cagtaacgcc agtggcatct cgacatcgtt ggtgatgagg aaggtaggct tttcgtggcc
      601 gctcccccga accaccactt ggcggagggg agcttggtaa ccccggaggg tactcatggc
      661 ctcatggacg agagggttgg ggtacttgcg tttggcgtgg ggaatggtga tccgctgcca
      721 aggggtgagc ttatcgacct ctctgagcag gcgttgtccg cgacgccgca gagtaatgaa
      781 gcgcacgccc tgggtattga gagcggagag gtgggggtag gtggtgaaac gggaatcgaa
      841 caccaaagtg ggtgtcacac ccctctctac gcctttccag aaagagagaa actccagcac
      901 ttggtcgttg gcctcctgag gttttatgtc ggcggccgta tagaggatga gcttggattc
      961 ggcgtcttgg gcaaagagtg tgagtgcgcc tttcatggcc ctgccccggg tgccactcca
     1021 gtgtttctcc aacacagact cctcaccgaa atggggcccc gtatggaagt cgagattaac
     1081 gaagtagccc tcatagaggc cgaacttata ggtgtgcttg acaaaggcct gctgaaggcg
     1141 caagaggtgg acctcatcca gcgagtaggc atacgtggac agggcagtac atttgggcag
     1201 agtattgaga cctgcaaaaa gcccgagccc ggggtcaaaa gcctggtcgc cgacatggac
     1261 gtagcgctcg gtgccgagga gcttcaaggc caggaacgaa aggaaataac tggccgccgg
     1321 tatcaccttc gttccaggca agctggcctg acgcaccacc tcccggatat tgagttggct
     1381 caagaagggc gcgaaaagaa atacgcctgc cgccgccgat ccccagcggc agccgtcgag
     1441 ttctcccagg gttaccgatt ctgaagcctc ggggatttgg gcgcctttga ccgtgtgccc
     1501 caacttcatg cgggtgcgcc ggggtaattt tggaaaaccc tcttccgcga gcactcgctc
     1561 gaccgtgcgg atggagatct ccaccccctc ctcactcaat agctcggcga tttccccggc
     1621 tgacaggcgt tgtggtcgcc acgcgatgat cttttggcgc ccgtgggagc ggacgcggcg
     1681 tcgagcggcc ttcccctctg ggaccggctc cgagaaatcg agttgaccgt gccgaaactg
     1741 atggcggagc aggcgcacat aggcagatgt gtagccgaag cgctcggcca cgatggcggc
     1801 ggggagacgc tcgacaaagg aggcgcgcaa agcctcatag cgccgttgcc agtcgtggac
     1861 cgggtaggta aagaaacgcg cgtctcgcac ggaaccatat tatctattat gacggttata
     1921 ttatcaatac ttcgtgtgtt aaaacatacg atgtccgtga cgacccccct ttccatgcga
     1981 tcgaggactc gtataactgg ctgataagaa gtgatttatg gtggttagcg ccgaccggca
     2041 aggcgcctgg cttccgagct gtcatgtttt atgtatcagc atcatgccat gttaccctca
     2101 tataatataa caataggatg gtcttgcttc atgacacggg caacgccagg ccccagaaat
     2161 cagatactta tcgaagctgc atgtctgaga gtcgcacatt agtgtgcgtg agttacttcg
     2221 cgcgaaaatc cgtgtacact gaaaacgttc tactggcgtc gagtgttccg catcctgcca
     2281 gcagcctttt aggtggatgt tcgtatactg gacttgcctt ctgctttctg aaacaagcat
     2341 tgcggcatac catcgacagc tagaacgaat tatcgacgcc taattttagg tacgggggga
//
LOCUS       DASQSL010002106         1714 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_95806, whole genome shotgun sequence.
ACCESSION   DASQSL010002106 DASQSL010000000
VERSION     DASQSL010002106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1714
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95806"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            222..1364
                     /locus_tag="VE844_21180"
     CDS             222..1364
                     /locus_tag="VE844_21180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011340707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC03757.1"
                     /translation="MTQGTTILGQVLKMIPRSHIESLDNAYGTGRPSRVLSRWSQFGA
                     LVFAQLAGRQSLRDVVNSMAAQSTALAPLCLAPPKRSTLAEANERRPATLYYALFATL
                     YSRCRALAPRHGFRFKNPLFSLDSTTISLCLSLFPWARFRRAKGAVKVHILLEHAGYI
                     PAFAVITEGKRSDITVARELQLPRDSIVAMDRGYIDYQFLFRLTQDGVYFVTRQKVNA
                     KVKVRARFAVDWQRGITSDHNVVLLGQKGTAYPTVLRRVGYRDLETGKHYVFWTNAFH
                     LAAATIAAIYKERWQIELFFKAIKQHLKIKTFLGTSENAVMTQSWVALLTYLMLAFLR
                     FQAGLGISFQQMLRLLQINLFDRRNLVDLCYPQQRNAPGGQQLCVA"
BASE COUNT          355 a          514 c          467 g          378 t
ORIGIN      
        1 tgcatatcgg ctgcgtgggc gggctagacg gctgggtcgc ttgaggtgtc tctacagcta
       61 tcagttctcg cagatgtctc gctttagtaa ggagatcgtc ataggtacat atctccaacc
      121 actgctgtcc ggctaagaag tgagcaacgg ctcgaagagc cttgcctttt ggtagaatga
      181 ggtttgggct aacgcattca acctcaagga ggattcgagc cgtgacccag ggtaccacca
      241 tccttggcca ggtattaaag atgattcccc gatctcacat cgagtcattg gacaacgcgt
      301 acggcactgg acgcccgagc cgggtactca gccgctggag ccagttcggc gcgctcgtct
      361 tcgcccagtt ggctggacgc cagagcttac gggatgtggt caatagcatg gccgcgcagt
      421 ctacagcgct cgcccccctc tgcctggcgc cgcccaagcg ctccacgctc gctgaagcca
      481 acgagcggcg gcccgcgacg ctgtactatg ccctctttgc cacactctat agccgttgcc
      541 gggcactcgc gccgaggcat ggctttcggt tcaaaaaccc gctcttctcc ttggacagca
      601 cgaccatctc cctctgcttg agcctgttcc cttgggctcg ttttcgcaga gccaaagggg
      661 ccgtgaaggt ccacatcctc ctagagcatg cgggctacat cccggccttt gcggtgatca
      721 ccgagggcaa acgaagcgat atcactgttg cccgcgagct gcagctcccc agggacagca
      781 tcgtcgccat ggatcggggg tacatcgact accagttcct cttccgcctg acccaggacg
      841 gcgtgtactt tgtgacccgc cagaaggtca acgccaaggt caaggtgaga gcgcgctttg
      901 cggtggactg gcagcgaggc atcacctcag atcacaacgt cgtcctgctg gggcagaaag
      961 gcaccgccta ccccaccgtg ctgcggcggg tggggtatcg cgacctggaa accggcaaac
     1021 attacgtatt ctggacaaac gctttccatc tagccgcagc cacgattgcg gcgatttaca
     1081 aagaacggtg gcagatcgag ttgttcttca aggccatcaa acagcacctg aagatcaaga
     1141 ccttcttggg cacctcggag aatgccgtga tgacccaaag ctgggtcgcg ctgcttacat
     1201 acctgatgct ggcgttcctg cggttccagg ccggcctagg catctcgttc cagcagatgc
     1261 tgcgcctcct ccagatcaac ctgttcgacc gacgaaacct ggttgactta tgctacccac
     1321 aacagcgcaa cgcccccggc ggtcaacagc tctgtgtcgc gtagtcctag ccggacagca
     1381 gtggttagcc ataactgttt tgttagcaaa tagttccaat ggcctataaa tcggtgtaac
     1441 gcggccggtc ttgctgtcta gaacggtaac atgtctatca gcgtgtgaag ttacatcgag
     1501 caaaagcatt gttttttcag atgtaatcct acctggcgac cgacgatgat ctcgtcgcca
     1561 tctttcttac cgtaaatttt cccctgatta cgcctggaac cccggtttgg gaagggcttc
     1621 aggaagaccg cgtggtgcga gccacgtatg gcatcctgat tctacttcat acgcatactc
     1681 aatggttagc taagcgagtc ggcaaccctt gtgc
//
LOCUS       DASQSL010002107         1363 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_95824, whole genome shotgun sequence.
ACCESSION   DASQSL010002107 DASQSL010000000
VERSION     DASQSL010002107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1363
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95824"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(155..>1363)
                     /gene="ltrA"
                     /locus_tag="VE844_21185"
     CDS             complement(155..>1363)
                     /gene="ltrA"
                     /locus_tag="VE844_21185"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013953498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZC03758.1"
                     /translation="IAKMETLEEAYRIAKRNGGAPGIDSQTFEDIEATGLASFLEEVR
                     EELISGRYKPKPNRLVDIPKDEGKVRTLQIPCIRDRVVQGALKLILEAIFEADFCPSS
                     YGYRPRRSPHHALAEVRRSVLRRMSTVIDVDLARYFDTIRHSVLLDKIAKRVQDPQVL
                     HLVKQILKAGGKIGVPQGGPFSPLAANIYLNEVDWAFDAIRRKTAQGPYEAVNYHRFA
                     DDIVITISGHHTKRGWAERALQRLEEQLAPLGVALNREKTKLVDTLKGEAFGFLGFDL
                     RRVRKRKGEGYYLLMTPKKKARKAIKAKIRDIIRHGGTTPAKTMVAHINAALAGWVNY
                     FRVGNASRAFSEVRDYTEMKVRTLLTRRKRRRKRSIGWRRWSNEYLYDVLGLYWDWTI
                     HPLPSAEQFS"
BASE COUNT          275 a          420 c          355 g          313 t
ORIGIN      
        1 tgccgggtaa aggactggcg cggtaccgag ctcaaggcgc agcccgtctc cagcccctcc
       61 ccatcagaac tgctcgtgag gttttccctc aagcagctca cccggtgagt ttcgttgaaa
      121 gggttatggg tcgtcttggt catggcgagc actttcacga gaactgctcc gcactcggca
      181 ggggatgaat cgtccaatcc caatacaaac cgagtacatc atagagatac tcgttactcc
      241 atcgccgcca gccaatgcta cgtttacgcc gccgcttccg tcgtgtcagt agcgtccgga
      301 ccttcatctc cgtatagtca cgcacttcac taaaggcgcg actggcgttg ccgacccgaa
      361 agtagttgac ccatcctgcc agtgcggcgt tgatatgcgc taccatcgtc tttgcgggag
      421 tcgtgccccc gtgacggatg atatcgcgta tcttagcctt aatggctttc cgagctttct
      481 tcttcggggt catcaggaga taatagccct ctcctttacg cttgcgcaca cggcgcaggt
      541 caaaccccag aaacccaaag gcttcaccct tcagcgtgtc aacgagcttc gtcttctcgc
      601 ggttgagcgc cacaccgagc ggtgcgagct gttcctcgag tcgctgcaaa gctcgttcgg
      661 cccatccacg cttagtgtgg tggccactga tagtgatgac gatatcatcg gcgaaccgat
      721 gatagttcac ggcctcatag ggtccctgtg ccgtcttgcg gcgaatcgcg tcaaaggccc
      781 aatccacctc gttcaagtag atattcgccg ccagcgggct gaacggccca ccttgcggta
      841 caccgatctt cccacccgcc ttgagtattt gcttaaccag atggagaacc tgggggtctt
      901 gtacccgctt ggcaattttg tccagtaaaa ctgaatgccg aatcgtgtca aagtaacggg
      961 ccagatcgac atcaattaca gtggacatcc gccgcagcac actgcgcctg acttccgcca
     1021 acgcatggtg cggagaccgc cggggtcgat acccgtagga actcgggcag aagtccgcct
     1081 cgaagatagc ttcgagaatg agcttcaacg ccccttgcac cacgcggtcg cggatgcaag
     1141 ggatctgaag cgttcgaacc ttgccttcgt cctttgggat atctactagg cggttcggct
     1201 tgggtttgta cctgcctgag ataagctctt ctcgcacttc ctcaagaaag gacgctagcc
     1261 ccgtcgcctc gatgtcctca aacgtctgac tatcgatgcc aggggcaccc ccgtttctct
     1321 tggcgatgcg ataggcctcc tccagggttt ccatcttcgc aat
//
LOCUS       DASQSL010002108         1150 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_202897, whole genome shotgun sequence.
ACCESSION   DASQSL010002108 DASQSL010000000
VERSION     DASQSL010002108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202897"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..963)
                     /locus_tag="VE844_21190"
     CDS             complement(<1..963)
                     /locus_tag="VE844_21190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03759.1"
                     /translation="MSVRGSPPATLRGRWLLIARVAWVVVALLYVGVFISGIPSEFAR
                     LQTPCTNAVSCSLIPHLSVQKVQQLKEVGLSDEFFAAYFVSIEAAFTALSAAIGALIF
                     WRRPEDRMALFVSLMLLTLGGALPIPLFTLDLSPLWTASARAVAFVGGASAILFFYVF
                     PDGHFVPRWSRWLWLASIGVLAPTLLLPYSFLSLLQHPLLNAVLSASIVGALLLAQAY
                     RYKRVSNAAQRQQTKWVVFGTVAALGGYGGFTALDLLLRSALLASLLSNTAFFVLFSL
                     IPISIAVAVLRHRLYDIDLLINRTLVYGALTASVAGIYILAVGGL"
BASE COUNT          288 a          335 c          357 g          170 t
ORIGIN      
        1 caagcccccc accgctagta tgtagatccc ggcgaccgag gcggtaagcg caccgtatac
       61 gagggtgcgg tttatgagga ggtcaatgtc gtagaggcga tggcgcagga cggccacggc
      121 tatagatatc gggataagag agaagagaac gaagaaagcg gtgttgctca ggaggctagc
      181 aagcaacgcg ctccgaagga ggagatcgag cgcggtgaac ccaccgtagc ctcccaaagc
      241 cgccaccgtg ccaaagacca cccacttggt ctgctggcgt tgggcagcat tcgacacccg
      301 cttgtagcgg taggcctgcg ccaatagtag ggctccaacg atgctcgcac ttaacacggc
      361 gttgagtaag ggatgctgca acagactcaa gaacgagtag ggcaagagga gagtgggcgc
      421 caacacccct atcgatgcca gccaaagcca gcgcgaccag cggggcacga agtgcccgtc
      481 ggggaagacg tagaaaaaga ggatcgccga tgcaccgccg acaaaagcca ctgctcttgc
      541 cgatgccgtc cagagggggg aaagatccaa cgtgaacaag gggatgggaa gcgctccccc
      601 aagcgtcaga agcatgagcg agacaaagag tgccatccga tcttctggcc tgcgccagaa
      661 gatgagcgct ccgatcgcag ctgagagtgc cgtgaaggca gcctcaattg agacgaagta
      721 agcggcaaag aactcgtcgg agaggcccac ctccttcagt tgctgcacct tctgcacgct
      781 gaggtgtggg atcaaactgc acgagacggc gttggtgcag ggagtctgga gccttgcgaa
      841 ctcgctcggg atgccggaga tgaagacgcc gacataaagg agtgcaacca caacccacgc
      901 cacgcgggca atgaggagcc agcgcccccg cagggtagcg ggaggcgagc cgcggacact
      961 cacctcatcg actcctctgc tctgttccct tgcctcttct gtcacaacac cactctacag
     1021 cactaccgtc tcccaagcat tacggatgcc gggacaacga tgggcggtga gggaacttcc
     1081 gagaactcta cttgcacgca gttccgtgag caaggcccga gcgcccaacc actagagcag
     1141 cgccagcttg
//
LOCUS       DASQSL010002109         1031 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_40015, whole genome shotgun sequence.
ACCESSION   DASQSL010002109 DASQSL010000000
VERSION     DASQSL010002109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1031
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40015"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1031)
                     /gene="htpG"
                     /locus_tag="VE844_21195"
     CDS             complement(<1..>1031)
                     /gene="htpG"
                     /locus_tag="VE844_21195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017364844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HZC03760.1"
                     /translation="GYRLRSIIHKYSDHIALPIMMPKEGKDATGYERVNTATALWTRP
                     KNEITEEEYNEFYKHVAHDHEPPLARIHSKVEGNLEYILLLFIPARAPFDLWDPTSRR
                     GVKLYVRRVFIMDDAEQIMPRYLRFVRGIVDSNDLPLNISREILQHNKVIDTIRGAAV
                     KKVLGLFEELVEKGEYDKVWKTLGRAIKEGIIEDPANRDRIAKLLRFSSTHTDSETQE
                     VALEDYVKRMKEEQKFIYYVIAESFATAKNSPHLEIFRKKGIEVLLLSDPVDEWMVTH
                     LNRFEGKELKSVSKGELDIGALEDEEEKQQAKEAMGEYQDLIERIKKSLDQRVKEVRV
                     THRLTVSPA"
BASE COUNT          189 a          296 c          279 g          267 t
ORIGIN      
        1 caggctgggg agaccgtcag acggtgggtc acccgcacct ccttgacccg ctgatccagg
       61 ctcttcttga tgcgttcgat gaggtcctgg tattctccca tcgcctcttt ggcctgttgc
      121 ttttcttcct cgtcctcaag cgcaccgata tccagctcgc ccttgcttac cgacttcagc
      181 tccttgccct cgaagcgatt gaggtgcgtg accatccatt cgtcgactgg atcggacagc
      241 agcagtacct cgatgccttt cttgcggaag atctcaagat gggggctatt tttggcggtg
      301 gcaaagctct cggcaataac gtaatagatg aacttctgct cctctttcat ccgttttacg
      361 tagtcctcaa gcgcaacctc ttgggtctca ctgtcggtat gggtgcttga aaaccgcagc
      421 agttttgcga tccggtcgcg attggcaggg tcctcgataa tgccttcctt gatcgcccgg
      481 cccagggtct tccatacctt gtcgtactct cccttttcaa ccaattcttc aaacaggccc
      541 aacacctttt taacggctgc cccccggatg gtatcgatga ccttgttatg ctgtaggatc
      601 tcgcgcgaga tattgagcgg cagatcattg gagtctacga tgccgcgcac gaaacgcaaa
      661 tagcgaggca tgatctgctc ggcatcgtcc atgataaaca cccgccgcac atagagtttc
      721 accccgcggc ggctggtggg gtcccacaga tcgaagggcg cccgggcggg gatgaagagc
      781 agcaggatgt attcgaggtt gccttctacc ttgctgtgga tgcgggcaag gggtggctca
      841 tgatcatggg ccacgtgctt atagaactcg ttgtattcct cctccgtgat ctcgttcttc
      901 ggacgggtcc aaagcgctgt ggctgtgttg acccgctcat agccggtggc gtctttgcct
      961 tccttgggca tcatgatcgg cagggcaatg tggtcggagt acttatggat aatgctccgc
     1021 agacgatacc c
//
LOCUS       DASQSL010002110         1067 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_202915, whole genome shotgun sequence.
ACCESSION   DASQSL010002110 DASQSL010000000
VERSION     DASQSL010002110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202915"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="VE844_21200"
     CDS             <1..180
                     /locus_tag="VE844_21200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03761.1"
                     /translation="VAFGGPKMNQLYVTGALGAYGSGSQGALFRLDLGPVRGRVILPK
                     AQKLLDLAVSISVRL"
     gene            241..753
                     /locus_tag="VE844_21205"
     CDS             241..753
                     /locus_tag="VE844_21205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006635364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HZC03762.1"
                     /translation="MNAINYARAMASYNRWMNIRIYDACSILSDEERKRDVDAFFKSI
                     HGTLNHLLLADRIWMGRFTGRPFGFKSLDQELYSDFAQLRAEREKDDNGIIAWVEPLT
                     EKDLRSELSYTSVVNPQLRKYPFWFAMTHFFNHQTHHRGQVTTLLTQRGIDPGVTDLI
                     WLPEFQTTQQ"
     gene            846..>1067
                     /locus_tag="VE844_21210"
     CDS             846..>1067
                     /locus_tag="VE844_21210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020465992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase dimerization domain-containing
                     protein"
                     /protein_id="HZC03763.1"
                     /translation="MPEQDCTTPDAPDPRVASRHMIMGFRVTQLIYVAAKLGIADHLR
                     LGPQSVDSLAGVSGAHPRALYRLLRALASI"
BASE COUNT          235 a          317 c          285 g          230 t
ORIGIN      
        1 gtggctttcg gcggcccgaa aatgaatcag ctttacgtca ccggcgctct gggcgcgtat
       61 ggcagcggga gccaaggggc cctttttcga ctggatttag ggcctgtacg cgggcgcgtc
      121 attttgccca aagcccagaa gctgcttgac ctggccgtta gcatctcggt gaggctgtag
      181 ttgtagcggc tcgacaaccc tcggcgttgg gcggcagaat gcgggtgaac gatagatgac
      241 atgaatgcga tcaactacgc tcgcgcgatg gccagctata accgctggat gaatatacga
      301 atatacgatg cctgctccat actctctgac gaggagcgaa agcgtgacgt ggacgctttt
      361 ttcaagtcca tccatgggac gctcaatcac ctcctgctcg ctgaccgaat ctggatgggt
      421 cgcttcactg gccgaccatt cgggttcaag tcacttgatc aggagcttta ctcagacttc
      481 gcacaacttc gagcggagcg agagaaagac gataatggca tcatcgcttg ggtcgaaccc
      541 ttaacagaga aggacttgcg cagcgaactc tcctacacaa gcgtggttaa tcctcaactg
      601 agaaaatatc cgttctggtt tgccatgacg cacttcttca accatcaaac tcatcaccga
      661 gggcaggtaa cgactcttct cacccagcgg ggtatcgatc ctggtgtcac ggatttgata
      721 tggcttccag aatttcaaac gacgcagcag tgagtccgtg cctaaggcta ccgcccaatt
      781 gatgttgggc cgcactgaag cgccgccaag cacagctcaa acccctacaa cccgggagaa
      841 cacctatgcc tgaacaagac tgcaccaccc ccgatgcgcc ggaccctaga gtcgcttcgc
      901 gtcacatgat aatgggcttt cgcgtcaccc agctcatcta tgttgccgcg aagctcggca
      961 tcgccgacca tctgcgcctc ggtccgcaga gcgtcgactc cctcgccgga gtctcaggcg
     1021 cacaccctcg ggccttgtac cgcctgttgc gtgccttagc gagtatt
//
LOCUS       DASQSL010002111         1864 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_175148, whole genome shotgun sequence.
ACCESSION   DASQSL010002111 DASQSL010000000
VERSION     DASQSL010002111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1864
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175148"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1864
                     /locus_tag="VE844_21215"
     rRNA            <1..>1864
                     /locus_tag="VE844_21215"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          443 a          462 c          647 g          312 t
ORIGIN      
        1 tccgaaaggg gcgactgcaa gttcctgggc gtagacccga aaccgacgcg atctacccat
       61 ggccaggatg aagctcgagt aacatcgagt ggaggtccga acgcgtaact gttgaaaaag
      121 tttgcgatga gctgtgggta ggggtgaaag gccaatcaag ctcggagata gctggttctc
      181 cccgaaaact attgaggtag tgcctcggag cgtgtgtcgc ggaggtagag cactgaaagg
      241 acgcgggggc ccaccggctt accaactcct atcaaactcc gaatgccgtg gacatggact
      301 ccgggagaca gcacacgcgc gataatgtgc gtgtacgaga gggaaagaac ccagaccgcc
      361 ggctaaggcc ccgaagtacg gtctcagtga gaaaggatgt gggtgtgccc tgacaactgg
      421 gaggttggct tagaagcagc cataccttga aagagtgcgt aatagctcac cagtcaagtg
      481 cgcctgcgcc gataatggtc gggactgaag ccagtcgccg aagccacggg tttgacttta
      541 gggtcaagcg gtaggggagc gttctgctag cggagaagcg gccgtggaaa cgttgccgtg
      601 gagcgggcag aagtgaggat gccggaatga gtacgcgaga aacggggtga gaatccccgt
      661 caccgaaagc ctaagggttc caggggcagg ctcgtccgcc ctgggtcagt cggaccctaa
      721 gccgaggccg aagggcgtag gcgatgggaa gcgggcgaac attcccgcac cagaggatgt
      781 gcgttaccac ccgcaggggg gacgcaggag tgaaagcagg gccgggcgac ggtcgtcccg
      841 gtgcaaggag gtaggcggtc ccgggggata aaagacccgg gtagccgaga tctgatgcca
      901 actggagggt tcgccctttg ggagtccgtc gaagcaggct gccgagaaaa gcctcggcgg
      961 ggagtatgca ttgtgaccgt accgtaaacg gacacacgta ggcgaggcga gaagcctcag
     1021 gtgcgcgagt gaactgtgga gaaggaactc ggcaaaatgt ccccgtaact tcgggagaag
     1081 gggagcccct ggtacttgag tgcccttcgc gggcatgagg ggaagggggc cgcagagaat
     1141 cggcccaagc gactgtttag caaaaacaca ggtgtctgcg aagtcgtgca agacgacgta
     1201 taggcactga cgcctgcccg gtgccggaag gttaagagga ggggtcaccc cgcaaggggg
     1261 aagctctgaa tcgaagcccc ggtaaacggc ggccgtaact ataacggtcc taaggtagcg
     1321 aaattccttg tcgggtaagt tccgacctgc acgaatggcg taacgacttg ggcgctgtct
     1381 cctccacaag ctcggcgaaa ttggagtctc ggtgaggata ccgagtaccc gcgacaggac
     1441 aaaaagaccc cgtgcacctt tactgcatcc tgacattggt cttcggcatg ctctgtgtag
     1501 gataggtggg aggctgtgaa ccgggggcgc tagctctcgg ggagccactg gtgaaatacc
     1561 accctggtga tgttggagat ctaacctggc tgccctgaag cgggcagagg gaccgtgtca
     1621 ggtgggcagt ttgactgggg cggtcgcctc ctaaagagta gcggaggcgc gcaaaggttc
     1681 cctcagcgcg gtcggtaatc gcgctttaga gcgtaaaagc agaagggagc ttgactgcaa
     1741 caccgacagg tggagcaggt gcgaaagcag gccttagtga tccggcggtc ccacatggga
     1801 gggccgtcgc tcatcggata aaaggtactc cggggataac aggcttatca cgcccaagag
     1861 ttca
//
LOCUS       DASQSL010002112         1694 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_121115, whole genome shotgun sequence.
ACCESSION   DASQSL010002112 DASQSL010000000
VERSION     DASQSL010002112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1694
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121115"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..488
                     /gene="msrB"
                     /locus_tag="VE844_21220"
     CDS             <1..488
                     /gene="msrB"
                     /locus_tag="VE844_21220"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017872990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HZC03764.1"
                     /translation="IGYGGFVMAWDSSEFKKPDTQAIKDKLTDDQFYVTQKNGTERPF
                     GNAYWDNKQDGIYVDVVSGEPLFSSLDKYDSGTGWPSFTKPLERGNIVEKEDRSWFAV
                     RTEIRSKHADSHLGHVFDDGPKPTGKRYCMNSAALRFIPKDDLEKEGYREYKKLFESN
                     R"
     gene            complement(503..919)
                     /locus_tag="VE844_21225"
     CDS             complement(503..919)
                     /locus_tag="VE844_21225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018865220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajD family HNH nuclease"
                     /protein_id="HZC03765.1"
                     /translation="MAPNSFGPRRLGRGSLNQNSLDQIVARAHHERDQRMQGYREQAL
                     KLYPWVCTRCGRSFIRENLTELTVHHKDHDHDNNPADGSNWELLCLYCHENEHARHRD
                     FLEAQGIALGGEKQTPPATHQPFAGLKERLKQKKGG"
     gene            1007..>1694
                     /locus_tag="VE844_21230"
     CDS             1007..>1694
                     /locus_tag="VE844_21230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03766.1"
                     /translation="MFLGWILSVTDVFGESASPTALEQHLIEDFNEAPIDGEIWHTHP
                     REPGNSIRFRLDASERQGERGHSLHLSYTFASAKAAEIGFRLKLPALDASAYDHLVFW
                     VKGDKRQGFATSFKVEFKRPEPNVPGLKEKGSFVVTGVIDAWRRVWVPLNFMTGLRQW
                     TELTDLVISFHSRRSAVKQGAYYFDEIVLLKTDRPGPSVWDKVIPIKKENWEAALGGQ
                     AVKSQLQARLV"
BASE COUNT          373 a          443 c          482 g          396 t
ORIGIN      
        1 taatcggtta tggaggtttt gtcatggcct gggatagttc ggagttcaag aaaccagata
       61 cacaagcgat caaggataaa cttaccgatg atcagttcta tgtgacccag aagaatggaa
      121 cggaaaggcc gttcggtaac gcttactggg ataacaaaca ggacggtatc tacgtggatg
      181 tcgtctccgg cgagccgctg ttcagttcct tggacaaata cgactcgggc accggatggc
      241 cgagttttac caagccgctc gagcgaggga atattgtcga gaaagaagac cgctcgtggt
      301 ttgcggtgcg caccgagatc cgcagcaaac acgccgattc gcatctgggc catgtgtttg
      361 acgatggtcc aaagcctact ggcaagcgct actgcatgaa ttcagccgcc ttgagattta
      421 tccccaaaga cgatctggaa aaagagggct accgggaata caagaaattg ttcgaatcga
      481 atcgataaca taatccaagc ggctatcctc cttttttctg cttgagcctt tccttgagac
      541 ccgcaaaagg ttgatgggtc gccggaggtg tttgcttttc cccaccgagc gcaatccctt
      601 gggcctcgag gaagtcccga tggcgcgcat gctcgttctc atgacaatat aggcacagca
      661 gttcccagtt gctgccatcg gccggattgt tgtcatggtc gtggtcttta tgatggacgg
      721 tgagctcggt caggttttcg cggatgaagc tcctgccaca gcgcgtacag acccaaggat
      781 agagcttgag cgcttgctca cggtagccct gcatacgctg gtctcgttcg tggtgcgccc
      841 gggcgacgat ctgatccaag ctgttctgat tcaatgatcc gcgccctagc cggcgcggac
      901 cgaaactatt cggcgccatg ttcggttcct ctctagcgct ttaactgtac tttcattcta
      961 tcgtactgtg caatatagtt taaatatggc cttttgcaga gtcatcgtgt ttctggggtg
     1021 gatcctgtca gtcacagacg tctttggaga aagcgcttcc ccgaccgctc tcgagcaaca
     1081 cctgattgag gacttcaatg aggccccaat cgatggcgag atttggcaca ctcatccgcg
     1141 tgagcctgga aatagcatcc gctttcggct ggacgcctcg gagaggcaag gagagcgcgg
     1201 ccattccctc catctgagct acacctttgc gagcgccaag gcggcagaga tcggtttccg
     1261 ccttaagctc cccgcgctcg acgcctccgc atatgatcat ctcgtgttct gggtcaaggg
     1321 ggataaacgc cagggtttcg cgaccagctt caaggtagaa ttcaagcggc ctgagcccaa
     1381 tgtaccgggc cttaaagaga agggcagctt tgtcgtgacc ggggtgatcg atgcatggcg
     1441 gcgcgtgtgg gtgcctttga actttatgac cggcctgcgg cagtggaccg agctcaccga
     1501 ccttgtgatc tccttccatt cgcgccgatc ggctgtcaaa caaggtgctt attacttcga
     1561 tgagattgtg ctcctcaaaa cggatagacc ggggccgagt gtttgggata aggtgatccc
     1621 gataaagaaa gagaattggg aagcggccct gggcggccag gcggtgaaat ctcagctcca
     1681 agcccggctg gtcg
//
LOCUS       DASQSL010002113         1149 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_121116, whole genome shotgun sequence.
ACCESSION   DASQSL010002113 DASQSL010000000
VERSION     DASQSL010002113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121116"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            67..909
                     /locus_tag="VE844_21235"
     CDS             67..909
                     /locus_tag="VE844_21235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017954395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HZC03767.1"
                     /translation="MNSNRKPVAVVVGATSKWQADGRNTKLVHGRELDDSELPIGVRW
                     GVGGAIAQKFANEGFFVVLTTRNAPNASALGAAIREQGGETMIVELDLVSQDSISEAF
                     AQIRAQAGDPEVLVYNAGYLEGRDLPPEKELLEHIPVEMFDTAQHIASRGPFLVAKEV
                     LPAMRERGHGSFLISNNSSSLRGRKRYTGQSLYYPRVMMRALAQVLTEEYSEYGVHVA
                     NVVIDGTIDSPGTRALSRAQQHPELIINPVKIAEAFYYLHTQDKSCWTHELQLTPYPS
                     KPSY"
BASE COUNT          272 a          320 c          320 g          237 t
ORIGIN      
        1 gtcacccgac aagagggtcc cgataaggta tcttagacta ttcggcatag gaggaacgga
       61 gctgatatga actctaaccg taaaccggta gccgtcgtag tgggagcgac atccaagtgg
      121 caggcagatg gccgcaatac caaactggtc cacggcaggg agctggatga cagcgagcta
      181 cccatcggcg tgcgctgggg cgtaggggga gccatagccc agaaatttgc caacgagggc
      241 ttcttcgtcg tgctgacgac ccgtaatgcc cccaacgcgt ctgcgttggg ggcggcgatc
      301 cgggagcaag gcggcgagac catgattgta gagctagact tggtgtctca agattccatt
      361 tcagaggcct tcgcccagat tcgagcgcaa gctggtgacc cggaagtctt ggtctacaac
      421 gctggctacc tggaggggcg tgaccttcct ccagagaaag aattgcttga gcacattccg
      481 gtggaaatgt ttgacaccgc ccagcacatc gccagccgtg gaccgttctt ggtcgccaag
      541 gaggtattgc ccgccatgcg agagcgcggg catggctctt tcctcatttc caataactcc
      601 tcgtccttgc gcggaagaaa gcgatacacc ggacagtctc tgtactatcc gagagtgatg
      661 atgcgcgcgc tggcacaggt gctgacggag gaatattccg agtacggcgt gcacgtagcc
      721 aacgtcgtaa tagacggtac cattgactct cccggcaccc gagctctgtc gagggcccag
      781 cagcaccctg aattgataat aaatcccgtc aagatcgccg aggccttcta ctacctgcac
      841 acccaagaca aatcttgttg gacccacgag ctccaattaa ctccctatcc gagcaaacca
      901 agctattaag ggcgccaact cagaacagac gcctgctgaa catctcgttc ctttcgcgat
      961 cgtcgcttga ttcgctaagg tgcggtatcc atttgttcaa aggccttgca agaagaagga
     1021 gattaagcag agattgtcct tgcagccctg taatgtggac acaccacctg catgtatcag
     1081 cgggctcttg gcgcgggttg ataagtcagg aggtcattgg aaaccatttc agaccttccg
     1141 actccacca
//
LOCUS       DASQSL010002114         2272 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_202937, whole genome shotgun sequence.
ACCESSION   DASQSL010002114 DASQSL010000000
VERSION     DASQSL010002114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2272)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2272)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2272
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202937"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..220
                     /locus_tag="VE844_21240"
     CDS             <1..220
                     /locus_tag="VE844_21240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006788810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase"
                     /protein_id="HZC03768.1"
                     /translation="EIQLTDGIAKLLKRKTVLSLEFEGKRYDCGSKLGYLEATVEYAL
                     RHHELREDFERYLHSFTAHTSLTQRSAG"
     gene            221..955
                     /gene="pdxJ"
                     /locus_tag="VE844_21245"
     CDS             221..955
                     /gene="pdxJ"
                     /locus_tag="VE844_21245"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008929429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HZC03769.1"
                     /translation="MQELLLGVNIDHVATLRQARGTRYPDPIQAAIEAEQAGADVITL
                     HLREDRRHIQERDVELLARVLQTCMNLEMAVTEEMLAIAERIRPPDCCLVPERREELT
                     TEGGLDIVGQFGLISEACARLKETGGTRVSLFVAADPKQIEAASRSGANSIEIHTGHY
                     ASNPDRDSRDHELRRIRVAVDQGVAAGLQVNAGHGLNYHNVTAIARIPQIRELNIGHA
                     IIARAVFTGLHEAVREMRRLIREARR"
     gene            952..1350
                     /gene="acpS"
                     /locus_tag="VE844_21250"
     CDS             952..1350
                     /gene="acpS"
                     /locus_tag="VE844_21250"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007145683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HZC03770.1"
                     /translation="MIYGVGVDIVEIARIHKGLDRFGLRLVQRILSENEYREFHSMQK
                     LPQWLATRFAAKEAFAKALGTGFRYGVHLRDISVNNDPLGRPWLEYTGQTLELVRRFD
                     IVRSHLSLTDEREYALAFVVLEKMSIPLPK"
     gene            1362..>2272
                     /locus_tag="VE844_21255"
     CDS             1362..>2272
                     /locus_tag="VE844_21255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014706530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HZC03771.1"
                     /translation="MPEPTHHELTRRRTFAIISHPDAGKTTLTEKLLLLAGAIQIAGT
                     VKGRKNARHATSDWMEIEQQRGISVTSSVMQFTYRNRIINLLDTPGHEDFSEDTYRTL
                     TAVDSALMVIDAAKGVEERTIKLMEVCRLRDTPIITFINKLDREGRDPLDLLDEIERV
                     LTIRGAPITWPIGMGQCFRGIYHLRGGTSRLYRSRSEAKASAGEIIHGLDSPGLSRAL
                     GAQLDELREEIALIGEAGHRFDHEAFLAGTLTPMFFGSALNNFGVAELLDAFVEYAPA
                     PRPIKTSSRTILPEEDRFSGFVFKIQA"
BASE COUNT          522 a          626 c          647 g          477 t
ORIGIN      
        1 ggagatccag ctgaccgatg ggatcgctaa gctcttgaaa aggaagacgg tgttatcctt
       61 ggaatttgaa gggaaacgct atgattgcgg ttctaagctc ggttatctcg aggcgaccgt
      121 ggaatatgct ctgcgacacc acgaattgag agaggatttt gagagatatc ttcactcgtt
      181 caccgcgcac acttctctaa cgcaacgttc agccggttaa atgcaggaat tattactcgg
      241 cgtcaatatc gatcacgtgg ctaccttaag gcaggcccgc ggaacccgct atccggatcc
      301 gatacaagcg gctatcgagg ccgagcaagc cggcgccgat gtcatcacgc tgcacctgcg
      361 cgaggatcgc cgccatattc aggagcgcga tgtggagctg ctggctcggg ttctgcagac
      421 atgtatgaat ctggagatgg cggtcaccga ggagatgctg gcgatagccg aacgcatccg
      481 gccccccgac tgttgtctcg tgcccgaacg ccgtgaggag ctcaccaccg aggggggatt
      541 ggatatcgtc gggcaattcg gccttatcag tgaggcttgc gcccgcttga aggagactgg
      601 ggggacccgg gtatcgttat tcgtcgctgc cgatcctaag cagatcgagg cggccagccg
      661 tagcggcgca aattccatcg agatccacac cggccactat gccagcaatc ccgatagaga
      721 cagtcgcgat cacgagttgc gtaggatcag ggtggcggtg gaccaagggg tggcagccgg
      781 gctacaggtc aatgccggcc atgggcttaa ctaccacaat gtcacagcaa tcgccaggat
      841 cccgcagatc cgcgaattaa atatcggtca tgccatcatt gcccgtgcag tctttaccgg
      901 tctccatgaa gcggtgcgag agatgaggcg cttgattagg gaagcgcggc ggtgatctat
      961 ggggtcggcg tcgatatcgt cgaaatagcg cggatccata agggattgga tcgatttgga
     1021 ctacggcttg tccagcggat cttaagtgaa aatgagtacc gggaatttca ttccatgcag
     1081 aaactgcccc agtggctggc cacccgattt gccgccaagg aagccttcgc caaggcgctc
     1141 ggaaccggct tcagatacgg tgttcatctg cgcgacatca gtgttaacaa tgaccccctg
     1201 ggacggccat ggctcgaata taccgggcag accctcgagt tagtgcgaag atttgacatt
     1261 gtaaggagcc atctcagttt aaccgatgaa cgcgagtatg cactggcctt cgtcgtcttg
     1321 gaaaagatga gtatccctct ccctaagtag attaataatc catgccagag cccacacatc
     1381 acgagctcac gcgtaggcgg acctttgcca ttatctctca ccccgatgcc ggtaaaacca
     1441 cgctcacgga gaaactactg ctgcttgccg gcgccattca gatcgccggc accgtcaaag
     1501 gccgaaaaaa cgcacgccac gccacttcag actggatgga gatcgaacag caacggggga
     1561 tctcggtcac ctcctcggtc atgcaattta cttatcgaaa ccgcatcatc aatctgctcg
     1621 atacacccgg acacgaagat ttctcggagg acacctatcg cacgctcacc gcggtcgatt
     1681 cagcactcat ggtcatcgat gccgccaaag gggtagagga acgcacgatt aaattgatgg
     1741 aggtctgtcg gctgcgcgat acaccgatca tcacgtttat caacaaactg gatcgggaag
     1801 ggagagaccc cttggatctc ctggatgaaa tcgaacgcgt attgactatc cgcggtgcgc
     1861 ccattacctg gccgatcggc atgggtcaat gctttcgagg gatctatcat ctgcgtgggg
     1921 gtacatcgag attgtaccga tcacgcagtg aagcaaaggc ctcggcagga gagatcatcc
     1981 atgggctgga tagcccgggg ctcagtcgcg cgcttggcgc ccagctcgac gagttgcgcg
     2041 aggagatcgc gcttattggc gaggcgggcc atcggttcga tcacgaggcc tttcttgccg
     2101 gtacattgac ccccatgttt ttcggctctg cgctcaataa ctttggcgtg gccgagttgc
     2161 tggatgcctt cgttgaatat gcgcctgctc cccgaccgat taagaccagc tctcgcacga
     2221 tcctgcccga agaagaccga ttcagtggct tcgtcttcaa gatccaagcc aa
//
LOCUS       DASQSL010002115         1934 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_121124, whole genome shotgun sequence.
ACCESSION   DASQSL010002115 DASQSL010000000
VERSION     DASQSL010002115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1934
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121124"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1259)
                     /locus_tag="VE844_21260"
     CDS             complement(<1..1259)
                     /locus_tag="VE844_21260"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HZC03772.1"
                     /translation="MNQFLPIQSKRSPPGPQGHWLVGNLPEFGRDLLGFLSRCAREHG
                     TIVKFRLAGWTAYLLNDPEHVDYVLLSHHRRFIKHRFFWRHVTAIFGQGLLTSEGDFW
                     HHQRRLAAPAFHHQRIAAYGQVMVRCAEQRLADWQEGEILDIHHEMMRLTGAIVAQTL
                     FHTEFSADMEEILHAFDLLTKEIASRFRRPFKLPDWVPTPGNHRYRAGVRRLDRLVYR
                     IIQEHRHHPRNPADLLSLLMRARDEEGRGMSDKQLRDEVVTLFLAGYETTAITLSWAW
                     YALSQHRASEARLLTELKQVLQGRSPTVDDLSRLPYTEMIIKESLRLYPPAYVIGRQA
                     LQACAIGGYTIPAGATLFISPWVLQRDPRYFEEPQEFRPERWAAEFETRLPRYVYLPF
                     GGGPRICIGHRFAMMEAMLLLATIAQR"
     gene            1357..1851
                     /locus_tag="VE844_21265"
     CDS             1357..1851
                     /locus_tag="VE844_21265"
                     /inference="COORDINATES: protein motif:HMM:NF012774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HZC03773.1"
                     /translation="MPLSWGVNHFITLFNAEAKPPVQAAVMNGCRVLNVHDGDTLRVR
                     CGLGSDRRSTHKVRLYCIDAPELAQAPWGKSAREHLRRLVGQGFTQIRVKHRDKYRRT
                     VAEVWKGTMNLNLAMVKAGKVAVYRRYCKVGAYQQAEVMAKSRRIGIWAKPGSHQRPW
                     EWRH"
BASE COUNT          448 a          529 c          558 g          399 t
ORIGIN      
        1 aaccgctgcg caatcgtggc caggagaagc atcgcttcca tcattgcaaa ccgatggcca
       61 atgcagatcc gaggaccacc accaaaggga agataaacat acctgggcag gcgtgtttca
      121 aactcagctg cccatcgttc cggcctaaac tcctgcggct cttcaaagta gcggggatcg
      181 cgctgcagca cccagggact gatgaacagg gtggctccgg ctgggatcgt atacccgccg
      241 atggcgcacg cctgtaaagc ttggcgtccg atcacatagg cgggcggata gagccgcaag
      301 ctttctttga tgatcatctc ggtgtaaggc aaccggctca gatcatccac cgtgggggag
      361 cggccctgta gcacctgctt gagctctgtg agcaatctcg cctcgctcgc tctatgctgt
      421 gacagagcat accaggccca tgacaaggtg atcgcggtgg tctcataacc tgccagaaac
      481 aaggtcacta cctcatcccg caactgcttg tcgctcatac cccggccctc ttcatcacgt
      541 gcccgcatga gcagggagag tagatcggct gggttgcggg gatggtgacg gtgttcttga
      601 atgatccgat aaacgagtct atctaaacgc cggacgcccg cccgatatcg gtgattaccc
      661 ggtgtcggaa cccagtccgg aagtttgaaa ggacgccgaa accggcttgc gatctccttg
      721 gtcaggagat caaaggcatg gagtatctcc tccatatccg cactgaactc ggtatgaaac
      781 agagtttggg ctacgatcgc gcccgtgagg cgcatcatct catggtggat atcgaggatc
      841 tcaccctcct gccagtctgc tagcctctgt tcagcacagc gcaccattac ctggccataa
      901 gcagcgatcc gctggtgatg aaaggcagga gcggcgagac ggcgctggtg atgccagaag
      961 tccccttcgc tggtcaggag cccctgacca aagatggctg tgacatggcg ccaaaagaac
     1021 cgatgcttga tgaagcgacg atggtggctc agtagtacat agtcgacatg ctctggatcg
     1081 ttcaagagat aagccgtcca accggcgagc cggaacttca cgatagttcc atgttctcga
     1141 gcacagcggc ttaaaaatcc caagagatcc cggccaaatt ctggtaaatt gccaaccagc
     1201 caatgacctt gagggccagg cggcgatcgc tttgactgta tagggagaaa ctgattcatc
     1261 agttacggaa ttcctccacg tattaacgca tagcgccgag ctttctccaa taccgtgcag
     1321 agatcctggc cactctggct gattgccgct ttgactgtgc ccctatcgtg gggagtcaac
     1381 cattttatca ccctcttcaa tgccgaggcc aaaccgcccg tccaggctgc cgtgatgaat
     1441 ggctgcaggg tgctgaacgt ccatgacggc gacaccttaa gggtgcgctg tggtctggga
     1501 tccgatcggc gaagtacgca caaggtacgg ctctactgca ttgatgcccc ggaacttgcg
     1561 caggctccgt gggggaagtc cgcccgtgag catttgcgcc ggctggtggg acagggtttc
     1621 acgcagatcc gggtcaagca ccgggacaag taccggcgga cggtagcaga ggtatggaag
     1681 ggcactatga acctaaacct ggcgatggtg aaggctggaa aagtggctgt ttaccggcgc
     1741 tattgcaaag tcggagcgta tcaacaggca gaggtaatgg ctaaatcccg taggattggg
     1801 atctgggcta agccgggatc ccatcagcgg ccatgggaat ggcggcatta gctggggtgc
     1861 taccgtaaaa ttctatcttg cgcaaaatgt gactaggccg cataattcgc tactgacaaa
     1921 tagtttcata gtga
//
LOCUS       DASQSL010002116         1537 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_202938, whole genome shotgun sequence.
ACCESSION   DASQSL010002116 DASQSL010000000
VERSION     DASQSL010002116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1537
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202938"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1257
                     /locus_tag="VE844_21270"
     CDS             <1..1257
                     /locus_tag="VE844_21270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002814051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit A"
                     /protein_id="HZC03774.1"
                     /translation="AGVHGGRVVAEGSLEEVLRSPSSITGRCLLNPLRHPLIERRRTV
                     VTDAGEEGKSPVLEIRDAGLHNLKNLRVSLPLGRLVCVTGVSGSGKSTLVREVLHDTL
                     KGLLGEKRMHGSHRPPLKPPSCKDIKGWEAISRVLEVDQTPIGKTPRSCPATYVGFWD
                     AIRRLFAETPEARMRGYGPGRFSFNVHGGRCDACEGQGVKRIEMSFLPDVTVTCETCG
                     GSRFTPETLAVRFKGKTIAEVLAMSVEAAAEFFAAHAPIAHALQLLQGVGLGYLTLGQ
                     PSPTLSGGEAQRVKLVTELAKAKPATEATRSRKDGGRRATRGNHSLYVLDEPTIGLHM
                     ADVEKLIRVLHRLVAAGNTVVIIEHNLDLIAEADWLIDLGPEGGDAGGHIVAEGAPET
                     VARVRRGSHTAKTLASFLRERSRVSS"
BASE COUNT          327 a          405 c          491 g          314 t
ORIGIN      
        1 gctggcgtgc acggcggccg ggtggtggcc gaaggctctc tggaagaggt gctgcgttcg
       61 ccttcttcca tcactggacg gtgtcttttg aatcccttgc gccaccccct gatcgagcgg
      121 cggcgtacgg tcgtgaccga cgcaggggag gagggcaaat ccccggtgct tgagattagg
      181 gatgcgggtc tgcacaatct caagaacctg cgggtcagcc ttcccttggg aaggttggtg
      241 tgcgtgaccg gtgtcagtgg cagcggcaag agcacactgg tgagagaggt gctgcatgac
      301 actctcaagg gtctcctggg ggagaagcgc atgcacgggt cgcaccgccc acctttgaag
      361 ccccctagct gtaaggatat aaagggctgg gaggcgataa gccgcgttct ggaggtggac
      421 cagacgccca tcggtaaaac tccccgctcg tgccctgcaa cctatgtggg gttctgggac
      481 gctatccgcc ggctgtttgc cgagacaccc gaggcccgga tgcggggcta cggtccggga
      541 cggttctcct tcaacgtcca cggcggacgc tgcgatgcgt gcgagggcca gggggtgaag
      601 cgaatcgaga tgagctttct gcccgatgtc accgttacct gtgagacgtg cgggggttcc
      661 cggtttacgc ccgagacgct ggcggtccgt ttcaagggca aaaccattgc tgaagtgctc
      721 gcgatgagcg tggaggcggc ggcggagttt ttcgcggccc atgccccgat tgctcatgcc
      781 ctgcagcttc tgcaaggggt agggctcggg tatctcacgt tgggtcagcc aagccccaca
      841 ctcagtggcg gggaagcgca gcgggtaaag ctcgtgaccg agcttgcgaa ggccaaaccg
      901 gccacagagg ctacccggtc aagaaaggac ggcgggcggc gtgcaacccg aggaaatcac
      961 tcgctctacg tgctcgatga gccgaccata gggctacata tggcggatgt ggaaaagctc
     1021 attcgggtct tgcatcgcct ggtggctgca ggcaacacgg tggtcatcat tgagcacaac
     1081 ctcgacctca tcgcggaggc cgactggctg atcgatctcg ggccagaagg cggtgatgca
     1141 ggaggccaca tcgtcgcgga aggcgctccc gaaaccgtcg cccgcgtcag gcgcggatct
     1201 cataccgcga agacgctggc gagcttcctg agggaacgta gtagagtgtc ttcatgattt
     1261 tggtatatcc ccgataacgt catgggagca gtcaattgat agattcagaa atatttgttc
     1321 cggcggatag gtaggtatat aaataacgtg agttcgacgt aagatttgac gctttaaaat
     1381 caaaagctta taaaatcaca agatcatggt ctaaatcggt aagtaattga tctttaaaca
     1441 aagtcacttt tctgcgtatc gttatgtcga actcacgtta atatacaatt tgagtttaga
     1501 ctacccacct cccggcgggt gacaccgagg aaagaga
//
LOCUS       DASQSL010002117         3865 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_203006, whole genome shotgun sequence.
ACCESSION   DASQSL010002117 DASQSL010000000
VERSION     DASQSL010002117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3865)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3865)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3865
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203006"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(223..1509)
                     /locus_tag="VE844_21275"
     CDS             complement(223..1509)
                     /locus_tag="VE844_21275"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC03775.1"
                     /translation="MVTLSFSEAIMAGLEQERAKACELNNLRLYKIAQGLLWVGEGKA
                     LGEVARLWGVSAKTVWNWLKRLMVQGLGWLVGQHYRGRGRKAKLSGTQKQALYEWVVA
                     GPQANGFDCGVWTSAMLVELSWRRFGVYYNPRYLSSLLAKLGLSYQKARFISDRQGDP
                     EHEQARREWVEQTWPAILKQAQARGAVILFADEVSFALWGSLSRTWAPRGQQPVVKTA
                     GRRKGMKLFGAIEFGSGAFYYREAVGYTLSATALKQLKAEGVPAEGVQALRAMKGQRF
                     ETEGAFLQALEQHLGTAALSQYRARLLKLGEGAGKFNAATYEAFLRQLLESITVPIIL
                     LEDGASYHRSQAVEPFRQAYIERLTVYRLPAFSPEFNPIEKLWKNTKKQATHLKYFKA
                     FDELRASVLTAFRTYLEDATQVIRVMKKLRTQAGLA"
     gene            complement(1608..1898)
                     /locus_tag="VE844_21280"
                     /pseudo
     CDS             complement(1608..1898)
                     /locus_tag="VE844_21280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019023238.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0758 domain-containing protein"
     gene            complement(1992..3341)
                     /locus_tag="VE844_21285"
     CDS             complement(1992..3341)
                     /locus_tag="VE844_21285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015162163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2330 domain-containing protein"
                     /protein_id="HZC03776.1"
                     /translation="MRRWLLLLPLLGVLLAPAATQAFCGFYVARADTQLFNKASQVVL
                     VRDEDRTVLTMANDFKGEIDEFAIVIPVPTFIEREQIHVANKALIDHLDAYSAPRLVE
                     YFDPNPCEMVVYKEALSAAAPEPTSRADQERAKSLGVTIEAAYIVGEYDILILSAQQS
                     EGLVIWLRENGYRLPPGTEPVVGSYLKQGMRFFVAKVNLQEQARLGFSYLRPIQVAYE
                     SPKFMLPIRLGMVNADGPQELYIYTLTRKGRVETTNYRTVKLPSDMELPEFVKTEFSE
                     FYRSMFDRQTEKADRRVVFLEYAWDMGWCDPCAADPLSNDELRELGVFWLDPSKAPPM
                     QVMPGSIQGQNVFITRLHLRYDQAHFPEDLAFQETGDRSNFQGRYILHHAWQGGERCP
                     AAEHYLSEELPRRRNQEAQNLALLTGWDLNEIRNKMKLKPAKSKAGQPWWKSLWKDE"
     gene            3467..3808
                     /locus_tag="VE844_21290"
     CDS             3467..3808
                     /locus_tag="VE844_21290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03777.1"
                     /translation="MMEIVFNLTQADLQTFQSHLRSRPPKPARLALRLGYCLGIGLGV
                     LFTLQSVIEAVSDDLSGAITNTLLLLPVICWLVLAWWLNSGAYKKWLISQFLGEYHLI
                     VSTAGIHSIGP"
BASE COUNT          851 a         1138 c          990 g          886 t
ORIGIN      
        1 atcgccaggg agtgatcaat aatcgccagc cagggcttgt ccattggttt gacgtgatca
       61 agtaacgcca accccagtcg taagaagctg ttttaaaacc ctgatcaagg tcattagagt
      121 agtttgaaat ggagacactc aagttgtcac actcccatca cctaccgaag ctatagcttt
      181 tcagaaaatt aattacatag ccccagctag catgcgatct ggtcatgcaa gaccggcctg
      241 agtacgtaat ttcttcatca cgcgaatgac ctgcgtggca tcctcaagat aggtgcgaaa
      301 cgctgtcaac actgaggccc tgagttcatc aaacgccttg aagtacttca aatgggtggc
      361 ctgctttttg gtgtttttcc acagcttctc aatcggattg aactccggtg aaaacgctgg
      421 caagcgatag acggtcaagc gctcgatgta cgcctggcga aacggctcga ccgcttggct
      481 gcgatgatat gacgcaccgt cctcgagcag gataatcggc acggtgatgc tctccagcaa
      541 ttggcgcaag aacgcctcat aggtggcggc gttgaactta cccgcccctt cgccgagctt
      601 cagtaaccgg gcgcgatact ggctcagtgc cgccgtgccc aggtgctgct cgagcgcctg
      661 cagaaacgcg ccttccgtct cgaagcgctg ccccttcatc gcgcgcaggg cttgcacccc
      721 ctccgcaggc acgccctcgg ccttgagctg cttcaaggcg gttgcgctca gggtatagcc
      781 caccgcttcg cgatagtaaa acgccccgct cccgaactcg atggccccaa atagcttcat
      841 ccccttgcgc cgccccgcgg tcttgaccac cggctgctga ccgcggggcg cccaggtccg
      901 actcaacgac ccccacagcg caaacgacac ctcatcagca aataagatca ctgccccacg
      961 ggcttgtgct tgttttaaga tcgccggcca ggtctgctct acccactcac ggcgcgcctg
     1021 ctcatgctcc ggatcgcctt gccgatcgct gataaaacgc gctttctggt aactcaaccc
     1081 cagcttcgct aacagactgc tcagatagcg cgggttgtag tacacgccaa agcgccgcca
     1141 gctcagctcc accagcatcg ctgaggtcca taccccgcag tcaaatccat tcgcctgtgg
     1201 acccgccact acccattcat acagcgcctg tttttgcgta ccgctgagct tcgctttgcg
     1261 cccccgcccg cgatagtgct gccccaccaa ccaacccaag ccttgcacca tcaagcgctt
     1321 gagccagttc cacaccgtct tggcactgac cccccatagc cgcgcgacct cccccagcgc
     1381 cttgccttcc cctacccaca gtagtccttg ggcgatcttg tacagccgca gattgtttaa
     1441 ctcgcacgcc ttggcccgct cttgttcaag acccgccatg attgcttcgg aaaatgacag
     1501 tgttaccata cctttccccc agtcggtttt gtaaagtcgg tgaatctgat cgaacagatc
     1561 aactaacttt atccactggg ggaactactg caagctacag gaaattaaat ttctgaaaat
     1621 ctatagcggc gtccaagctc caaagcagcc tggatctgaa catacttggt tggcccggta
     1681 cctttggtct ggcagaagtc agcggcgttt gcttctagca aaggacgcag cccgccaaag
     1741 ctctggagta aatcgcgggc cagatctaag gcggtcttgc cgtttatgcc ggtccgcaga
     1801 aatatggcca aaagctcagc gtcggataag accctgggac ctttggccaa gagtttttcc
     1861 cgaggacgtt cttcctcggg ccagtcgatg atcgccatag aacctccttg ttcgcatgcc
     1921 gttgaaatgt ctgagctaag cagtatatgt gcctatggca aagaactccc atttacgcca
     1981 gggtttatcc tttattcatc cttccagagt gacttccacc acggttgacc tgctttggat
     2041 ttagccggct tgagcttcat cttgttacgg atctcgttga gatcccagcc ggtgagcagg
     2101 gcgagatttt gggcctcctg gttacggcgc cgcggcagtt cctcggaaag ataatgctca
     2161 gccgcaggac aacgctcacc gccttgccag gcatggtgga ggatatagcg cccctgaaaa
     2221 ttgctgcgat ccccggtctc ctgaaaggcg aggtcttcgg ggaaatgcgc ctggtcatag
     2281 cgcagatgga ggcgggtgat aaagacgttc tgtccctgga tcgagccggg catgacttgc
     2341 atcggcgggg ctttggaggg gtctagccag aataccccca actcgcgcag ttcatcgttg
     2401 gagagcggat cggccgcaca cggatcacac cagcccatat cccaggcata ctccagaaac
     2461 accacgcgcc ggtctgcttt ttcggtctgg cggtcaaaca tactccgata gaactcgcta
     2521 aactcagtct ttacgaactc cggcagctcc atgtcggagg ggagtttgac agtccgatag
     2581 ttggtcgtct ctacccggcc tttgcgggtc agggtataga tgtagagctc ctgcggtcca
     2641 tcggcattga ccatcccaag ccggatcgga agcataaact tgggactttc ataggccacc
     2701 tggatggggc gaaggtagga gaagccgagc ctcgcctgtt cttgaagatt taccttggcg
     2761 acgaaaaagc gcatgccttg cttgagatag ctcccgacca cgggttcggt ccctgggggt
     2821 agacggtaac cattctcccg caaccagatc accaggcctt cgctctgctg cgctgagagg
     2881 atgagaatat cgtattcgcc tacgatatag gcggcttcaa tggtcacccc aaggcttttg
     2941 gcgcgttcct gatctgccct ggacgttggc tccggcgcgg cggcagataa ggcttctttg
     3001 tagaccacca tctcacaggg attgggatca aagtattcca ccagccgtgg cgccgaatag
     3061 gcgtccaggt ggtcgatcaa tgccttgttg gccacatgga tctgctcgcg ctcaataaag
     3121 gtcggcaccg ggatcacaat cgcaaactcg tcgatctcgc ccttgaagtc attggccatg
     3181 gtaaggacgg ttctgtcctc atcgcgcacg aggacaacct gtgaagcctt attgaacagt
     3241 tgagtatcgg cccgggcgac atagaaacca caaaaggctt gcgttgcagc tggagctagc
     3301 agaacaccaa gcagtggaag taacaacaac catctcctca tcggatcctc ctgttggtag
     3361 ataacatcta ttaaatcaac gtagaatgca ttttacccat cagggcgtgc atatgattat
     3421 gcataacctg gtttaagaag ctatcaccaa ggccgatagc ccgtgaatga tggaaatcgt
     3481 atttaacctg acccaagctg atctccagac ttttcagagt catctgcgtt cccggccgcc
     3541 taaaccggcc aggcttgcgt tacgcctcgg ctattgcctc gggataggtc ttggggtgtt
     3601 gtttaccctc cagtcggtta ttgaagccgt atccgatgat ctgagcggtg cgattaccaa
     3661 caccttactc ctgttgccgg tgatttgctg gcttgttcta gcctggtggt taaattctgg
     3721 cgcctataaa aaatggttaa taagtcaatt cctcggtgaa taccacctca ttgtctcgac
     3781 agctggaata cacagcatcg ggccatagtc atcgtttcgg ccaccattcc tcaggcagcg
     3841 attggctgta ggtaaggagg ctttg
//
LOCUS       DASQSL010002118         1193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_95953, whole genome shotgun sequence.
ACCESSION   DASQSL010002118 DASQSL010000000
VERSION     DASQSL010002118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95953"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            171..1112
                     /locus_tag="VE844_21295"
     CDS             171..1112
                     /locus_tag="VE844_21295"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03778.1"
                     /translation="MPTLLWLYLTALLYYRTSASCVALAEALQTVSHDRLTRLLQGDW
                     SGQTLLEFACRTLFVWERGYLILDDTVIPKPFATVIESLAWVFSSQERKPVYGLSLVL
                     LIWTNGTLRIPLGLRVWRKGGPSKYELALELLSYARNHLRCRPDYVLFDAWYPSRVLL
                     KRIRNYGWYFICRLKKNRRFNGRALRAYRHHPYWSETGWLAGGLKVLVVRYGAKYYAT
                     NRLTLPAAEVRRLYRVRSQIEEVIRVCKDQLGLTGCQARSQRAQLHHMTCCLVAFCVL
                     ERERQERHLSIYKLKRQLSFRGRDFVLPALERLRSAA"
BASE COUNT          228 a          353 c          343 g          269 t
ORIGIN      
        1 tgcgcttctg actgataggg cgcgtgaaca atggcaagga ttcttgcatc cggtatccct
       61 cctagctata cccccgtttc tgcttctgcc tcaagattac acaggggtta cgcagggacg
      121 gtgagataga ttagagtgcc catccaaccg cgatgaagga ggggaactcc atgccaacgc
      181 tgctctggct ctacctcacc gcgttgctct attatcggac atcggctagc tgtgtggcgc
      241 tggccgaagc gctgcaaacc gtgtcgcatg accgtttgac gagattgttg cagggcgact
      301 ggtcggggca aacactcctt gaattcgcct gccgcacatt attcgtctgg gagcgaggct
      361 atctcatcct cgatgatacg gtcattccca agccatttgc gacggtgatc gagagcctcg
      421 cgtgggtctt ctctagccaa gagcgtaagc ccgtgtatgg cctctctctc gtgctgctga
      481 tctggaccaa tggcacgctc cggatcccgc tgggcctccg cgtgtggcgc aaaggcggcc
      541 cctcgaagta cgaactcgcg ttagagttgc tcagctatgc tcgcaatcac ctgcgctgcc
      601 gccccgacta tgtcctcttt gatgcctggt atccttcgag agtccttctg aagcggattc
      661 ggaactatgg ttggtacttc atctgccgcc tgaagaagaa tcgccggttc aacggtcgag
      721 cgcttcgagc ctatcggcat cacccctatt ggtcggagac tggttggctg gcaggaggcc
      781 tgaaagtttt ggtcgtcaga tacggcgcca aatactatgc aaccaatcgc ctgacgctgc
      841 cggccgcaga ggtgcgtcga ctctatcgcg tgcgctcgca gatcgaggaa gtcatccgcg
      901 tctgcaagga tcaactaggc ctgaccggct gtcaagcgcg ctcccagcgg gcgcaactcc
      961 atcacatgac ctgctgcctg gtcgcgtttt gcgtgctgga gcgggaacgg caggagcggc
     1021 acctcagcat ctacaaactc aagcgacagc tcagtttccg aggtcgtgac tttgtgctgc
     1081 cagccctgga gcggctgagg agcgctgcgt aacccctgct gataaatgtc tttcaggaac
     1141 cggctgagct gccaataggc gtcggcctag ccttcgtact cggtcaacgc gat
//
LOCUS       DASQSL010002119         1080 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_175260, whole genome shotgun sequence.
ACCESSION   DASQSL010002119 DASQSL010000000
VERSION     DASQSL010002119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175260"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            51..>1080
                     /gene="waaF"
                     /locus_tag="VE844_21300"
     CDS             51..>1080
                     /gene="waaF"
                     /locus_tag="VE844_21300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008739386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HZC03779.1"
                     /translation="MNIQIRQVLIVGPSWVGDMVMAQSLFRVLKQRHQAIHIDVLAPA
                     WSRPLLTRMPEIRNALELPLSHGELKLTRRYQLGRSLWAIGYEWSIVLPNSFKSALVP
                     FWARIPQRTGYVGELRLGVLNDVRRLDKARLPMTVQRFMALGLPPGDPLPKDPFPTPH
                     LTVEAAAVARSLECLGLRPPARLLALCPGAEFGPAKRWPPEYFAEIARRKQAQGWTVW
                     VFGSVRDANAARVVCELAGKGCENLAGRTRLDEAIDLLSLASVVLTNDSGLMHIAVAL
                     NRPLVALYGSSDPSFTPPLSRVARIEYLGLPCSPCFKPACPLGHLDCLKKLKPDRVMA
                     SLDQLLEAR"
BASE COUNT          192 a          329 c          324 g          235 t
ORIGIN      
        1 acagattgtc ggccagagta ccagtcctta gaaaatctcc gcataaaagc atgaatatcc
       61 agatccggca ggtgctcata gtgggtccgt cctgggtcgg ggatatggtc atggcccaaa
      121 gcctctttag ggtgctgaaa caacgtcacc aggcgatcca catcgacgtc ctcgccccgg
      181 cctggagccg cccgctgctc acccgtatgc cggagatacg caatgccctt gaactacctt
      241 tgagccacgg tgagctcaag ctcacccgac gttaccaact gggccggagc ttgtgggcca
      301 ttggctatga atggagcatc gtcctgccca attccttcaa gtctgctcta gtgccttttt
      361 gggcccgtat accgcagcgc acgggctatg taggggagct gcgcttgggt gtgctcaatg
      421 atgtacggcg gctcgataaa gcccgtctgc cgatgactgt gcaacggttc atggccttgg
      481 gtctcccacc cggcgatcca ctgcccaagg acccattccc aacccctcat ttgacggtgg
      541 aggcggctgc ggtggcgagg agcctcgagt gcctgggtct caggccacct gcacggctcc
      601 tcgccctgtg cccgggagcc gagtttggtc cggccaagcg ctggccgccg gaatattttg
      661 ccgagatcgc gcggcgcaag caggctcagg gctggactgt atgggtgttc ggttcggtgc
      721 gggatgcgaa cgctgctcgg gtggtgtgtg aattagcggg taagggctgc gagaatctag
      781 ccggacggac ccgtctcgat gaagctatcg atctcttgtc actggcctcc gtcgtgctga
      841 ccaatgattc gggtttgatg cacatagcgg tggcgctgaa tcggccgctc gtcgcgcttt
      901 acggatcctc ggatccgagc tttactcccc ccttgagccg ggttgcccgc atcgaatacc
      961 tgggactccc ttgtagccct tgcttcaagc ccgcctgccc cctcggccat cttgattgcc
     1021 tcaaaaagct caagcctgac cgggtgatgg caagcctgga tcaactcctt gaagcgcggg
//
LOCUS       DASQSL010002120         1092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_121279, whole genome shotgun sequence.
ACCESSION   DASQSL010002120 DASQSL010000000
VERSION     DASQSL010002120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1092
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121279"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..458)
                     /locus_tag="VE844_21305"
     CDS             complement(<1..458)
                     /locus_tag="VE844_21305"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HZC03780.1"
                     /translation="MVASEGINQSPTTSWIKGLLTRRRRTPIIPLTIIGVMVMTAVFA
                     DFLTAYSPTEISLSTRLRPPFWQERGSLDYLLGTDPMGRDLLTRMIYGARISLLVAVL
                     SLIVGGGIGAALGLIAGYYGGRLDALIMRVADTTMAFPIILFAILFVVVVG"
     gene            complement(465..>1092)
                     /locus_tag="VE844_21310"
     CDS             complement(465..>1092)
                     /locus_tag="VE844_21310"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC03781.1"
                     /translation="IKLALVSMVITIALAFPLGVLAAVRKGTPIDTFANLIAVLGQSL
                     PQFWVGIVLIQIFAVHLRWLPVAGTGSFWHYILPGFTLGWFLVAGIMRLLRSSMLDVL
                     DSEFIKLARIKGVSEGGVIWKHALKNAFIPVLTFAAIYLAILITGAILVETVFAWPGI
                     GQLIFQGIVYRDFPVIQAVVMLTALIVVTVNFVVDIIYAYVDPRIRYS"
BASE COUNT          291 a          318 c          291 g          192 t
ORIGIN      
        1 cccaccacga cgacgaacaa aatagcaaac aaaataatcg gaaaggccat tgtagtatca
       61 gcgacgcgca tgatgagtgc gtccaggcgc cctccatagt acccggcaat cagccccaga
      121 gccgcgccga tccctcctcc aacgatcagg ctcagcaccg ccaccagtag cgagatgcgt
      181 gcgccataga tcattctggt cagcaaatcg cggcccatag ggtctgtccc taagaggtag
      241 tcaagacttc cccgctcctg ccaaaacggc ggtcgcagcc ttgtcgaaag agaaatctcc
      301 gtgggggaat aggcggtcag gaagtcagcg aatactgcgg tcatcaccat gacaccaatg
      361 attgtcaggg gaataatcgg tgtacgccga cgccttgtca acaggccttt gatccagctt
      421 gtggtagggg attggttaat accttcgctt gcgaccatgg catcctaact atagcggata
      481 cgggggtcaa cataggcata gataatgtcg accacgaaat tgaccgtcac cacgatgagg
      541 gccgtcaaca tcaccactgc ctgaatcacc gggaaatccc gatacacaat accctggaag
      601 atcagctggc cgatgccggg ccaggcgaag acggtttcta ccagaatcgc gccagtaatg
      661 aggatggcca gatagatggc ggcaaaggtc aagacgggga taaaggcatt cttcaaggcg
      721 tgcttccaga tgaccccccc ttctgatacc cccttgatgc gggccagctt gatgaactcg
      781 ctgtccagga cgtccaacat gctcgagcgc aggagccgca tgatccctgc gaccaagaac
      841 catcccagcg tgaatccggg caaaatgtaa tgccaaaaac tccctgtccc cgccactggt
      901 aaccagcgca ggtggacagc aaagatctga atgaggacaa ttcccaccca gaattggggc
      961 agcgactgcc ccaagacagc aatgagattg gcaaatgtat cgatcggcgt gcctttccgc
     1021 accgccgcca ggacccccag gggaaaggcc agtgcgatgg tgatcaccat ggagacaagg
     1081 gccaatttga tc
//
LOCUS       DASQSL010002121         1400 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_40166, whole genome shotgun sequence.
ACCESSION   DASQSL010002121 DASQSL010000000
VERSION     DASQSL010002121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1400
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40166"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(383..721)
                     /locus_tag="VE844_21315"
     CDS             complement(383..721)
                     /locus_tag="VE844_21315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03782.1"
                     /translation="MRKLMMLAAIVAIVLVAAAPAIAQLEQEFSQEDVESGDVEPVVE
                     ISNKGNNVNICGTVLQSANSGNVQNEQGVVQYEDEVDDIEFEGSTITFEVAAEGECTQ
                     TINQAASAAA"
     gene            complement(855..1226)
                     /locus_tag="VE844_21320"
     CDS             complement(855..1226)
                     /locus_tag="VE844_21320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03783.1"
                     /translation="MRKLMLLAAILALALVAAAPVIAQEAKIEGGPKAKAEKGKADAF
                     ISEDVKAKAEPGKAEAKAGGAEAKAKAPPPPPPPPPPPPPPPKALPPTGGGIAETASL
                     VGLGAGALLVAGGLIARRIIR"
BASE COUNT          252 a          449 c          379 g          320 t
ORIGIN      
        1 tgccccgctc ggcttccagt tgcgttgtct ccataggcgc ttagcataag gggtatcggc
       61 gatttttgaa accgcttcca gctcaagttg tgcggcattc caggaggttc atccgccgga
      121 agatggagtc gatggtattc catttgcggt tgcgcagtct tctagctcgc gctccgcggt
      181 catacaagtg tcttccagct ctgtcagcct ggcccaccca cagcttttgc ttccctgtct
      241 aaccgttaag gcgaaagtgc tgcaaatacc tacaacaata tagggttccg acaaatattc
      301 tcggaaacac tcggggggcc gagggataaa aagaaggccg gggctaaaaa gccccgacct
      361 tctggcgttg ctgcttcttg ccttatgcgg cggccgaagc ggcctggttg atcgtctgtg
      421 tgcactcgcc ttcggccgca acctcaaagg tgatagtgct gccctcaaac tctatgtcgt
      481 caacctcgtc ctcgtactgg acgacgccct gctcgttctg aacgttgccc gagttggcgc
      541 tctgcagaac cgtaccgcaa atattgacgt tgttgccctt gtttgagatc tcgaccacag
      601 gctctacgtc gccgctctcc acgtcctcct gggagaactc ctgctcaagc tgagctatgg
      661 cgggagcagc cgctaccagc actatagcca ctatcgccgc caacatcatt aacttcctca
      721 tgcttccctc tacctcctcc ttttttccgt taccgcaacc ttattccttg ctcacaaccc
      781 cggggtagga gggggccctg tctcgaaagg ggggcccgcc tccagaagtt accccgctta
      841 ctctctctca ctcattagcg gatgatcctg cgggcgatga gccccccagc caccagcagg
      901 gcgccagcac caagccccac taaggaggcc gtctcagcaa taccgccgcc ggtaggcgga
      961 agcgccttag gcggtggtgg tggcggtggt ggtggcggcg gtggtggtgg cggagccttt
     1021 gccttggcct ctgcgccgcc ggcctttgcc tcggccttgc cgggctcggc cttggccttg
     1081 acgtcctcgc tgatgaaggc gtcggcctta cccttctcgg ccttggcctt cgggccaccc
     1141 tcgattttgg cttcctgggc tatgacaggg gcggcagcaa ccagcgccaa cgccagtatc
     1201 gccgccaata gcatcaactt cctcaactct tctcacctcc ttctctagat tctctaagaa
     1261 gggctactct gctccaccaa gcgaagccgg acggacttaa gagagttgct gcggagaggg
     1321 gaggattcga acctccgacg ccggtaatac taccggcgag gcggttttca agagaccgct
     1381 gcattcgacc gctctgccac
//
LOCUS       DASQSL010002122         3144 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_203140, whole genome shotgun sequence.
ACCESSION   DASQSL010002122 DASQSL010000000
VERSION     DASQSL010002122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3144
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203140"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..653)
                     /locus_tag="VE844_21325"
     CDS             complement(<1..653)
                     /locus_tag="VE844_21325"
                     /inference="COORDINATES: protein motif:HMM:NF024940.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC03784.1"
                     /translation="MQPPLFIRPLSTAEVRELAASLRSRDAFTLRRSQILLASARGCR
                     SSQIAEYLGCDDQTVRNALRAFQDEGLGCLTAKSSAPHRVQAVWSKARDDELRELLHQ
                     SPRVFGKPRSTWTLQLIAQVCFERGMTSRELSAEAIRRTLERLDINWKRAKHWMTSPD
                     PHYALKKAHRDRLIRLSAQHPEWVLGFEDEVWWSRVAQPSLHAWTAGPPLKVLLLKS"
     gene            737..2227
                     /locus_tag="VE844_21330"
     CDS             737..2227
                     /locus_tag="VE844_21330"
                     /inference="COORDINATES: protein motif:HMM:NF033517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HZC03785.1"
                     /translation="MLALFRIVLYNSGIGSGRSGQLRDTLGWIMVSSLPLPEGLPLDA
                     ASWEQTPLVVRQLVVHLLVVTQQQTAQIQTLEARIGALEARLHQRSSNADRPPSSDSP
                     YEKRPARSGGQGQPGARPGHPGYRQALLAPTEVVEVMPAACPCAPQEVAATTPYYTQQ
                     VIELPEIQMVVTHVVLHKTRCPRCGRLLKAELPAEYRYGYGPRLTALIGELSGPQRDS
                     RSAVQEFCTSVLGVPISRGAIQRAVDRVSEALKPQYEAIAEKARAAKVNSVDETAWYQ
                     HGVLAWLWVMVNPTVAFFHVQASRSQAAFKALVKQWSGILVSDGYGVYRQWMHQRQAC
                     MAHLIRRARGLSERKAPELTRFGCRIMAELQRLVHWATAPPTSGEVQTWYARMVHLVA
                     QYRQRQDDAGTFARTLDREMGDLWTFVVEEGVEPTNHRAERALRFAVLWRKMMQGTYH
                     EKGDRWVERILSVRETCRLRGVPTFPVLVDAVTCHFNGQPPDVSWI"
     gene            2269..3012
                     /locus_tag="VE844_21335"
                     /pseudo
     CDS             2269..3012
                     /locus_tag="VE844_21335"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          629 a          923 c          966 g          626 t
ORIGIN      
        1 tctgatttca gcagcagcac ctttagtggc gggccggcag tccaggcgtg cagcgaaggc
       61 tgggccaccc ggctccacca cacctcatcc tcgaagccga gtacccactc cgggtgttgg
      121 gccgacaggc gaattagtcg gtcccggtgg gccttcttca gcgcgtagtg cggatccggg
      181 ctcgtcatcc agtgcttggc ccgcttccaa ttgatgtcca atcgctccag cgtacggcgg
      241 atcgcctcag cgctcaactc ccgggaggtc ataccccgct cgaagcagac ttgcgcaatc
      301 agctgcagcg tccaggtgct ccggggcttg ccaaagaccc gcgggctctg gtgcaggagt
      361 tcgcgcaact catcatcgcg cgccttcgac cagacggcct ggacccggtg aggggccgac
      421 gactttgccg tcaggcaccc cagaccttca tcctggaagg cgcgcagggc gttacgcacg
      481 gtctggtcgt cgcacccaag gtactcggcg atttgggacg agcggcagcc gcgggcgctc
      541 gccagcagga tctgggaccg gcggagggtg aaggcgtcac gggaccggag actggccgct
      601 agctcgcgca cctcggcggt tgagaggggt cggatgaaca gaggaggttg catacctgaa
      661 cctcccacca cacaatacct tcattgttta gcgggcagct cgttaaggtc acccaaagag
      721 gcctgccacc cattttgtgc tggcgctttt ccggattgtt ctctataaca gcggcatcgg
      781 ttccggacga agcggccagt tgcgggacac gctagggtgg atcatggtct cttccctccc
      841 cctgccagaa gggttgccgc tggacgcggc cagctgggag cagacgcccc tcgtcgtgcg
      901 gcagttggtc gtgcatctgc tcgtggttac ccagcagcag acagcgcaga tccaaaccct
      961 tgaagcgcgg attggagccc tcgaggcccg cttgcaccag cgctcaagca atgccgatcg
     1021 tcccccctct tctgattccc cgtatgagaa acggccagcc cgctccggtg ggcaggggca
     1081 accaggcgct cggccaggac accccgggta tcgccaagcg ttgttggcgc ccacggaagt
     1141 cgtcgaggtc atgcccgcag cctgtccctg tgcgccgcag gaggttgccg cgacaacgcc
     1201 ctattatacg cagcaggtga ttgagctgcc cgagatccag atggttgtga cgcatgtcgt
     1261 gttgcacaag acgcgttgtc cccggtgtgg ccgcctcctc aaagccgagc tgcctgcgga
     1321 gtaccgttat gggtatggcc cccggttgac cgccctcatc ggggagctgt cgggtccgca
     1381 gcgggacagt cgcagcgcgg tgcaagagtt ttgcacgtcc gtcttgggag taccaatcag
     1441 caggggcgcc attcaacggg cggtggatcg ggtctcggaa gccctcaaac cccagtacga
     1501 agccatcgca gaaaaggccc gcgccgccaa ggtcaactct gtggatgaaa ccgcgtggta
     1561 ccagcatggc gtattggcct ggctgtgggt gatggtcaac ccgacggtcg ctttctttca
     1621 tgtccaagcc agccgcagcc aggcagcctt taaggcgctc gtcaagcaat ggtccgggat
     1681 cctggtcagc gatgggtatg gggtgtatcg ccagtggatg catcagcgcc aggcctgtat
     1741 ggcgcatctc atccgtcggg ctcgtggctt atccgaacgg aaggcgcccg agctgaccag
     1801 gtttggatgc agaatcatgg cggagctgca acggttggtg cactgggcca cggcaccgcc
     1861 gaccagcggc gaggtgcaga cctggtacgc gcgcatggtc cacctggtcg cccagtatcg
     1921 gcagcggcag gatgacgcgg ggacgtttgc ccgcaccttg gatcgcgaga tgggggacct
     1981 gtggacgttt gtggtagagg aaggggttga gcccaccaac caccgcgccg agcgggcgct
     2041 ccgctttgcc gtgctctggc ggaagatgat gcaaggcacc taccacgaga agggcgaccg
     2101 ctgggtcgag cgcatcctct cggtgcggga gacgtgtcgc ttgcggggcg tccccacctt
     2161 cccagtctta gtggatgccg tgacgtgcca ctttaacggc cagcctccag atgtctcctg
     2221 gatttgacgg ttccgacccc ctgaacactt accctctatg gagcaagccc tgattttatc
     2281 gaggcgttgg ggcagttgaa gcttcaattt gtcgtcgcaa tccgagagaa tcatggtgtc
     2341 tggatgccca tggaggagcg aatcgagtac acagcctggc aggagtttga tcgagtcttc
     2401 accaatgggg aaacggaaac acgctggatt cgggaagtca tttatggcca gcgccatgct
     2461 ctccggtatt atcagatcac cacagacatc gaagagcaac ctccggaaag tacctggttt
     2521 cttatgacga atttacctgg tgacattcaa gccgacctgg gcaacgtcta cggggtgcgc
     2581 acctggatcg aatatgggtt taaacagagc aaaaatgaac tgggatgggc agatttcagg
     2641 ctcactgagt accaagacat tgagaaatgg tgggagattg tctcgagtgc ctatctcatg
     2701 gtgagcctcc aagcccagat ctgtaccgga ggatcgcctg cacaggcaca cacagaacca
     2761 tcgatgtctc ttgaagaacc acccagtatg cagcaagcag atgtccaaga gcggttttat
     2821 cagcataaat ggtgggatcc tagaagaggg tggaagatga cgctgaataa cttacgtctg
     2881 atcattcagc catatatgtc ctattgtctg atgctgccgt ggctccacgt cttcacgatt
     2941 ccattctttc aggatggatt tgagcgctta atagcaagca tgaacgattt caaaggtttt
     3001 gccccagttt gacagaagag ggctactgac tcggacatca agatctaaag ttttgctcct
     3061 tcccaaaggt attctctccc tccttcagaa tggcgcagag gggctgcgga ccacgcccca
     3121 aacgtgccag caatctgcgc cagg
//
LOCUS       DASQSL010002123         2567 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_96034, whole genome shotgun sequence.
ACCESSION   DASQSL010002123 DASQSL010000000
VERSION     DASQSL010002123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2567
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96034"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..550)
                     /locus_tag="VE844_21340"
     CDS             complement(<1..550)
                     /locus_tag="VE844_21340"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC03786.1"
                     /translation="MIGRTFGAIMGRELKRMLRQRGRLVSAMVRPLIWLAVIGTGMQT
                     LIEGSGAGSYKHFLIPGLLCMVLLFGALLASLSLVYDKEAGIMRMLIIAPFAHYWIVL
                     ARTASATLVGVIQATMLTLILVPFGYLTAPASLFLLFLGLMITSLTCASLGMLIAVYS
                     QTLDDFAVIMNFVIFPMFFLSGA"
     gene            complement(552..1502)
                     /locus_tag="VE844_21345"
     CDS             complement(552..1502)
                     /locus_tag="VE844_21345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013034387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZC03787.1"
                     /translation="MPNEASQNLAIQAVDLGKSYGAIQAVAGLDLTIPEGQFFGLLGR
                     NGSGKTTTLHMLSTLIRPTRGHAYVAGYNVVQAPVEVRRSIGLVFQESALDRMLTVEE
                     NLRFAGALYDLPARLVESRSEELLTLFDLGGKRQIRVATLSGGMRRALDIARGVLHRP
                     QILLLDEPTLGLDVINRRAIWQFLARLRKEEGTTLVLTTHYLEEATGCDQVAFMKDGR
                     IIGQGRPLDLIRWLGAYILEIETEAPGQQAALLGNTKLGPPLIEGHRLLFRIPDEGFP
                     LAKLHQELHAEKIRSVQLRHPDLNDVYIWLNRSTAEGGNR"
     gene            complement(1503..>2567)
                     /locus_tag="VE844_21350"
     CDS             complement(1503..>2567)
                     /locus_tag="VE844_21350"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0019808 - polyamine binding [Evidence
                     IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein"
                     /protein_id="HZC03788.1"
                     /translation="MRRSMTLFLSLCLTSLSLSLAAGEKTAQKPPALARELYLFNWEN
                     YLKPAILEGFKKEFGVRVIEDHFTSNEEMLAKLQVGGGGYDIIVPSDYMVRTLIREAR
                     LAPLNPEHLPNLKNIEARFRDPAYDPGNRFSIPYLWGVTGIGYSRKAAMPPPTSWHDL
                     FGPSTLKKYSGRISMLNDMRDALGAALIYLGYSPNSHDPKEIDRAKEVLLRQKPFLAK
                     YDSETYEDSLTAKELVLAQGWSGDFFAAQREDPDIGFVVPKEGAFLFVDNLAIPRDSK
                     RHYTAEVFINYLLRAEVAAQNSSHLSYPTPNAAARALIDPKLDSARYTVPADVKLYLT
                     EDLGPAGQWYERAWTEVKAD"
BASE COUNT          561 a          708 c          769 g          529 t
ORIGIN      
        1 gtgcgccgct tagaaaaaac atcggaaaga tcacgaagtt catgatcacc gcaaaatcat
       61 ccagggtttg gctgtagacc gcgatcaaca tcccgaggct cgcgcaggtg agcgaggtga
      121 tcataagccc tagaaacaaa agaaagaggc tggcgggggc ggtgagataa ccgaagggca
      181 ctaggatcag cgtcagcatc gtcgcctgga tcaccccgac cagggtggcg ctcgcggtgc
      241 gggccaggac aatccagtaa tgggcaaagg gggctatgat caacatccgc ataatcccgg
      301 cctccttatc gtacactaag gagagcgagg cgagcagggc gccgaacagc aacaccatgc
      361 aaagtaggcc agggatcaga aagtgtttgt agctgcccgc gccagatcct tcgatgagcg
      421 tctgcatgcc cgtaccgatg accgcgagcc agatcaaggg gcgcaccatg gcgctgacga
      481 gccggccgcg ttgccggagc atacgcttga gctcacgccc catgatggct ccgaatgtcc
      541 gtcctatcat tctatctatt ccctccttct gccgtagagc ggttcagcca gatatagaca
      601 tcgttcagat cgggatgccg cagttgtacg gaccggatct tctcagcgtg taactcctgg
      661 tgcaatttgg cgagaggaaa tccctcatcg gggatgcgga acagcagccg atggccttcg
      721 atgagcgggg gtccgagctt tgtatttcct aaaagcgctg cttgttgtcc cggcgcttcg
      781 gtctcgatct caaggatata ggcgccgagc caccggatca gatccagggg gcgaccttga
      841 ccgatgatcc gcccgtcttt cataaaggcg acttgatcgc agcctgtggc ctcttccaga
      901 tagtgcgtgg tcagcaccag ggtggtgcct tcctctttac gcaagcgcgc cagaaattgc
      961 cagatcgcac ggcggttgat gacatcgagg ccgagagtcg gttcatccaa cagcaggatc
     1021 tgggggcggt ggagtacgcc ccgggcgata tcgagcgcgc gtcgcatgcc ccccgaaagg
     1081 gtagccaccc ggatctggcg tttaccgccg agatcaaaga gcgtcagcaa ctcctcgctg
     1141 cggctctcca ctagccgtgc tgggagatca tacaaggctc cggcgaagcg gaggttttcc
     1201 tcgaccgtga gcatccgatc cagggccgac tcctggaata ccaggccgat ggaacggcgc
     1261 acctcgaccg gtgcttggac tacattgtag ccagcgacgt aggcgtgacc tcgggttggc
     1321 cggatcaagg tgctgagcat atggagggtc gtggtcttgc ccgagccgtt gcgtcccaat
     1381 aaaccgaaga actgaccttc cgggatggtc agatccagtc cggccacggc ctggatagcg
     1441 ccataggatt tacccagatc gacagcctgg atcgccaagt tttgggaagc ctcattgggc
     1501 atctagtcgg ccttgacctc cgtccaagcc cgttcatacc actgccccgc tggaccgagg
     1561 tcttcggtta aatagagctt gacgtccgca ggcactgtat aacgcgcgct gtcgagtttg
     1621 gggtcaatca aggcgcgggc tgccgcatta ggtgtggggt aactgagatg gctggaattt
     1681 tgggcggcga cttcggcgcg gaggagataa ttgatgaata cctcggccgt atagtgccgc
     1741 ttcgagtctc tggggatggc gaggttgtcc acaaacagaa aagcgccttc tttgggcacg
     1801 acaaagccga tatcgggatc ctcccgttga gccgcaaaaa aatccccgct ccagccctgg
     1861 gcgaggacca gttccttggc agtcaaggaa tcctcatagg tctcgctgtc atatttggca
     1921 agaaagggtt tctgacgcag caacacctct ttggctcgat cgatctcttt tggatcgtgg
     1981 ctatttggcg aataaccgag atagatcaag gcagcaccca gggcatcgcg catgtcattg
     2041 agcatactga tccgcccgga gtattttttt agggtggagg ggccaaacag atcgtgccag
     2101 ctggtcgggg gtggcatcgc tgctttgcgg ctgtagccga tgccggtcac cccccagagg
     2161 tagggtatcg aaaatcggtt acctggatcg taggcaggat cgcgaaaacg cgcctcgatg
     2221 tttttgagat taggaagatg ctcagggttc aagggggcga gcctggcctc acggatcagg
     2281 gtacgaacca tgtaatcact cggcacgatg atgtcatacc cgccgcctcc tacctggagc
     2341 ttggcgagca tctcttcatt gctggtgaag tggtcttcga tgacgcgtac accaaactcc
     2401 tttttgaacc cttcgaggat cgcgggcttg agataattct cccaattgaa aagatacaac
     2461 tccctggcca gtgccggggg cttctgcgca gtcttttcac ccgcggctag ggagagcgac
     2521 aggctggtca agcaaagact cagaaacagc gtcatggatc ttctcat
//
LOCUS       DASQSL010002124         1197 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_121352, whole genome shotgun sequence.
ACCESSION   DASQSL010002124 DASQSL010000000
VERSION     DASQSL010002124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1197
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121352"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..416
                     /locus_tag="VE844_21355"
     CDS             <1..416
                     /locus_tag="VE844_21355"
                     /inference="COORDINATES: protein motif:HMM:NF040298.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF6008 family protein"
                     /protein_id="HZC03789.1"
                     /translation="HLTGNWIFFAAGVIPIYLALRSLKTERGAMRATRAAFWLQLVHV
                     LEHVLLTSTYLLVGRAIGLSTLFGATFYLGGAWATSIRIWWHFLMNLAVTGAILLALR
                     ELRRAKVRRARLLTTAAPARREHTRHRKRPHPVLQ"
     gene            complement(458..1030)
                     /locus_tag="VE844_21360"
     CDS             complement(458..1030)
                     /locus_tag="VE844_21360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03790.1"
                     /translation="MTAMVKPMRRRNFLAPKFFVPLALLLWLLVSLTFMLLIPRAEAY
                     DPATGCPSNNTEAMEGVYSPNRFRIYDLCQEAGGQVTFYEEWSDGDWNVYVRLDQANK
                     NLVNTRSIKNLQAWRQARENGGADMIWEAIPKDQGSCGNPGALGPEPQPGERLQVRGV
                     YVYDKWHQWFEIHPLTQITHTNNVQTCTRS"
BASE COUNT          238 a          357 c          326 g          276 t
ORIGIN      
        1 ttcacctgac gggtaactgg atcttctttg cagcaggggt tatccccata tacctcgccc
       61 ttcgcagcct caagacggaa cgcggggcaa tgcgcgctac cagggccgcc ttctggctgc
      121 agctcgtaca cgtcctcgag cacgtcttgc tcacgagcac ctatttgctg gtgggccggg
      181 cgatcgggct gtcgacgctg tttggagcta ccttctacct cgggggcgcc tgggcgactt
      241 cgatccgcat ctggtggcac ttcctcatga acctggcggt gacgggtgcc atcttgctcg
      301 cgctgcgtga gcttcgtcgc gccaaggtcc gtcgtgcaag gctgctcacc accgcagcgc
      361 cggcgagaag ggagcacacg agacaccgga aaaggccaca tccggtgttg caatagttgg
      421 cgctgggctg ccaagagcgc aaaaaggagg accgggacta agacctcgtg caagtctgga
      481 cattatttgt gtgcgtgatc tgagtcagag gatggatctc gaaccactga tgccatttat
      541 cgtaaacgta cactccccgt acctgtaggc gctctcccgg ctggggctcg ggacccagag
      601 ccccaggatt gccacaggag ccctggtcct taggaatggc ctcccagatc atgtcggctc
      661 ccccgttttc ccgcgcttgc ctccaagctt ggaggttctt tatgcttctg gtatttacca
      721 ggtttttgtt agcctgatcc agccgcacat atacgttcca gtccccgtcg ctccattcct
      781 cataaaaggt tacctggcca cccgcctcct ggcagaggtc gtaaatccta aagcggttcg
      841 ggctgtacac cccttccatc gcctcagtgt tattagaagg gcatccagta gccggatcgt
      901 atgcctcagc gcggggtatt agcaacataa aggtaagaga cacaagtagc cagagtagaa
      961 gcgctaaagg aacgaagaac ttgggtgcca agaaattgcg ccgccgcatc ggcttaacca
     1021 tcgcggtcat cggtgggatc ccccctcact tatccgcgta tccctttaaa gggtctgcta
     1081 acaactatat tttgggttct tacgtacctc aatataccat atcctggcat caacctaatg
     1141 ctgaccgcgg tcgggaactg ccccctcggt caggtggctg tacctttggt ttgcttt
//
LOCUS       DASQSL010002125         1353 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_203170, whole genome shotgun sequence.
ACCESSION   DASQSL010002125 DASQSL010000000
VERSION     DASQSL010002125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1353
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203170"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            196..>1353
                     /locus_tag="VE844_21365"
     CDS             196..>1353
                     /locus_tag="VE844_21365"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HZC03791.1"
                     /translation="MTRETKADRRFMYIGGEWIDSVDGETFERVSPVTGEVLASLPKA
                     NREDAQAAIEAANRARLHIASMPVFERAALCHAIADVLQSKHKSMGEELSLEQGKTYR
                     EACDEILFAAELYRDAAENIKRLETSIVPSIDPNKRILTIRQPHGVVAVITPWNFPVG
                     IPSEYLSAALAAGNTVVWKPAPTSSIIAIRLVECFLEAGVPEGSVNLLFGDAEVGDEM
                     VANPGTHAVGLTGSSAVGNAVAQRAGAKPILLELGGNGPTIILDDADLERAIEGTAFG
                     CYHNAGQICQSSERILTHNKIHDAVLEGLVDKARSIKLGHPLDQTTTMGPLNNEGVAK
                     KMDEHLADAAQKGATVVAGGRRAEGFPTALYYEPTVVDGVPPESLLNHEETF"
BASE COUNT          310 a          399 c          410 g          234 t
ORIGIN      
        1 cctggcgagt cggggccacc tgggtaccta cttggtgaaa cggagcctta gccttttgtg
       61 ggcgttcagc aggttaggac cgtgaccggg gcacagctgt tgacttaact cctcactgtt
      121 tgataaaaca acatcgggtg acaaatgcct cgaacctagt caaccggagc tcgggcagtg
      181 ggaagagtga ttaccatgac aagggagacg aaggccgacc gccgcttcat gtacatcggg
      241 ggcgaatgga tcgactctgt agacggcgag acctttgaga gggtaagccc ggtcaccggc
      301 gaggtcctag cgagcctacc aaaggccaat agagaggatg ctcaagccgc catcgaggcg
      361 gcgaaccggg ccagattaca tatagcctcc atgcccgttt tcgagcgggc cgcactgtgc
      421 cacgccattg cagatgtcct ccaatccaag cacaaatcca tgggcgagga actatctctc
      481 gaacaaggta agacctaccg cgaagcctgc gacgagatcc tcttcgccgc cgaactctac
      541 cgcgacgccg ccgagaacat caagcggttg gaaacgagta tcgttccatc gatcgatccc
      601 aacaagcgca tcctcaccat tcgccaaccg catggcgtgg tggcggtaat caccccttgg
      661 aatttccccg taggcatacc cagcgagtac ctgtcggctg ccttggccgc aggcaacacg
      721 gtggtctgga agcctgcccc gacctcttcc atcatcgcga tacggctggt ggagtgcttt
      781 ctcgaagcgg gcgtgcctga agggtcggtc aatctcctct tcggcgatgc cgaggtggga
      841 gacgagatgg tcgcaaaccc gggcacgcac gcggtgggcc tcaccggcag ctcggccgta
      901 ggcaacgctg tggcccagcg agcgggagcc aaacccatac tcttggaact cggggggaac
      961 gggcccacga tcatcttgga cgacgccgac ctagaaaggg ccatagaggg aacggcgttt
     1021 ggctgttacc acaacgccgg gcagatctgt cagtctagcg aacggatcct gacccataac
     1081 aagatccacg acgccgttct cgagggcctg gtggacaaag cgcgatccat caagctggga
     1141 caccctctcg accagacgac gaccatggga ccgttgaaca atgaaggcgt tgcgaagaag
     1201 atggacgagc acctggctga tgcggcgcaa aagggtgcaa ccgtggtcgc tggggggaga
     1261 cgagcggaag gcttcccgac agcactgtac tatgaaccaa ccgtcgtgga cggagtcccg
     1321 cccgagtctt tactcaacca tgaggagacg ttc
//
LOCUS       DASQSL010002126         1032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_121362, whole genome shotgun sequence.
ACCESSION   DASQSL010002126 DASQSL010000000
VERSION     DASQSL010002126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121362"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            79..1014
                     /locus_tag="VE844_21370"
     CDS             79..1014
                     /locus_tag="VE844_21370"
                     /inference="COORDINATES: protein motif:HMM:NF025677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase zinc-binding domain-containing
                     protein"
                     /protein_id="HZC03792.1"
                     /translation="MVKPFHPNNLIPLTRCNPMMAHVSRDWSVFKQIFADHWPGFQHA
                     HPRYQTSYYDDLVANMLECGNPDKMGYLAYRCHQCGQGKHLVSMSCKSSLCLRCSKVY
                     VDNWVSQVSRVLHKGVIYRHIILTVPAMFRPIFYQNASALVNALMRCGTRCLDDFYSE
                     VKGKALKGGYITVIHTHGRNGQYHPHLHVIATSGGYDEVEEHWEHLSFLPYELLRRKW
                     QWHLMDTFRKTLATDEMKCLVDQCYRQYPGGLVTNVQKGQVPSQYQSLASYVAKYVVS
                     RRSRSGVSIVMMVTVSPITTGRTGRTGRPMKRSMS"
BASE COUNT          221 a          266 c          315 g          230 t
ORIGIN      
        1 cctatgactc aataacaagc gggtcggctg agggtgcccg gggactagcc aatgagggtt
       61 gtacgaagcg gttgaattgt ggtaaaaccg tttcacccaa acaacctgat ccccctcact
      121 cggtgcaacc cgatgatggc acacgtctcg cgggactgga gtgtcttcaa gcaaatcttt
      181 gccgatcact ggcccgggtt tcaacacgcc catccgcgtt accagacgtc gtactatgat
      241 gacctggtgg ccaacatgct cgagtgcggc aaccccgaca agatgggtta cctcgcctac
      301 cgctgtcatc agtgtggtca gggtaaacac ctggtgtcga tgagctgtaa atcgtcgttg
      361 tgcctacggt gttcgaaggt ctacgtggac aactgggtga gccaggtgag ccgtgtactc
      421 cacaagggtg tgatctatcg gcacatcatc ctgacggtac cggcgatgtt tcgccccatc
      481 ttctaccaga acgcctcggc gttggtgaat gcattgatgc ggtgtgggac gcggtgcctg
      541 gatgattttt atagcgaggt gaagggcaag gcgctcaagg gtggttatat cacggtcatc
      601 cacacgcacg ggcgcaacgg tcagtaccac ccgcacctgc acgtgatcgc tacgagtggt
      661 ggctatgatg aggtggaaga acactgggag catttgagtt ttttgcccta cgagctgctg
      721 cgtcgcaagt ggcagtggca cttgatggac acgtttcgaa agacgctggc aacggacgag
      781 atgaagtgtc tggtggatca gtgttaccgg cagtatcccg gtggtctggt gaccaacgtg
      841 caaaagggtc aggtgccgtc gcagtaccag agtttagcga gctacgtggc caagtatgtg
      901 gtgagccgcc gatctcggtc aggcgtatcg atcgttatga tggtcaccgt gtcacctatc
      961 actaccggtc gcaccggacg caccggacga cctatgaaac ggtcgatgtc atgacgttta
     1021 tcggccggat gg
//
LOCUS       DASQSL010002127         1118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_40247, whole genome shotgun sequence.
ACCESSION   DASQSL010002127 DASQSL010000000
VERSION     DASQSL010002127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1118
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40247"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1104)
                     /locus_tag="VE844_21375"
     CDS             complement(<1..1104)
                     /locus_tag="VE844_21375"
                     /inference="COORDINATES: protein motif:HMM:NF017591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase PhoX"
                     /protein_id="HZC03793.1"
                     /translation="MLGMLNNCAGGKTPWGTALSCEENFDQYFGNFAALKARDPAKAA
                     LYERLSPEDGQTERKWERFDARFDATQEPNEYARFGYVVEIDPYDPGFTPKKRTALGR
                     FKHEGAVSVLTRDGRIAVYLGDDGRFEYVYKFITRGMFEPWDRPHNLALLDEGTLYVA
                     RFKPDGTGEWLPLVYGKGPLTAKNGFPSQAEVLVNTRGAADLLGATKMDRPEDIEVSP
                     TTGKVYLVLTNNAERTEPSGNPGEDAANPRTPNPHGHIIEIEEEGSDPGALVFRWEIF
                     MLCGDPSNPDHYTFFAGFDPSQVSSIANPDNLIFDDEGNLWIATDEQIKAEDFGWNDG
                     VFAVPTEGPERGFLRQFLSAVPGAEVCGPEFSGD"
BASE COUNT          208 a          340 c          330 g          240 t
ORIGIN      
        1 atccccggag aactcgggcc cacagacctc agcgcccgga acggcactca gaaactggcg
       61 caggaacccg cgctcaggac cttccgtcgg cactgcaaag acgccgtcgt tccacccgaa
      121 gtcttcggcc ttgatctgct cgtcggtggc gatccagagg ttgccctcgt catcgaagat
      181 gaggttgtca ggattggcga tggagctgac ctggctcggg tcgaaaccgg cgaagaaggt
      241 gtagtggtct ggattcgatg gatctccgca gagcatgaag atctcccagc ggaacaccag
      301 cgccccagga tcgctgccct cctcttcgat ctcaatgata tgaccatgag ggttaggggt
      361 gcgagggttg gccgcgtcct ctccagggtt tccgctgggc tcagtgcgtt cagcgttgtt
      421 ggtgagcacc agatatacct taccagtggt cgggcttacc tcaatatcct cagggcggtc
      481 catcttggtg gccccaagta gatcggctgc cccccgcgta ttgaccagga cttcggcctg
      541 gcttgggaag ccgttctttg ccgtgagtgg cccttttcca tagaccaggg gcagccactc
      601 gccggtcccg tcgggcttga acctggcgac ataaagcgtg ccttcatcga gcagggccag
      661 gttgtgaggc cggtcccaag gctcgaacat tccccgggta atgaacttat agacatattc
      721 aaaacgccca tcgtcgccca agtacaccgc tatccggcca tcgcgcgtga gcacggagac
      781 cgccccctcg tgtttgaagc gaccgagtgc tgtgcgcttc ttgggcgtga agccgggatc
      841 gtaagggtcg atctcaacga cataaccgaa gcgggcatac tcattcggtt cttgggtggc
      901 atcgaagcgc gcatcgaatc gctcccattt gcgctctgtt tggccatcct cggggctgag
      961 ccgctcgtac agggcggctt tggccgggtc cctagctttg agggcggcga agttgccgaa
     1021 gtattgatcg aagttctcct cgcaactgag tgctgttccc cacggagtct taccacccgc
     1081 acagttattc agcatcccaa gcacctgcct cccgtttg
//
LOCUS       DASQSL010002128         1148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_175530, whole genome shotgun sequence.
ACCESSION   DASQSL010002128 DASQSL010000000
VERSION     DASQSL010002128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175530"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            188..487
                     /locus_tag="VE844_21380"
     CDS             188..487
                     /locus_tag="VE844_21380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03794.1"
                     /translation="MVFAPLQLVDLHQRNILTHENRPSRFVHTTADGAATRCPDRATG
                     NKVLKTFSQRVPCRLTGSSDPVERGNNLVTARRQKRKRYAFLSQECRLICRFLQI"
     gene            496..744
                     /locus_tag="VE844_21385"
     CDS             496..744
                     /locus_tag="VE844_21385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015051465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system protein"
                     /protein_id="HZC03795.1"
                     /translation="MTTTTIRVSTRTRDLLHELAHTAGVPMQQVLEQALEQYRRQQIL
                     HAANAAYAALLADPSARTELEKERAAWDVTLADGLEET"
     gene            745..1092
                     /locus_tag="VE844_21390"
     CDS             745..1092
                     /locus_tag="VE844_21390"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HZC03796.1"
                     /translation="MPPLPNRGEIWLADLNPTRGHEQAGARPVLIISTDPFNHGPAGL
                     VFVLPLTRTDRRIPIHVLIDPPEGGMSGRSFILCDALRSIAKDRLGPGAWGRVSPATL
                     QKVEDNLRILMEL"
BASE COUNT          259 a          325 c          317 g          247 t
ORIGIN      
        1 tcagatgctc ctcggcattg cgacaacgga tgcgctgcca aagctgccgt gccgaaatat
       61 cggcatcagt gcggtttcaa aataggtatg ggtcaaatcg tagagaagca cctcaaaacc
      121 cacttcgaac agtgcctgcc accgttgcct gaggtacgaa aataggccct ccttatcgga
      181 caacagcttg gtctttgcac cgctacagct ggtcgatctg caccagcgca acatcctcac
      241 ccacgagaat cgcccatcgc gctttgttca taccacggcc gatggagccg ccactcgctg
      301 cccggatcga gcaaccggta acaaggtctt aaagacattc agccagcgcg tcccttgccg
      361 acttacgggt tcaagcgatc cggtcgagcg cggcaataac ttggtgacgg ctcgacggca
      421 gaagcgcaaa cgctatgcct tcttgtctca agaatgtaga ctgatatgta gatttctgca
      481 aatatgaggt gcgctatgac tactaccacc attcgggtct ctacccgtac ccgcgactta
      541 ctccacgaat tggcccacac cgccggtgtg cccatgcagc aggtcttgga acaggcgctc
      601 gaacagtatc gtcgtcagca gattttgcac gcggctaatg cggcgtatgc ggccctgctg
      661 gcggatccat cagcacggac cgagctggaa aaggaacgtg cggcgtggga tgtgaccctt
      721 gctgatggcc tggaggagac ataaatgcca ccattgccca accgggggga gatttggctg
      781 gccgacttaa atccgacccg tggccatgaa caagcggggg cgcgaccagt cctgatcatt
      841 tcgacggatc cctttaatca cggtcctgct ggtttagtgt ttgttcttcc gcttacccgg
      901 acggatcggc gtatccccat tcacgttctg attgacccgc cagaaggtgg gatgtcaggg
      961 cgaagtttca ttttgtgtga tgctctgcgg tcaattgcga aagaccgact ggggccagga
     1021 gcctggggca gggtctcacc cgctaccttg caaaaagtcg aagacaatct ccgcattttg
     1081 atggagctat agtcgttctg agggagcagc aattcccttc aggcggggcg agacagacga
     1141 cgaaattt
//
LOCUS       DASQSL010002129         1487 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_40321, whole genome shotgun sequence.
ACCESSION   DASQSL010002129 DASQSL010000000
VERSION     DASQSL010002129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1487)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1487)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1487
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40321"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            247..1332
                     /locus_tag="VE844_21395"
     CDS             247..1332
                     /locus_tag="VE844_21395"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC03797.1"
                     /translation="MSFTLQLSSFTRKQLYRRLQVAYAGGSLKLVKRIHALLALAQGQ
                     SVRDVAEMVALGEQTVRDYRNQFLVQGVASLVYHSPPGRPSKLTKTQRQKLAEWIKAG
                     PQAAGYMSGCWNSPMIQDLIQREFGVEYHPHYICTLLKNMGFSYQKARFVSDHLNEAK
                     RLEWRQTEWPRILRDARRRKALLLFGDEASFAQWGSLSYTWALKGHQPEVPTSGKRKA
                     YKVFGLIDYFSGKFFYKAHAGRFNSESDAAFLLDVLSQTTQHVIVIQDGARYHTSQAM
                     KAFFKVHEARLTIEQLPAYSPDFNPIEHLWKKVKKEATHLKHFPEFTDLQQEVDRALL
                     HFGQTPAEITPLMARYCEKLGQVDKAA"
BASE COUNT          329 a          412 c          432 g          314 t
ORIGIN      
        1 tcccgccgag gggtcggcgc ggtcctgctt gcactcgccg aaacctccat acggggctcc
       61 ggctacacga ctgcgcgtct cgagtccagc cagaacgcgc tcgacttctg cctccgtagg
      121 ggctatagac gttccgaaaa agattcgtga gtcttcagga cgaaagggac tagacaaatg
      181 acgagagata cggcattcct agcggaactg atcaaaactt gtttctctcc gcaggaggta
      241 tctctcgtgt cctttacctt acagctcagc tcgttcaccc gcaagcaact ctatcgccgg
      301 ctccaagtgg cctacgccgg cggttccttg aaattagtca aacgcatcca tgctctgctg
      361 gcgttggctc aaggtcaaag cgtccgcgac gtggcggaga tggtggcgct cggtgagcaa
      421 accgttcgcg attaccgaaa tcagttcctc gtccagggag tggcgagttt ggtgtaccac
      481 tctcctcctg ggcggcccag caaactgacc aagacccaac gccagaagct ggccgagtgg
      541 atcaaggccg gtccccaagc tgccggctat atgtcgggat gttggaatag tcccatgatt
      601 caagacctca tccagcgcga gtttggcgtc gagtaccatc ctcactacat ctgtaccttg
      661 ctcaaaaata tgggcttttc ctatcagaaa gctcgctttg tctcggatca tttgaatgaa
      721 gccaaacgtc tggagtggcg acagaccgag tggccccgca tcttacggga tgcccgacgg
      781 cgcaaggccc tgctgctctt tggcgatgaa gccagttttg cccagtgggg ctcgttgagc
      841 tacacgtggg ccctcaaagg tcatcaaccg gaggtgccca ccagcggcaa acgcaaggcg
      901 tacaaggtct ttgggctcat tgactatttc tccgggaagt ttttctacaa ggcccacgcg
      961 gggcgtttca actcagagag tgatgcggcc tttttacttg atgtcctgtc tcaaacgacg
     1021 cagcatgtga tcgtgattca agatggcgcg cggtatcaca cgagccaggc gatgaaagcg
     1081 tttttcaagg tgcacgaggc ccgcttgacg attgaacagc tgccggccta ctcgccggac
     1141 ttcaacccga ttgagcactt gtggaagaaa gtgaaaaagg aggccacgca tctcaaacat
     1201 ttccccgagt tcacggactt acagcaggaa gtggaccggg cgttgctgca ttttggccaa
     1261 acgccggccg aaatcacgcc actgatggcc cgatactgtg agaagctcgg gcaagtggac
     1321 aaggcggcat agaagcttca cgaaacattt tctgaatgtc tatagcatgc cttctctgcg
     1381 tcatgcacca gttcgagggg ttgtgcaaaa atccccagga tgggataggg tagggccagc
     1441 aggggtggcc tggggcgacg gccgcgggac gggcggtgga gggaggg
//
LOCUS       DASQSL010002130         1454 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_203332, whole genome shotgun sequence.
ACCESSION   DASQSL010002130 DASQSL010000000
VERSION     DASQSL010002130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1454)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1454)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1454
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203332"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(153..293)
                     /locus_tag="VE844_21400"
     CDS             complement(153..293)
                     /locus_tag="VE844_21400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03798.1"
                     /translation="MASLFEQALRFTTLREAWQRFWENQGCAGSDGETLAAFEGNLQD
                     NL"
     gene            complement(342..>1454)
                     /locus_tag="VE844_21405"
     CDS             complement(342..>1454)
                     /locus_tag="VE844_21405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020563940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HZC03799.1"
                     /translation="AGIVLGPSLLGWISPTEVIKLLAEIGIILLLFEVGLETDVRQLA
                     RTGTQSLIVATGGFVLPFLLGYGLSRWVLELDILPSLFVGGTLTATSIGITVRVLSDL
                     KRQASHEGQIVLGAAVLDDVLGVVLLALLYEFATGGGISLANAVEVILFIALFFALAT
                     PAAKLLSLVIHRFDSVSEIPGLLPTTIVALVLFFAWLAHAVGAPALLGGFAAGLALSR
                     WFSLPFGLTILTDADFAHRVEGQMKPIIHLFTPIFFVMIGLSLNLREIDWESPFIWLF
                     SLSLVVIAVIGKVAGAMLIRDSWHARLAIGMAMVPRGEVGLIFAELGRVSGIFDNEIY
                     AGMVIVIALTTLLPPFAMKWFYGQYGHWLPVEATKA"
BASE COUNT          377 a          436 c          399 g          242 t
ORIGIN      
        1 gataccagcg gacgcaaagc aggatgatct cagcttcaaa gtgacgccag ttgaacggat
       61 tacgttgact tatagggtga tgatatggat accaatgacg gcgaaggacc gccttgatac
      121 cagattacca ataggatttg caacacatcc ccttagagat tgtcttgcag attgccttcg
      181 aacgccgcta gagtttcacc gtcgctgcct gcacacccct ggttctccca aaaccgctgc
      241 caggcttcgc ggagtgtggt gaagcgaagg gcttgttcga agagggaggc catgagggaa
      301 gcccgtggat tccaagaccg ctcagcagat agcaagttca gtcaggcctt agttgcttcc
      361 accggcagcc agtgcccata ctgcccgtaa aaccacttca tagcgaatgg tggcaataac
      421 gtggtgaggg cgatgacgat caccatgcct gcatagatct cgttgtcaaa gataccgctg
      481 accctcccca gctccgcaaa gataagaccg acttcgccgc gcggcaccat cgccatgccg
      541 atggcaagcc gcgcatgcca ggaatcgcgg ataagcatag ccccggctac ctttccgatg
      601 actgcgataa ccaccagaga cagcgaaaac aaccagataa atggcgactc ccagtcaatc
      661 tcgcgcagat taagtgagag cccgatcatg acaaaaaaga taggagtgaa cagatggatg
      721 atcggtttca tctggccctc tacccgatga gcaaagtcgg catcggtgag gattgtgaga
      781 ccgaagggca gggaaaacca ccgtgacagc gccagtcccg cggcaaaccc gcccagcagt
      841 gccggcgcgc ccaccgcatg cgcaagccag gcaaagaaca gcaccagagc cacaatggtg
      901 gtcgggagga gtcccgggat ctcgctcaca ctgtcaaagc ggtggatgac aagcgacagc
      961 agcttggccg ccggtgttgc cagggcgaag aatagcgcga tgaagaggat gacctcgacc
     1021 gcattagcaa ggctgatgcc cccaccagtg gcaaactcat aaagcagcgc caggagcacc
     1081 acccccaaaa catcgtccag taccgcggca cccaatacaa tctgaccctc atgactggcc
     1141 tggcgcttga ggtccgagag cacgcgtaca gtgatcccga tgctcgtggc tgtcaacgta
     1201 ccccccacga acagagaggg caatatgtcc agttctagca cccagcggct caacccgtaa
     1261 cccagcaaga aaggcagcac gaacccgccc gtcgccacga tcagggactg ggtcccggtg
     1321 cgtgcgagct ggcgcacgtc agtttcaaga cccacttcga acagcagtag tatgatgccg
     1381 atctccgcca acagcttgat aacctcagtt gggctgatcc agccgagcag gctgggccca
     1441 agcacgatgc ccgc
//
LOCUS       DASQSL010002131         1267 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_40340, whole genome shotgun sequence.
ACCESSION   DASQSL010002131 DASQSL010000000
VERSION     DASQSL010002131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1267
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40340"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1076
                     /locus_tag="VE844_21410"
     CDS             <1..1076
                     /locus_tag="VE844_21410"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HZC03800.1"
                     /translation="DPQNNAQRLGTLLGKVLRIDVEGGPPYALPADNPFVGNPEARGE
                     IWAWGLRNPWRFSFDPLKGHLFIADVGQGEREEINFQPAGSPGGENYGWRRMEGTQCF
                     NPSTDCNNGTLILPVIEYEHELGCSVTGGYRYRGTQLPHHYGTYFYGDFCSGRIWGAR
                     RDGQGRWVSTELLNPPAFMISTFGESEKRELFVADYASGTIYRLVTRNDGPLIIANET
                     LTDPNGGTLEPGDEIRFRVVLRNLGNTDQADNSAREFWGGFNHNKLELLHVGVSSGQV
                     KVMPRDNPIRWNGVISAQGQMRITLRARIRSGVSGKVCNRGLAYYDADLNGSNETEVP
                     TDDPKTPIRWDPTCAEIGQNLAP"
BASE COUNT          290 a          315 c          371 g          291 t
ORIGIN      
        1 gtgatccgca aaataatgcc cagcgtctgg ggacgctgct tggaaaggtg ctgcgtatcg
       61 atgtagaggg tggccctccc tacgccctcc ccgctgataa cccttttgtg ggaaatcctg
      121 aagcccgggg tgagatctgg gcctggggcc tgcgtaatcc ctggcgattt agcttcgatc
      181 cgcttaaggg ccacctattt atcgccgatg tcgggcaagg cgagcgggag gagataaact
      241 tccagcctgc cggcagtcca ggcggggaaa attacggttg gcggcggatg gaagggacac
      301 agtgcttcaa tccgtctacc gattgcaata atggaacgct gatcctgcca gtcatcgaat
      361 atgaacatga gttggggtgc tcggtcacgg gggggtatcg gtatcgtggt acccaactcc
      421 cgcatcatta cggcacctat ttttatggtg acttctgctc agggcggatc tggggagcga
      481 ggcgggacgg acaggggcgg tgggtgtcta ctgagcttct gaatccccca gcgtttatga
      541 tcagcacctt tggtgagagc gagaagcggg aactctttgt ggctgactat gcctcgggca
      601 cgatctatcg cctggttacc aggaatgacg gccctctgat catcgctaat gaaacgttaa
      661 cggatccaaa tggcggaacc ctggagcccg gagatgagat aagatttaga gtggtactgc
      721 gcaatctcgg caacaccgac caagccgata attctgcacg agaattttgg ggagggttta
      781 atcataataa gctcgaattg cttcacgttg gggtctcttc gggacaggtg aaggttatgc
      841 ccagggacaa tcctatacgc tggaacgggg tgatctccgc ccaaggccag atgaggatca
      901 cgctccgtgc ccggataagg tcgggcgtga gcggaaaggt gtgtaacaga ggcttggctt
      961 attatgacgc tgatctcaat ggaagtaacg agaccgaggt ccctaccgat gatcccaaaa
     1021 cccccatcag gtgggatccg acctgtgccg aaattggtca aaatcttgcg ccttgatgcc
     1081 tcctcagtag gtaatacaca ctcaatcaag tgactcttta gaacctatct ctaaacctcc
     1141 ccagacccgc atacataaag gggagaatcg aggtttaggg ataggttctt aatctctgtc
     1201 ttgattttgt tttcaaatgc ccgctgttct tcatgcctcg ccgaatcaaa agccgggctc
     1261 ggcgggg
//
LOCUS       DASQSL010002132         1331 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_175557, whole genome shotgun sequence.
ACCESSION   DASQSL010002132 DASQSL010000000
VERSION     DASQSL010002132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1331
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175557"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(124..687)
                     /locus_tag="VE844_21415"
     CDS             complement(124..687)
                     /locus_tag="VE844_21415"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC03801.1"
                     /translation="MAPNQKKARRQQAEIMFVDETGFSFRAKTGTTWAPIGRTPVLRR
                     VSKRRALSTVIGLTLSGRIYKRHFAHAICGDDMVLTLRHFQRHIPGPLIIIWDRLNAH
                     RATVVKEYLGVRPEIEVHWLPPYAPDLNPEEGCHGNVKQHLRNAVPTSVSDLRGGVNR
                     GFARLRRRPDLILGFFHHAGLHVNQLW"
     gene            complement(633..977)
                     /locus_tag="VE844_21420"
     CDS             complement(633..977)
                     /locus_tag="VE844_21420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HZC03802.1"
                     /translation="MASLRTRPIPGRPARLNVEQWERVLAVLKEGALKAGFDTDRWTL
                     LRIRAVILVAFGVRYHAHYLARRLKALGWSAQQPAVYARERDDALVRAWLTHDWPRIK
                     KRLAANRRRSCS"
     gene            complement(1053..>1331)
                     /locus_tag="VE844_21425"
     CDS             complement(1053..>1331)
                     /locus_tag="VE844_21425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016862808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HZC03803.1"
                     /translation="TDEVLLQLKALLEPFGIRRFHTDYWGAYARHLGPEVHHPGKRNT
                     QQIERKHLTLRTRIKRLARKTICFSKSTQMHDIVIGLFVNRYEFGLPV"
BASE COUNT          288 a          369 c          404 g          270 t
ORIGIN      
        1 tgattaagta tattcggggg cttcccagag acaagaggca tttgctcgca attacctgtc
       61 gtggcaatga accatgggaa atcgaggaac atatcacaaa acagaagatt gacttattga
      121 gcttcaccaa agttggttga catgcagtcc ggcatggtgg aagaatccga ggatgaggtc
      181 gggtcgccgg cggaggcgag caaagccgcg attaacacct ccgcggaggt cgctgacgct
      241 tgtggggaca gcgttgcgaa ggtgctgttt gacgttgcca tggcacccct cctcggggtt
      301 cagatcgggg gcatagggcg gcagccagtg cacctcgatc tcaggacgca cacccaaata
      361 ctccttgacc accgtggcgc gatgggcatt gagtcggtcc cagataatga tgagggggcc
      421 gggaatgtgg cgctggaagt ggcggagggt gagcaccata tcatcgccgc agatggcatg
      481 cgcgaagtgt cgcttgtaga tacggccaga cagggtcaac ccgatcaccg tggagagtgc
      541 acggcgcttg ctgacgcgtc gcaggacagg tgtccgccct ataggagccc acgtggttcc
      601 cgttttggcc cggaaggaaa agccggtctc atctacgaac atgatctccg cctgttggcg
      661 gcgagccttt ttttgattcg gggccaatca tgcgtgagcc aagcccgcac cagggcatca
      721 tcccgttccc gagcatagac agctggctgc tgcgcactcc atcccagcgc cttcagccgc
      781 cgggccagat aatgagcatg gtagcgcaca ccaaacgcca ccagaatcac cgcacggatg
      841 cgcaggagcg tccaccgatc cgtgtcaaaa ccagccttga gagcgccttc tttgaggacc
      901 gccagcacgc gctcccactg ctcaacgttc aggcgggcgg gacggccggg gataggccgt
      961 gtgcgcaagc tggccatgtc gccctgatgc tgacggagtt gttgagccca cttgctgaca
     1021 gcggtggtgt tttagatctg gacatcatgg tttcaaacag gcaggccaaa ttcatagcga
     1081 ttgacaaaca agccaatgac gatgtcgtgc atctgggtgg atttcgaaaa gcagatggtc
     1141 ttgcgtgcca aacgcttgat gcgtgtgcgc aacgtcagat gcttccgttc aatttgctgc
     1201 gtgttccgtt tgccgggatg gtggacttcc ggccccagat ggcgcgcgta cgccccccag
     1261 taatctgtgt gaaatcgcct gattccaaac ggctccagca gtgccttcaa ctgcagcaat
     1321 acctcatctg t
//
LOCUS       DASQSL010002133         1888 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_175563, whole genome shotgun sequence.
ACCESSION   DASQSL010002133 DASQSL010000000
VERSION     DASQSL010002133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1888)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1888)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1888
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175563"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..432
                     /locus_tag="VE844_21430"
     CDS             <1..432
                     /locus_tag="VE844_21430"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HZC03804.1"
                     /translation="SETVLLVEDEEEVRSAVGESLQMRGYSVLRARHGREALMICRRH
                     EGPIHLLLTDVVMPQMTGPELAQRISLLRPEIKVLYVSGYTSDALAQHNMIAPGTAFL
                     QESFNQVVMPIARTLLDSPLRTDMFMSEREDGNACMSPVPE"
     gene            404..1105
                     /locus_tag="VE844_21435"
     CDS             404..1105
                     /locus_tag="VE844_21435"
                     /inference="COORDINATES: protein motif:HMM:NF033558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HZC03805.1"
                     /translation="MRVCPQCQSDRLVNNGAAAGKPKKLCQPCGSQFTRIIPRGKPLT
                     TKINAVLLYLSGISMPRMAFLLRVSAQAVLSWIRTFAQKYQEKPEPAGRSLILELDEM
                     WHDVQKKRQKLWIWKALDQDTGQLLDWECGRRDKATLKKMVDRLASGDVKVYCTDQWG
                     TYASVIPQDKLVQSKTTTHDIERHHCRQRHWFGRFTRQSIIVSKSTEMVDLTMALFAR
                     FWVNGNQDELLSLLG"
     gene            1566..>1888
                     /locus_tag="VE844_21440"
     CDS             1566..>1888
                     /locus_tag="VE844_21440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03806.1"
                     /translation="MGKPKLLRASAVRWSIGVLLFSAALFSSLGWAQMGSNIPPDEAL
                     QAQRAREIAREFVVAEPSPDTVLRPVQRVPRERFGVVGPLPLQLSDLDALVYPDATSE
                     EREALL"
BASE COUNT          399 a          539 c          546 g          404 t
ORIGIN      
        1 tcagagaccg tgttgctggt cgaagatgaa gaggaggtgc gttcggccgt gggcgagagc
       61 ctccagatgc gcggttacag tgtcttgagg gctcgccatg ggagggaagc cttgatgatc
      121 tgtcggcgac acgaggggcc gatccacctg ttgttaaccg acgtcgtgat gccgcagatg
      181 acaggaccag agctcgccca gcgcatctct ttgctgcgcc cggagatcaa agtgctctac
      241 gtctccggct acaccagcga cgcgctggct caacacaata tgatcgcccc gggcacggct
      301 tttctgcagg agagtttcaa ccaagtagtg atgcctattg ctcgcaccct gttagactcc
      361 cccctccgga cagatatgtt tatgtctgag agggaggatg gcaatgcgtg tatgtcccca
      421 gtgccagagt gatcggctcg tcaacaacgg tgccgccgcc ggcaagccca agaagctttg
      481 tcagccgtgc gggtctcagt ttacccgtat catcccacgc ggtaagcccc tcacaacgaa
      541 gatcaacgct gtactgctct acctgagtgg catttccatg cctcgcatgg cgttcctcct
      601 gcgcgtctcc gcccaggcgg tgctcagctg gatccgaacc tttgcccaga agtaccaaga
      661 gaagccagag cccgcgggga gaagcctcat tctcgaactg gatgagatgt ggcatgacgt
      721 gcagaagaaa cggcagaaac tctggatctg gaaggccttg gatcaggaca cggggcaact
      781 gctggactgg gaatgtgggc gccgtgacaa ggccaccttg aagaagatgg tcgaccgcct
      841 ggcctcaggg gacgtgaaag tgtactgcac ggaccagtgg ggcacgtatg cgtcagtcat
      901 cccgcaggat aagctggtgc agagcaaaac gacgacccat gacattgaac gccatcattg
      961 ccgacagcga cattggtttg gccgattcac acgccagtcc atcatcgtct ccaaatccac
     1021 agagatggtc gatctcacga tggccctgtt tgccaggttc tgggtcaatg gtaaccagga
     1081 tgaactccta tcactacttg gttgaaaccc tctaattttt ttcttgacgc atttaaatta
     1141 ttaagataac tttgcgacta actcaaattt tcgatgcaaa aggtatcttg tcctttccaa
     1201 aatcttgcat gatcgatcaa agcaaggcca cttctgtgta aagcgtccgg ctgatcacgt
     1261 tcagtcaggc ctcacaaggc cttgatacga atcaccggct cgcggctttg caaccacagc
     1321 tcatactctt tgctcagccg ccgatagcgg ttgcgctacc cccgaccgtt ttcgcacaag
     1381 atcctagcgc ctgatgtgcg tccacacgcc gtcgagaggg agatcgcgct tgacctccgc
     1441 gcgtacgcgc agggcttgtt gggagcaggc gtgctggaga cacctgctgc attacagagc
     1501 gttgagctca gggcctgcgt cacggctgca ctcggcatgg gtcgtcatag tatgggagga
     1561 aagtgatggg caagccgaag ctgttgaggg cctcagcagt tcgttggtca atcggcgtgt
     1621 tgctgttctc ggctgccctc ttctcaagcc tcggatgggc acagatgggc tccaacatcc
     1681 ctcctgatga ggccttacag gcgcaacggg cacgcgaaat tgccagagag ttcgtggtgg
     1741 cggagccatc gcccgacacc gtcttgcggc ccgtgcagcg tgtcccacgc gagcggttcg
     1801 gagtcgtcgg ccccttgccg ctccagctaa gcgatctcga cgcactggtc tatcctgatg
     1861 ccacgagtga ggagcgcgag gcgttgct
//
LOCUS       DASQSL010002134         1330 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_203367, whole genome shotgun sequence.
ACCESSION   DASQSL010002134 DASQSL010000000
VERSION     DASQSL010002134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1330
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203367"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..255)
                     /locus_tag="VE844_21445"
     CDS             complement(<1..255)
                     /locus_tag="VE844_21445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03807.1"
                     /translation="MPDDQLALFHPKKYKDVTAQRTPITPPAGDHTVLQTLPAYHAYL
                     RSGDYSKYTPDDFTSDVKKFGLFLKEKKVSEIRPIDIHQWI"
     gene            complement(279..827)
                     /locus_tag="VE844_21450"
     CDS             complement(279..827)
                     /locus_tag="VE844_21450"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC03808.1"
                     /translation="MYQQRITALDLRRLKFVDESGVNLAMTRVYGRAPTGERVIGNVP
                     QNYGQNVTMLGALGVQGLHAVMTVDGATDTDVFRTYVKQVLGPTLTPGDIVVMDNLRA
                     HKAAGGQQAMARRGARLLYLPPYSPDLSPIEPCWSKVKTVLRKAQARTREALDMAITG
                     ALGTITDADAQGWFRHCGYALR"
     gene            complement(785..1228)
                     /locus_tag="VE844_21455"
     CDS             complement(785..1228)
                     /locus_tag="VE844_21455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03809.1"
                     /translation="MAAYSIDLRQKILRAYERQLGSQRTMADVFGVSLAFVEKVLRQH
                     RTTGDIAPKPHAGGQKPRLDAAAQAVVQRFVGDNPDATLVELCTRVAAAIGVRVSVPT
                     MCRVLQRVGLPRKKSRSTRRNARPRASNRRERSTSSGSRRSTSGA"
BASE COUNT          264 a          385 c          394 g          287 t
ORIGIN      
        1 tatccattgg tgtatatcaa taggacggat ctcactgact ttcttctctt tgagaaacag
       61 cccgaatttc ttcacatcac tggtaaaatc atcgggcgtg tatttggagt agtccccgct
      121 tcgcagatag gcatggtatg caggaagggt ttgtagcacg gtgtgatcgc cggcaggcgg
      181 tgtgattggc gttcgctgcg cagtgacatc tttatatttt ttgggatgaa ataaggcgag
      241 ttgatcgtct ggcatgcaag cctagagcgg ttttcgcatt atcgtaaggc atagccgcaa
      301 tgccgaaacc aaccttgtgc atcagcgtct gtgatggttc ccagggctcc tgtgatggcc
      361 atgtcgaggg cctcacgcgt gcgcgcctgc gctttgcgca gaaccgtctt caccttggac
      421 caacacggct caatgggcga caggtccggc gagtagggcg gcaagtacag cagacgagcg
      481 ccgcgtctgg ccatggcctg ctgacccccc gcggctttgt gcgcccgcag attgtccatc
      541 acgacaatgt cgcccggagt cagtgtagga cccagcacct gcttaacgta ggtccgaaag
      601 acatccgtgt cggtcgcacc atcaacggtc atcaccgcgt gcaggccttg gacgcccaaa
      661 gctcccagca tggtgacatt ctggccgtag ttctggggca cgttcccgat gacccgctcc
      721 ccggtggggg cacggccata gacacgcgtc atcgccaggt tcacgcccga ttcatccacg
      781 aacttcaagc gccggaggtc gagcgccgtg atccgctgct ggtagatcgc tcgcgccggt
      841 tggacgcgcg gggtctcgcg ttccgacgcg tggagcgact ttttttgcgc ggtagaccca
      901 cgcgctgcag cacgcggcac atcgtcggca cactgacccg gacgcctatt gcagcggcta
      961 cgcgggtgca cagctccacc agggtcgcat ccggattgtc ccctacgaac cgctgcacga
     1021 ccgcctgggc agcggcgtcc aggcgaggtt tctgaccacc cgcatggggc tttggagcaa
     1081 tgtcgccagt ggtacggtgt tggcgtaaca ctttctcgac gaaggcaaga ctcacgccga
     1141 acacatcggc catggtgcgt tgcgagccga gttgccgctc ataggcacgc aggatcttct
     1201 gacgtaaatc aatcgaatag gcagccatac gagctatgct aagaagagtt tctcttacga
     1261 tcaagtgaaa accgctctag gtagtattgt gcgcgctgct ggctatatcg tgaatgatca
     1321 tacggcgcag
//
LOCUS       DASQSL010002135         1966 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_121484, whole genome shotgun sequence.
ACCESSION   DASQSL010002135 DASQSL010000000
VERSION     DASQSL010002135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1966)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1966)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1966
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121484"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..343
                     /locus_tag="VE844_21460"
     CDS             <1..343
                     /locus_tag="VE844_21460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03810.1"
                     /translation="RVVADNESLSLIRGGFEEEMRTLEWSKDWAMKQGITGLRCISRD
                     LQDPQAEAMLRQYHDNIIELRLGDAGRELRIMKMFATEHPVDWMPFEITREGLQLKRK
                     QMSPMGYAQYR"
     gene            387..1730
                     /gene="thiD"
                     /locus_tag="VE844_21465"
     CDS             387..1730
                     /gene="thiD"
                     /locus_tag="VE844_21465"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HZC03811.1"
                     /translation="MPIALTIAGSDSGGGAGIQADLKTFAALGVYGATVITSVTAQNT
                     LEVTGIHDLPAEFVVLQLDTVVRDLPVDAIKTGMLSNPAIIRAVSERLNALGIRRLVV
                     DPVMVAKGGAALLRKEAEAELIQGLLPLAFVVTPNLGEAEVLAAMPIRGLSDMEQAAR
                     RIYEKGPRNVVVKGGHLEGPPVDLLFDGHTFQYFEGERIDTKSLHGTGCTFASAIAAE
                     LAKGAEVVDAVRGAKAFITEAIRLAEPIGHGFGPTHHLGALYTQAARYAVLLRLEEAM
                     ARLQEGRVAALIPQGQSNLGMALPHAATPQEVAAWVGQIVRAGVDVCPMGGLRFGASP
                     HIAAVILTAMRSDPVYRSAMTIRYGQDVLQACQNSNLRIAQFARQEAPSEVRQGESLT
                     LAWGVAGAIQQMGAVPDIICDLGDVHQEAMVQVLGRDAVDVASKVLLIHHHFSPQ"
BASE COUNT          399 a          535 c          623 g          409 t
ORIGIN      
        1 tcgggtggta gcagataacg aatcgctcag cctgatccgc gggggatttg aggaagaaat
       61 gcgcaccctg gaatggtcca aagactgggc catgaagcag ggcatcaccg ggctgcgttg
      121 tatcagtcgc gacctacaag acccgcaggc cgaggcgatg ctgcgccagt accacgacaa
      181 tatcatcgag cttcgtctcg gcgacgctgg ccgcgagctg cgcatcatga agatgtttgc
      241 cacggaacac ccggtcgatt ggatgccatt tgagatcacg cgcgaagggt tgcagctcaa
      301 gcgcaagcag atgagcccca tgggttatgc ccaataccgc taacgagagg ccgacttgtg
      361 agccagccag tggtggaaga atggcgatgc ccatagcctt aacgatcgcc ggctccgatt
      421 ctgggggggg cgcgggcatt caggcagacc tcaagacttt tgcggcgctc ggcgtctatg
      481 gggcaacggt tattacctct gtgacggcgc agaataccct ggaggtgaca ggcatccatg
      541 acctcccggc ggagttcgtg gtgctgcagc tcgacacggt cgtgcgcgat ctgccggttg
      601 atgccatcaa gaccggaatg ttatccaatc cggccattat ccgtgcggtg agtgagcgac
      661 tgaacgctct cggtatccga aggcttgtgg tcgatccagt catggtcgcg aagggcggag
      721 ccgcgctgct tcgtaaagag gcagaggccg agctgatcca ggggttatta cccttggcct
      781 ttgtggtaac tccgaattta ggcgaggctg aggtcttggc tgcgatgccg atccgagggc
      841 tcagcgacat ggaacaagcg gcacgccgca tttatgagaa ggggccacgg aacgtggtcg
      901 tcaaaggagg gcatctcgag gggccgccgg ttgatctctt gttcgacggc cacacgtttc
      961 agtattttga aggggaacgt atcgacacca agagtctgca cggcaccggc tgtacgttcg
     1021 cctcagccat cgcggccgag ctcgccaagg gtgctgaggt ggtagacgcg gttcgcggcg
     1081 cgaaagcctt tattactgag gcgattcgtc tggccgagcc gatcggccac ggatttggcc
     1141 caacacacca cctcggggcg ctctacactc aagcggcgcg ctatgccgtc ctcctgcggt
     1201 tagaggaggc catggctcga ctgcaggaag ggagggtcgc cgcgctgatt ccacaggggc
     1261 aatcaaatct aggaatggcg ctccctcacg ccgccacacc gcaggaagtg gcggcatggg
     1321 tcggtcaaat cgtgcgggcc ggtgtggatg tctgtccgat ggggggtctt cgattcggcg
     1381 cctctccgca catagcggcg gtcattctca ccgccatgcg cagcgatccc gtgtaccgca
     1441 gtgcgatgac tattcgctat ggtcaggatg tcctgcaggc ctgccagaac tcgaaccttc
     1501 gcatcgccca gtttgcacgt caggaggcgc cgagcgaagt ccggcagggc gagagtctca
     1561 ctctggcctg gggcgtggcc ggggcgattc agcagatggg cgccgtgcct gatatcatct
     1621 gtgaccttgg cgacgtgcat caagaggcga tggtacaggt cttagggcgt gatgcagtgg
     1681 atgtcgcgag caaagttctc ctgattcatc atcatttctc gcctcaataa gagccgaaag
     1741 ccgtagtatt ccttcatctt cccccccgcc gtgcattgtg tatccagcat gtgcctcagc
     1801 tagtgatatt atgggcgtta atacatacat aataaaccaa ataaagggtt tcaaagaagg
     1861 gagtgtgcat attgggcggc tatgagaagc atgagcgcga tatcttcgac atcactattc
     1921 tggggggagg ccctgtcggt ttatttggcc tcttctatgc tggtct
//
LOCUS       DASQSL010002136         1046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_175580, whole genome shotgun sequence.
ACCESSION   DASQSL010002136 DASQSL010000000
VERSION     DASQSL010002136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175580"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            326..889
                     /locus_tag="VE844_21470"
     CDS             326..889
                     /locus_tag="VE844_21470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004164081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZC03812.1"
                     /translation="MYIGYARVSTHDQHLDLQQDALTQVGCKKITVDRVSGTVADRPG
                     LATVKELLRAGDTLVVWRLDRLGRSIKDLIAWVSWLEHEGIGLKSLHEVIDTTSTGGK
                     LTFHIVAALAAFERQLILERTPAGRQAARARGRVGGRPKALTASQQTRAVALYQKKRL
                     AVQEICTMMGISKPTLYANVRQAHSSS"
BASE COUNT          234 a          292 c          296 g          224 t
ORIGIN      
        1 catcttcaga attgtctgtc ctgactttcg gaattatgtg tcatctccct ggtatatccg
       61 cgctgcgtaa agaaattcga taaaagtcag gcattccttt ccgttgactt cctaccaagt
      121 ttcttgcccg aaattcggac cctgagaggt acgattcgct tctcgctgta gacaggtaaa
      181 aatacgagag ttttcttttc ctgtcgtctc tcttcccatt ttcggttgcg tgtgagccca
      241 gattggggta gtaaacgcag taggaaaaca acgttaagat gcacttggtt cccaatgagt
      301 tatttccctt tgtgtcaggg ccactatgta catcggatac gcacgagtct ccacccatga
      361 tcagcacctc gacctccagc aagatgcctt gacgcaggtc ggttgcaaaa agatcactgt
      421 cgaccgggtc agcggtacgg tggcggaccg gccggggctg gccacggtca aggaactcct
      481 gcgggccggg gacacgctcg tcgtgtggcg gctggatcgg ttagggcggt ccatcaagga
      541 tttgatcgcg tgggtcagct ggctcgagca cgaaggaatc ggcctaaaga gtctgcacga
      601 agtgattgat accacctcga cgggtggcaa gctgacgttc catattgttg cggcactggc
      661 agcatttgaa cggcagctga tcctggaacg cacgccagcg ggacggcagg cggccagagc
      721 ccgaggccgc gtgggcggac gcccaaaagc gttgaccgcg agccaacaaa cgcgggcggt
      781 agcgctttac cagaagaagc ggttggctgt gcaggagatc tgcaccatga tgggcatctc
      841 gaagccgacc ctctatgcca atgtccgtca ggcacactcc tcctcctagc ccgacttcgc
      901 accttcccac atgaaaggga tcccgatgcc gaaaaagtca cgtgggcaaa aacggcaggc
      961 caagacgaag cagcgccaac aacgtcaagc cagacgatca tcaccgccgt ctctgtcatt
     1021 tctgggcggc atgccgttta gcggcg
//
LOCUS       DASQSL010002137         1468 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_203404, whole genome shotgun sequence.
ACCESSION   DASQSL010002137 DASQSL010000000
VERSION     DASQSL010002137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1468)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1468)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1468
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203404"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(603..1148)
                     /locus_tag="VE844_21475"
     CDS             complement(603..1148)
                     /locus_tag="VE844_21475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03813.1"
                     /translation="MKRIILLVTVAALLAAMLALAGVAWAKSTAQPVDPPKQVAQLRQ
                     KFEGLSTKQVKARGYVPEGPCVPNPKGPGAMGIHAINHKLLQAQFPKGKMDPENPPVL
                     LLGQKGKVMGLEWEAADVGQGPMKMFGQTIKLQPGHPGVPDPHYMLHIYFKPDGKVLF
                     GTNAKTAFDPKRSCRAGASSQ"
     gene            1282..>1468
                     /locus_tag="VE844_21480"
     CDS             1282..>1468
                     /locus_tag="VE844_21480"
                     /inference="COORDINATES: protein motif:HMM:NF024908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC03814.1"
                     /translation="MKAYSEDLRKKILQAVDRGMPKSLAARTFGVSRASVKRYAAARR
                     EGKPLGPKKHPGERPRSV"
BASE COUNT          290 a          449 c          441 g          288 t
ORIGIN      
        1 cgaggaggcg cggtgcatcc tcgcttatat gcaccaccca cgcttcagct ccggggagaa
       61 gcacggccct actggcgggg gtgttgagaa gctgtgggag gcgctctaca aggcggacac
      121 cgatgtgatc ctctcagccc acgagcacaa ctacgaacgc ttcgtgccgc aggactctga
      181 agggaacgcg gagccttcgc ggggcatccg ccagttcgtg gtgggcaccg gtggcggagg
      241 ggggaggggc cgatctcgga gcctatcgcc aacagcgagg tgcgcaccga tgccaccgac
      301 ggcgtcctca agctcaccct gcacccgaag agctacgagt gggagtatgt ccctgtagag
      361 ggtgagagct tcaccgactc cggtgatgcc cagtgccact gagcgcccag tcgagcagga
      421 caaaggactc ctctactgag tcataccgct ggtctttgga gactccaccc ccgaagtttt
      481 cgagaacgcc tctacgagcg aacttctgag aattcttgtt ccacgcactc cggtgaataa
      541 ggctgggtga gaggaggggg cgcaggctcc cctcccctcg gatgggctat gaggcctact
      601 agctactggc tacttgctcc ggcgcgacag ctacgctttg ggtcaaacgc tgttttggca
      661 ttcgtgccga acaacacctt gccgtcaggc ttgaagtaga tgtgcagcat gtagtgaggg
      721 tccggtacgc ctgggtgtcc cggctgaagc ttgatggtct gcccgaacat cttcatcggt
      781 ccctgcccta catctgcagc ctcccactcc agtcccatga ccttgccttt ctgaccgagc
      841 aagagtacgg gcgggttttc agggtccatc tttccttttg gaaactgagc ctgcaagagt
      901 ttgtggttta tagcgtgaat acccatagcc cctggaccct tagggttcgg aacgcacggg
      961 ccctcaggca cgtacccccg ggcctttacc tgttttgtgg aaagcccttc gaacttctgg
     1021 cgtagttgag caacctgctt gggtgggtcc accggctgag cggtgctctt ggcccaagcc
     1081 acccccgcaa gggcgagcat cgccgccaac agcgccgcca ccgtaaccaa caagatgatg
     1141 cgcttcataa gcgcaacctc cttatatacc gtgcggcagc cggttgcact actggctccc
     1201 cgtgccctac gtgcccacct gtaacggaac acggttctag agcgggttgc gatgtgattg
     1261 agccgagtgc atcatcggtg catgaaagcc tattctgaag acctcagaaa gaagatcctc
     1321 caagccgtag acagagggat gccaaagagc ctggccgcca ggaccttcgg ggtgagccgc
     1381 gcctctgtaa aacgctacgc ggccgctcgc cgggaaggta agcctctcgg cccgaagaag
     1441 catcccggcg agcggccgcg tagcgttt
//
LOCUS       DASQSL010002138         2095 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_203417, whole genome shotgun sequence.
ACCESSION   DASQSL010002138 DASQSL010000000
VERSION     DASQSL010002138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2095
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203417"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            339..>2095
                     /locus_tag="VE844_21485"
     CDS             339..>2095
                     /locus_tag="VE844_21485"
                     /inference="COORDINATES: protein motif:HMM:NF033559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC03815.1"
                     /translation="MYIRKATRNYKGKLYTNHLLVESIQTSKGPRQKVICSLGDLSPR
                     PREGWLKLAHKMEAALGGQTELFEVDQEMGSLLERARKQNHRPRRRDGTTPHPNNLDW
                     VTVETNRVEIEDPREAGPVHVGYAVWRRLGFDEVLAKAGFNPKTRALTCAMVLNRLVC
                     PRSEHAMPEWIRRTALEDILSVEFKTLTETALYRNLDRLHPERERIESALCERERTLF
                     NLDQTIYLYDLTSTYFEGQAVADPKAKHGYSRDKRPDCKQVVVGLVVNRDGFPQAHEV
                     FEGNRPDRTTLTAMLDLLDTRVGLKAGQTVVVDRGMAFDDNLAELKSRKLHYVVASRQ
                     SERDTWLAEFEDLGGFEEVLRRPSPRNPFQKKSQIKVKLKRGEEGSYVLCISSERKEK
                     DRAIREKQEARLQDALKKLEARVKQGRLVKPTKIGEAIGRLKERYPRVARYYEITHDT
                     QTKECTWILNQEKHHTAEQLDGSYLLKTDRTDLSAEDIWHIYSLLTRAEEAFRSMKSP
                     LAERPLFHQLERRVETPIFLCVLAYHLLVAIEKTLRDKGVHTSWGTVRDLLKTHQVAT
                     IALPADRGAVLRIRKGTVP"
BASE COUNT          507 a          566 c          598 g          424 t
ORIGIN      
        1 ttggataccg gcattatcga gtgaaggagg gttgctattt cttaccgtgg cattgataga
       61 gcggcgggga agcctactca ccgaaaacgt cgagggatta cgggccgctt tccgggggct
      121 caaataggca cacccatttg agatggaggc tagcccaact tcgtcactcc ccctgtgatt
      181 tttgcccaat tttgggggat tgaaggcagg tttcgaattg taagctacag atttttcagg
      241 aattgctctc acgcaagtgc aaaagatcgc taaaatagtg actaatagta cataatatat
      301 ccattgactt attagcctta ttgactacta tagtggctat gtatatccgc aaagccacgc
      361 gtaactacaa aggcaagctc tacaccaacc acctgctggt ggaatccatc cagacctcca
      421 aagggccacg gcagaaagtc atctgctcgc ttggcgacct ctcaccccgc ccccgtgaag
      481 ggtggctcaa actggcccat aagatggagg cggcgttagg ggggcaaacg gagctctttg
      541 aggtggacca agagatgggg agtctgcttg aacgggcacg caaacagaac caccgtccac
      601 gccgcaggga tggcaccacg cctcacccga acaacctgga ctgggtgact gtggagacta
      661 accgggtgga gatagaagac ccccgtgagg ccgggccggt ccatgtgggt tatgcagttt
      721 ggcggcgctt gggattcgat gaagtcctgg ccaaggcggg gttcaatccg aagacgcgcg
      781 cgcttacctg cgccatggtt ttaaaccgct tagtctgtcc gcgttccgaa catgccatgc
      841 cagaatggat tcgtcgcacc gctttggagg atatcctgag cgttgaattt aagaccctca
      901 ccgagaccgc gctgtaccgc aacctggacc gattgcatcc cgagcgggag aggattgaat
      961 cggcgctctg cgagcgggaa cggaccctct ttaacctgga tcaaacgatt tatctctatg
     1021 acttgacctc gacatatttt gagggccaag cagtggcgga tccaaaagcc aagcacggct
     1081 attcgcggga taaacgtccc gactgcaagc aagtggtggt ggggcttgtc gtcaaccgag
     1141 acggttttcc tcaggcccat gaggtcttcg aggggaatcg gccggatcga actacgctga
     1201 ccgccatgtt ggacctgctg gatacccggg tgggactcaa agcagggcag acggtggtcg
     1261 tggaccgggg gatggccttt gatgacaacc tggccgaact gaagtcgcgc aagttgcact
     1321 acgtggtggc tagccggcaa agcgaacgag acacgtggct agctgagttc gaggacctcg
     1381 gtggctttga ggaagtgctc cgtcggccct cgccgcgcaa cccctttcag aagaaatccc
     1441 aaattaaagt caagctgaag cgaggcgaag aagggagcta tgtgttatgc atcagctcgg
     1501 agcgtaaaga gaaggaccgc gccattcgcg aaaaacagga agcccgtttg caagatgccc
     1561 ttaaaaaact cgaagcacgg gtaaagcagg gccggctggt gaagccgacc aagatcgggg
     1621 aagccatcgg acggcttaaa gaacgctatc cacgcgtggc ccggtattac gagattaccc
     1681 atgacaccca gaccaaggaa tgcacctgga tacttaacca ggagaaacac cacaccgccg
     1741 aacaactcga cggaagttac ctcttgaaaa ccgaccgcac tgacctttca gctgaggaca
     1801 tttggcatat ctatagcctg ttgacccgcg ctgaggaggc ctttcggtcc atgaagagtc
     1861 ccctggccga gcgccccctc tttcatcaac tcgaacggcg ggtagagacc cccatctttc
     1921 tgtgtgtact cgcctaccat ctgttggtcg ctatcgaaaa gacccttcgg gataagggcg
     1981 ttcatacctc ttggggcacc gtgcgcgacc tgcttaaaac tcaccaagtc gcgaccatag
     2041 cgctacctgc tgatcggggt gccgtgttgc gcatccgtaa gggcaccgtg ccaga
//
LOCUS       DASQSL010002139         1991 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_40418, whole genome shotgun sequence.
ACCESSION   DASQSL010002139 DASQSL010000000
VERSION     DASQSL010002139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1991
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40418"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1003
                     /locus_tag="VE844_21490"
     CDS             <1..1003
                     /locus_tag="VE844_21490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HZC03816.1"
                     /translation="FPASGTGGWEAAVTNTLSPGDKVLMSGFGHFSNLWIDLCQRHKL
                     DVQALEVDWGEGVPVEKYAEILKADKDHQIKGVFATQNETATGVASDIVAVRRALDEA
                     DHPALLFVDGVSSVASIDFRMDEWRVDVCVSGSQKGFMLPTGLAIVCFSQKALEARKT
                     AQCPRCFFDIEDMIKANVNGYFPYTPAMILLRGLRESVNMLLEEGLENVFARHHRMAE
                     GVRAAVKGWGLKLVAKEPKWYSDTVSAIYVPEGFDGNEVVRHAYRRYNLALSVSLAKI
                     AGKAFRIGHLGDLNELMVLTPIAGAEMAMRDLGIKVELGSGVAAAQEYLRQTAKDRF"
     gene            1033..1980
                     /locus_tag="VE844_21495"
     CDS             1033..1980
                     /locus_tag="VE844_21495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018401607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HZC03817.1"
                     /translation="MSHTRYEPVRQRLQRSELAVPGSNPTMFEKALKSEADYVFLDVE
                     DAVAPDDKERARQNIIEALNDLDWKAHSKTISVRINGIDTHYMYRDVVDIVEQAGHKL
                     DTILIPKVGVPADVYLVDAIVTQIEMAKGITHRIGLEALIETALGMANVEAIATSSKR
                     LEAMHFGVADFAASCRARTVIIGGLNPDYPGDQWHAALSRMVVACRAYGLRAIDGPFG
                     DFNDPEAYRAAAQRAAVLGYEGKWAIHPSQIPLANEVMSPPEKEVTRAKRILEVLAEA
                     AKAGKGAAQLDGRMIDAASARMAENIVKTDGAIQAKKGR"
BASE COUNT          419 a          543 c          626 g          403 t
ORIGIN      
        1 ctttcccgcc tccggcactg gcggatggga ggccgccgtg accaataccc tgtccccggg
       61 tgacaaggtc ttgatgtctg gctttggaca tttcagtaac ctctggatcg atctctgcca
      121 gcgccacaag ctcgatgtcc aggccctcga agtcgattgg ggcgagggtg tgccggtaga
      181 gaagtacgcc gagatcctga aagcagataa ggatcatcag atcaagggtg tattcgccac
      241 ccaaaatgaa accgcaaccg gtgtggcgag cgacattgtc gcggtgcgca gggccctcga
      301 tgaggctgat catccggcgc tcttgtttgt cgatggggta agctcggtcg ccagcatcga
      361 cttccgtatg gacgagtggc gtgtggatgt gtgcgtgagt ggctcgcaaa agggtttcat
      421 gttgcccacg gggctcgcga ttgtatgctt cagtcagaag gccctggagg cccgcaaaac
      481 ggctcaatgt ccccgctgct tctttgacat cgaggatatg atcaaggcca atgtcaacgg
      541 ctacttcccc tatacgcccg ccatgatctt gctcaggggc ttgcgcgagt cggtcaatat
      601 gctgctcgag gaggggcttg agaatgtgtt cgcccgccat catcgcatgg cggagggcgt
      661 ccgtgccgca gtcaaaggct ggggacttaa gctcgtggcc aaggagccca agtggtattc
      721 cgataccgtg agcgccatct atgtgcccga aggctttgac ggcaacgaag tggtccggca
      781 cgcttaccgg cgctataacc tcgcgctcag cgtgagcctc gccaagatcg cgggtaaagc
      841 cttccgcatc ggtcacttgg gtgatctcaa tgaattgatg gtcttaaccc cgatcgccgg
      901 cgccgagatg gccatgcggg atctcggtat caaggtcgag ttgggcagcg gtgtggcggc
      961 ggcccaggaa tacctgcggc agactgccaa agatagattt taattataat accgacttag
     1021 gagggtgtag ccatgagtca tacgcgttat gagccggtac gccaacggct ccagcgaagc
     1081 gagctcgcgg tgccgggttc aaatccaacg atgttcgaga aggcgctcaa gagcgaggca
     1141 gattatgtgt ttttggatgt ggaggatgct gtcgctcccg acgataaaga gcgagcccgc
     1201 cagaatatca ttgaggccct aaacgatctg gattggaagg cgcacagcaa gaccatctcg
     1261 gtgcgcatca acggcatcga tacccattat atgtaccggg atgtggtcga tatcgtcgag
     1321 caggccgggc ataagctcga taccatcctg atcccgaaag tcggggtgcc cgccgatgtg
     1381 tacctggtgg atgcgatagt cacccagatc gagatggcca aggggatcac ccaccggatc
     1441 ggtctcgaag ccctgatcga gacggcactc ggcatggcca atgtggaggc gatcgcgacc
     1501 tcgagtaagc ggcttgaggc catgcacttt ggggtcgccg actttgccgc cagctgccgc
     1561 gcgcgcaccg tcattatcgg cggtctcaac cccgattatc cgggtgatca atggcatgca
     1621 gccctatcac gcatggtggt ggcgtgccgg gcctatggcc tgcgcgcaat cgatgggccg
     1681 tttggcgatt ttaacgatcc cgaagcttac cgggctgcgg cacagcgggc tgcggtgctc
     1741 ggttatgaag gcaaatgggc catccacccc tctcagatcc cgctcgccaa cgaggtcatg
     1801 tcaccgcccg agaaagaagt gacgcgggcg aaacgtatct tggaggtgct ggccgaggcc
     1861 gccaaagcag gtaaaggcgc ggcccagttg gatggccgga tgatcgatgc ggcctcggca
     1921 cgcatggctg aaaatatcgt caagactgat ggggctattc aagccaagaa aggccgatag
     1981 tcaagtcagt t
//
LOCUS       DASQSL010002140         1065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_121536, whole genome shotgun sequence.
ACCESSION   DASQSL010002140 DASQSL010000000
VERSION     DASQSL010002140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121536"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(614..883)
                     /locus_tag="VE844_21500"
     CDS             complement(614..883)
                     /locus_tag="VE844_21500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017715886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2442 domain-containing protein"
                     /protein_id="HZC03818.1"
                     /translation="MTIVASNDPRIMAVEVTDDLITAHLADGRTISVPLAWSWRLSNA
                     TPEQRQHFEIIGIGQGVHWPDIDEDISAIGMLTGTPAPPPKQKVT"
     gene            complement(864..>1065)
                     /locus_tag="VE844_21505"
     CDS             complement(864..>1065)
                     /locus_tag="VE844_21505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012508633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4160 domain-containing protein"
                     /protein_id="HZC03819.1"
                     /translation="FFYSFDCHDPPHVHVRHERMVCKFWLTPVALSANHGFSARELNR
                     IRAIILDNLNRILEAWHDHCGE"
BASE COUNT          246 a          313 c          316 g          190 t
ORIGIN      
        1 gctatcgcaa tcagtggaag gaaaaactac ccaacagggg agactgacgg ccgctgatca
       61 tgattcccca cacctagcca aagcagaacc atgctaagca cagcgcggac aagagcgcta
      121 ccacctcaat ggctgcaaga actctgctca gagtgttgct catgcgggct taacggacga
      181 agctgagcgg tgcggttaag cgcgtcggct gcacgttatt gatcctgatg gaggccccct
      241 cctcggcata ccccagtggg atgctggcat tgggcaaagc gccactcacg caagcggagg
      301 cgacctcagg cggttcgaca ccacgccaca ccccggcgcg ggggagcagc gcgggtgagc
      361 ctgaggtcta actggacacg caggggaatg cgccggaagt gagcgggctg tgccggttga
      421 gtggcgtccg cgcacgccca ggtagactgc cgacgacgcc aggccccgga aagcggcaca
      481 aaaccacaaa ccccgcacag gagcagtttg ttccttgaca aaagaaggcc ttacacgtgg
      541 ttaggtgtgc atgggcacga gccactgact gtgaaccagc ctaccgcccg tttcccacct
      601 acatgacctc ttgtcacgtc accttttgct tcggaggagg ggcaggagtg ccagtgagca
      661 tgccgatggc gctgatgtcc tcatcaatgt ccggccagtg aaccccttgc ccgatcccga
      721 taatttcgaa gtgctggcgt tgctctggcg tggcattaga caaccgccac gaccacgcca
      781 gcgggacgct gatcgtgcgg ccatctgcca gatgggcagt gatcaggtcg tcggtgacct
      841 ccactgccat aatccgtgga tcattactcg ccacaatggt catgccatgc ctccaagatg
      901 cgattgaggt tgtcgagaat gatggcccgg atgcggttca gttcgcgggc tgaaaacccg
      961 tgattcgcac tcaatgcgac cggggtcagc caaaatttac acaccatacg ctcatggcgt
     1021 acatggacat gcggggggtc atgacaatca aaactgtaga agaaa
//
LOCUS       DASQSL010002141         1158 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_40434, whole genome shotgun sequence.
ACCESSION   DASQSL010002141 DASQSL010000000
VERSION     DASQSL010002141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40434"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            213..1127
                     /locus_tag="VE844_21510"
     CDS             213..1127
                     /locus_tag="VE844_21510"
                     /inference="COORDINATES: protein motif:HMM:NF033547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HZC03820.1"
                     /translation="MLVLSHLHQLLNVNTCHAYIHMLRWKDRPLQCPRCHSRAVRPWG
                     HYHYRPGVKRYWCHGCRRTFNDLTHTLFAQSKRSLVHWILATFLLCLACSSRRIAREL
                     RAHVRTRDRWCWWLRNAALSYEMERQVEGTVEADELYHTAGNKGQAHQGGKKSLGHRP
                     RRRRKKREPGQGHYDKDRPAMIAWVSRQGSVVGQAVKDFTVHTVQQAADFAVKVGSRL
                     YTDSASSYRALKGYMHEFVNHTKKEYARGDVHENRAECLFSLLKPYLRVFRGLSKANL
                     PGYLGFFQFLRNVRQRNAFEQAELLIRA"
BASE COUNT          253 a          355 c          315 g          235 t
ORIGIN      
        1 aaatagacat gaagtccacg ccgcagggtt tctcccagtg cattgagtgc aatgatagac
       61 tttccgttcc cggccacccc gcgtactatt gagcttcacc aaagttaggt cgctcaattt
      121 atcggagttt gtagaggggg aagcgtgata cagagagaga atctcacgat ccgttctaga
      181 gttgatctcg tgaccagagg agattctctg tcatgctggt cctctcgcat ctccaccaac
      241 tcctcaacgt taatacctgc cacgcctata tccatatgct tcggtggaaa gatcgcccgc
      301 tccaatgtcc ccggtgtcac agccgagctg tccgtccctg gggccattac cactaccggc
      361 caggggtgaa acgctactgg tgccacggct gtcggcgcac cttcaacgac ctcacccaca
      421 cactgttcgc ccagagcaaa cgatctctcg tccactggat cctcgccacc ttcctgctgt
      481 gcctcgcgtg ttcgtctcgt cgcatcgcca gagagctacg tgcccatgtc cgcacccgcg
      541 atcgctggtg ctggtggctg cgcaacgccg ccctgtccta tgaaatggag cgccaagtcg
      601 aggggaccgt tgaggcagat gaactctatc acaccgccgg gaacaagggc caagcacacc
      661 agggcgggaa aaagtccttg ggacaccggc cgcgtcgtcg ccgcaagaag cgtgagcccg
      721 gccagggcca ctatgacaaa gaccggccag ccatgatcgc atgggtgagc cgccaaggtt
      781 ccgtcgtggg gcaagctgtc aaggatttta ccgtccacac ggtgcaacag gcagccgact
      841 tcgccgtcaa agtgggcagt cggctctata ccgactcggc cagtagctac cgggcgttga
      901 agggctacat gcacgaattc gtcaatcata cgaagaagga atacgcgcgt ggcgacgtgc
      961 acgagaatcg ggcggagtgt ctgttctcct tgctcaagcc ttaccttcgg gtgtttcgtg
     1021 gcctcagcaa agccaacctg ccaggatacc tcgggttctt tcaattcctg cggaacgttc
     1081 gtcaacggaa tgccttcgag caggcggagc tactgatccg tgcataaaga cctaaagttt
     1141 cgcaccacga aagacgcc
//
LOCUS       DASQSL010002142         2004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_40552, whole genome shotgun sequence.
ACCESSION   DASQSL010002142 DASQSL010000000
VERSION     DASQSL010002142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2004
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40552"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(75..704)
                     /locus_tag="VE844_21515"
     CDS             complement(75..704)
                     /locus_tag="VE844_21515"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC03821.1"
                     /translation="MESTEARPPCPPTRRRGDSPVARGDLAGPQKGAQAQGQTIFFID
                     ESGFYPLPSVVRTYAPMGQTPILREWCTREPLSAISAMSPEGQRYFHCQNSTLNSEDV
                     IAFLEHLLREVPGRMVLIWDGSPIHRSHRIREFLANGAAPRLHLERLPAYAPELNPDE
                     GLWQQLKGVELRNVCCFNISHLRVELRDAVKRVRRKPRLIQSFFRGAKL"
     gene            731..1108
                     /locus_tag="VE844_21520"
     CDS             731..1108
                     /locus_tag="VE844_21520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03822.1"
                     /translation="MARVVRDPECQPKDGGNSSARPDLSPEAVRFGATLPQHRQLGER
                     LGRQSARGSRGRAMAQGLRAALASACHPLADGPFADTQGRGDLALRPALLLEVPGLEP
                     SGFFPVVRYGFHAWQCITAPAGL"
     gene            1267..>2004
                     /locus_tag="VE844_21525"
     CDS             1267..>2004
                     /locus_tag="VE844_21525"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03823.1"
                     /translation="MFRIIRVPPSLDNFFHPLKGHFHWNHFAYFRLLVLAIAFMWGRR
                     NVTNLSRYLDTAPHRTRFNNFFLVERWAPEAALRQQAQTLLRSLHPRKGETLYLILDD
                     SKKAKRGRTMDAIAKMKDPTTDTYIQGHQYVCAILVCRDYVIPFGIRLYVKQAHCPAL
                     GLPFRKTTELAAQLIREFKAPTGVKVVVLFDAYYLCPTVVKACREKRFHFASTLKSNR
                     SLFKQGWKLKAGRYGRNLFRRRRTDTLD"
BASE COUNT          378 a          614 c          597 g          415 t
ORIGIN      
        1 cgtcgcgatt gtattcgcag tcaacgttgt agcccggaat ctcttgctcc aaatactgac
       61 ctagatattg aaagctaaag ttttgcccct cgaaagaagc tttgaattag gcgcggtttg
      121 cgccggactc gcttcaccgc atcgcgtagt tccacccgaa gatgcgagat gttgaagcag
      181 cagacattgc gcagctcgac ccctttgagc tgttgccaga ggccctcgtc aggattcagc
      241 tctggggcat aggccggcaa gcgctctaga tggaggcgtg gtgccgcccc gttcgccagg
      301 aactccctga tgcgatggct gcggtggatg ggtgatccat cccagatgag caccatccgg
      361 cccggcactt cacgcagcag gtgctccaga aaggcgatga catcctccga attcagtgtg
      421 ctgttctggc agtggaagta ccgctggccc tcaggcgaca tcgcgctgat ggcggaaaga
      481 ggctctcggg tgcaccactc ccgcaagatg ggtgtctggc ccatgggcgc ataggtgcgc
      541 acgacgctcg gcaaggggta gaatccggat tcgtcgatga agaagatggt ttgcccttgg
      601 gcttgcgccc ccttttgagg gccggccagg tctcctcgcg ccaccgggct atcgccgcgt
      661 cgtcgcgttg gcgggcacgg cgggcgggct tctgtggact ccatcgtagg gccttgcaca
      721 agcgcccaac atggcgcggg tggtaagaga tcccgaatgc caaccgaagg acggcggcaa
      781 ttcgtccgcg cgtccagacc tgtccccgga agccgtacgc ttcggggcca cgctgccgca
      841 gcacaggcag ctgggcgaac ggctcggccg acagtcggcg aggggctcca gggggcgggc
      901 gatggcgcaa ggcctccgag ccgccctcgc gagcgcgtgt catccactgg ctgacggccc
      961 cttcgctgac acccagggcc gtggcgatct ggcgctgcga ccagccttgc tgcttgaggt
     1021 gccaggcttg gaaccgtcgg gcttctttcc agttgtgcgg tatgggtttc atgcctggca
     1081 gtgtatcaca gcaccagctg ggctttagca attcatgtcc gcatcagtaa gttctcaagt
     1141 tgactgattt ttgagaggga cctggcgtag agggcttgac agcagcggta gaagaggcaa
     1201 tcctccgggt aggattaagg cacgtaccca tctcccgcat gccggcgggg tgaggaggat
     1261 tgccccatgt tccgcatcat acgcgtgccc cccagccttg acaacttttt tcaccccctg
     1321 aaggggcatt ttcactggaa tcatttcgcc tactttcgcc tgttggtcct cgccatcgcc
     1381 tttatgtggg gaagacggaa tgtcaccaac ctgtctcggt atctggacac tgcgccccac
     1441 cggacccgct tcaacaactt cttcttggtt gagcggtggg cccccgaggc ggcgctccgc
     1501 cagcaggccc agacattgct gcgctccctc catccccgca agggagagac cctctacttg
     1561 atccttgatg attccaagaa agccaaacgc gggagaacaa tggacgccat cgccaaaatg
     1621 aaggacccca cgaccgacac gtacatccag ggccaccagt atgtctgcgc catcctggtc
     1681 tgtcgtgatt acgtcatccc gtttggcatc cgactttatg tcaaacaagc gcactgtcca
     1741 gccttggggc tacccttccg taagaccact gaattggccg ctcaattgat ccgggagttc
     1801 aaggctccca ctggcgtcaa ggtcgtggtg ctgtttgatg cctactatct gtgcccgacc
     1861 gttgtgaagg cttgccgtga gaagcgcttc cactttgcgt ccacgctcaa gagcaatcgc
     1921 agtctcttca agcagggctg gaaactcaaa gccggccgct atggcaggaa tctgtttcgg
     1981 cggcgccgca ccgacaccct cgac
//
LOCUS       DASQSL010002143         1481 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_175813, whole genome shotgun sequence.
ACCESSION   DASQSL010002143 DASQSL010000000
VERSION     DASQSL010002143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1481)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1481)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1481
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175813"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(205..852)
                     /locus_tag="VE844_21530"
     CDS             complement(205..852)
                     /locus_tag="VE844_21530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011563511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03824.1"
                     /translation="METGQALDHEPGPAVRVRKKQRDRLIRLAAAHSEWVLGFADEVW
                     WSRLAQPDLHAWADHKPVRLREMTLPKEDADPKAVACYGILRADTQEVLVRFVDGRPV
                     SHVTTSFLSWIGELLKADGKKALLLAWDNASWHVSKEVRSWVQAHNRQVKREGGVRVL
                     VCQLPVKSPWLNRIEPTWVHAKRAVAEPDRLLSKAELIGRICSYFTCKYVEHLIC"
     gene            complement(777..1283)
                     /locus_tag="VE844_21535"
     CDS             complement(777..1283)
                     /locus_tag="VE844_21535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007916080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC03825.1"
                     /translation="MYVGPLSSTRRQRLEKGLRSRDAFELRRCQILLASASSQRPSQI
                     AAHLGCTAQTVRNTIRAYRADMTTCLRAKSSRPKSVAPVLDEAKRERLRTIVHESPRS
                     FGKHTSLWTLRLLAEVCFEQGVTSRALSIESMRRAFKRMGVAWKRAKHWITSPDPRYA
                     LEKSSAIG"
BASE COUNT          308 a          437 c          416 g          320 t
ORIGIN      
        1 gaagctaaga tgggcgaagt ttttgaacct aatcatataa tctattcgcc tcggttaggc
       61 taactgcctg gaggatgttg aaatgctcac agccggttaa gatcgggcat ttttcgatcc
      121 gccggtacct tggaagaaaa cgtgatctga gagctaccta gtgcaggttc acgcgacctt
      181 ttttgcaatc gctgtttaag atgctcaaca tataagatgc tcaacatact tgcacgtgaa
      241 ataggagcag atacgcccga tgagttctgc tttgctcagg agccgatccg gttcggcgac
      301 tgcccgcttg gcgtggaccc acgttggctc gattcgattc agccacgggc tcttgactgg
      361 caactggcag accaagactc gcacgccacc ctcacgcttg acctgccggt tatgggcctg
      421 aacccacgag cggacttcct tgctgacgtg ccaactggcg ttgtcccacg ccagcagcag
      481 cgccttcttg ccgtcggcct tcagcaactc gccgatccaa ctgaggaagg aggtcgtcac
      541 atggctcacg ggacgaccgt caacgaagcg aaccaacacc tcctgcgtgt cagctcgaag
      601 gatcccgtaa caggcgacgg ccttcgggtc tgcgtcctct ttcgggaggg tcatctctcg
      661 cagtcgaacc ggcttgtggt cggcccacgc atgcagatcg ggttgcgcca gacgagacca
      721 ccagacttca tcggcgaagc ccagtaccca ttccgaatgg gccgctgcca agcggatcag
      781 ccgatcgcgc tgcttttttc taacgcgtac cgcgggtccg ggctcgtgat ccagtgcttg
      841 gcccgtttcc atgcaacccc cattcgtttg aaggcgcgcc gcatcgactc gatactcaag
      901 gcgcgggagg tcacgccctg ctcaaagcag acctcggcca gcaggcgaag cgtccacaga
      961 ctggtgtgct tgccaaacga acgaggactt tcgtgcacga tcgtccgaag ccgttcgcgt
     1021 ttggcttcgt cgagcacggg tgcgacactt ttggggcgag acgatttggc tcgcaagcag
     1081 gtcgtcatgt cggctctgta cgcacgaatc gtgttgcgca cggtttgtgc cgtacatccg
     1141 aggtgtgccg cgatctgaga gggacgttgg ctactcgcgc tggcaagcag gatctggcag
     1201 cgtcgtaact caaaggcgtc gcgtgagcga aggcctttct ccagacgctg tcgtcgcgtg
     1261 ctcgacagcg gaccaacata cattgggggt ttcatagtcc ccattatcgc aagggcaatg
     1321 cattgcaaac aagctcctgt gaagctgcac taggctccct tcttgcccat accattttca
     1381 gggagtgttt caggcgcaca aaccctgagg cccgccaaaa gcgggcaacc ggtcccttta
     1441 taaacctaca atagcgtgtg tgacctaagc agcaatgagt c
//
LOCUS       DASQSL010002144         1326 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_175859, whole genome shotgun sequence.
ACCESSION   DASQSL010002144 DASQSL010000000
VERSION     DASQSL010002144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1326
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175859"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..374)
                     /locus_tag="VE844_21540"
     CDS             complement(<1..374)
                     /locus_tag="VE844_21540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013033378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase subunit E"
                     /protein_id="HZC03826.1"
                     /translation="MSLKGKGEKEGRRRGRKVDPKALGEIRALLGDAPRRRDLLIELL
                     HRIQDHYHCISAAHIVALAKEMNLPTTEVYEVATFYHHFDVIKEADTLPPPLTVRVCN
                     SMTCEMFGANALIVDLERRLGP"
     gene            complement(382..1203)
                     /locus_tag="VE844_21545"
     CDS             complement(382..1203)
                     /locus_tag="VE844_21545"
                     /EC_number="1.2.7.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017839816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018493 - formylmethanofuran dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0015948 - methanogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran dehydrogenase subunit C"
                     /protein_id="HZC03827.1"
                     /translation="MSPLTFTLEKRPALPVDLSPLIPERLHGKKIAEIKAIPLASGNQ
                     TREVGELFKITGRDPSHIVIHRSSAKLYRVGAEMTTGLIEIHGTVGDLLGQDMDGGSI
                     TVRGNTGQWMGSGMKGGVIQISGNTGDFLGAARPGDAEGMSNGTIIVTGQAGDRVGDG
                     MRRGTIVIKGDAGHYCGSRMLAGTILVLGGIGTSPGLGMRRGTLVLASRPSHIAATFN
                     SCGILKVEFLRLLFKQLSSMHNRLRFLKDFGPEAERFVGDMALGGKGELLVLTLT"
BASE COUNT          283 a          407 c          362 g          274 t
ORIGIN      
        1 tcggggccga gacggcgctc tagatcgacg attaaggcat tggctccgaa catctcgcag
       61 gtcatcgagt tgcagacccg cacggtgagc ggcggtggca gggtatcggc ttctttgatg
      121 acatcgaaat gatggtaaaa ggtcgccacc tcgtagacct cggtggtcgg cagattcatc
      181 tccttggcga gcgccacgat gtgggccgcc gagatacagt ggtagtgatc ctggatccga
      241 tgcaggagct cgatcaggag atcccgccgg cgcggggcgt cacccaagag tgctcggatc
      301 tcacccaacg ccttgggatc gaccttacga ccgcggcggc ggccttcttt ttcacccttt
      361 ccctttaaag acatagtgtc ctcatgttaa tgtcaaaacc aataactcac ctttaccgcc
      421 caaggccata tcaccgacga accgctccgc ctcgggaccg aaatccttaa gaaatcttaa
      481 gcgattatgc atgctactca gctgtttaaa caacaggcgc aagaattcga ccttgaggat
      541 cccgcaggag ttaaacgtcg cggcaatgtg gctgggcctc gatgccaaga ccagggtccc
      601 gcgtctcatg ccaagacccg gcgaggtgcc aatgccaccc agcaccagga tggtgccggc
      661 cagcatgcgg ctgccacaat aatggccggc atcacccttg atgacgatcg ttcctcgacg
      721 catgccatca cccacccgat cgccggcctg gccggtaaca ataatagtcc cattcgacat
      781 gccttcggcg tcgccgggcc gggcggcacc tagaaagtcg ccggtattgc cagagatctg
      841 gatgacccca cctttcatgc cactgcccat ccactggcct gtattaccgc gcaccgtaat
      901 gctgccacca tccatatcct gtcccagcaa atcgccgacg gtcccatgga tctcgatgag
      961 gcccgtggtc atctcggcac ccacgcgata gagcttggcg gagctgcgat gtatcacgat
     1021 atggctggga tcgcgcccgg tgatcttgaa taactcaccg acctcccgtg tttgattgcc
     1081 gctggcaagc gggatcgctt tgatctcggc gatcttcttt ccgtgcaagc gctccgggat
     1141 gagcggcgag agatccaccg gcagagccgg gcgtttttca agcgtaaagg tcagcgggct
     1201 cataatagga tctcgcgcag atgaaagtga taggggtcca atttttgggg tccactatag
     1261 atattacacg acctgacccg tcccttccac gcttgcggtg cttgcaacaa cggcacctaa
     1321 tgcccg
//
LOCUS       DASQSL010002145         1337 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_175888, whole genome shotgun sequence.
ACCESSION   DASQSL010002145 DASQSL010000000
VERSION     DASQSL010002145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1337)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1337)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1337
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175888"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..333
                     /locus_tag="VE844_21550"
     CDS             <1..333
                     /locus_tag="VE844_21550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011064354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 family protein"
                     /protein_id="HZC03828.1"
                     /translation="IYVSAFNHGFDPYTYISNIPLERVQQFHLAGHRDLGDHRIDTHD
                     EPVIDPVWALYESAVQRFGAVSTMIERDDHIPPLPELLIELDHARSLAQQVYAGIYGS
                     PVLLRQLG"
     gene            330..1139
                     /locus_tag="VE844_21555"
     CDS             330..1139
                     /locus_tag="VE844_21555"
                     /inference="COORDINATES: protein motif:HMM:NF021364.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding domain-containing protein"
                     /protein_id="HZC03829.1"
                     /translation="MNPLLRELQERLQSYILQGDTHIENQIVTTGRLTARLRLDIYAT
                     AYRLRLLEALEANFPALYALVTKEEFSKLGEGYIQAYPSHSFSLRHFGGHLRAFLAST
                     PPYCHKPWLAEMAAFEWALGEAFDAADSPTTLTIADISAVPPIYWTEMRLCLQPSVQR
                     LDLHWNVPLLWKTIDRQETPGTPVESKIPTSWVLWRQELKNYFCSVKEDEAWAVDAAK
                     AGKTFGAICEGLCRWHQDTEVARQAASLLRKWVTEGWVAGIDTAPEITLEA"
     gene            1143..>1337
                     /locus_tag="VE844_21560"
     CDS             1143..>1337
                     /locus_tag="VE844_21560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate--CoA ligase family protein"
                     /protein_id="HZC03830.1"
                     /translation="MWPLQRNRAQAAFERFLNTSLDTVLEQHLSISAISQALSLFREV
                     VDSVPAYSAFLKEQGIDPAAI"
BASE COUNT          292 a          392 c          352 g          301 t
ORIGIN      
        1 atctatgtca gcgccttcaa tcatggattt gacccttata cctatatttc taacatccca
       61 ctcgagcggg tacaacaatt ccacttggcc ggccaccgcg atctcgggga tcaccgcatc
      121 gatacccatg atgaacccgt catcgatccg gtatgggcgc tctacgaatc cgcagtgcag
      181 cgttttgggg cggtctctac gatgatcgag cgcgacgatc atatcccgcc gctccctgaa
      241 ctcctgatcg aacttgacca cgcacgaagc cttgcccagc aggtgtatgc tgggatatac
      301 ggttctcctg ttctcttaag gcaattggga tgaatcccct acttcgggag ctgcaggagc
      361 gtttgcagtc gtatattctg cagggtgata cgcacattga aaaccagatc gtaactaccg
      421 gtcgcctcac tgcccgcctg cgcctggaca tctatgcaac cgcttaccga ttgcgtctat
      481 tagaagcgct cgaagcgaac ttccctgcct tatacgccct ggtaaccaaa gaggaatttt
      541 caaaactcgg tgagggctat atccaagcct atccctccca ctccttctcg ctccgccatt
      601 ttggcggcca cttgagagca ttcctcgcca gcaccccacc ctactgccat aaaccatggt
      661 tggctgagat ggcggctttt gaatgggcgc ttggcgaagc ctttgatgct gcagatagcc
      721 cgaccaccct tacgatcgct gacataagcg ccgtgccgcc catctattgg accgagatgc
      781 gcctctgcct gcagccctct gtgcagcgtt tggatctgca ttggaatgtg ccgctcttat
      841 ggaagacgat agaccggcag gagacgccgg gcacaccggt ggagagcaaa atacctacgt
      901 cttgggtgct gtggcgtcag gagctcaaga attatttttg ctcagttaaa gaggatgagg
      961 cctgggcagt agatgcagcc aaggcgggga aaaccttcgg cgcgatctgc gagggcctat
     1021 gccggtggca ccaagacacc gaggtggcgc ggcaggcggc gagtctattg cggaaatggg
     1081 tgacagaggg gtgggtggcc ggtattgaca ctgcccccga aatcacccta gaagcatagc
     1141 gtatgtggcc acttcaacgt aaccgggccc aagctgcctt cgaaagattt ctgaacacat
     1201 cccttgacac ggtacttgaa cagcatctca gtatttccgc catcagccaa gccctgagcc
     1261 tctttcgaga ggtcgtggat tccgtgcccg cctacagcgc tttccttaag gaacaaggta
     1321 tcgaccccgc tgcgatt
//
LOCUS       DASQSL010002146         2614 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_203681, whole genome shotgun sequence.
ACCESSION   DASQSL010002146 DASQSL010000000
VERSION     DASQSL010002146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2614
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203681"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..537)
                     /locus_tag="VE844_21565"
     CDS             complement(<1..537)
                     /locus_tag="VE844_21565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HZC03831.1"
                     /translation="MNRPSCESRVNLTAMGYGGEWNATDQVPRRAVESGLVGRFGALD
                     PSDGGETHRSSLSGEWRRSSQASATHLHGYFIDYALNLFSNFTFFLDDPVNGDQFEQE
                     DDRQVYGVHAHHTWFGSWGGFEMENTVGLQLRYDDIGSVGLFNTIERRRLATIRQDSV
                     DQISVSPYLQNRTQWLPKF"
     gene            complement(600..2375)
                     /locus_tag="VE844_21570"
     CDS             complement(600..2375)
                     /locus_tag="VE844_21570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HZC03832.1"
                     /translation="MFLRATKRFKDGKQHRYWSIVENRRCRGNRIVQRQVLYLGEIND
                     VQHQGWCKTIEVLEEDQRQAHQVALFSEARPAPTLDPATVQVKLRELQLHRPRQWGAC
                     WLACKLWDQLALDVFWSDRLRCSRQGTRWLNVFKTLVCYQLIEPGSEWRLHRKWFEQS
                     AMGDLLGEDFTLMQKDKLYRCLDKLLAHKRDFFSCLKGRWQLLFHARFDILLYDLTST
                     YFEGGPPEEEGLRRYGYSRDKRPDCVQVVIALITTPEGFPLAYEVMPGNTSDKTTLAD
                     FLKKIEVQYGKSERVWVMDRGIPTEETLKQMRQSDPPVSYLVGTPRGRLTALEKAFLG
                     KPWEHARESVSVKLLAQEGELYILAKSEGRLHKERAIRRRKLKHLWKRLHELQQQKLT
                     RDQLLVKLGAAKKEAGRAYFLVELRLPQDDEELKANGFRFKLHKDKLRKARRREGHYL
                     LRSNLTPSDPARLWHYYIQLTEVEQAFKELKGDLAIRPIYHQLDERIEAHIFVAFVAY
                     CLQVTLKQRVRALAPGLTPRAVLDKFAAVQMVDVHLPTTDGRYLVLPRYTQPEKDLQL
                     FLKQLQLELPTQPLPKIKSCASLTK"
     gene            complement(2425..>2614)
                     /locus_tag="VE844_21575"
     CDS             complement(2425..>2614)
                     /locus_tag="VE844_21575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03833.1"
                     /translation="KPRQSLIGLCLCLHRKPFNIHHRFPRTLLTRLSQLTTRFSEFSR
                     FDGCKRLIFLHAHPEKGL"
BASE COUNT          583 a          709 c          732 g          590 t
ORIGIN      
        1 gaacttcggc agccactggg tacggttctg gaggtagggc gagacgctaa tttgatcgac
       61 gctgtcctgc cggatggtgg cgaggcgtcg gcgttcaatg gtattgaaca ggcccacact
      121 gccgatgtcg tcatagcgca gctgtagccc cacggtgttt tccatctcga agccgcccca
      181 gctaccgaac caggtatgat gggcatggac gccgtagacc tggcgatcgt cctcctgctc
      241 gaactgatcg ccgttgaccg gatcatcgag aaagaaggtg aagtttgaga acagattgag
      301 cgcgtaatcg atgaaataac catggaggtg ggtcgcagac gcttgactgc tgcgccgcca
      361 ttcgcccgag aggctcgagc ggtgggtctc gcccccatcg ctcgggtcca gcgccccaaa
      421 gcggccgacg agaccgctct ccaccgcccg gcgcggtacc tggtcggtgg cgttccactc
      481 cccgccatag cccatggcgg tcaggttaac ccgactttcg caactcggcc tattcaagaa
      541 gcataaccta ttgatttcac taacatcagt ttacgggagt cttcactaca agaagaaggc
      601 tactttgtca ggctagcgca tgatttaatc ttgggtaaag gctgggtcgg caattccagc
      661 tggagctgtt tgaggaacag ctggagatct ttctccggct gcgtatagcg cggcaagacg
      721 agatagcgtc catctgtagt aggcaaatgc acatcgacca tttgtaccgc agcgaatttg
      781 tccaataccg ctcttggggt caatcccggc gccaaggcac gcacgcgctg tttcagcgtc
      841 acctgcaggc aataggccac gaaggcgaca aagatatgcg cctcgatgcg ttcgtctaat
      901 tggtggtaga tggggcggat cgcgaggtcg cctttcaatt ctttgaaggc ctgttcgacc
      961 tcggtcagtt ggatgtagta gtgccaaagc cgggcgggat cactcggggt cagattggaa
     1021 cgcaacagat aatggccctc gcgtcggcgt gctttgcgca gtttgtcttt gtgcaactta
     1081 aagcgaaaac cgttggcttt gagctcctca tcgtcttggg gcaaccgaag ttcgactagg
     1141 aaataggcgc gtccggcctc ctttttggcc gccccgagtt tgaccagcaa ttgatcgcgg
     1201 gtcagtttct gctgttgcag ttcgtgtagg cgtttccaga ggtgttttaa tttgcgacgg
     1261 cgtatggccc gctctttgtg tagccgtcct tcgcttttgg ccaggatata caattcaccc
     1321 tcctgggcca gtaacttcac ggacaccgac tcgcgcgcat gctcccaggg tttgccgaga
     1381 aaggcctttt ccaaggcggt caggcgacca cggggggtac cgaccagata agagaccggt
     1441 ggatcgcttt ggcgcatctg cttaagagtt tcctcggtcg gaatgccccg atccatgacc
     1501 cagacacgtt cgcttttgcc atattgcact tcaatctttt tgagaaaatc cgccaaggtg
     1561 gttttgtcac tagtgttccc tggcatcact tcataggcca aggggaaacc ctccggcgtg
     1621 gtgatcaagg caatcaccac ttggacacaa tcggggcgtt tatcacggct gtagccgtag
     1681 cggcgcaaac cttcctcctc gggcggaccg ccctcaaaat aggtgctggt caggtcatag
     1741 agcaaaatat caaagcgtgc gtggaataag agttgccaac gtcctttcag gcaggagaag
     1801 aaatcgcgtt tatgagccaa caacttgtct agacagcgat agagcttatc tttttgcatc
     1861 agggtgaaat cttcccccaa cagatccccc atcgcgcttt gttcgaacca ctttcgatgc
     1921 aaccgccatt cactgcccgg ctcgatcagc tggtaacaca ccaaggtctt gaagacattg
     1981 agccaacgcg tgccctggcg ggaacacctc agtcgatcgg accagaacac atctaatgcc
     2041 aattgatccc agagcttaca ggccagccaa cacgcccccc attgacgcgg acgatggagt
     2101 tgtagttcac ggagtttgac ctgcaccgtc gctgggtcaa gagtgggtgc ggggcgagct
     2161 tctgaaaata gtgccacttg gtgcgcctgg cgctggtctt cctcaaggac ctcaatcgtt
     2221 ttgcaccacc cctgatgctg cacatcatta atctcaccca aatagagcac ctggcgctga
     2281 acaatgcgat tgccccggca gcgacggttc tcaacgatac tccaatagcg gtgttgctta
     2341 ccgtctttga agcgtttggt ggcgcgcaga aacatgccat cagtgtggca aaaaccaccg
     2401 ctaaatcaat agggtaggtc ttcactacaa gcccttttca gggtgagcgt gtagaaaaat
     2461 cagccgctta caaccgtcaa accgggaaaa ttcgctaaat cgggtggtga gttgagaaag
     2521 tcgggttaac agtgtgcgag ggaaacggtg atgaatattg aagggcttgc ggtgcaggca
     2581 gaggcaaaga ccaatgagcg actggcgcgg cttg
//
LOCUS       DASQSL010002147         1053 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_175938, whole genome shotgun sequence.
ACCESSION   DASQSL010002147 DASQSL010000000
VERSION     DASQSL010002147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175938"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..803)
                     /locus_tag="VE844_21580"
     CDS             complement(<1..803)
                     /locus_tag="VE844_21580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ISKra4 family transposase"
                     /protein_id="HZC03834.1"
                     /translation="MSALNEAGCMATEEALKRFDTDGSAILIGGTKWTSKGEEPNYYQ
                     TPYGEVEVLRHVYQTSAGGKSFCPLERDARIVVTSTPRFAKVVANKFARSGSTQVESD
                     LAENHGRCVARSYLQNLAEAVGSIVQAKEETWHYATPRLTVPVHTVAIGLDGTCILLC
                     EEGYRQAMVGTISLYERHGERVHTIYVGATPEYGQAAFMERMEREIAHVKQLYPQATY
                     VGIADGAPSNWDFLEPHTRVQILDFYHAAEYLADAAQAAYPRSPTKRAE"
BASE COUNT          230 a          324 c          248 g          251 t
ORIGIN      
        1 cactcagcgc gctttgttgg gctacgggga taggcggcct gcgccgcatc cgccagatac
       61 tctgctgcat gatagaaatc gaggatctga acgcgggtat gcggttccaa gaaatcccaa
      121 ttgctcggcg cgccatcggc gatcccaaca taggtggcct ggggatagag ttgcttcaca
      181 tgggcgatct cccgctccat tcgttccata aaagcggctt gtccatattc gggggtcgct
      241 cccacataaa tcgtgtgcac tcgctcccca tgccgctcat agagcgagat cgtccccacc
      301 atcgcctgtc ggtagccctc ctcacacaat aatatacacg tcccatccag gccaatggcg
      361 actgtatgaa ccggtactgt caagcgcggg gtcgcatagt gccaggtttc ttccttggcc
      421 tggacaatac tacccaccgc ttccgccaga ttctgtaaat aggaacgcgc cacgcaccgt
      481 ccgtgattct ccgccagatc gctttccacc tgggtcgaac cgctacgcgc aaatttattc
      541 gccaccacct tggcaaatcg cggggtagag gtcaccacga tccgcgcatc tcgctctagc
      601 ggacagaagc tcttacctcc cgcgctcgtt tggtaaacgt ggcgcagcac ttcgacctcc
      661 ccatacgggg tttgataata gttcggttct tcacccttgg aggtccattt cgtacctccg
      721 attaggattg ctgaaccatc ggtgtcaaaa cgtttcaagg cttcctccgt ggccatacat
      781 cccgcttcat tcagggcact caagatcgcc tcttcgctct aaagccacga gcgactgagc
      841 ttgatattca gctcaatcct gactgtgtct ccttcaactg cgattaactt cactgacatg
      901 caaactcctt acacgcaatc gtttgccagt tattttctca taaatataac attacttaaa
      961 ggtcccactc gaccgaataa cgttacgtgc cagcagcaaa cggctggggg cgatcccgtt
     1021 gttaaaagtt atgtgaacgc acggtaccgc ggg
//
LOCUS       DASQSL010002148         3197 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_121806, whole genome shotgun sequence.
ACCESSION   DASQSL010002148 DASQSL010000000
VERSION     DASQSL010002148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3197
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121806"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..228
                     /locus_tag="VE844_21585"
     CDS             <1..228
                     /locus_tag="VE844_21585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012508719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antitoxin"
                     /protein_id="HZC03835.1"
                     /translation="RELAEAIHVPYQRINEIINERRGITPSTALRLAKFFGMSADFWM
                     NLQLRWDLYHAQLAESEELKTIRPHTAASVG"
     gene            complement(678..769)
                     /locus_tag="VE844_21590"
     tRNA            complement(678..769)
                     /locus_tag="VE844_21590"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(732..734),aa:Ser,seq:cga)
     gene            complement(839..2068)
                     /gene="ispG"
                     /locus_tag="VE844_21595"
                     /gene_synonym="gcpE"
     CDS             complement(839..2068)
                     /gene="ispG"
                     /locus_tag="VE844_21595"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013029549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HZC03836.1"
                     /translation="MTTSAISPIPRRRSIGVQVDSIMIGGAAPIMVQSMTNTDTADAV
                     ATVRQVQQLAAAGSELVRITVNTEEAARQVGKIRAMLDAAGCRVPLIGDFHYNGHMLL
                     TKYPECARALAKYRINPGNVGFGRKRDSQFATLIETAIEYAKPVRIGVNWGSLDGELL
                     TRMMDENAQLPEPKEARAVTQEALIVSALDSAERAQAIGLARDKIVLSCKVSGVQDLI
                     AVYTELAARCDYALHLGLTEAGMGSKGIVASTAGMAVLLQQGIGDTIRVSLTPEPGGD
                     RTREVIVAQELLQTMGLRSFAPLVTACPGCGRTTSTYFQELADKIQSYVREQMPIWRE
                     HYLGVENMTLAVMGCVVNGPGESKHANIGISLPGTGEEPAAPVFIDGKKAVTLRGERI
                     AEEFQQILDDYVRRTYA"
     gene            2191..3108
                     /locus_tag="VE844_21600"
     CDS             2191..3108
                     /locus_tag="VE844_21600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HZC03837.1"
                     /translation="MRIGIDLGGTKIEVIAFGDNGKVLFRDRVATPQEDYSGTLQVIA
                     ELVVRLERELGRQGTVGIGMPGAISPATGLVKNSNSVCLNGRRFDRDLERLLRRPLRI
                     ANDANCFALSEATDGAAAGAEVVFGVILGTGTGGGVAVRGAILVGANAIAGEWGHNPL
                     PWPHPEELPGPPCYCGKSGCIETYLSGPGLVRDFRAAGGRSISALEIGAQAESGDEYA
                     DAVLARYEDRLARGLASVINILDPDVIVVGGGLSNIKRLYTEVPRLWSQYVFSDTIAT
                     RLVQARFGDSSGVRGAAWLWPIEDLPMCS"
BASE COUNT          632 a          865 c          962 g          738 t
ORIGIN      
        1 cgcgagttag cagaagcgat tcacgtccct taccaacgaa tcaatgagat catcaatgag
       61 cgtcggggga taacgccaag caccgctctg cggttagcaa aattctttgg gatgtctgct
      121 gacttctgga tgaatttgca gttgcgttgg gatttgtatc acgcacaact cgcagagtca
      181 gaagagttga aaactattcg tcctcatacc gctgcatcag ttgggtaacg aatggccacg
      241 tggctgacgt cattggaaga tgctaccccg aagtcctgct ggggggaaca accagaacac
      301 ggccgctgag cgaggttcag caaaccgctt ggatcggacc gaagtaaacg cccgtgacgg
      361 tttgcctcat gtatgcggga ggagtgtgtc tcaagtggct ggcattgccg gctttgaggc
      421 tctgcggtcc ttctcaccgt acacggtttg gccgggtcca ggatattcat gtttgtaagc
      481 gcctccaagg acgctgacag tggcggggat accgatgacc aatgggccct ttgataaggc
      541 atagaatctc tgatgggagg ggagaatcta tgtgggtttt gaggtagttt gcccgactag
      601 tatatgcact atatcatgca ctacgcgaaa atttcgaggt taaggtttca aataagcgat
      661 ttagtaagtg tttgatttgg cggagagggc gggattcgaa cccgcgtggg gcgcaaggcc
      721 cccaaccgat ttcgagtcgg tgccgttgtg accgcttcgg tacctctccc gcgacacttt
      781 aatttagact ctctagctga tcactttacc tcaatgggtg actgcagagc aatcgccttc
      841 aagcataagt acgccgcacg tagtcatcca gtatctgctg gaactcctcc gcgatccgct
      901 ccccgcggag cgtaactgcc ttcttgccat cgatgaatac cggcgcggcc ggttcctcac
      961 cggtgccggg cagactgata ccgatattgg cgtgcttact ttcgccgggc ccattcacca
     1021 cacaacccat gacagccagg gtcatgtttt cgacccccag gtagtgctcc cgccagatcg
     1081 gcatctgctc gcgaacatag ctctggatct tatcggcgag ctcctggaaa taggtactgg
     1141 tggtgcgacc gcagccggga catgccgtga ccaggggcgc aaaagaacgc agtcccatgg
     1201 tttggaggag ctcttgcgcc acgatgactt ccctggtgcg atcgccgccg ggttcggggg
     1261 tcagagagac ccggatcgtg tcgccgatcc cttgctgtaa caagaccgcc atgccggcgg
     1321 tcgaggcgac aatgccttta gagcccatgc ccgcctcggt aagcccgaga tgcaaagcgt
     1381 aatcacagcg cgcggcaagc tcggtgtaga cggcaatgag atcctgcacc ccactgacct
     1441 tgcaggaaag cacgatctta tcgcgggcca agccgattgc ctgagcccgc tcggcgctgt
     1501 ctaaggctga cacgatcaat gcctcctggg tgacggcgcg agcctctttg ggctcaggta
     1561 gctgtgcgtt ttcatccatc attcgggtta aaagctcccc atccagactg ccccaattga
     1621 caccgatccg caccggttta gcgtactcga tagcggtttc gatcagggtc gcaaattggc
     1681 tgtcccgctt tctaccaaag ccgacgttgc cggggttgat ccggtatttg gccaaggccc
     1741 gggcgcattc ggggtacttg gtcaataaca tatgcccgtt gtagtgaaaa tcgccgatca
     1801 gcggaacccg gcagccggcc gcatccagca tcgcgcggat cttccctacc tggcgggcgg
     1861 cctcttcggt attgaccgtg atccgaacga gctctgagcc tgcggccgcg agttgctgca
     1921 cctgtcttac ggtggccacg gcatcggccg tatcggtatt ggtcatggat tgcaccataa
     1981 tcggggcggc gcctccaatc atgatggagt ccacctgaac gccgatactg cggcgacggg
     2041 gtataggaga aatcgctgaa gtcgtcattg aggggttaac ctcgtcggtt aatgtgtgct
     2101 gcatagattg aaatcctggg catcgatgaa tccatccatg gtatcttagg aacaggttat
     2161 agtgcaaagt caaacgactg gatcgaatat atgcggatcg ggatcgatct gggcggcacc
     2221 aagattgagg tcattgcctt cggtgataac gggaaggtat tgtttcgcga ccgggttgcg
     2281 acccctcaag aggattattc gggcacctta caggttatag ccgagctggt agtgcgtctg
     2341 gagcgggagt tgggccgaca gggtacggtc gggatcggca tgccgggggc gatctctccg
     2401 gctacaggtc tcgttaaaaa ttccaattcg gtctgcctca atggccgaag attcgaccgc
     2461 gatctcgagc gactgctgcg gcgtccattg aggatcgcca acgacgccaa ttgctttgcc
     2521 ctctcggagg ctactgacgg cgctgcggcg ggggcagagg tggtgttcgg tgtgatcctc
     2581 ggtaccggta cgggaggagg cgtggccgtg cgcggcgcga tcctcgtcgg agccaatgct
     2641 attgctggcg agtgggggca taatcctttg ccttggccgc atcccgagga actcccaggt
     2701 cctccctgct attgcggcaa gagcggttgt atcgagacct acctttcagg gcccggtctt
     2761 gttcgtgatt tcagagccgc cgggggcagg tctatctccg cccttgagat aggggcgcag
     2821 gctgaaagcg gtgatgaata tgctgatgcg gtcttggcgc gctatgaaga taggctggcg
     2881 cgggggttgg cttcggtgat caatatcctg gacccggatg tgatcgtcgt tggcggggga
     2941 ctgtcgaata tcaaaaggct ctatactgag gtgccgcgtc tctggagcca atacgtattc
     3001 tctgacacga tcgccacgcg gttggtccaa gcgcgtttcg gggattcgag tggcgtacgg
     3061 ggtgcggctt ggctatggcc gatagaggat ttgcccatgt gttcttgaat taatcctctt
     3121 cttgccacgg ctcctcttct ggcgatcctt cgccccactc gtcgctctct tcctcttcga
     3181 gttccgcttc ttcttgc
//
LOCUS       DASQSL010002149         1862 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_121807, whole genome shotgun sequence.
ACCESSION   DASQSL010002149 DASQSL010000000
VERSION     DASQSL010002149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1862
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121807"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            120..1163
                     /gene="moaA"
                     /locus_tag="VE844_21605"
     CDS             120..1163
                     /gene="moaA"
                     /locus_tag="VE844_21605"
                     /EC_number="4.1.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013248133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HZC03838.1"
                     /translation="MPETPALTPIADTLSRPLRNLRLSVTDRCNLRCQYCMPEEDYLW
                     LPREDLLSFEEIRELVAIFSELGVDKIRLTGGEPLLRKDLPVLVSMLAACPRIRDLAM
                     TTNGVLLADQAQALYEAGLHRVTVRLDTLRPERFKRLTRRDSHARVLHGIAAVRQVGF
                     PGLKLDTVVIRGTNDDELVDLIEYGKHIGAEVRFIEYMDVGGATQWSFDKVVSRAEIL
                     ERLATHYGRITAIREVSSAPAERFQLPDGTSFGIIASTTTPFCRTCDRSRLTADGMWY
                     LCLYAQQGIDLRTPLRSGASRDELKALIASTWQGRRDRGAEERKELGYRGVLIRLEGL
                     KEDPHLEMHTRGG"
     gene            complement(1192..1608)
                     /locus_tag="VE844_21610"
     CDS             complement(1192..1608)
                     /locus_tag="VE844_21610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03839.1"
                     /translation="MLPYYAICRTDLKGQGGRMAEEQEEARSQPKRPLREWLHLVFPE
                     ARMRVATRRMPRDWFEFMTRIPILERIVIKRFVENLMCDQWLKEPHSALDGLDPTTAA
                     KDGPSRVLLESLLTRMAQNREKTGREMRRIRRRLGM"
BASE COUNT          372 a          573 c          528 g          389 t
ORIGIN      
        1 cccacatgcg cagcgtcgcg ctttacagtg ctgtgtgatg cgcatatact agatacatac
       61 atcataccag tccggtgaac gattcggaaa cggtcggttt attgaggaag tacatacgta
      121 tgccagagac tccagcgctg actcccatag cagacaccct gagcaggccg ctccgcaact
      181 tgcggctttc cgttacggat cgttgtaatc tgcgctgcca gtattgcatg ccggaggagg
      241 actacctctg gctcccccgt gaggacctgc tcagctttga agagatacgc gagcttgtgg
      301 cgattttctc cgagcttgga gtcgacaaga tacgcctcac cggtggggag ccgctgctcc
      361 gtaaagacct gcccgtcttg gtctccatgc tggcggcttg cccgcggatt cgtgacctgg
      421 cgatgacgac caatggcgtt ctcctggccg atcaggcaca agccctgtac gaggcgggtt
      481 tgcatcgcgt cacggtgagg ctcgacacgc tccgccccga gcgtttcaaa cgcttgaccc
      541 gtcgcgattc ccatgccagg gtgctgcacg gcatagcggc ggtgcgccag gtcggtttcc
      601 cgggcttaaa gcttgacacc gtggtcatcc ggggcaccaa tgatgatgag ctcgttgacc
      661 tcattgaata cgggaaacac atcggggccg aagtccgttt tatcgaatac atggacgttg
      721 gaggcgccac ccagtggtcc ttcgacaaag tcgtgtcacg ggcggagatc ctcgaacgcc
      781 tcgcaaccca ttatgggcgg atcaccgcta tccgtgaggt cagctccgcc cccgcggaac
      841 gctttcaact gcccgatggc acgtcgttcg gcatcatcgc ctctaccacg acgccgtttt
      901 gccggacctg tgatcgaagc cgactgacgg ccgatggcat gtggtacctc tgcctttacg
      961 cacagcaggg aattgacctg aggacgccct tacgcagtgg ggcttcgcgg gacgagctca
     1021 aggccctgat cgcttccacc tggcagggac ggcgtgaccg tggcgcggag gaacgcaaag
     1081 agctcgggta ccgaggggta ttgattcggt tggaaggcct gaaagaagat ccgcacctcg
     1141 agatgcacac gcgaggagga tagacagcca cacgcatcat acaccgccga cttacatgcc
     1201 gagccgcctg cgaatccttc gcatctcccg ccccgttttc tcgcggttct gtgccatacg
     1261 cgtgagcagt gactctaaaa ggacacgact aggcccgtct ttcgctgccg tggtcgggtc
     1321 tagcccgtct aaggcgctat gcggctcctt tagccactgg tcgcacatga ggttctcaac
     1381 aaagcgtttg atgacgatgc gctcgaggat gggaattctg gtcatgaatt caaaccaatc
     1441 ccgtggcatg cgacgtgtgg ccacccgcat acgcgcttcc gggaatacga ggtgcagcca
     1501 ttcgcgcagc ggtcgcttcg gctgagatct tgcctcctct tgttcctctg ccattcttcc
     1561 cccctgcccc ttgagatcgg tgcgacaaat cgcgtagtat ggtaacatac ttctagcgaa
     1621 ggctgatttc cttgtcaatt cctaaatgat gaacggacgg cgccttggca aagaggggcc
     1681 ccgtaccgcg ccgccgatct tgctgaggct ttccccgaga gcatcgccgc atccaggagg
     1741 gcatatggct ttccacaatc ccccagacgc cactatcaaa gagatcctat ccacaccacg
     1801 aacgatcgcc gtcgttgggt gctcgccgaa ccccgagcga gacagctatc gcatcgccaa
     1861 gc
//
LOCUS       DASQSL010002150         2379 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_175957, whole genome shotgun sequence.
ACCESSION   DASQSL010002150 DASQSL010000000
VERSION     DASQSL010002150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2379
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175957"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            239..1690
                     /locus_tag="VE844_21615"
     CDS             239..1690
                     /locus_tag="VE844_21615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HZC03840.1"
                     /translation="MDEVRERGGEREESFAPEISSKHLPPVTYRDLPEPRPFWKIVGP
                     GVIVAAGGIGSGEYILWPAITQQVGLGLLWAALFGSIIMFFIATECARYTLATGETII
                     TGFSRLWKPWWIGFILMAVIPNLWPGYATGTGTILTFVLGGGDVILITVLALIAIVLS
                     LTLSPVVYQFMEKAQAVMMAIMLLFIVFAAFIAIRADVWGDFARGFVSVGNIPEGTSI
                     PLLAGAVAFAGAGGTGVLMVSNYVRDKNMGMGLHIPRIVSPITGHEEPGSNIGHFFPQ
                     NEENMSRWRGWWRVANHEQFWTFFLFTIATIAIMSALAYSTVFGQNVGEEFDFIRAEG
                     EALGEVVGPWFTIFFWFTGIIALFSTNLAVWDMVGRISADALKANWLLENRFWTESKL
                     YATVLTFLFVFSVGVLVSGLQEPLILLTIVSVLSGITSFIYCMLIIQLNRFSLPSSVK
                     MGNARLVIMSIAVLFYGFFFLITVLDLLGVFGG"
     gene            1851..2246
                     /locus_tag="VE844_21620"
     CDS             1851..2246
                     /locus_tag="VE844_21620"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HZC03841.1"
                     /translation="MTERRSVEGRPGFEVITAHPEEEYMIVFEMIPEGDAGDEYLAIA
                     AEMNKLVKEQEGFIEIDRARSIYHEDRIFSVSRWESEEAIANWYDNHSHKAAQRMGRE
                     KMFKSFRISRVKVLKTMTMNWPDDRVSKS"
BASE COUNT          468 a          631 c          739 g          541 t
ORIGIN      
        1 tccgggtgcc gaacggttga caacggctca gatgtaagat acgttccatg caagaggact
       61 agtggctaac ccactagtct agctcacgga ggtgtgggga aggtgagcgt atgtgactcg
      121 gataatgcta ctggtcgctc tcatgcggcg tggtggagtc agcacgctag tcgttgtcgt
      181 aagcgaggac gttggtcgtg aggatctggg ttgtgcgtgt cgggaaggag catgaggcat
      241 ggatgaagta agggagcgag gaggcgaaag agaagagtct ttcgctccgg agatatccag
      301 caagcatcta ccgccagtaa cgtatcgaga tcttccagag ccgaggccgt tctggaagat
      361 tgttgggcca ggcgtgatcg tagctgccgg gggcatagga tcgggcgagt acatcctatg
      421 gccggccatc acccaacagg tggggcttgg cctcttgtgg gctgccctgt tcgggtcgat
      481 cataatgttc ttcatcgcca cggagtgcgc gcgttacact ctggcaacgg gcgagaccat
      541 aatcaccggc tttagccggt tgtggaagcc atggtggatc gggtttatcc tcatggcggt
      601 cataccgaac ctctggcccg gttacgccac cggcacgggc acgattctga cattcgtatt
      661 gggcggtggc gacgtcatcc tcatcacggt cttggccctt atcgccattg ttcttagcct
      721 gaccctctcg ccggtggttt accagtttat ggaaaaggcc caagcggtga tgatggccat
      781 catgctcctt tttattgtct tcgcggcgtt tatcgccatc agggcggacg tctggggaga
      841 cttcgctagg ggtttcgtaa gcgttggcaa tataccggaa ggcacctcca tcccgctgct
      901 cgcgggtgcc gttgccttcg ccggggctgg cggcaccggc gtgcttatgg tgagcaatta
      961 cgttcgggac aagaacatgg gaatgggcct ccacattcct cgtatcgtct caccaattac
     1021 cggacatgag gagcccggtt cgaacatcgg gcacttcttc ccacagaacg aggaaaacat
     1081 gagccggtgg aggggctggt ggagggtcgc caaccatgag cagttctgga ccttcttcct
     1141 cttcaccatc gcaaccatcg ccatcatgtc ggccctcgcc tactctacag tattcggcca
     1201 gaacgtcggg gaggaattcg acttcatccg ggccgagggt gaggctctcg gcgaggtcgt
     1261 tgggccgtgg tttacgattt tcttctggtt caccggaatc atagctttgt tctccaccaa
     1321 cctggccgtc tgggatatgg ttggcaggat ctctgccgac gcgctgaagg ccaattggct
     1381 tctcgagaac cggttctgga cagagagcaa gctgtatgct acggtcctca cgttcctctt
     1441 cgtgttcagc gtgggagtac tcgtgagcgg cctgcaagag ccgctgatat tgctcaccat
     1501 cgtctcggtg ctgagcggaa taacgagctt catctactgc atgctgatca tacagctcaa
     1561 ccggttctcg ctgccgagct ccgtcaagat gggcaacgct cgcctggtta tcatgagcat
     1621 cgcggttctg ttctacggtt tcttcttcct catcacggtt ctcgacctgc tcggcgtgtt
     1681 cggcgggtga gccggtgctc aagcagctgg gttttcgcat tttgctggcc ctcacgatct
     1741 gggttttctt gctggcggtt gcgtacctgc ttgggttcct ctgatgcccg gtgccgttta
     1801 ggcccgacgt ctcacgttcg gggggtggtc gaaccttgag gagtgaacgc gtgacggaga
     1861 gaaggtcggt ggaagggcgg cctggtttcg aggtgatcac cgcgcatccg gaagaagagt
     1921 acatgatcgt gttcgagatg attcccgagg gcgatgccgg ggacgaatac ctcgctatcg
     1981 ccgccgaaat gaacaagttg gtaaaggagc aagagggttt catcgagatc gatcgggcac
     2041 gttcgatcta ccacgaagac cgcatattct ccgtgagccg gtgggagtcc gaggaggcga
     2101 tcgccaactg gtacgacaac cactcccaca aggcagccca gaggatggga cgggagaaga
     2161 tgttcaaatc ctttcgcatc agccgcgtga aggtcctgaa gaccatgaca atgaactggc
     2221 cggacgatag ggtgtcaaaa tcatgacgtt ggcctatcgg ggtatggtcg ccgctccgca
     2281 cgcgctggcg tccgaggtcg ctgagtaggg ccttctgaca ccaccgagca cgctacacac
     2341 ggaaacactg ggtagcctcc agcaaagaaa tcagcagca
//
LOCUS       DASQSL010002151         1274 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_175974, whole genome shotgun sequence.
ACCESSION   DASQSL010002151 DASQSL010000000
VERSION     DASQSL010002151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1274
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175974"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            141..389
                     /locus_tag="VE844_21625"
     CDS             141..389
                     /locus_tag="VE844_21625"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03842.1"
                     /translation="MKRRQWDAATKALIVLEGLKGKPVADICTEHQISQSQYYQWRDQ
                     FLAHAGQAFEHHQATKRAARLAQENARLKQLVGELTLE"
     gene            386..1189
                     /locus_tag="VE844_21630"
     CDS             386..1189
                     /locus_tag="VE844_21630"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HZC03843.1"
                     /translation="MKQKRRAAGMTRHRSLRIVQRDADLLPRIQALKVEHPFWGYRRV
                     WAYLRFVAQLSVNQKCILRLMREHHLLVPPNLRLKAKRTPTRSKPRPTKPNAWWGIDM
                     TKVLVSGFGWVYIVVILDWYTKKVVGYYAGLQCPARHWLAALDMAVNRQFPNGARDQG
                     LCLMSDNGCQPTSTAFIRACSRLGIHQAFTSYGNPKGNADTERFIRTLKEECFWLQEW
                     TCPFQLMSAFTDWIDHYNEHYLHSALGYKSPRRFEQDYLNRHGPPFAAA"
BASE COUNT          293 a          373 c          370 g          238 t
ORIGIN      
        1 cgctgctgaa tcccatcgac aaacttcacc ttggcctgga cgagcggcag caggtgcggt
       61 gcgttaagta tactgcaccc catcaagaca tgaggccatg gaacggagta cactgtggct
      121 gacacccaag gaggtcagcc atgaaacgac gccaatggga cgccgccacc aaagccttga
      181 tcgtgcttga gggcctcaag ggcaagccag tcgctgacat ctgcaccgaa catcaaatca
      241 gccaatccca gtactaccaa tggcgcgacc aatttttagc ccatgccggc caagcttttg
      301 agcaccatca ggccaccaag agagcggcgc gcctcgcgca ggagaacgct cggctgaagc
      361 agctcgtcgg ggagcttacc ctggagtgaa acaaaagcga cgcgctgctg ggatgacgcg
      421 gcaccggtcg ctgcgaatcg tccagcggga tgcggacctg ctgccccgca tccaggcact
      481 aaaggtcgag catccgttct ggggctatcg tcgcgtttgg gcctacttgc gcttcgtggc
      541 ccagctgtcg gtcaatcaaa aatgcatcct gcggctcatg cgggagcatc acctcctggt
      601 cccgcccaat ctgcgcttga aagccaagcg gacgccgacc cgcagcaaac cccggccgac
      661 gaagccgaat gcatggtggg gcatcgacat gaccaaggtc ttggtgagcg ggtttggctg
      721 ggtctatatc gtcgtaatcc tggactggta tacgaaaaag gtcgtggggt actacgccgg
      781 cctgcagtgc cccgcgaggc attggctagc agcgctggac atggccgtga accgtcagtt
      841 tcccaacggc gctcgggacc agggcttatg cctgatgagt gataacggct gtcagcctac
      901 ctcgaccgct tttataagag cgtgcagtag gctggggatc catcaagcgt ttaccagcta
      961 cggtaacccg aaagggaacg ccgacacgga gagatttata cgcacgctca aagaggagtg
     1021 cttctggcta caggagtgga cctgcccctt tcagctgatg agtgccttca ccgactggat
     1081 tgatcactac aatgagcatt atttacactc ggcactggga tacaaatccc ctcgacggtt
     1141 tgaacaggac tacctaaacc gccacggtcc tccgttcgcg gctgcttgat tcaggggtag
     1201 cagtacaaac ggccagggct ttgagagcca aggcactaaa cacccggttc aggttggcgg
     1261 caaataaggc atcg
//
LOCUS       DASQSL010002152         1653 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_175979, whole genome shotgun sequence.
ACCESSION   DASQSL010002152 DASQSL010000000
VERSION     DASQSL010002152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175979"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(19..369)
                     /gene="rsfS"
                     /locus_tag="VE844_21635"
     CDS             complement(19..369)
                     /gene="rsfS"
                     /locus_tag="VE844_21635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018623347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HZC03844.1"
                     /translation="MQAEELSQFIAKALDALKADNIQVLDVRGMTSITDYMIVASGRS
                     SRQVRALADKVVEATATVGVKPLGIEGQEPGEWILIDLGDVVVHTMQPATRDFYQLEK
                     LWSESVGEARMKAK"
     gene            complement(359..1015)
                     /gene="nadD"
                     /locus_tag="VE844_21640"
     CDS             complement(359..1015)
                     /gene="nadD"
                     /locus_tag="VE844_21640"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015259279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HZC03845.1"
                     /translation="MKPVGILGGTFDPIHHGHLRLALELYEALDLKQVRLIPLATPPH
                     RLDPIAPARLRLAMLEAAIGDEPALLADDRELRRQGRSYTVDTLSDLRRELADIPVCL
                     LLGMDAFAALHTWHRWQQLIELTHIVVTHRSEAHHLPVTEAVMDLFEPHKTTDLRDLQ
                     RMSAGRIVLQPIPLLDISASRIRALIASGRNPRYLLPEPAIALINQHNLYRNLTPHAS
                     "
     gene            complement(1015..>1653)
                     /locus_tag="VE844_21645"
     CDS             complement(1015..>1653)
                     /locus_tag="VE844_21645"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013031619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HZC03846.1"
                     /translation="GGKELIERISRDARIHVIKHLDGVCHVYIDDRADLDKAVKVAFN
                     AKCQRYGTCNTMETLLVAEAIATPALNRLGPMYREAGVELRGCKATRTILPYAIPALE
                     QDWSTEYLAPILSIRVIKDLDEAIDHIRRYGSQHTDAIVTNDISRAWRFLAEVDSSSV
                     MVNASTRFADGFEYGLGAEIGISTDKFHARGPVGLEGLTSQKFIVNGDGHIR"
BASE COUNT          354 a          472 c          473 g          354 t
ORIGIN      
        1 tcagatagat gcgcatcctt acttggcttt catgcgtgct tcaccgacac tctcgctcca
       61 cagcttttct aactgataaa aatcccgggt cgctggctgc atcgtatgca ccacgacatc
      121 gcccagatcg atcagtatcc attccccagg ttcttgtcct tctatcccta aaggtttaac
      181 acccaccgtt gcggtggctt caacgacttt gtccgccagc gcccggacct ggcgactaga
      241 acggccgctc gccacgatca tgtaatctgt gatgctggtc atcccacgca catccaggac
      301 ctggatgtta tccgctttga gcgcgtctaa ggccttggcg atgaattgag acagttcttc
      361 agcttgcatg aggtgtaagg tttcggtaga gattgtgttg gttgataagc gctatggcag
      421 gctcaggtaa aagataacgg ggattgcgtc cgctggcgat gagcgcgcgg atccgagagg
      481 ccgagatgtc aagcaaaggg ataggctgca atacgatgcg tccggcagac atccgttgga
      541 gatcccgcag atcggtggtc ttatggggtt cgaacagatc catgacggcc tcggtcacgg
      601 gcaggtggtg agcctccgat ctgtgggtga ccacgatatg cgtaagctcg ataagctgct
      661 gccagcgatg ccaggtatgc aaggcggcaa atgcatccat tcccaggagt aggcatacgg
      721 gaatatctgc caattcccgc cgcagatccg acaaggtatc caccgtataa gagcgtccct
      781 gacgccgtag ctcccgatca tccgcgagca aggccggttc atcgccaatc gccgcctcta
      841 gcatggccag gcgaagccga gccggtgcga ttggatctag ccggtggggc ggtgtagcga
      901 gcgggatcaa ccgtacctgc ttgagatcca gcgcctcata taattctagc gccaggcgca
      961 agtgaccgtg gtggatagga tcaaaggtac ccccgaggat acccactggc ttcattaccg
     1021 aatatgaccg tctccgttca cgatgaattt ctgggaggtc aagccttcca ggcccaccgg
     1081 tccacgtgcg tggaacttat cggtgctgat cccaatctcg gcgccgagcc cgtactcaaa
     1141 accatcggca aagcgggtcg aggcgttcac catcaccgag ctcgaatcga cctcggccaa
     1201 aaaacgccag gcgcggctga tatcattggt cacaatcgcg tcggtgtgct gagaaccgta
     1261 gcggcggatg tggtcaatcg cctcatcgag atccttgatc acccggatcg agaggatagg
     1321 ggccaggtat tccgttgacc agtcttgttc tagagccggg atagcatagg ggaggatcgt
     1381 gcgtgtagct ttgcagccgc gcagctcgac accggcctcc cggtacatcg gacccagccg
     1441 gtttaaggca ggcgtagcaa tggcctcggc caccagcaag gtctccatgg tattgcaggt
     1501 cccatagcgc tggcacttgg cattgaaggc tactttcacc gccttgtcga gatcggcgcg
     1561 atcgtcgata tagacgtgac agaccccatc cagatgcttg ataacgtgga tccgggcatc
     1621 ccggctgatg cgctcgatga gttccttgcc acc
//
LOCUS       DASQSL010002153         1857 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_175981, whole genome shotgun sequence.
ACCESSION   DASQSL010002153 DASQSL010000000
VERSION     DASQSL010002153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1857)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1857)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1857
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175981"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            245..940
                     /locus_tag="VE844_21650"
     CDS             245..940
                     /locus_tag="VE844_21650"
                     /inference="COORDINATES: protein motif:HMM:NF025160.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HXXEE domain-containing protein"
                     /protein_id="HZC03847.1"
                     /translation="MTPFKLFRRHWHDVGALSALVAGIYLVVAWADLEVLQRLLILNF
                     IVMLLHQFEEYSWPGGFPAVANLVLMPMGNLSRYLKPLNQVSSAVANCTLAYVFYLLP
                     VFFPHTIWLGLGPVLVGAVVQTIGHCIFVNYRIRSLYSPGVATTIFGFVPVGVAYIYY
                     IQVNGLATGWDWLAAVVYLSVACYLMFYVIEQRIFGGEDPQYPFPEDEMQRGGVAKKL
                     EDAQRIRDEKRTA"
     gene            1198..1710
                     /locus_tag="VE844_21655"
     CDS             1198..1710
                     /locus_tag="VE844_21655"
                     /inference="COORDINATES: protein motif:HMM:NF014376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quercetin 2,3-dioxygenase"
                     /protein_id="HZC03848.1"
                     /translation="MSIKPEGAAQYARRAAPESSVWYLGCLFTVLADSQETGGQYGLI
                     ESLSPKGTEPPRHVHSREDETFYLLEGEITFYIGDETYKATPGMFVSAPRGVPHSYTF
                     DTDVIRMLVLVAPGGFEEFFRPPQSSEPAQAMEPPPPSEAPPDIPAMVAALDQHGVEV
                     VGPPGPPVQG"
BASE COUNT          370 a          551 c          538 g          398 t
ORIGIN      
        1 cttcagtgag gcaatgacgg gcgacttccg cttcggctac agcaggatct ccctctccac
       61 cacgagcatg atgccaccag ccgaacctcg gagccaactt cttagaacgc cgtttgggcg
      121 aagttcgcag aactcccctt ccacgcactc cgctgaataa gggcaagaga aagggccgag
      181 tctactagac cccggcctcg ccttgcgttg ataatgtact caggtcgaaa acgaggaggc
      241 ggaaatgacg cctttcaaat tattccggcg gcattggcac gacgttggtg ccctctcggc
      301 gctggtcgct ggcatctacc tcgtagttgc ttgggctgac cttgaagttc ttcaaagact
      361 tcttattctc aacttcatcg tgatgcttct gcatcaattc gaggagtaca gctggccagg
      421 cgggtttcct gcagtggcga acttggtatt aatgcccatg gggaatttgt cccgctatct
      481 caagccgctg aaccaggtct cgtcagcggt ggccaactgc actcttgcgt atgtgttcta
      541 cttgcttcca gtcttctttc cccacacgat ctggctaggt ttggggcccg tccttgtcgg
      601 cgcagtggtt cagacgatcg gccactgcat cttcgttaac taccggatcc gatctctgta
      661 cagccctggc gtagcaacta ctatttttgg tttcgtgccg gtgggtgtgg cctacattta
      721 ctacatccaa gtaaatgggc tggctaccgg gtgggactgg ttggcagcgg tcgtgtacct
      781 gagcgtcgcc tgctatctca tgttttatgt gattgagcaa cggatattcg ggggcgagga
      841 tccgcagtac ccattcccgg aggacgaaat gcaacgcggc ggcgttgcaa agaagctcga
      901 ggacgcccag cgaatacgag acgagaagcg gacggcctga agatcggctt caaccgctgc
      961 tctgacctgg gatcgcctga gggcgcgggc agcggagata atgcgtacca acgcgcgcac
     1021 gttgcttcgt tcttccctgt cgaacttctg agaactccgt tttccacgca ctcgggcgaa
     1081 taagggcaag agggtcgcgg tctcctgcgg ttttgtgttt tagatcacaa ataggtgtac
     1141 agttgcacgc ggggtggcgg cagagaggaa gcgagcccct acggaaggag agcgaacatg
     1201 tcgatcaaac ccgaaggggc cgcacaatac gcgcgccgag cggcgcctga gtcctccgtg
     1261 tggtatttgg gatgcctctt caccgtactt gccgactcgc aggagaccgg cgggcagtac
     1321 ggcctgatag agagcctgtc gcccaagggc accgagccgc cgcgccacgt tcacagccgg
     1381 gaagacgaga cgttctactt gctggaaggc gagatcacgt tctacatcgg cgacgagacc
     1441 tacaaggcca ctcccggtat gttcgtctcc gcaccgcgcg gggtccctca ctcgtacacc
     1501 ttcgataccg acgtgattcg catgctcgtc ctcgtcgcgc ccggcggttt cgaagagttc
     1561 ttccggcccc cgcaatccag cgagccggct caggcgatgg agcctccgcc gccgtccgaa
     1621 gccccacccg acataccggc gatggtcgct gcactggatc agcacggtgt ggaggtcgtt
     1681 ggcccccccg gcccgccagt gcaagggtag cgcaccccga acttcttaga accttgtaca
     1741 ggcgaagttc gcagaacacc ccttttccac gcacttcggt gaataagggc atgaagaaag
     1801 ggctgaggct gctagagacc ccggcccggt aaatagctaa ctctgtcgcc ctattac
//
LOCUS       DASQSL010002154         1842 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_203774, whole genome shotgun sequence.
ACCESSION   DASQSL010002154 DASQSL010000000
VERSION     DASQSL010002154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1842
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203774"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            285..>1842
                     /locus_tag="VE844_21660"
     CDS             285..>1842
                     /locus_tag="VE844_21660"
                     /inference="COORDINATES: protein motif:HMM:NF017021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HZC03849.1"
                     /translation="MKKLLKIVVSVFGLLIVLVGATGIAIVLLFDPNDYKDQITALIE
                     QRTGRKLTLTGPITLSVFPWLGIEAGALALGNASGFGSEPFLRSNKAAVRVRLLPLFR
                     KTVEMDRLSLQEVRVDLARNKQGKTNWEDLVQSRLGDKPHEGSPLFAAFALGGIEFTN
                     AEVHWQDRLKDEYYSVRGLNLKTSKILPDEPVDLDLSFRAETGKLGIGGIVEIKSTVD
                     HDRAAGRYALVPLDLRARVQGPPIPGGEADIILHTDIEADLNTQLIKLPELVLEAKLA
                     GENLPQGAVDLKLTGRIDADLKNRLAKITDLIIRTLDAEVRGDLEASRILSDVPGLQG
                     HLAVQAPELPTLLKGFGQEALAEKVSAFSAETGFNGTPRKMVLAPLHIKAALTGAHKA
                     PAEVRLEARANIDRDNQTLALDDLSIQGLGLDVKGTAQAQGSLTNPSYRGTFKFAPFN
                     LRELLNRLDQETPLTADPTVLTKVAVDTGLTASSNSLDLKSLSLRLDKSQISGNLSIV
                     DFAKPALKFKL"
BASE COUNT          429 a          507 c          506 g          400 t
ORIGIN      
        1 atccttccat gctgaaaccc agcgggcgtc atctttctga gtgctcctct cacaagctca
       61 tagcgaaagc catcatcggg cattcgcaga agatcatcgg ctgttattgg gcgtgcgtgc
      121 ataagtgcct gagctaactc taaaccttaa ctgcgcctat tgtagtttaa ctcaattggg
      181 aactggacta aaattttacg tcacaaaaaa gggtagggag aaccgtatgg caagcagcct
      241 atggtcgcgg cacccgtagg cgatagtggt aaatggcgat agaaatgaaa aagctgctga
      301 agattgtagt tagtgtattc gggctcctga tcgttttagt cggggctacc ggcatcgcga
      361 tcgtgctgct tttcgatccg aatgactata aagaccagat caccgcgctc atcgagcagc
      421 gtaccgggcg aaagcttact ttgacaggcc cgatcacgct ttcggtattc ccttggctcg
      481 gtatagaagc aggcgccctg gcgcttggga atgcctcggg cttcggtagc gagcccttct
      541 tgagatccaa caaggccgct gtccgggtcc ggttgcttcc cctctttaga aaaaccgttg
      601 agatggaccg gctctcgtta caggaggtta gggtggatct tgctagaaat aagcagggta
      661 agaccaattg ggaggattta gtgcaaagca ggcttggaga taagccgcat gagggatcgc
      721 cgcttttcgc tgcatttgcc cttggaggca ttgagttcac gaatgcagag gtccattggc
      781 aggaccgact caaggatgaa tactactcag tacgcggttt aaatcttaaa accagcaaga
      841 tcctccccga tgaaccggtc gatctggacc tatcgttcag ggctgaaacc ggtaagcttg
      901 ggatcggcgg cattgtcgag ataaaaagca ctgtcgacca tgatcgcgct gctgggcgct
      961 atgcgcttgt gccgcttgat ctgcgtgcac gggtccaggg accgccgatc ccgggagggg
     1021 aggcggatat catcctgcat acagatatcg aggccgatct gaacacgcag cttatcaagc
     1081 tccccgagct tgttctggag gccaagcttg cgggtgaaaa cctgccgcaa ggcgccgtcg
     1141 atcttaaatt gacgggcagg atcgatgccg atctcaagaa ccgcttggcc aagatcaccg
     1201 atctcatcat tcgcacgctc gacgcagagg tgagaggcga tctcgaggca agccgtatcc
     1261 taagtgatgt ccctgggctg cagggccatc tcgcggtcca ggcacctgag ctccctaccc
     1321 tcctcaaagg ctttggacaa gaagctttag cagagaaagt aagcgccttc tcggccgaga
     1381 ccggcttcaa cggcactccc cgaaagatgg ttctggcccc gctgcatatc aaggccgccc
     1441 ttaccggcgc ccacaaagcg ccggccgagg tgcgcttgga ggcacgcgcg aatatcgatc
     1501 gggataatca aaccctggcg ctcgacgatc tgagcatcca gggcctcggg ctcgatgtga
     1561 agggaaccgc gcaggctcaa ggatctttaa ccaacccgag ctaccgggga accttcaagt
     1621 tcgccccgtt caatctgcgc gagctcctta accggcttga ccaggaaaca cccctcaccg
     1681 ccgatcccac ggtcctgact aaagtcgctg tcgacacagg tttgaccgcc tcaagtaata
     1741 gtctggatct caagtcgctg tctttgcggc ttgataaaag ccagatcagc ggcaacctct
     1801 ccatagtcga ttttgctaaa cctgccctca aattcaagct cg
//
LOCUS       DASQSL010002155         1092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_203783, whole genome shotgun sequence.
ACCESSION   DASQSL010002155 DASQSL010000000
VERSION     DASQSL010002155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1092
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203783"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..360)
                     /locus_tag="VE844_21665"
     CDS             complement(<1..360)
                     /locus_tag="VE844_21665"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HZC03850.1"
                     /translation="MAFDTIRYEMQDRILTITFNRPEKLNAFSRELVHETIEAFQLAD
                     ADDEVHLIIVTGAGRAFSAGYDISGGRDESERTPYNWRLHQRENLAFSLQPWQISKPV
                     IAMVNGYCLAGACEFALM"
     gene            complement(600..908)
                     /locus_tag="VE844_21670"
     CDS             complement(600..908)
                     /locus_tag="VE844_21670"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HZC03851.1"
                     /translation="MIMRITWGRIHPGKWNEYEQTYNATVVAKSKNIKGLRGRWLAQD
                     MTDKDAGYAVSLWDSIEDMQAYEASEFYKKEILAPLQPFFINAFTTSRCDVKVTQEFK
                     "
BASE COUNT          213 a          319 c          326 g          234 t
ORIGIN      
        1 catcagcgca aactcgcacg cgcctgccag gcagtagcca ttcaccatgg cgatgaccgg
       61 cttgctgatc tgccagggct gcaggctgaa ggccaaattc tcgcgctggt gcaagcgcca
      121 attgtagggc gtgcgttccg actcatcgcg cccgccagag atgtcatagc cggctgagaa
      181 cgctcgcccg gcgccggtca cgatgatcag atgcacctca tcatccgcat cggcgagttg
      241 gaaggcctcg atggtctcat gcaccaactc tcgactgaag gcgttcaact tctccgggcg
      301 attgaaggtg atggtgagga tacggtcctg catttcatag cgtatggtgt caaaggccac
      361 agcgggtctc ctcctgcgca ggcagtgggt gttcagatgg ccgcagccgg tgatgacagg
      421 gaaaacccgc cccatatatc atagacagct cggaacagcc aagggttttc gccaggcatt
      481 catgcccctt cccccgtcac cgtcctcccc cgcaaagggg gaggacaggg ggtgaacaca
      541 tgccccggag agagggggca ggtgtgctca gggcggtggc gatgagcgac tcgcaccgcc
      601 tatttgaact cttgggtgac cttcacgtcg cagcggctgg tggtaaaggc gttgatgaag
      661 aacggctgca gcggggcaag gatttccttt ttgtaaaact cgcttgcctc gtaggcctgc
      721 atgtcttcga tgctgtccca caagctgacg gcgtagccgg cgtccttatc cgtcatatcc
      781 tgtgccaacc aacgccctcg cagtcccttg atgttcttgc tcttggccac gacggtggcg
      841 ttgtacgttt gctcatattc gttccacttg ccgggatgga ttctgcccca ggtaatccgc
      901 atgatcatgg tcggctctcc tctggaatga tcgcctcgct gctcatctga aaggtgtgcc
      961 ccctttgcag gtattccgcg tcccttgacg ggtcttttgg atcaactgcc tgacaagggg
     1021 aaagggctca gacacgggtg agaaggcagg gcctcacgac aaaacggtga tcggattgaa
     1081 ggcacgcgct ca
//
LOCUS       DASQSL010002156         1109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_203808, whole genome shotgun sequence.
ACCESSION   DASQSL010002156 DASQSL010000000
VERSION     DASQSL010002156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203808"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..791)
                     /locus_tag="VE844_21675"
     CDS             complement(<1..791)
                     /locus_tag="VE844_21675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03852.1"
                     /translation="MSAPILLYVAISYHGFGHIAQTAPIVNELSRRIPRLKVIVQCSA
                     PARVLRNHFTCAFEHLLEAPDIGMAMANSFDVLVDVSYKAYLSLHREWQARIKRKALR
                     LHTLKPALVLANVPYLTLAAAALAGIPAAAVCSLNWAEIFYSYCRGKPYAELIYRQIR
                     EAYSQASVFLTPKPSMPMSGLGNTCSIGPIARQGRDRRSEINERLMLDPNDKLVLIFL
                     GGITTPLAIADWPRLPGINLLMPGTDSVERAGIYTLGEFSSMPLS"
     gene            910..>1109
                     /locus_tag="VE844_21680"
     CDS             910..>1109
                     /locus_tag="VE844_21680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HZC03853.1"
                     /translation="MKSVALLLRYLLLGLLLTGAPFTARAEDEFVEKRQRMVEAIAAL
                     TKETSLETGRAQLDPRVMAVMS"
BASE COUNT          267 a          287 c          326 g          229 t
ORIGIN      
        1 atcgataggg gcatcgagga aaactccccg agggtgtaga tgcccgcccg ttcaacagaa
       61 tcagtgcctg gcataaggag attgatgcct ggtaagcgcg gccagtcggc tattgccaaa
      121 ggagtggtga tcccaccgag aaagatcagg accagcttat cattaggatc gagcatcagc
      181 cgctcattga tctccgacct gcgatctctg ccttgacggg caatcgggcc gatcgagcac
      241 gtattcccaa gcccggacat aggcatactg ggcttggggg tcaagaatac gcttgcttgg
      301 ctataggctt cgcggatctg ccgatagata agctcggcat agggctttcc ccggcaataa
      361 gaataaaaga tctcggccca attcagcgaa cagacggcgg cagccgggat ccccgccagg
      421 gctgctgcag ctagagtaag atagggcacg tttgcgagca cgagcgccgg ctttaatgta
      481 tgcaagcgca aggccttgcg cttgatgcgc gcttgccatt ctcggtgcaa gctgagatag
      541 gccttataac tcacatcgac taacacatcg aacgaatttg ccattgccat gccgatgtcg
      601 ggagcttcca ggaggtgttc gaacgcacag gtaaagtggt ttcggaggac cctggccggt
      661 gccgagcact ggactatgac cttaagccgc ggaatacgcc ggctcagttc attgacgatc
      721 ggcgctgttt gggcgatatg cccaaaaccg tggtaagaga tcgcgacata gaggagaata
      781 ggcgcagaca agaggaatta atacccatgt tgattcgagt caacatttta tatcaaagag
      841 aaacctggat tgacaccccg ctcgggggtt gctagcgttt cggcaaaccc tgatgcattc
      901 caacacctga tgaagtctgt tgctttgtta ctccgttatt tgctcctcgg actcctgctg
      961 acaggagcgc cattcaccgc tcgggccgag gacgagtttg tcgaaaagcg ccagcggatg
     1021 gtggaggcga tcgccgctct taccaaggag accagccttg aaacgggaag ggcgcaattg
     1081 gacccccggg tgatggcggt gatgagcaa
//
LOCUS       DASQSL010002157         1115 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_203844, whole genome shotgun sequence.
ACCESSION   DASQSL010002157 DASQSL010000000
VERSION     DASQSL010002157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1115
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203844"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..631
                     /locus_tag="VE844_21685"
     CDS             <1..631
                     /locus_tag="VE844_21685"
                     /inference="COORDINATES: protein motif:HMM:NF033580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZC03854.1"
                     /translation="LMPHDLGKGMTIYGYFRRWRQQGVWADLMDILRTWERRGQGRKD
                     DPSAGCADSQTIKVTTQHQEVGFDGNKKIKGRKRHTLVDTLGLLLAVVVTAANVDDRQ
                     GFITLLERYLARGGRRLRKIWVDQGYEAQWLKEWAADLKQTHKIDVEVVERQGQGFQV
                     EPHRWKVERTFSWICNDRRNCRDYEALTCNSEAMIQISTIRMLLKRLIS"
     gene            741..>1115
                     /locus_tag="VE844_21690"
     CDS             741..>1115
                     /locus_tag="VE844_21690"
                     /inference="COORDINATES: protein motif:HMM:NF024736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03855.1"
                     /translation="MSTSALYPTSLSDEQWHVVQLMLPEPKWQPGGPGRPPLDLRRVV
                     DGIFYVNKTGCQWRMMPHDFGKGMTIYGYFRRWRQQGVWSDLMDTLRIWQRRGQGHKD
                     DSSSGCADSQTIKVTTQHQEVGF"
BASE COUNT          266 a          288 c          325 g          236 t
ORIGIN      
        1 cctgatgcca cacgacttgg gcaagggcat gaccatctac gggtattttc gtcgctggcg
       61 ccagcagggg gtgtgggccg acctcatgga catccttcgc acctgggagc gccgcggcca
      121 ggggcgaaaa gacgatccct cggcgggctg tgccgatagt caaacaatca aggtgaccac
      181 ccagcatcaa gaggtgggct tcgacggcaa caagaaaatc aaaggtcgca agcgtcatac
      241 cctggtcgat accttggggt tactgctggc ggtggtagtg acggcagcca atgtggacga
      301 tcgtcaaggg ttcatcacgc tgttggagag gtatttggcc cgaggcggtc gacggctgcg
      361 caagatatgg gtggatcagg gctatgaggc ccagtggctc aaggagtggg ccgcagactt
      421 gaaacagaca cacaaaattg acgtcgaggt tgtcgagcgt cagggccaag ggttccaggt
      481 tgaaccgcac cgctggaaag tggaacgcac attttcgtgg atttgcaatg atcgtcgcaa
      541 ctgtcgggat tatgaagcac tgacctgcaa cagcgaggcc atgattcaga tcagcaccat
      601 tcgtatgtta ttgaaacgat tgatctcata attttaaaac ggcctctaaa accctaatcg
      661 tctcgaaaaa tcaagcttga gaatgggtgc tcaatgcgcc aaactcctct ttattttcag
      721 ccgtttaaga ggaagcagcg atgagcacct cagcccttta tccaacgagc ttgagcgatg
      781 agcaatggca tgttgtgcaa ctgatgttac ctgaacccaa gtggcaaccc ggtggacccg
      841 gacgaccgcc cctcgatctt cggcgcgttg tcgatggcat tttctacgtc aataaaaccg
      901 gttgtcagtg gcgcatgatg ccgcatgact tcggcaaggg catgaccatc tatggctatt
      961 ttcgtcgctg gcgccagcag ggcgtgtggt ctgatctcat ggacaccctt cgcatctggc
     1021 aacgccgcgg ccaggggcac aaagacgatt cctcgtcggg ctgtgccgat agtcaaacga
     1081 tcaaggtaac cacccagcat caagaggtgg gcttt
//
LOCUS       DASQSL010002158         1312 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_203862, whole genome shotgun sequence.
ACCESSION   DASQSL010002158 DASQSL010000000
VERSION     DASQSL010002158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1312)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1312)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1312
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203862"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..520
                     /locus_tag="VE844_21695"
     CDS             <1..520
                     /locus_tag="VE844_21695"
                     /inference="COORDINATES: protein motif:HMM:NF013232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="purine phosphorylase"
                     /protein_id="HZC03856.1"
                     /translation="LERTLTAGTLILPTTVTDLTRTFYVDPAWHRRIRGVLKDRLPVR
                     TGTLIQSTEIVTKPEQKVELFTRTGAVAIDMESAAIGEVAAQAGVPFLVVRGIADCQS
                     TPIPRCAVQAIDEYGKMNLVDLWSMLRHEPPQALSSLLRLAWNFRAALLTLRTAVRLI
                     GPGFHYSGITTE"
     gene            539..1141
                     /locus_tag="VE844_21700"
     CDS             539..1141
                     /locus_tag="VE844_21700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HZC03857.1"
                     /translation="MEIKPWDARAAYFLVRPFKDSWVTPNHFTTLRLMAGLGSGVAFA
                     SGHWPNLGACLFVLSNFLDHTDGELARLSGKSSRLGHFYDLACDAIVHILLFVSIGIG
                     LHALGRGVWTVPLGLIAGFGVAAIFHLRNKIEQRLGKTAVRQPRLLGFELEDVLYLLP
                     LVTLLNGLLPFLITAAIGAPIGAVLVTRQFLRMRDPLSSV"
BASE COUNT          262 a          361 c          379 g          310 t
ORIGIN      
        1 gctggaacgg acactcaccg cagggaccct gatcctgccc accacggtaa cggatctcac
       61 ccggacgttt tacgtagacc ctgcctggca ccggcgcatc cgaggcgttc tgaaggatcg
      121 gctgccggta cggacgggga ccctgatcca aagtacggag atagtgacca agcccgagca
      181 aaaagtggaa ctgtttacgc ggacgggggc tgtggccata gatatggaaa gtgcggctat
      241 cggagaagta gctgcgcaag cgggcgtgcc gtttctggtc gtccgcggga tcgccgattg
      301 ccaatcaacg ccgatcccac gctgtgccgt gcaagcaatc gatgaatatg gcaagatgaa
      361 tctagtggat ctgtggtcta tgttgcggca tgagcctcct caagcgctca gttcattgct
      421 gcggctggcc tggaactttc gtgcggcgct cttgaccttg cgcacagccg tgcgtcttat
      481 aggccccggg tttcattata gcggtattac caccgaataa gatcaccggg tgactccgat
      541 ggagataaaa ccctgggatg cacgggcggc ttatttcctt gtccggccat ttaaggacag
      601 ttgggtcacg cctaaccatt ttactaccct caggcttatg gcaggcctgg gatcaggcgt
      661 cgccttcgcc agtggccatt ggcctaatct tggggcatgc ttgttcgtgt tgtccaattt
      721 tctcgatcat accgacggtg agctggctcg gctcagcggc aagagcagcc ggctgggtca
      781 tttctacgac ctcgcctgtg atgcgatcgt ccatattctc ctgtttgtaa gcatcggcat
      841 cggactgcat gcgctcggac gtggggtatg gacggtgcca cttgggctta tcgctggatt
      901 tggggtggct gcgatctttc atctacgcaa taaaatagag cagcgccttg gcaagaccgc
      961 ggttcgccag ccacggctgt taggcttcga actcgaagat gtgctctatc tgctcccgct
     1021 cgtcacgctg ttaaacgggc tcttaccctt tttgatcacg gccgcgatcg gggccccgat
     1081 cggggctgtc ttggttacac ggcaattctt acgcatgcgc gatccccttt caagcgtcta
     1141 aggcagagct cctttcaaga atacgccggt gaagatacag cacttcaggt aaacttaggt
     1201 agcgcatcag ctcagacggc ggtagagttc ttcattcttg cgcaagacgt gatccaccac
     1261 tgctcggagg tcattatctt gggtggcaag aagatcggat accactgcac tt
//
LOCUS       DASQSL010002159         1076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_203907, whole genome shotgun sequence.
ACCESSION   DASQSL010002159 DASQSL010000000
VERSION     DASQSL010002159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203907"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..971)
                     /locus_tag="VE844_21705"
     CDS             complement(<1..971)
                     /locus_tag="VE844_21705"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HZC03858.1"
                     /translation="MRRNGEEQTLDEDVSHKLLDSASDLAARGLRVLMVAEGAGDIPI
                     QDPHGLVALGLLGIRDSLRPTVTAAVRRCWDAGIRLVMITGDHPETARTIAREAGILN
                     GYDGIITGQEIMELSDQELGHRLEAATVIARATPLDKVRIVESLQRLGHTVAMTGDGV
                     NDAPALRLADVGVAMGYGTEVAKQAADVVLANNDFSNLVEILVEGRSFWQRIRRAVGL
                     LVGGNLGELGLITGLVLLGQSAPLTTRQILGVNMISDVLPALAIGLQRPEQRNLASLA
                     REGAGSLEEPLHRDILQRGFCTAAPAIVAYLALRGAGVPVARTVGFA"
BASE COUNT          223 a          355 c          283 g          215 t
ORIGIN      
        1 ctggcaaaac ccaccgtgcg cgccactggc actccagcac ctcgcagtgc taggtaggcc
       61 acaatggctg gtgcggctgt acagaacccc cgctgcagaa tgtcccggtg tagcggctcc
      121 tcaagagagc ccgcgccctc cctggctagg ctggcaagat tgcgctgttc aggccgttgt
      181 aacccaatag ccagcgctgg cagcacatct gaaatcatgt tgacgcccag aatctggcgc
      241 gtagtaaggg gggcggattg cccaagcaga actagacccg taatcaggcc aagctcaccc
      301 aaattacctc ctaccagcag gcccactgcc cggcggatgc gttgccagaa gcttcgccct
      361 tcgaccagga tttccaccag gttcgagaag tcattgttcg ccagcaccac atctgctgcc
      421 tgcttggcga cttcagtgcc atatcccatg gcaactccaa cgtcagcgag gcggagcgca
      481 ggggcatcat tcactccatc accagtcata gctacggtgt ggccaagtcg ctgtaagctc
      541 tccacaatcc gcactttatc caggggcgtt gcccgcgcaa tcaccgtcgc tgcttccaag
      601 cgatggccaa gctcctggtc agagagttcc ataatctcct gaccagttat aattccatca
      661 tacccgttga ggattcccgc ttcccgggcg atggtgcgcg ctgtttcagg atggtcgcct
      721 gtaatcatta ccaagcggat cccagcatcc cagcagcgcc gcactgctgc tgtcactgtt
      781 ggccttaggg aatctctgat gcctagcagc cccagggcaa caagaccatg cgggtcttgg
      841 ataggaatgt ctcctgcacc ttctgccacc atgagcaccc gcaggccacg cgcggcgagg
      901 tcgctggcac tgtctagcag cttatgactt acatcctcgt caagtgtctg ttcctcgccg
      961 ttccgacgca cacgctcaca atatggaagg agcacttcgg gcgcgccctt gatgcacagc
     1021 ctgcccgcag caacagtcgc gtggaaccct cgcactgggt caaagggcac ctcgat
//
LOCUS       DASQSL010002160         1404 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_203926, whole genome shotgun sequence.
ACCESSION   DASQSL010002160 DASQSL010000000
VERSION     DASQSL010002160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1404
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203926"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..604
                     /locus_tag="VE844_21710"
     CDS             <1..604
                     /locus_tag="VE844_21710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012485771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HZC03859.1"
                     /translation="LLAVSKTRTPTAILAVARQSQRRFAENYLQEALPKIEALASEAL
                     EWHFIGTLQSNKTEAIARHFDWVHTLDRAKIATRLNDQRPSSLPPLNVLVQVNIDEEP
                     TKSGIVLDQLPALIEAILHYPHLRLRGLMALPAPRTDFEQQRMPFRRLAKAWAQLRDR
                     GIALDTLSMGTSGDFEAAIAEGATLLRIGTAIFGPREAPP"
     gene            667..>1404
                     /gene="proC"
                     /locus_tag="VE844_21715"
     CDS             667..>1404
                     /gene="proC"
                     /locus_tag="VE844_21715"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018232723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004735 - pyrroline-5-carboxylate
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HZC03860.1"
                     /translation="MKDKTIAFIGCGNMGRCLIGGLIMDGYPADKLRAADPDPHQLEL
                     LSKQFAVVSGTDNRQAVQGADVIVLAVKPPRMKSVATELAGALSSPSPVVISIAAGIR
                     TTALSHWLGEKVPVVRVMPNTPSLVGSGAAALYAMANVTAAQREVTEAILRAVGLTVW
                     LEDESLMDTVTAVSGSGPAYFFLLMELIEKAAVELGLPRDTARLLTLQTAFGAVKMAL
                     ESNVDTATLRAQVTSPGGTTEQALKVFQ"
BASE COUNT          284 a          419 c          413 g          288 t
ORIGIN      
        1 gctgcttgcg gtgagtaaaa cccgcacccc caccgcgatc ctcgctgtgg cgcgtcaaag
       61 ccagcggcga tttgcagaaa actatctgca agaggccctg ccgaagattg aggccctggc
      121 gagcgaggcg ctcgagtggc atttcatcgg caccctacag tccaacaaga ccgaggcgat
      181 cgcacgccac ttcgattggg tccataccct cgaccgtgcc aagattgcca cacggctcaa
      241 cgatcagcga ccatcatccc tgccgccgct caatgtactg gttcaggtta acatcgatga
      301 ggaacccacg aagtcaggaa tagtccttga ccaactcccg gccctgatcg aagcgatcct
      361 gcactatccg cacttacggc tgcgggggtt gatggcgctg ccggcccctc gtactgactt
      421 tgagcagcag cgtatgccgt ttcggcggct ggctaaggca tgggctcagt tgagggatcg
      481 aggtattgcg ctcgatacgc tctccatggg cacctcaggg gacttcgagg cggccatcgc
      541 cgagggcgcc accctccttc ggatcggtac cgccatcttc gggccccggg aggcgccacc
      601 ctaaccgtgc ttttggtgct cggtcttgtt aaactctaat gaaacacgct atagagccac
      661 tcgactatga aagataaaac catcgctttt atcggctgcg gcaatatggg gcgctgcctg
      721 atcgggggtc ttatcatgga cggctatccg gccgataaac tgcgggccgc cgatccggac
      781 ccccaccaat tggagctatt gagtaagcaa tttgcagtag tgagcggaac ggacaatcgc
      841 caggctgtcc aaggtgcaga cgtgatcgtg ctcgcggtaa aacctccgcg gatgaagagt
      901 gttgctaccg agctggcagg cgcactatcg agcccctccc ctgtggtcat ctccattgct
      961 gcagggatcc gcaccaccgc cttatcacat tggctcgggg agaaggtacc cgtggtgcgg
     1021 gtgatgccca ataccccttc cttggtcggc agcggcgcag cggccctgta tgcgatggca
     1081 aatgtgaccg cagcgcagcg cgaagtcact gaggcgatcc tgcgggccgt tgggctaacc
     1141 gtttggctcg aggatgagag cttgatggat acggtgactg cagtctccgg cagcggtccg
     1201 gcgtattttt tcctgctcat ggagttgatc gaaaaggcgg cggttgagct tggtctgcct
     1261 cgcgatacag cgcggctttt gaccttacaa accgcctttg gtgccgttaa aatggccctt
     1321 gaaagcaacg tggatacagc gaccttgcgg gctcaagtta cttcacccgg cggcactacc
     1381 gagcaggcgc tcaaggtatt ccaa
//
LOCUS       DASQSL010002161         1256 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_203973, whole genome shotgun sequence.
ACCESSION   DASQSL010002161 DASQSL010000000
VERSION     DASQSL010002161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1256)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1256)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1256
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203973"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..228
                     /locus_tag="VE844_21720"
     CDS             <1..228
                     /locus_tag="VE844_21720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03861.1"
                     /translation="MPAAAWITLLAVALIVAVVGLSLLKVIAQLRHVSWTLGAIIVGV
                     NAIAYQTRTVPEVIPSVNANLAPVRAMAEQV"
     gene            509..793
                     /locus_tag="VE844_21725"
     CDS             509..793
                     /locus_tag="VE844_21725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011753730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03862.1"
                     /translation="MVLLAAQAPGPNEANLFGWYLGFAIAVVVISVVVALVAPVLVLA
                     ARIARQAPQINAALQQSYRNTLPLADLRQTIDHAEVIIGGLERGRARLGG"
     gene            796..1098
                     /locus_tag="VE844_21730"
     CDS             796..1098
                     /locus_tag="VE844_21730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011753731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03863.1"
                     /translation="MPAGYPPEEITFWWVAIGMAFVVVVVVILLLTTLLASVRSIDRS
                     VVGVRDTLRAIPENTANAALIPITADRVDAVLAEGLQHHLFLTRALTGSGTPTGKG"
BASE COUNT          247 a          347 c          381 g          281 t
ORIGIN      
        1 atgcctgcag ccgcgtggat caccctgctg gccgtcgcac tgatcgtggc cgttgtcggc
       61 ctctcgctgt tgaaggtgat tgctcagctg agacacgtct cgtggacact tggtgcgatc
      121 attgtcggcg tgaatgcgat cgcctaccag acgagaactg tcccggaggt tattccttcg
      181 gtcaacgcca accttgcgcc ggtgcgagct atggcagaac aggtttaggg ccaaagcccc
      241 acgtgaagtg tggcgttgga atcgatccaa ggagtaccta gatgcacgag ttcaactgcg
      301 gccaccagga atgtagttcg caatttacgt cgtccgacaa ggactacctg atgcggcagg
      361 tcgccaatca cctcaaggaa gtccacaacg ttcagacggc gacccagact ctgttgggct
      421 atctggaggc cacttgtgtg acatctacaa ctgaccgcta ggtcttgtga ctccgtagaa
      481 atattgctac cgaaaggagg gctgcgggat ggtgttgctc gcggcacagg cgcccggccc
      541 caatgaggcg aacctgttcg gctggtactt gggattcgcg attgctgtcg tggtcatctc
      601 cgtggtggtc gcactggtag cgccggtcct ggttctcgct gcgcggatcg cgcgtcaagc
      661 cccacagatc aacgcggcgc tgcaacagtc atatcggaac acactcccgt tggcggacct
      721 acggcagacg atcgatcatg ccgaggtcat catcgggggt ctcgaacgcg gacgagcgcg
      781 gttaggaggc tagtgatgcc agctggatat ccgcctgaag aaatcacctt ttggtgggtc
      841 gcgataggta tggccttcgt cgtggtcgtc gtggtgatct tgttgctgac cacactcctg
      901 gcgtcggtaa ggtctatcga ccgaagcgta gtgggtgtac gggataccct acgggccatt
      961 ccggagaaca ccgctaacgc tgcgcttatc cctatcacgg ctgaccgggt cgacgcggtg
     1021 ctggcagagg gcctgcagca tcacctgttc ctgaccaggg ctctgactgg ttcgggaacg
     1081 ccgactggaa agggttaaaa atgcttgtca ccctgacggt agtcgtcatc gcattgttga
     1141 ttgctgttct agcattctac ctattcgtca ttggtgtgct gctcaaccgc atcgccgaca
     1201 atctcgacga ctgcttgggt aacgtgaaaa cgatcgccaa gcaggccgag gtgatt
//
LOCUS       DASQSL010002162         1927 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_41118, whole genome shotgun sequence.
ACCESSION   DASQSL010002162 DASQSL010000000
VERSION     DASQSL010002162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1927
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41118"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            493..>1927
                     /locus_tag="VE844_21735"
     CDS             493..>1927
                     /locus_tag="VE844_21735"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HZC03864.1"
                     /translation="MDHPYDLAVEDVMRSARFLTGFFVAPLLLVLASAFAEPEATLPE
                     PAASPTPPKDIMLVLDNSGSMKKNDPQFLMREMVLAFADGLAPDSRLGLVLFDEKVHL
                     VLGLTAADAPDFKDTIGASLKRLDYSGKLTDIPAGVERAIYELRQLGRPEAKRVILFL
                     TDGIVDLGNETRNFYQARWLRESLVEQAKALGIPIFGIALTEAADFQLIQSVAQASGG
                     DYYRVLAASDIPATLEQIRSRVEAAPAEPQKEPQPEPIAETIPPSEPIPAPAEPVAGT
                     DQPPTTAPESVSGWEKIPAEWRPWLLLAFGFIVLGIVGVVAVGRSRRDKPKLPMPVAM
                     LYDLGSHTKKTAYPLKSITRIGRDKNSDIVIPYNTVSSHHAVIEFRDGLFYLRDLRST
                     NGTFLNTKRVSDTHTIQEVGLKHGDRIRFNACEFGFALAELEDVDVTEFQGAGRRKGT
                     KVRINPALPAASKPGEAPLPGPIVEPIE"
BASE COUNT          421 a          554 c          556 g          396 t
ORIGIN      
        1 ccacagcgcg tggccgcaga cgagcgccac ggcgagaacc agcacggccg cttcgatccc
       61 acagatacgc ataagcaatt cgagcgagat catcactcaa tgcctccggc gcggcgaatg
      121 ctgtgcatga gcaccggcac gctaaaagac ttagccatat gctcgacagt actggacttc
      181 attaagcaac tcgcccaagt tctgccgaac cgtcattgcc gaggcttcgc ggatcatagt
      241 acgtacctca atagctatat catatcaatt gatacgatta gtacaattat aatatcgttg
      301 tttttttcgt ttaccgttac gcaagtttaa cactcagaga aatctcagaa caggacagcc
      361 ctgcgggtgg agccgattgc cctggactaa tgagaccgat actgattaaa taatcagcaa
      421 ttcggctaaa atcatcttat ttggttcgtg agaggcaact gtagcggtta atggatcctt
      481 gatgcaccat tcatggacca tccatatgat ttggccgtgg aggatgtgat gcgatctgct
      541 cgatttctta cgggattttt tgtagccccc ctgcttttgg ttctggcttc ggcgtttgct
      601 gaaccagaag cgacgttgcc cgaaccggca gccagtccga cgccgcccaa agatatcatg
      661 ctggttctcg acaattccgg cagcatgaag aagaacgacc ctcagttcct gatgcgtgaa
      721 atggttttag cgttcgccga tgggctggcg ccggactcca ggcttggact ggttctgttt
      781 gatgagaagg tgcatctggt gctcggtctt acggccgcgg acgcgccgga tttcaaagac
      841 acgatcggcg cgagtctcaa gcgcctcgat tacagtggaa agcttacgga cattcccgcg
      901 ggcgtggaac gcgcgatcta tgagctccgg cagctggggc gtccggaggc caagcgggtc
      961 atcctgtttc tgaccgatgg tatcgtggac ctcggtaatg aaacacggaa tttctatcag
     1021 gcccgctggc tgcgggagag cctggtggaa caggccaagg cgctggggat cccgatcttc
     1081 gggatcgcct tgaccgaagc ggccgatttc cagctgatcc agtctgtcgc ccaggcttcg
     1141 gggggagatt actaccgggt cctggccgcc tccgatatac ccgccacgct tgagcagatc
     1201 cgcagtcggg ttgaagcggc cccagccgag ccccagaaag aaccccagcc cgagccgatc
     1261 gcggaaacca taccgccgag cgagcccatt ccagcgccgg ctgaacccgt agccggtaca
     1321 gaccagcccc ccaccaccgc acccgaatcg gtatcgggct gggagaagat cccggcggaa
     1381 tggcggccgt ggctgctcct tgccttcggg tttatcgtgc ttgggatcgt cggggtagtc
     1441 gcggtgggtc gatcacggcg tgacaaaccc aagctgccga tgcccgtggc gatgctctat
     1501 gacctcggct cgcacactaa gaaaactgct tatccgctca aatctatcac ccgcatcggc
     1561 cgcgataaga acagtgacat cgtcatccct tacaacaccg tatcatcaca ccatgcggtg
     1621 atcgagttcc gtgacgggtt gttctatctg cgggatctgc ggagcaccaa cgggaccttc
     1681 ctgaacacca agagggtcag tgacacccat acgatccagg aggtggggct gaaacacggc
     1741 gaccggatcc gattcaatgc ctgcgaattc gggtttgcac tggcggagct cgaggatgtc
     1801 gatgtcacgg aatttcaggg cgcaggccgg cggaagggga cgaaggtgcg gatcaacccg
     1861 gcgctgccgg cagcgtcaaa gcccggtgaa gcgccgctgc cgggacccat cgtcgagccg
     1921 atcgagc
//
LOCUS       DASQSL010002163         3406 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_204144, whole genome shotgun sequence.
ACCESSION   DASQSL010002163 DASQSL010000000
VERSION     DASQSL010002163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3406
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204144"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..468)
                     /locus_tag="VE844_21740"
     CDS             complement(<1..468)
                     /locus_tag="VE844_21740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018002861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03865.1"
                     /translation="MRLYGGIDLHSNNNVIAIVDESDRVVYQKRLPNDLDTILKRLAP
                     YQSELEGLVVESTYNWYWLVDGLVDAGFTVHLANTAAIKQYEGIKYTDDGSDACLLAH
                     LLGLGILPEGYIYPKEERPVRDLLRKRAQLVRQKVTQILSIENLMTRNTGQSIS"
     gene            965..1249
                     /locus_tag="VE844_21745"
     CDS             965..1249
                     /locus_tag="VE844_21745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020507758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HZC03866.1"
                     /translation="MPRSTNRTARIEARIAPDVLDVVKRAAEIQGRSVSDFVVAAAHE
                     AARQTIETTEIIRLSVEDQRRFVEAILNPPEPTPALRRAFQRHRKLFGIE"
     gene            1246..1764
                     /locus_tag="VE844_21750"
     CDS             1246..1764
                     /locus_tag="VE844_21750"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020173903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HZC03867.1"
                     /translation="MTAPFRLEPLHGQHDRSTFASGEEALDRYFRTQVTQDIRRRIAN
                     CFVAVDVATGQVVAYYTIASASIPTPDLPPEEAKRLPRYPTMPAVRIGRLAVDHRFRG
                     RGLGSALLVDAARKALNAAPAAFALVVDTKNDQAITFYQHHGFRQLASPPGTLFLPLA
                     TAAKILLDPSDL"
     gene            1907..2194
                     /locus_tag="VE844_21755"
     CDS             1907..2194
                     /locus_tag="VE844_21755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6516 family protein"
                     /protein_id="HZC03868.1"
                     /translation="MKARRLLRDRKTLASGALVEMAIWGLPHNTPERPHGLKYRLVYV
                     KEGRRLVGYDNETGKGDHKHIGELEYPYRFVSVDQLLADFWDDVRNYGGEP"
     gene            2191..2535
                     /locus_tag="VE844_21760"
     CDS             2191..2535
                     /locus_tag="VE844_21760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010941219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HZC03869.1"
                     /translation="MRTVTIEISRVEDSMRRFKRAWETGESQGEFISFDSPETLFRQI
                     TTKRWQLVRMLQQGGPMSIRGLARLLKRDVKNVHADVKALIEIGLIEKEGRKIGVPFD
                     EIKIEFVMRRAV"
     gene            complement(2620..2763)
                     /locus_tag="VE844_21765"
     CDS             complement(2620..2763)
                     /locus_tag="VE844_21765"
                     /inference="COORDINATES: protein motif:HMM:NF025120.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HZC03870.1"
                     /translation="MNWFRRTTQPKINDIVQGRIEKCTLDRLVNMLAVVGRRVSQRVD
                     RAA"
     gene            complement(3148..>3406)
                     /locus_tag="VE844_21770"
     CDS             complement(3148..>3406)
                     /locus_tag="VE844_21770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03871.1"
                     /translation="RLLALIIGLIITACALSPQTVINPSGEIKVPVRNALATALHNYR
                     FAVALPGVSAPLAMTVTIEDIRYTPSGAPLVNGESYMEVER"
BASE COUNT          779 a          942 c          940 g          745 t
ORIGIN      
        1 gctgatcgat tgccccgtat tccgcgtcat caggttctcg atacttaaga tctgcgtgac
       61 cttctgccgc accagctgag cgcgcttgcg taataggtca cgcaccggac gctcctcttt
      121 gggatagata tagccttcgg gtaagatccc tagacccagt agatgtgcca gtagacaggc
      181 atccgaacca tcatccgtat atttgatccc ttcatattgt ttgatagcgg ctgtgttcgc
      241 caagtgcacc gtaaagccag catccaccaa accatccacc aaccagtacc aattgtaggt
      301 cgactccacc acgagcccct ctagctcgga ctgataagga gccagtcttt taagaatcgt
      361 atccaaatcg ttgggcaagc gcttctgata taccactcta tcgctctcgt ccacaatcgc
      421 aatcacgttg ttgtttgaat gtagatcaat cccaccgtat agtctcatcg tcggtctcct
      481 cttttgagcg ctaagtttgg gtgtcacttc actcccaaac tgtagccgct cgatggagga
      541 gccggctaga tgattatcag agtaaaaact gcttatatgt aataatatag gtagcgttca
      601 ataaagcaaa aggatttgca aatggccctt ctcccacggc ttggtatacc ttcgatcccc
      661 cagcgcacgt tatccagcgc ggcaataatc gtcaagcctg cttctaggca gacgacatca
      721 ccagttctac ctggaatgcc tgggcgaagc ggtcataggc ctcattcagc cggcggtgga
      781 gatacagcga cacctcggcg ggatcctgtg gcaggccggc acggaggaaa aaccactcgc
      841 gcaagacttc ccattgcgcg tccgcaatga agaaatcatc gaagtggccg aaccgcttac
      901 tatacccgac ttgactttgt ccggttaaat accgtacatt gaaaaccgaa agagaggttc
      961 catgatgccc cgatctacta accgcaccgc acggattgag gcgcgtatcg cgccagacgt
     1021 gctcgacgtt gtcaaacgcg ccgccgaaat ccaaggccgc agcgtcagcg atttcgtggt
     1081 cgctgccgcc cacgaagccg cgcgtcaaac aattgagacc acggaaatca tccggctctc
     1141 ggtggaggat caacggcgct ttgtcgaggc cattctcaat ccgccagagc cgactccggc
     1201 cctccgccgc gccttccaga gacaccgcaa actgttcggt atcgagtgac cgcccctttt
     1261 cgcctcgaac cgttgcatgg gcaacatgat cgttcgacgt tcgccagcgg cgaagaagcg
     1321 ctggatcggt attttcgaac ccaagtgacc caggacattc gtcgccgcat tgccaactgc
     1381 ttcgtggccg ttgacgtggc aaccggccaa gtcgtggcct actacacgat tgcctcggcc
     1441 agtattccaa cgcccgatct tccccccgag gaggcgaagc gcctgccccg ttatccgacg
     1501 atgccagccg tccgcatcgg tcggctggcg gtggatcatc gctttcgtgg acgcgggcta
     1561 gggtcggctt tgctggtgga tgccgcccgt aaagcattaa atgctgctcc cgccgcgttc
     1621 gcgctcgtgg tagacaccaa gaatgaccag gcgattacct tctatcaaca tcacggtttt
     1681 cggcaactcg ccagtccgcc ggggactctc tttcttcccc tcgccactgc tgcaaaaata
     1741 ctgctcgatc cgtccgacct ctaaattgtc atcgttacct gtcggctgga gccctgctca
     1801 gcggccgctg tccgccgtcc ccaggagctt cgctcagggg tggcgcttga tttgatgatt
     1861 tgagcagtga tatcgggttt ggcaaaatgt tggtataatt accaacatga aggcgcggcg
     1921 gctgttgcgg gacaggaaaa cactggcgag cggcgcgctg gtcgaaatgg cgatctgggg
     1981 gttaccgcac aacacgccag aacgtccgca cggcttaaag taccggttgg tgtatgtgaa
     2041 agaaggccga cgtctggtcg gctatgacaa tgagaccggc aagggcgacc acaagcatat
     2101 cggcgaattg gaataccctt accggtttgt ctcggtggac caactgctag ctgatttctg
     2161 ggatgacgtc aggaactatg gaggcgagcc atgaggacag tcacgattga gatttcccgc
     2221 gtggaggatt ccatgcgtag attcaagcgt gcctgggaaa ccggcgaatc gcaaggcgaa
     2281 ttcatcagct ttgatagccc ggaaacgctt ttcaggcaga tcaccacaaa gcgctggcag
     2341 ctagtgcgta tgctgcagca gggtgggccg atgtctatcc ggggattggc tcgcttgctc
     2401 aagcgcgatg tgaaaaacgt gcatgcggat gtgaaggcgc tgatagagat cggcctcatc
     2461 gaaaaagagg gacgcaagat cggtgtgccg ttcgatgaga ttaaaatcga atttgtgatg
     2521 cgacgggcgg tttgagcctc gctcagccgc gcactgattc agaggttcgc tccaccgtta
     2581 ggtgaacagc cgaggtcagg cgtctactga gacctgagat caggcagccc ggtccactct
     2641 ctgcgacacg cggcggccca ccaccgcgag catattcacg agccgatcaa gggtgcattt
     2701 ctcgatccgc ccttgcacga tgtcattgat cttgggctga gtggtgcggc ggaaccaatt
     2761 caagcacact gatgcatcat cgggtcgggg cggggggttg aaagagagca gcgcgcagtt
     2821 taatgattag cgtacaatat gcctattaaa cggcgcgtgg gatgcgctct acagcaacta
     2881 aaaggttatt tcaccgagaa ttgagatgaa ggatacagtt gctattcaat acatcgacga
     2941 gcaaggtaat accaccgcag ttatcgtccc aattgagcta tggcgggagc tttaatcgga
     3001 acgagaaact gcttacttac tgaaatctaa cgctatgaaa cagcgtctta tagaggccaa
     3061 gaaccgtcag gaaggtattc cattcgaggc cgtccatgcc aaaggtggtt ctgccgaatg
     3121 atttcgccat gctacccgga attcgggtta gcgttctact tccatatagg attctccgtt
     3181 gaccaaaggg gcgcctgaag gcgtgtagcg gatgtcttcg atcgtcactg tcatagcgag
     3241 tggcgcggag acgcctggga gtgccaccgc gaagcggtag ttatgcaagg cggtcgccag
     3301 agcattgcgc acggggacct tgatctcacc gctcggattg atcacggtct gggggctcaa
     3361 agcgcaggcg gtgatgatca agcctatgat cagggccaga agccga
//
LOCUS       DASQSL010002164         1778 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_122150, whole genome shotgun sequence.
ACCESSION   DASQSL010002164 DASQSL010000000
VERSION     DASQSL010002164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1778)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1778)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1778
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122150"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            171..>1778
                     /locus_tag="VE844_21775"
     CDS             171..>1778
                     /locus_tag="VE844_21775"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018540032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HZC03872.1"
                     /translation="MTIAHLTGDVSILREDLRAPGWLFAPQGGLTGPQQAAARETALH
                     ALVRLRDRGLGASPEPPGRELLRTITTWAMGADTEDLLPLLAEELVLPDQDPRAPDWT
                     KAELRPDGDFRVAIIGAGFSGLLAGYRLAQVGIPFVIYEKNSDVGGSWFENTYPGCRT
                     DVASHLYNYSFAPKFNWPDHFCTQDVVLEYIRAFAKEYGINEHIRFNTEVTGMQWDDE
                     RLLWHITLRGPRREETVGYHAVISAVGQLNRPRLPDIPGRDSFAGPAFHSAAWDYSVD
                     LAGRRVAVIGTGASAYQFIPEIAKTASEVVIFQRNPPWLRPTPHYHHTVPDSAKWLFQ
                     HLPYYAQWYRFWLFAPGLRGILEGWIVDHDYPPTERAVSVLNEQLRATLLRAMEAQLT
                     DAPELRELVIPQYPVGAKRVLRDNGLWIATLKRDNVRIVPAPIEQVTPAGLIAGDQRF
                     DVDAIIYATGFQASRFLAPMKVTGQGGVDLHELWNGMPQAYLGVTVPQFPNLFCMYGP
                     NTNLVGQGGSIIFFSECAATYILDAIRL"
BASE COUNT          347 a          512 c          518 g          401 t
ORIGIN      
        1 gatgacggtt tccctgcagt ctgtcccgat cagcaatctg ccgcgatcag ctcgacataa
       61 tttccctgga ggtggttgcc atggcgccca gtatgccgat tcaaccaatt actgttaccg
      121 atgacacgtt gcgcgaacac ctagcgagcg cggagatccc tgcgttgttg atgaccatcg
      181 cccatctcac cggcgatgtg tcgattctcc gcgaagacct ccgggcgccg ggctggttgt
      241 ttgcgcccca ggggggattg actggcccgc agcaggcagc cgctcgggag accgcgctgc
      301 acgcccttgt ccggcttcgc gaccgcggcc tcggcgcgtc cccggagccg ccaggccgcg
      361 aactgctgcg cacgatcacg acatgggcta tgggcgccga taccgaggat ctcctaccgc
      421 tgctcgccga agaactcgtg ctccccgacc aggatccaag agcacccgat tggaccaagg
      481 ccgagttaag acccgatgga gattttcgag ttgccatcat cggcgccgga tttagcggct
      541 tgctggctgg ataccgcctc gctcaggtcg gcattccctt cgtcatttat gaaaaaaatt
      601 ccgatgttgg agggagttgg tttgaaaaca cctatccggg ttgccggacc gatgtggcta
      661 gccacctata taactattct tttgctccga agtttaattg gcccgatcac ttttgtactc
      721 aagacgtggt tttagagtac atccgtgctt tcgcgaaaga gtacggcatc aatgagcaca
      781 ttcggttcaa cactgaagtc accggcatgc aatgggatga cgaaaggttg ctctggcata
      841 taacgctgcg cgggccccgc cgagaagaga cggttggcta ccacgctgtc atcagtgccg
      901 ttgggcagtt gaaccggccg cggctcccag acataccagg ccgtgacagt tttgctgggc
      961 cagcgttcca ctcggctgcc tgggattact cggttgacct ggccggtcgg cgcgttgccg
     1021 taatcggcac cggcgcgagt gcgtaccaat ttattcccga gatcgccaag actgcgtccg
     1081 aggttgtgat tttccaacgc aacccgccgt ggttgcggcc tacaccgcat taccatcata
     1141 cggtaccgga cagtgcgaaa tggttgtttc aacacctacc ctattacgcg cagtggtacc
     1201 ggttctggct gtttgctcca ggcctgcggg gaattttgga aggctggatc gtcgaccacg
     1261 actatccgcc caccgagcgc gcggtgtcgg tgttgaacga acagctgcga gccacgctgc
     1321 tgcgggcgat ggaagctcag ttgacggacg caccggaact tcgtgaactc gtgattccgc
     1381 aatatccagt cggagcgaag cgcgtgttgc gggacaatgg cctctggatt gcaacgttaa
     1441 aaagagacaa tgtccggatt gtaccggcgc cgattgagca ggtgacgccg gccggactga
     1501 tcgccggtga ccagagattc gatgtcgacg ccatcatcta tgctaccgga tttcaggcat
     1561 cccgatttct tgctccaatg aaggtgaccg gtcagggtgg cgtcgatttg catgaattgt
     1621 ggaacggcat gccgcaggcc tatcttggcg tgacggtacc gcaatttccg aacctgttct
     1681 gcatgtatgg tccgaacact aaccttgtcg gccagggtgg cagtattatt ttcttttcgg
     1741 agtgcgctgc gacttatatc cttgatgcca tccggctt
//
LOCUS       DASQSL010002165         1027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_176318, whole genome shotgun sequence.
ACCESSION   DASQSL010002165 DASQSL010000000
VERSION     DASQSL010002165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176318"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1027
                     /locus_tag="VE844_21780"
     CDS             <1..>1027
                     /locus_tag="VE844_21780"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HZC03873.1"
                     /translation="QRLHESERQFRALFENTLDAILIASDTGEYVGANDAACDLFGVS
                     LDELLGAKVEDFVRSGEEHQTRLAWQAFLEQGEQEGEFPLYRPDGEMRNLEFKAKAGF
                     LPGRHLSVLRDVTERKRAEEGLRESEATLNSILNSLAEGVLVADTQGHVVFVNSAARS
                     MLGVPEEKPLDELPDPWEGFDLPEAVAHCTRHKESVEAGVRYEETFLRVKLECLVELE
                     QSRGEVLVVIQDLSEGRQLEANQQRFLANAAHQLRTPIMAIVGAAELLATGEDADPTI
                     RRRLLNHIFSEGRRMQRLSEVLLRLSRIGWDRREPDLDIVDLREAGQQATKLMEPLAE
                     SGGIRILT"
BASE COUNT          227 a          279 c          340 g          181 t
ORIGIN      
        1 gcagaggctc catgagagcg agcggcagtt tcgcgctttg ttcgagaaca ccttggacgc
       61 catcctgata gccagcgaca ccggcgagta cgtgggggcg aacgacgccg cctgcgatct
      121 attcggcgta tctttggacg agttgcttgg agccaaggtt gaagatttcg taagatcggg
      181 agaagagcat caaacccgct tggcctggca ggcgttcttg gagcaagggg agcaagaggg
      241 agagttcccg ctatatcgcc ccgatgggga gatgcgcaac ctggagttca aggcgaaagc
      301 cggattcttg ccgggacgcc atctctcagt cctacgggac gttacagaac gcaagcgtgc
      361 cgaggaaggg ctgcgcgaaa gcgaagcaac actcaactcc atactgaaca gcctcgccga
      421 aggcgtgcta gtagctgata cgcaggggca cgtcgtgttc gtaaactcag ccgctcgctc
      481 catgttaggg gtgcccgagg agaagccgct agatgagctg cctgatccct gggaaggctt
      541 tgatctgcca gaggcggtcg cccattgcac caggcacaaa gagagcgtcg aggccggggt
      601 gcgctacgag gaaaccttcc ttcgggtcaa gctggagtgc ctggtcgagc tagaacaaag
      661 tcgtggtgaa gtgctggtgg tgatccaaga cctctcggag ggacgccagc tggaggccaa
      721 tcagcagcgg ttcctggcca acgccgccca ccaactcagg acacccatta tggccatcgt
      781 gggcgccgct gaactgctgg cgaccgggga ggatgcggac ccaactataa ggcgacgcct
      841 cctgaatcac atcttttccg aggggcggcg catgcagcgc ttatcggaag tcctgctacg
      901 cttatcccgg ataggttggg acaggaggga acccgacttg gatatagtgg atctgaggga
      961 agcggggcag caggcgacca agctgatgga gcccctcgct gagagcggcg ggatcaggat
     1021 tctcacc
//
LOCUS       DASQSL010002166         1236 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_204152, whole genome shotgun sequence.
ACCESSION   DASQSL010002166 DASQSL010000000
VERSION     DASQSL010002166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1236
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204152"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            99..>1236
                     /locus_tag="VE844_21785"
     CDS             99..>1236
                     /locus_tag="VE844_21785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03874.1"
                     /translation="MSFSASVLLFRCFYGWAPSSEALQHLILGMGKDSSAYMEQAQAP
                     TDDGEVLIIEVDGKATPTATEAELHKRRGKRHANPHACGCARHRGRAKGACRGKQKRR
                     QPGDKSKNGRSITLVVMYTLKRGDDGRLHGPINKRVWGSYAPRKVMVAWARRQATQRG
                     FPPEADKRIHIVVDGETCLYDGLSALFPQATFALDIRHVEERLWKGGRVLYGPSPDTV
                     AHWVEDQRELLYSGRAAPLVTGLKALKLTRSTRAQRDAAKREALRELIGYLEKRLSMM
                     AYRDLIEADLVIASGIVEGAARYVVGERLEGSGMRWIPERAEALFHLRCIELKGEWER
                     FFAWSYQRWLERMRSGHRVVLRTNQVDALPIEASMEETETQCPQQ"
BASE COUNT          257 a          355 c          386 g          238 t
ORIGIN      
        1 gtggaggcgg cttctacccg ctcgatgcct ggattggcct gacaggagat ggatttagtc
       61 ccttggtgat aagcttagcc acccgcttgg cgacatgcat gagtttttca gcctcggttt
      121 tgctctttcg ctgtttctat ggctgggcgc cttccagtga agcgctccaa catctcatcc
      181 tcggcatggg taaagatagc agtgcctata tggaacaggc gcaagcccca accgacgatg
      241 gcgaggttct catcatcgaa gtcgatggca aagccacgcc aacggcgact gaggctgagc
      301 tccacaaacg ccgtggcaaa cgtcacgcca acccccacgc ctgtgggtgt gcgcggcacc
      361 gaggccgggc caaaggcgcc tgccgaggca agcaaaagcg gcgccaaccc ggcgataaga
      421 gcaaaaatgg acgcagtatc acgctggtgg tgatgtacac cttgaagcga ggcgacgatg
      481 gccgcctgca cggcccgatc aacaagcgcg tatggggcag ttatgcgccc cgcaaagtca
      541 tggtggcctg ggctcgccgg caagccactc agcgggggtt tccacctgaa gcggacaagc
      601 gcattcatat tgtcgtcgat ggcgaaacct gtctctatga cgggctctca gccttatttc
      661 cccaggccac ctttgccttg gacatccgcc acgtcgaaga gcggctttgg aaagggggcc
      721 gggtgctgta tggcccgagt cccgacacgg tggcccactg ggtggaagac caacgcgagt
      781 tgctctatag cggccgcgcc gccccactcg tcactggact caaagccttg aagctcaccc
      841 gatcgacccg ggcccagcgc gatgcggcca agcgagaagc cctgcgtgag ctcattggct
      901 atttggaaaa gcgtctgtcc atgatggcct accgggacct gatcgaagcc gacctggtga
      961 ttgcctcggg tattgttgag ggggcggcac gctatgtcgt gggcgaacgg ctcgagggta
     1021 gtggcatgcg ctggatacca gagcgagcgg aagccttatt ccatcttcgc tgtatcgaac
     1081 tcaaggggga gtgggagcgt ttctttgcgt ggagctacca acgctggctg gagcgcatgc
     1141 gatctggtca ccgggttgtg cttcgaacca accaagtgga tgccttacca atagaggcgt
     1201 caatggagga aacggagaca caatgtcctc agcagg
//
LOCUS       DASQSL010002167         1322 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_41132, whole genome shotgun sequence.
ACCESSION   DASQSL010002167 DASQSL010000000
VERSION     DASQSL010002167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1322
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41132"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(291..827)
                     /locus_tag="VE844_21790"
     CDS             complement(291..827)
                     /locus_tag="VE844_21790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015123595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HZC03875.1"
                     /translation="MRKIVVTEFVSLDGVMEEPRWTFKYWNDEIAKFKGEESSASDAL
                     LLGRVTYQGFAAAWPESTDEGAPYFNSVRKYVVSTTLDTVEWNNSTLIKDHIVEAITN
                     LKQQDGKGITVHGSATLVRTLMQHGLVDRYRLLVYPVIVGKGKRLFKEGIPATLKLLE
                     SQSFSSGVVALVYEPDRK"
     gene            complement(909..>1322)
                     /locus_tag="VE844_21795"
     CDS             complement(909..>1322)
                     /locus_tag="VE844_21795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011565260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC03876.1"
                     /translation="RDRQDATLLEASSNSFWLHGSAWELPTFENADVFVGRLIRQGIL
                     VRDPVVEAAIQGHTPDMSIRSLQYRFLHATGLTHKTIQQIERARSAVSLLEQGTPVLD
                     TAFELGYLDQAHLTNSLKRFIGKTPTQIARKSIVG"
BASE COUNT          275 a          393 c          347 g          307 t
ORIGIN      
        1 tctcgatcgg cgaaagagcg gatcttgtcc cggatctcgc gctcctcgtc cgtgagcagc
       61 tcgtccagta gatagtagtc ggtccccagg gaccgggtga catcggctat caatggctgc
      121 aacggcctcc tccttttgtt cgtcgcgcca acctgataca cgcctttata ctttttcact
      181 ctagcatggc cgtcaccttc cgtcgccgtg cgggcaaccg acccagcagg taacgagggg
      241 acctcttctg cgctgagcgt gaccatcttc aaatccagca tcgcccacta ttatttgcga
      301 tccggctcat agacgagcgc cacaacgcct gagctgaacg actgtgattc cagaagcttc
      361 aaagtcgcag ggataccctc tttaaacagg cgcttgcctt tgcccacaat caccgggtag
      421 acaagaagcc gatagcgatc cacaagaccg tgctgcatga gcgttcgcac aagcgtggcg
      481 ctgccgtgga ccgtaatgcc cttaccgtcc tgctgcttga ggttggtgat ggcttccacg
      541 atatggtcct tgatcagcgt ggagttgttc cactccaccg tgtccagggt cgtcgacacc
      601 acgtatttcc gcacgctgtt gaagtacggc gccccttcat cagtgctctc cggccaggct
      661 gctgcaaacc cttgataggt cacgcgtccc aggagcaagg catcgctggc ggacgactct
      721 tcgcctttaa acttcgcgat ctcgtcattc cagtacttga acgtccaccg tggctcttcc
      781 ataacgccat ccagtgacac gaattcggtg acgactattt tccgcatgat gttctccttt
      841 tgccgttcgc tgtctatacc gtaatcttag cgaagcaaga ggacagagcc ttggaaaaaa
      901 accgcaaact acccaactat gcttttccga gcgatttgcg tgggcgtttt tccgatgaag
      961 cgcttcagcg aattggtcag atgtgcctga tcgagatagc ctagctcgaa ggcagtgtct
     1021 aaaacgggtg taccttgctc aagcagcgag acggcgctgc gggcgcgttc gatctgctga
     1081 atcgtcttgt gggttaaccc ggtagcatgc aagaagcggt actgtaaaga gcgtatcgac
     1141 atgtcgggcg tgtgtccctg tatcgccgcc tcgaccaccg gatcgcgcac gagtatcccc
     1201 tgacggataa gcctgcctac aaacacgtcg gcgttttcaa aggtcggaag ttcccacgcg
     1261 gagccatgca gccagaagga attgctcgag gcttcaagta gggtcgcatc ctgtctatcc
     1321 cg
//
LOCUS       DASQSL010002168         2008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_204197, whole genome shotgun sequence.
ACCESSION   DASQSL010002168 DASQSL010000000
VERSION     DASQSL010002168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2008
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204197"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(97..684)
                     /locus_tag="VE844_21800"
     CDS             complement(97..684)
                     /locus_tag="VE844_21800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03877.1"
                     /translation="MASPSLIRWGGLAALLAGAFFIVEALAVPFIGDVHWAFHALDFP
                     AHAFLAVGLVGLYLWQKRQERFGWLGTIGVILIVTASVLIALGGLAIVIVDGVLKAPE
                     EALNEVVHPLELLVIIGAVLFGMATMQMNVLPSGGAQLIIVGALGFFGISFAGVGPEW
                     LISVAVAVLGVGWAWLGYALLLKIGRSAQQPKRVR"
     gene            complement(760..>2008)
                     /locus_tag="VE844_21805"
     CDS             complement(760..>2008)
                     /locus_tag="VE844_21805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03878.1"
                     /translation="LLCVALISFGLLVHFLASPIPTTDTPPALTVLFRVLSLAFPTVG
                     ALIASRRPENPIGWIFCGTGLLTGVQAFASGYAEYAMIGHTGSLPGGEFMAWISQWIG
                     VPTVPLAGALLIVLFPNGKLLSRNWRPVVWMAACGTVMLTLWAALGPGPMSFQPTFDN
                     PLGRGGAIGELGPTESSPMFDRPGFARPADTAITAEGGVNTLGRVGIFIVLVSWLFAV
                     AAMIMRIDQARGAERQQLKWFVYGVAVLVVGFLAAFLGFGLHSVAWFLGIAAFNFLPV
                     AAGIAILRYRLYDIDFLINRTLVYSALTAALALVYVGSIVLLQGLFRAITGENSQLAV
                     VVSTLAIAALFVPLRRRVQMFIDRRFYRRKYDVVKTLQAFNAKLRDDIDLDNVADDLV
                     EVAKETMQPTHVSLWLRPPERKE"
BASE COUNT          491 a          600 c          534 g          383 t
ORIGIN      
        1 cctctcggtg gtagatcagg gcgcagccac agcgagacgt aggccggttg catcgcttcc
       61 taaccaacga gggcagctcg ttggttagcg cgtcgatcac ctcacacgct tgggttgctg
      121 tgccgaccta ccaattttca acaagagggc gtaccccaac cacgcccacc ctacacctaa
      181 taccgccact gctaccgaga taagccattc tggtccaacg ccagcaaagg atatcccaaa
      241 gaaccccagt gcaccgacta tgatcagctg tgctcctccg cttggtaaga cgttcatctg
      301 catggtggcc ataccgaaaa gcaccgcgcc tataatcacc agtagctcta gtgggtgaac
      361 aacttcattt aacgcctctt ccggagcctt aaggacacca tcaacgatga cgatggcgag
      421 gccaccgagg gctatcagca cggaggcggt aacgatcaga ataacaccta tcgtccctaa
      481 ccacccaaag cgttcttgcc ttttctgcca gagataaagg cctaccagtc ccactgccaa
      541 gaatgcgtgg gcggggaagt ctagcgcgtg gaatgcccaa tgcacatccc cgatgaacgg
      601 aactgccagg gcttccacaa tgaaaaacgc cccagccaac agggccgcca gtcctcccca
      661 tcggataagg cttggtgatg ccatacgcgc ttccctcctt ctcccaactc ttttgtcccg
      721 ccttgctaag cgatcgttac gacaaatctt ggagaaatct cattccttcc tctccggtgg
      781 gcgtaaccac aatgagacat gcgtcggctg catcgtttct ttggccacct ctactaggtc
      841 atcggcaacg ttatcaaggt ctatgtcgtc gcgcagcttg gcgttgaatg cttgcagggt
      901 ctttactaca tcgtacttac ggcggtagaa gcggcgatct atgaacatct gtactctccg
      961 gcgcaggggt acgaacaacg cggctattgc cagggtggaa accacaacgg caagctggga
     1021 gttttcacca gtaatggcgc ggaatagtcc ttggagcaga acgatgctac cgacatacac
     1081 cagcgccagc gctgccgtta gcgcactgta tacgagggtg cggtttatga gaaagtctat
     1141 gtcgtagagg cgatatctga gtatggctat gccagcggca acaggcagga aattgaaagc
     1201 agctatgccc agaaaccagg ccaccgaatg cagtccgaat ccaaggaagg ctgctaggaa
     1261 accgacgacc agtacggcaa cgccgtacac gaaccatttg agctgctgac gttctgcccc
     1321 tctcgcttga tctatgcgca tgatcattgc cgcaacggcg aaaagccaac tcacaagaac
     1381 gatgaaaatg ccgactctac ctaatgtgtt cactccgcct tcggcggtaa tggcagtgtc
     1441 agcaggccta gcaaagcctg gccgatcaaa catcggactc gactctgtcg gccccaattc
     1501 gccgatagcc ccaccgcgcc cgagtgggtt gtcgaaggtc ggttgaaaag acatgggacc
     1561 tggccctagc gcagcccaaa gggtgagcat cacggtcccg caagccgcca tccacaccac
     1621 gggccgccaa ttcctagata gcagcttgcc gttaggaaac agcacaatca acagcgcccc
     1681 ggctaggggt acggtcggta ccccgatcca ctgtgagatc caagccatga actctccacc
     1741 gggcagcgaa ccggtatgcc cgatcatcgc gtactctgcg tatccgctag cgaaggcttg
     1801 tactccggta aggaggcccg tcccgcagaa gatccagccg atggggttct cggggcggcg
     1861 cgaggcgatc aacgctccga ccgtggggaa cgccaatgac agtaccctga aaagcacggt
     1921 taaggccggt ggtgtgtctg tcgtcgggat cggagaagcg aggaagtgaa ctagcaaacc
     1981 gaaggagatt agggctacac agagcagc
//
LOCUS       DASQSL010002169         2206 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_41179, whole genome shotgun sequence.
ACCESSION   DASQSL010002169 DASQSL010000000
VERSION     DASQSL010002169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2206
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41179"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..233)
                     /locus_tag="VE844_21810"
                     /pseudo
     CDS             complement(1..233)
                     /locus_tag="VE844_21810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933337.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            342..1451
                     /locus_tag="VE844_21815"
     CDS             342..1451
                     /locus_tag="VE844_21815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03879.1"
                     /translation="MNLLESPFGKESLREEELNMERVSVKAFWASVEQRLAECSPDEL
                     RTILRAMARATSPAERQRFLDQLQVVEEATPAAQSVLQPEELLTDIDDFLHEFQAAMK
                     RADDWEERYGWGGYDEEDSLGPYAEFVEPLARLFDRIAATFDYGNLTLARAAYEKLFG
                     VFDLEDDYGRGIEAGDLERVEVREACARYLRAVYEAVPLPQRPQALFEQIQLAQGGLP
                     SPLPDQDQFLSDWIAFLRKQTGRDVDTWLREAIRLSQGTPGLEGLARAEGKQRPRAYL
                     DWFAALEREGKHREILAAAQEALQSLPGQLPIRAIVADYLCSAARQLNETGALGAGRW
                     DAFVAKPTLVRLLDLWDASPPGKNVQGRCDEPPNG"
     gene            1612..2097
                     /locus_tag="VE844_21820"
     CDS             1612..2097
                     /locus_tag="VE844_21820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03880.1"
                     /translation="MESQWQRPGVGGVMLPCRNVREVPGQLPPNLTQLWQWGLQNSIG
                     FAGEANHAEASLVKRLESIYVECLPRVLLSPGKQVEFLSWCLEIAKLRVNSIVSNQHR
                     GSYDKAAVLIAGCAEVLRLGRRDQEAEAMLEDVRLGFSRHRTFQAELKAAVQRMGLSL
                     Q"
BASE COUNT          459 a          579 c          731 g          437 t
ORIGIN      
        1 tgacggtcga agagatcctc tcggaactgg ataatggtca ccagggccaa gcgccaaggt
       61 ggtagtgccg gttgaccctc cttgggaaac aggtccgcga aatcctcgtc ctagaaaatg
      121 ggccccagtt tgtcccgaag ggccatatac acattgccct tcggaaaggc ggctcgcgcc
      181 acccgaacgg tctcttctgg aacagggtga accggtcttg gcttgagaga catcgtctac
      241 ctccccttgg attgacactg ggaatggatc atcttagcct gaacttaatt catgatttcg
      301 acgggcgcaa gctttcctgg atcaggttca cggacagtgg gatgaatctg ttggagagcc
      361 cctttggcaa agaatccctg agggaggaag agctgaacat ggaaagggtg tcggtcaagg
      421 ccttctgggc gtcggtggag caacggctgg ctgagtgctc tcctgatgaa ctgcgcacca
      481 ttttgagggc catggcacgg gcgacgtcgc ccgcggaacg gcagaggttt ctggaccaat
      541 tgcaggtggt ggaggaagct acaccggctg cccaaagtgt gctgcagccg gaggagttgc
      601 tgacggacat tgatgacttt ctccacgaat ttcaggcggc aatgaagcgg gcagatgact
      661 gggaagagcg gtatgggtgg ggtggatatg acgaggaaga tagcctagga ccttacgcgg
      721 agttcgtgga gccactggcc aggttgttcg accggatagc agcgaccttc gattacggca
      781 atttgacgct tgcccgcgct gcctacgaaa aactttttgg tgtgttcgat cttgaagatg
      841 actacgggcg ggggatagag gcaggggacc tggagagggt ggaggtgagg gaagcctgcg
      901 cccgttatct gcgtgccgtc tacgaagccg tgccactccc gcagcgtcca caggcactgt
      961 ttgagcagat acaactggcc caagggggtc tgcccagccc gctgcccgac caggaccagt
     1021 tcctttcaga ctggatcgcc ttcttgagaa agcagacggg cagggatgtt gacacctggc
     1081 tccgcgaggc cattcgcctc tcccagggca cgccggggct ggaagggctg gcacgggcag
     1141 agggaaagca gcgcccccgt gcctatctgg actggtttgc tgccctggaa agggagggca
     1201 aacaccgaga gattctcgct gctgcccagg aagccctgca gagccttccc ggtcaactcc
     1261 ccattcgggc tatcgtggcc gactacctgt gctctgccgc caggcaactg aacgagaccg
     1321 gggccctggg tgctgggcga tgggacgcgt tcgtggctaa gccgaccctg gtgcgtctac
     1381 tggacttgtg ggatgcgtcc ccaccaggaa agaacgtaca gggcagatgc gacgagccgc
     1441 ccaacgggtg aaggattacc ttgcccacgc gccccgtggg ttcatggaag catgggagga
     1501 cgacctggaa cgaccggcgt ggagtaacaa gtctgtcctg gcccacgctt acctgctggc
     1561 cgaggattgg gatgcagccc accaactggc tgccgacgag caggtgttag ggtggagtcg
     1621 cagtggcaac gcccaggggt tggtggtgtc atgcttcctt gcaggaatgt ccgggaagtg
     1681 ccgggccagt tgcccccgaa cctcacccag ctgtggcagt gggggctaca aaacagtata
     1741 gggtttgcag gtgaggcaaa ccatgcggag gccagcctgg tcaaacggtt agagagcata
     1801 tacgtcgagt gcttgcccag ggtgctcttg agccctggca agcaggtgga attcctgtcc
     1861 tggtgtctgg agatagcgaa gctacgggtc aactctattg tcagtaatca gcatcggggc
     1921 agttatgaca aagccgccgt gctgattgct gggtgcgctg aggtgctgcg actggggaga
     1981 agggaccagg aagcagaggc gatgctggag gatgtacgcc ttggtttctc ccgccatcgg
     2041 acctttcaag ccgagttgaa ggcggcagtg cagcgtatgg ggcttagcct acagtgaagt
     2101 acaaggggac catcgccaag gtccacatgg cttaggtcag ctccctatcg ccgggttatc
     2161 aggcattcta gttcgccaac agtatcgggt ccttttaagg attgac
//
LOCUS       DASQSL010002170         1423 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_176381, whole genome shotgun sequence.
ACCESSION   DASQSL010002170 DASQSL010000000
VERSION     DASQSL010002170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1423
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176381"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            146..736
                     /locus_tag="VE844_21825"
     CDS             146..736
                     /locus_tag="VE844_21825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03881.1"
                     /translation="MRKSMLLAAMVALALVAAAPAVAQIAQETEQEDVESGGAAPVTE
                     IANKGNNVNLCAAVLQQAQSGNVQNVQGTTQYETELDDIEFEGSTITITPEQVSECTQ
                     TIEQAAAAAAAPKGEAKAPAPKAEAKAGKAEAKAEAPKAEAKAGKAEAKAKAEAKAKP
                     KELPPTGGVAGVASLVGLGAGALLVAGGLIARRIIR"
     gene            954..>1423
                     /locus_tag="VE844_21830"
     CDS             954..>1423
                     /locus_tag="VE844_21830"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HZC03882.1"
                     /translation="MKPSGSHQKNPLSNARRSATEPVRTEETLRFQKALLEAQSEASI
                     DGILVVSTEGKMISFNRRFVQMWGIPEEVIASRSDEAALQWALDKLVDPQEFLARVAY
                     LYEHPGEESRDEIVLKDGRTFDRYSAPVRDKDGTYYGRVWYFRDVTERKQAEEKL"
BASE COUNT          324 a          381 c          466 g          252 t
ORIGIN      
        1 aactatcagt aaggttagat taaacgttac caagtttgag aaaatttctt tccccgagcc
       61 ttgtataacc cctggatttc gggtatggat gggcgcgcaa gcactacata ttgtgcattt
      121 tgcgaataaa ggaggtcttt agaagttgag aaagtcgatg ttattggcag cgatggtggc
      181 gctggcgctg gtggctgccg ccccggctgt ggcccagatc gcccaggaga ccgagcagga
      241 ggatgtagag agcggtggcg ctgcgccggt gaccgagatc gcaaacaagg gtaacaacgt
      301 aaacctgtgc gcggcggtcc tgcagcaggc ccagtcgggc aacgtccaga acgtgcaggg
      361 caccacccag tacgagaccg agctcgacga catagagttt gagggcagca cgatcacgat
      421 aacccccgag caggtaagtg agtgcacgca gacgatcgag caggccgcag cagccgcagc
      481 agcccctaag ggcgaggcga aggccccagc gcctaaggcg gaggccaagg ctggcaaggc
      541 agaggctaag gccgaggcac ccaaggcaga agctaaggcc ggcaaggctg aggctaaggc
      601 caaggccgag gcgaaggcca agcccaagga gcttccgccc accggtggtg ttgccggtgt
      661 cgcctctctg gtggggcttg gtgccggtgc tctgctggtg gctggcgggc tcatcgctcg
      721 caggatcatc cgttaaaggg cggcacgcac cgaggaagta gtagctagtc gaacctgagg
      781 aagaaggggg cgggcctcgg aaggggtctg ccccctttat ctcggttgaa gacgcgtaag
      841 ggcttgtggg gtaagtgctg tcctgctggg gaacttctcc acgtagacgg acaagctatg
      901 cttttgtaga ctctattatt aactttttgt ccagaatcga ggcactaccg agcgtgaaac
      961 cttcgggatc ccatcagaaa aaccctctaa gtaatgctcg tcgtagcgcc acagagcctg
     1021 tccggaccga ggagacgctg cgcttccaga aggccctgct ggaggcccag agcgaggctt
     1081 cgatagacgg cattcttgtc gtctccaccg aagggaagat gatctccttc aaccgccgct
     1141 tcgtgcagat gtggggcatc cccgaggaag tgatcgcaag ccgctcggac gaggccgcgc
     1201 tgcaatgggc actggacaaa ctggtcgatc cgcaggaatt tctggcgcgg gtggcctacc
     1261 tctacgagca tccgggcgag gagagccgcg acgaaatcgt gctaaaggac ggccggacct
     1321 tcgatcgcta cagcgcgccg gtcagggaca aagacggtac ctattatggt cgggtgtggt
     1381 acttccgcga tgtcaccgag cgcaaacagg ccgaagagaa act
//
LOCUS       DASQSL010002171         1436 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_122229, whole genome shotgun sequence.
ACCESSION   DASQSL010002171 DASQSL010000000
VERSION     DASQSL010002171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1436)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1436)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1436
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122229"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(329..1270)
                     /locus_tag="VE844_21835"
     CDS             complement(329..1270)
                     /locus_tag="VE844_21835"
                     /inference="COORDINATES: protein motif:HMM:NF033564.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
                     /protein_id="HZC03883.1"
                     /translation="MSTPMNASIVEHFQDLEDPRIDRAKKHNLLDIIIIAVCTLLTGG
                     EGFQDMELFGKSKRPWLQTFLALPNGIPSHDTFGRVFARLNPQRFHACFLSWTQSVAA
                     LTHGALVSLDGKTVRASFDRATASSPLHMLSAWCSHNGGLVVGQLKTDSRSHEITAIP
                     ALLQLLAIKGCIVSIDAMGCQTAIADQILGQGGDYLLALKCNHKKTYATVTQHFHQHI
                     EHHLAWQNAENFFDVFDDSHGRLVRRRVWTMTELEPLPALAKWPGLHTVIAVETMRTA
                     HQHAPVTSDYRFYLSSLERSAEAFATMIRQHWDIENT"
BASE COUNT          311 a          369 c          454 g          302 t
ORIGIN      
        1 cagcaactcc ggcaacatcg cggcgatatg accagcttgc acacgcgccc cattcccggc
       61 cgccccgccc gcctgagtgt tgagcagtgg cagcgtgtac tggccatccc agggtgatcg
      121 cattttaggt tgctccagag atcacagtca gcaggtagct ctcgtccaga gagcatacga
      181 gccttttttg tcggaggctg atcgggtgtg agcgatcttg gcgcaacaga tggagagcga
      241 ttcgtcgcaa ggccgccata ttttcggggg catgtgccgt ccggatgcga gaacggtctt
      301 cattgaaggt gacatcgagc gaccagtgtc acgtattctc aatatcccaa tgctgacgaa
      361 tcatcgtggc aaacgcctca gcggaccgct ccaggctgga aaggtagaag cggtaatcgc
      421 tggtgacggg cgcgtgctgg tgggccgtcc gcatcgtttc cacggcaatc accgtgtgga
      481 gaccaggcca tttcgccagt gcaggcaggg gctccagctc tgtcatggtc cagacccgtc
      541 tgcgcaccag gcggccgtgc gagtcatcga agacatcaaa gaaattctcg gcattctgcc
      601 aggccagatg gtgctcgatg tgctgatgaa agtgctgggt gaccgtagcg taggtctttt
      661 tgtgattgca cttcaaggcc aagagatagt cgcctccttg gccgaggatc tggtcagcga
      721 tagcggtctg acatcccatt gcatcgatgg agacgataca gcctttaatg gcaagtaatt
      781 ggagcagtgc cggaatggcc gtgatctcat gagacctact gtctgtcttg agttggccga
      841 cgacgagccc gccgttgtgt gagcaccagg cggagagcat gtgcagcggt gaggacgccg
      901 tggcccgatc aaaggacgcc cgcacggttt tcccatcgag tgagacgagg gccccgtggg
      961 tgagggcagc gaccgattgg gtccaggaca ggaaacaggc gtgaaaacgc tgggggttga
     1021 ggcgggcaaa cacccggccg aaggtgtcat gcgagggaat gccgttcggc aaagcgagga
     1081 aagtttggag ccatgggcgc ttgctcttgc caaagagctc catatcctgg aagccttccc
     1141 cgccggtcag aagtgtgcac acggcaatga taatgatatc gaggaggttg tgcttcttgg
     1201 ctcgatcgat gcgtgggtct tccaagtctt ggaaatgctc gacgatcgag gcattcatgg
     1261 gggtagacat acaaggtgct cctccttata agtgataaga ggagcatagc agaggggaga
     1321 tggacagggg cgaaatcttc gcaattaaaa tgcgatcacc ctgggcgatc accctgatcc
     1381 gaccgtttgt ggcagcactg aaagtttctg cttgtctatc cgtgtttata gcggta
//
LOCUS       DASQSL010002172         2201 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_122293, whole genome shotgun sequence.
ACCESSION   DASQSL010002172 DASQSL010000000
VERSION     DASQSL010002172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2201
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122293"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(207..1340)
                     /gene="ltrA"
                     /locus_tag="VE844_21840"
     CDS             complement(207..1340)
                     /gene="ltrA"
                     /locus_tag="VE844_21840"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: protein motif:HMM:TIGR04416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HZC03884.1"
                     /translation="MEAYGVEWWLGELAEELREKAYRPQALRRVYLEKLNGKVRPLGI
                     PPIRDRVVQTAAMLVLTPIFEADLPPEQYAYRPGRNALTAVRQVHRLLNTGHTQVVDA
                     DVSGYFDSIPHAELMKSVARRVVDRRMLHLIKRWLEAPVEETDKRGRKRRTTHNRDSK
                     RGIAQGSPISPLLANLYMRRFILGWKRLGLEERYQAHIVNYADDLVICCKGPAEEARV
                     SMQKMMERLKLTVNEEKTRLCRVPEEHFDFLGYTFGRCYSTKTGRAYLGTRPSKKSVQ
                     RLTAAISAATTRQTTWLDAETMVGRLNDMLRGWANYFCMGPVSKAYRAIEAHTTQRLR
                     RWLCSKHKVRRAGYTRYPTPYLHQTLGLVDLPTLTQSFPWANA"
     gene            complement(1398..1532)
                     /locus_tag="VE844_21845"
     CDS             complement(1398..1532)
                     /locus_tag="VE844_21845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03885.1"
                     /translation="MTLATPVSVQKLQTALHAKAKGEPEFRFYLLYDKVYRKDVLEHA
                     "
BASE COUNT          385 a          738 c          567 g          511 t
ORIGIN      
        1 gatgcgtgat cgtagaatca ataacttacc gattttttta gctcgagttg tagagtcgag
       61 atgtggcgcg gtggtgtagg gatggcctat ctgttcccgg ccctttcggt tgccggtgcc
      121 tcactagcga ccccgtgctc cgtttccaca tcccgctcat cgaaccggac gtgcagatcg
      181 cctgcatccg gctctcggac aagacatcat gcattcgccc acgggaagct ctgcgtcagt
      241 gtcggcaggt ctaccaaccc cagtgtctgg tgcaggtagg gcgtcgggta gcgtgtatac
      301 cccgctcgtc tgaccttatg cttgctacag agccaccggc gtagccgctg cgtggtgtgc
      361 gcctctatcg cccgataagc cttgctgacc ggacccatac agaaataatt agcccagccc
      421 ctaagcatat cgttgagccg ccccaccatc gtctcggcgt ctaaccacgt cgtttgtcgg
      481 gtcgtggccg cgctaatcgc cgcggtcaac cgctgcacgc tcttcttcga gggacgcgtg
      541 cctaaatagg cgcgtcccgt cttggtcgag tagcaccgcc caaatgtgta gcccagaaaa
      601 tcgaagtgct cctccggcac tcggcagagg cgggtcttct cctcgttcac cgtcaacttc
      661 agccgctcca tcatcttctg catcgacacc ctcgcctcct cggccggtcc tttgcagcag
      721 atgacgagat catcggcgta gttgacgatg tgcgcttggt agcgctcctc taagcccaac
      781 cgcttccacc ccaggatgaa ccggcgcata tacagattgg ccagcaaggg tgaaatcgga
      841 gagccttgcg caatgccccg cttactgtcg cggttatggg ttgtgcgtcg cttgcgcccc
      901 cgcttatcgg tctcttccac cggcgcttct agccacctct tgattagatg cagcatccgc
      961 cggtcgacca cccggcgggc caccgatttc atgagctcgg cgtgcgggat gctatcaaag
     1021 tagccggaca cgtccgcatc aactacttgc gtgtgtcccg tattgagcaa gcggtgcact
     1081 tgcctgaccg cggtcagcgc gttgcgtccg ggtcgatacg cgtactgctc gggtggcagg
     1141 tcagcctcaa atatcggcgt taacaccaac atcgctgctg tttgaaccac ccgatcccgt
     1201 atcgggggta tacctaacgg cctcaccttg ccgttcagct tctcaaggta tacccgccgc
     1261 agtgcttgcg gtcgatacgc cttctctctg agttcctccg ccagttcccc aagccaccac
     1321 tctaccccat atgcctcaat gtcctcaaag ccttcgtcgt ctacccccgc cgcccccttg
     1381 ttggctttgc agcaggccta ggcgtgctct aacacgtcct tgcggtacac cttgtcatag
     1441 aggagataga accgaaactc gggttctccc ttcgctttgg catgtaacgc cgtctgtagc
     1501 ttctgaacac ttactggagt tgccagggtc atccccaatc tccttcctca ccacgtcttg
     1561 cgttggtctt gaactgaggc cccttccctc cgccagcatt acccggcttc atcggtactg
     1621 caggcctctc cctcacccca tcgcgcacgg ccttaccctc gcgggcgtcc gtttggtcct
     1681 cacgcccaga ccacgcgatg gggcttcccg tgttgccgcg gtcttcccct tgtatgcatg
     1741 ccgtcgccca taccccggcg gaactcctgg gtgcctgtct cgctcacttc cccagaaatg
     1801 gcagccttcc ccgaatccgc tgtcgggtcg gcttccgcat cacccttttc gaggcctgct
     1861 cagcgttcac tcacgttacg gcctacctac tcgccaggtc accaaacgtg accctctaca
     1921 ccggaggctt cagtcatttc gttgcctcca cgactgctcc gattgcttcc ggctggagcg
     1981 acagttgccg ggtgggattc gcacccactg aaagaccgtg cctttgcacg gcgcacgcgg
     2041 aagtcgggct aatttttagg aaacccacga tggtccccta ttccaaaata gaaaacgcgg
     2101 cgaaaatcct cgctgaggcc gcccgcccag agaagatcat acttttcgga tcctatgccc
     2161 gtggagaaag cgcgcgagga ttcggatgtg gattttcttg t
//
LOCUS       DASQSL010002173         1592 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_122333, whole genome shotgun sequence.
ACCESSION   DASQSL010002173 DASQSL010000000
VERSION     DASQSL010002173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1592
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122333"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(267..>1592)
                     /locus_tag="VE844_21850"
     CDS             complement(267..>1592)
                     /locus_tag="VE844_21850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03886.1"
                     /translation="VNRLLPDVPEAKIAKAFEELEAIHLLTIADTVIWFAETLNEVTV
                     HERVKQRALTMFNQLHPDTRDKIIKIPRRLLKLIIPCGRRIVRTATLFGLLLTTMLTK
                     RTTRYEGYKGCCKAAWIGKLFGVNAKRVNRERAKLIEEGWFTREPTTPRARKKFGQWV
                     RLNLTPSEPTPEAVENPTPETPKVQPQTPPDDTKVQPLLNPSLSSGEEILNNQTLPAQ
                     EPEPGADQPKPLHAPIWTDMQLHDLRHDARSEALWQEAIQRGHLKNTQPDRINFFAAI
                     AHALRVAKHNACGLLRTVVEQGLWHVLSQADEYNATQRLRRATDAHETNAMPQMHPNP
                     FLTMPSDRSGEINEQPGLSEDALIVQTVTADLQRAGVTRDVFRLVQRHGYLRDWDQDR
                     WLQAEQELAQARLLQARRRYQAMSIQSMQQVMGEGVDEDEAADDGVGTV"
BASE COUNT          289 a          415 c          511 g          377 t
ORIGIN      
        1 ggagccgagt gattcttcga ttgatatttt acttgtcagg ttacacaatg gcgggcagga
       61 cagatgtggt gcccccggac acggggggcg ggttctcggg agtcaacgct tagccatgac
      121 gcgttggggt gagggcaaga ggcaaaatgg atccaaagcc gtgcaacatt ttgcacaagt
      181 tctgcatagg cctgtctgta cgatgatgaa gaccgggtga gaagtctatc cggcattcgg
      241 gttgatctca tacctggcat gagcccttat acggtaccga ccccgtcatc agccgcttcg
      301 tcctcatcga cgccctcccc catcacctgt tgcatgcttt gtatactcat cgcctggtag
      361 cgccgacgtg cctggagcag ccgtgcttga gcgagttcct gttcggcctg gagccatcgg
      421 tcttgatccc agtcccgaag gtagccgtgc cgttggacca ggcgaaagac atcgcgcgtc
      481 accccggccc tttggagatc agcggtaacc gtctggacga tcagcgcatc ttcggataag
      541 ccaggttgct cattgatctc cccgctcctg tcggaaggca tcgtgaggaa gggattcggg
      601 tgcatctgcg gcatggcgtt ggtctcgtgc gcgtcggtgg cgcgtcgcaa tcgctgggtg
      661 gcgttatatt catcagcttg gctcaggacg tgccagagcc cctgttcaac gaccgtgcgc
      721 agcagcccac aggcgttgtg cttggccacg cggagggcgt gcgcgatcgc cgcaaaaaaa
      781 ttaatgcggt caggctgggt atttttgaga tggcctcgtt ggatggcttc ctgccagagt
      841 gcttcacttc gggcatcatg tcgcaggtcg tggagctgca tatccgtcca gatcggcgca
      901 tggagaggtt ttggctgatc agcaccaggt tcgggctctt gggcggggag tgtctggtta
      961 ttcaggatct cttcgccaga agagagagag gggttaagaa gaggttgcac tttggtgtcg
     1021 tcggggggcg tttgaggttg cactttgggc gtctcagggg tggggttttc cacagcctca
     1081 ggggtcggct cagacggggt gagattgagc cgcacccatt gaccaaactt tttgcgtgcc
     1141 cgaggcgtgg tgggttcgcg cgtaaaccag ccctcctcaa tcaacttggc gcgttcccgg
     1201 ttcacccgct tggcattcac gccgaagagc ttaccgatcc atgccgcctt gcaacagcct
     1261 ttgtagccct cgtatcgggt ggtgcgcttc gtcagcatgg tggtgagcaa caggccaaat
     1321 agcgtagcgg ttcggacgat ccgtctgcca catgggatga tcagtttgag gaggcggcgg
     1381 ggaattttga tgattttatc gcgcgtgtcc ggatgaagtt ggttgaacat ggtgagggca
     1441 cgctgtttga cccgctcatg gacggtcacc tcgttgaggg tttctgcaaa ccagatcacg
     1501 gtatcagcaa tcgtcagcag gtggatggct tcgagttcct caaaggcctt ggcaatcttt
     1561 gcctctggga cgtctgggag gagccggttc ac
//
LOCUS       DASQSL010002174         1613 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_176478, whole genome shotgun sequence.
ACCESSION   DASQSL010002174 DASQSL010000000
VERSION     DASQSL010002174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1613
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176478"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..357)
                     /locus_tag="VE844_21855"
                     /pseudo
     CDS             complement(1..357)
                     /locus_tag="VE844_21855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008931251.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
     gene            complement(440..1177)
                     /locus_tag="VE844_21860"
     CDS             complement(440..1177)
                     /locus_tag="VE844_21860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03887.1"
                     /translation="MEVEDFQDLIRLLQARPEWRADLRRVVLTDELLALPEQIARLQV
                     ETDRRFHELAEAQRRTEERVAALAEAQNRINEQIAALTRVVYALTEDVRVLKIDVGDL
                     KGDNLERRYREKAPAYFGRLVRRMRVLSAEELAGLLEDAVEQGQLTDAEKDEAILTDV
                     VVRGRYQGSGAEVYLVVEVSWGVGVHDVERAVQRAAVLGKLGIPALPVVAGKAVTAQA
                     EQLAHEQHVWQVINGQAVSPQSAAPPS"
     gene            complement(1301..>1613)
                     /locus_tag="VE844_21865"
     CDS             complement(1301..>1613)
                     /locus_tag="VE844_21865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03888.1"
                     /translation="YLVAVPVVYPQFMTIEREHDDHVHGVRDPELWREALGWTLVPSG
                     AVMPPIPRYETFPWVAGVGMTDPLKLAVVFDDRYFIASSELSLLNTLLLAEAHQTDKA
                     G"
BASE COUNT          331 a          523 c          435 g          324 t
ORIGIN      
        1 tgccgcggag ccattatcgg caaagaagca gcggttaaga ccgggggggg ttagcgccac
       61 cagacgctca gccagcgcaa tcgctggttc atgggagaac cccgcaagca gcacatgctc
      121 caggaaatca agctaggcat gaaccacggc gttgatacgg ggatgggcat ggccgaaaag
      181 atttacccac caggaactga tggcatcgag ataacgcttg ccgtcgaaat cttcgagcca
      241 cacgccttcg ccccgccgca ccgggatcag cggcaggcgc tcgtggtcct tcatctgggt
      301 gcagggatgc cagagcaccg cgagatcgcg ctctaccatt tcgttattcg tagccataag
      361 ttaatttcgc gcggggactg ccagcttggg aaaccttatc ccgcaatgtt gcagagtttc
      421 gctccgtgga aatcggcatt taagaaggcg gtgccgcaga ttgcggggac acggcctgcc
      481 cattgatgac ctgccaaacg tgctgctcat gagcgagttg ctccgcctgg gccgtcacag
      541 ccttccctgc caccaccggc agggccggga taccgagctt gcccaacacc gcagcccgtt
      601 gcacggcccg ctctacatcg tgaacgccga ccccccacga gacttcgacg accaaataca
      661 cctcagctcc gctcccttga tatcggcctc gcaccaccac gtccgttaaa atcgcttcat
      721 ccttctctgc gtccgtgagt tggccctgct ccaccgcatc ttccagcagc ccggccagtt
      781 cttctgcgga gagaacgcgc attcggcgga ccaaacggcc aaaataggcc ggcgcctttt
      841 cacggtagcg acgctccaga ttgtcgccct tcaggtcccc gacgtcgatc tttaggaccc
      901 tcacatcctc ggtgagggcg tacacaaccc gcgtcagcgc ggcgatctgc tcgttaatgc
      961 gattctgggc ttcggccaag gccgctactc gttcctcggt gcggcgttga gcttcagcca
     1021 gctcatgaaa tcgccggtcg gtttcgacct gtaaacgggc gatctgctcc ggcaaggcta
     1081 acagctcgtc ggtgagcaca acacgccgta gatcggcgcg ccactcaggc ctcgcttgca
     1141 aaaggcgaat cagatcctga aagtcttcaa cttccatagc ttatccctgg gcttactcta
     1201 ctgctttctt gcttcgcttg ctaccgacct ttggagaagc ttgaagagca tataccgcgt
     1261 ctacgtccca tccgctatag agcgcatctg ggaccctcat ctagcccgcc ttgtcagttt
     1321 gatgcgcttc ggccagcagt agggtgttca gcaagctgag ctcgctcgat gctatgaagt
     1381 aacggtcatc gaataccacg gctaacttga gtggatccgt catccccacg cctgccaccc
     1441 acggaaaggt ttcataccgc ggaatcggcg gcatgacagc gccgctcggc accaacgtcc
     1501 atcccagggc ttctcgccac agctccgggt cccgaacgcc gtgaacatgg tcatcatgct
     1561 cccgctcgat ggtcatgaac tgtggataga ccacgggaac ggcgaccagg tat
//
LOCUS       DASQSL010002175         1557 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_204428, whole genome shotgun sequence.
ACCESSION   DASQSL010002175 DASQSL010000000
VERSION     DASQSL010002175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1557
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204428"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            171..>1557
                     /locus_tag="VE844_21870"
     CDS             171..>1557
                     /locus_tag="VE844_21870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HZC03889.1"
                     /translation="MIHSLRELQFILYFLKPYRLRIVLAAVALIIAAATVLSFGQGLQ
                     RLIDRGFSSADPAVLNHLLILLLGLVVLAAIAIGTRFYLVTWLGERISTDIRRTVFDH
                     VLKLSPAFFETTRTGDLLSRLTADAILLETVIGSSASLALRNLLLFIGGSIMLMVTNP
                     KLTLLVMLGVPLVLFPIVYYGRRVRRLSRQSQDRLADVSAYADEALHSIRTVQSFCHE
                     DVDRARFADRLALAFATARRRIQQRALLTGLVIVLVFGSIGIVLWIGGHDVLAGRSTA
                     GELSAFLFYAILVATSVGVISEVWGDVQRAAGAAERLVELLAVQPDIVAPVSPIPLPN
                     PGIGTLRFRRIRFHYPSQPDTAALEDFSMTVEPGERLAIVGPSGAGKTTVFNLLLRFY
                     DPQAGCITLDGIDLRAADPSEVRKRIGLVPQDPVIFGANAWENIRYGRPEAKEAEVRA
                     AAEAAFAIEFLE"
BASE COUNT          272 a          459 c          448 g          378 t
ORIGIN      
        1 atggccctgg gggaaggcgc catggtcccc gagatcccgc tagagatggt gctgcgtgaa
       61 tatcactcgc tgcgagaaaa tcttcgggat taaacccata agccttgtta aaccgtgggt
      121 ttcaatagtc tgattggtag cctttggatg ctgagcctcg cctgccgctt atgatacata
      181 gtctacgcga gttgcagttt atcctgtatt ttctcaaacc ctatcgcctt cgcatcgttc
      241 tcgcggccgt cgcgctgata atcgcagcgg ccaccgtcct gagcttcggt caaggcttgc
      301 aacggctcat cgaccgcggc ttcagtagcg ccgatcccgc cgtcctcaat catctgttga
      361 tcctgcttct ggggctggta gttcttgccg ccatcgccat tggcacgcgc ttttatctgg
      421 tgacctggct gggtgagcgg atcagcaccg atattcggcg tacggtcttc gaccatgtac
      481 tgaaattaag cccggcgttc tttgagacga cacgcaccgg agatttacta tcacggctga
      541 cggccgatgc tatcctatta gagaccgtga tcggctcgtc ggcctcactg gccttgcgca
      601 atctcctgct gttcatcggc ggcagcatca tgctcatggt caccaatcct aagttgacgc
      661 tattggtgat gctcggtgtt cccctggtcc tgttccccat tgtgtactat gggcgccgag
      721 tcaggcgact atcgcggcaa tcgcaggatc gcttggccga tgtcagtgcc tatgccgatg
      781 aggcgctgca tagcatccgc accgtgcagt ccttctgtca tgaagatgtg gatcgcgccc
      841 gttttgccga tcggctcgcg cttgcctttg ccacagcacg ccgccggatc cagcagcgtg
      901 ccctgctcac tggcctggtg atcgtgctgg tctttggatc gatagggatc gttttatgga
      961 tcggtggcca cgacgtgctt gcaggccgga gcacggctgg agaattatcc gcctttctgt
     1021 tttatgcgat cctggtggct acctcggtcg gtgtcatcag tgaggtatgg ggcgatgtac
     1081 agcgtgcggc tggggcagca gagcggctgg ttgagttgct cgcggtccaa ccggatattg
     1141 tcgcccccgt gtctcctatc cccttgccca accccggcat aggcactcta cgattccggc
     1201 gtatccgttt tcattaccct tcacagccag atacagcggc tcttgaggat ttctccatga
     1261 ctgtggaacc gggagaaagg ctggccatcg tcggtccttc aggggcgggc aagaccaccg
     1321 tattcaacct gctgctgcga ttctatgacc cccaagccgg ctgcatcacc ctcgatggca
     1381 ttgatctgcg tgccgccgac ccaagtgagg tgcgcaagcg catcggtctg gtccctcaag
     1441 accccgtgat cttcggcgcc aacgcctggg aaaacatccg ctacggaagg ccggaagcaa
     1501 aggaggcgga ggtgcgagcg gctgccgagg ctgccttcgc gatcgagttt ttagagc
//
LOCUS       DASQSL010002176         1061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_122501, whole genome shotgun sequence.
ACCESSION   DASQSL010002176 DASQSL010000000
VERSION     DASQSL010002176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1061
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122501"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(89..892)
                     /locus_tag="VE844_21875"
     CDS             complement(89..892)
                     /locus_tag="VE844_21875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007907679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HZC03890.1"
                     /translation="MSADDRYPTDLTDEQWELLQSLLPERTWCPGGPGRPPCDVRRIV
                     NGILYVNKTGCQWRLVPKEFGHWNTIYGYFKRWRRDGVWARVMETLRQWERRCLGRKP
                     EPSAGSIDSQSIKTATQNEDIGFDGNKKIKGRKRHILVDTLGLIIAVVVTDAGTDDRL
                     GVVELLAQYFADGVKRLRKIWVDGAYPAAWLEEWVRGLKQTHKIDLEATTAKAGKGFQ
                     VIPWRWAVERTFAWLLNDRRHSRDYERLTANSAAMIQISMIRLLLNRLA"
BASE COUNT          230 a          329 c          270 g          232 t
ORIGIN      
        1 cccacagagg gggaagctgt gatggtcaga agcggcatgg gaagccacac gtgaagcaac
       61 tccagataag aagctgttgt aaaattcctc atgccaaccg attcagcagc agtcgaatca
      121 tgctaatctg gatcatggcg gcgctgttag cggtcaatct ctcatagtcc cggctatggc
      181 gacgatcatt gagcaaccac gcaaatgtcc gctccaccgc ccagcgccaa ggtatcactt
      241 ggaagccctt ccccgctttg gcggtcgtcg cctccagatc gattttgtgc gtctgcttca
      301 agcctcgcac ccactcttca agccacgcgg caggataggc gccatcgacc catattttgc
      361 gcagccgctt gaccccatca gcaaaatact gggctaataa ctccaccact cccaggcgat
      421 catccgtgcc ggcatcggtt acgaccacgg caatgatcaa ccccagcgtg tcaaccaaga
      481 tatgccgctt gcgccctttg atcttcttgt tgccatcaaa cccgatgtct tcgttttggg
      541 tcgctgtctt gatactctgc gagtcaatgc tgccagcgga gggctcaggc tttcgtccca
      601 gacaacgtcg ctcccactga cgaagtgtct ccatcacgcg tgcccagacg ccgtcgcgcc
      661 gccagcgctt aaaatagcca tagatggtgt tccagtgacc aaattccttc gggaccagac
      721 gccattgaca gcctgtcttg ttgacgtaca ggataccgtt gacgatacgt cgcacgtcgc
      781 atggcggtcg tccgggtccg ccggggcacc aggtgcgctc aggcagtaag gattggagca
      841 actcccactg ctcatcggtc aaatcggttg gatagcgatc gtcggcgctc atggttaatc
      901 cccccacatc tggttatgag atttgtggga gtgtgagacc atgagtgctg cttggcaagc
      961 ccctcagcta acctccaaca cggttttaca acagcttcta aggacatgcg cctccgcacg
     1021 ggccaccata tggccaagca atcctggctt cgcctcggat a
//
LOCUS       DASQSL010002177         1125 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_204459, whole genome shotgun sequence.
ACCESSION   DASQSL010002177 DASQSL010000000
VERSION     DASQSL010002177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1125
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204459"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..417)
                     /locus_tag="VE844_21880"
     CDS             complement(<1..417)
                     /locus_tag="VE844_21880"
                     /inference="COORDINATES: protein motif:HMM:NF014215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HZC03891.1"
                     /translation="MVSERITFEADDVTCEGILARPETVAQAPGLVICHPHPLYGGDM
                     HNAVVRGLAEAFAAADFAVLRFNFRGVGQSTGRYGEGIGEQQDARAAVEWLTAQAGVD
                     PARLFLAGYSFGARVTLAVAATDPRLCGFIAVAPPVL"
     gene            complement(526..>1125)
                     /locus_tag="VE844_21885"
     CDS             complement(526..>1125)
                     /locus_tag="VE844_21885"
                     /inference="COORDINATES: protein motif:HMM:NF015119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010498 - proteasomal protein catabolic
                     process [Evidence IEA];
                     GO_process: GO:0019941 - modification-dependent protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proteasome accessory factor PafA2 family
                     protein"
                     /protein_id="HZC03892.1"
                     /translation="KLQLDDGRKASALEVQQAYLEQALTYYARKGADPDVTDILQKWE
                     HVLTCLDNDPMELRREIDWVIKKHLVERYLSKHDPESSEDKVLMLDLQYHDIRTNKGV
                     YYLMEKNGQVERMATDPAIQLATSHPPQNTRAKLRGELIKLARQKRIPYDLDWNYIRL
                     GYLLNLWVRCNDPFQEENEKVTLLKRRLEKTNFKYGYLL"
BASE COUNT          219 a          328 c          324 g          254 t
ORIGIN      
        1 taagacgggt ggggcgacgg cgataaagcc gcacaggcgg ggatcggtcg ccgccaccgc
       61 caaggttacc cgcgccccaa aggagtaacc cgccaggaaa agcctcgccg gatccacccc
      121 tgcctgggcg gtcagccatt ccacagcggc tcttgcatct tgctgctcgc caatgccttc
      181 gccgtatcgc cccgtactct gccccactcc gcggaagtta aagcgcaaga cggcaaaatc
      241 cgcggcggcg aaggcctcag ccagtcctct cacgacagca ttgtgcatgt ctccgccgta
      301 gaggggatgg ggatggcaga tgacaagccc cggcgcttgc gccaccgtct cagggcgggc
      361 caagatcccc tcgcaggtga cgtcgtcagc ttcaaatgtt atacgctcgc ttaccatgag
      421 agatgtatgc tctctgctgc tctatgatcg agatggcaac gcggttaagt ggttatcgac
      481 atcaacggcc tacaagaccg acatctggct ggctgtagag ggagtttaca gcagataccc
      541 atatttgaag ttggttttct ccagccggcg cttcagcagc gtcaccttct cgttctcctc
      601 ctggaaagga tcattgcagc ggacccagag gtttaggaga taccccaggc ggatgtagtt
      661 ccaatccagg tcgtatggga tgcgcttctg gcgcgcgagc ttgatcagct ccccacgcag
      721 tttcgctcgg gtgttctgtg gcggatggct ggtcgcaagt tggatggcgg gatccgtagc
      781 catacgctcg acctgcccgt tcttctccat cagataatac acgcccttat tggtgcgaat
      841 atcgtgatac tgcaggtcga gcatgaggac cttatcttca ctggattccg ggtcatgctt
      901 actgagatag cgctcgacaa ggtgcttctt gatgacccag tcgatttccc gtcgaagctc
      961 cataggatca ttgtcgaggc aggtcaggac atgttcccac ttttgcagaa tatccgtgac
     1021 gtcagggtct gcccctttgc gggcgtagta ggtgagcgct tgttcgaggt atgcctgttg
     1081 cacctccaag gcgctggctt tgcgcccgtc atcgagctgg agttt
//
LOCUS       DASQSL010002178         1097 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_204544, whole genome shotgun sequence.
ACCESSION   DASQSL010002178 DASQSL010000000
VERSION     DASQSL010002178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204544"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            901..>1097
                     /locus_tag="VE844_21890"
     CDS             901..>1097
                     /locus_tag="VE844_21890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03893.1"
                     /translation="MPTERNIEESYLFAGGANRENEIREYVVDATLEDGRKAQRRFRY
                     TPSKEYGDTTDFDRDVYRAII"
BASE COUNT          281 a          302 c          308 g          206 t
ORIGIN      
        1 ttcctcatcg gccctcatcg cccgataaac ggtagtaata actcctcccc tgtgcccgct
       61 cagcctctga tgatcctacg ctactaggga cggcgctgtg cgcccacttg gagttgcttg
      121 tgagtaggga acttccgaga actccgtaaa ggcgaagttc gcagaaatcg tgataggtga
      181 agttagcaga attccaattc catgagtttc gtgaatagaa gcgtgagatc gcggaatacc
      241 gacccttcac gcaagaacgc caattaatac cgacctctca cgcaagcttt gagcgatcgc
      301 ggctgccgga gagacgcccg cgaacgggga ggcaaacggg ttgatgcaca atttacgggc
      361 gatcctaaac aaccccatag cgataagtcc gaataccgac tcctcacgca gggtcgcgag
      421 cgggtgagag cctcaccaca agaataacga cctctcgcgc aagattctca tcgtgcagaa
      481 aacgtcggct gcggaagcgt agaacggtgg ccgcgagacc tgagcgtggg tgcggcagca
      541 aaagaatacc gaccgctcac gcaagaatcg gcggtgacgg ccttgaaaat acagaccttc
      601 agcgcaagga atgccgacct ttcgcgcaaa ggataccgac ctttcgcgca agggattacc
      661 gactctccgc gcaagaacgg cgccgaatac agacctctca cacaagtaat accgacctct
      721 cgcgcaagac tgcgccgaga aacacctgca aatcgatgca tttttccgat aggctcccct
      781 ttccatgttg tagttgtttg tgtttaagtg ttctgttgta gcaagcaatc gggaggatga
      841 gggatgggaa ggcaaggctc cgaaccagtt cgccttcggt tggcaccaca gcccgagtta
      901 gtgcctaccg agaggaacat cgaggaatcg tacctctttg cgggcggagc caacagagag
      961 aacgagatcc gcgagtacgt agtcgatgct accttggagg atggcaggaa ggcacagagg
     1021 aggttccgct acacgccgtc gaaggagtac ggcgacacga cggacttcga ccgggacgtc
     1081 taccgggcga tcatatt
//
LOCUS       DASQSL010002179         1618 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_176724, whole genome shotgun sequence.
ACCESSION   DASQSL010002179 DASQSL010000000
VERSION     DASQSL010002179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176724"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..237)
                     /locus_tag="VE844_21895"
     CDS             complement(<1..237)
                     /locus_tag="VE844_21895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007918069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
                     /protein_id="HZC03894.1"
                     /translation="MRCPYCQSTAITERPDRTALGYRRWRCRDCQRGCNERTGTPFNR
                     LQYPTDVVCLVVLWRFRYKLSLRDLAEMFLQRGLV"
     gene            complement(415..666)
                     /locus_tag="VE844_21900"
     CDS             complement(415..666)
                     /locus_tag="VE844_21900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011630659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03895.1"
                     /translation="MAAKKTGLASFTGSRETSNEGQGEGIAAFRTRAKGDTVQMTVRL
                     TREQWERINQLADTEGVSFNQLAIHAISKLFEGRGLPKL"
     gene            complement(656..1288)
                     /gene="parA"
                     /locus_tag="VE844_21905"
     CDS             complement(656..1288)
                     /gene="parA"
                     /locus_tag="VE844_21905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012806100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family partition ATPase"
                     /protein_id="HZC03896.1"
                     /translation="MRTIAFLSQKGGSGKTTLAVHTAVAAEEPGEKVFLIDTDPQGSS
                     QAWSQARNQESPPVHKAIASNIRRVFEQAAQQKATLVVIDTAPHATPGVDAIAAAADF
                     LLIPCRPSAFDLAAIASSVQVAKASGKPAAFIMNACPARAPEVEETREVLESYNLPLA
                     PVAIGDRRAFARAVATGRAVTEFDAEGKAAEEITKLWKWIRKQIGGKHGS"
     gene            complement(1418..>1618)
                     /locus_tag="VE844_21910"
     CDS             complement(1418..>1618)
                     /locus_tag="VE844_21910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03897.1"
                     /translation="ECQERPIAEKEMSEALAFLSDRGPRSEAFARQFRAALQIPYPEQ
                     HYHTAAAALHKLREQFGTSLLS"
BASE COUNT          325 a          452 c          468 g          373 t
ORIGIN      
        1 gactagacct cgctgaagaa acatttctgc caagtctcgc aggcttaact tgtagcggaa
       61 gcgccagagg accacgagac agaccacatc cgtcgggtat tgcagccgat tgaagggcgt
      121 ccccgtccgt tcgttgcacc cccgttgaca gtcgcgacag cgccaacggc ggtagcctaa
      181 cgcggtgcgg tcaggacgtt cggtgatggc cgtcgattgg caatagggac acctcatctc
      241 acaccctcct ttcggagggg taagtgtaca ctgcgagccg gaagaaacca aggtggcgcg
      301 aatgctgaca gaaccgggcg tttcggtcgc atcgtcctat ggcaaccacc tccttatcga
      361 cgcacatttc attttcatga catcatgacg ccatgatttc atggcgtcat gatgtcagag
      421 cttaggcaac cccctgccct caaaaagctt ggaaatcgca tgaatcgcca actgattaaa
      481 actgacgcct tcggtatcgg cgagctggtt gatccgttcc cattgttcgc gggtcaggcg
      541 gacggtcatt tgcaccgtgt ctcccttcgc cctggtgcga aacgctgcga tcccctcccc
      601 ctgcccttcg tttgacgtct cccggctgcc ggtaaatgaa gcaaggccgg ttttcttagc
      661 tgccatgttt tcctccgatt tgcttgcgaa tccatttcca gagtttggtg atttcctcag
      721 cggctttccc ctcggcgtca aattccgtga cggcgcggcc ggtggcaacc gctcgggcaa
      781 acgcacggcg gtcgccgata gccacgggcg cgaggggaag attatacgat tcgaggactt
      841 ctcgggtttc ctcaacctcg ggcgcgcgcg cagggcaagc gttcatgata aaagcggctg
      901 gctttccaga tgccttggcc acctgcacgc tggaagcaat cgcggccagg tcgaacgctg
      961 atgggcggca aggtatcaac aagaagtccg cagcggcagc aatcgcgtca acgcctgggg
     1021 ttgcatgggg agcggtatca atgacaacga gagtcgcctt ctgctgcgcg gcctgctcaa
     1081 agacgcgcct gatatttgag gcaatcgctt tatggacggg aggactctct tgatttctgg
     1141 cttgagacca tgcttgcgag cttccctgag gatcggtgtc tatcaaaaaa actttttcgc
     1201 ctggttcctc ggccgcaaca gcggtatgca ctgccagggt cgttttcccg ctgccgcctt
     1261 tttgcgaaag aaaggcaatc gtgcgcataa ggggtccccg gtttttgatt tcgtggcgtc
     1321 atgacctcgt taggtcatgg cctcatgact gagcgcaaag taaatgttgg gatgggtctg
     1381 cgtcaatgta attttgaaaa agtggactgg tagcggatta cgaaagaagg gatgtgccaa
     1441 actgctcacg cagtttgtgt agggctgcag ctgccgtatg gtagtgctgc tctggatacg
     1501 gtatctgtaa ggctgcccgg aactgccggg cgaaggcttc ggagcgcggg cctcgatcac
     1561 tcaggaaggc aagcgcctcg ctcatttctt tctccgctat cggtcgctcc tggcattc
//
LOCUS       DASQSL010002180         1455 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_204641, whole genome shotgun sequence.
ACCESSION   DASQSL010002180 DASQSL010000000
VERSION     DASQSL010002180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1455
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204641"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1413)
                     /locus_tag="VE844_21915"
     CDS             complement(<1..1413)
                     /locus_tag="VE844_21915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03898.1"
                     /translation="MGFNRIGSNNTGGGVAHALLTVFLCATAQPGLAAEPKTVVKEPV
                     QEIALTDQADLESERRIHAVIKREIPTEKEVAGRFVGKRITEIDQWETAFLALRKNLS
                     IRRGHIAEQIAKQALLEAQAVFDPVLTLSVAYDHSETFTLEERDLRFRRGTQVDAQGR
                     HILAGDPDDPRGTQVEFNQARPEGFSPSDIVASQAPITGPTKRLTYDVSLFQQLPWGA
                     ALFLTYEAIDQERFFTNFPAFFRNNPNPQPGFVAFGSYDRPWISSLLATLVLPVPGSR
                     NFGPYADQEVAIKLQDLGKDRAYWVVEDIINTTLRDVDIAYWDLVNSLLSLQITLNNR
                     QQVGTLLEKTLGLYNLEEATTYDKAQAEAELARIQGVEEDAWNNYVLASDALVRLLDK
                     EADELLLPVGFTRALKLPFPPAPLRLEELAAAGTADNPARIASTIDVQAARIEQRRRA
                     VRTRPDITFTADVTVQQSNSR"
BASE COUNT          286 a          414 c          425 g          330 t
ORIGIN      
        1 tcggctattg ctttgctgga cggtgacatc cgccgtgaaa gtgatatcgg gccgggtacg
       61 cactgcccgg cggcgttgtt cgatgcgggc ggcctgcaca tcgatggtac tcgcgatccg
      121 cgctggatta tccgccgtcc ccgccgcggc gagttcttcc agacgcagag gagcgggcgg
      181 gaacggcaac ttgagcgctc tggtgaaacc caccggcaag agcagctcat cggcctcctt
      241 gtccagcagc ctcactaaag catccgaggc cagcacataa ttattccagg cgtcttcttc
      301 tactccctgg atccgggcca gttccgcttc cgcttgggct ttgtcatagg tcgtggcctc
      361 ttccagatta tacagcccta gggtcttttc caagagggtt cctacctgtt ggcggttatt
      421 gagtgtgatc tgtaggctca agaggctatt gaccaagtcc caataggcga tatccacatc
      481 gcgtaaggtg gtgttgatga tatcctcgac cacccagtag gcccggtcct tgcctagatc
      541 ctgaagcttg atcgcgacct cttggtcggc atagggcccg aagtttctgc tgccgggaac
      601 cggtagtacg agtgtggcga gcagcgagga gatccagggg cgatcatagg acccgaaggc
      661 gacaaaaccg ggctgtggat tagggttatt cctgaagaaa gccgggaagt tagtgaagaa
      721 cctctcttgg tcgatcgcct cataggtcag gaacagtgcc gctccccagg ggagttgctg
      781 gaacaggctt acatcatagg taaggcgctt ggtcggtccg gtaatcggtg cttggcttgc
      841 gacgatatcg ctcggagaaa agccttcggg acgggcttgg ttaaattcta cctgggtgcc
      901 gcgtggatcg tcaggatcac ccgccaagat atggcggccc tgcgcatcga cctgagtccc
      961 ccgccggaag cggagatcgc gctcttccag ggtaaaggtt tcggaatggt cataggccac
     1021 cgaaagcgtc agcacggggt caaacaccgc ctgagcctcg agcaaggcct gcttggcgat
     1081 ctgctcggcg atatggcccc ggcggatgga gagattcttg cgcaaggcaa gaaacgccgt
     1141 ctcccactga tcgatctcgg taatccgctt gcccacaaaa cgccctgcga cttccttttc
     1201 tgtagggatt tcgcgcttga tcaccgcatg gatccggcgt tcactttcta aatccgcctg
     1261 atcggtaagc gctatctcct gaaccggttc tttaaccact gtcttgggtt cggcggcgag
     1321 tcctggctgc gctgtcgcac acaggaagac agtgagtaac gcatgggcaa cccccccacc
     1381 ggtgttatta gatcctattc gattaaaccc catagacgct ctcctgcctg tcgttttctg
     1441 agcggcatct agttt
//
LOCUS       DASQSL010002181         1140 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_176773, whole genome shotgun sequence.
ACCESSION   DASQSL010002181 DASQSL010000000
VERSION     DASQSL010002181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1140
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176773"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..376)
                     /locus_tag="VE844_21920"
     CDS             complement(<1..376)
                     /locus_tag="VE844_21920"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004061 - arylformamidase activity
                     [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HZC03899.1"
                     /translation="MEPLVRIPYIIDITRRITADMPVWPDDPPPALEAIATLERDGVQ
                     VSRLILGTHTGTHLDAPRHFITGGQTVDQLDLAALLGPCCVLDVESRGLHITREDLEN
                     FDLQAGARVLLKTRNSRQPPTQT"
     gene            complement(442..762)
                     /locus_tag="VE844_21925"
     CDS             complement(442..762)
                     /locus_tag="VE844_21925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03900.1"
                     /translation="MAHYFVLILVALTSLGMYWFGAKISGFSAAGFRPACGKVLESVG
                     LTLLFFALNLTVGMLVVLAVRSLTGGFVSLYHASDVTLLVLALLQGFTFQWWRELSRH
                     RRQT"
     gene            complement(776..>1140)
                     /locus_tag="VE844_21930"
     CDS             complement(776..>1140)
                     /locus_tag="VE844_21930"
                     /inference="COORDINATES: protein motif:HMM:NF014724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HZC03901.1"
                     /translation="SGPANGVGVVEAHVRAELARIMGIPATAIITETTALTTREEARR
                     LSALLQPRGIQRILLVTDATHMPRSLRLFEQAGFVVHSAPVDELTLAGSPESRLKLMR
                     LLAQELLARLYYRVAGYL"
BASE COUNT          265 a          338 c          327 g          210 t
ORIGIN      
        1 acgtctgggt gggtggttgg cgggaattcc gcgtcttcag gaggacgcgc gctcccgctt
       61 gcaggtcgaa gttttctaag tcctcacggg tgatgtgcaa gcccctcgat tccacgtcga
      121 ggacacagca gggaccgagc agcgccgcga ggtcaagttg gtcaaccgtc tgtccccctg
      181 tgatgaagtg tctgggggca tcaagatgcg taccagtatg tgttcccagg ataagccggc
      241 tgacctgcac accatcgcgc tccaatgttg cgatagcctc caaggctgga gggggatcat
      301 ctggccatac aggcatgtcg gctgtgatgc ggcgcgtaat atcgatgata tagggtatcc
      361 tgaccagagg ttccatgccg tttcgctccc atgatacgag accagttgcc ggcccttgtg
      421 tggcacaggc gctgctgagt cctaagtctg tcgacgatgg cgcgagagtt cccgccacca
      481 ctgaaaggta aatccctgca gcaacgccaa cacgagcagc gttacatcgg aggcatggta
      541 gagagacaca aaacctcctg tcaaagaacg caccgccagg acaacaagca ttcccacagt
      601 cagattgagt gcaaagaaca ggagcgtgag gccgacagac tctaggactt tgccgcaagc
      661 cgggcgaaac cctgctgccg agaacccaga gattttggca ccgaaccaat acatacccag
      721 cgatgtcaac gccacgagga tcagaacgaa atagtgcgcc actcgacctc ccgtgctata
      781 aatagccagc aacacgataa tacaggcgtg ccaacagctc ctgcgccagc aatcgcataa
      841 gcttcagccg cgactcggga ctcccagcca gagtgagttc atcgaccgga gctgagtgta
      901 cgacaaagcc tgcttgttcg aagagtcgca gcgaccgcgg catatgggtt gcgtctgtga
      961 ccaggagaat cctctggatg ccccgcggct gcaacagcgc cgataaccgc ctggcctcct
     1021 cgcgcgtggt cagcgctgtg gtttcggtga tgatcgctgt cgccggaata cccataatgc
     1081 gcgccagttc agcacgcaca tgggcctcta caacaccgac accgttggcc ggccctgaaa
//
LOCUS       DASQSL010002182         1040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_122753, whole genome shotgun sequence.
ACCESSION   DASQSL010002182 DASQSL010000000
VERSION     DASQSL010002182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122753"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1040)
                     /locus_tag="VE844_21935"
     rRNA            complement(<1..>1040)
                     /locus_tag="VE844_21935"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          187 a          340 c          261 g          252 t
ORIGIN      
        1 ggcaggcgtc agcccctata cgtcgtcttt cgacttagca gagacctgtg tttttggtaa
       61 acagtcgctt ggacctattc actgcggccc cctcgggctc ggtccgcgaa ggacttcacc
      121 ctaccggggc gccccttctc ccgaagttac ggggcaattt tgccgagttc cttaacgagg
      181 gttatctcga tcaccttagt attctctact tgtccacctg tgtcggtttt ggtacgggca
      241 cgcgtccact gcctagaggc ttttctcgga ggcatggggt cagcagctcg ccggccttcc
      301 ggccggctgg catcgcacct cgcatcaaca ctcgcccgga ttttcctgag cgagctagct
      361 acatgcttac ccctggtcaa ccatcgccag ggatccctta gccttcctcg tccccccatc
      421 ggtcataacg ggaacgacgt ggtacgggaa tatcaacccg ttggccatcg actacgcctt
      481 tcggcctcgc cttaggtccc gactaaccct gagccgacga acgttgctca ggaaaccttg
      541 gacaatcggc ggaggggatt ctcacccctc tttcgttact catgccggca ttctcacttc
      601 cggtacctcc acggcgagct ctcgctgccg cttcacagga tccggaacgc tctcctaccg
      661 cgcgcaaatc ccgcaggacc tacgcacccg cagcttcggt gtctagcttg agccccgttg
      721 aattttccgc gcacggacac ttgaccagtg agctgttacg cactctttca agggtggctg
      781 cctctaagcc aacctcctgg ttgtctcggc atccgaacat cgttcaccac ttagctagca
      841 cttggggacc ttagctggcg gtctgggctg ttcccctttt gcctacgaag tttatccccc
      901 gcagactgac tcccggagta gacgtgatgg tcttcggagt ttggctgaag tcggtaacct
      961 ggtagggccc ctagtccatc cagtgctcta cggccatcac gcaataactc gacgctatac
     1021 ctaaatatat ttcggagaga
//
LOCUS       DASQSL010002183         1205 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_204707, whole genome shotgun sequence.
ACCESSION   DASQSL010002183 DASQSL010000000
VERSION     DASQSL010002183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204707"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..996)
                     /locus_tag="VE844_21940"
     CDS             complement(<1..996)
                     /locus_tag="VE844_21940"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03902.1"
                     /translation="MAPMKRYAKKQAKANKRRRLNAQQRLRQQRAQAQRYIEAIHQAL
                     ADLGFPDTLVAEIEGRLQTQQKLLGKIVGIMFPTLFGCRAGHELTRVRGWNKNIPTQL
                     LGALPKRSWLKRLRRLGLEILISIWRHTHNQSASTQSRWQWRWVVDDSVFRKYGKHFR
                     LVGRWWSGQFKHPVAGIDGVVLLVVLGDGKLIVPVDFAIRRPNPKGPGARCQDKLQLT
                     QKMLDGRLAAFAKRGVTLAPPMVVADSWFSDSKLMRWVADAHQGTLLVQGKRTYAFTL
                     EDGQKVKGSDLVKVDNWLWKHSLHAPGCRYGRLRARSRTYGDVVLVVVDKPGDKPF"
BASE COUNT          257 a          340 c          343 g          265 t
ORIGIN      
        1 aaacggtttg tcaccgggct tgtccaccac cacgagaacc acatcgccat aggtgcgact
       61 gcgcgctcgc agccgcccat agcgacatcc tggagcatgc agactgtgtt tccagagcca
      121 attgtcgact ttgaccaagt ctgagccctt gaccttttgg ccatcttcga gggtgaaggc
      181 ataggtgcgt ttgccttgca ctaacagggt accttgatgg gcgtcggcca cccagcgcat
      241 gagcttggag tcgctaaacc aactatcggc caccaccatg ggcggcgcta acgtgacgcc
      301 gcgcttggca aaggcagcca agcgcccgtc gagcatcttc tgggtaagct ggagcttgtc
      361 ttggcaacgc gctcccggac ctttgggatt ggggcgccga atcgcaaagt caaccgggac
      421 gatgagctta ccatcgccaa ggaccacgag caacaccacc ccatcgatgc cggctacggg
      481 atgtttgaac tggccactcc accaccggcc gacgagcctg aagtgtttgc cgtattttcg
      541 aaacaccgaa tcatcgacaa cccatcgcca ctgccagcga ctttgcgtcg aggcactttg
      601 gttgtgggta tggcgccaga tcgagatgag tatctccagg cccaggcgcc gcagccgttt
      661 gagccaggag cgtttgggca gcgcacccaa cagctgcgtg gggatgttct tgttccatcc
      721 gcgtacgcgg gtgagctcat ggcccgctcg acagccaaac agggtgggaa acatgatccc
      781 gacgattttg cccaagagct tttgttgcgt ctgcaagcgg ccttcgattt cagccaccag
      841 ggtatcggga aaacctaaat ccgccaaggc ttgatggatg gcctcgatat agcgttgggc
      901 ctgggcgcgc tgttgtcgga ggcgctgttg ggcgttgagg cgacggcgtt tgttggcttt
      961 ggcttgtttt ttggcatatc gtttcatcgg ggccatggca atctccttcg agtgaagctg
     1021 tttgtcgata caaacattcg aaggagagca tgccccattt gaggcacgtg cgacaactca
     1081 tgacttgcga ttgcgaaaga ccgttcgcaa cctcttgaat ataaatagat ttcatgagca
     1141 cctaggcgca aagccgcatg aatcctgact gatctcacga aacggaaaga tcagatgctt
     1201 tcttc
//
LOCUS       DASQSL010002184         1452 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_204727, whole genome shotgun sequence.
ACCESSION   DASQSL010002184 DASQSL010000000
VERSION     DASQSL010002184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1452
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204727"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            201..1319
                     /locus_tag="VE844_21945"
     CDS             201..1319
                     /locus_tag="VE844_21945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007905179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03903.1"
                     /translation="MDPREQFCHNPACPDRGQSGQGNIRIPSRKEQRYRCSSCERTFA
                     ATTGTLFYGLRTATDVVTLVLTLLCHGCPLQAIVAAFGFDERTVAQWQARAGEHCRQV
                     HRHWVEQGQVELGHVQADELWVKMVGKRVWMAMALAVPSRLWLGGVISSHRNRALITE
                     LVQGVRACARSLAILVCVDGLASYVTAFLRVFRHKIATGRRGRPRLVVEAGLLIGQVI
                     KRYARRRVVGVAHRVARGTSQAITAVLTKTGGGTGINTAYIERLNATFRSALAPLVRR
                     GRALAHKEAVLTAGMYLVGCAYNFCWYHDSLRLAAPENAPRKWQEQTPAMAAGLTDHR
                     WTLRELLLLKVPLPAWVAPKRRGRPSKLKPQPVMAMAA"
BASE COUNT          311 a          386 c          444 g          311 t
ORIGIN      
        1 aaactttttg gaaaggggtg ctcattatag attgacccaa ataaacacat tattaaccta
       61 ttaaaaccaa ataaacccaa ataatacgta tggtagcacc ccagttgacc gtggtgagtg
      121 atgaaagacg ttgaaaaagc gtgggtccaa ggtagatcct taagaggtga ttaccaaatt
      181 gcatctcaag gagattgccg atggacccac gagaacaatt ttgtcataac ccagcttgtc
      241 ctgatagagg gcagagtgga cagggcaaca tccgcattcc tagtcgcaag gagcagcgct
      301 atcgctgtag cagctgtgag cggacctttg cggccacgac gggcacactc ttctatgggc
      361 tgcggacggc cacagatgtg gtgaccctgg tgttgacctt gctttgccac ggatgtcctc
      421 tccaggccat tgtggcggct ttcggtttcg atgagcgtac ggttgctcag tggcaggcac
      481 gtgcagggga gcactgccga caagtccacc ggcattgggt cgaacagggc caggtggagt
      541 tgggccatgt gcaggctgat gagctctggg tgaagatggt gggtaaacgc gtctggatgg
      601 cgatggcctt ggccgtgccg tcgcgcctgt ggttgggtgg ggtgatcagc tctcaccgca
      661 accgtgcctt gatcaccgag ttggtgcaag gggtccgtgc ttgtgcgcgg agcctggcca
      721 tccttgtctg cgtggacggc ttggcgagct atgtaacagc ctttctgcgc gtcttccggc
      781 acaagatagc tacggggcgt cgtggacggc ctcggctagt ggtggaggcg ggcctactca
      841 taggccaggt catcaagcgc tatgcccggc gacgggtcgt cggggtggcg catcgtgtag
      901 cgcgcggcac ttcccaggcc atcaccgccg tgctgaccaa aacgggcggt ggcaccggta
      961 tcaataccgc ctacattgag cgactcaatg ccacctttcg cagcgcactg gctcctttgg
     1021 tgcgccgagg acgcgccctt gcccacaaag aagcggtgct gaccgctggg atgtatctgg
     1081 tggggtgtgc ctacaacttc tgctggtatc atgacagtct tcggctggca gcgcccgaga
     1141 atgcgccccg gaagtggcaa gaacagaccc ctgccatggc cgcaggacta acagaccacc
     1201 gttggaccct gcgtgagttg ttgctactca aggtccccct gcccgcttgg gtcgcaccca
     1261 agcgccgagg acgtccatcc aagctgaaac cgcaaccggt aatggcaatg gcagcgtgat
     1321 cacggtttag tgtggtgcta ccgatctgac aaagccgctg gaaaaatgtg aatatttcat
     1381 aatctaactc tcttcacttg gcgtatgctt agaataataa gcccttaaag ccgcagggct
     1441 agagagggct cg
//
LOCUS       DASQSL010002185         3548 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_122837, whole genome shotgun sequence.
ACCESSION   DASQSL010002185 DASQSL010000000
VERSION     DASQSL010002185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3548
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122837"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            185..544
                     /locus_tag="VE844_21950"
     CDS             185..544
                     /locus_tag="VE844_21950"
                     /inference="COORDINATES: protein motif:HMM:NF012272.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="globin domain-containing protein"
                     /protein_id="HZC03904.1"
                     /translation="MRPKSSITATLRLRHTANTLLEHQLDSTPHSPGEDARVHTEFAR
                     ERSESHARDSGGIARELGKRHRDYKIARADYDKVLRALLRTLEEFLAEDLTSEIRHAW
                     ITVYGMIAETMIEAAED"
     gene            complement(556..1191)
                     /locus_tag="VE844_21955"
     CDS             complement(556..1191)
                     /locus_tag="VE844_21955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HZC03905.1"
                     /translation="MHFDEIRNAHLEQVAAELYSDQMPYHNFNHVLETLAAGAILVER
                     CLKEGVPINGVIVYYALLFHDAGYHESHISKGFTSKEEYSAHLAVQCLRAEAISEDTI
                     KRVASAILSTQRDTQFTSNEEKAVRAADLAGLASDYETFRSNVKKLHQECETLTGRKV
                     AWDEWKTSVKETIRSYLSQEIRLTQPDACVDNVAIFYAQANQNLSRLLSED"
     gene            1455..3521
                     /locus_tag="VE844_21960"
     CDS             1455..3521
                     /locus_tag="VE844_21960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011110743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/UbiB family protein"
                     /protein_id="HZC03906.1"
                     /translation="MDAPVRRVMVGTDRSETADQAVLWAASFAERYGAELIVVQIIVS
                     HSPAVTEYGAAERTRAVAAGNELALYARELAGERGRALLIVDDDPAMAIVRAAEQEAI
                     DVLVVGNMGMAGRKEFLLGNIPNRISHNARCIVVIVNTFPVGDRPAGETPTVIRSTEP
                     APSEPRLMARGAQIAAVMSKHGLQELFGRSDEPGAAGRRRQAKRLRAALEELGPTYSK
                     LGQVLSTRPDLLPAEYIEELAMLQDHVAPMTEEEVVQVTEQELGVPWEDVFDSIDPRP
                     LAAGTIAQVHRATLASGDRVVLKVQRPTAREVIEQDLALLEVFAEKVGERPALNQVID
                     MEAVSKHLSASLRRELDFRQEAENIERMRSVLEGYDRLAVPSVYRDLSTSRLLLMEEI
                     RGVPIAQAPEGPERTQAARQLLESFYRQILVEGVFHADPHPGNLMWWKERIYFLDFGM
                     VGAVGADFREQLMLLLMALWQEDTGFLTDVTLMMTGAIDRSDLDVFRFQAEIGEVMAN
                     YRTAALAEIQIGPILQEMSAIALRYGVPLPASLTLTTKALAQVQLATAELDPKLDPFE
                     VAGKFLMRWIVKSMSTTLDPKTLVYQSQKLKVRATRVIEAVERLLGARPGQKLEVNFR
                     AATLESTLHQAGRRLALGLTAGAAGLATGLTALSTEVAGWVPVTFGVIGGVLTVGLLI
                     DLVRRH"
BASE COUNT          728 a         1040 c         1069 g          711 t
ORIGIN      
        1 atgtctaagt ttgataaatt gtggacagcc agatgcggcg gtttaaatcg ccctgccaag
       61 ctcaatgctt tctctccgcc cacggccccc tcaacaatct tttctacctg cgctgccatc
      121 ggataccggc tgcccagtat cgggttgctc gtcaagaagc gtttaacact tggtcgcagg
      181 taaagtgcgt cctaaaagca gcataacagc tacactacgc ctgcgtcata cggcaaatac
      241 gctcttagaa catcaacttg acagtacccc tcacagccca ggcgaagatg ctcgtgtcca
      301 tactgagttc gctcgtgaaa ggtctgaatc gcatgcaaga gatagtgggg ggattgcgcg
      361 cgagttgggc aaacgccacc gtgactataa gatagctcgg gccgactacg acaaggtctt
      421 acgtgctcta ctacggacac ttgaggagtt cctcgccgag gatcttacat cagagatccg
      481 ccatgcctgg ataaccgtct atggcatgat agctgagacc atgattgagg cggccgagga
      541 ctgaaaaaat acgccctaat cctcgctgag caatcgtgat agattctggt tggcttgtgc
      601 ataaaatatg gctacattgt ccacgcaagc gtcaggttga gtgagacgga tttcctggct
      661 caaataggat ctaatagttt ctttaacgga tgtcttccat tcatcccaag ccaccttgcg
      721 ccctgttaac gtttcgcact cttggtgcaa ctttttcaca ttagaccgaa aggtttcgta
      781 atcgctcgcg agaccagcga gatccgctgc tcgaactgct ttttcctcat tagaggtgaa
      841 ctgcgtgtct cgctgggtgc taagaatggc agaagccacc cttttgatgg tatcttcaga
      901 aatagcttca gcacgcaagc actgaacagc aaggtgggca gaatactctt ccttactagt
      961 aaagcccttg ctgatatggc tctcatggta acccgcatca tgaaaaagta gtgcgtaata
     1021 gactattacg ccattaattg gaacgccctc cttaaggcaa cgttccacca gtattgctcc
     1081 tgctgccaac gtttccagta catggttgaa gttatggtag ggcatttggt cgctataaag
     1141 ttctgctgcg acttgctcaa gatgagcgtt acggatttca tcgaaatgca ttatggttca
     1201 ttccaaggct ctttgagggt ttttaaccta acagttttgt tgcatgatta gtcagggaag
     1261 caggagcaca agtaatttta aacttaaatt ccgcagttgg cttgtggtcg gtggtatagg
     1321 ccgttgccaa atcgcgttga attttctatc cttggcaagg gctatcaacg ggcgcggcgg
     1381 atcctcgaag agaagcgttc catatgagac acactgtcaa tgcacccatg cacgctcgac
     1441 cgaagagcga ccccttggac gccccggtgc ggcgcgtgat ggtggggacc gatcggtctg
     1501 agacggcgga ccaagcggtc ctgtgggccg cctcgttcgc cgagcgctac ggtgccgagt
     1561 tgatcgtcgt gcagataatc gtatcgcaca gcccggccgt caccgagtac ggagccgccg
     1621 aacgcacccg agcggtcgca gccggcaacg agctcgccct gtacgccagg gagctcgccg
     1681 gtgagcgcgg tcgtgcgctg ctcatcgtcg atgacgatcc ggcgatggcg atcgttcgcg
     1741 ccgccgagca agaggcgatc gacgtcctcg tggtcggcaa catgggaatg gcagggcgga
     1801 aggagttcct gctcggcaac atccccaacc gcatcagcca caacgcccgc tgtatcgtgg
     1861 tcatcgtgaa cacgttcccg gtcggcgatc gcccagcggg ggaaacgccg accgtgatcc
     1921 gaagcaccga gcccgcgccc tccgagcccc ggctgatggc gcggggcgcg cagatcgcgg
     1981 cggtgatgag caaacatggc ctgcaggagc tgttcggccg gtccgacgag ccgggtgcgg
     2041 ccggccggcg ccggcaggcc aagcggctgc gagccgcgct cgaggagctc ggcccgacct
     2101 actcgaagct cgggcaggtg ctatcgaccc gcccggacct cctgccggcc gagtacatcg
     2161 aggagctcgc gatgctgcag gaccacgtcg cgccgatgac cgaggaagag gtggtccaag
     2221 tcacggagca ggaacttggg gtgccttggg aggacgtgtt cgattcgata gatcctaggc
     2281 ccctcgccgc cggcacgatc gcccaagtcc accgtgcgac gctggcgagc ggtgaccggg
     2341 tcgtcctcaa ggtacagcgg ccgacggcac gcgaggtgat cgagcaggac ctcgccctac
     2401 tcgaggtgtt tgccgagaag gtcggggagc gccccgctct gaatcaggtt atcgatatgg
     2461 aggccgtgtc caagcacttg tccgcgtcgc tgcgccgcga gctcgacttc cgccaggagg
     2521 ccgaaaacat cgagcggatg cgtagcgtgc tcgaaggcta cgatcgcctc gccgtcccca
     2581 gcgtgtaccg ggacctgtcc acttcccggt tgctgttgat ggaagagatc cggggcgtac
     2641 cgatcgcgca ggccccggaa ggtccggagc gcacccaggc cgctcgccag ctgctggaaa
     2701 gcttttaccg gcagatccta gtggaggggg ttttccatgc cgacccccac cccggcaacc
     2761 tcatgtggtg gaaggagcgc atctacttcc tcgacttcgg gatggtcgga gcggtggggg
     2821 ccgacttccg cgagcagctg atgctgctgc tgatggccct gtggcaggaa gataccggtt
     2881 tcctcaccga cgtcacgctg atgatgaccg gcgccatcga ccgcagcgac ctggatgttt
     2941 tccggttcca ggccgagatc ggggaggtga tggcgaacta tcgcaccgcc gcgctcgccg
     3001 agattcagat cgggccgatc ctgcaggaga tgagcgcaat cgcgctgcgc tatggggtgc
     3061 cgcttccggc atcgctcaca ctcaccacca aagcactcgc gcaggtacag cttgcgacgg
     3121 ccgagctcga tccgaaactc gatcccttcg aagtggccgg gaagttcctg atgcgatgga
     3181 tagtcaagag catgagcacc acgctcgacc cgaagacact tgtctaccaa tcgcagaagc
     3241 tgaaagtgcg ggccacgcgc gtgatcgagg cggtcgaacg ccttctcgga gcccgccccg
     3301 gccaaaagct cgaggtgaac ttccgggcgg caacgctcga aagcaccctt caccaggctg
     3361 gacgccgact ggcgctcgga ctgaccgcgg gagcggccgg gctcgccacc ggcctcacgg
     3421 ccctatcgac agaggtggcc ggttgggttc ccgtgacctt cggtgtgatc gggggtgtgc
     3481 tcaccgtcgg gctgctcatc gacttggtgc ggcggcactg aacgctcgat gatcagggcc
     3541 gaagttgg
//
LOCUS       DASQSL010002186         1925 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_204770, whole genome shotgun sequence.
ACCESSION   DASQSL010002186 DASQSL010000000
VERSION     DASQSL010002186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1925)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1925)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1925
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204770"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(152..>1925)
                     /locus_tag="VE844_21965"
     CDS             complement(152..>1925)
                     /locus_tag="VE844_21965"
                     /inference="COORDINATES: protein motif:HMM:NF033527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Tn3 family transposase"
                     /protein_id="HZC03907.1"
                     /translation="NFRRYFRHFIHLNFRGSPGSRGLLDAIELLRKLDAGQIKTLPAE
                     VDISFVPAAWHSRLMANSPAIDRRTWEIALALALREALRAGEIYLPDSRRHVSFWDLC
                     YDRAAWEDQRPAAYQALGLPVEADSVLTKLVNEFRVTAERMALNLPTNPFAEIVAGEL
                     CFKRDPALEESPETPLLRQLLAHSLSKVRIERLLMTVDARCHFTAALKPLGRAPAYPR
                     RHYAARLAALTAHGTNVGVWTMADSTEGMTVDQLQEVSRTCLRPETIRAANAILVNEV
                     RSLPLSAYYGDGRLSSSDGQRFGVQRSSLLTALYPRYFGYYDRAVTVYTHMSNQLSVF
                     ATEAISCAEREAPYVLDGLLENDTELDIQAHTTDTHGFTEQIFGLCFLLGFSFMPRLK
                     DLASQQLYAPEGREVPEGLRPLFSGTVDLDLIREQWDPLVRVAASLKNRIVPAHVVAK
                     RLVSAGSSNRLAKALTHLGRLVKTTYLLGFIDDPALRRMVGLQLNHGEFRQKLARHTF
                     FANQGEFRSGDYFEIMNKASCLSLLSNAILVYNTVHIGNILDQAQAADRVFPPEAIAH
                     VPPLLFDHVIVNGTYDFSDAKSIR"
BASE COUNT          414 a          551 c          595 g          365 t
ORIGIN      
        1 aaactgcggg ggctgatccg gaccctcacc gaacatcccg gtctgcaaaa ggcactgggc
       61 gggacggtgg ccctcaatac ggaccacacg ccacttagct acggaaacta tcgctaaggt
      121 attatacgca taatttatac gtttaatttg tctatctaat cgatttggca tcggagaagt
      181 catacgtccc attgacaatc acatggtcaa acaacagggg tgggacgtgt gcgatagcct
      241 caggtgggaa cactcgatcg gccgcttgcg cctggtcgag aatattgccg atgtgaaccg
      301 tgttatagac gaggatggcg ttcgacagca agctcaggca actggccttg ttcatgatct
      361 cgaagtaatc gcccgaacgg aactcgccct gattggcaaa gaaggtatgg cgggcaagct
      421 tctggcggaa ttcgccatga ttcaactgta acccgaccat gcggcgaagc gctggatcgt
      481 cgataaagcc cagcagatac gttgtcttca ccagccgccc caggtgcgtc agcgccttgg
      541 cgaggcgatt gctgctgccg gcgctgacca agcgcttggc gacgacgtgg gcgggtacaa
      601 tgcggttctt cagcgacgcg gccacccgga ccaggggatc ccattgctcc ctgatcagat
      661 ccaggtccac ggtaccgctg aagagcggcc ggagaccttc gggcacctcc ctaccttcag
      721 gtgcatagag ctgttgcgac gccaagtcct ttagccgcgg cataaacgaa aagccgagca
      781 aaaagcataa cccaaagatc tgttcggtaa acccgtgggt atcggtcgtg tgggcttgga
      841 tatcgagttc agtatcgttt tcaagcagtc catccagcac atagggcgcc tcgcgctcgg
      901 cgcaggagat cgcctcggtg gcgaacacgc tgagttgatt cgacatatgg gtatagaccg
      961 taaccgcacg atcgtagtag ccgaagtaac ggggatagag cgccgttaac agggagctgc
     1021 gctgcacgcc aaagcgctgc ccatcagacg aggacaaccg gccatcgcca tagtaggcgc
     1081 tgagcggcag ggaacgcacc tcgttcacga gtatcgcatt ggcagcgcgg atcgtctcgg
     1141 ggcgcaagca ggtgcggctg acctcttgca actggtcgac cgtcattccc tcggtgctgt
     1201 cagccattgt ccagacaccg acgttggtgc catgggcggt cagcgctgcc agccgcgccg
     1261 catagtgccg gcgcgggtag gccggagcgc ggccgagcgg tttcagggca gcggtaaagt
     1321 gacagcgtgc atcgaccgtc atgagcaggc gttcgatccg taccttggac aggctatgcg
     1381 caagtagctg gcgtagcagg ggtgtttctg gcgattcctc cagtgccgga tcgcgcttga
     1441 agcataactc gccggcaacg atctccgcga aggggttggt gggcaggtta agcgccatgc
     1501 gctcggccgt tacccgaaac tcattgacca gtttcgtaag cacgctatct gcctccacgg
     1561 gcaagcctag cgcctggtag gccgcaggcc tttggtcctc ccatgcagcg cggtcgtagc
     1621 agaggtccca gaacgagacg tgccggcggc tgtcgggtag gtagatctca ccggcgcgca
     1681 aggcctcgcg cagtgccaac gccagcgcga tctcccaggt ccgtcggtcg atagccggag
     1741 aattggccat aagccggctg tgccatgctg caggcacaaa cgagatatcg acctcagcgg
     1801 gtaacgtctt gatctggccg gcatcaagtt tgcgcaggag ctcgatcgcg tccagcaacc
     1861 ctcggcttcc gggagagccg cggaagttaa gatgaatgaa gtgccggaaa tagcgccgga
     1921 agttc
//
LOCUS       DASQSL010002187         1085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_176911, whole genome shotgun sequence.
ACCESSION   DASQSL010002187 DASQSL010000000
VERSION     DASQSL010002187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176911"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(746..>1085)
                     /locus_tag="VE844_21970"
     CDS             complement(746..>1085)
                     /locus_tag="VE844_21970"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HZC03908.1"
                     /translation="RRELKADRVALIRVPDLALLGRHSHYELSTSDRGVIELVTKTTQ
                     PTLTVTGPRRLPQARTNARWMNSLAIPILRNERAVGVVYATRNSTEPFTEEDLHWLTA
                     YTSTASPIFD"
BASE COUNT          198 a          277 c          359 g          251 t
ORIGIN      
        1 gcagagagga acgcagagca tcgcggtcca cgtcgcgccc gggtatctcc tccccctgaa
       61 cttccagtaa cgtcaggctc atcccccggg ctggtaggct agtgtcccgt cgaaatccca
      121 gaccagatac ttcatactga catcatgccc ctccaggagg gctcccgcta ccatcccgtg
      181 ccgcaaccaa gcgcccttct tgccctgcgc taccgaaacg aactaccaat cttcgcgggt
      241 gcatctcgac attagattta cctaaccttc tagaaacgat tcacggaagt ttcgtaccat
      301 agtatcgttt ggtttaagct caacatattg tactcggtgt agagaagtga aggatatgtc
      361 gtgctgttat tcgatcgaag actgttgccg gcttaggtat aacgattatc gagagttgca
      421 gggtggctgg cggggtgcta acttttcccg caagcagttc ccgagggccc gtggcttgct
      481 tcaaagctag ggttcaggca tgggaaccgt tacgggcctc atcgactggg aggggtggtg
      541 gggttcggct caacaggccc cttttgggga ggggctgatt gggcgtcccg gcagcgctgc
      601 cgggacgctt ttgtttaggt ttcaggtcat aggtcagctt ctggcctgtt gggccctctt
      661 catcctagat cgcctagatc ggcgttttga caggagtggg aggtatctac atggagcggt
      721 tgctgccatc gattcttgct gaagtttagt cgaagattgg gctggccgtg ctggtatagg
      781 ccgttagcca gtggaggtct tcttcagtga agggttcggt ggagttgcgg gtagcgtaga
      841 cgacgccaac ggcacgttcg ttgcggagga tcgggatggc gagggagttc atccagcggg
      901 cgttggtgcg ggcctggggg agccggcggg ggccggtaac ggtgagggtg ggctgggttg
      961 tcttggtgac cagctcgatc acgccgcggt ccgaggtgga gagctcgtag tgggaatgtc
     1021 ggcccaagag ggcgaggtct gggacccgga tcagggcgac tcgatccgcc ttaagctcgc
     1081 gccga
//
LOCUS       DASQSL010002188         2017 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_176918, whole genome shotgun sequence.
ACCESSION   DASQSL010002188 DASQSL010000000
VERSION     DASQSL010002188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2017
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176918"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(274..1341)
                     /locus_tag="VE844_21975"
     CDS             complement(274..1341)
                     /locus_tag="VE844_21975"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017417023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HZC03909.1"
                     /translation="MRWTHVLDEYFRHRAAQDLFSGAVLITQGATQLYARAYGYASRA
                     WRVPNTLDTRFDTASVTKLFTAIATLQLIDRGLLAFDTPVVKRLGLEGTVLSKEINVL
                     HLLTHTSGIGDDADEEAGERYEDVWKTKPNYSVIETRDFLPQFVNKPANFPPGEGCRY
                     CNCGYILLGLLIETISGMTYRDYVRAHVFAEAGMTASGFFRMDRVNHDVAEGYDPIRD
                     ATGQIVDWKMNIYSFPSIGSPDSGAHVTVADLDRFLRAVRAGELLSPELTGAFLTPQV
                     VHRRRDTWTEMYGYGLWFYVDQASKVVCFEKEGVNVGVSGLIRHFPDRDITVALLSNM
                     ENGAWDPVWKIHEMVVEGQIT"
BASE COUNT          424 a          571 c          588 g          434 t
ORIGIN      
        1 ctccgcttgc acaacacgtc ggggggcatc ctttgctaga tacaaccttc cgagaacacc
       61 tgaaagacga acttcttaga actccgttat ggcgaagttc taagaattgc ccttttacgt
      121 actagggtga ataaggcgag aagaaaggga cccaaccaca aaggccttac cccttccaac
      181 cctcaatgct tatgccttgt gcctcttcta agggctaggg cgtgtctgat gaacagcagg
      241 gtaagatcct gctagcttga actgtttact gggtcacgta atctggcctt cgactaccat
      301 ctcatgaatc ttccagacgg gatcccatgc gccattttcc atgtttgata ggagtgcaac
      361 ggtgatatcc cgatccggaa aatggcggat caggccgctg acgccaacgt tcaccccctc
      421 tttttcaaag cagacgacct tgctcgcctg atcaacgtag aaccataacc cgtacccata
      481 catctccgtc caggtatctc tccttcgatg gacgacttgt ggggtgagga aggcgccggt
      541 cagttcgggc gaaaggagct cgcctgccct cactgcccgc aagaaccggt ccaggtcggc
      601 gaccgtgaca tgggcaccac tatccggcga cccgatcgat gggaaggagt agatgttcat
      661 tttccagtcc acgatttgcc cggtcgcgtc gcgaatcgga tcgtatcctt cggcgacgtc
      721 gtggttgacg cggtccatcc ggaagaaacc ggaggcggtc atccccgctt cggcgaatac
      781 gtgggcgcgg acgtaatcgc ggtaggtcat cccgcttatg gtttcgatca ggaggcccaa
      841 gaggatatag ccgcaattgc aatagcggca tccttctcct ggggggaagt tggccggctt
      901 gtttacgaat tggggcagga agtcacgggt ttctattacg gagtagttgg gcttcgtctt
      961 ccacacatct tcgtagcgtt cgcccgcctc ttcgtcggcg tcgtcgccta tgcccgaggt
     1021 atgggtcagc aagtgaagca cgttaatttc cttcgagagc accgtgcctt ccaggcccag
     1081 gcgcttcacc acgggcgtgt cgaaggccag cagccctctg tcgatcagct gtaacgtggc
     1141 gattgcggta aagagtttgg taaccgaggc cgtatcgaag cgcgtatcca gggtgttggg
     1201 cacgcgccag gcgcggctgg cgtaaccgta ggcgcgggcg tacaactggg ttgcgccttg
     1261 cgtgatgagc accgcgccgg agaacagatc ctgggcggct cggtgccgaa aatactcgtc
     1321 cagtacgtgg gtccaacgca tgatgccctt cccaagcgct ccatcgtgcc ccggtaacct
     1381 tcgacatcgc cgtggaggag agccggatag ccacggtgcc cttcgaagca acatggtcgc
     1441 accttcggac gatcgtagca attactagcg cgtattgcgt agcctcttgg gccgggcaag
     1501 gcgaacttcc tagaactccg ttatggcgaa gttcgtcttg ccccatggcc ccgtcccaga
     1561 cagcccagga ccgcacgatg gtagtcctgg accgatggat attacgtttc ttatgtacag
     1621 atcaccgtga tgtacataag aaacgccctg tggcttctat ggcttaggac cgccccgata
     1681 cgaatcggaa agccggtcgc ttttcctcgg aggggggtga ggggcgcccg gcttaacgat
     1741 aatcagattg tactaccctg gagggcccca gcatatagcg caaacgaggt atttcttcac
     1801 aaacagagag gggcccgtga ttcgagcaag gagggttgag gtgcacccac ccacgttggt
     1861 aatatgttcg ccgctgggtc ggctgccgaa taatctagag ggggcgcggc cggccctctc
     1921 tagcgcctct ctctttagcg cctctagacc aaatgaaagg gctgggaccc cgtaggttgg
     1981 accggcccgt aaatgacggg cgaggggcag gatagag
//
LOCUS       DASQSL010002189         1356 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_122892, whole genome shotgun sequence.
ACCESSION   DASQSL010002189 DASQSL010000000
VERSION     DASQSL010002189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122892"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..568)
                     /locus_tag="VE844_21980"
     CDS             complement(<1..568)
                     /locus_tag="VE844_21980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03910.1"
                     /translation="MNDRMGTGMAEATRLTRAGQIIEATAVIQRTLRGMVAPDASSHT
                     VNEPIDVPFHVFDAAPLSPEAARQGPDQQMRTGAVITLPPPDVAVSPHESGSASAERT
                     DTRADLCEEDQYSGAPPTLQRTPGRRPAGSTLAEPEWAARLRATLRSPHGGPGGPLSM
                     PMPEQAHREICPGGQFIEGSYTNPAGTRT"
     gene            complement(600..989)
                     /locus_tag="VE844_21985"
     CDS             complement(600..989)
                     /locus_tag="VE844_21985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015145327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="HZC03911.1"
                     /translation="MAGETEKITINLGFVDLGQIDLLVQEGFYSNRTDFIRTAIRNQL
                     VTHAETVEQTVARKTLVLGLQHYTRRDLEAVRAAGQKLQIQVLGLVSIADDVSPELAQ
                     ATIDSLTVLGALRASAEVKAALADRIH"
BASE COUNT          293 a          377 c          395 g          291 t
ORIGIN      
        1 aggtgcgggt tccggctggg ttggtatagg atccctcaat aaactgtccc cctggacaaa
       61 tctcgcggtg tgcctgctcc ggcatgggca tagagagtgg cccgccaggt ccaccgtgag
      121 gtgagcgaag ggtagcgcgc aaacgagcag cccattcggg ctcagccagc gtggacccgg
      181 caggtctgcg accgggtgtg cgctggaggg ttggaggtgc cccgctgtac tgatcctcct
      241 cacaaagatc tgctcgggta tcggtccgct cggcggatgc actcccgctc tcatgaggtg
      301 acactgcaac gtcaggcggt ggtagcgtta ttactgcacc ggtgcgcatt tgctggtctg
      361 gcccctgtct cgccgcttct ggggacagtg gagccgcatc aaagacgtgg aaggggacgt
      421 caatgggttc attgacggtg tgcgacgaag cgtccggcgc aaccatgcct cggagcgtgc
      481 gctggataac agcagtggcc tcgatgatct ggcccgcacg cgtgagtcgg gtggcttccg
      541 ccatcccagt gcccattcta tcattcataa tctatggcct ccttcgtgtg tgatagtgtt
      601 tagtggatcc gatcggctaa ggccgctttg acttccgcac tggcccgcaa ggcccccagc
      661 acggtgaggg agtcgatggt ggcctgggcc agttcgggag acacgtcatc ggcaatgctt
      721 actaagccca gcacctggat ctgaagcttc tgtccggccg cccggaccgc ctccaggtca
      781 cgacgggtgt agtgttgcag gcccagcact aaggtcttgc gcgctaccgt ttgttcgacc
      841 gtctcagcgt gggtgacaag ttggttgcga atcgcagtac gaatgaagtc cgtgcgattt
      901 gaataaaaac cttcctgcac taacaaatcg atctgtccga gatcgacaaa gcccaggtta
      961 atcgtgatct tctccgtttc acccgccatt ccatctcctc accatcctat taacatctat
     1021 atagatggta tattactgga aagccacgcg atgtcaagaa gcggaacgcg atcacttcaa
     1081 aggggtatgt gccaacgatg ccatgaaacg gcggcaagtc gcgctggatg tggtgttatg
     1141 agatgatacc aatgatcaaa tcagcacacg agcaccccaa gcaccgaaat gccgcttcac
     1201 ttatacccaa acgtctacgc atccggctcg gtgccgaagg attggaaacc actcaagagt
     1261 ggcacaatca aatattcggt gcgcaattcg gtagtgcgct gttacctcca acaactactg
     1321 gctggaaagt ggcaaaaggt gatcaagaag ggtaac
//
LOCUS       DASQSL010002190         1482 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_204814, whole genome shotgun sequence.
ACCESSION   DASQSL010002190 DASQSL010000000
VERSION     DASQSL010002190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1482
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204814"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..219
                     /locus_tag="VE844_21990"
     CDS             <1..219
                     /locus_tag="VE844_21990"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIR domain-containing protein"
                     /protein_id="HZC03912.1"
                     /translation="AAMNPDQESAWWREFSFVMPATTKPMSVRSITRLWAIEGFELWL
                     DEEDLLPGQEWAREIPRALQTSDFILIV"
     gene            327..>1482
                     /locus_tag="VE844_21995"
     CDS             327..>1482
                     /locus_tag="VE844_21995"
                     /inference="COORDINATES: protein motif:HMM:NF016847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03913.1"
                     /translation="MIKPFHQHNLMTPTRCDPMMAQAARDWSVFKQIFADHWDEFKRV
                     RPRYQTAYYDTLVAKMLDCGNPDKMGYIEYRCEQCGQGNHLVSMSCKSSLCLRCAKVH
                     VDNWVSQVSKALHEGVIYRHIILTVPAMFRTPFYQHAEALLGALMRCSAQCLNDFYSE
                     VRGKVLKGGYITVVHTHGRNGQYHPHVHVLATRGGYDVEAESWEHLSFLPYDLLRHKW
                     QWHLMTLFRKTLASETIEPLVDLCFRKYPNGLVSRVQRGQVPSQYQSLASYVAKYVVS
                     PPISVRRIDCYDGERVTYHYRSHRTERTTHETVDVLTFIGRMIQHTRPKGFKRIRYYG
                     VQATTTFAKVKEAIQAALAKVEGVVKGAVKIVARLTYRERYEQSTGRDPLL"
BASE COUNT          340 a          375 c          437 g          330 t
ORIGIN      
        1 gctgcgatga atcctgacca ggagagcgca tggtggcgcg aattttcctt tgtcatgcca
       61 gcgacgacaa aacccatgtc cgtgaggtct atcacccgcc tttgggccat tgaagggttc
      121 gaactgtggt tggatgaaga agacctcttg ccggggcaag aatgggcgcg ggaaatccca
      181 cgggcactgc aaacctccga ctttatcttg atcgtatagg aaaatgcatt ttcccgatcc
      241 cagaagtcac tatgattcaa gggtaaacaa gtcgagagag ggtgtccggc tatagaccga
      301 tgaggggtag acgaagcggc tgaagcgtga taaaaccgtt tcaccaacac aatctcatga
      361 cccccactcg gtgcgacccg atgatggcac aagccgccag ggactggagt gtcttcaagc
      421 agatctttgc cgatcactgg gacgagttta aacgcgttcg tcctcgttat cagacggcat
      481 actatgacac gctggtggcc aagatgctcg actgtggcaa ccccgacaaa atgggctata
      541 tcgaataccg ctgtgagcag tgcggacagg gcaaccactt ggtgtccatg agctgtaaat
      601 cgtctctgtg cttgcggtgt gccaaagtcc atgtcgacaa ctgggtgagc caggtgagca
      661 aggctctcca cgagggcgtg atctatcgac atatcatcct gactgtcccg gccatgttcc
      721 gcacgccttt ctaccaacat gctgaagcgt tgttgggtgc gttgatgcga tgcagcgcgc
      781 agtgcctcaa tgatttctat agtgaagtcc gaggtaaggt cctcaagggg ggctatatca
      841 cggtcgttca cacgcatgga cgcaacggtc aatatcatcc ccatgtccat gtgctggcga
      901 cccgtggggg ctacgatgtg gaggccgaga gttgggagca tttgtcgttt ttgccctatg
      961 acctcttacg tcataaatgg caatggcatc tgatgaccct gttccgaaag accctggcaa
     1021 gcgagacgat cgagccgttg gtggatttgt gtttcaggaa gtatcctaac ggtctcgtga
     1081 gccgcgtgca gcggggacaa gtcccgtctc agtatcagag tttggccagc tatgtggcca
     1141 aatatgtggt gagtccgccg atctcggtga ggcgaattga ttgctacgat ggcgaacggg
     1201 tcacgtacca ttaccggtct caccgcacgg aacggaccac tcatgagacg gtcgatgtgc
     1261 tgacatttat tggccgtatg attcagcata cgaggcccaa agggttcaag cgtattcggt
     1321 attatggggt tcaggccacg acgacctttg ccaaggtgaa ggaagccatt caagcggccc
     1381 tggccaaggt cgagggcgtg gtcaagggag cggtgaagat cgttgcccgg ctgacctaca
     1441 gagagcgcta tgagcagagc acaggccggg atcccttgct ct
//
LOCUS       DASQSL010002191         1367 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_204828, whole genome shotgun sequence.
ACCESSION   DASQSL010002191 DASQSL010000000
VERSION     DASQSL010002191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1367
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204828"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..983
                     /locus_tag="VE844_22000"
     CDS             <1..983
                     /locus_tag="VE844_22000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011239378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /protein_id="HZC03914.1"
                     /translation="AILMLAPETNGEVAHKGWQSLSKKTGMDHTHLSSSRREDKLSFK
                     DLVVQPRKIITAPTWSGVESEKVSYNAGYTNIHERIPFRTLTGRAHFYQDHEWMLDFG
                     EGFCTFRPPVDLRATEGILDRVKDKSHLVLNWITPHSKWGIHSTYNDNLHMLTLFRGG
                     PVVWVSEKDAKSIGLKDNDWVEALNTNGATVARVVVSQRVPSGMAMMYHAQEKIVNVP
                     GSNTTGRRGGILNSVTRVVVKPTHMIGGYAQLSYGFNYYGTVGSQRDEYVVLHKIEDS
                     AIDWLERPLTLERELQLNPPGIIPIPTLPLTKGEDKGGGRKASLIEKEVA"
     gene            983..>1367
                     /gene="narH"
                     /locus_tag="VE844_22005"
     CDS             983..>1367
                     /gene="narH"
                     /locus_tag="VE844_22005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004301710.1"
                     /note="with NarGJI catalyzes the reduction of nitrate; the
                     beta subunit is an iron sulfur cluster containing electron
                     transfer subunit; one of 3 nitrate reductases in E. coli
                     and in E. coli is expressed when nitrate levels are high;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit beta"
                     /protein_id="HZC03915.1"
                     /translation="MKVRANFAMVMNLDKCLGCHTCSVTCKNVWTNRVGMEYVWFNNV
                     ESKPGIGYPKHWEDQGKWNGGWIVKEDGKLELKAGGRTKRLMNLFMNPDLPEIDDYYE
                     PFTYDYAHLQTSPLAEAAPTARPRSQ"
BASE COUNT          309 a          419 c          405 g          234 t
ORIGIN      
        1 atgcgatcct tatgctcgcc cccgagacca acggggaggt ggcccataag ggttggcagt
       61 cgctcagcaa gaagaccggc atggaccaca cgcatctctc tagttctcgg cgcgaggaca
      121 agctcagctt caaggacctc gtggtacagc cgcgcaagat catcaccgca ccgacctgga
      181 gcggcgtcga atcggaaaag gtcagctaca acgcgggcta taccaacatc cacgagcgca
      241 tcccgttccg gacgctcacc ggccgggcgc atttctacca ggaccacgag tggatgctcg
      301 atttcggcga gggtttttgt accttccgcc cgcccgtcga tctcagggcg accgaaggca
      361 tcctcgatcg ggtcaaggac aaatcccacc tcgtgctcaa ctggatcaca ccccatagca
      421 aatgggggat ccactcgacc tacaacgaca acctgcacat gctgacgctc ttccgtggcg
      481 gcccggtggt gtgggtgtcg gagaaggacg ccaagtccat aggtctcaaa gacaacgact
      541 gggtcgaggc cctgaacacg aacggggcca cggtggcgcg cgtggtggtg agccagcgcg
      601 tgccctccgg catggcgatg atgtaccacg cccaggagaa gatcgtgaac gtcccgggct
      661 ccaacaccac cggcaggcgc ggcgggatcc tgaacagcgt cacgcgtgtg gtcgtcaagc
      721 ccactcacat gattgggggt tacgcgcagt tgagctacgg ctttaattac tatggcaccg
      781 tcggatcgca acgggatgaa tacgtggtgc tccataagat cgaagacagt gccatcgatt
      841 ggctggaacg gccgctcacc ctggagcgcg agttacagtt gaatccaccg gggatcatcc
      901 ctatcccaac cctccccctt actaaggggg aggataaagg agggggtcgc aaggcaagct
      961 taatcgagaa ggaggtcgcc taatgaaggt ccgcgctaat ttcgccatgg tcatgaatct
     1021 ggacaagtgc ctcggctgcc acacctgttc ggtgacctgc aagaacgtct ggaccaaccg
     1081 cgtcgggatg gagtacgtgt ggttcaacaa cgtcgagtcc aagcccggga tcggctatcc
     1141 caagcactgg gaggaccaag gtaagtggaa cggcggctgg atagtcaagg aagacggcaa
     1201 gctcgagctc aaggccggcg gccgcaccaa gcggctcatg aacctgttca tgaaccccga
     1261 tctgcccgag atcgacgact actacgagcc ctttacctat gattacgccc atctgcagac
     1321 gagcccctta gctgaggccg cgcccactgc ccgaccccgc tcgcaga
//
LOCUS       DASQSL010002192         1132 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_204838, whole genome shotgun sequence.
ACCESSION   DASQSL010002192 DASQSL010000000
VERSION     DASQSL010002192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204838"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(168..725)
                     /locus_tag="VE844_22010"
     CDS             complement(168..725)
                     /locus_tag="VE844_22010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03916.1"
                     /translation="MSSSDLIRWGAIGFMLSGVVWVVVGILDATRDPFTFPGPVAFLL
                     LVVALLLSALGLVGLHALQEGSYGRIGLAGFYTALVAIAVQILGAVGLLWGSGALGWL
                     VAPVGSSAKLVGFVLYGAATVQARVLPRWYGVLLIVFMPISAALGAYGNIWVGLVLLV
                     LGYVLWLWRGEVAQQPRRVSSRRVS"
BASE COUNT          242 a          374 c          303 g          213 t
ORIGIN      
        1 caaagaagct ttagaagtac cgagaagcta atgttaccga gtccgctgtc tccttgtttg
       61 tccgacattc agcgggccgg ggtccttatg ccggggtcct tatactaatc gtaggggctc
      121 cggcccttta ctaacgaatg ccgccgttat gagaacggcg gcgttgccta gctgacacgc
      181 ctggagctga cacgcctggg ttgctgggct acctcgcccc tccacaacca gagcacgtag
      241 cccaacacca gcaataccag gcccacccat atgttcccgt atgctcccaa ggccgccgag
      301 atgggcatga aaacgatgag caacaccccg taccaccgcg gcaacaccct cgcttgcacg
      361 gtagcggcac catagagcac gaacccgacg agcttggctg agcttcccac cggggccacg
      421 agccacccaa gggccccgct cccccacaag aggcccaccg cgcccaagat ctgcaccgcg
      481 atcgcgacga gcgccgtgta gaagcccgcc agtccgatac gtccgtagct accttcctgt
      541 agtgcgtgga gccctaccag ccccagagcc gagagcagca gcgcgacgac gagcaataag
      601 aaggcgacgg gcccagggaa cgtaaacggg tccctggtcg cgtcgaggat gcccacgact
      661 acccacacca ccccgctgag catgaaccct atcgcgcccc accgaatcag gtcagaagac
      721 gacataaagc tgcttcctcc ttgtgctcaa aacccgtcct acggatggat aatggcaccc
      781 agcgaaaccc ggcgcaatac ctaaattagg gtgctgcgat gccgtctgta gctactctgg
      841 gcggtgggtt ttctcatcct ctccccaccg cccttatctc tatggtttga aacgcgcatc
      901 acttgggtaa gggagtatcg cggacggcgg gttaggtggt tgggtggatc gcctccccct
      961 ccatgagtgc cgactctttc cttcctcgcc gcccgccatg tgtacgtggg cagtggggtg
     1021 agtaagggga aagcgggaac gggcactcca ccgcccttcg tttctctggt aagttaaaca
     1081 gggccacctg tagccaaatc ttatccattc cttaacgttt ccttagccta tt
//
LOCUS       DASQSL010002193         1895 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_177042, whole genome shotgun sequence.
ACCESSION   DASQSL010002193 DASQSL010000000
VERSION     DASQSL010002193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1895)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1895)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1895
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177042"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            216..965
                     /locus_tag="VE844_22015"
     CDS             216..965
                     /locus_tag="VE844_22015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011405187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZC03917.1"
                     /translation="MLELSKVTKVYGDVPVVWDVDLFIPAGQITIIIGPSGCGKSTLI
                     RIMNGLVPADRGSVCFIGAPVTPATALSLRLRMGYMIQDGGLFPHLTARRNVILMACE
                     LGWSPARINARVMQLTELTRFPIDALDRYPAQLSGGQRQRVALMRALMLDPELLLLDE
                     PLGALDPMIRYDLQTDLEAVFRGLGKTVVLVTHDLGEAGYFGDEIVLLNNGRIEQRGP
                     MAALLEAPQTPFVERFIRAQRSLFDSLRTKP"
     gene            962..>1895
                     /locus_tag="VE844_22020"
     CDS             962..>1895
                     /locus_tag="VE844_22020"
                     /inference="COORDINATES: protein motif:HMM:NF015995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter
                     substrate-binding protein"
                     /protein_id="HZC03918.1"
                     /translation="MIARIALLTVVAIGAARVSQAGEPSLVTVGSKVFTESVILGEIA
                     AHLLESEGLKVRHRSQLGGTQLLWSALLSGEIDLYPEYTGTLMTEILRSKVGPGADPG
                     ELQRVLLSYGVGMSEPLGFNNTYALGITTSRARQLGIAAISDLRRYPELKFGFSNEFM
                     DRLDGWHGLRRHYSLPQADVVGLDHNLAYRGLMSGAIDVIDLYTTDADIQYYRLTVLQ
                     DDGGYFPDYQAVLLYRADAAARVPSMSRAVKRLEGAIAQETMIAMNARAKLDRVPETQ
                     IAAEFLQKWLGLHRKPPIETLAMRLWKHTVEHISL"
BASE COUNT          365 a          549 c          573 g          408 t
ORIGIN      
        1 cgtgtggtgg agcatccatc tgtgggcggg cagtatcggg atggctgggg tggtcggcct
       61 gctgatgagt tttctggttg tgccaccgct cgtcaaagat taaggaaaat gcgggtctcg
      121 ctacgtgcat cggttgccat acgcttcggg ccaccggcat tacaatttac ttgaggccga
      181 cagattatct gcgctccaca gcgacttgac ctcccgtgct tgagctatca aaggtaacga
      241 aggtttacgg cgatgtgccc gtcgtttggg acgtcgatct attcattcca gcgggccaaa
      301 tcacgataat tatcggcccg agcggctgcg gcaagtccac gctgatccgg atcatgaacg
      361 gccttgtccc tgcagatagg ggctccgtgt gctttatagg cgcaccagtg acgcctgcca
      421 ccgcgttatc cctacgctta cggatgggct atatgatcca ggacggcggt ctctttcctc
      481 acttgaccgc gcggcggaac gtgatcttga tggcgtgcga gctggggtgg tccccagccc
      541 gtatcaacgc tcgcgtgatg caactcaccg agctgacccg atttcccatc gacgcgctcg
      601 atcgttatcc cgcacagctc tcgggcggac aacgtcagcg ggtagccttg atgcgggcac
      661 tgatgctgga cccggagctc ctattgctcg atgagccgct tggggccttg gatcccatga
      721 tccgctatga cttgcagacc gacctcgagg cggtctttcg cggcctcggt aagaccgtgg
      781 tgttagtgac ccacgatctt ggcgaggccg gctacttcgg ggatgagatc gtgctcttga
      841 acaacgggcg gatcgagcaa cgaggaccta tggcagccct tctggaagcg ccgcagacac
      901 ccttcgtcga acggttcatc cgagcgcagc gcagtctctt cgacagtctt cggacaaaac
      961 catgattgcg aggatcgcct tactgacggt agtagcgata ggcgctgcca gggtctcgca
     1021 agcgggggaa ccgtcgctgg tcactgtggg ctcgaaagtg tttaccgaat ccgtcatcct
     1081 cggtgagatc gctgctcact tgctcgaaag cgaaggcctc aaggtgaggc accgcagcca
     1141 attaggcgga acccagttac tgtggtcagc actgctctca ggcgagatcg atctctaccc
     1201 ggaatatacg ggtaccttaa tgacagagat cctgaggagc aaggtcgggc ccggggcaga
     1261 cccgggagaa ctacagcggg tgctcctcag ctatggtgtg ggcatgagcg agccgcttgg
     1321 gtttaacaac acctatgccc tcggcatcac cacctcgcgc gcccgtcagc tcggtattgc
     1381 cgctatctcg gacctgcgca ggtatcctga gctcaagttt ggcttcagca acgaatttat
     1441 ggaccggctg gatggctggc atgggctccg gcgccactac agtttgcctc aagcggacgt
     1501 ggtcgggctg gatcataact tggcctaccg gggcttgatg agcggcgcta tagacgtgat
     1561 cgatctctac accaccgatg ccgatatcca atactaccga ctcacggtgc tccaggacga
     1621 tgggggttac tttcccgact atcaggcggt gctgctctac cgtgccgatg ccgccgcgcg
     1681 tgtgccgtcc atgtccaggg cagtcaaacg gcttgagggc gctatcgcgc aggagacaat
     1741 gatcgcaatg aatgctcgag ctaagctcga ccgtgtgccc gagacccaga tcgctgccga
     1801 gttcttgcag aagtggttgg ggcttcaccg caagccgccg atcgagaccc tcgccatgcg
     1861 cttgtggaag cacacagttg agcacatttc tctgg
//
LOCUS       DASQSL010002194         1233 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_204967, whole genome shotgun sequence.
ACCESSION   DASQSL010002194 DASQSL010000000
VERSION     DASQSL010002194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1233
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204967"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..142)
                     /locus_tag="VE844_22025"
     CDS             complement(<1..142)
                     /locus_tag="VE844_22025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018980197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03919.1"
                     /translation="MQEFLGEREPAAELIDKIIYINRVAKVVKGGRRFSFSALVVVGD
                     RNG"
     gene            complement(164..550)
                     /gene="rplR"
                     /locus_tag="VE844_22030"
     CDS             complement(164..550)
                     /gene="rplR"
                     /locus_tag="VE844_22030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013074240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HZC03920.1"
                     /translation="MSDTVGLREQARRRRRERVRKKVRGTPTRPRLSVFKSAKHISGQ
                     LIDDIHGHTLAAASSMSLPFRERVQNVEKASGGNVSGAKIVGEMIAEQARALGITQIV
                     FDRNGFLYHGRVKALADGAREAGLEF"
     gene            complement(563..1099)
                     /gene="rplF"
                     /locus_tag="VE844_22035"
     CDS             complement(563..1099)
                     /gene="rplF"
                     /locus_tag="VE844_22035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019541844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HZC03921.1"
                     /translation="MSRIGKQPIDLPPSVEVTMEKSQIEVKGPQGRLTRTLPELINVI
                     LEDHKILVDKKVESKQARSLHGLTRTLIFNMVKGVADGFQKQLVVSGLGYRVQMQGKN
                     LQLAIGYSQPVIVTPPPGIEFEVGQRNLITVRGANKEQVGQIAAEIRNLRPPEPYKGA
                     GIAYANETIRRKVGKAGV"
     gene            complement(1111..>1233)
                     /gene="rpsH"
                     /locus_tag="VE844_22040"
     CDS             complement(1111..>1233)
                     /gene="rpsH"
                     /locus_tag="VE844_22040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012410712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HZC03922.1"
                     /translation="QLPRVLNGLGVAIVSTSQGVMSDRECRRLNVGGEVLCQVW"
BASE COUNT          253 a          382 c          303 g          295 t
ORIGIN      
        1 gtccgttacg atcgccaacc actacgagag cgctaaagct aaaccgccgt cctcccttga
       61 cgactttagc gactcgattg atgtagatga tcttatcgat gagttcggcc gctggttccc
      121 gctcccctag aaactcttgc actgagagac tcctcttgtc cgcctaaaac tcgagacccg
      181 cctcacgagc cccatctgcg agcgccttga cccggccatg atacaagaag ccattgcggt
      241 cgaagacgat ttgcgtaatg cccaatgcgc gcgcctgttc cgcgatcatc tcccccacga
      301 tcttggcacc actaacattg ccgcctgagg ccttttcaac attctggaca cgttcgcgaa
      361 acggaagact catgctcgat gccgctgcca aggtgtgacc gtggatatca tcgataagtt
      421 gcccagaaat atgtttggcg ctcttgaaga ccgacaaacg cggacgtgtt ggggtacccc
      481 tgactttctt ccgtacacgc tctcgccgtc gtctccgtgc ttgttcccgt aaccccaccg
      541 tatcagacac ggccactctc ccttagaccc ctgccttgcc cactttgcgt cgaatggtct
      601 cgttcgcgta ggcaatccct gcccctttgt aaggctcagg cggtcttaag ttgcggatct
      661 cagcagcgat ttgacctacc tgctctttgt tggcaccacg caccgtgatg aggttacgct
      721 ggccgacttc gaattcaatc ccgggtgggg gggtaacgat caccggctgt gaatatccaa
      781 tggccaactg gagattcttg ccttgcatct ggacacgata gccgagtccg gacacgacga
      841 gctgcttttg aaagccgtca gcgactccct tcaccatatt aaagatcagt gtgcgcgtga
      901 gcccatgaag cgaccgagcc tgcttggact cgaccttctt gtcgaccaag atcttatgat
      961 cttcgaggat cacgtttatg agctccggca gggtacgtgt cagacgacct tgcggcccct
     1021 tgacttctat ctgactcttc tccattgtca cttcgacgct tggaggcagg tcgatgggtt
     1081 gtttgccaat ccgggacata atctctctcc ctaccacacc tggcacaaga cttcaccgcc
     1141 tacgtttaac cggcgacatt cgcggtcaga catgacccct tgggaagtgg agacgatggc
     1201 cacacccaac ccattgagga ctcgtgggag ttg
//
LOCUS       DASQSL010002195         2416 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_204977, whole genome shotgun sequence.
ACCESSION   DASQSL010002195 DASQSL010000000
VERSION     DASQSL010002195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2416
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204977"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..531
                     /locus_tag="VE844_22045"
     CDS             <1..531
                     /locus_tag="VE844_22045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013964445.1"
                     /note="catalyzes the formation of D-fructose
                     1,6-bisphosphate from D-fructose 6-phosphate in
                     glycolysis; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diphosphate--fructose-6-phosphate
                     1-phosphotransferase"
                     /protein_id="HZC03923.1"
                     /translation="SEGLKNAEGKFLSEAGTRDAFGHAQLGGVAPIIAQLVKARLRYK
                     YHWAVADYLQRAARHIASKTDVEQAYALGQAAVDLALAGKNAVLPIIVRRSDDPYHWT
                     IGEARLEEVANVEKKMPRDYISEDGFGITETCRRYLEPLILGEDYPPYEQGLPRYVEL
                     KNVPVPKKLATEFKLG"
     gene            544..1416
                     /locus_tag="VE844_22050"
     CDS             544..1416
                     /locus_tag="VE844_22050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03924.1"
                     /translation="MGLDVNGARWMLYAVTRGGVNLARTAMIGRQRLHLSVGELRRDL
                     TDFDFNLSLKEVYKLFQDQKGYAEPLLTFLGARELRSLDVSIYEQATDSVDLNVPIAD
                     GFKDRFTAVIDGGSLEHVFNFPEAIKSCMEMLAVGGHFICITPANNFLGHGFYQFSPE
                     LFFRIFSEKNGFRVVALVIFEDRPYAPWFEVADPAVVGKRVELVNNKPTYLAVIAQKI
                     QAVSIFQASIYQSDYVKTWDQANKLIARLTPLSPFAPHWMRSLYQTLSSRGAFSRFKP
                     SFFRKLKVLENSKF"
     gene            1438..>2416
                     /locus_tag="VE844_22055"
     CDS             1438..>2416
                     /locus_tag="VE844_22055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013292637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proton-translocating pyrophosphatase"
                     /protein_id="HZC03925.1"
                     /translation="MSVVALVFALACGLGAIVYGGKSVRWVLAQPEGSERMREIAAAV
                     QQGASAYLNRQYTTIGIVGAVLFVVMGLALNWKTAFGFLVGAVFSGAAGYIGMNISVR
                     ANVRTAEAAKGGLNAALTVAFRGGAITGLLVVGLGLLGVAGYYAILSMLTPAGEAVDL
                     APLVGLGFGGSLISIFARLGGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVG
                     DNVGDCAGMAADLFETYAVTVIATMLLGSLLLKGGGANVVVYPLALGGVSIIASMIGG
                     NYVKATEGGKIMNALYKGLIVAGGISAVAFLPVTALLMWNVEGYGVVSLY"
BASE COUNT          498 a          595 c          744 g          579 t
ORIGIN      
        1 tctgagggcc tgaagaacgc ggaaggcaag tttttgtcgg aggctggcac ccgcgatgcc
       61 ttcggccatg cccagctcgg tggggtcgcc ccaatcatcg cccaattggt taaggcacgg
      121 ctgcgctata aataccattg ggcggtggcg gattatctgc agcgggcggc ccggcacatc
      181 gcttcgaaaa ccgatgtgga acaggcctat gccttgggac aggcggcggt ggatttggcg
      241 ctcgccggca aaaatgccgt gctgccaata atcgtaagaa gatccgatga tccctatcac
      301 tggaccatcg gcgaggcacg gcttgaggag gtggcgaatg tggaaaagaa gatgccgcgc
      361 gactatatca gcgaggatgg tttcgggatc actgagacct gccgccgcta tcttgagccc
      421 ctgatcctgg gtgaagatta tcccccctat gagcagggtc tgcctcgtta tgtagagctc
      481 aagaatgtgc ctgtgcccaa gaagctcgct accgaattta aactcggtta aggagagcag
      541 gcggtgggtt tggatgtgaa cggtgcgcga tggatgctct atgccgtaac gcggggggga
      601 gtgaatctag cgaggacggc gatgatcggc aggcagcgcc tgcatttgag cgttggggaa
      661 ctgaggagag atttaacgga ttttgatttt aatctgagcc tcaaagaggt ttataagctg
      721 tttcaggatc aaaaggggta tgcagagccc ttgttaacct ttttaggcgc cagagagctg
      781 cgatcgctcg atgtctctat ttacgagcag gcgacggata gtgtggacct caacgtaccg
      841 atcgcggacg ggtttaaaga tcgatttacc gcggtcatcg atgggggctc cttggagcat
      901 gtgtttaatt ttccggaagc gattaaaagc tgtatggaga tgcttgcggt aggcggacat
      961 tttatctgca ttacacctgc aaataacttc cttgggcatg gcttttatca attcagtccg
     1021 gaattattct tcaggatctt cagcgaaaaa aatggcttca gggtagtggc cctggtcatc
     1081 ttcgaagaca ggccttatgc gccctggttt gaggttgccg atccggcggt ggttgggaag
     1141 cgcgtcgagt tagtcaataa caaacctacc tatctcgccg tcatcgctca gaagatccag
     1201 gctgtttcta tctttcaagc aagcatttac caaagcgatt atgtcaagac ctgggatcaa
     1261 gctaataaac ttatagccag gctcacgcca cttagcccgt ttgccccaca ttggatgcgg
     1321 agcctctatc aaaccttaag cagccgagga gcgttcagcc gttttaagcc aagcttcttt
     1381 cgtaagctta aagtgttaga gaacagcaaa ttttaacaat aaacagggag atgcttcatg
     1441 tcagtagtag ctctagtgtt cgccctcgcc tgtgggctag gggcgatcgt ttacggaggt
     1501 aaatcggtcc gctgggtatt ggcgcagcct gaagggagcg aacgcatgcg agagatcgcc
     1561 gcggcagtgc agcaaggcgc ttcggcctac ctcaaccgcc agtacaccac gatcggcata
     1621 gtgggcgccg tcctgtttgt ggtcatgggt ctcgcgctta attggaagac cgccttcgga
     1681 ttcctcgttg gggcggtgtt ctcaggtgca gccggttata ttggcatgaa catctcggtg
     1741 cgggcaaatg tgcgtacggc ggaagcggct aaaggcgggc tcaacgccgc gctcaccgtc
     1801 gctttccgcg gtggcgcgat caccgggctt ttggtggtcg ggctcgggct tttgggtgtg
     1861 gctggctact atgcgattct atcgatgctg acacctgcag gtgaagcggt cgatctcgcg
     1921 ccgcttgtcg gtcttggctt cggcggatcg ctcatctcta tctttgcgcg attgggtggc
     1981 ggtatcttca ccaagggggc ggatgtgggc gccgatctgg tcggcaaggt cgaggccggg
     2041 atccccgagg atgatccccg taaccccgcc gtcattgccg ataacgtcgg cgataacgtc
     2101 ggcgattgcg ccgggatggc ggccgatctg ttcgagacct atgcggtcac tgtcatcgct
     2161 acgatgctgc ttgggagcct cctgctgaag gggggcggcg ccaatgtggt ggtttatccc
     2221 ctggcgctcg gaggtgtctc tatcatcgcc tcgatgatcg gcggtaatta cgtcaaagcc
     2281 accgagggtg gcaagatcat gaatgcctta tataaaggct tgattgtcgc tggaggcatc
     2341 tccgcagtgg cctttttgcc ggtcactgcg ctcctcatgt ggaatgtgga aggctatggc
     2401 gtagtgtcac tctatg
//
LOCUS       DASQSL010002196         1337 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_204983, whole genome shotgun sequence.
ACCESSION   DASQSL010002196 DASQSL010000000
VERSION     DASQSL010002196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1337)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1337)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1337
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204983"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(270..1031)
                     /locus_tag="VE844_22060"
     CDS             complement(270..1031)
                     /locus_tag="VE844_22060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018988757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HZC03926.1"
                     /translation="MGTNLATNPGDPTGQYPVELLAIADKLSDALDALSFGPPVAYVY
                     NPLTYARASYALYAEHYGAPPKELVLLGMNPGPFGMAQTGVPFGEVKSVRDWLKIEAS
                     VAKPAREHPKRLVEGFACRRSEVSGRRLWGWAQTVCKAPERFFAQFFVANYCPLLFLD
                     ESGRNLTPDKLLIDERRLLLEHCDEALRETVRYLQPRYVLGVGRFAEQRAREALTGFN
                     TRIGSIPHPSPANPSANRGWDDQMNQALAALRIDP"
BASE COUNT          301 a          363 c          385 g          288 t
ORIGIN      
        1 ctcgaataga tagggtcgtt ttttcagcca ttcttattaa cctcccctta tagcgcgttg
       61 cgataaggac ttcacttgga cgcgactacg gcgatacgcg acagctatac gcgccgttcg
      121 caaggacggg tgatgattat ctcacctccc taaatctacc actagacaaa tgaataagat
      181 atagaaaaat tactctctcc ttttttagaa tcttcaggtg atccctattt taacgtattt
      241 gctcaggctt ggtagggggt acgtttgcgt taagggtcga ttcgaagtgc ggcgagcgcc
      301 tgattcatct ggtcgtccca gccacgattg gccgagggat tggcaggact cgggtggggg
      361 atcgagccaa tgcgggtatt gaaaccagtg agtgcttcac gggcacgttg ctcggcaaag
      421 cggccgaccc cgagcacgta gcgcggctgc agataccgca ctgtctcgcg cagcgcctca
      481 tcgcagtgct caagaagcag ccgacgctca tcgataagca acttgtcggg tgtcaggttg
      541 cggccgcttt catcgagaaa taagagtgga cagtaattgg ccacaaagaa ctgcgcgaag
      601 aagcgctccg gggccttgca caccgtctgc gcccaccccc atagccgtcg cccgctcacc
      661 tcactgcggc ggcacgcaaa gccctcgacc agtcgtttgg ggtgctcgcg cgcaggtttt
      721 gccaccgaag cctcgatttt aagccagtcg cgcacgctct ttacttcgcc gaaggggacc
      781 ccggtctgcg ccataccgaa cggtccagga ttcataccca gtagcaccaa ctccttaggc
      841 ggggccccat aatgctcagc gtaaagtgcg taggaggcac gggcataggt gagcggattg
      901 tagacgtagg ccacgggagg gccgaaggaa agcgcgtcaa gcgcatctga cagtttgtct
      961 gcgatcgcga gaagctccac gggatattgg cccgtcggat cccccggatt ggtggcgaga
     1021 ttcgtaccca tacgatcggc tattttcagg gatctctcaa ctttttcaat ggcggacggc
     1081 aactctcatc gagccgaatc ttcggctaaa gatgatgtgg atgaagctgc cgctgtggtc
     1141 aaggttcgtg ccattcgcca caagccgccg cacaagacga cggaggaaat actgtgaagg
     1201 tgatcaatat tggacagacg acgttggagg ggtgtgttac cgatgctcaa cacgagcgga
     1261 tcgtcctcac gcgtgagggc aagcccattg cgctcattgt cggtgtggca ggtatggatg
     1321 aggaacaact ccaacta
//
LOCUS       DASQSL010002197         1033 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_123102, whole genome shotgun sequence.
ACCESSION   DASQSL010002197 DASQSL010000000
VERSION     DASQSL010002197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123102"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..266
                     /locus_tag="VE844_22065"
     CDS             <1..266
                     /locus_tag="VE844_22065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003046572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HZC03927.1"
                     /translation="AYVNGGIQACINAFGSRLQHIHLHDNHGAKDEHLEVGTGAIPFA
                     SLANFLRTFRDVISLETRSSTDPEGGVLRSRADIERLWQTVAQ"
     gene            343..>1033
                     /locus_tag="VE844_22070"
     CDS             343..>1033
                     /locus_tag="VE844_22070"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HZC03928.1"
                     /translation="MPRKVLIVLIDGGDPQYFDHTEVPNLRRIGARGFWVNGTCVMPS
                     VTNVNNASVMTASFPREHGITGNFCYDPATGDGTYMESADFLARETLFQRAKRLGMST
                     ALFTSKVKLKRLLERSTDIAVAGEDPPAELIEKVGPKREIYSLEINLWVLEAARVIMR
                     EQSPDLVYVSTTDYIMHKYPPEHEMAQRHLREIDRIIGHIADEQPDREIYVTADHGMS
                     AKHRAINLRMKL"
BASE COUNT          231 a          287 c          294 g          221 t
ORIGIN      
        1 atgcttatgt caacggcggc atccaagcct gcatcaacgc tttcggctcg cgcctgcaac
       61 atatccactt gcacgacaac catggcgcca aggacgagca tctcgaagtc ggcacaggag
      121 ccattccatt cgcatcgtta gcgaattttc tacggacctt tcgtgacgtg atctctctgg
      181 agacacgcag ctcgacagat ccggaggggg gagtgctgcg gagtcgtgcc gatatcgaga
      241 ggctctggca gactgtggcg cagtaagcaa gcaaccgtac cgttttggat cattggccgg
      301 ttgcgatgct gggagagtcg atgccatgga ggcttgcaga atatgccacg caaagtccta
      361 atcgttctca ttgatggtgg tgatccgcaa tatttcgacc acaccgaggt gcccaatctc
      421 cgccgcatcg gggcccgcgg tttctgggtg aatggcacct gtgtcatgcc atccgtgacc
      481 aatgtgaata atgcttcggt catgaccgcg agtttcccgc gcgagcatgg aattacgggt
      541 aatttctgct atgacccggc cacgggcgac gggacgtaca tggaatcggc ggatttcctg
      601 gctcgggaga cgctctttca acgtgccaag cggctgggca tgagtacagc gctcttcacc
      661 tccaaggtga aactgaaacg cctgctcgaa cgcagcactg acatcgcggt agcgggcgag
      721 gatcccccgg ctgagctcat cgagaaggtt ggccccaagc gtgagatcta ttcattggag
      781 atcaacctct gggtactgga ggcggctcga gtgattatgc gcgagcaaag tcctgatttg
      841 gtctacgtct ccacgaccga ctacatcatg cataaatatc ctcccgaaca cgaaatggcg
      901 cagcggcatc tgcgtgagat cgatcgcatc atcggacaca ttgccgacga acagccggac
      961 cgtgaaattt atgtcacggc cgatcatggt atgtcagcca agcatcgcgc catcaatctc
     1021 cgcatgaagt tgg
//
LOCUS       DASQSL010002198         1009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_177235, whole genome shotgun sequence.
ACCESSION   DASQSL010002198 DASQSL010000000
VERSION     DASQSL010002198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177235"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(232..612)
                     /locus_tag="VE844_22075"
     CDS             complement(232..612)
                     /locus_tag="VE844_22075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004178163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF393 domain-containing protein"
                     /protein_id="HZC03929.1"
                     /translation="MATPLVRLRLPMLVYIFMFRKAILRACPVEACGIKDIEWVDVHT
                     NPEAVSEVGASLEQVRERLHVKDSDGQLNVGADAFTRLWSQTRGQRWLAKLLRLPVLK
                     QLTHLAYNVFARLLYRWNRAKGHW"
     gene            612..>1009
                     /locus_tag="VE844_22080"
     CDS             612..>1009
                     /locus_tag="VE844_22080"
                     /inference="COORDINATES: protein motif:HMM:NF033564.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
                     /protein_id="HZC03930.1"
                     /translation="MTATFMEHFSDLKDPRDDKNKKHQLLDILFLVIAAVISGAEGWE
                     AIETFGEEKLEWLRNYFPFANGVPSHDCIRMVLISLSPKALQGCFVRWMQAVAEVAKG
                     EVVAIDGKTIRRSYDRAEGLGPIHMVSAWA"
BASE COUNT          229 a          285 c          284 g          211 t
ORIGIN      
        1 gcctaagggc agctcgttat gagattcacc gatagagacc agatacgtca catcggcaca
       61 accctgaggg gagcttagga tgtcaccagc ctctgcccga ctgacgattt cgatatagat
      121 ctcgcgcatg tccgccttca ccgctgctta catctgagcc gccgaacgac ctagctcacc
      181 ggcgcggcgc tgtttgccgc gtccgtgtgg agcgccgtat tagcggtgat attaccagtg
      241 ccccttggcg cggttccagc ggtaaaggag gcgagcaaag acattgtacg ccaagtgcgt
      301 aagttgcttg agcacgggta accgcaacag tttcgcaagc cagcgctggc cgcgcgtttg
      361 tgaccatagg cgcgtgaatg cgtccgctcc aacattgagc tgaccatccg agtctttgac
      421 gtgcaaccgc tcccgcacct gctctaacga agcaccaacc tccgacaccg cctctggatt
      481 agtgtgcaca tcgacccact cgatatcctt aatgccacat gcctccacag ggcaagcgcg
      541 taatatagct ttacgaaaca taaagatata gacgagcatt ggcagcctaa gcctaaccag
      601 aggagttgcc aatgactgcc acctttatgg aacatttttc tgatctgaaa gacccgcgcg
      661 acgacaagaa caagaaacac caactgctgg acatcctgtt tctggtgatt gcagctgtca
      721 tcagtggagc ggagggctgg gaggccattg aaacctttgg ggaagagaag cttgagtggc
      781 tgcggaacta cttccccttt gccaacggcg taccctcgca tgactgtatc cggatggtcc
      841 taatcagtct ctcacccaag gccctgcaag ggtgttttgt gcggtggatg caggccgtgg
      901 ccgaggtggc caagggcgag gtagtggcca ttgacggtaa gacgatccgg cggtcctatg
      961 accgcgcgga gggtttaggg ccgatccaca tggtcagtgc ttgggccaa
//
LOCUS       DASQSL010002199         1407 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_123145, whole genome shotgun sequence.
ACCESSION   DASQSL010002199 DASQSL010000000
VERSION     DASQSL010002199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1407
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123145"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(99..767)
                     /locus_tag="VE844_22085"
     CDS             complement(99..767)
                     /locus_tag="VE844_22085"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC03931.1"
                     /translation="MIPPDADAEFAASMEEVLEVYARPYNPRYPVLCMDEQPIQLLQE
                     TRTPISGTLKHPRRVDYEYERAGTASIFMFCEPLAGWRHVSVRERRTKVDWAQEMAHF
                     LRTRYPSAQKVILVCDNLNTHTKGAFYETFEPATARSLVQRVEFCHTPKHGSWLNIAE
                     NELSAMTRQCVTGRRFAAVEELRAQTTAWHEHSNARQRTVDWQFRIDDARVKLKSIYP
                     KLEV"
     gene            complement(764..>1407)
                     /locus_tag="VE844_22090"
     CDS             complement(764..>1407)
                     /locus_tag="VE844_22090"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC03932.1"
                     /translation="NQAGPVVSFPSVVSPVVVDRFNDERLRRKEQALCAAYLSLKNRE
                     LQLDNVRPAKEGWAMQKKYVVRLTDIEREILNSLVKKQRVSAQKVLRARVLLKTDADG
                     PNWTDAATANAFDCRTKTIENIRERFVTEGFEITLNGQPKRRVRGKILNGDQEAKIIA
                     LRLGPPPPGFANWTLRLLAEHAVTLDIVETVSHETLRRTLKKITSRQGRSPIG"
BASE COUNT          281 a          401 c          377 g          348 t
ORIGIN      
        1 gcaacttcac aggagtttgt ttgcaatgct tcgcccctga tgagcatctt aaacaggcga
       61 ttgcaaaaaa ggtcgtgtga acctgcacta gtgctttgtc acacttctaa tttagggtag
      121 attgacttca gtttcacccg cgcatcatcg atcctaaact gccaatcgac ggttcgctgc
      181 cgggcattac tgtgctcatg ccaagcggtc gtttgtgcgc ggagttcctc gaccgctgca
      241 aaacgacgac cagtaacaca ttgccgcgtc atcgcactca gttcgttttc ggcaatgttt
      301 aaccaactgc cgtgcttggg ggtgtgacaa aattccaccc gctgtaccaa cgaccgcgcc
      361 gtcgccggct caaatgtctc gtagaaggcg cctttggtgt gcgtattcag attgtcacag
      421 accaagatca ccttctgcgc cgatgggtag cgcgtgcgca ggaagtgcgc catttcttgg
      481 gcccagtcca ccttggtacg tcgttcgcgc actgagacgt gccgccagcc cgcaagcggt
      541 tcgcagaaca taaaaatgct ggcggtgccc gcccgctcgt actcatagtc tacgcgacgc
      601 ggatgcttga gcgtcccgga gatcggtgtg cgcgtttcct gcagtaactg gattggctgc
      661 tcatccatac agagcacggg ataccgagga ttgtagggcc gggcgtagac ttcgagcact
      721 tcctccatgc ttgcggcgaa ttcggcatcg gcgtccggcg gaatcaccca ataggcgatc
      781 ttccttgtcg tgaagtgatt ttttttagtg tcctacgcag cgtctcgtgg cttaccgtct
      841 ccacaatgtc caaggtgacg gcgtgttccg ccagcaggcg tagggtccag ttggcgaatc
      901 ctggcggcgg tggtcccagc cgcaaggcaa tgatcttggc ttcttgatcg ccgttaagga
      961 tcttgccacg cacgcgacgc ttcggctggc cgttgagtgt gatctcaaac ccttcagtca
     1021 caaaacgctc ccgaatgttt tcgatggttt tcgtgcgaca gtcgaatgcg ttcgcggtcg
     1081 ccgcatcggt ccagttaggt ccatccgcat cggtcttgag cagaacgcgg gcgcgaagca
     1141 ccttctgggc cgatacccgt tgcttcttga ccagactgtt caaaatttct cgctcaatat
     1201 ccgttagccg aacaacatac tttttttgca tcgcccaacc ctccttcgct gggcgtacat
     1261 tgtctaactg tagttcccgg tttttgagag ataaataagc ggcgcagaga gcttgctctt
     1321 tgcgccgcag tcgttcatcg ttgaagcggt caaccacaac gggagaaacg actgatggaa
     1381 agcttaccac cggccctgct tgatttc
//
LOCUS       DASQSL010002200         1135 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_205083, whole genome shotgun sequence.
ACCESSION   DASQSL010002200 DASQSL010000000
VERSION     DASQSL010002200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1135
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205083"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            242..>1135
                     /locus_tag="VE844_22095"
     CDS             242..>1135
                     /locus_tag="VE844_22095"
                     /inference="COORDINATES: protein motif:HMM:NF013106.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HZC03933.1"
                     /translation="MPSRHGTRLTQRKTSFLRRWLRGLLATVAFASVFLLAAASTGAY
                     LLYQHFTEVLPDINQLKSYQPSLITTVYADDETPVTQFFVERRVLIPLDKIPAVLKEA
                     TLAVEDARFYTHEGVDFIGIARAAWSNIQAGEVVEGASTITQQVAKMLFLTHRKTLER
                     KVREVILASRMEHLLTKDEILEIYLNQTYYGHGAYGVEAAANVYFGKHVGDLTLDEAT
                     LIAGLPKAPTAYSPYNTPERALRRRAHVLRRMVETGTITPEEEQQAQAAPLRLRPRQE
                     TTVRAPYFIEHVRRYLEEQYGS"
BASE COUNT          266 a          350 c          307 g          212 t
ORIGIN      
        1 cctgatgtag ccgccattgc agactaccga ccatccatag cctgatcact actgtagcag
       61 aaacaggcac tgactgatag tgtctatcgg ctcttcaccc atctgtctac ggctcaaagg
      121 caccttgaca taggccaaaa agcctcctta tacttgataa gcccgtgaaa gacccctgaa
      181 acacttgctc aatagggctc ttagcagggg ttcatgcgga tgggtcaaag gagaagggac
      241 tgtgccctcc cgacacggca ccaggctgac gcagcgaaaa acatcgtttc tccggcgctg
      301 gctccgaggt ctcctcgcaa ccgtggcctt tgccagcgtg ttcttgctcg cagcggccag
      361 caccggtgcc tatttactct atcaacactt caccgaggtg ctgccggaca tcaaccagct
      421 gaagtcctac cagccgagcc tgattaccac ggtgtacgcc gatgatgaga cccccgtaac
      481 ccagtttttc gtcgaaagac gcgtcctgat tcccctagat aaaatccccg ccgtgctcaa
      541 agaggccacg ctggccgttg aggacgcgcg attttacacg catgaggggg tcgactttat
      601 cggcatcgca cgggcggcat ggtcgaacat tcaagccggc gaggtggtgg aaggagccag
      661 caccatcact caacaagtgg caaagatgct gtttttgacc caccgcaaga ccctcgaacg
      721 caaggtccgt gaggtcattt tggccagcag gatggagcat ctgctcacca aggacgagat
      781 tctcgagatc tacctcaatc aaacctacta tggacatggg gcctacggcg ttgaggcggc
      841 ggcaaacgtg tacttcggca agcacgtcgg cgaccttacg ctcgacgaag cgacgctcat
      901 cgccggcctg ccgaaagctc ccacggcgta ttcgccctac aacacgcctg agcgcgccct
      961 gaggcggcgc gcgcatgtct tacgccgcat ggtcgagacc gggaccatta ccccagagga
     1021 agagcagcag gcacaagcgg caccgcttcg gctccgaccg cggcaagaaa cgaccgtgag
     1081 agcaccgtac ttcatcgagc acgtacgacg ttatctggaa gagcagtatg gcagc
//
LOCUS       DASQSL010002201         1391 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_205091, whole genome shotgun sequence.
ACCESSION   DASQSL010002201 DASQSL010000000
VERSION     DASQSL010002201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1391
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205091"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            14..>1391
                     /locus_tag="VE844_22100"
     CDS             14..>1391
                     /locus_tag="VE844_22100"
                     /inference="COORDINATES: protein motif:HMM:NF033592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC03934.1"
                     /translation="MLVPVVGVVQQHLKSWALGPVLQCLERFLEETAFRSTLIKKPNA
                     FTRPQGLYSLPVTLKTFLIQCLAQDHSCRTAVATAKDHGWLPPSASPDTAAYCRARDA
                     LAGGGLQKAVEHTAQALDAGGSDEHLWMGRQVHVALGTGIALPDTEANQDDYRQPAQQ
                     KLGCGFPVLRLVAFMSLATGAVSRYSLGNLHDHEQRLFQELRTHLKANDIVLGDRNFG
                     TFANLVLLKRQGADGVFRRHQSRGAGVDTVKRLGQDDSLVRWRAPHPYRPPWLDASVD
                     LPETMVVREVSFQVTQPGLRTQSVTLVTTLLDAKTYPAWALAELYLKRWCMELWLRDI
                     KITMDMEMLRTKTPARVRAELAMFLVGYNLIRTVMLDASKVSQARLERLSFKSALMRF
                     GLWCARLGHGIQLVAWLRGYSGMLSDLSRDLNPNRPGRYEPRVVKRRPKKFPRMQQPR
                     QVLREKALT"
BASE COUNT          260 a          425 c          397 g          309 t
ORIGIN      
        1 ttggagatgt cttatgttag ttcctgtcgt cggtgtcgtc cagcagcacc tcaaatcgtg
       61 ggccctgggg cccgtcctcc agtgcctcga gcgattccta gaggagactg cctttcgcag
      121 cactttgatc aagaagccca acgcctttac ccgcccccaa ggtctctact cgctgcccgt
      181 cacgctcaag acgtttctca ttcagtgcct cgctcaggat cattcgtgtc gcactgccgt
      241 ggccaccgcc aaagaccatg gttggctgcc accgagcgcc tcgcccgaca ccgctgcata
      301 ctgtcgagcc cgtgatgcgc tggccggcgg ggggctccag aaagccgttg agcacaccgc
      361 ccaagccctc gacgcgggtg gctcagatga gcatctctgg atgggacgac aggtccatgt
      421 cgccctcggc actggcattg ccctgcccga taccgaggcc aatcaagacg actatcgtca
      481 gcctgcacag cagaagctcg gctgtggctt tcccgttttg cgtctcgtcg ccttcatgtc
      541 tttggccacc ggcgcggtga gccgctatag tctcggcaac ctccatgatc atgaacagcg
      601 tctcttccaa gagctacgca ctcacctgaa ggcgaatgat attgtgcttg gcgaccgtaa
      661 cttcggcacc tttgccaacc tcgtcttgct caagcgtcaa ggtgccgatg gcgtctttcg
      721 tcgacatcag tcccgcggag ctggggtgga cactgtcaaa cgtctgggtc aagatgattc
      781 cctcgtgcgc tggcgcgctc cccaccctta tcgcccccca tggctcgatg catcggtgga
      841 cttacccgag acgatggtgg tgcgtgaagt cagctttcag gtgactcaac ccggcttgcg
      901 cacccaatcg gtaacgctcg tgaccaccct gttggatgcc aagacctatc cggcttgggc
      961 attggctgag ctttacttaa aaagatggtg tatggaactg tggctgcggg acatcaagat
     1021 cacgatggac atggagatgc ttcgcaccaa aacccccgct cgtgtacggg cggaattggc
     1081 gatgtttctg gtgggttaca atctcattcg gacggtgatg ctcgatgcct ccaaggtgag
     1141 ccaagcacgg cttgagcggt tgagttttaa atcggcgttg atgcgctttg ggctatggtg
     1201 cgctcgtctc gggcatggca tccaactggt ggcgtggctg cggggatact cagggatgtt
     1261 gagcgatttg tcccgcgatc tcaaccccaa tcgtccaggg cgctatgagc cacgggtggt
     1321 caaacgccgg cccaagaagt ttccccgcat gcagcagcca cgacaggtct tgcgagaaaa
     1381 ggcactcact g
//
LOCUS       DASQSL010002202         1237 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_123202, whole genome shotgun sequence.
ACCESSION   DASQSL010002202 DASQSL010000000
VERSION     DASQSL010002202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1237
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123202"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1237)
                     /locus_tag="VE844_22105"
     CDS             complement(<1..>1237)
                     /locus_tag="VE844_22105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HZC03935.1"
                     /translation="YADYALLTPPFTLPWGEYVAWFSTWVGLAGPVLAGIFLMLLFPN
                     GRLLSRRWRTVAWVAVFGAALTALGDAFTPDRLRTHSFVENPFGVVGVIGGRFPAYLV
                     FSASTVGTTLLLLSTLAALFSLILRLHRVRGDERQQLKWLLYAAVPATVCVSVALIDV
                     ILHHLNTYFLIFKNSPYWTGIWSWEFLIFISYLGVYAALAVPVFTYIAILRYRLFDID
                     IIINRTLVYGALSACVVGIYVLAVVALGALFQAQGNLAISIAATGLVATLFQPLRDRL
                     QRGVNRLMYGERDDPYAVISRLGRRLEAALAPDTVLPTIAETIAQALKLPYAAILLKE
                     GEGFRTAAVYGSPRGEPETLPLVYQREEIGRLVLSPRAPGEAFSAADRSLLEDLARQA
                     EVAVHAVRLTTDLQHSRERL"
BASE COUNT          289 a          356 c          376 g          216 t
ORIGIN      
        1 cagccgctca cgtgagtgct gcaggtcagt ggtgagcctc acggcatgaa cggcaacctc
       61 agcttgtcga gcgaggtctt caagcaagct gcggtcggct gctgagaagg cttcccccgg
      121 ggccctggga gagagtacca gacgtcctat ctcttctctt tggtagacca gcggaagcgt
      181 ttccggctca cctctaggtg agccgtagac cgcagcggtc ctgaacccct cgccctcttt
      241 aaggaggata gccgcgtagg gtagcttcag cgcctgggcg atcgtctcgg cgatcgtggg
      301 cagcactgta tcgggtgcaa gggctgcttc gaggcgtctc ccaaggcgcg agatcacggc
      361 gtaaggatca tctcgctcac cgtacataag acgattgacg ccgcgctgga gcctgtcccg
      421 tagcggctgg aatagggtgg ccacgagccc cgtggccgcg atcgatatgg ctaggttgcc
      481 ctgggcctgg aacagggcac ccaaggctac caccgcgaga acatagatcc cgacgacgca
      541 ggcgctaaga gcgccgtaga cgagggtgcg gttgatgatt atgtctatgt cgaagaggcg
      601 gtacctgagg atagcgatgt aagtgaaaac tgggacggcg agcgcagcgt atactcccaa
      661 ataactgata aaaattagaa attcccatga ccatataccc gtccagtacg gtgagttctt
      721 gaagatgagg aagtacgtat ttaagtggtg gagtatcaca tcaatcaagg ccacgcttac
      781 gcacacagtt gctggcactg cggcgtacaa caaccatttg agctgctggc gttcatctcc
      841 ccgcacacgg tgcagtcgaa ggatgagcga gaagagcgca gcgagagtgc tcaataagag
      901 cagcgtcgta ccgacggttg aggctgaaaa gaccaggtac gcagggaatc tgccaccgat
      961 gactcctaca actccaaacg ggttctcaac gaaactgtgg gtacgtaacc ggtccggcgt
     1021 aaacgcgtcc ccgagtgcgg tcagcgcggc tccaaagacc gccacccatg ccacggtccg
     1081 ccagcggcga gacagtagcc ggccattggg gaacaacagc atcaggaata tccccgccag
     1141 gaccggcccg gctaacccga cccacgtcga gaaccaggct acgtactccc cccagggcaa
     1201 cgtgaaaggc ggcgtcaaca gcgcgtagtc agcgtac
//
LOCUS       DASQSL010002203         1145 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_205119, whole genome shotgun sequence.
ACCESSION   DASQSL010002203 DASQSL010000000
VERSION     DASQSL010002203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1145
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205119"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1145)
                     /gene="nuoD"
                     /locus_tag="VE844_22110"
     CDS             complement(<1..>1145)
                     /gene="nuoD"
                     /locus_tag="VE844_22110"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007415272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HZC03936.1"
                     /translation="TAGGLRRMVINMGPQHPSTHGVLRLLLELDGEKVVKCTPHLGYL
                     HSGKEKIAEVKSYHQFIPYTDRLDYLAPMSNNVAYAQTVEKLLEIDIPPRAKYIRVLV
                     AELARISSHLLAIGTMAMDVGAYTMFFHTFREREELYNLFEMVCGTRLTTSYTRIGGV
                     DQDLPAGFVERCRAFIDSFPEKIEEYDKLLTRNRIWIDRTRGVGVISAEDAIDLGFTG
                     PNLRASGVGLDLRRAEPYLIYDELDFEVPTGTASDCYERYLIRMAEMRESTKIVRQVL
                     DRMPAGEIQLRDPRVMLPAKAQVLTKMEELIHHFILVIEGMRPPPGEVYSAVEGPKGE
                     LGFYLVSDGGKTAYRLKVRSPSFIALQALPKLVEGRFLSDVVAIVGS"
BASE COUNT          268 a          354 c          287 g          236 t
ORIGIN      
        1 actgccaaca atcgccacaa catccgacag gaagcgccct tcaacaagct tcggcagggc
       61 ttgcaaggca atgaaggagg gcgaccgcac ttttaatcgg taggcagtct tgccaccatc
      121 gctcaccaag taaaagccca actcaccttt cggcccctca acagcactgt agacttctcc
      181 gggcggcggc cgcatcccct cgatgaccaa aatgaagtga tggatcaact cctccatctt
      241 cgtcaacact tgcgctttag ccggcagcat cacacgtggg tcacgtaatt ggatctcacc
      301 tgccggcatc cggtcgagca cttgacgcac aatcttcgta ctctcacgca tctctgccat
      361 gcgaattaaa tagcgttcat agcaatcact ggccgtcccg gtgggcactt cgaaatcgag
      421 ctcgtcatag atcaagtacg gctccgcccg acggaggtcg agccccacgc cagaagctcg
      481 caggttcggt cccgtgaacc ctagatcaat ggcatcctcg gcggaaatca cccccacccc
      541 tctggtacga tcgatccaga tacggttacg tgtcagtagc ttatcatact cctcgatctt
      601 ctctgggaag ctgtcgataa aggcccggca gcgctccaca aatcccgcag gcaaatcctg
      661 atccacccca ccaatgcggg tgtagctggt ggtcaaacgt gtcccacaca ccatctcaaa
      721 gagattatag agttcctcac gctcgcgaaa cgtgtggaag aacattgtgt aggccccgac
      781 atccatcgcc atggtgccga tggccaaaag gtgcgatgag atacgcgcca actcagcgac
      841 gagaacacgg atgtatttgg cacggggtgg aatgtcgatc tccaatagct tctcgaccgt
      901 ctgcgcatag gccacattgt tcgacatggg cgccaggtag tccagtcggt cagtataggg
      961 aataaactga tgatacgatt tcacctccgc gatcttctct ttgccgctat ggagatagcc
     1021 gagatgcggg gtgcatttga ccaccttctc cccatccagc tctaagagca ggcgcaacac
     1081 gccgtgggta ctggggtgct gaggtcccat gttgatcacc atgcggcgga gcccacccgc
     1141 cgttg
//
LOCUS       DASQSL010002204         1588 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_123230, whole genome shotgun sequence.
ACCESSION   DASQSL010002204 DASQSL010000000
VERSION     DASQSL010002204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1588
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123230"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1301)
                     /locus_tag="VE844_22115"
     CDS             complement(<1..1301)
                     /locus_tag="VE844_22115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015759182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004819 - glutamine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006425 - glutaminyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase/YqeY domain fusion
                     protein"
                     /protein_id="HZC03937.1"
                     /translation="MTTPDMTSPSHFIREIIAEDVQRGKYGGRVHTRFPPEPNGYLHI
                     GHAKSICLNFGIAAEFGGLCNLRFDDTNPTKEDVEYVESIKADVRWLGFDWDDRLFYA
                     SDYFEQLYQYAVQLIKAGKAYIDSLSTEEIRATRGTATGAGRESPYRTRSVEENLDLF
                     ARMRAGEFEEGAHVLRAKIDMASPNVLMRDPVMYRILHASHHRTGDTWCIYPLYDYAH
                     CVSDSLEGITHSLCTLEFEDHRPLYDWFLEALGIYHPQQIEFARLNMSYTVLSKRKLL
                     TLVERGHVTGWDDPRMPTISGLRRLGYTPEAIRTFCERIGVAKRNSVVDVALLEHCLR
                     EDLNRRAPRVMAVLRPLRVVIVNYPEDRVEELAAVNNPEDPGMGTRKVPFSRVLYIER
                     DDFREDPPKQFFRLAPGREVRLRYAYFITCVEVVKDERTGEV"
BASE COUNT          343 a          472 c          459 g          314 t
ORIGIN      
        1 acctcaccgg tccgctcgtc cttcaccact tctacgcagg tgataaagta ggcgtagcgc
       61 agccgcacct cacgcccagg cgccagacgg aagaactgct tcggggggtc ctcacggaaa
      121 tcatcgcgtt cgatgtacag cacacgggag aagggcacct tgcgcgtgcc catgccgggg
      181 tcctccgggt tgttcacggc cgctaactct tccacccggt cttccgggta gttgacgatg
      241 accacccgga gcggccgcaa caccgccatc actcgtggcg cacgtcgatt caagtcctca
      301 cggagacagt gctccagcaa ggcgacgtcg acgacgctgt tgcgcttggc gacgccaata
      361 cgctcacaaa aggtcctgat ggcttcaggg gtgtaaccca gacgccgcaa cccagagatg
      421 gttggcatgc gcggatcgtc ccagcccgtg acgtgccccc gttccaccaa cgtcaggagc
      481 ttgcgcttgc tcaagacggt gtagctcatg ttgaggcgcg cgaactcgat ttgctgcggg
      541 tggtagatgc ctaacgcctc caggaaccag tcgtacaacg ggcgatggtc ttcaaattcc
      601 agcgtgcaca aggaatgcgt gatgccttcc agcgaatccg aaacgcaatg ggcatagtcg
      661 tacagcggat aaatgcacca cgtatcgccc gtgcggtgat gagacgcgtg cagaatgcgg
      721 tacatgacgg gatcacgcat gagcacgttg ggagaggcca tatcgatttt agcccggagg
      781 acgtgggcac cttcctcgaa ttcaccggcc cgcatgcgcg cgaacaggtc gaggttttcc
      841 tccactgagc gggtgcgata agggctctcc cgccccgccc ccgtcgccgt gccacgggtg
      901 gcgcggattt cctccgtgct caagctgtca atatacgcct tgccggcctt gatgagctgc
      961 acggcgtact ggtagagttg ctcaaagtag tccgaggcat aaaacagtcg gtcatcccaa
     1021 tcgaagccga gccagcggac gtccgccttg attgattcga cgtactccac atcctccttg
     1081 gtagggttgg tgtcatcaaa acgcaaattg cacagcccgc cgaattcggc ggcgatgccg
     1141 aagttgaggc agatggactt ggcatggccg atatgcagat agccattcgg ctccggcgga
     1201 aagcgcgtat ggacgcggcc accgtatttc ccgcgctgca cgtcttcggc aatgatctcc
     1261 cggataaaat gggaagggct cgtcatatca ggggttgtca taaatgcagc tccctttctg
     1321 cttttcgtcc tatactcaaa agccatacgg catttgctgg tcgttgtagg atcattgtaa
     1381 caaaggcttc tccaaaaatc gtctgggaga aggtgacgaa gctctgcgag ctagaccagg
     1441 gataagggcc aggcaatgcg acggctgaat atcattcgcc agcccccaat tcctccgcca
     1501 ggataggtac atcgcggacg gcacggccga agcgaatatg gtccacgaag gaaaccacca
     1561 gccattgcgg tctcatcttt agcggcta
//
LOCUS       DASQSL010002205         1069 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_205131, whole genome shotgun sequence.
ACCESSION   DASQSL010002205 DASQSL010000000
VERSION     DASQSL010002205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205131"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..927)
                     /locus_tag="VE844_22120"
     CDS             complement(<1..927)
                     /locus_tag="VE844_22120"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HZC03938.1"
                     /translation="MAVATAFSLVVSTALCTVTMLLFLAFWVASGHYREKLSQIQARP
                     LALCSLALLTMLVIGVLYSAATLPQALNTLRSYRELLYLPLLLTAFDDQKWQRRGYYA
                     FLIAMLLILTLSYAKFLGWLPLGPPGQEYTVFKGRIAHSLLMAYTIYLLAQHFVQEPH
                     RRWLWGLLIALGLVNLLFMISGRTGYLVFFALTILFMYQHWHWRGLLLSGLLVVGVAM
                     LAYHTSDAFRGRMGQMISDITEDQPPGTVTPGRVRLEFYANTLSLIARHPWLGGGTGS
                     FVPEYAELVQEKQLYPTNNPHNEFLLITTQIGL"
BASE COUNT          279 a          275 c          314 g          201 t
ORIGIN      
        1 caaaccgatc tgggtggtga tgagcaggaa ttcattatga ggattgttgg tcggatatag
       61 ctgtttctct tgtacaagct cggcatattc cgggacaaag cttcccgtgc cgccacccaa
      121 ccagggatgg cgggcaataa ggctcagcgt gttggcgtag aattccagcc gcacacgccc
      181 aggggttacc gtgcctggcg gctgatcctc ggtgatatcg cttatcatct gtcccatacg
      241 cccccggaag gcgtcagagg tatggtaagc aagcatagct accccaacca cgagcaagcc
      301 ggagagcaaa agcccgcgcc agtgccaatg ttgatacata aagagtatgg tcaaggcaaa
      361 gaacacaaga tatccggtac ggccgctgat catgaacagc agattgacta ggcccagggc
      421 aatcaagagt ccccatagcc agcgtcggtg aggctcctgt acaaaatgtt gggccaatag
      481 gtagatcgta taagccatca ggagactgtg ggcgatgcgt cccttgaaca cggtatattc
      541 ctgtcccgga ggccccaagg gcagccatcc gagaaactta gcgtacgata aggtgagtat
      601 gagcaacatg gcgatgagaa aggcataata gccgcgacgc tgccatttct gatcatcgaa
      661 ggccgtaagc aataacggta ggtagaggag ttcccggtaa gagcgtaggg tattgagagc
      721 ttgcgggagg gtggcggcgg aatacaggac gccgatcaca agcatcgtca acagggccaa
      781 tgagcaaagc gcgagcggtc tagcctggat ctgactcagc ttctcccgat aatggccgct
      841 tgcgacccaa aacgcgagga agagaagcat cgtgaccgtg caaagcgcgg tggagaccac
      901 gaggctgaag gctgtagcca ccgccatcca gcggccggcc gtgtcaaacc gatgaacgca
      961 gggtagccca agcaggagga tccatagatg tcaacctcct ggggatcagc ccagcaattc
     1021 taaatttgga ttttaccctg tattggccgg ctcaatttcg agctgctca
//
LOCUS       DASQSL010002206         1721 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_205153, whole genome shotgun sequence.
ACCESSION   DASQSL010002206 DASQSL010000000
VERSION     DASQSL010002206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1721
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205153"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            194..1453
                     /locus_tag="VE844_22125"
     CDS             194..1453
                     /locus_tag="VE844_22125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018809256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC03939.1"
                     /translation="MNVRLTDRISLGVLADVVSRDLIEDVLTETNRREQRSRLLPAHV
                     MVRFCQAMCLFFDEDYEEVMRMLAGSLRQMRSWSSSWQIPSTAAITQARRRLGADPLR
                     VLFERVAVPLAGRGTKGAWLGSRRLMAIDGFMLDVPDTEDNSEEFGRLHTSPKQSAFP
                     QVRVVGLGECGSHAIIDASFGGCRTGERSLAADLLRSYEPGMLVMADRNFYSFEFWAE
                     CLETGADLLWRVNSNVELPVLKPLTDGSYLSLVMNPALRGNRRDRLIAVARAGQDIDP
                     DDGVIVRVVEYDIPDRQGNGTGELICLITSILDPEDCPAIELAAAYHERWEFEGLIDE
                     VKTHQRGPARVLRSKSPEMVKQEIWALLLTHYGIRRLMCRAADEADVDPDRLSFIRSL
                     RVIRRQVTAQADFPPSPLPKGIQGNYH"
BASE COUNT          363 a          472 c          520 g          366 t
ORIGIN      
        1 tatacggcgc tcctagatgc tcttgagtcc cacgtccacg ggaacatagt cggtatcact
       61 tgtcttgctc gcggagccga tcagttattc gcccaagcag tgctagactc aataccacta
      121 acttaggcca aatctatgct attcttctga agtggcacga gttggtcaaa agaagcgtca
      181 tgacggtgat ccgttgaatg ttcgcctaac ggatagaatt tcgctaggcg tactggcgga
      241 cgtggtttcc cgtgatctca tcgaagacgt gctgaccgag acgaatcggc gcgagcagcg
      301 gtcacggctg ttgcccgcac atgtgatggt tcgcttctgt caggccatgt gtttgttctt
      361 tgacgaggac tacgaggagg tgatgagaat gctagccgga tcgttgaggc agatgagatc
      421 gtggtcgtcg tcatggcaga ttccctcgac cgcagcgatc acccaggctc ggcgacgact
      481 gggagccgat ccgcttcgtg tcctgtttga gcgggtagcg gttcccctcg ccggtcgtgg
      541 cacgaaagga gcgtggctgg ggtcgcgacg gctcatggcg attgacgggt tcatgctcga
      601 tgttcctgat accgaggaca acagtgagga gtttggcagg ctgcatacga gtccgaagca
      661 gagcgccttt ccgcaggtgc gggtcgtggg gttgggggaa tgtggttctc acgccatcat
      721 cgacgcctcg tttggtggat gtcgtaccgg cgagcgcagt ttggccgctg atcttcttcg
      781 gagttacgag ccgggcatgc tagtgatggc tgaccggaac ttctacagct tcgagttctg
      841 ggcggagtgc ctggagacgg gtgctgacct gctgtggcgg gtgaactcga acgtggagtt
      901 gcctgtgctc aaaccattga ccgatggatc gtatttgtcc ctggtgatga acccggcgct
      961 gcgagggaat cgcagggacc ggctgatcgc ggtggcgcgc gcgggccagg atatcgatcc
     1021 cgacgacgga gtcatcgtcc gggtcgtcga gtatgacatt cccgatcgcc agggcaacgg
     1081 gaccggtgaa ctcatctgtt tgatcacctc gattctcgac cccgaggact gcccggcgat
     1141 agagctggcc gctgcctatc acgagcggtg ggaatttgag ggcctcattg acgaggtcaa
     1201 gacacaccaa cgaggcccgg cgcgggttct ccggtcgaaa tcaccagaga tggtcaaaca
     1261 agaaatctgg gcgttgctgc tcacgcacta tgggatacgc cgactgatgt gtcgcgcggc
     1321 cgatgaagcc gacgtcgatc ccgatcgact gtcgttcatc cgttccctcc gggtcatccg
     1381 ccgccaagtt actgcgcagg cggattttcc cccctcaccg cttccgaaag gcatacaagg
     1441 aaactatcac tgagatcctg gaacgaccac tctcgaaaag acggaaccgc acaaacccac
     1501 gcgtcgtcaa acgggcacgc cacaactcgt acctagtcaa aaggccacac catcgaactg
     1561 taacccatca agggtcagcc accatcaacc tccgccggat agcctaaagt tagtggtatt
     1621 gtctcaagtg gtgatcgcga cagtgtgaga taattcctca gactgatagg cggttaccct
     1681 tgaagacaaa cacaccattg acggccgaag aacgcgaact g
//
LOCUS       DASQSL010002207         1189 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_177339, whole genome shotgun sequence.
ACCESSION   DASQSL010002207 DASQSL010000000
VERSION     DASQSL010002207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1189
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177339"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            119..>1189
                     /gene="panF"
                     /locus_tag="VE844_22130"
     CDS             119..>1189
                     /gene="panF"
                     /locus_tag="VE844_22130"
                     /inference="COORDINATES: protein motif:HMM:TIGR02119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015498 - pantothenate:sodium symporter
                     activity [Evidence IEA];
                     GO_process: GO:0015887 - pantothenate transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/pantothenate symporter"
                     /protein_id="HZC03940.1"
                     /translation="MRWDIIIPLAIYLVILFGIAIWAFNQRQAVETGGKSAEYYIAGR
                     GLGWFVLVFTILASAASAGTYIGGPGFGYEWGYGWVLAAMAQVPATLLVLGVLGKKFA
                     IVARKIEALTVTDFLRHRYESHAVVVLAAIGIVTSLMVYMSAQFVGGGRILQEVTGIP
                     YTWVVIIFAGMVAFYTSVGGFRADAISDALQGVIMLLGGVVLWIAVLSATGGMTDIAG
                     ELSQRDPELLTLPGPGNFTILLLFSFFVVFGLVPAALPHLTVRAMSYQDTASVHKAIY
                     IGPVIMAIFTLGFIGMGPVARVFYPELAVGDLALPRLIVDLMPGWVAGALFAAPMAAI
                     MSTVDSMILVVSSSIVRDLYMNY"
BASE COUNT          220 a          307 c          379 g          283 t
ORIGIN      
        1 caagatatgc cgctgagcgc aagcggcgat gattcggacg tggaggaatg agaatcgccc
       61 gagcaccggt cggaggaagc gtcgccacag ggccaactca gtagaacggg ggaaagaaat
      121 gcgctgggac atcattattc cactagccat ctacctggtt atcctctttg gtatagcgat
      181 atgggccttt aatcagcggc aggcggtcga aactggtggg aagtcggccg agtattacat
      241 cgctgggcga gggttgggct ggttcgtcct tgtcttcaca atcctggcta gcgccgccag
      301 cgccggcacg tacatcggag ggccagggtt cggatatgaa tggggatacg gatgggtcct
      361 agcggccatg gcacaggtgc cggcaacact tctggtgcta ggcgttctcg ggaagaagtt
      421 cgccattgta gcgcgcaaaa tagaggctct gaccgtgacc gactttctcc gccaccggta
      481 cgaaagtcat gcggtcgtgg tgctggctgc catagggatc gtgacctctc tcatggttta
      541 catgtcggca cagttcgtgg gtggagggcg gatcctgcaa gaggtgacag gcatccccta
      601 tacatgggtg gttatcatct ttgcggggat ggtggcgttc tatacttcgg tgggcggctt
      661 tcgagccgac gcaatcagcg acgcgctcca gggcgttatc atgctcttgg gaggtgtcgt
      721 cctttggata gcggtacttt cggcgaccgg ggggatgacc gacattgccg gcgagctgag
      781 tcagcgagat cccgagttgc tgacgctgcc cggtccagga aacttcacga ttcttctgct
      841 cttctcgttc ttcgttgtct ttggtctagt gccggcggcg ttgccccatc ttaccgtccg
      901 cgccatgagc tatcaggata cggcctctgt gcacaaggcg atctacatcg gacccgtcat
      961 catggctatc ttcacactcg ggttcattgg aatggggccg gtcgcgaggg tcttctaccc
     1021 cgagttggcg gtgggagacc ttgctctacc gagactgata gtggatctca tgcctggatg
     1081 ggtggcgggt gctctctttg ccgctcctat ggcggcaatc atgtccacgg ttgactctat
     1141 gattctggtg gtgagctcgt cgatcgtaag ggacctatac atgaactat
//
LOCUS       DASQSL010002208         1221 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_177353, whole genome shotgun sequence.
ACCESSION   DASQSL010002208 DASQSL010000000
VERSION     DASQSL010002208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1221
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177353"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..213
                     /locus_tag="VE844_22135"
     CDS             <1..213
                     /locus_tag="VE844_22135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03941.1"
                     /translation="ALRRNRTRGHCVVTGRDCAKRHDLLIDIVGMRRDARAAAFGLLF
                     ARRGTALPGAARLWAERGISRAFDGP"
     gene            293..>1221
                     /locus_tag="VE844_22140"
     rRNA            293..>1221
                     /locus_tag="VE844_22140"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          253 a          276 c          451 g          241 t
ORIGIN      
        1 gctctccggc ggaaccggac ccgagggcac tgcgtggtga cgggtcggga ttgtgccaag
       61 aggcacgatt tgctgattga cattgttggg atgagaaggg atgcgcgggc ggcggctttt
      121 gggctgttgt tcgcgcggcg aggtacggct ttacctggag ctgcgaggct ttgggcggag
      181 cgaggtatct cgcgagcgtt tgatggccct tgattgggtc tggtctctgt gcggggacca
      241 ggcctgtaac gatggtcctg ctgtctgcga ggatggcggg tctgttggga ttgaacatga
      301 gagtttgatc ctggctcaga acgaacgctg gcggcatgct taacacatgc aagtcgaacg
      361 cgtggtctcg gttcgccggg gccacgagtg gcgcacgggt gagtagcgcg tgggaacctg
      421 ccctgttgtg ggggataacc gagggaaacc tcggctaata ccgcataagc cggctggtct
      481 agagatagat tggctgggaa agatttatcg cgacaggagg ggcccgcgtc ggattagctt
      541 gttggtgggg taacggccta ccaaggcgat gatccgtagc tggtctgaga ggatgatcag
      601 ccacactggg actgagacac ggcccagact cctacgggag gcagcagtgg ggaatattgg
      661 acaatgggcg caagcctgat ccagcaatgc cgcgtgagtg aggaaggcct tagggttgta
      721 aagctctttc acccgcgacg atgatgacgg tagcgggaga agaagccccg gctaacttcg
      781 tgccagcagc cgcggtaata cgaagggggc gagcgttgtt cggatttact gggcgtaaag
      841 ggcgcgcagg cggctttgtt tgtcaggcgt gaaagccccg ggcttaacct gggaactgcg
      901 tttgatacgg cagggctaga gttcgggaga ggagagtgga attcccagtg tagaggtgaa
      961 attcgtagat attgggaaga acaccggtgg cgaaggcggc tctctggacc gagactgacg
     1021 ctgaggcgcg aaagcgtggg gagcaaacag gattagatac cctggtagtc cacgccgtaa
     1081 acgatgtgcg ctagacgtcg gggggcttag cccgtcggtg tcgcagccaa cgcattaagc
     1141 gcaccgcctg gggagtacgg ccgcaaggtt aaaactcaaa ggaattgacg ggggcccgca
     1201 caagcggtgg agcatgtggt t
//
LOCUS       DASQSL010002209         1462 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_205182, whole genome shotgun sequence.
ACCESSION   DASQSL010002209 DASQSL010000000
VERSION     DASQSL010002209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1462
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205182"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            175..1431
                     /locus_tag="VE844_22145"
     CDS             175..1431
                     /locus_tag="VE844_22145"
                     /inference="COORDINATES: protein motif:HMM:NF024821.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HZC03942.1"
                     /translation="MRRVRIKSGRIFFGLIFFLVVACPALAQEVGKIMSIVGTAEVLR
                     KEQWQSANLHEALLPGEVVRTGPGSRVAVLLADGSQIKVNANSQLLLKQVASPTRHVA
                     REMMSSLLRLFSGEIWVRSPGEPLEIETPAATATIRKTELNLTVEPKDTARLAVVEGV
                     VEFHNPEGSVMVAAKEQALAKVGEAPRKTVLLNPLDAVQWSLYYPGIVSYRDYPLTEV
                     DPALLQKRLTELERRAVTAPQDVNAIIALGEALFDLGKWMEARNQFEKALRLAPRDPR
                     AHTGLGWVYLEAGESEAALRQFHQAEPSTLMSLVGKAHALYRLNRFEEALEVIARAKQ
                     RFPMSPRPWAQAALIALVQGQVPEALAALDHALRLDPKYAPAHGLRSNTYLVRNQKER
                     ALEAAQQAVAANPLSPTAHLDLSLVK"
BASE COUNT          327 a          389 c          436 g          310 t
ORIGIN      
        1 gtcgaaaaca acctttggca ttggttccgt ttaattctaa tgaactgatt tgacttgtat
       61 tttagaggta agcgacataa gctgcttcta aagagaataa cacactcact tgctcgcatc
      121 aaaaacacgg gctcacgcac ccaatagaac aagcgtgtag gagagcgaag tttcgtgaga
      181 agggtgagga taaaaagtgg ccgaatcttt ttcgggctga tcttttttct cgtggtcgcc
      241 tgcccggcgc ttgctcagga ggtcgggaag attatgagca ttgttggaac agccgaggtg
      301 cttcgtaagg agcagtggca atctgctaac ctgcatgagg cgcttctgcc tggggaggta
      361 gtgaggacag gccccgggag ccgggtggcg gtcctgcttg ccgatgggtc gcagatcaag
      421 gtcaatgcca acagccagct tctactgaag caggtagcat cgcccacaag gcacgtagcg
      481 agggagatga tgagtagcct cctgcgtctc tttagtggcg agatctgggt ccgaagtccg
      541 ggtgaaccgc ttgagattga gaccccggcg gcgacggcga ccattcggaa aacggagctc
      601 aatctcactg ttgaacctaa ggacacggcg cgtctagcag tagtggaggg ggtggtggaa
      661 tttcacaatc cagaggggag cgtgatggtt gcggccaagg aacaagcgct cgccaaggtc
      721 ggtgaggcgc ctaggaaaac ggtgctgctc aatcccctcg atgcggtgca atggtctctc
      781 tactatccgg ggattgtaag ctatcgggat tatcccctta ccgaagttga cccagccctg
      841 cttcaaaagc gacttactga gcttgaacgc cgagcagtta cagcacccca ggatgttaat
      901 gccattatcg ctttaggcga agccctcttt gacctgggca agtggatgga ggcgcgcaat
      961 caatttgaaa aggccctgcg ccttgctccc cgagatcctc gcgcccatac gggattggga
     1021 tgggtgtatc ttgaagccgg agagagcgaa gctgcactga ggcaatttca tcaagccgag
     1081 ccatcgaccc ttatgagtct agtgggcaag gcccatgcgc tttaccgact caatcgcttc
     1141 gaggaggcct tggaggtcat cgctcgcgcc aaacagcgct tcccgatgtc tccccggccc
     1201 tgggcccaag ccgccttgat cgctcttgtt cagggccaag tgccggaggc gttggcggcg
     1261 ctcgaccatg ccctccgcct cgatcctaaa tatgccccgg ctcatggact gcgctcgaac
     1321 acctatctgg tccggaatca aaaagaacga gctttggagg cggctcagca ggcggttgcg
     1381 gccaacccgt tgtcccccac ggcccacctt gacctgagcc tggtgaaata ggccgagttc
     1441 aagctggaag aggccttgca gg
//
LOCUS       DASQSL010002210         1535 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_205204, whole genome shotgun sequence.
ACCESSION   DASQSL010002210 DASQSL010000000
VERSION     DASQSL010002210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205204"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            370..>1535
                     /locus_tag="VE844_22150"
     CDS             370..>1535
                     /locus_tag="VE844_22150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018002256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HZC03943.1"
                     /translation="MIMLLTARVFAEVAVRLQSPPVIGELLAGIVLGPSLLGWISPTE
                     VTKLLAEIGIILLLFEVGLETNVRQLARTGTKSLIVATGGFVLPFGLGYGLSRWVLEL
                     DVLPSLFVGGTLTATSIGITVRVLSDLKRQASHEGQVVLGAAVLDDVLGVVLLALLYE
                     FATGGGISLANTAKVLFFIALFFALATPAAKLLSPIIHRFDSVSEIPGLLPTTIVALV
                     LFFAWLAHAVGAPALLGGFAAGLALSRWFSLPFGLALHTEADFAHRVEGQMKPIIHLF
                     TPIFFVMIGLSLNLREIDWESPFIWVFSLSLVVVAVIGKVAGAMLIRDSWHVRLAIGM
                     AMVPRGEVGLIFAELGRVSGIFDNEIYAGMVIVIALTTLLPPFAMKWFYGQYGH"
BASE COUNT          254 a          424 c          490 g          367 t
ORIGIN      
        1 ctccttgtcc atttagaaaa ggcctatgaa gcaagatggc aggggaagtt ggctgccaac
       61 gctgctcgtg caggaatcaa ggtcatcgcg gtggtagtgg gcgagggctt caccctgggt
      121 caggcgttgg cggagaagat ctccggggaa tatcttcaga tcccaaaagc cgaggacctg
      181 gcgggcgtat tcgaacgcct aagcaatgcc ttcagccaag aagtggaggc tccggcgcca
      241 gccttagagg tgcccaccat tcaggcgcct gagagggtag agcccctccc cgcgccgccg
      301 gcggaagtag cgctgccaga ggagcgcccc gaggtggcgg aagagatcca tactttcttt
      361 ctgatcctca tgatcatgct gctgactgcg cgcgtattcg cagaggtggc agtcaggtta
      421 cagtccccac cggttattgg cgaactgctc gcgggcatcg tgcttgggcc cagcttgctc
      481 ggctggatca gcccgactga agttaccaag ctgctggcgg agatcggcat catactgctg
      541 ctatttgaag tgggcctcga gaccaacgtg cgccagcttg cacgcactgg gaccaagtcc
      601 ctgatcgttg cgacgggtgg gttcgtgcta ccgttcgggc tgggttatgg actaagccgc
      661 tgggtgctag agctggacgt gctgccctcc ctgttcgtgg ggggtacgtt gacagccacg
      721 agcatcggga tcactgtacg cgtgctctca gacctcaagc gccaggccag ccatgagggc
      781 caggtcgtgc tgggcgccgc ggtattggac gatgttttgg gggtggtgct cctggcgctg
      841 ctttatgagt ttgccactgg cgggggcatc agccttgcta ataccgccaa ggtcctcttc
      901 tttatcgcgc tatttttcgc cctggccaca ccggcggcta agctgctgtc gcctatcatc
      961 caccgctttg acagtgtgag cgagatcccg ggactcctcc cgaccaccat tgtggccctg
     1021 gtgctgttct ttgcctggct tgcgcatgcg gtgggcgcgc cggcactgct gggtgggttt
     1081 gctgcgggac tggcgctgtc acggtggttt tcgctgccct tcggccttgc gctccatacc
     1141 gaggctgact ttgctcatcg ggtagagggc cagatgaaac cgatcatcca tctgttcact
     1201 cctatctttt ttgtcatgat cgggctctca cttaatctgc gcgagattga ctgggagtcg
     1261 ccatttatct gggtgttttc gctgtctctg gtggttgtcg cggtcatcgg aaaggtagcc
     1321 ggggctatgc ttatccgcga ttcctggcat gtgcggcttg ccatcggcat ggcgatggtg
     1381 ccgcgcggcg aagtcggtct tatctttgcg gagctgggga gggtcagcgg tatctttgat
     1441 aacgagatct atgcaggcat ggtgatcgtc atcgccctca ccacgttatt gccaccattc
     1501 gctatgaagt ggttttacgg gcagtatggg cactg
//
LOCUS       DASQSL010002211         1900 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_123381, whole genome shotgun sequence.
ACCESSION   DASQSL010002211 DASQSL010000000
VERSION     DASQSL010002211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1900
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123381"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1059)
                     /locus_tag="VE844_22155"
     CDS             complement(<1..1059)
                     /locus_tag="VE844_22155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017366271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HZC03944.1"
                     /translation="MASAEFEHVDKVYPGGTQAIWDLSLKIKEGELIVFVGPSGCGKS
                     TLLRLLAGLEEITRGTLRIDETIVNTLSPQARNIAMVFQDYALYPHLSVRGNLEFPLK
                     MRKLPNEAIKKRIQWVAELLGMTDWLERLPKQLSGGQRQRVAMGRALVREPTVFLLDE
                     PLSNLDAKLRVQVRTEIGELQRRTGTTMIYVTHDQVEAMTLGDRVAVIHQGRLQQVAP
                     PRALYDRPSNVFVAGFIGNPPMNLFPTRLSTDQQGRIVMNMGDQGIPLSPAPAALARL
                     RAHQDQPLTGGIRPESIRLAAGESQRDSIQAVVEAMEYLGHETLVYLRAGQGYSIVAR
                     LPGMQAFAKEERLPLAIDS"
     gene            complement(1077..1577)
                     /locus_tag="VE844_22160"
     CDS             complement(1077..1577)
                     /locus_tag="VE844_22160"
                     /inference="COORDINATES: protein motif:HMM:NF021596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucoamylase family protein"
                     /protein_id="HZC03945.1"
                     /translation="MPTLVLDEPSYAPESLGRNDRAHAEIQRRHALEALGYPVWGLSP
                     SSTPDGNGYSEYGVKVLGSRGYGAGAVTPHAAALALSVTPLPAIANLRKLAERYEIYG
                     EYGFYDAVEPVSGEVAPKYLALDQSMLFIAVANYLKDHCIQRRFASDPIARRALPILR
                     DEDFFD"
     gene            complement(1577..>1900)
                     /locus_tag="VE844_22165"
     CDS             complement(1577..>1900)
                     /locus_tag="VE844_22165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03946.1"
                     /translation="YGFFYDTVAEHMRHGYYVNLPSASEYHYGALYAEPRIGSFIAIG
                     KGDVPAAHWFRMVRIFPPEYTWQSSGPGPMALRSFEIMSYMGAIIDGKALTISPLGVV
                     VCLRR"
BASE COUNT          419 a          572 c          545 g          364 t
ORIGIN      
        1 gctatcgatc gctaaaggta gcctctcctc ctttgcgaag gcctgcatac cgggaagccg
       61 ggccacgatt gaatatcctt gcccggcacg cagatatacc aaagtctcat ggccgagata
      121 ctccatggcc tccacaactg cctgaatcga gtccctctga gactcaccgg ccgcaagccg
      181 gatcgactcc ggccggatcc cgccggtcag cggttgatcc tgatgcgctc ggagccgagc
      241 aagcgcggcc ggggcaggtg agaggggaat gccctgatcg cccatgttca tgactatccg
      301 gccctgctga tcggtggaca agcgggttgg gaacaggttc atcggcggat tgcctatgaa
      361 ccctgcaacg aatacattgc tgggtcgatc atagagcgcc cgtggcggcg ccacttgctg
      421 caaacggccc tgatggatca cggcgacccg atcgcccaag gtcatcgcct ccacctgatc
      481 atgggtcaca tagatcatgg tggtgccggt gcgccgctgg agttccccga tctcggtccg
      541 cacctgtacg cgcaatttgg cgtccagatt ggatagaggc tcatctaaca gaaacacggt
      601 cggttccctg accagcgcac ggcccatggc cacccgctgg cgttggccgc cggaaagctg
      661 tttaggcaga cgctcgagcc agtccgtcat gccgagcagc tcggcgaccc actgtatacg
      721 tttcttgatc gcttcgtttg ggagcttgcg catcttgagc gggaattcca gattgccgcg
      781 caccgacaga tgcggataga gggcatagtc ctggaacacc atagcgatat tgcgtgcctg
      841 gggcgatagg gtattgacga tggtctcatc gatccgcagc gtcccgcgcg ttatctcttc
      901 aagacctgcc aaaaggcgaa gcagggtcga tttgccgcaa cccgaggggc cgacaaagac
      961 gatcagctcc ccctccttga tcttgagact taagtcccaa atcgcctggg tcccgccggg
     1021 ataaaccttg tctacatgct caaattcagc gctggccatg gctctcgggc accacgtcag
     1081 tcgaaaaaat cctcatcgcg gaggatcggc aaggcccggc gagcgattgg gtccgaggcg
     1141 aagcgtcgct ggatgcagtg atccttgaga taattggcga cagcgataaa cagcatggac
     1201 tgatccaggg ctaaatactt aggggccacc tcccccgaga cgggttccac ggcgtcatag
     1261 aaaccgtatt ccccatagat ctcataacgc tcggcgagct tacgcagatt agcgatggca
     1321 ggcagaggtg tgacactcaa ggccagcgct gcggcgtggg gcgtgacggc gccggcccca
     1381 tatccccgtg agcccagcac cttaaccccg tattcggaat agccattgcc atcgggtgtt
     1441 gagcttgggg aaagccccca gacggggtag ccgagtgcct ccaaggcatg acgacgctgg
     1501 atctcggcat gtgccctatc gttgcgccca aggctctctg gcgcatagct cggctcatcg
     1561 aggaccagcg taggcatcag cgcctcaaac atactaccac cccaagaggg gatatagtta
     1621 acgccttgcc atcgataata gcccccatat aactcataat ctcgaacgat cttagcgcca
     1681 taggcccggg gccgctggac tgccaggtat actccggcgg gaagatacgc accattcgaa
     1741 accaatgtgc cgctgggaca tcgcccttgc cgatagcaat gaaactaccg atacggggct
     1801 ccgcgtacag ggcaccgtag tggtattcag aggcggaagg cagatttaca tagtaaccat
     1861 gacgcatatg ctccgccaca gtatcataga aaaagccgta
//
LOCUS       DASQSL010002212         1263 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_123449, whole genome shotgun sequence.
ACCESSION   DASQSL010002212 DASQSL010000000
VERSION     DASQSL010002212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1263
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123449"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1092
                     /locus_tag="VE844_22170"
     CDS             <1..1092
                     /locus_tag="VE844_22170"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018867031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HZC03947.1"
                     /translation="HRGYPIDQLAEHSTFLEVCYLLIYGELPSRPQMDEFEAAVKQHS
                     MVHEHLIKFYGGYRYDAHPMAMMVGVMGAMASYYHDAMDLFDPEEQDSTARRIIGKMP
                     NIASKCYKYGIGQPFVYPNNALGYVENFMNMMFAQPSELYAPYPTAVRALDLLFILHA
                     DHEQNASTSTVRLAGSAESNPYTCVAAGMATLWGRAHGGANEAVVQMLNEIKHPNNIK
                     KFIDRAKDKNDPFRLMGFGHRVYKNYDPRAAIIRQACHDVLDRMGAHAHRPMFEIAME
                     LERIALEDAYFIERKLYPNVDFYSGIILSALEIPTRMFTVMFALARSAGWIAHWMEMI
                     TDPEFRIGRPRQLYIGAKIRDYVPIEQRS"
     gene            1149..>1263
                     /locus_tag="VE844_22175"
     CDS             1149..>1263
                     /locus_tag="VE844_22175"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012439107.1"
                     /note="catalyzes the oxidation of malate to oxaloacetate;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HZC03948.1"
                     /translation="MKTPVHVAVTGAAGQIGYALLFRIAAGEMLGKDQPVML"
BASE COUNT          285 a          330 c          364 g          284 t
ORIGIN      
        1 caccgcggtt atccgatcga tcaactggcc gaacacagta cctttttaga ggtttgctat
       61 ctcttgatct acggtgagtt gccgagccgg ccgcagatgg acgaattcga ggcggccgtc
      121 aagcagcata gcatggtgca tgagcatctc atcaagtttt atgggggtta tcgctatgat
      181 gctcatccga tggccatgat ggtcggggtc atgggggcga tggcgtccta ctatcatgac
      241 gcgatggatc tatttgaccc cgaagagcag gatagcaccg cccgacgcat catcggcaag
      301 atgcctaata ttgcctctaa atgctacaag tatggcatcg gccagccctt cgtctatccc
      361 aataacgccc tgggctacgt cgagaatttc atgaatatga tgttcgctca gccctccgag
      421 ctttatgcgc cgtatccgac cgccgtgcga gccttggatc tgctgttcat cctacacgct
      481 gatcacgagc agaatgccag cacctccacg gtgcgtctgg cggggagtgc cgaaagtaac
      541 ccttacacgt gtgtagcagc gggcatggcc accctctggg gacgcgccca tggcggggcg
      601 aatgaggcgg tggtccagat gctaaacgag atcaaacatc ccaataacat caaaaagttt
      661 atcgaccggg ccaaggacaa gaatgatccg ttccgcctca tgggattcgg ccatcgggtc
      721 tataagaact atgacccgcg cgcggcgatc atccgccagg cctgccatga tgtgctggat
      781 agaatgggag cccatgccca tcggcccatg ttcgagatcg ccatggagtt ggagcggatc
      841 gcgctcgaag acgcgtactt tatcgaacgc aagctctatc ccaatgtcga tttttattcg
      901 ggcattatcc tgagcgccct cgagatccca acacgtatgt tcacggtgat gtttgcgctg
      961 gcgcgttcag ccgggtggat agcccactgg atggagatga ttaccgatcc cgagttccgt
     1021 atcgggcggc cgcggcagct atacatcggt gcaaaaatcc gtgattatgt tcctatagag
     1081 cagcggtcct gatcgcggct ggatcggata agaaccgtct taaaacaagc gtaattaagg
     1141 ggtgaatgat gaagacgccg gtacatgttg cagtcaccgg ggctgcaggg cagatcggtt
     1201 atgcgttatt atttcggatc gctgcgggag agatgttggg gaaagatcag ccggtgatgc
     1261 tga
//
LOCUS       DASQSL010002213         1333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_177517, whole genome shotgun sequence.
ACCESSION   DASQSL010002213 DASQSL010000000
VERSION     DASQSL010002213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1333
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177517"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(140..433)
                     /locus_tag="VE844_22180"
     CDS             complement(140..433)
                     /locus_tag="VE844_22180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011802145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GYD domain-containing protein"
                     /protein_id="HZC03949.1"
                     /translation="MPTYVILMNWTDQGIRADRDTVHRRDQADALAEKHGARIEQVYW
                     TMGHHDIVAILEAPDDESASAYILDLTSTGYLRTATLRAYDHDQMQAILQRTG"
     gene            complement(701..1111)
                     /locus_tag="VE844_22185"
     CDS             complement(701..1111)
                     /locus_tag="VE844_22185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03950.1"
                     /translation="MSEKTANAVQLLNQLADAETREIEVDSRHIAATKNWLVRMFYDY
                     GLEDAKRHLEISTMIRSWLEQGKPSVGKLDVSATELETEADSEVSVGSLAKQLLDLID
                     DTDAKALLQSIVSDEEKHEQGLRALKQRVLEQNE"
BASE COUNT          268 a          372 c          349 g          344 t
ORIGIN      
        1 gcctaaattc agggtctgag cgttactcgg accccttttc ggacagtttc tccaggcagt
       61 agggtgaata agggcaagaa gaaggaccgg ggcttaacag gagcgccccg gcccagtaga
      121 aatgtgtgct cgttatctct cagccagttc tttggaggat cgcctgcatc tggtcgtgat
      181 cgtaggcccg aagcgtagcc gtcctgaggt agcccgttga ggttagatca aggatgtagg
      241 cggaggcgct ctcgtcgtcg ggggcttcga gtatggccac gatgtcgtgg tgacccatcg
      301 tccagtagac ttgctctatc ctcgctccat gcttctcggc cagggcatcg gcttgatcgc
      361 gccggtggac ggtgtcccta tcggccctta tcccttgatc ggtccagttc atcaagatga
      421 cgtaggtggg catatcctgc gtcctccttc ctcccgcttt agctgaaagc ggggcctaac
      481 ccttatccac cgcgagcatg atatcagcgt tacataggct aacgcaactt ccgagaatac
      541 cccttccagg cagttgggtg aatagcatct gatcgatgcg ccgaaccccc atcggctggc
      601 atcatgctca tggtgtcggc gggcgagtgt ctctagccgg ttgcgaggcg gggagcttcc
      661 tgtaacgagc tccaaggcgt ctacacgacg aagaccatta ttattcgttc tgctccagca
      721 ctctctgctt taatgctcgc agaccttgtt catgtttctc ttcatcgctt acgatacttt
      781 gtaggagagc cttagcatca gtgtcgtcaa ttaaatcaag caactgctta gctagtgatc
      841 ctacagacac ttcagagtca gcttctgttt ccaattcggt tgctgagaca tctagcttac
      901 cgactgaggg tttcccttgc tcgagccagc tacggatcat tgtgctgatc tctaagtgcc
      961 ttttcgcatc ttcgagcccg tagtcgtaaa acattcgaac aagccagttc tttgtggcgg
     1021 cgatatgcct tgaatcgact tcaatttcac gtgtctctgc gtccgctagc tggttcaaca
     1081 gttgaacagc gtttgctgtc ttctctgaca tatgccctcc tttcaacgag gtccgtaagg
     1141 tcatgcgcct cgagcacgtg agccgacgaa ccaaaatttc gtacccgcac tactgcatca
     1201 tagatttcat ccggtttcgg gacaagcggc atccgcgcga gatgggagcg ggtgagatcc
     1261 gcgttgacct gtctcatctt gccacggcaa agaatgtagc tgccacgacc tagcacgtag
     1321 ccctctcggc att
//
LOCUS       DASQSL010002214         1202 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_177550, whole genome shotgun sequence.
ACCESSION   DASQSL010002214 DASQSL010000000
VERSION     DASQSL010002214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1202
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177550"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..939)
                     /locus_tag="VE844_22190"
     CDS             complement(<1..939)
                     /locus_tag="VE844_22190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03951.1"
                     /translation="MHTPASSTFVLLFLGVVQGCLVTGCGGDATGDAGETPLHYHLVC
                     VSTADTQTAPCDSTESLSLFQTWVQEALSLPQSTFSIWSVDPARNQYHHYFTACIPPT
                     WGASVWKKKADFITRARQAITGTQHGQPVQDDCHPPKPRAPGLHQLVVSPADASLHPD
                     VLEKVASASPAPSFNQSVVCDASASTLGVACNATSLLRAFDFWVAEGLARPGSSLSVA
                     VVGPTRDTMRTVFDLSVPDRSAGERIAYLLVARAQLAQLPGTSLGENASAIVEAIHVV
                     VSKLRERQGRYALIVLSDLRQLSNEWDFDEAIPKSSI"
     gene            complement(959..>1202)
                     /locus_tag="VE844_22195"
     CDS             complement(959..>1202)
                     /locus_tag="VE844_22195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03952.1"
                     /translation="AAEQQRVEQLKQARQCAVVFANSLIAALEEKRFYFLRAANKANA
                     SHLLRPNAPPDHAQSRMKPWRIVHPLLPPGKNGHGN"
BASE COUNT          254 a          326 c          389 g          233 t
ORIGIN      
        1 gatggaggac tttgggattg cttcatcgaa atcccattcg tttgacaact ggcgcagatc
       61 agagagaacg ataagcgcgt accggccctg tcgctcacgc agcttgctga ctacgacatg
      121 aatcgcctcg acgatcgccg aggcgttttc tcccaacgat gtacccggta gctgtgcgag
      181 ttgcgcgcgt gccacaagca ggtatgcgat tcgttcgcca gctgagcgat cagggacgct
      241 gagatcaaag acggtgcgca tggtgtcccg tgttgggccg accacagcaa cggacaggga
      301 tgaccccggg cgagcaagcc cctcagcgac ccagaagtca aacgcgcgaa gcagcgaggt
      361 cgcattgcac gcgacaccca gggttgatgc agacgcatca cagacgacac tttgattgaa
      421 ggacggcgcc gggctggcag acgccacctt ttccaggaca tccgggtgca gtgacgcgtc
      481 ggccggggac accacaagct gatggagacc cggggctcgt ggcttcggcg ggtgacaatc
      541 atcctgcaca ggctgcccgt gttgtgtgcc agtgatcgcc tgtcgcgcgc gcgtgatgaa
      601 atcagccttt tttttccaga cagacgcccc ccatgttggg gggatacagg cggtgaaata
      661 gtggtggtac tggttgcgtg ccggatccac agaccagatt gaaaacgtcg actggggcag
      721 ggagagcgct tcctgcaccc aggtttgaaa gagcgaaagg ctctctgtgc tgtcgcacgg
      781 ggctgtctga gtgtctgcgg tcgacacaca gaccaggtga tagtgcagag gggtttcacc
      841 tgcgtcgcct gtagcatcgc caccacagcc ggtcacgagg cagccttgta caacgccaag
      901 gaacaacagg acgaaagtcg atgaagcggg tgtatgcatg gtaatcttcc cggatgattt
      961 agttgccgtg cccgttcttg ccggggggaa gcagagggtg gacaatacgc cagggcttca
     1021 tccgtgattg cgcatgatcg ggtggcgcat taggcctgag gaggtgagaa gcgttcgcct
     1081 tgttggcggc gcggagaaag taaaaacgtt tttcttcgag ggcggcgatc agactgttgg
     1141 caaaaaccac ggcacactgg cgcgcctgtt tcagctgctc cacccgctgt tgttcggcag
     1201 cg
//
LOCUS       DASQSL010002215         1806 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_177557, whole genome shotgun sequence.
ACCESSION   DASQSL010002215 DASQSL010000000
VERSION     DASQSL010002215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1806
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177557"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..283
                     /locus_tag="VE844_22200"
     CDS             <1..283
                     /locus_tag="VE844_22200"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HZC03953.1"
                     /translation="GIERSPDLDKAREKFQALTDGVLILPFSFAVAERCARLRETLRT
                     QKKRVNSRALDLIIAATALEYDITLITKNTEDFKDIPDLILYQPHERAL"
     gene            451..1392
                     /locus_tag="VE844_22205"
     CDS             451..1392
                     /locus_tag="VE844_22205"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HZC03954.1"
                     /translation="MKFGFYLPNNGPTARPEPLAEIARRGDELGFYCMVAGDHILVPG
                     DIESPYPYTVGGQFPGGASGEYLEQLTLLTYLAGVTRNIRLVPSVMIVPYRPPLLVAK
                     VLATLDVLSQGRLTLGVGVGWMEEEFEALGSPPFAERGEVTNEYLRAFKELWTSDSPT
                     FEGKYSRFSNIKFLPKPVQKPHPPIWVGGQSRRAIRRAAELGNGWHPVGAIPAAPLEP
                     EDLSQSLALLRRYAERAGRDPAELDVSIKAPLYDSAPAAGTPRRRFSGSPEQIRQDVQ
                     TYADIGVTHIIFDIRGANLNQALERLDWFARDIMAHA"
     gene            complement(1511..>1806)
                     /locus_tag="VE844_22210"
     CDS             complement(1511..>1806)
                     /locus_tag="VE844_22210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03955.1"
                     /translation="FSGEGQEPLRGLAGDFVHTPKEVAHTFRNVRTTVGRLLTIAVPA
                     GMDQFFAEAGQPADSAAELPPQSGRPTPEEIEHVIRIAQKHGIEIKLPPASAP"
BASE COUNT          387 a          541 c          499 g          379 t
ORIGIN      
        1 agggattgag agaagtcctg atctggataa agcccgcgag aaatttcagg cccttaccga
       61 tggcgtgctc attctcccct tctcatttgc ggtggcagag cgctgtgctc gattgcggga
      121 aaccttgcgg acccaaaaga agcgggtaaa ctcccgggca ttggatctta ttattgccgc
      181 aactgccctt gagtacgata tcaccttaat aactaagaac actgaggact tcaaagatat
      241 cccggatctt atcctctacc aaccacacga acgagcatta taagataagg ccttgttatt
      301 actccgagcg gtttataggt gacatcggtg ctacctccca acgctacgag ccaaatactg
      361 gcagcaaaaa agtgtcatcc attaagcgct cccatgaata agttgttaaa cttcattagt
      421 gagagactac ataaccaggg gaggtgaaag atgaaatttg gcttttattt gcccaataac
      481 ggccctaccg cccggccgga acccctggcg gaaatcgccc ggcggggcga cgaactgggc
      541 ttttactgca tggtggccgg agaccatatt ctggtgcccg gagacatcga gtccccatac
      601 ccctacaccg tcggcggcca gttccccggc ggcgcaagcg gggaatacct ggaacagctg
      661 actctgctga cctacctggc cggggtcacc agaaacatcc gcctcgtgcc cagcgtgatg
      721 attgtccctt accgaccgcc gttgctagtc gccaaggtgc tggctactct ggacgtgctt
      781 tctcagggcc gcctcaccct gggcgtcggc gtcggttgga tggaagagga gtttgaagcc
      841 ctcggctctc cccccttcgc cgagcgcgga gaggttacca atgagtacct gcgggccttc
      901 aaagaactat ggactagcga cagccccact tttgaaggca aatactcccg gttttccaac
      961 atcaaattcc tgcccaagcc ggtacagaag cctcaccctc ccatctgggt gggcggccag
     1021 agccggcggg ctatccgccg ggccgccgag ctaggcaacg gctggcatcc ggtaggcgct
     1081 atcccggcgg cccctctgga gccggaggat ttgtcccaga gcctggcttt gctgcgccgc
     1141 tacgcagaaa gggccgggcg cgacccggct gaactggacg tgtccataaa agccccgttg
     1201 tacgattccg ctcccgccgc cgggactccg cgccgccgct tctccggctc gccggaacaa
     1261 atccggcaag acgtgcagac ctacgccgat atcggcgtca cccatataat ctttgatata
     1321 cggggtgcca acctgaacca ggccctggaa cgcctggact ggtttgcccg cgatattatg
     1381 gctcatgcct gaagatagct gattgatata cgctagagac agacgctcag gcccacccct
     1441 atggaagcac atcgcctggt cagggacgaa accaggtcag gaaatggctt ctattcctct
     1501 aatcttatta tcagggggcg gaggcaggcg gcagcttgat ctcaatcccg tgtttctggg
     1561 ctatccggat gacatgttca atctcctctg gtgttggcct cccagactgt ggcggcagct
     1621 cagcagcgct atcggctggt tgtcctgctt ccgcaaaaaa ctggtccatt ccggctggca
     1681 ccgcaatggt gagtagtcgg ccaacagtgg tccggacgtt tcggaaagta tgggctacct
     1741 ccttgggggt gtggacgaag tcgccagcca accctcgcag tggctcctgg ccttccccgg
     1801 agaact
//
LOCUS       DASQSL010002216         1322 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_123596, whole genome shotgun sequence.
ACCESSION   DASQSL010002216 DASQSL010000000
VERSION     DASQSL010002216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1322
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123596"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            364..1233
                     /locus_tag="VE844_22215"
     CDS             364..1233
                     /locus_tag="VE844_22215"
                     /inference="COORDINATES: protein motif:HMM:NF012427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide disphospho-sugar-binding
                     domain-containing protein"
                     /protein_id="HZC03956.1"
                     /translation="MPSLQKVLALSPFLSRAFLKLAKWKLATRFEPVYRLRAELGLPP
                     GEHPIVEGQHSPALVLALFSSVLAKPQPDWPPQTCVTGFPFYDRRGRGSDRTGLSPEL
                     VTFLDEGPPPIVFTLGSSVFWAAKNFYRDSVAAAHALGQRALLLIGDAYNYPTEPLPN
                     GMAAFEYAPYGEVLPRARIIVHHGGIGTTGQSLRAGKPMLVVPFAHDQFDNAARITRL
                     GVGRILPRAKYNTMRAIKELSRLLKEQSYTIRATAIARHVQIEDGIRTARDAIGEQLL
                     HHRVDAAAQAGRL"
     gene            1193..1322
                     /locus_tag="VE844_22220"
                     /pseudo
     CDS             1193..1322
                     /locus_tag="VE844_22220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011052967.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3 family transposase"
BASE COUNT          275 a          382 c          360 g          305 t
ORIGIN      
        1 catccagtca tcgccgcgac tgaagcctac cgcgaaaagg tggaagcgct cgctattgat
       61 ttccatccgg tgcggccggc gttatcttct tacgatacgc ccgaggaggt aagcgaaatc
      121 gtggagaaat gcatggaccg aaaaacaggg gcggctgaga tcttcaactc gcttattttt
      181 ccctatctcc cggatatcta tgaggacctc catagtgccg tgcgcaaagc cgacctcctc
      241 gtgacccatc cgctcccgct ggttggtccc atcgtagcgc aaaagacggg catcccttgg
      301 gtgtccagcg tgctcgctcc gttctcgtta ttttctgcct atgatccgcc ggtaggggcg
      361 cagatgccca gtctgcaaaa ggttttagcg ttgagcccat ttttgagtcg tgcattcctc
      421 aaactagcca agtggaagct tgccaccagg ttcgagccag tgtatcggct tcgggcggaa
      481 cttggcttac cgccgggtga gcatcctatt gtcgagggtc agcactcgcc tgcccttgtg
      541 ttagcgctgt tctcctcggt actggcgaag cctcaaccgg actggccacc ccagacgtgc
      601 gtcaccggct ttccttttta tgatcgccga ggtcggggaa gcgataggac gggtctgtca
      661 cccgagttag tgacatttct ggatgaggga ccaccgccca tcgtttttac tttgggatcc
      721 tcagtgttct gggcagccaa gaacttttac cgggacagtg tggccgcagc acacgcgctt
      781 ggtcagcgcg cgttattgtt aattggcgat gcgtataact acccaacaga gccccttcca
      841 aacggtatgg ctgccttcga gtatgcgccc tacggtgaag tgctaccgcg tgcccgcatt
      901 atcgtccatc acggcggtat tggtacgaca ggacagtctt tgcgcgctgg caagccgatg
      961 ctcgtcgttc cctttgctca cgaccaattc gacaatgcgg cgcgcatcac gcgcctcggt
     1021 gtaggtcgta tactgccacg agcgaagtac aacaccatgc gcgccatcaa agagctgagt
     1081 cgattactga aagaacagag ttacacgata agagccactg caattgcgcg tcacgttcaa
     1141 atcgaggacg gtatacgcac tgcgcgcgat gctatcggag aacagctcct gcatcaccgc
     1201 gtcgacgctg ctgcgcaagc tgggcgctta tagcaagaaa aataagcttt accagaccat
     1261 gagggtaatt cgcacggcct ttttgctgca ctacctgagc gatcctgagc tgtgtcgcac
     1321 ca
//
LOCUS       DASQSL010002217         1144 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_177620, whole genome shotgun sequence.
ACCESSION   DASQSL010002217 DASQSL010000000
VERSION     DASQSL010002217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177620"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1038
                     /locus_tag="VE844_22225"
     CDS             <1..1038
                     /locus_tag="VE844_22225"
                     /inference="COORDINATES: protein motif:HMM:NF016847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03957.1"
                     /translation="KHLVSMSCKSSLCLRCSKVYVDNWVSQVSRVLHEGVIYRHIILT
                     VPAMFRTIFYQNASALVNALMRCGTRCLDDFYSEVKGKALKGGYITVIHTHGRNGHYH
                     PHLHVIATSGGYDEVEERWEHLSFLPYALLRHKWQWHLMDTFRKTLATDEMKRLVDQC
                     YRTYPGGLVTNVQKGQVPSHYQSLASYVAKYVVSPPISVRRIDRYDGHRVTYHYRSHR
                     THRTTYETVDVMTFIGRMVQHTMSKGFKRIRYYGVQATKTFAKVKAAIQAALAKVEGV
                     VKGAVKIIARLNYRQRYEKSTGRDPLICPHCGEEMGLWRIWHPRYGVIYDEAQVIKRG
                     TYASSGQRSGP"
BASE COUNT          254 a          278 c          371 g          241 t
ORIGIN      
        1 aaacacctgg tgtcgatgag ctgtaaatcg tcgttgtgcc tacggtgttc gaaggtctac
       61 gtggacaact gggtgagcca ggtgagtcgt gtactacacg agggtgtgat ctatcggcac
      121 atcatcctga cggtaccggc gatgtttcgc accatcttct accagaatgc ttcggcgttg
      181 gtgaatgcat tgatgcggtg tgggacgcgg tgcctggatg atttttatag cgaggtgaag
      241 ggcaaggcgc tcaagggtgg ttatatcacg gtcatccaca cgcacggacg caacggtcac
      301 tatcacccgc acctgcacgt gatcgctacg agtggtggct atgatgaggt ggaagaacgc
      361 tgggaacatt tgagtttttt gccctacgcg ctgctgcgtc acaagtggca gtggcacttg
      421 atggacacgt ttcgaaaaac gctggcaacg gacgagatga agcgtctggt ggatcagtgt
      481 taccggacgt atcccggtgg tctggtgacc aacgtgcaaa agggtcaggt gccgtcgcac
      541 taccagagtt tagcgagcta cgtggccaaa tatgtggtga gcccgccgat ctcggtcagg
      601 cgtatcgatc gctatgatgg tcaccgtgtc acctatcact accggtcgca ccggacgcac
      661 cggacgacct atgaaacggt cgatgtcatg acgtttatcg gccggatggt gcagcacacg
      721 atgtccaagg gcttcaagcg tatccgttac tatggggtgc aagcgaccaa gacgtttgcc
      781 aaggtgaagg cggcgatcca agcggcgctg gccaaggtgg aaggtgtggt caagggtgcg
      841 gtgaagatca tcgctcggct gaactatcgg cagcggtacg agaaaagcac ggggcgagac
      901 ccgttgatct gtccgcactg tggggaagag atggggcttt ggcgcatctg gcacccgagg
      961 tatggggtga tctatgacga ggcgcaggtg atcaaacggg gcacctatgc atcaagcggg
     1021 caacggtccg gtccttgagg caaagcggta gtcttaaagg tgcgcccaca gggcgcctat
     1081 gttcacacat cgggagggtc tctaagctcg gacaacgcat cggctctaca ccagggtgaa
     1141 cata
//
LOCUS       DASQSL010002218         1373 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_205506, whole genome shotgun sequence.
ACCESSION   DASQSL010002218 DASQSL010000000
VERSION     DASQSL010002218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1373)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1373)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1373
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205506"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1298)
                     /locus_tag="VE844_22230"
     CDS             complement(<1..1298)
                     /locus_tag="VE844_22230"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HZC03958.1"
                     /translation="MQVVMVSRDITERKEMEAYVLHLSYHDPLTGLPNRVLLEDRMKQ
                     VTAYDDRRHSHAAVLFIDLDRFKDINDSLGHAAGDRLLQEVAERLSRCVREEDTVARL
                     SGDEFVALLVGIQDVHDAALIANKIIATVSAPCRIEGRELRVSPSIGIAIFPNDGKNI
                     EALMRNADTAMYYAKQAGRSQFSFFTPQMNETASRRLAIPSALQRAVEQGEFTLYYQP
                     RVCATSGEIRGFEALIRWPQPNGEWIPPSQFIPIAEETGIIKAIGEWVVREACRQVQR
                     WSAEALPVQPIAVNVSARQFRRDGVVQTMKDILRETGIPPTMLKVELTESTVMADPVA
                     AAKILHEIRGLGVHIAIDDFGTGYSSLACLKRFPVDTLKIDAAFVRDIATDPDNAAIV
                     SAIIALAHHLNLTVVAEGVETADQMAFLVEHGCEEIQGYY"
BASE COUNT          285 a          409 c          381 g          298 t
ORIGIN      
        1 aagtaatatc cctgtatctc ttcacagccg tgctccacca ggaaagccat ctgatcggcg
       61 gtttccactc cctcggcaac caccgtcaag ttcagatgat gggcgagcgc aataatggcc
      121 gaaacgatgg ccgcattatc gggatcggtc gcaatatcgc ggacaaacgc cgcatcaatc
      181 ttgagcgtgt cgacggggaa acgcttcagg caggcgagcg aggaatagcc ggtgccaaag
      241 tcatcgatcg cgatatgcac gccgagacct cggatttcgt gcagtatctt ggcggcagcg
      301 accggatcgg ccattacggt ggattccgtg agctctactt tcagcatcgt aggcgggatg
      361 ccggtttccc gcaaaatgtc tttcattgtt tgcacgacac cgtcgcggcg gaattgccgg
      421 gctgatacgt tgacggcgat cggctgaacc ggtagagctt ctgcgctcca gcgctggact
      481 tggcggcagg cttcacggac cacccactcg ccgatcgctt taatgatgcc ggtttcttcc
      541 gcaatcggaa taaactgact cgggggtatc cactcaccgt tcggttgcgg ccagcggatc
      601 aaagcctcaa acccgcgtat ttcgcccgag gtggcgcaca ccctcggttg gtagtacaag
      661 gtgaattcgc cctgctcaac cgcacgctgc aatgcgctgg gaatcgccaa gcgcctggag
      721 gcggtttcgt tcatttgagg cgtaaagaac gagaactgac tgcgcccggc ttgcttcgcg
      781 tagtacatgg cggtatcagc gttacgcatc agtgcttcta tgtttttgcc gtcattagga
      841 aagatcgcaa taccaatact cggcgatacg cgaagctctc ttccctcgat ccggcatggc
      901 gctgaaaccg tagcgattat tttatttgca atcagcgcgg catcgtgtac atcctgtata
      961 cctaccagta gcgccacgaa ctcatctccg ctgagccgcg ccaccgtgtc ttcctcgcgc
     1021 acgcacctac tcaggcgttc ggccacctcc tgcagcaggc gatctcccgc cgcatggccg
     1081 aggctgtcgt tgatatcctt gaagcggtcc agatcgataa acagcacggc cgcgtgtgaa
     1141 tgccggcggt cgtcatacgc cgtcacctgc ttcatgcgat cctcgagcag cacgcggtta
     1201 ggcagcccgg tcagcggatc gtgataggaa agatgcagga cataggcttc catttccttg
     1261 cgctcggtga tgtcgcgcga gaccatcacc acctgcacga ctttgccgga tgtatcatgg
     1321 accagactgg cttcggattc cagaaagcgc tcaccgctag tgggtaacag cac
//
LOCUS       DASQSL010002219         3617 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_205526, whole genome shotgun sequence.
ACCESSION   DASQSL010002219 DASQSL010000000
VERSION     DASQSL010002219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3617
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205526"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            173..247
                     /gene="pqqA"
                     /locus_tag="VE844_22235"
     CDS             173..247
                     /gene="pqqA"
                     /locus_tag="VE844_22235"
                     /inference="COORDINATES: protein motif:HMM:NF019654.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone precursor peptide PqqA"
                     /protein_id="HZC03959.1"
                     /translation="MKWETPSYNEVRFGFEVTMYINNR"
     gene            340..1257
                     /gene="pqqB"
                     /locus_tag="VE844_22240"
     CDS             340..1257
                     /gene="pqqB"
                     /locus_tag="VE844_22240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002814312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqB"
                     /protein_id="HZC03960.1"
                     /translation="MYIHVLGSGAGGGFPQWNCNCRNCRGLRNGEITARPRTQSSIAV
                     SGNGMDWVLFNTSPDIRAQLESFPALQPARAVRDTAIGAIVLMDAQIDHTTGLMMLRE
                     HRQPLEVYCTNQVYQDLTTGYPLFRVLEHYCGVEWYPIPLEDGESFSIPKAEPLRFTA
                     IPLTSKAPPYSPHRQDPHAGDNIGIRVEDTQSGKNLFYAPGLGQIEPHLQAYMEEADC
                     LLIDGTVWTDDEFAREGISTKRAREMGHLQLSGEGGMIGFLNSLFRPRKILIHINNTN
                     PILNEDSPERKALEQAGIEVAYDGMEITL"
     gene            1276..2004
                     /gene="pqqC"
                     /locus_tag="VE844_22245"
     CDS             1276..2004
                     /gene="pqqC"
                     /locus_tag="VE844_22245"
                     /EC_number="1.3.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005374447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline-quinone synthase PqqC"
                     /protein_id="HZC03961.1"
                     /translation="MTAEERTPWLAEEFEQRLRAKEKYYHIHHPFHQLMNSGKLDRPE
                     IKGWVANRFYYQISIPIKDAAILANCPEREARRHWLSRIIDHDGREGEEGGIEAWLQL
                     GEAVGLTREELWSQAQVLPGVRFAVKAYVNFARQASWQEAACSSLTELFAPTIHEQRL
                     NKWPEYYPWIEPQGYAYFRKRLSEARRDVDYGLAITLEYFKTRNQQERALAILQFKLD
                     VLWSMLDAMWMAYIEKRPPYYNVS"
     gene            2004..2294
                     /gene="pqqD"
                     /locus_tag="VE844_22250"
     CDS             2004..2294
                     /gene="pqqD"
                     /locus_tag="VE844_22250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012345284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis peptide
                     chaperone PqqD"
                     /protein_id="HZC03962.1"
                     /translation="MAAAFTDGNIPTLAPGFRFQWEEAQGCYVILYPEGMVKMNQSAG
                     EILRRCDGSKTVGVIVQDLNQQFPDVDNLKADVHKFLEVAYDHGWIRFNPPA"
     gene            2257..3414
                     /gene="pqqE"
                     /locus_tag="VE844_22255"
                     /pseudo
     CDS             2257..3414
                     /gene="pqqE"
                     /locus_tag="VE844_22255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014251655.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_process: GO:0018149 - peptide cross-linking [Evidence
                     IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqE"
     gene            complement(3433..>3617)
                     /locus_tag="VE844_22260"
     CDS             complement(3433..>3617)
                     /locus_tag="VE844_22260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03963.1"
                     /translation="RGAGDARSGAQGIEYTAEIEWDEGSRVFGGEVGDSNPLGDIERE
                     SGLYGKAFLLPLCQYA"
BASE COUNT          808 a         1038 c          971 g          800 t
ORIGIN      
        1 aagtcagtct cttttttggt ggcatatttg ctgctattct tttggtagcg ttaccgagga
       61 ggttatgtgc ttttcacatg cagaaacctc agataggact cccgtaggct ttctatctct
      121 accggggacg agatgttatc atcattaacc ttaaaaccag aggaggcatt tcatgaagtg
      181 ggaaacccct tcatacaacg aggttcgttt tggcttcgaa gtgacgatgt acattaataa
      241 ccgttgatgt atagtgcgac cgaggggccg cttgcggccc ctcagtattt cacccctcct
      301 acaaaccggc aattctctat cctactctta acccgtgtaa tgtatatcca tgtgcttggt
      361 tcgggtgcgg gcggcggttt tccacaatgg aactgcaatt gccgcaactg ccgtgggctg
      421 cgtaacggtg agatcacagc gaggccgcgc acccaatcct ccatcgccgt cagcggcaat
      481 ggtatggact gggttttatt taatacctcc ccggatatcc gagcgcaact cgagtccttc
      541 cctgccctgc agccggcgcg cgccgtgcgc gataccgcca tcggcgcgat cgttctgatg
      601 gacgcccaga tcgaccatac cacggggctc atgatgctgc gtgaacatcg gcaaccgctc
      661 gaggtctact gcaccaatca ggtgtaccaa gaccttacga ccggttatcc cttgtttcgg
      721 gtgctggagc attattgcgg tgtggaatgg tatccgatcc cactcgaaga cggtgaatcc
      781 ttttcgattc ccaaggccga gccgctgcgt tttaccgcca taccgctgac aagcaaggcg
      841 cccccttact cgccgcatcg gcaagatccc cacgccgggg acaacatcgg catccgcgtc
      901 gaggataccc agagcggtaa aaatctgttt tacgctccag gtcttgggca gatcgagcct
      961 catctccaag cctatatgga agaggcggac tgcttgctca tcgatggcac cgtgtggacc
     1021 gatgatgagt tcgcgcgcga agggatcagc accaagcgcg cacgcgagat gggacatctg
     1081 caattatccg gcgagggcgg tatgatcggt tttctcaatt ccctgtttcg gcctcgcaag
     1141 atcctgatcc atatcaataa caccaatcct atcctcaacg aagattcgcc ggaacgtaag
     1201 gcgctcgaac aggccgggat cgaagtagcc tacgatggca tggagatcac cctttagaaa
     1261 actcgagaaa gcgtaatgac tgccgaagag aggaccccct ggctagcgga ggaatttgaa
     1321 caaaggcttc gggccaagga aaagtactac cacatccatc acccgtttca tcaattgatg
     1381 aactccggaa agctcgaccg gcccgagatc aaaggctggg tggccaaccg tttttattac
     1441 cagatcagca tccccatcaa ggacgcggcg atcctcgcca attgcccgga acgcgaggcg
     1501 cgccgccatt ggctaagccg catcatcgac catgatggca gagaagggga ggaaggcggg
     1561 atcgaggcct ggttgcaact cggcgaggcg gtcgggctta ctcgcgagga actctggtcg
     1621 caagcacagg tgttgcccgg tgtacgcttt gcagtgaagg cttacgtcaa ttttgccagg
     1681 caggccagct ggcaggaagc ggcgtgttca tcgctgactg aactctttgc cccgacgatc
     1741 cacgagcagc ggctcaataa gtggccggag tattatccct ggattgagcc tcaaggctat
     1801 gcctatttcc gcaaacgctt gagcgaggcg cggcgcgatg tagactatgg gctggccatc
     1861 accttggagt attttaaaac ccgcaaccag caggaacgcg cactggccat cctgcaattc
     1921 aagctcgatg tgctctggag catgctggat gcgatgtgga tggcttatat tgaaaagcgc
     1981 ccgccttatt acaacgtctc gtgatggctg ccgcttttac tgacgggaac attccaacgc
     2041 tggctcccgg ctttcgcttc cagtgggaag aggcgcaagg ctgttacgtc atcctctatc
     2101 ccgaaggcat ggtcaaaatg aatcagagcg ccggtgagat cctgcgacgc tgtgatggca
     2161 gcaagaccgt gggagtcatt gttcaagact tgaaccaaca gtttccggac gtcgacaacc
     2221 tcaaggccga tgtccataaa tttttagagg tggcctatga ccacggctgg atccgcttca
     2281 acccccctgc ctaaaccctt gtggctgctc gccgagctga gctacgcctg tcccctgcaa
     2341 tgcccgtact gttccaatcc gctggacttt gcaagctacc ggcacgagct ctctactaga
     2401 gattggctgc gggtattgcg ggaggcgcgc gcgctcggtg ccatccagct tggcttctcc
     2461 ggtggggaac ccttagtgcg gcgggatctg gaggtgttga tcgccgaggc gtgccgactc
     2521 ggttattaca gcaacctgat tacctcagga gtcggtatgg atgaggcccg catcaaagcc
     2581 ttcaaagagg cggggctcga tcacattcag atcagcgtgc aggcgagccg tgaagatctt
     2641 aacaactaca tcgccggcac cgattctttc cagcataaac tcgagatggc ccgcctggtg
     2701 aaacagtacg gctatcccat ggtgttgtgc tgtgtcctgc accggctgaa cgcggatcat
     2761 atcgagcaga tcttagagct tgcgatcggc ctgcaggccg attacgtgga attggccacc
     2821 acccaatact atggctgggc tttccacaac cgcgaccagc taatccctac ccgcacccaa
     2881 ctcgagcggg cagaggccat cgcccatgcc tatcaggaaa gactcaaggg caagatgaag
     2941 atctactata tcgtgcccga ttactacgag gatcggccca aggcctgtat gaacggctgg
     3001 ggcgcggtgt ttcttaccat tgcccccgat ggcaccgcgc ttccctgtca tgcagcacgc
     3061 cagttgccgg atctcgagtt tcccaatgtc cgcaaccata gccttacgtg gatctggaat
     3121 gagtcgcctg ccttcaacaa gttccgcggc tttgattgga tgaaagaacc gtgcaagacc
     3181 tgtccggaac ggttcaagga ttttggcggc tgccgctgtt aggcctatat gctcaccggt
     3241 gatgcagcga acgccgatcc cgtatgcagc ctttccccgc accataacaa gatcctggag
     3301 gtcattgaac gggcgaacga tactatgagg ccggaagcga ggcctttgat cttccggaat
     3361 cctaaaaatt caagggcgat ccgtaccgag caaaagccga gacactgggt ctgagcctgt
     3421 caaactggca tctcacgcat attggcacag aggcagcaaa aatgctttcc cgtaaagccc
     3481 tgattcacgt tcaatgtctc ccagtggatt tgaatcgccg acttcccctc caaataccct
     3541 actaccctcg tcccactcta tttcggcggt atactcaata ccctgtgcac ctgatcgggc
     3601 atcacctgcc cctctct
//
LOCUS       DASQSL010002220         1214 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_177687, whole genome shotgun sequence.
ACCESSION   DASQSL010002220 DASQSL010000000
VERSION     DASQSL010002220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1214
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177687"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..226
                     /locus_tag="VE844_22265"
     CDS             <1..226
                     /locus_tag="VE844_22265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HZC03964.1"
                     /translation="CELSRVLAREDCLWAPRLKVSQQALSQRFLSFPAELFQRVLWAL
                     LPRLRQRWAERQRPPCRQRWCTRASTFRSC"
     gene            178..771
                     /locus_tag="VE844_22270"
     CDS             178..771
                     /locus_tag="VE844_22270"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03965.1"
                     /translation="MPAAVVHARQHFQELLIADGSTLEALFRKLKALQELPRGPLAGK
                     ICTVIDLASRLPRYVWFTERAQAHDINFIDRILKVSRAGLLWVFDRGLYDFGFFERLI
                     GRGAAWITRSKSNLSYSVSQVLEQSDFIRDRLIRVEGCAPLLRLVEVRFERQWYRYLT
                     RVIDPRILPAWVIADIYRRRWRIEEAFFIVKRVLNLS"
     gene            796..1092
                     /locus_tag="VE844_22275"
     CDS             796..1092
                     /locus_tag="VE844_22275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03966.1"
                     /translation="MLLQVWSTWLFFAVLVDLGDALADELELEFDRISLEMLLRGLYH
                     FSVARQRGLADDPVKYFAAPENQDLGVVKRLRKKRPPWAGLSPSKENLTISVFA"
BASE COUNT          222 a          296 c          397 g          299 t
ORIGIN      
        1 gtgtgagctg agccgggtgc tggcgcgtga agattgtctg tgggcaccgc gactgaaggt
       61 ctcgcaacag gcgctaagcc aacggttttt gagttttccg gcggagctgt ttcagcgggt
      121 actgtgggcg ctcctaccgc ggctgcggca gcgctgggcg gagcgccagc gccccccttg
      181 ccggcagcgg tggtgcacgc gcgccagcac tttcaggagt tgttgattgc cgatgggtcg
      241 acgttggagg ccttgtttcg taagctcaag gcgctccagg aactgccccg gggtcctctg
      301 gcgggcaaga tctgcacggt gattgatctg gccagtcgac taccgcgtta tgtgtggttt
      361 accgaacggg cccaggctca tgatatcaac tttattgatc gaatcctcaa ggtctcgcgc
      421 gcgggcctac tgtgggtctt tgaccgcggt ctttacgatt ttggtttctt tgagcggctg
      481 atcggacgcg gcgcggcgtg gatcacgcgc agcaaatcca atcttagcta tagcgtctct
      541 caggtgctgg agcaaagcga ttttatccgg gatcgactga ttcgggtcga gggctgcgct
      601 cctctgctgc ggctggtgga agtgcgcttt gagcggcagt ggtaccgtta tctgacccgt
      661 gtcatcgatc ccaggatact gccggcctgg gtgatcgcgg atatctatcg acgccgttgg
      721 cgtatcgaag aagcattctt tattgtcaag cgggtgctga atctgtcgta gctgtggact
      781 ggctcggaga atggggtgct actgcaggtg tggagcacgt ggttgttttt tgctgtgttg
      841 gtcgatttgg gcgatgccct agccgacgag ctggagcttg agtttgatcg catctcgcta
      901 gagatgctgc tgcgcgggtt gtatcacttc tcggtggcgc gccagcgggg gctggccgat
      961 gacccggtca agtacttcgc agcaccggag aaccaggact tgggggtggt aaagcgactg
     1021 cgcaaaaagc ggcctccgtg ggcgggttta tcgccatcaa aagagaactt gacaatctct
     1081 gtttttgctt aacttgtgac agatggttaa gcaactttgg tcaaactgaa taaagaagca
     1141 aggcgggttt cctaaattag cgagaaccgg aaatagttgg ccgaaaaccc agctttttaa
     1201 agcattaggt ctgg
//
LOCUS       DASQSL010002221         1048 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_177692, whole genome shotgun sequence.
ACCESSION   DASQSL010002221 DASQSL010000000
VERSION     DASQSL010002221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177692"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1048)
                     /locus_tag="VE844_22280"
     CDS             complement(<1..>1048)
                     /locus_tag="VE844_22280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03967.1"
                     /translation="VGVMFPALFGCRTPSELCRVRGWDKNWPSRLLHALPKRSWLKRL
                     RRLGLEGLVPLWRHVEGKSEATQSRWQWTWAVDDSVLHKYGEQLGLVGHWWSGQQHRV
                     LAGIDGLLLVVVIGDGKLVVPVDFTVRRPDPIGAGGPCRDKLSWAREMIDARLLALSK
                     RGLHLPAPIITADSWFSDSKLMEHVRNRHQGTLLVEGKVSYTFTLADGRHVNGHDLLE
                     GKWDKWSWRNHPWTPGVCYVRLQATSPTYGAVTVVIVDEHGKDRYYLLCLETALSGPV
                     LIRRWRRRHWIEFVFRVLKHLLATESCQVHSEDAYYGHLVLRLMASFVLFYTSRVVCK
                     SRLTMEEIIFSLKHY"
BASE COUNT          251 a          347 c          257 g          193 t
ORIGIN      
        1 gtagtgtttc aggctaaaga tgatttcctc catcgtcaga cgacttttgc agaccacacg
       61 cgaggtgtag aacaacacga agctcgccat caaccgtaac accagatgcc cataataggc
      121 atcctcgctg tggacttggc acgactcagt ggccaacagg tgcttcagca cccgaaagac
      181 aaattcaatc cagtggcggc gtcgccacct tcgaatcaag accgggccac tcagcgccgt
      241 ctctaaacac agcaagtagt agcgatcttt tccatgctca tccacgatca ccacggtgac
      301 cgcaccatag gtgggactcg tcgcttgtaa gcgcacataa catacgccag gcgtccaggg
      361 atgattccgc catgaccact tgtcccactt gccttctagc aaatcgtgtc cgttgacgtg
      421 gcgtccatcg gccaaggtga aggtgtaact gactttcccc tcgactaaca acgtgccttg
      481 atgccgattg cggacatgtt ccatcaactt ggaatcactg aaccaactat ccgctgtgat
      541 gatcggcgca ggcaggtgca aaccgcgctt gctcaaggcc aacaggcgcg catcgatcat
      601 ctcccgagcc cagctcagct tatcccggca aggtcctccc gcgccaatag ggtcgggccg
      661 ccgtacggtg aaatccaccg gcaccaccaa cttgccatca ccaatgacca cgaccagcaa
      721 aaggccatca atgcctgcga gtacccggtg ttgctgacca ctccaccaat gcccgactaa
      781 ccccagctgc tcgccatact tgtgcaaaac agagtcatcc acggcccagg tccactgcca
      841 tcggctttgg gtcgcttcgc ttttgccttc gacatgtcgc caaagcggca ccaacccctc
      901 aaggcccagg cgccgcagcc gcttgagcca ggagcgtttg ggcaaagcgt gcaacagacg
      961 cgaaggccag ttcttgtccc acccgcgcac ccgacagagc tccgagggcg tgcgacagcc
     1021 aaagagagcg ggaaacatga cacccacg
//
LOCUS       DASQSL010002222         2360 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_177695, whole genome shotgun sequence.
ACCESSION   DASQSL010002222 DASQSL010000000
VERSION     DASQSL010002222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2360
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177695"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1419)
                     /locus_tag="VE844_22285"
     CDS             complement(<1..1419)
                     /locus_tag="VE844_22285"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /protein_id="HZC03968.1"
                     /translation="MNPKTSAWSSRFVNRLLVQIGTFASLAIVCLALWVVYRTLQTIR
                     LADVVENFRALPASSVLLAFCFTAASYVVVTGFEVVALHHINRPLPYPRAALAGFLAA
                     AVGSNLGSAMITGGAIRYRIYSQAGLSALEIAGVTTLFALTVTLGIGFILTLAMLFGT
                     GETAGSVIHLRPEWRRTIGGFMLALMVAYITIAAIRPITIRTPSWSLQLPSAKTTLVQ
                     IALATIDLMLVGALIYVMLPAQTNFLAFLSVFVLALMAGGVSHVPGGIGVFESVMLLG
                     LPEVPPAALLGAILLFRCIYYLAPLSLAAVLLAIHEAALQRTRFKWARDTTTDWLAEI
                     GPQVMALVAVFSGVLLLFSGAVPAPSERLAWLQGWVPLAALEAAHIIASAAGLGLVVL
                     ARGLSLRLDPAYRLIIALLGIGAAALLLKGLIYEGALILGVVLAVLLIMHREFRRKAS
                     LFDQGFPPEWISTLMAILAVTVW"
     gene            complement(1460..2143)
                     /locus_tag="VE844_22290"
     CDS             complement(1460..2143)
                     /locus_tag="VE844_22290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008044775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HZC03969.1"
                     /translation="MRWLGVALIATCVVAFFALDLGGYLTLEYLQSQHAHIEAYYTAH
                     PCVTALAFSLIYTMTAGLSLPGSSLLPLLAGAVFGLFWGTVLVSVTSTIAATLEFLTA
                     RYLLRDAIQSRFSSNVLTFNAGIEKEGAYYLFALRLIPFAPFLIINLVMGLTPIKTLT
                     YIEVSLVGLLASSAVYVNVGTELGRLDSLSSLLSPSLIVSFTILGFFPLAAKKLLNLV
                     YSYRVSRGF"
     gene            2175..>2360
                     /locus_tag="VE844_22295"
     CDS             2175..>2360
                     /locus_tag="VE844_22295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004977151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HZC03970.1"
                     /translation="MARHSKTSRTPCDPLKHWDRRVSIAPMMDRTDRHCRYFLRLISR
                     HILLYTEMVPTGALIYGD"
BASE COUNT          628 a          659 c          673 g          400 t
ORIGIN      
        1 ccagaccgtt accgccaata tcgccatcaa ggtggatatc cattccggcg gaaacccctg
       61 gtcgaagagt gaagctttac gccgaaactc ccggtgcatg atcaacagca cggcgagaac
      121 cacaccaagg atcagggcgc cttcgtagat cagacctttc agtaacaagg cggcggcccc
      181 tatcccgagt agggcgatga tcaaacgata ggccggatcg agccgcagcg ataggccgcg
      241 ggcgagaacc acgagtccga ggcccgccgc actggcaatt atatgggcgg cttccagcgc
      301 cgccagcgga acccaaccct gtaaccacgc caggcgctca gaaggcgccg ggacagcacc
      361 cgagaacagg agcagcacgc cggaaaagac ggcgaccagg gccatcactt gcggcccgat
      421 ctccgccaac cagtcagtgg tcgtatcccg cgcccattta aaccgggtac gctgcagggc
      481 agcttcgtgg atggccaaaa ggacggcagc caggctgaga ggcgcgaggt aatagatgca
      541 gcggaacagt aaaatggcgc cgagcagcgc cgccggtggc acctccggga gtccgagcaa
      601 catcaccgac tcgaatacac cgatgccacc ggggacgtgg cttacgcctc cggccatcaa
      661 ggccaggacg aacacgctga gaaaggcgag gaagttcgtc tgtgcgggta acatcacgta
      721 gataagcgca ccgaccagca tcaaatcgat cgtggccagc gcgatctgca ctaaggtcgt
      781 tttggcggag ggaagctgaa gcgaccaact gggggtgcga atagttatgg ggcggatggc
      841 ggcaatcgtt atataagcca ccatcaaggc caacatgaat ccaccgatcg tgcgcctcca
      901 ctcgggccgc agatggatga cggatcctgc cgtttccccg gtcccaaaca gcatagccag
      961 ggtgaggata aagccgatgc cgagggtgac ggtcaacgcg aacagggtgg ttacacccgc
     1021 gatctcgagc gccgacagtc ctgcttggga atagatacgg tatcggatcg caccgcccgt
     1081 gatcattgcg gagcctagat tgctgccgac ggcagcagct aaaaagccag caagcgcggc
     1141 gcgcgggtag ggtagcgggc ggttgatgtg atgcagcgcc acaacctcaa agccggtcac
     1201 caccacataa ctcgcggctg tgaaacaaaa tgccagaagc accgatgagg caggcagcgc
     1261 gcgaaaattt tccactacat ccgcgagccg gattgtttgc aaggtgcggt atactaccca
     1321 cagcgccaga cagacgatcg caagacttgc gaaggtgccg atctgaacca gcagtctgtt
     1381 gacgaaccga ctcgaccaag cggaggtttt agggttcaac gcgctgccgg cactatccat
     1441 gatcgctcga acactgctgc tagaaacctc tagaaacccg gtagctataa acaaggttaa
     1501 gcaatttttt tgcagccagt gggaaaaaac ctagaatcgt aaatgaaacg attaaactgg
     1561 gcgataagag gctgctcagt gaatcgagtc tgccgagctc ggtgccgaca ttcacgtaaa
     1621 cggcagagct cgctaatagc cccactaagc tgacctcaat atacgtgagc gttttgatgg
     1681 gggtgagacc catcaccaga ttaatgatca aaaacggggc aaagggtata aggcgcaagg
     1741 caaaaagata ataagcgccc tccttttcta tacccgcgtt gaaggttagg acgttggagg
     1801 agaatctgct ctgtatggca tcccgcagca gatagcgtgc ggtaagaaat tcaagggttg
     1861 cggcgatggt cgaagtgacc gataccagca cggttcccca aaatagacca aagacagccc
     1921 cggctaagag cggcaaaagg ctggacccgg gtaaggataa gcccgccgtc atggtataaa
     1981 taagcgaaaa cgccagcgcg gtaacgcaag gatgcgccgt ataataagcc tcgatatgtg
     2041 cgtgctgcga ttgcaagtac tcaagcgtaa ggtagccgcc taaatcgagt gcgaagaacg
     2101 caaccacaca agtagcaatc agcgcaacac ctaaccatct catcttggtc attatagata
     2161 atatggtaat agtaatggcc cgccatagta aaacatctcg aaccccgtgt gatccattaa
     2221 aacactggga tcggcgcgtt tccatcgccc ccatgatgga tcggaccgat cggcactgcc
     2281 gctactttct gcggctgatc tcccggcata tcctgctcta taccgagatg gtgccaacgg
     2341 gcgccctaat ctacggcgat
//
LOCUS       DASQSL010002223         1093 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_205559, whole genome shotgun sequence.
ACCESSION   DASQSL010002223 DASQSL010000000
VERSION     DASQSL010002223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1093)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1093)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205559"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..372
                     /locus_tag="VE844_22300"
     CDS             <1..372
                     /locus_tag="VE844_22300"
                     /inference="COORDINATES: protein motif:HMM:NF024997.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HZC03971.1"
                     /translation="TAKDCLDTRLSIGFATHPPRVINVDQNAAYPPAFEALQQDGALS
                     PSCTLRPVAYLNNIIEQDHRFIKRRARYCLRFGSFRTAWRALRGFEVMHMIRKGQLRG
                     TKRGDIIAQNLIIATIFGIAA"
     gene            complement(616..>1093)
                     /locus_tag="VE844_22305"
     CDS             complement(616..>1093)
                     /locus_tag="VE844_22305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03972.1"
                     /translation="NEDHGPGGMMLESEPQYYAMQIALGNRAGLYSVMVDYFNRYMMP
                     IMVGETGTPYHHYGARWNQQLLLECARAVKDGIPFLGYTIYPLIDSWGWETALSVPKD
                     QTLLNPGGLITLDLEVRPFVERLLQSLSGPIQPCGPSDSCPELEVSGKAEPAGESL"
BASE COUNT          250 a          305 c          294 g          244 t
ORIGIN      
        1 acggcgaagg actgccttga taccagatta tcaataggat ttgcaacaca tccgccgcgc
       61 gtcattaatg tcgatcagaa tgcggcttat ccacctgcgt tcgaagcttt acaacaagac
      121 ggagcgcttt cgccatcctg cacgttacgg ccggtagcgt atctcaataa catcatcgag
      181 caagatcacc gattcattaa aaggcgtgca agatactgct tgaggtttgg ctctttccgt
      241 acggcttgga gggcccttag aggcttcgag gtaatgcaca tgattcgcaa agggcagctc
      301 cgtggtacca aaagaggaga tatcatcgcc caaaatctga tcattgccac tatctttgga
      361 attgctgcat gacgacgctc atcagcagca aacattttcg ttatccggaa ttcttgcaac
      421 acatccgact ctgcttggtg tgacgaagcg tgcatctcac atcggctcgg cgacgtctgg
      481 gtagccagaa caccgccaat aactcctgat gtgcattcgc ctgatgtcct tctctactca
      541 ggcaacggaa attcgtattg gtcgggttct acccgctcac gcaaacgggc ggagatgccc
      601 aacagcattg gaagtttaca gggattcgcc ggccggctcc gccttgccgg acacttccag
      661 ttccggacat gagtcggacg ggccacacgg ctgaatcggc cctgaaagcg actggagcaa
      721 gcgctcgaca aacggtctaa cctccagatc caaggtgatc agcccgccgg gattgagcag
      781 cgtctggtcc ttgggaacgg acagggcggt ttcccagccc cagctgtcga tcagcggata
      841 gatcgtatag cccaggaatg gtatgccgtc cttcacggct cgagcgcatt ccagcaggag
      901 ctgctggttc cagcgcgcgc cgtaatggtg gtatggcgtg ccggtttcac cgaccatgat
      961 cggcatcatg tagcggttga agtaatcaac catcacggaa tagagaccgg cacggtttcc
     1021 cagcgcgatt tgcatggcgt aatattgcgg ttccgactcc aacatcatgc cgccggggcc
     1081 atggtcttcg ttg
//
LOCUS       DASQSL010002224         1333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_205662, whole genome shotgun sequence.
ACCESSION   DASQSL010002224 DASQSL010000000
VERSION     DASQSL010002224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1333
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205662"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(184..339)
                     /locus_tag="VE844_22310"
     CDS             complement(184..339)
                     /locus_tag="VE844_22310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03973.1"
                     /translation="MLWRGVWPDRPPCPVRLIVVVVPGLRLKPWYLLTTDLALAPIET
                     VRAYSGR"
     gene            complement(349..1158)
                     /locus_tag="VE844_22315"
     CDS             complement(349..1158)
                     /locus_tag="VE844_22315"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03974.1"
                     /translation="MDSLPPVLLDLISTFRPLLRAEVFESFTYLLCGLLIGEAKHGTV
                     RASVFAPAAYQPQRLSDLFCRHKLSRQALMAQLTEQVLTILYPSGLPARLFWLADSTL
                     TEKPFVRRVASVGLFHRAKRIVGRAKHLQGQCYVFAAPLYQTAQRQWASALVGALLYV
                     KGRSIPQLVGDLAQQLRLPALVRQVWVVDRGIASRPLVQSLDRLGQYILGRVRSNQVF
                     YFAPRRQPKRGRPRSYGQKCRVDRLVKRFPERLQHQSTTLKIRGKERTVRV"
BASE COUNT          310 a          406 c          375 g          242 t
ORIGIN      
        1 cagtctgtac cacgaccagt tgagggaagg caactcgacg ggcaacgctt gggtggctat
       61 caacttcaaa agcgtttgga cgatgcacaa gaagatcggc cagcagcgta cgccttcgcc
      121 actgcgccct tgataatgcc ctaagcccaa ctctttgacc tcatcaaagt tgacttcgat
      181 ttgttagcgt ccgctataag cccgcaccgt ctctatgggg gcgagtgcta agtcggtggt
      241 cagcagatac cacggtttta acctcagccc cggtacgacc acgacgatca ggcgcacggg
      301 gcaagggggg cggtctggcc acacgccgcg ccatagcatc tcggcgtcct aaacacgcac
      361 ggtgcgctcc ttcccccgta ttttcagggt ggtgctctgg tgctgcaacc gctcaggaaa
      421 acgcttcacc aaccggtcca cacggcactt ctgtccataa cttcgaggcc ggccccgctt
      481 gggttgacgg cgcggcgcga agtagaagac ctgatttgaa cgcacgcgtc ccaggatata
      541 ctggcctagg cggtccaagg actggactaa gggacgactg gcgatgcccc gatcgaccac
      601 ccacacctgc cgcaccagcg cgggcagacg caactgctgg gcgaggtccc ccaccaactg
      661 tgggatggac cgtcctttga catagagcaa ggcgccaacc agggcgctgg cccactgccg
      721 ctgcgccgtc tggtataagg gggccgcaaa gacgtaacac tggccttgca ggtgcttggc
      781 ccgcccgaca atgcgcttgg cacggtggaa tagacccacc gaggccaccc gccggacaaa
      841 cggcttctcg gtcaaggtcg aatcggccag ccaaaacagg cgtgccggca agccgctcgg
      901 gtacagtata gtcaacactt gttcggtcaa ctgagccatc agcgcttgcc gcgagagctt
      961 atggcggcag aatagatccg acaagcgctg gggctgataa gcggcgggcg caaagacgct
     1021 tgcccgcacc gtgccgtgct tggcttcgcc aatcagcaga ccgcatagca agtaggtaaa
     1081 actctcaaaa acctccgccc gcaatagcgg gcggaacgta gagatgagat caagcagaac
     1141 cggtggtaag ctgtccatca gtcgtttctc ccgttgtgat tgattacatc accgatgaac
     1201 gactgagacg cagagggcaa gatctctgcg ccgcttattt atctcaaaaa ccgggaacta
     1261 cagttcatat aaaggccact cttgcaaagg agcactcaca ctatcccaat gcaaaatcat
     1321 cgtggctttc aga
//
LOCUS       DASQSL010002225         2658 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_177812, whole genome shotgun sequence.
ACCESSION   DASQSL010002225 DASQSL010000000
VERSION     DASQSL010002225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2658
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177812"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            243..386
                     /locus_tag="VE844_22320"
                     /pseudo
     CDS             243..386
                     /locus_tag="VE844_22320"
                     /inference="COORDINATES: protein motif:HMM:NF023410.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="exosortase-associated EpsI family protein"
     gene            complement(383..1735)
                     /locus_tag="VE844_22325"
     CDS             complement(383..1735)
                     /locus_tag="VE844_22325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003389045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HZC03975.1"
                     /translation="MTQGQPPGLALLFVTEMWERFSYYGMRALLVLFLIGETDRGGLG
                     WSTQAASQLYGWYTGLVYLTPIIGGYLADRYLGTHRALVIGGAVIALGHFSLALESLS
                     GFYAGLILLILGTGFFKPNVSTMVGQLYELHDPRRDAGFTIFYMGINLGALLGPLICG
                     YLGQSEQFGWRYGFAAAGIGMVLGLLVYLFGKKRYLGSIGDVSLRQSGHDPADNQPLS
                     REERHRIAALLIMAFFVIFFWLAFEQAGSSMTLFAERSTDRTTPAWLGWLITEPSFPT
                     AWFQAVNPAFILLLAPFFSLLWQRLGARNLELHTPLKMALGLWLLGSGFLVLVLGTYW
                     SDRGLLVSPLWLIGAYFLHTCGELCLSPVGLSLVTRLAPLKFASMLMGMWFLANFAAN
                     LLAGYLAGMLEAVEQGEVFHILGGQADFFLIFVLSSIGAGGLLILLGPLLNRLMHGRA
                     "
     gene            complement(1746..2561)
                     /gene="mutM"
                     /locus_tag="VE844_22330"
     CDS             complement(1746..2561)
                     /gene="mutM"
                     /locus_tag="VE844_22330"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011787153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HZC03976.1"
                     /translation="MPELPEIETIRRGITPYLLGQTIAQVVIREQRLRWPIPAKLYTA
                     LPGQTVRAVIRRGKYLLVETEGGWIILHLGMSGSLRILPAATPAQRHDHVDLVLTDQT
                     CVRLRDPRRFGALLWTSESPSKHPLLAPLGPEPWDPEFNGEYLYRRAQRKVRAVKSFI
                     MDGRTVVGIGNIYANESLFVSGIHPAREAGRISLERYKRLTEAIRQVLDEAIDQGGTT
                     LRDFVDSQGVPGYFAGRLKVYNRLDAPCVRCNVPVRHRRLDQRSTYYCSYCQR"
BASE COUNT          702 a          729 c          721 g          506 t
ORIGIN      
        1 tatgttatat gaagggggtg ggagaaagtc ttcttctcga atagaatcca acatactcaa
       61 agtttacagg ttacgaaaat tgattcattc tctatatcgt aaattcaatg ggttacgact
      121 tacgtggaga tatttcgggt aaattccatg atctttagtc aagagccata attcgttgaa
      181 aattcaaggc aaataatgtt tcggctcgtc aaacctgtaa actttgagta ttttgggatg
      241 ccttaacccg taaccgcagt gacggggcgc tcgtgcggct ggtaacccct ttaaaacccg
      301 gagaggattg gagtgatgcg gatggccgcc ttcatgcctt cgctaaaatc gccgttccag
      361 cgctgcaggc gtatattccc gattaggcgc gcccatgcat cagccggttg aggagaggcc
      421 ctaacaggat aagcagacct ccggccccta tggagcttaa cacaaagatc aggaaaaaat
      481 ctgcctgacc ccccaagatg tgaaacacct cgccctgctc tacagcctcc agcatcccgg
      541 caagatagcc cgccaaaagg ttcgcagcga aattcgcaag aaaccacatc cccatgagca
      601 tagaggcgaa tttgagcggg gcgagacgag taaccaggga gaggccgacc ggggagaggc
      661 ataactcacc acaggtgtgc aggaaatagg caccgataag ccataaggga ctgaccaata
      721 gaccccggtc gctccaataa gtgcctagca ccagcaccaa aaatccgctg ccgagcaacc
      781 agagtcccag cgccatcttg agcggcgtat ggagctctaa gttgcgtgcg cccagacgct
      841 gccagagtag agagaaaaag ggtgcgagca ggaggataaa ggccggattg accgcctgaa
      901 accaggctgt gggaaaggag ggctcggtga tcagccagcc taaccaagcc ggtgtggtgc
      961 ggtcggtgct gcgctcggcg aagagcgtca tcgaggagcc ggcctgctcg aaggccaacc
     1021 aaaagaagat cacgaaaaag gccatgatca gaagtgcggc gatccgatgc ctctcttcgc
     1081 ggctgagtgg ctgattgtct gctggatcat ggccagactg tcgtagagac acatcgccga
     1141 tgctgccaag atatctcttt ttaccgaaga gatagacgag caggcccaac accataccga
     1201 tcccggctgc ggcaaacccg tagcgccagc caaactgctc gctttggcca agataaccgc
     1261 agatcagtgg acccagcaaa gcgccgagat tgatacccat atagaagata gtaaaacctg
     1321 catcgcgccg gggatcatgc agttcataga gttggcccac catggtcgag acgttgggtt
     1381 tgaagaagcc agtgccgaga atgagcaaga tcagtccagc ataaaagccg gacaaactct
     1441 ccaaagccag ggaaaagtgt ccaagcgcaa tcaccgcccc gccgatcacc agcgcccgat
     1501 gggtgccgag gtaacgatcc gctagataac cgccgatgat cggcgtgaga taaaccaatc
     1561 ccgtgtacca accataaagt tggctcgccg cctgggtaga ccaacccaag ccaccgcgat
     1621 cggtctcgcc gatcagaaac aacaccaaaa gcgcgcgcat tccataatag gagaagcgct
     1681 cccacatctc ggtcacaaac aaaagtgcaa gtccaggcgg ctggccctgg gtcatagcca
     1741 aagcttcatc gttggcagta tgaacaataa taggtagaac gctgatccag ccgccgatgt
     1801 cttacgggca cattacagcg gacacagggg gcatcaagcc ggttataaac cttaagacgc
     1861 cctgcaaagt agccggggac gccctggcta tccacaaagt cccgcaaggt cgtaccgcct
     1921 tgatctatgg cttcatccaa cacctgtcga atggcttcag tcaagcgctt atagcgttcc
     1981 aaagagatac ggccggcctc gcgggccgga tggataccgc tcacaaataa ggattcattg
     2041 gcgtagatgt taccgatgcc aaccacggta cggccatcca tgataaagga ctttactgcc
     2101 ctcaccttcc tctgtgcacg ccggtagaga tactcaccat taaactcagg atcccagggc
     2161 tccggtccca gcggagccag caggggatgt ttggaggggg actcggaggt ccatagcaaa
     2221 gcaccgaagc ggcgtggatc gcggagccgc acgcaggttt gatcggtcag cacaagatcc
     2281 acatggtcat gcctttgcgc cggtgtagcg gcaggcaaga tgcgtaagct gcctgacatg
     2341 ccaagatgca gaatgatcca gccaccctct gtctccacca gcaaatactt tccgcgccgg
     2401 atcacggcac gtaccgtctg tccgggcaat gctgtgtaga gcttagcggg gatgggccaa
     2461 cgcaggcgct gctcacggat caccacctga gcgattgtct ggccaagcaa gtaaggagta
     2521 ataccgcggc ggatggtctc gatctcgggg agctcaggca taatctagga cattatggaa
     2581 tgacccttaa cggatctatc tgattcgccg tggttttttg cttcttcgag tttcagtaga
     2641 cgcctacctg tctcagca
//
LOCUS       DASQSL010002226         1358 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_177860, whole genome shotgun sequence.
ACCESSION   DASQSL010002226 DASQSL010000000
VERSION     DASQSL010002226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1358
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177860"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            86..1218
                     /locus_tag="VE844_22335"
     CDS             join(86..515,515..1218)
                     /locus_tag="VE844_22335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611351.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HZC03977.1"
                     /translation="MNNNYIVRLSDEERAQLTELTRKGHAAAYKIRHAHILLKADADG
                     PAWTDTKIAESFSVSVNAVLGVRQRWVEQGLEAALNRKKRQHPSRTPRLDGEGEARLI
                     ALRCGEPPAGHARWTLRLLADQAVALDIVEAISHETVRQALKKNALKPHLRKMWGIPP
                     AQSGAFVAHMEDILELYHTPYDPQVPMVCMDEQPVQLIKDTRKPLPAEPGQAERYDYE
                     YERNGTATIFMFTEPLRGVRTVSVREHKTAIDWATEVQHLLDTRYPEADRIRLVCDNL
                     TTRGLGSLYEAFPPEQARALAARLEIHHTPKHGSWLNIAESELSALTLQCLDRRLPDI
                     ETLREETTQWEERRNTSQKGVDWQFATQDARIKLKRLYPQIQN"
BASE COUNT          323 a          387 c          388 g          260 t
ORIGIN      
        1 ctagtgtctg gtcagccttg tttttagagg ttcaagggtt atgatgccgt ctgagagcag
       61 aaggtgtgat cagacggagt gcgccatgaa caacaactac atcgtacgtc tttccgacga
      121 ggaacgcgcc cagttgacag agctgaccag aaaagggcac gccgccgcat acaagatccg
      181 acacgcccac atcttgttga aagccgatgc ggatgggcct gcctggacgg ataccaagat
      241 cgctgagagc ttctccgtga gtgtcaatgc cgtgcttggc gtcagacaac gttgggtcga
      301 acaggggctg gaggccgcgc tcaaccggaa gaaacggcag cacccctccc gcacgccgcg
      361 cttggatggc gagggggagg caagactgat cgcgctcagg tgcggtgagc cgcccgccgg
      421 gcatgcccgc tggaccctgc ggctcctggc agaccaggct gtggctttgg acattgtgga
      481 ggcgatcagc catgagacgg tcaggcaagc actcaaaaaa acgccttgaa accacatctg
      541 cggaagatgt ggggcattcc gcccgcgcag agtggggcgt ttgtggcgca tatggaagat
      601 atcttggagc tctatcatac accgtatgat ccccaggtcc ccatggtgtg catggatgaa
      661 caacccgtgc agttgatcaa ggacaccagg aagccgctgc cagcggaacc aggccaagcc
      721 gagcgctatg actatgaata cgagcgtaac ggcactgcca ctatcttcat gttcaccgaa
      781 ccattgcgcg gcgtccgcac tgtcagtgtc cgagagcaca agacggccat tgactgggcc
      841 actgaagtcc aacatcttct ggatacccgg tacccggagg ccgatcgtat ccggctggtc
      901 tgtgataacc tcacgacgcg tgggctgggc tcgctctatg aggccttccc acccgagcag
      961 gcccgcgcac tggccgcacg gctggagatt caccataccc ccaagcatgg cagttggctc
     1021 aatatcgccg agagcgaact gagtgccctg accctacaat gtctggatcg gcggctccca
     1081 gatattgaga ccctcagaga ggaaacaacg cagtgggaag agcggcgcaa tacgtcccaa
     1141 aaaggtgttg actggcagtt tgctacacag gatgccagaa tcaaactcaa acgcctttac
     1201 ccacaaattc aaaactgaca ggggactagt gcttcggccc aacacgcaca agagctgagt
     1261 aatttcggat tgacagcttt tcaggtagca agctatacag ctgtctgtca agcttgacat
     1321 ctttacatcc agctgtcact tccaagcctg ttcacttt
//
LOCUS       DASQSL010002227         1123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_205756, whole genome shotgun sequence.
ACCESSION   DASQSL010002227 DASQSL010000000
VERSION     DASQSL010002227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205756"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..518)
                     /locus_tag="VE844_22340"
     CDS             complement(<1..518)
                     /locus_tag="VE844_22340"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HZC03978.1"
                     /translation="MNSMLWRASYRFLLHHPWQLGLAILGIALGVAIIVAVDLARASA
                     KAAFERSTEAVVGKATHRIIGGPEGLDESLYVQLRVREDVRPLAPVIEGHATLPTLPG
                     ETLQLLCIDPFAEASFRDYWEALRADANSGIDVGDLVAMPGAVAVSEATRERLGLKPG
                     STFTIRTGRVER"
     gene            complement(515..>1123)
                     /locus_tag="VE844_22345"
     CDS             complement(515..>1123)
                     /locus_tag="VE844_22345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HZC03979.1"
                     /translation="LRDINAVIQAGEFVVLLGRSGSGKSTFLNLLSGIDLPTSGEIAF
                     NGIALNRLSEEERTLFRRRYIGFIFQSFNLIPTLTVEENCLLPLELNGTTGHPAQKRC
                     SIVLEQLGLGARAGSFPDRLSGGEQQRVAIGRALVHDPQVVLADEPTGDLDLETGREV
                     LDLLDRITRATGKTLIMVTHSREVMGLADRILTIKQGKIIEQ"
BASE COUNT          238 a          357 c          319 g          209 t
ORIGIN      
        1 ctgcgctcta cccggcctgt gcggatggta aacgtgctgc cgggtttgag acccaaccgc
       61 tctctagtcg cctcgctgac cgcaacggcc cctggcattg cgaccagatc acctacatcg
      121 atgccgctat tggcgtccgc tcttaacgct tcccagtaat cacggaacga ggcttccgca
      181 aaggggtcta tgcacagcag ctgaagcgtc tcgcctggca aggtaggcag ggtagcatgg
      241 ccctcgatca ccggcgcgag tggacgcacg tcttctcgaa cccgcaactg cacatacagc
      301 gactcatcga gcccctccgg gccgccgata atgcgatggg tggccttgcc caccacggcc
      361 tcggttgagc gttcgaaggc cgctttggca ctggctctag cgagatccac cgcaacgata
      421 atggcaacgc caagggcaat gcccaggata gccagaccca actgccaggg atgatgcagc
      481 aaaaaacggt agcttgcgcg ccaaagcatc gaattcattg ttcgatgatc ttgccctgct
      541 taatcgtcaa gatccgatca gccagcccca tcacctcacg gctgtgggtc accataatca
      601 gggtcttgcc ggtggcgcgc gtgatccgat cgagcaggtc caggacctcg cgtccggtct
      661 cgagatcgag atccccggtc ggttcatcgg ccagcactac ttgcggatcg tgcactaggg
      721 cacggccgat ggcgacgcgc tgctgttcgc cgccagaaag ccgatccggg aaactccccg
      781 cccgcgcccc aagcccgagt tgctcgagca cgatcgagca gcgtttttgg gccggatggc
      841 ctgtcgtgcc gttgagctcg agcggcaaaa ggcaattttc ctccacggtg agggtgggga
      901 tcagattgaa ggactggaag ataaaaccga tataacggcg ccggaacagg gtacgctcct
      961 cctccgagag cctgttgagc gcaataccat taaacgcgat ctctccactc gtcggcagat
     1021 cgatcccgct cagcaggttt aaaaatgtcg atttacccga gccactgcgt ccgagcagca
     1081 ccacaaactc accggcctgg ataacggcgt tgatatcgcg cag
//
LOCUS       DASQSL010002228         1100 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_177906, whole genome shotgun sequence.
ACCESSION   DASQSL010002228 DASQSL010000000
VERSION     DASQSL010002228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177906"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..617)
                     /locus_tag="VE844_22350"
     CDS             complement(<1..617)
                     /locus_tag="VE844_22350"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HZC03980.1"
                     /translation="MIKTFSTLYAGHVDFEDMGQHATPVNERRYSNEHLVSVFDKTQA
                     MAQLMDELGYDILWYAEHHFQREGYEVIPNLLMLSVHLAHVTERLRFGCGFNITPMWH
                     PLRLAEDFAMADILTNGRVVFGVGRGYHTREVETLGGPLLDAEANREIFEEQVEIIFK
                     AFNEESFSHQGKYYTIPPHVPYRGYELKELTLVPRPPKRPVECWQP"
     gene            complement(751..1011)
                     /locus_tag="VE844_22355"
     CDS             complement(751..1011)
                     /locus_tag="VE844_22355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014434316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HZC03981.1"
                     /translation="MNEPIQPAKILDVRGEQCPYPLIKARQEVLTLNTGEILKVLATD
                     RNSLSDIQGWAKSAKAVRLLRQDTETDEQGRELYVHYLAREA"
BASE COUNT          200 a          310 c          336 g          254 t
ORIGIN      
        1 ggctgccagc attcgaccgg gcgcttcggg ggccgcggga ccagggtgag ctctttgagc
       61 tcatagccgc ggtaggggac gtgagggggg atggtgtaat acttcccttg gtgggaaaat
      121 gattcttcgt taaaggcttt gaaaatgatc tcgacctgct cttcgaagat ctcgcggttg
      181 gcctcggcgt cgagcagtgg cccccccagc gtttccacct cgcgcgtatg gtagccgcgc
      241 ccgaccccga agacgacccg tccgttggtg aggatatcgg ccatggcgaa atcttcagcg
      301 agtcgcaagg gatgccacat aggggtgatg ttaaaaccgc agccgaacct cagtcgctcg
      361 gtcacgtggg ccaggtgcac gctcagcatc aggaggttcg ggatcacttc atagccttcg
      421 cgttggaagt gatgctcggc ataccatagt atgtcatacc ctaactcatc catgagttgc
      481 gccatggcct gggtcttgtc gaagacgctg acgaggtgct cgttcgaata ccggcgctcg
      541 ttgacagggg tggcgtgctg gcccatatcc tcaaaatcga catggccggc gtacagcgtt
      601 gagaatgttt tgatcatgaa taggtctcct cgtgggtgtc gcggcttgca tccctgtcat
      661 catgcaccgg cgctccgtat accggccagc gaccgtcggg tggtccgtcg acaagcctcg
      721 acgcctcacc gatctgctga tgtaggcgtg ttacgcctcg cgcgccaagt agtgcacgta
      781 aagctcgcgc ccttgctcgt ccgtttcggt gtcctggcgc aggagacgga ccgctttcgc
      841 cgattttgcc cagccctgaa tgtcgctaag ggagttacgg tcagtcgcta agaccttaag
      901 gatttccccg gtgttcagcg tgagcacttc ttgccgggct ttaatcaggg gatatgggca
      961 ctgctcacca cgcacatcca ggattttggc gggctgaatg ggttcgttca tataccctat
     1021 ctcctgagtc gcatgactat tttgggacag ctcttgtgag cggcggaacg cggtctgccg
     1081 tgattggcac acgctcagcc
//
LOCUS       DASQSL010002229         1255 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_177959, whole genome shotgun sequence.
ACCESSION   DASQSL010002229 DASQSL010000000
VERSION     DASQSL010002229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1255
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177959"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            234..1160
                     /locus_tag="VE844_22360"
     CDS             234..1160
                     /locus_tag="VE844_22360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012873275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03982.1"
                     /translation="MVDVDTFLTILYVMADDFFKTTLPPESYPGPQAALSRSEVVTLA
                     LFGQWQSFGSERGFYRYAQRHLRAAFPSLPTREQFNRQVRQQHAALVAFCLHLVRLLA
                     AQRCAYEALDSSGVPTRDAKRRGAGWLPGLADIGWSNRLGWYEGFHVLLAVNPWGMIT
                     GFGFGPASTPDQPLAETFFALRRHPHPALASVGSPACGPYVVDKGFEGQANHQLWWRA
                     YGAQVLCPPKRNSRMPWAQGRRRWLAGVRQIVETVYEKLWHTFRLDRERPHDLSGFQA
                     RLAAKIALHNFCIWLNEQLGRPRLAFADLVAW"
BASE COUNT          237 a          387 c          365 g          266 t
ORIGIN      
        1 agctcgcaga agttcggctg tcacggattt cctacggtgc gcaggcttcc cgtattcctc
       61 catgacagcc gaacttctac tcgctggtat gcgagcaaga aaggacaggg aaaggaggtg
      121 atgagcgaag tgaacattaa aacgcttggt gtgagttgac aatagatggc tgaacggaag
      181 gcgcctctag ccgtagaatg gctccatctt cccccagata aggagcaaat gctatggtcg
      241 atgtggacac cttcctgacc atcctttacg ttatggcaga cgactttttc aagaccactt
      301 tgccccccga gtcctacccg ggaccccagg ccgccctgag ccggagcgag gttgtgacct
      361 tggccctgtt cgggcagtgg cagagttttg gcagtgagcg gggcttttac cgctatgccc
      421 agcgtcatct ccgggccgcc tttccgtctc tgcccacccg ggagcagttc aaccggcaag
      481 tccgccagca gcacgcggcc ctcgtggcat tttgtctgca tctggtccgg cttttggccg
      541 cccagcgctg tgcctatgaa gccctcgata gctccggcgt tcccacccgg gatgccaagc
      601 gccgaggcgc cggatggctg ccaggactgg ccgacattgg ctggagcaac cggctgggct
      661 ggtatgaagg cttccatgtg ctcctggcgg tcaacccatg gggcatgatc accggcttcg
      721 gctttggtcc agccagtacc ccagatcaac ccttggcgga gacgtttttt gcccttcgcc
      781 gccatcccca cccggctctg gcaagcgtgg gctccccggc ctgtgggccg tatgtcgtcg
      841 acaagggctt cgaggggcaa gccaaccacc agctttggtg gagggcctat ggtgcccagg
      901 tcctctgccc tccgaagcgc aatagccgca tgccttgggc ccaggggcgg cgacgctggc
      961 tggcgggagt acgccagatt gtggagaccg tgtatgaaaa gctctggcat accttccgcc
     1021 tcgaccgcga acggccccat gacctcagcg gatttcaggc gcgcttggcc gcaaaaatcg
     1081 ccctgcataa tttttgtatc tggctcaatg agcaactcgg cagaccacgc cttgcttttg
     1141 cggacttggt ggcctggtaa cctcagggaa tttcacacca agcgtttaaa tctcaggcca
     1201 cgtggcggca tacacgcgac atcgtacaga ttatcttcca aagcatctcc acgtt
//
LOCUS       DASQSL010002230         1041 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_178026, whole genome shotgun sequence.
ACCESSION   DASQSL010002230 DASQSL010000000
VERSION     DASQSL010002230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178026"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            532..>1041
                     /locus_tag="VE844_22365"
     CDS             532..>1041
                     /locus_tag="VE844_22365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002706484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HZC03983.1"
                     /translation="MTIYAYLRVSTDKQDVDNQRHGLLEYANSHKLVPLEFREDTVSS
                     KIRWRERGIGKILGGARAGDVILAAEVSRLARSTLQVLEILEFAAEKELSVHIVKNRM
                     VMDDSLPSRITATVLGLAAEIEREFISARTVEALARRKAQGLPLGRPKGAKAKKVKLD
                     EYRETIVSYL"
BASE COUNT          234 a          267 c          314 g          226 t
ORIGIN      
        1 ttctagcgcc tggtcgagcg tttcgaccgt gcgtgccgtt gcggcggtgc cggtgcggga
       61 gttcacgcgg tactcaccag gcaagcgcgt gaccgtgatc ccgaggctgc gcagctcggc
      121 ggcggtaagc tcgaaacggg acagggcagg ggggtcgccg gtcatgtcat cggcttgcgc
      181 cggatcggcg cgtcactcga acgctaggcc cagccccact gtccggtaaa ggatggtttt
      241 ccggacaaaa tcgaaaaccc atgaaaacaa tggcttgcgt gtccggtaat ttaggccgaa
      301 aatgcttccc atgtgcggcc cgtacgtcgc tgttgtttgg gaccttcatc cttatgtcca
      361 atgttggccg gtcacagtgg gccgcgaagc cgcgccgcgc caaacaggca ggggcctttt
      421 tgagtatcta caaaatgaac gtttatacgc tatgaatatt tacttttgga tattatttat
      481 tatggatatt atttatatta attaagcttt taataggctt tgttctgaaa aatgaccatc
      541 tacgcctatc tccgggtatc cactgataag caggacgtag acaaccagcg ccatgggctt
      601 ttggagtacg cgaacagcca taagctcgtg cccctggaat tccgggaaga cacggtaagc
      661 agcaaaatcc gctggcgaga acgggggatc gggaaaatcc tgggaggagc ccgggcggga
      721 gatgtcatcc tggccgccga ggtctcaagg cttgcccgct ccacgcttca ggttctggag
      781 atcctagaat ttgctgccga gaaggaactc agcgttcaca tcgtcaaaaa ccgcatggtg
      841 atggacgact cccttccaag ccgcattaca gctacagtgc tagggctggc tgctgagatc
      901 gagcgggagt tcatctccgc ccggacagtg gaagctctgg cgaggcggaa agcgcaagga
      961 ttgcctttag ggcggcccaa gggagccaag gccaagaagg tgaagctcga tgagtatcgg
     1021 gagacgattg tcagctactt g
//
LOCUS       DASQSL010002231         1135 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_205912, whole genome shotgun sequence.
ACCESSION   DASQSL010002231 DASQSL010000000
VERSION     DASQSL010002231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1135
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205912"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..649
                     /locus_tag="VE844_22370"
     CDS             <1..649
                     /locus_tag="VE844_22370"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03984.1"
                     /translation="HYTTVYRVFARWSDDGSLEQAFIASVAHLSVHNQLDLSILHGDG
                     TNTVAKKGGDGIGYSSHKHQKGEKVIAIVDNHGYILAPLPVAPVNEADTVLLPDGLKA
                     LKRIGKQTGLSFEGAYLNLDGGFDSASNRKAIFNAGLIPNVKEKPRNRKRPKRGRKRL
                     FDQAVHDLRDRVERMFAWEDKFKRLLLRFEHLQRRHYAMKLMAYTLINLRRFCAT"
     gene            777..>1135
                     /locus_tag="VE844_22375"
     CDS             777..>1135
                     /locus_tag="VE844_22375"
                     /inference="COORDINATES: protein motif:HMM:NF024736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03985.1"
                     /translation="MPAKKPATTPIPVQLSETEFTEFIFPHLSMPKRAPKCKLSYHHV
                     FNLILWVLYTGMQWKCLPVPKTPDGTNAIHYTTVYRVFARWSDDGSLEQAFIASVAHL
                     SVHNQLDLSILHGDGTNT"
BASE COUNT          275 a          335 c          280 g          245 t
ORIGIN      
        1 ccactacacc acggtctata gagtctttgc ccgctggtcc gacgacggtt cactcgagca
       61 ggcctttatc gccagtgtgg cgcatctgtc ggtgcacaac cagctcgatc tcagcattct
      121 gcatggcgac ggcactaaca cggtagccaa aaagggcggg gacggcattg ggtattccag
      181 ccacaagcat caaaagggcg aaaaagtcat cgccatcgtc gacaaccacg gttacattct
      241 ggccccgctt cccgtcgcac ccgtcaatga agccgatacg gtgctgttgc ctgatgggtt
      301 aaaggccttg aagcggatcg gcaagcagac gggattgagc ttcgaggggg cgtatctcaa
      361 cctcgacggc gggtttgact cggcgtctaa tcgcaaagcg atcttcaacg ccggtttgat
      421 tcccaacgtc aaagagaagc cgcgcaaccg caagcgtccc aaacgcggtc gcaagcggct
      481 gttcgaccag gcggttcacg acttacgaga ccgtgtggaa cggatgtttg cctgggaaga
      541 caaattcaag cggttgttgc tgagatttga gcacctgcaa cgtcggcact acgccatgaa
      601 actgatggcc tacacgctca tcaatttgag gcggttttgt gcgacctaaa acctgcaacg
      661 agttctttga actggttgca agtttcacca attggcctaa tgcattatga tatttgaaga
      721 taaccgttct taggaacgat cctgaatatc ttcaaataag gccatcgatc gtgcccatgc
      781 cagccaaaaa gcccgctacc acgcccattc ccgtacaact gtcagaaaca gagttcaccg
      841 aatttatctt cccgcacctc tccatgccca aacgggctcc caagtgcaaa ctcagctatc
      901 accacgtctt caacctcatc ttatgggtcc tctacaccgg tatgcaatgg aagtgtctgc
      961 cggtaccaaa aacgcccgac ggtaccaatg ccatccacta caccacggtc tatagagtct
     1021 ttgcccgctg gtccgacgac ggttcactcg agcaggcctt tatcgccagt gtggcgcatc
     1081 tgtcggtgca caaccagctc gatctcagca ttctgcatgg cgacggcact aacac
//
LOCUS       DASQSL010002232         1000 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_178070, whole genome shotgun sequence.
ACCESSION   DASQSL010002232 DASQSL010000000
VERSION     DASQSL010002232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178070"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            276..>1000
                     /locus_tag="VE844_22380"
     CDS             276..>1000
                     /locus_tag="VE844_22380"
                     /inference="COORDINATES: protein motif:HMM:NF017416.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HZC03986.1"
                     /translation="MSEHGGKTYRPWEPERYQQGAYSPAAKLSEGDLVFFLLETVPRL
                     DLSRFYAPYETERRGAPPYDPAMMSCLLIYAYCVGVFTSRKIALACERNLAFIAMVGD
                     ERPDFRTISDFRKDHLEVFIELFVQVLRLAKEAGMVKLGNVSTDGTKLQGNASRHQAM
                     SYGYMKKEVERLREAIEALVTQAVQQDEADDAALGSRRGDALPAELERREQRLAAIEA
                     AMQRLEEQAKAEAEAERKRRAEA"
BASE COUNT          220 a          259 c          322 g          199 t
ORIGIN      
        1 agggatgaga tggcgttttt tgaaaggtcc agcccctctg aaaggcggtc tcgtgcagcc
       61 tcgacgcagt ctggggtcga ttaggagcaa agtcaacata ccgtctccag actccaataa
      121 tcggctgtca taattctcgg acagcctcct aggaggctgt ctgagaaaca atcggtccaa
      181 ctcatcgggt caacattgcc catctgaaga tggtaggtga taatatcatt tcctcttgat
      241 acggcctcga tcacactgcc aagtggggag caataatgag tgagcacggt ggcaaaacgt
      301 atcgtccatg ggaacccgag cgttatcagc agggtgccta tagcccggcg gccaagctgt
      361 ccgaagggga cctggtcttc tttctactcg aaaccgtgcc ccgcttggat ttgagtcgct
      421 tctatgctcc ctatgagacg gaaaggcgag gcgctccgcc ctacgatccg gccatgatga
      481 gctgtctgct gatctatgcc tactgtgtgg gggtgtttac cagccgtaaa atcgccttgg
      541 cctgtgagcg gaatttggcg tttatcgcca tggtgggtga tgagcgcccg gacttccgca
      601 ccatcagtga tttccgcaag gaccacctcg aagtgttcat cgagctcttt gtccaagttc
      661 tgcgcctggc caaggaagcg gggatggtga agctgggcaa tgtgtcgacg gatgggacga
      721 aactccaggg caacgcgtcg cgtcaccaag cgatgagcta cggctatatg aagaaggaag
      781 tggagcggct gcgcgaggcc attgaggcgt tggtgacgca ggcggttcaa caggacgagg
      841 cggatgacgc cgccttgggt agccgccgag gcgatgcatt accggcggag ctggagcgcc
      901 gcgagcagcg cttggccgcg atcgaagcgg cgatgcagcg gttggaagag caggccaagg
      961 ccgaagcgga agccgagcga aagcgccgag cggaagcgga
//
LOCUS       DASQSL010002233         1358 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_178124, whole genome shotgun sequence.
ACCESSION   DASQSL010002233 DASQSL010000000
VERSION     DASQSL010002233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1358
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178124"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..877)
                     /locus_tag="VE844_22385"
     CDS             complement(<1..877)
                     /locus_tag="VE844_22385"
                     /inference="COORDINATES: protein motif:HMM:NF015557.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HZC03987.1"
                     /translation="MNLAWISLGALVVAVVVGIICRVNVGLLSFAAAFVVGTGFGNLR
                     VSQVTVGFPTQLFLVLVAILLLFGQAQVNGTLNKLARHSIRLARGNIGMVPILFFGLS
                     VAIATLGGGNITAIALIAPVAMAAAGRMKINAFLMAIMVGNGCNAGAFSPIAPTGIVA
                     NQLMAKAGIVGMEWQTYWNTFITQSFVAFAGYFLLGGTKLLLRHERVDAATQLPPEDL
                     EPFTRSQWLTLGVLGAMLLAVIFLQTDVIVPAFVGIAILALTRAADPEAAIKAVPWGT
                     VLMVCGVSTLVSLLEK"
     gene            complement(969..1193)
                     /locus_tag="VE844_22390"
     CDS             complement(969..1193)
                     /locus_tag="VE844_22390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03988.1"
                     /translation="MLPKPQGLPLGRPKGAKAKKMKLDEHRETIISYLKKGVSKLSIA
                     KIIECSPSILYAWIDRNRLENYGRRKGQNP"
BASE COUNT          299 a          413 c          384 g          262 t
ORIGIN      
        1 tcttctccag caacgacacc agagtcgaga ccccgcacac catgagaact gtaccccacg
       61 gaaccgcctt gatggcggct tcggggtcgg cggcccgggt gagtgccagg atggcgatgc
      121 ccacgaacgc ggggacgatg acatccgtct gcaggaagat caccgcgagc agcatcgcgc
      181 cgagcacacc gagcgtcagc cactggctgc gcgtaaaggg ctcgaggtcc tccggaggaa
      241 gctgcgtcgc tgcatcgaca cgctcatgcc gcaacaggag ctttgtgccg cccaatagga
      301 aatatccagc gaacgccacg aacgactggg tgataaaggt gttccaataa gtctgccact
      361 ccatccccac gatgcccgcc ttcgccatga gctggttcgc cacgatccct gtcggtgcga
      421 tgggcgagaa agcgccggcg ttgcaaccgt tgccgaccat gatggccatg aggaaggcat
      481 tgatcttcat ccgtccggcc gccgccatgg caacgggtgc gatgagcgcg atggccgtga
      541 tattgccacc acccagggtg gcgatagcga ccgacaggcc aaaaaagagg atcgggacca
      601 tcccgatgtt gccgcgtgcc agccggatgc tgtgtcgcgc gagcttatta agcgtcccgt
      661 tcacctgagc ctgcccgaac agcaacagga tcgcgacaag gaccaggaac agctgcgttg
      721 gaaatcccac ggtcacttgg gacacccgca ggttgccgaa gcccgtacct acaacgaacg
      781 cggcagcgaa gctcaacaag cccacgttca cgcggcatat gatcccgacg accacggcaa
      841 cgaccaaggc accgagcgag atccaggcga ggttcatgcc tgtgcttcgt gcttccgtag
      901 cgcctctgtg ccggaaagca tcatatcagc gcggcgattt tcccagcgga gatataccca
      961 ctcgttaatc atggattctg acccttcctt cgcccgtagt tttctagcct attccggtca
     1021 atccacgcat agaggatcga gggggagcat tcaatgatct tggcgatgga aagtttgctg
     1081 acccctttct tcaagtagct gataatcgtc tcccgatgct catcgagctt catcttctta
     1141 gccttggctc ccttgggcct ccctaacggc agtccttggg gtttaggcag catcggcgca
     1201 aatttctact ctaacgtatt gtacgaataa ttagctgggc aatgcgagat cgctgaagtc
     1261 gtaagcgcca tggaccagga tgtttttaaa ccagagcggc gatatccgcg ccaagtcgtc
     1321 attatcgact gggtaaccct gcgcgcgcag ggtttgca
//
LOCUS       DASQSL010002234         1569 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_178302, whole genome shotgun sequence.
ACCESSION   DASQSL010002234 DASQSL010000000
VERSION     DASQSL010002234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1569
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178302"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            357..1265
                     /locus_tag="VE844_22395"
     CDS             357..1265
                     /locus_tag="VE844_22395"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:NF013045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HZC03989.1"
                     /translation="MEIKRPNLPEKRPIITAERVVQKNDPRRAPDVLAHYTGLPKARI
                     KEAMGKGAVWLKRGGRRPMRLRRVTTTLKAGDRLALYYDSAVLSTDPPKARCLCDFVR
                     YSAWHKPAGLMVEGSRFGDHATLARQAELHFGRPVYLVHRLDREASGILLVAHKPQAA
                     ARLSILFRERQLAKEYRIEVRGDLRQRGAQGRITVPLDGKETVTEYEVIEYGPERDVT
                     CARVLMRTGRYHQIRRHFEGIGFPLMGDPKYGRGNADPRGMQLTAVGLQFTCPWTGEC
                     IELRVEDPQDPIREPGRPYPDRHRSA"
     gene            complement(1315..>1569)
                     /locus_tag="VE844_22400"
     CDS             complement(1315..>1569)
                     /locus_tag="VE844_22400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002811309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03990.1"
                     /translation="LLHEIIVDELAHVGQRRNFIGPVGIKFAQVLIPPMFRMFFQDIP
                     ESRYLFDLKQMIGDGLAFDYNKVLPALLERSWVPSYCQPT"
BASE COUNT          353 a          461 c          439 g          316 t
ORIGIN      
        1 cgccgccggg ggcgccctct gatgacctcg atacacgcag cccattgcgt cggctgccaa
       61 tacgccgccc ctgtgatcag gggagcgatc gcttgcgcca tcagcttcca cgggcgccac
      121 catgtcgctt gccggggttg atctaaataa cgtgagttcg acgtaagatt tgacgcttta
      181 aaatcaaaag cttataaaac cacaagatca tggtctaaat cggtaagtaa ttgatcttta
      241 aataaagtca cttttctgcg tatcgttatg tcgaactcac gttagattat gatcgcgcga
      301 taaatgccat aactcaagct acggatctgt aaaagccccg cacaggggat ccgaacatgg
      361 agataaagcg tcctaatctc ccagagaagc gcccgatcat cactgccgaa cgggtggtgc
      421 agaagaacga tccacggcgc gctcccgatg tgctcgcgca ctacaccggg ctaccgaagg
      481 ctcgcatcaa ggaggcgatg ggcaaaggcg ctgtatggct taaacgcggc gggcggagac
      541 ctatgcgcct gcgccgtgtc accaccaccc tcaaagcggg tgatcgcctc gcgctctact
      601 atgactccgc agtgctttca accgatccgc ccaaggcacg gtgcttgtgc gacttcgtcc
      661 gctacagcgc ctggcataag cccgcaggtc tcatggtcga gggctcgcgt ttcggtgatc
      721 atgcgaccct cgcacggcaa gcggagctac acttcggccg tcctgtgtac ctcgtgcatc
      781 gtttggatcg cgaggcctcc gggatcctgc tggtcgcaca caaaccccaa gccgcagcgc
      841 gcctctcgat cctgttccgc gagcgtcagc ttgcgaagga gtaccggatc gaggtgcgcg
      901 gcgatctgcg ccagcgaggc gcacaaggac gtatcactgt gccgctcgat ggcaaggaaa
      961 ccgtcaccga gtacgaggtg atcgagtatg gccccgagcg cgacgtcacg tgtgcccgag
     1021 tgcttatgcg tacaggccgt tatcatcaga tccggcgcca cttcgagggg ataggcttcc
     1081 cgctgatggg cgatcccaag tatggacggg gcaatgccga cccaaggggt atgcaactta
     1141 ctgccgtcgg tcttcagttc acgtgtcctt ggaccggcga gtgcattgag ctgcgggttg
     1201 aagacccgca agacccgatc cgcgaaccag ggcgtcctta tccggacaga catagatctg
     1261 cttaacggct caagggtttg ggcaaactat ccgatcttac cgacagacac catgctatgt
     1321 cggctggcaa tagctaggca cccaactgcg ctccaggagc gcaggtaata ccttgttata
     1381 atcaaaggcc agtccatcgc cgatcatttg cttcagatcg aacagatagc ggctttccgg
     1441 tatatcctga aaaaacatcc ggaacatcgg cgggatgagg acttgggcaa actttatacc
     1501 gacgggtccg atgaaattgc ggcgctgacc cacgtgcgca agctcatcca cgatgatttc
     1561 gtgcagcaa
//
LOCUS       DASQSL010002235         1232 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_178397, whole genome shotgun sequence.
ACCESSION   DASQSL010002235 DASQSL010000000
VERSION     DASQSL010002235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1232
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178397"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            214..969
                     /locus_tag="VE844_22405"
     CDS             214..969
                     /locus_tag="VE844_22405"
                     /inference="COORDINATES: protein motif:HMM:NF024139.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HZC03991.1"
                     /translation="MDDIPYKRKDLLSTEDVARYFGVGQMTVYRWCKEGRLQCIKLGK
                     QWRIRREALEDFLSQHERSTTLVGRLSSFLRVPDNVLAIAQNIDILHRLDAAFFRVGD
                     ARGGLLVKFYGGEEKSEDELSARFENNGLEVGRLKQEGRFLMKAEEDPLYGRGDALRR
                     LIEEAAVEGRTVWASFDWVRQVDLSTALEQQERLTELVDSRQLVVKTATLGEVTDQWP
                     SSALRQGQSLHSCTILASESGLSLSRSTPMPPS"
BASE COUNT          285 a          336 c          362 g          249 t
ORIGIN      
        1 cccgtgaatc tatcgctgcg gttctccata ggtgcgatct ctcctcgcgt agtggtctca
       61 acctagcgcc atgcggcact tggtaattcg ctgctgagtg tatgctctaa tgactaccaa
      121 agtaaactat tgtaaagaaa actttacaat agtagcctca aaatggccca aaagttgcag
      181 gtatcaagga ggtaatgggt aataatgaga ggcatggacg atattcctta caaacggaag
      241 gacctgctga gcaccgagga tgttgcaagg tacttcgggg tgggtcagat gacggtctac
      301 cgctggtgta aggaggggcg tttgcagtgc ataaagctcg gcaaacaatg gcgcatccgt
      361 agagaggcac tggaggactt tctcagccaa cacgagcgct cgaccacact cgttgggcgg
      421 ctgagctcct tcttgcgggt gcccgacaac gtgctggcga tcgctcagaa catcgacatt
      481 ctgcaccgcc tggacgcagc gttcttccgt gtcggcgacg cgcggggcgg gctgttagtg
      541 aagttttacg gcggcgagga gaaatccgag gacgagctga gcgcccggtt tgagaataac
      601 ggcctggagg ttggacgcct aaagcaggag ggacgtttcc tcatgaaagc cgaggaagac
      661 cctttgtacg gacggggtga cgcgctcagg cggctcatcg aggaggcagc cgttgagggg
      721 cgcactgtgt gggcctcctt cgactgggtc aggcaggtag acctgagtac agccctggag
      781 cagcaagaga gattgaccga gctagtcgac tcccgccagc tcgtcgtcaa gacggccacg
      841 ctcggagagg tgactgatca gtggccctcg tcggcgctta ggcagggcca gtccctgcac
      901 tcgtgtacga ttttggcttc cgagagcggc ctatcgctta gccgctcaac gccgatgccg
      961 ccttcctaag ggtactcaaa gcgatcctcg caaaccttcc cgctgtcggc gataccacaa
     1021 gtgcccgagg gagctctggc aactcggcag ggcgactcat ctcttcgaag taaccctcgg
     1081 aactaaacgg cttccctacc accagcatct tcttcacctt acatgctcaa agtcagaagt
     1141 gacaccaacc tgacaccagc ccagacgaac aacggcgaac acgggcgaca gcaggctcag
     1201 ataaatatgc ttatttgcag gtatttctga ac
//
LOCUS       DASQSL010002236         1014 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_178400, whole genome shotgun sequence.
ACCESSION   DASQSL010002236 DASQSL010000000
VERSION     DASQSL010002236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178400"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..559)
                     /locus_tag="VE844_22410"
     CDS             complement(<1..559)
                     /locus_tag="VE844_22410"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HZC03992.1"
                     /translation="MPLLLISLMAHALGCARQFPTTKVTPIKAANPAELQRYLLSRPD
                     VAQFRFRGPFDMVERRELEIPLDSDLTVQADLYLCAAASKAPLVIVLHGNNNSKEDHA
                     FQAMHLASWGMHGLALDLPKRGPWIANGRTLAKLVDTIHRTPQLVDGRIDADKIILVG
                     HSFGATAVATALGEGVPALGGVLLDP"
BASE COUNT          221 a          260 c          321 g          212 t
ORIGIN      
        1 tgggatcgag caagacaccg cccagcgcag ggacgccttc ccctaaagcg gtggcgacgg
       61 cggtggcgcc gaatgagtgg ccgacgagaa tgatcttgtc cgcgtctatg cggccatcga
      121 cgagctgcgg cgttcgatga atggtgtcga cgagcttggc aagggttctg ccattggcga
      181 tccacgggcc gcgtttgggc aagtcgaggg cgaggccatg catgccccag gaggccaagt
      241 gcatcgcttg gaaggcatgg tcctccttgg aattgttgtt tccgtgcaac acgatgacca
      301 gaggcgcctt gctggccgcg gcgcacaggt ataagtccgc ctggaccgtc agatcggaat
      361 ccagggggat ttccagctcc ctgcgctcga ccatgtcgaa gggcccgcga aacctgaatt
      421 gcgctacgtc gggacgggac agcaaatagc gctggagctc ggcgggatta gctgccttta
      481 tcggtgtaac tttagtcgtc ggaaactggc gggcacaacc gagcgcatgc gccatcaagg
      541 aaatcagcag caggggcaac aggctgttgg aaacggccca cctgctgcgt tgcgctccga
      601 tggactcgct cgacgtacga aaagagtacg cctgcggtcg tccattctcg cgcgccttgc
      661 atctggaccg ttttgagcag cctggaatca gttgcatcgc tctaggggtc caattggaaa
      721 cagcgtatac aaggataaag gcgaaaggat aaaggataaa ctaagtacga gtttttgttc
      781 tttcatcctt ccatccttta aacatgttgc cccttaatcg aaaagtttga cataagatgt
      841 tgagtgggga aaggtacgac gagatggaac ggtccgaaga gatggtgctc agggtgtgca
      901 accggccatg aaactttttc cgatgattgc tcgggttcag aagagaggcc gtgaaagtcg
      961 cggagtctta ctggtcactg cgctgatttt ggcaggcctc gttggcgccg cggc
//
LOCUS       DASQSL010002237         1426 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_178442, whole genome shotgun sequence.
ACCESSION   DASQSL010002237 DASQSL010000000
VERSION     DASQSL010002237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1426
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178442"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(220..756)
                     /locus_tag="VE844_22415"
     CDS             complement(220..756)
                     /locus_tag="VE844_22415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014561137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HZC03993.1"
                     /translation="MANLKLGDEAIAFELPGVDDRHHALADYADKEAVALIFTCNHCP
                     YARAWEDRIIGIQADYADRGVQVIAISANDPEKYPADSFPKMKERAQEKGFNFPYLFD
                     ESQEVARAYGAERTPEVFLFRKDGTLLYHGTVDDNYEDPKAVKNHYLRDALDAALANE
                     EQPPVAETRPIGCTIKWR"
     gene            complement(849..1181)
                     /locus_tag="VE844_22420"
     CDS             complement(849..1181)
                     /locus_tag="VE844_22420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2703 domain-containing protein"
                     /protein_id="HZC03994.1"
                     /translation="MHVSFLYYEDCPSHELALERLREVLAEEGIDTDVEVVEVESEEQ
                     ARQLLFIGSPTILLNGLDIDPPPPDSRYALTCRAYRLEDGRFSPLPSPDTIRRAIDDT
                     EKAEPSDG"
BASE COUNT          292 a          395 c          411 g          328 t
ORIGIN      
        1 aacgtctgga tcacgcctaa gggcctcacc aaggtcgtcg gcgcggcctg ggacggggac
       61 caagcgatca aggtggtcta cgaggagagc gacggggcgg tggcagaagc aaggagaagg
      121 agcggtagca tccgtcggtg agcacgacca tgaaatttcg tgctcgggaa gcaaccaccc
      181 aagactccca catcagggga ccaatcgctt ataagctttc tacctccact ttatcgtgca
      241 gccgatgggt cgggtctcgg ctactggagg ttgttcttca ttagccaggg ccgcatcaag
      301 agcatccctg aggtagtggt tctttacggc tttaggatct tcgtagttgt cgtcgacggt
      361 gccgtggtag agcagcgtgc catccttcct gaagaggaac acttcggggg tgcgctccgc
      421 cccgtacgcc cgagctacct cctgcgactc atcgaagagg taaggaaagt taaacccctt
      481 ctcttgcgcg cgctccttca tcttggggaa actgtcagcg gggtactttt ctgggtcgtt
      541 ggcgctgata gctatgacct gcacgcccct gtccgcgtag tcggcctgga tcccgattat
      601 gcgatcctcc cacgcccggg cgtaggggca gtggttgcag gtgaagatga gtgccacggc
      661 ctccttatcc gcgtaatccg cgagggcgtg gtgccgatca tccaccccgg gtagttcgaa
      721 agctatcgcc tcgtcgccga gtttgaggtt ggccacttct tctgctcctt tctcgtagca
      781 tacatcgtga acggtcgtgt ctactgtcta taatagacag cctaccgtag acagcctatc
      841 gctatcccct agccatcgct tggctcggcc ttctctgtgt catctatggc ccgccgaatc
      901 gtgtccggtg aaggtagcgg ggagaagcga ccgtcctcta ggcggtaggc gcggcaggta
      961 agggcgtagc gagaatcggg cggcggagga tctatgtcta ggccgtttag gagtatggtg
     1021 ggagagccaa tgaaaagtag ctgtcgagct tgctcctcgc tctcgacctc gacgacctcg
     1081 acatcggtat cgatgccctc ctcagccaac acctcgcgca gacgttcgag cgccagctcg
     1141 tgagatgggc agtcttcata gtacaggaaa ctgacgtgca tcaaaaaccg cttcaggttt
     1201 gcctactact actccctata agtgtccttc tctcatataa cacaatcagg gttaagagac
     1261 ggaattggag gtcacctatt ttcaaaccgc cgatcaatcc gatcattacc tctgcaaggc
     1321 tagtgttagg cttagatagg cctctttggt gatcggttgc ttgccaatca gggtctagtg
     1381 tcctcgaccc tatatcggaa gctgatctta aaggaggact accgag
//
LOCUS       DASQSL010002238         1123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_178446, whole genome shotgun sequence.
ACCESSION   DASQSL010002238 DASQSL010000000
VERSION     DASQSL010002238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178446"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(138..281)
                     /locus_tag="VE844_22425"
                     /pseudo
     CDS             complement(138..281)
                     /locus_tag="VE844_22425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611928.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            complement(400..867)
                     /locus_tag="VE844_22430"
     CDS             complement(400..867)
                     /locus_tag="VE844_22430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03995.1"
                     /translation="MTDQAIQLKSVTKPTVERPDPEVPEKAQRRQFSAAYKQRILEEA
                     NRCTELGQIGALLRREGLYSSHLSTWRSQRTQALAAQRRGRKPSAPFGPAERIAELER
                     DNERLHQQLEQAQAIIEVQKNSPSCWCRWRAGAGDADERGNHLGPAGGRCERL"
BASE COUNT          217 a          329 c          314 g          263 t
ORIGIN      
        1 tatgtggctt tcacgtgagt tctaactttg ctttacggta aaagccttga caaaggttga
       61 gtattacaag ttatattctt ttgaaatcag aggcttataa aaagtgtcct gacatcaggg
      121 tggcgacacg ggttgggccg ctcgcgcacc tcctcagcct cagctaggat acggtacatc
      181 gtgcgcaccg agcacaggta ctggccttcg tcaagcaggg tggcgtagat cgcgggtggc
      241 gcctggtcga caaagcgctc tgagtgcagg agctccagca cctgctggcg ttcggcctca
      301 ctcaaggccc gtggggagcg ggaccgcatc gctgataggg acgggttatc gtcccgggct
      361 tggtagcggt agtaactcgc tcgggctacg cccagcacct cacaggcgtt cacaacgccc
      421 acccgcgggg ccaagatggt taccgcgttc atcagcgtct cccgctccag ctcgccaccg
      481 gcaccagcag ctcggagagt ttttttgaac ctcgataatc gcctgcgcct gctctaactg
      541 ctgatgcaag cgctcattgt cgcgctccag ctcggcgatc cgctcggccg gcccgaatgg
      601 ggccgagggt ttccgtcccc gccgctgggc cgccaaggcc tgcgtgcgct gactgcgcca
      661 ggtgctcagg tgtgacgaat acaacccctc tcgacgcagc agtgccccga tctggcccag
      721 ctcagtacag cggttggctt cctccagaat gcgctgtttg taggcggcgc tgaactgccg
      781 gcgttgggcc ttttcgggca cttccggatc gggtcgttcg accgtcggct tggttacgct
      841 tttcagttgt atggcttgat ctgtcattgg tgattaacct ccccgcccta cactaatttt
      901 acagtggcga agtgtctcac tcatattggc acagaggggg ggccttgtct cggtaggtgt
      961 ttctgaccca taatactaca ggatcgtgag cacagcatta tctctataac actaccctca
     1021 gcagagcttg gctcaaatgt gacattggca agttagtcga ttaatgaaat ccaccagagg
     1081 ttaacccaaa gcacacttca taggatctat ccgcttccta tcc
//
LOCUS       DASQSL010002239         1276 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_178490, whole genome shotgun sequence.
ACCESSION   DASQSL010002239 DASQSL010000000
VERSION     DASQSL010002239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1276
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178490"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1276)
                     /gene="argS"
                     /locus_tag="VE844_22435"
     CDS             complement(<1..>1276)
                     /gene="argS"
                     /locus_tag="VE844_22435"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR00456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HZC03996.1"
                     /translation="GVALVDPPRTIVVDYSSPNVAKEMHVGHLRSTVIGDTLVRVLRF
                     LGHTLIPQNHVGDWGTQFGMLIQHMLDTGARAGGEYRVNDLNVLYQAAKRRFDEDSRF
                     AEAARERVVKLQEGETETRALWRELVAESVRHFAEVYERLEIPLTPQDIRGESSYNAD
                     LPVVIAELEQLGLAHESQGALVVYPPGFKDRQGEPLPMIVRKADGGYLYATTDLAAAR
                     YRVNVLGADRLIYVTDARQKDHFAMLFAVLRETGWAPEDVMLNHVAFGSVLGKDRKPF
                     KTREGGTIRLVDLIDEAERRAAGILREKDPDLAVEEREKIAHVLGIGALKYADLCNDR
                     IKDYVFDWDRMLAMDGNTAPYLQNAYVRICSIFRRAGLDPDAYVIEHIRVQDPLERRL
                     LLCLLRFPHTIGLVAERLEPHLLGNYLYELASE"
BASE COUNT          294 a          392 c          334 g          256 t
ORIGIN      
        1 attcacttgc cagctcgtag aggtaattac ccagcagatg gggttccaga cgctcagcga
       61 ctaagcctat ggtatgcgga aagcgcagca agcacaataa taatctccgc tccaaagggt
      121 cctggacacg gatgtgctca ataacgtacg catcgggatc aagccccgct cttcgaaaga
      181 tagaacaaat gcgcacataa gcattctgga gataaggcgc cgtattgcca tccatagcca
      241 acatccggtc ccagtcgaac acatagtcct tgatccggtc attgcataga tcggcatatt
      301 tgagtgcgcc gatccctagc acatgggcaa ttttctctcg ctcttctacg gccagatccg
      361 gatccttttc tcggaggatc ccggcagccc ggcgctccgc ttcgtcgatc agatccacga
      421 gccggatcgt gccgccttcg cgggtcttga agggctttct atccttaccg agcacactgc
      481 cgaaggctac atgattgagc atgacatctt caggcgccca tccggtctcg cgcagcaccg
      541 caaataacat agcaaagtga tccttttgcc tggcatcggt cacatagata agccgatcgg
      601 cgcccaatac gttcacacgg tagcgggcgg cagccagatc cgtggtggcg tacagatagc
      661 ccccatcggc cttgcgcacg atcatgggca gaggctcgcc ctggcgatcc ttaaagcccg
      721 ggggatagac aaccagcgcc ccctggcttt catgggcaag gccgagctgc tcaagctccg
      781 cgatcaccac gggcagatcc gcattatagg aactctcgcc gcggatatcc tgcggggtca
      841 aggggatctc cagacgttca tagacctcgg cgaaatggcg tacgctttcg gctacaagtt
      901 cccgccacag tgcccgtgtc tcagtctccc cctcctgcag cttcacaacc cgctctcgag
      961 cggcttcggc aaaccggctg tcttcatcaa agcgcctttt ggcggcctga tagagaacat
     1021 tgaggtcatt gacccgatat tcgccgccgg ctcgggcacc ggtatccagc atatgctgga
     1081 taagcatgcc aaactgggta ccccaatccc caacatggtt ctggggaata agcgtatgac
     1141 ccagaaagcg aagcacacgg accaaggtat cgccgatcac ggtcgagcgc agatgtccga
     1201 catgcatctc cttggcgaca ttcggactgg aataatcgac tacgatagta cggggcggat
     1261 cgaccagggc cacacc
//
LOCUS       DASQSL010002240         1496 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U10908
            k141_178506, whole genome shotgun sequence.
ACCESSION   DASQSL010002240 DASQSL010000000
VERSION     DASQSL010002240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37946385
            Sequence Read Archive: SRR5918978
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 18:42:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,490
            CDSs (total)                      :: 4,366
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 124
            rRNAs                             :: 4, 26, 57 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1, 25, 57 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 50 of 166
            Pseudo Genes (incomplete)         :: 110 of 166
            Pseudo Genes (internal stop)      :: 28 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1496
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178506"
                     /isolate="SMAG_U10908"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /lat_lon="31.86331667 S 126.9831 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            303..385
                     /locus_tag="VE844_22440"
     tRNA            303..385
                     /locus_tag="VE844_22440"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:338..340,aa:Leu,seq:gag)
     gene            complement(525..884)
                     /locus_tag="VE844_22445"
     CDS             complement(525..884)
                     /locus_tag="VE844_22445"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HZC03997.1"
                     /translation="MLRKHKAHQAELKLVNRAYYHDHGLVFAEEWEHLQRHGDTLGHP
                     LQMNSIGQHEYLRLIKPAGLRHTCATLLLRAGVPVKVVQERLGHKRIEITLNIYARAL
                     PSTQHGAAANLAALLHS"
     gene            complement(1007..>1496)
                     /locus_tag="VE844_22450"
     CDS             complement(1007..>1496)
                     /locus_tag="VE844_22450"
                     /inference="COORDINATES: protein motif:HMM:NF026010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HZC03998.1"
                     /translation="EYVEPSKMTVGEWLSEGLEAAIKPPNKRLRTYEIYNSVIERHLK
                     PALGHVRLQQLKPTQLKRHYNDSSLSPGTLEQHHTLVHSALKAAQLQSLVQRNVAALV
                     IGKPHRPEGHEDVLQHCREGGEAIHYSGQRTEATAGRLLHAGVRYGRAEGRTVRTQVA
                     RY"
BASE COUNT          294 a          444 c          442 g          316 t
ORIGIN      
        1 tacgtcgttg gttctggcga tcttttcttc gcagtatgtc ggggggtcgg tgatcttgac
       61 gtcgccgccg ccaaagccga ctacggcccc ggtgccgacg ccatccgggg ctgagccgac
      121 ggcgccgagt acgccaagcg cacccgagag tacaggcacc gttgaaaccc ctcctgccca
      181 aagtggggac ccggaaccga cccagcagga gcagaagtag gcaatgctga tacctcgtgg
      241 cgcgagcgag gatcgccaac atcctctcga caagggatct ttcccaaact gacctcttgt
      301 gagccgaagt ggtggaattt ggtagacacg ccatcttgag ggggtggtgg ggcaacccgt
      361 gggggttcga gtcccccctt cggcactgtt gagaaaatac ccctgagaat tcagggaatt
      421 agaaggtcta aaaggtacgt tagctaacga atagcgaacg agcacgaaaa accgagcatg
      481 gggctgtcat acggcggccc ctttttttat cggctttcag gcagctagga gtgcaggagc
      541 gccgccaggt tcgctgccgc accgtgttgc gtcgatggca gggcacgggc ataaatgttc
      601 agcgtgatct cgatccgctt atggcccagg cgctcctgca ccactttgac aggtacacca
      661 gcccgcagca gcaatgtcgc acaggtatgc cgcaagccag ccggtttgat cagacggaga
      721 tactcgtgct gcccgatgct attcatctgg agcggatggc ccaaggtgtc gccatgccgc
      781 tgcaggtgct cccactcctc ggcgaataca agcccatgat catgataata ggcccgattc
      841 acaagtttga gctccgcctg gtgtgccttg tgcttccgga gcaatgccgt agcctccggg
      901 gcaattgaga tcgtgcggct cccccccgtt tttcaggggg ccgcagactg gtcgagggcc
      961 aggcttgatg agctgccgca caatcgccac gaccccagcg ttcagatcaa tatcgggcca
     1021 cttgagtccg cacagttctc ccttccgcgc gcccgtatct aacgccagcg tgtaaaaggc
     1081 ggccggctgt agcctcagtt ctttggccgc tgtaatgaat tgcctcgcct ccttcccgac
     1141 aatgctgcaa cacatcctcg tgaccttccg gccggtgcgg cttaccgatg actagggctg
     1201 ccacattacg ctgcaccaaa ctttgcaact gcgcggcctt tagcgcactg tgcaccaagg
     1261 tatgatgctg ctcgagtgtg cctggagaga gcgatgagtc attgtagtgc cgcttgagct
     1321 gtgtgggttt gagctgctgc agacgcacat ggccaagggc cggcttcaga tgccgttcga
     1381 tcacgctgtt gtagatctca taagttcgga ggcgcttatt cgggggcttg atggcggctt
     1441 ccaacccctc gctcagccac tcgcctacgg tcattttgga gggctcgaca tactcg
//
